Query psy3823
Match_columns 365
No_of_seqs 165 out of 2108
Neff 10.5
Searched_HMMs 29240
Date Fri Aug 16 18:17:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3823.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3823hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rik_A Titin; I-SET IG fold, p 100.0 2.9E-37 9.7E-42 270.0 29.8 278 10-317 4-283 (284)
2 3b43_A Titin; I-SET IG fold, e 100.0 1E-36 3.5E-41 292.2 34.1 289 4-321 189-479 (570)
3 3b43_A Titin; I-SET IG fold, e 100.0 4.7E-37 1.6E-41 294.6 30.0 285 4-317 283-569 (570)
4 1qz1_A Neural cell adhesion mo 100.0 6.1E-35 2.1E-39 256.0 26.6 276 16-318 6-290 (291)
5 2yd9_A Receptor-type tyrosine- 100.0 1.5E-34 5.3E-39 255.3 25.9 285 10-320 5-293 (304)
6 2wim_A N-CAM 2, NCAM2, neural 100.0 1.7E-34 5.8E-39 253.2 22.2 274 16-320 8-286 (291)
7 3laf_A Deleted in colorectal c 100.0 2.2E-33 7.5E-38 257.5 26.7 279 6-319 116-402 (403)
8 2y25_A Myomesin; structural pr 100.0 2.4E-34 8.1E-39 255.3 13.8 289 8-319 4-316 (317)
9 2ec8_A MAST/stem cell growth f 100.0 4E-32 1.4E-36 257.9 29.0 291 5-321 108-414 (524)
10 3laf_A Deleted in colorectal c 100.0 7.3E-32 2.5E-36 247.4 29.2 275 13-320 22-313 (403)
11 3dmk_A DOWN syndrome cell adhe 100.0 7.2E-32 2.5E-36 269.2 29.2 287 6-320 423-715 (816)
12 1e07_A Carcinoembryonic antige 100.0 7.6E-32 2.6E-36 262.1 28.6 267 4-319 373-641 (642)
13 3kld_A Contactin 4, axcam, BIG 100.0 2E-32 6.7E-37 249.9 22.7 269 19-318 109-383 (384)
14 3oq3_B IFN-alpha/beta binding 100.0 5.4E-32 1.9E-36 241.8 24.9 272 11-316 28-328 (329)
15 3p3y_A Neurofascin; IG domains 100.0 1.1E-32 3.7E-37 252.9 20.9 290 4-317 108-402 (404)
16 2y23_A Myomesin; structural pr 100.0 4.4E-32 1.5E-36 240.1 21.4 283 18-316 7-310 (312)
17 1itb_B Type 1 interleukin-1 re 100.0 2.3E-33 7.7E-38 249.0 13.0 277 19-317 12-313 (315)
18 2v5m_A Dscam; neurobiology SPL 100.0 1E-31 3.6E-36 245.2 24.0 284 10-320 2-308 (388)
19 1cs6_A Axonin-1; neural cell a 100.0 6E-32 2E-36 246.3 21.3 278 7-317 96-381 (382)
20 1e07_A Carcinoembryonic antige 100.0 5.4E-31 1.8E-35 256.1 28.5 263 4-315 195-459 (642)
21 3kld_A Contactin 4, axcam, BIG 100.0 4.9E-32 1.7E-36 247.3 19.6 270 25-320 21-296 (384)
22 1bih_A Hemolin; insect immunit 100.0 2.6E-31 8.9E-36 243.1 24.4 270 19-316 107-394 (395)
23 3ejj_X Macrophage colony-stimu 100.0 5.5E-31 1.9E-35 230.6 25.4 275 12-319 4-282 (289)
24 3qs7_E FL cytokine receptor; i 100.0 3.8E-31 1.3E-35 243.8 25.3 263 19-320 55-325 (423)
25 4dep_C Interleukin-1 receptor 100.0 1E-32 3.5E-37 248.4 14.4 280 17-318 12-333 (349)
26 3p3y_A Neurofascin; IG domains 100.0 2.5E-32 8.4E-37 250.5 17.1 290 8-320 13-313 (404)
27 4fqp_A Poliovirus receptor; im 100.0 3.4E-31 1.2E-35 234.9 23.7 271 19-321 7-307 (313)
28 1cs6_A Axonin-1; neural cell a 100.0 9.8E-32 3.4E-36 244.9 19.3 282 9-320 2-295 (382)
29 2o26_X MAST/stem cell growth f 100.0 4.4E-31 1.5E-35 231.5 22.6 271 10-319 11-289 (290)
30 4fom_A Poliovirus receptor-rel 100.0 9.7E-32 3.3E-36 237.7 18.4 270 22-320 9-302 (308)
31 1ry7_B FGFR-3, fibroblast grow 100.0 4.6E-33 1.6E-37 249.0 9.6 287 18-320 14-329 (334)
32 2ec8_A MAST/stem cell growth f 100.0 4.7E-31 1.6E-35 250.5 22.7 279 10-319 210-511 (524)
33 3qs9_E FL cytokine receptor; i 100.0 6.9E-31 2.4E-35 248.4 23.7 268 5-317 223-509 (527)
34 2jll_A NCAM2, neural cell adhe 100.0 1.7E-29 5.7E-34 230.6 31.4 301 20-354 8-384 (389)
35 2v5m_A Dscam; neurobiology SPL 100.0 7.8E-31 2.7E-35 239.4 22.0 274 5-316 97-387 (388)
36 1bih_A Hemolin; insect immunit 100.0 1.2E-30 4.2E-35 238.6 21.7 290 8-320 3-309 (395)
37 3u83_A Poliovirus receptor-rel 100.0 2.9E-30 9.9E-35 230.5 23.3 277 12-319 14-321 (331)
38 3qs7_E FL cytokine receptor; i 100.0 5E-31 1.7E-35 243.0 18.8 269 4-319 133-415 (423)
39 3rjd_A High affinity immunoglo 100.0 1.3E-29 4.3E-34 218.6 26.3 237 19-308 8-249 (262)
40 2wng_A Tyrosine-protein phosph 100.0 2.7E-30 9.4E-35 230.5 22.8 269 15-308 6-309 (327)
41 4dkd_C Macrophage colony-stimu 100.0 3.5E-31 1.2E-35 232.2 16.7 272 10-319 3-282 (292)
42 3qs9_E FL cytokine receptor; i 100.0 6.5E-31 2.2E-35 248.6 18.7 274 20-335 147-442 (527)
43 3o4o_C Interleukin-1 receptor 100.0 3.8E-32 1.3E-36 243.6 9.7 278 18-319 24-336 (339)
44 1wio_A CD4, T-cell surface gly 100.0 3E-30 1E-34 233.6 20.5 251 20-317 2-292 (363)
45 3dmk_A DOWN syndrome cell adhe 100.0 6.9E-30 2.4E-34 254.9 24.8 280 5-319 521-810 (816)
46 2rcj_C Light chain; immunoglob 100.0 9.5E-29 3.3E-33 234.6 30.0 280 18-316 6-314 (523)
47 3vh8_G Killer cell immunoglobu 100.0 3.3E-29 1.1E-33 222.4 23.2 265 22-319 33-314 (316)
48 3mjg_X Beta-type platelet-deri 100.0 3.5E-29 1.2E-33 219.2 22.6 263 19-319 7-279 (289)
49 2rcj_C Light chain; immunoglob 100.0 1.3E-28 4.4E-33 233.7 26.3 272 22-315 124-417 (523)
50 1qgc_4 Protein (immunoglobulin 100.0 1.1E-27 3.7E-32 222.2 31.8 297 19-339 8-368 (438)
51 2oz4_A Intercellular adhesion 100.0 8.1E-29 2.8E-33 214.3 19.8 243 23-318 14-264 (265)
52 2ocw_A Polymeric-immunoglobuli 100.0 1.4E-27 4.7E-32 229.6 29.4 270 20-320 225-548 (585)
53 2ocw_A Polymeric-immunoglobuli 100.0 5.1E-27 1.8E-31 225.6 33.3 301 4-338 105-466 (585)
54 1z7z_I Intercellular adhesion 100.0 8.3E-28 2.8E-32 223.8 23.3 259 18-318 5-282 (450)
55 1z7z_I Intercellular adhesion 100.0 4.2E-28 1.4E-32 225.8 20.2 243 22-318 198-449 (450)
56 1wio_A CD4, T-cell surface gly 100.0 2.3E-28 7.8E-33 221.2 16.2 229 23-318 107-363 (363)
57 1qgc_4 Protein (immunoglobulin 100.0 1.2E-27 4E-32 221.9 16.7 266 25-314 129-435 (438)
58 2nzi_A Titin; IG-domain, FNIII 99.9 3.4E-26 1.2E-30 201.7 22.2 262 11-311 4-283 (305)
59 1za6_B IGG heavy chain; immuno 99.9 2.2E-26 7.5E-31 206.7 18.5 277 19-308 7-331 (344)
60 3v2a_R Vascular endothelial gr 99.9 1.2E-27 4E-32 237.3 10.2 270 21-318 233-549 (772)
61 1igt_B IGG2A intact antibody - 99.9 1.8E-25 6.1E-30 207.7 21.6 277 19-308 7-331 (444)
62 1iga_A IGA1; immunoglobulin; N 99.9 2.2E-24 7.4E-29 202.1 29.2 283 18-314 7-341 (475)
63 3v2a_R Vascular endothelial gr 99.9 6.3E-26 2.2E-30 224.9 18.3 281 4-317 116-418 (772)
64 2wqr_A IG epsilon chain C regi 99.9 2.1E-26 7.3E-31 204.9 12.3 259 28-307 25-309 (323)
65 2nzi_A Titin; IG-domain, FNIII 99.9 1.4E-24 4.9E-29 191.2 23.3 216 116-349 4-284 (305)
66 1igt_B IGG2A intact antibody - 99.9 2.5E-25 8.5E-30 206.8 15.8 270 24-307 135-434 (444)
67 2rik_A Titin; I-SET IG fold, p 99.9 1.3E-23 4.5E-28 183.1 25.0 190 114-321 3-194 (284)
68 2jll_A NCAM2, neural cell adhe 99.9 8.2E-24 2.8E-28 192.9 24.2 205 129-347 9-280 (389)
69 1hzh_H IGG, immunoglobulin hea 99.9 8.6E-25 2.9E-29 203.9 17.5 276 20-308 8-340 (457)
70 2yd1_A Tyrosine-protein phosph 99.9 2.5E-23 8.6E-28 173.5 21.8 191 115-319 5-201 (212)
71 2yd1_A Tyrosine-protein phosph 99.9 1.1E-23 3.9E-28 175.6 19.6 190 11-211 6-199 (212)
72 2c5d_C AXL oncogene, tyrosine- 99.9 1.9E-23 6.5E-28 171.8 20.5 178 116-318 2-193 (195)
73 1igy_B IGG1 intact antibody MA 99.9 8.6E-26 2.9E-30 209.3 7.1 276 20-308 7-321 (434)
74 2j8h_A Titin, connectin; cardi 99.9 1.5E-23 5.3E-28 172.5 19.9 184 116-317 4-196 (197)
75 2yd6_A PTPRD protein; hydrolas 99.9 8.4E-24 2.9E-28 176.4 18.5 192 10-211 5-203 (212)
76 1iga_A IGA1; immunoglobulin; N 99.9 3.6E-23 1.2E-27 193.9 24.3 269 25-307 139-443 (475)
77 2va4_A NCAM2, N-CAM 2, neural 99.9 4.6E-24 1.6E-28 174.8 16.0 174 129-317 13-192 (192)
78 2wv3_A Neuroplastin; igcam, me 99.9 2.4E-23 8.3E-28 170.5 20.2 170 131-317 13-189 (190)
79 1hzh_H IGG, immunoglobulin hea 99.9 2E-24 6.9E-29 201.4 15.2 272 24-308 144-444 (457)
80 2a38_A Titin; Z1Z2, structural 99.9 8.9E-24 3E-28 173.4 17.0 185 11-210 5-193 (194)
81 2a38_A Titin; Z1Z2, structural 99.9 1.3E-23 4.6E-28 172.4 17.8 186 116-317 5-194 (194)
82 3lcy_A Titin; A-BAND, IG tande 99.9 5.5E-23 1.9E-27 169.0 20.1 186 115-318 6-196 (197)
83 2yd6_A PTPRD protein; hydrolas 99.9 5.8E-23 2E-27 171.3 19.9 194 115-319 5-205 (212)
84 1rhf_A Tyrosine-protein kinase 99.9 3.6E-23 1.2E-27 168.1 17.8 173 16-210 6-181 (182)
85 2wv3_A Neuroplastin; igcam, me 99.9 1.5E-22 5.2E-27 165.7 20.9 177 10-211 2-189 (190)
86 2v44_A NCAM2, neural cell adhe 99.9 5.5E-23 1.9E-27 168.1 18.0 177 17-210 7-187 (189)
87 2iep_A Muscle-specific kinase 99.9 2.5E-23 8.6E-28 170.4 15.7 174 129-319 16-191 (192)
88 1igy_B IGG1 intact antibody MA 99.9 6.6E-25 2.2E-29 203.3 6.9 267 24-307 131-424 (434)
89 2iep_A Muscle-specific kinase 99.9 2.6E-23 8.7E-28 170.4 15.7 184 8-211 4-189 (192)
90 2c5d_C AXL oncogene, tyrosine- 99.9 4.3E-23 1.5E-27 169.7 17.0 174 18-211 8-192 (195)
91 3rbs_A Myomesin-1; immunoglobu 99.9 7.6E-23 2.6E-27 169.8 17.5 185 12-209 4-204 (207)
92 3lcy_A Titin; A-BAND, IG tande 99.9 2.8E-23 9.5E-28 170.8 14.7 189 8-211 4-195 (197)
93 1rhf_A Tyrosine-protein kinase 99.9 6.1E-23 2.1E-27 166.8 16.2 165 130-317 12-182 (182)
94 2v5t_A NCAM2, N-CAM 2, neural 99.9 1E-22 3.4E-27 166.4 16.6 175 129-318 11-188 (189)
95 1epf_A NCAM, protein (neural c 99.9 7E-23 2.4E-27 167.7 15.7 169 16-200 6-180 (191)
96 1epf_A NCAM, protein (neural c 99.9 2.4E-22 8E-27 164.5 18.8 174 129-317 11-190 (191)
97 2j8h_A Titin, connectin; cardi 99.9 6.5E-23 2.2E-27 168.8 15.5 187 11-211 4-196 (197)
98 4fa8_A Secreted protein BARF1; 99.9 3.9E-23 1.3E-27 170.8 13.5 165 22-202 3-193 (203)
99 2r15_A Myomesin-1; sarcomeric 99.9 1.8E-22 6.2E-27 168.0 17.5 185 132-319 14-211 (212)
100 2v44_A NCAM2, neural cell adhe 99.9 4.8E-22 1.6E-26 162.5 19.6 170 130-316 12-185 (189)
101 2yd9_A Receptor-type tyrosine- 99.9 2.1E-22 7E-27 177.5 18.6 189 114-316 4-199 (304)
102 1zvo_C Myeloma immunoglobulin 99.9 9.5E-21 3.3E-25 178.9 30.3 268 26-308 149-493 (512)
103 2v5t_A NCAM2, N-CAM 2, neural 99.9 8.2E-23 2.8E-27 166.8 13.1 175 19-211 9-187 (189)
104 3sgj_C Human FCG3A receptor; r 99.9 4.1E-22 1.4E-26 165.1 17.4 160 19-211 14-173 (204)
105 3b5h_A Cervical EMMPRIN, HAB18 99.9 1.3E-21 4.6E-26 159.1 19.8 167 131-318 9-183 (184)
106 1fnl_A Low affinity immunoglob 99.9 6.1E-22 2.1E-26 160.0 17.6 162 17-211 12-173 (175)
107 2v9r_A Roundabout homolog 1; p 99.9 8E-23 2.7E-27 170.1 12.5 191 11-228 9-208 (212)
108 2va4_A NCAM2, N-CAM 2, neural 99.9 1.1E-21 3.7E-26 160.6 19.0 179 12-210 3-191 (192)
109 4fa8_A Secreted protein BARF1; 99.9 5.7E-23 1.9E-27 169.8 10.2 167 130-310 3-194 (203)
110 2vr9_A Roundabout 1, ROBO; imm 99.9 1.1E-22 3.9E-27 170.0 12.1 189 8-211 5-206 (217)
111 2c1o_A IGK-C protein; FAB frag 99.9 3.3E-22 1.1E-26 171.5 15.1 207 77-308 11-245 (254)
112 2r15_A Myomesin-1; sarcomeric 99.9 4E-22 1.4E-26 165.9 15.2 180 25-211 15-209 (212)
113 3k0w_A Mucosa-associated lymph 99.9 1.4E-21 4.9E-26 163.6 18.3 172 17-211 23-201 (218)
114 1zvo_C Myeloma immunoglobulin 99.9 9.3E-21 3.2E-25 178.9 25.9 280 18-308 6-387 (512)
115 3p2t_A Leukocyte immunoglobuli 99.9 6.8E-22 2.3E-26 162.7 15.9 185 114-316 3-194 (196)
116 3p2t_A Leukocyte immunoglobuli 99.9 2.2E-21 7.6E-26 159.6 19.0 172 23-211 15-195 (196)
117 3sgj_C Human FCG3A receptor; r 99.9 8.8E-22 3E-26 163.1 16.5 168 115-319 6-175 (204)
118 1f97_A Junction adhesion molec 99.9 3.6E-22 1.2E-26 166.1 14.2 177 130-319 11-208 (212)
119 3grw_A Fibroblast growth facto 99.9 1.2E-21 4.1E-26 166.4 17.5 182 130-320 25-220 (241)
120 3rbs_A Myomesin-1; immunoglobu 99.9 8.9E-22 3E-26 163.4 16.2 177 130-316 12-205 (207)
121 2ifg_A High affinity nerve gro 99.9 2.8E-23 9.5E-28 186.6 7.5 203 81-319 136-346 (347)
122 1f2q_A High affinity immunoglo 99.9 8.4E-22 2.9E-26 159.3 15.1 160 19-211 11-170 (176)
123 3s97_C Contactin-1; carbonic a 99.9 3.8E-22 1.3E-26 164.5 13.2 190 10-211 6-200 (201)
124 1f97_A Junction adhesion molec 99.9 1.3E-21 4.4E-26 162.7 16.6 178 14-211 3-206 (212)
125 3k0w_A Mucosa-associated lymph 99.9 1.5E-21 5.1E-26 163.5 17.0 179 116-318 18-202 (218)
126 2vr9_A Roundabout 1, ROBO; imm 99.9 6.6E-22 2.2E-26 165.3 14.5 186 114-318 7-206 (217)
127 3ojm_B Fibroblast growth facto 99.9 6.5E-22 2.2E-26 166.8 14.6 183 129-320 28-223 (231)
128 1fnl_A Low affinity immunoglob 99.9 1.7E-21 5.7E-26 157.4 16.0 167 114-317 5-173 (175)
129 1qz1_A Neural cell adhesion mo 99.9 1.2E-20 4E-25 164.9 22.1 204 116-338 2-220 (291)
130 3r4d_A CEA-related cell adhesi 99.9 1.2E-21 4.1E-26 162.6 14.9 173 20-211 7-199 (208)
131 1vca_A VCAM-D1,2, human vascul 99.9 7.5E-21 2.6E-25 157.2 19.5 171 22-211 11-196 (202)
132 3grw_A Fibroblast growth facto 99.9 8.2E-22 2.8E-26 167.5 14.1 190 10-211 10-217 (241)
133 2v9r_A Roundabout homolog 1; p 99.9 1.2E-21 4E-26 163.0 14.7 186 115-320 8-204 (212)
134 1ugn_A LIR1, leukocyte immunog 99.9 2E-21 6.9E-26 160.1 15.4 186 114-317 3-197 (198)
135 2d3v_A Leukocyte immunoglobuli 99.9 7.7E-22 2.6E-26 162.4 11.9 175 114-306 3-180 (196)
136 2o26_X MAST/stem cell growth f 99.9 3.3E-21 1.1E-25 168.5 16.6 190 5-211 85-287 (290)
137 4fqp_A Poliovirus receptor; im 99.9 2.5E-21 8.6E-26 171.3 15.8 187 5-211 111-303 (313)
138 3ejj_X Macrophage colony-stimu 99.9 8.3E-21 2.8E-25 165.7 18.9 194 4-211 81-280 (289)
139 2x1w_L Vascular endothelial gr 99.9 2.6E-21 8.8E-26 161.5 14.8 180 130-320 17-209 (213)
140 2x1w_L Vascular endothelial gr 99.9 5.7E-21 2E-25 159.3 16.9 177 18-211 13-206 (213)
141 2d3v_A Leukocyte immunoglobuli 99.9 1.9E-21 6.4E-26 160.1 13.7 160 23-199 15-180 (196)
142 1ugn_A LIR1, leukocyte immunog 99.9 6.9E-21 2.4E-25 156.9 16.7 170 23-211 15-197 (198)
143 1b6u_A KIR2DL3, P58 killer cel 99.9 6.9E-21 2.4E-25 163.1 17.1 212 22-263 16-240 (257)
144 2gi7_A GPVI protein; IG-like d 99.9 2.4E-20 8.1E-25 151.9 19.4 172 9-210 6-183 (184)
145 1f2q_A High affinity immunoglo 99.9 2.9E-21 1E-25 156.1 13.9 169 115-320 3-173 (176)
146 1nbq_A JAM, junctional adhesio 99.9 1E-21 3.5E-26 162.9 11.1 176 128-316 12-207 (209)
147 3ry4_A Low affinity immunoglob 99.9 8.1E-21 2.8E-25 152.4 15.9 158 19-210 11-169 (170)
148 2wim_A N-CAM 2, NCAM2, neural 99.9 2.1E-20 7.3E-25 163.2 19.9 183 116-319 4-192 (291)
149 3ojm_B Fibroblast growth facto 99.9 2.4E-21 8.4E-26 163.2 12.2 191 9-211 13-220 (231)
150 3d9a_L Light chain of hyhel10 99.9 5.2E-20 1.8E-24 153.3 19.9 171 19-200 8-202 (213)
151 3bp6_B Programmed cell death 1 99.9 9E-21 3.1E-25 156.7 15.1 175 17-211 7-192 (202)
152 1lk3_L 9D7 light chain; antige 99.9 9.8E-20 3.4E-24 151.4 20.6 171 19-200 7-201 (210)
153 1oll_A NK receptor; immune sys 99.9 3.8E-20 1.3E-24 151.2 17.8 180 115-317 3-187 (188)
154 3s97_C Contactin-1; carbonic a 99.9 1.1E-20 3.9E-25 155.6 14.8 178 129-317 17-200 (201)
155 3ry4_A Low affinity immunoglob 99.9 1.9E-20 6.6E-25 150.2 15.6 164 116-316 4-169 (170)
156 3jz7_A MCAR, CAR, coxsackievir 99.9 4.6E-21 1.6E-25 159.5 12.3 174 130-319 10-213 (214)
157 3rjd_A High affinity immunoglo 99.8 7E-20 2.4E-24 157.4 19.7 165 117-318 2-167 (262)
158 3mj8_L Stimulatory hamster ant 99.8 4.6E-20 1.6E-24 153.6 17.9 169 21-199 9-201 (213)
159 2gi7_A GPVI protein; IG-like d 99.8 9.8E-21 3.4E-25 154.2 13.5 163 114-307 6-169 (184)
160 3jz7_A MCAR, CAR, coxsackievir 99.8 2.2E-21 7.5E-26 161.4 9.7 176 18-211 6-211 (214)
161 1uct_A Immunoglobulin alpha FC 99.8 1.1E-20 3.7E-25 158.2 13.5 183 9-211 7-197 (218)
162 1nbq_A JAM, junctional adhesio 99.8 1.7E-21 5.8E-26 161.6 8.5 181 12-211 4-208 (209)
163 3oq3_B IFN-alpha/beta binding 99.8 4.2E-20 1.4E-24 164.6 17.9 170 22-210 138-328 (329)
164 3bp6_B Programmed cell death 1 99.8 1.3E-20 4.4E-25 155.7 13.3 170 130-317 12-192 (202)
165 1uct_A Immunoglobulin alpha FC 99.8 2.1E-20 7.3E-25 156.4 14.7 184 114-319 7-199 (218)
166 2y23_A Myomesin; structural pr 99.8 3.5E-20 1.2E-24 163.4 16.7 190 11-210 106-310 (312)
167 1nkr_A P58-CL42 KIR; inhibitor 99.8 1.1E-19 3.8E-24 150.0 18.6 171 22-210 17-200 (201)
168 2fbo_J V1V2;, variable region- 99.8 1.3E-20 4.4E-25 160.9 13.1 175 18-204 8-242 (250)
169 4dkd_C Macrophage colony-stimu 99.8 2.9E-20 1E-24 162.4 15.6 193 4-211 81-280 (292)
170 1oll_A NK receptor; immune sys 99.8 4E-20 1.4E-24 151.1 15.4 170 23-211 14-187 (188)
171 2y25_A Myomesin; structural pr 99.8 1.5E-20 5.1E-25 166.3 13.6 180 25-211 111-314 (317)
172 1itb_B Type 1 interleukin-1 re 99.8 4.7E-20 1.6E-24 163.0 16.1 177 21-211 112-313 (315)
173 4frw_A Poliovirus receptor-rel 99.8 1.4E-19 4.9E-24 150.6 17.4 177 19-210 6-209 (218)
174 3b5h_A Cervical EMMPRIN, HAB18 99.8 2.2E-19 7.5E-24 145.9 17.7 166 21-211 7-182 (184)
175 3u83_A Poliovirus receptor-rel 99.8 2.8E-20 9.7E-25 165.6 13.5 188 4-211 123-319 (331)
176 4f80_A Butyrophilin subfamily 99.8 5.7E-20 2E-24 154.7 14.5 173 130-317 14-212 (226)
177 1mq8_A ICAM-1, intercellular a 99.8 1.9E-20 6.5E-25 162.3 11.1 259 19-317 6-281 (291)
178 4fom_A Poliovirus receptor-rel 99.8 1.6E-21 5.4E-26 172.1 3.9 172 22-211 124-299 (308)
179 2fbo_J V1V2;, variable region- 99.8 8.7E-20 3E-24 155.7 14.5 173 130-315 12-249 (250)
180 1hng_A CD2; T lymphocyte adhes 99.8 6.1E-20 2.1E-24 148.3 12.8 150 20-202 4-167 (176)
181 3r4d_A CEA-related cell adhesi 99.8 9.5E-20 3.2E-24 151.0 14.3 174 130-319 9-201 (208)
182 4frw_A Poliovirus receptor-rel 99.8 2.4E-20 8.1E-25 155.3 10.6 174 130-317 9-210 (218)
183 3nl4_L Antigen binding fragmen 99.8 6.8E-19 2.3E-23 146.5 19.2 165 19-195 8-198 (213)
184 1ry7_B FGFR-3, fibroblast grow 99.8 9.6E-21 3.3E-25 168.9 8.3 180 20-211 131-326 (334)
185 1vca_A VCAM-D1,2, human vascul 99.8 1.2E-19 4E-24 150.0 14.0 173 131-320 12-199 (202)
186 2ifg_A High affinity nerve gro 99.8 9.5E-21 3.3E-25 170.1 8.0 170 19-211 165-344 (347)
187 3vh8_G Killer cell immunoglobu 99.8 5.1E-19 1.7E-23 156.6 18.8 206 114-339 22-243 (316)
188 2c1o_A IGK-C protein; FAB frag 99.8 8.1E-19 2.8E-23 150.3 19.4 171 19-200 45-244 (254)
189 1q0x_L FAB 9B1, light chain; a 99.8 7.3E-19 2.5E-23 146.3 18.4 171 19-199 7-203 (212)
190 2ny1_B T-cell surface glycopro 99.8 2.8E-20 9.7E-25 151.3 9.4 160 20-211 3-178 (184)
191 2xzc_L FAB A.17 light chain; i 99.8 1.6E-18 5.5E-23 144.7 20.2 171 19-200 7-204 (216)
192 3o4o_C Interleukin-1 receptor 99.8 9.6E-20 3.3E-24 162.8 13.6 184 116-318 18-220 (339)
193 3r06_A Anti-mouse CD3epsilon a 99.8 1.8E-18 6E-23 144.0 19.7 171 19-200 8-202 (213)
194 3sbw_C Programmed cell death 1 99.8 4.5E-19 1.5E-23 148.5 16.2 175 131-319 12-212 (222)
195 1p6f_A NKP46, natural cytotoxi 99.8 4.7E-19 1.6E-23 150.5 16.3 170 23-211 17-190 (242)
196 1nkr_A P58-CL42 KIR; inhibitor 99.8 7.7E-19 2.6E-23 145.0 17.0 171 114-305 6-184 (201)
197 3sob_L Antibody light chain; b 99.8 1.5E-18 5.2E-23 146.8 19.3 171 19-200 31-225 (237)
198 3tv3_L PGT128 light chain, IG 99.8 5.8E-19 2E-23 146.8 16.2 167 21-199 9-199 (211)
199 1p6f_A NKP46, natural cytotoxi 99.8 1.3E-18 4.6E-23 147.7 18.5 182 114-318 5-191 (242)
200 2ny1_B T-cell surface glycopro 99.8 1.2E-19 4.1E-24 147.5 11.6 157 131-320 6-181 (184)
201 2pet_A Lutheran blood group gl 99.8 1.8E-19 6.2E-24 151.8 12.9 164 18-197 6-211 (231)
202 1sy6_A T-cell surface glycopro 99.8 7.5E-20 2.6E-24 151.4 10.2 165 24-211 15-203 (204)
203 3pv7_A B7-H6, IG-like domain-c 99.8 7.5E-19 2.5E-23 149.9 16.4 178 18-210 9-224 (248)
204 3bkj_L WO2 IGG2A FAB fragment 99.8 2.1E-18 7.1E-23 147.6 19.0 171 19-200 41-240 (252)
205 3s96_B 3B5H10 FAB light chain; 99.8 8.6E-19 2.9E-23 146.4 15.5 169 21-199 9-208 (218)
206 4f80_A Butyrophilin subfamily 99.8 1.1E-18 3.9E-23 146.7 16.3 174 20-211 12-212 (226)
207 1nfd_E H57 FAB; complex (immun 99.8 2.1E-19 7.3E-24 149.5 11.6 172 19-200 6-201 (212)
208 1hng_A CD2; T lymphocyte adhes 99.8 6.5E-20 2.2E-24 148.1 6.9 156 131-315 7-173 (176)
209 3d9a_L Light chain of hyhel10 99.8 5.4E-19 1.9E-23 147.1 12.5 170 130-308 11-203 (213)
210 4i0k_A CD276 antigen; immunogl 99.8 4.6E-19 1.6E-23 148.5 12.1 178 130-319 5-207 (222)
211 1jbj_A CD3 epsilon and gamma e 99.8 1.8E-19 6E-24 147.0 9.2 156 24-201 11-179 (186)
212 3sbw_C Programmed cell death 1 99.8 1.8E-18 6E-23 144.9 15.4 177 19-211 8-210 (222)
213 2wng_A Tyrosine-protein phosph 99.8 4.8E-19 1.6E-23 157.6 12.4 173 22-208 127-316 (327)
214 1nqb_A Single-chain antibody f 99.8 6E-18 2.1E-22 145.1 18.9 178 19-211 7-232 (256)
215 1jbj_A CD3 epsilon and gamma e 99.8 1.2E-19 4.2E-24 147.9 7.9 154 132-308 11-179 (186)
216 2ghw_B Anti-SARS SCFV antibody 99.8 5.8E-18 2E-22 144.3 18.1 186 20-211 10-241 (247)
217 4dep_C Interleukin-1 receptor 99.8 3.4E-19 1.2E-23 159.9 10.8 180 19-211 127-332 (349)
218 1lk3_L 9D7 light chain; antige 99.8 1.7E-18 5.7E-23 143.9 14.2 170 130-308 10-202 (210)
219 2if7_A SLAM family member 6; N 99.8 7.5E-18 2.6E-22 138.1 17.2 158 18-201 4-182 (193)
220 3bqu_C 3H6 FAB light chain; be 99.8 3.5E-19 1.2E-23 150.5 9.0 171 19-200 30-224 (233)
221 2oz4_A Intercellular adhesion 99.8 2E-17 7E-22 142.5 20.0 157 131-319 14-183 (265)
222 4i0k_A CD276 antigen; immunogl 99.8 1.1E-18 3.8E-23 146.2 11.6 175 21-211 4-205 (222)
223 2v5y_A Receptor-type tyrosine- 99.8 3.1E-17 1.1E-21 161.5 23.8 242 26-309 90-345 (731)
224 1sy6_A T-cell surface glycopro 99.8 1.8E-18 6.1E-23 143.1 12.6 164 132-315 15-201 (204)
225 1dr9_A B7-1 (CD80), T lymphocy 99.8 1.3E-18 4.6E-23 143.4 11.3 168 130-314 4-197 (201)
226 3juy_B 3B3 single chain varian 99.8 9.4E-18 3.2E-22 143.9 17.0 193 12-210 6-255 (256)
227 3mj8_L Stimulatory hamster ant 99.8 1.9E-18 6.5E-23 143.8 12.2 174 131-312 11-207 (213)
228 1b6u_A KIR2DL3, P58 killer cel 99.8 7.2E-18 2.5E-22 144.3 16.0 186 114-319 5-202 (257)
229 3auv_A SC-DSFV derived from th 99.8 2.2E-17 7.5E-22 143.2 19.3 189 19-211 19-253 (276)
230 3mj6_A Junctional adhesion mol 99.8 3.5E-18 1.2E-22 147.4 14.1 172 18-211 11-236 (268)
231 4fmk_A Poliovirus receptor-rel 99.8 3.2E-18 1.1E-22 143.0 13.4 172 131-315 12-214 (225)
232 1nqb_A Single-chain antibody f 99.8 3.5E-17 1.2E-21 140.3 20.1 177 130-319 10-234 (256)
233 1dr9_A B7-1 (CD80), T lymphocy 99.8 2.3E-18 7.8E-23 142.0 12.0 164 21-202 3-192 (201)
234 1c1e_H Catalytic antibody 1E9 99.8 5.4E-18 1.9E-22 141.7 14.2 170 19-200 7-209 (219)
235 3umt_A SCFV heavy chain and li 99.8 1.1E-17 3.7E-22 143.5 16.4 185 21-211 11-244 (256)
236 4dzb_B Vbeta2 (MAIT T cell rec 99.8 1.1E-17 3.8E-22 142.5 16.2 175 19-201 8-221 (246)
237 2p1y_A Bispecific alpha/beta T 99.8 4.7E-17 1.6E-21 137.8 19.8 162 130-305 10-222 (238)
238 1q0x_L FAB 9B1, light chain; a 99.8 3E-18 1E-22 142.5 12.1 174 130-311 10-208 (212)
239 3uzq_A Anti-dengue MAB 4E11; d 99.8 2.4E-17 8.2E-22 141.1 18.0 188 19-211 8-243 (253)
240 4fmk_A Poliovirus receptor-rel 99.8 2.3E-17 8E-22 137.8 17.5 177 21-211 10-218 (225)
241 2ghw_B Anti-SARS SCFV antibody 99.8 5.7E-17 1.9E-21 138.1 20.0 185 130-317 12-241 (247)
242 2j6e_L IGM, FAB light chain; a 99.8 2.3E-18 7.7E-23 145.5 10.9 173 19-200 26-224 (234)
243 1f3r_B FV antibody fragment; I 99.8 1.9E-17 6.6E-22 142.0 16.8 163 130-305 10-232 (257)
244 3r06_A Anti-mouse CD3epsilon a 99.8 1.4E-17 4.9E-22 138.4 15.5 170 130-308 11-203 (213)
245 1hnf_A CD2; T lymphocyte adhes 99.8 6.2E-18 2.1E-22 136.9 12.8 151 19-202 6-172 (182)
246 3nl4_L Antigen binding fragmen 99.8 1.6E-17 5.4E-22 138.2 15.7 163 130-302 11-198 (213)
247 1gsm_A Madcam-1, mucosal addre 99.8 1.2E-16 4E-21 131.1 20.2 164 12-198 7-192 (210)
248 3mjg_X Beta-type platelet-deri 99.8 1.9E-17 6.4E-22 144.5 16.5 165 22-211 105-277 (289)
249 2if7_A SLAM family member 6; N 99.8 4.3E-18 1.5E-22 139.6 11.6 155 130-311 8-185 (193)
250 3uzq_A Anti-dengue MAB 4E11; d 99.8 4.6E-17 1.6E-21 139.3 18.5 187 130-319 11-245 (253)
251 1moe_A Anti-CEA MAB T84.66; an 99.8 1.6E-16 5.4E-21 134.7 21.7 170 19-196 8-219 (240)
252 3esu_F Antibody 14B7* light ch 99.8 5E-17 1.7E-21 138.7 18.4 174 17-196 9-231 (250)
253 3sob_L Antibody light chain; b 99.8 1.7E-17 5.9E-22 140.2 15.4 170 130-309 34-227 (237)
254 3umt_A SCFV heavy chain and li 99.8 6.4E-17 2.2E-21 138.6 19.1 186 131-319 13-246 (256)
255 3nfj_J T cell receptor beta ch 99.8 6.3E-17 2.1E-21 137.7 18.8 176 19-201 8-220 (245)
256 3mj6_A Junctional adhesion mol 99.8 8.4E-18 2.9E-22 145.0 13.5 173 130-320 15-239 (268)
257 2znx_A SCFV; fluorotryptohpan, 99.8 1E-16 3.5E-21 136.2 20.0 173 19-197 8-222 (242)
258 3auv_A SC-DSFV derived from th 99.8 1.4E-16 4.8E-21 138.1 21.0 188 130-319 22-255 (276)
259 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 1.4E-17 4.9E-22 139.5 14.1 172 19-201 7-213 (222)
260 3pv7_A B7-H6, IG-like domain-c 99.7 1.4E-17 4.6E-22 142.1 14.1 172 131-316 14-224 (248)
261 2vol_A Murine IGG FC; FC, zinc 99.7 5.8E-18 2E-22 140.4 11.5 166 24-199 15-196 (207)
262 2pet_A Lutheran blood group gl 99.7 2E-18 6.8E-23 145.4 8.6 175 130-316 10-229 (231)
263 2p1y_A Bispecific alpha/beta T 99.7 2.7E-17 9.3E-22 139.3 15.6 173 19-198 7-222 (238)
264 2rgs_A I, IG gamma-2B heavy ch 99.7 4.4E-18 1.5E-22 142.3 10.3 166 24-200 23-205 (218)
265 3eow_R Poliovirus receptor; im 99.7 2.3E-18 7.8E-23 144.2 8.6 176 130-319 9-213 (221)
266 3eow_R Poliovirus receptor; im 99.7 3.3E-18 1.1E-22 143.3 9.4 173 20-211 7-209 (221)
267 3d9a_H Heavy chain of hyhel10 99.7 1.5E-17 5.1E-22 138.1 13.2 171 19-201 7-204 (210)
268 3gkz_A Anti-methamphetamine si 99.7 2.8E-16 9.5E-21 134.7 21.6 175 130-306 18-236 (257)
269 2zg1_A Sialic acid-binding IG- 99.7 8.7E-18 3E-22 139.8 11.6 163 19-200 7-202 (214)
270 1c1e_H Catalytic antibody 1E9 99.7 1.5E-17 5.2E-22 139.0 13.0 174 130-313 10-215 (219)
271 1qok_A MFE-23 recombinant anti 99.7 7.7E-17 2.6E-21 140.2 17.9 187 18-211 32-267 (282)
272 1f3r_B FV antibody fragment; I 99.7 2.4E-17 8.3E-22 141.4 14.5 172 20-198 8-232 (257)
273 2vol_A Murine IGG FC; FC, zinc 99.7 1.6E-17 5.5E-22 137.7 12.8 165 132-307 15-197 (207)
274 1mju_H Immunoglobulin MS6-12; 99.7 2.9E-17 9.9E-22 138.2 14.4 172 18-200 6-206 (227)
275 3ux9_B SCFV antibody; five hel 99.7 1.8E-16 6E-21 135.8 19.2 173 19-198 9-236 (256)
276 3s96_B 3B5H10 FAB light chain; 99.7 1.6E-17 5.6E-22 138.6 12.3 173 131-311 11-213 (218)
277 2zg1_A Sialic acid-binding IG- 99.7 3.2E-17 1.1E-21 136.4 13.9 167 130-315 10-210 (214)
278 1moe_A Anti-CEA MAB T84.66; an 99.7 1.4E-16 4.6E-21 135.1 18.0 163 130-304 11-220 (240)
279 2fbj_H IGA-kappa J539 FAB (hea 99.7 1.7E-16 5.9E-21 132.8 18.3 173 19-202 7-212 (220)
280 1nfd_E H57 FAB; complex (immun 99.7 8.6E-19 2.9E-23 145.8 4.0 173 130-311 9-205 (212)
281 1pz5_B Heavy chain of FAB (SYA 99.7 4.4E-17 1.5E-21 136.3 14.5 171 19-200 7-210 (220)
282 3nl4_H Antigen binding fragmen 99.7 3E-17 1E-21 136.9 13.4 171 19-200 6-203 (215)
283 3tv3_L PGT128 light chain, IG 99.7 8.9E-18 3E-22 139.5 10.0 171 131-312 11-205 (211)
284 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.3E-16 4.5E-21 136.7 17.4 175 18-199 9-234 (256)
285 3pl6_D MBP peptide / T-cell re 99.7 1E-16 3.5E-21 138.4 16.8 176 18-201 32-242 (268)
286 1svz_A Immunoglobulin;, single 99.7 2.4E-16 8.3E-21 134.2 18.8 174 19-197 8-228 (247)
287 3bqu_C 3H6 FAB light chain; be 99.7 8.1E-18 2.8E-22 142.0 9.3 170 130-308 33-225 (233)
288 2znx_A SCFV; fluorotryptohpan, 99.7 4.4E-16 1.5E-20 132.3 20.2 162 130-304 11-222 (242)
289 3gkz_A Anti-methamphetamine si 99.7 9.6E-17 3.3E-21 137.6 16.1 189 18-211 14-248 (257)
290 3q5y_A TCR N15 beta; IG, T cel 99.7 1.6E-16 5.5E-21 134.7 17.2 174 19-200 9-213 (240)
291 2gjj_A A21 single-chain antibo 99.7 3.6E-16 1.2E-20 134.6 19.5 175 18-197 11-239 (264)
292 1dee_B IGM RF 2A2; FAB-IBP com 99.7 2.6E-16 8.9E-21 132.0 18.2 173 20-202 8-218 (223)
293 4ei6_B Vbeta16 XV19 type II na 99.7 9.2E-17 3.1E-21 136.6 15.5 174 19-200 9-219 (245)
294 3bkj_L WO2 IGG2A FAB fragment 99.7 5.3E-17 1.8E-21 138.8 13.8 178 130-318 44-249 (252)
295 3juy_B 3B3 single chain varian 99.7 3.9E-16 1.3E-20 133.7 19.2 176 128-306 14-244 (256)
296 2wqr_A IG epsilon chain C regi 99.7 3E-17 1E-21 145.7 12.1 170 22-200 123-309 (323)
297 1op3_H FAB 2G12, heavy chain; 99.7 1.2E-16 4E-21 134.3 15.0 170 19-199 7-213 (225)
298 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 1.3E-16 4.4E-21 133.7 15.1 173 130-313 10-218 (222)
299 3d9a_H Heavy chain of hyhel10 99.7 1E-16 3.6E-21 133.0 14.3 168 130-310 10-206 (210)
300 3esu_F Antibody 14B7* light ch 99.7 3.6E-16 1.2E-20 133.4 18.0 171 130-303 14-231 (250)
301 2w59_A IGY FCU3-4; immunoglobu 99.7 3.8E-17 1.3E-21 137.9 11.8 172 19-200 20-217 (231)
302 3m8o_H Immunoglobulin A1 heavy 99.7 3.6E-16 1.2E-20 130.9 17.7 171 20-201 8-213 (221)
303 2dru_A Chimera of CD48 antigen 99.7 3.7E-17 1.3E-21 132.3 11.2 152 19-201 6-171 (180)
304 1ccz_A Protein (CD58); LFA-3, 99.7 4.2E-17 1.5E-21 130.8 11.4 149 20-201 3-161 (171)
305 2wbj_D OB TCR; transmembrane, 99.7 4.2E-16 1.4E-20 135.3 18.6 177 18-201 30-246 (279)
306 1qok_A MFE-23 recombinant anti 99.7 7.7E-16 2.6E-20 133.9 19.9 184 130-317 36-267 (282)
307 2j6e_L IGM, FAB light chain; a 99.7 1E-17 3.5E-22 141.5 7.7 176 130-312 29-229 (234)
308 2xzc_L FAB A.17 light chain; i 99.7 6.6E-17 2.3E-21 134.8 12.5 170 130-308 10-205 (216)
309 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 4.3E-16 1.5E-20 134.4 17.9 175 19-197 22-254 (268)
310 1svz_A Immunoglobulin;, single 99.7 7.5E-16 2.6E-20 131.2 18.6 172 130-304 11-228 (247)
311 2rgs_A I, IG gamma-2B heavy ch 99.7 5.8E-17 2E-21 135.5 11.4 180 114-308 7-206 (218)
312 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 3.1E-16 1E-20 134.4 16.2 174 130-307 13-235 (256)
313 1mju_H Immunoglobulin MS6-12; 99.7 5.9E-17 2E-21 136.3 11.5 179 131-319 11-218 (227)
314 3qib_D 2B4 beta chain; IG doma 99.7 2.6E-16 9E-21 135.9 15.8 174 19-201 34-245 (270)
315 3qib_D 2B4 beta chain; IG doma 99.7 1.7E-17 5.8E-22 143.4 8.0 206 78-308 4-245 (270)
316 1pz5_B Heavy chain of FAB (SYA 99.7 1.1E-16 3.7E-21 133.9 12.7 173 130-313 10-216 (220)
317 1hnf_A CD2; T lymphocyte adhes 99.7 3.7E-17 1.3E-21 132.3 9.4 155 130-314 9-177 (182)
318 4dzb_B Vbeta2 (MAIT T cell rec 99.7 1.4E-16 4.9E-21 135.5 13.5 174 130-309 11-222 (246)
319 3shs_A HOC head outer capsid p 99.7 8.4E-15 2.9E-19 121.4 23.1 240 22-306 12-282 (304)
320 1i1c_A IGG2A, IG gamma-2A chai 99.7 3.9E-17 1.3E-21 138.4 9.6 166 24-199 29-210 (239)
321 3mtr_A N-CAM-1, NCAM-1, neural 99.7 1.4E-16 4.8E-21 132.7 12.5 174 130-319 28-210 (215)
322 3bae_H WO2 IGG2A FAB fragment 99.7 9.8E-17 3.3E-21 135.0 11.6 172 19-201 7-216 (228)
323 2gjj_A A21 single-chain antibo 99.7 7.9E-16 2.7E-20 132.5 17.5 162 130-304 15-239 (264)
324 2fbj_H IGA-kappa J539 FAB (hea 99.7 6.2E-16 2.1E-20 129.4 16.4 170 130-309 10-212 (220)
325 1dn0_B IGM-kappa cold agglutin 99.7 1.1E-15 3.8E-20 128.9 18.0 173 19-201 7-217 (232)
326 2gki_A Nuclease; anti-DNA anti 99.7 3.3E-16 1.1E-20 136.8 15.0 188 19-211 29-271 (291)
327 1op3_H FAB 2G12, heavy chain; 99.7 4.6E-16 1.6E-20 130.6 15.0 170 130-308 10-215 (225)
328 1bec_A 14.3.D T cell antigen r 99.7 1.1E-15 3.9E-20 129.3 17.5 173 19-199 6-211 (238)
329 3ux9_B SCFV antibody; five hel 99.7 5.5E-16 1.9E-20 132.8 15.3 171 131-305 13-236 (256)
330 3mtr_A N-CAM-1, NCAM-1, neural 99.7 2.4E-16 8.4E-21 131.3 12.7 172 8-202 16-200 (215)
331 2gki_A Nuclease; anti-DNA anti 99.7 1.1E-15 3.6E-20 133.6 16.7 173 130-305 32-258 (291)
332 3omz_A Human vdelta1 gamma del 99.7 1.1E-15 3.7E-20 131.2 16.3 174 19-197 9-231 (259)
333 1l6x_A Immunoglobulin gamma-1 99.7 4E-16 1.4E-20 129.2 12.5 164 25-199 16-196 (207)
334 3to4_D NKT vbeta2 (mouse varia 99.7 8E-16 2.7E-20 131.6 14.8 172 19-199 8-218 (253)
335 3fku_X Neutralizing antibody F 99.7 2.1E-15 7.2E-20 131.0 17.5 184 130-317 10-249 (280)
336 2xqy_G A13-D6.3 monoclonal ant 99.7 1.2E-15 4E-20 131.1 15.5 170 19-199 13-213 (261)
337 3fku_X Neutralizing antibody F 99.7 7.8E-16 2.7E-20 133.7 13.9 174 19-198 7-234 (280)
338 1c5d_H Monoclonal antibody aga 99.7 2.5E-15 8.5E-20 125.2 16.3 169 19-200 7-205 (215)
339 1hxm_B Gamma-delta T-cell rece 99.7 2.4E-15 8E-20 127.8 16.4 176 18-201 7-219 (242)
340 1oga_E TRBC1, T-cell receptor 99.7 3.3E-15 1.1E-19 127.7 16.9 176 18-201 9-219 (252)
341 1ccz_A Protein (CD58); LFA-3, 99.7 2.1E-16 7E-21 126.8 8.8 150 131-314 6-167 (171)
342 3nfj_J T cell receptor beta ch 99.7 1.4E-15 4.9E-20 129.3 14.5 175 130-309 11-221 (245)
343 1gsm_A Madcam-1, mucosal addre 99.7 1.5E-15 5.2E-20 124.5 14.0 161 130-308 17-195 (210)
344 1dee_B IGM RF 2A2; FAB-IBP com 99.7 8.2E-15 2.8E-19 122.8 18.9 174 130-312 10-221 (223)
345 1l6x_A Immunoglobulin gamma-1 99.7 6.9E-16 2.4E-20 127.8 11.9 167 133-307 16-197 (207)
346 1hxm_B Gamma-delta T-cell rece 99.7 6.4E-15 2.2E-19 125.1 17.9 180 130-316 11-227 (242)
347 4acp_A IG gamma-1 chain C regi 99.7 3.1E-16 1.1E-20 132.7 9.5 200 83-306 1-217 (240)
348 3omz_A Human vdelta1 gamma del 99.7 1.3E-15 4.6E-20 130.6 13.6 172 130-304 12-231 (259)
349 3liz_H 4C3 monoclonal antibody 99.7 2.6E-15 8.9E-20 128.4 15.3 171 19-200 7-209 (253)
350 1za6_B IGG heavy chain; immuno 99.6 1.1E-15 3.7E-20 136.9 13.1 168 130-308 10-207 (344)
351 1i1c_A IGG2A, IG gamma-2A chai 99.6 1.6E-15 5.6E-20 128.4 13.5 181 116-307 15-211 (239)
352 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 3.2E-15 1.1E-19 129.0 15.5 173 130-304 25-254 (268)
353 1ypz_F T-cell receptor gamma c 99.6 4.5E-15 1.5E-19 125.0 15.4 177 18-200 7-216 (230)
354 3bae_H WO2 IGG2A FAB fragment 99.6 2.8E-15 9.6E-20 126.1 14.0 172 130-311 10-219 (228)
355 3nl4_H Antigen binding fragmen 99.6 1.7E-15 5.8E-20 126.1 12.6 176 130-314 9-210 (215)
356 2w59_A IGY FCU3-4; immunoglobu 99.6 9.8E-16 3.4E-20 129.2 11.2 183 115-308 11-218 (231)
357 2dru_A Chimera of CD48 antigen 99.6 5.1E-16 1.7E-20 125.6 8.9 152 130-313 9-176 (180)
358 3q5y_A TCR N15 beta; IG, T cel 99.6 3.9E-15 1.3E-19 126.1 14.8 173 130-308 12-214 (240)
359 1dn0_B IGM-kappa cold agglutin 99.6 1E-14 3.5E-19 122.9 17.1 178 130-316 10-225 (232)
360 3o3u_N Maltose-binding peripla 99.6 4.1E-16 1.4E-20 149.5 9.3 167 130-308 376-567 (581)
361 3m8o_H Immunoglobulin A1 heavy 99.6 1.2E-14 4.2E-19 121.4 17.2 172 130-309 10-214 (221)
362 3bn9_D E2 FAB heavy chain; ant 99.6 8.7E-16 3E-20 131.4 10.1 170 19-199 7-218 (257)
363 3o3u_N Maltose-binding peripla 99.6 5.8E-15 2E-19 141.5 16.6 164 19-200 373-566 (581)
364 4ei6_B Vbeta16 XV19 type II na 99.6 5.6E-15 1.9E-19 125.5 14.4 172 130-308 12-220 (245)
365 3pl6_D MBP peptide / T-cell re 99.6 2.2E-15 7.5E-20 129.9 11.7 173 130-308 36-242 (268)
366 1ow0_A IG alpha-1 chain C regi 99.6 2.1E-16 7.2E-21 131.6 4.7 169 19-200 11-200 (214)
367 2aty_A Complement receptor chi 99.6 1.2E-14 4E-19 131.7 16.5 166 24-199 180-361 (376)
368 3knb_B Obscurin-like protein 1 99.6 4.7E-15 1.6E-19 108.8 10.8 94 223-319 13-106 (107)
369 1c5d_H Monoclonal antibody aga 99.6 2.2E-14 7.5E-19 119.4 15.9 172 130-310 10-208 (215)
370 2xqy_G A13-D6.3 monoclonal ant 99.6 1.4E-14 4.9E-19 124.2 14.7 169 130-308 16-215 (261)
371 3bn9_D E2 FAB heavy chain; ant 99.6 9E-15 3.1E-19 125.1 13.0 169 130-307 10-219 (257)
372 3tv3_H PGT128 heavy chain, IG 99.6 8.2E-15 2.8E-19 124.2 12.6 171 19-200 7-226 (239)
373 3knb_A Titin; IG-like, titin, 99.6 1.1E-14 3.8E-19 105.5 11.4 95 222-318 4-99 (100)
374 3knb_B Obscurin-like protein 1 99.6 2.4E-15 8E-20 110.4 7.9 91 11-104 13-103 (107)
375 4acp_A IG gamma-1 chain C regi 99.6 4.2E-15 1.4E-19 125.7 9.9 166 24-199 36-217 (240)
376 3qhz_H Human monoclonal antibo 99.6 1.6E-14 5.4E-19 121.8 12.7 171 20-200 8-218 (232)
377 3liz_H 4C3 monoclonal antibody 99.6 3.3E-14 1.1E-18 121.5 14.2 178 130-317 10-219 (253)
378 2wbj_D OB TCR; transmembrane, 99.6 1.4E-14 4.7E-19 125.7 11.9 174 130-309 34-247 (279)
379 2v5y_A Receptor-type tyrosine- 99.6 4.9E-14 1.7E-18 138.8 16.9 195 134-347 90-346 (731)
380 2aty_A Complement receptor chi 99.6 7.2E-14 2.5E-18 126.5 15.5 165 132-307 180-362 (376)
381 1ypz_F T-cell receptor gamma c 99.5 8.5E-14 2.9E-18 117.1 13.9 181 130-314 11-223 (230)
382 3to4_D NKT vbeta2 (mouse varia 99.5 6.3E-14 2.2E-18 119.7 13.1 173 130-307 11-219 (253)
383 1bec_A 14.3.D T cell antigen r 99.5 1.2E-13 4.2E-18 116.7 14.7 172 130-307 9-212 (238)
384 3u2s_H PG9 heavy chain; greek 99.5 4.5E-14 1.5E-18 120.2 11.9 171 19-200 6-227 (248)
385 1ypz_E T cell receptor delta, 99.5 1.1E-13 3.7E-18 114.5 13.8 163 19-199 8-197 (207)
386 1ow0_A IG alpha-1 chain C regi 99.5 2.6E-15 9E-20 125.0 3.4 179 116-307 3-200 (214)
387 3qhz_H Human monoclonal antibo 99.5 3.2E-14 1.1E-18 119.9 10.0 178 130-316 10-227 (232)
388 3knb_A Titin; IG-like, titin, 99.5 4.6E-14 1.6E-18 102.2 9.4 86 17-104 10-97 (100)
389 1iam_A ICAM-1, CD54, intercell 99.5 3.1E-13 1E-17 108.4 15.0 157 19-199 6-166 (185)
390 3n9g_H FAB fragment of MAB CR4 99.5 1.5E-13 5.1E-18 115.6 13.9 168 20-200 8-214 (230)
391 1mq8_A ICAM-1, intercellular a 99.5 5.2E-15 1.8E-19 128.2 4.5 187 4-211 78-281 (291)
392 2cqv_A MLCK, myosin light chai 99.5 2.1E-13 7.2E-18 101.3 12.5 89 15-105 10-98 (114)
393 3tv3_H PGT128 heavy chain, IG 99.5 9.1E-14 3.1E-18 117.7 11.3 178 130-315 10-234 (239)
394 3n9g_H FAB fragment of MAB CR4 99.5 2.9E-13 9.9E-18 113.8 13.5 178 130-317 10-224 (230)
395 1g1c_A Immunoglobulin-like dom 99.5 2.9E-13 9.8E-18 97.7 11.6 94 223-318 5-98 (99)
396 1u2h_A APEG-1, aortic preferen 99.5 2.2E-13 7.4E-18 98.4 10.9 94 223-318 5-98 (99)
397 2kdg_A Myotilin; immonoglobuli 99.5 2.4E-13 8E-18 98.4 10.5 96 222-319 4-99 (100)
398 1wit_A Twitchin 18TH IGSF modu 99.5 3E-13 1E-17 96.5 10.5 90 223-317 2-93 (93)
399 2cqv_A MLCK, myosin light chai 99.5 8.5E-13 2.9E-17 98.0 13.4 95 222-319 6-100 (114)
400 3iu4_H CHP3 FAB heavy chain; a 99.5 1.3E-13 4.3E-18 118.5 10.1 168 20-200 8-213 (263)
401 3qp3_A Titin; I-SET IG-like, s 99.5 4.8E-13 1.6E-17 97.3 11.5 95 222-319 7-101 (103)
402 3u2s_H PG9 heavy chain; greek 99.5 2.6E-13 9E-18 115.4 11.6 177 130-314 9-234 (248)
403 3sob_H Antibody heavy chain, l 99.5 8.2E-13 2.8E-17 113.0 14.3 168 20-200 31-240 (256)
404 3shs_A HOC head outer capsid p 99.5 4.6E-12 1.6E-16 105.1 17.9 149 130-308 12-171 (304)
405 3mlr_H Human monoclonal anti-H 99.5 6E-13 2.1E-17 111.6 13.0 168 20-200 8-215 (226)
406 1oga_E TRBC1, T-cell receptor 99.5 3.7E-13 1.3E-17 114.9 11.9 174 130-309 13-220 (252)
407 3bn3_B ICAM-5, intercellular a 99.5 7.8E-13 2.7E-17 106.9 12.7 163 15-199 5-174 (196)
408 2edj_A Roundabout homolog 2; K 99.4 7.9E-13 2.7E-17 95.6 10.8 93 222-319 7-99 (100)
409 3qp3_A Titin; I-SET IG-like, s 99.4 3E-13 1E-17 98.4 8.5 94 8-104 5-98 (103)
410 2dm2_A Palladin; beta-sandwich 99.4 1.2E-12 3.9E-17 96.6 11.4 96 222-319 7-103 (110)
411 2e7c_A Myosin-binding protein 99.4 5.7E-13 2E-17 99.6 9.8 94 8-104 18-113 (118)
412 2yuz_A Myosin-binding protein 99.4 5.1E-13 1.8E-17 96.6 9.2 82 17-104 12-93 (100)
413 2dm3_A KIAA0992 protein, palla 99.4 4.7E-13 1.6E-17 98.7 9.0 97 222-320 8-104 (110)
414 1hxm_A Gamma-delta T-cell rece 99.4 4.1E-12 1.4E-16 106.6 15.8 164 19-199 8-198 (229)
415 2lu7_A Obscurin-like protein 1 99.4 5.9E-13 2E-17 92.7 8.9 78 20-104 4-81 (84)
416 3irg_B Obscurin-like protein 1 99.4 1.1E-12 3.7E-17 96.1 10.8 95 222-319 12-106 (107)
417 1wit_A Twitchin 18TH IGSF modu 99.4 6.3E-13 2.2E-17 94.8 9.3 89 11-104 2-92 (93)
418 3puc_A Titin; I-SET IG-like do 99.4 1.5E-12 5.1E-17 93.9 11.3 93 223-318 6-98 (99)
419 2edj_A Roundabout homolog 2; K 99.4 1.2E-12 4.2E-17 94.6 10.9 92 114-211 6-97 (100)
420 2e7c_A Myosin-binding protein 99.4 1.8E-12 6.1E-17 96.8 11.7 86 232-320 32-117 (118)
421 2kkq_A Myotilin; unknown funct 99.4 1.4E-12 4.9E-17 97.1 11.0 97 222-320 14-111 (116)
422 3iu4_H CHP3 FAB heavy chain; a 99.4 1.3E-12 4.5E-17 112.1 12.2 177 130-316 10-222 (263)
423 3irg_B Obscurin-like protein 1 99.4 4.6E-13 1.6E-17 98.1 8.0 91 11-104 13-103 (107)
424 3f8u_B Tapasin; endoplasmic re 99.4 1.9E-12 6.6E-17 115.5 13.3 179 18-208 164-398 (401)
425 1nct_A Titin; cell adhesion, g 99.4 4E-13 1.4E-17 98.3 7.4 86 17-104 19-104 (106)
426 2bk8_A Connectin, M1, titin he 99.4 1.4E-12 4.9E-17 93.7 10.2 86 17-104 6-92 (97)
427 3irg_A Titin; IG-like, titin, 99.4 2.1E-12 7.1E-17 93.2 11.0 93 223-317 5-98 (100)
428 1gxe_A Myosin binding protein 99.4 7.5E-13 2.6E-17 101.6 9.0 85 232-317 26-138 (139)
429 3kvq_A Vascular endothelial gr 99.4 7.3E-13 2.5E-17 97.2 8.5 94 222-320 9-102 (108)
430 2kdg_A Myotilin; immonoglobuli 99.4 8.5E-13 2.9E-17 95.4 8.6 92 10-104 4-96 (100)
431 3mlr_H Human monoclonal anti-H 99.4 2.7E-12 9.1E-17 107.6 12.8 171 130-310 10-218 (226)
432 1u2h_A APEG-1, aortic preferen 99.4 9.7E-13 3.3E-17 94.9 8.6 84 19-104 12-96 (99)
433 2lvc_A Obscurin-like protein 1 99.4 1.4E-12 4.8E-17 92.3 9.1 79 19-104 13-91 (91)
434 1nct_A Titin; cell adhesion, g 99.4 1.2E-12 3.9E-17 95.9 9.0 93 222-317 13-105 (106)
435 1gxe_A Myosin binding protein 99.4 8.6E-13 2.9E-17 101.2 8.2 85 18-104 24-137 (139)
436 3sob_H Antibody heavy chain, l 99.4 3.3E-12 1.1E-16 109.2 12.8 177 130-316 33-249 (256)
437 1ypz_E T cell receptor delta, 99.4 2.9E-12 9.9E-17 105.8 11.9 161 130-309 11-200 (207)
438 1g1c_A Immunoglobulin-like dom 99.4 1.3E-12 4.3E-17 94.3 8.4 91 11-104 5-96 (99)
439 2eo9_A Roundabout homolog 1; b 99.4 1.2E-12 4.3E-17 97.7 8.5 88 11-104 8-96 (118)
440 3puc_A Titin; I-SET IG-like do 99.4 1.6E-12 5.6E-17 93.7 8.7 84 19-104 13-96 (99)
441 2yr3_A Myosin light chain kina 99.4 2.1E-12 7.2E-17 93.1 9.2 89 222-316 10-98 (99)
442 2yuz_A Myosin-binding protein 99.4 3.6E-12 1.2E-16 92.1 10.1 91 223-320 7-97 (100)
443 2bk8_A Connectin, M1, titin he 99.4 7.7E-12 2.6E-16 89.8 11.7 83 235-319 12-95 (97)
444 3kvq_A Vascular endothelial gr 99.4 1.8E-12 6.3E-17 95.0 8.5 96 4-104 3-98 (108)
445 1fhg_A Telokin; immunoglobulin 99.4 2.4E-12 8.3E-17 101.0 9.7 96 222-320 40-136 (154)
446 2kkq_A Myotilin; unknown funct 99.4 3.2E-12 1.1E-16 95.1 9.7 86 17-104 20-107 (116)
447 2eo9_A Roundabout homolog 1; b 99.4 3.2E-12 1.1E-16 95.4 9.6 94 222-320 7-100 (118)
448 2yuv_A Myosin-binding protein 99.4 6.2E-12 2.1E-16 90.9 10.6 88 10-104 6-93 (100)
449 2dm2_A Palladin; beta-sandwich 99.4 4.3E-12 1.5E-16 93.4 9.9 91 11-104 8-100 (110)
450 3irg_A Titin; IG-like, titin, 99.3 3.5E-12 1.2E-16 92.0 8.8 86 17-104 10-97 (100)
451 2lvc_A Obscurin-like protein 1 99.3 7.2E-12 2.5E-16 88.6 10.2 87 222-315 3-90 (91)
452 1wwb_X Protein (brain derived 99.3 3.2E-12 1.1E-16 92.9 8.5 91 8-104 1-96 (103)
453 1iam_A ICAM-1, CD54, intercell 99.3 1.4E-11 4.8E-16 98.7 13.0 157 130-308 9-168 (185)
454 3u1s_H FAB PGT145 heavy chain; 99.3 6.4E-12 2.2E-16 108.1 11.8 167 20-199 31-253 (267)
455 2dm3_A KIAA0992 protein, palla 99.3 1.9E-12 6.4E-17 95.4 7.2 93 9-104 7-100 (110)
456 2dav_A SLOW MYBP-C, myosin-bin 99.3 1.3E-12 4.6E-17 97.6 6.3 88 17-105 12-110 (126)
457 2yr3_A Myosin light chain kina 99.3 1.2E-12 4E-17 94.5 5.9 91 8-104 8-98 (99)
458 1he7_A High affinity nerve gro 99.3 5.1E-12 1.7E-16 94.3 9.4 77 26-104 14-97 (126)
459 3caf_A Fibroblast growth facto 99.3 1.3E-12 4.3E-17 94.5 5.9 83 233-316 17-99 (100)
460 1waa_A Titin; metal binding pr 99.3 5E-12 1.7E-16 89.9 8.7 80 18-104 11-90 (93)
461 2ckn_A Basic fibroblast growth 99.3 5.3E-12 1.8E-16 90.3 8.7 82 16-104 13-94 (95)
462 3f8u_B Tapasin; endoplasmic re 99.3 7.4E-11 2.5E-15 105.3 17.5 172 130-313 168-399 (401)
463 1waa_A Titin; metal binding pr 99.3 2E-11 6.7E-16 86.8 11.2 89 222-318 4-92 (93)
464 2lu7_A Obscurin-like protein 1 99.3 5.1E-12 1.8E-16 87.9 7.9 78 234-318 6-83 (84)
465 2eny_A Obscurin; beta-sandwich 99.3 3.7E-12 1.3E-16 92.8 7.2 91 9-104 5-95 (104)
466 3cx2_A Myosin-binding protein 99.3 1.1E-11 3.7E-16 91.0 9.5 93 223-317 4-107 (108)
467 1fhg_A Telokin; immunoglobulin 99.3 8.2E-12 2.8E-16 98.0 9.5 94 8-104 38-132 (154)
468 1he7_A High affinity nerve gro 99.3 1.4E-11 4.7E-16 92.0 10.0 82 237-319 13-100 (126)
469 2edh_A Obscurin; structural ge 99.3 1.5E-11 5.1E-16 91.0 10.2 92 5-104 12-103 (113)
470 2edf_A Obscurin; beta-sandwich 99.3 7E-12 2.4E-16 91.1 8.3 80 18-104 14-93 (103)
471 1x44_A Myosin-binding protein 99.3 7.4E-12 2.5E-16 91.0 8.2 88 10-104 5-94 (103)
472 1pd6_A Cardiac MYBP-C;, myosin 99.3 1.6E-11 5.5E-16 89.3 9.7 88 10-104 14-102 (104)
473 1wwb_X Protein (brain derived 99.3 8.3E-12 2.8E-16 90.7 7.9 92 222-319 3-99 (103)
474 2edk_A Myosin-binding protein 99.3 4E-12 1.4E-16 92.1 6.1 80 18-104 14-97 (101)
475 1wwc_A Protein (NT-3 growth fa 99.3 7.3E-12 2.5E-16 93.5 7.7 94 5-104 2-99 (118)
476 3caf_A Fibroblast growth facto 99.3 1.8E-12 6E-17 93.7 4.2 90 11-104 4-99 (100)
477 2cry_A KIN of IRRE-like protei 99.3 7.3E-13 2.5E-17 99.6 2.0 104 204-319 5-114 (122)
478 3s35_X Vascular endothelial gr 99.3 1.4E-11 4.9E-16 92.4 9.1 92 21-123 17-118 (122)
479 2k1m_A Myosin-binding protein 99.3 1.7E-11 5.9E-16 87.6 9.0 80 18-104 14-93 (95)
480 2ckn_A Basic fibroblast growth 99.3 2.2E-11 7.4E-16 87.1 9.4 87 222-316 8-94 (95)
481 3bfo_A Mucosa-associated lymph 99.3 1.5E-11 5.1E-16 87.1 8.5 74 130-211 13-86 (91)
482 2edn_A Myosin-binding protein 99.3 2E-12 6.7E-17 95.5 3.7 94 10-104 10-114 (118)
483 2cr6_A KIAA1556 protein, obscu 99.3 3.6E-12 1.2E-16 94.7 5.0 93 6-104 7-100 (115)
484 2cpc_A KIAA0657 protein; immun 99.3 3.8E-11 1.3E-15 88.7 10.5 78 20-104 21-98 (113)
485 3cx2_A Myosin-binding protein 99.3 1.4E-11 4.7E-16 90.4 7.9 86 18-104 10-106 (108)
486 2dav_A SLOW MYBP-C, myosin-bin 99.3 1.8E-11 6.1E-16 91.4 8.5 84 234-318 17-111 (126)
487 2yuv_A Myosin-binding protein 99.3 6.2E-11 2.1E-15 85.5 11.2 92 222-320 6-97 (100)
488 2cr3_A Basic fibroblast growth 99.3 1.9E-11 6.4E-16 88.1 8.3 80 18-104 9-88 (99)
489 1i1r_A GP130, interleukin-6 re 99.3 7E-10 2.4E-14 97.1 19.9 148 129-308 13-185 (303)
490 2xot_A Amphoterin-induced prot 99.3 1.2E-11 4.2E-16 111.2 8.8 104 18-151 252-358 (361)
491 2cry_A KIN of IRRE-like protei 99.2 1.1E-12 3.9E-17 98.6 1.5 98 4-104 7-111 (122)
492 1wwc_A Protein (NT-3 growth fa 99.2 2.4E-11 8.3E-16 90.6 8.7 92 222-319 7-102 (118)
493 2dlt_A Myosin binding protein 99.2 2.5E-11 8.6E-16 88.6 8.6 83 17-104 13-95 (106)
494 1gl4_B Basement membrane-speci 99.2 4.8E-11 1.6E-15 85.7 9.9 86 12-104 10-96 (98)
495 2edf_A Obscurin; beta-sandwich 99.2 3.9E-11 1.3E-15 87.1 9.3 90 222-319 7-96 (103)
496 2edn_A Myosin-binding protein 99.2 2.2E-11 7.7E-16 89.9 7.9 85 234-319 22-117 (118)
497 3bfo_A Mucosa-associated lymph 99.2 3.9E-11 1.3E-15 85.0 8.9 76 18-104 9-85 (91)
498 2dku_A KIAA1556 protein; beta- 99.2 1E-10 3.5E-15 84.8 11.2 82 16-104 12-93 (103)
499 1x44_A Myosin-binding protein 99.2 6.3E-11 2.1E-15 86.0 9.9 80 234-319 17-97 (103)
500 2e6p_A Obscurin-like protein 1 99.2 4E-11 1.4E-15 87.2 8.7 76 22-104 20-95 (104)
No 1
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=2.9e-37 Score=270.01 Aligned_cols=278 Identities=17% Similarity=0.297 Sum_probs=219.3
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEE
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 89 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 89 (365)
.+|.+ ...+....+.+|+.++|.|.+.+.|.+ .++|++++.. +................|.|.+++.+|+|.|+|.+
T Consensus 4 ~pP~~-~~~p~~~~~~~G~~v~l~C~~~g~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 80 (284)
T 2rik_A 4 APPFF-DLKPVSVDLALGESGTFKCHVTGTAPI-KITWAKDNRE-IRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYA 80 (284)
T ss_dssp CCCEE-EECCCCEEEETTCCEEEEEEEESSSCC-EEEEEETTEE-CCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEE-EccccceEecCCCcEEEEEEEEcCCCC-EEEEEECCEE-CcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEE
Confidence 34444 445566778999999999998788988 9999999988 66554433333334568999999999999999999
Q ss_pred EeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCc
Q psy3823 90 RNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAG 169 (365)
Q Consensus 90 ~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~ 169 (365)
.+..+.....+.|.| ..+|.+...+. ....+.+|+.+.|.|.+.+.|.+. +.|++++..+.......
T Consensus 81 ~n~~g~~~~~~~l~V---------~~~p~~~~~~~---~~~~v~~g~~~~l~C~~~g~p~~~-v~W~~~~~~~~~~~~~~ 147 (284)
T 2rik_A 81 SNVAGKDSCSAQLGV---------QEPPRFIKKLE---PSRIVKQDEHTRYECKIGGSPEIK-VLWYKDETEIQESSKFR 147 (284)
T ss_dssp EETTEEEEEEEEEEE---------ECCCEEEECCC---SEEEEETTCCEEEEEEEESSSCCE-EEEEETTEECCCSSSEE
T ss_pred EECCceEEEEEEEEc---------cCCCcccccCC---CceEecCCceEEEEEEEeeeCCCE-EEEEECCEECcCCCcEE
Confidence 998887778888888 56776554332 234578999999999999988776 99999999887544322
Q ss_pred eEE--eeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEE
Q psy3823 170 RII--TNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCT 247 (365)
Q Consensus 170 ~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 247 (365)
... ....|.|.+++..|+|.|+|.+.|..|... ..+.|.|. .+|.+...+.. ..+..|+.+.|.|.
T Consensus 148 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~----------~~p~~~~~~~~-~~~~~g~~v~l~C~ 215 (284)
T 2rik_A 148 MSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSAS-SSTSLKVK----------EPPVFRKKPHP-VETLKGADVHLECE 215 (284)
T ss_dssp EEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEE-EEEEEEEE----------CCCBCCSCCCC-EEECTTCCEEEEEE
T ss_pred EEEcCCEEEEEECCCCcccCEEEEEEEEcCCCcee-EEEEEEEe----------cCCcceeCCCc-ceecCCCeEEEEEE
Confidence 222 256799999999999999999999988654 67788888 78877654433 33789999999999
Q ss_pred EeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 248 VDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 248 ~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
+.+.|.+. +.|++++.... .........++....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 216 ~~g~p~~~-v~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 216 LQGTPPFQ-VSWHKDKRELR-SGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp CBSSSCCE-EEEEETTEEEC-BTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEecCCCE-EEEEECCEECc-CCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 99999998 99999886433 2334444555666789999999999999999999999999988888775
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=1e-36 Score=292.22 Aligned_cols=289 Identities=16% Similarity=0.294 Sum_probs=225.1
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCe
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G 83 (365)
|.+.....|......+....+.+|+.++|.|.+.+.|.+ .++|+|++.. +................|.|.+++.+|+|
T Consensus 189 l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p-~i~W~k~g~~-i~~~~~~~~~~~~~~~~L~i~~v~~~D~G 266 (570)
T 3b43_A 189 LTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPI-KITWAKDNRE-IRPGGNYKMTLVENTATLTVLKVTKGDAG 266 (570)
T ss_dssp EEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCC-EEEEEETTEE-CCTTSSEEEEEETTEEEEEESSBCGGGCE
T ss_pred EEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCC-EEEEEECCEE-CcCCCcEEEEEECCEEEEEEcccCcccCE
Confidence 334433333334444455667899999999998889999 9999999988 65544433322333458999999999999
Q ss_pred EEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEe
Q psy3823 84 TLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITIS 163 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~ 163 (365)
.|+|.|.|..|.....+.|.| ..+|.+...+. ....+.+|+.+.|.|.+.|.|.+. +.|++++..+.
T Consensus 267 ~Y~C~a~N~~g~~~~~~~l~V---------~~~p~~~~~~~---~~~~v~~g~~~~l~C~~~g~P~p~-v~W~k~~~~l~ 333 (570)
T 3b43_A 267 QYTCYASNVAGKDSCSAQLGV---------QEPPRFIKKLE---PSRIVKQDEHTRYECKIGGSPEIK-VLWYKDETEIQ 333 (570)
T ss_dssp EEEEEEEETTEEEEEEEEECC---------BCCCEEEECCC---SBCCEESSCEEEEEEEEESSSSCE-EEEEETTEECC
T ss_pred EEEEEEECCCCcEEEEEEEEe---------ecCCcccccCC---CccEEcCCCcEEEEEEEeeCCCCE-EEEeECCEECC
Confidence 999999999988878888888 66777654332 223578999999999999998887 99999999987
Q ss_pred eCCCCceEEe--eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCce
Q psy3823 164 NNASAGRIIT--NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQ 241 (365)
Q Consensus 164 ~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~ 241 (365)
.......... ...|.|.+++.+|+|.|+|.|.|..|... ..+.|.|. .+|.+...+... .+..|+.
T Consensus 334 ~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~-~~~~l~V~----------~~P~~~~~~~~~-~~~~G~~ 401 (570)
T 3b43_A 334 ESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSAS-SSTSLKVK----------EPPVFRKKPHPV-ETLKGAD 401 (570)
T ss_dssp CSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCE-EEEEECEE----------CCCEECSCCCCE-EECTTCC
T ss_pred CCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEE-EEEEEEec----------CCCeeecCCCce-eecCCCE
Confidence 5443322222 46799999999999999999999999765 57788888 888776554443 3788999
Q ss_pred EEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCcc
Q psy3823 242 VLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAGE 321 (365)
Q Consensus 242 ~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 321 (365)
+.|.|.+.|.|.|. +.|+++|.... ...+..+..++....|.|.++..+|+|.|+|.|.|..|.....+.|.|..++.
T Consensus 402 v~l~C~~~g~P~p~-v~W~k~g~~l~-~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~ 479 (570)
T 3b43_A 402 VHLECELQGTPPFQ-VSWHKDKRELR-SGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPR 479 (570)
T ss_dssp EEEEEEEESSSSCC-CEEEETTEECC-SSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCE
T ss_pred EEEEEEEecCCCCE-EEEEECCEECc-CCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCc
Confidence 99999999999998 99999987443 33444555556667799999999999999999999999998888888865544
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=4.7e-37 Score=294.57 Aligned_cols=285 Identities=15% Similarity=0.274 Sum_probs=228.5
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCe
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G 83 (365)
+.+.+.++|.+.........+.+|+.+.|.|.+.+.|.+ .++|+|++.. +................|.|.+++.+|+|
T Consensus 283 ~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p-~v~W~k~~~~-l~~~~~~~~~~~~~~~~L~i~~v~~~D~G 360 (570)
T 3b43_A 283 AQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEI-KVLWYKDETE-IQESSKFRMSFVESVAVLEMYNLSVEDSG 360 (570)
T ss_dssp EEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSC-EEEEEETTEE-CCCSSSEEEEEETTEEEEEEESCCGGGCE
T ss_pred EEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCC-EEEEeECCEE-CCCCCcEEEEEECCEEEEEECCCCcccCE
Confidence 456677888877654444557899999999998899999 9999999998 76555433333344568999999999999
Q ss_pred EEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEe
Q psy3823 84 TLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITIS 163 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~ 163 (365)
.|+|.|.|..|.....+.|.| ..+|.+...+ ....+.+|+++.|.|.+.|.|.+. +.|+++|..+.
T Consensus 361 ~Y~C~a~N~~g~~~~~~~l~V---------~~~P~~~~~~----~~~~~~~G~~v~l~C~~~g~P~p~-v~W~k~g~~l~ 426 (570)
T 3b43_A 361 DYTCEAHNAAGSASSSTSLKV---------KEPPVFRKKP----HPVETLKGADVHLECELQGTPPFQ-VSWHKDKRELR 426 (570)
T ss_dssp EEEEEEEBTTBCCEEEEEECE---------ECCCEECSCC----CCEEECTTCCEEEEEEEESSSSCC-CEEEETTEECC
T ss_pred EEEEEEEeCCCEEEEEEEEEe---------cCCCeeecCC----CceeecCCCEEEEEEEEecCCCCE-EEEEECCEECc
Confidence 999999999998888888998 6677654433 334577899999999999999888 99999999886
Q ss_pred eCCCCceEEe--eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCce
Q psy3823 164 NNASAGRIIT--NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQ 241 (365)
Q Consensus 164 ~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~ 241 (365)
.......... ..+|.|.++...|+|.|+|.|.|..|... ..+.|.|. .+|.+....... .+..|+.
T Consensus 427 ~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~-~~~~l~v~----------~~P~~~~~~~~~-~~~~g~~ 494 (570)
T 3b43_A 427 SGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDT-CVGSITLK----------APPRFVKKLSDI-STVVGEE 494 (570)
T ss_dssp SSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEE-EEEEEEEC----------CCCEEEECCCCB-CCBTTCC
T ss_pred CCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEE-EEEEEEec----------cCCcccccCCCc-eecCCCe
Confidence 5433222222 25799999999999999999999999765 56778888 888877655443 3789999
Q ss_pred EEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 242 VLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 242 ~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
+.|.|.+.|.|++. +.|++++...........+...+....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 495 ~~l~c~~~g~p~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 495 VQLQATIEGAEPIS-VAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp EEEEEEEESCSSCC-CEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred EEEEEEEecCCCCE-EEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 99999999999998 9999997544444444444445667789999999999999999999999999999988774
No 4
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=6.1e-35 Score=256.04 Aligned_cols=276 Identities=16% Similarity=0.246 Sum_probs=205.8
Q ss_pred eCCceEEEEecCCcEEEEEEeCCCC-CcceEEEEe-CCCcCCCCCC-cee-EecCCeEEEEEEccCCCCCCeEEEEEEEe
Q psy3823 16 QSQQRIYGALRNEQVLVSCTVDANP-QAQYFTWAF-NNSGTAPRPL-TSY-SIQDGSTSVARYTPTSELEYGTLLCWARN 91 (365)
Q Consensus 16 ~~~~~~~~v~~G~~~~l~C~~~~~p-~~~~v~W~~-~~~~~l~~~~-~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~ 91 (365)
...+....+.+|+.++|.|.+.+.| .+ .++|++ ++.. +.... ... ...+.....|.|.+++.+|+|.|+|.+.+
T Consensus 6 ~~~p~~~~v~~G~~v~l~C~~~~~~~~~-~i~W~~~~g~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 83 (291)
T 1qz1_A 6 DIVPSQGEISVGESKFFLCQVAGDAKDK-DISWFSPNGEK-LSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTA 83 (291)
T ss_dssp EEESSSEEEETTCCEEEEEEESSCCSCC-EEEEECTTSCB-CCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EecCCCceEeCCCeEEEEEEeCCCCCCc-EeEEECCCCeE-CccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEc
Confidence 3345556689999999999987776 56 999999 6666 54332 222 22234456899999999999999999999
Q ss_pred CCCCC-cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCce
Q psy3823 92 EQGNQ-RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGR 170 (365)
Q Consensus 92 ~~~~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~ 170 (365)
..+.. ...+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+........
T Consensus 84 ~~g~~~~~~~~l~v---------~~~~~~~~~~----~~~~~~~g~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~ 149 (291)
T 1qz1_A 84 EDGTQSEATVNVKI---------FQKLMFKNAP----TPQEFKEGEDAVIVCDVVSSLPPT-IIWKHKGRDVILKKDVRF 149 (291)
T ss_dssp TTSCEEEEEEEEEE---------ECCSEEEECC----SSEEEETTSCEEECCEEECSSCCE-EEEEETTSCSSTTCCTTE
T ss_pred CCCCeeEEEEEEEe---------eccccccCCC----CcccccCCCeEEEEEEeccCCCCE-EEEEECCEEcccCCCceE
Confidence 87643 36778888 5567655544 334688999999999999988876 999999988754333332
Q ss_pred -EEeeceEEEeeecCCCCeEEEEEEEcCCC-CCCcccEEEEEeeeeecccccCCCCceecCc-cceeeeecCceEEEEEE
Q psy3823 171 -IITNQTLVLQSVTRHSGGLYACSAINSQG-EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQ-QRIYGALRNEQVLVSCT 247 (365)
Q Consensus 171 -~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~-~~~~~~~~g~~~~l~C~ 247 (365)
...+..|.|.++...|+|.|+|.+.|..+ ......+.+.|. .+|.+.... .....+..|+.+.|.|.
T Consensus 150 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~----------~~p~~~~~~~~~~~~~~~g~~v~l~C~ 219 (291)
T 1qz1_A 150 IVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVN----------VPPTVQARQSIVNATANLGQSVTLVCD 219 (291)
T ss_dssp EECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEE----------EEEEEEESCSEEEEETTSCCCEEEEEE
T ss_pred EEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEe----------cCCcccccccccccccccCceEEEEEE
Confidence 33467899999999999999999998764 333355677777 666655432 22334788999999999
Q ss_pred EeeeCCCceeEEEeCCCCCCCCCC-ceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEc
Q psy3823 248 VDANPQAQYFTWAFNNSDTAPRPL-TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 248 ~~~~p~~~~~~W~~~~~~~~~~~~-~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
+.+.|.|. +.|+++|........ ..++......+.|.|.++..+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 220 ~~g~p~p~-i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 220 ADGFPEPT-MSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp EEEESCCE-EEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEeCCCc-EEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 99999998 999999875433221 11222223335799999999999999999999999999999998864
No 5
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=255.33 Aligned_cols=285 Identities=17% Similarity=0.268 Sum_probs=200.3
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeE-ecCCeEEEEEEccCCC-CCCeEEEE
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYS-IQDGSTSVARYTPTSE-LEYGTLLC 87 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~-~~~~~~~~l~i~~~~~-~d~G~Y~C 87 (365)
.+|.+.. .+....+.+|+.++|.|.+.+.|.+ .++|++++.. +........ ..++....|.|.+++. +|+|.|+|
T Consensus 5 ~~P~~~~-~p~~~~v~~G~~v~l~C~~~g~p~~-~i~W~k~g~~-i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C 81 (304)
T 2yd9_A 5 EPPRFIK-EPKDQIGVSGGVASFVCQATGDPKP-RVTWNKKGKK-VNSQRFETIEFDESAGAVLRIQPLRTPRDENVYEC 81 (304)
T ss_dssp CCCEEEE-CCCCEEEETTSCEEEEEEEECSSCC-EEEEC--------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEE
T ss_pred cCCeeee-cCCceEecCCCeEEEEEEEEEeCCC-eEEEEECCEE-CCCCceEEEEecCCCceEEEEecccccCCCeEEEE
Confidence 4565543 4456678999999999998889999 9999999988 655443222 2445557899999998 99999999
Q ss_pred EEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCC
Q psy3823 88 WARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNAS 167 (365)
Q Consensus 88 ~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~ 167 (365)
.|.+..+.....+.|.|..... .+...|.+...+ ....+.+|+.+.|.|.+.|.|.+. +.|++++..+.....
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~--~p~~~p~i~~~~----~~~~v~~g~~v~l~C~~~g~p~~~-v~W~k~~~~~~~~~~ 154 (304)
T 2yd9_A 82 VAQNSVGEITVHAKLTVLREDQ--LPSGFPNIDMGP----QLKVVERTRTATMLCAASGNPDPE-ITWFKDFLPVDPSAS 154 (304)
T ss_dssp EEECSSCEECCEEEEEEECGGG--CCTTCCEEEECC----CCEEEETTSCEEECCEEECSSCCE-EEEEETTEECCGGGG
T ss_pred EEECCCCeEEEEEEEEEecccc--CCCCCCeeecCC----ccEEEeCCCeEEEEEECccCCCCe-EEEEECCEECcCCCC
Confidence 9999988877888888843211 011125555443 334678899999999999988876 999999998865332
Q ss_pred Cc--eEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEE
Q psy3823 168 AG--RIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVS 245 (365)
Q Consensus 168 ~~--~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 245 (365)
.. ....++.|.|.+++.+|+|.|+|.+.|..|...+....+.|... ..+|.+...+.. ..+..|+.+.|.
T Consensus 155 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~-------~~~P~~~~~~~~-~~v~~G~~v~l~ 226 (304)
T 2yd9_A 155 NGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQ-------NVAPRFSILPMS-HEIMPGGNVNIT 226 (304)
T ss_dssp TTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC-------CEEEEEEECCCC-BCCCTTCCEEEE
T ss_pred cceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEee-------ccCCcEEecCCc-eEEcCCCeEEEE
Confidence 21 23336689999999999999999999998865544455655410 034444433333 337899999999
Q ss_pred EEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCc
Q psy3823 246 CTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 246 C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 320 (365)
|.+.|.|.|. +.|+++|........ .......|.|.++ +|+|.|+|.|.|..|..+.++.|.|...+
T Consensus 227 C~~~g~p~p~-v~W~~~~~~l~~~~~-----~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 293 (304)
T 2yd9_A 227 CVAVGSPMPY-VKWMQGAEDLTPEDD-----MPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLP 293 (304)
T ss_dssp EEEEEESCCE-EEEEETTEECSCSSS-----CCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-----
T ss_pred EEEeeeCCCE-EEEEECCEECCCccc-----ccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCc
Confidence 9999999998 999999864432211 1123446777776 69999999999999999999999887653
No 6
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=253.19 Aligned_cols=274 Identities=15% Similarity=0.235 Sum_probs=201.3
Q ss_pred eCCceEEEEecCCcEEEEEEeCCCCCcceEEEEe-CCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 16 QSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAF-NNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 16 ~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~-~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
...+....+.+|+.++|.|.+.+.| + .+.|++ ++.. +..........++....|.|.+++.+|+|.|+|.+.+..+
T Consensus 8 ~~~~~~~~v~~G~~v~l~C~~~~~p-~-~v~W~~~~g~~-~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g 84 (291)
T 2wim_A 8 TISLSKVELSVGESKFFTCTAIGEP-E-SIDWYNPQGEK-IISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 84 (291)
T ss_dssp EESCSEEEEETTCCEEEEEEEESCC-S-EEECBCTTCCB-CCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSS
T ss_pred EEeccceEecCCCcEEEEEEEeCCC-C-ceEEECCCCcC-ccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccC
Confidence 3445567789999999999977766 4 899999 5655 6554444444455567899999999999999999999877
Q ss_pred CCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCce-EE
Q psy3823 95 NQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGR-II 172 (365)
Q Consensus 95 ~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~-~~ 172 (365)
... ..+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+........ ..
T Consensus 85 ~~~~~~~~l~v---------~~~~~~~~~~----~~~~v~~G~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~ 150 (291)
T 2wim_A 85 QTQEATVVLEI---------YQKLTFREVV----SPQEFKQGEDAEVVCRVSSSPAPA-VSWLYHNEEVTTISDNRFAML 150 (291)
T ss_dssp CEEEEEEEEEE---------ECCCBCCSCC----CSEEEETTSCEEECCCCBCSSCCE-EEEECC----CBCCCSSEEEC
T ss_pred ceEEEEEEEEe---------cCCcceEeCC----CChhhcCCCCEEEEEEEccCCCCE-EEEEECCccccccCCceEEEc
Confidence 654 5677777 4444432222 334678999999999999988777 999999988765333332 33
Q ss_pred eeceEEEeeecCCCCeEEEEEEEcCCCC-CCcccEEEEEeeeeecccccCCCCceecCcc-ceeeeecCceEEEEEEEee
Q psy3823 173 TNQTLVLQSVTRHSGGLYACSAINSQGE-GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQ-RIYGALRNEQVLVSCTVDA 250 (365)
Q Consensus 173 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~-~~~~~~~g~~~~l~C~~~~ 250 (365)
.+..|.|.++...|+|.|+|.+.+..+. .....+.+.+. .+|.+..... ....+..|+.+.|.|.+.+
T Consensus 151 ~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~----------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 220 (291)
T 2wim_A 151 ANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN----------VPPAISMPQKSFNATAERGEEMTFSCRASG 220 (291)
T ss_dssp TTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEE----------BCCCCBCSCSEEECCSSSCCEEEEECBCCC
T ss_pred cCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEec----------cCCccccCcccccceecCCCeEEEEEEeec
Confidence 4678999999999999999999988753 33345667777 6776654332 1233788999999999999
Q ss_pred eCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCc
Q psy3823 251 NPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 251 ~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 320 (365)
.|.+. +.|+++|..... ....... .....|.|.++..+|+|.|+|.|.|..|..+.++.|.|..++
T Consensus 221 ~p~p~-v~W~~~g~~~~~-~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 221 SPEPA-ISWFRNGKLIEE-NEKYILK--GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp BSCCE-EEEEETTEECCC-TTTEEEC--STTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC----
T ss_pred CCCCe-EEEEECCEECcC-CccEEEc--CCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEec
Confidence 99998 999999874432 2223222 223469999999999999999999999999999999887654
No 7
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-33 Score=257.54 Aligned_cols=279 Identities=18% Similarity=0.301 Sum_probs=210.8
Q ss_pred eecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCC---CceeEecCCeEEEEEEccCCCCCC
Q psy3823 6 FNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRP---LTSYSIQDGSTSVARYTPTSELEY 82 (365)
Q Consensus 6 ~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~---~~~~~~~~~~~~~l~i~~~~~~d~ 82 (365)
+.+..+|.. ...+....+.+|+.+.|.|.+.+.|.+ .++|++++.. +... .......++ .|.|.+++.+|+
T Consensus 116 l~v~~p~~~-~~~~~~~~~~~G~~v~l~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~---~L~i~~~~~~d~ 189 (403)
T 3laf_A 116 VMVAGPLRF-LSQTESITAFMGDTVLLKCEVIGDPMP-TIHWQKNQQD-LNPIPGDSRVVVLPSG---ALQISRLQPGDS 189 (403)
T ss_dssp EEECCCCEE-CSCCCCEEEETTSCEEECCCEECSSCC-EEEEEESSSB-CCCCTTCCSEEECTTS---CEEECSCCGGGC
T ss_pred EEecCCCcc-ccCCCcEEEEcCCeEEEEEEEcccCCC-eEEEEECCEe-ccccCCceEEEEcCCc---eEEEcccccccC
Confidence 334444443 334456678899999999998788999 9999999987 6422 222222334 799999999999
Q ss_pred eEEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCe----EEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe
Q psy3823 83 GTLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPS----VQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH 157 (365)
Q Consensus 83 G~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~ 157 (365)
|.|+|.+.+..+... ..+.+.|. ..|. ..+.... ....+.+|+.+.|.|.+.+.|.+. +.|++
T Consensus 190 G~Y~C~~~n~~~~~~~~~~~l~v~---------~~p~~~~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~~-~~W~~ 257 (403)
T 3laf_A 190 GVYRCSARNPASTRTGNEAEVRIL---------SDPGLHRQLYFLQRP--SNVIAIEGKDAVLECCVSGYPPPS-FTWLR 257 (403)
T ss_dssp EEEEEEEECSSCCCBCCCEEEEEE---------CCCCCCEEEEEEECC--CCEEEETTSCEEECCEEEEESCCE-EEEEE
T ss_pred EEEEEEEEcCCCceeccceeEEEe---------cCCCcccCceEecCC--CceEecCCCcEEEEEEcCCCCCCe-EEEEE
Confidence 999999999877644 66777773 2221 1111111 334678999999999999988886 99999
Q ss_pred CCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeee
Q psy3823 158 NGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGAL 237 (365)
Q Consensus 158 ~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~ 237 (365)
++..+...........+..|.|.++..+|+|.|+|.+.|..|... ..+.|.|. .+|.+...+.... +.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~----------~~p~~~~~~~~~~-~~ 325 (403)
T 3laf_A 258 GEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENIS-ASAELTVL----------VPPWFLNHPSNLY-AY 325 (403)
T ss_dssp TTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEE-EEEEEEEE----------EEEEEEECCCCEE-CC
T ss_pred CCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceE-EEEEEEEE----------CCCcEeecCcceE-Ee
Confidence 999887544444444567899999999999999999999987654 67788888 6777665554433 78
Q ss_pred cCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 238 RNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 238 ~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
.|+.+.|.|.+.+.|.+. +.|+++|..... ......... +.|.|.++..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 326 ~g~~v~l~C~~~g~p~p~-v~W~~~g~~~~~-~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 400 (403)
T 3laf_A 326 ESMDIEFECAVSGKPVPT-VNWMKNGDVVIP-SDYFQIVGG---SNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVP 400 (403)
T ss_dssp TTCCEEECCEEEEESCCE-EEEEETTEECCC-SSSEEEETT---TEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECC
T ss_pred cCCeEEEEEEEeeccCCE-EEEEECCEECCC-CCcEEEecC---ccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEe
Confidence 999999999999999998 999999875432 222222222 359999999999999999999999999999888876
Q ss_pred cC
Q psy3823 318 KA 319 (365)
Q Consensus 318 ~~ 319 (365)
.+
T Consensus 401 ~P 402 (403)
T 3laf_A 401 KP 402 (403)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 8
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=255.32 Aligned_cols=289 Identities=13% Similarity=0.158 Sum_probs=197.9
Q ss_pred cccCCeEeeCCceEEEEecCCcEEEEEEeCCC-CCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEE
Q psy3823 8 STDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLL 86 (365)
Q Consensus 8 ~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 86 (365)
...+|.+.. +....+.+|+.++|.|.+.+. |.+ .++|++++.. +......... .....|.|.+++.+|+|.|+
T Consensus 4 ~~~~P~~~~--~~~~~v~~G~~v~l~C~~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~ 77 (317)
T 2y25_A 4 PFTGPHFVE--YLSWEVTGECNVLLKCKVANIKKET-HIVWYKDERE-ISVDEKHDFK--DGICTLLITEFSKKDAGIYE 77 (317)
T ss_dssp SSSCCEEEE--EEEEEEETTTEEEEEEEEESCCTTC-EEEEEETTEE-ECCSCC-------CCEEEEETTCCSTTCSCEE
T ss_pred ccCCCcEee--eeeEEECCCCeEEEEEEEcCCCCCC-EEEEEECCeE-cCCCCcEEEE--CCeEEEEEccCCcccCeEEE
Confidence 345676653 345788999999999996666 777 9999999988 6644332221 22258999999999999999
Q ss_pred EEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe----------cCCCCeeEEE
Q psy3823 87 CWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA----------NPPYKKLIWT 156 (365)
Q Consensus 87 C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~----------~p~~~~i~W~ 156 (365)
|.+.+..+.....+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.+ .|.+. +.|+
T Consensus 78 C~~~n~~g~~~~~~~l~v---------~~~~~~~~~~----~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~-i~W~ 143 (317)
T 2y25_A 78 VILKDDRGKDKSRLKLVD---------EAFKELMMEV----CKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLK-VNWS 143 (317)
T ss_dssp EEEESSSCEEEEEECCST---------HHHHHHHHHH----HHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCE-EEEE
T ss_pred EEEECCCCcEEEEEEEEE---------ecCccccccC----CceecccCCCeEEEeeccccEEEEEeccCCCCcE-EEEE
Confidence 999988876555555544 2222111111 1223456666666666555 45555 9999
Q ss_pred eCCeEEeeCCCCceEEe--eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeee----------eecccccCCCC
Q psy3823 157 HNGITISNNASAGRIIT--NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKM----------VNLIFNSIDEP 224 (365)
Q Consensus 157 ~~~~~l~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~----------~~~~~~~~~~p 224 (365)
+++..+........... ...|.|.+++..|+|.|+|.+.|..|... ..+.+.+... ..+.+.....|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p 222 (317)
T 2y25_A 144 HNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQ-KTVDLSGQAYDEAYAEFQRLKQAAIAEKNRA 222 (317)
T ss_dssp ESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEE-EEEEECHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred ECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEE-EEEEEeeeeccccchhhcccCCcccCcCCCC
Confidence 99988865433222222 24599999999999999999999877544 3444443210 00011112344
Q ss_pred ceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeC-CCEEEEEEcCCCcccCeEEEEEEEc
Q psy3823 225 VCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQD-GSTSVARYTPTSELEYGTLLCWARN 303 (365)
Q Consensus 225 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~s~l~i~~v~~~d~G~Y~C~a~n 303 (365)
.+.........+..|+.+.|.|.+.|.|.+. +.|+++|..... .....+... +..+.|.|.+++.+|+|.|+|.|.|
T Consensus 223 ~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-i~W~~~g~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 300 (317)
T 2y25_A 223 RVLGGLPDVVTIQEGKALNLTCNVWGDPPPE-VSWLKNEKALAS-DDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKN 300 (317)
T ss_dssp EEEEBCCSEEEEETTSBBCEEEEEECSSCCE-EEEEESSSEECC-CSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEE
T ss_pred cccccCCccEEEEcCCEEEEEEEEecCCCCE-EEEEECCEeCCC-CCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 4444333444588999999999999999998 999999875432 333444333 6677899999999999999999999
Q ss_pred CCccceecEEEEEEcC
Q psy3823 304 EQGSQRTPCTFHVVKA 319 (365)
Q Consensus 304 ~~g~~~~~~~l~v~~~ 319 (365)
..|..+..+.|.|..+
T Consensus 301 ~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 301 KYGSETSDFTVSVFIP 316 (317)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEcC
Confidence 9999999999988754
No 9
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=4e-32 Score=257.86 Aligned_cols=291 Identities=15% Similarity=0.126 Sum_probs=213.3
Q ss_pred EeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEe-CCCcCCCCCCceeEecCCeEEEEEEccCCCCCCe
Q psy3823 5 IFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAF-NNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 5 ~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~-~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G 83 (365)
.+.+..+|... ..+....+.+|+.++|.|.+.+.|.+ .++|++ ++.. +..........++ .|.|.+++.+|.|
T Consensus 108 ~l~V~~p~~~~-~~~~~~~v~~G~~v~l~C~~~~~~~~-~v~W~~~~g~~-l~~~~~~~~~~~~---~L~i~~~~~~d~G 181 (524)
T 2ec8_A 108 YVFVRDPAKLF-LVDRSLYGKEDNDTLVRCPLTDPEVT-NYSLKGCQGKP-LPKDLRFIPDPKA---GIMIKSVKRAYHR 181 (524)
T ss_dssp EEECCCSSCSB-CCCCCCCEETTSCEEECCCBSCCCCS-CEEEECSSSCC-CCSSCEEEEETTT---EEEEESCCGGGTT
T ss_pred EEEECCCCccc-ccccceEEEcCCeEEEECcCCCCccc-eEEEEccCCcC-cCCCCceeECCCc---cEEEeccchhhCC
Confidence 44455555443 44555678899999999998776657 999998 6666 6554443444445 7999999999999
Q ss_pred -EEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeE
Q psy3823 84 -TLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGIT 161 (365)
Q Consensus 84 -~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~ 161 (365)
.|+|.|.+..+... ..+.|.|... +..+|.+...+ ....+.+|+.+.|.|.+.+.|.+..+.|++++..
T Consensus 182 ~~Y~C~a~n~~~~~~s~~~~l~V~~~-----~~~~p~i~~~~----~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~ 252 (524)
T 2ec8_A 182 LCLHCSVDQEGKSVLSEKFILKVRPA-----FKAVPVVSVSK----ASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQ 252 (524)
T ss_dssp CEEEEEEC----CCCCCCEECCEECC-----CCSCCEEECSC----SEEEEETTSCEEEEEEEEESSTTCEEEEEETTCS
T ss_pred ceEEEEEEECCceEEEEEEEEEEEeC-----CCCCCcEEecC----CcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCC
Confidence 99999998876654 4788888310 12466665544 3346889999999999999888777999999877
Q ss_pred E--eeCCC-----CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCc--cc
Q psy3823 162 I--SNNAS-----AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQ--QR 232 (365)
Q Consensus 162 l--~~~~~-----~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~--~~ 232 (365)
+ ..... .........|.|.+++.+|+|.|+|.+.|..|... ..+.|.|. .+|.+...+ ..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~----------~~p~~~~~~~~~~ 321 (524)
T 2ec8_A 253 TKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSAN-VTTTLEVV----------DKGFINIFPMINT 321 (524)
T ss_dssp CCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEE-EEEEEEEE----------SSCEEEEEESSCS
T ss_pred CccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceE-EEEEEEEe----------ccCceEeecCCCc
Confidence 3 21110 11233467899999999999999999999988765 47888998 788765432 22
Q ss_pred eeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCC----CEEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 233 IYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDG----STSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 233 ~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~----~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
...+..|+.+.|.|.+.+.|.|..+.|+++|.........+....++ ..+.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 322 ~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 401 (524)
T 2ec8_A 322 TVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNA 401 (524)
T ss_dssp EEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred eEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceE
Confidence 34488999999999999998885599999987554333222222222 35689999999999999999999999999
Q ss_pred eecEEEEEEcCcc
Q psy3823 309 RTPCTFHVVKAGE 321 (365)
Q Consensus 309 ~~~~~l~v~~~~~ 321 (365)
+.++.|.|..++.
T Consensus 402 ~~~~~l~V~~~P~ 414 (524)
T 2ec8_A 402 AIAFNVYVNTKPE 414 (524)
T ss_dssp EEEEEEEECEEEE
T ss_pred EEEEEEEEecCCe
Confidence 8888888865443
No 10
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=7.3e-32 Score=247.36 Aligned_cols=275 Identities=14% Similarity=0.221 Sum_probs=201.3
Q ss_pred eEeeCCceEEEEecCCcEEEEEEeCC-CCCcceEEEEeCCCcCCCCCCc--eeEecCCeEEEEEEccC-----CCCCCeE
Q psy3823 13 VCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNNSGTAPRPLT--SYSIQDGSTSVARYTPT-----SELEYGT 84 (365)
Q Consensus 13 ~~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~~~v~W~~~~~~~l~~~~~--~~~~~~~~~~~l~i~~~-----~~~d~G~ 84 (365)
.....++....+.+|+.++|.|.+.+ .|.+ .++|+|++.. +..... .....++ .|.|.++ +.+|+|.
T Consensus 22 ~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~-~v~W~k~g~~-~~~~~~~~~~~~~~~---~l~i~~~~~~~~~~~D~G~ 96 (403)
T 3laf_A 22 LHFVSEPSDAVTMRGGNVLLNCSAESDRGVP-VIKWKKDGLI-LALGMDDRKQQLPNG---SLLIQNILHSRHHKPDEGL 96 (403)
T ss_dssp SEEEECCCCEEECTTCCEEECCEEECTTCCC-EEEEEETTEE-CCTTSCTTEEECTTS---CEEECSCCCBTTBCSSCEE
T ss_pred EEEEeCCCceEEecCCcEEEEEEcCCCCCCc-eEEEEECCEE-CccCCcccEEEecCC---cEEEeeeeccCCCCCcceE
Confidence 33445667788899999999999544 6777 9999999987 654322 2233444 4666666 7789999
Q ss_pred EEEEEEeCCCCC--cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEE
Q psy3823 85 LLCWARNEQGNQ--RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITI 162 (365)
Q Consensus 85 Y~C~a~~~~~~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l 162 (365)
|+|.+.+..+.. ...+.+.| ..+|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+
T Consensus 97 Y~C~~~~~~~~~~~s~~~~l~v---------~~p~~~~~~~----~~~~~~~G~~v~l~C~~~~~p~~~-v~W~~~~~~~ 162 (403)
T 3laf_A 97 YQCEASLGDSGSIISRTAKVMV---------AGPLRFLSQT----ESITAFMGDTVLLKCEVIGDPMPT-IHWQKNQQDL 162 (403)
T ss_dssp EEEEEECGGGCEEECCCEEEEE---------CCCCEECSCC----CCEEEETTSCEEECCCEECSSCCE-EEEEESSSBC
T ss_pred EEEEEEeCCCccEEEEEEEEEe---------cCCCccccCC----CcEEEEcCCeEEEEEEEcccCCCe-EEEEECCEec
Confidence 999998644332 36677877 4555543222 335688999999999999988876 9999999887
Q ss_pred eeCCCC--ceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCcee-----cCccceee
Q psy3823 163 SNNASA--GRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCK-----QSQQRIYG 235 (365)
Q Consensus 163 ~~~~~~--~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~-----~~~~~~~~ 235 (365)
...... .....++.|.|.+++.+|+|.|+|.+.|..+...+..+.+.|. ..|.+. ........
T Consensus 163 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~----------~~p~~~~~~~~~~~~~~~~ 232 (403)
T 3laf_A 163 NPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRIL----------SDPGLHRQLYFLQRPSNVI 232 (403)
T ss_dssp CCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEE----------CCCCCCEEEEEEECCCCEE
T ss_pred cccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEe----------cCCCcccCceEecCCCceE
Confidence 532221 1223367899999999999999999999888766567788887 555321 11122233
Q ss_pred eecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEE
Q psy3823 236 ALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFH 315 (365)
Q Consensus 236 ~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 315 (365)
+..|+.+.|.|.+.+.|.+. +.|++++..............+ ..|.|.++..+|+|.|+|.|.|..|..+.++.|.
T Consensus 233 ~~~g~~~~l~C~~~~~p~~~-~~W~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 308 (403)
T 3laf_A 233 AIEGKDAVLECCVSGYPPPS-FTWLRGEEVIQLRSKKYSLLGG---SNLLISNVTDDDSGTYTCVVTYKNENISASAELT 308 (403)
T ss_dssp EETTSCEEECCEEEEESCCE-EEEEETTEECCCSSSSEEEETT---TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ecCCCcEEEEEEcCCCCCCe-EEEEECCeeccCCCceEEECCc---cEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEE
Confidence 78999999999999999998 9999988754333333322222 2599999999999999999999999998888888
Q ss_pred EEcCc
Q psy3823 316 VVKAG 320 (365)
Q Consensus 316 v~~~~ 320 (365)
|..++
T Consensus 309 V~~~p 313 (403)
T 3laf_A 309 VLVPP 313 (403)
T ss_dssp EEEEE
T ss_pred EECCC
Confidence 86543
No 11
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=7.2e-32 Score=269.25 Aligned_cols=287 Identities=15% Similarity=0.250 Sum_probs=215.5
Q ss_pred eecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeE----e-cCCeEEEEEEccCCCC
Q psy3823 6 FNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYS----I-QDGSTSVARYTPTSEL 80 (365)
Q Consensus 6 ~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~----~-~~~~~~~l~i~~~~~~ 80 (365)
+...+.|...........+.+|+.+.|.|.+.++|.+ .++|++++.. +........ . .....+.|.|.+++.+
T Consensus 423 v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p-~v~W~~~g~~-l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 500 (816)
T 3dmk_A 423 LGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTP-EISWELDGKK-IANNDRYQVGQYVTVNGDVVSYLNITSVHAN 500 (816)
T ss_dssp CCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCC-EEEEEETTEE-CCSCTTEEEEEEECTTSCEEEEEEESSCCTT
T ss_pred EccccCCCceEecCcceEEcCCCCEEEEEEEecCCCC-EEEEEECCEE-CCCCCCcccccEEecCCCcEEEEEEeecccc
Confidence 3333433333333344567899999999998889999 9999999988 655443221 1 2334567999999999
Q ss_pred CCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCe
Q psy3823 81 EYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGI 160 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~ 160 (365)
|+|.|+|.|.|..|.....+.|.| ..+|.+.. . ....+.+|+.+.|.|.+.+.|.+. +.|++++.
T Consensus 501 d~G~Y~C~a~n~~g~~~~~~~l~V---------~~~p~~~~--~---~~~~v~~G~~v~l~C~~~g~p~~~-i~W~k~~~ 565 (816)
T 3dmk_A 501 DGGLYKCIAKSKVGVAEHSAKLNV---------YGLPYIRQ--M---EKKAIVAGETLIVTCPVAGYPIDS-IVWERDNR 565 (816)
T ss_dssp TCEEEEEEEEETTEEEEEEEEEEE---------CSSCEECC--C---CCEEEETTCCEEEECCEECSSEEE-EEEEETTE
T ss_pred CCEEEEEEEEECCCeEEEEEEEEE---------ecCCeeEc--c---CCeEEecCCeEEEEEEecCCCCCE-EEEEECCe
Confidence 999999999999988888889998 66665421 1 334678999999999999988775 99999999
Q ss_pred EEeeCCCCceEEeeceEEEeeec-CCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecC
Q psy3823 161 TISNNASAGRIITNQTLVLQSVT-RHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRN 239 (365)
Q Consensus 161 ~l~~~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g 239 (365)
.+.... ......+++|.|.++. ..|+|.|+|.+.|..|...+..+.+.+. .+|.+.........+..|
T Consensus 566 ~l~~~~-~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~----------~~p~~~~~~~~~~~~~~G 634 (816)
T 3dmk_A 566 ALPINR-KQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVM----------VLPRIIPFAFEEGPAQVG 634 (816)
T ss_dssp ESCCST-TEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEE----------CCCCCBCCCCCSSCEESS
T ss_pred EcccCC-ceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEe----------cCCccccccccccccCCC
Confidence 886432 2233457789999998 5899999999999988766567778887 777665433333348899
Q ss_pred ceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 240 EQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 240 ~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
+.+.|.|.+.+.+++..+.|+++|..................+.|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 635 ~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 714 (816)
T 3dmk_A 635 QYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVP 714 (816)
T ss_dssp CEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEE
T ss_pred CeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeC
Confidence 99999999987665534999999875432222222233455678999999999999999999999999988888887644
Q ss_pred c
Q psy3823 320 G 320 (365)
Q Consensus 320 ~ 320 (365)
+
T Consensus 715 P 715 (816)
T 3dmk_A 715 P 715 (816)
T ss_dssp E
T ss_pred C
Confidence 4
No 12
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=7.6e-32 Score=262.12 Aligned_cols=267 Identities=21% Similarity=0.302 Sum_probs=205.0
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCe
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G 83 (365)
+.+.+.++|......+....+.+|+.++|.|.+.++|.+ .++|++++.. +... ..|.|.+++.+|.|
T Consensus 373 ~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~i~W~~~g~~-~~~~-----------~~L~i~~~~~~d~G 439 (642)
T 1e07_A 373 VILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPA-QYSWLIDGNI-QQHT-----------QELFISNITEKNSG 439 (642)
T ss_pred EEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCC-eEEEEECCEE-cCCC-----------ceEEEccCChhhCe
Confidence 345566666554444555677899999999998899999 9999999987 5421 26999999999999
Q ss_pred EEEEEEEeCCCCCccc--EEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeE
Q psy3823 84 TLLCWARNEQGNQRTP--CTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGIT 161 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~~~--~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~ 161 (365)
.|+|.|.|..|....+ +.+.|.. . ..+|.+.. . ....+.+|+.+.|.|.+.+ |.+. +.|+++|..
T Consensus 440 ~Y~C~a~n~~g~~~~s~~~~v~v~~--~----~~~p~i~~--~---~~~~v~~g~~v~l~C~~~~-~~~~-i~W~~~g~~ 506 (642)
T 1e07_A 440 LYTCQANNSASGHSRTTVKTITVSA--E----LPKPSISS--N---NSKPVEDKDAVAFTCEPEA-QNTT-YLWWVNGQS 506 (642)
T ss_pred EEEEEEEcCCCCCcccceEEEEEec--c----CCCceEec--C---CceeecCCCeEEEEEECCC-CCcE-EEEEECCEe
Confidence 9999999998876644 5555521 1 12444432 1 2345779999999999984 5555 999999998
Q ss_pred EeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCce
Q psy3823 162 ISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQ 241 (365)
Q Consensus 162 l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~ 241 (365)
+...........+.+|.|.++...|+|.|+|.+.|..|...+..+.|.|. .+|...........+..|+.
T Consensus 507 l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~----------~~p~~~~~~~~~~~v~~g~~ 576 (642)
T 1e07_A 507 LPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVL----------YGPDTPIISPPDSSYLSGAN 576 (642)
T ss_pred CCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEE----------eCCCcceecCCceeEEcCCc
Confidence 87544332333367899999999999999999999999776667889998 55543322222234889999
Q ss_pred EEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 242 VLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 242 ~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
+.|.|.+.|.|++. +.|+++|..... ...|.|.+++.+|+|.|+|.|.|..|..+.++.|.|...
T Consensus 577 ~~l~C~~~g~p~p~-v~W~~~g~~i~~------------~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~v~ 641 (642)
T 1e07_A 577 LNLSCHSASNPSPQ-YSWRINGIPQQH------------TQVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSITVS 641 (642)
T ss_pred EEEEEEeccCCCCe-EEEEECCEECcc------------CceEEECcccccCCeEEEEEEEecccCcceeEEEEEEEc
Confidence 99999999999998 999998864321 135999999999999999999999999999998888654
No 13
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=2e-32 Score=249.90 Aligned_cols=269 Identities=18% Similarity=0.338 Sum_probs=194.2
Q ss_pred ceEEEEecCCcEEEEEEe-CCCCCcceEEEEeCCCcCCCCCCceeEe-cCCeEEEEEEccCCCCCCeEEEEEEEeCCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTV-DANPQAQYFTWAFNNSGTAPRPLTSYSI-QDGSTSVARYTPTSELEYGTLLCWARNEQGNQ 96 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~-~~~p~~~~v~W~~~~~~~l~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~ 96 (365)
.....+.+|+.+.|.|.. .+.|.+ .+.|++++.. +......... .++ .|.|.+++.+|+|.|+|.|.|..+..
T Consensus 109 ~~~~~v~~G~~~~l~C~~~~~~~~~-~~~W~~~~~~-~~~~~~~~~~~~~~---~L~I~~v~~~D~G~Y~C~a~n~~~~~ 183 (384)
T 3kld_A 109 RSTVSVRRGQGMVLLCGPPPHSGEL-SYAWIFNEYP-SYQDNRRFVSQETG---NLYIAKVEKSDVGNYTCVVTNTVTNH 183 (384)
T ss_dssp CCCEEEEETCCEEECCCCCSEESCE-EEEEEETTEE-CCCSSSEEECTTTC---CEEESSCCGGGCEEEEEEEEETTTTE
T ss_pred CCceeEEcCCCeEEecCCCCCCCCe-EEEEEECCCC-CEeeccEEEEcCCC---cEEEeecCHHHCceEEEEEecccccc
Confidence 344678899999999973 345666 9999999987 5433332222 233 69999999999999999999987654
Q ss_pred c---ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeC-CeEEeeCCCCceEE
Q psy3823 97 R---TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHN-GITISNNASAGRII 172 (365)
Q Consensus 97 ~---~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~-~~~l~~~~~~~~~~ 172 (365)
. ....+.+...... ...+|.+.+... ....+.+|+.+.|.|.+.|.|.|. +.|+++ +..+.. ......
T Consensus 184 ~~~~~~~~~~v~~~~~~--~~~~p~~~~~~~---~~~~~~~G~~v~l~C~~~g~P~p~-i~W~k~~~~~~~~--~~~~~~ 255 (384)
T 3kld_A 184 KVLGPPTPLILRNDGVM--GEYEPKIEVQFP---ETVPAEKGTTVKLECFALGNPVPT-ILWRRADGKPIAR--KARRHK 255 (384)
T ss_dssp EEECCCEEEEEEEEEEC--CCEEEEEEEECC---SEEEEETTSCEEEEEEEEEESCCE-EEEEETTCCCCCT--TCEECT
T ss_pred eeeCCceEEEEccCCcc--cccCCceeecCC---CceEecCCCcEEEEEEEeecCCCc-EEEEeCCCccccc--cceecC
Confidence 3 2223333111000 012344444332 234578899999999999999887 999994 444432 111222
Q ss_pred eeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeC
Q psy3823 173 TNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANP 252 (365)
Q Consensus 173 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p 252 (365)
.++.|.|.+++.+|+|.|+|.|.|..|... ....|.|. .+|.+....... .+..|+.+.|.|.+.|.|
T Consensus 256 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~-~~~~l~v~----------~~P~~~~~~~~~-~v~~g~~v~l~C~~~g~P 323 (384)
T 3kld_A 256 SNGILEIPNFQQEDAGSYECVAENSRGKNV-AKGQLTFY----------AQPNWVQIINDI-HVAMEESVFWECKANGRP 323 (384)
T ss_dssp TSCEEEECSCCGGGCEEEEEEEEETTEEEE-EEEEEEEE----------EEEEEEECCCCE-EECTTCCEEEECEEEEES
T ss_pred CCcEEEECCCChhhCEEEEEEEEcCCCeEE-EEEEEEEe----------cCCccccCCCce-EecCCCCEEEEeECCccC
Confidence 356899999999999999999999998655 56678887 667665444333 388999999999999999
Q ss_pred CCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEc
Q psy3823 253 QAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 253 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
.|. +.|+++|..... ..+..+ .++ .|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 324 ~p~-i~W~k~g~~l~~-~~~~~~-~~~---~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 324 KPT-YRWLKNGDPLLT-RDRIQI-EQG---TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp CCE-EEEEETTEECCC-BTTEEE-ETT---EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CCe-EEEEECCEECCC-CccEEE-eCC---EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 998 999999875432 222222 222 599999999999999999999999999999998863
No 14
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=100.00 E-value=5.4e-32 Score=241.76 Aligned_cols=272 Identities=14% Similarity=0.144 Sum_probs=194.7
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCC---------CCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCC
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDA---------NPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELE 81 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~---------~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d 81 (365)
++.|.......+.+.+|+.+.|.|.+.+ +|.+ .++|+|++.. +...... ..++ .|.|.+++.+|
T Consensus 28 ~~~c~~~~~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~-~v~W~k~~~~-~~~~~~~--~~~~---~L~i~~v~~~D 100 (329)
T 3oq3_B 28 NPSCMFGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDN-VVNWEKIGKT-RRPLNRR--VKNG---DLWIANYTSND 100 (329)
T ss_dssp CTTSEEEEEEEEEECTTSCEEECCHHHHCTTTGGGSCCTTC-EEEEEECSSS-CEECSTT--EETT---EEEESSCCGGG
T ss_pred CCCcccCCcceEEEECCCeEEEEccCCCCccccccccCCCC-eeEEEECCCC-ccccCce--eecc---eEEEcCCChHh
Confidence 3455554456778999999999999555 3557 9999999987 5432221 2334 89999999999
Q ss_pred Ce-EEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecC-CCCeeEEEeCC
Q psy3823 82 YG-TLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANP-PYKKLIWTHNG 159 (365)
Q Consensus 82 ~G-~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~~~i~W~~~~ 159 (365)
+| .|+|.|.+..|.......+.|. ..+|.+.... ....+.+|+.+.|.|.+.+.| .+. +.|++++
T Consensus 101 ~Gs~Y~C~a~n~~g~~~~~~~~~v~--------~~~p~~~~~~----~~~~~~~G~~v~L~C~~~g~p~~~~-i~W~k~~ 167 (329)
T 3oq3_B 101 SHRRYLCTVTTKNGDCVQGIVRSHI--------RKPPSCIPET----YELGTHDKYGIDLYCGILYAKHYNN-ITWYKNN 167 (329)
T ss_dssp GGCCEEEEEECTTSCEEEEEEEEEE--------CCCCSCEEEE----EETTSSTTTCEEEECCCCSCCCCCE-EEEEETT
T ss_pred CCCcEEEEEEeCCCceeeEEEEEEE--------cCCCcEeccc----cceEEeCCCcEEEEeccCCCCCCce-EEEEECC
Confidence 99 9999999988765433333442 2344432222 113467899999999999988 566 9999999
Q ss_pred eEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcC--CCCCC---cccEEEEEeeeeecccccCCCC----ceecCc
Q psy3823 160 ITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINS--QGEGG---STPFDLNINKMVNLIFNSIDEP----VCKQSQ 230 (365)
Q Consensus 160 ~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~--~~~~~---s~~~~l~v~~~~~~~~~~~~~p----~~~~~~ 230 (365)
..+.... ......+..|.|.+++.+|+|.|+|.+.|. .|... +..+.|.|. .+| .+. .+
T Consensus 168 ~~l~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~----------~~~~~~~~~~-~~ 235 (329)
T 3oq3_B 168 QELIIDG-TKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVI----------PSQDHRFKLI-LD 235 (329)
T ss_dssp EECCCSS-SSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEE----------CCCCCCEEEE-CC
T ss_pred ccCCCCC-ceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEE----------CCCCCCCcee-cC
Confidence 9885332 233344789999999999999999999987 55432 223667777 444 222 22
Q ss_pred cceeeeecCceEEEEEEEeeeC---CC-ceeEEEeCCCCCCCCCCceeEe--eCC--CEEEEEEcCCCcccCe-EEEEEE
Q psy3823 231 QRIYGALRNEQVLVSCTVDANP---QA-QYFTWAFNNSDTAPRPLTSYSI--QDG--STSVARYTPTSELEYG-TLLCWA 301 (365)
Q Consensus 231 ~~~~~~~~g~~~~l~C~~~~~p---~~-~~~~W~~~~~~~~~~~~~~~~~--~~~--~~s~l~i~~v~~~d~G-~Y~C~a 301 (365)
....+..|+.+.|.|.+.+.| .+ . +.|+++|............. ..+ ..+.|.|.+++.+|+| .|+|.|
T Consensus 236 -~~~~v~~G~~~~l~C~~~g~p~~~~~i~-v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a 313 (329)
T 3oq3_B 236 -PKINVTIGEPANITCTAVSTSLLVDDVL-IDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRG 313 (329)
T ss_dssp -SEEEECTTSCEEEEEEEEETTCCTTCCE-EEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEE
T ss_pred -CeeEEecCCCEEEEEEEEECCCCCCCcE-EEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEE
Confidence 224488999999999999998 55 5 89999987532222221111 112 3567999999999999 999999
Q ss_pred EcCCccceecEEEEE
Q psy3823 302 RNEQGSQRTPCTFHV 316 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v 316 (365)
.|..|..+.++.|.|
T Consensus 314 ~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 314 HNYYFDKTLTTTVVL 328 (329)
T ss_dssp ECSSCEEEEEEEEEE
T ss_pred EecCCceEEEEEEEe
Confidence 999999988888766
No 15
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.1e-32 Score=252.88 Aligned_cols=290 Identities=15% Similarity=0.251 Sum_probs=208.5
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEe-CCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCC-
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTV-DANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELE- 81 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~-~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d- 81 (365)
+.+.+.+.|...........+.+|+.++|.|.+ .+.|.+ .+.|++++...+..........++ .|.|.+++..|
T Consensus 108 ~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~---~l~i~~v~~~d~ 183 (404)
T 3p3y_A 108 IRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSP-VIFWMSSSMEPITQDKRVSQGHNG---DLYFSNVMLQDM 183 (404)
T ss_dssp EEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCC-EEEEECTTSCBCCCCSSEEECTTS---CEEESSCCSGGG
T ss_pred EEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCC-eEEEeCCCccccCCCCcEEEcCCC---cEEEEeeeeccC
Confidence 345566666555444455778999999999996 788888 999999986524443333333445 69999999999
Q ss_pred CeEEEEEEEeCCCCCc---ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeC
Q psy3823 82 YGTLLCWARNEQGNQR---TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHN 158 (365)
Q Consensus 82 ~G~Y~C~a~~~~~~~~---~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~ 158 (365)
+|.|+|.+.+..+... ..+.+.|....... ..+|.+.. +........+.+|+.+.|.|.+.+.|.+. +.|+++
T Consensus 184 ~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~--~~~p~~~~-~~~~~~~~~~~~G~~v~l~C~~~g~p~~~-v~W~~~ 259 (404)
T 3p3y_A 184 QTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVA--ERTPSFMY-PQGTASSQMVLRGMDLLLECIASGVPTPD-IAWYKK 259 (404)
T ss_dssp SSCBEEEEECTTTCCEEECCCBCEEEECCSCCC--CCCCCBSS-SCSSEEEEEEETTSCEEEECCBCCSSCCE-EEEEET
T ss_pred CcceEEEEEeccccceeccCceeEEEeccCCcc--ccCCcccc-ccCCCCCceEecCCCEEEEEEECCCCCCc-EEEEEC
Confidence 5999999998877542 44566663211100 11222111 00000123578999999999999988886 999999
Q ss_pred CeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeec
Q psy3823 159 GITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALR 238 (365)
Q Consensus 159 ~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 238 (365)
|..+..... .....+..|.|.++..+|+|.|+|.+.|..|... ..+.|.|. .+|.+...+.... +..
T Consensus 260 ~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~----------~~p~~~~~~~~~~-v~~ 326 (404)
T 3p3y_A 260 GGDLPSDKA-KFENFNKALRITNVSEEDSGEYFCLASNKMGSIR-HTISVRVK----------AAPYWLDEPKNLI-LAP 326 (404)
T ss_dssp TBCCCTTTE-EEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEE-EEEEEEEE----------EEEEEEECCCCEE-ECT
T ss_pred CEECCCCcc-cccccCceEEEccCCHhHCEEEEEEEEeCCCcEE-EEEEEEEe----------CCCeeeccCCcce-eec
Confidence 988754221 2223367899999999999999999999988644 67888888 6776665444433 889
Q ss_pred CceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 239 NEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 239 g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
|+.+.|.|.+.|.|.+. +.|+++|...............+. .|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 327 g~~~~l~C~~~g~p~p~-v~W~~~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 327 GEDGRLVCRANGNPKPT-VQWMVNGEPLQSAPPNPNREVAGD--TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp TCCEEEECEEEEESCCE-EEEEETTEEGGGSCCCTTEEEETT--EEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCcEEEEEEccccCCCc-eEEEECCEecCCCCCCceEEecCC--EEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 99999999999999998 999998875433222111222222 59999999999999999999999999998888875
No 16
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=100.00 E-value=4.4e-32 Score=240.12 Aligned_cols=283 Identities=11% Similarity=0.114 Sum_probs=191.9
Q ss_pred CceEEEEecCCcEEEEEE-eCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCC
Q psy3823 18 QQRIYGALRNEQVLVSCT-VDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQ 96 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~-~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~ 96 (365)
+.....+.+|+.+.|.|. ..+.|.+ .++|+|++.. +...........+....|.|.+++.+|+|.|+|.+.+..+..
T Consensus 7 ~~~~~~v~eg~~v~l~~~~~~~~p~~-~v~W~k~~~~-i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~ 84 (312)
T 2y23_A 7 KEVVVNVDDDGVISLNFECDKMTPKS-EFSWSKDYVS-TEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIA 84 (312)
T ss_dssp CCCEEEECTTCCEEEEEECSSCCTTC-CEEEEETTEE-CTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCC
T ss_pred cceeEEEecCCeEEEEEEEeCCCCCc-EEEEEECCEE-CCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcE
Confidence 345677899999999999 4567888 9999999998 765555444455556699999999999999999999988744
Q ss_pred cccEEEEEEeccccCC---CCCCCeEEEEcCCccCccceecCCcEEEEEEEE-ecCCCCeeEEEeCCeEEeeCCCCceEE
Q psy3823 97 RTPCTFHVVKAGECEH---PVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQ-ANPPYKKLIWTHNGITISNNASAGRII 172 (365)
Q Consensus 97 ~~~~~l~V~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~i~W~~~~~~l~~~~~~~~~~ 172 (365)
..+.+.|........ ...+|.+...+. ....+.+|+.+.|.|.+. +.|.+. +.|++++..+..........
T Consensus 85 -~s~~l~v~~~~~~~~~~~~~~~p~~~~~~~---~~~~v~~G~~v~l~C~~~~~~p~~~-v~W~~~~~~i~~~~~~~~~~ 159 (312)
T 2y23_A 85 -SSYLIDEEELKRLLALSHEHKFPTVPVKSE---LAVEILEKGQVRFWMQAEKLSGNAK-VNYIFNEKEIFEGPKYKMHI 159 (312)
T ss_dssp -EEEEECHHHHHHHHHHHHHHHSCBCCEEEE---EEEEECSSSCEEEEEEESCCCSSCE-EEEEETTEEECSSSSCEEEE
T ss_pred -EEEEEEEeeeeeeecccccCCCCccccccC---CceEEeeCCCEEEEEEEEeCCCCCE-EEEEECCEECeeCCcEEEEE
Confidence 355555510000000 000343333221 134688999999999999 777666 99999999987643332222
Q ss_pred e----eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeee------c-----ccccCCCCceecCccceeeee
Q psy3823 173 T----NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVN------L-----IFNSIDEPVCKQSQQRIYGAL 237 (365)
Q Consensus 173 ~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~------~-----~~~~~~~p~~~~~~~~~~~~~ 237 (365)
. ..+|.|.+++.+|+|.|+|.+.+.... ....+.+..... + .+....+|.+..... ..+.
T Consensus 160 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~v~ 234 (312)
T 2y23_A 160 DRNTGIIEMFMEKLQDEDEGTYTFQLQDGKAT---NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLS--WEVT 234 (312)
T ss_dssp ETTTTEEEEEESCCCGGGCEEEEEEEESSSCE---EEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEE--EEEE
T ss_pred ccCCCEEEEEEccCCcccCEeEEEEEEeCCce---EEEEEEEcchhhhhhcccccccccchhhccCCceeecce--EEEe
Confidence 1 234999999999999999999754322 222333310000 0 000002244332222 3488
Q ss_pred cCceEEEEEEEeeeCCC-ceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEE
Q psy3823 238 RNEQVLVSCTVDANPQA-QYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHV 316 (365)
Q Consensus 238 ~g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 316 (365)
.|+.+.|.|.+.+.|++ . +.|+++|..... .....+ .+....|.|.+++.+|+|.|+|.|.|..|....++.|.|
T Consensus 235 ~G~~~~l~C~~~~~p~~~~-v~W~~~g~~~~~-~~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 235 GECNVLLKCKVANIKKETH-IVWYKDEREISV-DEKHDF--KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp TTTEEEEEEEEESCCSSCE-EEEEETTEEEEE-ECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECS
T ss_pred CCCEEEEEEEEcCCCCCCE-EEEeeCCEECCC-CCcEEE--ECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEe
Confidence 99999999999999888 6 999998764321 111211 134568999999999999999999999999988887765
No 17
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=100.00 E-value=2.3e-33 Score=249.00 Aligned_cols=277 Identities=17% Similarity=0.219 Sum_probs=196.2
Q ss_pred ceEEEEecCCcEEEEEEeCCCC-CcceEEEEeCCCcCCCCC--Cce-eEecCCeEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP-QAQYFTWAFNNSGTAPRP--LTS-YSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p-~~~~v~W~~~~~~~l~~~--~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
...+.+.+|+.+.|.|.+.+.| .+ .++|+|++.. +... ... ....++ .|.|.+++.+|+|.|+|.|.+..+
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~~~~-~v~W~k~~~~-~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~g 86 (315)
T 1itb_B 12 KIILVSSANEIDVRPCPLNPNEHKG-TITWYKDDSK-TPVSTEQASRIHQHKE---KLWFVPAKVEDSGHYYCVVRNSSY 86 (315)
T ss_dssp CCCCEEETTSCCCCBCCCCSCCCSS-CCCEECTTSC-SCSCCCTTSSSEECSS---BEECTTCCGGGCSCCEECCCSSSC
T ss_pred ceEEEEcCCCcEEEEeeccCcCCCc-eEEEEeCCCc-CccccccCCcEeccCC---eEEECCCChhhCEEEEEEEeCCce
Confidence 3467789999999999977777 66 9999999875 3221 111 122333 799999999999999999998887
Q ss_pred CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEE------EecCCCCeeEEEeCCeEEeeCCCC
Q psy3823 95 NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI------QANPPYKKLIWTHNGITISNNASA 168 (365)
Q Consensus 95 ~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~------~~~p~~~~i~W~~~~~~l~~~~~~ 168 (365)
.....+.+.+. ..+|.+...+.. .....+.+|+++.|.|.+ .+.|.+. +.|++++..+.... .
T Consensus 87 ~~~~~~~v~v~--------~~~p~~~~~~~~-~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~-i~W~k~~~~l~~~~-~ 155 (315)
T 1itb_B 87 CLRIKISAKFV--------ENEPNLCYNAQA-IFKQKLPVAGDGGLVCPYMEFFKNENNELPK-LQWYKDCKPLLLDN-I 155 (315)
T ss_dssp CCCEECCCEEE--------CCCTTSSSCGGG-EEEEEEETTSCEEEECSSCTTTCTTTTCCCC-CEEEETTEECCCCS-S
T ss_pred EEEEEEEEEEe--------CCCCCccccccc-ccceEEecCCCeEEEEecccccccCCCCCCE-EEEEECCEECCCcc-c
Confidence 76655555542 123322111100 012357789999999998 6778777 99999999986532 3
Q ss_pred ceEEeeceEEEeeecCCCCeEEEEEEE-cCCCCCCc--ccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEE
Q psy3823 169 GRIITNQTLVLQSVTRHSGGLYACSAI-NSQGEGGS--TPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVS 245 (365)
Q Consensus 169 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~-~~~~~~~s--~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 245 (365)
.....+..|.|.+++..|+|.|+|.+. |..|...+ ..+.+.+... ....+|.+.........+..|+.+.|.
T Consensus 156 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~-----~~~~~P~~~~~~~~~~~~~~g~~v~l~ 230 (315)
T 1itb_B 156 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEE-----NKPTRPVIVSPANETMEVDLGSQIQLI 230 (315)
T ss_dssp SEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECC-----CCCCCCEECSCCSEEEECCSSSCEEEE
T ss_pred eEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecC-----CCCCCCEEecCCCCcEEEeCCCcEEEE
Confidence 345557899999999999999999999 77775532 2333333200 011456665544433448899999999
Q ss_pred EEEeeeCCCceeEEEeCCCCCCCCCCc----eeEeeC-------CCEEEEEEcCCCccc-CeEEEEEEEcCCccceecEE
Q psy3823 246 CTVDANPQAQYFTWAFNNSDTAPRPLT----SYSIQD-------GSTSVARYTPTSELE-YGTLLCWARNEQGSQRTPCT 313 (365)
Q Consensus 246 C~~~~~p~~~~~~W~~~~~~~~~~~~~----~~~~~~-------~~~s~l~i~~v~~~d-~G~Y~C~a~n~~g~~~~~~~ 313 (365)
|.+.|.|.|. +.|+++|......... ...... ...+.|.|.+++.+| +|.|+|.|.|..|....++.
T Consensus 231 C~~~g~P~p~-i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~ 309 (315)
T 1itb_B 231 CNVTGQLSDI-AYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQ 309 (315)
T ss_dssp EEEEECTTSE-EEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEE
T ss_pred EEEecCCCCe-eEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEE
Confidence 9999999998 9999998754432211 111111 124579999999999 99999999999999998888
Q ss_pred EEEE
Q psy3823 314 FHVV 317 (365)
Q Consensus 314 l~v~ 317 (365)
|.|.
T Consensus 310 l~v~ 313 (315)
T 1itb_B 310 LIYP 313 (315)
T ss_dssp EECC
T ss_pred EEec
Confidence 8764
No 18
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=1e-31 Score=245.18 Aligned_cols=284 Identities=14% Similarity=0.187 Sum_probs=196.2
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEe-CCCcCCCCCCce-eEecCCeEEEEEEccCCCCC------
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAF-NNSGTAPRPLTS-YSIQDGSTSVARYTPTSELE------ 81 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~-~~~~~l~~~~~~-~~~~~~~~~~l~i~~~~~~d------ 81 (365)
.+|.+....+..+.+.+|+.++|.|.+.+.|.+ .++|++ ++.. +...... ....++ .|.|.+++.+|
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p-~v~W~k~~g~~-~~~~~~~~~~~~~~---~L~i~~~~~~d~~~~~d 76 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMP-EIIWIRSDGTA-VGDVPGLRQISSDG---KLVFPPFRAEDYRQEVH 76 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCC-EEEEEETTSCB-CCCBTTTBEECSTT---EEEECCCCGGGCCHHHH
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCC-EEEEEcCCCCc-cccCCCceEEcCCc---eEEecccChhhcccccc
Confidence 466666655556778899999999998888999 999999 6666 5543322 223444 79999999887
Q ss_pred CeEEEEEEEeCCCCC-cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC--CCeeEEEeC
Q psy3823 82 YGTLLCWARNEQGNQ-RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP--YKKLIWTHN 158 (365)
Q Consensus 82 ~G~Y~C~a~~~~~~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~--~~~i~W~~~ 158 (365)
+|.|+|.|.|..+.. ...+.|.+ ..+|.+...+ ....+.+|+.+.|.|.+.+.++ ...+.|+++
T Consensus 77 ~G~Y~C~a~n~~g~~~s~~~~v~v---------~~~p~~~~~~----~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~ 143 (388)
T 2v5m_A 77 AQVYACLARNQFGSIISRDVHVRA---------VVAQYYEADV----NKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTD 143 (388)
T ss_dssp EEEEEEEEEETTEEEECCCEEEEE---------ECCCCCCCBC----CCEEEETTSCEEECCBCCTTTTTTEEEEEEEET
T ss_pred CceEEEEEEccCCeEEecceEEEE---------ccccccccCc----cceeeecCCcEEEEEECcCCCCCCcceEEEEeC
Confidence 999999999988764 36677777 3344433222 3346789999999999987653 245999999
Q ss_pred CeEEeeCC----CCceEEeeceEEEeeecCCCC-eEEEEEEEcCCCCCCc---ccEEEEEeeeeecccccCCCCceecCc
Q psy3823 159 GITISNNA----SAGRIITNQTLVLQSVTRHSG-GLYACSAINSQGEGGS---TPFDLNINKMVNLIFNSIDEPVCKQSQ 230 (365)
Q Consensus 159 ~~~l~~~~----~~~~~~~~~~l~i~~~~~~d~-G~Y~C~~~~~~~~~~s---~~~~l~v~~~~~~~~~~~~~p~~~~~~ 230 (365)
+..+.... .......++.|.|.+++.+|+ |.|+|.+.|..+.... ....|.|..+.. ...|.+....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~-----~~~p~~~~~~ 218 (388)
T 2v5m_A 144 EEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIS-----SSAPRTPALV 218 (388)
T ss_dssp TCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCS-----CEEEECCSSC
T ss_pred CCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCc-----CCCCcCcccc
Confidence 88764321 122333467899999999999 9999999998643221 123455551100 0012111111
Q ss_pred cceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCC----CCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCc
Q psy3823 231 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPR----PLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 306 (365)
Q Consensus 231 ~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~----~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g 306 (365)
.....+..|+.+.|.|.+.+.|.+. +.|++++...... ........+ ..|.|.+++.+|+|.|+|.|.|..|
T Consensus 219 ~~~~~v~~G~~v~l~C~~~g~p~p~-v~W~~~~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~n~~g 294 (388)
T 2v5m_A 219 QKPLELMVAHTISLLCPAQGFPAPS-FRWYKFIEGTTRKQAVVLNDRVKQVS---GTLIIKDAVVEDSGKYLCVVNNSVG 294 (388)
T ss_dssp CCCEEEETTSCEEECCCCEEESCCE-EEEEEECTTSSCEEECCCSSSEEEET---TEEEESSCCGGGCEEEEEEEECSSC
T ss_pred CCceEEeeCCcEEEEEECCCCCCCE-EEEEecCCCCcccccccccCceeccc---CEEEECcCCHHHCeEEEEEEecCCC
Confidence 1222378899999999999999998 9999986532211 011111112 2599999999999999999999999
Q ss_pred cceecEEEEEEcCc
Q psy3823 307 SQRTPCTFHVVKAG 320 (365)
Q Consensus 307 ~~~~~~~l~v~~~~ 320 (365)
..+..+.|.|..++
T Consensus 295 ~~~~~~~l~V~~~p 308 (388)
T 2v5m_A 295 GESVETVLTVTAPL 308 (388)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred ceeEEEEEEEeCCC
Confidence 98888888876543
No 19
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=6e-32 Score=246.32 Aligned_cols=278 Identities=16% Similarity=0.223 Sum_probs=201.3
Q ss_pred ecccCCeEeeCCceEEEEecCCcEEEEEE-eCCCCCcceEEEEeCCCcCCCCCC--ceeEecCCeEEEEEEccCCCCCCe
Q psy3823 7 NSTDEPVCKQSQQRIYGALRNEQVLVSCT-VDANPQAQYFTWAFNNSGTAPRPL--TSYSIQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 7 ~~~~~p~~~~~~~~~~~v~~G~~~~l~C~-~~~~p~~~~v~W~~~~~~~l~~~~--~~~~~~~~~~~~l~i~~~~~~d~G 83 (365)
.+.+.|...........+.+|+.+.|.|. ..+.|.+ .+.|++++.. +.... ....... ...|.|.+++.+|.|
T Consensus 96 ~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~-~i~W~~~~~~-~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G 171 (382)
T 1cs6_A 96 RFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPAL-SYRWLLNEFP-NFIPADGRRFVSQT--TGNLYIAKTEASDLG 171 (382)
T ss_dssp EEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCC-EEEEEESSTT-CBCCCCSSEEECTT--TCCEEESSCCGGGCE
T ss_pred EeeccccccccCCCceEEecCCcEEEEeCCCCCCCCc-EEEEEECCCc-cccccCceEEEecC--ceEEEEEeeCcccCe
Confidence 33343433333445677899999999999 4566888 9999999876 43221 1121111 127999999999999
Q ss_pred EEEEEEEeCCCCCc-----ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeC
Q psy3823 84 TLLCWARNEQGNQR-----TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHN 158 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~-----~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~ 158 (365)
.|+|.+.+..+... ..+.|.+..... ...+|.+..... ....+.+|+.+.|.|.+.+.|.+. +.|+++
T Consensus 172 ~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~---~~~~P~~~~~~~---~~~~~~~G~~v~l~C~~~g~p~~~-i~W~~~ 244 (382)
T 1cs6_A 172 NYSCFATSHIDFITKSVFSKFSQLSLAAEDA---RQYAPSIKAKFP---ADTYALTGQMVTLECFAFGNPVPQ-IKWRKL 244 (382)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCC---CCEEEEEEECCC---SEEEEETTCCEEEECEEEEESCCE-EEEEEC
T ss_pred eEEEEEEEccccccceeEccceeeccchhhc---ccCCCceeccCC---CceEEeCCCeEEEEEEEccCCCCE-EEEEEC
Confidence 99999998775322 345555521100 022455444322 234688999999999999988777 999998
Q ss_pred CeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeec
Q psy3823 159 GITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALR 238 (365)
Q Consensus 159 ~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 238 (365)
+..+.. ........|.|.+++..|+|.|+|.+.|..|... ..+.|.|. .+|.+....... .+..
T Consensus 245 ~~~~~~----~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~----------~~p~~~~~~~~~-~~~~ 308 (382)
T 1cs6_A 245 DGSQTS----KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDT-YQGRIIIH----------AQPDWLDVITDT-EADI 308 (382)
T ss_dssp CSCCSC----CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEE-EEEEEEEE----------EEEEEEECCCCE-EEET
T ss_pred Cccccc----EEecCCcEEEEccCChhhCEEEEEEEEcCCCeEE-EEEEEEEe----------cCCCcccCCCcc-EEcC
Confidence 876542 1223357899999999999999999999988644 66788888 667666544333 3889
Q ss_pred CceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 239 NEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 239 g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
|+.+.|.|.+.|.|.+. +.|+++|...... .+... .++ .|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 309 g~~~~l~C~~~g~p~p~-v~W~~~g~~~~~~-~~~~~-~~~---~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 309 GSDLRWSCVASGKPRPA-VRWLRDGQPLASQ-NRIEV-SGG---ELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp TCCEEEECEEEEESCCE-EEEEETTEECCCC-SSEEE-ETT---EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCeEEEEEEeeeecCCE-EEEEECCEECCCC-ceEEE-ECC---EEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 99999999999999998 9999998754322 22222 222 59999999999999999999999999999999886
No 20
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=5.4e-31 Score=256.14 Aligned_cols=263 Identities=21% Similarity=0.258 Sum_probs=195.4
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCe
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G 83 (365)
+.+.+.+.|......+....+.+|+.++|.|.+.++|.+ .++|++++.. +.. . ..|.|.+++.+|+|
T Consensus 195 ~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~-~i~W~~~g~~-i~~--------~---~~L~i~~~~~~d~G 261 (642)
T 1e07_A 195 VILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPA-QYSWFVNGTF-QQS--------T---QELFIPNITVNNSG 261 (642)
T ss_pred EEEEEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCc-EEEEEECCeE-ccc--------C---CceEEecccccCCe
Confidence 344555555443334445567899999999999899999 9999999987 532 1 26899999999999
Q ss_pred EEEEEEEeCCCCCc--ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeE
Q psy3823 84 TLLCWARNEQGNQR--TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGIT 161 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~ 161 (365)
.|+|.|.|..+... ..+.|.|... ..+|.+.. . ....+..|+.+.|.|.+.+.| +. +.|+++|..
T Consensus 262 ~Y~C~a~n~~g~~~~s~~~~v~v~~~------~~~p~i~~--~---~~~~~~~g~~v~l~C~~~~~p-~~-v~W~~~g~~ 328 (642)
T 1e07_A 262 SYTCQAHNSDTGLNRTTVTTITVYAE------PPKPFITS--N---NSNPVEDEDAVALTCEPEIQN-TT-YLWWVNNQS 328 (642)
T ss_pred EEEEEEEeCCCceEEeeeEEEEEEcc------CCCCEEEc--C---CceeEecCCcEEEEEECCCCC-cc-EEEEECCcc
Confidence 99999999887654 4456666211 12344332 1 223455678899999998875 44 999999988
Q ss_pred EeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCce
Q psy3823 162 ISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQ 241 (365)
Q Consensus 162 l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~ 241 (365)
+...........+..|.|.++..+|+|.|+|.+.|..|...+..+.|.|. .+|...........+..|+.
T Consensus 329 l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~----------~~p~~~~~~~~~~~~~~g~~ 398 (642)
T 1e07_A 329 LPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVL----------YGPDDPTISPSYTYYRPGVN 398 (642)
T ss_pred CCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEE----------cCCCCCeecCCceEecCCCc
Confidence 86543332333467899999999999999999999998766677888888 66654322222233789999
Q ss_pred EEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEE
Q psy3823 242 VLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFH 315 (365)
Q Consensus 242 ~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 315 (365)
+.|.|.+.+.|.+. +.|+++|..... ...|.|.++..+|+|.|+|.|.|..|....+..+.
T Consensus 399 ~~l~C~~~g~p~~~-i~W~~~g~~~~~------------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~ 459 (642)
T 1e07_A 399 LSLSCHAASNPPAQ-YSWLIDGNIQQH------------TQELFISNITEKNSGLYTCQANNSASGHSRTTVKT 459 (642)
T ss_pred EEEEEEcCccCCCe-EEEEECCEEcCC------------CceEEEccCChhhCeEEEEEEEcCCCCCcccceEE
Confidence 99999999999998 999998864311 23499999999999999999999999776554433
No 21
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=4.9e-32 Score=247.27 Aligned_cols=270 Identities=17% Similarity=0.245 Sum_probs=180.4
Q ss_pred ecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCce-eEecCCeEEEEEEccC-CCCCCeEEEEEEEeCCCCCc-ccEE
Q psy3823 25 LRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTS-YSIQDGSTSVARYTPT-SELEYGTLLCWARNEQGNQR-TPCT 101 (365)
Q Consensus 25 ~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~-~~~~~~~~~~l~i~~~-~~~d~G~Y~C~a~~~~~~~~-~~~~ 101 (365)
.+|+.+.|.|.+.++|.+ .++|+|++.. +...... ....++ .|.|.+. +.+|+|.|+|.|.|..|... ....
T Consensus 21 ~eg~~v~L~C~~~g~P~p-~i~W~k~g~~-l~~~~~~~~~~~~g---~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~ 95 (384)
T 3kld_A 21 SEEKKVKLSCEVKGNPKP-HIRWKLNGTD-VDIGMDFRYSVVDG---SLLINNPNKTQDAGTYQCIATNSFGTIVSREAK 95 (384)
T ss_dssp CSCSEEEECCEEEEESCC-EEEEEETTEE-CCC----CEEEETT---EEEEESCCHHHHCEEEEEEEEETTEEEECCCEE
T ss_pred CCCCeEEEEeEecCCCCC-EEEEEECCEE-CcCCCCccEEEECC---EEEEcCCCCcccCEEEEEEEEcCcccEEecceE
Confidence 589999999998899999 9999999998 6543322 222344 4666655 78899999999999888643 4566
Q ss_pred EEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEE-ecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEe
Q psy3823 102 FHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQ-ANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQ 180 (365)
Q Consensus 102 l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~ 180 (365)
|.+.. .+.+..... ....+.+|+.+.|.|... +.+.+. +.|++++.++...........++.|.|.
T Consensus 96 l~v~~---------~~~~~~~~~---~~~~v~~G~~~~l~C~~~~~~~~~~-~~W~~~~~~~~~~~~~~~~~~~~~L~I~ 162 (384)
T 3kld_A 96 LQFAY---------LENFKTRTR---STVSVRRGQGMVLLCGPPPHSGELS-YAWIFNEYPSYQDNRRFVSQETGNLYIA 162 (384)
T ss_dssp EEEEE---------ECCCSCCCC---CCEEEEETCCEEECCCCCSEESCEE-EEEEETTEECCCSSSEEECTTTCCEEES
T ss_pred EEEec---------ccccccCCC---CceeEEcCCCeEEecCCCCCCCCeE-EEEEECCCCCEeeccEEEEcCCCcEEEe
Confidence 66521 111111111 224578899999999765 334444 9999999887532222122235689999
Q ss_pred eecCCCCeEEEEEEEcCCCCCC--cccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeE
Q psy3823 181 SVTRHSGGLYACSAINSQGEGG--STPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFT 258 (365)
Q Consensus 181 ~~~~~d~G~Y~C~~~~~~~~~~--s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~ 258 (365)
++...|+|.|+|.+.|..+... .....+.+..... .....|.+.........+..|+.+.|.|.+.|.|.|. +.
T Consensus 163 ~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~---~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~-i~ 238 (384)
T 3kld_A 163 KVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGV---MGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPT-IL 238 (384)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEE---CCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCE-EE
T ss_pred ecCHHHCceEEEEEecccccceeeCCceEEEEccCCc---ccccCCceeecCCCceEecCCCcEEEEEEEeecCCCc-EE
Confidence 9999999999999999876421 1112222220000 0002233332222334478999999999999999998 99
Q ss_pred EEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCc
Q psy3823 259 WAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 259 W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 320 (365)
|++++...... ..... .....|.|.+++.+|+|.|+|.|.|..|.......|.|..++
T Consensus 239 W~k~~~~~~~~--~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P 296 (384)
T 3kld_A 239 WRRADGKPIAR--KARRH--KSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQP 296 (384)
T ss_dssp EEETTCCCCCT--TCEEC--TTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred EEeCCCccccc--cceec--CCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCC
Confidence 99965422221 11111 122359999999999999999999999998888888776443
No 22
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=2.6e-31 Score=243.06 Aligned_cols=270 Identities=17% Similarity=0.246 Sum_probs=198.4
Q ss_pred ceEEEEecCCcEEEEEE-eCCCCCcceEEEEeCCCcCC--CC----CCceeEecCCeEEEEEEccCCCCCCe---EEEEE
Q psy3823 19 QRIYGALRNEQVLVSCT-VDANPQAQYFTWAFNNSGTA--PR----PLTSYSIQDGSTSVARYTPTSELEYG---TLLCW 88 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~-~~~~p~~~~v~W~~~~~~~l--~~----~~~~~~~~~~~~~~l~i~~~~~~d~G---~Y~C~ 88 (365)
+....+.+|+.+.|.|. ..+.|.+ .++|++++.... .. ........++ .|.|.+++.+|.| .|+|.
T Consensus 107 ~~~~~~~~G~~v~l~C~~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~~~~Y~C~ 182 (395)
T 1bih_A 107 THEKTPIEGRPFQLDCVLPNAYPKP-LITWKKRLSGADPNADVTDFDRRITAGPDG---NLYFTIVTKEDVSDIYKYVCT 182 (395)
T ss_dssp EEEECCBTTEEEEECCCCCEEESCC-EEEEEEEETTSCGGGCCCCCCTTEEECTTS---CEEEEEECGGGCCSSEEEEEE
T ss_pred CcceeeeeCCcEEEEecCCCCCCCC-eEEEEecCCCcCcccccccccccEEEcCCC---cEEEEEEeeccCCCceEEEEE
Confidence 34566789999999999 4788998 999999862101 11 1222223344 6899999999999 99999
Q ss_pred EEeCCCCCcccEEEEEEe-ccccCCC---CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEee
Q psy3823 89 ARNEQGNQRTPCTFHVVK-AGECEHP---VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISN 164 (365)
Q Consensus 89 a~~~~~~~~~~~~l~V~~-~~~~~~~---~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~ 164 (365)
+.+..+............ ......+ ..+|.+ .+ ....+.+|+.+.|.|.+.|.|.+. +.|+++|..+..
T Consensus 183 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~----~~~~~~~G~~v~l~C~~~g~p~~~-i~W~~~g~~~~~ 255 (395)
T 1bih_A 183 AKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VS----KDMMAKAGDVTMIYCMYGSNPMGY-PNYFKNGKDVNG 255 (395)
T ss_dssp EECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--EC----CSEEEETTSCEEEEEEEECSSCCC-CEEEETTEECCC
T ss_pred EEecccceEEEeeeEEecccccccccccCCcCcee--cC----CceEEECCCcEEEEEEeccCCCCe-EEEEECCEEcCC
Confidence 999888765333322211 0000000 012222 11 345688999999999999998887 999999998865
Q ss_pred CCCCceEEe----eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCc
Q psy3823 165 NASAGRIIT----NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNE 240 (365)
Q Consensus 165 ~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~ 240 (365)
......... ...|.|.++..+|+|.|+|.+.|..|...+..+.|.|. .+|.+...+.....+..|+
T Consensus 256 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~----------~~P~~~~~~~~~~~~~~g~ 325 (395)
T 1bih_A 256 NPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVV----------SAPKYEQKPEKVIVVKQGQ 325 (395)
T ss_dssp CTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEE----------EEEEEEECCCSEEEECTTS
T ss_pred CCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEE----------cCCccccCCCcceEecCCC
Confidence 433333222 23799999999999999999999998876558889998 7787765554434488999
Q ss_pred eEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEE
Q psy3823 241 QVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHV 316 (365)
Q Consensus 241 ~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 316 (365)
.+.|.|.+.|.|.+. +.|+++|..... .+... .++ .|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 326 ~~~l~C~~~g~p~p~-v~W~~~g~~~~~--~~~~~-~~~---~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 326 DVTIPCKVTGLPAPN-VVWSHNAKPLSG--GRATV-TDS---GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp CEEEECEEEEESCCC-CEEEETTEECCS--SSEEE-ETT---EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEEEEECcccCCe-eEEEECCEECCC--CceEE-ECC---EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 999999999999998 999999875432 22222 222 6999999999999999999999999998888876
No 23
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=100.00 E-value=5.5e-31 Score=230.57 Aligned_cols=275 Identities=15% Similarity=0.156 Sum_probs=191.1
Q ss_pred CeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEe
Q psy3823 12 PVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARN 91 (365)
Q Consensus 12 p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~ 91 (365)
|......+..+.+.+|+.++|.|.+.+ .+.|++++.. .. ..........|.|.+++.+|+|.|+|.+.+
T Consensus 4 ~p~i~~~~~~~~v~~G~~v~L~C~~~~-----~v~W~~~~~~-~~-----~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 72 (289)
T 3ejj_X 4 APVIEPSGPELVVEPGETVTLRCVSNG-----SVEWDGPISP-YW-----TLDPESPGSTLTTRNATFKNTGTYRCTELE 72 (289)
T ss_dssp CCEEESCSSEEEECTTCCEEEEEECSS-----CCEEECSCSS-SS-----EECCCSSCCEEEESSCCGGGCEEEEEECCC
T ss_pred CcEecCCCceEEECCCCCEEEEEEeCC-----cEEEccCCCc-eE-----EEeccCCccEEEEeeeccccCEEEEEEEec
Confidence 334445566778899999999999765 5999987654 21 111122234899999999999999999998
Q ss_pred CCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe-CCeEEeeCCCCce
Q psy3823 92 EQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH-NGITISNNASAGR 170 (365)
Q Consensus 92 ~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~-~~~~l~~~~~~~~ 170 (365)
..+.....+.|.| ..+|....... ....+.+|+.+.|.|.+.+.+.+..+.|++ ++..+.. .....
T Consensus 73 ~~~~~~~~~~l~V---------~~~~~~~~~~~---~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~-~~~~~ 139 (289)
T 3ejj_X 73 DPMAGSTTIHLYV---------KDPAHSWNLLA---QEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLR-KTVYF 139 (289)
T ss_dssp -----CEEEEEEE---------CCSSCSEEESC---SEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCT-TCCEE
T ss_pred cCCcceeEEEEEE---------eCCCcceeccc---ceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCC-CccEE
Confidence 8887778888988 44444222221 335688999999999999877665599986 5655543 22223
Q ss_pred EEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee
Q psy3823 171 IITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA 250 (365)
Q Consensus 171 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~ 250 (365)
...+..|.|.+++..|+|.|+|.+.+......+..+.|.|... ...+|.+...+.... +..|+.+.|.|.+.+
T Consensus 140 ~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~------~~~~p~i~~~~~~~~-~~~g~~~~l~C~~~~ 212 (289)
T 3ejj_X 140 FSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRV------HPEPPQIKLEPSKLV-RIRGEAAQIVCSATN 212 (289)
T ss_dssp EETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESS------CCCCCEEEEESSSEE-CCSSSCEEEEEEEEE
T ss_pred ECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEEC------CCCCCeEEecCCceE-EEeCCcEEEEEEeCC
Confidence 3446789999999999999999999544333346677887610 013455554443332 678999999999998
Q ss_pred -eCCCceeEEEeCCCCCCCCCCceeEee--CCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 251 -NPQAQYFTWAFNNSDTAPRPLTSYSIQ--DGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 251 -~p~~~~~~W~~~~~~~~~~~~~~~~~~--~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
.|.+. +.|++++...... ....... ....+.|.|.+++.+|+|.|+|.|.|..|..+.++.|.+..+
T Consensus 213 ~~p~~~-i~W~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~ 282 (289)
T 3ejj_X 213 AEVGFN-VILKRGDTKLEIP-LNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVES 282 (289)
T ss_dssp SSSCCE-EEEEETTEECCCC-EEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC--
T ss_pred CCCceE-EEEEECCEEeecc-CCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEec
Confidence 68887 9999987643221 1111101 112457999999999999999999999999999999887654
No 24
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-31 Score=243.82 Aligned_cols=263 Identities=14% Similarity=0.151 Sum_probs=176.1
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRT 98 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~ 98 (365)
+....|.+|+++.|.|.+.+.|.+ .|.|++++.. +..... ....+.....|.|.+++.+|+|.|+|.|.|..+....
T Consensus 55 ~~~v~V~~G~~v~L~C~v~g~P~p-~i~W~~~~~~-l~~~~~-~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~ 131 (423)
T 3qs7_E 55 AAAVEVDVSASITLQVLVDAPGNI-SCLWVFKHSS-LNCQPH-FDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTI 131 (423)
T ss_dssp -CEEEECSSCCEEEEEECSCCSSC-EEEEEETTEE-ECCCCB-C-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEE
T ss_pred cccEEEecCCcEEEEEEEEcCCCC-eEEEEECCCc-cCccce-eccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEE
Confidence 347789999999999998888998 9999999876 543222 1112223347999999999999999999999888778
Q ss_pred cEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCC--CceEEeece
Q psy3823 99 PCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNAS--AGRIITNQT 176 (365)
Q Consensus 99 ~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~--~~~~~~~~~ 176 (365)
.+.|.| ..+|.+... .......|+.+.|.|.+.|+|.|. |.|++++..+..... .........
T Consensus 132 ~~~l~V---------~~~p~~~~~-----~p~~~~~~~~~~L~C~a~G~P~P~-i~W~k~~~~~~~~~~~~~~~~~~~~~ 196 (423)
T 3qs7_E 132 LFTVSI---------RNTLLYTLR-----RPYFRKMENQDALVCISESVPEPI-VEWVLCDSQGESCKEESPAVVKKEEK 196 (423)
T ss_dssp EEEEEE---------C-----CEE-----EEEEEECSSSSCEEEEEEESSCCE-EEEEEC-------------CEEECCS
T ss_pred EEEEEE---------ecCcccccc-----CCcEeccCCceEEEEEEeeecCCe-EEEEECCCCCccccccccccccccce
Confidence 888888 445543221 112345688889999999999988 999998875532110 001111111
Q ss_pred EEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCCc
Q psy3823 177 LVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQ 255 (365)
Q Consensus 177 l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~ 255 (365)
-+...|+|.|+|.|.|..|...+..+.|.|. ..|.... . ...+.+|+.+.|.|.+.+ .|.+.
T Consensus 197 ----~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~----------~~p~~~~--~-~~~v~~G~~v~L~C~~~g~~p~p~ 259 (423)
T 3qs7_E 197 ----VLHELFGTDIRCCARNELGRECTRLFTIDLN----------QTPQTTL--P-QLFLKVGEPLWIRCKAVHVNHGFG 259 (423)
T ss_dssp ----EECCCCSSCEEEEEECSSCEEEEECEEEESS----------SCCCSST--T-EEEEETTSCEEEEEEEEESSSCCC
T ss_pred ----EEecccCeEEEEEEEcCCCCcceeeEEEEEe----------cCCccCC--C-ceEEeCCCeEEEEEEEEcCCCCcE
Confidence 1157899999999999998765455677776 5555422 2 234889999999999998 66787
Q ss_pred eeEEEeCCCCCCCCCCc--eeEee---CCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCc
Q psy3823 256 YFTWAFNNSDTAPRPLT--SYSIQ---DGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 256 ~~~W~~~~~~~~~~~~~--~~~~~---~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 320 (365)
+.|+++|......... ..... ......|.|.+++.+|+|.|+|.|.|. .+..+.|.|..++
T Consensus 260 -i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p 325 (423)
T 3qs7_E 260 -LTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKG 325 (423)
T ss_dssp -EEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSC
T ss_pred -EEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCC
Confidence 9999998754221000 01100 111346999999999999999999998 6667777776543
No 25
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=100.00 E-value=1e-32 Score=248.36 Aligned_cols=280 Identities=14% Similarity=0.219 Sum_probs=167.9
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCC-----------cceEEEEeCCCcCCCC--------CCceeEecCCeEEEEEEccC
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQ-----------AQYFTWAFNNSGTAPR--------PLTSYSIQDGSTSVARYTPT 77 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~-----------~~~v~W~~~~~~~l~~--------~~~~~~~~~~~~~~l~i~~~ 77 (365)
.....+.+.+|+.+.|.|.+.+.|. + .++|++++.. ... ........++ .|.|.++
T Consensus 12 ~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~-~i~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~---~L~i~~~ 86 (349)
T 4dep_C 12 DTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGL-TLIWYWTRQD-RDLEEPINFRLPENRISKEKD---VLWFRPT 86 (349)
T ss_dssp CCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTC-EEEEEEEESS-CCCEEECCCCCGGGCEEEETT---EEEESSC
T ss_pred ceeeeEEEecCCeEEEEccccccccccccccccCCCc-eEEEEECCCC-CcccccccccccCceEeecCC---EEEEccC
Confidence 3455677899999999999877664 7 9999999853 211 1111122333 7999999
Q ss_pred CCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEE-----EecCCCCe
Q psy3823 78 SELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI-----QANPPYKK 152 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~-----~~~p~~~~ 152 (365)
+.+|+|.|+|.|.+..+.....+.|.|..... ...+.+ ..+ ....+.+|+.+.|.|.+ .+.|.+.
T Consensus 87 ~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~----~~~~~~-~~~----~~~~~~~g~~~~l~C~~~~~~~~g~p~~~- 156 (349)
T 4dep_C 87 LLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS----CFNSPM-KLP----VHKLYIEYGIQRITCPNVDGYFPSSVKPT- 156 (349)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEECCCT----TSCCSC-CCC----EEEEETTCSEEEEECCSCTTSSCTTSCCE-
T ss_pred ChhhCEEEEEEEecCCceEEEEEEEEEecCCc----ccCccc-ccC----cceeeecCccEEEEcCCCcccccCCCCce-
Confidence 99999999999999887777778888843211 011110 000 12356789999999975 5667776
Q ss_pred eEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCC-CCC--CcccEEEEEeeeeecccccCCCCceecC
Q psy3823 153 LIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQ-GEG--GSTPFDLNINKMVNLIFNSIDEPVCKQS 229 (365)
Q Consensus 153 i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~~--~s~~~~l~v~~~~~~~~~~~~~p~~~~~ 229 (365)
+.|++++..+... .........|.|.+++.+|+|.|+|.+.|.. |.. .+..+.|.|..+... ..+|.+..+
T Consensus 157 v~W~k~~~~l~~~--~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~----~~~p~i~~~ 230 (349)
T 4dep_C 157 ITWYMGCYKIQNF--NNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKN----AVPPVIHSP 230 (349)
T ss_dssp EEEEETTEECCSC--SSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGG----CCSCEEC--
T ss_pred EEEeeCCEECCCc--cceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCC----CCCCeEecC
Confidence 9999999988542 3344445679999999999999999999986 433 246667777610000 015555444
Q ss_pred ccce-eeeecCceEEEEEEEee----eCCCceeEEEeCCCCCCCCCCceeE------ee-CC--CEEEEEEcCCCcccC-
Q psy3823 230 QQRI-YGALRNEQVLVSCTVDA----NPQAQYFTWAFNNSDTAPRPLTSYS------IQ-DG--STSVARYTPTSELEY- 294 (365)
Q Consensus 230 ~~~~-~~~~~g~~~~l~C~~~~----~p~~~~~~W~~~~~~~~~~~~~~~~------~~-~~--~~s~l~i~~v~~~d~- 294 (365)
.... ..+..|+.+.|.|.+.+ .|.+. +.|+++|............ .. .+ ..+.|.|.++..+|+
T Consensus 231 ~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~-v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~ 309 (349)
T 4dep_C 231 NDHVVYEKEPGEELLIPCTVYFSFLMDSRNE-VWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLK 309 (349)
T ss_dssp --------------CCCEEEEECCCTTCCCE-EEEESSCC--------CCCCEEEECCTTCCEEEEECC-----------
T ss_pred CCceeEEEecCCcEEEEEEEEEccCCCCCCE-EEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcC
Confidence 3222 24789999999999984 57787 9999998754331111111 00 11 234599999999999
Q ss_pred eEEEEEEEcCCccceecEEEEEEc
Q psy3823 295 GTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 295 G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
|.|+|.|.|..|.....+.|.|..
T Consensus 310 G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 310 RSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp --CEEEEECSSCEEEEECC-----
T ss_pred CcEEEEEEcCCCcEEEEEEEeeec
Confidence 999999999999999888888865
No 26
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=2.5e-32 Score=250.53 Aligned_cols=290 Identities=19% Similarity=0.257 Sum_probs=198.7
Q ss_pred cccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEc----cCCCCCCe
Q psy3823 8 STDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYT----PTSELEYG 83 (365)
Q Consensus 8 ~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~----~~~~~d~G 83 (365)
+..+|...........+.+|+.++|.|.+.++|.+ .++|+|++.. +................|.|. +++.+|+|
T Consensus 13 ~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~-~v~W~k~g~~-l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G 90 (404)
T 3p3y_A 13 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAP-SFHWTRNSRF-FNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEG 90 (404)
T ss_dssp CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCC-EEEEEETTEE-CCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCE
T ss_pred ccCCCcccccCCccEEEcCCCCEEEEEEecCCCCC-eEEEEECCEE-eeeecCCcceEecCCceEEEEeccCCCCccCCE
Confidence 44566665544555678899999999999889999 9999999986 543221111111111245554 78889999
Q ss_pred EEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEE-EecCCCCeeEEEeCCeE
Q psy3823 84 TLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI-QANPPYKKLIWTHNGIT 161 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~i~W~~~~~~ 161 (365)
.|+|.|.|..+... ..+.|.| ..+|...... .....+.+|+.+.|.|.+ .+.|.+. +.|++++..
T Consensus 91 ~Y~C~a~n~~g~~~s~~~~l~V---------~~~p~~~~~~---~~~~~v~~G~~v~l~C~~~~~~p~~~-v~W~~~~~~ 157 (404)
T 3p3y_A 91 EYQCFARNKFGTALSNRIRLQV---------SKSPLWPKEN---LDPVVVQEGAPLTLQCNPPPGLPSPV-IFWMSSSME 157 (404)
T ss_dssp EEEEEEECSSCEEEEEEEEEEE---------CCCCCCCCCC---CCCEEEETTSCEEECCCCCCCSSCCE-EEEECTTSC
T ss_pred EEEEEEEcCCCeEeeeeEEEEE---------eccCccccCC---CCCeEEccCCcEEEEeCCCCCCCCCe-EEEeCCCcc
Confidence 99999999887764 6678888 4444322111 123468899999999998 5667665 999998754
Q ss_pred EeeCCCCceEEeeceEEEeeecCCC-CeEEEEEEEcCCCCCC--cccEEEEEeeeeecccccCCCCceecCc--cceeee
Q psy3823 162 ISNNASAGRIITNQTLVLQSVTRHS-GGLYACSAINSQGEGG--STPFDLNINKMVNLIFNSIDEPVCKQSQ--QRIYGA 236 (365)
Q Consensus 162 l~~~~~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~~~--s~~~~l~v~~~~~~~~~~~~~p~~~~~~--~~~~~~ 236 (365)
............++.|.|.++...| +|.|+|.+.|..+... +..+.+.+..... .....|.+..+. .....+
T Consensus 158 ~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~---~~~~~p~~~~~~~~~~~~~~ 234 (404)
T 3p3y_A 158 PITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRG---VAERTPSFMYPQGTASSQMV 234 (404)
T ss_dssp BCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSC---CCCCCCCBSSSCSSEEEEEE
T ss_pred ccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCC---ccccCCccccccCCCCCceE
Confidence 4332332233346789999999999 6999999999877542 2234455541000 000233332221 123347
Q ss_pred ecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEE
Q psy3823 237 LRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHV 316 (365)
Q Consensus 237 ~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 316 (365)
..|+.+.|.|.+.+.|.+. +.|+++|....... ...... ...|.|.+++.+|+|.|+|.|.|..|..+..+.|.|
T Consensus 235 ~~G~~v~l~C~~~g~p~~~-v~W~~~~~~~~~~~--~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 309 (404)
T 3p3y_A 235 LRGMDLLLECIASGVPTPD-IAWYKKGGDLPSDK--AKFENF--NKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRV 309 (404)
T ss_dssp ETTSCEEEECCBCCSSCCE-EEEEETTBCCCTTT--EEEEGG--GTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ecCCCEEEEEEECCCCCCc-EEEEECCEECCCCc--cccccc--CceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEE
Confidence 8999999999999999997 99999987543222 222221 235999999999999999999999999988888888
Q ss_pred EcCc
Q psy3823 317 VKAG 320 (365)
Q Consensus 317 ~~~~ 320 (365)
..++
T Consensus 310 ~~~p 313 (404)
T 3p3y_A 310 KAAP 313 (404)
T ss_dssp EEEE
T ss_pred eCCC
Confidence 7544
No 27
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=100.00 E-value=3.4e-31 Score=234.89 Aligned_cols=271 Identities=16% Similarity=0.224 Sum_probs=189.1
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcc----eEEEEeCCCcCCCC-------------CCceeEe-----cCCeEEEEEEcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQ----YFTWAFNNSGTAPR-------------PLTSYSI-----QDGSTSVARYTP 76 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~----~v~W~~~~~~~l~~-------------~~~~~~~-----~~~~~~~l~i~~ 76 (365)
+..+.+..|++++|.|.+.+.+.+. .++|+|++.. ... ....... ......+|.|.+
T Consensus 7 P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 85 (313)
T 4fqp_A 7 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGES-GSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFG 85 (313)
T ss_dssp CSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSS-SCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECS
T ss_pred CCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCC-cceEEEecCCCceeccCcceEEEeeccCCcccceEEEECc
Confidence 4456678999999999966555441 4899998764 221 0111110 011223699999
Q ss_pred CCCCCCeEEEEEEEeC-CCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEE-ecCCCCeeE
Q psy3823 77 TSELEYGTLLCWARNE-QGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQ-ANPPYKKLI 154 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~-~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~i~ 154 (365)
++.+|+|.|+|.+.+. .+.....+.|.+ ..+|.+...+. ...+..|+.+.+.|.+. +.|.+. +.
T Consensus 86 v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v---------~~~P~~~~~~~----~~~~~~~~~~~~~C~~~~~~P~~~-i~ 151 (313)
T 4fqp_A 86 LRVEDEGNYTCLFVTFPQGSRSVDIWLRV---------LAKPQNTAEVQ----KVQLTGEPVPMARCVSTGGRPPAQ-IT 151 (313)
T ss_dssp CCGGGCEEEEEEEECSSSCEEEEEEEECC---------BBCCEEEEEEC----CBCCCSSCEEEEEEEEEEEBSCCE-EE
T ss_pred CChhhCEEEEEEEeeccCcceeeeeeeee---------ccCCcceeccc----ceEeecCceEEEEEEccCccCCcE-EE
Confidence 9999999999988643 333446666766 56776655442 23566788899999876 566665 99
Q ss_pred EEeCCeEEeeCCC-----CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCC-cccEEEEEeeeeecccccCCCCceec
Q psy3823 155 WTHNGITISNNAS-----AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGG-STPFDLNINKMVNLIFNSIDEPVCKQ 228 (365)
Q Consensus 155 W~~~~~~l~~~~~-----~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-s~~~~l~v~~~~~~~~~~~~~p~~~~ 228 (365)
|++++..+..... .+.....+.|.|.....+|+|.|+|.|.|..+... +..+.|.|. ++|.+..
T Consensus 152 W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~----------~~P~v~~ 221 (313)
T 4fqp_A 152 WHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY----------YPPEVSI 221 (313)
T ss_dssp EEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC----------EEEEEEE
T ss_pred eecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc----------cCCcccc
Confidence 9999877643211 11122234688899999999999999999876543 344556666 6776653
Q ss_pred CccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 229 SQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 229 ~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
.......+..|+.++|.|.+.|.|.|..+.|+++|...... .... +. .|.|.+++.+|+|.|+|.|.|..|..
T Consensus 222 ~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~----~~~~-~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~ 294 (313)
T 4fqp_A 222 SGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPF----AVAQ-GA--QLLIRPVDKPINTTLICNVTNALGAR 294 (313)
T ss_dssp ECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT----EEEE-TT--EEEECCCSSCCEEEEEEEEECSSCEE
T ss_pred ccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCc----eEEe-CC--EEEECcCChhhCEEEEEEEEeCCCcE
Confidence 33232336778999999999999998449999998754221 1122 22 59999999999999999999999999
Q ss_pred eecEEEEEEcCcc
Q psy3823 309 RTPCTFHVVKAGE 321 (365)
Q Consensus 309 ~~~~~l~v~~~~~ 321 (365)
+.++.|.|..++|
T Consensus 295 ~~~~~l~V~~~PP 307 (313)
T 4fqp_A 295 QAELTVQVKEGPP 307 (313)
T ss_dssp EEEEEEEEECCC-
T ss_pred EEEEEEEEEeCCC
Confidence 9999999987654
No 28
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.98 E-value=9.8e-32 Score=244.90 Aligned_cols=282 Identities=19% Similarity=0.218 Sum_probs=193.3
Q ss_pred ccCCeEeeCCceEEE--EecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCce-eEecCCeEEEEEEccCCC-CCCeE
Q psy3823 9 TDEPVCKQSQQRIYG--ALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTS-YSIQDGSTSVARYTPTSE-LEYGT 84 (365)
Q Consensus 9 ~~~p~~~~~~~~~~~--v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~-~~~~~~~~~~l~i~~~~~-~d~G~ 84 (365)
+++|.+......... ..+|+.++|.|.+.++|.+ .++|++++.. +...... ....++ .|.|.++.. +|+|.
T Consensus 2 ~~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~-~v~W~k~g~~-~~~~~~~~~~~~~~---~L~i~~~~~~~D~G~ 76 (382)
T 1cs6_A 2 SYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPA-TYRWKMNGTE-LKMGPDSRYRLVAG---DLVISNPVKAKDAGS 76 (382)
T ss_dssp CEEEEEEECCCCEEEETTCSCCEEEECCEEEEESCC-EEEEEETTEE-CCCSTTSSEEEETT---EEEEESCCHHHHCEE
T ss_pred CCCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCC-EEEEEECCEE-CCcCCCccEEeeCC---eEEEecccccccCEE
Confidence 345655543332221 2689999999998888998 9999999988 6544222 222344 789999986 99999
Q ss_pred EEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEE-ecCCCCeeEEEeCCeEE
Q psy3823 85 LLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQ-ANPPYKKLIWTHNGITI 162 (365)
Q Consensus 85 Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~i~W~~~~~~l 162 (365)
|+|.|.|..|... ..+.|.|. ..|.+.... .....+.+|+.+.|.|.+. +.|.+. +.|++++..+
T Consensus 77 Y~C~a~n~~g~~~s~~~~l~v~---------~~~~~~~~~---~~~~~v~~G~~v~l~C~~~~~~p~~~-i~W~~~~~~~ 143 (382)
T 1cs6_A 77 YQCVATNARGTVVSREASLRFG---------FLQEFSAEE---RDPVKITEGWGVMFTCSPPPHYPALS-YRWLLNEFPN 143 (382)
T ss_dssp EEEEEEETTEEEECCCEEEEEE---------EECCCCSSC---CCCEEEETTSCEEECCCCCSEESCCE-EEEEESSTTC
T ss_pred EEEEEEcCCcEEEecceEEEee---------ccccccccC---CCceEEecCCcEEEEeCCCCCCCCcE-EEEEECCCcc
Confidence 9999999877543 45666662 122111111 1334678999999999865 456655 9999998765
Q ss_pred eeCCCCceEE--eeceEEEeeecCCCCeEEEEEEEcCCCCC----CcccEEEEEeeeeecccccCCCCceecCccceeee
Q psy3823 163 SNNASAGRII--TNQTLVLQSVTRHSGGLYACSAINSQGEG----GSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGA 236 (365)
Q Consensus 163 ~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~----~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~ 236 (365)
.......... .++.|.|.+++..|+|.|+|.+.|..+.. .+..+.|.+.... ....+|.+.........+
T Consensus 144 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~----~~~~~P~~~~~~~~~~~~ 219 (382)
T 1cs6_A 144 FIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAED----ARQYAPSIKAKFPADTYA 219 (382)
T ss_dssp BCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCC----CCCEEEEEEECCCSEEEE
T ss_pred ccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhh----cccCCCceeccCCCceEE
Confidence 4322222222 24689999999999999999999887532 1233455543100 001244444333333448
Q ss_pred ecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEE
Q psy3823 237 LRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHV 316 (365)
Q Consensus 237 ~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 316 (365)
..|+.+.|.|.+.+.|.+. +.|++++..... .. ......|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 220 ~~G~~v~l~C~~~g~p~~~-i~W~~~~~~~~~-----~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 291 (382)
T 1cs6_A 220 LTGQMVTLECFAFGNPVPQ-IKWRKLDGSQTS-----KW--LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIII 291 (382)
T ss_dssp ETTCCEEEECEEEEESCCE-EEEEECCSCCSC-----CC--SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCeEEEEEEEccCCCCE-EEEEECCccccc-----EE--ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEE
Confidence 8999999999999999998 999998764322 11 122345999999999999999999999999888888887
Q ss_pred EcCc
Q psy3823 317 VKAG 320 (365)
Q Consensus 317 ~~~~ 320 (365)
..++
T Consensus 292 ~~~p 295 (382)
T 1cs6_A 292 HAQP 295 (382)
T ss_dssp EEEE
T ss_pred ecCC
Confidence 6443
No 29
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.98 E-value=4.4e-31 Score=231.51 Aligned_cols=271 Identities=15% Similarity=0.190 Sum_probs=192.0
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEE
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 89 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 89 (365)
.+|.+. ..+....+.+|+.++|.|.+.+ .++|++++.. + ......+ ..|.|.+++.+|+|.|+|.+
T Consensus 11 ~~P~i~-~~~~~~~v~~G~~v~l~C~~~~-----~i~W~~~~~~-~----~~~~~~~---~~L~i~~~~~~d~G~Y~C~~ 76 (290)
T 2o26_X 11 SPPSIH-PAQSELIVEAGDTLSLTCIDPD-----FVRWTFKTYF-N----EMVENKK---NEWIQEKAEATRTGTYTCSN 76 (290)
T ss_dssp -CCEES-SCSSEEEEETTSCEEEEEECTT-----EEEEEEECSS-S----CEEEECS---SEEEETTCCGGGCEEEEEEE
T ss_pred CCCEEe-CCCCeEEEcCCCcEEEEECCCC-----cEEEecCCcc-e----eeecCCC---ceEEEeccCHHhCeEEEEEe
Confidence 345443 4566777899999999999765 7999999988 5 1111122 48999999999999999999
Q ss_pred EeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEE-eCCeEEeeCCCC
Q psy3823 90 RNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWT-HNGITISNNASA 168 (365)
Q Consensus 90 ~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~-~~~~~l~~~~~~ 168 (365)
.+ +. ...+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.+ |....+.|+ +||..+... ..
T Consensus 77 ~n--g~-~~~~~l~V---------~~~~~~~~~~----~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~-~~ 138 (290)
T 2o26_X 77 SN--GL-TSSIYVFV---------RDPAKLFLVG----LPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTD-LT 138 (290)
T ss_dssp SS--SC-EEEEEEEE---------ECSSCCBCCC----CCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTT-CE
T ss_pred eC--Cc-cEEEEEEE---------eCCCcccccc----cceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCC-Cc
Confidence 98 33 57778888 3344433221 3346779999999999985 662349995 688776532 11
Q ss_pred ceEEeeceEEEeeecCCCCe-EEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEE
Q psy3823 169 GRIITNQTLVLQSVTRHSGG-LYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCT 247 (365)
Q Consensus 169 ~~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 247 (365)
........|.|.++..+|+| .|+|.+.|..+...+..+.|.|... ...+|.+...+... .+..|+.+.|.|.
T Consensus 139 ~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~------~~~~P~i~~~~~~~-~v~~G~~v~l~C~ 211 (290)
T 2o26_X 139 FVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREA------IKAIPVVSVPETSH-LLKKGDTFTVVCT 211 (290)
T ss_dssp EEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECC------CCSCCEEECSCSBC-CCCTTCCEEEEEE
T ss_pred eeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeC------CCCCCccccCCCcc-eEecCCcEEEEEE
Confidence 12223568999999999999 9999999986654445677777510 01455554443333 4889999999999
Q ss_pred EeeeCCCceeEEEeCCCCC---CCCCCceeEe---eCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 248 VDANPQAQYFTWAFNNSDT---APRPLTSYSI---QDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 248 ~~~~p~~~~~~W~~~~~~~---~~~~~~~~~~---~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
+.+.|.|..+.|++++... .......... .....+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 212 ~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 289 (290)
T 2o26_X 212 IKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEK 289 (290)
T ss_dssp EEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC---
T ss_pred EecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeC
Confidence 9999888459999998752 1111111111 1223467999999999999999999999999988888887654
No 30
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.98 E-value=9.7e-32 Score=237.75 Aligned_cols=270 Identities=14% Similarity=0.159 Sum_probs=185.8
Q ss_pred EEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCC------C-----------ceeE-ecCCeEEEEEEccCCCCCCe
Q psy3823 22 YGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRP------L-----------TSYS-IQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~------~-----------~~~~-~~~~~~~~l~i~~~~~~d~G 83 (365)
+.+.+|++++|.|.+.+.+.+..++|+|++.. .... . +... .......+|.|.+++.+|+|
T Consensus 9 vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 87 (308)
T 4fom_A 9 VTAVWGKNVSLKCLIEVNETITQISWEKIHGK-SSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSG 87 (308)
T ss_dssp CEEETTSCEEECCBCCCSSCEEEEEEEEESSS-CEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCE
T ss_pred eEEEcCCcEEEEEEecCCCCCcEEEEEECCCC-CCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCE
Confidence 56789999999999654333328999997654 2110 0 0000 01112247999999999999
Q ss_pred EEEEEEEeCCC-CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEE-ecCCCCeeEEEeCCeE
Q psy3823 84 TLLCWARNEQG-NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQ-ANPPYKKLIWTHNGIT 161 (365)
Q Consensus 84 ~Y~C~a~~~~~-~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~i~W~~~~~~ 161 (365)
.|+|.|.+... .....+.+.+ ...|.+...... .......|+.+.|.|.+. |.|.+. +.|++++..
T Consensus 88 ~Y~C~a~n~~~~~~~~~~~~~v---------~~~~~~~~~~~~--~~~~~~~~~~~~l~C~~~~g~P~~~-i~W~~~~~~ 155 (308)
T 4fom_A 88 KYICKAVTFPLGNAQSSTTVTV---------LVEPTVSLIKGP--DSLIDGGNETVAAICIAATGKPVAH-IDWEGDLGE 155 (308)
T ss_dssp EEEEEEEETTTEEEEEEEEEEE---------EBCCEEEEEECS--SCCCTTCSCEEEEEEEEEEEBSCCE-EEECCCSSB
T ss_pred EEEEEEeeCCCcceeeeeEEEe---------eecccccccccc--ceeEEcCCceEEEEEEecCCcCCce-EEEEECCcc
Confidence 99999988643 3446666666 334443332222 223456689999999765 777776 999999887
Q ss_pred EeeCC---CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCC-cccEEEEEeeeeecccccCCCCceecCccceeeee
Q psy3823 162 ISNNA---SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGG-STPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGAL 237 (365)
Q Consensus 162 l~~~~---~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~ 237 (365)
+.... ..........|.|..+..+|+|.|+|.+.|..+... +..+.|.|. .+|.+.........+.
T Consensus 156 ~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~----------~~P~~~~~~~~~~~~~ 225 (308)
T 4fom_A 156 MESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQ----------YAPEVSVTGYDGNWFV 225 (308)
T ss_dssp CCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCC----------EEEEECCBCCCSCEET
T ss_pred cccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEe----------cCCeeEEcccceeeee
Confidence 64321 111222345799999999999999999999877543 344555666 5666554333333367
Q ss_pred cCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 238 RNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 238 ~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
.|+.+.|.|.+.|.|+|..+.|++++...... ... . ....|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 226 ~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~----~~~-~-~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~ 299 (308)
T 4fom_A 226 GRKGVNLKCNADANPPPFKSVWSRLDGQWPDG----LLA-S-DNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYIS 299 (308)
T ss_dssp TCCSCEEECCEEEESCEEEEECCBSSSCCCSS----CBC-S-TTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEE
T ss_pred ccccEEEEEEEecCCCCcEEEEEECCeECCCc----EEE-c-CCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 78999999999999988449999988644221 111 1 22347788999999999999999999999999999887
Q ss_pred cCc
Q psy3823 318 KAG 320 (365)
Q Consensus 318 ~~~ 320 (365)
.++
T Consensus 300 ~~P 302 (308)
T 4fom_A 300 DPP 302 (308)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 31
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.98 E-value=4.6e-33 Score=249.03 Aligned_cols=287 Identities=18% Similarity=0.236 Sum_probs=134.0
Q ss_pred CceEEEEecCCcEEEEEEeCCC-CCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCC
Q psy3823 18 QQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQ 96 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~-p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~ 96 (365)
.+....+.+|+.++|.|.+.+. |.+ .++|++++.. +........ . ...|.|.+++.+|+|.|+|.+.+. +..
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~-~v~W~k~g~~-~~~~~~~~~-~---~~~L~i~~v~~~D~G~Y~C~a~n~-~~~ 86 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMG-PTVWVKDGTG-LVPSERVLV-G---PQRLQVLNASHEDSGAYSCRQRLT-QRV 86 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCc-ceEEEECCee-CCCcccEEe-c---cceEEEeecccccCEEEEEEEEeC-CeE
Confidence 4667778999999999997665 567 9999999987 654333221 2 248999999999999999999988 666
Q ss_pred cccEEEEEEeccccCC-------------CCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEe
Q psy3823 97 RTPCTFHVVKAGECEH-------------PVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITIS 163 (365)
Q Consensus 97 ~~~~~l~V~~~~~~~~-------------~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~ 163 (365)
...+.|.|...-.... ...+|.+............+.+|+.+.|.|.+.|.|.+. +.|++++..+.
T Consensus 87 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~-v~W~~~~~~~~ 165 (334)
T 1ry7_B 87 LCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPS-ISWLKNGREFR 165 (334)
T ss_dssp --------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCE-EECCBTTBCCC
T ss_pred EEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCe-EEEEECCEECc
Confidence 6777777732100000 000122110000000123577899999999999988776 99999998876
Q ss_pred eCCCCc---eEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCc
Q psy3823 164 NNASAG---RIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNE 240 (365)
Q Consensus 164 ~~~~~~---~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~ 240 (365)
...... ......+|.|.+++..|+|.|+|.+.|..|... ..+.|.|... ....|.+.........+..|+
T Consensus 166 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~------~~~~p~~~~~~~~~~~~~~G~ 238 (334)
T 1ry7_B 166 GEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIR-QTYTLDVLER------SPHRPILQAGLPANQTAVLGS 238 (334)
T ss_dssp TTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEE-EEEEEEEECC------CCSSCBCCTTCSCCEEEESSC
T ss_pred ccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEE-EEEEEEEecC------CCCCCceEecCCCceEEeCCC
Confidence 433221 112256899999999999999999999987644 5677777710 001233332222333488999
Q ss_pred eEEEEEEEeeeCCCceeEEEe----CCCCCCCCCCce-eEee-------CCCEEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 241 QVLVSCTVDANPQAQYFTWAF----NNSDTAPRPLTS-YSIQ-------DGSTSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 241 ~~~l~C~~~~~p~~~~~~W~~----~~~~~~~~~~~~-~~~~-------~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
.+.|.|.+.+.|.+. +.|++ +|.......... .... ++..+.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 239 ~v~l~C~~~g~p~p~-v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 317 (334)
T 1ry7_B 239 DVEFHCKVYSDAQPH-IQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFS 317 (334)
T ss_dssp CEEECCCCBCSSCEE-EEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCE
T ss_pred CEEEEEEEecCCCCe-EEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeE
Confidence 999999999999997 99999 554332211111 1111 2223469999999999999999999999999
Q ss_pred eecEEEEEEcCc
Q psy3823 309 RTPCTFHVVKAG 320 (365)
Q Consensus 309 ~~~~~l~v~~~~ 320 (365)
..++.|.|...+
T Consensus 318 ~~~~~l~V~~~~ 329 (334)
T 1ry7_B 318 HHSAWLVVLPAE 329 (334)
T ss_dssp EEEEEEEEECSC
T ss_pred EEEEEEEEEECC
Confidence 999999998664
No 32
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.98 E-value=4.7e-31 Score=250.51 Aligned_cols=279 Identities=19% Similarity=0.266 Sum_probs=193.8
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCce--eEe---cCCeEEEEEEccCCCCCCeE
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTS--YSI---QDGSTSVARYTPTSELEYGT 84 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~--~~~---~~~~~~~l~i~~~~~~d~G~ 84 (365)
.+|.+. ..+....+.+|+.++|.|.+.+.|.+..++|++++.. +...... ... .......|.|.+++.+|+|.
T Consensus 210 ~~p~i~-~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 287 (524)
T 2ec8_A 210 AVPVVS-VSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQ-TKLQEKYNSWHHGDFNYERQATLTISSARVNDSGV 287 (524)
T ss_dssp SCCEEE-CSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCS-CCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEE
T ss_pred CCCcEE-ecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCC-CccccccccccccCCccceEEEEEECCCCHHHCEE
Confidence 445443 3444457899999999999778888834999999987 4211111 111 12345689999999999999
Q ss_pred EEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEee
Q psy3823 85 LLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISN 164 (365)
Q Consensus 85 Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~ 164 (365)
|+|.|.|..|.....+.|.| ..+|.+...+.. .....+.+|+.+.|.|.+.|.|.+..+.|+++|..+..
T Consensus 288 Y~C~a~n~~g~~~~~~~l~V---------~~~p~~~~~~~~-~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~ 357 (524)
T 2ec8_A 288 FMCYANNTFGSANVTTTLEV---------VDKGFINIFPMI-NTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTD 357 (524)
T ss_dssp EEEEEECSSCEEEEEEEEEE---------ESSCEEEEEESS-CSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSS
T ss_pred EEEEEEecCCceEEEEEEEE---------eccCceEeecCC-CceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccC
Confidence 99999999888878899999 677877665532 13457889999999999999888777999999988765
Q ss_pred CCCCceEE-------eeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeee
Q psy3823 165 NASAGRII-------TNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGAL 237 (365)
Q Consensus 165 ~~~~~~~~-------~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~ 237 (365)
........ ...+|.|.++..+|+|.|+|.|.|..|... ..+.|.|. .+|.+..... ..
T Consensus 358 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~----------~~P~i~~~~~----~~ 422 (524)
T 2ec8_A 358 KWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAA-IAFNVYVN----------TKPEILTYDR----LV 422 (524)
T ss_dssp SBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEE-EEEEEEEC----------EEEEEEEEEC----CS
T ss_pred CccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEE-EEEEEEEe----------cCCeEeeccc----Cc
Confidence 43211111 245899999999999999999999998754 67888888 7777654332 33
Q ss_pred cCceEEEEEEEeeeCCCceeEEEeCCCCCCC-------CCCc---eeEeeCCCEEE-EEEcCCCcccCeEEEEEEEcCCc
Q psy3823 238 RNEQVLVSCTVDANPQAQYFTWAFNNSDTAP-------RPLT---SYSIQDGSTSV-ARYTPTSELEYGTLLCWARNEQG 306 (365)
Q Consensus 238 ~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~-------~~~~---~~~~~~~~~s~-l~i~~v~~~d~G~Y~C~a~n~~g 306 (365)
.| .|.|.+.|.|.|. +.|++++..... .... .....++.... ..+.....+|+|.|+|.|.|..|
T Consensus 423 ~g---~l~C~~~g~P~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G 498 (524)
T 2ec8_A 423 NG---MLQCVAAGFPEPT-IDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVG 498 (524)
T ss_dssp SS---CEEEEEEEESCCE-EECCCC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSC
T ss_pred Cc---EEEEEEEeecCCE-EEEEECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCC
Confidence 45 9999999999998 999998754311 0011 11122333222 22444446999999999999999
Q ss_pred cceecEEEEEEcC
Q psy3823 307 SQRTPCTFHVVKA 319 (365)
Q Consensus 307 ~~~~~~~l~v~~~ 319 (365)
..+..+.|.|...
T Consensus 499 ~~~~~~~l~V~e~ 511 (524)
T 2ec8_A 499 KTSAYFNFAFKGN 511 (524)
T ss_dssp EEECCCCCCC---
T ss_pred ceEEEEEEEEecC
Confidence 9999998888754
No 33
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.98 E-value=6.9e-31 Score=248.41 Aligned_cols=268 Identities=15% Similarity=0.165 Sum_probs=186.4
Q ss_pred EeecccCCeEeeCCceEEEEecCCcEEEEEEeC-CCCCcceEEEEeCCCcCCCCCCcee---EecC---CeEEEEEEccC
Q psy3823 5 IFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVD-ANPQAQYFTWAFNNSGTAPRPLTSY---SIQD---GSTSVARYTPT 77 (365)
Q Consensus 5 ~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~~v~W~~~~~~~l~~~~~~~---~~~~---~~~~~l~i~~~ 77 (365)
.+.+.+.|.. .+....+.+|+.+.|.|.+. +.|.+ .++|++++.. +....... ...+ .....|.|.++
T Consensus 223 ~l~V~~~p~~---~p~~~~v~~G~~v~L~C~~~~g~p~p-~i~W~k~g~~-l~~~~~~~~~~~~~~~~~~~~~~L~I~~v 297 (527)
T 3qs9_E 223 TIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGF-GLTWELENKA-LEEGNYFEMSTYSTNRTMIRILFAFVSSV 297 (527)
T ss_dssp EEESSSCCCC---SCCEEEECTTSCEEEEEEEEESSSCC-CEEEECSSSC-CCGGGEEEEEEEETTTEEEEEEEEEESSC
T ss_pred EEEEeccCcc---CCCceEEeCCCeEEEEEEEccCCCCe-EEEEEECCEE-CCCCceeeeeeeccCcceeeEEEEEEccC
Confidence 4555565554 34467788999999999974 88999 9999999987 65432211 1111 13346999999
Q ss_pred CCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe
Q psy3823 78 SELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH 157 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~ 157 (365)
+.+|+|.|+|.|.|. ....+.|.| ..+|.+.+.+.. ....+.+|+.+.|.|.+.|+|.|. +.|++
T Consensus 298 ~~~DsG~Y~C~a~N~---~~~~~~L~V---------~~~p~i~~~~~~--~~~~v~~G~~v~L~C~~~g~P~p~-i~W~k 362 (527)
T 3qs9_E 298 ARNDTGYYTCSSSKH---PSQSALVTI---------VEKGFINATNSS--EDYEIDQYEEFCFSVRFKAYPQIR-CTWTF 362 (527)
T ss_dssp CGGGCEEEEEEETTE---EEEEEEEEE---------C--CEEECCCSC--CEECCCTTCCCCEEEEEEEESCCE-EEEEE
T ss_pred CcccCeEEEEEEEeC---CCceEEEEE---------EccCccccccCc--ccEEEcCCCeEEEEEEEEecCCCE-EEEEE
Confidence 999999999999987 457788888 667765544332 235678899999999999999987 99999
Q ss_pred CCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeee
Q psy3823 158 NGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGAL 237 (365)
Q Consensus 158 ~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~ 237 (365)
+|..+..... ......+|.|.+++.+|+|.|+|.|.|..|... ..+.|.|. .+|.+.....
T Consensus 363 ~g~~l~~~~~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~-~~~~L~V~----------~~P~i~~~~~------ 423 (527)
T 3qs9_E 363 SRKSFPCEQK--GLDNGYSISKFCNHKHQPGEYIFHAENDDAQFT-KMFTLNIR----------RKPQVLAEAS------ 423 (527)
T ss_dssp TTEEEECBCC--BCSSSSEEEEECCCTTCCSCEEEEEEETTEEEE-EEEEEC------------CCCEEEECCC------
T ss_pred CCEECcCCcc--cccCCcEEEEecCCcccCEEEEEEEEeCCCcEE-EEEEEEEe----------cCCeEEEeCC------
Confidence 9999975433 122456899999999999999999999998765 56888888 8887754321
Q ss_pred cCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCc------------eeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCC
Q psy3823 238 RNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLT------------SYSIQDGSTSVARYTPTSELEYGTLLCWARNEQ 305 (365)
Q Consensus 238 ~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~------------~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~ 305 (365)
| ..|.|.+.|.|.|. +.|++++......... .........+.|.|.. .+|+|.|+|.|.|..
T Consensus 424 -~--~~l~C~a~g~P~p~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~--~~d~G~Y~C~A~N~~ 497 (527)
T 3qs9_E 424 -A--SQASCFSDGYPLPS-WTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSE--AIKGFLVKCCAYNSL 497 (527)
T ss_dssp -C--E---EEEECSSCCE-EEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCC--SSCSCEEEEEEECSS
T ss_pred -C--CEEEEEEEEEcCCe-EEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEE--cCCCEEEEEEEEeCC
Confidence 2 35799999999998 9999876532111100 0001111223344443 569999999999999
Q ss_pred ccceecEEEEEE
Q psy3823 306 GSQRTPCTFHVV 317 (365)
Q Consensus 306 g~~~~~~~l~v~ 317 (365)
|..+..+.|.|.
T Consensus 498 G~~~~~~~L~V~ 509 (527)
T 3qs9_E 498 GTSCETILLNSP 509 (527)
T ss_dssp CEEEEEEEC---
T ss_pred CCceeEEEEecC
Confidence 999988888664
No 34
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.97 E-value=1.7e-29 Score=230.62 Aligned_cols=301 Identities=15% Similarity=0.155 Sum_probs=210.1
Q ss_pred eEEEEecCCcEEEEEEeCCCCCcceEEEEeC--CCcCCCCC-----CceeEecCCeEEEEEEccCCCCCCeEEEEEEEeC
Q psy3823 20 RIYGALRNEQVLVSCTVDANPQAQYFTWAFN--NSGTAPRP-----LTSYSIQDGSTSVARYTPTSELEYGTLLCWARNE 92 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~--~~~~l~~~-----~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~ 92 (365)
....+.+|+.++|.|.+.+.|.+ .++|+|+ +.. +... .............|.|.+++.+|+|.|+|.|.|.
T Consensus 8 ~~~~~~~G~~v~l~C~~~g~p~p-~v~W~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 85 (389)
T 2jll_A 8 KNETTYENGQVTLVCDAEGEPIP-EITWKRAVDGFT-FTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASR 85 (389)
T ss_dssp CCEEEETTSEEEEEEEEECSSCC-EEEEEETTTTEE-ECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECS
T ss_pred CceEEeCCCeEEEEEEeecccCC-eEEEEeCCCCce-eccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeC
Confidence 34567889999999998899999 9999999 665 4431 2222233345568999999999999999999999
Q ss_pred CCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEE
Q psy3823 93 QGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRII 172 (365)
Q Consensus 93 ~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~ 172 (365)
.|.....+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.|.|.+. +.|+++|..+..........
T Consensus 86 ~g~~~~~~~l~V---------~~~P~~~~~~----~~~~~~~g~~~~l~C~~~g~p~~~-i~W~~~g~~l~~~~~~~~~~ 151 (389)
T 2jll_A 86 IGGHQKSMYLDI---------EYAPKFISNQ----TIYYSWEGNPINISCDVKSNPPAS-IHWRRDKLVLPAKNTTNLKT 151 (389)
T ss_dssp SCEEEEEEEEEE---------EEEEEECCSC----CEEEECTTCCEEEEECEEEESCCE-EEEEETTEESSCTTCTTEEE
T ss_pred CCCcceEEEEEE---------EeCCEEecCc----ceEEeccCCEEEEEEEEEecCCCe-EEEEECCccCCcccCceEEE
Confidence 988888888988 5566543211 223467899999999999998876 99999999887644323222
Q ss_pred e----eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEE
Q psy3823 173 T----NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTV 248 (365)
Q Consensus 173 ~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 248 (365)
. ...|.|.++...|+|.|+|.|.|..|... ..+.+.+. ..|..... .... ...+..+.|.|..
T Consensus 152 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~-~~~~l~v~----------~~P~~P~~-~~~~-~~~~~~~~l~w~~ 218 (389)
T 2jll_A 152 YSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRF-QEYILALA----------DVPSSPYG-VKII-ELSQTTAKVSFNK 218 (389)
T ss_dssp EECSSCEEEEECCCSTTSSEEEEEEEEETTEEEE-EEEEEEEC----------CCCCCCEE-EEEE-EECSSCEEEEEEC
T ss_pred eccCCEEEEEECCCChhhCEEEEEEEEcCCCcEE-EEEEEEec----------CCCCCCcc-eEEe-eccCCEEEEEEeC
Confidence 2 34799999999999999999999998754 45566665 44431111 1111 2345778999975
Q ss_pred eee----CCCc-eeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEc-----
Q psy3823 249 DAN----PQAQ-YFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVK----- 318 (365)
Q Consensus 249 ~~~----p~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~----- 318 (365)
... |... .+.|..++... .......+....+.|.++...+.|.|+|.|.|..|....+..+.+..
T Consensus 219 p~~~~g~pi~~y~v~~~~~~~~~-----~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~ 293 (389)
T 2jll_A 219 PDSHGGVPIHHYQVDVKEVASEI-----WKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVRE 293 (389)
T ss_dssp CSCCTTSCEEEEEEEEEETTCSC-----CEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCC
T ss_pred CCCCCCcceEEEEEEEEECCCcc-----cEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCC
Confidence 321 2111 46787765421 11222333445689999999999999999999998754333333221
Q ss_pred Ccc------------------------------------------------------ccc-cCccccEEEEEEEEEcCCC
Q psy3823 319 AGE------------------------------------------------------CEH-PVAVSHRYVAKLYATNAKG 343 (365)
Q Consensus 319 ~~~------------------------------------------------------c~~-~l~~~~~~~~~~~~~n~~g 343 (365)
+.+ +.+ +|.|+..|.|+|.|.|..|
T Consensus 294 p~~p~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G 373 (389)
T 2jll_A 294 PSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLG 373 (389)
T ss_dssp CCCCCEEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CC
T ss_pred CCCCccccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCc
Confidence 111 000 7999999999999999999
Q ss_pred CCceeeeeece
Q psy3823 344 AGPMVLMKTNT 354 (365)
Q Consensus 344 ~s~~~~~~~~~ 354 (365)
.|++..+...|
T Consensus 374 ~s~~s~~~~~T 384 (389)
T 2jll_A 374 YSEPTVYEFSM 384 (389)
T ss_dssp BCCCEEEEEEC
T ss_pred CCCceeeEecC
Confidence 99987764444
No 35
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.97 E-value=7.8e-31 Score=239.38 Aligned_cols=274 Identities=14% Similarity=0.187 Sum_probs=192.5
Q ss_pred EeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCC---cceEEEEeCCCcCCCCC-----CceeEecCCeEEEEEEcc
Q psy3823 5 IFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ---AQYFTWAFNNSGTAPRP-----LTSYSIQDGSTSVARYTP 76 (365)
Q Consensus 5 ~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~---~~~v~W~~~~~~~l~~~-----~~~~~~~~~~~~~l~i~~ 76 (365)
.+.+.+.|..... .....+.+|+.++|.|.+.+.+. + .++|++++.. +... .......++ .|.|.+
T Consensus 97 ~v~v~~~p~~~~~-~~~~~v~~G~~v~l~C~~~~~~~~~~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~---~L~i~~ 170 (388)
T 2v5m_A 97 HVRAVVAQYYEAD-VNKEHVIRGNSAVIKCLIPSFVADFVE-VVSWHTDEEE-NYFPGAEYDGKYLVLPSG---ELHIRE 170 (388)
T ss_dssp EEEEECCCCCCCB-CCCEEEETTSCEEECCBCCTTTTTTEE-EEEEEETTCC-EECSSSCBTTTEEECTTS---CEEESS
T ss_pred EEEEccccccccC-ccceeeecCCcEEEEEECcCCCCCCcc-eEEEEeCCCc-ccccccCCCCcEEEccCC---cEEEec
Confidence 3444455544332 33456789999999999766543 5 9999999876 4321 121222334 799999
Q ss_pred CCCCCC-eEEEEEEEeCCCCCc----ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCC
Q psy3823 77 TSELEY-GTLLCWARNEQGNQR----TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYK 151 (365)
Q Consensus 77 ~~~~d~-G~Y~C~a~~~~~~~~----~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 151 (365)
++.+|. |.|+|.+.+..+... ....|.|..... ...|.+ +........+.+|+.+.|.|.+.|+|.+.
T Consensus 171 v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~----~~~p~~---~~~~~~~~~v~~G~~v~l~C~~~g~p~p~ 243 (388)
T 2v5m_A 171 VGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIS----SSAPRT---PALVQKPLELMVAHTISLLCPAQGFPAPS 243 (388)
T ss_dssp CCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCS----CEEEEC---CSSCCCCEEEETTSCEEECCCCEEESCCE
T ss_pred CCccccCeeEEEEeccCCCCceeeccccceEEEecCCc----CCCCcC---ccccCCceEEeeCCcEEEEEECCCCCCCE
Confidence 999999 999999998764332 223455521100 001110 00001223577899999999999988887
Q ss_pred eeEEEeCCeEEe----eCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCcee
Q psy3823 152 KLIWTHNGITIS----NNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCK 227 (365)
Q Consensus 152 ~i~W~~~~~~l~----~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~ 227 (365)
+.|++++..+. .....+....+..|.|.++...|+|.|+|.+.|..|... ..+.|.|. .+|.+.
T Consensus 244 -v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~----------~~p~~~ 311 (388)
T 2v5m_A 244 -FRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGES-VETVLTVT----------APLSAK 311 (388)
T ss_dssp -EEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEE-EEEEEEEE----------EEEEEE
T ss_pred -EEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCcee-EEEEEEEe----------CCCccc
Confidence 99999743221 111223344567999999999999999999999998654 67788888 555554
Q ss_pred cCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 228 QSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 228 ~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
..+.. ..+..|+.+.|.|.+.|.|.+. +.|+++|..... ..+.|.|.++..+|+|.|+|.|.|..|.
T Consensus 312 ~~~~~-~~v~~g~~~~l~C~~~g~p~p~-i~W~~~g~~i~~-----------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 378 (388)
T 2v5m_A 312 IDPPT-QTVDFGRPAVFTCQYTGNPIKT-VSWMKDGKAIGH-----------SESVLRIESVKKEDKGMYQCFVRNDRES 378 (388)
T ss_dssp EESSE-EEECTTSCEEEEEEEEEECCCE-EEEEETTEECSC-----------CSSEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred cCCCc-EEecCCCCEEEEEEeccccCCe-EEEEECCEECcc-----------CCCEEEEecCChhhCEEEEEEEEcCCCc
Confidence 33333 3388999999999999999998 999998864321 1236999999999999999999999999
Q ss_pred ceecEEEEE
Q psy3823 308 QRTPCTFHV 316 (365)
Q Consensus 308 ~~~~~~l~v 316 (365)
.+.++.|.|
T Consensus 379 ~~~~~~l~V 387 (388)
T 2v5m_A 379 AEASAELKL 387 (388)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 998888876
No 36
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.97 E-value=1.2e-30 Score=238.60 Aligned_cols=290 Identities=16% Similarity=0.187 Sum_probs=192.1
Q ss_pred cccCCeEeeCCceEEEEecCCcEEEEEEeCC-CCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEE
Q psy3823 8 STDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLL 86 (365)
Q Consensus 8 ~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~-~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 86 (365)
+..+|.+.. ++....+.+|+.++|.|.+.+ .|.+ .++|+|++.. +.......... ....+|.|.+++.+|+|.|+
T Consensus 3 v~~~P~~~~-~p~~~~v~~G~~v~l~C~~~~~~p~~-~v~W~k~g~~-~~~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~ 78 (395)
T 1bih_A 3 VDKYPVLKD-QPAEVLFRENNPTVLECIIEGNDQGV-KYSWKKDGKS-YNWQEHNAALR-KDEGSLVFLRPQASDEGHYQ 78 (395)
T ss_dssp --CCCEECC-CCSEEEEETTSCEEECCCEESCCSSC-EEEEEESSSB-CCTTTTTEEEC-TTSCCEEESSCCGGGCEEEE
T ss_pred cCCCCEeec-CCCceEEeCCCEEEEEEEEecCCCCc-eEEEEECCcC-cccccceEEEe-cCCceEEEecCCCCCCcEEE
Confidence 455666543 456677899999999999666 7888 9999999988 65544222111 11227999999999999999
Q ss_pred EEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEE-EecCCCCeeEEEeCCe---E
Q psy3823 87 CWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI-QANPPYKKLIWTHNGI---T 161 (365)
Q Consensus 87 C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~i~W~~~~~---~ 161 (365)
|.|.+..+... ..+.|.|.. ...|.+.. ....+.+|+.+.|.|.+ .+.|.+. +.|++++. +
T Consensus 79 C~a~n~~g~~~s~~~~l~v~~-------~~~p~~~~------~~~~~~~G~~v~l~C~~~~~~p~~~-v~W~~~~~~~~~ 144 (395)
T 1bih_A 79 CFAETPAGVASSRVISFRKTY-------LIASPAKT------HEKTPIEGRPFQLDCVLPNAYPKPL-ITWKKRLSGADP 144 (395)
T ss_dssp EEEEETTEEEECCCEEEEEEE-------EECCCCEE------EEECCBTTEEEEECCCCCEEESCCE-EEEEEEETTSCG
T ss_pred EEEEeCCCeEEeEEEEEEEEE-------eecCCcCC------cceeeeeCCcEEEEecCCCCCCCCe-EEEEecCCCcCc
Confidence 99999877654 446666522 11233222 22457799999999996 6778776 99999751 1
Q ss_pred EeeC---CCCceEEeeceEEEeeecCCCCe---EEEEEEEcCCCCCCcccEEEEEeeeee---cccccCCCCceecCccc
Q psy3823 162 ISNN---ASAGRIITNQTLVLQSVTRHSGG---LYACSAINSQGEGGSTPFDLNINKMVN---LIFNSIDEPVCKQSQQR 232 (365)
Q Consensus 162 l~~~---~~~~~~~~~~~l~i~~~~~~d~G---~Y~C~~~~~~~~~~s~~~~l~v~~~~~---~~~~~~~~p~~~~~~~~ 232 (365)
.... ........+++|.|.+++..|+| .|+|.+.|..+.... ........... ........|.+. ..
T Consensus 145 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~---~~ 220 (395)
T 1bih_A 145 NADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEV-VLVEYEIKGVTKDNSGYKGEPVPQYV---SK 220 (395)
T ss_dssp GGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCE-EEEEEEECCCBCCSSCCCCCCEEEEE---CC
T ss_pred ccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEE-EeeeEEecccccccccccCCcCceec---CC
Confidence 1110 11112233678999999999999 999999999886542 22111110000 000000122221 12
Q ss_pred eeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCc-eeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcccee-
Q psy3823 233 IYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLT-SYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRT- 310 (365)
Q Consensus 233 ~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~-~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~- 310 (365)
...+..|+.+.|.|.+.+.|.+. +.|+++|......... .........+.|.|.+++.+|+|.|+|.|.|..|....
T Consensus 221 ~~~~~~G~~v~l~C~~~g~p~~~-i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 299 (395)
T 1bih_A 221 DMMAKAGDVTMIYCMYGSNPMGY-PNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKH 299 (395)
T ss_dssp SEEEETTSCEEEEEEEECSSCCC-CEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEE
T ss_pred ceEEECCCcEEEEEEeccCCCCe-EEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEE
Confidence 23388999999999999999998 9999998644332211 11111222236999999999999999999999998655
Q ss_pred cEEEEEEcCc
Q psy3823 311 PCTFHVVKAG 320 (365)
Q Consensus 311 ~~~l~v~~~~ 320 (365)
++.|.|..++
T Consensus 300 ~~~l~V~~~P 309 (395)
T 1bih_A 300 SLKLTVVSAP 309 (395)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEcCC
Confidence 7788776443
No 37
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.97 E-value=2.9e-30 Score=230.51 Aligned_cols=277 Identities=18% Similarity=0.248 Sum_probs=189.9
Q ss_pred CeEeeCCceEEEEecCCcEEEEEEeCCC----CCcceEEEEeCCCcC--------------C--CCCCceeEe-cCCeEE
Q psy3823 12 PVCKQSQQRIYGALRNEQVLVSCTVDAN----PQAQYFTWAFNNSGT--------------A--PRPLTSYSI-QDGSTS 70 (365)
Q Consensus 12 p~~~~~~~~~~~v~~G~~~~l~C~~~~~----p~~~~v~W~~~~~~~--------------l--~~~~~~~~~-~~~~~~ 70 (365)
|......+..+.+.+|+.++|.|...+. +.+ .+.|++++... + ....+.... ......
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~-~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 92 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKIT-QVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDG 92 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEE-EEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBC
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceE-EEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCc
Confidence 4444445667889999999999996655 344 89999965210 0 011111111 112234
Q ss_pred EEEEccCCCCCCeEEEEE-EEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecC---CcEEEEEE-EE
Q psy3823 71 VARYTPTSELEYGTLLCW-ARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEG---VDIYFDCH-IQ 145 (365)
Q Consensus 71 ~l~i~~~~~~d~G~Y~C~-a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g---~~v~l~C~-~~ 145 (365)
+|.|.+++.+|+|.|+|. +.+..+.....+.|.| ..+|.+.+.... ....+.+| +.+.|.|. ..
T Consensus 93 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V---------~~~p~~~~~~~~--~~~~~~~g~~~~~~~l~C~~~~ 161 (331)
T 3u83_A 93 TIRLSRLELEDEGVYICEFATFPTGNRESQLNLTV---------MAKPTNWIEGTQ--AVLRAKKGQDDKVLVATCTSAN 161 (331)
T ss_dssp CEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEE---------EBCCEEEEEECS--SCEEECTTCCCCEEEEEEEEEE
T ss_pred eEEEcccCcccCcEEEEEEEecCCCccEEEEEEEE---------ecCCcceeecCC--CceeecCCCccceEEEEEEecC
Confidence 799999999999999998 4555565567888888 567766544332 33456777 77999998 77
Q ss_pred ecCCCCeeEEEeC--CeEEee--CCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccC
Q psy3823 146 ANPPYKKLIWTHN--GITISN--NASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSI 221 (365)
Q Consensus 146 ~~p~~~~i~W~~~--~~~l~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~ 221 (365)
+.|.+. +.|+++ +..... ............|.|.++..+|+|.|+|.+.|..+... ..+.|.|.
T Consensus 162 ~~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~-~~~~l~V~---------- 229 (331)
T 3u83_A 162 GKPPSV-VSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFK-ESLTLNVQ---------- 229 (331)
T ss_dssp EBSCCE-EEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEE-EEEECCEE----------
T ss_pred CcCCce-EEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcce-eeEEEEEe----------
Confidence 888776 999995 332211 11112222345688888899999999999999887543 66777887
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEc-CCCcccCeEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYT-PTSELEYGTLLCW 300 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~-~v~~~d~G~Y~C~ 300 (365)
.+|.+.........+..|+.+.|.|.+.+.|.+..+.|++++...... .. ..+ ..|.|. ++..+|+|.|+|.
T Consensus 230 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~---~~-~~~---~~L~i~~~v~~~d~G~Y~C~ 302 (331)
T 3u83_A 230 YEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKG---VE-AQN---RTLFFKGPINYSLAGTYICE 302 (331)
T ss_dssp EEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT---EE-EET---TEEEECSCCCGGGCEEEEEE
T ss_pred cCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCccccc---ce-ecC---cEEEEeCCCccccCeEEEEE
Confidence 667665333232337889999999999999988559999988754221 11 122 259999 8999999999999
Q ss_pred EEcCCccceecEEEEEEcC
Q psy3823 301 ARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 301 a~n~~g~~~~~~~l~v~~~ 319 (365)
|.|..|..+.++.|.|..+
T Consensus 303 a~N~~G~~~~~~~l~V~~~ 321 (331)
T 3u83_A 303 ATNPIGTRSGQVEVNITEA 321 (331)
T ss_dssp EEETTEEEEEEEEECCBC-
T ss_pred EEeccccceEEEEEEEecc
Confidence 9999999998888888654
No 38
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.97 E-value=5e-31 Score=243.03 Aligned_cols=269 Identities=18% Similarity=0.274 Sum_probs=177.4
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCcee---EecCCeEEEEEEccCCCC
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSY---SIQDGSTSVARYTPTSEL 80 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~---~~~~~~~~~l~i~~~~~~ 80 (365)
+.+.+.++|.... .....+..|+.+.|.|.+.|+|.+ .++|++++.. +....... ..... ..| ...
T Consensus 133 ~~l~V~~~p~~~~--~~p~~~~~~~~~~L~C~a~G~P~P-~i~W~k~~~~-~~~~~~~~~~~~~~~~--~~l-----~~~ 201 (423)
T 3qs7_E 133 FTVSIRNTLLYTL--RRPYFRKMENQDALVCISESVPEP-IVEWVLCDSQ-GESCKEESPAVVKKEE--KVL-----HEL 201 (423)
T ss_dssp EEEEEC-----CE--EEEEEEECSSSSCEEEEEEESSCC-EEEEEEC--------------CEEECC--SEE-----CCC
T ss_pred EEEEEecCccccc--cCCcEeccCCceEEEEEEeeecCC-eEEEEECCCC-Cccccccccccccccc--eEE-----ecc
Confidence 3445555565422 233345678999999999899999 9999999876 43211100 00111 011 567
Q ss_pred CCeEEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeC
Q psy3823 81 EYGTLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHN 158 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~ 158 (365)
|+|.|+|.|.|..|... ..+.|.| ..+|.. .+ ....+.+|+.+.|.|.+.| .|.+. +.|+++
T Consensus 202 d~G~Y~C~A~N~~G~~~~~~~~l~V---------~~~p~~--~~----~~~~v~~G~~v~L~C~~~g~~p~p~-i~W~k~ 265 (423)
T 3qs7_E 202 FGTDIRCCARNELGRECTRLFTIDL---------NQTPQT--TL----PQLFLKVGEPLWIRCKAVHVNHGFG-LTWELE 265 (423)
T ss_dssp CSSCEEEEEECSSCEEEEECEEEES---------SSCCCS--ST----TEEEEETTSCEEEEEEEEESSSCCC-EEEEES
T ss_pred cCeEEEEEEEcCCCCcceeeEEEEE---------ecCCcc--CC----CceEEeCCCeEEEEEEEEcCCCCcE-EEEEEC
Confidence 99999999999988765 4577777 333332 11 2346789999999999998 45566 999999
Q ss_pred CeEEeeCCC--------CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCc
Q psy3823 159 GITISNNAS--------AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQ 230 (365)
Q Consensus 159 ~~~l~~~~~--------~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~ 230 (365)
+..+..... ........+|.|.+++.+|+|.|+|.|.|. .+..+.|.|. .+|.+...+
T Consensus 266 g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~----~~~~~~L~V~----------~~p~i~~~~ 331 (423)
T 3qs7_E 266 NKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH----PSQSALVTIV----------EKGFINATN 331 (423)
T ss_dssp SSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE----EEEEEEEEEE----------SSCEEEEC-
T ss_pred CEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC----CCceEEEEEE----------eCCcceEcC
Confidence 987643211 111333567999999999999999999988 4467888998 777665322
Q ss_pred -cceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccce
Q psy3823 231 -QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQR 309 (365)
Q Consensus 231 -~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 309 (365)
.....+.+|+.+.|.|.+.|.|.|. +.|+++|........ ...+. . .+.+.....+|+|.|+|.|.|..|..+
T Consensus 332 ~~~~~~v~~G~~v~l~C~~~g~P~p~-i~W~k~g~~l~~~~~---~~~~~-~-~~~~~~~~~~D~G~YtC~A~N~~G~~~ 405 (423)
T 3qs7_E 332 SSEDYEIDQYEEFCFSVRFKAYPQIR-CTWTFSRKSFPCEQK---GLDNG-Y-SISKFCNHKHQPGEYIFHAENDDAQFT 405 (423)
T ss_dssp --CEECCCTTCCCCEEEEEEEESCCE-EEEEETTEEEECBCC---BCSSS-S-EEEEECCCTTCCSCEEEEEEETTEEEE
T ss_pred CCccEEecCCCeEEEEEEEEEcCCCe-EEEEECCEECCCccc---cccCC-c-EEEEEecccccCEEEEEEEEcCCceEE
Confidence 2344478999999999999999998 999999864322110 00011 1 122245677999999999999999999
Q ss_pred ecEEEEEEcC
Q psy3823 310 TPCTFHVVKA 319 (365)
Q Consensus 310 ~~~~l~v~~~ 319 (365)
.++.|.|...
T Consensus 406 ~s~~L~v~~~ 415 (423)
T 3qs7_E 406 KMFTLNIRSG 415 (423)
T ss_dssp EEEEEC----
T ss_pred EEEEEEEecC
Confidence 9999988654
No 39
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.97 E-value=1.3e-29 Score=218.58 Aligned_cols=237 Identities=18% Similarity=0.297 Sum_probs=175.1
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRT 98 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~ 98 (365)
+....+.+|+.+.|.|.+.+.|.+..++|++++.. +... +. .|.|.+++.+|+|.|+|.+.+..+ ..
T Consensus 8 p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~-~~~~-------~~---~l~i~~~~~~d~G~Y~C~~~~~~~--s~ 74 (262)
T 3rjd_A 8 PPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTA-TQTS-------TP---SYRITSASVNDSGEYRCQRGLSGR--SD 74 (262)
T ss_dssp SCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEE-CSCC-------SS---EEEESSCCGGGCEEEEEEESSSCC--CC
T ss_pred CCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEE-eecc-------CC---eEEEecCCcccCeEEEEEEecCCc--cc
Confidence 44456789999999999777776558999999987 5532 22 789999999999999999986543 35
Q ss_pred cEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEE-ecCCCCeeEEEeCCeEEeeCCCCceEEeeceE
Q psy3823 99 PCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQ-ANPPYKKLIWTHNGITISNNASAGRIITNQTL 177 (365)
Q Consensus 99 ~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l 177 (365)
.+.|.| ..+|. .+.+ ....+.+|+.+.|.|.+. +.|.+. +.|++++..+.. ...+..|
T Consensus 75 ~~~l~v---------~~~~~-~~~~----~~~~~~~g~~v~l~C~~~~~~p~~~-v~W~~~g~~~~~------~~~~~~l 133 (262)
T 3rjd_A 75 PIQLEI---------HRGWL-LLQV----SSRVFTEGEPLALRCHAWKDKLVYN-VLYYRNGKAFKF------FHWNSNL 133 (262)
T ss_dssp CEEEEE---------ECSSE-EEEE----SCSEEETTSCEEEEEEEGGGCCCEE-EEEEETTEEEEE------EEECCCE
T ss_pred cEEEEE---------eccce-EecC----CCeEEecCCeEEEEEEccCCCCCce-EEEEECCccccc------cCCCCeE
Confidence 677777 33443 3333 234678999999999995 555444 999999998853 2235789
Q ss_pred EEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCC-Cc-
Q psy3823 178 VLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ-AQ- 255 (365)
Q Consensus 178 ~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~- 255 (365)
.|.+++.+|+|.|+|.+.|..+... ..+.|.|... ..+|.+.... . ..+..|+.+.|.|.+.+.|. +.
T Consensus 134 ~i~~~~~~d~G~Y~C~~~n~~~~~~-~~~~l~V~~~-------~~~p~~~~~~-~-~~~~~g~~~~l~C~~~~~p~~p~~ 203 (262)
T 3rjd_A 134 TILKTNISHNGTYHCSGMGKHRYTS-AGISVTVKEL-------FPAPVLNASV-T-SPLLEGNLVTLSCETKLLLQRPGL 203 (262)
T ss_dssp EESSCCGGGCEEEEEEEESSSEEEE-ECEEEEEECS-------SCCCEEEESS-C-SSEETTCCEEEEEECCCCCC----
T ss_pred EEEECChhhCEEEEEEEeCCCCccc-cceEEEeccC-------CCCCeEeecC-c-eeecCCCeEEEEeEcccCCCCCCc
Confidence 9999999999999999999885433 5677777711 0234443333 2 23789999999999999875 43
Q ss_pred --eeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 256 --YFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 256 --~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
.+.|++++.... .....+.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 204 ~~~~~w~~~~~~~~---------~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 204 QLYFSFYMGSKTLR---------GRNTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp -EEEEEEETTEEEE---------EEESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred cEEEEEEeCCcEec---------ccCCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 467888765321 11233469999999999999999999999975
No 40
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.97 E-value=2.7e-30 Score=230.47 Aligned_cols=269 Identities=16% Similarity=0.186 Sum_probs=172.9
Q ss_pred eeCCceEEEEecCCcEEEEEEeCCC-CCcceEEEEeCCCcCCCC---------CCceeEec-----CCeEEEEEEccCCC
Q psy3823 15 KQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSGTAPR---------PLTSYSIQ-----DGSTSVARYTPTSE 79 (365)
Q Consensus 15 ~~~~~~~~~v~~G~~~~l~C~~~~~-p~~~~v~W~~~~~~~l~~---------~~~~~~~~-----~~~~~~l~i~~~~~ 79 (365)
....+..+.+.+|+.++|.|.+.+. |.+ .++|+|++.. ... ........ ......|.|.+++.
T Consensus 6 v~~~p~~~~v~~G~~v~L~C~~~~~~p~~-~v~W~k~~~~-~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 83 (327)
T 2wng_A 6 VIQPDKSVSVAAGESAILHCTVTSLIPVG-PIQWFRGAGP-ARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITP 83 (327)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCC-CEEEEESCST-TCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCG
T ss_pred EEcCCCceEEecCCcEEEEEEccCcCCCc-eEEEEECCCC-CceEEEEcCCCCcceeeeecccccccCceeEEEEccCcc
Confidence 3344667889999999999997776 888 9999999864 320 00111100 12334799999999
Q ss_pred CCCeEEEEEEEeCCCCCc-----ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCC-ee
Q psy3823 80 LEYGTLLCWARNEQGNQR-----TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYK-KL 153 (365)
Q Consensus 80 ~d~G~Y~C~a~~~~~~~~-----~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~-~i 153 (365)
+|+|.|+|.+.+..+... ..+.|.|... ..+|.+. . +...+.+|+.+.|.|.+.+.|++. .+
T Consensus 84 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~------p~~p~i~--~----~~~~~~~g~~~~l~C~~~g~p~~~~~v 151 (327)
T 2wng_A 84 ADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAK------PSAPVVS--G----PAARATPQHTVSFTCESHGFSPRDITL 151 (327)
T ss_dssp GGCEEEEEEEEESSTTCEEEEECCCEEEEEEBC------CCCCEEE--C----CSSCBCTTCEEEEEEEEEEEBSSCCEE
T ss_pred ccCeEEEEEeecCCCcceeEeecCcEEEEEEec------CCCceee--c----cccccCCCCEEEEEEEEeCccCCCcEE
Confidence 999999999999765421 4567777311 1223332 2 224678899999999999887663 59
Q ss_pred EEEeCCeEEeeCC-------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCc--ccEEEEEeeeeecccccCCCC
Q psy3823 154 IWTHNGITISNNA-------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGS--TPFDLNINKMVNLIFNSIDEP 224 (365)
Q Consensus 154 ~W~~~~~~l~~~~-------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s--~~~~l~v~~~~~~~~~~~~~p 224 (365)
.|+++|..+.... ..........|.|.....+|.|.|+|.+.|..+.... ....+.+. ...+|
T Consensus 152 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~--------v~~~P 223 (327)
T 2wng_A 152 KWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSET--------IRVPP 223 (327)
T ss_dssp EEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGT--------BCBCC
T ss_pred EEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccc--------cCCCC
Confidence 9999998885322 1111222346777777777889999999998775321 12222111 11566
Q ss_pred ceecCccceeeeecCceEEEEEEEeeeCCCc-eeEEEeCCCCCCCCC-CceeEeeCCC---EEEEEEcCCCcccCeEEEE
Q psy3823 225 VCKQSQQRIYGALRNEQVLVSCTVDANPQAQ-YFTWAFNNSDTAPRP-LTSYSIQDGS---TSVARYTPTSELEYGTLLC 299 (365)
Q Consensus 225 ~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~~W~~~~~~~~~~~-~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C 299 (365)
.+...... +.+|+.+.|.|.+.+.|++. .+.|+++|....... .......++. .+.|.|..+..+|+|.|+|
T Consensus 224 ~i~~~~~~---~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C 300 (327)
T 2wng_A 224 TLEVTQQP---VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTC 300 (327)
T ss_dssp EEEEEEEC---CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEE
T ss_pred EEEEecCC---cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEE
Confidence 66543333 67899999999999965442 499999986432211 1111122332 2568899999999999999
Q ss_pred EEEcCCccc
Q psy3823 300 WARNEQGSQ 308 (365)
Q Consensus 300 ~a~n~~g~~ 308 (365)
.|.|..|..
T Consensus 301 ~a~N~~~~~ 309 (327)
T 2wng_A 301 QVEHDGQPA 309 (327)
T ss_dssp EEEETTCCC
T ss_pred EEEeCCCCC
Confidence 999999875
No 41
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.97 E-value=3.5e-31 Score=232.15 Aligned_cols=272 Identities=17% Similarity=0.151 Sum_probs=188.9
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEE
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 89 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 89 (365)
.+|.+. ..+..+.+.+|+.++|.|.+.+ .+.|++++.. .. ..........|.|.+++.+|+|.|+|.+
T Consensus 3 ~~P~i~-~~~~~~~v~~G~~v~L~C~~~~-----~v~W~~~~~~-~~-----~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 70 (292)
T 4dkd_C 3 SIPVIE-PSVPELVVKPGATVTLRCVGNG-----SVEWDGPPSP-HW-----TLYSDGSSSILSTNNATFQNTGTYRCTE 70 (292)
T ss_dssp -CCEEE-SCCSSCEECTTCCEEEEEECSS-----CCCBCCCCCS-SC-----EECCBTTEEEEEESSCCGGGCSCEEECC
T ss_pred CCceec-CCCCeEEEcCCCcEEEEEcCCC-----ceEEccCCCC-ce-----EEeccCceEEEEEcccccccCEEEEEEE
Confidence 345543 3344567899999999999765 3899976543 11 2223344568999999999999999999
Q ss_pred EeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC-CCeeEEEeC-CeEEeeCCC
Q psy3823 90 RNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP-YKKLIWTHN-GITISNNAS 167 (365)
Q Consensus 90 ~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~~~i~W~~~-~~~l~~~~~ 167 (365)
.+..+.....+.|.| ..+|....... ....+.+|+.+.|.|.+.+.+. +. +.|+++ +..+.. ..
T Consensus 71 ~n~~~~~~~~~~l~V---------~~~~~~~~~~~---~~~~v~~g~~v~l~C~~~~~~~~~~-v~W~~~~~~~~~~-~~ 136 (292)
T 4dkd_C 71 PGDPLGGSAAIHLYV---------KDPARPWNVLA---QEVVVFEDQDALLPCLLTDPVLEAG-VSLVRVRGRPLMR-HT 136 (292)
T ss_dssp CC----CCEEECCEE---------CCSSCCEEESC---SEEEEETTSCEECCEEESSGGGGSS-EEEEEGGGCCCCS-SC
T ss_pred ccCCCCcceEEEEEE---------cCccccccccC---CeEEEcCCCcEEEeeeCCCCCccee-EEEEecCCCcccc-CC
Confidence 998877778888888 44554322222 3346889999999999987332 44 999997 444432 21
Q ss_pred CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCC----CCceecCccceeeeecCceEE
Q psy3823 168 AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSID----EPVCKQSQQRIYGALRNEQVL 243 (365)
Q Consensus 168 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~----~p~~~~~~~~~~~~~~g~~~~ 243 (365)
......+..|.|.++...|+|.|+|.+.|..+...+..+.|.|. . +|.+...+.... +..|+.+.
T Consensus 137 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~----------~~~~~~p~i~~~~~~~~-~~~g~~v~ 205 (292)
T 4dkd_C 137 NYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQ----------KVIPGPPALTLVPAELV-RIRGEAAQ 205 (292)
T ss_dssp CEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEE----------CCCCSSCEEEEESSCBC-CCSSSCEE
T ss_pred cccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEe----------CCCCCCCeEEccCCcee-EecCCCEE
Confidence 22222355699999999999999999998877665567888888 5 666654443322 67999999
Q ss_pred EEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeC--CCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 244 VSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQD--GSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 244 l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~--~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
|.|.+.+.|++..+.|++++...... ........ ...+.|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 206 l~C~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 282 (292)
T 4dkd_C 206 IVCSASSVDVNFDVFLQHNNTKLAIP-QQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVES 282 (292)
T ss_dssp EEEEEEESSSCCEEECCBSSCCCCCC-BEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC---
T ss_pred EEEEecCCCCceEEEEeCCCcccccC-ccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeC
Confidence 99999987754447787876543221 11111111 12357999999999999999999999999999888888654
No 42
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.97 E-value=6.5e-31 Score=248.59 Aligned_cols=274 Identities=18% Similarity=0.236 Sum_probs=190.6
Q ss_pred eEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc-c
Q psy3823 20 RIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQR-T 98 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~-~ 98 (365)
..+....|+.+.|.|.+.++|.+ .++|++++.. +...... ... ........+...|+|.|+|.|.|..|... .
T Consensus 147 ~p~~~~~~~~~~L~C~a~G~P~P-~i~W~~~~~~-~~~~~~~---~~~-~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~ 220 (527)
T 3qs9_E 147 RPYFRKMENQDALVCISESVPEP-IVEWVLCDSQ-GESCKEE---SPA-VVKKEEKVLHELFGTDIRCCARNELGRECTR 220 (527)
T ss_dssp EEEEEECSSSSCEEEEEEESSCC-EEEEEEC------------------CEEECCSEECCCCSSCEEEEEECSSCEEEEE
T ss_pred CCcEEecCCceEEEEEEceecCC-eEEEEECCCC-Ccccccc---CCc-EEEEeeeeccccCCEEEEEEEEeCCCcccce
Confidence 34445678889999999999999 9999998876 4321110 011 01122233457899999999999988766 4
Q ss_pred cEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEE-ecCCCCeeEEEeCCeEEeeCCC--------Cc
Q psy3823 99 PCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQ-ANPPYKKLIWTHNGITISNNAS--------AG 169 (365)
Q Consensus 99 ~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~i~W~~~~~~l~~~~~--------~~ 169 (365)
.+.|.| ..+|.+ +. ....+.+|+.+.|.|.+. +.|.+. +.|++++..+..... ..
T Consensus 221 ~~~l~V---------~~~p~~---~p---~~~~v~~G~~v~L~C~~~~g~p~p~-i~W~k~g~~l~~~~~~~~~~~~~~~ 284 (527)
T 3qs9_E 221 LFTIDL---------NQTPQT---TL---PQLFLKVGEPLWIRCKAVHVNHGFG-LTWELENKALEEGNYFEMSTYSTNR 284 (527)
T ss_dssp CEEEES---------SSCCCC---SC---CEEEECTTSCEEEEEEEEESSSCCC-EEEECSSSCCCGGGEEEEEEEETTT
T ss_pred EEEEEE---------eccCcc---CC---CceEEeCCCeEEEEEEEccCCCCeE-EEEEECCEECCCCceeeeeeeccCc
Confidence 477877 444443 11 334678999999999997 777777 999999987653211 11
Q ss_pred eEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCc-cceeeeecCceEEEEEEE
Q psy3823 170 RIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQ-QRIYGALRNEQVLVSCTV 248 (365)
Q Consensus 170 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~-~~~~~~~~g~~~~l~C~~ 248 (365)
......+|.|.+++.+|+|.|+|.|.|. .+..+.|.|. .+|.+.... .....+..|+.+.|.|.+
T Consensus 285 ~~~~~~~L~I~~v~~~DsG~Y~C~a~N~----~~~~~~L~V~----------~~p~i~~~~~~~~~~v~~G~~v~L~C~~ 350 (527)
T 3qs9_E 285 TMIRILFAFVSSVARNDTGYYTCSSSKH----PSQSALVTIV----------EKGFINATNSSEDYEIDQYEEFCFSVRF 350 (527)
T ss_dssp EEEEEEEEEESSCCGGGCEEEEEEETTE----EEEEEEEEEC------------CEEECCCSCCEECCCTTCCCCEEEEE
T ss_pred ceeeEEEEEEccCCcccCeEEEEEEEeC----CCceEEEEEE----------ccCccccccCcccEEEcCCCeEEEEEEE
Confidence 1233467999999999999999999988 3467788888 667654322 223447899999999999
Q ss_pred eeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCcc-------
Q psy3823 249 DANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAGE------- 321 (365)
Q Consensus 249 ~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~------- 321 (365)
.|.|.|. +.|+++|........ . .. ....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..++.
T Consensus 351 ~g~P~p~-i~W~k~g~~l~~~~~-~--~~--~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~~~ 424 (527)
T 3qs9_E 351 KAYPQIR-CTWTFSRKSFPCEQK-G--LD--NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEASA 424 (527)
T ss_dssp EEESCCE-EEEEETTEEEECBCC-B--CS--SSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECCCC
T ss_pred EecCCCE-EEEEECCEECcCCcc-c--cc--CCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeCCC
Confidence 9999998 999998864322111 1 11 123588999999999999999999999999888888875544
Q ss_pred ----ccccCccccEEEEE
Q psy3823 322 ----CEHPVAVSHRYVAK 335 (365)
Q Consensus 322 ----c~~~l~~~~~~~~~ 335 (365)
|.+.-.|...+.|+
T Consensus 425 ~~l~C~a~g~P~p~i~W~ 442 (527)
T 3qs9_E 425 SQASCFSDGYPLPSWTWK 442 (527)
T ss_dssp E---EEEECSSCCEEEEE
T ss_pred CEEEEEEEEEcCCeEEEE
Confidence 77755666666664
No 43
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.97 E-value=3.8e-32 Score=243.64 Aligned_cols=278 Identities=16% Similarity=0.254 Sum_probs=195.5
Q ss_pred CceEEEEecCCcEEEEEEeC-------CCCCcceEEEEeCCCcCCCCCC--c-eeEecCCeEEEEEEccCCCCCCeEEEE
Q psy3823 18 QQRIYGALRNEQVLVSCTVD-------ANPQAQYFTWAFNNSGTAPRPL--T-SYSIQDGSTSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~-------~~p~~~~v~W~~~~~~~l~~~~--~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C 87 (365)
.+..+.+.+|+.+.|.|.+. +.|.+ .+.|++++.. +.... . .....++ .|.|.+++.+|+|.|+|
T Consensus 24 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~-~v~W~k~~~~-~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C 98 (339)
T 3o4o_C 24 HYKREFRLEGEPVALRCPQVPYWLWASVSPRI-NLTWHKNDSA-RTVPGEEETRMWAQDG---ALWLLPALQEDSGTYVC 98 (339)
T ss_dssp CSCCEEEETTBCCEEECTTSCSSCCSTTSSCC-BCCCEESSCC-SCCSCCSSSCEEEETT---EEEESSBCTTCCEEEEC
T ss_pred CceEEEEECCccEEEEeccccccccccCCCCc-eEEEEECCCC-cccCccccccEEeeCC---eEEECCCCcccCEEEEE
Confidence 44567789999999999976 88888 9999999876 32211 1 1223344 79999999999999999
Q ss_pred EEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEE-----EEecCCCCeeEEEeCCeEE
Q psy3823 88 WARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCH-----IQANPPYKKLIWTHNGITI 162 (365)
Q Consensus 88 ~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~-----~~~~p~~~~i~W~~~~~~l 162 (365)
.+.+..+.....+.|.|. .+|........ ....+.+|+.+.|.|. +.+.|.+. +.|+++|..+
T Consensus 99 ~~~n~~g~~~~~~~l~V~---------~~~~~~~~~~~--~~~~~~~g~~v~l~C~~~~~~~~g~p~~~-v~W~k~g~~~ 166 (339)
T 3o4o_C 99 TTRNASYCDKMSIELRVF---------ENTDAFLPFIS--YPQILTLSTSGVLVCPDLSEFTRDKTDVK-IQWYKDSLLL 166 (339)
T ss_dssp CEEETTEEEEEEEEEEEE---------CSCGGGHHHHC--EEEEEETTSCEEEECCSCTTTCCSSSCCC-BCCEESSCBC
T ss_pred EEECCcceEEEEEEEEEE---------cCCCccccccc--cceEEECCCCEEEEecCCcccccCCCCce-EEEecCCeeC
Confidence 999988777788888883 23221000000 1135778999999999 77888887 9999999888
Q ss_pred eeCCCCceEEe-eceEEEeeecCCCCeEEEEEEEcCCCCC---CcccEEEEEeeeeecccccCCCCceecCccceeeeec
Q psy3823 163 SNNASAGRIIT-NQTLVLQSVTRHSGGLYACSAINSQGEG---GSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALR 238 (365)
Q Consensus 163 ~~~~~~~~~~~-~~~l~i~~~~~~d~G~Y~C~~~~~~~~~---~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 238 (365)
........... ...|.|.+++.+|+|.|+|.+.|..|.. .+..+.|.|.... ...+|.+.... ....+..
T Consensus 167 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~-----~~~~P~i~~~~-~~~~v~~ 240 (339)
T 3o4o_C 167 DKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKK-----EETIPVIISPL-KTISASL 240 (339)
T ss_dssp CTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCC-----CCCCCEECCCS-CCCCCCC
T ss_pred CCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCC-----CCCCCEEecCC-ceeEecc
Confidence 65433222222 3589999999999999999999987642 2355667776110 00244554443 3334789
Q ss_pred CceEEEEEEE---eeeC-CCceeEEEeCCCCCCCCCC--------ceeEeeCCC---EEEEEEcCCCcccC-eEEEEEEE
Q psy3823 239 NEQVLVSCTV---DANP-QAQYFTWAFNNSDTAPRPL--------TSYSIQDGS---TSVARYTPTSELEY-GTLLCWAR 302 (365)
Q Consensus 239 g~~~~l~C~~---~~~p-~~~~~~W~~~~~~~~~~~~--------~~~~~~~~~---~s~l~i~~v~~~d~-G~Y~C~a~ 302 (365)
|+.+.|.|.+ .+.| .+. +.|+++|........ ......++. .+.|.|.+++.+|. |.|+|.|.
T Consensus 241 G~~v~L~C~~~~~~g~P~~~~-v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~ 319 (339)
T 3o4o_C 241 GSRLTIPCKVFLGTGTPLTTM-LWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVH 319 (339)
T ss_dssp CSCCCCCCCEEESSSCCSSCE-EEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEE
T ss_pred CCCEEEEEEEECCCCCCCCce-EEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEE
Confidence 9999999999 8888 666 999998865432111 111122332 23699999999997 99999999
Q ss_pred cCCccceecEEEEEEcC
Q psy3823 303 NEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 303 n~~g~~~~~~~l~v~~~ 319 (365)
|..|..+..+.+.+.++
T Consensus 320 N~~G~~~~~~~~~~~~~ 336 (339)
T 3o4o_C 320 NTLSFQTLRTTVKEHHH 336 (339)
T ss_dssp ETTEEECCBCCCCC---
T ss_pred eccCceEEEEEhhHhcc
Confidence 99999998887766543
No 44
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.97 E-value=3e-30 Score=233.62 Aligned_cols=251 Identities=12% Similarity=0.115 Sum_probs=182.3
Q ss_pred eEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCC-CC----------CCceeEe--c---CCeEEEEEEccCCCCCCe
Q psy3823 20 RIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTA-PR----------PLTSYSI--Q---DGSTSVARYTPTSELEYG 83 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l-~~----------~~~~~~~--~---~~~~~~l~i~~~~~~d~G 83 (365)
..+.+.+|+.++|.|.+.+.|.+ .+.|+|++...+ .. ....+.. . ......|.|.+++.+|+|
T Consensus 2 e~v~~~~G~~v~L~C~~~~~p~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G 80 (363)
T 1wio_A 2 KVVLGKKGDTVELTCTASQKKSI-QFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSD 80 (363)
T ss_dssp EEEEEETTSCEEECCCCTTCSSC-CEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCE
T ss_pred CeEEEeCCCeEEEEEEecCCCce-EEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCE
Confidence 35678999999999998788888 999999985411 10 0001110 0 112347999999999999
Q ss_pred EEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEe
Q psy3823 84 TLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITIS 163 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~ 163 (365)
.|+|.+.+.. ..+.|.|. . +.+. +...+.+|+++.|.|.+.+.|.+. +.|++++..+
T Consensus 81 ~Y~C~~~n~~----~~~~l~V~---------~---~~~~-----~~~~v~~G~~v~l~C~~~~~p~~~-v~W~~~~~~~- 137 (363)
T 1wio_A 81 TYICEVEDQK----EEVQLLVF---------G---LTAN-----SDTHLLQGQSLTLTLESPPGSSPS-VQCRSPRGKN- 137 (363)
T ss_dssp EEEEEETTEE----EEEEEEEE---------E---EEES-----SCSSEESBSCEEEEEECCTTCCCC-EEEECSSSCE-
T ss_pred EEEEEEEECC----CcEEEEEE---------e---CCCC-----CceEEecCCCEEEEEEcCCCCCCe-EEEEcCCCcc-
Confidence 9999998763 36777772 1 1222 123578999999999999888776 9999987654
Q ss_pred eCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEE
Q psy3823 164 NNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVL 243 (365)
Q Consensus 164 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~ 243 (365)
......|.|.+++.+|+|.|+|.+.+..+... ..+.+.|. ..|... ....+.+|+.+.
T Consensus 138 -------~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~-~~~~l~v~----------~~p~~~----~~~~~~~G~~v~ 195 (363)
T 1wio_A 138 -------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVE-FKIDIVVL----------AFQKAS----SIVYKKEGEQVE 195 (363)
T ss_dssp -------EEESSEEEECSBCGGGCEECEEEEEETTEEEE-ECCEECEE----------CCSCSE----EEEEEETBCCEE
T ss_pred -------cccceEEEEeeCChhcCCEEEEEEecCCCeEE-EEEEEEEe----------cCCCCC----CceEEecCCEEE
Confidence 23467899999999999999999998754332 44566666 455432 233378899999
Q ss_pred EEEEEee-----eCCCceeEEEeCCCCCCCC-------CCceeEee----------CCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 244 VSCTVDA-----NPQAQYFTWAFNNSDTAPR-------PLTSYSIQ----------DGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 244 l~C~~~~-----~p~~~~~~W~~~~~~~~~~-------~~~~~~~~----------~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
|.|.+.+ .|.+. +.|+++|...... .....+.. ......|.|.+++.+|+|.|+|.|
T Consensus 196 l~C~~~~~~~~~~P~p~-i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 274 (363)
T 1wio_A 196 FSFPLAFTVEKLTGSGE-LWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTL 274 (363)
T ss_dssp EECCCCCCCCSSCEEEE-EEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEE
T ss_pred EEEEEecccccCCCcee-EEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEE
Confidence 9998877 67777 9999998754432 22222211 222346999999999999999999
Q ss_pred EcC--CccceecEEEEEE
Q psy3823 302 RNE--QGSQRTPCTFHVV 317 (365)
Q Consensus 302 ~n~--~g~~~~~~~l~v~ 317 (365)
.|. .|..+..+.|.|.
T Consensus 275 ~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 275 ALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp CBTTTTCCEEEEEEEEEE
T ss_pred EEhhhcCeEEEEEeEEEE
Confidence 999 9998888888876
No 45
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.97 E-value=6.9e-30 Score=254.95 Aligned_cols=280 Identities=20% Similarity=0.277 Sum_probs=208.4
Q ss_pred EeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCC-CCCCe
Q psy3823 5 IFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTS-ELEYG 83 (365)
Q Consensus 5 ~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~-~~d~G 83 (365)
.+.+...|.... .....+.+|+.++|.|.+.+.|.+ .+.|++++.. +..........++ .|.|.++. .+|+|
T Consensus 521 ~l~V~~~p~~~~--~~~~~v~~G~~v~l~C~~~g~p~~-~i~W~k~~~~-l~~~~~~~~~~~~---~l~i~~v~~~~d~G 593 (816)
T 3dmk_A 521 KLNVYGLPYIRQ--MEKKAIVAGETLIVTCPVAGYPID-SIVWERDNRA-LPINRKQKVFPNG---TLIIENVERNSDQA 593 (816)
T ss_dssp EEEECSSCEECC--CCCEEEETTCCEEEECCEECSSEE-EEEEEETTEE-SCCSTTEEECTTS---EEEESSCCHHHHCE
T ss_pred EEEEecCCeeEc--cCCeEEecCCeEEEEEEecCCCCC-EEEEEECCeE-cccCCceEEecCC---eEEEEecCccccCE
Confidence 455566665433 233557899999999998888988 9999999988 7655554444555 79999998 68999
Q ss_pred EEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEE
Q psy3823 84 TLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITI 162 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l 162 (365)
.|+|.|.|..|... ..+.+.| ..+|.+..... ....+.+|+.++|.|.+.+.+++..+.|+++|..+
T Consensus 594 ~Y~C~a~n~~g~~~~~~~~v~v---------~~~p~~~~~~~---~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l 661 (816)
T 3dmk_A 594 TYTCVAKNQEGYSARGSLEVQV---------MVLPRIIPFAF---EEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAI 661 (816)
T ss_dssp EEEEEEEESSSCEEEEEEEEEE---------ECCCCCBCCCC---CSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCC
T ss_pred EEEEEEEECCCceeeeeEEEEE---------ecCCccccccc---cccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEc
Confidence 99999999887543 5667776 34444321111 23457899999999999877777569999999988
Q ss_pred eeCCCCceEE---eeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecC
Q psy3823 163 SNNASAGRII---TNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRN 239 (365)
Q Consensus 163 ~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g 239 (365)
.......... ....|.|.++...|+|.|+|.|.|..|... ..+.|.|. .+|.+...+.. ..+..|
T Consensus 662 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~----------~~P~~~~~~~~-~~v~~G 729 (816)
T 3dmk_A 662 SEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQ-FTTPLNVY----------VPPRWILEPTD-KAFAQG 729 (816)
T ss_dssp CGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEE-EEEEECEE----------EEEEEEECCCC-EEEETT
T ss_pred CCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEE-EEEEEEEE----------eCCceeeeccc-ceecCC
Confidence 5433322221 146799999999999999999999988665 56788888 77776654433 337899
Q ss_pred ceEEEEEEEeeeCCCceeEEEeCCCCCCCCCC-----ceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEE
Q psy3823 240 EQVLVSCTVDANPQAQYFTWAFNNSDTAPRPL-----TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTF 314 (365)
Q Consensus 240 ~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~-----~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 314 (365)
+.+.|.|.+.|.|.|. +.|++++........ ......++ .|.|.+++.+|+|.|+|.|.|..|....++.+
T Consensus 730 ~~v~l~C~~~g~P~p~-i~W~k~~~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~ 805 (816)
T 3dmk_A 730 SDAKVECKADGFPKPQ-VTWKKAVGDTPGEYKDLKKSDNIRVEEG---TLHVDNIQKTNEGYYLCEAINGIGSGLSAVIM 805 (816)
T ss_dssp CCEEEECEEEEESCCE-EECCEECSSSTTCCBCCCCBTTEEEETT---EEEECSCCGGGCEEEEEEEECSSSSCEEEEEE
T ss_pred CcEEEEEEEecCCCCe-EEEEecCCCCCccccccccCCCEEecCC---EEEECcCChhhCeEEEEEEEeCCCCCcEEEEE
Confidence 9999999999999998 999998753221110 01111222 59999999999999999999999999988888
Q ss_pred EEEcC
Q psy3823 315 HVVKA 319 (365)
Q Consensus 315 ~v~~~ 319 (365)
....+
T Consensus 806 ~~~~~ 810 (816)
T 3dmk_A 806 ISVQA 810 (816)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 76543
No 46
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=9.5e-29 Score=234.56 Aligned_cols=280 Identities=15% Similarity=0.190 Sum_probs=186.8
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCc-CCC------------CCCceeEecCCeEEEEEEccCCCCCCeE
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSG-TAP------------RPLTSYSIQDGSTSVARYTPTSELEYGT 84 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~-~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 84 (365)
++....+.+|+.++|.|.+.+.|.+ .+.|+|++.. .+. ...+......+....|.|.+++.+|+|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 84 (523)
T 2rcj_C 6 QPPSASGTPGQRVTISCTGTSSGSI-TVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESD 84 (523)
T ss_pred cCCceEEecCCcEEEEEEEeccCCc-eEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEE
Confidence 3556788999999999998788888 9999997521 011 0011112233445689999999999999
Q ss_pred EEEEEEeCCCCC---cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCC-CeeEEEeCCe
Q psy3823 85 LLCWARNEQGNQ---RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPY-KKLIWTHNGI 160 (365)
Q Consensus 85 Y~C~a~~~~~~~---~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~~i~W~~~~~ 160 (365)
|+|.|.+..+.. ...+.|.|... +..+|.+.+.+.. ..+.+|+.+.|.|.+.+.+++ ..+.|++||.
T Consensus 85 Y~C~a~n~~g~~~~~~~~~~l~V~~~-----~~~~P~~~~~~~~----~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~ 155 (523)
T 2rcj_C 85 YYCASWNSSDNSYVFGTGTKVTVLGQ-----PKANPTVTLFPPS----SEELQANKATLVCLISDFYPGAVTVAWKADGS 155 (523)
T ss_pred EEEEEccCCCccccccCceEEEeccC-----CCcCCeEEecCCc----ccccCCCceEEEEEeccccCCceEEEEecCCC
Confidence 999999876532 25567777211 1235665554422 345679999999999987765 3599999998
Q ss_pred EEeeCCCC--------ceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccc
Q psy3823 161 TISNNASA--------GRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQR 232 (365)
Q Consensus 161 ~l~~~~~~--------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~ 232 (365)
.+...... +.......|.|.++..+|+|.|+|.|.|..+... ..+.+.+.. ....+|.+......
T Consensus 156 ~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~-~~~~~~~~~------~~~~~P~v~~~~~~ 228 (523)
T 2rcj_C 156 PVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE-KTVAPTECS------ASTKGPSVFPLAPS 228 (523)
T ss_pred CCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccc-cceeeeecC------CCCcCCEEEecCCC
Confidence 87532111 1111134699999999999999999999887544 333332210 01145555422222
Q ss_pred eeeeecCceEEEEEEEeee-CCCceeEEEeCCCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 233 IYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 233 ~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
..+..|+.+.|.|.+.+. |.|..+.|+++|..............++. .+.|.|.++..+| |.|+|.|.|..|..
T Consensus 229 -~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~ 306 (523)
T 2rcj_C 229 -SKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 306 (523)
T ss_pred -cccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCc
Confidence 126789999999999886 76723999999864321111111112222 3579999999999 99999999999987
Q ss_pred eecEEEEE
Q psy3823 309 RTPCTFHV 316 (365)
Q Consensus 309 ~~~~~l~v 316 (365)
.....|.|
T Consensus 307 ~~~~~l~v 314 (523)
T 2rcj_C 307 KVDKRVEP 314 (523)
T ss_pred ceEEecCC
Confidence 66555543
No 47
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.97 E-value=3.3e-29 Score=222.40 Aligned_cols=265 Identities=14% Similarity=0.209 Sum_probs=172.2
Q ss_pred EEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCC-----CC
Q psy3823 22 YGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG-----NQ 96 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~-----~~ 96 (365)
..+.+|+.++|.|.+.+. .+ .+.|+|++.. +..... ...... .|.|.+++.+|+|.|+|.|.+..+ ..
T Consensus 33 ~~v~~G~~v~L~C~~~~~-~~-~~~W~k~g~~-~~~~~~-~~~~~~---~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~ 105 (316)
T 3vh8_G 33 AVVPRGGHVTLRCHYRHR-FN-NFMLYKEDRI-HIPIFH-GRIFQE---SFNMSPVTTAHAGNYTCRGSHPHSPTGWSAP 105 (316)
T ss_dssp SEEETTSCEEEEEEBTTB-CC-SEEEEESSCS-SSCHHH-HCCBSS---CEEECSCCGGGCEEEEEEEBCSSSSSSBCCC
T ss_pred CccCCCCCEEEEEEccCC-Cc-eEEEEeCCCc-cceeec-CCcceE---EEEECCCCcccCeEEEEEEEcCCCCcceecC
Confidence 357899999999997776 56 8999999987 443211 111223 799999999999999999986432 22
Q ss_pred cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCce---EEe
Q psy3823 97 RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGR---IIT 173 (365)
Q Consensus 97 ~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~---~~~ 173 (365)
...+.|.|... ..+|.+...+. ..+.+|+.++|.|.+.+ +++. +.|++++..+........ ...
T Consensus 106 s~~~~l~V~~~------~~~p~~~~~~~-----~~v~~G~~v~L~C~~~~-~~~~-~~w~k~g~~~~~~~~~~~~~~~~~ 172 (316)
T 3vh8_G 106 SNPVVIMVTGN------HRKPSLLAHPG-----PLVKSGERVILQCWSDI-MFEH-FFLHKEGISKDPSRLVGQIHDGVS 172 (316)
T ss_dssp CCCEEEEEECS------SCCCEEEEESC-----SEEETTCCEEEEEEESS-CCSE-EEEEETTCCSCCEEEECEEETTEE
T ss_pred CCcEEEEEecC------CCCCeEEecCC-----CccCCCCeEEEEEcCCC-CCcE-EEEEECCCccccceeeeeecCCCc
Confidence 36677777321 23566655432 24789999999999854 4444 999999876632111111 123
Q ss_pred eceEEEeeecCCCCeEEEEEEEcCCCCC----CcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEe
Q psy3823 174 NQTLVLQSVTRHSGGLYACSAINSQGEG----GSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVD 249 (365)
Q Consensus 174 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~~----~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 249 (365)
...|.|.+++.+|+|.|+|.+.|..+.. .+..+.|.|.. ...+|.+...+.. .+.+|+.++|.|.+.
T Consensus 173 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~-------~~~~p~i~~~~~~--~v~~G~~v~L~C~~~ 243 (316)
T 3vh8_G 173 KANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTG-------PYEKPSLSAQPGP--KVQAGESVTLSCSSR 243 (316)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEEC-------SSCCCEEEEESCS--CCCTTSCCEEEEEES
T ss_pred eEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecC-------CCCCCeEEeCCCC--eecCCCcEEEEEECC
Confidence 5689999999999999999999987742 24567777761 1134555433322 278999999999997
Q ss_pred eeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcc-----ceecEEEEEEcC
Q psy3823 250 ANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGS-----QRTPCTFHVVKA 319 (365)
Q Consensus 250 ~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~-----~~~~~~l~v~~~ 319 (365)
.|.+. +.|+++|....................|.|.+++ |+|.|+|.|.|..+. .+.++.|.|..+
T Consensus 244 -~~~~~-~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 314 (316)
T 3vh8_G 244 -SSYDM-YHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGN 314 (316)
T ss_dssp -SCCSE-EEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC-----
T ss_pred -CCCcE-EEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCC
Confidence 46676 9999998754321111111112233679999998 999999999997763 456666666543
No 48
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.97 E-value=3.5e-29 Score=219.17 Aligned_cols=263 Identities=12% Similarity=0.164 Sum_probs=173.1
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEe-cCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSI-QDGSTSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
...+.+.+|++++|.|.+.+. ++|++++.. +.. ..... .......|.|.+++.+|+|.|+|.|.|..|...
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~-----v~W~~~~~~-~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~ 78 (289)
T 3mjg_X 7 GPELVLNVSSTFVLTCSGSAP-----VVWERMSQE-PPQ--EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLET 78 (289)
T ss_dssp CSEEECCTTCCEEEEEEESSC-----CEEEBTTBC-CSE--EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------
T ss_pred CCeEEEeCCCcEEEEEeccce-----EEEECCCCC-ccc--ceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCc
Confidence 345678999999999997653 899999988 631 11111 222346899999999999999999998887622
Q ss_pred ---ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCC--eEEeeCCCCceEE
Q psy3823 98 ---TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNG--ITISNNASAGRII 172 (365)
Q Consensus 98 ---~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~--~~l~~~~~~~~~~ 172 (365)
..+.|.| ..++...+..........+.+|+.+.|.|.+. .|.+. +.|++++ ..+.. ...
T Consensus 79 ~~~~~~~v~v---------~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~-v~w~~~~~~~~~~~-----~~~ 142 (289)
T 3mjg_X 79 DERKRLYIFV---------PDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLV-VTLHEKKGDVALPV-----PYD 142 (289)
T ss_dssp CCCEEEEEEC---------CCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSC-EEEEESSCCSCCCC-----CEE
T ss_pred CcEEeEEEEE---------ECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCce-EEEEeCCCCCccce-----eec
Confidence 3444444 11111111110000013478899999999998 56666 9999854 33321 001
Q ss_pred eeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeC
Q psy3823 173 TNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANP 252 (365)
Q Consensus 173 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p 252 (365)
....+. ...|+|.|+|.+.|..+...+..+.+.+... .+|.+...+.. ..+..|+.+.|.|.+.+.|
T Consensus 143 ~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~--------~~p~i~~~~~~-~~v~~G~~v~L~C~~~g~p 209 (289)
T 3mjg_X 143 HQRGFS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV--------SSINVSVNAVQ-TVVRQGENITLMCIVIGNE 209 (289)
T ss_dssp TTTEEE----ECCCSSEEEEEEEETTEEEECCCEEEEECCC--------CCCCCEEEESC-SEEETTSCEEEEEEEESCS
T ss_pred CCcCee----eeccCcEEEEEEEeCCceeeeeeEEEEecCC--------CCCCcEEeCCc-ceeEcCCCEEEEEEECCCC
Confidence 111111 3579999999999887765556667777610 24544433333 3388999999999999999
Q ss_pred CCceeEEEeCCCCCCCCCCceeEee----CCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 253 QAQYFTWAFNNSDTAPRPLTSYSIQ----DGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 253 ~~~~~~W~~~~~~~~~~~~~~~~~~----~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
.+. +.|++++.............. ....+.|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 210 ~p~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~ 279 (289)
T 3mjg_X 210 VVN-FEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVV 279 (289)
T ss_dssp SBE-EEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred Ccc-eEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEE
Confidence 998 999987764322222111111 224567999999999999999999999999999999988754
No 49
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=1.3e-28 Score=233.68 Aligned_cols=272 Identities=12% Similarity=0.123 Sum_probs=183.1
Q ss_pred EEEecCCcEEEEEEeCCCCCc-ceEEEEeCCCcCCCCCCcee---EecCCe---EEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 22 YGALRNEQVLVSCTVDANPQA-QYFTWAFNNSGTAPRPLTSY---SIQDGS---TSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~p~~-~~v~W~~~~~~~l~~~~~~~---~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
..+.+|+.++|.|.+.+.|++ ..++|++++.. +....... ...++. .+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 124 ~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~-l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 202 (523)
T 2rcj_C 124 SEELQANKATLVCLISDFYPGAVTVAWKADGSP-VKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS 202 (523)
T ss_pred ccccCCCceEEEEEeccccCCceEEEEecCCCC-CCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCc
Confidence 345689999999997776653 39999999988 65433211 112222 24799999999999999999999888
Q ss_pred CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEEeCCeEEeeCCCCc----
Q psy3823 95 NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWTHNGITISNNASAG---- 169 (365)
Q Consensus 95 ~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~~~~l~~~~~~~---- 169 (365)
.....+.+.+.. ....+|.+.... ....+.+|+.+.|.|.+.|. |.+..|.|+++|..+.......
T Consensus 203 ~~~~~~~~~~~~-----~~~~~P~v~~~~----~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~ 273 (523)
T 2rcj_C 203 TVEKTVAPTECS-----ASTKGPSVFPLA----PSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQS 273 (523)
T ss_pred ccccceeeeecC-----CCCcCCEEEecC----CCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecC
Confidence 766555544310 113456554222 12346789999999999986 6664599999998754211111
Q ss_pred --eEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCcccee-eeecCceEEEEE
Q psy3823 170 --RIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIY-GALRNEQVLVSC 246 (365)
Q Consensus 170 --~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~-~~~~g~~~~l~C 246 (365)
.......|.|.++..+| |.|+|.|.|..|... ....+.+. ..|.+........ .+..|+.+.|.|
T Consensus 274 ~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~-~~~~l~v~----------~~P~~~~~~p~~~~~v~~g~~~~l~C 341 (523)
T 2rcj_C 274 SGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK-VDKRVEPL----------SLPSVFLFPPKPKDTLMISRTPEVTC 341 (523)
T ss_pred CCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcc-eEEecCCC----------cCceEEecCCCchhhcccCCceEEEE
Confidence 11124589999999999 999999999988754 44555555 4455432221111 267899999999
Q ss_pred EEeeeCCC---ceeEEEeCCCCCCCCCCcee-EeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEEE
Q psy3823 247 TVDANPQA---QYFTWAFNNSDTAPRPLTSY-SIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFH 315 (365)
Q Consensus 247 ~~~~~p~~---~~~~W~~~~~~~~~~~~~~~-~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 315 (365)
.+.|.|++ ..+.|+++|........... ...++. .+.|.|..+..+|+|.|+|.|.|..+.......+.
T Consensus 342 ~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~ 417 (523)
T 2rcj_C 342 VVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTIS 417 (523)
T ss_pred EEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEE
Confidence 99987543 14999999875433221111 122222 35689999999999999999999988765444444
No 50
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.97 E-value=1.1e-27 Score=222.17 Aligned_cols=297 Identities=13% Similarity=0.134 Sum_probs=191.9
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCc---ceEEEEeCC--CcCCC------------CCCceeEecCCeEEEEEEccCCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQA---QYFTWAFNN--SGTAP------------RPLTSYSIQDGSTSVARYTPTSELE 81 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~---~~v~W~~~~--~~~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d 81 (365)
+..+.+.+|+.++|.|.+.+.|.+ ..+.|+|++ .. +. ...+......+....|.|.+++.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (438)
T 1qgc_4 8 PASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQP-PKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADD 86 (438)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSC-CEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCC-cEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcC
Confidence 456778999999999998777752 289999974 21 10 0112122223445689999999999
Q ss_pred CeEEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeCC
Q psy3823 82 YGTLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHNG 159 (365)
Q Consensus 82 ~G~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~~ 159 (365)
+|.|+|.|.+..+... ....|.|... ..+|.+.+.+.. ....+|+.+.|.|.+.+ .|.+..+.|+++|
T Consensus 87 ~G~Y~C~a~n~~~~~~~~~~~l~V~~~------~~~P~v~~~~~~----~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g 156 (438)
T 1qgc_4 87 VATYYCQQSNEVPLTFGAGTKLDLKRA------DAAPTVSIFPPS----SEQLTSGGASVVCFLNNFYPKDINVKWKIDG 156 (438)
T ss_dssp CEEEEEEECSSTTCCBCCCEEEEECCC------CBCCEEEEECCC----HHHHHTTEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred CeeEEEEEecCCCccccCceeEEecCC------CCCCEEEecCCC----hhhccCCceEEEEEEccccCCCcEEEEEECC
Confidence 9999999998876442 5677777211 236776654322 23446889999999987 5666359999999
Q ss_pred eEEeeCC---------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCc
Q psy3823 160 ITISNNA---------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQ 230 (365)
Q Consensus 160 ~~l~~~~---------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~ 230 (365)
..+.... ..+.......|.|.++..+|+|.|+|.|.|..+.. .+.+.+.. ....+.+.. +
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~---~~~~~~~~-------~~~~~~~~~-~ 225 (438)
T 1qgc_4 157 SERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS---PIVKSFNR-------NECEVMLVE-S 225 (438)
T ss_dssp EEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS---CEEEEEET-------TC-CCEEEE-E
T ss_pred EEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCC---ceeccccc-------ccceeEEec-C
Confidence 9886430 11122224589999999999999999999987754 23344430 001122222 2
Q ss_pred cceeeeecCceEEEEEEEeeeC--CCceeEEEeC--CCCCC----------------CCCCceeEee--CCCEEEEEEcC
Q psy3823 231 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFN--NSDTA----------------PRPLTSYSIQ--DGSTSVARYTP 288 (365)
Q Consensus 231 ~~~~~~~~g~~~~l~C~~~~~p--~~~~~~W~~~--~~~~~----------------~~~~~~~~~~--~~~~s~l~i~~ 288 (365)
.. ..+.+|+.+.|.|.+.+.| .+. +.|+++ +.... ....+..... ......|.|.+
T Consensus 226 ~~-~~v~~G~~v~L~C~~~g~p~~~~~-v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 303 (438)
T 1qgc_4 226 GG-GLVKPGGSLKLSCTASGFIFNRCA-MSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSS 303 (438)
T ss_dssp CC-EEECTTCCEEEEEEEESSCGGGSC-EEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECS
T ss_pred Cc-eEEecCCcEEEEEEEcccccCCcE-EEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECC
Confidence 22 3388999999999999988 566 999986 32110 0012222221 23456799999
Q ss_pred CCcccCeEEEEEEEcCCc-----cceecEEEEEEcC---cc-cc-----ccCccccEEEEEEEEE
Q psy3823 289 TSELEYGTLLCWARNEQG-----SQRTPCTFHVVKA---GE-CE-----HPVAVSHRYVAKLYAT 339 (365)
Q Consensus 289 v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~~---~~-c~-----~~l~~~~~~~~~~~~~ 339 (365)
++.+|+|.|+|.|.|..+ .......+.|... .| .. ..+..|...++.|.+.
T Consensus 304 v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~ 368 (438)
T 1qgc_4 304 LRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVK 368 (438)
T ss_dssp CCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEE
T ss_pred CChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEec
Confidence 999999999999999554 2234456666531 11 11 1244566666666554
No 51
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.96 E-value=8.1e-29 Score=214.28 Aligned_cols=243 Identities=20% Similarity=0.269 Sum_probs=174.5
Q ss_pred EEecCCcEEEEEEeCC-CCCc-ceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeE--EEEEEEeCCCCCcc
Q psy3823 23 GALRNEQVLVSCTVDA-NPQA-QYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGT--LLCWARNEQGNQRT 98 (365)
Q Consensus 23 ~v~~G~~~~l~C~~~~-~p~~-~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~--Y~C~a~~~~~~~~~ 98 (365)
.+.+|+.++|.|.+.+ .|.+ ..++|++++.. +.. .....+.......+..++..|.|. |+|.+.+..+....
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~-l~~---~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~ 89 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQR-LNP---TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQET 89 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEE-CCC---EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEE-CCc---eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEE
Confidence 5789999999999666 6653 39999999988 654 122233322222222336778775 99999998887778
Q ss_pred cEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEE
Q psy3823 99 PCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLV 178 (365)
Q Consensus 99 ~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~ 178 (365)
.+.|.|.. ..+|.+.. ....+.+|+.+.|.|.+. |.+. +.| +|..+.... ....|.
T Consensus 90 ~~~l~V~~-------~p~p~~~~------~~~~v~~G~~v~l~C~~~--p~~~-i~W--~g~~~~~~~------~~~~l~ 145 (265)
T 2oz4_A 90 LQTVTIYS-------FPAPNVIL------TKPEVSEGTEVTVKCEAH--PRAK-VTL--NGVPAQPLG------PRAQLL 145 (265)
T ss_dssp EEEEEEEC-------CCCCEEEE------SCSEEETTCEEEEEEECC--TTSE-EEE--SSCSSSCCS------SEECCE
T ss_pred EEEEEEeC-------CCCceeec------CCceecCCCcEEEEEEcc--CCCE-EEE--CCEEccCCC------CcEEEE
Confidence 88888821 11344432 334678899999999987 6555 999 777663211 235688
Q ss_pred EeeecCCCCeEEEEEEEcCC-CCCC--cccEEEEEeeeeecccccCCCCceecCc-cceeeeecCceEEEEEEEeeeCCC
Q psy3823 179 LQSVTRHSGGLYACSAINSQ-GEGG--STPFDLNINKMVNLIFNSIDEPVCKQSQ-QRIYGALRNEQVLVSCTVDANPQA 254 (365)
Q Consensus 179 i~~~~~~d~G~Y~C~~~~~~-~~~~--s~~~~l~v~~~~~~~~~~~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~~ 254 (365)
|..+..+|+|.|+|.+.|.. |... +..+.|.|. ++|.+.... .....+.+|+.+.|.|.+.|.|.|
T Consensus 146 i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~----------~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p 215 (265)
T 2oz4_A 146 LKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVL----------YGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLP 215 (265)
T ss_dssp EECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEE----------EEEECCGGGSCSEEEEETTCEECCCCCCEEESCC
T ss_pred EccccccCCceEEEEEEcCCCCCcccccccEEEEEE----------eCCccccccCCCccEEcCCCeEEEEeECccCCCC
Confidence 99999999999999998654 5432 255778887 666654332 223348899999999999999999
Q ss_pred ceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEc
Q psy3823 255 QYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 255 ~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
. +.|++++.. ....+. + ..++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 216 ~-i~W~~~~~~---------~~~~g~---~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 216 E-LKCLKDGTF---------PLPIGE---S--VTVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp E-EEEEETTTE---------ECCTTS---C--EECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred e-EEEEECCcc---------cCCCCc---E--EEeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 8 999998861 112232 1 13778999999999999999999999998874
No 52
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.96 E-value=1.4e-27 Score=229.63 Aligned_cols=270 Identities=14% Similarity=0.166 Sum_probs=186.4
Q ss_pred eEEEEecCCcEEEEEEeCCCCC---cceEEEE-eCCCc---CCCC--------CCceeEec--CCeEEEEEEccCCCCCC
Q psy3823 20 RIYGALRNEQVLVSCTVDANPQ---AQYFTWA-FNNSG---TAPR--------PLTSYSIQ--DGSTSVARYTPTSELEY 82 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p~---~~~v~W~-~~~~~---~l~~--------~~~~~~~~--~~~~~~l~i~~~~~~d~ 82 (365)
..+.+.+|+.+.|.|.+. .|. + .+.|+ +++.. .+.. ........ ......|.|.+++.+|.
T Consensus 225 ~~~~~~~G~~v~l~C~~~-~~~~~~~-~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~ 302 (585)
T 2ocw_A 225 ELVYEDLRGSVTFHCALG-PEVANVA-KFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDA 302 (585)
T ss_pred ceeEEcCCCcEEEEEEcC-CCCCCce-EEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhC
Confidence 445678999999999963 343 4 88997 77732 0110 11111111 12233799999999999
Q ss_pred eEEEEEEEeCCCCCc----ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCee----E
Q psy3823 83 GTLLCWARNEQGNQR----TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKL----I 154 (365)
Q Consensus 83 G~Y~C~a~~~~~~~~----~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i----~ 154 (365)
|.|+|.|.|...... ..+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.+.|.+. + .
T Consensus 303 G~Y~C~a~n~g~~~~~~~~~~~~l~V---------~~~p~~~~~~----~~~~~~~G~~v~l~C~~~~~p~p~-i~~w~~ 368 (585)
T 2ocw_A 303 GRYLCGAHSDGQLQEGSPIQAWQLFV---------NEESTIPRSP----TVVKGVAGSSVAVLCPYNRKESKS-IKYWCL 368 (585)
T ss_pred EEEEEEEEcCCCccccCceeeEEEEE---------ecccccccCC----cceEEEeCCcEEEEEecCCCCCcc-EEEEEE
Confidence 999999999543332 6777888 5566544332 334678999999999999988886 5 7
Q ss_pred EEe--CCe--EEeeCC-------CCceEE----eec--eEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecc
Q psy3823 155 WTH--NGI--TISNNA-------SAGRII----TNQ--TLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLI 217 (365)
Q Consensus 155 W~~--~~~--~l~~~~-------~~~~~~----~~~--~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~ 217 (365)
|++ ||. .+.... ..+... .++ +|.|.+++.+|+|.|+|.+ |..|... ..+.|.|.
T Consensus 369 W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~-~~~~l~V~------ 440 (585)
T 2ocw_A 369 WEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWR-TTVEIKII------ 440 (585)
T ss_pred EEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccc-eeEEEEEe------
Confidence 999 887 443211 111111 123 4999999999999999999 7777554 66788887
Q ss_pred cccCCC-CceecCccceeeeecCceEEEEEEEe----eeCCCceeEEEeCCCCCCCCCCc------eeEeeCCCEEEEEE
Q psy3823 218 FNSIDE-PVCKQSQQRIYGALRNEQVLVSCTVD----ANPQAQYFTWAFNNSDTAPRPLT------SYSIQDGSTSVARY 286 (365)
Q Consensus 218 ~~~~~~-p~~~~~~~~~~~~~~g~~~~l~C~~~----~~p~~~~~~W~~~~~~~~~~~~~------~~~~~~~~~s~l~i 286 (365)
.. |.+.. +.. ..+..|+.+.|.|.+. +.|.+. +.|+++|......... .....++..+.|.|
T Consensus 441 ----~~~p~~~~-~~~-~~v~~G~~v~L~C~~~~~~~~~p~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 513 (585)
T 2ocw_A 441 ----EGEPNLKV-PGN-VTAVLGETLKVPCHFPCKFSSYEKYW-CKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTL 513 (585)
T ss_pred ----cCcccccc-CCc-eeEecCCcEEEEEEecCCCCCCccEE-EEEeecCceeeeccCCCCCcceEEecCcccEEEEEE
Confidence 43 43332 222 3388999999999997 567777 9999998754332211 11122455678999
Q ss_pred cCCCcccCeEEEEEEEcCCcccee-cEEEEEEcCc
Q psy3823 287 TPTSELEYGTLLCWARNEQGSQRT-PCTFHVVKAG 320 (365)
Q Consensus 287 ~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~~ 320 (365)
.+++.+|+|.|+|.|.|..|.... .+.|.|..++
T Consensus 514 ~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 514 NLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred CCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 999999999999999999997654 4788887664
No 53
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.96 E-value=5.1e-27 Score=225.63 Aligned_cols=301 Identities=12% Similarity=0.162 Sum_probs=201.2
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEeCCC-CCcceEEEEeCCCcCCCC-------------CCceeEecC---
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSGTAPR-------------PLTSYSIQD--- 66 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~-p~~~~v~W~~~~~~~l~~-------------~~~~~~~~~--- 66 (365)
+.+.+..+|.+. ..+....+.+|+.++|.|.+.+. |.+ .+.|++++.. ... ........+
T Consensus 105 ~~l~V~~~p~~~-~~~~~~~v~~G~~v~l~C~~~~~~~~~-~v~W~k~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 181 (585)
T 2ocw_A 105 VSLEVSQGPGLL-NDTKVYTVDLGRTVTINCPFKTENAQK-RKSLYKQIGL-YPVLVIDSSGYVNPNYTGRIRLDIQGTG 181 (585)
T ss_pred EEEEEecCcccc-CCCccEEEEcCCCEEEEEEecCCCCCc-cEEEEECCCC-CceEEecCCcccCccccCcEEEEeccCC
Confidence 455566667543 34556778999999999997654 455 8999999764 210 111111111
Q ss_pred CeEEEEEEccCCCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe
Q psy3823 67 GSTSVARYTPTSELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA 146 (365)
Q Consensus 67 ~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 146 (365)
.....|.|.+++.+|+|.|+|.|.+..+.....+.|.| ..+|. ....+.+|+.+.|.|.+.+
T Consensus 182 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V---------~~~~p---------~~~~~~~G~~v~l~C~~~~ 243 (585)
T 2ocw_A 182 QLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQV---------LKPEP---------ELVYEDLRGSVTFHCALGP 243 (585)
T ss_pred CcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEE---------ccCCC---------ceeEEcCCCcEEEEEEcCC
Confidence 12347999999999999999999998888778889988 33221 1124678999999999743
Q ss_pred cCCC-CeeEEE-eCCe---EEeeCC-------CCceEEe----ec--eEEEeeecCCCCeEEEEEEEcCCCCCC---ccc
Q psy3823 147 NPPY-KKLIWT-HNGI---TISNNA-------SAGRIIT----NQ--TLVLQSVTRHSGGLYACSAINSQGEGG---STP 205 (365)
Q Consensus 147 ~p~~-~~i~W~-~~~~---~l~~~~-------~~~~~~~----~~--~l~i~~~~~~d~G~Y~C~~~~~~~~~~---s~~ 205 (365)
.+++ ..+.|+ ++|. .+.... ..+.... ++ +|.|.+++.+|+|.|+|.+.|..+... ...
T Consensus 244 ~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~ 323 (585)
T 2ocw_A 244 EVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQA 323 (585)
T ss_pred CCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceee
Confidence 3322 348887 7873 221110 1111111 23 799999999999999999999533321 256
Q ss_pred EEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCcee----EEEe--CCC--CCCCC--------
Q psy3823 206 FDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYF----TWAF--NNS--DTAPR-------- 269 (365)
Q Consensus 206 ~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~----~W~~--~~~--~~~~~-------- 269 (365)
+.|.|. .+|.+...+.. ..+..|+.+.|.|.+.+.|.+. + .|++ +|. .....
T Consensus 324 ~~l~V~----------~~p~~~~~~~~-~~~~~G~~v~l~C~~~~~p~p~-i~~w~~W~~~~~g~~~~l~~~~~~~~~~~ 391 (585)
T 2ocw_A 324 WQLFVN----------EESTIPRSPTV-VKGVAGSSVAVLCPYNRKESKS-IKYWCLWEGAQNGRCPLLVDSEGWVKAQY 391 (585)
T ss_pred EEEEEe----------cccccccCCcc-eEEEeCCcEEEEEecCCCCCcc-EEEEEEEEccCCCCCceeeeecceeeccc
Confidence 778888 77776654433 3388999999999999999887 5 7998 765 22110
Q ss_pred CCceeEee--CCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCcc-----ccccCccccEEEEEEEE
Q psy3823 270 PLTSYSIQ--DGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAGE-----CEHPVAVSHRYVAKLYA 338 (365)
Q Consensus 270 ~~~~~~~~--~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~-----c~~~l~~~~~~~~~~~~ 338 (365)
..+..+.. ......|.|.+++.+|+|.|+|.| |..|..+..+.|.|...++ -.+.+..|...++.|.+
T Consensus 392 ~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~ 466 (585)
T 2ocw_A 392 EGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHF 466 (585)
T ss_pred CCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEe
Confidence 11222221 223346999999999999999999 9999988888998875433 11234445555555544
No 54
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=8.3e-28 Score=223.77 Aligned_cols=259 Identities=18% Similarity=0.224 Sum_probs=182.7
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceE-----EEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeC
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYF-----TWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNE 92 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v-----~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~ 92 (365)
++....+.+|+.++|.|.+.+ |.+ .+ .|+|++.. +.. .....|.|.+++. |+| |+|.|.+.
T Consensus 5 ~P~~~~v~~G~~v~L~C~~~g-p~p-~~~~~~~~w~k~~~~-~~~---------~~~~~l~i~~v~~-d~g-Y~C~a~~~ 70 (450)
T 1z7z_I 5 SPSKVILPRGGSVLVTCSTSC-DQP-MLLGIETPLPKKELL-LPG---------NNRKVYELSNVQE-DSQ-PMCYSNCP 70 (450)
T ss_dssp ESSEEEEETTEEEEEEEECCS-SCC-CEEEECSSSCEEECC-SST---------TTEEEEEEEEECS-CBC-CEEEEEET
T ss_pred CCCceEEecCCcEEEEEEccC-CCc-ccccccceeeecceE-ecC---------CCceEEEEEeccc-CCe-eEEEEeCC
Confidence 345677899999999999877 888 88 89998875 332 2223788999987 999 99999866
Q ss_pred CCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCC--eeEEEeCCeEEeeCCCCce
Q psy3823 93 QGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYK--KLIWTHNGITISNNASAGR 170 (365)
Q Consensus 93 ~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~--~i~W~~~~~~l~~~~~~~~ 170 (365)
.+.....+.|.| ..+|.+..... .+..+.+|+.+.|.|.+.+.+++. .+.|++++..+.......
T Consensus 71 ~~~~~~~~~l~V---------~~~P~~~~~~~---~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~- 137 (450)
T 1z7z_I 71 DGQSTAKTFLTV---------YWTPERVELAP---LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG- 137 (450)
T ss_dssp TEEEEEECEEEE---------EBCCSEEEECC---CCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT-
T ss_pred CCcceeEEEEEE---------EeCCCcceecC---CCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccc-
Confidence 655557788888 55665442221 224688999999999999988773 489999999886432111
Q ss_pred EEeeceEEEeeecCCCCeEEEEEEEcCCCCCC-------cccEEEEEeeeeecccccCCCCceecCccceeeeecCceEE
Q psy3823 171 IITNQTLVLQSVTRHSGGLYACSAINSQGEGG-------STPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVL 243 (365)
Q Consensus 171 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-------s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~ 243 (365)
...+..|.|.++..+|+|.|+|.+.|..|... +....+.+... ...+|.+..+ ..+..|+.+.
T Consensus 138 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~------~~~~p~~~~~----~~v~~G~~v~ 207 (450)
T 1z7z_I 138 EPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVL------PATPPQLVSP----RVLEVDTQGT 207 (450)
T ss_dssp TTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCC------CSSCCEEECC----SEEETTSEEE
T ss_pred cccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeecc------CCCCCEecCc----eeEEeCCcEE
Confidence 12246899999999999999999999876432 12233444300 0022322211 3388999999
Q ss_pred EEEEEeee-C--CCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCe--EEEEEEEcCCccceecEEEEEEc
Q psy3823 244 VSCTVDAN-P--QAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYG--TLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 244 l~C~~~~~-p--~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G--~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
|.|.+.+. | .+. +.|+++|..... ......+.....+.+ +++.+|+| .|+|.|.|..|.....+.|.|..
T Consensus 208 l~C~~~g~~P~~~~~-~~W~~~~~~~~~---~~~~~~~~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~ 282 (450)
T 1z7z_I 208 VVCSLDGLFPVSEAQ-VHLALGDQRLNP---TVTYGNDSFSAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYS 282 (450)
T ss_dssp EEEEEESCTTGGGCE-EEEEETTEECCC---EEEEETTEEEEEEEE-ECCGGGCEEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEeeCCCCCCceE-EEEeCCCEeCCc---eEEecCCceeEEEEE-EeEhhhCCcEEEEEEEccCCccEEEEEEEEEec
Confidence 99999998 6 565 999998875432 222222222222223 67899999 99999999999988888888875
No 55
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=4.2e-28 Score=225.80 Aligned_cols=243 Identities=20% Similarity=0.256 Sum_probs=170.3
Q ss_pred EEEecCCcEEEEEEeCCC-C--CcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCe--EEEEEEEeCCCCC
Q psy3823 22 YGALRNEQVLVSCTVDAN-P--QAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYG--TLLCWARNEQGNQ 96 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~-p--~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G--~Y~C~a~~~~~~~ 96 (365)
..+.+|+.+.|.|.+.+. | .+ .++|++++.. +.. ......+.....+.+ +++.+|.| .|+|.+.|..+..
T Consensus 198 ~~v~~G~~v~l~C~~~g~~P~~~~-~~~W~~~~~~-~~~--~~~~~~~~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~ 272 (450)
T 1z7z_I 198 RVLEVDTQGTVVCSLDGLFPVSEA-QVHLALGDQR-LNP--TVTYGNDSFSAKASV-SVTAEDEGTQRLTCAVILGNQSQ 272 (450)
T ss_dssp SEEETTSEEEEEEEEESCTTGGGC-EEEEEETTEE-CCC--EEEEETTEEEEEEEE-ECCGGGCEEEEEEEEEEETTEEE
T ss_pred eeEEeCCcEEEEEEeeCCCCCCce-EEEEeCCCEe-CCc--eEEecCCceeEEEEE-EeEhhhCCcEEEEEEEccCCccE
Confidence 568899999999997777 6 66 9999999988 654 222223322222233 77899999 9999999998877
Q ss_pred cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeece
Q psy3823 97 RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQT 176 (365)
Q Consensus 97 ~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~ 176 (365)
.....|.|.. ..+|.+.. ....+.+|+.++|.|.+. |.+. +.| +|..+.... ....
T Consensus 273 ~~~~~l~V~~-------~~~p~i~~------~~~~v~~G~~v~l~C~~~--p~p~-i~W--~g~~~~~~~------~~~~ 328 (450)
T 1z7z_I 273 ETLQTVTIYS-------FPAPNVIL------TKPEVSEGTEVTVKCEAH--PRAK-VTL--NGVPAQPLG------PRAQ 328 (450)
T ss_dssp EEEEEEEEEC-------CCCCEEEE------SCSEEETTCEEEEEEEC---------------------C------CCCC
T ss_pred EEEEEEEEec-------CCCCeEec------CCeeEeCCCcEEEEEecC--CCCE-eEE--CCEEcCCCC------ceEE
Confidence 7778888831 12455443 234788999999999987 6666 999 777763211 2348
Q ss_pred EEEeeecCCCCeEEEEEEEcCCC-CC--CcccEEEEEeeeeecccccCCCCceecCc-cceeeeecCceEEEEEEEeeeC
Q psy3823 177 LVLQSVTRHSGGLYACSAINSQG-EG--GSTPFDLNINKMVNLIFNSIDEPVCKQSQ-QRIYGALRNEQVLVSCTVDANP 252 (365)
Q Consensus 177 l~i~~~~~~d~G~Y~C~~~~~~~-~~--~s~~~~l~v~~~~~~~~~~~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~~~p 252 (365)
|.|..+..+|+|.|+|.|.|..+ .. .+..+.|.|. ++|.+.... .....+.+|+.+.|.|.+.|.|
T Consensus 329 L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~----------~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P 398 (450)
T 1z7z_I 329 LLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVL----------YGPRLDERDCPGNWTWPENSQQTPMCQAWGNP 398 (450)
T ss_dssp EEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEE----------EEEECCSTTSCSEEEEETTCEECCCCCCEEES
T ss_pred EEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEe----------cCCceeeccCCCceeEcCCCeEEEEEecccCC
Confidence 99999999999999999997654 22 2255777887 677665443 2334488999999999999999
Q ss_pred CCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEc
Q psy3823 253 QAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 253 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
.|. +.|+++|.... ..+.. + .++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 399 ~p~-i~W~~~g~~~~---------~~g~~--~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 399 LPE-LKCLKDGTFPL---------PIGES--V---TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp CCE-EEEEETTTEEC---------CTTSC--E---ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCc-EEEEECCcccC---------CCCCe--E---eEehhhCeEEEEEEEeCCCceeEEEEEEEEc
Confidence 998 99999986221 12221 2 5778999999999999999999999998874
No 56
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.96 E-value=2.3e-28 Score=221.24 Aligned_cols=229 Identities=11% Similarity=0.099 Sum_probs=171.4
Q ss_pred EEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcccEEE
Q psy3823 23 GALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRTPCTF 102 (365)
Q Consensus 23 ~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~~~l 102 (365)
.+.+|+.++|.|.+.+.|.+ .++|++++.. + ..... .|.|.+++.+|+|.|+|.|.+..+.....+.|
T Consensus 107 ~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~-~-------~~~~~---~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l 174 (363)
T 1wio_A 107 HLLQGQSLTLTLESPPGSSP-SVQCRSPRGK-N-------IQGGK---TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDI 174 (363)
T ss_dssp SEESBSCEEEEEECCTTCCC-CEEEECSSSC-E-------EEESS---EEEECSBCGGGCEECEEEEEETTEEEEECCEE
T ss_pred EEecCCCEEEEEEcCCCCCC-eEEEEcCCCc-c-------cccce---EEEEeeCChhcCCEEEEEEecCCCeEEEEEEE
Confidence 56899999999998788999 9999999876 3 12333 89999999999999999999876655566777
Q ss_pred EEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-----cCCCCeeEEEeCCeEEeeC------CCCceE
Q psy3823 103 HVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-----NPPYKKLIWTHNGITISNN------ASAGRI 171 (365)
Q Consensus 103 ~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-----~p~~~~i~W~~~~~~l~~~------~~~~~~ 171 (365)
.| ..+|... ....+.+|+.+.|.|.+.+ +|.+. +.|+++|..+... ......
T Consensus 175 ~v---------~~~p~~~-------~~~~~~~G~~v~l~C~~~~~~~~~~P~p~-i~W~~~g~~~~~~~~~~~~~~~~~~ 237 (363)
T 1wio_A 175 VV---------LAFQKAS-------SIVYKKEGEQVEFSFPLAFTVEKLTGSGE-LWWQAERASSSKSWITFDLKNKEVS 237 (363)
T ss_dssp CE---------ECCSCSE-------EEEEEETBCCEEEECCCCCCCCSSCEEEE-EEEEESSCCCCCCEEEEEECSSCEE
T ss_pred EE---------ecCCCCC-------CceEEecCCEEEEEEEEecccccCCCcee-EEEecCCCCccceEEEEEecCCeee
Confidence 77 3333221 1235778999999998876 55666 9999999876541 011121
Q ss_pred E------------e--eceEEEeeecCCCCeEEEEEEEcC--CCCCCcccEEEEEeeeeecccccCCCCceecCccceee
Q psy3823 172 I------------T--NQTLVLQSVTRHSGGLYACSAINS--QGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYG 235 (365)
Q Consensus 172 ~------------~--~~~l~i~~~~~~d~G~Y~C~~~~~--~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~ 235 (365)
. . ..+|.|.++...|+|.|+|.|.|. .|... ..+.|.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~-~~~~l~V~------------------------ 292 (363)
T 1wio_A 238 VKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLH-QEVNLVVM------------------------ 292 (363)
T ss_dssp EEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEE-EEEEEEEE------------------------
T ss_pred ccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEE-EEEeEEEE------------------------
Confidence 1 1 338999999999999999999999 77433 55666665
Q ss_pred eecCceEEEEEEEeeeCCCc-eeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEE
Q psy3823 236 ALRNEQVLVSCTVDANPQAQ-YFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTF 314 (365)
Q Consensus 236 ~~~g~~~~l~C~~~~~p~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 314 (365)
...|+.+.|.|.+.+.|+|. .+.|+++|..... ...|.|.++..+|+|.|+|.|.|. |....+..+
T Consensus 293 ~v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~------------~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~ 359 (363)
T 1wio_A 293 RATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV------------SKREKAVWVLNPEAGMWQCLLSDS-GQVLLESNI 359 (363)
T ss_dssp EECCCSSSEEEEEESSCCTTCCEEEECSSSSCSE------------EESSSEEEESSCCSEEEEEEECSS-SSCCEEEEE
T ss_pred EecCCCeeEEEEEccccCCCccEEEEeCCCceee------------eeeeeeeeeccccceeEEEEEecC-CeEEEecce
Confidence 11288899999999987775 5999998864321 123677899999999999999965 556667777
Q ss_pred EEEc
Q psy3823 315 HVVK 318 (365)
Q Consensus 315 ~v~~ 318 (365)
+|.+
T Consensus 360 ~V~~ 363 (363)
T 1wio_A 360 KVLP 363 (363)
T ss_dssp EECC
T ss_pred EecC
Confidence 7753
No 57
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.95 E-value=1.2e-27 Score=221.89 Aligned_cols=266 Identities=12% Similarity=0.192 Sum_probs=171.4
Q ss_pred ecCCcEEEEEEeCC-CCCcceEEEEeCCCcCCCCCCce-e---EecCCe---EEEEEEccCCCCCCeEEEEEEEeCCCCC
Q psy3823 25 LRNEQVLVSCTVDA-NPQAQYFTWAFNNSGTAPRPLTS-Y---SIQDGS---TSVARYTPTSELEYGTLLCWARNEQGNQ 96 (365)
Q Consensus 25 ~~G~~~~l~C~~~~-~p~~~~v~W~~~~~~~l~~~~~~-~---~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~~~~~~~ 96 (365)
.+|+.+.|.|.+.+ .|.+..++|++++.. +...... . ...++. .+.|.|.+++.+|+|.|+|.|.|..+..
T Consensus 129 ~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 207 (438)
T 1qgc_4 129 LTSGGASVVCFLNNFYPKDINVKWKIDGSE-RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 207 (438)
T ss_dssp HHTTEEEEEEEEEEEBSSCEEEEEEETTEE-ECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred ccCCceEEEEEEccccCCCcEEEEEECCEE-cCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCC
Confidence 36889999999655 565448999999987 6544111 1 011222 4579999999999999999999987765
Q ss_pred cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecC--CCCeeEEEeC--CeEEee--------
Q psy3823 97 RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GITISN-------- 164 (365)
Q Consensus 97 ~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~l~~-------- 164 (365)
. +.+.+.. ..++.....+ ....+.+|+.++|.|.+.|.| .+. +.|+++ +..+..
T Consensus 208 ~--~~~~~~~-------~~~~~~~~~~----~~~~v~~G~~v~L~C~~~g~p~~~~~-v~W~k~~~g~~~~~~~~~~~~~ 273 (438)
T 1qgc_4 208 P--IVKSFNR-------NECEVMLVES----GGGLVKPGGSLKLSCTASGFIFNRCA-MSWVRQTPEKRLEWVATISSGG 273 (438)
T ss_dssp C--EEEEEET-------TC-CCEEEEE----CCEEECTTCCEEEEEEEESSCGGGSC-EEEEEEETTTEEEEEEEECTTS
T ss_pred c--eeccccc-------ccceeEEecC----CceEEecCCcEEEEEEEcccccCCcE-EEEEECCCCCCcEEEEEEeecC
Confidence 3 3333310 1122222222 234688999999999999887 445 999986 544421
Q ss_pred -------CCCCceEEe------eceEEEeeecCCCCeEEEEEEEcCCCC----CCcccEEEEEeeeeecccccCCCCcee
Q psy3823 165 -------NASAGRIIT------NQTLVLQSVTRHSGGLYACSAINSQGE----GGSTPFDLNINKMVNLIFNSIDEPVCK 227 (365)
Q Consensus 165 -------~~~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~~~~----~~s~~~~l~v~~~~~~~~~~~~~p~~~ 227 (365)
....+.... ...|.|.+++.+|+|.|+|.+.|..+. .......+.|.. ....+|.+.
T Consensus 274 ~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~------~~~~~P~v~ 347 (438)
T 1qgc_4 274 TYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSA------AKTTPPSVY 347 (438)
T ss_dssp CCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECS------SCCBCCEEE
T ss_pred CceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEec------CCCCCCeEE
Confidence 001122221 348999999999999999999985431 122345677661 000234443
Q ss_pred cCccceeeeecCceEEEEEEEeee-CCCceeEEEeCCCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEc
Q psy3823 228 QSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARN 303 (365)
Q Consensus 228 ~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n 303 (365)
...... .+..|+.++|.|.+.+. |.+..+.|+++|...... ........+. .+.|.|.++..+| |.|+|.|.|
T Consensus 348 ~~~~~~-~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~-~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n 424 (438)
T 1qgc_4 348 PLAPGS-AAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH-TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAH 424 (438)
T ss_dssp EECCCG-GGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEE-ECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEE
T ss_pred EcCccc-ccccCCcEEEEEEeccccCCCcEEEEecCCCCCcee-ecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEe
Confidence 222121 26689999999999987 777239999988643211 1111112232 3469999998889 999999999
Q ss_pred CCccceecEEE
Q psy3823 304 EQGSQRTPCTF 314 (365)
Q Consensus 304 ~~g~~~~~~~l 314 (365)
..|.......|
T Consensus 425 ~~g~~~~~~~i 435 (438)
T 1qgc_4 425 PASSTKVDKKI 435 (438)
T ss_dssp GGGTEEEEEEC
T ss_pred CCCCcceeeec
Confidence 99986554433
No 58
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.95 E-value=3.4e-26 Score=201.66 Aligned_cols=262 Identities=15% Similarity=0.167 Sum_probs=179.3
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCC-ceeE-ecCCeEEEEEEccCCCCCCeEEEEE
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPL-TSYS-IQDGSTSVARYTPTSELEYGTLLCW 88 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~-~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~ 88 (365)
+|.+.. .+....+.+|+.++|.|.+.+.|.+ .++|++++.. +.... .... ...+....|.|.+++.+|+|.|+|.
T Consensus 4 ~P~~~~-~p~~~~v~~G~~v~l~C~~~g~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 80 (305)
T 2nzi_A 4 APHFKE-ELRNLNVRYQSNATLVCKVTGHPKP-IVKWYRQGKE-IIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (305)
T ss_dssp CCEEEE-CCCCEEECTTCCEEEEEEEECSSCC-EEEEEETTEE-CCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEE
T ss_pred CCeeee-cccceEEeCCCcEEEEEEEeCCCCC-eEEEEECCEE-cccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEE
Confidence 455543 3456778999999999998888998 9999999988 55432 2222 2234456899999999999999999
Q ss_pred EEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcC-CccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCC
Q psy3823 89 ARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLG-RNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNAS 167 (365)
Q Consensus 89 a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~ 167 (365)
|.|..+.....+.|.| ..+|.+..... .......+.+|+.+.|.|.+.+.|.+. +.|++++..+.....
T Consensus 81 a~n~~g~~~~~~~l~V---------~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~~ 150 (305)
T 2nzi_A 81 ATNQGGSVSGTASLEV---------EVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPV-ITWQKGQDLIDNNGH 150 (305)
T ss_dssp EEETTEEEEEEEEEEE---------CEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCE-EEEEESSSBCCSSSS
T ss_pred EEcCCCCccceEEEEE---------ecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCE-EEEEECCEECCCCCc
Confidence 9999887777888888 44443221100 000223567899999999999998886 999999988765433
Q ss_pred CceEE--eeceEEEee-ecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecC------ccceee---
Q psy3823 168 AGRII--TNQTLVLQS-VTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQS------QQRIYG--- 235 (365)
Q Consensus 168 ~~~~~--~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~------~~~~~~--- 235 (365)
..... ....|.|.+ +...|+|.|+|.|.|..|... ..+.|.|. ..|..... ......
T Consensus 151 ~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~-~~~~l~v~----------~~P~~p~~~~~~~~~~~~v~l~w 219 (305)
T 2nzi_A 151 YQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQ-KTVELDVA----------DVPDPPRGVKVSDVSRDSVNLTW 219 (305)
T ss_dssp CEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEE-EEEEEEEE----------BCCCCCEEEEEESCCSSCEEEEE
T ss_pred EEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCcee-eEEEEEEe----------cCCCCCCCceeeeccCCEEEEEE
Confidence 22222 246899999 999999999999999998755 56777777 33321110 000000
Q ss_pred ---eecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceec
Q psy3823 236 ---ALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTP 311 (365)
Q Consensus 236 ---~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 311 (365)
...|....+.|.+...+.+. ..|...+.. ....|.|.++...+.|.|+|.|.|..|....+
T Consensus 220 ~~p~~~g~~~i~~y~v~~~~~~~-~~w~~~~~~--------------~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S 283 (305)
T 2nzi_A 220 TEPASDGGSKITNYIVEKCATTA-ERWLRVGQA--------------RETRYTVINLFGKTSYQFRVIAENKFGLSKPS 283 (305)
T ss_dssp ECCSCCSBSCEEEEEEEEEETTS-CCEEEEEEE--------------SSSEEEECSCCSSCEEEEEEEEEETTEECCCC
T ss_pred cCCccCCCCceeEEEEEEecCCC-CccEECccc--------------cCceEEecCCCCCCeEEEEEEEEeCCcccCCc
Confidence 11233344555555555554 556553221 12348899999999999999999999976544
No 59
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.94 E-value=2.2e-26 Score=206.69 Aligned_cols=277 Identities=14% Similarity=0.105 Sum_probs=165.7
Q ss_pred ceEEEEecCCcEEEEEEeCCC--CCcceEEEEeCC--CcCCC-----------------CCCceeEe--cCCeEEEEEEc
Q psy3823 19 QRIYGALRNEQVLVSCTVDAN--PQAQYFTWAFNN--SGTAP-----------------RPLTSYSI--QDGSTSVARYT 75 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~--p~~~~v~W~~~~--~~~l~-----------------~~~~~~~~--~~~~~~~l~i~ 75 (365)
+....+.+|+.++|.|.+.+. +.+ .+.|+|+. .. +. ...+.... .......|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~k~~~g~~-~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (344)
T 1za6_B 7 SGAEVVKPGASVKISCKASGYTFTDH-AIHWVKQNPGQR-LEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELS 84 (344)
T ss_dssp CCCEEECTTCCEEEEEEEESSCTTSS-CEEEEEECSSSC-EEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCCeEEeCCCcEEEEEEcCCcccccc-EEEEEEECCCCC-cEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEEC
Confidence 344678999999999996655 356 89999973 22 10 01111111 12345689999
Q ss_pred cCCCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeE
Q psy3823 76 PTSELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLI 154 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~ 154 (365)
+++.+|+|.|+|.+.+..+.......|.|.. .+..+|.+...... ..+.+|+.++|.|.+.|. |.+..+.
T Consensus 85 ~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~-----~~~~~P~i~~~~~~----~~~~~g~~v~L~C~~~g~~P~~~~v~ 155 (344)
T 1za6_B 85 SLRSEDTAVYFCTRSLNMAYWGQGTLVTVSS-----ASTKGPSVFPLAPS----SKSTSGGTAALGCLVKDYFPEPVTVS 155 (344)
T ss_dssp SCCGGGCEEEEEEETTTTCEECCCEEEEECS-----SCCBCCEEEEECCS----CTTTSSSEEEEEEEEEEEBSSCCCEE
T ss_pred CCCcccCEEEEEEEecCcceecCcEEEEEec-----CCCCCCeEEEcccc----ccccCCCcEEEEEEEeeEECCCeEEE
Confidence 9999999999999988543333567888831 01235655543322 245789999999999986 5433499
Q ss_pred EEeCCeEEeeC------CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCC-cccEEEEEee----------eeec-
Q psy3823 155 WTHNGITISNN------ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGG-STPFDLNINK----------MVNL- 216 (365)
Q Consensus 155 W~~~~~~l~~~------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-s~~~~l~v~~----------~~~~- 216 (365)
|+++|..+... ...+.......|.|.++..+| |.|+|.|.|..+... ...+.+.+.. ...+
T Consensus 156 W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~ 234 (344)
T 1za6_B 156 WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGG 234 (344)
T ss_dssp ETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC----------------
T ss_pred EecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCcccc
Confidence 99998753210 011111223478898888888 999999999876421 1111110000 0000
Q ss_pred -ccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeCCCCCCCCCC-ceeEeeCCCE---EEEEEcCCC
Q psy3823 217 -IFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNSDTAPRPL-TSYSIQDGST---SVARYTPTS 290 (365)
Q Consensus 217 -~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~~~-~~~~~~~~~~---s~l~i~~v~ 290 (365)
......+|.+........ ...|+.++|.|.+.|.+++ ..+.|+++|........ ......++.. +.|.|....
T Consensus 235 ~~~~~~~~P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~ 313 (344)
T 1za6_B 235 GSGGQPREPQVYTLPPSRD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSR 313 (344)
T ss_dssp ----CCBCCEEEEECCCGG-GGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHH
T ss_pred ccCCCCcCCEEEEeCCChH-hccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHH
Confidence 000114455443221111 2346669999999996443 24999999875432110 1111334432 446666666
Q ss_pred cccCeEEEEEEEcCCccc
Q psy3823 291 ELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 291 ~~d~G~Y~C~a~n~~g~~ 308 (365)
.+|+|.|+|.|.|.....
T Consensus 314 ~~~~g~YtC~a~~~~l~~ 331 (344)
T 1za6_B 314 WQQGNVFSCSVMHEALHN 331 (344)
T ss_dssp HHTTCEEEEEEECTTSTT
T ss_pred ccCCCeEEEEEEcCCCCC
Confidence 677999999999976543
No 60
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.94 E-value=1.2e-27 Score=237.34 Aligned_cols=270 Identities=17% Similarity=0.222 Sum_probs=61.3
Q ss_pred EEEEecCCcEEEEEEeCC--CCCcceEEEEeCCCcCCCCCCceeE--------ecCCeEEEEEEccCCCCCCeEEEEEEE
Q psy3823 21 IYGALRNEQVLVSCTVDA--NPQAQYFTWAFNNSGTAPRPLTSYS--------IQDGSTSVARYTPTSELEYGTLLCWAR 90 (365)
Q Consensus 21 ~~~v~~G~~~~l~C~~~~--~p~~~~v~W~~~~~~~l~~~~~~~~--------~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 90 (365)
...+.+|+.++|.|.+.+ .|.+ .+.|++++.. +........ ........|.|.+++.+|+|.|+|.+.
T Consensus 233 ~~~v~~G~~v~L~C~~~~~~~~~~-~~~W~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 310 (772)
T 3v2a_R 233 GIELSVGEKLVLNCTARTELNVGI-DFNWEYPSSK-HQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 310 (772)
T ss_dssp CEEEETTCCEEEEEEEEECTTCCC-EEEEECC---------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEE
T ss_pred ceEEecCCcEEEEEEEecCCCCce-eEEEecCCcc-CCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEE
Confidence 356889999999999655 4556 9999999887 544322211 112345689999999999999999999
Q ss_pred eCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCce
Q psy3823 91 NEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGR 170 (365)
Q Consensus 91 ~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~ 170 (365)
+..+.....+.|.| ..+|.+...+... ....+.+|+.+.|.|.+.++|.+. +.|+++|..+.... .
T Consensus 311 ~~~~~~~~~~~l~V---------~~~p~~~~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~~-v~W~~~g~~l~~~~---~ 376 (772)
T 3v2a_R 311 SGLMTKKNSTFVRV---------HEKPFVAFGSGME-SLVEATVGERVRIPAKYLGYPPPE-IKWYKNGIPLESNH---T 376 (772)
T ss_dssp CSSCEEEEEEEEEE---------ECCCC----------------------------------------------------
T ss_pred cCCcceeEEEEEEE---------eCCCeeEeccCCC-CcEEEcCCCcEEEEEEEeeeCCCe-EEEEECCEeCCCCc---e
Confidence 98877668888888 5566654433111 234678999999999999988887 99999998886421 1
Q ss_pred EEeeceEEEeeecCCCCeEEEEEEEcCCCCCC-cccEEEEEeeeeecccccCCCCceecCc--cceeeeecCceEEEEEE
Q psy3823 171 IITNQTLVLQSVTRHSGGLYACSAINSQGEGG-STPFDLNINKMVNLIFNSIDEPVCKQSQ--QRIYGALRNEQVLVSCT 247 (365)
Q Consensus 171 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-s~~~~l~v~~~~~~~~~~~~~p~~~~~~--~~~~~~~~g~~~~l~C~ 247 (365)
......|.|.++...|+|.|+|.+.|..|... +..+.|.|. .+|.+.... .....+..|+.+.|.|.
T Consensus 377 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~----------~~P~~~~~~~~~~~~~~~~g~~~~l~C~ 446 (772)
T 3v2a_R 377 IKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVY----------VPPQIGEKSLISPVDSYQYGTTQTLTCT 446 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EccceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEe----------cCCcccccccCCCccccCCCCcEEEEeE
Confidence 22457899999999999999999999987543 456677777 777664321 11112778999999999
Q ss_pred EeeeCCCceeEEEeCCCCCC------------------------------CC--CCceeE--eeCCCEEEEEEcCCCccc
Q psy3823 248 VDANPQAQYFTWAFNNSDTA------------------------------PR--PLTSYS--IQDGSTSVARYTPTSELE 293 (365)
Q Consensus 248 ~~~~p~~~~~~W~~~~~~~~------------------------------~~--~~~~~~--~~~~~~s~l~i~~v~~~d 293 (365)
+.+.|.|..+.|++++.... .. ...... ......+.|.|.++ +|
T Consensus 447 ~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d 524 (772)
T 3v2a_R 447 VYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NV 524 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--cc
Confidence 99998884499998643210 00 000000 11122356777776 78
Q ss_pred CeEEEEEEEcCCccceecEEEEEEc
Q psy3823 294 YGTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 294 ~G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
+|.|+|.|.|..|..+..+.|.|..
T Consensus 525 ~G~Y~C~a~N~~g~~~~~~~l~V~~ 549 (772)
T 3v2a_R 525 SALYKCEAVNKVGRGERVISFHVTR 549 (772)
T ss_dssp -------------------------
T ss_pred CeEEEEEEEccccccceeEEEEEEC
Confidence 9999999999999988888887764
No 61
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.94 E-value=1.8e-25 Score=207.74 Aligned_cols=277 Identities=12% Similarity=0.100 Sum_probs=171.8
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCc-CCC-----------------CCCceeEe--cCCeEEEEEEcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSG-TAP-----------------RPLTSYSI--QDGSTSVARYTP 76 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~-~l~-----------------~~~~~~~~--~~~~~~~l~i~~ 76 (365)
+....+.+|+.++|.|...+.+ .+ .+.|+|+... .+. ...+.... .......|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (444)
T 1igt_B 7 SGGGLVQPGGSLKLSCATSGFTFSDY-YMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSR 85 (444)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCeEEcCCCCEEEEEEcCCCccCCc-eEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECC
Confidence 3446789999999999966554 45 8999986421 010 00111111 123355899999
Q ss_pred CCCCCCeEEEEEEEeCCCCC---cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCe
Q psy3823 77 TSELEYGTLLCWARNEQGNQ---RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKK 152 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~~~~---~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~ 152 (365)
++.+|+|.|+|.+.+..+.. ...+.|.|... ...+|.+...... ..+.+|+.+.|.|.+.|. |.+..
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~-----~~~~P~i~~~~~~----~~~~~g~~v~L~C~~~g~~P~p~~ 156 (444)
T 1igt_B 86 LKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSA-----KTTAPSVYPLAPV----CGDTTGSSVTLGCLVKGYFPEPVT 156 (444)
T ss_dssp CCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSC-----CCBCCEEEEECCC----SSCCCSSCEEEEEEEEEEBSSCCE
T ss_pred CCHHHCEEEEEEEecCCcccccccCcEEEEecCC-----CCCCCceeEeccc----ccCCCCCcEEEEEEEcceeCCCcE
Confidence 99999999999999875441 24567777210 1234555433321 235789999999999985 66645
Q ss_pred eEEEeCCeEEeeC--CC---CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeee--------ecccc
Q psy3823 153 LIWTHNGITISNN--AS---AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMV--------NLIFN 219 (365)
Q Consensus 153 i~W~~~~~~l~~~--~~---~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~--------~~~~~ 219 (365)
+.|++++..+... .. .+.......|.|.++..+| |.|+|.|.|..+... ....+.+..+. .+...
T Consensus 157 v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~ 234 (444)
T 1igt_B 157 LTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK-VDKKIEPRGPTIKPCPPCKCPAPN 234 (444)
T ss_dssp EEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEE-EEEECCCCCCSCCCCCCCSCCCSC
T ss_pred EEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcc-eEEEeccCCCCcccCCccccCCcc
Confidence 9999988753110 00 0122224578899998889 999999999987532 11222110000 00000
Q ss_pred cCCCCceecCccceee-eecCceEEEEEEEeeeC---C-CceeEEEeCCCCCCCCCCc-eeEeeCC---CEEEEEEcCCC
Q psy3823 220 SIDEPVCKQSQQRIYG-ALRNEQVLVSCTVDANP---Q-AQYFTWAFNNSDTAPRPLT-SYSIQDG---STSVARYTPTS 290 (365)
Q Consensus 220 ~~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~~~p---~-~~~~~W~~~~~~~~~~~~~-~~~~~~~---~~s~l~i~~v~ 290 (365)
....|.+...+..... +..|+.+.|.|.+.|.+ + +. +.|+++|......... .....++ ..+.|.|.+++
T Consensus 235 ~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 313 (444)
T 1igt_B 235 LLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQ-ISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQD 313 (444)
T ss_dssp CCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCE-EEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHH
T ss_pred cCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeE-EEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHH
Confidence 0124544221211111 47899999999999984 3 45 9999998643322111 1112222 24579999999
Q ss_pred cccCeEEEEEEEcCCccc
Q psy3823 291 ELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 291 ~~d~G~Y~C~a~n~~g~~ 308 (365)
.+|+|.|+|.|.|..|..
T Consensus 314 ~~d~G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 314 WMSGKEFKCKVNNKDLPA 331 (444)
T ss_dssp HHTTCEEEEEEECTTCSS
T ss_pred hccCCcEEEEEEcCCCCC
Confidence 999999999999999876
No 62
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.94 E-value=2.2e-24 Score=202.14 Aligned_cols=283 Identities=14% Similarity=0.127 Sum_probs=170.7
Q ss_pred CceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCc-CCC-------C----------CCceeEec--CCeEEEEEEc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSG-TAP-------R----------PLTSYSIQ--DGSTSVARYT 75 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~-~l~-------~----------~~~~~~~~--~~~~~~l~i~ 75 (365)
++....+.+|+.++|.|...+.+ .. .+.|||.... .+. . ..+..... ......|.|.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (475)
T 1iga_A 7 QSGAEVKKPGASVKVSCKASGYSFTSY-GLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLS 85 (475)
T ss_pred cCCcEEEeCCCCEEEEEEecCCCCCCc-eEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEEC
Confidence 45667889999999999976554 45 8999996421 010 0 01111111 1334589999
Q ss_pred cCCCCCCeEEEEEEEeCCCC------CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-C
Q psy3823 76 PTSELEYGTLLCWARNEQGN------QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-P 148 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~~------~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p 148 (365)
+++.+|+|.|.|.+.+..+. ....+.|.|... +..+|.+..... ....+|+.++|.|.+.|. |
T Consensus 86 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~-----~~~~P~i~~~~~-----~~~~~g~~v~L~C~~~g~~P 155 (475)
T 1iga_A 86 SLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSA-----SPTSPKVFPLSL-----CSTQPDGNVVIACLVQGFFP 155 (475)
T ss_pred CCChhhCEEEEEEEeccCCCccceeeecCceEEEeccC-----CCcCCeEEecCc-----cccCCCCeEEEEEEEeeecC
Confidence 99999999999999987652 124567777310 012455443221 123689999999999986 4
Q ss_pred C-CCeeEEEeCCeEEeeCC-------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeec----
Q psy3823 149 P-YKKLIWTHNGITISNNA-------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNL---- 216 (365)
Q Consensus 149 ~-~~~i~W~~~~~~l~~~~-------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~---- 216 (365)
. +..|.|++++....... ..+.......|.|......|+|.|+|.+.|..+......+.+.|......
T Consensus 156 ~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~ 235 (475)
T 1iga_A 156 QEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPS 235 (475)
T ss_pred CCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCccccccc
Confidence 4 43599999875432110 01111123468888888899999999999988743333333333100000
Q ss_pred c----cccCCCCceecCccceeeeecCceEEEEEEEeeeCC---CceeEEEeCCCCCCCCCCc-eeEeeCC---CEEEEE
Q psy3823 217 I----FNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ---AQYFTWAFNNSDTAPRPLT-SYSIQDG---STSVAR 285 (365)
Q Consensus 217 ~----~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~~~~W~~~~~~~~~~~~~-~~~~~~~---~~s~l~ 285 (365)
. ......|.+.........+..|+.+.|.|.+.+.++ +. +.| ++......... .....++ ..+.|.
T Consensus 236 ~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~-i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~ 312 (475)
T 1iga_A 236 TPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVT-FTW--TPSSGKSAVQGPPERDLCGCYSVSSVLP 312 (475)
T ss_pred ccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceE-EEE--CCCCcCCccccCceECCCCCEEEEEEEE
Confidence 0 000013333222212122578999999999998754 45 999 44322211111 1111122 245699
Q ss_pred EcCCCcccCeEEEEEEEcCCccceecEEE
Q psy3823 286 YTPTSELEYGTLLCWARNEQGSQRTPCTF 314 (365)
Q Consensus 286 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 314 (365)
|.+++.+|+|.|+|.|.|..|.......|
T Consensus 313 I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v 341 (475)
T 1iga_A 313 GCAEPWNHGKTFTCTAAYPESKTPLTATL 341 (475)
T ss_pred EchHHhccCCcEEEEEEcCCCCCceEEEe
Confidence 99999999999999999999976443344
No 63
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.94 E-value=6.3e-26 Score=224.89 Aligned_cols=281 Identities=14% Similarity=0.138 Sum_probs=121.8
Q ss_pred EEeecccCCeEee--CCceEEEEecC--CcEEEEEEeCCCCCcceEEEEeC--CCcCCCCCCceeEecCCeEEEEEEccC
Q psy3823 4 LIFNSTDEPVCKQ--SQQRIYGALRN--EQVLVSCTVDANPQAQYFTWAFN--NSGTAPRPLTSYSIQDGSTSVARYTPT 77 (365)
Q Consensus 4 ~~~~~~~~p~~~~--~~~~~~~v~~G--~~~~l~C~~~~~p~~~~v~W~~~--~~~~l~~~~~~~~~~~~~~~~l~i~~~ 77 (365)
+.+.....|.... ..+..+.+.+| +.++|.|.+.+ |.+ .++|+++ +...+............ .|.|.++
T Consensus 116 v~v~~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~-p~~-~v~w~~~~~~~~~~~~~~~~~~~~~~---~l~i~~~ 190 (772)
T 3v2a_R 116 VYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI-SNL-NVSLCARYPEKRFVPDGNRISWDSKK---GFTIPSY 190 (772)
T ss_dssp ----------------CEEEEEEESSCCCEEEECCCCSC-SSC-CEEEEEETTTEEECCCSSSCEEETTT---EEEEEGG
T ss_pred EEECCCCCCceEcCcccceeEEEecCCCCeEEEEccCCC-CCc-EEEEEecCCCccccCCCceeecCCCC---CeEecCC
Confidence 3334344444433 34566778899 99999999754 777 9999997 55423333332333333 6999999
Q ss_pred CCCCCeEEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecC-CCCeeEE
Q psy3823 78 SELEYGTLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANP-PYKKLIW 155 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~~~i~W 155 (365)
+.+|.|.|+|.+.+...... ..+.+.+.. ..+|.+.+.+.. ...+.+|+.++|.|.+.+.+ +...+.|
T Consensus 191 ~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~-------~~~~~v~~~~~~---~~~v~~G~~v~L~C~~~~~~~~~~~~~W 260 (772)
T 3v2a_R 191 MISYAGMVFCEAKINDESYQSIMYIVVVVG-------YRIYDVVLSPSH---GIELSVGEKLVLNCTARTELNVGIDFNW 260 (772)
T ss_dssp GTTTCSEEEEEEEETTEEEECCEEEEEEEC-------CCEEEEEEECCS---CEEEETTCCEEEEEEEEECTTCCCEEEE
T ss_pred ChhhCeEEEEEEEECCceEEEEEEEEEEec-------CccceeeeCCCC---ceEEecCCcEEEEEEEecCCCCceeEEE
Confidence 99999999999997644333 224444411 123344454432 24688999999999999743 2335999
Q ss_pred EeCCeEEeeCCCC----------ceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCc
Q psy3823 156 THNGITISNNASA----------GRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPV 225 (365)
Q Consensus 156 ~~~~~~l~~~~~~----------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~ 225 (365)
++++..+...... ........|.|.+++.+|+|.|+|.+.|..+... ..+.|.|. .+|.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~-~~~~l~V~----------~~p~ 329 (772)
T 3v2a_R 261 EYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK-NSTFVRVH----------EKPF 329 (772)
T ss_dssp ECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEE-EEEEEEEE----------CCCC
T ss_pred ecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCccee-EEEEEEEe----------CCCe
Confidence 9988875432111 1223356899999999999999999998877543 67788888 7776
Q ss_pred eecCc--cceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEc
Q psy3823 226 CKQSQ--QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARN 303 (365)
Q Consensus 226 ~~~~~--~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n 303 (365)
+.... .....+..|+.+.|.|.+.+.|.+. +.|+++|..... ...+. ....|.|.++..+|+|.|+|.|.|
T Consensus 330 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~-v~W~~~g~~l~~---~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n 402 (772)
T 3v2a_R 330 VAFGSGMESLVEATVGERVRIPAKYLGYPPPE-IKWYKNGIPLES---NHTIK---AGHVLTIMEVSERDTGNYTVILTN 402 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEeccCCCCcEEEcCCCcEEEEEEEeeeCCCe-EEEEECCEeCCC---CceEc---cceeEEEecCChhcCceEEEEEEE
Confidence 54322 2233478999999999999999998 999998864432 11111 235699999999999999999999
Q ss_pred CCccce--ecEEEEEE
Q psy3823 304 EQGSQR--TPCTFHVV 317 (365)
Q Consensus 304 ~~g~~~--~~~~l~v~ 317 (365)
..|... ..+.|.|.
T Consensus 403 ~~g~~~~s~~~~l~v~ 418 (772)
T 3v2a_R 403 PISKEKQSHVVSLVVY 418 (772)
T ss_dssp ----------------
T ss_pred CCcCeEEEEEEEEEEe
Confidence 998654 34444443
No 64
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.93 E-value=2.1e-26 Score=204.92 Aligned_cols=259 Identities=12% Similarity=0.135 Sum_probs=161.4
Q ss_pred CcEEEEEEeCCC-C-CcceEEEEeCCCcCCCCCCce--eEecCC---eEEEEEEccCCCCCCeEEEEEEEeCCCCCcccE
Q psy3823 28 EQVLVSCTVDAN-P-QAQYFTWAFNNSGTAPRPLTS--YSIQDG---STSVARYTPTSELEYGTLLCWARNEQGNQRTPC 100 (365)
Q Consensus 28 ~~~~l~C~~~~~-p-~~~~v~W~~~~~~~l~~~~~~--~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~~ 100 (365)
+.++|.|.+.+. | .+ .|+|++++.. +...... ....++ ..+.|.|.+...+|.|.|+|.|.|..+.....+
T Consensus 25 ~~v~L~C~~~g~~P~~~-~v~W~k~g~~-l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 102 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTI-QITWLEDGQV-MDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDST 102 (323)
T ss_dssp SEEEEEEEEEEECCCCE-EEEEEETTEE-CCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEeCeECCCe-EEEEEECCEE-cccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceee
Confidence 699999996554 5 45 9999999987 6543221 111233 234688888888899999999998765432222
Q ss_pred EEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecC-CC--CeeEEEeCC-eEEeeCC------CCce
Q psy3823 101 TFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANP-PY--KKLIWTHNG-ITISNNA------SAGR 170 (365)
Q Consensus 101 ~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~--~~i~W~~~~-~~l~~~~------~~~~ 170 (365)
.+.+ . .....|.+.+.+. ....+.+|++++|.|.+.+.+ .+ ..|.|++++ ..+.... ..+.
T Consensus 103 ~~~~--~----~~~~~p~v~~~~p---~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~ 173 (323)
T 2wqr_A 103 KKCA--D----SNPRGVSAYLSRP---SPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGT 173 (323)
T ss_dssp CCCC--C----SSGGGCEEEECCC---CHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSC
T ss_pred ecCC--C----CCCCCCEEEEcCC---CHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCC
Confidence 1100 0 0022444444332 223577899999999999864 44 259999964 4432211 1111
Q ss_pred EEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee
Q psy3823 171 IITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA 250 (365)
Q Consensus 171 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~ 250 (365)
......|.|.++..+|+|.|+|.+.|..+.. ...+.+... .....+|.+........ ...|+.++|.|.+.+
T Consensus 174 ~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~---~~~~~v~~~----~~~~~~P~v~~~~~~~~-~~~g~~~~l~C~~~g 245 (323)
T 2wqr_A 174 LTVTSTLPVGTRDWIEGETYQCRVTHPHLPR---ALMRSTTKT----SGPRAAPEVYAFATPEW-PGSRDKRTLACLIQN 245 (323)
T ss_dssp EEEEEEEECCHHHHHTTCCEEEEEECTTSSS---CEEEEECCC----CSCCBCCEEEEEECCCC-TTCTTEEEEEEEEEE
T ss_pred EEEEEEEEECHHHccCCCCEEEEEECCCCCC---CeeeEEEcc----CCCCCCCEEEEeCCChH-HhcCCcEEEEEEeee
Confidence 1234579999999999999999999886422 234444300 00013455443221111 223999999999998
Q ss_pred eCC-CceeEEEeCCCCCCCCCCcee-----EeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 251 NPQ-AQYFTWAFNNSDTAPRPLTSY-----SIQDGS---TSVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 251 ~p~-~~~~~W~~~~~~~~~~~~~~~-----~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
.++ +..+.|+++|...... ... ...++. .+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 246 ~~p~~~~v~W~k~g~~l~~~--~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 246 FMPEDISVQWLHNEVQLPDA--RHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EBSSCCEEEEEETTEECCGG--GEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred eeCCCcEEEEEECCEECCCC--ceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 544 3249999998744321 111 112222 356999999999999999999999877
No 65
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.93 E-value=1.4e-24 Score=191.24 Aligned_cols=216 Identities=17% Similarity=0.203 Sum_probs=163.8
Q ss_pred CCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEe----eceEEEeeecCCCCeEEE
Q psy3823 116 KPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIIT----NQTLVLQSVTRHSGGLYA 191 (365)
Q Consensus 116 ~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~ 191 (365)
+|.+...+ .+..+.+|+++.|.|.+.+.|.+. +.|++++..+........... ...|.|.+++.+|+|.|+
T Consensus 4 ~P~~~~~p----~~~~v~~G~~v~l~C~~~g~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 78 (305)
T 2nzi_A 4 APHFKEEL----RNLNVRYQSNATLVCKVTGHPKPI-VKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQ 78 (305)
T ss_dssp CCEEEECC----CCEEECTTCCEEEEEEEECSSCCE-EEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEE
T ss_pred CCeeeecc----cceEEeCCCcEEEEEEEeCCCCCe-EEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEE
Confidence 56665544 345788999999999999988876 999999998865332222211 238999999999999999
Q ss_pred EEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCc----cceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCC
Q psy3823 192 CSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQ----QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTA 267 (365)
Q Consensus 192 C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~----~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~ 267 (365)
|.+.|..|... ..+.|.|. .+|.+..+. .....+..|+.+.|.|.+.+.|.+. +.|++++....
T Consensus 79 C~a~n~~g~~~-~~~~l~V~----------~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~~~~~~~~ 146 (305)
T 2nzi_A 79 VRATNQGGSVS-GTASLEVE----------VPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPV-ITWQKGQDLID 146 (305)
T ss_dssp EEEEETTEEEE-EEEEEEEC----------EEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCE-EEEEESSSBCC
T ss_pred EEEEcCCCCcc-ceEEEEEe----------cCCccCCCccccccccEEecCCCEEEEEEEECCCCCCE-EEEEECCEECC
Confidence 99999887643 66778877 444433211 1223378899999999999999998 99999887443
Q ss_pred CCCCceeEeeCCCEEEEEEcC-CCcccCeEEEEEEEcCCccceecEEEEEEcCcc-------------------------
Q psy3823 268 PRPLTSYSIQDGSTSVARYTP-TSELEYGTLLCWARNEQGSQRTPCTFHVVKAGE------------------------- 321 (365)
Q Consensus 268 ~~~~~~~~~~~~~~s~l~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~------------------------- 321 (365)
..........+....|.|.+ +..+|.|.|+|.|.|..|....++.|.|...+.
T Consensus 147 -~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~ 225 (305)
T 2nzi_A 147 -NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASD 225 (305)
T ss_dssp -SSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCC
T ss_pred -CCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccC
Confidence 23334444455567799999 999999999999999999998888888763221
Q ss_pred -------ccc------------------------cCccccEEEEEEEEEcCCCCCceee
Q psy3823 322 -------CEH------------------------PVAVSHRYVAKLYATNAKGAGPMVL 349 (365)
Q Consensus 322 -------c~~------------------------~l~~~~~~~~~~~~~n~~g~s~~~~ 349 (365)
|.+ +|.++..|.++|.|.|..|.|++..
T Consensus 226 g~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~ 284 (305)
T 2nzi_A 226 GGSKITNYIVEKCATTAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSE 284 (305)
T ss_dssp SBSCEEEEEEEEEETTSCCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEECCCCC
T ss_pred CCCceeEEEEEEecCCCCccEECccccCceEEecCCCCCCeEEEEEEEEeCCcccCCcC
Confidence 111 8999999999999999999887543
No 66
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.93 E-value=2.5e-25 Score=206.76 Aligned_cols=270 Identities=16% Similarity=0.199 Sum_probs=165.5
Q ss_pred EecCCcEEEEEEeCCC-CCcceEEEEeCCCcCCCCCCceeEecCC---eEEEEEEccCCCCCCeEEEEEEEeCCCCCccc
Q psy3823 24 ALRNEQVLVSCTVDAN-PQAQYFTWAFNNSGTAPRPLTSYSIQDG---STSVARYTPTSELEYGTLLCWARNEQGNQRTP 99 (365)
Q Consensus 24 v~~G~~~~l~C~~~~~-p~~~~v~W~~~~~~~l~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~ 99 (365)
+.+|+.++|.|.+.+. |.+..++|++++.. +...........+ ..+.|.|.++..+| |.|+|.|.|..+.....
T Consensus 135 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~-~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~ 212 (444)
T 1igt_B 135 DTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS-SGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD 212 (444)
T ss_dssp CCCSSCEEEEEEEEEEBSSCCEEEEGGGTBC-TTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEE
T ss_pred CCCCCcEEEEEEEcceeCCCcEEEEecCCCC-CCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceE
Confidence 3689999999996554 65449999999875 4211000000111 22468999999989 99999999988765333
Q ss_pred EEEEEEecc-------ccC--CCCCCCeEEEEcCCccCccc-eecCCcEEEEEEEEecC---CCCeeEEEeCCeEEeeCC
Q psy3823 100 CTFHVVKAG-------ECE--HPVDKPSVQIKLGRNLNASV-LNEGVDIYFDCHIQANP---PYKKLIWTHNGITISNNA 166 (365)
Q Consensus 100 ~~l~V~~~~-------~~~--~~~~~p~~~~~~~~~~~~~~-~~~g~~v~l~C~~~~~p---~~~~i~W~~~~~~l~~~~ 166 (365)
..+.+.... .+. ....+|.+.+.+.. ... +.+|++++|.|.+.|.+ +...+.|++++..+....
T Consensus 213 ~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~---~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~ 289 (444)
T 1igt_B 213 KKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPK---IKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQ 289 (444)
T ss_dssp EECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCC---HHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTT
T ss_pred EEeccCCCCcccCCccccCCcccCCCceEEecCCc---hhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcc
Confidence 332210000 000 00225665444432 112 57899999999999874 434599999998875322
Q ss_pred CCc-------eEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecC
Q psy3823 167 SAG-------RIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRN 239 (365)
Q Consensus 167 ~~~-------~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g 239 (365)
... .....+.|.|.++..+|+|.|+|.|.|..+... ....+... .....+|.+.........+..|
T Consensus 290 ~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~-~~~~v~~~------~~~~~~P~v~~~~~~~~~~~~~ 362 (444)
T 1igt_B 290 TQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAP-IERTISKP------KGSVRAPQVYVLPPPEEEMTKK 362 (444)
T ss_dssp CBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSC-EEEEEECC------CCCCBCCEEEEECCCGGGTTSS
T ss_pred cccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCc-eEEEEecc------CCCCCCCEEEEeCCChHHccCC
Confidence 111 112345899999999999999999999887652 12222110 0111566654322221113444
Q ss_pred ceEEEEEEEeee-CCCceeEEEeCCCCCCCCCCcee--EeeCCCE---EEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 240 EQVLVSCTVDAN-PQAQYFTWAFNNSDTAPRPLTSY--SIQDGST---SVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 240 ~~~~l~C~~~~~-p~~~~~~W~~~~~~~~~~~~~~~--~~~~~~~---s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
.++|.|.+.|. |++..+.|+++|.... ...... ...++.. +.|.|.....+|.|.|+|.|.|..-.
T Consensus 363 -~~~L~C~~~g~~P~~~~v~W~k~g~~l~-~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l~ 434 (444)
T 1igt_B 363 -QVTLTCMVTDFMPEDIYVEWTNNGKTEL-NYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLH 434 (444)
T ss_dssp -EEEEEEEEEEEBSSCCEEEEEETTEECS-SEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTSG
T ss_pred -eEEEEEEEEeeeCCCCEEEEEECCEEcc-ccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCcC
Confidence 59999999985 5552499999987442 111111 1234432 45667776677899999999997643
No 67
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.93 E-value=1.3e-23 Score=183.10 Aligned_cols=190 Identities=19% Similarity=0.314 Sum_probs=149.7
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEe--eceEEEeeecCCCCeEEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIIT--NQTLVLQSVTRHSGGLYA 191 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~ 191 (365)
..+|.+...+ ....+.+|+.++|.|.+.+.|.+. +.|++++..+........... ...|.|.+++..|+|.|+
T Consensus 3 ~~pP~~~~~p----~~~~~~~G~~v~l~C~~~g~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 77 (284)
T 2rik_A 3 MAPPFFDLKP----VSVDLALGESGTFKCHVTGTAPIK-ITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYT 77 (284)
T ss_dssp CCCCEEEECC----CCEEEETTCCEEEEEEEESSSCCE-EEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred cCCCEEEccc----cceEecCCCcEEEEEEEEcCCCCE-EEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEE
Confidence 4577776665 335688999999999999888776 999999998865433222222 568999999999999999
Q ss_pred EEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCC
Q psy3823 192 CSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPL 271 (365)
Q Consensus 192 C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~ 271 (365)
|.+.|..|... ..+.|.|. .+|.+.........+..|+.+.|.|.+.+.|.+. +.|++++..... ..
T Consensus 78 C~~~n~~g~~~-~~~~l~V~----------~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~-v~W~~~~~~~~~-~~ 144 (284)
T 2rik_A 78 CYASNVAGKDS-CSAQLGVQ----------EPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIK-VLWYKDETEIQE-SS 144 (284)
T ss_dssp EEEEETTEEEE-EEEEEEEE----------CCCEEEECCCSEEEEETTCCEEEEEEEESSSCCE-EEEEETTEECCC-SS
T ss_pred EEEEECCceEE-EEEEEEcc----------CCCcccccCCCceEecCCceEEEEEEEeeeCCCE-EEEEECCEECcC-CC
Confidence 99999887643 67888888 7887765544444488999999999999999998 999999874432 23
Q ss_pred ceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCcc
Q psy3823 272 TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAGE 321 (365)
Q Consensus 272 ~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~ 321 (365)
............|.|.+++.+|+|.|+|.|.|..|.....+.|.|..++.
T Consensus 145 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 194 (284)
T 2rik_A 145 KFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPV 194 (284)
T ss_dssp SEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCB
T ss_pred cEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCc
Confidence 33444445567899999999999999999999999998888998876544
No 68
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.93 E-value=8.2e-24 Score=192.87 Aligned_cols=205 Identities=20% Similarity=0.368 Sum_probs=159.5
Q ss_pred ccceecCCcEEEEEEEEecCCCCeeEEEeC--CeEEeeCC---CCceEE----eeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 129 ASVLNEGVDIYFDCHIQANPPYKKLIWTHN--GITISNNA---SAGRII----TNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 129 ~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~--~~~l~~~~---~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
+..+.+|+++.|.|.+.|.|.+. +.|+++ |..+.... ..+... ....|.|.+++.+|+|.|+|.|.|..|
T Consensus 9 ~~~~~~G~~v~l~C~~~g~p~p~-v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 87 (389)
T 2jll_A 9 NETTYENGQVTLVCDAEGEPIPE-ITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIG 87 (389)
T ss_dssp CEEEETTSEEEEEEEEECSSCCE-EEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSC
T ss_pred ceEEeCCCeEEEEEEeecccCCe-EEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCC
Confidence 34678899999999999988887 999999 88886421 112222 256899999999999999999999988
Q ss_pred CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCC-CceeEeeC
Q psy3823 200 EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRP-LTSYSIQD 278 (365)
Q Consensus 200 ~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~-~~~~~~~~ 278 (365)
... ..+.|.|. .+|.+..... ...+..|+.+.|.|.+.+.|.+. +.|+++|....... .......+
T Consensus 88 ~~~-~~~~l~V~----------~~P~~~~~~~-~~~~~~g~~~~l~C~~~g~p~~~-i~W~~~g~~l~~~~~~~~~~~~~ 154 (389)
T 2jll_A 88 GHQ-KSMYLDIE----------YAPKFISNQT-IYYSWEGNPINISCDVKSNPPAS-IHWRRDKLVLPAKNTTNLKTYST 154 (389)
T ss_dssp EEE-EEEEEEEE----------EEEEECCSCC-EEEECTTCCEEEEECEEEESCCE-EEEEETTEESSCTTCTTEEEEEC
T ss_pred Ccc-eEEEEEEE----------eCCEEecCcc-eEEeccCCEEEEEEEEEecCCCe-EEEEECCccCCcccCceEEEecc
Confidence 654 67889998 7777655432 23378999999999999999998 99999986543322 23444556
Q ss_pred CCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCcc------------------cc--------------c--
Q psy3823 279 GSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAGE------------------CE--------------H-- 324 (365)
Q Consensus 279 ~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~------------------c~--------------~-- 324 (365)
+..+.|.|.++..+|+|.|+|.|.|..|.....+.+.+...+. |. +
T Consensus 155 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~ 234 (389)
T 2jll_A 155 GRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDV 234 (389)
T ss_dssp SSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEE
T ss_pred CCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEE
Confidence 6677899999999999999999999999887766665532111 11 0
Q ss_pred -----------------------cCccccEEEEEEEEEcCCCCCce
Q psy3823 325 -----------------------PVAVSHRYVAKLYATNAKGAGPM 347 (365)
Q Consensus 325 -----------------------~l~~~~~~~~~~~~~n~~g~s~~ 347 (365)
+|.++..|.++|.|.|..|.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~ 280 (389)
T 2jll_A 235 KEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDY 280 (389)
T ss_dssp EETTCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCC
T ss_pred EECCCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCC
Confidence 89999999999999999997764
No 69
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.92 E-value=8.6e-25 Score=203.88 Aligned_cols=276 Identities=12% Similarity=0.105 Sum_probs=162.4
Q ss_pred eEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-CC-------C----------CCceeEe--cCCeEEEEEEccC
Q psy3823 20 RIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-AP-------R----------PLTSYSI--QDGSTSVARYTPT 77 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l~-------~----------~~~~~~~--~~~~~~~l~i~~~ 77 (365)
....+.+|+.++|.|...+.| .+ .+.|+|..... .. . ..+.... .......|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (457)
T 1hzh_H 8 GAEVKKPGASVKVSCQASGYRFSNF-VIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL 86 (457)
T ss_dssp CCEEECTTCCEEECEEEESSCGGGS-CEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CceEEcCCCCEEEEEEecCccccCc-EEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCC
Confidence 346789999999999976665 56 89999853210 10 0 1111111 1234568999999
Q ss_pred CCCCCeEEEEEEEeCCC------------CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEE
Q psy3823 78 SELEYGTLLCWARNEQG------------NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQ 145 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~------------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~ 145 (365)
+.+|+|.|+|.+.+..+ .......|.|.. .+..+|.+..... ...+.+|+.++|.|.+.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~P~i~~~~~----~~~~~~g~~v~L~C~~~ 157 (457)
T 1hzh_H 87 RSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSS-----ASTKGPSVFPLAP----SSKSTSGGTAALGCLVK 157 (457)
T ss_dssp CGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECS-----CCCBCCEEEEECC----CSCCCTTCCEEEEEEEE
T ss_pred CcccCEEEEEEEecCCccccccccccccceECCcEEEEecC-----CCCCCCeEEecCc----cccccCCCcEEEEEEEe
Confidence 99999999999998765 122456777721 0112565554332 22467899999999999
Q ss_pred ec-CCCCeeEEEeCCeEEeeC------CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeee---
Q psy3823 146 AN-PPYKKLIWTHNGITISNN------ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVN--- 215 (365)
Q Consensus 146 ~~-p~~~~i~W~~~~~~l~~~------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~--- 215 (365)
+. |.+..+.|++++..+... ...+.......|.|.++..+| |.|+|.+.|..+... ....+.+.....
T Consensus 158 g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~-~~~~v~~~~~~~~~~ 235 (457)
T 1hzh_H 158 DYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK-VDKKAEPKSCDKTHT 235 (457)
T ss_dssp SBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEE-EEEECCCCCSCSSCS
T ss_pred EEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcc-eeEEecccCCCcccc
Confidence 86 543459999988543110 011111223479999999999 999999999765422 112222110000
Q ss_pred ----cccccCCCCce-ecCccceeeeecCceEEEEEEEeeeCCC----ceeEEEeCCCCCCCCCCcee-EeeCCCEEEEE
Q psy3823 216 ----LIFNSIDEPVC-KQSQQRIYGALRNEQVLVSCTVDANPQA----QYFTWAFNNSDTAPRPLTSY-SIQDGSTSVAR 285 (365)
Q Consensus 216 ----~~~~~~~~p~~-~~~~~~~~~~~~g~~~~l~C~~~~~p~~----~~~~W~~~~~~~~~~~~~~~-~~~~~~~s~l~ 285 (365)
+......+|.+ ...+.....+..|+.+.|.|.+.+.|++ . +.|++++........... ...++......
T Consensus 236 ~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~-i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~ 314 (457)
T 1hzh_H 236 CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVK-FNWYVDGVEVHNAKTKPREEQYNSTYRVVS 314 (457)
T ss_dssp CCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCE-EEEEETTEEECCCEEEEEEECTTSCEEEEE
T ss_pred cCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceE-EEEEeCCccccccccccceecCCCcEEEEE
Confidence 00000023443 2222111115679999999999987654 5 999999864322111111 12233322111
Q ss_pred EcCCCccc---CeEEEEEEEcCCccc
Q psy3823 286 YTPTSELE---YGTLLCWARNEQGSQ 308 (365)
Q Consensus 286 i~~v~~~d---~G~Y~C~a~n~~g~~ 308 (365)
...+...| +|.|+|.|.|..+..
T Consensus 315 ~l~i~~~d~~d~G~Y~C~a~n~~~~~ 340 (457)
T 1hzh_H 315 VLTVLHQDWLNGKEYKCKVSNKALPA 340 (457)
T ss_dssp EECCCHHHHHHTCCEEEEEECTTSSS
T ss_pred EEEECHHHccCCCcEEEEEeCCCCCC
Confidence 22234455 999999999876654
No 70
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.92 E-value=2.5e-23 Score=173.49 Aligned_cols=191 Identities=21% Similarity=0.321 Sum_probs=140.5
Q ss_pred CCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEe----eceEEEeeecC-CCCeE
Q psy3823 115 DKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIIT----NQTLVLQSVTR-HSGGL 189 (365)
Q Consensus 115 ~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~----~~~l~i~~~~~-~d~G~ 189 (365)
.+|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+........... ...|.|.+++. .|+|.
T Consensus 5 ~pP~~~~~p----~~~~v~~G~~v~l~C~~~g~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~ 79 (212)
T 2yd1_A 5 HPPEIIRKP----QNQGVRVGGVASFYCAARGDPPPS-IVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAP 79 (212)
T ss_dssp CCCEEEECC----CCEEEETTSCEEEEEEEECSSCCE-EEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSE
T ss_pred CCCEEEcCC----CceEEecCCEEEEEEEEccCCCCe-EEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCce
Confidence 467766655 335788999999999999988876 999999998863332222221 25899999999 99999
Q ss_pred EEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCC
Q psy3823 190 YACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPR 269 (365)
Q Consensus 190 Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~ 269 (365)
|+|.+.|..|...+..+.|.|..... .....|.+...+.. ..+..|+.+.|.|.+.+.|.+. +.|++++......
T Consensus 80 Y~C~~~n~~g~~~~~~~~l~V~~~~~---~~~~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~-i~W~~~~~~~~~~ 154 (212)
T 2yd1_A 80 YECVAENGVGDAVSADATLTIYEGDK---TPAGFPVITQGPGT-RVIEVGHTVLMTCKAIGNPTPN-IYWIKNQTKVDMS 154 (212)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTC---SCTTCCEEEECCCC-EEEETTCCEEECCEEECSSCCE-EEEEETTEECCTT
T ss_pred EEEEEEeCCCCeEEeeEEEEEecccC---CCCCCCeeEeCCCc-eEeecCCeEEEEEEeccCCCCe-EEEEECCeEcccC
Confidence 99999999887455678888871100 00011555444333 3378899999999999999998 9999998755433
Q ss_pred CCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceec-EEEEEEcC
Q psy3823 270 PLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTP-CTFHVVKA 319 (365)
Q Consensus 270 ~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~ 319 (365)
...... .++ .|.|.+++.+|+|.|+|.|.|..|..... +.|.|..+
T Consensus 155 ~~~~~~-~~~---~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 155 NPRYSL-KDG---FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVR 201 (212)
T ss_dssp STTEEE-ETT---EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred CCeEEc-cCC---eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEec
Confidence 333322 233 59999999999999999999999998754 78888755
No 71
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.92 E-value=1.1e-23 Score=175.57 Aligned_cols=190 Identities=18% Similarity=0.318 Sum_probs=143.9
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCC-CCcee-EecCCeEEEEEEccCCC-CCCeEEEE
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPR-PLTSY-SIQDGSTSVARYTPTSE-LEYGTLLC 87 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~-~~~~~-~~~~~~~~~l~i~~~~~-~d~G~Y~C 87 (365)
+|.+.. .+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +.. ..... .........|.|.+++. +|+|.|+|
T Consensus 6 pP~~~~-~p~~~~v~~G~~v~l~C~~~g~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 6 PPEIIR-KPQNQGVRVGGVASFYCAARGDPPP-SIVWRKNGKK-VSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp CCEEEE-CCCCEEEETTSCEEEEEEEECSSCC-EEEEEETTEE-CCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEE
T ss_pred CCEEEc-CCCceEEecCCEEEEEEEEccCCCC-eEEEEECCEE-CCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEE
Confidence 454443 4555678999999999998889999 9999999988 652 22222 22233446899999999 99999999
Q ss_pred EEEeCCCC-CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCC
Q psy3823 88 WARNEQGN-QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNA 166 (365)
Q Consensus 88 ~a~~~~~~-~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~ 166 (365)
.+.+..+. ....+.|.|..... .+...|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+....
T Consensus 83 ~~~n~~g~~~~~~~~l~V~~~~~--~~~~~p~~~~~~----~~~~~~~g~~v~l~C~~~g~p~p~-i~W~~~~~~~~~~~ 155 (212)
T 2yd1_A 83 VAENGVGDAVSADATLTIYEGDK--TPAGFPVITQGP----GTRVIEVGHTVLMTCKAIGNPTPN-IYWIKNQTKVDMSN 155 (212)
T ss_dssp EEECSSSCEEEEEEEEEEECTTC--SCTTCCEEEECC----CCEEEETTCCEEECCEEECSSCCE-EEEEETTEECCTTS
T ss_pred EEEeCCCCeEEeeEEEEEecccC--CCCCCCeeEeCC----CceEeecCCeEEEEEEeccCCCCe-EEEEECCeEcccCC
Confidence 99998887 55778888842211 011225555443 234678899999999999988887 99999999887533
Q ss_pred CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 167 SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 167 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
. .....++.|.|.++...|+|.|+|.|.|..|...+..+.|.|.
T Consensus 156 ~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~ 199 (212)
T 2yd1_A 156 P-RYSLKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK 199 (212)
T ss_dssp T-TEEEETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred C-eEEccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEE
Confidence 2 3455567999999999999999999999999876566788888
No 72
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.92 E-value=1.9e-23 Score=171.79 Aligned_cols=178 Identities=16% Similarity=0.255 Sum_probs=136.9
Q ss_pred CCeEEEEcCCccCccceecCCcEEEEEEEE-ecCCCCeeEEEeCCeEEeeCCCCceEEe-----------eceEEEeeec
Q psy3823 116 KPSVQIKLGRNLNASVLNEGVDIYFDCHIQ-ANPPYKKLIWTHNGITISNNASAGRIIT-----------NQTLVLQSVT 183 (365)
Q Consensus 116 ~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~i~W~~~~~~l~~~~~~~~~~~-----------~~~l~i~~~~ 183 (365)
+|.+...+ .+..+.+|+++.|.|.+. +.|.+. +.|+++|..+........... ...|.|.+++
T Consensus 2 ~~~~~~~p----~~~~v~~G~~v~l~C~~~~~~p~~~-v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 76 (195)
T 2c5d_C 2 ESPFVGNP----GNITGARGLTGTLRCQLQVQGEPPE-VHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQ 76 (195)
T ss_dssp CCSEEECC----CCEEECTTCCEEEEEEEEEESSCCC-CEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCC
T ss_pred CCeeccCh----hheEEecCCcEEEecccccCCCCcE-EEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEecc
Confidence 34444444 335688999999999999 888777 999999998865321111111 4689999999
Q ss_pred CCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeC
Q psy3823 184 RHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFN 262 (365)
Q Consensus 184 ~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~ 262 (365)
..|+|.|+|.+.+..+...+..+.|.|. .+|.+...+.. ..+..|+.+.|.|.+.+.|.| . +.|+++
T Consensus 77 ~~d~G~Y~C~~~~~~~~~~~~~~~l~V~----------~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~~-v~W~~~ 144 (195)
T 2c5d_C 77 LSDTGQYQCLVFLGHQTFVSQPGYVGLE----------GLPYFLEEPED-RTVAANTPFNLSCQAQGPPEPVD-LLWLQD 144 (195)
T ss_dssp STTCEEEEEEEEETTEEEECCCEEEEEC----------CSCEEEECCCC-EEECTTCCEEEEEEEECSSCCCE-EEEEES
T ss_pred ccCCcEEEEEEEeCCCceecccEEEEEe----------cCCeEEcCCCc-EEEcCCCEEEEEeECCCCCCCCE-EEEEEC
Confidence 9999999999999877655566889998 88877654443 338889999999999999999 7 999999
Q ss_pred CCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccce-ecEEEEEEc
Q psy3823 263 NSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQR-TPCTFHVVK 318 (365)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~ 318 (365)
+......... .....|.|.+++ |+|.|+|.|.|..|... ..+.|.|.|
T Consensus 145 ~~~~~~~~~~------~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V~P 193 (195)
T 2c5d_C 145 AVPLATAPGH------GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITVLP 193 (195)
T ss_dssp SCBSSSSTTS------SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred CEeccCCCCc------CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEEec
Confidence 8754332211 234569999986 89999999999999985 799998843
No 73
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.92 E-value=8.6e-26 Score=209.26 Aligned_cols=276 Identities=12% Similarity=0.100 Sum_probs=168.9
Q ss_pred eEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCc-CCC-------C----------CCceeEec--CCeEEEEEEccC
Q psy3823 20 RIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSG-TAP-------R----------PLTSYSIQ--DGSTSVARYTPT 77 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~-~l~-------~----------~~~~~~~~--~~~~~~l~i~~~ 77 (365)
....+.+|+.++|.|.+.+.+ .+ .+.|+|++.. .+. . ..+..... .+....|.|.++
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (434)
T 1igy_B 7 GAELARPGASVKMSCKASGYTFTTY-TIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSL 85 (434)
T ss_dssp CCCEECTBCCEEECCEECSSCGGGC-CCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSB
T ss_pred CCeEecCCCCEEEEEEccCCcccCc-eEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCC
Confidence 445689999999999977654 55 8999997421 010 0 01111111 122347999999
Q ss_pred CCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEE
Q psy3823 78 SELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWT 156 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~ 156 (365)
+.+|+|.|+|.+.+..+.......|.|... +..+|.+...... ..+.+|+.++|.|.+.|. |.+..+.|+
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~-----~~~~P~i~~~~~~----~~~~~G~~v~L~C~~~g~~P~p~~v~W~ 156 (434)
T 1igy_B 86 TSDDSAVYYCVREGEVPYWGQGTTVTVSSA-----KTTPPSVYPLAPG----SAAQTNSMVTLGCLVKGYFPEPVTVTWN 156 (434)
T ss_dssp CGGGCSEECCCCSSSSCCCCCCEECEECCS-----CCBCCCEEEECCC----CCCCCTTEEEEEEEEEEEBSSCCEEEET
T ss_pred ChHHCEEEEEEEEccccccCCceEEEEccC-----CCCCCeEEEcCCc----cccCCCCcEEEEEEEeeecCCCeEEEEe
Confidence 999999999999885444445677887310 0134555443321 235789999999999986 665459999
Q ss_pred eCCeEEeeCC-----CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccc--cCCCCceecC
Q psy3823 157 HNGITISNNA-----SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFN--SIDEPVCKQS 229 (365)
Q Consensus 157 ~~~~~l~~~~-----~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~--~~~~p~~~~~ 229 (365)
+++..+.... ..+.......|.|.++..+| |.|+|.|.|..+... ....+.+....-.+.. ....|.+...
T Consensus 157 k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~-~~~~~~~~~~~~~v~~~~~~~~p~v~~~ 234 (434)
T 1igy_B 157 SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTK-VDKKIVPRDCGCKPCICTVPEVSSVFIF 234 (434)
T ss_dssp TTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCC-EEEECCCCCCCCCCCCCCCSSSCCEEEE
T ss_pred eCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCcc-ceeeccCCCCCCccccCCCCcCcEEEEe
Confidence 9887531100 00112224578898888888 999999999987643 2222221100000000 0000333221
Q ss_pred cccee-eeecCceEEEEEEEeeeC----CCceeEEEeCCCCCCCCCCce-eEeeCC---CEEEEEEcCCCcccCeEEEEE
Q psy3823 230 QQRIY-GALRNEQVLVSCTVDANP----QAQYFTWAFNNSDTAPRPLTS-YSIQDG---STSVARYTPTSELEYGTLLCW 300 (365)
Q Consensus 230 ~~~~~-~~~~g~~~~l~C~~~~~p----~~~~~~W~~~~~~~~~~~~~~-~~~~~~---~~s~l~i~~v~~~d~G~Y~C~ 300 (365)
+.... .+..|+.+.|.|.+.+.+ .+. +.|++++.......... ....++ ..+.|.|.++..+|+|.|+|.
T Consensus 235 ~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~-i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 313 (434)
T 1igy_B 235 PPKPKDTLLITVTPKVTCVVVDISKDDPEVQ-FSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCR 313 (434)
T ss_dssp CCCHHHHHSTTSCCEEEEEECCCCSSCCCCC-BCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCC
T ss_pred CCChHHhcccCCCcEEEEEEeccccCCCCeE-EEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEE
Confidence 11111 167899999999999874 245 99999886432211100 001111 234699999999999999999
Q ss_pred EEcCCccc
Q psy3823 301 ARNEQGSQ 308 (365)
Q Consensus 301 a~n~~g~~ 308 (365)
|.|..|..
T Consensus 314 a~n~~~~~ 321 (434)
T 1igy_B 314 VNSAAFPA 321 (434)
T ss_dssp BCCSSCSS
T ss_pred EECCCCCC
Confidence 99999865
No 74
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.92 E-value=1.5e-23 Score=172.51 Aligned_cols=184 Identities=18% Similarity=0.240 Sum_probs=140.2
Q ss_pred CCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEe--e--ceEEEeeecCCCCeEEE
Q psy3823 116 KPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIIT--N--QTLVLQSVTRHSGGLYA 191 (365)
Q Consensus 116 ~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~--~--~~l~i~~~~~~d~G~Y~ 191 (365)
+|.+...+ ....+.+|+++.|.|.+.+.|.+. +.|++++..+........... + ..|.|.+++..|+|.|+
T Consensus 4 ~P~~~~~~----~~~~v~~G~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 78 (197)
T 2j8h_A 4 APHFKEEL----RNLNVRYQSNATLVCKVTGHPKPI-VKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQ 78 (197)
T ss_dssp CCEEEECC----CCEEEETTSCEEEEEEEECSSCCE-EEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEE
T ss_pred CCEEEEcC----CccEEcCCCEEEEEEEEeecCCCE-EEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEE
Confidence 56655444 335788999999999999988777 999999998875332222221 2 28999999999999999
Q ss_pred EEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCc----cceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCC
Q psy3823 192 CSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQ----QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTA 267 (365)
Q Consensus 192 C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~----~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~ 267 (365)
|.+.|..+... ..+.|.|. .+|.+..+. .....+..|+.+.|.|.+.+.|.+. +.|++++....
T Consensus 79 C~~~n~~g~~~-~~~~l~V~----------~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~~~~~~~~ 146 (197)
T 2j8h_A 79 VRATNQGGSVS-GTASLEVE----------VPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPV-ITWQKGQDLID 146 (197)
T ss_dssp EEEEETTEEEE-EEEEEEEE----------EEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCE-EEEEESSCEEC
T ss_pred EEEEECCCcee-EEEEEEEc----------CCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCc-EEEEECCEEee
Confidence 99999877643 66777777 444332211 1233478899999999999999998 99999887443
Q ss_pred CCCCceeEeeCCCEEEEEEcC-CCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 268 PRPLTSYSIQDGSTSVARYTP-TSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 268 ~~~~~~~~~~~~~~s~l~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
..........+....|.|.+ +..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 147 -~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 147 -NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp -SSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred -cCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 33344444555667899999 99999999999999999999888888875
No 75
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.92 E-value=8.4e-24 Score=176.40 Aligned_cols=192 Identities=18% Similarity=0.305 Sum_probs=142.7
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeE-ecCCeEEEEEEccC-CCCCCeEEEE
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYS-IQDGSTSVARYTPT-SELEYGTLLC 87 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~-~~~~~~~~l~i~~~-~~~d~G~Y~C 87 (365)
.+|.+.. .+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +........ ..++....|.|.++ +.+|+|.|+|
T Consensus 5 ~~P~~~~-~p~~~~v~~G~~v~L~C~~~g~p~~-~v~W~k~~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 5 TPPRFTR-TPVDQTGVSGGVASFICQATGDPRP-KIVWNKKGKK-VSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp EEEEEEE-CCCCEEEETTSCEEEEEEEEEESCC-EEEEEETTEE-CCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEE
T ss_pred CCCeEEe-CcceeEEecCCeEEEEEEEeeCCCC-EEEEEECCcC-CCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEE
Confidence 3454443 3455678999999999998788999 9999999988 665443322 23345568999999 5999999999
Q ss_pred EEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCC
Q psy3823 88 WARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNAS 167 (365)
Q Consensus 88 ~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~ 167 (365)
.+.+..+.....+.|.|..... .+...|.+...+ ....+.+|+.+.|.|.+.|.|.+. +.|++++..+.....
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~--~~~~~p~~~~~~----~~~~~~~g~~v~l~C~~~g~p~p~-v~W~~~g~~l~~~~~ 154 (212)
T 2yd6_A 82 VASNNVGEISVSTRLTVLREDQ--IPRGFPTIDMGP----QLKVVERTRTATMLCAASGNPDPE-ITWFKDFLPVDTSNN 154 (212)
T ss_dssp EEEETTEEEEEEEEEEEECGGG--CCTTCCEEEECC----CCEEEETTSCEEEEEEEECSSCCE-EEEEETTEEC-----
T ss_pred EEEcCCCcEEEEEEEEEeccCc--cCCCcceeecCC----cceeEecCCCEEEEEEecCCCCCe-EEEEECCccccCcCC
Confidence 9999888777788888843211 011235554433 234678899999999999998887 999999998875422
Q ss_pred -CceE-Ee---eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 168 -AGRI-IT---NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 168 -~~~~-~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
.... .. ...|.|.++..+|+|.|+|.|.|..|...+..+.|.+.
T Consensus 155 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 155 NGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp -CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEE
Confidence 1111 11 47899999999999999999999999887788899988
No 76
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.92 E-value=3.6e-23 Score=193.86 Aligned_cols=269 Identities=14% Similarity=0.173 Sum_probs=163.9
Q ss_pred ecCCcEEEEEEeCCC-CC-cceEEEEeCCCcCCCCCCce-eE-ecCC---eEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 25 LRNEQVLVSCTVDAN-PQ-AQYFTWAFNNSGTAPRPLTS-YS-IQDG---STSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 25 ~~G~~~~l~C~~~~~-p~-~~~v~W~~~~~~~l~~~~~~-~~-~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
.+|+.++|.|.+.+. |. +..++|++++.. ....... .. ..++ ..+.|.|.++..+|.|.|+|.|.|..+...
T Consensus 139 ~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~-~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 217 (475)
T 1iga_A 139 QPDGNVVIACLVQGFFPQEPLSVTWSESGQG-VTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 217 (475)
T ss_pred CCCCeEEEEEEEeeecCCCceEEEEcCCCcc-cceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCce
Confidence 689999999997665 65 349999998754 3211100 11 1122 123688889988999999999999876321
Q ss_pred -ccEEEEEEecc--------ccCCC-CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC--CCeeEEEeCCeEEeeC
Q psy3823 98 -TPCTFHVVKAG--------ECEHP-VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP--YKKLIWTHNGITISNN 165 (365)
Q Consensus 98 -~~~~l~V~~~~--------~~~~~-~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~--~~~i~W~~~~~~l~~~ 165 (365)
..+.+.|.... .+..+ ..+|.+.+.+.. ...+.+|+.+.|.|.+.|.++ +..|.| ++..+...
T Consensus 218 ~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~---~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~ 292 (475)
T 1iga_A 218 DVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPA---LEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSA 292 (475)
T ss_pred eeeEecccccCcccccccccccCCCCCCCcEEEEcCCC---hHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCc
Confidence 33333331000 00000 124544343321 123579999999999998654 235999 44443221
Q ss_pred CC-------CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeec
Q psy3823 166 AS-------AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALR 238 (365)
Q Consensus 166 ~~-------~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 238 (365)
.. .+.....+.|.|.++..+|+|.|+|.|.|..+... ....+.+. ....+|.+.........+..
T Consensus 293 ~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~-~~~~v~~~-------~~~~~P~v~~~~~~~~~v~~ 364 (475)
T 1iga_A 293 VQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTP-LTATLSKS-------GNTFRPEVHLLPPPSEELAL 364 (475)
T ss_pred cccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCc-eEEEeecC-------CCCCCCeEEEECCChHHhcc
Confidence 11 01112356799999999999999999999888653 22333221 00156666533322222678
Q ss_pred CceEEEEEEEeeeCCC-ceeEEEeCCCCCCCCC---CceeEe---eCCC---EEEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 239 NEQVLVSCTVDANPQA-QYFTWAFNNSDTAPRP---LTSYSI---QDGS---TSVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 239 g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~~---~~~~~~---~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
|+.+.|.|.+.+.+++ ..+.|+++|....... ...... .++. .+.|.|.....+|.|.|+|.|.|....
T Consensus 365 g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 365 NELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred CCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 9999999999986433 2499999986543221 001112 2332 356788888788899999999998754
No 77
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.92 E-value=4.6e-24 Score=174.78 Aligned_cols=174 Identities=20% Similarity=0.296 Sum_probs=133.9
Q ss_pred ccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEE
Q psy3823 129 ASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDL 208 (365)
Q Consensus 129 ~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l 208 (365)
...+.+|+.+.|.|.+.+.|.+. +.|++++..+...........+.+|.|.+++..|+|.|+|.+.+..+... ..+.|
T Consensus 13 ~~~v~~G~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l 90 (192)
T 2va4_A 13 NATAERGEEMTFSCRASGSPEPA-ISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDE-KQAFL 90 (192)
T ss_dssp EEETTSCCCEEEECEEECSSCCE-EEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEE-EEEEE
T ss_pred EEEEecCCCEEEEEeeccCCCCe-EEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccc-eEEEE
Confidence 34678999999999999888776 99999999887543322222356899999999999999999999877554 56778
Q ss_pred EEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCC------CCceeEeeCCCEE
Q psy3823 209 NINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPR------PLTSYSIQDGSTS 282 (365)
Q Consensus 209 ~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~------~~~~~~~~~~~~s 282 (365)
.|. .+|.+...... .+..|+.+.|.|.+.+.|.+. +.|++++...... ............+
T Consensus 91 ~V~----------~~p~~~~~~~~--~~~~g~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (192)
T 2va4_A 91 QVF----------VQPHIIQLKNE--TTYENGQVTLVCDAEGEPIPE-ITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSS 157 (192)
T ss_dssp EEE----------EEEEEEEECCE--EECTTSEEEEEEEEEEESCCE-EEEEETTTTEEECTTCBCTTSCEEEEEETTEE
T ss_pred EEE----------ccCcccccCcc--eEEeCCeEEEEEEecCCCCCc-EEEEeCCCCceeeccccccCCcEEEeeccCce
Confidence 887 66665543322 266799999999999999998 9999984322111 1223333344567
Q ss_pred EEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 283 VARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 283 ~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
.|.|.+++.+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 158 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 158 SLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 89999999999999999999999999888888773
No 78
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.92 E-value=2.4e-23 Score=170.47 Aligned_cols=170 Identities=13% Similarity=0.244 Sum_probs=134.6
Q ss_pred ceec-CCcEEEEEEEEecCC-CCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEE
Q psy3823 131 VLNE-GVDIYFDCHIQANPP-YKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDL 208 (365)
Q Consensus 131 ~~~~-g~~v~l~C~~~~~p~-~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l 208 (365)
.+.+ |+.+.|.|.+.+.+. ...+.|++++..+..... ...+..|.|.+++.+|+|.|+|.+.|. +.. +..+.|
T Consensus 13 ~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~-~~~~~l 87 (190)
T 2wv3_A 13 IIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRK---NASNMEYRINKPRAEDSGEYHCVYHFV-SAP-KANATI 87 (190)
T ss_dssp ECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCB---CCSEEEEEESSCCGGGCEEEEEEEEET-TEE-EEEEEE
T ss_pred EEccCCceEEEEEEeccCCCCceEEEEEECCEECcccce---EeccEEEEEecCCcccCEEEEEEEEeC-Ccc-cccEEE
Confidence 4556 999999999998775 234999999998864322 225678999999999999999999998 543 367888
Q ss_pred EEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEe--CCCCCCC--CCCceeEeeCCCEEEE
Q psy3823 209 NINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAF--NNSDTAP--RPLTSYSIQDGSTSVA 284 (365)
Q Consensus 209 ~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~--~~~~~~~--~~~~~~~~~~~~~s~l 284 (365)
.|. .+|.+........ +..|+.+.|.|.+.+.|.+. +.|++ ++..... ...+.....++..+.|
T Consensus 88 ~V~----------~~p~~~~~~~~~~-~~~g~~v~l~C~~~g~p~p~-i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L 155 (190)
T 2wv3_A 88 EVK----------AAPDITGHKRSEN-KNEGQDAMMYCKSVGYPHPE-WMWRKKENGVFEEISNSSGRFFIINKENYTEL 155 (190)
T ss_dssp EEE----------CCCEEEEECSEEE-EETTSCEEEEEEEECSSCCE-EEEEEEETTEEEECCCTTSCEEEEECSSEEEE
T ss_pred EEe----------cCCcccccCCcce-eeCCCcEEEEEEeCccCCCc-eEEEEcCCCceeeeecCCCeEEEecCCCeeEE
Confidence 898 8888765443333 88999999999999999997 99999 4432211 2334445556666789
Q ss_pred EEcCCC-cccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 285 RYTPTS-ELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 285 ~i~~v~-~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
.|.+++ .+|+|.|+|.|.|..|....++.|.|.
T Consensus 156 ~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 156 NIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 999999 799999999999999999998888875
No 79
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.92 E-value=2e-24 Score=201.38 Aligned_cols=272 Identities=16% Similarity=0.159 Sum_probs=157.8
Q ss_pred EecCCcEEEEEEeCCC-CC-cceEEEEeCCCcCCCCCCceeE-ecCC---eEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 24 ALRNEQVLVSCTVDAN-PQ-AQYFTWAFNNSGTAPRPLTSYS-IQDG---STSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 24 v~~G~~~~l~C~~~~~-p~-~~~v~W~~~~~~~l~~~~~~~~-~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
+.+|+.++|.|.+.+. |. + .++|++++.. +........ ..++ ..+.|.|.++..+| |.|+|.|.|..+...
T Consensus 144 ~~~g~~v~L~C~~~g~~P~~~-~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~ 220 (457)
T 1hzh_H 144 STSGGTAALGCLVKDYFPEPV-TVSWNSGALT-SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 220 (457)
T ss_dssp CCTTCCEEEEEEEESBBSCCC-EEEETTTTBC-TTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEE
T ss_pred ccCCCcEEEEEEEeEEeCCCe-EEEEEeCCEe-ccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcc
Confidence 5789999999996555 65 6 9999999876 432111111 1222 22479999999999 999999999765543
Q ss_pred ccEEEEEEecc------ccCCC--CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCC---CeeEEEeCCeEEeeCC
Q psy3823 98 TPCTFHVVKAG------ECEHP--VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPY---KKLIWTHNGITISNNA 166 (365)
Q Consensus 98 ~~~~l~V~~~~------~~~~~--~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~---~~i~W~~~~~~l~~~~ 166 (365)
....+.+.... .+..+ ..+|.+.+.+.. ....+.+|++++|.|.+.|.+++ ..+.|++++..+....
T Consensus 221 ~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~--~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~ 298 (457)
T 1hzh_H 221 VDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPK--PKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK 298 (457)
T ss_dssp EEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCC--HHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCE
T ss_pred eeEEecccCCCcccccCCCCCccccCCceEEeECcC--chhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccc
Confidence 33333221000 00000 124555444322 11126789999999999987654 2599999998875321
Q ss_pred CCc-eEEeeceEEEee------ecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecC
Q psy3823 167 SAG-RIITNQTLVLQS------VTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRN 239 (365)
Q Consensus 167 ~~~-~~~~~~~l~i~~------~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g 239 (365)
... ....++.+.+.. ...+|+|.|+|.|.|..+... ....+.+. .....+|.+.........+..|
T Consensus 299 ~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~-~~~~v~~~------~~~~~~P~v~~~~~~~~~~~~~ 371 (457)
T 1hzh_H 299 TKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP-IEKTISKA------KGQPREPQVYTLPPSRDELTKN 371 (457)
T ss_dssp EEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSC-EEEEECCC------CCCCBCCEEEEECCCGGGGGSS
T ss_pred cccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCc-ceEEEEcc------cCCCCCCeEEEECCCccccCCC
Confidence 100 111233444432 233449999999998755332 22222210 0011556654332221224455
Q ss_pred ceEEEEEEEeeeCCCc-eeEEEeCCCCCCCCCC-ceeEeeCCCE---EEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 240 EQVLVSCTVDANPQAQ-YFTWAFNNSDTAPRPL-TSYSIQDGST---SVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 240 ~~~~l~C~~~~~p~~~-~~~W~~~~~~~~~~~~-~~~~~~~~~~---s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
+ +.|.|.+.|.+++. .+.|+++|........ ......++.. +.|.|.....+|+|.|+|.|.|.....
T Consensus 372 ~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 444 (457)
T 1hzh_H 372 Q-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 444 (457)
T ss_dssp E-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred c-EEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCCC
Confidence 5 99999999975542 4999999865422111 0111234432 346666665678999999999986543
No 80
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.91 E-value=8.9e-24 Score=173.44 Aligned_cols=185 Identities=13% Similarity=0.179 Sum_probs=137.4
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCC--ceeEecCCeEEEEEEccCCCCCCeEEEEE
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPL--TSYSIQDGSTSVARYTPTSELEYGTLLCW 88 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 88 (365)
+|.+.. .+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +.... ............|.|.+++.+|+|.|+|.
T Consensus 5 ~P~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 81 (194)
T 2a38_A 5 APTFTQ-PLQSVVVLEGSTATFEAHISGFPVP-EVSWFRDGQV-ISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLK 81 (194)
T ss_dssp EEEEEE-CCCCEEEETTSCEEEEEEEEEESCC-EEEEEESSSB-CCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCeEEc-cCCceEEECCCEEEEEEEEEecCCC-EEEEEECCEE-cccccCCceEEEeCCCEEEEEECCCCcccCEEEEEE
Confidence 444433 4455678999999999998888988 9999999988 65443 22222233446899999999999999999
Q ss_pred EEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCC
Q psy3823 89 ARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASA 168 (365)
Q Consensus 89 a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~ 168 (365)
+.+..+.....+.|.|... ..+|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+......
T Consensus 82 ~~n~~~~~~~~~~l~v~~~------~~~p~~~~~~----~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~~~~~~~~~~~ 150 (194)
T 2a38_A 82 ATNGSGQATSTAELLVKAE------TAPPNFVQRL----QSMTVRQGSQVRLQVRVTGIPTPV-VKFYRDGAEIQSSLDF 150 (194)
T ss_dssp EEETTEEEEEEEEEEEECC------CEEEEEEECC----CCEEECTTEEEEEEEEEEEESCCE-EEEEETTEECCCSSSE
T ss_pred EEcCCceEeEEEEEEEccC------CCCCEEEeCC----ccEEEcCCCEEEEEEEEEEecCCe-EEEEECCEECCCCCcE
Confidence 9998877767777877311 1355544433 334678999999999999988887 9999999988754332
Q ss_pred ceEEe--eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEE
Q psy3823 169 GRIIT--NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNI 210 (365)
Q Consensus 169 ~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v 210 (365)
..... ..+|.|.++...|+|.|+|.+.|..|... ..+.|.|
T Consensus 151 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V 193 (194)
T 2a38_A 151 QISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRAT-STAELLV 193 (194)
T ss_dssp EEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEE-EEEEEEE
T ss_pred EEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceE-EEEEEEE
Confidence 22222 22799999999999999999999998654 4555555
No 81
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.91 E-value=1.3e-23 Score=172.36 Aligned_cols=186 Identities=20% Similarity=0.266 Sum_probs=139.8
Q ss_pred CCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCC--CceEEe--eceEEEeeecCCCCeEEE
Q psy3823 116 KPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNAS--AGRIIT--NQTLVLQSVTRHSGGLYA 191 (365)
Q Consensus 116 ~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~--~~~~~~--~~~l~i~~~~~~d~G~Y~ 191 (365)
+|.+...+ ....+.+|+++.|.|.+.+.|.+. +.|+++|..+..... ...... ...|.|.+++..|+|.|+
T Consensus 5 ~P~~~~~~----~~~~v~~G~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 79 (194)
T 2a38_A 5 APTFTQPL----QSVVVLEGSTATFEAHISGFPVPE-VSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYS 79 (194)
T ss_dssp EEEEEECC----CCEEEETTSCEEEEEEEEEESCCE-EEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCeEEccC----CceEEECCCEEEEEEEEEecCCCE-EEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEE
Confidence 45554433 335788999999999999988776 999999988865432 222222 458999999999999999
Q ss_pred EEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCC
Q psy3823 192 CSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPL 271 (365)
Q Consensus 192 C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~ 271 (365)
|.+.|..+... ..+.|.|... ..+|.+...... ..+..|+.+.|.|.+.+.|.+. +.|+++|.... ...
T Consensus 80 C~~~n~~~~~~-~~~~l~v~~~-------~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~-v~W~~~~~~~~-~~~ 148 (194)
T 2a38_A 80 LKATNGSGQAT-STAELLVKAE-------TAPPNFVQRLQS-MTVRQGSQVRLQVRVTGIPTPV-VKFYRDGAEIQ-SSL 148 (194)
T ss_dssp EEEEETTEEEE-EEEEEEEECC-------CEEEEEEECCCC-EEECTTEEEEEEEEEEEESCCE-EEEEETTEECC-CSS
T ss_pred EEEEcCCceEe-EEEEEEEccC-------CCCCEEEeCCcc-EEEcCCCEEEEEEEEEEecCCe-EEEEECCEECC-CCC
Confidence 99999877544 4556666510 023333333322 3388999999999999999998 99999987543 334
Q ss_pred ceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 272 TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 272 ~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
......++..+.|.|.++..+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 149 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 149 DFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp SEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 4555566667789999999999999999999999999888888763
No 82
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.91 E-value=5.5e-23 Score=168.95 Aligned_cols=186 Identities=14% Similarity=0.186 Sum_probs=140.6
Q ss_pred CCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEe--eceEEEeeecCCCCeEEEE
Q psy3823 115 DKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIIT--NQTLVLQSVTRHSGGLYAC 192 (365)
Q Consensus 115 ~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C 192 (365)
.+|.+...+ ....+.+|+++.|.|.+.+.|.+. +.|++++..+........... ..+|.|.+++.+|+|.|+|
T Consensus 6 ~~P~~~~~~----~~~~v~~G~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 80 (197)
T 3lcy_A 6 EAPGIRKEM----KDVTTKLGEAAQLSCQIVGRPLPD-IKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTC 80 (197)
T ss_dssp EEEEEEECC----CCEEEETTSEEEEEEEEEEESCCE-EEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEE
T ss_pred CCCcccccC----CceEEeCCCcEEEEEEEecCCCCE-EEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEE
Confidence 355555443 345788999999999999988776 999999998865433222222 2379999999999999999
Q ss_pred EEEcCCCCCCcccEEEEEeeeeecccccCCCCceecC--ccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCC
Q psy3823 193 SAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQS--QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRP 270 (365)
Q Consensus 193 ~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~--~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~ 270 (365)
.+.|..+... ..+.|.|. ..|.+... ......+..|+.+.|.|.+.+.|.+. +.|++++.... ..
T Consensus 81 ~~~n~~~~~~-~~~~l~v~----------~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~~-~~ 147 (197)
T 3lcy_A 81 IATNEVGEVE-TSSKLLLQ----------ATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPA-MTWFHGQKLLQ-NS 147 (197)
T ss_dssp EEECSSCEEE-EEEEEEEE----------EEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCE-EEEEETTEECC-CC
T ss_pred EEECCCCcee-EEEEEEEE----------cCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCe-eEEeECCEECC-CC
Confidence 9998887544 55667776 44444321 12333478899999999999999998 99999887443 33
Q ss_pred CceeEeeCCCEEEEEEcCCCc-ccCeEEEEEEEcCCccceecEEEEEEc
Q psy3823 271 LTSYSIQDGSTSVARYTPTSE-LEYGTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 271 ~~~~~~~~~~~s~l~i~~v~~-~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
........+....|.|.++.. +|+|.|+|.|.|..|..+..+.|.|..
T Consensus 148 ~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 148 ENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp SSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred CceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 444455556667899999985 899999999999999999888888764
No 83
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.91 E-value=5.8e-23 Score=171.31 Aligned_cols=194 Identities=19% Similarity=0.266 Sum_probs=137.2
Q ss_pred CCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEE---eeceEEEeee-cCCCCeEE
Q psy3823 115 DKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRII---TNQTLVLQSV-TRHSGGLY 190 (365)
Q Consensus 115 ~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~---~~~~l~i~~~-~~~d~G~Y 190 (365)
.+|.+...+ .+..+.+|+.+.|.|.+.|.|.+. +.|++++..+.......... ....|.|.++ +..|+|.|
T Consensus 5 ~~P~~~~~p----~~~~v~~G~~v~L~C~~~g~p~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y 79 (212)
T 2yd6_A 5 TPPRFTRTP----VDQTGVSGGVASFICQATGDPRPK-IVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIY 79 (212)
T ss_dssp EEEEEEECC----CCEEEETTSCEEEEEEEEEESCCE-EEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEE
T ss_pred CCCeEEeCc----ceeEEecCCeEEEEEEEeeCCCCE-EEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEE
Confidence 366665544 335688999999999999988876 99999999886432211111 1456999999 59999999
Q ss_pred EEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCC
Q psy3823 191 ACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRP 270 (365)
Q Consensus 191 ~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~ 270 (365)
+|.+.|..|... ..+.|.|..... .....|.+...+.. ..+..|+.+.|.|.+.|.|.+. +.|+++|.......
T Consensus 80 ~C~a~n~~g~~~-~~~~l~V~~~~~---~~~~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~-v~W~~~g~~l~~~~ 153 (212)
T 2yd6_A 80 ECVASNNVGEIS-VSTRLTVLREDQ---IPRGFPTIDMGPQL-KVVERTRTATMLCAASGNPDPE-ITWFKDFLPVDTSN 153 (212)
T ss_dssp EEEEEETTEEEE-EEEEEEEECGGG---CCTTCCEEEECCCC-EEEETTSCEEEEEEEECSSCCE-EEEEETTEEC----
T ss_pred EEEEEcCCCcEE-EEEEEEEeccCc---cCCCcceeecCCcc-eeEecCCCEEEEEEecCCCCCe-EEEEECCccccCcC
Confidence 999999887643 567777762100 00012444443333 2378899999999999999998 99999987544321
Q ss_pred --CceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccce-ecEEEEEEcC
Q psy3823 271 --LTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQR-TPCTFHVVKA 319 (365)
Q Consensus 271 --~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~ 319 (365)
........+..+.|.|.+++.+|+|.|+|.|.|..|... ..+.|.|..+
T Consensus 154 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~ 205 (212)
T 2yd6_A 154 NNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGT 205 (212)
T ss_dssp --CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred CCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEec
Confidence 222333345567899999999999999999999999864 5566766654
No 84
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.91 E-value=3.6e-23 Score=168.14 Aligned_cols=173 Identities=13% Similarity=0.236 Sum_probs=134.8
Q ss_pred eCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEe--cCCeEEEEEEccCCCCCCeEEEEEEEeCC
Q psy3823 16 QSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSI--QDGSTSVARYTPTSELEYGTLLCWARNEQ 93 (365)
Q Consensus 16 ~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~ 93 (365)
...+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +......... .......|.|.+++.+|+|.|+|.+.+..
T Consensus 6 ~~~p~~~~v~~G~~v~l~C~~~~~p~~-~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 83 (182)
T 1rhf_A 6 MGAPVKLTVSQGQPVKLNCSVEGMEEP-DIQWVKDGAV-VQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGG 83 (182)
T ss_dssp -CCCEEEEEETTCCEEEEEEEESCSSC-CEEEEETTEE-CCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCT
T ss_pred EeCCcceEEeCCCcEEEEEEEeCCCCC-eEEEEECCee-cCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCC
Confidence 345667889999999999997788998 9999999988 6554332222 22234689999999999999999999886
Q ss_pred CCC-cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEE
Q psy3823 94 GNQ-RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRII 172 (365)
Q Consensus 94 ~~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~ 172 (365)
+.. ...+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.+.|.+..+.|++++..+.... .
T Consensus 84 ~~~~~~~~~l~V---------~~~p~~~~~~----~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~-----~ 145 (182)
T 1rhf_A 84 ETEISQPVWLTV---------EGVPFFTVEP----KDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPA-----P 145 (182)
T ss_dssp TCEECCCEEEEE---------ECSCEEEECC----CCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSE-----E
T ss_pred CcEEEEEEEEEE---------ecCCeEEecC----cceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCC-----C
Confidence 643 37888998 6678766644 234688999999999999998884499999998885321 1
Q ss_pred eeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEE
Q psy3823 173 TNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNI 210 (365)
Q Consensus 173 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v 210 (365)
....|.|.++ +|+|.|+|.|.|..|...+..+.|.|
T Consensus 146 ~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 146 SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 4568888887 58999999999999877656777766
No 85
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.91 E-value=1.5e-22 Score=165.67 Aligned_cols=177 Identities=20% Similarity=0.265 Sum_probs=133.9
Q ss_pred cCCeEeeCCceEEEEec-CCcEEEEEEeCCCCC--cceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEE
Q psy3823 10 DEPVCKQSQQRIYGALR-NEQVLVSCTVDANPQ--AQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLL 86 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~-G~~~~l~C~~~~~p~--~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 86 (365)
.+|.+... ....+.+ |+.++|.|.+.+.|. + .++|++++.. +....... ....|.|.+++.+|+|.|+
T Consensus 2 ~~P~i~~~--~~~~v~~~G~~v~l~C~~~~~~~~~~-~v~W~~~~~~-~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~ 72 (190)
T 2wv3_A 2 NEPRIVTS--EEVIIRDSLLPVTLQCNLTSSSHTLM-YSYWTKNGVE-LTATRKNA-----SNMEYRINKPRAEDSGEYH 72 (190)
T ss_dssp -CCEEEEC--CCEECCCSSSCEEEEEEEEECSSCEE-EEEEEETTEE-CTTCCBCC-----SEEEEEESSCCGGGCEEEE
T ss_pred CCCccccc--ceEEEccCCceEEEEEEeccCCCCce-EEEEEECCEE-CcccceEe-----ccEEEEEecCCcccCEEEE
Confidence 45666552 2334456 999999999777776 6 9999999988 65543311 3458999999999999999
Q ss_pred EEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe--CCeEEee
Q psy3823 87 CWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH--NGITISN 164 (365)
Q Consensus 87 C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~--~~~~l~~ 164 (365)
|.+.+. +.....+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.|+|.+. +.|++ ++..+..
T Consensus 73 C~~~n~-~~~~~~~~l~V---------~~~p~~~~~~----~~~~~~~g~~v~l~C~~~g~p~p~-i~W~~~~~g~~~~~ 137 (190)
T 2wv3_A 73 CVYHFV-SAPKANATIEV---------KAAPDITGHK----RSENKNEGQDAMMYCKSVGYPHPE-WMWRKKENGVFEEI 137 (190)
T ss_dssp EEEEET-TEEEEEEEEEE---------ECCCEEEEEC----SEEEEETTSCEEEEEEEECSSCCE-EEEEEEETTEEEEC
T ss_pred EEEEeC-CcccccEEEEE---------ecCCcccccC----CcceeeCCCcEEEEEEeCccCCCc-eEEEEcCCCceeee
Confidence 999998 66668888888 6688876654 334688999999999999998886 99999 8887753
Q ss_pred CCC-CceEEe----eceEEEeeec-CCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 165 NAS-AGRIIT----NQTLVLQSVT-RHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 165 ~~~-~~~~~~----~~~l~i~~~~-~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
... ...... ..+|.|.++. .+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 138 ~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~ 189 (190)
T 2wv3_A 138 SNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSAS-VSTVLRVR 189 (190)
T ss_dssp CCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEE-EEEEEEEE
T ss_pred ecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcce-eEEEEEEE
Confidence 222 122221 2479999999 7999999999999998654 55666654
No 86
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.91 E-value=5.5e-23 Score=168.10 Aligned_cols=177 Identities=12% Similarity=0.231 Sum_probs=132.7
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCCcceEEEEe-CCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQAQYFTWAF-NNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGN 95 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~-~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~ 95 (365)
..+....+.+|+.++|.|...+.|. .+.|++ ++.. +..........++....|.|.+++.+|+|.|+|.+.+..+.
T Consensus 7 ~~~~~~~v~~G~~v~L~C~~~~~p~--~v~W~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~ 83 (189)
T 2v44_A 7 ISLSKVELSVGESKFFTCTAIGEPE--SIDWYNPQGEK-IISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQ 83 (189)
T ss_dssp ESCSEEEEETTCCEEEEEEEEECCS--EEEEECTTSCB-CCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred ecCCceEEecCCcEEEEEEeecCCe--eEEEEeCCCCc-cCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCC
Confidence 4456677899999999999767655 899999 6666 65555544445555668999999999999999999998776
Q ss_pred C-cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCc-eEEe
Q psy3823 96 Q-RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAG-RIIT 173 (365)
Q Consensus 96 ~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~-~~~~ 173 (365)
. ...+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+....... ....
T Consensus 84 ~~~~~~~l~v---------~~~p~~~~~~----~~~~~~~g~~~~l~C~~~g~p~p~-v~W~~~~~~~~~~~~~~~~~~~ 149 (189)
T 2v44_A 84 TQEATVVLEI---------YQKLTFREVV----SPQEFKQGEDAEVVCRVSSSPAPA-VSWLYHNEEVTTISDNRFAMLA 149 (189)
T ss_dssp EEEEEEEEEE---------ECCCEEESCC----CSEEEETTSCEEECCEEECSSCCE-EEEEEEC--CEECCCTTEEECT
T ss_pred cEEEEEEEEE---------ecCCceeecC----CcEEEeCCCCEEEEEEECcCCCCc-EEEEECCcEEeccCCCCEEEec
Confidence 5 47778888 5566544322 334678999999999999988886 99999998886433323 3334
Q ss_pred eceEEEeeecCCCCeEEEEEEEcCCCCCC-cccEEEEE
Q psy3823 174 NQTLVLQSVTRHSGGLYACSAINSQGEGG-STPFDLNI 210 (365)
Q Consensus 174 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-s~~~~l~v 210 (365)
++.|.|.++..+|+|.|+|.|.|..+... ...+.+.|
T Consensus 150 ~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v~V 187 (189)
T 2v44_A 150 NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIV 187 (189)
T ss_dssp TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred CCcEEEEEcCcccCeEEEEEEEccccCceeeeeEEEEE
Confidence 67999999999999999999999986442 23344444
No 87
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.91 E-value=2.5e-23 Score=170.44 Aligned_cols=174 Identities=20% Similarity=0.293 Sum_probs=134.9
Q ss_pred ccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEE-eeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEE
Q psy3823 129 ASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRII-TNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFD 207 (365)
Q Consensus 129 ~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~ 207 (365)
...+.+|+++.|.|.+.+.|.+. +.|++++..+.......... ....|.|.+++..|+|.|+|.+.+..+...+....
T Consensus 16 ~~~~~~G~~v~l~C~~~~~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~ 94 (192)
T 2iep_A 16 TVDALVEEVATFMCAVESYPQPE-ISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGA 94 (192)
T ss_dssp EEEEETTSCEEEECCEEEESCCE-EEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEE
T ss_pred ceeeeCCCcEEEEeeCCCCCCCe-EEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEE
Confidence 34678999999999999988876 99999999886533322222 24569999999999999999999988876556677
Q ss_pred EEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEc
Q psy3823 208 LNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYT 287 (365)
Q Consensus 208 l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~ 287 (365)
|.|. .+|.+...... ..+..|+.+.|.|.+.+.|.+. +.|++++..... ........++ .|.|.
T Consensus 95 l~v~----------~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~-v~W~~~~~~~~~-~~~~~~~~~~---~L~i~ 158 (192)
T 2iep_A 95 LQVK----------MKPKITRPPIN-VKIIEGLKAVLPCTTMGNPKPS-VSWIKGDSALRE-NSRIAVLESG---SLRIH 158 (192)
T ss_dssp EEEE----------EEEEEEECCCC-EEEETTSCEEECCEEEEESCCE-EEEEETTEECCC-CSSEEECTTS---CEEES
T ss_pred EEEE----------eCCccccCCcc-eEEeCCCcEEEEEEEeccCCce-EEEEeCCEEccC-CCcEEEecCC---cEEEe
Confidence 8887 66766654433 3388999999999999999998 999998864432 2223333333 49999
Q ss_pred CCCcccCeEEEEEEEcCCccc-eecEEEEEEcC
Q psy3823 288 PTSELEYGTLLCWARNEQGSQ-RTPCTFHVVKA 319 (365)
Q Consensus 288 ~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 319 (365)
++..+|+|.|+|.|.|..|.. +..+.|.|..+
T Consensus 159 ~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~p 191 (192)
T 2iep_A 159 NVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVF 191 (192)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred cCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeC
Confidence 999999999999999999987 55788888654
No 88
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.91 E-value=6.6e-25 Score=203.31 Aligned_cols=267 Identities=13% Similarity=0.130 Sum_probs=165.4
Q ss_pred EecCCcEEEEEEeCCC-CCcceEEEEeCCCcCCCCCCceeEecCC---eEEEEEEccCCCCCCeEEEEEEEeCCCCCccc
Q psy3823 24 ALRNEQVLVSCTVDAN-PQAQYFTWAFNNSGTAPRPLTSYSIQDG---STSVARYTPTSELEYGTLLCWARNEQGNQRTP 99 (365)
Q Consensus 24 v~~G~~~~l~C~~~~~-p~~~~v~W~~~~~~~l~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~ 99 (365)
+.+|+.++|.|.+.+. |.+..++|++++.. +...........+ ..+.|.|.+++.+| |.|+|.|.|..+.....
T Consensus 131 ~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~ 208 (434)
T 1igy_B 131 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS-SGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVD 208 (434)
T ss_dssp CCCTTEEEEEEEEEEEBSSCCEEEETTTTBC-SSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEE
T ss_pred cCCCCcEEEEEEEeeecCCCeEEEEeeCCcC-CCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccce
Confidence 4689999999996554 65448999999875 3211000000111 22468999999889 99999999988765433
Q ss_pred EEEEEEec----cccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC---CCeeEEEeCCeEEeeCCCC----
Q psy3823 100 CTFHVVKA----GECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP---YKKLIWTHNGITISNNASA---- 168 (365)
Q Consensus 100 ~~l~V~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~---~~~i~W~~~~~~l~~~~~~---- 168 (365)
..+.+... ..+..+.. |.+.+.+... ...+.+|+.++|.|.+.|.++ +..|.|++++..+......
T Consensus 209 ~~~~~~~~~~~v~~~~~~~~-p~v~~~~p~~--~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~ 285 (434)
T 1igy_B 209 KKIVPRDCGCKPCICTVPEV-SSVFIFPPKP--KDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREE 285 (434)
T ss_dssp EECCCCCCCCCCCCCCCSSS-CCEEEECCCH--HHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCC
T ss_pred eeccCCCCCCccccCCCCcC-cEEEEeCCCh--HHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCccee
Confidence 33332000 00000011 5554443221 112789999999999998742 3349999998776432111
Q ss_pred ---ceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCC-cccEEE--EEeeeeecccccCCCCceecCccceeeeecCceE
Q psy3823 169 ---GRIITNQTLVLQSVTRHSGGLYACSAINSQGEGG-STPFDL--NINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQV 242 (365)
Q Consensus 169 ---~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-s~~~~l--~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~ 242 (365)
+.......|.|.++..+|+|.|+|.|.|..+... ...+.+ .+. .+|.+........ ...|+.+
T Consensus 286 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~----------~~P~v~~~~~~~~-~~~~~~~ 354 (434)
T 1igy_B 286 QFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKP----------RAPQVYTIPPPKE-QMAKDKV 354 (434)
T ss_dssp CCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCC----------BCCCCEEECCCSS-SSSSSEE
T ss_pred CCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCC----------cCCEEEEECCCHH-HhcCCcE
Confidence 0111245799999999999999999999887542 122222 222 5666543222211 3357789
Q ss_pred EEEEEEeeeCCC-ceeEEEeCCCCCCCCCCcee--EeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 243 LVSCTVDANPQA-QYFTWAFNNSDTAPRPLTSY--SIQDGS---TSVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 243 ~l~C~~~~~p~~-~~~~W~~~~~~~~~~~~~~~--~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
.|.|.+.|.+++ ..+.|+++|..... ..... ...++. .+.|.|.....+|+|.|+|.|.|....
T Consensus 355 ~L~C~~~g~~P~~~~v~W~k~g~~l~~-~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 355 SLTCMITDFFPEDITVEWQSDGQAPEN-YKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp EEEEEEEEEBCSCEEEEEEETTSCCSC-CEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred EEEEEEEeeECCCeEEEEEECCEecCC-ceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 999999986443 24999999875421 11111 123343 245777777778899999999998654
No 89
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.91 E-value=2.6e-23 Score=170.40 Aligned_cols=184 Identities=21% Similarity=0.317 Sum_probs=141.0
Q ss_pred cccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCC-CceeEecCCeEEEEEEccCCCCCCeEEE
Q psy3823 8 STDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRP-LTSYSIQDGSTSVARYTPTSELEYGTLL 86 (365)
Q Consensus 8 ~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 86 (365)
++.+|.+ ...+..+.+.+|+.++|.|.+.+.|.+ .+.|++++.. +... .......++ ..|.|.+++.+|+|.|+
T Consensus 4 ~~~~P~i-~~~~~~~~~~~G~~v~l~C~~~~~p~~-~i~W~~~~~~-~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~ 78 (192)
T 2iep_A 4 LPKAPVI-TTPLETVDALVEEVATFMCAVESYPQP-EISWTRNKIL-IKLFDTRYSIRENG--QLLTILSVEDSDDGIYC 78 (192)
T ss_dssp CCEEEEE-SSCCCEEEEETTSCEEEECCEEEESCC-EEEEEETTEE-CCTTCTTEEEEGGG--TEEEESSCCGGGCEEEE
T ss_pred cCCCcee-ecCccceeeeCCCcEEEEeeCCCCCCC-eEEEEECCEE-ccccCccEEEcCCc--cEEEEcCCCcccCeEEE
Confidence 3445544 344566778999999999998788998 9999999987 5432 222222222 27999999999999999
Q ss_pred EEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeC
Q psy3823 87 CWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNN 165 (365)
Q Consensus 87 C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~ 165 (365)
|.+.+..+... ..+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+...
T Consensus 79 C~~~~~~~~~~~~~~~l~v---------~~~p~~~~~~----~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~~~~~~~~ 144 (192)
T 2iep_A 79 CTANNGVGGAVESCGALQV---------KMKPKITRPP----INVKIIEGLKAVLPCTTMGNPKPS-VSWIKGDSALREN 144 (192)
T ss_dssp EEEECSSSCCEEEEEEEEE---------EEEEEEEECC----CCEEEETTSCEEECCEEEEESCCE-EEEEETTEECCCC
T ss_pred EEEEcCCCceeEeEEEEEE---------EeCCccccCC----cceEEeCCCcEEEEEEEeccCCce-EEEEeCCEEccCC
Confidence 99999877643 5667777 4566655433 234678999999999999988886 9999999988643
Q ss_pred CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 166 ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 166 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
. ......+++|.|.++...|+|.|+|.+.|..|...+..+.|.|.
T Consensus 145 ~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 189 (192)
T 2iep_A 145 S-RIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVE 189 (192)
T ss_dssp S-SEEECTTSCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred C-cEEEecCCcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEE
Confidence 2 22233466899999999999999999999998776677888887
No 90
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.90 E-value=4.3e-23 Score=169.67 Aligned_cols=174 Identities=12% Similarity=0.179 Sum_probs=134.6
Q ss_pred CceEEEEecCCcEEEEEEeC-CCCCcceEEEEeCCCcCCCCCCc--eeEecCCe-------EEEEEEccCCCCCCeEEEE
Q psy3823 18 QQRIYGALRNEQVLVSCTVD-ANPQAQYFTWAFNNSGTAPRPLT--SYSIQDGS-------TSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~-~~p~~~~v~W~~~~~~~l~~~~~--~~~~~~~~-------~~~l~i~~~~~~d~G~Y~C 87 (365)
.+....+.+|+.++|.|.+. +.|.+ .+.|++++.. +..... ........ ...|.|.+++.+|+|.|+|
T Consensus 8 ~p~~~~v~~G~~v~l~C~~~~~~p~~-~v~W~~~g~~-l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 85 (195)
T 2c5d_C 8 NPGNITGARGLTGTLRCQLQVQGEPP-EVHWLRDGQI-LELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQC 85 (195)
T ss_dssp CCCCEEECTTCCEEEEEEEEEESSCC-CCEEEETTEE-CCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEE
T ss_pred ChhheEEecCCcEEEecccccCCCCc-EEEEEECCEE-cccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEE
Confidence 45567789999999999977 88988 9999999988 665422 11111111 4689999999999999999
Q ss_pred EEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCC
Q psy3823 88 WARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNA 166 (365)
Q Consensus 88 ~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~ 166 (365)
.+.+..+... ..+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.|.|.+..+.|++++..+....
T Consensus 86 ~~~~~~~~~~~~~~~l~V---------~~~p~~~~~~----~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~ 152 (195)
T 2c5d_C 86 LVFLGHQTFVSQPGYVGL---------EGLPYFLEEP----EDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAP 152 (195)
T ss_dssp EEEETTEEEECCCEEEEE---------CCSCEEEECC----CCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSST
T ss_pred EEEeCCCceecccEEEEE---------ecCCeEEcCC----CcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCC
Confidence 9999776544 5588998 6778766544 234678899999999999998883499999998886543
Q ss_pred CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 167 SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 167 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
.. ..+..|.|.+++ |+|.|+|.|.|..|...+..+.|.|.
T Consensus 153 ~~---~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V~ 192 (195)
T 2c5d_C 153 GH---GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITVL 192 (195)
T ss_dssp TS---SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred Cc---CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEEe
Confidence 22 345789999887 78999999999998765567777763
No 91
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.90 E-value=7.6e-23 Score=169.83 Aligned_cols=185 Identities=15% Similarity=0.164 Sum_probs=127.4
Q ss_pred CeEeeCCceEEEEecCCcEEEEEEeC-CCCCcceEEEEeCCCcCCCCCCceeEecC--CeEEEEEEccCCCCCCeEEEEE
Q psy3823 12 PVCKQSQQRIYGALRNEQVLVSCTVD-ANPQAQYFTWAFNNSGTAPRPLTSYSIQD--GSTSVARYTPTSELEYGTLLCW 88 (365)
Q Consensus 12 p~~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~~v~W~~~~~~~l~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~ 88 (365)
|.++. .....+.+|+.+.|.|... +.|.+ .++|++|+.. +..........+ .....|.|.+++.+|+|.|+|.
T Consensus 4 p~~~~--~~~~~v~eg~~v~l~c~~~~~~P~p-~i~W~kng~~-l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~ 79 (207)
T 3rbs_A 4 PFTKS--ELAVEILEKGQVRFWMQAEKLSGNA-KVNYIFNEKE-IFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ 79 (207)
T ss_dssp --CCE--EEEEEECGGGCEEEEEECSCCCSCC-EEEEEETTEE-ECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEE
T ss_pred Ceeec--CCceEEEeCCeEEEEEEEecCCCCC-EEEEEECCEE-CccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEE
Confidence 44443 3457789999999999964 57999 9999999998 755444333222 3555799999999999999999
Q ss_pred EEeCCCCCcccEEEEEEecc--------ccC----CCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEE
Q psy3823 89 ARNEQGNQRTPCTFHVVKAG--------ECE----HPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIW 155 (365)
Q Consensus 89 a~~~~~~~~~~~~l~V~~~~--------~~~----~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W 155 (365)
|.| +.......+.+.... ... ....+|.+...+ ...+.+|+.+.|.|.+.|. |.|. ++|
T Consensus 80 a~N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-----~~~v~~g~~v~l~C~v~g~~P~p~-i~W 151 (207)
T 3rbs_A 80 LQD--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-----SWEVTGECNVLLKCKVANIKKETH-IVW 151 (207)
T ss_dssp EEE--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-----EEEEETTTEEEEEEEEESCCTTCE-EEE
T ss_pred EEC--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-----CcEEcCCCcEEEEEEEeCCCCCCE-EEE
Confidence 998 333333333221000 000 000256544322 1367899999999999998 7776 999
Q ss_pred EeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEE
Q psy3823 156 THNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLN 209 (365)
Q Consensus 156 ~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~ 209 (365)
++||.++.............+|.|.++..+|+|.|+|.|.|..|... ..+.|.
T Consensus 152 ~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~-~~~~L~ 204 (207)
T 3rbs_A 152 YKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDK-SRLKLV 204 (207)
T ss_dssp EETTEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEE-EEEEEC
T ss_pred EECCEECCCCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEE-EEEEEe
Confidence 99999997543322222345799999999999999999999998655 344443
No 92
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.90 E-value=2.8e-23 Score=170.77 Aligned_cols=189 Identities=18% Similarity=0.220 Sum_probs=140.6
Q ss_pred cccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEE
Q psy3823 8 STDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 8 ~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 87 (365)
+.++|.+.. .+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +..........++....|.|.+++.+|+|.|+|
T Consensus 4 ~~~~P~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 80 (197)
T 3lcy_A 4 SGEAPGIRK-EMKDVTTKLGEAAQLSCQIVGRPLP-DIKWYRFGKE-LIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTC 80 (197)
T ss_dssp CCEEEEEEE-CCCCEEEETTSEEEEEEEEEEESCC-EEEEEETTEE-ECCCSSEEEEESSSEEEEEEECCSGGGCEEEEE
T ss_pred cCCCCcccc-cCCceEEeCCCcEEEEEEEecCCCC-EEEEEECCEE-CCCCccEEEEeCCCEEEEEEecCCccCCEEEEE
Confidence 345565544 3456678999999999998788888 9999999988 665555455555666789999999999999999
Q ss_pred EEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCC
Q psy3823 88 WARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNAS 167 (365)
Q Consensus 88 ~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~ 167 (365)
.+.+..+.....+.|.| ..+|.+..... ......+.+|+.+.|.|.+.+.|.+. +.|++++..+.....
T Consensus 81 ~~~n~~~~~~~~~~l~v---------~~~p~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~~~~~~ 149 (197)
T 3lcy_A 81 IATNEVGEVETSSKLLL---------QATPQFHPGYP-LKEKYYGAVGSTLRLHVMYIGRPVPA-MTWFHGQKLLQNSEN 149 (197)
T ss_dssp EEECSSCEEEEEEEEEE---------EEEEEECTTSC-CCSEEEEETTSCEEEEEEEEEESCCE-EEEEETTEECCCCSS
T ss_pred EEECCCCceeEEEEEEE---------EcCCCCCCCcc-CCcceeecCCCeEEEEEEEeeeeCCe-eEEeECCEECCCCCc
Confidence 99988887777777777 33333211100 00223567899999999999999887 999999998875433
Q ss_pred CceEEe--eceEEEeeecC-CCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 168 AGRIIT--NQTLVLQSVTR-HSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 168 ~~~~~~--~~~l~i~~~~~-~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
...... ...|.|.++.. +|+|.|+|.|.|..|... ..+.|.|.
T Consensus 150 ~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~ 195 (197)
T 3lcy_A 150 ITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVD-AILDVEIQ 195 (197)
T ss_dssp EEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEE-EEEEEEEE
T ss_pred eEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceE-EEEEEEEe
Confidence 222222 26799999985 899999999999998664 56666665
No 93
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.90 E-value=6.1e-23 Score=166.77 Aligned_cols=165 Identities=19% Similarity=0.306 Sum_probs=130.2
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEe----eceEEEeeecCCCCeEEEEEEEcCCCCCCccc
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIIT----NQTLVLQSVTRHSGGLYACSAINSQGEGGSTP 205 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~ 205 (365)
..+.+|+++.|.|.+.+.|.+. +.|++++..+........... ...|.|.+++..|+|.|+|.+.+..+...+..
T Consensus 12 ~~v~~G~~v~l~C~~~~~p~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 90 (182)
T 1rhf_A 12 LTVSQGQPVKLNCSVEGMEEPD-IQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQP 90 (182)
T ss_dssp EEEETTCCEEEEEEEESCSSCC-EEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCC
T ss_pred eEEeCCCcEEEEEEEeCCCCCe-EEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEE
Confidence 4678999999999999988777 999999998865322222222 36899999999999999999999877655578
Q ss_pred EEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeCCCCCCCCCCceeEeeCCCEEEE
Q psy3823 206 FDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNSDTAPRPLTSYSIQDGSTSVA 284 (365)
Q Consensus 206 ~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l 284 (365)
+.|.|. .+|.+...+... .+..|+.+.|.|.+.+.|.| . +.|++++....... .....|
T Consensus 91 ~~l~V~----------~~p~~~~~~~~~-~~~~g~~~~l~C~~~g~p~p~~-v~W~~~~~~~~~~~--------~~~~~L 150 (182)
T 1rhf_A 91 VWLTVE----------GVPFFTVEPKDL-AVPPNAPFQLSCEAVGPPEPVT-IVWWRGTTKIGGPA--------PSPSVL 150 (182)
T ss_dssp EEEEEE----------CSCEEEECCCCE-EECTTCCEEEEEEEECSSSCCE-EEEEETTEECSCSE--------ESSEEE
T ss_pred EEEEEe----------cCCeEEecCcce-EecCCCEEEEEeEecCCCCCCE-EEEEcCCeECCCCC--------CCceEE
Confidence 899999 888876655443 38899999999999999998 7 99999876432210 134569
Q ss_pred EEcCCCcccCeEEEEEEEcCCccce-ecEEEEEE
Q psy3823 285 RYTPTSELEYGTLLCWARNEQGSQR-TPCTFHVV 317 (365)
Q Consensus 285 ~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~ 317 (365)
.|.++ +|+|.|+|.|.|..|... .++.|.|+
T Consensus 151 ~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 151 NVTGV--TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp EECCC--SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred EEecc--ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 99988 589999999999999885 47777763
No 94
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.90 E-value=1e-22 Score=166.35 Aligned_cols=175 Identities=15% Similarity=0.268 Sum_probs=128.5
Q ss_pred ccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCce-EEeeceEEEeeecCCCCeEEEEEEEcCCCCC-CcccE
Q psy3823 129 ASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGR-IITNQTLVLQSVTRHSGGLYACSAINSQGEG-GSTPF 206 (365)
Q Consensus 129 ~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~s~~~ 206 (365)
...+.+|+++.|.|.+.+.|.+. +.|++++..+......+. ...+.+|.|.+++..|+|.|+|.+.+..+.. ....+
T Consensus 11 ~~~v~~G~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~ 89 (189)
T 2v5t_A 11 PQEFKQGEDAEVVCRVSSSPAPA-VSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDI 89 (189)
T ss_dssp SEEEETTSCEEECCEEECSSCCE-EEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEE
T ss_pred CEEEeCCCcEEEEEEEcCCCCCE-EEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEE
Confidence 34688999999999999888776 999999988765333333 3346789999999999999999999887532 22455
Q ss_pred EEEEeeeeecccccCCCCceecCcc-ceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEE
Q psy3823 207 DLNINKMVNLIFNSIDEPVCKQSQQ-RIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVAR 285 (365)
Q Consensus 207 ~l~v~~~~~~~~~~~~~p~~~~~~~-~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~ 285 (365)
.+.+. .+|.+..... ....+..|+.+.|.|.+.+.|.+. +.|+++|..... ........+ ...|.
T Consensus 90 ~l~v~----------~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~-v~W~~~g~~~~~-~~~~~~~~~--~~~L~ 155 (189)
T 2v5t_A 90 IVIVN----------VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPA-ISWFRNGKLIEE-NEKYILKGS--NTELT 155 (189)
T ss_dssp EEEEE----------EEEEEECSCCEEEEETTSCCCEEEECEEEEESCCE-EEEEETTEECCC-SSSEEEETT--TTEEE
T ss_pred EEEec----------CCCCcccccccccccccCCCcEEEEEEEccCCCCe-EEEEECCEECcC-CCcEEEecC--CCEEE
Confidence 66666 5555543332 133477899999999999999998 999998874432 222222222 23599
Q ss_pred EcCCCcccCeEEEEEEEcCCccceecEEEEEEc
Q psy3823 286 YTPTSELEYGTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 286 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 156 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 156 VRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EcCCChhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 999999999999999999999999988888763
No 95
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.90 E-value=7e-23 Score=167.68 Aligned_cols=169 Identities=15% Similarity=0.254 Sum_probs=129.5
Q ss_pred eCCceEEEEecCCcEEEEEEeCCCC-CcceEEEEe-CCCcCCCCC-CceeE-ecCCeEEEEEEccCCCCCCeEEEEEEEe
Q psy3823 16 QSQQRIYGALRNEQVLVSCTVDANP-QAQYFTWAF-NNSGTAPRP-LTSYS-IQDGSTSVARYTPTSELEYGTLLCWARN 91 (365)
Q Consensus 16 ~~~~~~~~v~~G~~~~l~C~~~~~p-~~~~v~W~~-~~~~~l~~~-~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~a~~ 91 (365)
...+....+.+|+.++|.|.+.+.| .+ .+.|++ ++.. +... ..... ........|.|.+++.+|+|.|+|.+.+
T Consensus 6 ~~~p~~~~v~~G~~v~l~C~~~~~~~~~-~v~W~~~~g~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 83 (191)
T 1epf_A 6 DIVPSQGEISVGESKFFLCQVAGDAKDK-DISWFSPNGEK-LSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTA 83 (191)
T ss_dssp EEESSSEEEETTCCEEEEEEECCCSCCC-EEEEECTTSCE-ECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EecCCCcEEcCCCCEEEEEECCCCCCCc-eEEEEeCCCcc-ccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEc
Confidence 3345566789999999999987776 66 999999 7766 5432 22222 2234556899999999999999999999
Q ss_pred CCC-CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCce
Q psy3823 92 EQG-NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGR 170 (365)
Q Consensus 92 ~~~-~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~ 170 (365)
..+ .....+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+........
T Consensus 84 ~~~~~~~~~~~l~v---------~~~p~~~~~~----~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~~~~~~~~~~~~~ 149 (191)
T 1epf_A 84 EDGTQSEATVNVKI---------FQKLMFKNAP----TPQEFKEGEDAVIVCDVVSSLPPT-IIWKHKGRDVILKKDVRF 149 (191)
T ss_dssp TTTEEEEEEEEEEE---------ECCSEEEECC----SSEECCTTSCEEECCEEECSSCCE-EEEEETTEEGGGGCCTTE
T ss_pred CCCcceEEEEEEEe---------ecCceEecCC----CcEeecCCCeEEEEEEECCCCCCE-EEEEECCEEeeccCCceE
Confidence 874 3447778888 5677765544 234678999999999999998887 999999998865433333
Q ss_pred -EEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 171 -IITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 171 -~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
...++.|.|.++...|+|.|+|.|.|..+.
T Consensus 150 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 180 (191)
T 1epf_A 150 IVLSNNYLQIRGIKKTDEGTYRCEGRILARG 180 (191)
T ss_dssp EECTTSCEEETTCCGGGCEEEEEEEEEGGGT
T ss_pred EEecCCeEEECCCChhhCEEEEEEEEEecce
Confidence 334668999999999999999999998753
No 96
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.90 E-value=2.4e-22 Score=164.54 Aligned_cols=174 Identities=16% Similarity=0.293 Sum_probs=131.6
Q ss_pred ccceecCCcEEEEEEEEecCCCCeeEEEe-CCeEEeeCCCCceEE----eeceEEEeeecCCCCeEEEEEEEcCCCCCCc
Q psy3823 129 ASVLNEGVDIYFDCHIQANPPYKKLIWTH-NGITISNNASAGRII----TNQTLVLQSVTRHSGGLYACSAINSQGEGGS 203 (365)
Q Consensus 129 ~~~~~~g~~v~l~C~~~~~p~~~~i~W~~-~~~~l~~~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s 203 (365)
...+.+|+.+.|.|.+.+.++...+.|++ +|..+.......... ....|.|.+++..|+|.|+|.+.+..+...+
T Consensus 11 ~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 90 (191)
T 1epf_A 11 QGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSE 90 (191)
T ss_dssp SEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEE
T ss_pred CcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceE
Confidence 34688999999999999877444599999 888887433322222 2468999999999999999999998865555
Q ss_pred ccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCC-ceeEeeCCCEE
Q psy3823 204 TPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPL-TSYSIQDGSTS 282 (365)
Q Consensus 204 ~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~-~~~~~~~~~~s 282 (365)
..+.|.|. .+|.+...+.... +..|+.+.|.|.+.+.|.+. +.|++++........ ......++
T Consensus 91 ~~~~l~v~----------~~p~~~~~~~~~~-~~~g~~~~l~C~~~g~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~--- 155 (191)
T 1epf_A 91 ATVNVKIF----------QKLMFKNAPTPQE-FKEGEDAVIVCDVVSSLPPT-IIWKHKGRDVILKKDVRFIVLSNN--- 155 (191)
T ss_dssp EEEEEEEE----------CCSEEEECCSSEE-CCTTSCEEECCEEECSSCCE-EEEEETTEEGGGGCCTTEEECTTS---
T ss_pred EEEEEEee----------cCceEecCCCcEe-ecCCCeEEEEEEECCCCCCE-EEEEECCEEeeccCCceEEEecCC---
Confidence 67788888 7777765443333 78999999999999999998 999998864432221 22222233
Q ss_pred EEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 283 VARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 283 ~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
.|.|.+++.+|+|.|+|.|.|..|.......+.|.
T Consensus 156 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v~ 190 (191)
T 1epf_A 156 YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190 (191)
T ss_dssp CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred eEEECCCChhhCEEEEEEEEEecceeEEEEEEEEe
Confidence 49999999999999999999999766555555553
No 97
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.90 E-value=6.5e-23 Score=168.76 Aligned_cols=187 Identities=16% Similarity=0.222 Sum_probs=137.1
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCC-ceeE-ecCCeEEEEEEccCCCCCCeEEEEE
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPL-TSYS-IQDGSTSVARYTPTSELEYGTLLCW 88 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~-~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~ 88 (365)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +.... .... ...+....|.|.+++.+|+|.|+|.
T Consensus 4 ~P~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (197)
T 2j8h_A 4 APHFKE-ELRNLNVRYQSNATLVCKVTGHPKP-IVKWYRQGKE-IIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (197)
T ss_dssp CCEEEE-CCCCEEEETTSCEEEEEEEECSSCC-EEEEEETTEE-CCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEE
T ss_pred CCEEEE-cCCccEEcCCCEEEEEEEEeecCCC-EEEEEECCEE-CccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEE
Confidence 455433 3455778999999999998788998 9999999988 55432 2222 2334456899999999999999999
Q ss_pred EEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcC-CccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCC
Q psy3823 89 ARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLG-RNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNAS 167 (365)
Q Consensus 89 a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~ 167 (365)
+.+..+.....+.|.|. .+|.+..... .......+.+|+.+.|.|.+.+.|.+. +.|++++..+.....
T Consensus 81 ~~n~~g~~~~~~~l~V~---------~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~~ 150 (197)
T 2j8h_A 81 ATNQGGSVSGTASLEVE---------VPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPV-ITWQKGQDLIDNNGH 150 (197)
T ss_dssp EEETTEEEEEEEEEEEE---------EEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCE-EEEEESSCEECSSSS
T ss_pred EEECCCceeEEEEEEEc---------CCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCc-EEEEECCEEeecCCC
Confidence 99988777777888873 3333211100 000223567899999999999998886 999999998875433
Q ss_pred CceEE--eeceEEEee-ecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 168 AGRII--TNQTLVLQS-VTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 168 ~~~~~--~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
..... ....|.|.+ +...|+|.|+|.|.|..|... ..+.|.|.
T Consensus 151 ~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~ 196 (197)
T 2j8h_A 151 YQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQ-KTVELDVA 196 (197)
T ss_dssp CEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEE-EEEEEEEE
T ss_pred EEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEe-EEEEEEEe
Confidence 32222 256899999 999999999999999998754 56666664
No 98
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.90 E-value=3.9e-23 Score=170.80 Aligned_cols=165 Identities=16% Similarity=0.160 Sum_probs=119.4
Q ss_pred EEEecCCcEEEEEE---eCCCCCcceEEEEeCCCcCCCCCC-----------------ceeEecCCeEEEEEEccCCCCC
Q psy3823 22 YGALRNEQVLVSCT---VDANPQAQYFTWAFNNSGTAPRPL-----------------TSYSIQDGSTSVARYTPTSELE 81 (365)
Q Consensus 22 ~~v~~G~~~~l~C~---~~~~p~~~~v~W~~~~~~~l~~~~-----------------~~~~~~~~~~~~l~i~~~~~~d 81 (365)
+.+..|++++|.|. +.+.|.+ .++|+|++.. ..... ............|.|.+++.+|
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~-~V~W~k~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEI-EVSWFKLGPG-EEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISH 80 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTS-EEEEEEEETT-TEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEEcCCCEEEEeeeeccCCCCCc-EEEEEEcCCC-cceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHH
Confidence 56789999999995 6678899 9999998764 32110 0011122345689999999999
Q ss_pred CeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeE
Q psy3823 82 YGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGIT 161 (365)
Q Consensus 82 ~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~ 161 (365)
+|.|+|.|.|..+.....+.|.| ..||.+...+ ....+.+|+.+.|.|.+.|.|.|. +.|++++..
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V---------~~p~~~~~~~----~~~~v~~g~~~~l~C~~~G~P~P~-v~W~~~~~~ 146 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSV---------VKPLTLSVHS----ERSQFPDFSVLTVTCTVNAFPHPH-VQWLMPEGV 146 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEE---------EEEEEEEEEE----EECCSSCSCCEEEEEEEEEESCCE-EEECCC---
T ss_pred CeEEEEEEEcCCCcEEEEEEEEe---------cCCceeeecc----eeEEEcCCCEEEEEEEcCCCCCCE-EEEEECCee
Confidence 99999999998888778888988 5566665554 334678999999999999999987 999987655
Q ss_pred EeeC--CCCc-eEEeeceEE---EeeecCCCCeEEEEEEEcCCCCCC
Q psy3823 162 ISNN--ASAG-RIITNQTLV---LQSVTRHSGGLYACSAINSQGEGG 202 (365)
Q Consensus 162 l~~~--~~~~-~~~~~~~l~---i~~~~~~d~G~Y~C~~~~~~~~~~ 202 (365)
+... ...+ ....+++|. +.++..+|+|.|+|.|.|..|...
T Consensus 147 ~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~ 193 (203)
T 4fa8_A 147 EPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAH 193 (203)
T ss_dssp ---------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEE
T ss_pred ecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEE
Confidence 4321 1112 233345544 468999999999999999999654
No 99
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.90 E-value=1.8e-22 Score=168.01 Aligned_cols=185 Identities=16% Similarity=0.179 Sum_probs=131.3
Q ss_pred eecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEe--eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEE
Q psy3823 132 LNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIIT--NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLN 209 (365)
Q Consensus 132 ~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~ 209 (365)
..+++.+.|.|.+.+.++...+.|+++|..+........... ...|.|.+++.+|+|.|+|.+.|..+... ..+.|.
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~-~~~~l~ 92 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQ-KTVDLS 92 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEE-EEEEEC
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceE-EEEEEE
Confidence 457889999999988664555999999999875433322222 24599999999999999999999766443 344443
Q ss_pred Eeeeeec----------ccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeE-eeC
Q psy3823 210 INKMVNL----------IFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYS-IQD 278 (365)
Q Consensus 210 v~~~~~~----------~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~-~~~ 278 (365)
+...... .+.....|.+.........+..|+.+.|.|.+.+.|.|. +.|++++...... ....+ ..+
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-v~W~~~~~~~~~~-~~~~~~~~~ 170 (212)
T 2r15_A 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPE-VSWLKNEKALAQT-DHCNLKFEA 170 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCE-EEEEETTEEECCC-SSEEEEEET
T ss_pred EeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCce-EEEEECCeECccC-CCEEEEEcC
Confidence 3200000 000001333433333334488999999999999999998 9999998654332 33333 333
Q ss_pred CCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 279 GSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 279 ~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
+..+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 171 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 171 GRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 66778999999999999999999999999999988888743
No 100
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.90 E-value=4.8e-22 Score=162.47 Aligned_cols=170 Identities=16% Similarity=0.295 Sum_probs=127.9
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEe-CCeEEeeCCCCceEEe--eceEEEeeecCCCCeEEEEEEEcCCCCCCcccE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTH-NGITISNNASAGRIIT--NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPF 206 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~-~~~~l~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~ 206 (365)
..+.+|+.+.|.|.+.+.|. .+.|++ ++..+........... ...|.|.+++.+|+|.|+|.+.+..|...+..+
T Consensus 12 ~~v~~G~~v~L~C~~~~~p~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~ 89 (189)
T 2v44_A 12 VELSVGESKFFTCTAIGEPE--SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATV 89 (189)
T ss_dssp EEEETTCCEEEEEEEEECCS--EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEE
T ss_pred eEEecCCcEEEEEEeecCCe--eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEE
Confidence 46789999999999998766 499999 7776654332212211 248999999999999999999999887655778
Q ss_pred EEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCC-CCCceeEeeCCCEEEEE
Q psy3823 207 DLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAP-RPLTSYSIQDGSTSVAR 285 (365)
Q Consensus 207 ~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~-~~~~~~~~~~~~~s~l~ 285 (365)
.|.|. .+|.+....... .+..|+.+.|.|.+.+.|.|. +.|++++..... ...+.....++ .|.
T Consensus 90 ~l~v~----------~~p~~~~~~~~~-~~~~g~~~~l~C~~~g~p~p~-v~W~~~~~~~~~~~~~~~~~~~~~---~L~ 154 (189)
T 2v44_A 90 VLEIY----------QKLTFREVVSPQ-EFKQGEDAEVVCRVSSSPAPA-VSWLYHNEEVTTISDNRFAMLANN---NLQ 154 (189)
T ss_dssp EEEEE----------CCCEEESCCCSE-EEETTSCEEECCEEECSSCCE-EEEEEEC--CEECCCTTEEECTTS---CEE
T ss_pred EEEEe----------cCCceeecCCcE-EEeCCCCEEEEEEECcCCCCc-EEEEECCcEEeccCCCCEEEecCC---cEE
Confidence 88888 777766444333 388999999999999999998 999998875432 12223333333 499
Q ss_pred EcCCCcccCeEEEEEEEcCCccceecEEEEE
Q psy3823 286 YTPTSELEYGTLLCWARNEQGSQRTPCTFHV 316 (365)
Q Consensus 286 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 316 (365)
|.+++.+|+|.|+|.|.|..|.......+.|
T Consensus 155 i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 155 ILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp ETTCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 9999999999999999999987665555544
No 101
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.90 E-value=2.1e-22 Score=177.45 Aligned_cols=189 Identities=19% Similarity=0.298 Sum_probs=127.1
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEe---eceEEEeeecC-CCCeE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIIT---NQTLVLQSVTR-HSGGL 189 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~---~~~l~i~~~~~-~d~G~ 189 (365)
..+|.+...+ .+..+.+|+.+.|.|.+.|.|.+. +.|+++|..+........... ...|.|.++.. .|+|.
T Consensus 4 ~~~P~~~~~p----~~~~v~~G~~v~l~C~~~g~p~~~-i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~ 78 (304)
T 2yd9_A 4 EEPPRFIKEP----KDQIGVSGGVASFVCQATGDPKPR-VTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENV 78 (304)
T ss_dssp CCCCEEEECC----CCEEEETTSCEEEEEEEECSSCCE-EEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSE
T ss_pred ccCCeeeecC----CceEecCCCeEEEEEEEEEeCCCe-EEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeE
Confidence 4577766655 345788999999999999988876 999999988854211111112 25799999998 99999
Q ss_pred EEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCC
Q psy3823 190 YACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPR 269 (365)
Q Consensus 190 Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~ 269 (365)
|+|.+.|..|... ..+.|.|...... ....|.+...+.. ..+..|+.+.|.|.+.+.|.+. +.|++++......
T Consensus 79 Y~C~a~n~~g~~~-~~~~l~V~~~~~~---p~~~p~i~~~~~~-~~v~~g~~v~l~C~~~g~p~~~-v~W~k~~~~~~~~ 152 (304)
T 2yd9_A 79 YECVAQNSVGEIT-VHAKLTVLREDQL---PSGFPNIDMGPQL-KVVERTRTATMLCAASGNPDPE-ITWFKDFLPVDPS 152 (304)
T ss_dssp EEEEEECSSCEEC-CEEEEEEECGGGC---CTTCCEEEECCCC-EEEETTSCEEECCEEECSSCCE-EEEEETTEECCGG
T ss_pred EEEEEECCCCeEE-EEEEEEEeccccC---CCCCCeeecCCcc-EEEeCCCeEEEEEECccCCCCe-EEEEECCEECcCC
Confidence 9999999988643 6778888721000 0011444433333 3378899999999999999998 9999988654332
Q ss_pred CCcee--EeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceec-EEEEE
Q psy3823 270 PLTSY--SIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTP-CTFHV 316 (365)
Q Consensus 270 ~~~~~--~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~v 316 (365)
....+ ...++ .|.|.+++.+|+|.|+|.|.|..|..... ..+.|
T Consensus 153 ~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v 199 (304)
T 2yd9_A 153 ASNGRIKQLRSG---ALQIESSEETDQGKYECVATNSAGVRYSSPANLYV 199 (304)
T ss_dssp GGTTSEEECTTS---CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCcceEEeCCCe---EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEE
Confidence 21111 12222 59999999999999999999999976533 45544
No 102
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.89 E-value=9.5e-21 Score=178.85 Aligned_cols=268 Identities=13% Similarity=0.170 Sum_probs=162.7
Q ss_pred cCCcEEEEEEeCCC-CCcceEEEEeCCCcCCCCC-CceeEecCC---eEEEEEEccCCCCCCeEEEEEEEeCCCCCcccE
Q psy3823 26 RNEQVLVSCTVDAN-PQAQYFTWAFNNSGTAPRP-LTSYSIQDG---STSVARYTPTSELEYGTLLCWARNEQGNQRTPC 100 (365)
Q Consensus 26 ~G~~~~l~C~~~~~-p~~~~v~W~~~~~~~l~~~-~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~~ 100 (365)
+|+.++|.|.+.+. |.+..++|++++.. .... .......++ ..+.|.|.+...+ .|.|+|.|.|..+......
T Consensus 149 ~~~~v~L~C~~~g~~P~p~~v~W~~~~~~-~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~ 226 (512)
T 1zvo_C 149 DNSPVVLACLITGYHPTSVTVTWYMGTQS-QPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEI 226 (512)
T ss_pred CCCeEEEEEEEEeeecCceEEEEEcCccc-CceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEE
Confidence 47899999996555 65338999997543 2110 010111122 2346888888777 9999999999887654322
Q ss_pred -----------EEEEE-ec------------------------------------------cccCCCCCCCeEEEEcCCc
Q psy3823 101 -----------TFHVV-KA------------------------------------------GECEHPVDKPSVQIKLGRN 126 (365)
Q Consensus 101 -----------~l~V~-~~------------------------------------------~~~~~~~~~p~~~~~~~~~ 126 (365)
.+.+. ++ .+|.....+|.+.+.+..
T Consensus 227 ~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~- 305 (512)
T 1zvo_C 227 FRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPA- 305 (512)
T ss_pred ecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCC-
Confidence 23331 00 000011235665554432
Q ss_pred cCccceecCCcEEEEEEEEec-CCCCeeEEEeCCeEEeeCCC--------CceEEeeceEEEeeecCCCCeEEEEEEEcC
Q psy3823 127 LNASVLNEGVDIYFDCHIQAN-PPYKKLIWTHNGITISNNAS--------AGRIITNQTLVLQSVTRHSGGLYACSAINS 197 (365)
Q Consensus 127 ~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~~~~l~~~~~--------~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 197 (365)
...+.+|+.++|.|.+.+. |+...|.|+++|..+..... .+.....+.|.|.....+|+|.|+|.|.|.
T Consensus 306 --~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~ 383 (512)
T 1zvo_C 306 --VQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHP 383 (512)
T ss_pred --hHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeC
Confidence 2246689999999999985 43446999999987651110 111122356889999999999999999998
Q ss_pred CCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEE-EEEEEeeeCCCc-eeEEEeCCCCCCCCCC---c
Q psy3823 198 QGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVL-VSCTVDANPQAQ-YFTWAFNNSDTAPRPL---T 272 (365)
Q Consensus 198 ~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~-l~C~~~~~p~~~-~~~W~~~~~~~~~~~~---~ 272 (365)
.+......+...... ....+|.+...... . .|+.+. |.|.+.|++++. .+.|+++|........ .
T Consensus 384 ~~~~~~~~~~~~~~~------~~~~~p~v~~~~~~---~-~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~ 453 (512)
T 1zvo_C 384 SLPPQRLMALREPAA------QAPVKLSLNLLASS---D-PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPAR 453 (512)
T ss_pred CCCCCceeEEeecCC------CCCCCCEEEEEccC---c-CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccc
Confidence 765431222111100 00134554432222 1 688899 999999865443 5899999875433211 1
Q ss_pred eeEeeCCC----EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 273 SYSIQDGS----TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 273 ~~~~~~~~----~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
.....++. .+.|.|.....+|.|.|+|.|.|.....
T Consensus 454 ~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~ 493 (512)
T 1zvo_C 454 PPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRT 493 (512)
T ss_pred eeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCC
Confidence 11223443 2567777777778999999999987553
No 103
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.89 E-value=8.2e-23 Score=166.85 Aligned_cols=175 Identities=19% Similarity=0.294 Sum_probs=125.1
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCC--ceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPL--TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQ 96 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~ 96 (365)
+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +.... ......++ .|.|.+++.+|+|.|+|.+.+..+..
T Consensus 9 ~~~~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~~~~~~~ 83 (189)
T 2v5t_A 9 VSPQEFKQGEDAEVVCRVSSSPAP-AVSWLYHNEE-VTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGE 83 (189)
T ss_dssp CSSEEEETTSCEEECCEEECSSCC-EEEEEC------CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTE
T ss_pred CCCEEEeCCCcEEEEEEEcCCCCC-EEEEEECCcc-ceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEEEEEcCCCc
Confidence 344568999999999998788888 9999999987 54322 22222344 69999999999999999999877544
Q ss_pred c--ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEee
Q psy3823 97 R--TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITN 174 (365)
Q Consensus 97 ~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~ 174 (365)
. ..+.+.| ..+|.+...... ....+.+|+.+.|.|.+.+.|.+. +.|+++|..+...........+
T Consensus 84 ~~~~~~~l~v---------~~~p~~~~~~~~--~~~~~~~g~~v~l~C~~~g~p~~~-v~W~~~g~~~~~~~~~~~~~~~ 151 (189)
T 2v5t_A 84 IDFRDIIVIV---------NVPPAISMPQKS--FNATAERGEEMTFSCRASGSPEPA-ISWFRNGKLIEENEKYILKGSN 151 (189)
T ss_dssp EEEEEEEEEE---------EEEEEEECSCCE--EEEETTSCCCEEEECEEEEESCCE-EEEEETTEECCCSSSEEEETTT
T ss_pred eEEEEEEEEe---------cCCCCccccccc--ccccccCCCcEEEEEEEccCCCCe-EEEEECCEECcCCCcEEEecCC
Confidence 3 4455655 334544322111 123567899999999999988886 9999999988754332222235
Q ss_pred ceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 175 QTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 175 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
..|.|.++..+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 152 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~ 187 (189)
T 2v5t_A 152 TELTVRNIINSDGGPYVCRATNKAGEDE-KQAFLQVF 187 (189)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEE-EEEEEEEE
T ss_pred CEEEEcCCChhhCeeEEEEEEeCCCcee-EEEEEEEE
Confidence 6899999999999999999999988655 45666664
No 104
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.89 E-value=4.1e-22 Score=165.12 Aligned_cols=160 Identities=19% Similarity=0.248 Sum_probs=125.4
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRT 98 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~ 98 (365)
+....+.+|+.++|.|.+.+.|.+..+.|++++.. +.... ..|.|.+++.+|+|.|+|.+.+. ....
T Consensus 14 p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~-l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n~--~~s~ 80 (204)
T 3sgj_C 14 PQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESL-ISSQA----------SSYFIDAATVDDSGEYRCQTQLS--TLSD 80 (204)
T ss_dssp SCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEE-ESCCS----------SEEEESSCCGGGCEEEEEEETTS--BCCC
T ss_pred CCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEE-cccCc----------cEEEEecccccCCEEEEEEeCCC--cccc
Confidence 34466889999999999888887735999999987 54332 38999999999999999999863 3446
Q ss_pred cEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEE
Q psy3823 99 PCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLV 178 (365)
Q Consensus 99 ~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~ 178 (365)
.+.|.| ..+|.+... ....+.+|+.++|.|.+.+.++...+.|+++|..+.. ...+..|.
T Consensus 81 ~~~l~V---------~~~p~~~~~-----~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~------~~~~~~L~ 140 (204)
T 3sgj_C 81 PVQLEV---------HIGWLLLQA-----PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY------FHHNSDFY 140 (204)
T ss_dssp CEEEEE---------ECSSEEEEC-----SCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE------EEECCCEE
T ss_pred cEEEEE---------ecCceEecC-----CceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec------ccCCceEE
Confidence 788888 455654332 2246789999999999987655555999999998753 23457899
Q ss_pred EeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 179 LQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 179 i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
|.+++.+|+|.|+|.+.|..+...+..+.|.|.
T Consensus 141 i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (204)
T 3sgj_C 141 IPKATLKDSGSYFCRGLVGSKNVSSETVQITIT 173 (204)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred ECcCCcccCEEEEEEEEeCCCceecCcEEEEEe
Confidence 999999999999999999655555577888887
No 105
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.89 E-value=1.3e-21 Score=159.12 Aligned_cols=167 Identities=15% Similarity=0.300 Sum_probs=127.9
Q ss_pred ceecCCcEEEEEEEEecCCCC-eeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEE
Q psy3823 131 VLNEGVDIYFDCHIQANPPYK-KLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLN 209 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~p~~~-~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~ 209 (365)
.+.+|+.++|.|.+.+.+.+. .+.|++++..+....... ....|.|. +.+|+|.|+|.+.|. ....+.|.
T Consensus 9 ~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~---~~~~l~i~--~~~d~G~Y~C~~~n~----~~~~~~l~ 79 (184)
T 3b5h_A 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG---QKTEFKVD--SDDQWGEYSCVFLPE----PMGTANIQ 79 (184)
T ss_dssp EEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC---SEEEEEEC--GGGCCEEEEEEEEST----TSCEEEEE
T ss_pred EEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC---CcEEEEEe--chhhCeEEEEEEECC----cCcEEEEE
Confidence 578999999999999876652 499999999887543221 13345555 689999999999982 22567888
Q ss_pred EeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeC-CCceeEEEe---CCCCCCCCC--CceeEeeCCCEEE
Q psy3823 210 INKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANP-QAQYFTWAF---NNSDTAPRP--LTSYSIQDGSTSV 283 (365)
Q Consensus 210 v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~~W~~---~~~~~~~~~--~~~~~~~~~~~s~ 283 (365)
|. .+|.+....... .+..|+.+.|.|.+.+.| .+. +.|++ ++....... .++.+..++..+.
T Consensus 80 V~----------~~P~~~~~~~~~-~~~~g~~~~l~C~~~g~p~~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (184)
T 3b5h_A 80 LH----------GPPRVKAVKSSE-HINEGETAMLVCKSESVPPVTD-WAWYKITDSEDKALMNGSESRFFVSSSQGRSE 147 (184)
T ss_dssp EC----------CSCCCEESCSEE-EECTTSCEEEEEECCCSSCCCE-EEEEECCSSSCEECCTTGGGTEEEEEETTEEE
T ss_pred Ee----------cCCceeecCCCc-EEcCCCcEEEEEEECCCCCCCe-EEEEEcCCCCCEEeecCCCCEEEEEecCCeeE
Confidence 88 888877655333 388999999999999999 677 99999 454332222 3344555666778
Q ss_pred EEEcCCC-cccCeEEEEEEEcCCccceecEEEEEEc
Q psy3823 284 ARYTPTS-ELEYGTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 284 l~i~~v~-~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
|.|.+++ .+|+|.|+|.|.|..|.....+.|.|..
T Consensus 148 L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 148 LHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp EEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EEEeeccccccCceEEEEEEeCCCcceEEEEEEEec
Confidence 9999999 8999999999999999998888887753
No 106
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.89 E-value=6.1e-22 Score=159.95 Aligned_cols=162 Identities=18% Similarity=0.250 Sum_probs=125.5
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCC
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQ 96 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~ 96 (365)
.++....+.+|+.++|.|.+.+.|.+..+.|++++.. +.. .+. .|.|.+++.+|+|.|+|.+.+..+
T Consensus 12 ~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~-~~~-------~~~---~L~i~~~~~~d~G~Y~C~~~n~~~-- 78 (175)
T 1fnl_A 12 LEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESL-ISS-------QAS---SYFIDAATVNDSGEYRCQTNLSTL-- 78 (175)
T ss_dssp EESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEE-EES-------SCS---EEEESSCCGGGCEEEEEECSSSCC--
T ss_pred EcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEE-ccC-------Cce---EEEEeCCCcccCEEEEEEeeCCcc--
Confidence 3444457889999999999888887735899999877 442 223 899999999999999999987433
Q ss_pred cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeece
Q psy3823 97 RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQT 176 (365)
Q Consensus 97 ~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~ 176 (365)
...+.|.| ..+|. .+.. ....+.+|+.+.|.|.+.+.+++..+.|+++|..+.. ......
T Consensus 79 s~~~~l~V---------~~~~~-~~~~----~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~------~~~~~~ 138 (175)
T 1fnl_A 79 SDPVQLEV---------HIGWL-LLQA----PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY------FHHNSD 138 (175)
T ss_dssp CCCEEEEE---------ECSSE-EEEC----SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE------EEECCC
T ss_pred cccEEEEE---------eCCCc-eeeC----CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC------CCCCCE
Confidence 46788888 33343 3333 2235789999999999998777655999999998853 234678
Q ss_pred EEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 177 LVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 177 l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
|.|.+++.+|+|.|+|.|.|..+...+..+.|.|.
T Consensus 139 L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 139 FHIPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEcccChhhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 99999999999999999999877655577778776
No 107
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.89 E-value=8e-23 Score=170.09 Aligned_cols=191 Identities=16% Similarity=0.292 Sum_probs=136.3
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCc-----eeEecCCeEE--EEEEccCCCCCCe
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLT-----SYSIQDGSTS--VARYTPTSELEYG 83 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~-----~~~~~~~~~~--~l~i~~~~~~d~G 83 (365)
+|.+ ...+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +..... .....++... .|.|.+++.+|+|
T Consensus 9 pp~i-~~~p~~~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 85 (212)
T 2v9r_A 9 PPRI-VEHPSDLIVSKGEPATLNCKAEGRPTP-TIEWYKGGER-VETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (212)
T ss_dssp EEEE-EECCCCEEECTTCCEEECCEEEEESCC-EEEEEETTEE-CCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCE
T ss_pred Ccce-ecCCCceEEeCCCcEEEEEEcCCCCCC-EEEEEECCEE-eeccccccccceEEecCCcEEEEEEEecCCCcccCe
Confidence 3443 344556778999999999998788999 9999999887 543321 1222333322 3455678999999
Q ss_pred EEEEEEEeCCCCC-cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEE-EecCCCCeeEEEeCCeE
Q psy3823 84 TLLCWARNEQGNQ-RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI-QANPPYKKLIWTHNGIT 161 (365)
Q Consensus 84 ~Y~C~a~~~~~~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~i~W~~~~~~ 161 (365)
.|+|.+.+..+.. ...+.|.|.. .+|.+...+ ....+.+|+.+.|.|.+ .+.|.+. +.|++++..
T Consensus 86 ~Y~C~~~n~~g~~~~~~~~l~V~~--------~~~~~~~~~----~~~~~~~g~~~~l~C~~~~~~p~~~-v~W~~~~~~ 152 (212)
T 2v9r_A 86 VYVCVARNYLGEAVSHDASLEVAI--------LRDDFRQNP----SDVMVAVGEPAVMECQPPRGHPEPT-ISWKKDGSP 152 (212)
T ss_dssp EEEEEEEETTEEEECCCEEEEECE--------ECSSCSBCC----CCEEEETTSCEEEECBCCCEESCCE-EEEEETTEE
T ss_pred EEEEEEECCCCceeecceEEEEEe--------ccccceeCC----CceEecCCCcEEEEEecCCCCCCCE-EEEEECCcc
Confidence 9999999987765 3667777721 122222211 23467899999999998 7888876 999999999
Q ss_pred EeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceec
Q psy3823 162 ISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQ 228 (365)
Q Consensus 162 l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~ 228 (365)
+.... ......++.|.|.++...|+|.|+|.+.|..|...+..+.|.|. .+|.+..
T Consensus 153 l~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~----------~~P~~~~ 208 (212)
T 2v9r_A 153 LDDKD-ERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVL----------ERPSFVK 208 (212)
T ss_dssp ECTTS-TTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE----------C------
T ss_pred CCCCc-ceEEccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEE----------eCchHhh
Confidence 87533 23455678999999999999999999999998766566889998 7887654
No 108
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.89 E-value=1.1e-21 Score=160.60 Aligned_cols=179 Identities=17% Similarity=0.292 Sum_probs=134.6
Q ss_pred CeEeeC-CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEE
Q psy3823 12 PVCKQS-QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR 90 (365)
Q Consensus 12 p~~~~~-~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 90 (365)
|.+... .+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +..........+. ..|.|.+++.+|+|.|+|.+.
T Consensus 3 P~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~ 78 (192)
T 2va4_A 3 PAISMPQKSFNATAERGEEMTFSCRASGSPEP-AISWFRNGKL-IEENEKYILKGSN--TELTVRNIINSDGGPYVCRAT 78 (192)
T ss_dssp CEEECSCCEEEEETTSCCCEEEECEEECSSCC-EEEEEETTEE-CCCSSSEEEETTT--TEEEECSCCGGGCEEEEEEEE
T ss_pred CcccCCCCCcEEEEecCCCEEEEEeeccCCCC-eEEEEECCeE-cCCCccEEEeCCe--eEEEEecCChhcCcEEEEEEE
Confidence 444332 3456778999999999998888988 9999999988 6655443333222 279999999999999999999
Q ss_pred eCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeC--CeEEeeCC--
Q psy3823 91 NEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHN--GITISNNA-- 166 (365)
Q Consensus 91 ~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~--~~~l~~~~-- 166 (365)
+..+.....+.|.| ..+|.+.... ...+.+|+.+.|.|.+.+.|.+. +.|+++ +..+....
T Consensus 79 ~~~~~~~~~~~l~V---------~~~p~~~~~~-----~~~~~~g~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~ 143 (192)
T 2va4_A 79 NKAGEDEKQAFLQV---------FVQPHIIQLK-----NETTYENGQVTLVCDAEGEPIPE-ITWKRAVDGFTFTEGDKS 143 (192)
T ss_dssp ETTEEEEEEEEEEE---------EEEEEEEEEC-----CEEECTTSEEEEEEEEEEESCCE-EEEEETTTTEEECTTCBC
T ss_pred ccccccceEEEEEE---------EccCcccccC-----cceEEeCCeEEEEEEecCCCCCc-EEEEeCCCCceeeccccc
Confidence 98877777788888 5566654432 23567899999999999998887 999998 66654311
Q ss_pred -CCceEEe----eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEE
Q psy3823 167 -SAGRIIT----NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNI 210 (365)
Q Consensus 167 -~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v 210 (365)
....... ...|.|.++..+|+|.|+|.|.|..|... ..+.|.|
T Consensus 144 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V 191 (192)
T 2va4_A 144 LDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQ-KSMYLDI 191 (192)
T ss_dssp TTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEE-EEEEEEE
T ss_pred cCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceE-EEEEEEe
Confidence 1112221 36899999999999999999999998744 5666665
No 109
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.88 E-value=5.7e-23 Score=169.83 Aligned_cols=167 Identities=16% Similarity=0.144 Sum_probs=119.5
Q ss_pred cceecCCcEEEEEEE---EecCCCCeeEEEeCCeEEee------CC---------CCce--EE--eeceEEEeeecCCCC
Q psy3823 130 SVLNEGVDIYFDCHI---QANPPYKKLIWTHNGITISN------NA---------SAGR--II--TNQTLVLQSVTRHSG 187 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~---~~~p~~~~i~W~~~~~~l~~------~~---------~~~~--~~--~~~~l~i~~~~~~d~ 187 (365)
+.+..|+.++|.|.. .+.|.+. +.|+++|..+.. .. .... .. ....|.|.+++..|+
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~-V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIE-VSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSE-EEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcE-EEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 367899999999964 4667776 999997642210 00 0001 11 135799999999999
Q ss_pred eEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCC
Q psy3823 188 GLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTA 267 (365)
Q Consensus 188 G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~ 267 (365)
|.|+|.+.|..|... ..+.|.|. .+|.+...+.. ..+.+|+.+.|.|.+.|.|.|. +.|+++++...
T Consensus 82 G~Y~C~a~n~~g~~~-~~~~l~V~----------~p~~~~~~~~~-~~v~~g~~~~l~C~~~G~P~P~-v~W~~~~~~~~ 148 (203)
T 4fa8_A 82 GNYLCRMKLGETEVT-KQEHLSVV----------KPLTLSVHSER-SQFPDFSVLTVTCTVNAFPHPH-VQWLMPEGVEP 148 (203)
T ss_dssp EEEEEEEEETTEEEE-EEEEEEEE----------EEEEEEEEEEE-CCSSCSCCEEEEEEEEEESCCE-EEECCC-----
T ss_pred eEEEEEEEcCCCcEE-EEEEEEec----------CCceeeeccee-EEEcCCCEEEEEEEcCCCCCCE-EEEEECCeeec
Confidence 999999999887655 56778887 55555443333 3378999999999999999998 99998765443
Q ss_pred CC---CCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcccee
Q psy3823 268 PR---PLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRT 310 (365)
Q Consensus 268 ~~---~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 310 (365)
.. ..+.....++....+.|.++..+|+|.|+|.|.|.+|.++.
T Consensus 149 ~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 149 APTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp -------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 22 12234456777777888899999999999999999998864
No 110
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.88 E-value=1.1e-22 Score=170.00 Aligned_cols=189 Identities=18% Similarity=0.309 Sum_probs=133.5
Q ss_pred cccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCC---ceeEecCC-eEEEEEEccCCCCCCe
Q psy3823 8 STDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPL---TSYSIQDG-STSVARYTPTSELEYG 83 (365)
Q Consensus 8 ~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~---~~~~~~~~-~~~~l~i~~~~~~d~G 83 (365)
+.+.|......+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +.... ......++ ....|.|.+++.+|+|
T Consensus 5 ~~~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~-~v~W~~~g~~-~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 82 (217)
T 2vr9_A 5 GQYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEP-TIEWFKDGEP-VSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGG 82 (217)
T ss_dssp -CCCCCEEEECCCCEEECTTSCEEECCEEECSSCC-EEEEEETTEE-CCCSSSSSSEEECTTSCEEESSCCBSSSCBCCE
T ss_pred cccCCCEEecCCCceEEeCCCcEEEEEEcCCCCCC-eEEEEECCcC-ccCCCccceeEEecCCceEEEEEeccCCcccCc
Confidence 44544444445566778999999999998788988 9999999987 65432 11222233 2223478899999999
Q ss_pred EEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEE-EecCCCCeeEEEeCCeE
Q psy3823 84 TLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI-QANPPYKKLIWTHNGIT 161 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~i~W~~~~~~ 161 (365)
.|+|.+.+..+... ..+.|.|.. .+|.+...+ ....+.+|+.+.|.|.+ .+.|.+. +.|++++..
T Consensus 83 ~Y~C~~~n~~g~~~~~~~~l~v~~--------~~~~~~~~~----~~~~~~~g~~v~l~C~~~~g~p~~~-v~W~~~g~~ 149 (217)
T 2vr9_A 83 EYWCVAKNRVGQAVSRHASLQIAV--------LRDDFRVEP----KDTRVAKGETALLECGPPKGIPEPT-LIWIKDGVP 149 (217)
T ss_dssp EEEEEEEETTEEEECCCEEEEECE--------ECCSCSBCC----CCEEECTTSCEEECCBCCCEESCCE-EEEEETTEE
T ss_pred eEEEEEecCCCccccccceEEEEE--------eCCCcEECC----CccEEcCCCeEEEEEECCCCCCCCe-EEEEECCcC
Confidence 99999999877653 566676621 133322222 23457889999999998 7888877 999999998
Q ss_pred EeeCC-------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 162 ISNNA-------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 162 l~~~~-------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
+.... .......+++|.|.+++.+|+|.|+|.|.|..|...+....|.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 150 LDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp ECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CCcccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEE
Confidence 87322 111223456899999999999999999999999766444444443
No 111
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.88 E-value=3.3e-22 Score=171.52 Aligned_cols=207 Identities=14% Similarity=0.107 Sum_probs=115.5
Q ss_pred CCCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC-----CC
Q psy3823 77 TSELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP-----YK 151 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-----~~ 151 (365)
++.+|+|.|+|.|. |.....+.+.+ ..+|.+...+ ....+.+|++++|.|.+.+.++ +.
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~---------~~~~~~~~~p----~~~~v~~G~~v~L~C~~~~~~~~~~~~~~ 74 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNW---------LRELVMTQSP----LTLSVTIGQPASISCKSSQSLLYSNGKTY 74 (254)
T ss_dssp ---------------------------------------CCCEEEEC----SEEEECTTSCEEEEEEESSCCBCSSSCBC
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhhe---------eeceeEEeCC----ceEEecCCCcEEEEeeccCcccccCCCCc
Confidence 57789999999998 33333444444 2345544433 3357889999999999988773 45
Q ss_pred eeEEEeC--CeEEe----------eCCCCceEEe----eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeee
Q psy3823 152 KLIWTHN--GITIS----------NNASAGRIIT----NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVN 215 (365)
Q Consensus 152 ~i~W~~~--~~~l~----------~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~ 215 (365)
+.|+++ +..+. .....+.... ..+|.|.+++..|+|.|+|.+.|..+........+.|..
T Consensus 75 -v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~--- 150 (254)
T 2c1o_A 75 -LNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKR--- 150 (254)
T ss_dssp -EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECC---
T ss_pred -eEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECC---
Confidence 999973 33221 0001122221 338999999999999999999987654333344566651
Q ss_pred cccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeCCCCCCCC-CCceeE--eeCCC---EEEEEEcC
Q psy3823 216 LIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNSDTAPR-PLTSYS--IQDGS---TSVARYTP 288 (365)
Q Consensus 216 ~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~-~~~~~~--~~~~~---~s~l~i~~ 288 (365)
...+|.+........ ...|+.++|.|.+.+.+++ ..+.|+++|...... ...... ..++. .+.|.|.+
T Consensus 151 ----~~~~P~v~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~ 225 (254)
T 2c1o_A 151 ----ADAAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTK 225 (254)
T ss_dssp ----CCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEH
T ss_pred ----CCCCCeeEeecCChh-hccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEecc
Confidence 012565543222212 3467899999999885433 249999998754322 011111 11222 46799999
Q ss_pred CCcccCeEEEEEEEcCCccc
Q psy3823 289 TSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 289 v~~~d~G~Y~C~a~n~~g~~ 308 (365)
+..+|+|.|+|.|.|.....
T Consensus 226 ~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 226 DEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp HHHHTCCEEEEEEECTTCSS
T ss_pred ccccCCCeEEEEEEcCCCCC
Confidence 99999999999999987654
No 112
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.88 E-value=4e-22 Score=165.94 Aligned_cols=180 Identities=13% Similarity=0.192 Sum_probs=128.3
Q ss_pred ecCCcEEEEEEeCCC-CCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcccEEEE
Q psy3823 25 LRNEQVLVSCTVDAN-PQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRTPCTFH 103 (365)
Q Consensus 25 ~~G~~~~l~C~~~~~-p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~~~l~ 103 (365)
-+|+.+.|.|.+.+. |.+ .++|++++.. +...........+....|.|.+++.+|+|.|+|.+.+..+.....+.|.
T Consensus 15 c~~~~~~l~C~~~~~~p~~-~i~W~~~g~~-i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~ 92 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDL-KVNWSHNGSA-IRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 92 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSC-EEEEEETTEE-CCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred EcCceEEEEEEEeccCCCc-eEEEEECCEE-ccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEE
Confidence 367888888886654 567 9999999988 7665554444445556799999999999999999999776655556665
Q ss_pred EEecccc-----------CCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEE
Q psy3823 104 VVKAGEC-----------EHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRII 172 (365)
Q Consensus 104 V~~~~~~-----------~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~ 172 (365)
|...... ......|.+..... ....+.+|+.+.|.|.+.|.|.+. +.|++++..+..........
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~~v~~g~~~~l~C~~~g~p~p~-v~W~~~~~~~~~~~~~~~~~ 168 (212)
T 2r15_A 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLP---DVVTIQEGKALNLTCNVWGDPPPE-VSWLKNEKALAQTDHCNLKF 168 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCC---SEEEEETTCCEEEEEEEECSSCCE-EEEEETTEEECCCSSEEEEE
T ss_pred EeeccchhhhccccCcccccccCCCcccccCC---CcEEEccCCeEEEEEEEcCCCCce-EEEEECCeECccCCCEEEEE
Confidence 4100000 00001333333221 234688999999999999998888 99999999987644322222
Q ss_pred e---eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 173 T---NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 173 ~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
. ...|.|.++...|+|.|+|.|.|..|... ..+.|.|.
T Consensus 169 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~ 209 (212)
T 2r15_A 169 EAGRTAYFTINGVSTADSGKYGLVVKNKYGSET-SDFTVSVF 209 (212)
T ss_dssp ETTTEEEEEESSCCGGGCEEEEEEEEETTEEEE-EEEEEEEE
T ss_pred cCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEE-EEEEEEEE
Confidence 2 23899999999999999999999998654 56677766
No 113
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.88 E-value=1.4e-21 Score=163.62 Aligned_cols=172 Identities=16% Similarity=0.265 Sum_probs=133.5
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCC
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQ 96 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~ 96 (365)
..+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +.... . ..|.|.+++.+|+|.|+|.+.+..+..
T Consensus 23 ~~p~~~~v~~G~~v~L~C~~~~~p~~-~v~W~~~~~~-~~~~~------~---~~L~i~~v~~~d~G~Y~C~~~n~~~~~ 91 (218)
T 3k0w_A 23 VNPESKAVLAGQFVKLCCRATGHPFV-QYQWFKMNKE-IPNGN------T---SELIFNAVHVKDAGFYVCRVNNNFTFE 91 (218)
T ss_dssp ECCCCEEEETTSBEEEECEETTTTSS-EEEEEETTEE-CTTCC------S---SEEEETTCCGGGCEEEEEEEECTTCCE
T ss_pred ECCCCeEEeCCCcEEEEeeecCCCCC-EEEEEECCEE-CCCCC------C---CEEEEccCChhhCeEeEEEEEcCCCCc
Confidence 34566778999999999998889998 9999999987 54321 2 279999999999999999999987754
Q ss_pred -cccEEEEEEeccccC------CCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCc
Q psy3823 97 -RTPCTFHVVKAGECE------HPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAG 169 (365)
Q Consensus 97 -~~~~~l~V~~~~~~~------~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~ 169 (365)
...+.|.|....... .+..+|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+....
T Consensus 92 ~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~----~~~~v~~G~~v~L~C~~~g~p~~~-v~W~~~~~~~~~~~--- 163 (218)
T 3k0w_A 92 FSQWSQLDVCDIPESFQRSVDGVSESKLQICVEP----TSQKLMPGSTLVLQCVAVGSPIPH-YQWFKNELPLTHET--- 163 (218)
T ss_dssp ECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECC----CCEEECTTCCEEEECEEEBSSCCE-EEEEETTEECTTCC---
T ss_pred eeeEEEEEEEccCcccccccccccCCCceEEECC----CceeecCCCcEEEEEEecccCCCe-EEEEECCEECCCCC---
Confidence 366788874321100 001225554443 334678999999999999988887 99999998886432
Q ss_pred eEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 170 RIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 170 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
...|.|.+++..|+|.|+|.+.|..|...+..+.|.|.
T Consensus 164 ----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 164 ----KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp ----SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred ----CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 35899999999999999999999988766678888887
No 114
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.88 E-value=9.3e-21 Score=178.93 Aligned_cols=280 Identities=12% Similarity=0.098 Sum_probs=164.4
Q ss_pred CceEEEEecCCcEEEEEEeCCCCC----cceEEEEeCC--CcCCC------C----------CCceeEec--CCeEEEEE
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQ----AQYFTWAFNN--SGTAP------R----------PLTSYSIQ--DGSTSVAR 73 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~----~~~v~W~~~~--~~~l~------~----------~~~~~~~~--~~~~~~l~ 73 (365)
++..+.+.+|+.++|.|...+.+. . .+.|||.. .. +. . ..+..... ......|.
T Consensus 6 qp~~v~v~~G~~v~L~C~~~~~~~~~~~~-~v~W~rq~~g~~-~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 83 (512)
T 1zvo_C 6 ESGPGLVKPSETLSLTCIVSGGPIRRTGY-YWGWIRQPPGKG-LEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLN 83 (512)
T ss_pred CCCCEEEcCCCCEEEEEEEcccccCCCCe-eEEEEEeCCCCC-cEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEE
Confidence 345677899999999999655432 4 89999863 21 10 0 01111111 22346899
Q ss_pred EccCCCCCCeEEEEEEEeCCC-----------C--CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEE
Q psy3823 74 YTPTSELEYGTLLCWARNEQG-----------N--QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYF 140 (365)
Q Consensus 74 i~~~~~~d~G~Y~C~a~~~~~-----------~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l 140 (365)
|.+++.+|+|.|.|.+.+..+ . ......|+|... +..+|.+...... ......|+.++|
T Consensus 84 I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~-----~~~~P~i~~~~~~---~~~~~~~~~v~L 155 (512)
T 1zvo_C 84 LRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSA-----PTKAPDVFPIISG---CRHPKDNSPVVL 155 (512)
T ss_pred ECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEeccc-----CCcCCeEEeccCC---cccccCCCeEEE
Confidence 999999999999999987642 1 114467777311 1134554422111 010224689999
Q ss_pred EEEEEec-CCCCeeEEEeCCeEEeeCCC------CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCccc--------
Q psy3823 141 DCHIQAN-PPYKKLIWTHNGITISNNAS------AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTP-------- 205 (365)
Q Consensus 141 ~C~~~~~-p~~~~i~W~~~~~~l~~~~~------~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~-------- 205 (365)
.|.+.+. |.+..+.|++++........ .+.....+.|.|.....+ .|.|+|.+.|..+......
T Consensus 156 ~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~ 234 (512)
T 1zvo_C 156 ACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPK 234 (512)
T ss_pred EEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCC
Confidence 9999986 55545999996543210000 111122346888877777 9999999999887543111
Q ss_pred --EEEEEeeeee---cc---------------------------------------cccCCCCceecCccceeeeecCce
Q psy3823 206 --FDLNINKMVN---LI---------------------------------------FNSIDEPVCKQSQQRIYGALRNEQ 241 (365)
Q Consensus 206 --~~l~v~~~~~---~~---------------------------------------~~~~~~p~~~~~~~~~~~~~~g~~ 241 (365)
+.+.+..+.. .+ .....+|.+....+....+..|+.
T Consensus 235 ~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~ 314 (512)
T 1zvo_C 235 AQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDK 314 (512)
T ss_pred cCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCc
Confidence 1223320000 00 000123333222211112567999
Q ss_pred EEEEEEEeeeCC-CceeEEEeCCCCCCCCCC--ceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 242 VLVSCTVDANPQ-AQYFTWAFNNSDTAPRPL--TSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 242 ~~l~C~~~~~p~-~~~~~W~~~~~~~~~~~~--~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
++|.|.+.+.++ ...+.|+++|........ ......++. .+.|.|..+..+|.|.|+|.|.|..+..
T Consensus 315 ~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~ 387 (512)
T 1zvo_C 315 ATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPP 387 (512)
T ss_pred eEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCC
Confidence 999999988643 335999999875321111 111122332 3569999999999999999999998764
No 115
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.88 E-value=6.8e-22 Score=162.73 Aligned_cols=185 Identities=15% Similarity=0.192 Sum_probs=127.9
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCc-eEEeeceEEEeeecCCCCeEEEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAG-RIITNQTLVLQSVTRHSGGLYAC 192 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C 192 (365)
..+|.+...+.. .+.+|++++|.|.+.+ +.+. +.|++++..+....... .......|.|.+++..|+|.|+|
T Consensus 3 ~~~P~i~~~p~~-----~v~~G~~v~L~C~~~~-~~~~-~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 75 (196)
T 3p2t_A 3 LPKPTLWAEPGS-----VISWGNSVTIWCQGTL-EARE-YRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRC 75 (196)
T ss_dssp BCCCEEEEESCS-----EEETTCCEEEEEECCT-TCCE-EEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCCEEEccCCC-----cCCCCCcEEEEeeCCC-CCCE-EEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEE
Confidence 447777766532 6889999999999887 5454 99999988764311110 11235789999999999999999
Q ss_pred EEEcCCC-CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCC
Q psy3823 193 SAINSQG-EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPL 271 (365)
Q Consensus 193 ~~~~~~~-~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~ 271 (365)
.+.|..+ ...+..+.|.|.. ...+|.+...+.. .+.+|+.++|.|.+.+. ++. +.|+++|........
T Consensus 76 ~a~n~~g~~~~s~~~~l~V~~-------~~~~p~~~~~~~~--~v~~G~~v~L~C~~~~~-~~~-~~w~k~g~~~~~~~~ 144 (196)
T 3p2t_A 76 YYRSPVGWSQPSDPLELVMTG-------AYSKPTLSALPSP--LVTSGKSVTLLCQSRSP-MDT-FLLCKERAAHPLLCL 144 (196)
T ss_dssp EEEETTEEBCCCCCEEEEEEC-------SSCCCEEEEESCS--EECTTCCEEEEEEEEEE-EEE-EEEEETTCCCGGGSE
T ss_pred EEeCCCcccCCCccEEEEecC-------CCCCCEEEeCCcc--eecCCCeEEEEEecCCC-CCE-EEEEeCCCcccceee
Confidence 9999987 3445677888861 0124444433322 37899999999999874 455 999998864432221
Q ss_pred ceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCc-----cceecEEEEE
Q psy3823 272 TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG-----SQRTPCTFHV 316 (365)
Q Consensus 272 ~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v 316 (365)
............|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|
T Consensus 145 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 194 (196)
T 3p2t_A 145 RSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIV 194 (196)
T ss_dssp EEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEE
T ss_pred cccccccCcceEEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEe
Confidence 11111222345699999999999999999999986 2344555554
No 116
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.88 E-value=2.2e-21 Score=159.62 Aligned_cols=172 Identities=15% Similarity=0.197 Sum_probs=124.9
Q ss_pred EEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCC--CcccE
Q psy3823 23 GALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGN--QRTPC 100 (365)
Q Consensus 23 ~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~--~~~~~ 100 (365)
.+.+|++++|.|.+.+ |.+ .+.|+|++.. +..... ..........|.|.+++.+|+|.|+|.|.|..+. ....+
T Consensus 15 ~v~~G~~v~L~C~~~~-~~~-~~~w~k~g~~-~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~ 90 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTL-EAR-EYRLDKEESP-APWDRQ-NPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPL 90 (196)
T ss_dssp EEETTCCEEEEEECCT-TCC-EEEEEETTSC-SCSEEE-CCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCE
T ss_pred cCCCCCcEEEEeeCCC-CCC-EEEEEECCCC-Cccccc-ccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccE
Confidence 6789999999999876 667 9999999987 543211 1112234568999999999999999999998873 34677
Q ss_pred EEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCc---eEEeeceE
Q psy3823 101 TFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAG---RIITNQTL 177 (365)
Q Consensus 101 ~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~---~~~~~~~l 177 (365)
.|.|... ..+|.+...+. ..+.+|+.++|.|.+.+.+ +. +.|+++|..+....... .......|
T Consensus 91 ~l~V~~~------~~~p~~~~~~~-----~~v~~G~~v~L~C~~~~~~-~~-~~w~k~g~~~~~~~~~~~~~~~~~~~~L 157 (196)
T 3p2t_A 91 ELVMTGA------YSKPTLSALPS-----PLVTSGKSVTLLCQSRSPM-DT-FLLCKERAAHPLLCLRSEHGAQQHQAEF 157 (196)
T ss_dssp EEEEECS------SCCCEEEEESC-----SEECTTCCEEEEEEEEEEE-EE-EEEEETTCCCGGGSEEEEEEEEEEEEEE
T ss_pred EEEecCC------CCCCEEEeCCc-----ceecCCCeEEEEEecCCCC-CE-EEEEeCCCcccceeecccccccCcceEE
Confidence 8887311 23566655442 2578999999999998743 34 99999998664322111 12236789
Q ss_pred EEeeecCCCCeEEEEEEEcCCC----CCCcccEEEEEe
Q psy3823 178 VLQSVTRHSGGLYACSAINSQG----EGGSTPFDLNIN 211 (365)
Q Consensus 178 ~i~~~~~~d~G~Y~C~~~~~~~----~~~s~~~~l~v~ 211 (365)
.|.+++.+|+|.|+|.|.|..+ ...+..+.|.|.
T Consensus 158 ~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 158 PMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp EECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred EeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 9999999999999999999876 344556666653
No 117
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.88 E-value=8.8e-22 Score=163.09 Aligned_cols=168 Identities=15% Similarity=0.198 Sum_probs=128.4
Q ss_pred CCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEE
Q psy3823 115 DKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSA 194 (365)
Q Consensus 115 ~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 194 (365)
.+|.+.+.+.. ..+.+|+.+.|.|.+.+.|.+..+.|+++|..+... ...|.|.+++.+|+|.|+|.+
T Consensus 6 p~p~i~~~p~~----~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~--------~~~L~i~~v~~~D~G~Y~C~a 73 (204)
T 3sgj_C 6 PKAVVFLEPQW----YRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ--------ASSYFIDAATVDDSGEYRCQT 73 (204)
T ss_dssp CBCEEEEESCC----SEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC--------SSEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEEEcCCC----eEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC--------ccEEEEecccccCCEEEEEEe
Confidence 46677776632 468899999999999998877669999999988642 278999999999999999999
Q ss_pred EcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCCCCCCCCCCce
Q psy3823 195 INSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSDTAPRPLTS 273 (365)
Q Consensus 195 ~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~~~~~~~~~~ 273 (365)
.|.. .+..+.|.|. ..|.+...+. ..+.+|+.++|.|.+.+. |.+. +.|+++|....
T Consensus 74 ~n~~---~s~~~~l~V~----------~~p~~~~~~~--~~v~~G~~v~L~C~~~~~~p~~~-v~W~k~g~~~~------ 131 (204)
T 3sgj_C 74 QLST---LSDPVQLEVH----------IGWLLLQAPR--WVFKEEDPIHLRCHSWKNTALHK-VTYLQNGKGRK------ 131 (204)
T ss_dssp TTSB---CCCCEEEEEE----------CSSEEEECSC--SEEETTCCEEEEEEEGGGCCCEE-EEEEETTEEEE------
T ss_pred CCCc---ccccEEEEEe----------cCceEecCCc--eeEeCCCcEEEEEEecCCCCCce-EEEEECCcEee------
Confidence 8742 3356788888 7776554433 237899999999999766 4566 99999876421
Q ss_pred eEeeCCCEEEEEEcCCCcccCeEEEEEEEc-CCccceecEEEEEEcC
Q psy3823 274 YSIQDGSTSVARYTPTSELEYGTLLCWARN-EQGSQRTPCTFHVVKA 319 (365)
Q Consensus 274 ~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n-~~g~~~~~~~l~v~~~ 319 (365)
. ......|.|.+++.+|+|.|+|.|.| ..+..+..+.|.|..+
T Consensus 132 -~--~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (204)
T 3sgj_C 132 -Y--FHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQG 175 (204)
T ss_dssp -E--EEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred -c--ccCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCc
Confidence 1 11123599999999999999999999 4456677788888644
No 118
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.88 E-value=3.6e-22 Score=166.08 Aligned_cols=177 Identities=16% Similarity=0.305 Sum_probs=129.7
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCCeEEe----------eCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNGITIS----------NNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~----------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
..+.+|+.+.|.|.+.+.|.+. +.|++++..+. .....+.......|.|.+++..|+|.|+|.+.+..|
T Consensus 11 ~~v~~G~~v~L~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~g 89 (212)
T 1f97_A 11 VQVPENESIKLTCTYSGFSSPR-VEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGG 89 (212)
T ss_dssp EEEETTCCEEEECEEESCSSEE-EEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEEETTS
T ss_pred eEEEcCCCEEEEeEeCCCCCcE-EEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEEEEccCC
Confidence 4678999999999999877766 99999765531 112233445568999999999999999999999876
Q ss_pred CC-CcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEE-EeeeCCCceeEEEeCCC-CCCCCCCc----
Q psy3823 200 EG-GSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCT-VDANPQAQYFTWAFNNS-DTAPRPLT---- 272 (365)
Q Consensus 200 ~~-~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~-~~~~p~~~~~~W~~~~~-~~~~~~~~---- 272 (365)
.. .+..+.|.|. .+|.+....... .+..|+.+.|.|. +.+.|.+. +.|++++. ........
T Consensus 90 ~~~~~~~~~l~V~----------~~p~~~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~-i~W~~~~~~~l~~~~~~~~~~ 157 (212)
T 1f97_A 90 QNYGEVSIHLTVL----------VPPSKPTISVPS-SVTIGNRAVLTCSEHDGSPPSE-YSWFKDGISMLTADAKKTRAF 157 (212)
T ss_dssp SSEEEEEEEEEEE----------BCCCCCEEECCS-EEETTSCEEEEEECSCCBSCCE-EEEEETTEESBC-----CBSC
T ss_pred CcccEEEEEEEEE----------cCCCCcccCCcc-ccCCCCeEEEEEEcccCcCCCE-EEEEeCCcccccccccccccc
Confidence 32 2356778887 666654333222 3789999999999 68899998 99999987 54332211
Q ss_pred --eeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccc--eecEEEEEEcC
Q psy3823 273 --SYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQ--RTPCTFHVVKA 319 (365)
Q Consensus 273 --~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~--~~~~~l~v~~~ 319 (365)
..+........|.|.++..+|+|.|+|.|.|..|.. +..+.|.|...
T Consensus 158 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~~ 208 (212)
T 1f97_A 158 MNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVEL 208 (212)
T ss_dssp SSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEESS
T ss_pred cCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEEe
Confidence 111222333469999999999999999999999988 66677777643
No 119
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.88 E-value=1.2e-21 Score=166.41 Aligned_cols=182 Identities=21% Similarity=0.289 Sum_probs=131.5
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCC---ceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASA---GRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPF 206 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~---~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~ 206 (365)
..+.+|+.+.|.|.+.+.|.+. +.|++++..+...... .......+|.|.+++..|+|.|+|.+.+..+... ..+
T Consensus 25 ~~v~~G~~v~L~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~-~~~ 102 (241)
T 3grw_A 25 LAVPAANTVRFRCPAAGNPTPS-ISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIR-QTY 102 (241)
T ss_dssp EEEETTSEEEEECCEECSSCCE-EEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEE-EEE
T ss_pred eEEcCCCeEEEEEEecCCCCce-eEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceE-EEE
Confidence 4678999999999999988776 9999999988654332 1222356899999999999999999999877544 556
Q ss_pred EEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEe----CCCCCCCCCCceeE-------
Q psy3823 207 DLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAF----NNSDTAPRPLTSYS------- 275 (365)
Q Consensus 207 ~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~----~~~~~~~~~~~~~~------- 275 (365)
.+.|... ....|.+.........+..|+.+.|.|.+.+.|.+. +.|++ ++............
T Consensus 103 ~l~V~~~------~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~-v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~ 175 (241)
T 3grw_A 103 TLDVLER------SPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPH-IQWLKHVEVNGSKVGPDGTPYVTVLKSWIS 175 (241)
T ss_dssp EEEEECC------CCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCE-EEEEEECCSSSCSSCTTTCCCEEEEEEEEC
T ss_pred EEEEecc------CCCCceeecCCCccceecCCCEEEEEEEEecCCCCE-EEEEEcccCCCcccCCCCceeeeeeeEeee
Confidence 7777610 001233333222333378899999999999999997 99999 66544332221111
Q ss_pred eeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCc
Q psy3823 276 IQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 276 ~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 320 (365)
......+.|.|.++..+|+|.|+|.|.|..|..+.++.|.|..++
T Consensus 176 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p 220 (241)
T 3grw_A 176 ESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPR 220 (241)
T ss_dssp SBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC----
T ss_pred eecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCC
Confidence 111235679999999999999999999999999999999887554
No 120
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.88 E-value=8.9e-22 Score=163.37 Aligned_cols=177 Identities=12% Similarity=0.122 Sum_probs=124.1
Q ss_pred cceecCCcEEEEEEEEe-cCCCCeeEEEeCCeEEeeCCCCceEEe----eceEEEeeecCCCCeEEEEEEEcCCCCCCcc
Q psy3823 130 SVLNEGVDIYFDCHIQA-NPPYKKLIWTHNGITISNNASAGRIIT----NQTLVLQSVTRHSGGLYACSAINSQGEGGST 204 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~~~~l~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~ 204 (365)
..+.+|+.+.|.|.+.+ .|.+. ++|++||.++.......+... ..+|.|.+++.+|+|.|+|.+.| |... .
T Consensus 12 ~~v~eg~~v~l~c~~~~~~P~p~-i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~-~ 87 (207)
T 3rbs_A 12 VEILEKGQVRFWMQAEKLSGNAK-VNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKAT-N 87 (207)
T ss_dssp EEECGGGCEEEEEECSCCCSCCE-EEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEE-E
T ss_pred eEEEeCCeEEEEEEEecCCCCCE-EEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeE-E
Confidence 36789999999999975 56666 999999999976544333332 12699999999999999999999 4332 2
Q ss_pred cEEEEEeeeee-c-----ccc-----cCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCCCCCCCCCCc
Q psy3823 205 PFDLNINKMVN-L-----IFN-----SIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSDTAPRPLT 272 (365)
Q Consensus 205 ~~~l~v~~~~~-~-----~~~-----~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~~~~~~~~~ 272 (365)
...+.+..... . ... ...+|.+.... . ..+.+|+.+.|.|.+.|. |.|. +.|+++|...... .+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~-~~v~~g~~v~l~C~v~g~~P~p~-i~W~k~g~~l~~~-~~ 163 (207)
T 3rbs_A 88 HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-S-WEVTGECNVLLKCKVANIKKETH-IVWYKDEREISVD-EK 163 (207)
T ss_dssp EEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-E-EEEETTTEEEEEEEEESCCTTCE-EEEEETTEEECCC-CC
T ss_pred EEEEEEEccchhhhcccccccccccccCCCCceEecC-C-cEEcCCCcEEEEEEEeCCCCCCE-EEEEECCEECCCC-Cc
Confidence 22222110000 0 000 00245554333 2 348899999999999998 8898 9999998754331 11
Q ss_pred eeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEE
Q psy3823 273 SYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHV 316 (365)
Q Consensus 273 ~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 316 (365)
+........|.|.+++.+|+|.|+|.|.|..|..+.++.|.+
T Consensus 164 --~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 164 --HDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp --CCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred --eEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 222333456999999999999999999999999988887754
No 121
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.88 E-value=2.8e-23 Score=186.64 Aligned_cols=203 Identities=15% Similarity=0.243 Sum_probs=148.1
Q ss_pred CCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCe
Q psy3823 81 EYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGI 160 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~ 160 (365)
+.|.|+|.+.+.. ..+.+.+ -.+|.+...+ ....+.+|+++.|.|.+.|.|.+. +.|++++.
T Consensus 136 ~~~~~~C~~~~~l----~~l~~~~---------c~~P~i~~~~----~~~~v~~G~~v~L~C~~~g~p~p~-i~W~~~~~ 197 (347)
T 2ifg_A 136 PEQKLQCHGQGPL----AHMPNAS---------CGVPTLKVQV----PNASVDVGDDVLLRCQVEGRGLEQ-AGWILTEL 197 (347)
T ss_dssp GGGCCCCSSSSCS----SCCCCTT---------CCCCEEEEEC----CSSCCBTTCCEEEEEEEECSSCCC-CCEEESCC
T ss_pred cccCCCCCCChHH----hcCCccc---------CCCCceeccC----CceEEeCCCcEEEEEEEecCCCCE-EEEEcCCc
Confidence 5688999866511 1222211 2467776665 334788999999999999988887 99999886
Q ss_pred EEeeCCCCceEEeeceEEEeeecCCCCe-EEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecC
Q psy3823 161 TISNNASAGRIITNQTLVLQSVTRHSGG-LYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRN 239 (365)
Q Consensus 161 ~l~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g 239 (365)
.+............++|.|.+++..|+| .|+|.+.|..|... ..+.|.|. .+|.+ .......|
T Consensus 198 ~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~-~~~~l~V~----------~~P~i-----~~~~~~~g 261 (347)
T 2ifg_A 198 EQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAE-VSVQVNVS----------FPASV-----QLHTAVEM 261 (347)
T ss_dssp CSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECC-EEECCCCB----------EEEEE-----EECCCEES
T ss_pred eeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCCEE-EEEEEEEc----------CCCee-----eeccCccC
Confidence 6543222223334678999999999999 99999999988664 56666776 56654 11125678
Q ss_pred ceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeE--ee-----CCCEEEEEEcCCCcccCeEEEEEEEcCCccceecE
Q psy3823 240 EQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYS--IQ-----DGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPC 312 (365)
Q Consensus 240 ~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~--~~-----~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 312 (365)
+.+.|.|.+.|.|.|. +.|+++|..... ...... .. ......|.|.+++.+|+|.|+|.|.|..|..+.++
T Consensus 262 ~~v~l~C~~~g~P~p~-i~W~~~g~~l~~-~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~ 339 (347)
T 2ifg_A 262 HHWCIPFSVDGQPAPS-LRWLFNGSVLNE-TSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 339 (347)
T ss_dssp SSEEEEEEEEEESCCE-EEEEETTEECCC-CSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEEeeecCCCc-EEEEeCCEECCC-CcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEE
Confidence 9999999999999998 999998875442 222111 11 12255699999999999999999999999999888
Q ss_pred EEEEEcC
Q psy3823 313 TFHVVKA 319 (365)
Q Consensus 313 ~l~v~~~ 319 (365)
.|.|..+
T Consensus 340 ~l~V~~~ 346 (347)
T 2ifg_A 340 MAAFMDN 346 (347)
T ss_dssp EECSCCC
T ss_pred EEEecCC
Confidence 8877644
No 122
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.88 E-value=8.4e-22 Score=159.27 Aligned_cols=160 Identities=18% Similarity=0.272 Sum_probs=120.3
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRT 98 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~ 98 (365)
+....+.+|+.++|.|.+.+.|.+..+.|++++.. +... +. .|.|.+++.+|+|.|+|.+.+..+ ..
T Consensus 11 p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~-~~~~-------~~---~L~i~~v~~~d~G~Y~C~~~~~~~--s~ 77 (176)
T 1f2q_A 11 PPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSL-SEET-------NS---SLNIVNAKFEDSGEYKCQHQQVNE--SE 77 (176)
T ss_dssp SSCSEEETTCCEEEECCTTCC----CCEEEETTEE-CSCC-------SS---EEEECSCCGGGCEEEEEECTTSSC--CC
T ss_pred CCCcceecCCcEEEEEeCCCCCCcceEEEEECCeE-CCCC-------ce---EEEEeccceecCEEEEEEcCCccc--cc
Confidence 34456899999999999777777537999999987 5532 22 899999999999999999986443 46
Q ss_pred cEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEE
Q psy3823 99 PCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLV 178 (365)
Q Consensus 99 ~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~ 178 (365)
.+.|.| ..++.+ +.. ....+.+|+.+.|.|.+.+.++...+.|+++|..+... ..+..|.
T Consensus 78 ~~~l~V---------~~~~~~-~~~----~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~------~~~~~L~ 137 (176)
T 1f2q_A 78 PVYLEV---------FSDWLL-LQA----SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW------YENHNIS 137 (176)
T ss_dssp CEEEEE---------ECSSEE-EEE----SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC------CCSSEEE
T ss_pred cEEEEE---------eCccee-ecC----CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee------cCCCeEE
Confidence 677887 434433 332 22467899999999999654444459999999988532 2347899
Q ss_pred EeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 179 LQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 179 i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
|.+++.+|+|.|+|.+.|..+...+..+.|.|.
T Consensus 138 i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 170 (176)
T 1f2q_A 138 ITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 170 (176)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred ECCCCcccCEEEEEEEEeCCcceEecCEEEEEe
Confidence 999999999999999999766555577889988
No 123
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.88 E-value=3.8e-22 Score=164.47 Aligned_cols=190 Identities=10% Similarity=0.175 Sum_probs=134.6
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEE-eCCCCC-cceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEE
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCT-VDANPQ-AQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~-~~~~p~-~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 87 (365)
+.|.+....+....+.+|+.+.|.|. ..+.|. + .++|++++.. +................|.|.+++.+|+|.|+|
T Consensus 6 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (201)
T 3s97_C 6 YLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDL-SYRWLLNEFP-VFITMDKRRFVSQTNGNLYIANVEASDKGNYSC 83 (201)
T ss_dssp EECCCCSSCCCCEEEETTCCEEECCCCCSEESSCC-EEEEEESSTT-CBCCCSSSEEECTTTCCEEESSCCGGGCEEEEE
T ss_pred cCCccCcCCCceEEEECCCCEEEeccccccCCCce-EEEEEECCce-eeeeeCCCeEEEcCCCeEEECcCCcccCeEEEE
Confidence 33444445556788999999999999 888888 8 9999999987 542221111111111379999999999999999
Q ss_pred EEEeCCCCCc---ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEee
Q psy3823 88 WARNEQGNQR---TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISN 164 (365)
Q Consensus 88 ~a~~~~~~~~---~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~ 164 (365)
.+.+..+... ..+.+.+..... ....+|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~----~~~~~~~g~~~~l~C~~~g~p~p~-v~W~~~~~~~~~ 156 (201)
T 3s97_C 84 FVSSPSITKSVFSKFIPLIPIPERT--TKPYPADIVVQF----KDVYALMGQNVTLECFALGNPVPD-IRWRKVLEPMPS 156 (201)
T ss_dssp EEEEGGGTEEEECCCEEEEEECCSS--CCCEEEEEEEEC----CCEEEETTCCEEEEEEEEEESCCE-EEEEETTBCCCT
T ss_pred EEEecCCCcchhhcccceeeccccc--cCCCCCceEecC----CceEEecCCcEEEEEEccCCCCCc-eEEEeCCCcCCC
Confidence 9998665443 344544422111 002345555544 234688999999999999998887 999999986653
Q ss_pred CCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 165 NASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 165 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
. ......+..|.|.++..+|+|.|+|.+.|..|... ..+.|.|.
T Consensus 157 ~--~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~ 200 (201)
T 3s97_C 157 T--AEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDK-HQARIYVQ 200 (201)
T ss_dssp T--CEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEE-EEEEEEEE
T ss_pred c--eeecCCCCEEEEccCChhhCEEEEEEEEecCCcee-eeEEEEEe
Confidence 2 22333467899999999999999999999988664 56666664
No 124
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.88 E-value=1.3e-21 Score=162.67 Aligned_cols=178 Identities=20% Similarity=0.342 Sum_probs=131.2
Q ss_pred EeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCC------------CCceeEecCCeEEEEEEccCCCCC
Q psy3823 14 CKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPR------------PLTSYSIQDGSTSVARYTPTSELE 81 (365)
Q Consensus 14 ~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~------------~~~~~~~~~~~~~~l~i~~~~~~d 81 (365)
.....+..+.+.+|+.+.|.|.+.+.|.+ .+.|++++.. +.. ... ..... ..|.|.+++.+|
T Consensus 3 ~v~~~~~~~~v~~G~~v~L~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~r-~~~~~---~~L~i~~v~~~D 76 (212)
T 1f97_A 3 SVYTAQSDVQVPENESIKLTCTYSGFSSP-RVEWKFVQGS-TTALVCYNSQITAPYADR-VTFSS---SGITFSSVTRKD 76 (212)
T ss_dssp EEECSCSEEEEETTCCEEEECEEESCSSE-EEEEEEEETT-EEEEEEETTEECGGGTTT-EEEET---TEEEESCCCGGG
T ss_pred eEEecCCCeEEEcCCCEEEEeEeCCCCCc-EEEEEECCCc-eeeEEecCCcccccccCc-EEeec---eeEEEcccCccc
Confidence 34455677888999999999997788888 9999998865 310 111 11122 389999999999
Q ss_pred CeEEEEEEEeCCCCC--cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEE-EEecCCCCeeEEEeC
Q psy3823 82 YGTLLCWARNEQGNQ--RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCH-IQANPPYKKLIWTHN 158 (365)
Q Consensus 82 ~G~Y~C~a~~~~~~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~-~~~~p~~~~i~W~~~ 158 (365)
+|.|+|.+.+..+.. ...+.|.| ..+|.+...+ ....+.+|+.+.|.|. +.+.|.+. +.|+++
T Consensus 77 ~G~Y~C~~~~~~g~~~~~~~~~l~V---------~~~p~~~~~~----~~~~~~~g~~~~l~C~~~~~~p~~~-i~W~~~ 142 (212)
T 1f97_A 77 NGEYTCMVSEEGGQNYGEVSIHLTV---------LVPPSKPTIS----VPSSVTIGNRAVLTCSEHDGSPPSE-YSWFKD 142 (212)
T ss_dssp CEEEEEEEEETTSSSEEEEEEEEEE---------EBCCCCCEEE----CCSEEETTSCEEEEEECSCCBSCCE-EEEEET
T ss_pred CeEEEEEEEccCCCcccEEEEEEEE---------EcCCCCcccC----CccccCCCCeEEEEEEcccCcCCCE-EEEEeC
Confidence 999999999987633 36777887 4455443332 2235789999999999 67888876 999999
Q ss_pred Ce-EEeeCCCC-------ceEE--eeceEEEeeecCCCCeEEEEEEEcCCCCC-CcccEEEEEe
Q psy3823 159 GI-TISNNASA-------GRII--TNQTLVLQSVTRHSGGLYACSAINSQGEG-GSTPFDLNIN 211 (365)
Q Consensus 159 ~~-~l~~~~~~-------~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~s~~~~l~v~ 211 (365)
+. .+...... .... ....|.|.++..+|+|.|+|.|.|..|.. .+..+.|.|.
T Consensus 143 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 143 GISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp TEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred CcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 98 77543221 1111 25689999999999999999999999977 4567777776
No 125
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.88 E-value=1.5e-21 Score=163.51 Aligned_cols=179 Identities=13% Similarity=0.216 Sum_probs=131.4
Q ss_pred CCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEE
Q psy3823 116 KPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAI 195 (365)
Q Consensus 116 ~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 195 (365)
.+.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|++++..+... ....|.|.+++..|+|.|+|.+.
T Consensus 18 ~~~i~~~p----~~~~v~~G~~v~L~C~~~~~p~~~-v~W~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~~~ 85 (218)
T 3k0w_A 18 GSKITVNP----ESKAVLAGQFVKLCCRATGHPFVQ-YQWFKMNKEIPNG-------NTSELIFNAVHVKDAGFYVCRVN 85 (218)
T ss_dssp -CCEEECC----CCEEEETTSBEEEECEETTTTSSE-EEEEETTEECTTC-------CSSEEEETTCCGGGCEEEEEEEE
T ss_pred CCEEEECC----CCeEEeCCCcEEEEeeecCCCCCE-EEEEECCEECCCC-------CCCEEEEccCChhhCeEeEEEEE
Confidence 44444444 335688999999999998887776 9999999887542 24689999999999999999999
Q ss_pred cCCCCCCcccEEEEEeeeeecccc-----cCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCC
Q psy3823 196 NSQGEGGSTPFDLNINKMVNLIFN-----SIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRP 270 (365)
Q Consensus 196 ~~~~~~~s~~~~l~v~~~~~~~~~-----~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~ 270 (365)
+..+...+..+.|.|......... ...+|.+...+.. ..+..|+.+.|.|.+.+.|.+. +.|++++......
T Consensus 86 n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~v~~G~~v~L~C~~~g~p~~~-v~W~~~~~~~~~~- 162 (218)
T 3k0w_A 86 NNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTS-QKLMPGSTLVLQCVAVGSPIPH-YQWFKNELPLTHE- 162 (218)
T ss_dssp CTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCC-EEECTTCCEEEECEEEBSSCCE-EEEEETTEECTTC-
T ss_pred cCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCc-eeecCCCcEEEEEEecccCCCe-EEEEECCEECCCC-
Confidence 988765556778888721100000 0011344333333 3378999999999999999998 9999988643221
Q ss_pred CceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcc-ceecEEEEEEc
Q psy3823 271 LTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGS-QRTPCTFHVVK 318 (365)
Q Consensus 271 ~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~ 318 (365)
....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|..
T Consensus 163 ---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 163 ---------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp ---------CSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred ---------CCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 2235999999999999999999999887 56677777654
No 126
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.88 E-value=6.6e-22 Score=165.34 Aligned_cols=186 Identities=17% Similarity=0.302 Sum_probs=133.6
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCC--CceEEeeceE----EEeeecCCCC
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNAS--AGRIITNQTL----VLQSVTRHSG 187 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~--~~~~~~~~~l----~i~~~~~~d~ 187 (365)
..+|.+...+ ....+.+|+.+.|.|.+.+.|.+. +.|+++|..+..... ......++.+ .|.+++..|+
T Consensus 7 ~~~P~i~~~p----~~~~v~~G~~v~L~C~~~g~p~~~-v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~ 81 (217)
T 2vr9_A 7 YQSPRIIEHP----TDLVVKKNEPATLNCKVEGKPEPT-IEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDG 81 (217)
T ss_dssp CCCCEEEECC----CCEEECTTSCEEECCEEECSSCCE-EEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCC
T ss_pred cCCCEEecCC----CceEEeCCCcEEEEEEcCCCCCCe-EEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccC
Confidence 4577766654 335788999999999999988776 999999998865432 1222223333 5788899999
Q ss_pred eEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEE-eeeCCCceeEEEeCCCCC
Q psy3823 188 GLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTV-DANPQAQYFTWAFNNSDT 266 (365)
Q Consensus 188 G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~~W~~~~~~~ 266 (365)
|.|+|.+.|..|...+..+.|.|.. .+|.+...+.. ..+..|+.+.|.|.+ .+.|.+. +.|++++...
T Consensus 82 G~Y~C~~~n~~g~~~~~~~~l~v~~---------~~~~~~~~~~~-~~~~~g~~v~l~C~~~~g~p~~~-v~W~~~g~~~ 150 (217)
T 2vr9_A 82 GEYWCVAKNRVGQAVSRHASLQIAV---------LRDDFRVEPKD-TRVAKGETALLECGPPKGIPEPT-LIWIKDGVPL 150 (217)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECE---------ECCSCSBCCCC-EEECTTSCEEECCBCCCEESCCE-EEEEETTEEE
T ss_pred ceEEEEEecCCCccccccceEEEEE---------eCCCcEECCCc-cEEcCCCeEEEEEECCCCCCCCe-EEEEECCcCC
Confidence 9999999998876544566677661 13333333323 337899999999999 8999998 9999988643
Q ss_pred CCC-------CCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEc
Q psy3823 267 APR-------PLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 267 ~~~-------~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
... ........++ .|.|.+++.+|+|.|+|.|.|..|....+..+.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 151 DDLKAMSFGASSRVRIVDGG---NLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp CCCCCC---CCCSEEEETTT---EEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CcccccccccCCcEEecCCC---cEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEE
Confidence 311 1112222222 599999999999999999999999987776665543
No 127
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.88 E-value=6.5e-22 Score=166.78 Aligned_cols=183 Identities=19% Similarity=0.312 Sum_probs=132.9
Q ss_pred ccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCc---eEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCccc
Q psy3823 129 ASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAG---RIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTP 205 (365)
Q Consensus 129 ~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~---~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~ 205 (365)
...+.+|+++.|.|.+.+.|.+. +.|++++..+....... ......+|.|.+++..|+|.|+|.+.|..+... ..
T Consensus 28 ~~~v~~G~~v~L~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~-~~ 105 (231)
T 3ojm_B 28 LHAVPAANTVKFRCPAGGNPMPT-MRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSIN-HT 105 (231)
T ss_dssp CEEEETTSCEEEECCEEEESCCE-EEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEE-EE
T ss_pred eEEEccCCCEEEEEecccCCCCe-EEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCccc-cc
Confidence 34678999999999999988877 99999999886543321 222355899999999999999999999877543 56
Q ss_pred EEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEe----CCCCCCCCCCcee-E-e---
Q psy3823 206 FDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAF----NNSDTAPRPLTSY-S-I--- 276 (365)
Q Consensus 206 ~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~----~~~~~~~~~~~~~-~-~--- 276 (365)
+.|.|.... ..+|.+.........+..|+.+.|.|.+.+.|.+. +.|++ +|........... . .
T Consensus 106 ~~l~V~~~~------~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~g~~~~~~~~~~~~~~~~~~ 178 (231)
T 3ojm_B 106 YHLDVVERS------RHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPH-IQWIKHVEKNGSKYGPDGLPYLKVLKHSG 178 (231)
T ss_dssp EEEEEECCC------CCCCEECTTCSCCEEEETTCCEEEECCEECSSCCE-EEEEEECCBTTBSBCTTSCBCEEEEEECS
T ss_pred EEEEEEcCC------CCCCceeeccCCceEEEeCCcEEEEEEEecCCCCE-EEEEECCCCCCccccCCCcceEeEecccc
Confidence 677776100 01233332223334488999999999999999997 99999 5543322221111 1 0
Q ss_pred -eCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCc
Q psy3823 277 -QDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 277 -~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 320 (365)
.....+.|.|.++..+|+|.|+|.|.|..|..+.++.|.|..++
T Consensus 179 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 223 (231)
T 3ojm_B 179 INSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQ 223 (231)
T ss_dssp TTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred cccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCC
Confidence 11123469999999999999999999999999999999987553
No 128
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.88 E-value=1.7e-21 Score=157.38 Aligned_cols=167 Identities=16% Similarity=0.221 Sum_probs=127.2
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+|.+.+.+.. ..+.+|+.++|.|.+.+.|.+..+.|++++..+.. .+..|.|.+++.+|+|.|+|.
T Consensus 5 ~~~p~i~~~p~~----~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~--------~~~~L~i~~~~~~d~G~Y~C~ 72 (175)
T 1fnl_A 5 LPKAVVFLEPQW----YSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS--------QASSYFIDAATVNDSGEYRCQ 72 (175)
T ss_dssp CCCCEEEEESCC----SEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES--------SCSEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEEcCCc----eeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC--------CceEEEEeCCCcccCEEEEEE
Confidence 457777776632 46889999999999998877666889999988863 346899999999999999999
Q ss_pred EEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeCCCCCCCCCCc
Q psy3823 194 AINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNSDTAPRPLT 272 (365)
Q Consensus 194 ~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~~~~ 272 (365)
+.|..+ +..+.|.|. .++.+..... ..+..|+.+.|.|.+.+.+++ . +.|+++|....
T Consensus 73 ~~n~~~---s~~~~l~V~----------~~~~~~~~~~--~~~~~g~~~~l~C~~~~~~~~~~-~~W~k~g~~~~----- 131 (175)
T 1fnl_A 73 TNLSTL---SDPVQLEVH----------IGWLLLQAPR--WVFKEEDPIHLRCHSWKNTALHK-VTYLQNGKDRK----- 131 (175)
T ss_dssp CSSSCC---CCCEEEEEE----------CSSEEEECSC--SEEETTCCEEEEEEECTTCCCEE-EEEEETTEEEE-----
T ss_pred eeCCcc---cccEEEEEe----------CCCceeeCCC--ceecCCCCEEEEEEcCCCCCceE-EEEEECCeEcc-----
Confidence 987543 356788887 5554443322 227899999999999887665 6 99999876321
Q ss_pred eeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcc-ceecEEEEEE
Q psy3823 273 SYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGS-QRTPCTFHVV 317 (365)
Q Consensus 273 ~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~ 317 (365)
.. .....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 132 --~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 132 --YF--HHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp --EE--EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred --CC--CCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 11 11235999999999999999999997664 5566777765
No 129
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.87 E-value=1.2e-20 Score=164.92 Aligned_cols=204 Identities=15% Similarity=0.237 Sum_probs=142.7
Q ss_pred CCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe-CCeEEeeCCCCceEE----eeceEEEeeecCCCCeEE
Q psy3823 116 KPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH-NGITISNNASAGRII----TNQTLVLQSVTRHSGGLY 190 (365)
Q Consensus 116 ~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~-~~~~l~~~~~~~~~~----~~~~l~i~~~~~~d~G~Y 190 (365)
+|.+.+.+ .+..+.+|+.+.|.|.+.+.++...+.|++ +|..+.......... ....|.|.+++.+|+|.|
T Consensus 2 ~~~v~~~p----~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 77 (291)
T 1qz1_A 2 VLQVDIVP----SQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIY 77 (291)
T ss_dssp CCCEEEES----SSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcceEecC----CCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEE
Confidence 34555555 334688999999999999877544599999 787775433222221 246899999999999999
Q ss_pred EEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCC
Q psy3823 191 ACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRP 270 (365)
Q Consensus 191 ~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~ 270 (365)
+|.+.|..|...+..+.|.|. .+|.+...+... .+..|+.+.|.|.+.+.|.+. +.|++++.......
T Consensus 78 ~C~~~n~~g~~~~~~~~l~v~----------~~~~~~~~~~~~-~~~~g~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~ 145 (291)
T 1qz1_A 78 KCVVTAEDGTQSEATVNVKIF----------QKLMFKNAPTPQ-EFKEGEDAVIVCDVVSSLPPT-IIWKHKGRDVILKK 145 (291)
T ss_dssp EEEEECTTSCEEEEEEEEEEE----------CCSEEEECCSSE-EEETTSCEEECCEEECSSCCE-EEEEETTSCSSTTC
T ss_pred EEEEEcCCCCeeEEEEEEEee----------ccccccCCCCcc-cccCCCeEEEEEEeccCCCCE-EEEEECCEEcccCC
Confidence 999999987655567788887 777766544333 388999999999999999998 99999987543322
Q ss_pred C-ceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccc--eecEEEEEEcCcc-------ccccCccccEEEEEEEE
Q psy3823 271 L-TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQ--RTPCTFHVVKAGE-------CEHPVAVSHRYVAKLYA 338 (365)
Q Consensus 271 ~-~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~--~~~~~l~v~~~~~-------c~~~l~~~~~~~~~~~~ 338 (365)
. ......++ .|.|.+++.+|+|.|+|.|.|..+.. ...+.+.|..++. -...+..|...++.|.+
T Consensus 146 ~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~ 220 (291)
T 1qz1_A 146 DVRFIVLSNN---YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDA 220 (291)
T ss_dssp CTTEEECTTS---CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEE
T ss_pred CceEEEccCC---cEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEE
Confidence 2 22222232 49999999999999999999977543 2444555543322 12234555555555543
No 130
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.87 E-value=1.2e-21 Score=162.55 Aligned_cols=173 Identities=17% Similarity=0.211 Sum_probs=127.7
Q ss_pred eEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCC-------------------CceeEecCCeEEEEEEccCCCC
Q psy3823 20 RIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRP-------------------LTSYSIQDGSTSVARYTPTSEL 80 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~-------------------~~~~~~~~~~~~~l~i~~~~~~ 80 (365)
....+.+|+.++|.|...+.|.+ .+.|++++.. .... .......++ .|.|.+++.+
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~-~v~W~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~ 81 (208)
T 3r4d_A 7 VPPQVAEDNNVLLLVHNLPLALG-AFAWYKGNTT-AIDKEIARFVPNSNMNFTGQAYSGREIIYSNG---SLLFQMITMK 81 (208)
T ss_dssp ESSEEETTCCEEEEEECCCSSCS-EEEEEESSCC-CGGGEEEEEEGGGTEEEECTTCCSSEEECTTS---CEEECSCCGG
T ss_pred ccceeecCCcEEEEEeCCCCCce-EEEeccCCCC-CccceEEEEecCCCccccCccccceeEEecCC---eEEEcccccc
Confidence 34567899999999997777888 9999998653 2211 011111223 6999999999
Q ss_pred CCeEEEEEEEeCCC-CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCC
Q psy3823 81 EYGTLLCWARNEQG-NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNG 159 (365)
Q Consensus 81 d~G~Y~C~a~~~~~-~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~ 159 (365)
|+|.|+|.+.+..+ .....+.|.|... ...|.+.... ..+.+|+.+.|.|.+.+.| +. +.|++++
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~------~~~p~i~~~~------~~~~~g~~v~l~C~~~~~p-p~-i~W~~~g 147 (208)
T 3r4d_A 82 DMGVYTLDMTDENYRRTQATVRFHVHQP------VTQPFLQVTN------TTVKELDSVTLTCLSNDIG-AN-IQWLFNS 147 (208)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEEECC------CCCCEEEESC------SSCCTTCCEEEEEECSCTT-CE-EEEEETT
T ss_pred CCeEEEEEEEcccCceeEEEEEEEeccC------CCCCEEecCC------ceEeeCCCEEEEEECCCCC-Cc-eEEEECC
Confidence 99999999998753 3347777887311 2234443321 1278899999999998865 54 9999999
Q ss_pred eEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 160 ITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 160 ~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
..+...........+.+|.|.++...|+|.|+|.|.|..|...+..+.|.|.
T Consensus 148 ~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 148 QSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp EECCCCSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred EeCCCCCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 9887543322222357899999999999999999999999988888999888
No 131
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.87 E-value=7.5e-21 Score=157.22 Aligned_cols=171 Identities=17% Similarity=0.238 Sum_probs=122.8
Q ss_pred EEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcccEE
Q psy3823 22 YGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRTPCT 101 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~~~ 101 (365)
..+.+|+.++|.|.+.+.|.+ .+.|++.....+. . .....+....|.|.+++.+|+|.|+|.|.|..+.....+.
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p-~i~W~~~~~~~~~--~--~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~ 85 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESP-FFSWRTQIDSPLN--G--KVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQ 85 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSC-EEEEEETTCCCCS--S--EEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCC-eEEEECCCCCCcc--c--eEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEE
Confidence 445699999999998889999 8999984322021 1 1112233447999999999999999999998776667888
Q ss_pred EEEEeccccCCCCCCCe-EEEEcCCccCccceecCCcEEEEEEEEecCCC--CeeEEEeCCeEEeeCCCCc------eEE
Q psy3823 102 FHVVKAGECEHPVDKPS-VQIKLGRNLNASVLNEGVDIYFDCHIQANPPY--KKLIWTHNGITISNNASAG------RII 172 (365)
Q Consensus 102 l~V~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~--~~i~W~~~~~~l~~~~~~~------~~~ 172 (365)
|.| ..+|. +.+.+. ..+.+|+.++|.|.+.+.+++ ..+.|++++..+....... ...
T Consensus 86 l~V---------~~~p~~~~~~~~-----~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~ 151 (202)
T 1vca_A 86 VEI---------YSFPKDPEIHLS-----GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLET 151 (202)
T ss_dssp EEE---------EBCCSCCEEEES-----SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEE
T ss_pred EEE---------EeCCCCCEeCCc-----eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceE
Confidence 888 43442 333332 357899999999999986443 2489999999885422111 122
Q ss_pred eeceEEEeeecCCCCeEEEEEEEcCCCCC------CcccEEEEEe
Q psy3823 173 TNQTLVLQSVTRHSGGLYACSAINSQGEG------GSTPFDLNIN 211 (365)
Q Consensus 173 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~------~s~~~~l~v~ 211 (365)
....|.|.....+|+|.|+|+|.|..+.. .+..+.|.|.
T Consensus 152 ~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~ 196 (202)
T 1vca_A 152 KSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVY 196 (202)
T ss_dssp EEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEE
T ss_pred EEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEe
Confidence 24567788888899999999999987753 2356778888
No 132
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.87 E-value=8.2e-22 Score=167.46 Aligned_cols=190 Identities=19% Similarity=0.316 Sum_probs=136.0
Q ss_pred cCCeEeeC---CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCce-eEecCCeEEEEEEccCCCCCCeEE
Q psy3823 10 DEPVCKQS---QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTS-YSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 10 ~~p~~~~~---~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
.+|.+... .+..+.+.+|+.+.|.|.+.+.|.+ .+.|++++.. +...... ..........|.|.+++.+|+|.|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 87 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTP-SISWLKNGRE-FRGEHRIGGIKLRHQQWSLVMESVVPSDRGNY 87 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCC-EEEEEETTEE-CCGGGSTTCCEEEGGGTEEEECSCCGGGCEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCc-eeEEEECCcc-cCCCCcccceeeeccceEEEEEeCCcccCEEE
Confidence 35655432 2457889999999999998788998 9999999987 5433221 111111222799999999999999
Q ss_pred EEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe----CCeE
Q psy3823 86 LCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH----NGIT 161 (365)
Q Consensus 86 ~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~----~~~~ 161 (365)
+|.+.+..+.....+.|.|... +..+|.+..... ....+.+|+.+.|.|.+.+.|.+. +.|++ ++..
T Consensus 88 ~C~~~~~~~~~~~~~~l~V~~~-----~~~~~~~~~~~~---~~~~~~~g~~v~L~C~~~~~p~p~-v~W~~~~~~~g~~ 158 (241)
T 3grw_A 88 TCVVENKFGSIRQTYTLDVLER-----SPHRPILQAGLP---ANQTAVLGSDVEFHCKVYSDAQPH-IQWLKHVEVNGSK 158 (241)
T ss_dssp EEEEEETTEEEEEEEEEEEECC-----CCCCCEEEECTT---CSEECCTTCCEEEEEEEECSSCCE-EEEEEECCSSSCS
T ss_pred EEEEeecCCceEEEEEEEEecc-----CCCCceeecCCC---ccceecCCCEEEEEEEEecCCCCE-EEEEEcccCCCcc
Confidence 9999998887777788887321 012333333222 234677899999999999988886 99999 7776
Q ss_pred EeeCCCCceE----------EeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 162 ISNNASAGRI----------ITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 162 l~~~~~~~~~----------~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
+......... .....|.|.++...|+|.|+|.+.|..|... ..+.|.|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~ 217 (241)
T 3grw_A 159 VGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAE-KAFWLSVH 217 (241)
T ss_dssp SCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEE-EEEEEEC-
T ss_pred cCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEE-EEEEEEec
Confidence 6543332211 1245799999999999999999999998765 67788887
No 133
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.87 E-value=1.2e-21 Score=163.02 Aligned_cols=186 Identities=17% Similarity=0.308 Sum_probs=131.6
Q ss_pred CCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCC----CceEEeece-----EEEeeecCC
Q psy3823 115 DKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNAS----AGRIITNQT-----LVLQSVTRH 185 (365)
Q Consensus 115 ~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~----~~~~~~~~~-----l~i~~~~~~ 185 (365)
.+|.+...+ ....+.+|+++.|.|.+.+.|.+. +.|++++..+..... ......++. |.|.+++..
T Consensus 8 ~pp~i~~~p----~~~~v~~G~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 82 (212)
T 2v9r_A 8 FPPRIVEHP----SDLIVSKGEPATLNCKAEGRPTPT-IEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRP 82 (212)
T ss_dssp EEEEEEECC----CCEEECTTCCEEECCEEEEESCCE-EEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCC
T ss_pred CCcceecCC----CceEEeCCCcEEEEEEcCCCCCCE-EEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcc
Confidence 356655544 335688999999999999888876 999999998864332 112222333 344566899
Q ss_pred CCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEE-eeeCCCceeEEEeCCC
Q psy3823 186 SGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTV-DANPQAQYFTWAFNNS 264 (365)
Q Consensus 186 d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~~W~~~~~ 264 (365)
|+|.|+|.+.|..|...+..+.|.|.. .++.+...... ..+..|+.+.|.|.+ .+.|.+. +.|++++.
T Consensus 83 d~G~Y~C~~~n~~g~~~~~~~~l~V~~---------~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~-v~W~~~~~ 151 (212)
T 2v9r_A 83 DEGVYVCVARNYLGEAVSHDASLEVAI---------LRDDFRQNPSD-VMVAVGEPAVMECQPPRGHPEPT-ISWKKDGS 151 (212)
T ss_dssp SCEEEEEEEEETTEEEECCCEEEEECE---------ECSSCSBCCCC-EEEETTSCEEEECBCCCEESCCE-EEEEETTE
T ss_pred cCeEEEEEEECCCCceeecceEEEEEe---------ccccceeCCCc-eEecCCCcEEEEEecCCCCCCCE-EEEEECCc
Confidence 999999999998876544567777762 12223222222 338899999999999 8899998 99999887
Q ss_pred CCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcccee-cEEEEEEcCc
Q psy3823 265 DTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRT-PCTFHVVKAG 320 (365)
Q Consensus 265 ~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~~ 320 (365)
.......... ..++ .|.|.++..+|+|.|+|.|.|..|.... .+.|.|..++
T Consensus 152 ~l~~~~~~~~-~~~~---~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 152 PLDDKDERIT-IRGG---KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERP 204 (212)
T ss_dssp EECTTSTTEE-EETT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred cCCCCcceEE-ccCC---eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCc
Confidence 5433222222 2222 5999999999999999999999998654 4788887553
No 134
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.87 E-value=2e-21 Score=160.14 Aligned_cols=186 Identities=17% Similarity=0.238 Sum_probs=125.6
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCC-ceEEeeceEEEeeecCCCCeEEEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASA-GRIITNQTLVLQSVTRHSGGLYAC 192 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C 192 (365)
+.+|.+...+. ..+.+|++++|.|.+.+.|. . +.|+++|..+...... ........|.|.+++..|+|.|+|
T Consensus 3 ~~~P~i~~~p~-----~~v~~G~~v~L~C~~~~~~~-~-~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 75 (198)
T 1ugn_A 3 LPKPTLWAEPG-----SVITQGSPVTLRCQGGQETQ-E-YRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRC 75 (198)
T ss_dssp CCCCEEEEESC-----SEEETTCCEEEEEECCTTCC-C-EEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEE
T ss_pred CCCCeEeccCC-----CcccCCCcEEEEEEecCCCc-E-EEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEE
Confidence 45787776653 26889999999999988665 4 9999999876421111 112235789999999999999999
Q ss_pred EEEcCC-C-CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCC
Q psy3823 193 SAINSQ-G-EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRP 270 (365)
Q Consensus 193 ~~~~~~-~-~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~ 270 (365)
.+.|.. + ...+..+.|.|.. ....|.+...+. ..+.+|+.++|.|.+.+. .+. +.|+++|.......
T Consensus 76 ~a~n~~~g~~~~s~~~~l~V~~-------~~~~p~i~~~~~--~~v~~G~~v~L~C~~~~~-~~~-v~W~k~g~~~~~~~ 144 (198)
T 1ugn_A 76 YYGSDTAGRSESSDPLELVVTG-------AYIKPTLSAQPS--PVVNSGGNVTLQCDSQVA-FDG-FILCKEGEDEHPQC 144 (198)
T ss_dssp EEEETTTEECCCCCCEEEEEEC-------SSCCCEEEEESC--SEEETTCCEEEEEECSSC-CSE-EEEEEC------CE
T ss_pred EEECCCCCcccCCccEEEEEcc-------cccCCccccCCc--cccCCCCcEEEEEecCCC-CcE-EEEEECCCccCCcc
Confidence 999987 5 2334678888871 001455443321 237899999999999887 666 99999987432211
Q ss_pred CceeEe-eCCCEEEEEEcCCCcccCeEEEEEEEcCCcc-----ceecEEEEEE
Q psy3823 271 LTSYSI-QDGSTSVARYTPTSELEYGTLLCWARNEQGS-----QRTPCTFHVV 317 (365)
Q Consensus 271 ~~~~~~-~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~-----~~~~~~l~v~ 317 (365)
...... ..+....|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 145 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 145 LNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred ccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 111111 1224567999999999999999999998763 2455566553
No 135
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.87 E-value=7.7e-22 Score=162.40 Aligned_cols=175 Identities=15% Similarity=0.219 Sum_probs=114.2
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCC-CceEEeeceEEEeeecCCCCeEEEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNAS-AGRIITNQTLVLQSVTRHSGGLYAC 192 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C 192 (365)
..+|.+...+. ..+.+|++++|.|.+.+.+. .+.|++++..+..... .........|.|.+++..|+|.|+|
T Consensus 3 ~~~P~i~~~p~-----~~v~~G~~v~L~C~~~~~~~--~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 75 (196)
T 2d3v_A 3 LSKATLWAEPG-----SVISRGNSVTIRCQGTLEAQ--EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRC 75 (196)
T ss_dssp CCBCEEEEESC-----SEEETTCCEEEEEECCTTCC--EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEE
T ss_pred CCCCEEEeCCC-----CcccCCCeEEEEEeCCCCCc--EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEE
Confidence 45777777653 26889999999999887654 5999999876642110 0011235689999999999999999
Q ss_pred EEEcCCCCC-CcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCC
Q psy3823 193 SAINSQGEG-GSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPL 271 (365)
Q Consensus 193 ~~~~~~~~~-~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~ 271 (365)
.+.|..+.. .+..+.|.|... ..+|.+...+. ..+.+|+.++|.|.+.+.| +. +.|+++|........
T Consensus 76 ~a~n~~g~~~~s~~~~l~V~~~-------~~~p~i~~~~~--~~v~~G~~v~L~C~~~~~p-~~-~~W~k~g~~~~~~~~ 144 (196)
T 2d3v_A 76 YYYSPAGWSEPSDPLELVVTGF-------YNKPTLSALPS--PVVTSGENVTLQCGSRLRF-DR-FILTEEGDHKLSWTL 144 (196)
T ss_dssp EEEETTEECBCCCCEEEEEECS-------SCCCEEEC-------------CEEEEEESSCC-SE-EEEEEC---CCEEEE
T ss_pred EEeCCCCcCCcCccEEEEecCC-------CCCCeEEccCC--ccccCCCcEEEEEEcCCCC-CE-EEEEccCCccccccc
Confidence 999887643 346678888710 01455543322 2378999999999999888 77 999999864321111
Q ss_pred ceeEee-CCCEEEEEEcCCCcccCeEEEEEEEcCCc
Q psy3823 272 TSYSIQ-DGSTSVARYTPTSELEYGTLLCWARNEQG 306 (365)
Q Consensus 272 ~~~~~~-~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g 306 (365)
...... ......|.|.+++.+|+|.|+|.|.|..+
T Consensus 145 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 145 DSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp ECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred ccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 111111 22346799999999999999999999875
No 136
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.87 E-value=3.3e-21 Score=168.52 Aligned_cols=190 Identities=16% Similarity=0.177 Sum_probs=136.7
Q ss_pred EeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCC-cceEEEE-eCCCcCCCCCCceeEecCCeEEEEEEccCCCCCC
Q psy3823 5 IFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ-AQYFTWA-FNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEY 82 (365)
Q Consensus 5 ~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~-~~~v~W~-~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~ 82 (365)
.+.+.++|... .......+.+|+.+.|.|.+.+ |. + .++|+ +++.. +..........+. .|.|.+++.+|.
T Consensus 85 ~l~V~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~-p~~~-~v~W~~~~g~~-l~~~~~~~~~~~~---~L~i~~v~~~d~ 157 (290)
T 2o26_X 85 YVFVRDPAKLF-LVGLPLFGKEDSDALVRCPLTD-PQVS-QYSLIECDGKS-LPTDLTFVPNPKA---GITIKNVKRAYH 157 (290)
T ss_dssp EEEEECSSCCB-CCCCCEEEETTSCEEECCCBSC-CSCE-EEEEEETTSCC-CCTTCEEEEETTT---EEEEESCCGGGT
T ss_pred EEEEeCCCccc-ccccceEEecCCeEEEeCcCCC-CCCc-eEEEEeCCCcC-CCCCCceeeCCCC---CEEEecccHHHC
Confidence 34455555444 3445566789999999999774 77 7 99995 67766 6654443333444 799999999999
Q ss_pred e-EEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCe
Q psy3823 83 G-TLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGI 160 (365)
Q Consensus 83 G-~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~ 160 (365)
| .|+|.|.|..+... ..+.|.|... +..+|.+...+. ...+.+|+.+.|.|.+.+.|.+..+.|++++.
T Consensus 158 G~~Y~C~a~n~~~~~~s~~~~l~V~~~-----~~~~P~i~~~~~----~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~ 228 (290)
T 2o26_X 158 RLCVRCAAQRDGTWLHSDKFTLKVREA-----IKAIPVVSVPET----SHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNP 228 (290)
T ss_dssp TCEEEEEEEETTEEEECCCEEEEEECC-----CCSCCEEECSCS----BCCCCTTCCEEEEEEEEESSTTCEEEEEEESS
T ss_pred CCEEEEEEEECCceEEeEEEEEEEEeC-----CCCCCccccCCC----cceEecCCcEEEEEEEecCCcceeEEEecCCC
Confidence 9 99999999855433 5688887310 125777655442 34688999999999999998886799999887
Q ss_pred EE----eeCCCCc-----eEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 161 TI----SNNASAG-----RIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 161 ~l----~~~~~~~-----~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
.+ ....... .......|.|.+++.+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~ 287 (290)
T 2o26_X 229 QPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSAN-VTTTLKVV 287 (290)
T ss_dssp SEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEE-EEEEECC-
T ss_pred CCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEE-EEEEEEEE
Confidence 63 2211111 223367899999999999999999999998764 56667665
No 137
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.87 E-value=2.5e-21 Score=171.25 Aligned_cols=187 Identities=15% Similarity=0.235 Sum_probs=138.3
Q ss_pred EeecccCCeEeeCCceEEEEecCCcEEEEEE-eCCCCCcceEEEEeCCCcCCCCCCceeEecCC---eEEEEEEccCCCC
Q psy3823 5 IFNSTDEPVCKQSQQRIYGALRNEQVLVSCT-VDANPQAQYFTWAFNNSGTAPRPLTSYSIQDG---STSVARYTPTSEL 80 (365)
Q Consensus 5 ~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~-~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~---~~~~l~i~~~~~~ 80 (365)
.+.+...|..... .....+..|+.+.|.|. ..+.|.+ .+.|++++.. +..........++ ..+.|.|.+...+
T Consensus 111 ~l~v~~~P~~~~~-~~~~~~~~~~~~~~~C~~~~~~P~~-~i~W~~~~~~-~~~~~~~~~~~~~~~~~~s~l~i~~~~~~ 187 (313)
T 4fqp_A 111 WLRVLAKPQNTAE-VQKVQLTGEPVPMARCVSTGGRPPA-QITWHSDLGG-MPNTSQVPGFLSGTVTVTSLWILVPSSQV 187 (313)
T ss_dssp EECCBBCCEEEEE-ECCBCCCSSCEEEEEEEEEEEBSCC-EEEEEETTCC-EEEEEEEECSSTTCEEEEEEEEECCCGGG
T ss_pred eeeeccCCcceec-ccceEeecCceEEEEEEccCccCCc-EEEeecCCcc-ccccceeeeecccccccceeeeecccccc
Confidence 3445555544332 22234567899999998 5678999 9999999887 5433222222222 2346899999999
Q ss_pred CCeEEEEEEEeCCCCCc--ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeC
Q psy3823 81 EYGTLLCWARNEQGNQR--TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHN 158 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~ 158 (365)
|+|.|+|.|.|..+... ..+.|.| ..+|.+.+.+.. ...+.+|+.++|.|.+.|+|.|..|.|+++
T Consensus 188 d~g~Y~C~a~n~~~~~~~~~~~~l~V---------~~~P~v~~~~~~---~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~ 255 (313)
T 4fqp_A 188 DGKNVTCKVEHESFEKPQLLTVNLTV---------YYPPEVSISGYD---NNWYLGQNEATLTCDARSNPEPTGYNWSTT 255 (313)
T ss_dssp TTCEEEEEEECTTSSSCEEEEEECCB---------CEEEEEEEECCC---SCEETTCCCEEEEEEEEEESCCCEEEEEET
T ss_pred cCeeEEEEEEccCcCccceeeeeccc---------ccCCcccccccc---ceeecCCCeEEEEEEecCCCCCcEEEEEEC
Confidence 99999999999877665 4455666 567877766543 235667899999999999998866999999
Q ss_pred CeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 159 GITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 159 ~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
|.++.. .....+.+|.|.+++..|+|.|+|.|.|..|... ..+.|.|.
T Consensus 256 ~~~l~~----~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V~ 303 (313)
T 4fqp_A 256 MGPLPP----FAVAQGAQLLIRPVDKPINTTLICNVTNALGARQ-AELTVQVK 303 (313)
T ss_dssp TBSCCT----TEEEETTEEEECCCSSCCEEEEEEEEECSSCEEE-EEEEEEEE
T ss_pred CEECCC----ceEEeCCEEEECcCChhhCEEEEEEEEeCCCcEE-EEEEEEEE
Confidence 987753 2344567899999999999999999999999655 67888888
No 138
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.87 E-value=8.3e-21 Score=165.69 Aligned_cols=194 Identities=11% Similarity=0.161 Sum_probs=138.7
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCe
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G 83 (365)
+.+.+.+.|......+....+.+|+.+.|.|.+.+.|.+..+.|++.+...+..........++ .|.|.+++.+|.|
T Consensus 81 ~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G 157 (289)
T 3ejj_X 81 IHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWR---GFIIRKAKVLDSN 157 (289)
T ss_dssp EEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTT---EEEESSCCGGGCE
T ss_pred EEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCC---CEEEeecccccCE
Confidence 3455555554344445677789999999999977766662499987443315544444444455 6999999999999
Q ss_pred EEEEEEEe-CCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeCCeE
Q psy3823 84 TLLCWARN-EQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHNGIT 161 (365)
Q Consensus 84 ~Y~C~a~~-~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~~~~ 161 (365)
.|+|.+.+ ..+.....+.|.|... +..+|.+...+.. ..+.+|+.+.|.|.+.+ .|.+. +.|++++..
T Consensus 158 ~Y~C~a~~~~~~~~~~~~~l~V~~~-----~~~~p~i~~~~~~----~~~~~g~~~~l~C~~~~~~p~~~-i~W~~~~~~ 227 (289)
T 3ejj_X 158 TYVCKTMVNGRESTSTGIWLKVNRV-----HPEPPQIKLEPSK----LVRIRGEAAQIVCSATNAEVGFN-VILKRGDTK 227 (289)
T ss_dssp EEEEEEEETTEEEECCCEEEEEESS-----CCCCCEEEEESSS----EECCSSSCEEEEEEEEESSSCCE-EEEEETTEE
T ss_pred EEEEEEEeCCCccccccEEEEEEEC-----CCCCCeEEecCCc----eEEEeCCcEEEEEEeCCCCCceE-EEEEECCEE
Confidence 99999994 4444457888888310 0157777766532 35678999999999998 56665 999999988
Q ss_pred EeeCCC----CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 162 ISNNAS----AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 162 l~~~~~----~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
+..... .........|.|.+++.+|+|.|+|.|.|..|... .++.|.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~-~s~~L~~~ 280 (289)
T 3ejj_X 228 LEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRT-ATMNFQVV 280 (289)
T ss_dssp CCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEE-EEEEEECC
T ss_pred eeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCcc-ccEEEEEE
Confidence 754211 12233367899999999999999999999999766 56666655
No 139
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.87 E-value=2.6e-21 Score=161.46 Aligned_cols=180 Identities=11% Similarity=0.098 Sum_probs=122.0
Q ss_pred cceecC--CcEEEEEEEEecCCCCeeEEEeC---CeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcc
Q psy3823 130 SVLNEG--VDIYFDCHIQANPPYKKLIWTHN---GITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGST 204 (365)
Q Consensus 130 ~~~~~g--~~v~l~C~~~~~p~~~~i~W~~~---~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~ 204 (365)
..+.+| +++.|.|.+.+ |.+. +.|+++ +..+... ..........|.|.+++..|+|.|+|.+.|..+...+.
T Consensus 17 v~v~eG~~~~v~L~C~~~~-p~~~-v~w~~~~~~g~~~~~~-~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~ 93 (213)
T 2x1w_L 17 VYITENKNKTVVIPCLGSI-SNLN-VSLCARYPEKRFVPDG-NRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSI 93 (213)
T ss_dssp EEECCSTTCEEEECCCBSS-TTCC-EEEEEETTTEEECCCS-SSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEECC
T ss_pred EEEecCCCccEEEeeccCC-CCcE-EEEEhhcCCCccccCC-CcccccCCccEEEccCChhcCceEEEEEEECCeeEEEE
Confidence 467899 99999999876 6665 999884 5555432 22222335689999999999999999999865544444
Q ss_pred cEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCc-eeEEEeCCCCCCCCCC-ceeEe--e---
Q psy3823 205 PFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQ-YFTWAFNNSDTAPRPL-TSYSI--Q--- 277 (365)
Q Consensus 205 ~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~~W~~~~~~~~~~~~-~~~~~--~--- 277 (365)
.+.|.|... ..|.+...+.....+..|+.++|.|.+.+.|.+. .+.|+++|........ ..... .
T Consensus 94 ~~~l~v~~~--------~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~ 165 (213)
T 2x1w_L 94 MYIVVVVGY--------RIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSE 165 (213)
T ss_dssp CEEEEECBC--------CEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCS
T ss_pred EEEEEEeCC--------cccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCcc
Confidence 467776510 1233333233332488999999999999866432 3999998874322100 00110 0
Q ss_pred -CCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCc
Q psy3823 278 -DGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 278 -~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 320 (365)
....+.|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..++
T Consensus 166 ~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 166 MKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp CEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred ceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 1224579999999999999999999999999999999987653
No 140
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.87 E-value=5.7e-21 Score=159.34 Aligned_cols=177 Identities=14% Similarity=0.125 Sum_probs=123.7
Q ss_pred CceEEEEecC--CcEEEEEEeCCCCCcceEEEEeC---CCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeC
Q psy3823 18 QQRIYGALRN--EQVLVSCTVDANPQAQYFTWAFN---NSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNE 92 (365)
Q Consensus 18 ~~~~~~v~~G--~~~~l~C~~~~~p~~~~v~W~~~---~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~ 92 (365)
++..+.+.+| ++++|.|.+.+ |.+ .++|+++ +.. +............ .|.|.+++.+|+|.|+|.|.+.
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~-~v~w~~~~~~g~~-~~~~~~~~~~~~~---~l~I~~v~~~D~G~Y~C~a~n~ 86 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNL-NVSLCARYPEKRF-VPDGNRISWDSKK---GFTIPSYMISYAGMVFCEAKIN 86 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTC-CEEEEEETTTEEE-CCCSSSCEEETTT---EEEEEGGGTTTCSEEEEEEC--
T ss_pred CceEEEEecCCCccEEEeeccCC-CCc-EEEEEhhcCCCcc-ccCCCcccccCCc---cEEEccCChhcCceEEEEEEEC
Confidence 4577888999 99999999765 777 9999885 544 5544333333444 6999999999999999999885
Q ss_pred CCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC-CCeeEEEeCCeEEeeC-----
Q psy3823 93 QGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP-YKKLIWTHNGITISNN----- 165 (365)
Q Consensus 93 ~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~~~i~W~~~~~~l~~~----- 165 (365)
.+... ..+.|.|.. ..+|.+.+.+.. ...+.+|++++|.|.+.+.|. +..+.|++++..+...
T Consensus 87 ~~~~~s~~~~l~v~~-------~~~p~~~~~~~~---~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~ 156 (213)
T 2x1w_L 87 DESYQSIMYIVVVVG-------YRIYDVVLSPSH---GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNR 156 (213)
T ss_dssp --CEECCCEEEEECB-------CCEEEEEEESCS---CEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEE
T ss_pred CeeEEEEEEEEEEeC-------CcccceEEcCCC---CeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEecc
Confidence 44333 447777721 123445555432 236889999999999998654 3349999988653210
Q ss_pred --CCCc---eEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 166 --ASAG---RIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 166 --~~~~---~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
.... ......+|.|.+++.+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 157 ~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~-~~~~l~V~ 206 (213)
T 2x1w_L 157 DLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKK-NSTFVRVH 206 (213)
T ss_dssp EECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEE-EEEEEEEE
T ss_pred ccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEE-EEEEEEEe
Confidence 0000 022345799999999999999999999998664 77888888
No 141
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.86 E-value=1.9e-21 Score=160.08 Aligned_cols=160 Identities=14% Similarity=0.183 Sum_probs=105.5
Q ss_pred EEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCC--cccE
Q psy3823 23 GALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQ--RTPC 100 (365)
Q Consensus 23 ~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~--~~~~ 100 (365)
.+.+|++++|.|.+.+.| . .+.|+|++.. +..... ..........|.|.+++.+|+|.|+|.+.+..+.. ...+
T Consensus 15 ~v~~G~~v~L~C~~~~~~-~-~~~W~k~g~~-~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~ 90 (196)
T 2d3v_A 15 VISRGNSVTIRCQGTLEA-Q-EYRLVKEGSP-EPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPL 90 (196)
T ss_dssp EEETTCCEEEEEECCTTC-C-EEEEEETTCS-SCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCE
T ss_pred cccCCCeEEEEEeCCCCC-c-EEEEEECCCC-CCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccE
Confidence 678999999999987654 4 8999999987 542211 01122345589999999999999999999876643 3667
Q ss_pred EEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceE----Eeece
Q psy3823 101 TFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRI----ITNQT 176 (365)
Q Consensus 101 ~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~----~~~~~ 176 (365)
.|.|... ..+|.+...+ ...+.+|+.++|.|.+.+.| +. +.|+++|..+......... .....
T Consensus 91 ~l~V~~~------~~~p~i~~~~-----~~~v~~G~~v~L~C~~~~~p-~~-~~W~k~g~~~~~~~~~~~~~~~~~~~~~ 157 (196)
T 2d3v_A 91 ELVVTGF------YNKPTLSALP-----SPVVTSGENVTLQCGSRLRF-DR-FILTEEGDHKLSWTLDSQLTPSGQFQAL 157 (196)
T ss_dssp EEEEECS------SCCCEEEC----------------CEEEEEESSCC-SE-EEEEEC---CCEEEEECEECTTSCEEEE
T ss_pred EEEecCC------CCCCeEEccC-----CccccCCCcEEEEEEcCCCC-CE-EEEEccCCcccccccccccccCCCceeE
Confidence 8888321 1245554322 13578999999999999877 54 9999999876421110011 12368
Q ss_pred EEEeeecCCCCeEEEEEEEcCCC
Q psy3823 177 LVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 177 l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
|.|.+++.+|+|.|+|.|.|..+
T Consensus 158 L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 158 FPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EECCCCBTTBCEEEEEEEEETTE
T ss_pred EEeeecCcccCeeEEEEEEccCC
Confidence 99999999999999999998754
No 142
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.86 E-value=6.9e-21 Score=156.92 Aligned_cols=170 Identities=16% Similarity=0.204 Sum_probs=116.8
Q ss_pred EEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCce--eEecCCeEEEEEEccCCCCCCeEEEEEEEeCC-C--CCc
Q psy3823 23 GALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTS--YSIQDGSTSVARYTPTSELEYGTLLCWARNEQ-G--NQR 97 (365)
Q Consensus 23 ~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~-~--~~~ 97 (365)
.+.+|++++|.|.+.+.|. .+.|+|++.. +...... ...... .|.|.+++.+|+|.|+|.+.|.. + ...
T Consensus 15 ~v~~G~~v~L~C~~~~~~~--~~~W~k~g~~-~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s 88 (198)
T 1ugn_A 15 VITQGSPVTLRCQGGQETQ--EYRLYREKKT-APWITRIPQELVKKG---QFPIPSITWEHTGRYRCYYGSDTAGRSESS 88 (198)
T ss_dssp EEETTCCEEEEEECCTTCC--CEEEEESSSC-CHHHHTSCHHHHTTT---EEEESSCCGGGCEEEEEEEEETTTEECCCC
T ss_pred cccCCCcEEEEEEecCCCc--EEEEEECCcc-ccccccccccCCccc---EEEECCCCHHHCeEEEEEEECCCCCcccCC
Confidence 6789999999999877664 6999999987 5311110 111233 79999999999999999999976 4 334
Q ss_pred ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCc-eEE---e
Q psy3823 98 TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAG-RII---T 173 (365)
Q Consensus 98 ~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~-~~~---~ 173 (365)
..+.|.|... ..+|.+...+ ...+.+|++++|.|.+.+. .+. +.|+++|..+....... ... .
T Consensus 89 ~~~~l~V~~~------~~~p~i~~~~-----~~~v~~G~~v~L~C~~~~~-~~~-v~W~k~g~~~~~~~~~~~~~~~~~~ 155 (198)
T 1ugn_A 89 DPLELVVTGA------YIKPTLSAQP-----SPVVNSGGNVTLQCDSQVA-FDG-FILCKEGEDEHPQCLNSQPHARGSS 155 (198)
T ss_dssp CCEEEEEECS------SCCCEEEEES-----CSEEETTCCEEEEEECSSC-CSE-EEEEEC------CEEEC------CC
T ss_pred ccEEEEEccc------ccCCccccCC-----ccccCCCCcEEEEEecCCC-CcE-EEEEECCCccCCccccccccCCCcc
Confidence 7788888311 1245554432 2367899999999999887 444 99999998774211110 111 1
Q ss_pred eceEEEeeecCCCCeEEEEEEEcCCCC----CCcccEEEEEe
Q psy3823 174 NQTLVLQSVTRHSGGLYACSAINSQGE----GGSTPFDLNIN 211 (365)
Q Consensus 174 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~----~~s~~~~l~v~ 211 (365)
...|.|.+++.+|+|.|+|.|.|..+. ..+..+.|.|.
T Consensus 156 ~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 156 RAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred eeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 478999999999999999999998653 23566777664
No 143
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=6.9e-21 Score=163.09 Aligned_cols=212 Identities=14% Similarity=0.128 Sum_probs=121.3
Q ss_pred EEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCce-eEecCCeEEEEEEccCCCCCCeEEEEEEEeCCC-----C
Q psy3823 22 YGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTS-YSIQDGSTSVARYTPTSELEYGTLLCWARNEQG-----N 95 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~-----~ 95 (365)
..+.+|++++|.|.+.. +.+ .|.|+|++.. +...... ..........|.|.+++.+|+|.|+|.+.+... .
T Consensus 16 ~~V~~G~~VtL~C~~~~-~~~-~~~W~k~g~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~ 92 (257)
T 1b6u_A 16 PLVKSEETVILQCWSDV-RFQ-HFLLHREGKF-KDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSA 92 (257)
T ss_dssp SEEESSCCEEEEEEESS-CCS-EEEEEEESTT-CEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCC
T ss_pred CEecCCCCEEEEEecCC-CCc-EEEEEECCCC-CCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccccc
Confidence 55789999999999764 456 9999999876 4311100 001223455899999999999999999986432 2
Q ss_pred CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceE---E
Q psy3823 96 QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRI---I 172 (365)
Q Consensus 96 ~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~---~ 172 (365)
....+.|.|... ..+|.+...+. ..+.+|++|+|.|.+.+.+ + .+.|+++|..+......... .
T Consensus 93 ~S~~~~L~V~~~------~~~P~l~~~p~-----~~V~~G~~vtL~C~~~~~~-~-~~~w~k~g~~~~~~~~~~~~~~~~ 159 (257)
T 1b6u_A 93 PSDPLDIVITGL------YEKPSLSAQPG-----PTVLAGESVTLSCSSRSSY-D-MYHLSREGEAHERRFSAGPKVNGT 159 (257)
T ss_dssp CCCCEEEEEECS------SCCCEEECSSC-----TTCBTTCEEEEEEECSSCC-S-EEEEEETTSSCEECCBCBCCSSSC
T ss_pred cCCCEEEecccC------CCCcceEccCC-----CccCCCCEEEEEEeCCCCC-c-EEEEEECCcccCcccccccccCCc
Confidence 236678888321 33566554432 2578999999999987653 3 49999999876542211111 1
Q ss_pred eeceEEEeeecCCCCeEEEEEEEcCCC----CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEE
Q psy3823 173 TNQTLVLQSVTRHSGGLYACSAINSQG----EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTV 248 (365)
Q Consensus 173 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 248 (365)
.+..|.|.+++ |+|.|+|.+.+... ...+..+.|.|. ..|....+.........|..+.|.|.+
T Consensus 160 ~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~----------g~p~~~~p~~~~~~~~~g~~~~l~~~~ 227 (257)
T 1b6u_A 160 FQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVT----------GNPSNSWPSPTEPSSETGNPRHLHAAA 227 (257)
T ss_dssp CBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCB----------CCC------------------------
T ss_pred eeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEe----------ccCCCCCCCCcccCccCCCeEEEEEEE
Confidence 25689999998 99999999997532 344577888888 777655333322235678889999877
Q ss_pred eeeCCCceeEEEeCC
Q psy3823 249 DANPQAQYFTWAFNN 263 (365)
Q Consensus 249 ~~~p~~~~~~W~~~~ 263 (365)
|.+-+. +.|...+
T Consensus 228 -~~~~~~-~~~~~~~ 240 (257)
T 1b6u_A 228 -EQKLIS-EEDLNLD 240 (257)
T ss_dssp ---------------
T ss_pred -cchHHH-HHHhhhh
Confidence 455565 8998754
No 144
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.86 E-value=2.4e-20 Score=151.87 Aligned_cols=172 Identities=15% Similarity=0.175 Sum_probs=123.0
Q ss_pred ccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEE
Q psy3823 9 TDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCW 88 (365)
Q Consensus 9 ~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 88 (365)
...|.+... +.. .+.+|++++|.|.+.+ |.+ .+.|+|++.. . ..... .|.|.+++.+|+|.|+|.
T Consensus 6 ~~~P~i~~~-p~~-~v~~G~~v~L~C~~~~-~~~-~~~W~k~g~~-~-------~~~~~---~L~i~~v~~~D~G~Y~C~ 70 (184)
T 2gi7_A 6 LPKPSLQAL-PSS-LVPLEKPVTLRCQGPP-GVD-LYRLEKLSSS-R-------YQDQA---VLFIPAMKRSLAGRYRCS 70 (184)
T ss_dssp BCCCEEEEE-SCS-EEETTCCEEEEEECST-TCS-EEEEEETTTC-C-------EESSS---EEEESSCCGGGCEEEEEE
T ss_pred CCCCeEEeC-CCc-cccCCCcEEEEEeCCC-CCC-EEEEEECCcc-c-------cCccc---EEEECcCChhhCceEEEE
Confidence 344544332 222 6889999999999766 777 9999999865 1 12333 799999999999999999
Q ss_pred EEeCCCC--CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCC
Q psy3823 89 ARNEQGN--QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNA 166 (365)
Q Consensus 89 a~~~~~~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~ 166 (365)
+.+..+. ....+.|.|... ..+|.+...+. ..+.+|+.++|.|.+.+.+ + .+.|+++|..+...
T Consensus 71 a~n~~g~~~~s~~~~l~V~~~------~~~p~i~~~p~-----~~v~~G~~v~l~C~~~~~~-~-~~~w~k~g~~~~~~- 136 (184)
T 2gi7_A 71 YQNGSLWSLPSDQLELVATGV------FAKPSLSAQPG-----PAVSSGGDVTLQCQTRYGF-D-QFALYKEGDPAPYK- 136 (184)
T ss_dssp EEETTEEBCCCCCEEEEEESS------SCCCEEEEECC-----CSSCCTTCEEEEEECSSCC-C-EEEEEECCCCTTSC-
T ss_pred EEcCCCccCCCCCEEEEecCc------CCCCEEEeCCC-----ceecCCCcEEEEEEcCCCC-c-EEEEEECCCcCcce-
Confidence 9997753 236677877311 23566665542 3577999999999976644 4 49999999876532
Q ss_pred CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC----CCcccEEEEE
Q psy3823 167 SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE----GGSTPFDLNI 210 (365)
Q Consensus 167 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~----~~s~~~~l~v 210 (365)
.........|.|.+++.+|+|.|+|.+.|..+. ..+..+.|.|
T Consensus 137 -~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 183 (184)
T 2gi7_A 137 -NPERWYRASFPIITVTAAHSGTYRCYSFSSRDPYLWSAPSDPLELVV 183 (184)
T ss_dssp -CCCEEEEESSSEEEETTCCSEEEEEEEECTTSTTBCCCCCCCEEEEC
T ss_pred -ecCCCceEEEEEccCCccCCeEEEEEEEeCCCCcccCCCCCcEEEEe
Confidence 123344678999999999999999999997543 2344555543
No 145
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.86 E-value=2.9e-21 Score=156.06 Aligned_cols=169 Identities=17% Similarity=0.205 Sum_probs=124.4
Q ss_pred CCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEE
Q psy3823 115 DKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSA 194 (365)
Q Consensus 115 ~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 194 (365)
.+|.+...+.. ..+.+|++++|.|.+.+.+.+..+.|++++..+.. .+..|.|.+++.+|+|.|+|.+
T Consensus 3 ~~P~i~~~p~~----~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~~ 70 (176)
T 1f2q_A 3 QKPKVSLNPPW----NRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE--------TNSSLNIVNAKFEDSGEYKCQH 70 (176)
T ss_dssp -CCCCEEESSC----SEEETTCCEEEECCTTCC----CCEEEETTEECSC--------CSSEEEECSCCGGGCEEEEEEC
T ss_pred CCCEEEcCCCC----cceecCCcEEEEEeCCCCCCcceEEEEECCeECCC--------CceEEEEeccceecCEEEEEEc
Confidence 46777776533 46889999999999988877655999999988753 2478999999999999999999
Q ss_pred EcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEe-eeCCCceeEEEeCCCCCCCCCCce
Q psy3823 195 INSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVD-ANPQAQYFTWAFNNSDTAPRPLTS 273 (365)
Q Consensus 195 ~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~~W~~~~~~~~~~~~~~ 273 (365)
.|..+ +..+.|.|. .++.+...... .+..|+.+.|.|.+. +.|.+. +.|+++|.....
T Consensus 71 ~~~~~---s~~~~l~V~----------~~~~~~~~~~~--~~~~g~~~~l~C~~~~~~p~~~-~~W~~~g~~~~~----- 129 (176)
T 1f2q_A 71 QQVNE---SEPVYLEVF----------SDWLLLQASAE--VVMEGQPLFLRCHGWRNWDVYK-VIYYKDGEALKY----- 129 (176)
T ss_dssp TTSSC---CCCEEEEEE----------CSSEEEEESCS--EEETTSCEEEEEEEGGGCCEEE-EEEEETTEECCS-----
T ss_pred CCccc---cccEEEEEe----------CcceeecCCcc--eeeCCCCEEEEEEecCCCCceE-EEEEECCEEEee-----
Confidence 87553 345778877 55544433222 278999999999995 455666 999998864421
Q ss_pred eEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCc-cceecEEEEEEcCc
Q psy3823 274 YSIQDGSTSVARYTPTSELEYGTLLCWARNEQG-SQRTPCTFHVVKAG 320 (365)
Q Consensus 274 ~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g-~~~~~~~l~v~~~~ 320 (365)
......|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|..++
T Consensus 130 ----~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 130 ----WYENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAP 173 (176)
T ss_dssp ----CCCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSC
T ss_pred ----ecCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCC
Confidence 11224699999999999999999999754 45566888887554
No 146
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.86 E-value=1e-21 Score=162.91 Aligned_cols=176 Identities=18% Similarity=0.308 Sum_probs=127.7
Q ss_pred CccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEe----------eCCCCceEEeeceEEEeeecCCCCeEEEEEEEcC
Q psy3823 128 NASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITIS----------NNASAGRIITNQTLVLQSVTRHSGGLYACSAINS 197 (365)
Q Consensus 128 ~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~----------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 197 (365)
....+.+|+++.|.|.+.+.|.+. +.|++++..+. .....+.......|.|.+++.+|+|.|+|.+.+.
T Consensus 12 ~~~~v~~G~~v~L~C~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 90 (209)
T 1nbq_A 12 PEVRIPENNPVKLSCAYSGFSSPR-VEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEE 90 (209)
T ss_dssp SBCCEETTCCCEEECEEESCSSEE-EEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEET
T ss_pred CceEEEcCCCEEEEEEEeCCCCcE-EEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEEecC
Confidence 334688999999999999887666 99999765531 1112234444588999999999999999999998
Q ss_pred CCCC-CcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEE-eeeCCCceeEEEeCCCCCCCCCCc---
Q psy3823 198 QGEG-GSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTV-DANPQAQYFTWAFNNSDTAPRPLT--- 272 (365)
Q Consensus 198 ~~~~-~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~~W~~~~~~~~~~~~~--- 272 (365)
.+.. .+..+.|.|. .+|.+........ +..|+.+.|.|.+ .+.|.+. +.|++++.........
T Consensus 91 ~g~~~~~~~~~l~V~----------~~p~~~~~~~~~~-~~~g~~~~l~C~~~~~~p~~~-v~W~~~~~~~~~~~~~~~~ 158 (209)
T 1nbq_A 91 GGNSYGEVKVKLIVL----------VPPSKPTVNIPSS-ATIGNRAVLTCSEQDGSPPSE-YTWFKDGIVMPTNPKSTRA 158 (209)
T ss_dssp TSSCEECCEEECCEE----------BCCCCCCCCCBSE-EETTSCEEECCCCCSCBSCCE-EEEEETTCCCCSCSSSSSS
T ss_pred CCCccceEEEEEEEe----------cCCcCCCcccccc-eecCCEEEEEEeCCCCCCCce-eEEEECCeeCCCcccccee
Confidence 6632 2356677777 6666554333322 7899999999997 8899997 9999998754332211
Q ss_pred ---eeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccc--eecEEEEE
Q psy3823 273 ---SYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQ--RTPCTFHV 316 (365)
Q Consensus 273 ---~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~--~~~~~l~v 316 (365)
..+......+.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|
T Consensus 159 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 159 FSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp CTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred eeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 111112233469999999999999999999999998 44455544
No 147
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.86 E-value=8.1e-21 Score=152.41 Aligned_cols=158 Identities=17% Similarity=0.268 Sum_probs=119.0
Q ss_pred ceEEEEecCCcEEEEEEeCCCC-CcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP-QAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p-~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
+....+.+|+.+.|.|.+.+.| .+ .+.|++++.. +..... .+.+.+++.+|+|.|+|.+.+.. ..
T Consensus 11 p~~~~v~~G~~v~l~C~~~~~p~~~-~~~W~~~g~~-~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~~~--~s 76 (170)
T 3ry4_A 11 PPWINVLQEDSVTLTCQGARSPESD-SIQWFHNGNL-IPTHTQ----------PSYRFKANNNDSGEYTCQTGQTS--LS 76 (170)
T ss_dssp SCCSEEETTCEEEEEEESCCCSSSS-CEEEEETTEE-CTTCCS----------SEEEEECCGGGCEEEEEEETTSB--CC
T ss_pred CCCeEEECCCcEEEEEEecCCCCcc-eEEEEECCeE-cccCcc----------ceEEEecccccCeEEEEEEeCCC--ce
Confidence 3445678999999999977776 45 9999999987 654321 35567899999999999998643 33
Q ss_pred ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceE
Q psy3823 98 TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTL 177 (365)
Q Consensus 98 ~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l 177 (365)
..+.|.| ..+|.+.. . ....+.+|+.+.|.|.+.+.++...+.|+++|..+.... .+..|
T Consensus 77 ~~~~l~v---------~~~~~~~~-~----~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~------~~~~L 136 (170)
T 3ry4_A 77 DPVHLTV---------LFEWLVLQ-T----PHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSH------LDPTF 136 (170)
T ss_dssp CCEEEEE---------ECCSEEEE-C----SCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEES------SCCEE
T ss_pred EeEEEEE---------ECCceEec-C----CCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccC------CCCeE
Confidence 5678888 44554332 2 223678899999999996554434599999999876322 24689
Q ss_pred EEeeecCCCCeEEEEEEEcCCCCCCcccEEEEE
Q psy3823 178 VLQSVTRHSGGLYACSAINSQGEGGSTPFDLNI 210 (365)
Q Consensus 178 ~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v 210 (365)
.|.+++.+|+|.|+|.+.|..|...+..+.|.|
T Consensus 137 ~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 137 SIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 999999999999999999998865556677765
No 148
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.86 E-value=2.1e-20 Score=163.24 Aligned_cols=183 Identities=17% Similarity=0.283 Sum_probs=129.6
Q ss_pred CCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe-CCeEEeeCCCCceEEe--eceEEEeeecCCCCeEEEE
Q psy3823 116 KPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH-NGITISNNASAGRIIT--NQTLVLQSVTRHSGGLYAC 192 (365)
Q Consensus 116 ~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~-~~~~l~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C 192 (365)
+|.+.+.+ .+..+.+|+.+.|.|.+.+.|. .+.|++ +|..+........... ..+|.|.+++.+|+|.|+|
T Consensus 4 ~p~v~~~~----~~~~v~~G~~v~l~C~~~~~p~--~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 77 (291)
T 2wim_A 4 LLQVTISL----SKVELSVGESKFFTCTAIGEPE--SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRC 77 (291)
T ss_dssp CCEEEESC----SEEEEETTCCEEEEEEEESCCS--EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CceEEEec----cceEecCCCcEEEEEEEeCCCC--ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEE
Confidence 55555544 3457889999999999998764 499999 6766654332212211 3489999999999999999
Q ss_pred EEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCC-CC
Q psy3823 193 SAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPR-PL 271 (365)
Q Consensus 193 ~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~-~~ 271 (365)
.+.|..|...+..+.|.|. .+|.+....... .+..|+.+.|.|.+.+.|.+. +.|++++...... ..
T Consensus 78 ~~~n~~g~~~~~~~~l~v~----------~~~~~~~~~~~~-~v~~G~~v~l~C~~~~~p~~~-v~W~~~~~~~~~~~~~ 145 (291)
T 2wim_A 78 QATDAKGQTQEATVVLEIY----------QKLTFREVVSPQ-EFKQGEDAEVVCRVSSSPAPA-VSWLYHNEEVTTISDN 145 (291)
T ss_dssp EEECSSSCEEEEEEEEEEE----------CCCBCCSCCCSE-EEETTSCEEECCCCBCSSCCE-EEEECC----CBCCCS
T ss_pred EEecccCceEEEEEEEEec----------CCcceEeCCCCh-hhcCCCCEEEEEEEccCCCCE-EEEEECCccccccCCc
Confidence 9999888765567778887 667655443333 388999999999999999998 9999988644321 22
Q ss_pred ceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccce--ecEEEEEEcC
Q psy3823 272 TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQR--TPCTFHVVKA 319 (365)
Q Consensus 272 ~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~--~~~~l~v~~~ 319 (365)
......++ .|.|.+++.+|+|.|+|.|.|..+... ..+.+.|..+
T Consensus 146 ~~~~~~~~---~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~ 192 (291)
T 2wim_A 146 RFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVP 192 (291)
T ss_dssp SEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBC
T ss_pred eEEEccCC---CEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccC
Confidence 22222233 399999999999999999999886533 4445555433
No 149
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.86 E-value=2.4e-21 Score=163.21 Aligned_cols=191 Identities=18% Similarity=0.263 Sum_probs=135.5
Q ss_pred ccCCeEeeC---CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCce-eEecCCeEEEEEEccCCCCCCeE
Q psy3823 9 TDEPVCKQS---QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTS-YSIQDGSTSVARYTPTSELEYGT 84 (365)
Q Consensus 9 ~~~p~~~~~---~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~ 84 (365)
..+|.+... ......+.+|+.+.|.|.+.+.|.+ .+.|++++.. +...... ..........|.|.+++.+|+|.
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 90 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMP-TMRWLKNGKE-FKQEHRIGGYKVRNQHWSLIMESVVPSDKGN 90 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCC-EEEEEETTEE-CCGGGSTTCCEEEGGGTEEEECSCCGGGCEE
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecccCCCC-eEEEEECCcc-ccccccccceeeecCcceEEEecCCcccCEE
Confidence 345555432 2367788999999999998788998 9999999987 5433221 00111112379999999999999
Q ss_pred EEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe----CCe
Q psy3823 85 LLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH----NGI 160 (365)
Q Consensus 85 Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~----~~~ 160 (365)
|+|.+.+..+.....+.|.|... +..+|.+..... ....+.+|+.+.|.|.+.+.|.+. +.|++ +|.
T Consensus 91 Y~C~~~n~~~~~~~~~~l~V~~~-----~~~~p~~~~~~~---~~~~~~~g~~~~l~C~~~~~p~p~-v~W~~~~~~~g~ 161 (231)
T 3ojm_B 91 YTCVVENEYGSINHTYHLDVVER-----SRHRPILQAGLP---ANASTVVGGDVEFVCKVYSDAQPH-IQWIKHVEKNGS 161 (231)
T ss_dssp EEEEEEETTEEEEEEEEEEEECC-----CCCCCEECTTCS---CCEEEETTCCEEEECCEECSSCCE-EEEEEECCBTTB
T ss_pred EEEEEecccCcccccEEEEEEcC-----CCCCCceeeccC---CceEEEeCCcEEEEEEEecCCCCE-EEEEECCCCCCc
Confidence 99999998887777788887321 011232211111 334678899999999999988886 99999 777
Q ss_pred EEeeCCCCceE---------EeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 161 TISNNASAGRI---------ITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 161 ~l~~~~~~~~~---------~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
.+......... .....|.|.++...|+|.|+|.+.|..|... ..+.|.|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~ 220 (231)
T 3ojm_B 162 KYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQAN-QSAWLTVL 220 (231)
T ss_dssp SBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEE-EEEEEEEE
T ss_pred cccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEe-eEEEEEEe
Confidence 66433221111 1134699999999999999999999998764 67888888
No 150
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.85 E-value=5.2e-20 Score=153.33 Aligned_cols=171 Identities=15% Similarity=0.194 Sum_probs=120.6
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-C------------CCCCceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-A------------PRPLTSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
+..+.+.+|++++|.|.+.+.|.+ .+.|+|++... + ...........+....|.|.+++.+|+|.|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRASQSIGN-NLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMY 86 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CccEEEeCCCcEEEEEECCCCCCC-CEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEE
Confidence 456778999999999998888888 89999864320 1 001121222234455899999999999999
Q ss_pred EEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeCCeEEe
Q psy3823 86 LCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHNGITIS 163 (365)
Q Consensus 86 ~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~~~~l~ 163 (365)
+|.+.+..+... ....|.|... ..+|.+.+.... ....+|+.++|.|.+.+ .|++..+.|+++|..+.
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~------~~~p~v~~~~~~----~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~ 156 (213)
T 3d9a_L 87 FCQQSNSWPYTFGGGTKLEIKRA------DAAPTVSIFPPS----SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 156 (213)
T ss_dssp EEEECSSSSCEECCCEEEEECCC------CBCCEEEEECCC----HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred EEeeecCCcceeCCCEEEEEecC------CCCceeEeECCC----hhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCc
Confidence 999998766433 4457777211 236776665432 23447999999999997 55554699999999886
Q ss_pred eC-C--------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 164 NN-A--------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 164 ~~-~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.. . ..+.......|.|.++..+|+|.|+|.|.|....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3d9a_L 157 NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 202 (213)
T ss_dssp TTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred ceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCC
Confidence 43 0 0111122458999999999999999999997654
No 151
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.85 E-value=9e-21 Score=156.66 Aligned_cols=175 Identities=10% Similarity=0.108 Sum_probs=120.6
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCC-----cceEEEEeCCCcCCCCCCceeEecC---CeEEEEEEccCCCCCCeEEEEE
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQ-----AQYFTWAFNNSGTAPRPLTSYSIQD---GSTSVARYTPTSELEYGTLLCW 88 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~-----~~~v~W~~~~~~~l~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~ 88 (365)
..+..+.+.+|+.+.|.|...+.|. + .+.|++++..............+ .....|.|.+++.+|+|.|+|.
T Consensus 7 ~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~-~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 85 (202)
T 3bp6_B 7 APKEVYTVDVGSSVSLECDFDRRECTELEGI-RASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCL 85 (202)
T ss_dssp CSCSEEEEETTSCEEEEEEECTTC---CTTE-EEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred cCCcCEEEeCCCcEEEEEEecCCCCCCccce-EEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEE
Confidence 3345677899999999999888776 6 99999944331332222222221 1345899999999999999999
Q ss_pred EEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCC
Q psy3823 89 ARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASA 168 (365)
Q Consensus 89 a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~ 168 (365)
+.+..+.....+.|.|... ...|.+.+ ..+.+|+.+.|.|.+.|+|.+. +.|++++..+....
T Consensus 86 ~~~~~~~~~~~~~l~V~~~------~~~p~~~~--------~~~~~g~~v~l~C~~~g~P~p~-v~W~~~~~~~~~~~-- 148 (202)
T 3bp6_B 86 VICGAAWDYKYLTVKVKAS------YMRIDTRI--------LEVPGTGEVQLTCQARGYPLAE-VSWQNVSVPANTSH-- 148 (202)
T ss_dssp EEETTEEEEEEEEEEEEBC------CCCEEEEE--------EECTTTCCEEEEEEEEEBSCCE-EEETTCCSCCEEEE--
T ss_pred EEeCCCcceEEEEEEecCC------CCcccEEE--------EecCCCCeEEEEEEccccCCce-EEEEeCCCCccCce--
Confidence 9998876677888888321 12333332 1345799999999999988877 99999876553210
Q ss_pred ceEEe---eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 169 GRIIT---NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 169 ~~~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
.... ...+.+.++...|+|.|+|.|.|..|... ..+.|.|.
T Consensus 149 -~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~-~~~~l~v~ 192 (202)
T 3bp6_B 149 -IRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKEL-TSAIIDPL 192 (202)
T ss_dssp -EECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEE-EEEEECC-
T ss_pred -eeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccc-cEEEEEec
Confidence 1111 13456778899999999999999998654 44455443
No 152
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.85 E-value=9.8e-20 Score=151.37 Aligned_cols=171 Identities=14% Similarity=0.204 Sum_probs=119.1
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCc-CC------------CCCCceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSG-TA------------PRPLTSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~-~l------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
+....+.+|+.++|.|.+.+.|.+ .+.|+++... .+ ...........+....|.|.+++.+|+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 85 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTS-RMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIY 85 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCC-CEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEE
Confidence 566788999999999998888888 9999995421 01 001111222233445899999999999999
Q ss_pred EEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeCCeEEe
Q psy3823 86 LCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHNGITIS 163 (365)
Q Consensus 86 ~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~~~~l~ 163 (365)
+|.+.+..+... ....|.|... ..+|.+.+.+.. ....+|+.++|.|.+.| .|++..+.|+++|..+.
T Consensus 86 ~C~~~~~~~~~~~~~~~l~V~~~------~~~P~v~~~~~~----~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~ 155 (210)
T 1lk3_L 86 FCQQSWNGPLTFGAGTKLELKRA------DAAPTVSIFPPS----TEQLATGGASVVCLMNNFYPRDISVKWKIDGTERR 155 (210)
T ss_dssp EEEECSSSSCEECCCEEEEECCC------CBCCEEEEECCC----HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred EEEEEcCCCceeCCCEEEEEcCC------CcCCeEEEECCc----hhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCC
Confidence 999998765432 4457777211 236776665432 23448999999999997 45544699999999875
Q ss_pred eC-C--------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 164 NN-A--------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 164 ~~-~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.. . ..+.......|.|.++..+|+|.|+|.|.|....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 156 DGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp TTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 43 0 0111122347999999999999999999997653
No 153
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.85 E-value=3.8e-20 Score=151.21 Aligned_cols=180 Identities=13% Similarity=0.169 Sum_probs=125.3
Q ss_pred CCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCC-CceEEeeceEEEeeecCCCCeEEEEE
Q psy3823 115 DKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNAS-AGRIITNQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 115 ~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~ 193 (365)
.+|.+...+.. .+.+|++|+|.|.+.+. +..+.|+++|..+..... ......+..|.|.+++..|+|.|+|.
T Consensus 3 ~~P~i~~~p~~-----~v~~G~~v~L~C~~~~~--~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 75 (188)
T 1oll_A 3 PKPFIWAEPHF-----MVPKEKQVTICCQGNYG--AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCI 75 (188)
T ss_dssp CCCEEEEESCS-----EEETTCCEEEEEECCTT--CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEeecCC-----cCCCCCCEEEEEecCCC--CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEE
Confidence 46777776532 58899999999998653 334999999988753211 11122357899999999999999999
Q ss_pred EEcCCCC-CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCc
Q psy3823 194 AINSQGE-GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLT 272 (365)
Q Consensus 194 ~~~~~~~-~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~ 272 (365)
+.+..+. ..+..+.|.|.. ...+|.+...+ .. .+.+|+.++|.|.+.+ +++. +.|+++|.....
T Consensus 76 ~~~~~~~~~~s~~~~l~V~~-------~~~~p~i~~~p-~~-~v~~G~~v~L~C~~~~-~~~~-~~w~k~g~~~~~---- 140 (188)
T 1oll_A 76 YRVGELWSEPSNLLDLVVTE-------MYDTPTLSVHP-GP-EVISGEKVTFYCRLDT-ATSM-FLLLKEGRSSHV---- 140 (188)
T ss_dssp EEETTEECCCCCCEEEEEES-------CSCCCEEEEES-CS-EEETTCEEEEEEECSS-SCSE-EEEEEESSSCEE----
T ss_pred ecCCCCCCCCCCceEEEecc-------cCCCCeEEECC-CC-ccccCCEEEEEEEcCC-CCCE-EEEEECCccccc----
Confidence 9887542 334667788761 01255554333 22 2789999999999865 4566 999998864321
Q ss_pred eeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCC---ccceecEEEEEE
Q psy3823 273 SYSIQDGSTSVARYTPTSELEYGTLLCWARNEQ---GSQRTPCTFHVV 317 (365)
Q Consensus 273 ~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~---g~~~~~~~l~v~ 317 (365)
..........|.|.+++.+|+|.|+|.|.|.. ...+..+.|.|.
T Consensus 141 -~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 141 -QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp -EEEECSSEEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred -cccCCCceeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 11123445679999999999999999999865 234556666653
No 154
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.85 E-value=1.1e-20 Score=155.58 Aligned_cols=178 Identities=17% Similarity=0.171 Sum_probs=126.7
Q ss_pred ccceecCCcEEEEEE-EEecCC-CCeeEEEeCCeEEeeCCCCceEE--eeceEEEeeecCCCCeEEEEEEEcCCCCCC--
Q psy3823 129 ASVLNEGVDIYFDCH-IQANPP-YKKLIWTHNGITISNNASAGRII--TNQTLVLQSVTRHSGGLYACSAINSQGEGG-- 202 (365)
Q Consensus 129 ~~~~~~g~~v~l~C~-~~~~p~-~~~i~W~~~~~~l~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-- 202 (365)
...+.+|+.+.|.|. +.+.|. +. +.|++++..+.......... .+.+|.|.+++.+|+|.|+|.+.+..+...
T Consensus 17 ~~~v~~G~~v~L~C~~~~~~p~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 95 (201)
T 3s97_C 17 EVRVKEGKGMVLLCDPPYHFPDDLS-YRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVF 95 (201)
T ss_dssp CEEEETTCCEEECCCCCSEESSCCE-EEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEE
T ss_pred eEEEECCCCEEEeccccccCCCceE-EEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchh
Confidence 346889999999999 778877 55 99999987775322222222 367899999999999999999998765432
Q ss_pred cccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEE
Q psy3823 203 STPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTS 282 (365)
Q Consensus 203 s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s 282 (365)
...+.+.+.... .....+|.+..... ...+..|+.+.|.|.+.+.|.+. +.|++++...... ......+ .
T Consensus 96 ~~~~~~~~~~~~---~~~~~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~-v~W~~~~~~~~~~---~~~~~~~--~ 165 (201)
T 3s97_C 96 SKFIPLIPIPER---TTKPYPADIVVQFK-DVYALMGQNVTLECFALGNPVPD-IRWRKVLEPMPST---AEISTSG--A 165 (201)
T ss_dssp CCCEEEEEECCS---SCCCEEEEEEEECC-CEEEETTCCEEEEEEEEEESCCE-EEEEETTBCCCTT---CEEETTT--T
T ss_pred hcccceeecccc---ccCCCCCceEecCC-ceEEecCCcEEEEEEccCCCCCc-eEEEeCCCcCCCc---eeecCCC--C
Confidence 133444443100 00012333333333 33488999999999999999998 9999988743221 2222222 3
Q ss_pred EEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 283 VARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 283 ~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
.|.|.++..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 166 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 166 VLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 59999999999999999999999999998888875
No 155
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.85 E-value=1.9e-20 Score=150.17 Aligned_cols=164 Identities=16% Similarity=0.220 Sum_probs=122.3
Q ss_pred CCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEE
Q psy3823 116 KPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAI 195 (365)
Q Consensus 116 ~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 195 (365)
+|.+.+.+. ...+.+|+.+.|.|.+.+.|.+..+.|+++|..+... ...+.+.+++..|+|.|+|.+.
T Consensus 4 ~p~i~~~p~----~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~--------~~~~~~~~~~~~d~G~Y~C~~~ 71 (170)
T 3ry4_A 4 KAVLKLEPP----WINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH--------TQPSYRFKANNNDSGEYTCQTG 71 (170)
T ss_dssp BCEEEEESC----CSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC--------CSSEEEEECCGGGCEEEEEEET
T ss_pred CCEEEeCCC----CeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC--------ccceEEEecccccCeEEEEEEe
Confidence 556666653 2468899999999999988744459999999988642 3456778999999999999998
Q ss_pred cCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCCceeEEEeCCCCCCCCCCcee
Q psy3823 196 NSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNNSDTAPRPLTSY 274 (365)
Q Consensus 196 ~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~W~~~~~~~~~~~~~~~ 274 (365)
+... +..+.|.|. ..|.+...+.. .+..|+.+.|.|.+.+ .|.+. +.|+++|....
T Consensus 72 ~~~~---s~~~~l~v~----------~~~~~~~~~~~--~~~~g~~~~l~C~~~~~~p~~~-~~W~~~g~~~~------- 128 (170)
T 3ry4_A 72 QTSL---SDPVHLTVL----------FEWLVLQTPHL--EFQEGETIMLRCHSWKDKPLVK-VTFFQNGKSQK------- 128 (170)
T ss_dssp TSBC---CCCEEEEEE----------CCSEEEECSCS--EECTTCCEEEEEEEGGGCCEEE-EEEEETTEEEE-------
T ss_pred CCCc---eEeEEEEEE----------CCceEecCCCc--eeecCCeEEEEEECCCCCCCce-EEEEECCeEcc-------
Confidence 6433 345788888 66654433322 2778999999999954 45576 99999876321
Q ss_pred EeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcc-ceecEEEEE
Q psy3823 275 SIQDGSTSVARYTPTSELEYGTLLCWARNEQGS-QRTPCTFHV 316 (365)
Q Consensus 275 ~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~v 316 (365)
.......|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 129 --~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 129 --FSHLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp --EESSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --ccCCCCeEEEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 1112345999999999999999999999997 556666665
No 156
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.85 E-value=4.6e-21 Score=159.46 Aligned_cols=174 Identities=16% Similarity=0.211 Sum_probs=126.7
Q ss_pred cceecCCcEEEEEEEEecCCC---CeeEEEe----------------CCeEEee---CCCCceEE-------eeceEEEe
Q psy3823 130 SVLNEGVDIYFDCHIQANPPY---KKLIWTH----------------NGITISN---NASAGRII-------TNQTLVLQ 180 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~---~~i~W~~----------------~~~~l~~---~~~~~~~~-------~~~~l~i~ 180 (365)
..+.+|+++.|.|.+.+.+.. ..+.|++ ++..+.. ....+... .+.+|.|.
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~ 89 (214)
T 3jz7_A 10 IEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVT 89 (214)
T ss_dssp EEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEEC
T ss_pred EEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEc
Confidence 357899999999999876632 3499988 3433321 00112222 24679999
Q ss_pred eecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEE-eeeCCCceeEE
Q psy3823 181 SVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTV-DANPQAQYFTW 259 (365)
Q Consensus 181 ~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~~W 259 (365)
+++.+|+|.|+|.+.+..+... ..+.|.|. .+|.+........ +..|+.+.|.|.+ .+.|.+. +.|
T Consensus 90 ~v~~~D~G~Y~C~~~~~~~~~~-~~~~l~V~----------~~p~~~~~~~~~~-~~~g~~v~l~C~~~~g~p~~~-v~W 156 (214)
T 3jz7_A 90 NLQLSDIGTYQCKVKKAPGVAN-KKFLLTVL----------VKPSGTRCFVDGS-EEIGNDFKLKCEPKEGSLPLQ-FEW 156 (214)
T ss_dssp SCCGGGCEEEEEEEEETTEEEE-EEEEEEEE----------CCCBSCEEEEESC-CBTTCCEEEEEECSBCCSSCE-EEE
T ss_pred cCChhhCeEEEEEEEeCCCccc-cEEEEEEE----------cCCCCceeeeecc-eecCCcEEEEecCCCCCCCCE-EEE
Confidence 9999999999999999877553 67888888 7776554332222 7889999999999 8899998 999
Q ss_pred EeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 260 AFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
++++........... .. ....|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 157 ~~~~~~~~~~~~~~~-~~--~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 157 QKLSDSQTMPTPWLA-EM--TSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp EECSTTCCCCGGGGG-GT--TSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred EECCCCCccCcccee-cc--CCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 997653332221111 11 1226999999999999999999999999999888888743
No 157
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.85 E-value=7e-20 Score=157.38 Aligned_cols=165 Identities=15% Similarity=0.145 Sum_probs=127.0
Q ss_pred CeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEc
Q psy3823 117 PSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAIN 196 (365)
Q Consensus 117 p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 196 (365)
|.+.+.+ ....+.+|+.+.|.|.+.+.|.+..+.|+++|..+... +..|.|.+++.+|+|.|+|.+.+
T Consensus 2 P~i~~~p----~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~--------~~~l~i~~~~~~d~G~Y~C~~~~ 69 (262)
T 3rjd_A 2 AVITLQP----PWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS--------TPSYRITSASVNDSGEYRCQRGL 69 (262)
T ss_dssp CEEEESS----CCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC--------SSEEEESSCCGGGCEEEEEEESS
T ss_pred CeEecCC----CcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc--------CCeEEEecCCcccCeEEEEEEec
Confidence 5555544 33468899999999999988877459999999987542 46799999999999999999987
Q ss_pred CCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEE-eeeCCCceeEEEeCCCCCCCCCCceeE
Q psy3823 197 SQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTV-DANPQAQYFTWAFNNSDTAPRPLTSYS 275 (365)
Q Consensus 197 ~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~~W~~~~~~~~~~~~~~~~ 275 (365)
..+ +..+.|.|. .++....... ..+.+|+.+.|.|.+ .+.|.+. +.|+++|....
T Consensus 70 ~~~---s~~~~l~v~----------~~~~~~~~~~--~~~~~g~~v~l~C~~~~~~p~~~-v~W~~~g~~~~-------- 125 (262)
T 3rjd_A 70 SGR---SDPIQLEIH----------RGWLLLQVSS--RVFTEGEPLALRCHAWKDKLVYN-VLYYRNGKAFK-------- 125 (262)
T ss_dssp SCC---CCCEEEEEE----------CSSEEEEESC--SEEETTSCEEEEEEEGGGCCCEE-EEEEETTEEEE--------
T ss_pred CCc---cccEEEEEe----------ccceEecCCC--eEEecCCeEEEEEEccCCCCCce-EEEEECCcccc--------
Confidence 554 345778887 5554433322 227799999999999 5677777 99999875321
Q ss_pred eeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEc
Q psy3823 276 IQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 276 ~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
.......|.|.+++.+|+|.|+|.|.|..+..+..+.|.|..
T Consensus 126 -~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~ 167 (262)
T 3rjd_A 126 -FFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKE 167 (262)
T ss_dssp -EEEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEEC
T ss_pred -ccCCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEecc
Confidence 111123499999999999999999999999888888888875
No 158
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.85 E-value=4.6e-20 Score=153.65 Aligned_cols=169 Identities=14% Similarity=0.252 Sum_probs=120.3
Q ss_pred EEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-CC------------CCCceeEecCCeEEEEEEccCCCCCCeEEEE
Q psy3823 21 IYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-AP------------RPLTSYSIQDGSTSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 21 ~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 87 (365)
.+.+.+|+.++|.|.+.+.|.+ .+.|+|..... .. ...............|.|.+++.+|+|.|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDV-YVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYC 87 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTS-CEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCc-eEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEE
Confidence 6788999999999998788888 99999932110 10 1111111123445589999999999999999
Q ss_pred EEEeCCC---CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEEeCCeEEe
Q psy3823 88 WARNEQG---NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWTHNGITIS 163 (365)
Q Consensus 88 ~a~~~~~---~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~~~~l~ 163 (365)
.+.+..+ .....+.|.|.. .+..+|.+.+.+.. ..+.+|+.++|.|.+.+. |++..+.|+++|..+.
T Consensus 88 ~~~~~~~~~~~~~~~~~l~V~~-----~~~~~P~i~~~~~~----~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 158 (213)
T 3mj8_L 88 QSWDGTNSAWVFGSGTKVTVLG-----QPNAAPSVTLFPPS----SEELKTNQATLVCMINGFYPADVAVTWEADGTPIT 158 (213)
T ss_dssp EEEETTTTEEEEBCCEEEEEEC-----SCCBCCEEEEECCC----HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred EeccCCcceeEEcCceEEEEeC-----CCCCCCeEEccCCC----cccccCCcEEEEEEeeceeCCCeEEEEEcCCcccC
Confidence 9999887 233667888831 11257777765532 345589999999999985 4444599999999885
Q ss_pred eCC-------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 164 NNA-------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 164 ~~~-------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
... ..........|.|.++..+|+|.|+|.|.|..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 201 (213)
T 3mj8_L 159 QGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGN 201 (213)
T ss_dssp TTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTE
T ss_pred CCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCc
Confidence 311 111222245689999999999999999999875
No 159
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.85 E-value=9.8e-21 Score=154.15 Aligned_cols=163 Identities=15% Similarity=0.139 Sum_probs=118.0
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+|.+...+. ..+.+|++++|.|.+.+ +.+. +.|+++|.. .......|.|.+++..|+|.|+|.
T Consensus 6 ~~~P~i~~~p~-----~~v~~G~~v~L~C~~~~-~~~~-~~W~k~g~~--------~~~~~~~L~i~~v~~~D~G~Y~C~ 70 (184)
T 2gi7_A 6 LPKPSLQALPS-----SLVPLEKPVTLRCQGPP-GVDL-YRLEKLSSS--------RYQDQAVLFIPAMKRSLAGRYRCS 70 (184)
T ss_dssp BCCCEEEEESC-----SEEETTCCEEEEEECST-TCSE-EEEEETTTC--------CEESSSEEEESSCCGGGCEEEEEE
T ss_pred CCCCeEEeCCC-----ccccCCCcEEEEEeCCC-CCCE-EEEEECCcc--------ccCcccEEEECcCChhhCceEEEE
Confidence 45777777653 26889999999999877 5554 999998865 123457899999999999999999
Q ss_pred EEcCCCC-CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCc
Q psy3823 194 AINSQGE-GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLT 272 (365)
Q Consensus 194 ~~~~~~~-~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~ 272 (365)
+.|..|. ..+..+.|.|.. ...+|.+...+ . ..+..|+.++|.|.+.+.| +. +.|+++|.......
T Consensus 71 a~n~~g~~~~s~~~~l~V~~-------~~~~p~i~~~p-~-~~v~~G~~v~l~C~~~~~~-~~-~~w~k~g~~~~~~~-- 137 (184)
T 2gi7_A 71 YQNGSLWSLPSDQLELVATG-------VFAKPSLSAQP-G-PAVSSGGDVTLQCQTRYGF-DQ-FALYKEGDPAPYKN-- 137 (184)
T ss_dssp EEETTEEBCCCCCEEEEEES-------SSCCCEEEEEC-C-CSSCCTTCEEEEEECSSCC-CE-EEEEECCCCTTSCC--
T ss_pred EEcCCCccCCCCCEEEEecC-------cCCCCEEEeCC-C-ceecCCCcEEEEEEcCCCC-cE-EEEEECCCcCccee--
Confidence 9998763 344667787751 01345554333 2 2377999999999987554 56 99999987543311
Q ss_pred eeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 273 SYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 273 ~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
.. ......|.|.+++.+|+|.|+|.|.|..+.
T Consensus 138 ~~---~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~ 169 (184)
T 2gi7_A 138 PE---RWYRASFPIITVTAAHSGTYRCYSFSSRDP 169 (184)
T ss_dssp CC---EEEEESSSEEEETTCCSEEEEEEEECTTST
T ss_pred cC---CCceEEEEEccCCccCCeEEEEEEEeCCCC
Confidence 11 112334889999999999999999998653
No 160
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.85 E-value=2.2e-21 Score=161.42 Aligned_cols=176 Identities=15% Similarity=0.251 Sum_probs=123.1
Q ss_pred CceEEEEecCCcEEEEEEeCCCC----CcceEEEEeCCCcC---------------CCC-----CCceeEec---CCeEE
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANP----QAQYFTWAFNNSGT---------------APR-----PLTSYSIQ---DGSTS 70 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p----~~~~v~W~~~~~~~---------------l~~-----~~~~~~~~---~~~~~ 70 (365)
.+..+.+.+|+.++|.|...+.| .+ .+.|++++... +.. ........ .....
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 84 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPL-DIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDA 84 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCC-EEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcE-EEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcc
Confidence 34667889999999999977666 35 99999854220 110 01111111 11234
Q ss_pred EEEEccCCCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEE-EecCC
Q psy3823 71 VARYTPTSELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI-QANPP 149 (365)
Q Consensus 71 ~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~ 149 (365)
+|.|.+++.+|+|.|+|.+.+..+.....+.|.| ..+|.+...+ ....+.+|+.+.|.|.+ .+.|.
T Consensus 85 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V---------~~~p~~~~~~----~~~~~~~g~~v~l~C~~~~g~p~ 151 (214)
T 3jz7_A 85 SINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTV---------LVKPSGTRCF----VDGSEEIGNDFKLKCEPKEGSLP 151 (214)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE---------ECCCBSCEEE----EESCCBTTCCEEEEEECSBCCSS
T ss_pred cEEEccCChhhCeEEEEEEEeCCCccccEEEEEE---------EcCCCCceee----eecceecCCcEEEEecCCCCCCC
Confidence 7999999999999999999998877778888888 4445432222 11246789999999999 68887
Q ss_pred CCeeEEEeCC--eEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 150 YKKLIWTHNG--ITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 150 ~~~i~W~~~~--~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
+. +.|++++ ..+.. .......++.|.|.++..+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 152 ~~-v~W~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~ 211 (214)
T 3jz7_A 152 LQ-FEWQKLSDSQTMPT--PWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQ-CMLRLDVV 211 (214)
T ss_dssp CE-EEEEECSTTCCCCG--GGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEE-EEEEECCB
T ss_pred CE-EEEEECCCCCccCc--cceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEE-EEEEEEEe
Confidence 77 9999954 33321 111222356899999999999999999999998664 56666665
No 161
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.85 E-value=1.1e-20 Score=158.18 Aligned_cols=183 Identities=13% Similarity=0.095 Sum_probs=125.1
Q ss_pred ccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEE--EEEEccCCCCCCeEEE
Q psy3823 9 TDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTS--VARYTPTSELEYGTLL 86 (365)
Q Consensus 9 ~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~ 86 (365)
...|.+..... ..+.+|++++|.|.+.+ +.+ .|.|+|++.. +....... ....... .|.|.+++.+|+|.|+
T Consensus 7 ~~~P~i~~~p~--~~v~~G~~vtL~C~~~~-~~~-~~~W~k~g~~-~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~ 80 (218)
T 1uct_A 7 FPMPFISAKSS--PVIPLDGSVKIQCQAIR-EAY-LTQLMIIKNS-TYREIGRR-LKFWNETDPEFVIDHMDANKAGRYQ 80 (218)
T ss_dssp SCCCCEEESSC--SEEETTCCEEEEECCCT-TCS-EEEEEEEETT-EEEECSEE-CC----CCCEEEECSCCGGGCEEEE
T ss_pred CCCCEEEecCC--CccCCCCCEEEEEEcCC-CCC-EEEEEECCCc-cccccccc-CCCCcceeeEEEEcccccccCEEEE
Confidence 34555544322 36789999999999765 666 9999999877 53221111 1112223 7999999999999999
Q ss_pred EEEEeCCCCC--cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEee
Q psy3823 87 CWARNEQGNQ--RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISN 164 (365)
Q Consensus 87 C~a~~~~~~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~ 164 (365)
|.+.+..+.. ...+.|.|... ..+|.+...+ ...+.+|++++|.|...+.+.+. +.|+++|..+..
T Consensus 81 C~a~n~~~~~~~s~~~~l~V~~~------~~~P~i~~~p-----~~~v~~G~~v~L~C~~~~~~~~~-~~W~k~g~~~~~ 148 (218)
T 1uct_A 81 CQYRIGHYRFRYSDTLELVVTGL------YGKPFLSADR-----GLVLMPGENISLTCSSAHIPFDR-FSLAKEGELSLP 148 (218)
T ss_dssp EEEEETTTEEEECCCEEEEEECS------SCCCEEEESS-----CSEECTTCCCEEEEECSSSCCSE-EEEEETTCSSCC
T ss_pred EEEEcCCCceeecCCEEEEEcCc------ccCCEEEeCC-----CCccCCCCCEEEEEeCCCCCCCE-EEEEECCCcccc
Confidence 9999976532 35677877311 2356655433 23678999999999766656554 999999986643
Q ss_pred CCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCC----CCCcccEEEEEe
Q psy3823 165 NASAGRIITNQTLVLQSVTRHSGGLYACSAINSQG----EGGSTPFDLNIN 211 (365)
Q Consensus 165 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~s~~~~l~v~ 211 (365)
. .........|.|.+++.+|+|.|+|.+.+... ...+..+.|.|.
T Consensus 149 ~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (218)
T 1uct_A 149 Q--HQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVT 197 (218)
T ss_dssp S--EEECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC
T ss_pred c--ccCCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEe
Confidence 1 11112357899999999999999999997632 244567777776
No 162
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.85 E-value=1.7e-21 Score=161.58 Aligned_cols=181 Identities=20% Similarity=0.319 Sum_probs=129.8
Q ss_pred CeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCC----------CC-CceeEecCCeEEEEEEccCCCC
Q psy3823 12 PVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAP----------RP-LTSYSIQDGSTSVARYTPTSEL 80 (365)
Q Consensus 12 p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~----------~~-~~~~~~~~~~~~~l~i~~~~~~ 80 (365)
+......+..+.+.+|+.+.|.|.+.+.|.+ .+.|++++.. +. .. ........ ..|.|.+++.+
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~---~~L~i~~~~~~ 78 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSP-RVEWKFDQGD-TTRLVCYNNKITASYEDRVTFLP---TGITFKSVTRE 78 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSE-EEEEEEEETT-EEEESEETTEECTTTTTTCEEET---TEEECSCCCTT
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCc-EEEEEEcCCc-eeEEEEecCccCccccCceEeec---cEEEEeeCCHH
Confidence 3344455667778999999999997788888 9999998765 21 00 11111122 38999999999
Q ss_pred CCeEEEEEEEeCCCCC--cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEE-EecCCCCeeEEEe
Q psy3823 81 EYGTLLCWARNEQGNQ--RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI-QANPPYKKLIWTH 157 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~i~W~~ 157 (365)
|+|.|+|.+.+..+.. ...+.|.| ..+|.+.... ....+.+|+.+.|.|.+ .+.|.+. +.|++
T Consensus 79 d~G~Y~C~~~~~~g~~~~~~~~~l~V---------~~~p~~~~~~----~~~~~~~g~~~~l~C~~~~~~p~~~-v~W~~ 144 (209)
T 1nbq_A 79 DTGTYTCMVSEEGGNSYGEVKVKLIV---------LVPPSKPTVN----IPSSATIGNRAVLTCSEQDGSPPSE-YTWFK 144 (209)
T ss_dssp SCSEEEEEEEETTSSCEECCEEECCE---------EBCCCCCCCC----CBSEEETTSCEEECCCCCSCBSCCE-EEEEE
T ss_pred HCcEEEEEEecCCCCccceEEEEEEE---------ecCCcCCCcc----cccceecCCEEEEEEeCCCCCCCce-eEEEE
Confidence 9999999999986633 36677777 3444432221 22357889999999997 7888886 99999
Q ss_pred CCeEEeeCCCC---------ceEEeeceEEEeeecCCCCeEEEEEEEcCCCCC-CcccEEEEEe
Q psy3823 158 NGITISNNASA---------GRIITNQTLVLQSVTRHSGGLYACSAINSQGEG-GSTPFDLNIN 211 (365)
Q Consensus 158 ~~~~l~~~~~~---------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~s~~~~l~v~ 211 (365)
++..+...... ........|.|.++..+|+|.|+|.|.|..|.. .+..+.|.|.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 145 DGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp TTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred CCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 99887643321 011135689999999999999999999999977 4455555554
No 163
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.85 E-value=4.2e-20 Score=164.62 Aligned_cols=170 Identities=16% Similarity=0.111 Sum_probs=123.4
Q ss_pred EEEecCCcEEEEEEeCCCC-CcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeC--CCCCcc
Q psy3823 22 YGALRNEQVLVSCTVDANP-QAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNE--QGNQRT 98 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~p-~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~--~~~~~~ 98 (365)
..+.+|+.+.|.|.+.+.| .+ .++|++++.. +..........+. .|.|.+++.+|+|.|+|.|.|. .+....
T Consensus 138 ~~~~~G~~v~L~C~~~g~p~~~-~i~W~k~~~~-l~~~~~~~~~~~~---~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~ 212 (329)
T 3oq3_B 138 LGTHDKYGIDLYCGILYAKHYN-NITWYKNNQE-LIIDGTKYSQSGQ---NLIIHNPELEDSGRYDCYVHYDDVRIKNDI 212 (329)
T ss_dssp TTSSTTTCEEEECCCCSCCCCC-EEEEEETTEE-CCCSSSSEEEETT---EEEECSCCGGGCEEEEEEEEECCTTSSSCE
T ss_pred eEEeCCCcEEEEeccCCCCCCc-eEEEEECCcc-CCCCCceEecCCC---EEEEeecChhhCEEEEEEEEecccCCCcee
Confidence 3467899999999988899 78 9999999988 6433322222344 8999999999999999999987 655443
Q ss_pred ----cEEEEEEeccccCCCCCCCe---EEEEcCCccCccceecCCcEEEEEEEEecC---CCCeeEEEeCCeEEeeCCCC
Q psy3823 99 ----PCTFHVVKAGECEHPVDKPS---VQIKLGRNLNASVLNEGVDIYFDCHIQANP---PYKKLIWTHNGITISNNASA 168 (365)
Q Consensus 99 ----~~~l~V~~~~~~~~~~~~p~---~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p---~~~~i~W~~~~~~l~~~~~~ 168 (365)
.+.|.| ..+|. ..+.+ ....+.+|+.+.|.|.+.+.| .+..+.|+++|..+......
T Consensus 213 ~~s~~~~l~V---------~~~~~~~~~~~~~----~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~ 279 (329)
T 3oq3_B 213 VVSRCKILTV---------IPSQDHRFKLILD----PKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFG 279 (329)
T ss_dssp EEEEEEEEEE---------ECCCCCCEEEECC----SEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSS
T ss_pred EEEeeEEEEE---------ECCCCCCCceecC----CeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCc
Confidence 366777 33331 11222 335688999999999999988 44258999999875332222
Q ss_pred ceEE-------eeceEEEeeecCCCCe-EEEEEEEcCCCCCCcccEEEEE
Q psy3823 169 GRII-------TNQTLVLQSVTRHSGG-LYACSAINSQGEGGSTPFDLNI 210 (365)
Q Consensus 169 ~~~~-------~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~s~~~~l~v 210 (365)
.... ....|.|.+++.+|+| .|+|.|.|..|... ..+.|.|
T Consensus 280 ~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~-~~~~l~v 328 (329)
T 3oq3_B 280 VYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKT-LTTTVVL 328 (329)
T ss_dssp EEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEE-EEEEEEE
T ss_pred eeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceE-EEEEEEe
Confidence 1111 3578999999999999 99999999988654 3444443
No 164
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.84 E-value=1.3e-20 Score=155.70 Aligned_cols=170 Identities=12% Similarity=0.193 Sum_probs=121.5
Q ss_pred cceecCCcEEEEEEEEecCC-----CCeeEEEeCCeEEeeCCCCceEE------eeceEEEeeecCCCCeEEEEEEEcCC
Q psy3823 130 SVLNEGVDIYFDCHIQANPP-----YKKLIWTHNGITISNNASAGRII------TNQTLVLQSVTRHSGGLYACSAINSQ 198 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~-----~~~i~W~~~~~~l~~~~~~~~~~------~~~~l~i~~~~~~d~G~Y~C~~~~~~ 198 (365)
..+.+|+++.|.|.+.+.|. +. +.|++++............. .+.+|.|.+++..|+|.|+|.+.+..
T Consensus 12 v~v~~G~~v~L~C~~~~~p~~~~~~~~-v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 90 (202)
T 3bp6_B 12 YTVDVGSSVSLECDFDRRECTELEGIR-ASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGA 90 (202)
T ss_dssp EEEETTSCEEEEEEECTTC---CTTEE-EEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEeCCCcEEEEEEecCCCCCCccceE-EEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCC
Confidence 35789999999999988764 44 99999443332222211111 23689999999999999999999987
Q ss_pred CCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeC
Q psy3823 199 GEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQD 278 (365)
Q Consensus 199 ~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~ 278 (365)
+.. +..+.|.|. ..+... ......+..|+.+.|.|.+.|.|.|. +.|++++.... .......+
T Consensus 91 ~~~-~~~~~l~V~----------~~~~~p--~~~~~~~~~g~~v~l~C~~~g~P~p~-v~W~~~~~~~~---~~~~~~~~ 153 (202)
T 3bp6_B 91 AWD-YKYLTVKVK----------ASYMRI--DTRILEVPGTGEVQLTCQARGYPLAE-VSWQNVSVPAN---TSHIRTPE 153 (202)
T ss_dssp EEE-EEEEEEEEE----------BCCCCE--EEEEEECTTTCCEEEEEEEEEBSCCE-EEETTCCSCCE---EEEEECTT
T ss_pred Ccc-eEEEEEEec----------CCCCcc--cEEEEecCCCCeEEEEEEccccCCce-EEEEeCCCCcc---CceeeCCC
Confidence 754 366778877 333211 11111256899999999999999998 99999765321 11222345
Q ss_pred CCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 279 GSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 279 ~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
+....+.+..+..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 154 ~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~ 192 (202)
T 3bp6_B 154 GLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPL 192 (202)
T ss_dssp SCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC-
T ss_pred CCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEec
Confidence 556778888899999999999999999999888877664
No 165
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.84 E-value=2.1e-20 Score=156.37 Aligned_cols=184 Identities=12% Similarity=0.177 Sum_probs=125.1
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCc-eEEeec--eEEEeeecCCCCeEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAG-RIITNQ--TLVLQSVTRHSGGLY 190 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~-~~~~~~--~l~i~~~~~~d~G~Y 190 (365)
..+|.+...+. ..+.+|++|+|.|.+.+ +.+. +.|+++|..+....... ...... .|.|.+++..|+|.|
T Consensus 7 ~~~P~i~~~p~-----~~v~~G~~vtL~C~~~~-~~~~-~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 79 (218)
T 1uct_A 7 FPMPFISAKSS-----PVIPLDGSVKIQCQAIR-EAYL-TQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRY 79 (218)
T ss_dssp SCCCCEEESSC-----SEEETTCCEEEEECCCT-TCSE-EEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEE
T ss_pred CCCCEEEecCC-----CccCCCCCEEEEEEcCC-CCCE-EEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEE
Confidence 45777766543 36889999999999876 4444 99999887664322100 112244 899999999999999
Q ss_pred EEEEEcCCCC-CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCC
Q psy3823 191 ACSAINSQGE-GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPR 269 (365)
Q Consensus 191 ~C~~~~~~~~-~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~ 269 (365)
+|.+.|..+. ..+..+.|.|.. ...+|.+...+ .. .+.+|+.++|.|...+.|.+. +.|+++|.....
T Consensus 80 ~C~a~n~~~~~~~s~~~~l~V~~-------~~~~P~i~~~p-~~-~v~~G~~v~L~C~~~~~~~~~-~~W~k~g~~~~~- 148 (218)
T 1uct_A 80 QCQYRIGHYRFRYSDTLELVVTG-------LYGKPFLSADR-GL-VLMPGENISLTCSSAHIPFDR-FSLAKEGELSLP- 148 (218)
T ss_dssp EEEEEETTTEEEECCCEEEEEEC-------SSCCCEEEESS-CS-EECTTCCCEEEEECSSSCCSE-EEEEETTCSSCC-
T ss_pred EEEEEcCCCceeecCCEEEEEcC-------cccCCEEEeCC-CC-ccCCCCCEEEEEeCCCCCCCE-EEEEECCCcccc-
Confidence 9999997652 234567777761 01245554333 22 378999999999776677777 999999875432
Q ss_pred CCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCc-----cceecEEEEEEcC
Q psy3823 270 PLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG-----SQRTPCTFHVVKA 319 (365)
Q Consensus 270 ~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~~ 319 (365)
. .. .......|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|...
T Consensus 149 -~-~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 149 -Q-HQ--SGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp -S-EE--ECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred -c-cc--CCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 1 11 223345799999999999999999998642 2345666666543
No 166
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.84 E-value=3.5e-20 Score=163.45 Aligned_cols=190 Identities=13% Similarity=0.112 Sum_probs=129.8
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeC-CCCCcceEEEEeCCCcCCCCCCceeEe--cCCeEEEEEEccCCCCCCeEEEE
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVD-ANPQAQYFTWAFNNSGTAPRPLTSYSI--QDGSTSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~~v~W~~~~~~~l~~~~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C 87 (365)
.|......+....+.+|+.+.|.|.+. +.|.+ .+.|++++.. +......... .......|.|.+++.+|+|.|+|
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~-~v~W~~~~~~-i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 183 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNA-KVNYIFNEKE-IFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTF 183 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSC-EEEEEETTEE-ECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEE
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCC-EEEEEECCEE-CeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEE
Confidence 444333233477789999999999977 88998 9999999988 6654433222 22445679999999999999999
Q ss_pred EEEeCCCCCcccEEEEEEecc--------c----cCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEE
Q psy3823 88 WARNEQGNQRTPCTFHVVKAG--------E----CEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIW 155 (365)
Q Consensus 88 ~a~~~~~~~~~~~~l~V~~~~--------~----~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W 155 (365)
.+.+.. ......+.+.... . ......+|.+.... ...+.+|+.+.|.|.+.+.|.+..+.|
T Consensus 184 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~~~v~~G~~~~l~C~~~~~p~~~~v~W 256 (312)
T 2y23_A 184 QLQDGK--ATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-----SWEVTGECNVLLKCKVANIKKETHIVW 256 (312)
T ss_dssp EEESSS--CEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-----EEEEETTTEEEEEEEEESCCSSCEEEE
T ss_pred EEEeCC--ceEEEEEEEcchhhhhhcccccccccchhhccCCceeecc-----eEEEeCCCEEEEEEEEcCCCCCCEEEE
Confidence 997533 2233333331000 0 00001135433211 136789999999999999888845999
Q ss_pred EeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEE
Q psy3823 156 THNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNI 210 (365)
Q Consensus 156 ~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v 210 (365)
++++..+..............|.|.+++.+|+|.|+|.|.|..|... ..+.|.+
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~i 310 (312)
T 2y23_A 257 YKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDK-SRLKLVD 310 (312)
T ss_dssp EETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEE-EEEEECS
T ss_pred eeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCcee-eeeEEEe
Confidence 99999997544433333357999999999999999999999999765 4455543
No 167
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.84 E-value=1.1e-19 Score=150.04 Aligned_cols=171 Identities=16% Similarity=0.183 Sum_probs=116.1
Q ss_pred EEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCce-eEecCCeEEEEEEccCCCCCCeEEEEEEEeCCC-----C
Q psy3823 22 YGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTS-YSIQDGSTSVARYTPTSELEYGTLLCWARNEQG-----N 95 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~-----~ 95 (365)
..+.+|++++|.|.+. .|.+ .+.|+|++.. +...... ..........|.|.+++.+|+|.|+|.+.+... .
T Consensus 17 ~~v~~G~~v~L~C~~~-~~~~-~~~w~k~g~~-~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~ 93 (201)
T 1nkr_A 17 PLVKSEETVILQCWSD-VMFE-HFLLHREGMF-NDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSA 93 (201)
T ss_dssp SEEETTCCEEEEEEES-SCCS-EEEEEEESSS-CEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCC
T ss_pred CccCCCCcEEEEEecc-CCCC-EEEEEECCCc-CCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccC
Confidence 5578999999999976 4677 9999999886 4321110 111223445899999999999999999986432 2
Q ss_pred CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEE---
Q psy3823 96 QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRII--- 172 (365)
Q Consensus 96 ~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~--- 172 (365)
....+.|.|... ..+|.+...+. ..+.+|+.++|.|.+.+ +.+. +.|+++|..+..........
T Consensus 94 ~s~~~~l~V~~~------~~~p~i~~~p~-----~~v~~G~~v~L~C~~~~-~~~~-~~w~k~g~~~~~~~~~~~~~~~~ 160 (201)
T 1nkr_A 94 PSDPLDIVIIGL------YEKPSLSAQPG-----PTVLAGENVTLSCSSRS-SYDM-YHLSREGEAHERRLPAGPKVNGT 160 (201)
T ss_dssp CCCCEEEEEECS------SCCCEEEEESC-----SEECTTCEEEEEEEESS-CCSE-EEEEETTCSSCEEEECEEEETTE
T ss_pred CCCCEEEEeecc------CCCCceecCCC-----CccCCCCeEEEEEeCCC-CCce-EEEEECCcccCcccccccccCCc
Confidence 236677887321 23577666542 25789999999999876 4444 99999987654311111111
Q ss_pred eeceEEEeeecCCCCeEEEEEEEcCC----CCCCcccEEEEE
Q psy3823 173 TNQTLVLQSVTRHSGGLYACSAINSQ----GEGGSTPFDLNI 210 (365)
Q Consensus 173 ~~~~l~i~~~~~~d~G~Y~C~~~~~~----~~~~s~~~~l~v 210 (365)
....|.|.+++ |+|.|+|.+.+.. ....+..+.|.|
T Consensus 161 ~~~~L~i~~v~--d~G~Y~C~a~~~~~~~~~s~~S~~~~l~V 200 (201)
T 1nkr_A 161 FQADFPLGPAT--HGGTYRCFGSFHDSPYEWSKSSDPLLVSV 200 (201)
T ss_dssp EEEEEEEEECC--SCEEEEEEEEETTEEEEECCCCCCEEEEE
T ss_pred eEEEEEeCCcC--CCeeEEEEEEcCCCCCcCCCCCCCEEEEe
Confidence 25689999998 9999999998653 223345555554
No 168
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.84 E-value=1.3e-20 Score=160.88 Aligned_cols=175 Identities=15% Similarity=0.213 Sum_probs=121.0
Q ss_pred CceEEEEecCCcEEEEEEeCC---CCCcceEEEEeCCCcCCC-----C------------------------CCceeEec
Q psy3823 18 QQRIYGALRNEQVLVSCTVDA---NPQAQYFTWAFNNSGTAP-----R------------------------PLTSYSIQ 65 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~---~p~~~~v~W~~~~~~~l~-----~------------------------~~~~~~~~ 65 (365)
.+..+.+.+|+.++|.|.+.+ .|.+ .+.|++++.. .. . ........
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 85 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPP-VISWLKGASP-DRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA 85 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCC-EEEEEEEEET-TEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECS
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCce-EEEEEeCCCC-CccEEEEeeccccccccccccccccccccCCCcCceEEec
Confidence 445678899999999999655 6777 9999998754 21 0 00000001
Q ss_pred CCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc-----ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEE
Q psy3823 66 DGSTSVARYTPTSELEYGTLLCWARNEQGNQR-----TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYF 140 (365)
Q Consensus 66 ~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~-----~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l 140 (365)
......|.|.+++.+|+|.|+|.+.+..+... ..+.|.|... ..+|.+.+... ....+.+|+.+.|
T Consensus 86 ~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~------~~~~~~~~~~~---~~~~v~~g~~v~L 156 (250)
T 2fbo_J 86 NLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH------TPSNNVHVSTA---EVVQVDEGNDITM 156 (250)
T ss_dssp CTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT------SCCSCCEECCC---SEEECCTTCCEEE
T ss_pred cCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc------CCCCeEEEecC---ceEEecCCCcEEE
Confidence 10123799999999999999999998777543 3777888211 11344444332 2345678999999
Q ss_pred EEEEEecCCCCeeEEEeCCeEEeeCCC----------------------CceEE-eeceEEEeeecCCCCeEEEEEEEcC
Q psy3823 141 DCHIQANPPYKKLIWTHNGITISNNAS----------------------AGRII-TNQTLVLQSVTRHSGGLYACSAINS 197 (365)
Q Consensus 141 ~C~~~~~p~~~~i~W~~~~~~l~~~~~----------------------~~~~~-~~~~l~i~~~~~~d~G~Y~C~~~~~ 197 (365)
.|.+.+.|.|. +.|++++..+..... ..... ....|.|.+++.+|+|.|+|.|.|.
T Consensus 157 ~C~~~g~p~p~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 235 (250)
T 2fbo_J 157 TCPCTDCANAN-VTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATG 235 (250)
T ss_dssp CCCEESCTTCE-EEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESS
T ss_pred EEEecCCCCCe-eEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCC
Confidence 99999988885 999999876643211 11111 2368999999999999999999998
Q ss_pred CCCCCcc
Q psy3823 198 QGEGGST 204 (365)
Q Consensus 198 ~~~~~s~ 204 (365)
.|...+.
T Consensus 236 ~g~~g~~ 242 (250)
T 2fbo_J 236 QGELDAD 242 (250)
T ss_dssp SSGGGEE
T ss_pred ccccCcc
Confidence 7754433
No 169
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.84 E-value=2.9e-20 Score=162.43 Aligned_cols=193 Identities=15% Similarity=0.105 Sum_probs=135.6
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCC--cceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCC
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ--AQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELE 81 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~--~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d 81 (365)
+.+.+...|......+....+.+|+.+.|.|.+.+ |. + .++|++++...+..........++ .|.|.+++.+|
T Consensus 81 ~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d 155 (292)
T 4dkd_C 81 IHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEA-GVSLVRVRGRPLMRHTNYSFSPWH---GFTIHRAKFIQ 155 (292)
T ss_dssp ECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGS-SEEEEEGGGCCCCSSCCEECCSSS---CCEETTCCGGG
T ss_pred EEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcce-eEEEEecCCCccccCCcccccCCc---eEEECCCCHHH
Confidence 34445555543333445677899999999999766 55 5 899999854425444333333333 49999999999
Q ss_pred CeEEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCe
Q psy3823 82 YGTLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGI 160 (365)
Q Consensus 82 ~G~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~ 160 (365)
+|.|+|.+.+..+... ..+.|.|... +..+|.+...+.. ..+.+|+.+.|.|.+.+.|++..+.|++++.
T Consensus 156 ~G~Y~C~a~n~~~~~~s~~~~l~V~~~-----~~~~p~i~~~~~~----~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~ 226 (292)
T 4dkd_C 156 SQDYQCSALMGGRKVMSISIRLKVQKV-----IPGPPALTLVPAE----LVRIRGEAAQIVCSASSVDVNFDVFLQHNNT 226 (292)
T ss_dssp CSEEEEEECSTTSCEECCCEEEEEECC-----CCSSCEEEEESSC----BCCCSSSCEEEEEEEEESSSCCEEECCBSSC
T ss_pred CeEEEEEEEeCCCceeEEEEEEEEeCC-----CCCCCeEEccCCc----eeEecCCCEEEEEEecCCCCceEEEEeCCCc
Confidence 9999999998766554 5888888310 0127777766533 3467999999999999888766688888887
Q ss_pred EEeeCCC----CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 161 TISNNAS----AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 161 ~l~~~~~----~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
.+..... .........|.|.+++.+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~ 280 (292)
T 4dkd_C 227 KLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHS-TSMFFRVV 280 (292)
T ss_dssp CCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEE-EEEEECC-
T ss_pred ccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCce-eEEEEEEe
Confidence 6542211 11122346899999999999999999999998754 56667666
No 170
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=4e-20 Score=151.06 Aligned_cols=170 Identities=15% Similarity=0.153 Sum_probs=119.2
Q ss_pred EEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCC--cccE
Q psy3823 23 GALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQ--RTPC 100 (365)
Q Consensus 23 ~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~--~~~~ 100 (365)
.+.+|++++|.|.+.+ +.. .+.|+|++.. +....... ........|.|.+++.+|+|.|+|.+.+..+.. ...+
T Consensus 14 ~v~~G~~v~L~C~~~~-~~~-~~~w~k~g~~-~~~~~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~ 89 (188)
T 1oll_A 14 MVPKEKQVTICCQGNY-GAV-EYQLHFEGSL-FAVDRPKP-PERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLL 89 (188)
T ss_dssp EEETTCCEEEEEECCT-TCC-EEEEEETTEE-EEEECCSS-CTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCE
T ss_pred cCCCCCCEEEEEecCC-CCC-EEEEEECCCc-cccccccc-CCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCce
Confidence 6789999999999764 345 8999999876 43110000 122344589999999999999999998865432 3667
Q ss_pred EEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEe
Q psy3823 101 TFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQ 180 (365)
Q Consensus 101 ~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~ 180 (365)
.|.|... ..+|.+...+ ...+.+|+.++|.|.+.+. ++ .+.|+++|..+... ......+..|.|.
T Consensus 90 ~l~V~~~------~~~p~i~~~p-----~~~v~~G~~v~L~C~~~~~-~~-~~~w~k~g~~~~~~--~~~~~~~~~L~I~ 154 (188)
T 1oll_A 90 DLVVTEM------YDTPTLSVHP-----GPEVISGEKVTFYCRLDTA-TS-MFLLLKEGRSSHVQ--RGYGKVQAEFPLG 154 (188)
T ss_dssp EEEEESC------SCCCEEEEES-----CSEEETTCEEEEEEECSSS-CS-EEEEEEESSSCEEE--EEECSSEEEEEEE
T ss_pred EEEeccc------CCCCeEEECC-----CCccccCCEEEEEEEcCCC-CC-EEEEEECCcccccc--ccCCCceeEEEEC
Confidence 8887311 2366665543 2357899999999997653 34 49999998766431 0111235789999
Q ss_pred eecCCCCeEEEEEEEcCCC--CCCcccEEEEEe
Q psy3823 181 SVTRHSGGLYACSAINSQG--EGGSTPFDLNIN 211 (365)
Q Consensus 181 ~~~~~d~G~Y~C~~~~~~~--~~~s~~~~l~v~ 211 (365)
+++.+|+|.|+|.+.|... ...+..+.|.|.
T Consensus 155 ~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 155 PVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp ECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred CCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 9999999999999997642 344566777764
No 171
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.84 E-value=1.5e-20 Score=166.25 Aligned_cols=180 Identities=13% Similarity=0.218 Sum_probs=130.7
Q ss_pred ecCCcEEEEEEeCC----------CCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 25 LRNEQVLVSCTVDA----------NPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 25 ~~G~~~~l~C~~~~----------~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
.+|+.+.|.|...+ .|.+ .++|++++.. +...........+....|.|.+++.+|.|.|+|.|.|..+
T Consensus 111 ~~g~~~~l~c~~~~~~l~c~~~~~~p~~-~i~W~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 188 (317)
T 2y25_A 111 LSATDLKIQSTAEGIQLYSFVTYYVEDL-KVNWSHNGSA-IRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKT 188 (317)
T ss_dssp TCBCCCEEEECSSEEEEEEEBSSCCSSC-EEEEEESSSB-CCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSC
T ss_pred ccCCCeEEEeeccccEEEEEeccCCCCc-EEEEEECCEE-CCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCc
Confidence 46788888887655 6888 9999999998 7665554444555566899999999999999999999887
Q ss_pred CCcccEEEEEEeccc-----------cCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEe
Q psy3823 95 NQRTPCTFHVVKAGE-----------CEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITIS 163 (365)
Q Consensus 95 ~~~~~~~l~V~~~~~-----------~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~ 163 (365)
.....+.|.|..... ...+..+|.+...+. ....+.+|+.+.|.|.+.|+|.+. +.|+++|..+.
T Consensus 189 ~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~~v~~g~~~~l~C~~~g~p~p~-i~W~~~g~~~~ 264 (317)
T 2y25_A 189 GHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLP---DVVTIQEGKALNLTCNVWGDPPPE-VSWLKNEKALA 264 (317)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCC---SEEEEETTSBBCEEEEEECSSCCE-EEEEESSSEEC
T ss_pred eEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCC---ccEEEEcCCEEEEEEEEecCCCCE-EEEEECCEeCC
Confidence 766666665420000 000012344333222 234678999999999999999887 99999999986
Q ss_pred eCCCCceEEe---eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 164 NNASAGRIIT---NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 164 ~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
.......... ...|.|.+++..|+|.|+|.|.|..|... ..+.|.|.
T Consensus 265 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~ 314 (317)
T 2y25_A 265 SDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSET-SDFTVSVF 314 (317)
T ss_dssp CCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEE-EEEEEEEE
T ss_pred CCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEE-EEEEEEEE
Confidence 5433222212 13899999999999999999999998764 66777776
No 172
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.84 E-value=4.7e-20 Score=163.04 Aligned_cols=177 Identities=14% Similarity=0.159 Sum_probs=129.1
Q ss_pred EEEEecCCcEEEEEEe------CCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEE-eCC
Q psy3823 21 IYGALRNEQVLVSCTV------DANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR-NEQ 93 (365)
Q Consensus 21 ~~~v~~G~~~~l~C~~------~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~-~~~ 93 (365)
...+.+|+.+.|.|.+ .++|.+ .++|++++.. +..........++ .|.|.+++.+|+|.|+|.|. +..
T Consensus 112 ~~~~~~g~~v~l~C~~~~~~~~~g~p~~-~i~W~k~~~~-l~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~~n~~ 186 (315)
T 1itb_B 112 KQKLPVAGDGGLVCPYMEFFKNENNELP-KLQWYKDCKP-LLLDNIHFSGVKD---RLIVMNVAEKHRGNYTCHASYTYL 186 (315)
T ss_dssp EEEEETTSCEEEECSSCTTTCTTTTCCC-CCEEEETTEE-CCCCSSSEEEETT---EEEESSCCGGGCEEEEEEEEEEET
T ss_pred ceEEecCCCeEEEEecccccccCCCCCC-EEEEEECCEE-CCCccceEeecCc---eEEEEeceehhCcEEEEEEEcCCC
Confidence 4567899999999997 889999 9999999988 6543333333444 79999999999999999999 677
Q ss_pred CCCc---ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCce
Q psy3823 94 GNQR---TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGR 170 (365)
Q Consensus 94 ~~~~---~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~ 170 (365)
+... ..+.+.+..... ..+|.+...+. ....+.+|+.+.|.|.+.|.|.+. +.|+++|..+........
T Consensus 187 g~~~~~~~~~~~~~~~~~~----~~~P~~~~~~~---~~~~~~~g~~v~l~C~~~g~P~p~-i~W~~~g~~i~~~~~~~~ 258 (315)
T 1itb_B 187 GKQYPITRVIEFITLEENK----PTRPVIVSPAN---ETMEVDLGSQIQLICNVTGQLSDI-AYWKWNGSVIDEDDPVLG 258 (315)
T ss_dssp TEEEEEEEEEEEEEECCCC----CCCCEECSCCS---EEEECCSSSCEEEEEEEEECTTSE-EEEEETTEECCTTCSSEE
T ss_pred CcEEEEEEEEEEEEecCCC----CCCCEEecCCC---CcEEEeCCCcEEEEEEEecCCCCe-eEEEECCEECCccccccc
Confidence 7652 444454421111 24555432221 113578999999999999988886 999999998875432111
Q ss_pred --------------EEeeceEEEeeecCCC-CeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 171 --------------IITNQTLVLQSVTRHS-GGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 171 --------------~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
......|.|.++..+| +|.|+|.|.|..|... ..+.|.|.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~-~~~~l~v~ 313 (315)
T 1itb_B 259 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDA-AYIQLIYP 313 (315)
T ss_dssp EEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEE-EEEEEECC
T ss_pred ccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCcee-EEEEEEec
Confidence 1123489999999999 9999999999999765 55555553
No 173
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.83 E-value=1.4e-19 Score=150.58 Aligned_cols=177 Identities=11% Similarity=0.163 Sum_probs=120.0
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcc--eEEEEeCCCcCCCCCCcee----------------E-----ecCCeEEEEEEc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQ--YFTWAFNNSGTAPRPLTSY----------------S-----IQDGSTSVARYT 75 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~--~v~W~~~~~~~l~~~~~~~----------------~-----~~~~~~~~l~i~ 75 (365)
+..+.+.+|++++|.|.+.+.|.+. .++|+|++.. +....... . .......+|.|.
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAG-EGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSS-SCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCC-CCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 4567889999999999987777652 5899998865 43211000 0 001122369999
Q ss_pred cCCCCCCeEEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeE
Q psy3823 76 PTSELEYGTLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLI 154 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~ 154 (365)
+++.+|+|.|.|.+.+..+... ....+.+ ..++....... ....+.+|+.+.+.|.+.+.|++. |.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~---~~~~~~~~~~~~~~c~~~g~p~p~-i~ 151 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRV---------LVPPLPSLNPG---PALEEGQGLTLAASCTAEGSPAPS-VT 151 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEE---------EBCCCCEEEEC---SCEETTCCSEEEEEEEEEEBSCCE-EE
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEE---------eeeccceeeee---eeeeeeeccccceeeeccCCcCce-EE
Confidence 9999999999999987665444 3344444 22222222222 223566789999999999998887 99
Q ss_pred EEeCCeEEeeCCC---CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEE
Q psy3823 155 WTHNGITISNNAS---AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNI 210 (365)
Q Consensus 155 W~~~~~~l~~~~~---~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v 210 (365)
|++++..+..... .......+.|.|.++..+|+|.|+|.|.|+.|... ..+.+.+
T Consensus 152 W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~-~~~t~~v 209 (218)
T 4frw_A 152 WDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQD-QRITHIL 209 (218)
T ss_dssp EEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSC-EEEEEEC
T ss_pred EEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeE-EEEEEEE
Confidence 9999877653221 11222345799999999999999999999988654 3344443
No 174
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=2.2e-19 Score=145.93 Aligned_cols=166 Identities=15% Similarity=0.273 Sum_probs=118.5
Q ss_pred EEEEecCCcEEEEEEeCCCCCcc-eEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCccc
Q psy3823 21 IYGALRNEQVLVSCTVDANPQAQ-YFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRTP 99 (365)
Q Consensus 21 ~~~v~~G~~~~l~C~~~~~p~~~-~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~ 99 (365)
...+.+|+.++|.|.+.+.|.+. .+.|++++.. +...... .....|.|. +.+|+|.|+|.+.+ .....
T Consensus 7 ~~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~-l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n---~~~~~ 75 (184)
T 3b5h_A 7 TTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVV-LKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLP---EPMGT 75 (184)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCEEEEESSSEE-EECTTCC-----CSEEEEEEC--GGGCCEEEEEEEES---TTSCE
T ss_pred EEEEecCCCEEEEEECCCCCCCceEEEEEeCCEE-eeccccc-----CCcEEEEEe--chhhCeEEEEEEEC---CcCcE
Confidence 35578999999999965555442 8999999987 6543321 112356665 68899999999997 23367
Q ss_pred EEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe---CCeEEeeCC--CCceEEe-
Q psy3823 100 CTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH---NGITISNNA--SAGRIIT- 173 (365)
Q Consensus 100 ~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~---~~~~l~~~~--~~~~~~~- 173 (365)
+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.+.|++..+.|++ ++..+.... .......
T Consensus 76 ~~l~V---------~~~P~~~~~~----~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~ 142 (184)
T 3b5h_A 76 ANIQL---------HGPPRVKAVK----SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSS 142 (184)
T ss_dssp EEEEE---------CCSCCCEESC----SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEE
T ss_pred EEEEE---------ecCCceeecC----CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEec
Confidence 88888 6778766544 234578899999999999988434499999 555443211 1112222
Q ss_pred --eceEEEeeec-CCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 174 --NQTLVLQSVT-RHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 174 --~~~l~i~~~~-~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
...|.|.+++ ..|+|.|+|.|.|..|... ..+.|.|.
T Consensus 143 ~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~-~~~~l~V~ 182 (184)
T 3b5h_A 143 QGRSELHIENLNMEADPGQYRCNGTSSKGSDQ-AIITLRVR 182 (184)
T ss_dssp TTEEEEEECSCCTTTSSEEEEEEEEETTEEEE-EEEEEEEC
T ss_pred CCeeEEEEeeccccccCceEEEEEEeCCCcce-EEEEEEEe
Confidence 2489999999 9999999999999998755 45666664
No 175
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.83 E-value=2.8e-20 Score=165.60 Aligned_cols=188 Identities=22% Similarity=0.369 Sum_probs=140.3
Q ss_pred EEeecccCCeEee-CCceEEEEecC---CcEEEEEE-eCCCCCcceEEEEeCCCcCCCCCCceeEecCC---eEEEEEEc
Q psy3823 4 LIFNSTDEPVCKQ-SQQRIYGALRN---EQVLVSCT-VDANPQAQYFTWAFNNSGTAPRPLTSYSIQDG---STSVARYT 75 (365)
Q Consensus 4 ~~~~~~~~p~~~~-~~~~~~~v~~G---~~~~l~C~-~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~---~~~~l~i~ 75 (365)
+.+.+...|.... .....+.+.+| +.+.|.|. ..+.|.+ .++|++++.. ...... ....++ ..+.|.|.
T Consensus 123 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~-~i~W~~~~~~-~~~~~~-~~~~~~~~~~~~~L~i~ 199 (331)
T 3u83_A 123 LNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPS-VVSWETRLKG-EAEYQE-IRNPNGTVTVISRYRLV 199 (331)
T ss_dssp EEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCC-EEEEEESSCC-EEEEEE-EECTTSCEEEEEEEEEC
T ss_pred EEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCc-eEEEEcCCCC-ccccce-eECCCCcEEEEEEEEEE
Confidence 3455556665533 23455667888 88999998 8889999 9999997443 211110 111222 22468999
Q ss_pred cCCCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEE
Q psy3823 76 PTSELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIW 155 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W 155 (365)
++..+|.|.|+|.|.|..+.....+.|.| ..+|.+.+.+.. ...+.+|+.+.|.|.+.++|.+..+.|
T Consensus 200 ~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V---------~~~P~~~~~~~~---~~~~~~g~~~~l~C~~~g~p~p~~i~W 267 (331)
T 3u83_A 200 PSREAHQQSLACIVNYHMDRFKESLTLNV---------QYEPEVTIEGFD---GNWYLQRMDVKLTCKADANPPATEYHW 267 (331)
T ss_dssp CCGGGTTCEEEEEEEETTEEEEEEEECCE---------EEEEEEEEECCC---SCCBTTCCCEEEEEEEEEESCCCEEEE
T ss_pred eccccCCCEEEEEEecCCCcceeeEEEEE---------ecCCeEEEecCC---CceEeCCCeEEEEEeCcCCCCCCEEEE
Confidence 99999999999999999887778888888 567776655432 235788999999999999998877999
Q ss_pred EeCCeEEeeCCCCceEEeeceEEEe-eecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 156 THNGITISNNASAGRIITNQTLVLQ-SVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 156 ~~~~~~l~~~~~~~~~~~~~~l~i~-~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
++++..+.. .....+.+|.|. ++..+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 268 ~~~~~~~~~----~~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V~ 319 (331)
T 3u83_A 268 TTLNGSLPK----GVEAQNRTLFFKGPINYSLAGTYICEATNPIGTRS-GQVEVNIT 319 (331)
T ss_dssp EETTBSCCT----TEEEETTEEEECSCCCGGGCEEEEEEEEETTEEEE-EEEEECCB
T ss_pred EECCCcccc----cceecCcEEEEeCCCccccCeEEEEEEEeccccce-EEEEEEEe
Confidence 999887743 234456789999 9999999999999999998764 67777776
No 176
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.83 E-value=5.7e-20 Score=154.65 Aligned_cols=173 Identities=15% Similarity=0.224 Sum_probs=112.6
Q ss_pred cceecCCcEEEEEEEEecCCC--CeeEEEeCCeEE-----------eeCC----CCceEE-------eeceEEEeeecCC
Q psy3823 130 SVLNEGVDIYFDCHIQANPPY--KKLIWTHNGITI-----------SNNA----SAGRII-------TNQTLVLQSVTRH 185 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~--~~i~W~~~~~~l-----------~~~~----~~~~~~-------~~~~l~i~~~~~~ 185 (365)
..+.+|++++|.|.+.+.+.+ ..|.|++++... .... ..+... .+.+|.|.+++..
T Consensus 14 V~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 93 (226)
T 4f80_A 14 ILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTAS 93 (226)
T ss_dssp EEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGG
T ss_pred EEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchH
Confidence 457899999999999865543 358999865321 1100 011111 1457999999999
Q ss_pred CCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCCceeEEEeCCC
Q psy3823 186 SGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNNS 264 (365)
Q Consensus 186 d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~W~~~~~ 264 (365)
|+|.|+|.+.|..+... ..+.+.+. +....... ...+..|+.+.|.|.+.+ .|.|. +.|+++++
T Consensus 94 D~G~Y~C~a~n~~~~~~-~~v~~~~~------------~~~~~~~~-~~~~~~g~~v~l~c~~~g~~P~p~-i~W~k~~~ 158 (226)
T 4f80_A 94 DSGKYLCYFQDGDFYEK-ALVELKVA------------ALGSDLHV-DVKGYKDGGIHLECRSTGWYPQPQ-IQWSNNKG 158 (226)
T ss_dssp GCEEEEEEEEETTEEEE-EEEEEEEE------------BCCCCCEE-EEEEEETTEEEEEEEEEEEBSCCE-EEEECTTS
T ss_pred HCeeEEEEEECCCcEEE-EEEEEeec------------cceecccc-eeeeccCCceeeEEEeccCCCCCE-EEEEECCc
Confidence 99999999999776443 33333333 21111122 223778999999999988 58888 99998765
Q ss_pred CCCCCCCce-eEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 265 DTAPRPLTS-YSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 265 ~~~~~~~~~-~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
......... ....++....+.+..++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 159 ~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 159 ENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp CBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCC
T ss_pred eEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEEC
Confidence 333222222 22345555556666778899999999999999999888888764
No 177
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.83 E-value=1.9e-20 Score=162.32 Aligned_cols=259 Identities=15% Similarity=0.166 Sum_probs=108.5
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRT 98 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~ 98 (365)
+....|.+|+++.|.|.+. .+.+..+.|.-.-...... ..+.....|.+.+++.+ |.|+|.+.........
T Consensus 6 P~~~~V~~G~sv~l~Cs~~-c~~p~~~~~~t~l~~~~~~------~~g~~~~~~~l~~v~~~--~~y~C~~~~~~~~~~~ 76 (291)
T 1mq8_A 6 PSKVILPRGGSVLVTCSTS-CDQPKLLGIETPLPKKELL------LPGNNRKVYELSNVQED--SQPMCYSNCPDGQSTA 76 (291)
T ss_dssp CSEEEECTTCEEEEEEEEC-CSSCSEEEEECSSCCCCCC------CSCSSEEEEEEESCCSC--CCCEEEEECSSCEEEE
T ss_pred CCccEEcCCCeEEEEEeCC-CCCCccceEEecCCCcccc------cCCCceEEEEEEecccC--CeEEEEEEcCCccEEE
Confidence 3456789999999999975 4555258886421110110 01222235788888753 4699999754433347
Q ss_pred cEEEEEEeccccCCCCCCCe-EEEEcCCccCccceecCCcEEEEEEEEecCCCC--eeEEEeCCeEEeeCCCCceEEeec
Q psy3823 99 PCTFHVVKAGECEHPVDKPS-VQIKLGRNLNASVLNEGVDIYFDCHIQANPPYK--KLIWTHNGITISNNASAGRIITNQ 175 (365)
Q Consensus 99 ~~~l~V~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~--~i~W~~~~~~l~~~~~~~~~~~~~ 175 (365)
.+.|.| +.+|. +.+.+. ...+.+|+.++|.|.+.+.++.. .|+|++++..+...... ......
T Consensus 77 ~v~l~V---------~~~P~~v~I~~~----~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~-~~~~~~ 142 (291)
T 1mq8_A 77 KTFLTV---------YWTPERVELAPL----PSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV-GEPAEV 142 (291)
T ss_dssp ECEEEE---------CBCCSCCCBCCC----CSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC-BTTEEE
T ss_pred EEEEEE---------ecCCCCCEEecC----CccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC-CCCceE
Confidence 778888 55554 223221 13478999999999999755443 48999999888643211 111234
Q ss_pred eEEEeeecCCCCeEEEEEEEcCCCC-------CCcccEEEEEeeeeecccccCCCCceecC-ccceeeeecCceEEEEEE
Q psy3823 176 TLVLQSVTRHSGGLYACSAINSQGE-------GGSTPFDLNINKMVNLIFNSIDEPVCKQS-QQRIYGALRNEQVLVSCT 247 (365)
Q Consensus 176 ~l~i~~~~~~d~G~Y~C~~~~~~~~-------~~s~~~~l~v~~~~~~~~~~~~~p~~~~~-~~~~~~~~~g~~~~l~C~ 247 (365)
++.+.....++.+.|+|+|.+..+. ..+....|.|. ++|..... .... .+.+|+.++|.|.
T Consensus 143 ~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~----------~~P~~~~~~~~p~-~l~eG~~v~l~C~ 211 (291)
T 1mq8_A 143 TTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTF----------VLPATPPQLVSPR-VLEVDTQGTVVCS 211 (291)
T ss_dssp EEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC--------------------------------------
T ss_pred EEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEE----------ecCCCCceecCCc-CccCCCeEEEEEE
Confidence 6777777778888999999987542 23456677887 66533211 1111 3789999999999
Q ss_pred EeeeCCC-c-eeEEEeCCCCCCCCCCceeEeeCCCE--EEEEEcCCCc--ccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 248 VDANPQA-Q-YFTWAFNNSDTAPRPLTSYSIQDGST--SVARYTPTSE--LEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 248 ~~~~p~~-~-~~~W~~~~~~~~~~~~~~~~~~~~~~--s~l~i~~v~~--~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
+.|.|++ . .+.|+++|....... ..++.. +.+.+ .+.. ++.+.|+|.|.|.....+....|.|.
T Consensus 212 ~~g~~P~~~~~v~w~~~g~~l~~~~-----~~~g~~~~~~~~~-~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~ 281 (291)
T 1mq8_A 212 LDGLFPVSEAQVHLALGDQRLNPTV-----TYGNDSFSAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIY 281 (291)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred cCCCCCCcccEEEEEECCEecCcee-----eecCCeEEEEEec-ceeEcCCCCEEEEEEEEeCCcceEEEEEEEEE
Confidence 9997554 2 499999887543211 112221 11211 1223 33677889998865555566566654
No 178
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.83 E-value=1.6e-21 Score=172.08 Aligned_cols=172 Identities=18% Similarity=0.238 Sum_probs=126.6
Q ss_pred EEEecCCcEEEEEE-eCCCCCcceEEEEeCCCcCCCCCCceeEe-cCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc--
Q psy3823 22 YGALRNEQVLVSCT-VDANPQAQYFTWAFNNSGTAPRPLTSYSI-QDGSTSVARYTPTSELEYGTLLCWARNEQGNQR-- 97 (365)
Q Consensus 22 ~~v~~G~~~~l~C~-~~~~p~~~~v~W~~~~~~~l~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~-- 97 (365)
....+|+.+.|.|. ..+.|.+ .++|++++.. +......... .....+.|.|.++..+|.|.|+|.|.|..+...
T Consensus 124 ~~~~~~~~~~l~C~~~~g~P~~-~i~W~~~~~~-~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 201 (308)
T 4fom_A 124 LIDGGNETVAAICIAATGKPVA-HIDWEGDLGE-MESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIR 201 (308)
T ss_dssp CCTTCSCEEEEEEEEEEEBSCC-EEEECCCSSB-CCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEE
T ss_pred eEEcCCceEEEEEEecCCcCCc-eEEEEECCcc-cccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceE
Confidence 34457899999998 6788999 9999999987 5432211111 112345799999999999999999999887765
Q ss_pred ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceE
Q psy3823 98 TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTL 177 (365)
Q Consensus 98 ~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l 177 (365)
..+.|.| ..+|.+.+.+. ....+.+|+.++|.|.+.|+|+|..+.|++++..+.... ....+..|
T Consensus 202 ~~~~l~V---------~~~P~~~~~~~---~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~---~~~~~~~l 266 (308)
T 4fom_A 202 YSFILDI---------QYAPEVSVTGY---DGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGL---LASDNTLH 266 (308)
T ss_dssp EEEECCC---------CEEEEECCBCC---CSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSC---BCSTTEEE
T ss_pred EeEEEEE---------ecCCeeEEccc---ceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcE---EEcCCeEE
Confidence 4455555 55666544433 223566789999999999999886699999988775321 12223456
Q ss_pred EEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 178 VLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 178 ~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
.|.+++.+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 267 ~i~~v~~~d~G~Y~C~A~N~~G~~~-~~~~l~V~ 299 (308)
T 4fom_A 267 FVHPLTFNYSGVYICKVTNSLGQRS-DQKVIYIS 299 (308)
T ss_dssp CCSCCCSCCCSEEEEEEEETTEEEE-EEEECCEE
T ss_pred EECCCChhhCEEEEEEEEeCCCcEE-EEEEEEEE
Confidence 6788999999999999999999765 67788888
No 179
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.83 E-value=8.7e-20 Score=155.70 Aligned_cols=173 Identities=14% Similarity=0.196 Sum_probs=117.3
Q ss_pred cceecCCcEEEEEEEEe---cCCCCeeEEEeCCeEE-----ee-----------------------CCCCceEEe---ec
Q psy3823 130 SVLNEGVDIYFDCHIQA---NPPYKKLIWTHNGITI-----SN-----------------------NASAGRIIT---NQ 175 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~---~p~~~~i~W~~~~~~l-----~~-----------------------~~~~~~~~~---~~ 175 (365)
..+.+|+++.|.|.+.+ .+.+. +.|++++... .. ....+.... +.
T Consensus 12 v~v~~G~~v~L~C~~~~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 90 (250)
T 2fbo_J 12 VEVHAGGTVELPCSYQLANDTQPPV-ISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAP 90 (250)
T ss_dssp EEECTTSCEEECCEEEECSCCSCCE-EEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSC
T ss_pred eEEecCCeEEEEEEeEcCCCCCceE-EEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcc
Confidence 46789999999999987 66666 9999976432 00 001111111 24
Q ss_pred eEEEeeecCCCCeEEEEEEEcCCCCCC----cccEEEEEeeeeecccccCCC---CceecCccceeeeecCceEEEEEEE
Q psy3823 176 TLVLQSVTRHSGGLYACSAINSQGEGG----STPFDLNINKMVNLIFNSIDE---PVCKQSQQRIYGALRNEQVLVSCTV 248 (365)
Q Consensus 176 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~----s~~~~l~v~~~~~~~~~~~~~---p~~~~~~~~~~~~~~g~~~~l~C~~ 248 (365)
+|.|.+++.+|+|.|+|.+.+..+... +..+.|.|. .. |.+.........+.+|+.+.|.|.+
T Consensus 91 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~----------~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~ 160 (250)
T 2fbo_J 91 TLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVT----------GHTPSNNVHVSTAEVVQVDEGNDITMTCPC 160 (250)
T ss_dssp CEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEET----------TTSCCSCCEECCCSEEECCTTCCEEECCCE
T ss_pred eEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEe----------ccCCCCeEEEecCceEEecCCCcEEEEEEe
Confidence 899999999999999999998876542 236777777 33 3333333333447789999999999
Q ss_pred eeeCCCceeEEEeCCCCCCCCCCc---------------------eeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 249 DANPQAQYFTWAFNNSDTAPRPLT---------------------SYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 249 ~~~p~~~~~~W~~~~~~~~~~~~~---------------------~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
.+.|.|. +.|++++......... ...... ....|.|.+++.+|+|.|+|.|.|..|.
T Consensus 161 ~g~p~p~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 161 TDCANAN-VTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFS-GARNLVIRAAKITDAGRVWCELATGQGE 238 (250)
T ss_dssp ESCTTCE-EEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEE-TTTEEEECSCCGGGCEEEEEEEESSSSG
T ss_pred cCCCCCe-eEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccC-CccEEEEecCCcccCEEEEEEecCCccc
Confidence 9999997 9999987644321100 000000 1146999999999999999999996664
Q ss_pred ---ceecEEEE
Q psy3823 308 ---QRTPCTFH 315 (365)
Q Consensus 308 ---~~~~~~l~ 315 (365)
...++.|.
T Consensus 239 ~g~~~~~~~l~ 249 (250)
T 2fbo_J 239 LDADRSSTILK 249 (250)
T ss_dssp GGEEEEEEEEE
T ss_pred cCccceeEEEe
Confidence 44444443
No 180
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.83 E-value=6.1e-20 Score=148.28 Aligned_cols=150 Identities=9% Similarity=0.105 Sum_probs=109.4
Q ss_pred eEEEEecCCcEEEEEEeCC--CCCcceEEEEeCCCcCCC----------CCCceeEecCCeEEEEEEccCCCCCCeEEEE
Q psy3823 20 RIYGALRNEQVLVSCTVDA--NPQAQYFTWAFNNSGTAP----------RPLTSYSIQDGSTSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~--~p~~~~v~W~~~~~~~l~----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 87 (365)
..+.+.+|++++|.|.... .|.+ .+.|+|++.. +. ...+.....++ .|.|.+++.+|+|.|+|
T Consensus 4 ~~v~~~~G~~v~L~c~~~~~~~~~~-~i~W~k~~~~-i~~~~~~~~~~~~~~r~~~~~~g---sL~I~~v~~~D~G~Y~C 78 (176)
T 1hng_A 4 GTVWGALGHGINLNIPNFQMTDDID-EVRWERGSTL-VAEFKRKMKPFLKSGAFEILANG---DLKIKNLTRDDSGTYNV 78 (176)
T ss_dssp EEEEEETTSCEEECCTTCCCCTTEE-EEEEEETTEE-EEEEETTSCCEESSTTEEECTTS---CEEESSCCGGGCEEEEE
T ss_pred eEEEEEcCCcEEEcCCCCCcccccc-cEEEEeCCce-eEEEcCCCeecCCCCeEEECCCC---cEEEcccccccCEEEEE
Confidence 3567899999999995322 4566 9999999854 31 11121222344 59999999999999999
Q ss_pred EEEeCCCCC--cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeC
Q psy3823 88 WARNEQGNQ--RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNN 165 (365)
Q Consensus 88 ~a~~~~~~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~ 165 (365)
.+.+..+.. ...+.|.|... ...|.+. ..+..+.|.|.+.+.|++. +.|+++|..+...
T Consensus 79 ~~~n~~g~~~~~~~~~l~V~~~------~~~p~i~------------~~~~~v~L~C~~~g~p~p~-i~W~~~g~~l~~~ 139 (176)
T 1hng_A 79 TVYSTNGTRILNKALDLRILEM------VSKPMIY------------WECSNATLTCEVLEGTDVE-LKLYQGKEHLRSL 139 (176)
T ss_dssp EEEETTCCEEEEEEEEEEEECC------CCCCEEE------------EETTTTEEEEECSSCSSCE-EEEEETTEEEEEE
T ss_pred EEEeCCCCEEEEEEEEEEEeCC------CCCCEEE------------ecCCcEEEEEEecCCCCcE-EEEEECCEECCCC
Confidence 999988876 46778888311 1223322 2345689999999988876 9999999988643
Q ss_pred CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCC
Q psy3823 166 ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGG 202 (365)
Q Consensus 166 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 202 (365)
. .+.|..+..+|+|.|+|.|.|..|...
T Consensus 140 ~---------~~~i~~~~~~d~G~Y~C~a~N~~g~~~ 167 (176)
T 1hng_A 140 R---------QKTMSYQWTNLRAPFKCKAVNRVSQES 167 (176)
T ss_dssp S---------SSEEEEECSCCSSCEEEEEEETTEEEE
T ss_pred C---------cEEEEEEEccCCeEEEEEEEecCCCce
Confidence 2 245567889999999999999988544
No 181
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.83 E-value=9.5e-20 Score=151.04 Aligned_cols=174 Identities=14% Similarity=0.242 Sum_probs=121.1
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCCeEEee------------------CCCCceEEeeceEEEeeecCCCCeEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISN------------------NASAGRIITNQTLVLQSVTRHSGGLYA 191 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~------------------~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 191 (365)
..+.+|+++.|.|...+.+.+. +.|++++..... .........+.+|.|.+++..|+|.|+
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~-v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~ 87 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHNLPLALGA-FAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYT 87 (208)
T ss_dssp SEEETTCCEEEEEECCCSSCSE-EEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEE
T ss_pred ceeecCCcEEEEEeCCCCCceE-EEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEE
Confidence 3578999999999977766665 999987432110 011112223568999999999999999
Q ss_pred EEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCC
Q psy3823 192 CSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPL 271 (365)
Q Consensus 192 C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~ 271 (365)
|.+.+..+...+..+.|.|..+ ...|.+...... +..|+.+.|.|.+.+.| +. +.|+++|..... ..
T Consensus 88 C~~~~~~~~~~~~~~~l~V~~~-------~~~p~i~~~~~~---~~~g~~v~l~C~~~~~p-p~-i~W~~~g~~l~~-~~ 154 (208)
T 3r4d_A 88 LDMTDENYRRTQATVRFHVHQP-------VTQPFLQVTNTT---VKELDSVTLTCLSNDIG-AN-IQWLFNSQSLQL-TE 154 (208)
T ss_dssp EEEECSSCEEEEEEEEEEEECC-------CCCCEEEESCSS---CCTTCCEEEEEECSCTT-CE-EEEEETTEECCC-CS
T ss_pred EEEEcccCceeEEEEEEEeccC-------CCCCEEecCCce---EeeCCCEEEEEECCCCC-Cc-eEEEECCEeCCC-CC
Confidence 9999986544446677777711 122444433332 78899999999998865 66 999998864432 23
Q ss_pred ceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccc-eecEEEEEEcC
Q psy3823 272 TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQ-RTPCTFHVVKA 319 (365)
Q Consensus 272 ~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 319 (365)
......++ ..|.|.++..+|+|.|+|.|.|..|.. +.++.|.|..+
T Consensus 155 ~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~ 201 (208)
T 3r4d_A 155 RMTLSQNN--SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFD 201 (208)
T ss_dssp SEEEETTT--TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC--
T ss_pred CeEEcCCC--CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeC
Confidence 33333332 459999999999999999999999975 45666666544
No 182
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.82 E-value=2.4e-20 Score=155.34 Aligned_cols=174 Identities=14% Similarity=0.195 Sum_probs=119.1
Q ss_pred cceecCCcEEEEEEEEecCCCC--eeEEEeCCeEEeeC------CC----------CceE-------EeeceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYK--KLIWTHNGITISNN------AS----------AGRI-------ITNQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~--~i~W~~~~~~l~~~------~~----------~~~~-------~~~~~l~i~~~~~ 184 (365)
+.+.+|++++|.|.+.+.|.+. .|.|++++..+... .. .+.. ..+.+|.|.+++.
T Consensus 9 vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~ 88 (218)
T 4frw_A 9 VTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQ 88 (218)
T ss_dssp EEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCG
T ss_pred EEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccH
Confidence 4578999999999999876653 38899966432110 00 0011 1135799999999
Q ss_pred CCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCC
Q psy3823 185 HSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNS 264 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~ 264 (365)
+|+|.|.|.+.+..+........+.+. ..+...........+..|+.+.+.|.+.+.|+|. +.|++++.
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~-i~W~~~~~ 157 (218)
T 4frw_A 89 ADEGEYECRVSTFPAGSFQARLRLRVL----------VPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPS-VTWDTEVK 157 (218)
T ss_dssp GGCEEEEEEEEEETTEEEEEEEEEEEE----------BCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCE-EEEEESSC
T ss_pred HHCCceeEEEEeccCceeeeEEEEEEe----------eeccceeeeeeeeeeeeccccceeeeccCCcCce-EEEEECCc
Confidence 999999999988766544334444444 3332222222223367889999999999999998 99999876
Q ss_pred CCCCCCCceeEeeCC---CEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 265 DTAPRPLTSYSIQDG---STSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 265 ~~~~~~~~~~~~~~~---~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
.... ......++ ..+.|.|.++..+|+|.|+|.|.|..|.....+++.|.
T Consensus 158 ~~~~---~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 158 GTTS---SRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp CEEE---EEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred cccc---CceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 4321 11111222 24579999999999999999999999988776666553
No 183
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.82 E-value=6.8e-19 Score=146.50 Aligned_cols=165 Identities=16% Similarity=0.195 Sum_probs=117.4
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-CC------------CCCceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-AP------------RPLTSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
+....+.+|++++|.|.+.+.|.+ .+.|+|+.... +. ...+......+....|.|.+++.+|+|.|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQASQSISS-YLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATY 86 (213)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CCeEEEcCCCCEEEEEEecCCCCc-eEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEE
Confidence 455778999999999998888888 99999953210 10 01121222334455899999999999999
Q ss_pred EEEEEeCCCC---CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeCCeE
Q psy3823 86 LCWARNEQGN---QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHNGIT 161 (365)
Q Consensus 86 ~C~a~~~~~~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~~~~ 161 (365)
+|.+.+..+. ......|.|.. +..+|.+.+.+. ...+.+|+.++|.|.+.+ .|.+. +.|+++|..
T Consensus 87 ~C~~~~~~~~~~~~~~~~~l~V~~------~~~~p~v~~~~~----~~~~~~g~~v~l~C~~~g~~P~~~-v~W~k~g~~ 155 (213)
T 3nl4_L 87 YCQSTYENPTYVSFGGGTEVGVKG------DPVAPTVLIFPP----SADLVATGTVTIVCVANKYFPDVT-VTWEVDGTT 155 (213)
T ss_dssp EEEECCSSTTTCEECCCEEEEEEC------CCBCCEEEEECC----CHHHHTTSEEEEEEEEEEEBSCCE-EEEEETTEE
T ss_pred EEecCCCCceeEEeCCCeEEEEeC------CCcCCeEEEeCC----chhhccCCcEeEEEEEecccCCcE-EEEEeCCcc
Confidence 9999987763 22556677632 144676665442 234667999999999998 77555 999999988
Q ss_pred EeeCC---------CCceEEeeceEEEeeecCCCCeEEEEEEE
Q psy3823 162 ISNNA---------SAGRIITNQTLVLQSVTRHSGGLYACSAI 195 (365)
Q Consensus 162 l~~~~---------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 195 (365)
+.... ..+.....+.|.|..+..+|+|.|+|.|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 156 QTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp CCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 75311 11222334679999999999999999999
No 184
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=9.6e-21 Score=168.94 Aligned_cols=180 Identities=19% Similarity=0.281 Sum_probs=130.8
Q ss_pred eEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCce-eEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcc
Q psy3823 20 RIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTS-YSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRT 98 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~ 98 (365)
....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +...... ..........|.|.+++.+|+|.|+|.|.|..+....
T Consensus 131 ~~~~v~~g~~v~l~C~~~g~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 208 (334)
T 1ry7_B 131 KLLAVPAANTVRFRCPAAGNPTP-SISWLKNGRE-FRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQ 208 (334)
T ss_dssp CEEEEETTCCEEEECCCCCSSCC-EEECCBTTBC-CCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEE
T ss_pred eeEEecCCCcEEEEEEccCCCCC-eEEEEECCEE-CcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEE
Confidence 35678899999999998889999 9999999987 6543321 1111122237999999999999999999999887777
Q ss_pred cEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe----CCeEEeeCCCCce-EEe
Q psy3823 99 PCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH----NGITISNNASAGR-IIT 173 (365)
Q Consensus 99 ~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~----~~~~l~~~~~~~~-~~~ 173 (365)
.+.|.|.... ..+|.+..... ....+.+|+.+.|.|.+.+.|.+. +.|++ +|..+........ ...
T Consensus 209 ~~~l~V~~~~-----~~~p~~~~~~~---~~~~~~~G~~v~l~C~~~g~p~p~-v~W~~~~~~~g~~~~~~~~~~~~~~~ 279 (334)
T 1ry7_B 209 TYTLDVLERS-----PHRPILQAGLP---ANQTAVLGSDVEFHCKVYSDAQPH-IQWLKHVEVNGSKVGPDGTPYVTVLK 279 (334)
T ss_dssp EEEEEEECCC-----CSSCBCCTTCS---CCEEEESSCCEEECCCCBCSSCEE-EEEEECCCGGGCSBCTTSSBCCCCCC
T ss_pred EEEEEEecCC-----CCCCceEecCC---CceEEeCCCCEEEEEEEecCCCCe-EEEEECCcCCCccccCCCCeeEEEee
Confidence 8888884210 11232221111 234678999999999999988886 99999 6666643222110 111
Q ss_pred ----------eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 174 ----------NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 174 ----------~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
...|.|.+++..|+|.|+|.|.|..|... ..+.|.|.
T Consensus 280 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V~ 326 (334)
T 1ry7_B 280 TAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSH-HSAWLVVL 326 (334)
T ss_dssp CSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEE-EEEEEEEE
T ss_pred cCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEE-EEEEEEEE
Confidence 23799999999999999999999999766 57788887
No 185
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.82 E-value=1.2e-19 Score=150.00 Aligned_cols=173 Identities=13% Similarity=0.116 Sum_probs=118.1
Q ss_pred ceecCCcEEEEEEEEecCCCCeeEEEeCC-eEEeeCCCCceEE--eeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEE
Q psy3823 131 VLNEGVDIYFDCHIQANPPYKKLIWTHNG-ITISNNASAGRII--TNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFD 207 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~p~~~~i~W~~~~-~~l~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~ 207 (365)
.+.+|+.+.|.|.+.|.|.+. +.|+++. .++. ..... ....|.|.+++..|+|.|.|.+.|..+.. +..+.
T Consensus 12 ~~~~G~~v~L~C~~~g~P~p~-i~W~~~~~~~~~----~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~-~~~~~ 85 (202)
T 1vca_A 12 LAQIGDSVSLTCSTTGCESPF-FSWRTQIDSPLN----GKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKL-EKGIQ 85 (202)
T ss_dssp EEETTSCEEEEEEEESCSSCE-EEEEETTCCCCS----SEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEE-EEEEE
T ss_pred EEcCCCcEEEEEeecCCCCCe-EEEECCCCCCcc----ceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceE-eeEEE
Confidence 345999999999999988887 9999842 2111 11111 24579999999999999999999987654 36788
Q ss_pred EEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-c-eeEEEeCCCCCCCCCCceeE---eeCCCEE
Q psy3823 208 LNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-Q-YFTWAFNNSDTAPRPLTSYS---IQDGSTS 282 (365)
Q Consensus 208 l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~-~~~W~~~~~~~~~~~~~~~~---~~~~~~s 282 (365)
|.|. .+|........ ..+.+|+.++|.|.+.+.+++ . .+.|++++............ ......+
T Consensus 86 l~V~----------~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~ 154 (202)
T 1vca_A 86 VEIY----------SFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSL 154 (202)
T ss_dssp EEEE----------BCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEE
T ss_pred EEEE----------eCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEE
Confidence 8888 55543322222 338899999999999986543 2 48999987532111000000 0011234
Q ss_pred EEEEcCCCcccCeEEEEEEEcCCccc-------eecEEEEEEcCc
Q psy3823 283 VARYTPTSELEYGTLLCWARNEQGSQ-------RTPCTFHVVKAG 320 (365)
Q Consensus 283 ~l~i~~v~~~d~G~Y~C~a~n~~g~~-------~~~~~l~v~~~~ 320 (365)
.|.|..+..+|.|.|+|.|.|..|.. +.++.|.|..++
T Consensus 155 ~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P 199 (202)
T 1vca_A 155 EVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP 199 (202)
T ss_dssp EEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC
T ss_pred EEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCC
Confidence 57888888889999999999998863 456677776543
No 186
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.82 E-value=9.5e-21 Score=170.08 Aligned_cols=170 Identities=16% Similarity=0.187 Sum_probs=130.8
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCe-EEEEEEEeCCCCCc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYG-TLLCWARNEQGNQR 97 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~a~~~~~~~~ 97 (365)
+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +...... ........|.|.+++.+|+| .|+|.|.+..+...
T Consensus 165 ~~~~~v~~G~~v~L~C~~~g~p~p-~i~W~~~~~~-~~~~~~~--~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~ 240 (347)
T 2ifg_A 165 VPNASVDVGDDVLLRCQVEGRGLE-QAGWILTELE-QSATVMK--SGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAE 240 (347)
T ss_dssp CCSSCCBTTCCEEEEEEEECSSCC-CCCEEESCCC-SSEEECC--CCCSSEEEEEEESCCSTTTTCCEEECCEETTEECC
T ss_pred CCceEEeCCCcEEEEEEEecCCCC-EEEEEcCCce-eeccccc--ceecccceEEEeeCChHHCCCeEEEEEEcCCCCEE
Confidence 344567899999999998889999 9999999876 4321110 12334558999999999999 99999999988877
Q ss_pred ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceE------
Q psy3823 98 TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRI------ 171 (365)
Q Consensus 98 ~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~------ 171 (365)
..+.|.| ..+|.+ .. ..+.+|+.++|.|.+.|.|.|. +.|+++|..+.........
T Consensus 241 ~~~~l~V---------~~~P~i-~~-------~~~~~g~~v~l~C~~~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~~~ 302 (347)
T 2ifg_A 241 VSVQVNV---------SFPASV-QL-------HTAVEMHHWCIPFSVDGQPAPS-LRWLFNGSVLNETSFIFTEFLEPAA 302 (347)
T ss_dssp EEECCCC---------BEEEEE-EE-------CCCEESSSEEEEEEEEEESCCE-EEEEETTEECCCCSSEEEEECCCCT
T ss_pred EEEEEEE---------cCCCee-ee-------ccCccCceEEEEEEeeecCCCc-EEEEeCCEECCCCcceeeEEEeecC
Confidence 7777777 556664 11 1356899999999999998886 9999999988743221111
Q ss_pred ---EeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 172 ---ITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 172 ---~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
...++|.|.+++..|+|.|+|.|.|..|... ..+.|.|.
T Consensus 303 ~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V~ 344 (347)
T 2ifg_A 303 NETVRHGCLRLNQPTHVNNGNYTLLAANPFGQAS-ASIMAAFM 344 (347)
T ss_dssp TCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEE-EEEEECSC
T ss_pred CCcccceEEEECCCCcccCceEEEEEecCCCcee-eEEEEEec
Confidence 1256799999999999999999999998654 56666665
No 187
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.82 E-value=5.1e-19 Score=156.64 Aligned_cols=206 Identities=15% Similarity=0.165 Sum_probs=134.9
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+|.+...+. ..+.+|++++|.|.+.+. .+. +.|+++|..+... .........|.|.+++..|+|.|+|.
T Consensus 22 ~~~P~i~~~p~-----~~v~~G~~v~L~C~~~~~-~~~-~~W~k~g~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~ 92 (316)
T 3vh8_G 22 QDKPFLSAWPS-----AVVPRGGHVTLRCHYRHR-FNN-FMLYKEDRIHIPI--FHGRIFQESFNMSPVTTAHAGNYTCR 92 (316)
T ss_dssp --CCEEEEESC-----SEEETTSCEEEEEEBTTB-CCS-EEEEESSCSSSCH--HHHCCBSSCEEECSCCGGGCEEEEEE
T ss_pred CCCCEeeccCC-----CccCCCCCEEEEEEccCC-Cce-EEEEeCCCcccee--ecCCcceEEEEECCCCcccCeEEEEE
Confidence 56888877764 257899999999999887 445 9999998765321 01112357899999999999999999
Q ss_pred EEcCCC----CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCC
Q psy3823 194 AINSQG----EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPR 269 (365)
Q Consensus 194 ~~~~~~----~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~ 269 (365)
+.+..+ ...+..+.|.|.. ...+|.+...+.. . +.+|+.++|.|.+. .+++. +.|+++|......
T Consensus 93 a~~~~~~~~~~~~s~~~~l~V~~-------~~~~p~~~~~~~~-~-v~~G~~v~L~C~~~-~~~~~-~~w~k~g~~~~~~ 161 (316)
T 3vh8_G 93 GSHPHSPTGWSAPSNPVVIMVTG-------NHRKPSLLAHPGP-L-VKSGERVILQCWSD-IMFEH-FFLHKEGISKDPS 161 (316)
T ss_dssp EBCSSSSSSBCCCCCCEEEEEEC-------SSCCCEEEEESCS-E-EETTCCEEEEEEES-SCCSE-EEEEETTCCSCCE
T ss_pred EEcCCCCcceecCCCcEEEEEec-------CCCCCeEEecCCC-c-cCCCCeEEEEEcCC-CCCcE-EEEEECCCccccc
Confidence 986432 2334567777761 1124444433322 2 78999999999995 45555 9999988744221
Q ss_pred CCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccc-----eecEEEEEEcC--cc-c----cccCccccEEEEEEE
Q psy3823 270 PLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQ-----RTPCTFHVVKA--GE-C----EHPVAVSHRYVAKLY 337 (365)
Q Consensus 270 ~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~-----~~~~~l~v~~~--~~-c----~~~l~~~~~~~~~~~ 337 (365)
..............|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|... .+ - ...+.+|...++.|.
T Consensus 162 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~ 241 (316)
T 3vh8_G 162 RLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCS 241 (316)
T ss_dssp EEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEE
T ss_pred eeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEE
Confidence 111111122344579999999999999999999998852 45566666532 11 0 113455666666665
Q ss_pred EE
Q psy3823 338 AT 339 (365)
Q Consensus 338 ~~ 339 (365)
+.
T Consensus 242 ~~ 243 (316)
T 3vh8_G 242 SR 243 (316)
T ss_dssp ES
T ss_pred CC
Confidence 54
No 188
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.82 E-value=8.1e-19 Score=150.28 Aligned_cols=171 Identities=14% Similarity=0.225 Sum_probs=117.7
Q ss_pred ceEEEEecCCcEEEEEEeCCCC-----CcceEEEEeCCCc-CCC------------CCCceeEecCCeEEEEEEccCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP-----QAQYFTWAFNNSG-TAP------------RPLTSYSIQDGSTSVARYTPTSEL 80 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p-----~~~~v~W~~~~~~-~l~------------~~~~~~~~~~~~~~~l~i~~~~~~ 80 (365)
+..+.+.+|++++|.|.+.+.| .+ .+.|+|++.. .+. ...+......+....|.|.+++.+
T Consensus 45 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~-~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 123 (254)
T 2c1o_A 45 PLTLSVTIGQPASISCKSSQSLLYSNGKT-YLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAE 123 (254)
T ss_dssp CSEEEECTTSCEEEEEEESSCCBCSSSCB-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CceEEecCCCcEEEEeeccCcccccCCCC-ceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcc
Confidence 4567889999999999987777 36 9999985421 010 011212222344558999999999
Q ss_pred CCeEEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeC
Q psy3823 81 EYGTLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHN 158 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~ 158 (365)
|+|.|+|.|.+..+... ....|.|.. +..+|.+.+.+.. ....+|+.++|.|.+.+ .|++..+.|+++
T Consensus 124 D~G~Y~C~a~n~~~~~~~~~~~l~V~~------~~~~P~v~~~~~~----~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~ 193 (254)
T 2c1o_A 124 DLGIYYCVQGSHFPPTFGAGTKLELKR------ADAAPTVSIFPPS----SEQLTSGGASVVCFLNNFYPKDINVKWKID 193 (254)
T ss_dssp GCSEEEEEECSSSSCEEBCCEEEEECC------CCBCCEEEEECCC----HHHHHTTEEEEEEEEEEEBSSCCEEEEEES
T ss_pred cCEEEEEEEEcCcceEecCCEEEEECC------CCCCCeeEeecCC----hhhccCCcEEEEEEEecccCCCcEEEEEEC
Confidence 99999999998755322 345677621 1236776665432 22346889999999998 444455999999
Q ss_pred CeEEeeC---------CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 159 GITISNN---------ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 159 ~~~l~~~---------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
|..+... ...+.......|.|.++..+|+|.|+|.|.|....
T Consensus 194 g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 194 GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp SSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 9887643 01111223468999999999999999999998754
No 189
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.82 E-value=7.3e-19 Score=146.28 Aligned_cols=171 Identities=13% Similarity=0.201 Sum_probs=116.5
Q ss_pred ceEEEEecCCcEEEEEEeCCCC---CcceEEEEeCCCc-CC------------CCCCceeEecCCeEEEEEEccCCCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP---QAQYFTWAFNNSG-TA------------PRPLTSYSIQDGSTSVARYTPTSELEY 82 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p---~~~~v~W~~~~~~-~l------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 82 (365)
+....+.+|+.++|.|.+.+.| .+ .+.|+|++.. .+ ....+...........|.|.+++.+|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 85 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSN-YANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDE 85 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGG-CCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCeEeecCCCCEEEEEEecccccCCCC-eEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCC
Confidence 5567789999999999987777 46 8999997421 01 011121222233445899999999999
Q ss_pred eEEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC-CCeeEEEeCCe
Q psy3823 83 GTLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP-YKKLIWTHNGI 160 (365)
Q Consensus 83 G~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~~~i~W~~~~~ 160 (365)
|.|+|.+.+..+... ....|.|... +..+|.+.+.+.. ....+|+.++|.|.+.+.++ +..+.|+++|.
T Consensus 86 G~Y~C~~~~~~~~~~~~~~~l~V~~~-----~~~~P~v~~~~~~----~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 156 (212)
T 1q0x_L 86 AIYFCALWSNNKLVFGGGTKLTVLGQ-----PKSSPTVTLFPPS----SEELSTAKATLVCTITDFYPGVVTVDWKVDGT 156 (212)
T ss_dssp EEEEEEEECSSCEEECCCEEEEECCS-----CCBCCEEEEECCC----HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred EEEEEEEecCchhhcCCCeEEEEecC-----CCCCCeeEEeCCC----HHHccCCcEEEEEEEEEEeCCCeEEEEEECCE
Confidence 999999998765322 4456666210 1246776665432 23457899999999998544 33699999999
Q ss_pred EEeeCCC--------CceEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 161 TISNNAS--------AGRIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 161 ~l~~~~~--------~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
.+..... .+.......|.|.....+|+|.|+|.|.|...
T Consensus 157 ~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 203 (212)
T 1q0x_L 157 PVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGH 203 (212)
T ss_dssp EECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTE
T ss_pred eCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCc
Confidence 8853211 01112234688999999999999999998764
No 190
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.82 E-value=2.8e-20 Score=151.29 Aligned_cols=160 Identities=13% Similarity=0.164 Sum_probs=117.3
Q ss_pred eEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-CCCC------------CceeEec---CCeEEEEEEccCCCCCCe
Q psy3823 20 RIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-APRP------------LTSYSIQ---DGSTSVARYTPTSELEYG 83 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l~~~------------~~~~~~~---~~~~~~l~i~~~~~~d~G 83 (365)
..+.+.+|++++|.|...+.|.+ .+.|++++... +... ....... .....+|.|.+++.+|+|
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G 81 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSI-QFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSD 81 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCC-CEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCE
T ss_pred CcEEEeCCCCEEEEEEEcCCCce-EEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCE
Confidence 35678999999999998788888 99999998630 1100 0001110 111336999999999999
Q ss_pred EEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEe
Q psy3823 84 TLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITIS 163 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~ 163 (365)
.|+|.+.+.. ..+.|.| .. +.. + ....+.+|++++|.|.+.+.|.+. +.|++++..+
T Consensus 82 ~Y~C~~~~~~----~~~~l~V---------~~---~~~-~----~~~~v~~g~~~~l~C~~~~~p~~~-v~W~~~~~~~- 138 (184)
T 2ny1_B 82 TYICEVEDQK----EEVQLLV---------FG---LTA-N----SDTHLLQGQSLTLTLESPPGSSPS-VQCRSPRGKN- 138 (184)
T ss_dssp EEEEEETTEE----EEEEEEE---------EE---EEE-S----SCSEEETTCCEEEEEECCTTCCCE-EEEECTTSCE-
T ss_pred EEEEEEEcCC----CcEEEEE---------EE---ecC-C----CCceeecCCCEEEEEEcCCCCCCE-EEEEeCCCcc-
Confidence 9999998764 3566666 21 111 1 223678999999999999887776 9999987654
Q ss_pred eCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 164 NNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 164 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
......|.|.+++.+|+|.|+|.|.|..+... ..+.|.|.
T Consensus 139 -------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~-~~~~l~V~ 178 (184)
T 2ny1_B 139 -------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVE-FKIDIVVL 178 (184)
T ss_dssp -------EEESSEEEESSCCGGGCEEEEEEEEETTEEEE-EEEEEEEE
T ss_pred -------ccCceEEEEecCCcCCCeEEEEEEEECCceEE-EEEEEEEE
Confidence 23567899999999999999999998776554 56777777
No 191
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.82 E-value=1.6e-18 Score=144.65 Aligned_cols=171 Identities=18% Similarity=0.223 Sum_probs=115.6
Q ss_pred ceEEEEecCCcEEEEEE-eCCCC-CcceEEEEeCCCc-CCC----------C--CCceeEecCCeEEEEEEccCCCCCCe
Q psy3823 19 QRIYGALRNEQVLVSCT-VDANP-QAQYFTWAFNNSG-TAP----------R--PLTSYSIQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~-~~~~p-~~~~v~W~~~~~~-~l~----------~--~~~~~~~~~~~~~~l~i~~~~~~d~G 83 (365)
+....+.+|++++|.|. ..+.+ .+ .+.|+|++.. .+. . ..+...........|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 85 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNN-YVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEA 85 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGS-CCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCC-eEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCE
Confidence 45677899999999999 45443 45 9999996531 010 0 11112222334558999999999999
Q ss_pred EEEEEEEeCCCC--CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeCCe
Q psy3823 84 TLLCWARNEQGN--QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHNGI 160 (365)
Q Consensus 84 ~Y~C~a~~~~~~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~~~ 160 (365)
.|+|.+.+..+. ......|.|.. +..+|.+.+.+.. ....+|+.++|.|.+.+ .|++..+.|+++|.
T Consensus 86 ~Y~C~~~~~~~~~~~~~~~~l~V~~------~~~~P~v~~~~~~----~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~ 155 (216)
T 2xzc_L 86 DYYCGTWDSSLNPVFGGGTKLEIKR------TVAAPSVFIFPPS----DEQLKSGTASVVCLLNNFYPREAKVQWKVDNA 155 (216)
T ss_dssp EEEEEEECTTSCEEEBCCEEEEECC------CCBCCEEEEECCC----HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred EEEEEEEeCCCcceECCCEEEEEcC------CCCCCceEEeCCC----hhhccCCcEEEEEEEEeEcCCceEEEEEECCe
Confidence 999999987751 12455677721 1246776654432 12346889999999998 45544699999999
Q ss_pred EEeeC-C--------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 161 TISNN-A--------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 161 ~l~~~-~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.+... . ..+.......|.|..+..+|+|.|+|.|.|....
T Consensus 156 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 156 LQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp ECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred ecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 87543 0 0111122347899999999999999999998654
No 192
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.82 E-value=9.6e-20 Score=162.83 Aligned_cols=184 Identities=11% Similarity=0.120 Sum_probs=135.3
Q ss_pred CCeEEEEcCCccCccceecCCcEEEEEEEE-------ecCCCCeeEEEeCCeEE--eeCCCCceEEeeceEEEeeecCCC
Q psy3823 116 KPSVQIKLGRNLNASVLNEGVDIYFDCHIQ-------ANPPYKKLIWTHNGITI--SNNASAGRIITNQTLVLQSVTRHS 186 (365)
Q Consensus 116 ~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~-------~~p~~~~i~W~~~~~~l--~~~~~~~~~~~~~~l~i~~~~~~d 186 (365)
.|.+...+ ....+.+|+.+.|.|.+. +.|.+. +.|++++..+ ......+....+++|.|.+++..|
T Consensus 18 ~p~~~~~~----~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D 92 (339)
T 3o4o_C 18 CRFRGRHY----KREFRLEGEPVALRCPQVPYWLWASVSPRIN-LTWHKNDSARTVPGEEETRMWAQDGALWLLPALQED 92 (339)
T ss_dssp CEEEEECS----CCEEEETTBCCEEECTTSCSSCCSTTSSCCB-CCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTC
T ss_pred hHhhCcCc----eEEEEECCccEEEEeccccccccccCCCCce-EEEEECCCCcccCccccccEEeeCCeEEECCCCccc
Confidence 45554444 345788999999999997 777776 9999999874 332233455667899999999999
Q ss_pred CeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecC-ccceeeeecCceEEEEEE-----EeeeCCCceeEEE
Q psy3823 187 GGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQS-QQRIYGALRNEQVLVSCT-----VDANPQAQYFTWA 260 (365)
Q Consensus 187 ~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~-~~~~~~~~~g~~~~l~C~-----~~~~p~~~~~~W~ 260 (365)
+|.|+|.+.|..|... ..+.|.|. ..|..... ......+..|+.+.|.|. +.+.|.+. +.|+
T Consensus 93 ~G~Y~C~~~n~~g~~~-~~~~l~V~----------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~-v~W~ 160 (339)
T 3o4o_C 93 SGTYVCTTRNASYCDK-MSIELRVF----------ENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVK-IQWY 160 (339)
T ss_dssp CEEEECCEEETTEEEE-EEEEEEEE----------CSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCC-BCCE
T ss_pred CEEEEEEEECCcceEE-EEEEEEEE----------cCCCccccccccceEEECCCCEEEEecCCcccccCCCCce-EEEe
Confidence 9999999999877443 66778887 55443211 111123789999999999 78889998 9999
Q ss_pred eCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcc----ceecEEEEEEc
Q psy3823 261 FNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGS----QRTPCTFHVVK 318 (365)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~----~~~~~~l~v~~ 318 (365)
++|............... ...|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..
T Consensus 161 k~g~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~ 220 (339)
T 3o4o_C 161 KDSLLLDKDNEKFLSVRG--TTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKK 220 (339)
T ss_dssp ESSCBCCTTCSSEEECTT--SSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEEC
T ss_pred cCCeeCCCCCceeEEcCC--cceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEc
Confidence 998765443333332222 236999999999999999999999884 55677777763
No 193
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.81 E-value=1.8e-18 Score=144.01 Aligned_cols=171 Identities=15% Similarity=0.220 Sum_probs=118.0
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-C------------CCCCceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-A------------PRPLTSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
+..+.+.+|+.++|.|.+.+.|.+ .+.|+|..... . ....+...........|.|.+++.+|+|.|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (213)
T 3r06_A 8 PSSLPASLGDRVTINCQASQDISN-YLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSY 86 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEE
T ss_pred CCEEEecCCCcEEEEEEeCCCcCc-eEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEE
Confidence 456778999999999998888888 99999843210 0 001111122233445899999999999999
Q ss_pred EEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC-CCeeEEEeCCeEEe
Q psy3823 86 LCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP-YKKLIWTHNGITIS 163 (365)
Q Consensus 86 ~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~~~i~W~~~~~~l~ 163 (365)
+|.+.+..+... ....|.|.. +..+|.+.+.+.. .....|+.++|.|.+.+.++ +..+.|+++|..+.
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~------~~~~p~v~~~~~~----~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 156 (213)
T 3r06_A 87 YCQQYYNYPWTFGPGTKLEIKR------ADAKPTVSIFPPS----SEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKR 156 (213)
T ss_dssp EEEECSSSSCEECCCEEEEECC------CCBCCEEEEECCC----HHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred EEecccCCceEEcCCceEEEec------cCCCceeeeeCCC----ceecCCCCcEEEEEEeeecCCceEEEEEECCcccC
Confidence 999988654322 556677721 1356777665532 34557888999999998654 34599999999885
Q ss_pred eCC---------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 164 NNA---------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 164 ~~~---------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
... ..+.......|.|.....+|+|.|+|.+.|....
T Consensus 157 ~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 157 DGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp TTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred CceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 321 1112222356888888889999999999998653
No 194
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.81 E-value=4.5e-19 Score=148.48 Aligned_cols=175 Identities=12% Similarity=0.210 Sum_probs=116.2
Q ss_pred ceecCCcEEEEEEEEecCCC----CeeEEEeCCeEEeeCCC-------------CceEEe-------eceEEEeeecCCC
Q psy3823 131 VLNEGVDIYFDCHIQANPPY----KKLIWTHNGITISNNAS-------------AGRIIT-------NQTLVLQSVTRHS 186 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~p~~----~~i~W~~~~~~l~~~~~-------------~~~~~~-------~~~l~i~~~~~~d 186 (365)
.+.+|+++.|.|.+.+.|.+ ..+.|++++..+..... .+.... +.+|.|.+++.+|
T Consensus 12 ~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 91 (222)
T 3sbw_C 12 VVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQD 91 (222)
T ss_dssp EEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGG
T ss_pred EEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCccccc
Confidence 57789999999998766532 24999997654421100 111111 2489999999999
Q ss_pred CeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCC
Q psy3823 187 GGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDT 266 (365)
Q Consensus 187 ~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~ 266 (365)
+|.|+|.+.+ .+. ....+.|.|. .+|........ ..+..|+.+.|.|.+.|.|.|. +.|+++++..
T Consensus 92 ~G~Y~C~~~~-~~~-~~~~~~l~V~----------~~~~~~~~~~~-~~~~~g~~v~L~C~~~g~P~p~-i~W~~~~g~~ 157 (222)
T 3sbw_C 92 AGVYRCMISY-GGA-DYKRITVKVN----------APYNKINQRIL-VVDPVTSEHELTCQAEGYPKAE-VIWTSSDHQV 157 (222)
T ss_dssp CEEEEEEEES-SSE-EEEEEEEEEE----------BCCCCCEEEEE-EEETTTTEEEEEEEEEEBSCCE-EEEEETTCCE
T ss_pred CeEEEEEEEe-CCC-ceeEEEEEEE----------CCCCCCCceee-eeecCCCcEEEEEEecCCCCCe-EEEEECCCce
Confidence 9999999998 333 3356778887 44432221111 1267899999999999999998 9999984433
Q ss_pred CCCCCcee--EeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 267 APRPLTSY--SIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 267 ~~~~~~~~--~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
........ ...++......+..+..+|.|.|+|.|.|..|.....+.|.|...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~ 212 (222)
T 3sbw_C 158 LSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPEL 212 (222)
T ss_dssp ECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC
T ss_pred ecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCC
Confidence 22211111 122333333333345578999999999999999988888887643
No 195
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=4.7e-19 Score=150.49 Aligned_cols=170 Identities=15% Similarity=0.159 Sum_probs=120.5
Q ss_pred EEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCC--CcccE
Q psy3823 23 GALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGN--QRTPC 100 (365)
Q Consensus 23 ~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~--~~~~~ 100 (365)
.+.+|++++|.|.... +.. .+.|+|++.. +....... ........|.|.+++.+|+|.|+|.+.+..+. ....+
T Consensus 17 ~v~~G~~VtL~C~~~~-~~~-~~~w~k~g~~-~~~~~~~~-~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~ 92 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNY-GAV-EYQLHFEGSL-FAVDRPKP-PERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLL 92 (242)
T ss_dssp EEETTCCEEEEEECCT-TCC-EEEEEETTEE-EEEECCSS-CTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCE
T ss_pred ccCCCCcEEEEEeeCC-CCc-EEEEEECCCc-cccccccc-cCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcce
Confidence 6889999999999754 345 8999999876 43110000 11233458999999999999999999875443 23667
Q ss_pred EEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEe
Q psy3823 101 TFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQ 180 (365)
Q Consensus 101 ~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~ 180 (365)
.|.|... ..+|.+...+. ..+.+|++|+|.|.+.+.+ + .+.|+++|..+... ......+..|.|.
T Consensus 93 ~L~V~~~------~~~P~i~~~p~-----~~v~~G~~vtL~C~~~~~~-~-~~~w~k~g~~~~~~--~~~~~~~~~l~I~ 157 (242)
T 1p6f_A 93 DLVVTEM------YDTPTLSVHPG-----PEVISGEKVTFYCRLDTAT-S-MFLLLKEGRSSHVQ--RGYGKVQAEFPLG 157 (242)
T ss_dssp EEEEECC------SCCCEEEEESC-----SEEETTCEEEEEEECTTSC-S-EEEEEECSSSCEEE--EEECSSEEEEEEE
T ss_pred EEEeecc------cCCCceEccCC-----CccCCCCcEEEEEecCCCC-C-EEEEEECCCccCcc--ccCCCceEEEEeC
Confidence 8887321 23677665442 3578999999999987543 3 49999998766431 0111235789999
Q ss_pred eecCCCCeEEEEEEEcCC--CCCCcccEEEEEe
Q psy3823 181 SVTRHSGGLYACSAINSQ--GEGGSTPFDLNIN 211 (365)
Q Consensus 181 ~~~~~d~G~Y~C~~~~~~--~~~~s~~~~l~v~ 211 (365)
+++..|+|.|+|.+.|.. ....+..+.|.|.
T Consensus 158 ~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 190 (242)
T 1p6f_A 158 PVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 190 (242)
T ss_dssp ECCGGGCEEEEEEEEEETTEECCCCCCEEEEEE
T ss_pred CCccccCEEEEEEEECCCCcccCCCCCEEEEEe
Confidence 999999999999999864 3345577888887
No 196
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.81 E-value=7.7e-19 Score=144.97 Aligned_cols=171 Identities=16% Similarity=0.256 Sum_probs=114.4
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCc---eEEeeceEEEeeecCCCCeEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAG---RIITNQTLVLQSVTRHSGGLY 190 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~---~~~~~~~l~i~~~~~~d~G~Y 190 (365)
..+|.+...+. ..+.+|++++|.|.+.+ +.+. +.|+++|..+....... ....+..|.|.+++..|+|.|
T Consensus 6 ~~~P~i~~~p~-----~~v~~G~~v~L~C~~~~-~~~~-~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y 78 (201)
T 1nkr_A 6 HRKPSLLAHPG-----PLVKSEETVILQCWSDV-MFEH-FLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTY 78 (201)
T ss_dssp -CCCEEEEESC-----SEEETTCCEEEEEEESS-CCSE-EEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEE
T ss_pred CCCCeEEEEcC-----CccCCCCcEEEEEeccC-CCCE-EEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEE
Confidence 45777766542 36789999999999864 4444 99999887653211000 012357899999999999999
Q ss_pred EEEEEcCC----CCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCC
Q psy3823 191 ACSAINSQ----GEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDT 266 (365)
Q Consensus 191 ~C~~~~~~----~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~ 266 (365)
+|.+.+.. ....+..+.|.|.. ...+|.+...+.. .+.+|+.++|.|.+.+ +.+. +.|+++|...
T Consensus 79 ~C~a~~~~~~~~~~~~s~~~~l~V~~-------~~~~p~i~~~p~~--~v~~G~~v~L~C~~~~-~~~~-~~w~k~g~~~ 147 (201)
T 1nkr_A 79 RCYGSVTHSPYQVSAPSDPLDIVIIG-------LYEKPSLSAQPGP--TVLAGENVTLSCSSRS-SYDM-YHLSREGEAH 147 (201)
T ss_dssp EEEEEBTTBTTCCCCCCCCEEEEEEC-------SSCCCEEEEESCS--EECTTCEEEEEEEESS-CCSE-EEEEETTCSS
T ss_pred EEeEecCCCCccccCCCCCEEEEeec-------cCCCCceecCCCC--ccCCCCeEEEEEeCCC-CCce-EEEEECCccc
Confidence 99998653 22334667788771 1124555433322 3789999999999875 5566 9999998643
Q ss_pred CCCCCceeEeeCC-CEEEEEEcCCCcccCeEEEEEEEcCC
Q psy3823 267 APRPLTSYSIQDG-STSVARYTPTSELEYGTLLCWARNEQ 305 (365)
Q Consensus 267 ~~~~~~~~~~~~~-~~s~l~i~~v~~~d~G~Y~C~a~n~~ 305 (365)
.... .......+ ....|.|.+++ |+|.|+|.|.+..
T Consensus 148 ~~~~-~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 148 ERRL-PAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp CEEE-ECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred Cccc-ccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 2211 11111222 24569999998 9999999999753
No 197
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.81 E-value=1.5e-18 Score=146.79 Aligned_cols=171 Identities=15% Similarity=0.199 Sum_probs=118.4
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-C------------CCCCceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-A------------PRPLTSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
+..+.+.+|++++|.|...+.|.+ .+.|+|.+... . ....+..........+|.|.+++.+|+|.|
T Consensus 31 p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 109 (237)
T 3sob_L 31 PSSLSASVGDRVTITCRASQDVST-AVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATY 109 (237)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCc-eEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEE
Confidence 456788999999999998777888 99999954210 0 001111222233456899999999999999
Q ss_pred EEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC-CCeeEEEeCCeEEe
Q psy3823 86 LCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP-YKKLIWTHNGITIS 163 (365)
Q Consensus 86 ~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~~~i~W~~~~~~l~ 163 (365)
+|.+.+..+... ....|.|.. +..+|.+.+.+.. ....+|+.++|.|.+.+.++ ...+.|+++|..+.
T Consensus 110 ~C~~~~~~~~~~~~~~~l~V~~------~~~~p~v~~~~~~----~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~ 179 (237)
T 3sob_L 110 YCQQSYTTPPTFGQGTKVEIKR------TVAAPSVFIFPPS----DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS 179 (237)
T ss_dssp EEEECSSSSCEECCCEEEEEEC------CCBCCEEEEECCC----HHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred EEeeccCCceEEcCcEEEEEec------CCCCCceEEeCCC----hhhccCCceEEEEEEcccCCCceEEEEEECCCCCC
Confidence 999987665322 455666632 1446776665432 23456889999999998444 44599999998876
Q ss_pred eCC---------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 164 NNA---------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 164 ~~~---------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
... ..+.......|.|.....+|+|.|+|.|.|....
T Consensus 180 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 225 (237)
T 3sob_L 180 GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 225 (237)
T ss_dssp SSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred CceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCC
Confidence 321 1112223457889999999999999999998754
No 198
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.81 E-value=5.8e-19 Score=146.78 Aligned_cols=167 Identities=14% Similarity=0.182 Sum_probs=116.9
Q ss_pred EEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-CC------------CCCceeEecCCeEEEEEEccCCCCCCeEEEE
Q psy3823 21 IYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-AP------------RPLTSYSIQDGSTSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 21 ~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 87 (365)
...+.+|+.++|.|.+. |.+ .+.|+|+.... .. ...+...........|.|.+++.+|+|.|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 85 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNN-FVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYC 85 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSS-CEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCC-eEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEE
Confidence 67789999999999976 777 99999953110 10 1111121223345589999999999999999
Q ss_pred EEEeCCC--CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecC-CCCeeEEEeCCeEEee
Q psy3823 88 WARNEQG--NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANP-PYKKLIWTHNGITISN 164 (365)
Q Consensus 88 ~a~~~~~--~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~~~i~W~~~~~~l~~ 164 (365)
.+.+..+ .....+.|.|.. .+..+|.+.+.+.. ....+|+.++|.|.+.+.+ +...+.|+++|..+..
T Consensus 86 ~~~~~~~~~~~~~~~~l~V~~-----~~~~~P~v~~~~~~----~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 156 (211)
T 3tv3_L 86 GSLVGNWDVIFGGGTKLTVLG-----QPKAAPSVTLFPPS----SEELQANKATLVCLISDFYPGAVTVAWKADSSPVKA 156 (211)
T ss_dssp EEEETTTEEEECCCEEEEECC-----SCCBCCEEEEECCC----HHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred EEecCCCceeECCCceEEEeC-----CCCcCCeeEecCCc----hhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCC
Confidence 9999877 334667888821 11257777766532 2344799999999999853 3445999999998853
Q ss_pred CC--------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 165 NA--------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 165 ~~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
.. ..+.......|.|.++..+|+|.|+|.+.|..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~ 199 (211)
T 3tv3_L 157 GVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS 199 (211)
T ss_dssp TEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTE
T ss_pred CcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCC
Confidence 10 111122235688999888999999999999875
No 199
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=1.3e-18 Score=147.66 Aligned_cols=182 Identities=13% Similarity=0.166 Sum_probs=127.3
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCC-ceEEeeceEEEeeecCCCCeEEEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASA-GRIITNQTLVLQSVTRHSGGLYAC 192 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C 192 (365)
..+|.+...+.. .+.+|++|+|.|.+.+. +..+.|+++|..+...... .....+..|.|.+++..|+|.|+|
T Consensus 5 ~~kP~i~~~P~~-----~v~~G~~VtL~C~~~~~--~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 77 (242)
T 1p6f_A 5 LPKPFIWAEPHF-----MVPKEKQVTICCQGNYG--AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSC 77 (242)
T ss_dssp CCCCEEEEESCS-----EEETTCCEEEEEECCTT--CCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEE
T ss_pred CCCCEEEeeCCC-----ccCCCCcEEEEEeeCCC--CcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEE
Confidence 457887776632 68899999999997642 3449999999877531111 111235689999999999999999
Q ss_pred EEEcCCCC-CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCC
Q psy3823 193 SAINSQGE-GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPL 271 (365)
Q Consensus 193 ~~~~~~~~-~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~ 271 (365)
.+.+..+. ..+..+.|.|.. ...+|.+...+. . .+.+|+.++|.|.+.+. .+. +.|+++|.....
T Consensus 78 ~~~~~~~~s~~S~~~~L~V~~-------~~~~P~i~~~p~-~-~v~~G~~vtL~C~~~~~-~~~-~~w~k~g~~~~~--- 143 (242)
T 1p6f_A 78 IYRVGELWSEPSNLLDLVVTE-------MYDTPTLSVHPG-P-EVISGEKVTFYCRLDTA-TSM-FLLLKEGRSSHV--- 143 (242)
T ss_dssp EEEETTEECCCCCCEEEEEEC-------CSCCCEEEEESC-S-EEETTCEEEEEEECTTS-CSE-EEEEECSSSCEE---
T ss_pred EEecCCccccCCcceEEEeec-------ccCCCceEccCC-C-ccCCCCcEEEEEecCCC-CCE-EEEEECCCccCc---
Confidence 99876442 345677788761 012565553332 2 27899999999998754 455 999999864321
Q ss_pred ceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCC---ccceecEEEEEEc
Q psy3823 272 TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQ---GSQRTPCTFHVVK 318 (365)
Q Consensus 272 ~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~---g~~~~~~~l~v~~ 318 (365)
..........|.|.+++.+|+|.|+|.|.|.. ...+..+.|.|..
T Consensus 144 --~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 144 --QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp --EEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred --cccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEec
Confidence 11123445679999999999999999999864 2345677777764
No 200
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.81 E-value=1.2e-19 Score=147.55 Aligned_cols=157 Identities=10% Similarity=0.150 Sum_probs=116.7
Q ss_pred ceecCCcEEEEEEEEecCCCCeeEEEeCCeE--EeeCC----------CCceEEe-------eceEEEeeecCCCCeEEE
Q psy3823 131 VLNEGVDIYFDCHIQANPPYKKLIWTHNGIT--ISNNA----------SAGRIIT-------NQTLVLQSVTRHSGGLYA 191 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~--l~~~~----------~~~~~~~-------~~~l~i~~~~~~d~G~Y~ 191 (365)
.+.+|+++.|.|.+.+.|.+. +.|++++.. +.... ..+.... ..+|.|.+++.+|+|.|+
T Consensus 6 ~~~~G~~v~L~C~~~~~~~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 84 (184)
T 2ny1_B 6 LGKKGDTVELTCTASQKKSIQ-FHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 84 (184)
T ss_dssp EEETTSCEEECCBCSSSSCCC-EEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred EEeCCCCEEEEEEEcCCCceE-EEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEE
Confidence 578999999999998877777 999998763 21100 0111111 345999999999999999
Q ss_pred EEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCC
Q psy3823 192 CSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPL 271 (365)
Q Consensus 192 C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~ 271 (365)
|.+.+..+ .+.|.|. . +..+. . ..+..|+.++|.|.+.+.|.+. +.|++++...
T Consensus 85 C~~~~~~~-----~~~l~V~----------~---~~~~~-~-~~v~~g~~~~l~C~~~~~p~~~-v~W~~~~~~~----- 138 (184)
T 2ny1_B 85 CEVEDQKE-----EVQLLVF----------G---LTANS-D-THLLQGQSLTLTLESPPGSSPS-VQCRSPRGKN----- 138 (184)
T ss_dssp EEETTEEE-----EEEEEEE----------E---EEESS-C-SEEETTCCEEEEEECCTTCCCE-EEEECTTSCE-----
T ss_pred EEEEcCCC-----cEEEEEE----------E---ecCCC-C-ceeecCCCEEEEEEcCCCCCCE-EEEEeCCCcc-----
Confidence 99987643 4556665 2 11111 1 1278999999999999889887 9999987532
Q ss_pred ceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcCc
Q psy3823 272 TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 272 ~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 320 (365)
.. ....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|...+
T Consensus 139 ---~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 139 ---IQ---GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp ---EE---ESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred ---cc---CceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecC
Confidence 11 12359999999999999999999999999999999887553
No 201
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.81 E-value=1.8e-19 Score=151.81 Aligned_cols=164 Identities=16% Similarity=0.288 Sum_probs=114.5
Q ss_pred CceEEEEecCCcEEEEEEeCCCCC-cceEEEEeCCCcCCC---------CC----Ccee----------EecCCeEEEEE
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQ-AQYFTWAFNNSGTAP---------RP----LTSY----------SIQDGSTSVAR 73 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~-~~~v~W~~~~~~~l~---------~~----~~~~----------~~~~~~~~~l~ 73 (365)
.+....+.+|+.+.|.|.+.+.|. + .+.|++++.. .. .. .... ...++ .|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~---~L~ 80 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHY-MLEWFLTDRS-GARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG---RLV 80 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEE-EEEEEEECTT-CCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC---CEE
T ss_pred CCCcEEEEcCCCEEEecccCCCCCce-EEEEEEeCCC-ceeEEEEeccccCCccccccccccccccccccCCCc---eEE
Confidence 355677899999999999777775 6 9999987654 22 00 0001 11223 499
Q ss_pred EccCCCCCCeEEEEEEEeCC-CCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcE-EEEEEE-EecCCC
Q psy3823 74 YTPTSELEYGTLLCWARNEQ-GNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDI-YFDCHI-QANPPY 150 (365)
Q Consensus 74 i~~~~~~d~G~Y~C~a~~~~-~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v-~l~C~~-~~~p~~ 150 (365)
|.+++.+|+|.|+|.+.+.. +.....+.|.|... ...|.+...+ ....+.+|+.+ .|.|.+ .+.|.+
T Consensus 81 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~------p~~~~~~~~~----~~~~~~~g~~~~~l~C~~~~~~p~p 150 (231)
T 2pet_A 81 LAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAK------PEATEVSPNK----GTLSVMEDSAQEIATCNSRNGNPAP 150 (231)
T ss_dssp ESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBC------CCCCEEEECC----SSCCTTCCSEEEEEEEEEEEEBSCC
T ss_pred EcccCcccCceEEEEEEecCCCceEEEEEEEEEec------CCCcEEecCC----cceeecCCCceEEEEEEeECcccCC
Confidence 99999999999999999876 55557788888311 1124433322 22346688887 999999 788887
Q ss_pred CeeEEEeCCeEEeeCC---CCceEEe------------eceEEEeeecCCCCeEEEEEEEcC
Q psy3823 151 KKLIWTHNGITISNNA---SAGRIIT------------NQTLVLQSVTRHSGGLYACSAINS 197 (365)
Q Consensus 151 ~~i~W~~~~~~l~~~~---~~~~~~~------------~~~l~i~~~~~~d~G~Y~C~~~~~ 197 (365)
. +.|++++..+.... ....... .+.|.|.....+|+|.|+|.|.|.
T Consensus 151 ~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 151 K-ITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp E-EEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred E-EEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 6 99999999887544 1111111 156888766666799999999994
No 202
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.81 E-value=7.5e-20 Score=151.41 Aligned_cols=165 Identities=15% Similarity=0.226 Sum_probs=110.8
Q ss_pred EecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcccEEEE
Q psy3823 24 ALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRTPCTFH 103 (365)
Q Consensus 24 v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~~~l~ 103 (365)
+.+|+.++|.|.+ |.+ .++|+|++.. +... ......|.|.+++.+|+|.|+|.+.+.. ...+.|.
T Consensus 15 ~~~G~~v~L~C~~---p~~-~i~W~k~g~~-l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~---s~~~~v~ 79 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAK-NITWFKDGKM-IGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQNK---SKPLQVY 79 (204)
T ss_dssp CCSSSEEEEEECS---CSS-EEEEEETTEE-EEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSSC---CCCEEEE
T ss_pred ecCCCeEEEEEcC---CCC-EEEEEECCEE-CCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCCC---CeeEEEE
Confidence 4689999999987 777 9999999887 5321 1112379999999999999999965422 2345665
Q ss_pred EEeccccCC----------------------CCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeE
Q psy3823 104 VVKAGECEH----------------------PVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGIT 161 (365)
Q Consensus 104 V~~~~~~~~----------------------~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~ 161 (365)
+.....+.. ...+|.+ ... +.....+|++++|.|. +.|.+. +.|++++..
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----p~~v~~~G~~v~L~C~--g~p~p~-i~W~k~~~~ 151 (204)
T 1sy6_A 80 YRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGI-TQT----PYKVSISGTTVILTCP--QYPGSE-ILWQHNDKN 151 (204)
T ss_dssp EEC-------------------------------------CC----CCEEEEETTEEEEECS--CCCSSC-EEEEETTEE
T ss_pred EEEeccccccccccccccccccccccccccccccccce-ecC----CceeeecCCcEEEEcC--CCCCCc-eEEEECCEE
Confidence 530000000 0001111 111 1112238999999998 778777 999999998
Q ss_pred EeeCCC-CceEEeeceEEEeee-cCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 162 ISNNAS-AGRIITNQTLVLQSV-TRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 162 l~~~~~-~~~~~~~~~l~i~~~-~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
+..... ......+++|.|.++ +..|+|.|+|.|.|..|...+..+.|.+.
T Consensus 152 l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 152 IGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp ESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred CCCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 865322 233445789999999 99999999999999998654455666553
No 203
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.81 E-value=7.5e-19 Score=149.95 Aligned_cols=178 Identities=15% Similarity=0.199 Sum_probs=114.5
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcc----eEEEEeCCCcCCCCCC---------------ceeE---ecCCeEEEEEEc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQ----YFTWAFNNSGTAPRPL---------------TSYS---IQDGSTSVARYT 75 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~----~v~W~~~~~~~l~~~~---------------~~~~---~~~~~~~~l~i~ 75 (365)
.+....+.+|++++|.|.+.+.|.+. .+.|++++.. ..... .... .......+|.|.
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLT-FDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSS-CCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEES
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCC-CCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeC
Confidence 34556788999999999976666651 4999997654 22100 0000 001122359999
Q ss_pred cCCCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeE
Q psy3823 76 PTSELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLI 154 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~ 154 (365)
+++.+|+|.|+|.+.+..+.....+.|.| ..+|.+.+.+.. ....|+.+.|.|.+.+ +|.+..+.
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V---------~~~P~v~~~~~~-----~~~~~~~~~L~C~~~g~~P~pi~v~ 153 (248)
T 3pv7_A 88 GIQLEEAGEYRCEVVVTPLKAQGTVQLEV---------VASPASRLLLDQ-----VGMKENEDKYMCESSGFYPEAINIT 153 (248)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEE---------EBCCEEEEECC-------------CEEEEEEEEEBSSCCEEE
T ss_pred CCCHHHCeEEEEEEEeCCccceeEEEEEE---------ecCCceEEecCC-----ccccCCCcEEEEEEccEECCCeEEE
Confidence 99999999999999998776667888888 567887765432 3456788889999998 77773599
Q ss_pred EEeCCeEEee--------------CCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCC-CcccEEEEE
Q psy3823 155 WTHNGITISN--------------NASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEG-GSTPFDLNI 210 (365)
Q Consensus 155 W~~~~~~l~~--------------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~s~~~~l~v 210 (365)
|+++|..+.. ....+.......|.+.....+|.|.|+|.|.|..+.. .+..+.|.|
T Consensus 154 W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 154 WEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp EEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred EEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 9998853210 0111222234578888889999999999999988753 223344444
No 204
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.81 E-value=2.1e-18 Score=147.64 Aligned_cols=171 Identities=16% Similarity=0.223 Sum_probs=116.8
Q ss_pred ceEEEEecCCcEEEEEEeCCCC-----CcceEEEEeCCCcC-C------------CCCCceeEecCCeEEEEEEccCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP-----QAQYFTWAFNNSGT-A------------PRPLTSYSIQDGSTSVARYTPTSEL 80 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p-----~~~~v~W~~~~~~~-l------------~~~~~~~~~~~~~~~~l~i~~~~~~ 80 (365)
+..+.+.+|++++|.|.+.+.| .+ .+.|+|++... + ....+......+....|.|.+++.+
T Consensus 41 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 119 (252)
T 3bkj_L 41 PLSLPVNLGEQASISCRSSQSIVHSNGHT-YLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAE 119 (252)
T ss_dssp CSEEEECTTSCEEEEEEESSCCBCTTSCB-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CceEEEeCCCcEEEEEEcCCCccccCCCC-cEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcc
Confidence 4567789999999999987777 46 99999975310 1 0011112222334458999999999
Q ss_pred CCeEEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEEeC
Q psy3823 81 EYGTLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWTHN 158 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~ 158 (365)
|+|.|+|.+.+..+... ....|.|... ..+|.+.+.+.. ....+|+.++|.|.+.+. |++..+.|+++
T Consensus 120 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~------~~~P~v~~~~~~----~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~ 189 (252)
T 3bkj_L 120 DLGVYYCFQASLVPLTFGAGTKLELKRA------DAAPTVSIFPPS----SEQLTSGGASVVCFLNNFYPKDINVKWKID 189 (252)
T ss_dssp GCEEEEEEECSBSSCEECCCEEEEECCC------CBCCEEEEECCC----HHHHHHTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred cCEEEEEEEEcCCccEECCCEEEEEeCC------CcCcEEEEeCCC----hhhcCCCcEEEEEEEeeEeCCCcEEEEEEC
Confidence 99999999988655322 4456777211 236776664432 234478999999999984 44445999999
Q ss_pred CeEEeeC---------CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 159 GITISNN---------ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 159 ~~~l~~~---------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
|..+... ...+.......|.|.++..+|+|.|+|.|.|....
T Consensus 190 g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 190 GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp TEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 9987532 01111122356899999999999999999997653
No 205
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.80 E-value=8.6e-19 Score=146.39 Aligned_cols=169 Identities=12% Similarity=0.171 Sum_probs=114.5
Q ss_pred EEEEecCCcEEEEEEeCCC-CCcceEEEEeCCCcC-C--------------CCC--CceeEecCCeEEEEEEccCCCCCC
Q psy3823 21 IYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSGT-A--------------PRP--LTSYSIQDGSTSVARYTPTSELEY 82 (365)
Q Consensus 21 ~~~v~~G~~~~l~C~~~~~-p~~~~v~W~~~~~~~-l--------------~~~--~~~~~~~~~~~~~l~i~~~~~~d~ 82 (365)
.+.+.+|+.++|.|.+.+. |.+ .+.|+|..... . ... .+..........+|.|.+++.+|+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTY-TIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDE 87 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTC-CEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred cEEECCCCcEEEEEECCCCCCCc-EEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccC
Confidence 6788999999999998777 788 99999943110 0 000 011111133445799999999999
Q ss_pred eEEEEEEEeCCC-----CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEE
Q psy3823 83 GTLLCWARNEQG-----NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWT 156 (365)
Q Consensus 83 G~Y~C~a~~~~~-----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~ 156 (365)
|.|+|.+.+..+ .....+.|.|... +..+|.+.+.+.. .....|+.++|.|.+.+ .|.+..+.|+
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~-----~~~~P~~~~~~~~----~~~~~~~~v~L~C~~~g~~p~~~~v~W~ 158 (218)
T 3s96_B 88 AIYICGVGDTIKEQFVYVFGGGTKVTVLGQ-----PKSTPTLTVFPPS----SEELKENKATLVCLISNFSPSGVTVAWK 158 (218)
T ss_dssp EEEEEEEEEEETTEEEEEECCCEEEEEESC-----CCBCCEEEEECCC----HHHHHTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEEEEecCCCCceeEEEcCcEEEEEecC-----CCCCceEEeeCCC----cccccCCcEEEEEEECcccCCCeEEEEE
Confidence 999999998775 2235677888311 1256776665432 24556799999999998 5666469999
Q ss_pred eCCeEEeeCCCC-------ceEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 157 HNGITISNNASA-------GRIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 157 ~~~~~l~~~~~~-------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
++|..+...... +.......|.|.....+|+|.|+|.|.|..+
T Consensus 159 k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 208 (218)
T 3s96_B 159 ANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGD 208 (218)
T ss_dssp ETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTE
T ss_pred ECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCC
Confidence 999988642111 1111134577888888899999999999875
No 206
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.80 E-value=1.1e-18 Score=146.65 Aligned_cols=174 Identities=12% Similarity=0.081 Sum_probs=108.2
Q ss_pred eEEEEecCCcEEEEEEeCCCCCc--ceEEEEeCCCcCCC-----CC------------CceeEe---cCCeEEEEEEccC
Q psy3823 20 RIYGALRNEQVLVSCTVDANPQA--QYFTWAFNNSGTAP-----RP------------LTSYSI---QDGSTSVARYTPT 77 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p~~--~~v~W~~~~~~~l~-----~~------------~~~~~~---~~~~~~~l~i~~~ 77 (365)
..+.+.+|++++|.|.+.+.+.+ ..++|+|++.. .. .+ ...... ......+|.|.++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~-~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 90 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLR-QVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV 90 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTC-CEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCC-ceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence 34668899999999996554443 37999998753 11 00 000111 1123458999999
Q ss_pred CCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEE
Q psy3823 78 SELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWT 156 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~ 156 (365)
+.+|+|.|+|.|.|..+.....+.+.+. .++.... ....+.+|+.+.|.|.+.+. |.|. |.|+
T Consensus 91 ~~~D~G~Y~C~a~n~~~~~~~~v~~~~~---------~~~~~~~------~~~~~~~g~~v~l~c~~~g~~P~p~-i~W~ 154 (226)
T 4f80_A 91 TASDSGKYLCYFQDGDFYEKALVELKVA---------ALGSDLH------VDVKGYKDGGIHLECRSTGWYPQPQ-IQWS 154 (226)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEE---------BCCCCCE------EEEEEEETTEEEEEEEEEEEBSCCE-EEEE
T ss_pred chHHCeeEEEEEECCCcEEEEEEEEeec---------cceeccc------ceeeeccCCceeeEEEeccCCCCCE-EEEE
Confidence 9999999999999987766666666552 1111111 12356789999999999985 6666 9999
Q ss_pred eCCeEE-eeCCCCceEEeec---eEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 157 HNGITI-SNNASAGRIITNQ---TLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 157 ~~~~~l-~~~~~~~~~~~~~---~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
+++..+ ...........++ .+.+..++.+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 155 k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~-~~~~v~v~ 212 (226)
T 4f80_A 155 NNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLE-KTASISIA 212 (226)
T ss_dssp CTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEE-EEEEECCC
T ss_pred ECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeE-EEEEEEEC
Confidence 865433 3222211222222 234556788999999999999998655 45555554
No 207
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.80 E-value=2.1e-19 Score=149.52 Aligned_cols=172 Identities=16% Similarity=0.253 Sum_probs=116.9
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCc-CCC------------CCCceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSG-TAP------------RPLTSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~-~l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
+....+.+|+.++|.|.+.+.|.+ .+.|+|+... .+. ...+...........|.|.+++.+|+|.|
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 84 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKN-FAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAY 84 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGS-CCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCC-eEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEE
Confidence 566788999999999998888888 8999986421 010 01111222233455899999999999999
Q ss_pred EEEEEeCCCCC---cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEEeCCeE
Q psy3823 86 LCWARNEQGNQ---RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWTHNGIT 161 (365)
Q Consensus 86 ~C~a~~~~~~~---~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~~~~ 161 (365)
+|.+.+..... .....|.|... +..+|.+.+.+. .....+|+.++|.|.+.+. |+...+.|+++|..
T Consensus 85 ~C~~~n~~~~~~~~~~~~~l~V~~~-----~~~~p~v~~~~~----~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 155 (212)
T 1nfd_E 85 YCLSSYGDNNDLVFGSGTQLTVLRG-----PKSSPKVTVFPP----SPEELRTNKATLVCLVNDFYPGSATVTWKANGAT 155 (212)
T ss_dssp EEEEEETTTTEEEECCCEEEEEECC-----CCBCCEEECCCC----CHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEE
T ss_pred EEEEEcccCcccccCCceEEEEccC-----CCCCCEEEeeCC----chHhccCCceEEEEEEEeeECCccEEEEEECCeE
Confidence 99999732211 24455666211 124566554332 2235579999999999987 44245999999998
Q ss_pred EeeCCCCc-------eEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 162 ISNNASAG-------RIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 162 l~~~~~~~-------~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
+....... .....+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 156 INDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp ECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred cCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 86432110 0122456889999999999999999998764
No 208
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.79 E-value=6.5e-20 Score=148.11 Aligned_cols=156 Identities=13% Similarity=0.167 Sum_probs=109.2
Q ss_pred ceecCCcEEEEEE-EEecCCCCeeEEEeCCeEEee---------CCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 131 VLNEGVDIYFDCH-IQANPPYKKLIWTHNGITISN---------NASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 131 ~~~~g~~v~l~C~-~~~~p~~~~i~W~~~~~~l~~---------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
...+|++++|.|. .....+...|.|++++..+.. .........+++|.|.+++..|+|.|+|.+.|..|.
T Consensus 7 ~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g~ 86 (176)
T 1hng_A 7 WGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGT 86 (176)
T ss_dssp EEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTCC
T ss_pred EEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCCC
Confidence 4678999999994 322223334999999976631 111222234677999999999999999999999887
Q ss_pred C-CcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCC
Q psy3823 201 G-GSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDG 279 (365)
Q Consensus 201 ~-~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~ 279 (365)
. .+..+.|.|. .++. .+. + ...+..+.|.|.+.+.|+|. +.|+++|.... ...
T Consensus 87 ~~~~~~~~l~V~----------~~~~----~p~-i-~~~~~~v~L~C~~~g~p~p~-i~W~~~g~~l~---------~~~ 140 (176)
T 1hng_A 87 RILNKALDLRIL----------EMVS----KPM-I-YWECSNATLTCEVLEGTDVE-LKLYQGKEHLR---------SLR 140 (176)
T ss_dssp EEEEEEEEEEEE----------CCCC----CCE-E-EEETTTTEEEEECSSCSSCE-EEEEETTEEEE---------EES
T ss_pred EEEEEEEEEEEe----------CCCC----CCE-E-EecCCcEEEEEEecCCCCcE-EEEEECCEECC---------CCC
Confidence 5 3456777777 3321 011 1 22345699999999999998 99999875321 111
Q ss_pred CEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEE
Q psy3823 280 STSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFH 315 (365)
Q Consensus 280 ~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 315 (365)
. +.|..+..+|+|.|+|.|.|..|..+....|.
T Consensus 141 ~---~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 173 (176)
T 1hng_A 141 Q---KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVN 173 (176)
T ss_dssp S---SEEEEECSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred c---EEEEEEEccCCeEEEEEEEecCCCceeccccc
Confidence 1 34446778999999999999999887766554
No 209
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.79 E-value=5.4e-19 Score=147.12 Aligned_cols=170 Identities=16% Similarity=0.189 Sum_probs=113.6
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCC--eEE----------eeCCCCceEEe----eceEEEeeecCCCCeEEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNG--ITI----------SNNASAGRIIT----NQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~--~~l----------~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+.+|+++.|.|.+.+.|.+. +.|++++ ..+ ......+.... ..+|.|.+++.+|+|.|+|.
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3d9a_L 11 LSVTPGNSVSLSCRASQSIGNN-LHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQ 89 (213)
T ss_dssp EEECTTCCEEEEEEESSCCTTC-EEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEeCCCcEEEEEECCCCCCCC-EEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEe
Confidence 4678999999999999888776 9999742 221 00001122221 34899999999999999999
Q ss_pred EEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCCceeEEEeCCCCCCCC-CC
Q psy3823 194 AINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNNSDTAPR-PL 271 (365)
Q Consensus 194 ~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~W~~~~~~~~~~-~~ 271 (365)
+.+..+........|.|... ..+|.+........ ...|+.++|.|.+.+ .|++..+.|+++|...... ..
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~-------~~~p~v~~~~~~~~-~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 161 (213)
T 3d9a_L 90 QSNSWPYTFGGGTKLEIKRA-------DAAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN 161 (213)
T ss_dssp ECSSSSCEECCCEEEEECCC-------CBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEE
T ss_pred eecCCcceeCCCEEEEEecC-------CCCceeEeECCChh-hcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeee
Confidence 99887654434556777610 12565554222222 347899999999988 5555249999988643322 11
Q ss_pred ceeE--eeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 272 TSYS--IQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 272 ~~~~--~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
.... ..++. .+.|.|.++..+|+|.|+|.|.|.....
T Consensus 162 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 162 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred cCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 1111 11222 3579999999999999999999987665
No 210
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.79 E-value=4.6e-19 Score=148.49 Aligned_cols=178 Identities=19% Similarity=0.244 Sum_probs=119.5
Q ss_pred cceecCCcEEEEEEEEecCC----CCeeEEEeCCeEEe-----------eCCCCceEEe-------eceEEEeeecCCCC
Q psy3823 130 SVLNEGVDIYFDCHIQANPP----YKKLIWTHNGITIS-----------NNASAGRIIT-------NQTLVLQSVTRHSG 187 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~----~~~i~W~~~~~~l~-----------~~~~~~~~~~-------~~~l~i~~~~~~d~ 187 (365)
..+.+|++++|.|.+.+.+. ...+.|++++.... .....+.... +.+|.|.+++..|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~ 84 (222)
T 4i0k_A 5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDE 84 (222)
T ss_dssp CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGC
T ss_pred EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccC
Confidence 35789999999999887653 24499999764321 1111112211 56799999999999
Q ss_pred eEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEE-eeeCCCceeEEEeCCCCC
Q psy3823 188 GLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTV-DANPQAQYFTWAFNNSDT 266 (365)
Q Consensus 188 G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~~W~~~~~~~ 266 (365)
|.|+|.+.+.... +..+.|.|..+ ...|.+...... .+..|+.+.|.|.+ .+.|.+. +.|++++...
T Consensus 85 G~Y~C~~~~~~~~--~~~~~l~V~~~-------~~~p~i~~~~~~--~v~~G~~~~l~C~~~~g~P~~~-v~W~~~~~~~ 152 (222)
T 4i0k_A 85 GSYTCFVSIQDFD--SAAVSLQVAAP-------YSKPSMTLEPNK--DLRPGNMVTITCSSYQGYPEAE-VFWKDGQGVP 152 (222)
T ss_dssp SCEEEEEEECCCC--CCCCCCCCCBC-------CCCCEEECCC-------CCSEEEEEEEEEEEBSCCE-EEEECTTSCB
T ss_pred EEEEEEEEeCCCc--eEEEEEEEEcC-------CCCCcEEeCCCc--eecCCceEEEEEecccccCCCe-EEEEcCCCcc
Confidence 9999999986322 23445555510 123444433322 26789999999999 7889998 9999854422
Q ss_pred CCCCCcee--EeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 267 APRPLTSY--SIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 267 ~~~~~~~~--~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
........ ...++..+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 207 (222)
T 4i0k_A 153 LTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQ 207 (222)
T ss_dssp CCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC-
T ss_pred CCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCC
Confidence 22211111 134555677899999999999999999999999998888887654
No 211
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.79 E-value=1.8e-19 Score=146.97 Aligned_cols=156 Identities=15% Similarity=0.280 Sum_probs=105.9
Q ss_pred EecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEcc-CCCCCCeEEEEEEEeCCCCCcccEEE
Q psy3823 24 ALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTP-TSELEYGTLLCWARNEQGNQRTPCTF 102 (365)
Q Consensus 24 v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~a~~~~~~~~~~~~l 102 (365)
..+|+.+.|.|.+.+ | + .++|+|++.. +... .+. .|.|.+ ++.+|+|.|+|.|.|..+.....+.+
T Consensus 11 ~~~G~~v~L~C~~~~-~-~-~i~W~k~g~~-l~~~------~~~---~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~ 77 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-D-E-NLKWEKNGQE-LPQK------HDK---HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKA 77 (186)
T ss_dssp EEETTEEEEECSSCC-C-T-TCEEEETTEE-ECSC------CCS---EEEEESCCTTTSCEEEEEECSSCCCCCCEEECC
T ss_pred EeCCcEEEEEEeCCC-C-C-ceEEEECCEE-CCCC------CCC---EEEECCCCccccCEEEEEEEEeCCCcEEEEEEE
Confidence 368999999999765 3 4 5999999988 6542 122 799999 99999999999999988875444444
Q ss_pred EEEeccccC---------CCCCCCeEEEE--cCC-ccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCce
Q psy3823 103 HVVKAGECE---------HPVDKPSVQIK--LGR-NLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGR 170 (365)
Q Consensus 103 ~V~~~~~~~---------~~~~~p~~~~~--~~~-~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~ 170 (365)
.|....... ....+|.+... +.. ......+.+|+.+.|.|.+ |.+. +.|++||..+.....
T Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~-i~W~k~g~~i~~~~~--- 150 (186)
T 1jbj_A 78 RVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKT-IKWLKDGSIISPLNA--- 150 (186)
T ss_dssp CCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSC-EEEEETTEECCCSSC---
T ss_pred EEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCe-EEEEECCEECcccCC---
Confidence 442110000 00001110000 000 0000134489999999987 6666 999999999864221
Q ss_pred EEeeceEEEeeecCCCCeEEEEEEEcCCCCC
Q psy3823 171 IITNQTLVLQSVTRHSGGLYACSAINSQGEG 201 (365)
Q Consensus 171 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 201 (365)
....|.|.++..+|+|.|+|.|.|..|..
T Consensus 151 --~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 --TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp --CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred --CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 45789999999999999999999987743
No 212
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.79 E-value=1.8e-18 Score=144.87 Aligned_cols=177 Identities=13% Similarity=0.213 Sum_probs=112.4
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCc----ceEEEEeCCCcC--------CCCC------CceeEec---CCeEEEEEEccC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQA----QYFTWAFNNSGT--------APRP------LTSYSIQ---DGSTSVARYTPT 77 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~----~~v~W~~~~~~~--------l~~~------~~~~~~~---~~~~~~l~i~~~ 77 (365)
+..+.+.+|++++|.|...+.|.. ..+.|++++... .... ....... ......|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 455678999999999997655521 289999975210 1100 1111111 123458999999
Q ss_pred CCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe
Q psy3823 78 SELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH 157 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~ 157 (365)
+.+|+|.|+|.+.+ .+.....+.|.|... ...|..... ..+.+|+.+.|.|.+.|+|.+. +.|++
T Consensus 88 ~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~------~~~~~~~~~-------~~~~~g~~v~L~C~~~g~P~p~-i~W~~ 152 (222)
T 3sbw_C 88 KLQDAGVYRCMISY-GGADYKRITVKVNAP------YNKINQRIL-------VVDPVTSEHELTCQAEGYPKAE-VIWTS 152 (222)
T ss_dssp CGGGCEEEEEEEES-SSEEEEEEEEEEEBC------CCCCEEEEE-------EEETTTTEEEEEEEEEEBSCCE-EEEEE
T ss_pred ccccCeEEEEEEEe-CCCceeEEEEEEECC------CCCCCceee-------eeecCCCcEEEEEEecCCCCCe-EEEEE
Confidence 99999999999998 444456788888311 112222211 1456899999999999988876 99999
Q ss_pred C-CeEEeeCCCCc-eEEeeceE---EEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 158 N-GITISNNASAG-RIITNQTL---VLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 158 ~-~~~l~~~~~~~-~~~~~~~l---~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
+ +..+....... ....++.+ .+..+...|.|.|+|.|.|..|... ..+.|.|.
T Consensus 153 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~-~~~~l~v~ 210 (222)
T 3sbw_C 153 SDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEEN-HTAELVIP 210 (222)
T ss_dssp TTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEE-EEEEEECC
T ss_pred CCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCcccee-eEEEEEec
Confidence 8 65553211100 00112222 2224567899999999999998655 56667766
No 213
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.79 E-value=4.8e-19 Score=157.56 Aligned_cols=173 Identities=13% Similarity=0.138 Sum_probs=112.9
Q ss_pred EEEecCCcEEEEEEeCCCCCc-ceEEEEeCCCcCCCCCCceeEe--cCC---eEEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy3823 22 YGALRNEQVLVSCTVDANPQA-QYFTWAFNNSGTAPRPLTSYSI--QDG---STSVARYTPTSELEYGTLLCWARNEQGN 95 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~p~~-~~v~W~~~~~~~l~~~~~~~~~--~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~~ 95 (365)
..+.+|+.+.|.|.+.+.|.+ ..++|++++.. +......... .++ ..+.|.|.....+|.|.|+|.|.|..+.
T Consensus 127 ~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~-l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 127 ARATPQHTVSFTCESHGFSPRDITLKWFKNGNE-LSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp SCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEE-CCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred cccCCCCEEEEEEEEeCccCCCcEEEEEECCEE-ccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 456889999999997666654 38999999988 6544322111 111 2235888888888889999999998776
Q ss_pred Cc---ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCC-CeeEEEeCCeEEeeCCCCceE
Q psy3823 96 QR---TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPY-KKLIWTHNGITISNNASAGRI 171 (365)
Q Consensus 96 ~~---~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~~i~W~~~~~~l~~~~~~~~~ 171 (365)
.. ....+.+ ....+|.+.+.+. .+.+|+.++|.|.+.|.+++ ..+.|++||..+.........
T Consensus 206 ~~~~~~~~~~~~-------~v~~~P~i~~~~~------~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 272 (327)
T 2wng_A 206 GDPLRGTANLSE-------TIRVPPTLEVTQQ------PVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVT 272 (327)
T ss_dssp SCCEEEEEEGGG-------TBCBCCEEEEEEE------CCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCE
T ss_pred CCcccceEEecc-------ccCCCCEEEEecC------CcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceE
Confidence 32 2233321 0045777766542 26799999999999985444 369999999998643221111
Q ss_pred -------EeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEE
Q psy3823 172 -------ITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDL 208 (365)
Q Consensus 172 -------~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l 208 (365)
.....|.|..+..+|+|.|+|.|.|..+...++.+.+
T Consensus 273 ~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~~ 316 (327)
T 2wng_A 273 ENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDL 316 (327)
T ss_dssp ECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEEEEC
T ss_pred ECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhheEE
Confidence 1124588888899999999999999998776554433
No 214
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.79 E-value=6e-18 Score=145.11 Aligned_cols=178 Identities=14% Similarity=0.109 Sum_probs=120.8
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCC--cCCC-----------------CCCceeEe--cCCeEEEEEEc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNS--GTAP-----------------RPLTSYSI--QDGSTSVARYT 75 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~--~~l~-----------------~~~~~~~~--~~~~~~~l~i~ 75 (365)
+....+.+|++++|.|.+.+.| .+ .+.|+|++. . +. ...+.... .......|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~-~v~W~r~~~~~~-~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSY-WMHWVKQRPGRG-LEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLS 84 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGS-CEEEEEEETTTE-EEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred CCCeeecCCCcEEEEEEeccccCCCc-eEEEEEECCCCC-cEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEEC
Confidence 4456789999999999987765 56 999999532 1 10 01111111 12345689999
Q ss_pred cCCCCCCeEEEEEEEeCCCC---C--cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCC
Q psy3823 76 PTSELEYGTLLCWARNEQGN---Q--RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPY 150 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~~---~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~ 150 (365)
+++.+|+|.|+|.+.+..+. . ...+.|.| ..+|.+...+ ....+.+|++++|.|.+.+.+++
T Consensus 85 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V---------~~~~~v~~~p----~~~~v~~G~~v~L~C~~~~~~~~ 151 (256)
T 1nqb_A 85 SLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTV---------SSDIELTQTP----LSLPVSLGDQASISCRSSQSIVH 151 (256)
T ss_dssp SCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEE---------CCCCCEEEEC----SEEEECTTCCEEEEEEESSCCBC
T ss_pred cCChhhCEEEEEEEeeccCccceeEEcCceeeee---------cccccEEecC----cEEEEecCCcEEEEeEecCcccc
Confidence 99999999999999987653 1 14567888 4556554433 23467899999999999987765
Q ss_pred ----CeeEEEe--CCeEEee----------CCCCceEE----eeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEE
Q psy3823 151 ----KKLIWTH--NGITISN----------NASAGRII----TNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNI 210 (365)
Q Consensus 151 ----~~i~W~~--~~~~l~~----------~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v 210 (365)
..+.|++ +|..+.. ....+... ...+|.|.+++.+|+|.|+|.+.+...........|.|
T Consensus 152 ~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V 231 (256)
T 1nqb_A 152 SNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEI 231 (256)
T ss_dssp TTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred cccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEE
Confidence 2499999 5654421 00111211 13579999999999999999999865443334556777
Q ss_pred e
Q psy3823 211 N 211 (365)
Q Consensus 211 ~ 211 (365)
.
T Consensus 232 ~ 232 (256)
T 1nqb_A 232 K 232 (256)
T ss_dssp C
T ss_pred E
Confidence 6
No 215
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.79 E-value=1.2e-19 Score=147.86 Aligned_cols=154 Identities=17% Similarity=0.298 Sum_probs=105.0
Q ss_pred eecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEee-ecCCCCeEEEEEEEcCCCCCCcccEEEEE
Q psy3823 132 LNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQS-VTRHSGGLYACSAINSQGEGGSTPFDLNI 210 (365)
Q Consensus 132 ~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v 210 (365)
..+|+++.|.|.+.+ ++ . +.|+++|..+... .+.+|.|.+ ++.+|+|.|+|.|.|..|... ..+.+.|
T Consensus 11 ~~~G~~v~L~C~~~~-~~-~-i~W~k~g~~l~~~-------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~-~~~~~~v 79 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-DE-N-LKWEKNGQELPQK-------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTY-LYLKARV 79 (186)
T ss_dssp EEETTEEEEECSSCC-CT-T-CEEEETTEEECSC-------CCSEEEEESCCTTTSCEEEEEECSSCCCCCC-EEECCCC
T ss_pred EeCCcEEEEEEeCCC-CC-c-eEEEECCEECCCC-------CCCEEEECCCCccccCEEEEEEEEeCCCcEE-EEEEEEE
Confidence 468999999999876 43 4 9999999998753 235899999 999999999999999888632 3333333
Q ss_pred eeeeeccc--------ccCCCCceecC------ccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEe
Q psy3823 211 NKMVNLIF--------NSIDEPVCKQS------QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSI 276 (365)
Q Consensus 211 ~~~~~~~~--------~~~~~p~~~~~------~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~ 276 (365)
.....+.. ....+|.+... ......+..|+.+.|.|.+ |.|. +.|+++|......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~-i~W~k~g~~i~~~------- 148 (186)
T 1jbj_A 80 GSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKT-IKWLKDGSIISPL------- 148 (186)
T ss_dssp CSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSC-EEEEETTEECCCS-------
T ss_pred ecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCe-EEEEECCEECccc-------
Confidence 21000000 00001111000 0011124589999999998 7887 9999998754321
Q ss_pred eCCCEEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 277 QDGSTSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 277 ~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
......|.|.++..+|+|.|+|.|.|..|..
T Consensus 149 -~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 149 -NATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp -SCCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred -CCCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 1123358999999999999999999999876
No 216
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.79 E-value=5.8e-18 Score=144.31 Aligned_cols=186 Identities=10% Similarity=0.059 Sum_probs=117.2
Q ss_pred eEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-C-----------------CCCCceeEe--cCCeEEEEEEccC
Q psy3823 20 RIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-A-----------------PRPLTSYSI--QDGSTSVARYTPT 77 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l-----------------~~~~~~~~~--~~~~~~~l~i~~~ 77 (365)
....+.+|++++|.|.+.+.| .+ .+.|+|+.... + ....+.... ......+|.|.++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSY-AMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL 88 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEecCCcEEEEEEeccccCCCc-eEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC
Confidence 456789999999999977776 56 89999953210 0 001111111 1234568999999
Q ss_pred CCCCCeEEEEEEEeCCCC--CcccEEEEEEeccccC------CCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC
Q psy3823 78 SELEYGTLLCWARNEQGN--QRTPCTFHVVKAGECE------HPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP 149 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~--~~~~~~l~V~~~~~~~------~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~ 149 (365)
+.+|+|.|+|.+.+..+. ......|.|....... ....+|.+...+ ....+.+|++++|.|.+.+.+.
T Consensus 89 ~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~G~~v~L~C~~~~~~~ 164 (247)
T 2ghw_B 89 RAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSP----ATLSLSPGERATLSCRASQSVR 164 (247)
T ss_dssp CGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEEC----SEEEECTTSCEEEEEEESSCCT
T ss_pred CHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccC----CEEEecCCCcEEEEEEeCCCcc
Confidence 999999999999987222 1244677773210000 000123333322 2345789999999999999887
Q ss_pred CCeeEEEe--CCeEEee----------CCCCceEE----eeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 150 YKKLIWTH--NGITISN----------NASAGRII----TNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 150 ~~~i~W~~--~~~~l~~----------~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
+. +.|++ ++..+.. ....+... ...+|.|.+++.+|+|.|+|.+.+...........|.|.
T Consensus 165 ~~-v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 165 SN-LAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp TC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred ce-EEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 76 99999 5543311 00111211 134799999999999999999998654433344455554
No 217
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.79 E-value=3.4e-19 Score=159.86 Aligned_cols=180 Identities=13% Similarity=0.158 Sum_probs=99.6
Q ss_pred ceEEEEecCCcEEEEEEe-----CCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCC
Q psy3823 19 QRIYGALRNEQVLVSCTV-----DANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQ 93 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~-----~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~ 93 (365)
+....+.+|+.+.|.|.. .+.|.+ .++|++++.. +..... ...... .|.|.+++.+|+|.|+|.|.+..
T Consensus 127 ~~~~~~~~g~~~~l~C~~~~~~~~g~p~~-~v~W~k~~~~-l~~~~~-~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~~ 200 (349)
T 4dep_C 127 PVHKLYIEYGIQRITCPNVDGYFPSSVKP-TITWYMGCYK-IQNFNN-VIPEGM---NLSFLIALISNNGNYTCVVTYPE 200 (349)
T ss_dssp CEEEEETTCSEEEEECCSCTTSSCTTSCC-EEEEEETTEE-CCSCSS-EEEETT---EEEEESCCGGGCEEEEEEEEEEE
T ss_pred CcceeeecCccEEEEcCCCcccccCCCCc-eEEEeeCCEE-CCCccc-eeecCC---EEEEeeeeecCCcEEEEEEEEee
Confidence 345577899999999974 668888 9999999988 654322 222233 79999999999999999999976
Q ss_pred -CCC---cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe----cCCCCeeEEEeCCeEEeeC
Q psy3823 94 -GNQ---RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA----NPPYKKLIWTHNGITISNN 165 (365)
Q Consensus 94 -~~~---~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~----~p~~~~i~W~~~~~~l~~~ 165 (365)
+.. ...+.|.|...... ..+|.+...... ....+.+|+.++|.|.+.+ .|.+. +.|+++|..+...
T Consensus 201 ~g~~~~~~~~~~l~v~~~~~~---~~~p~i~~~~~~--~~~~v~~G~~v~l~C~~~~~~~g~p~p~-v~W~~~g~~l~~~ 274 (349)
T 4dep_C 201 NGRTFHLTRTLTVKVVGSPKN---AVPPVIHSPNDH--VVYEKEPGEELLIPCTVYFSFLMDSRNE-VWWTIDGKKPDDI 274 (349)
T ss_dssp TTEEEEEEEEEEEEEECCGGG---CCSCEEC------------------CCCEEEEECCCTTCCCE-EEEESSCC-----
T ss_pred CCEEEEEEEEEEEEEEccCCC---CCCCeEecCCCc--eeEEEecCCcEEEEEEEEEccCCCCCCE-EEEEECCEEcccc
Confidence 443 36677777321100 114544322211 1115778999999999994 46666 9999999887651
Q ss_pred C-CCc-----------eEEeeceEEEeeecCCCC-eEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 166 A-SAG-----------RIITNQTLVLQSVTRHSG-GLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 166 ~-~~~-----------~~~~~~~l~i~~~~~~d~-G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
. ... ......+|.|.++..+|+ |.|+|.|.|..|... ..+.|.|.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~-~~~~l~v~ 332 (349)
T 4dep_C 275 TIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVA-KAAKVKQK 332 (349)
T ss_dssp ---CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEE-EECC----
T ss_pred CCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEE-EEEEEeee
Confidence 1 111 112245699999999999 999999999998655 44556665
No 218
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.79 E-value=1.7e-18 Score=143.90 Aligned_cols=170 Identities=13% Similarity=0.182 Sum_probs=112.6
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeC--CeEE---e-------eCCCCceEEe----eceEEEeeecCCCCeEEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHN--GITI---S-------NNASAGRIIT----NQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~--~~~l---~-------~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+.+|++++|.|.+.+.|.+. +.|+++ |..+ . .....+.... ..+|.|.+++.+|+|.|.|.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~-v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (210)
T 1lk3_L 10 LTVSPGEKLTISCKASESVTSR-MHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQ 88 (210)
T ss_dssp EEECTTSCEEEEEEESSCCTTC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEcCCCCEEEEeeCCCccCCC-EEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEE
Confidence 4678999999999999887776 999983 2221 0 0001122211 34899999999999999999
Q ss_pred EEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCCCCCCCC-CC
Q psy3823 194 AINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSDTAPR-PL 271 (365)
Q Consensus 194 ~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~~~~~~-~~ 271 (365)
+.+..+........|.|... ..+|.+........ +..|+.++|.|.+.+. |++..+.|+++|...... ..
T Consensus 89 ~~~~~~~~~~~~~~l~V~~~-------~~~P~v~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 160 (210)
T 1lk3_L 89 QSWNGPLTFGAGTKLELKRA-------DAAPTVSIFPPSTE-QLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLD 160 (210)
T ss_dssp ECSSSSCEECCCEEEEECCC-------CBCCEEEEECCCHH-HHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEE
T ss_pred EEcCCCceeCCCEEEEEcCC-------CcCCeEEEECCchh-hccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceE
Confidence 99887644334456777610 02455543222212 3479999999999875 444249999998754322 11
Q ss_pred ceeE--eeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 272 TSYS--IQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 272 ~~~~--~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
.... ..++. .+.|.|.++..+|+|.|+|.|.|.....
T Consensus 161 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 161 SVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred ccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 1111 12222 3479999999999999999999987654
No 219
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.78 E-value=7.5e-18 Score=138.09 Aligned_cols=158 Identities=15% Similarity=0.216 Sum_probs=107.6
Q ss_pred CceEEEEecCCcEEEEEEeCC-CCCcceEEEEeCCCcCCC---CCC---------------ceeEecCCeEEEEEEccCC
Q psy3823 18 QQRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNNSGTAP---RPL---------------TSYSIQDGSTSVARYTPTS 78 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~-~p~~~~v~W~~~~~~~l~---~~~---------------~~~~~~~~~~~~l~i~~~~ 78 (365)
.+..+.+.+|++++|.|...+ .+.+ .+.|++++.. +. ... +.....+ .+|.|.+++
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~-~v~W~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~---~sL~I~~v~ 78 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVN-FITWLFNETS-LAFIVPHETKSPEIHVTNPKQGKRLNFTQS---YSLQLSNLK 78 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCC-EEEEEETTEE-EEEEECCSSSCCEEEECCHHHHTTEEECTT---CCEEECSCC
T ss_pred CCeEEEEEecCeEEEeccCCCccccc-EEEEEECCEE-EEEEecccCCCCceeecCccccccEEECCC---eEEEECCCC
Confidence 456778899999999999654 4456 9999998753 31 100 0011122 379999999
Q ss_pred CCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCC-cEEEEEEEEecCCCCeeEEEe
Q psy3823 79 ELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGV-DIYFDCHIQANPPYKKLIWTH 157 (365)
Q Consensus 79 ~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~-~v~l~C~~~~~p~~~~i~W~~ 157 (365)
.+|+|.|+|.+.+..+.....+.|.|... ...|.+.... .....|. .++|.|.+.+.+++..+.|++
T Consensus 79 ~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~------~~~p~i~~~~------~~~~~g~~~v~L~C~~~g~~p~p~i~W~~ 146 (193)
T 2if7_A 79 MEDTGSYRAQISTKTSAKLSSYTLRILRQ------LRNIQVTNHS------QLFQNMTCELHLTCSVEDADDNVSFRWEA 146 (193)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEECC------CEEEEEEECC------C---CSSEEEEEEEEEESCCTTCEEEEEE
T ss_pred cccCceEEEEEEecCCCeEEEEEEEEEcc------CCCCeEecCc------eeecCCCceEEEEEEEecCCCceEEEEEe
Confidence 99999999999988776556788888310 1123332211 1233465 899999999865444499999
Q ss_pred CCeEEeeCCCCceEEeeceEEEeeecCC-CCeEEEEEEEcCCCCC
Q psy3823 158 NGITISNNASAGRIITNQTLVLQSVTRH-SGGLYACSAINSQGEG 201 (365)
Q Consensus 158 ~~~~l~~~~~~~~~~~~~~l~i~~~~~~-d~G~Y~C~~~~~~~~~ 201 (365)
+|..+.. ...|.|.....+ |+|.|+|.|.|..|..
T Consensus 147 ~g~~l~~---------~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~ 182 (193)
T 2if7_A 147 LGNTLSS---------QPNLTVSWDPRISSEQDYTCIAENAVSNL 182 (193)
T ss_dssp TTEEEES---------SSEEEEEECTTTCSCCEEEEEEEETTEEE
T ss_pred CCEEcCC---------CCeEEEEeccCcCCCCcEEEEEECCCCcc
Confidence 9987642 235666655554 8999999999998854
No 220
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.78 E-value=3.5e-19 Score=150.46 Aligned_cols=171 Identities=15% Similarity=0.166 Sum_probs=96.2
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-C----------CC--CCceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-A----------PR--PLTSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l----------~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
+....+.+|++++|.|.+.+.|.+ .+.|+|++... + .. ..+......+....|.|.+++.+|+|.|
T Consensus 30 p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 108 (233)
T 3bqu_C 30 PASLSMSIGEKVTIRCITSTDIDD-DMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADY 108 (233)
T ss_dssp CSBC-------CCEEEEEEEEESS-CEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEE
T ss_pred CCeEEEecCCCEEEEEecCCcCCC-eEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEE
Confidence 445668899999999997777777 89999965320 1 00 0111111122344799999999999999
Q ss_pred EEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecC-CCCeeEEEeCCeEEe
Q psy3823 86 LCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANP-PYKKLIWTHNGITIS 163 (365)
Q Consensus 86 ~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p-~~~~i~W~~~~~~l~ 163 (365)
+|.+.+..+... ....|.|... ..+|.+.+.+.. ....+|+.++|.|.+.+.+ ++..+.|+++|..+.
T Consensus 109 ~C~~~~~~~~~~~~~~~l~V~~~------~~~p~v~~~~~~----~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~ 178 (233)
T 3bqu_C 109 YCLQSDNLPYTFGGGTNLEIKRA------DAAPTVSIFPPS----SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 178 (233)
T ss_dssp EEEECSSSSCCBCCCCBC---CC------CBCCEEEEECCC----HHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----
T ss_pred EEEEecCCceeecCCEEEEEeCC------CCCCEEEEeCCC----HHhhcCCceEEEEEEccccCCceEEEEEECCeeCC
Confidence 999987665332 3345565210 236776665432 2344799999999999854 443599999998775
Q ss_pred eC---------CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 164 NN---------ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 164 ~~---------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.. ...+.......|.|.....+|+|.|+|.|.|....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 179 NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred CCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 42 01111223457889999999999999999987543
No 221
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.78 E-value=2e-17 Score=142.46 Aligned_cols=157 Identities=17% Similarity=0.196 Sum_probs=113.7
Q ss_pred ceecCCcEEEEEEEEe-cCCC-CeeEEEeCCeEEeeCCCCceEEeeceEEEeee---cCCCCeE--EEEEEEcCCCCCCc
Q psy3823 131 VLNEGVDIYFDCHIQA-NPPY-KKLIWTHNGITISNNASAGRIITNQTLVLQSV---TRHSGGL--YACSAINSQGEGGS 203 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~-~p~~-~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~---~~~d~G~--Y~C~~~~~~~~~~s 203 (365)
.+.+|+.++|.|.+.+ .|.+ ..+.|+++|..+.. ........+.+... +..|+|. |+|.+.|..+...
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~- 88 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQE- 88 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEE-
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcE-
Confidence 6789999999999998 6654 24999999988753 23333456666655 7788875 9999999887644
Q ss_pred ccEEEEEeeeeecccccCC--CCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCE
Q psy3823 204 TPFDLNINKMVNLIFNSID--EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGST 281 (365)
Q Consensus 204 ~~~~l~v~~~~~~~~~~~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 281 (365)
..+.|.|. . +|.+.... ..+.+|+.+.|.|.+. |.+. +.| +|.... ..+..
T Consensus 89 ~~~~l~V~----------~~p~p~~~~~~---~~v~~G~~v~l~C~~~--p~~~-i~W--~g~~~~---------~~~~~ 141 (265)
T 2oz4_A 89 TLQTVTIY----------SFPAPNVILTK---PEVSEGTEVTVKCEAH--PRAK-VTL--NGVPAQ---------PLGPR 141 (265)
T ss_dssp EEEEEEEE----------CCCCCEEEESC---SEEETTCEEEEEEECC--TTSE-EEE--SSCSSS---------CCSSE
T ss_pred EEEEEEEe----------CCCCceeecCC---ceecCCCcEEEEEEcc--CCCE-EEE--CCEEcc---------CCCCc
Confidence 66788887 4 33333222 2277899999999998 8887 999 665431 12344
Q ss_pred EEEEEcCCCcccCeEEEEEEEcCC-ccce---ecEEEEEEcC
Q psy3823 282 SVARYTPTSELEYGTLLCWARNEQ-GSQR---TPCTFHVVKA 319 (365)
Q Consensus 282 s~l~i~~v~~~d~G~Y~C~a~n~~-g~~~---~~~~l~v~~~ 319 (365)
+.|.|..+..+|+|.|+|.|.|.. |... ..+.|.|..+
T Consensus 142 ~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~ 183 (265)
T 2oz4_A 142 AQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYG 183 (265)
T ss_dssp ECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEE
T ss_pred EEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeC
Confidence 568899999999999999998544 7654 6667776533
No 222
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.78 E-value=1.1e-18 Score=146.16 Aligned_cols=175 Identities=15% Similarity=0.314 Sum_probs=114.5
Q ss_pred EEEEecCCcEEEEEEeCCCCC-----cceEEEEeCCCcCCC-------------CCCceeEec---CCeEEEEEEccCCC
Q psy3823 21 IYGALRNEQVLVSCTVDANPQ-----AQYFTWAFNNSGTAP-------------RPLTSYSIQ---DGSTSVARYTPTSE 79 (365)
Q Consensus 21 ~~~v~~G~~~~l~C~~~~~p~-----~~~v~W~~~~~~~l~-------------~~~~~~~~~---~~~~~~l~i~~~~~ 79 (365)
.+.+.+|++++|.|...+.|. + .+.|++++.. .. ......... .....+|.|.+++.
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~-~v~W~~~~~~-~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~ 81 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQL-NLIWQLTDTK-QLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRV 81 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTE-EEEEEETTTC-CEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCce-EEEEEECCCc-cEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccc
Confidence 355789999999999766653 5 9999998755 31 001111111 01134799999999
Q ss_pred CCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEE-EecCCCCeeEEEe-
Q psy3823 80 LEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI-QANPPYKKLIWTH- 157 (365)
Q Consensus 80 ~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~-~~~p~~~~i~W~~- 157 (365)
+|+|.|+|.+.+.. .....+.|.|.. +..+|.+...+ ...+.+|+.+.|.|.+ .+.|.+. +.|++
T Consensus 82 ~D~G~Y~C~~~~~~-~~~~~~~l~V~~------~~~~p~i~~~~-----~~~v~~G~~~~l~C~~~~g~P~~~-v~W~~~ 148 (222)
T 4i0k_A 82 TDEGSYTCFVSIQD-FDSAAVSLQVAA------PYSKPSMTLEP-----NKDLRPGNMVTITCSSYQGYPEAE-VFWKDG 148 (222)
T ss_dssp GGCSCEEEEEEECC-CCCCCCCCCCCB------CCCCCEEECCC----------CCSEEEEEEEEEEEBSCCE-EEEECT
T ss_pred ccCEEEEEEEEeCC-CceEEEEEEEEc------CCCCCcEEeCC-----CceecCCceEEEEEecccccCCCe-EEEEcC
Confidence 99999999999853 344566666621 12235544322 2356789999999999 6778776 99998
Q ss_pred CCeEEeeCCCCceEE-ee---ceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 158 NGITISNNASAGRII-TN---QTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 158 ~~~~l~~~~~~~~~~-~~---~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
++..+.......... .+ ..|.|.++...|+|.|+|.+.|..|... ..+.|.|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~ 205 (222)
T 4i0k_A 149 QGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQD-AHGSVTIT 205 (222)
T ss_dssp TSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEE-EEEEEECC
T ss_pred CCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCc-eEEEEEEe
Confidence 454443211100111 11 2378999999999999999999998665 66777777
No 223
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.78 E-value=3.1e-17 Score=161.52 Aligned_cols=242 Identities=11% Similarity=0.060 Sum_probs=154.7
Q ss_pred cCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCC-CCeEEEEEEEeCCCCCc-ccEEEE
Q psy3823 26 RNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSEL-EYGTLLCWARNEQGNQR-TPCTFH 103 (365)
Q Consensus 26 ~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~-d~G~Y~C~a~~~~~~~~-~~~~l~ 103 (365)
.++.+.|.|.+.+.|.+ .+.|.+++.. +... ....+.|..+... ..+.|+|.+.+..|... ..+.+.
T Consensus 90 ~~g~l~v~c~~~g~P~p-~i~W~k~g~~-~~~~---------~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~ 158 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLG-NPIWNISGDP-TRTW---------NRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVL 158 (731)
T ss_dssp CSEEEEEEEEETTCCCC-SEEEEECCCC-CSSC---------EEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEE
T ss_pred CcceEEEEEecCCCCcc-ceeEEEeCCc-CCce---------eEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEee
Confidence 35689999999999999 9999999987 4321 1123445443222 34778887666665433 223322
Q ss_pred EEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeE-EE--eCCeEEeeCCCCc--eEEeeceEE
Q psy3823 104 VVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLI-WT--HNGITISNNASAG--RIITNQTLV 178 (365)
Q Consensus 104 V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~-W~--~~~~~l~~~~~~~--~~~~~~~l~ 178 (365)
+ ..| ..+|.+. .+ .+..+.+|+++.|.|.+.|.|.+. +. |+ ++|..+....... .....++|.
T Consensus 159 ~---~~~---~~~p~~~-~~----~~~~v~~G~~v~l~C~~~g~P~p~-i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~ 226 (731)
T 2v5y_A 159 G---HPC---TRTPHFL-RI----QNVEVNAGQFATFQCSAIGRTVAG-DRLWLQGIDVRDAPLKEIKVTSSRRFIASFN 226 (731)
T ss_dssp S---SCC---SSSCEEC-CC----CCEEEETTSCEEEEEEEESCCCTT-CEEEEEESSSCCEEEEEEEECCSSEEEEEEE
T ss_pred e---ccc---ccccccc-cc----cceEEeCCCcEEEEEEeCCCCCCc-eeEEEecCCCccccccceEEeccccceEEEE
Confidence 2 011 2345543 22 345788999999999999999887 87 88 6787765321100 001246899
Q ss_pred EeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee---CCCc
Q psy3823 179 LQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN---PQAQ 255 (365)
Q Consensus 179 i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~---p~~~ 255 (365)
|.++...|+|.|+|.|.|..|...+..+.|.|. .+|.....+.. . ......+.|.|..... .+..
T Consensus 227 I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~----------~~P~~~~~p~~-~-~~~~~~v~l~w~~~~~~g~~~i~ 294 (731)
T 2v5y_A 227 VVNTTKRDAGKYRCMIRTEGGVGISNYAELVVK----------EPPVPIAPPQL-A-SVGATYLWIQLNANSINGDGPIV 294 (731)
T ss_dssp ECSCCTTTCEEEEEEEEETTEEEECCCEEEEEE----------CCCCBSSCCEE-E-EECSSCEEEECCCSSBSSCSCCC
T ss_pred EcccccccCeEEEEEEECCCCCcceeeEEEEEe----------cCCCCCCCcce-e-ccCCceEEEEeCCcccCCCCccE
Confidence 999999999999999999998744466788888 66654332222 1 2345678888876422 1111
Q ss_pred --eeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEE--cCCccce
Q psy3823 256 --YFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR--NEQGSQR 309 (365)
Q Consensus 256 --~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~--n~~g~~~ 309 (365)
.+.|...+... ..... .....+.|.++...+...|+|.|. |..|...
T Consensus 295 ~Y~v~~~~~~~~~------~~~~~-~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~ 345 (731)
T 2v5y_A 295 AREVEYCTASGSW------NDRQP-VDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGS 345 (731)
T ss_dssp EEEEEEEESSSSC------EEEEE-CCSSEEEECSCCTTCEEEEEEEEECSSTTCSCC
T ss_pred EEEEEEEECCCCc------eEEec-cCcceEEEeCCCCCCEEEEEEEEEecCCCcccc
Confidence 46666543211 11111 122458889998888889999999 9988654
No 224
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.78 E-value=1.8e-18 Score=143.08 Aligned_cols=164 Identities=13% Similarity=0.252 Sum_probs=104.1
Q ss_pred eecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 132 LNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 132 ~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
+.+|++++|.|.+ |.+. +.|+++|..+... ...+.+|.|.+++.+|+|.|+|.+.+.. +..+.|.+.
T Consensus 15 ~~~G~~v~L~C~~---p~~~-i~W~k~g~~l~~~-----~~~~~~L~i~~v~~~DsG~Y~C~~~~~~----s~~~~v~v~ 81 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKN-ITWFKDGKMIGFL-----TEDKKKWNLGSNAKDPRGMYQCKGSQNK----SKPLQVYYR 81 (204)
T ss_dssp CCSSSEEEEEECS---CSSE-EEEEETTEEEEEE-----ESSCCCEEEEEGGGCCEEEEEEESSSSC----CCCEEEEEE
T ss_pred ecCCCeEEEEEcC---CCCE-EEEEECCEECCCC-----CCCCCeEEeCCCCcCCCEEEEEEecCCC----CeeEEEEEE
Confidence 4689999999987 5555 9999999988642 1135689999999999999999964322 233445443
Q ss_pred eeee----ccc----------------c-cCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCC
Q psy3823 212 KMVN----LIF----------------N-SIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRP 270 (365)
Q Consensus 212 ~~~~----~~~----------------~-~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~ 270 (365)
.... ..+ . ....+.+...+.. . ..+|+.++|.|. +.|.+. +.|++++.......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-v-~~~G~~v~L~C~--g~p~p~-i~W~k~~~~l~~~~ 156 (204)
T 1sy6_A 82 MGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYK-V-SISGTTVILTCP--QYPGSE-ILWQHNDKNIGGDE 156 (204)
T ss_dssp C------------------------------------CCCCE-E-EEETTEEEEECS--CCCSSC-EEEEETTEEESCCT
T ss_pred EeccccccccccccccccccccccccccccccccceecCCce-e-eecCCcEEEEcC--CCCCCc-eEEEECCEECCCcc
Confidence 0000 000 0 0001112111111 1 238999999999 788888 99999986443221
Q ss_pred CceeEeeCCCEEEEEEcCC-CcccCeEEEEEEEcCCccc-eecEEEE
Q psy3823 271 LTSYSIQDGSTSVARYTPT-SELEYGTLLCWARNEQGSQ-RTPCTFH 315 (365)
Q Consensus 271 ~~~~~~~~~~~s~l~i~~v-~~~d~G~Y~C~a~n~~g~~-~~~~~l~ 315 (365)
....+... ...|.|.++ +.+|+|.|+|.|.|..|.. +..+.|.
T Consensus 157 ~~~~~~~~--~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~ 201 (204)
T 1sy6_A 157 DDKNIGSD--EDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLR 201 (204)
T ss_dssp TCTTEEEE--TTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEE
T ss_pred CCceEecC--CCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEE
Confidence 11111111 225999999 9999999999999999963 3444443
No 225
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.77 E-value=1.3e-18 Score=143.42 Aligned_cols=168 Identities=11% Similarity=0.208 Sum_probs=113.4
Q ss_pred cceecCCcEEEEEEEEe----cCCCCeeEEEeCCeEEeeCCC----------CceEE---eeceEEEeeecCCCCeEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQA----NPPYKKLIWTHNGITISNNAS----------AGRII---TNQTLVLQSVTRHSGGLYAC 192 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~----~p~~~~i~W~~~~~~l~~~~~----------~~~~~---~~~~l~i~~~~~~d~G~Y~C 192 (365)
..+.+|+++.|.|.+.+ .+.+. +.|++++..+..... .+... .+.+|.|.+++..|+|.|+|
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~-~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTR-IYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCE-EEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccE-EEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 35789999999999853 34444 999999987731110 11111 24689999999999999999
Q ss_pred EEEcCCCCCC----cccEEEEEeeeeecccccCCC---CceecCccceeeeecCceEEEEEEEe-eeCCCceeEEEeCCC
Q psy3823 193 SAINSQGEGG----STPFDLNINKMVNLIFNSIDE---PVCKQSQQRIYGALRNEQVLVSCTVD-ANPQAQYFTWAFNNS 264 (365)
Q Consensus 193 ~~~~~~~~~~----s~~~~l~v~~~~~~~~~~~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~~W~~~~~ 264 (365)
.+.+..|... ...+.|.|. .. |.+.. .....|+.+.|.|.+. +.|.|. +.|+++|.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~----------~~~~~p~~~~-----~~~~~g~~~~l~C~~~~g~P~p~-i~W~k~g~ 146 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVK----------ADFPTPSISD-----FEIPTSNIRRIICSTSGGFPEPH-LSWLENGE 146 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEE----------CCCCCCEEEE-----EECSSTTEEEEEEEEEEESSCEE-EEEEESSC
T ss_pred EEEcCCCCccccccccEEEEEEc----------CCCCCCceEe-----ccCCCCCeEEEEEecCCccCCCE-EEEEECCE
Confidence 9999877554 245667776 33 32221 1124588999999995 899998 99999876
Q ss_pred CCCCCCCceeEeeC-CCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEE
Q psy3823 265 DTAPRPLTSYSIQD-GSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTF 314 (365)
Q Consensus 265 ~~~~~~~~~~~~~~-~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 314 (365)
.............+ +......+..+..+|.|.|+|.|.|..|..+..+.+
T Consensus 147 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 147 ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp EECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred ECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 44322111112222 333333344556689999999999999988765544
No 226
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.77 E-value=9.4e-18 Score=143.87 Aligned_cols=193 Identities=14% Similarity=0.104 Sum_probs=117.8
Q ss_pred CeEeeCCceEEEEecCCcEEEEEEeCCC--CCcceEEEEeCCCcC-CC-------C----------CCceeEe--cCCeE
Q psy3823 12 PVCKQSQQRIYGALRNEQVLVSCTVDAN--PQAQYFTWAFNNSGT-AP-------R----------PLTSYSI--QDGST 69 (365)
Q Consensus 12 p~~~~~~~~~~~v~~G~~~~l~C~~~~~--p~~~~v~W~~~~~~~-l~-------~----------~~~~~~~--~~~~~ 69 (365)
|......+..+.+.+|++++|.|...+. |.+ .+.|+|..... +. . ..+.... .....
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHF-TVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCc-eEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 3334445667788999999999996553 566 99999853210 00 0 0111111 23445
Q ss_pred EEEEEccCCCCCCeEEEEEEEeC------------CCCCcccEEEEEEeccccCCC------CCCCeEEEEcCCccCccc
Q psy3823 70 SVARYTPTSELEYGTLLCWARNE------------QGNQRTPCTFHVVKAGECEHP------VDKPSVQIKLGRNLNASV 131 (365)
Q Consensus 70 ~~l~i~~~~~~d~G~Y~C~a~~~------------~~~~~~~~~l~V~~~~~~~~~------~~~p~~~~~~~~~~~~~~ 131 (365)
.+|.|.+++.+|+|.|.|.+.+. .........|.|........+ ..+|.+...+ ....
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 160 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAP----GTLS 160 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEEC----SEEE
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecC----CeEE
Confidence 67999999999999999999886 111225567787321000000 0033344433 3356
Q ss_pred eecCCcEEEEEEEEecCC-CCeeEEEeC--CeEEe---eC-------CCCceEE--e--eceEEEeeecCCCCeEEEEEE
Q psy3823 132 LNEGVDIYFDCHIQANPP-YKKLIWTHN--GITIS---NN-------ASAGRII--T--NQTLVLQSVTRHSGGLYACSA 194 (365)
Q Consensus 132 ~~~g~~v~l~C~~~~~p~-~~~i~W~~~--~~~l~---~~-------~~~~~~~--~--~~~l~i~~~~~~d~G~Y~C~~ 194 (365)
+.+|++++|.|.+.+.+. +. +.|++. +..+. .. ...+... . ..+|.|.+++.+|+|.|.|.+
T Consensus 161 v~~G~~v~L~C~~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 239 (256)
T 3juy_B 161 LSPGERATFSCRSSHSIRSRR-VAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQV 239 (256)
T ss_dssp ECTTSCEEEEEEESSCCTTCC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEE
T ss_pred EeCCCCEEEEEEECCCcCCee-EEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEE
Confidence 889999999999998775 55 999982 22211 00 0111111 1 346999999999999999999
Q ss_pred EcCCCCCCcccEEEEE
Q psy3823 195 INSQGEGGSTPFDLNI 210 (365)
Q Consensus 195 ~~~~~~~~s~~~~l~v 210 (365)
.+...........|.|
T Consensus 240 ~~~~~~~~g~gt~l~V 255 (256)
T 3juy_B 240 YGASSYTFGQGTKLER 255 (256)
T ss_dssp CCSSCCEECCCEEEEE
T ss_pred eeCCCceEcCCEEEEE
Confidence 9865443334444544
No 227
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.77 E-value=1.9e-18 Score=143.80 Aligned_cols=174 Identities=13% Similarity=0.117 Sum_probs=114.7
Q ss_pred ceecCCcEEEEEEEEecCCCCeeEEEe--CCeEEe---eC-------CCCceE----EeeceEEEeeecCCCCeEEEEEE
Q psy3823 131 VLNEGVDIYFDCHIQANPPYKKLIWTH--NGITIS---NN-------ASAGRI----ITNQTLVLQSVTRHSGGLYACSA 194 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~p~~~~i~W~~--~~~~l~---~~-------~~~~~~----~~~~~l~i~~~~~~d~G~Y~C~~ 194 (365)
.+.+|++++|.|.+.+.+.+. +.|++ ++.... .. ...+.. ..+.+|.|.+++..|+|.|+|.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 89 (213)
T 3mj8_L 11 SVALGQKATITCSGDKLSDVY-VHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQS 89 (213)
T ss_dssp EEETTSCEEEEEECSSTTTSC-EEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EEeCCCCEEEEEEcCCCCCce-EEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEEe
Confidence 577999999999999877777 99998 222111 00 011121 12457999999999999999999
Q ss_pred EcCCC--CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeCCCCCCCCCC
Q psy3823 195 INSQG--EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNSDTAPRPL 271 (365)
Q Consensus 195 ~~~~~--~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~~~ 271 (365)
.+..+ ......+.|.|... ...+|.+........ +..|+.++|.|.+.+.+++ ..+.|+++|........
T Consensus 90 ~~~~~~~~~~~~~~~l~V~~~------~~~~P~i~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 162 (213)
T 3mj8_L 90 WDGTNSAWVFGSGTKVTVLGQ------PNAAPSVTLFPPSSE-ELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVK 162 (213)
T ss_dssp EETTTTEEEEBCCEEEEEECS------CCBCCEEEEECCCHH-HHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEE
T ss_pred ccCCcceeEEcCceEEEEeCC------CCCCCeEEccCCCcc-cccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcc
Confidence 99887 23335567777610 002344433222222 4479999999999986433 24999998875432111
Q ss_pred cee-EeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecE
Q psy3823 272 TSY-SIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPC 312 (365)
Q Consensus 272 ~~~-~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 312 (365)
... ...++. .+.|.|.++..+|+|.|+|.|.|..+....++
T Consensus 163 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 163 TTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp ECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred cCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 100 112222 24589999999999999999999987766544
No 228
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.77 E-value=7.2e-18 Score=144.29 Aligned_cols=186 Identities=14% Similarity=0.230 Sum_probs=120.9
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCC---CCceEEeeceEEEeeecCCCCeEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNA---SAGRIITNQTLVLQSVTRHSGGLY 190 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~---~~~~~~~~~~l~i~~~~~~d~G~Y 190 (365)
..+|.+...+. ..+.+|++|+|.|.+.+ +.+ .+.|+|+|..+.... .......+..|.|.+++.+|+|.|
T Consensus 5 ~~kP~i~~~P~-----~~V~~G~~VtL~C~~~~-~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y 77 (257)
T 1b6u_A 5 HRKPSLLAHPG-----PLVKSEETVILQCWSDV-RFQ-HFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTY 77 (257)
T ss_dssp CCCCEECCBSC-----SEEESSCCEEEEEEESS-CCS-EEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEE
T ss_pred CCCCEEEEcCC-----CEecCCCCEEEEEecCC-CCc-EEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEE
Confidence 45676655432 36789999999999864 334 499999886543110 000112356899999999999999
Q ss_pred EEEEEcCCC----CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCC
Q psy3823 191 ACSAINSQG----EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDT 266 (365)
Q Consensus 191 ~C~~~~~~~----~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~ 266 (365)
+|.+.+... ...+..+.|.|.. ...+|.+...+.. .+.+|+.++|.|.+.+.+ +. +.|+++|...
T Consensus 78 ~C~a~~~~~~~~~s~~S~~~~L~V~~-------~~~~P~l~~~p~~--~V~~G~~vtL~C~~~~~~-~~-~~w~k~g~~~ 146 (257)
T 1b6u_A 78 RCYGSVTHSPYQLSAPSDPLDIVITG-------LYEKPSLSAQPGP--TVLAGESVTLSCSSRSSY-DM-YHLSREGEAH 146 (257)
T ss_dssp EEEEECSSCTTSCCCCCCCEEEEEEC-------SSCCCEEECSSCT--TCBTTCEEEEEEECSSCC-SE-EEEEETTSSC
T ss_pred EEeEeccCCCccccccCCCEEEeccc-------CCCCcceEccCCC--ccCCCCEEEEEEeCCCCC-cE-EEEEECCccc
Confidence 999986432 2345677888871 1134555543322 278999999999987653 55 9999998744
Q ss_pred CCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCc-----cceecEEEEEEcC
Q psy3823 267 APRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG-----SQRTPCTFHVVKA 319 (365)
Q Consensus 267 ~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~~ 319 (365)
.................|.|.+++ |+|.|+|.|.|..+ ..+..+.|.|...
T Consensus 147 ~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~ 202 (257)
T 1b6u_A 147 ERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGN 202 (257)
T ss_dssp EECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCC
T ss_pred CcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEecc
Confidence 221111111111234569999998 99999999997632 2345566666543
No 229
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.77 E-value=2.2e-17 Score=143.22 Aligned_cols=189 Identities=11% Similarity=0.157 Sum_probs=117.4
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC----CC---------CCCceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT----AP---------RPLTSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~----l~---------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
+..+.+.+|++++|.|.+.+.|.+ .+.|+|++... +. ...+.....++....|.|.+++.+|+|.|
T Consensus 19 p~~~~v~~G~~v~L~C~~~~~p~~-~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 97 (276)
T 3auv_A 19 PSSLSASVGDRVTITCRASQDVST-AVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATY 97 (276)
T ss_dssp CSEEECCTTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCeEEEcCCCCEEEEeEcCCCCCC-cEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEE
Confidence 456778999999999998888888 99999975320 10 01111222233445899999999999999
Q ss_pred EEEEEeCCCCCc-ccEEEEEEeccccC----CCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC-CCeeEEEeCC
Q psy3823 86 LCWARNEQGNQR-TPCTFHVVKAGECE----HPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP-YKKLIWTHNG 159 (365)
Q Consensus 86 ~C~a~~~~~~~~-~~~~l~V~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~~~i~W~~~~ 159 (365)
+|.+.+..+... ....|.|....... ....+|.+.+... ....+.+|++++|.|.+.+.++ ...+.|++++
T Consensus 98 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p---~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 174 (276)
T 3auv_A 98 YCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVES---GGGLVQPGGSLRLSCAASGFTISDYWIHWVRQA 174 (276)
T ss_dssp EEEECSSSSCCCCCCEEEEC-----------------CCEEEEE---CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEC
T ss_pred EEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECC---CceEecCCCeEEEEEEecCccCCCCEEEEEEcC
Confidence 999998755422 44677773210000 0001222222221 2346889999999999998763 3449999852
Q ss_pred --eEE---e------------eCCCCceEEe------eceEEEeeecCCCCeEEEEEEEcCC----CCCCcccEEEEEe
Q psy3823 160 --ITI---S------------NNASAGRIIT------NQTLVLQSVTRHSGGLYACSAINSQ----GEGGSTPFDLNIN 211 (365)
Q Consensus 160 --~~l---~------------~~~~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~~----~~~~s~~~~l~v~ 211 (365)
..+ . .....+.... ..+|.|.+++.+|+|.|+|.+.|.. .........|.|.
T Consensus 175 ~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~ 253 (276)
T 3auv_A 175 PGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVS 253 (276)
T ss_dssp TTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC
T ss_pred CCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEEEEEc
Confidence 221 0 0011122222 2379999999999999999999973 2223234566665
No 230
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.77 E-value=3.5e-18 Score=147.39 Aligned_cols=172 Identities=17% Similarity=0.260 Sum_probs=115.5
Q ss_pred CceEEEEecCCcEEEEEEeC---CCCCcceEEEEeCCCcCCCCCCc------------------eeEe--cCCeEEEEEE
Q psy3823 18 QQRIYGALRNEQVLVSCTVD---ANPQAQYFTWAFNNSGTAPRPLT------------------SYSI--QDGSTSVARY 74 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~---~~p~~~~v~W~~~~~~~l~~~~~------------------~~~~--~~~~~~~l~i 74 (365)
.+..+.+.+|+.++|.|... +.|.+ .+.|++++.. ...... .... ......+|.|
T Consensus 11 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~-~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 88 (268)
T 3mj6_A 11 SSPQLRVHVGESVLMGCVVQRTEEKHVD-RVDWLFSKDK-DDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLL 88 (268)
T ss_dssp -CCEEEEETTCCEEECCBCCCSSCCCEE-EEEEEEESSS-TTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEE
T ss_pred CCCceEEecCCcEEEEEEeecCCCCceE-EEEEEEeCCC-CCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEE
Confidence 34557789999999999965 56667 9999997654 322211 0100 0111247999
Q ss_pred ccCCCCCCeEEEEEEEeCCCCCc--ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEE---EecCC
Q psy3823 75 TPTSELEYGTLLCWARNEQGNQR--TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI---QANPP 149 (365)
Q Consensus 75 ~~~~~~d~G~Y~C~a~~~~~~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~---~~~p~ 149 (365)
.+++.+|+|.|+|.+.+..+... ..+.|.|. ...| ....+.+|+.++|.|.+ .+.|.
T Consensus 89 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--------~~~p----------~~~~v~~G~~v~L~C~~~~~~~~p~ 150 (268)
T 3mj6_A 89 QDVQKADEGIYTCEIRLKNESMVMKKPVELWVL--------PEEP----------RDLRVRVGDTTQMRCSIQSTEEKRV 150 (268)
T ss_dssp CSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE--------CCCC----------SEEEEETTCCEEECCBCEESSSSCC
T ss_pred CCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe--------ccCC----------CccccccCCcEEEEEEecCCCCCCc
Confidence 99999999999999998765543 55666662 1111 22357899999999999 45566
Q ss_pred CCeeEEEeC-CeE------Eee-----------CCC--CceE------EeeceEEEeeecCCCCeEEEEEEEcCCCCCCc
Q psy3823 150 YKKLIWTHN-GIT------ISN-----------NAS--AGRI------ITNQTLVLQSVTRHSGGLYACSAINSQGEGGS 203 (365)
Q Consensus 150 ~~~i~W~~~-~~~------l~~-----------~~~--~~~~------~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s 203 (365)
+. +.|+++ +.. +.. ... .+.. ..+.+|.|.+++.+|+|.|+|.|.|..+...
T Consensus 151 ~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~- 228 (268)
T 3mj6_A 151 TK-VNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESR- 228 (268)
T ss_dssp CE-EEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEE-
T ss_pred cc-eEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEE-
Confidence 66 999983 321 100 000 0111 1256899999999999999999999777544
Q ss_pred ccEEEEEe
Q psy3823 204 TPFDLNIN 211 (365)
Q Consensus 204 ~~~~l~v~ 211 (365)
..+.|.|.
T Consensus 229 ~~~~l~V~ 236 (268)
T 3mj6_A 229 KTIVLHVV 236 (268)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 66778875
No 231
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.77 E-value=3.2e-18 Score=143.04 Aligned_cols=172 Identities=15% Similarity=0.209 Sum_probs=113.2
Q ss_pred ceecCCcEEEEEEEEecCCCC--eeEEEeCCeEEeeC--C------------CCc-----------eEEeeceEEEeeec
Q psy3823 131 VLNEGVDIYFDCHIQANPPYK--KLIWTHNGITISNN--A------------SAG-----------RIITNQTLVLQSVT 183 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~p~~~--~i~W~~~~~~l~~~--~------------~~~-----------~~~~~~~l~i~~~~ 183 (365)
....|++|+|.|.+.+.+.+. .+.|++++..+... . ..+ ....+.+|.|.+++
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~ 91 (225)
T 4fmk_A 12 RGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLR 91 (225)
T ss_dssp EEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCC
T ss_pred EEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCC
Confidence 457899999999998766553 37899976443210 0 000 01124579999999
Q ss_pred CCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEe-eeCCCceeEEEeC
Q psy3823 184 RHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVD-ANPQAQYFTWAFN 262 (365)
Q Consensus 184 ~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~~W~~~ 262 (365)
.+|+|.|.|.+.+..+........+.+. .+|.......... ...++...+.|.+. +.|++. +.|+++
T Consensus 92 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~c~~~~~~P~~~-~~w~~~ 159 (225)
T 4fmk_A 92 VEDEGNYTCEFATFPNGTRRGVTWLRVI----------AQPENHAEAQEVT-IGPQSVAVARCVSTGGRPPAR-ITWISS 159 (225)
T ss_dssp GGGCEEEEEEEEEETTEEEEEEEEEEEE----------BCCEEEEEECCBC-CSSSCEEEEEEEEEEEBSCCE-EEEECS
T ss_pred HHHCcceEEEEEeCCCcceeeeeeeeee----------cCCceeeccccee-ecceeeeeeeeeecCCCCCCE-EEEEEC
Confidence 9999999999998877555444555555 4554443332222 55677777777775 467776 999987
Q ss_pred CCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEEE
Q psy3823 263 NSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFH 315 (365)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 315 (365)
+..... ........++. .+.|.|.++..+|+|.|+|.|.|..|.......+.
T Consensus 160 ~~~~~~-~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~ 214 (225)
T 4fmk_A 160 LGGEAK-DTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVT 214 (225)
T ss_dssp SCCEEE-EEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred CccccC-CcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEE
Confidence 653221 11111122333 35799999999999999999999998765444443
No 232
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.77 E-value=3.5e-17 Score=140.29 Aligned_cols=177 Identities=12% Similarity=0.247 Sum_probs=118.3
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeEEe---e-C-----------CCCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GITIS---N-N-----------ASAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~l~---~-~-----------~~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++++|.|.+.+.+ .+. +.|+++ +..+. . . ...+.... ..+|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~g~~~~~~~-v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (256)
T 1nqb_A 10 ELVKPGASVKLSCKASGYTFTSYW-MHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTS 88 (256)
T ss_dssp EEECTTCCEEEEEEECSSCGGGSC-EEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred eeecCCCcEEEEEEeccccCCCce-EEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCCh
Confidence 3678999999999998765 445 999983 32221 0 0 01122221 34799999999
Q ss_pred CCCeEEEEEEEcCCCC----CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-----c
Q psy3823 185 HSGGLYACSAINSQGE----GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-----Q 255 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~----~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-----~ 255 (365)
+|+|.|.|.+.+..|. .....+.|.|. ..|.+...+.. ..+.+|+.++|.|.+.+.|++ .
T Consensus 89 ~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~----------~~~~v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~~~~ 157 (256)
T 1nqb_A 89 EDSAVYYCARYDYYGSSYFDYWGQGTTVTVS----------SDIELTQTPLS-LPVSLGDQASISCRSSQSIVHSNGNTY 157 (256)
T ss_dssp GGCEEEEEEECCTTSSSSCSEECCCEEEEEC----------CCCCEEEECSE-EEECTTCCEEEEEEESSCCBCTTSCBC
T ss_pred hhCEEEEEEEeeccCccceeEEcCceeeeec----------ccccEEecCcE-EEEecCCcEEEEeEecCcccccccceE
Confidence 9999999999988652 12234677777 66655443333 338899999999999988765 6
Q ss_pred eeEEEe--CCCCCC-----------CCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcc-ceecEEEEEEcC
Q psy3823 256 YFTWAF--NNSDTA-----------PRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGS-QRTPCTFHVVKA 319 (365)
Q Consensus 256 ~~~W~~--~~~~~~-----------~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~ 319 (365)
+.|++ +|.... ....++..........|.|.+++.+|+|.|+|.|.|..+. ......|.|..+
T Consensus 158 -v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 158 -LEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRA 234 (256)
T ss_dssp -EEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC-
T ss_pred -EEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECC
Confidence 99999 443210 0012222233445667999999999999999999985432 223445666544
No 233
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.77 E-value=2.3e-18 Score=142.01 Aligned_cols=164 Identities=12% Similarity=0.049 Sum_probs=109.0
Q ss_pred EEEEecCCcEEEEEEeCC----CCCcceEEEEeCCCcCCCC---C---------CceeEecCCeEEEEEEccCCCCCCeE
Q psy3823 21 IYGALRNEQVLVSCTVDA----NPQAQYFTWAFNNSGTAPR---P---------LTSYSIQDGSTSVARYTPTSELEYGT 84 (365)
Q Consensus 21 ~~~v~~G~~~~l~C~~~~----~p~~~~v~W~~~~~~~l~~---~---------~~~~~~~~~~~~~l~i~~~~~~d~G~ 84 (365)
.+.+.+|++++|.|.+.. .|.+ .+.|++++.. +.. . ....... .....|.|.+++.+|+|.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~-~~~W~~~~~~-i~~~~~~~~~~~~~~~~r~~~~~-~~~~~L~I~~v~~~D~G~ 79 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQT-RIYWQKEKKM-VLTMMSGDMNIWPEYKNRTIFDI-TNNLSIVILALRPSDEGT 79 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHC-EEEEEETTEE-EEEEETTEEEECHHHHTTEEEES-TTTTEEEECSCCGGGCEE
T ss_pred eEEEEeCCCEEEecccCCCccccccc-EEEEEeCCcE-EEEEeCCceeecCcccceeEEcc-CCCcEEEEecccchhCeE
Confidence 466889999999999643 3556 9999999876 420 0 0001111 112379999999999999
Q ss_pred EEEEEEeCCCCCc-----ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEE-ecCCCCeeEEEeC
Q psy3823 85 LLCWARNEQGNQR-----TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQ-ANPPYKKLIWTHN 158 (365)
Q Consensus 85 Y~C~a~~~~~~~~-----~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~~i~W~~~ 158 (365)
|+|.+.+..+... ..+.|.|... ...|.+.+.. ...|+.+.|.|.+. |.|.|. +.|+++
T Consensus 80 Y~C~~~~~~g~~~~~~~~~~~~l~V~~~------~~~p~~~~~~--------~~~g~~~~l~C~~~~g~P~p~-i~W~k~ 144 (201)
T 1dr9_A 80 YECVVLKYEKDAFKREHLAEVTLSVKAD------FPTPSISDFE--------IPTSNIRRIICSTSGGFPEPH-LSWLEN 144 (201)
T ss_dssp EEEEEEECCTTSCEEEEEEEEEEEEECC------CCCCEEEEEE--------CSSTTEEEEEEEEEEESSCEE-EEEEES
T ss_pred EEEEEEcCCCCccccccccEEEEEEcCC------CCCCceEecc--------CCCCCeEEEEEecCCccCCCE-EEEEEC
Confidence 9999999776543 4677777321 1235544321 23588999999996 888886 999999
Q ss_pred CeEEeeCCCCceEEee-ceE---EEeeecCCCCeEEEEEEEcCCCCCC
Q psy3823 159 GITISNNASAGRIITN-QTL---VLQSVTRHSGGLYACSAINSQGEGG 202 (365)
Q Consensus 159 ~~~l~~~~~~~~~~~~-~~l---~i~~~~~~d~G~Y~C~~~~~~~~~~ 202 (365)
|..+............ +.+ .+..+...|.|.|+|.|.|..+...
T Consensus 145 g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s 192 (201)
T 1dr9_A 145 GEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVN 192 (201)
T ss_dssp SCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEE
T ss_pred CEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceee
Confidence 9988643211111111 111 2345567899999999999987543
No 234
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.77 E-value=5.4e-18 Score=141.73 Aligned_cols=170 Identities=11% Similarity=0.130 Sum_probs=110.4
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCC--CcCCC------C-----------CCceeEe--cCCeEEEEEEc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNN--SGTAP------R-----------PLTSYSI--QDGSTSVARYT 75 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~--~~~l~------~-----------~~~~~~~--~~~~~~~l~i~ 75 (365)
+....+.+|++++|.|.+.+.| .+ .+.|+|++ .. +. . ..+.... .......|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~k~~~g~~-~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNY-GMNWVKQAPGKA-LKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQIN 84 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGS-EEEEEEECTTSC-EEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEEC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccc-eEEEEEeCCCCC-cEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEEC
Confidence 3445789999999999976665 56 99999974 22 11 0 0111111 11234589999
Q ss_pred cCCCCCCeEEEEEEEeCCCCC----cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCC
Q psy3823 76 PTSELEYGTLLCWARNEQGNQ----RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPY 150 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~~~----~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~ 150 (365)
+++.+|+|.|+|.+.+..+.. ...+.|.|... +..+|.+...... ..+.+|+.++|.|.+.+ +|.+
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-----~~~~P~i~~~~~~----~~~~~g~~v~L~C~~~g~~P~p 155 (219)
T 1c1e_H 85 NLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSA-----KTTPPSVYPLAPG----SAAQTNSMVTLGCLVKGYFPEP 155 (219)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCC-----CCBCCEEEEECCC----SSSCCSSEEEEEEEEEEEBSSC
T ss_pred CCCcccCEEEEEEEeccCcccceeecCceEEEEecC-----CCCCCeEEEecCc----cccccCCeEEEEEEcccccCCC
Confidence 999999999999999876321 14567777310 1224665544322 24568999999999998 7877
Q ss_pred CeeEEEeCCeEEeeCCCC-----ceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 151 KKLIWTHNGITISNNASA-----GRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 151 ~~i~W~~~~~~l~~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
..+.|+++|..+...... +.......|.|.. ...|.|.|+|.|.|..+.
T Consensus 156 ~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~-~~~d~g~Y~C~a~n~~~~ 209 (219)
T 1c1e_H 156 VTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPS-SPRPSETVTCNVAHPASS 209 (219)
T ss_dssp CEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEES-SSTTTSCCEEEEEEGGGT
T ss_pred eEEEEEeCCcccceEecCCcccCCeEEEEEEEEEec-ccCCCCEEEEEEEeCCCC
Confidence 459999998764211111 1112234688844 444569999999998764
No 235
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.77 E-value=1.1e-17 Score=143.46 Aligned_cols=185 Identities=13% Similarity=0.101 Sum_probs=116.8
Q ss_pred EEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-CC-----------------CCCceeEe--cCCeEEEEEEccCC
Q psy3823 21 IYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-AP-----------------RPLTSYSI--QDGSTSVARYTPTS 78 (365)
Q Consensus 21 ~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l~-----------------~~~~~~~~--~~~~~~~l~i~~~~ 78 (365)
...+.+|++++|.|.+.+.+ .+ .+.|+|..... +. ...+.... .......|.|.+++
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 11 LELVKPGASVKISCKTSGYTFTEY-TMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred ceEEcCCCCEEEEEEEeccccccc-EEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 35589999999999976655 56 99999853210 10 00111111 22345579999999
Q ss_pred CCCCeEEEEEEEeCCC----CCcccEEEEEEecccc-------CCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec
Q psy3823 79 ELEYGTLLCWARNEQG----NQRTPCTFHVVKAGEC-------EHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN 147 (365)
Q Consensus 79 ~~d~G~Y~C~a~~~~~----~~~~~~~l~V~~~~~~-------~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 147 (365)
.+|+|.|.|.+.+... .......|.|...... .....+|.+...+ ....+.+|++++|.|.+.+.
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~v~~G~~v~L~C~~~~~ 165 (256)
T 3umt_A 90 SEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSP----SSLSASLGERVSITCRASQD 165 (256)
T ss_dssp GGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEEC----SEEEECTTCCEEEEEEESSC
T ss_pred cccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCC----CeEEEECCCCEEEEEEEecC
Confidence 9999999999988622 1225577887311000 0000144544443 23468899999999999988
Q ss_pred CCCCeeEEEeC--CeEEe---eC-------CCCceEEe----eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 148 PPYKKLIWTHN--GITIS---NN-------ASAGRIIT----NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 148 p~~~~i~W~~~--~~~l~---~~-------~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
+.+. +.|+++ +..+. .. ...+.... ..+|.|.+++.+|+|.|+|.+.+...........|.|.
T Consensus 166 ~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~ 244 (256)
T 3umt_A 166 IGSN-LNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIK 244 (256)
T ss_dssp CTTC-EEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred CCcE-EEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEE
Confidence 7775 999983 22221 00 01111111 34699999999999999999998655444455677776
No 236
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.77 E-value=1.1e-17 Score=142.45 Aligned_cols=175 Identities=12% Similarity=0.086 Sum_probs=116.1
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeC----------------CCcCCCCC---Ccee-EecCCeEEEEEEccCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFN----------------NSGTAPRP---LTSY-SIQDGSTSVARYTPTS 78 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~----------------~~~~l~~~---~~~~-~~~~~~~~~l~i~~~~ 78 (365)
+..+.+.+|+.++|.|...+.|.+ .+.|+|. +.. .... .+.. ........+|.|.+++
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 85 (246)
T 4dzb_B 8 PSWVISKSGTSVKIECRSLDFQAT-TMFWYRQFPKQSLMLMATSNEGSKAT-YEQGVEKDKFLINHASLTLSTLTVTSAH 85 (246)
T ss_dssp CSEEEEETTSCEEEEEEESSSCCC-SEEEEEECTTSCCEEEEEECTTSCCE-ECTTCCGGGEEEEEEETTEEEEEECSCC
T ss_pred CcEEEEeCCCcEEEEeEecCCCce-EEEEEEECCCCCcEEEEEEccCCCce-ecCcccCCcEEEEecCCCEEEEEECCCC
Confidence 456778999999999997778888 9999993 211 1111 1111 1112335589999999
Q ss_pred CCCCeEEEEEEEeCCCC----CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCC-Cee
Q psy3823 79 ELEYGTLLCWARNEQGN----QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPY-KKL 153 (365)
Q Consensus 79 ~~d~G~Y~C~a~~~~~~----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~~i 153 (365)
.+|+|.|+|.+.+..+. ......|.|..... +..+|.+.+.... ...+.+|+.++|.|.+.+.+++ ..+
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~---~~~~P~i~~~~~~---~~~~~~g~~v~L~C~~~g~~p~~~~v 159 (246)
T 4dzb_B 86 PEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLK---NVFPPEVAVFEPS---EAEISHTQKATLVCLATGFYPDHVEL 159 (246)
T ss_dssp GGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGG---GCBCCEEEEECCC---HHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred HHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCC---cccCCceEeecCC---chhccCCCcEEEEEEEccCcCCceEE
Confidence 99999999999875431 11556777732100 0246666554322 2345679999999999986654 259
Q ss_pred EEEeCCeEEeeCCC-------------CceEEeeceEEEeeecCCC-CeEEEEEEEcCCCCC
Q psy3823 154 IWTHNGITISNNAS-------------AGRIITNQTLVLQSVTRHS-GGLYACSAINSQGEG 201 (365)
Q Consensus 154 ~W~~~~~~l~~~~~-------------~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~~ 201 (365)
.|+++|..+..... .+.......|.|.....+| +|.|+|.|.|.....
T Consensus 160 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~ 221 (246)
T 4dzb_B 160 SWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 221 (246)
T ss_dssp EEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred EEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCC
Confidence 99999998853211 1112223458888888888 999999999976543
No 237
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.76 E-value=4.7e-17 Score=137.78 Aligned_cols=162 Identities=15% Similarity=0.253 Sum_probs=106.6
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeC--CeEEe-------------eCCCCceEE-----eeceEEEeeecCCCCeE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHN--GITIS-------------NNASAGRII-----TNQTLVLQSVTRHSGGL 189 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~--~~~l~-------------~~~~~~~~~-----~~~~l~i~~~~~~d~G~ 189 (365)
..+.+|++|+|.|. .+.+.+. +.|+++ +..+. .....+... ...+|.|.+++.+|+|.
T Consensus 10 ~~v~~G~~v~L~C~-~~~~~~~-i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~ 87 (238)
T 2p1y_A 10 KVAVTGGKVTLSCN-QTNNHNN-MYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSV 87 (238)
T ss_dssp EEEETTCCEEEEEE-ECSCCSE-EEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEE
T ss_pred eEEeCCCEEEEEee-cCCCCcc-EEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCee
Confidence 46789999999999 6666665 999984 22211 000111211 13479999999999999
Q ss_pred EEEEEEcCCCCC----CcccEEEEEeeeeecccccCCCC------------ceecCccceeeeecCceEEEEEEEeeeCC
Q psy3823 190 YACSAINSQGEG----GSTPFDLNINKMVNLIFNSIDEP------------VCKQSQQRIYGALRNEQVLVSCTVDANPQ 253 (365)
Q Consensus 190 Y~C~~~~~~~~~----~s~~~~l~v~~~~~~~~~~~~~p------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 253 (365)
|.|.+.+..+.. ......|.|. ..+ .+...+ ....+.+|+.++|.|.+.+.|.
T Consensus 88 Y~C~~~~~~g~~~~~~~~~~~~l~V~----------~~~~~~~p~~~~~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~p~ 156 (238)
T 2p1y_A 88 YFCASGDLGQTNERLFFGHGTKLSVL----------GSADDAKKDAAKKDGQVRQSP-QSLTVWEGETAILNCSYENSAF 156 (238)
T ss_dssp EEEEEEC------CEEECCCEEEEEE----------CCCHHHHHHHHHHHTCCEEEC-SEEEEETTSCEEEEEECCCTTC
T ss_pred EEEEEEeCCCccccceeCCCeEEEEe----------ccCCCCcCCcccceeeEEccC-ceEEEeCCCeEEEEEEEecCCC
Confidence 999999876521 1134567776 333 222222 2233889999999999999988
Q ss_pred CceeEEEeCCCCCCCC-------------CCceeEe--eCCCEEEEEEcCCCcccCeEEEEEEEcCC
Q psy3823 254 AQYFTWAFNNSDTAPR-------------PLTSYSI--QDGSTSVARYTPTSELEYGTLLCWARNEQ 305 (365)
Q Consensus 254 ~~~~~W~~~~~~~~~~-------------~~~~~~~--~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~ 305 (365)
+. +.|++++...... ..+.... .......|.|.+++.+|+|.|+|.|.|..
T Consensus 157 ~~-i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 157 DY-FPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CE-EEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred Cc-EEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 87 9999965311110 1111111 23445689999999999999999999984
No 238
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.76 E-value=3e-18 Score=142.51 Aligned_cols=174 Identities=11% Similarity=0.130 Sum_probs=112.1
Q ss_pred cceecCCcEEEEEEEEecCC---CCeeEEEeC--CeEEee----------CCCCceEEe----eceEEEeeecCCCCeEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPP---YKKLIWTHN--GITISN----------NASAGRIIT----NQTLVLQSVTRHSGGLY 190 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~---~~~i~W~~~--~~~l~~----------~~~~~~~~~----~~~l~i~~~~~~d~G~Y 190 (365)
..+.+|++++|.|.+.+.+. +. +.|+++ +..+.. ....+.... ..+|.|.+++..|+|.|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (212)
T 1q0x_L 10 LTTSPGETVTLTCRSSTGAVTTSNY-ANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIY 88 (212)
T ss_dssp EEECTTCCEEEEEEESSSCCCGGGC-CEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EeecCCCCEEEEEEecccccCCCCe-EEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEE
Confidence 46789999999999988763 44 999985 333210 011122211 34899999999999999
Q ss_pred EEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeCCCCCCCC
Q psy3823 191 ACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNSDTAPR 269 (365)
Q Consensus 191 ~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~ 269 (365)
.|.+.+..+........|.|... ...+|.+........ +..|+.++|.|.+.+.+++ ..+.|+++|......
T Consensus 89 ~C~~~~~~~~~~~~~~~l~V~~~------~~~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 161 (212)
T 1q0x_L 89 FCALWSNNKLVFGGGTKLTVLGQ------PKSSPTVTLFPPSSE-ELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAG 161 (212)
T ss_dssp EEEEECSSCEEECCCEEEEECCS------CCBCCEEEEECCCHH-HHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTT
T ss_pred EEEEecCchhhcCCCeEEEEecC------CCCCCeeEEeCCCHH-HccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCC
Confidence 99999876643334456666410 003455443222211 4468999999999986544 249999988643322
Q ss_pred CCc--eeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceec
Q psy3823 270 PLT--SYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTP 311 (365)
Q Consensus 270 ~~~--~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 311 (365)
... .....++. .+.|.|..+..+|+|.|+|.|.|.......+
T Consensus 162 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 162 METTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp EEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred eecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 110 11122222 3568899999999999999999987665443
No 239
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.76 E-value=2.4e-17 Score=141.06 Aligned_cols=188 Identities=13% Similarity=0.086 Sum_probs=119.3
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCc-CCC-----------------CCCceeEe--cCCeEEEEEEcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSG-TAP-----------------RPLTSYSI--QDGSTSVARYTP 76 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~-~l~-----------------~~~~~~~~--~~~~~~~l~i~~ 76 (365)
+....+.+|++++|.|.+.+.+ .+ .+.|+|.... .+. ...+.... ......+|.|.+
T Consensus 8 p~~~~v~~G~~v~L~C~~~g~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 86 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTASGFNIKDT-YMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSS 86 (253)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGS-CEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCeeecCCCcEEEEEEeeCCcccCc-eEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCC
Confidence 3456789999999999977644 56 9999993211 010 00111111 223455799999
Q ss_pred CCCCCCeEEEEEEEeCCCCCc-ccEEEEEEeccccC------CCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC
Q psy3823 77 TSELEYGTLLCWARNEQGNQR-TPCTFHVVKAGECE------HPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP 149 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~------~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~ 149 (365)
++.+|+|.|+|.+.+..+... ....|.|....... .+..+|.+...+ ....+.+|++++|.|.+.+.+.
T Consensus 87 v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p----~~~~v~~G~~v~L~C~~~~~~~ 162 (253)
T 3uzq_A 87 LTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTP----ASLAVSLGQRATISCRASENVD 162 (253)
T ss_dssp CCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEEC----SEEEECTTSCEEEEEEESSCCE
T ss_pred CCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcC----CeEEEeCCCCEEEEEEecCccc
Confidence 999999999999998554432 56777773210000 001234444433 2346889999999999998776
Q ss_pred C---CeeEEEeC--CeEEe---eC-------CCCceEEe----eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEE
Q psy3823 150 Y---KKLIWTHN--GITIS---NN-------ASAGRIIT----NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNI 210 (365)
Q Consensus 150 ~---~~i~W~~~--~~~l~---~~-------~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v 210 (365)
+ ..+.|+++ +..+. .. ...+.... ..+|.|.+++.+|+|.|.|.+.|..+.....-..|.|
T Consensus 163 ~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v 242 (253)
T 3uzq_A 163 RYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEI 242 (253)
T ss_dssp ETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEE
T ss_pred cCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEE
Confidence 5 23999983 22211 00 00111111 3469999999999999999999977666556677887
Q ss_pred e
Q psy3823 211 N 211 (365)
Q Consensus 211 ~ 211 (365)
.
T Consensus 243 ~ 243 (253)
T 3uzq_A 243 K 243 (253)
T ss_dssp C
T ss_pred c
Confidence 7
No 240
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.76 E-value=2.3e-17 Score=137.77 Aligned_cols=177 Identities=13% Similarity=0.131 Sum_probs=113.9
Q ss_pred EEEEecCCcEEEEEEeCCCCCcc--eEEEEeCCCcCCCC----------------CCcee-------EecCCeEEEEEEc
Q psy3823 21 IYGALRNEQVLVSCTVDANPQAQ--YFTWAFNNSGTAPR----------------PLTSY-------SIQDGSTSVARYT 75 (365)
Q Consensus 21 ~~~v~~G~~~~l~C~~~~~p~~~--~v~W~~~~~~~l~~----------------~~~~~-------~~~~~~~~~l~i~ 75 (365)
.+.+..|++++|.|.+.+.|.+. .++|+|++.. +.. ..... ........+|.|.
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGT-VVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSC-EEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCc-ceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 45678999999999977666551 5899998754 210 00000 0011223479999
Q ss_pred cCCCCCCeEEEEEEEeCCCCCc-ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeE
Q psy3823 76 PTSELEYGTLLCWARNEQGNQR-TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLI 154 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~ 154 (365)
+++.+|+|.|+|.+.+..+... ....+.+ ..+|.....+. .....+++.+.+.|.+.+.+++..+.
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~~~c~~~~~~P~~~~~ 155 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRGVTWLRV---------IAQPENHAEAQ----EVTIGPQSVAVARCVSTGGRPPARIT 155 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEE---------EBCCEEEEEEC----CBCCSSSCEEEEEEEEEEEBSCCEEE
T ss_pred cCCHHHCcceEEEEEeCCCcceeeeeeeee---------ecCCceeeccc----ceeecceeeeeeeeeecCCCCCCEEE
Confidence 9999999999999988766554 4444454 34555444332 23455677788888776544444499
Q ss_pred EEeCCeEEeeC-----CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCC-cccEEEEEe
Q psy3823 155 WTHNGITISNN-----ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGG-STPFDLNIN 211 (365)
Q Consensus 155 W~~~~~~l~~~-----~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-s~~~~l~v~ 211 (365)
|++++..+... ...+.....+.|.|.++..+|+|.|+|.|.|..+... +..+.|.|.
T Consensus 156 w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 156 WISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred EEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 99876554321 1111222245799999999999999999999887543 344555554
No 241
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=5.7e-17 Score=138.11 Aligned_cols=185 Identities=13% Similarity=0.163 Sum_probs=114.8
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeEEe---------------eCCCCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GITIS---------------NNASAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~l~---------------~~~~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++++|.|.+.+.| .+. +.|+++ +..+. .....+.... ..+|.|.+++.
T Consensus 12 ~~v~~G~~v~L~C~~~g~p~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (247)
T 2ghw_B 12 GVVQPGKSLRLSCAASGFAFSSYA-MHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 90 (247)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSC-EEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEEecCCcEEEEEEeccccCCCce-EEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCH
Confidence 4678999999999999876 455 999983 21110 0011122221 24799999999
Q ss_pred CCCeEEEEEEEcCCCC-CCcccEEEEEeeeeec-----ccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeE
Q psy3823 185 HSGGLYACSAINSQGE-GGSTPFDLNINKMVNL-----IFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFT 258 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~-~~s~~~~l~v~~~~~~-----~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~ 258 (365)
+|+|.|.|.+.|..+. .......|.|...... ......++.+...+ ....+.+|+.++|.|.+.+.|++. +.
T Consensus 91 ~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~-v~ 168 (247)
T 2ghw_B 91 EDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSP-ATLSLSPGERATLSCRASQSVRSN-LA 168 (247)
T ss_dssp GGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEEC-SEEEECTTSCEEEEEEESSCCTTC-EE
T ss_pred HHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccC-CEEEecCCCcEEEEEEeCCCccce-EE
Confidence 9999999999987321 1223456777610000 00000122232222 223378999999999999998887 99
Q ss_pred EEe--CCCCCC-----------CCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccc-eecEEEEEE
Q psy3823 259 WAF--NNSDTA-----------PRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQ-RTPCTFHVV 317 (365)
Q Consensus 259 W~~--~~~~~~-----------~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~ 317 (365)
|++ ++.... ....++.....+....|.|.+++.+|+|.|+|.|.|..+.. .....|.|.
T Consensus 169 W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 169 WYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 999 443220 01122333334556779999999999999999999864322 233455554
No 242
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.76 E-value=2.3e-18 Score=145.53 Aligned_cols=173 Identities=15% Similarity=0.228 Sum_probs=113.6
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCc-ceEEEEeCCCc-CC----------C--CCCceeEecCCeEEEEEEccCCCCCCeE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNSG-TA----------P--RPLTSYSIQDGSTSVARYTPTSELEYGT 84 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~-~~v~W~~~~~~-~l----------~--~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 84 (365)
+....+.+|++++|.|.+.+.+.. ..+.|+|++.. .+ . ...+...........|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 556778999999999997665433 26999997421 01 0 0111112223344589999999999999
Q ss_pred EEEEEEeCCCC---CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCC-CeeEEEeCCe
Q psy3823 85 LLCWARNEQGN---QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPY-KKLIWTHNGI 160 (365)
Q Consensus 85 Y~C~a~~~~~~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~~i~W~~~~~ 160 (365)
|+|.+.+..+. ....+.|.|.. .+..+|.+.+.+.. ....+|+.++|.|.+.+.+++ ..+.|++||.
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~-----~~~~~p~v~~~~~~----~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 176 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLG-----QPKAAPSVTLFPPS----SEELQANKATLVCLISDFFPGAVTVAWKADGA 176 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCC-----CCCCCCCCCEECCC----HHHHTTSCCCEEECCCBCSSCCCEEEEEETTE
T ss_pred EEEEEEcCCcceeEecCCEEEEEec-----CCCCCCcccccCCC----hhHhcCCceEEEEEEEEEcCCceEEEEEECCE
Confidence 99999988762 11344555511 11235655554322 233468899999999985443 4699999999
Q ss_pred EEeeCCC--------CceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 161 TISNNAS--------AGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 161 ~l~~~~~--------~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.+..... .+.......|.|.++..+|+|.|+|.|.|....
T Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 224 (234)
T 2j6e_L 177 PVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 224 (234)
T ss_dssp ECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBC
T ss_pred ECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCc
Confidence 8753210 001112346889999999999999999998764
No 243
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=1.9e-17 Score=142.02 Aligned_cols=163 Identities=14% Similarity=0.219 Sum_probs=109.4
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeE---Eee-C----------CCCceEEe------eceEEEeeecCC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GIT---ISN-N----------ASAGRIIT------NQTLVLQSVTRH 185 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~---l~~-~----------~~~~~~~~------~~~l~i~~~~~~ 185 (365)
..+.+|++|+|.|.+.+.| .+. +.|+++ +.. +.. . ...+.... ..+|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~g~p~~~~~-v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (257)
T 1f3r_B 10 GLVRPSETLSLTCTVSGFSLTSFS-VSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTD 88 (257)
T ss_dssp SEECTTSEEEEEEEEESSCTTTSC-CEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTT
T ss_pred ccccCCceEEEEEEEecccCCCcc-EEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcc
Confidence 3678999999999999875 455 999985 221 110 0 01122221 348999999999
Q ss_pred CCeEEEEEEEcCCCC--------CCcccEEEEEeeeeecccccCCCC---------------ceecCccceeeeecCceE
Q psy3823 186 SGGLYACSAINSQGE--------GGSTPFDLNINKMVNLIFNSIDEP---------------VCKQSQQRIYGALRNEQV 242 (365)
Q Consensus 186 d~G~Y~C~~~~~~~~--------~~s~~~~l~v~~~~~~~~~~~~~p---------------~~~~~~~~~~~~~~g~~~ 242 (365)
|+|.|.|.+.+..|. .......|.|. ..| .+... .....+.+|+.+
T Consensus 89 DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~----------~~~~~~~~~~~~~~~~~~~~~~~-p~~~~v~~G~~v 157 (257)
T 1f3r_B 89 DTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVS----------SGGGGSGGGGSGGGGSDIKLTQS-PSLLSASVGDRV 157 (257)
T ss_dssp CCEEEEEEEESSSSCCSSCCCEEEECCCEEEEEC----------SSCCSSCCSSSCCCCCEECSCEE-TSEECCCTTCCE
T ss_pred cCEEEEEEEcccccCccccccccccCCceEEEEE----------eCCccccccccCCCccceEEEcc-CCEEEEcCCCCE
Confidence 999999999988541 11234567776 332 11111 223347899999
Q ss_pred EEEEEEeeeCCCceeEEEe--CCCCCCC-----------CCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCC
Q psy3823 243 LVSCTVDANPQAQYFTWAF--NNSDTAP-----------RPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQ 305 (365)
Q Consensus 243 ~l~C~~~~~p~~~~~~W~~--~~~~~~~-----------~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~ 305 (365)
+|.|.+.+.|.+. +.|++ +|..... ...++....++....|.|.+++.+|+|.|.|.|.|..
T Consensus 158 ~L~C~~~~~~~~~-v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 158 TLSCKGSQNINNY-LAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp EEEEECSSCCBTC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred EEEEEECCcCCCc-EEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 9999999888887 99999 4432100 0122222223455679999999999999999999975
No 244
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.76 E-value=1.4e-17 Score=138.44 Aligned_cols=170 Identities=12% Similarity=0.136 Sum_probs=111.7
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCC---eE--EeeC-------CCCceEE----eeceEEEeeecCCCCeEEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNG---IT--ISNN-------ASAGRII----TNQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~---~~--l~~~-------~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+.+|++++|.|.+.+.|.+. +.|++.. .. +... ...+... .+.+|.|.+++..|+|.|.|.
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3r06_A 11 LPASLGDRVTINCQASQDISNY-LNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQ 89 (213)
T ss_dssp EEECTTCCEEEEEEESSCCTTC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred EEecCCCcEEEEEEeCCCcCce-EEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEEe
Confidence 4678999999999999887666 9999821 11 1110 0111211 134899999999999999999
Q ss_pred EEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeCCCCCCCCC-C
Q psy3823 194 AINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNSDTAPRP-L 271 (365)
Q Consensus 194 ~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~~-~ 271 (365)
+.+..+........|.|.. ...+|.+........ +..|+.++|.|.+.+.+++ ..+.|+++|....... .
T Consensus 90 ~~~~~~~~~~~~~~l~V~~-------~~~~p~v~~~~~~~~-~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 161 (213)
T 3r06_A 90 QYYNYPWTFGPGTKLEIKR-------ADAKPTVSIFPPSSE-QLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQ 161 (213)
T ss_dssp ECSSSSCEECCCEEEEECC-------CCBCCEEEEECCCHH-HHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEE
T ss_pred cccCCceEEcCCceEEEec-------cCCCceeeeeCCCce-ecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEe
Confidence 9987654444556677731 115565554332222 4568889999999987653 2499999986543221 1
Q ss_pred ceeE--eeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 272 TSYS--IQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 272 ~~~~--~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
.... ..++. .+.|.|.....+|+|.|+|.|.|.....
T Consensus 162 ~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 162 SVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred ccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 1111 12232 3467788888889999999999986543
No 245
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.76 E-value=6.2e-18 Score=136.87 Aligned_cols=151 Identities=9% Similarity=0.124 Sum_probs=107.5
Q ss_pred ceEEEEecCCcEEEEEEeC--CCCCcceEEEEe--CCCcCCC----------CCCceeEecCCeEEEEEEccCCCCCCeE
Q psy3823 19 QRIYGALRNEQVLVSCTVD--ANPQAQYFTWAF--NNSGTAP----------RPLTSYSIQDGSTSVARYTPTSELEYGT 84 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~--~~p~~~~v~W~~--~~~~~l~----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 84 (365)
...+.+.+|++++|.|... +.+.+ .|.|++ ++.. +. ...+.....++ +|.|.+++.+|+|.
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~-~i~W~k~~~~~~-i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~ 80 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDID-DIKWEKTSDKKK-IAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDI 80 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEE-EEEEEEGGGCCE-EEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCC-EEEEEECCCCcE-EEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEE
Confidence 3456678999999999532 34556 999999 8765 41 22222333555 79999999999999
Q ss_pred EEEEEEeCCCCCc--ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEE
Q psy3823 85 LLCWARNEQGNQR--TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITI 162 (365)
Q Consensus 85 Y~C~a~~~~~~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l 162 (365)
|+|.+.+..+... ..+.|.|... ..+|.+.. .+..+.|.|.+.+.|.+. +.|+++|..+
T Consensus 81 Y~c~~~n~~g~~~~~~~~~L~V~~~------~~~P~i~~------------~~~~v~L~C~~~~~p~~~-~~W~~~g~~l 141 (182)
T 1hnf_A 81 YKVSIYDTKGKNVLEKIFDLKIQER------VSKPKISW------------TCINTTLTCEVMNGTDPE-LNLYQDGKHL 141 (182)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEECC------CCCCEEEE------------ETTTTEEEEECSSCSSCE-EEEEESSCEE
T ss_pred EEEEEEeCCCceeEEEEEEEEEcCc------CCCCEEEE------------ccCcEEEEeEccCCCCCE-EEEEECCEEC
Confidence 9999999877653 5677888311 23454433 233689999999888666 9999999888
Q ss_pred eeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCC
Q psy3823 163 SNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGG 202 (365)
Q Consensus 163 ~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 202 (365)
.. ....+.+.. ..+|+|.|+|.|.|..+...
T Consensus 142 ~~--------~~~~i~~~~-~~~d~G~Y~C~a~N~~~~~~ 172 (182)
T 1hnf_A 142 KL--------SQRVITHKW-TTSLSAKFKCTAGNKVSKES 172 (182)
T ss_dssp EE--------ESSCEEEEC-CSCEEEEEEEEEECSSCEEE
T ss_pred CC--------CCcEEEEec-ccCCCcEEEEEEEeCCCCcE
Confidence 21 223344433 47899999999999998654
No 246
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.76 E-value=1.6e-17 Score=138.21 Aligned_cols=163 Identities=12% Similarity=0.164 Sum_probs=109.2
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeC--Ce---EEeeC-------CCCceEE-e---eceEEEeeecCCCCeEEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHN--GI---TISNN-------ASAGRII-T---NQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~--~~---~l~~~-------~~~~~~~-~---~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+.+|++++|.|.+.+.|.+. +.|+++ +. .+... ...+... . +.+|.|.+++..|+|.|+|.
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3nl4_L 11 VSEPVGGTVTIKCQASQSISSY-LAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYCQ 89 (213)
T ss_dssp EEEETTCCEEEEEEESSCCTTC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEcCCCCEEEEEEecCCCCce-EEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEEe
Confidence 4678999999999999887776 999983 21 11110 0111221 1 34799999999999999999
Q ss_pred EEcCCCC--CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCCceeEEEeCCCCCCCCC
Q psy3823 194 AINSQGE--GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNNSDTAPRP 270 (365)
Q Consensus 194 ~~~~~~~--~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~W~~~~~~~~~~~ 270 (365)
+.+..+. .......|.|.. ...+|.+....... .+..|+.++|.|.+.+ .|.+. +.|+++|.......
T Consensus 90 ~~~~~~~~~~~~~~~~l~V~~-------~~~~p~v~~~~~~~-~~~~g~~v~l~C~~~g~~P~~~-v~W~k~g~~~~~~~ 160 (213)
T 3nl4_L 90 STYENPTYVSFGGGTEVGVKG-------DPVAPTVLIFPPSA-DLVATGTVTIVCVANKYFPDVT-VTWEVDGTTQTTGI 160 (213)
T ss_dssp ECCSSTTTCEECCCEEEEEEC-------CCBCCEEEEECCCH-HHHTTSEEEEEEEEEEEBSCCE-EEEEETTEECCSSE
T ss_pred cCCCCceeEEeCCCeEEEEeC-------CCcCCeEEEeCCch-hhccCCcEeEEEEEecccCCcE-EEEEeCCccCCCCe
Confidence 9987764 333455677651 11455554322221 2567999999999998 88787 99999886543211
Q ss_pred -Ccee--EeeCCC---EEEEEEcCCCcccCeEEEEEEE
Q psy3823 271 -LTSY--SIQDGS---TSVARYTPTSELEYGTLLCWAR 302 (365)
Q Consensus 271 -~~~~--~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~ 302 (365)
.... ...++. .+.|.|.++..+|+|.|+|.|.
T Consensus 161 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 161 ENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 0000 011222 2569999999999999999999
No 247
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.76 E-value=1.2e-16 Score=131.13 Aligned_cols=164 Identities=14% Similarity=0.143 Sum_probs=116.1
Q ss_pred CeEeeCCceEEEEecCCcEEEEEEeCCCCCcc-eEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEE
Q psy3823 12 PVCKQSQQRIYGALRNEQVLVSCTVDANPQAQ-YFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR 90 (365)
Q Consensus 12 p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~-~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 90 (365)
|.........+.+.+|++++|.|.+ +.|.+. .+.|++.+.. +. .... ......|.|.+++.+|+|.|.|.|.
T Consensus 7 ~~~V~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~-l~---~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~ 79 (210)
T 1gsm_A 7 PLQVEPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTS-LG---AVQS--DTGRSVLTVRNASLSAAGTRVCVGS 79 (210)
T ss_dssp SEEEESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTT-TC---CEEE--ESSEEEEEECSCCGGGCEEEEEEEE
T ss_pred CEEEeCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeecccc-cC---cEEe--cCCccEEEECccCcccCceEEEEEE
Confidence 4444433344788999999999998 776654 8999997766 51 1111 2334589999999999999999999
Q ss_pred eCCCCCcccEEEEEEeccccCCCCCCCeEE-EEcCCccCccceecCCcEEEEEEEEec-CCC---CeeEEEeCCeEEeeC
Q psy3823 91 NEQGNQRTPCTFHVVKAGECEHPVDKPSVQ-IKLGRNLNASVLNEGVDIYFDCHIQAN-PPY---KKLIWTHNGITISNN 165 (365)
Q Consensus 91 ~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~---~~i~W~~~~~~l~~~ 165 (365)
+..+.....+.|+| +.+|... +.+ ..+.+|+.+ |.|.+.+. |.+ ..|.|++|+.+|...
T Consensus 80 n~~~~~~~~~~ltV---------~~~P~~~~i~~------~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~ 143 (210)
T 1gsm_A 80 CGGRTFQHTVQLLV---------YAFPNQLTVSP------AALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGA 143 (210)
T ss_dssp ETTEEEEEEEEEEE---------EBCCSEEEEES------SSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTC
T ss_pred eCCCceEEEEEEEE---------EecCCCcEEcc------ceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccc
Confidence 98877668899999 6777533 332 146678888 99999985 543 249999999998432
Q ss_pred CCCc----------------eEEeeceEEEeeecCCCCeEEEEEEEcCC
Q psy3823 166 ASAG----------------RIITNQTLVLQSVTRHSGGLYACSAINSQ 198 (365)
Q Consensus 166 ~~~~----------------~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 198 (365)
.... .....+++.+.....++.+.|+|+|.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L 192 (210)
T 1gsm_A 144 QALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRL 192 (210)
T ss_dssp EECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEE
T ss_pred cccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeC
Confidence 1000 11113345555777788899999999775
No 248
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.76 E-value=1.9e-17 Score=144.45 Aligned_cols=165 Identities=15% Similarity=0.208 Sum_probs=115.6
Q ss_pred EEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc-ccE
Q psy3823 22 YGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQR-TPC 100 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~-~~~ 100 (365)
..+.+|+.+.|.|.+. .|.+ .++|++++.. ..... ....... .+ ...|+|.|+|.|.+..+... ..+
T Consensus 105 ~~v~~G~~v~l~C~~~-~p~~-~v~w~~~~~~-~~~~~--~~~~~~~--~~-----~~~d~G~Y~C~a~n~~~~~~s~~~ 172 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT-DPQL-VVTLHEKKGD-VALPV--PYDHQRG--FS-----GIFEDRSYICKTTIGDREVDSDAY 172 (289)
T ss_dssp EEESSCCCEEECCCBS-CTTS-CEEEEESSCC-SCCCC--CEETTTE--EE-----ECCCSSEEEEEEEETTEEEECCCE
T ss_pred EEeecCCeEEEEeEcC-CCCc-eEEEEeCCCC-Cccce--eecCCcC--ee-----eeccCcEEEEEEEeCCceeeeeeE
Confidence 6688999999999976 6888 8999987633 22211 1111111 11 25699999999997666544 556
Q ss_pred EEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCce-------EEe
Q psy3823 101 TFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGR-------IIT 173 (365)
Q Consensus 101 ~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~-------~~~ 173 (365)
.|.|.. ..+|.+.+.+.. ..+.+|+.+.|.|.+.+.|.+. +.|++++........... ...
T Consensus 173 ~l~v~~-------~~~p~i~~~~~~----~~v~~G~~v~L~C~~~g~p~p~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (289)
T 3mjg_X 173 YVYRLQ-------VSSINVSVNAVQ----TVVRQGENITLMCIVIGNEVVN-FEWTYPRKESGRLVEPVTDFLLDMPYHI 240 (289)
T ss_dssp EEEECC-------CCCCCCEEEESC----SEEETTSCEEEEEEEESCSSBE-EEEECTTSSSSCCCCCEEEESCTTTTEE
T ss_pred EEEecC-------CCCCCcEEeCCc----ceeEcCCCEEEEEEECCCCCcc-eEEEcCCccCCCcccccccccCCcceEE
Confidence 777721 136666665532 4688999999999999988776 999987654322111111 123
Q ss_pred eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 174 NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 174 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
..+|.|.++..+|+|.|+|.|.|..|... ..+.|+|.
T Consensus 241 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~-~~~~l~v~ 277 (289)
T 3mjg_X 241 RSILHIPSAELEDSGTYTCNVTESVNDHQ-DEKAINIT 277 (289)
T ss_dssp EEEEEESSCCSSCCEEEEEEEEETTTTEE-EEEEEEEE
T ss_pred EEEEEEcccChhhCcEEEEEeecCCCCce-eEEEEEEE
Confidence 46899999999999999999999999766 67777777
No 249
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.76 E-value=4.3e-18 Score=139.57 Aligned_cols=155 Identities=11% Similarity=0.134 Sum_probs=105.4
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeC---CC-------------CceE-EeeceEEEeeecCCCCeEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNN---AS-------------AGRI-ITNQTLVLQSVTRHSGGLYAC 192 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~---~~-------------~~~~-~~~~~l~i~~~~~~d~G~Y~C 192 (365)
..+.+|++|+|.|.+.+.++...+.|++++..+... .. .+.. ..+.+|.|.+++..|+|.|.|
T Consensus 8 v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~C 87 (193)
T 2if7_A 8 VNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRA 87 (193)
T ss_dssp EEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEEEEE
T ss_pred EEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCceEEE
Confidence 357799999999998753333349999998765311 00 0111 135789999999999999999
Q ss_pred EEEcCCCCCCcccEEEEEeeeeecccccCCCCc---eecCccceeeeecCc-eEEEEEEEeee-CCCceeEEEeCCCCCC
Q psy3823 193 SAINSQGEGGSTPFDLNINKMVNLIFNSIDEPV---CKQSQQRIYGALRNE-QVLVSCTVDAN-PQAQYFTWAFNNSDTA 267 (365)
Q Consensus 193 ~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~---~~~~~~~~~~~~~g~-~~~l~C~~~~~-p~~~~~~W~~~~~~~~ 267 (365)
.+.+..+... ..+.|.|. .+|. +.... . ....|. .++|.|.+.+. |.+. +.|+++|...
T Consensus 88 ~~~~~~~~~~-~~~~L~V~----------~~~~~p~i~~~~-~--~~~~g~~~v~L~C~~~g~~p~p~-i~W~~~g~~l- 151 (193)
T 2if7_A 88 QISTKTSAKL-SSYTLRIL----------RQLRNIQVTNHS-Q--LFQNMTCELHLTCSVEDADDNVS-FRWEALGNTL- 151 (193)
T ss_dssp EEECSSCEEE-EEEEEEEE----------CCCEEEEEEECC-C-----CSSEEEEEEEEEESCCTTCE-EEEEETTEEE-
T ss_pred EEEecCCCeE-EEEEEEEE----------ccCCCCeEecCc-e--eecCCCceEEEEEEEecCCCceE-EEEEeCCEEc-
Confidence 9998877544 46778887 4432 22211 1 133455 89999999985 4676 9999987521
Q ss_pred CCCCceeEeeCCCEEEEEEcCCCcc-cCeEEEEEEEcCCccceec
Q psy3823 268 PRPLTSYSIQDGSTSVARYTPTSEL-EYGTLLCWARNEQGSQRTP 311 (365)
Q Consensus 268 ~~~~~~~~~~~~~~s~l~i~~v~~~-d~G~Y~C~a~n~~g~~~~~ 311 (365)
..+. .|.|.....+ |+|.|+|.|.|..|..+.+
T Consensus 152 ---------~~~~--~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 152 ---------SSQP--NLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp ---------ESSS--EEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred ---------CCCC--eEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 1222 3666544444 8999999999999988654
No 250
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.76 E-value=4.6e-17 Score=139.30 Aligned_cols=187 Identities=14% Similarity=0.147 Sum_probs=115.5
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEe--CCeEEee---------------CCCCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTH--NGITISN---------------NASAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~--~~~~l~~---------------~~~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++|+|.|.+.+.+ .+. +.|++ .+..+.. ....+.... ..+|.|.+++.
T Consensus 11 ~~v~~G~~v~L~C~~~g~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 89 (253)
T 3uzq_A 11 ELVKPGASVRLSCTASGFNIKDTY-MSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTS 89 (253)
T ss_dssp EEECTTCCEEEEEEECSSCGGGSC-EEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred eeecCCCcEEEEEEeeCCcccCce-EEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCc
Confidence 4678999999999998743 455 99998 2221110 001112221 22499999999
Q ss_pred CCCeEEEEEEEcCCCCCCcccEEEEEeeeeec-----ccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC----c
Q psy3823 185 HSGGLYACSAINSQGEGGSTPFDLNINKMVNL-----IFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA----Q 255 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~-----~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~----~ 255 (365)
+|+|.|.|.+.+..+........|.|...... .......|.+...+.. ..+.+|+.++|.|.+.+.|.+ .
T Consensus 90 ~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~~~ 168 (253)
T 3uzq_A 90 GDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPAS-LAVSLGQRATISCRASENVDRYGNSF 168 (253)
T ss_dssp GGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSE-EEECTTSCEEEEEEESSCCEETTEEC
T ss_pred ccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCe-EEEeCCCCEEEEEEecCccccCCCcE
Confidence 99999999999866544334566777610000 0000012333333322 338899999999999988776 6
Q ss_pred eeEEEeCCCCCCCC-------------CCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccc-eecEEEEEEcC
Q psy3823 256 YFTWAFNNSDTAPR-------------PLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQ-RTPCTFHVVKA 319 (365)
Q Consensus 256 ~~~W~~~~~~~~~~-------------~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 319 (365)
+.|++++...... ..+......+....|.|.+++.+|+|.|.|.|.|..+.. ..-..|.|...
T Consensus 169 -v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~ 245 (253)
T 3uzq_A 169 -MHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRP 245 (253)
T ss_dssp -EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred -EEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCC
Confidence 9999853211111 122222334556679999999999999999999976432 23345555433
No 251
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=1.6e-16 Score=134.69 Aligned_cols=170 Identities=15% Similarity=0.249 Sum_probs=110.9
Q ss_pred ceEEEEecCCcEEEEEEeCCCC----CcceEEEEeCCCcC-CC------------CCCceeEecCCeEEEEEEccCCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP----QAQYFTWAFNNSGT-AP------------RPLTSYSIQDGSTSVARYTPTSELE 81 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p----~~~~v~W~~~~~~~-l~------------~~~~~~~~~~~~~~~l~i~~~~~~d 81 (365)
+....+.+|+.++|.|.+.+.| .+ .+.|+|+.... +. ...+......+...+|.|.+++.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~-~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (240)
T 1moe_A 8 PASLAVSLGQRATMSCRAGESVDIFGVG-FLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADD 86 (240)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEE-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEecCCCCEEEEEeCCCccccCCCc-eEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhh
Confidence 4567789999999999988887 66 99999964210 10 0111112223344589999999999
Q ss_pred CeEEEEEEEeCCCC-CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCC-CeeEEEeC-
Q psy3823 82 YGTLLCWARNEQGN-QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPY-KKLIWTHN- 158 (365)
Q Consensus 82 ~G~Y~C~a~~~~~~-~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~~i~W~~~- 158 (365)
+|.|+|.+.+..+. ......|.|..... ..+|.+.+... ....+.+|++++|.|.+.+.|.+ ..+.|+++
T Consensus 87 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~----~~~~~~~~~~~---~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~ 159 (240)
T 1moe_A 87 VATYYCQQTNEDPYTFGGGTKLEIKGGGS----GGGGEVQLQQS---GAELVEPGASVKLSCTASGFNIKDTYMHWVKQR 159 (240)
T ss_dssp CEEEEEEECSSSSCCBCCCEEEEECCCSC----CCCCCCEEEEC---CCEEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEEEEEccCCceeecCCEEEEEecCCC----CCCceEEEeCC---CceEEeCCCcEEEEEEEcCccCCCCEEEEEEEC
Confidence 99999999987654 23567788732100 00222222222 23468899999999999987642 34999995
Q ss_pred -CeEEe----eC-----------CCCceEEe------eceEEEeeecCCCCeEEEEEEEc
Q psy3823 159 -GITIS----NN-----------ASAGRIIT------NQTLVLQSVTRHSGGLYACSAIN 196 (365)
Q Consensus 159 -~~~l~----~~-----------~~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~ 196 (365)
+..+. .. ...+.... ..+|.|.+++.+|+|.|+|.+.+
T Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 160 PEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp TTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 22211 00 01122221 24799999999999999999985
No 252
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.75 E-value=5e-17 Score=138.74 Aligned_cols=174 Identities=13% Similarity=0.203 Sum_probs=109.8
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-------------CCCCCceeEecCCeEEEEEEccCCCCCCe
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-------------APRPLTSYSIQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-------------l~~~~~~~~~~~~~~~~l~i~~~~~~d~G 83 (365)
..+..+.+.+|+.++|.|.+.+.|.+ .+.|+|+.... .................|.|.+++.+|+|
T Consensus 9 ~~p~~~~v~~G~~v~L~C~~~~~~~~-~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 87 (250)
T 3esu_F 9 QSTSSLSASLGDRVTISCRASQDIRN-YLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIG 87 (250)
T ss_dssp CSCSEEEECTTCCEEEEEEESSCCTT-CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred ecCCEEEeeCCCcEEEEEEecccCCc-eEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCE
Confidence 34566778999999999998888999 99999964210 00011112223334458999999999999
Q ss_pred EEEEEEEeCCCCCc-ccEEEEEEeccccC----------CCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecC--CC
Q psy3823 84 TLLCWARNEQGNQR-TPCTFHVVKAGECE----------HPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANP--PY 150 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~-~~~~l~V~~~~~~~----------~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p--~~ 150 (365)
.|.|.+.+..+... ....|.|....... ....++.....+ ....+.+|++++|.|.+.+.+ .+
T Consensus 88 ~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~G~~v~L~C~~~~~~~~~~ 163 (250)
T 3esu_F 88 TYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQS----GPELVKPGASVKISCKDSGYAFSSS 163 (250)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC------------------------CEEC----CCEEECTTCCEEEEEECCSTTGGGS
T ss_pred EEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecC----CceEEcCCceEEEEEEecCCcccCC
Confidence 99999988655432 44567772110000 000111112222 234678999999999998765 44
Q ss_pred CeeEEEeC--CeEEeeC---------------CCCceEEe------eceEEEeeecCCCCeEEEEEEEc
Q psy3823 151 KKLIWTHN--GITISNN---------------ASAGRIIT------NQTLVLQSVTRHSGGLYACSAIN 196 (365)
Q Consensus 151 ~~i~W~~~--~~~l~~~---------------~~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~ 196 (365)
. +.|+++ +..+... ...+.... ..+|.|.+++.+|+|.|.|.+.+
T Consensus 164 ~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 164 W-MNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp E-EEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred E-EEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 4 999986 4332110 00112221 22699999999999999999997
No 253
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.75 E-value=1.7e-17 Score=140.24 Aligned_cols=170 Identities=12% Similarity=0.145 Sum_probs=112.2
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCC--eE---Eee-------CCCCceEE----eeceEEEeeecCCCCeEEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNG--IT---ISN-------NASAGRII----TNQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~--~~---l~~-------~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+.+|++++|.|.+.+.+.+. +.|+++. .. +.. ....+... .+.+|.|.+++..|+|.|.|.
T Consensus 34 ~~v~~G~~v~L~C~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 112 (237)
T 3sob_L 34 LSASVGDRVTITCRASQDVSTA-VAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ 112 (237)
T ss_dssp EEEETTCCEEEEEEESSCCTTC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEeCCCcEEEEEecCCCCCce-EEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEe
Confidence 4678999999999999877666 9999832 11 110 00111111 245799999999999999999
Q ss_pred EEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCC--CceeEEEeCCCCCCCCC-
Q psy3823 194 AINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ--AQYFTWAFNNSDTAPRP- 270 (365)
Q Consensus 194 ~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~~W~~~~~~~~~~~- 270 (365)
+.+..+........+.|.. ...+|.+........ +..|+.++|.|.+.+.++ +. +.|+++|.......
T Consensus 113 ~~~~~~~~~~~~~~l~V~~-------~~~~p~v~~~~~~~~-~~~g~~v~l~C~~~~~~p~~~~-v~W~k~g~~~~~~~~ 183 (237)
T 3sob_L 113 QSYTTPPTFGQGTKVEIKR-------TVAAPSVFIFPPSDE-QLKSGTASVVCLLNNFYPREAK-VQWKVDNALQSGNSQ 183 (237)
T ss_dssp ECSSSSCEECCCEEEEEEC-------CCBCCEEEEECCCHH-HHHHTEEEEEEEEEEEBSSCCE-EEEEETTEECCSSEE
T ss_pred eccCCceEEcCcEEEEEec-------CCCCCceEEeCCChh-hccCCceEEEEEEcccCCCceE-EEEEECCCCCCCcee
Confidence 9887754333455677751 114555543222211 446888999999988543 65 99999887543211
Q ss_pred CceeE--eeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccce
Q psy3823 271 LTSYS--IQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQR 309 (365)
Q Consensus 271 ~~~~~--~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 309 (365)
..... ..++. .+.|.|..+..+|+|.|+|.|.|......
T Consensus 184 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 227 (237)
T 3sob_L 184 ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 227 (237)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred ecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCc
Confidence 11111 12232 35688999999999999999999876553
No 254
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.75 E-value=6.4e-17 Score=138.63 Aligned_cols=186 Identities=14% Similarity=0.223 Sum_probs=115.0
Q ss_pred ceecCCcEEEEEEEEecC--CCCeeEEEeC--CeEEee---------------CCCCceEEe------eceEEEeeecCC
Q psy3823 131 VLNEGVDIYFDCHIQANP--PYKKLIWTHN--GITISN---------------NASAGRIIT------NQTLVLQSVTRH 185 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~l~~---------------~~~~~~~~~------~~~l~i~~~~~~ 185 (365)
.+.+|++|+|.|.+.+.+ .+. +.|++. +..+.. ....+.... ..+|.|.+++..
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 91 (256)
T 3umt_A 13 LVKPGASVKISCKTSGYTFTEYT-MHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSE 91 (256)
T ss_dssp EECTTCCEEEEEEEESSCGGGSC-EEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEEecccccccE-EEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcc
Confidence 578999999999998755 455 999972 221110 001112211 234999999999
Q ss_pred CCeEEEEEEEcCCC---CCCcccEEEEEeeeee-----ccccc-CCCCceecCccceeeeecCceEEEEEEEeeeCCCce
Q psy3823 186 SGGLYACSAINSQG---EGGSTPFDLNINKMVN-----LIFNS-IDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQY 256 (365)
Q Consensus 186 d~G~Y~C~~~~~~~---~~~s~~~~l~v~~~~~-----~~~~~-~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~ 256 (365)
|+|.|.|.+.+..+ ........|.|..... ..... ..+|.+...+.. ..+.+|+.++|.|.+.+.|.+.
T Consensus 92 DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~v~~G~~v~L~C~~~~~~~~~- 169 (256)
T 3umt_A 92 DSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSS-LSASLGERVSITCRASQDIGSN- 169 (256)
T ss_dssp GCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSE-EEECTTCCEEEEEEESSCCTTC-
T ss_pred cCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCe-EEEECCCCEEEEEEEecCCCcE-
Confidence 99999999998722 1122446677761000 00000 013444433332 3388999999999999988887
Q ss_pred eEEEeCCCCCCC-------------CCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccc-eecEEEEEEcC
Q psy3823 257 FTWAFNNSDTAP-------------RPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQ-RTPCTFHVVKA 319 (365)
Q Consensus 257 ~~W~~~~~~~~~-------------~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 319 (365)
+.|++.+..... ...+......+....|.|.+++.+|+|.|.|.|.|..+.. .....|.|..+
T Consensus 170 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 170 LNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp EEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred EEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 999985321111 0122333344556779999999999999999999865432 23456666544
No 255
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.75 E-value=6.3e-17 Score=137.71 Aligned_cols=176 Identities=14% Similarity=0.131 Sum_probs=115.1
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-------------CC---CCCceeEecCCeEEEEEEccCCCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-------------AP---RPLTSYSIQDGSTSVARYTPTSELEY 82 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-------------l~---~~~~~~~~~~~~~~~l~i~~~~~~d~ 82 (365)
+..+.+.+|+.++|.|...+.|.+ .+.|+|..... .. ...............|.|.+++.+|+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 86 (245)
T 3nfj_J 8 PATLVQPVGSPLSLECTVEGTSNP-NLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDS 86 (245)
T ss_dssp CSEEEEETTCCEEEEEEEESCSSC-EEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGC
T ss_pred CceEEecCCCCEEEEEEecCCCCc-eEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhC
Confidence 456778999999999997777888 99999932110 00 01111111123455899999999999
Q ss_pred eEEEEEEEeCCC-----C-CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEE
Q psy3823 83 GTLLCWARNEQG-----N-QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIW 155 (365)
Q Consensus 83 G~Y~C~a~~~~~-----~-~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W 155 (365)
|.|+|.+.+..+ . ......|.|..... ...+|.+.+.... ...+.+|+.++|.|.+.+. |++..+.|
T Consensus 87 G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~---~~~~P~v~~~~~~---~~~~~~g~~~~l~C~~~g~~p~~~~v~W 160 (245)
T 3nfj_J 87 GFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLN---KVFPPEVAVFEPS---EAEISHTQKATLVCLATGFFPDHVELSW 160 (245)
T ss_dssp EEEEEEEECCTTTSSCCCEECCCEEEEEESCGG---GCBCCEEEEEECC---HHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred EEEEEEEeeccCCCceeEEECCCeEEEEEcccC---CCCCCceEeecCC---cccccCCCceEEEEEEccCcCCCEEEEE
Confidence 999999998332 1 11446777732100 1236666554332 2235569999999999984 44545899
Q ss_pred EeCCeEEeeCC-------------CCceEEeeceEEEeeecCCC-CeEEEEEEEcCCCCC
Q psy3823 156 THNGITISNNA-------------SAGRIITNQTLVLQSVTRHS-GGLYACSAINSQGEG 201 (365)
Q Consensus 156 ~~~~~~l~~~~-------------~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~~ 201 (365)
+++|..+.... ..+.......|.|.....+| .|.|+|.+.|.....
T Consensus 161 ~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 161 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp EETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 99999885321 11222223578888887777 779999999876543
No 256
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.75 E-value=8.4e-18 Score=144.99 Aligned_cols=173 Identities=15% Similarity=0.280 Sum_probs=116.1
Q ss_pred cceecCCcEEEEEEEE---ecCCCCeeEEEeCCeEEee-------CC---------CCceEE------eeceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQ---ANPPYKKLIWTHNGITISN-------NA---------SAGRII------TNQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~---~~p~~~~i~W~~~~~~l~~-------~~---------~~~~~~------~~~~l~i~~~~~ 184 (365)
..+.+|+++.|.|.+. +.+.+. +.|++++..... .. ..+... .+.+|.|.+++.
T Consensus 15 ~~v~~G~~v~L~C~~~~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 93 (268)
T 3mj6_A 15 LRVHVGESVLMGCVVQRTEEKHVDR-VDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQK 93 (268)
T ss_dssp EEEETTCCEEECCBCCCSSCCCEEE-EEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCG
T ss_pred eEEecCCcEEEEEEeecCCCCceEE-EEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCH
Confidence 4678999999999987 555544 999985431100 00 011222 136899999999
Q ss_pred CCCeEEEEEEEcCCCCC-CcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEE---eeeCCCceeEEE
Q psy3823 185 HSGGLYACSAINSQGEG-GSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTV---DANPQAQYFTWA 260 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~~-~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~---~~~p~~~~~~W~ 260 (365)
+|+|.|+|.+.+..+.. .+..+.|.|.. ..| ....+..|+.++|.|.+ .+.|.+. +.|+
T Consensus 94 ~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~---------~~p-------~~~~v~~G~~v~L~C~~~~~~~~p~~~-v~W~ 156 (268)
T 3mj6_A 94 ADEGIYTCEIRLKNESMVMKKPVELWVLP---------EEP-------RDLRVRVGDTTQMRCSIQSTEEKRVTK-VNWM 156 (268)
T ss_dssp GGCEEEEEEEEETTCCCEEEEEEEEEEEC---------CCC-------SEEEEETTCCEEECCBCEESSSSCCCE-EEEE
T ss_pred hHCEEEEEEEEecCCcceEEEEEEEEEec---------cCC-------CccccccCCcEEEEEEecCCCCCCccc-eEEE
Confidence 99999999999876543 23344555540 112 12338899999999999 4568887 9999
Q ss_pred eCCCCCCCCCC---------------------ceeEe--eCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 261 FNNSDTAPRPL---------------------TSYSI--QDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 261 ~~~~~~~~~~~---------------------~~~~~--~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
+++........ +..+. .......|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 236 (268)
T 3mj6_A 157 FSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVV 236 (268)
T ss_dssp EECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEE
Confidence 95432211100 00000 01224469999999999999999999999999999999886
Q ss_pred cCc
Q psy3823 318 KAG 320 (365)
Q Consensus 318 ~~~ 320 (365)
..+
T Consensus 237 ~~~ 239 (268)
T 3mj6_A 237 QDE 239 (268)
T ss_dssp CC-
T ss_pred cCC
Confidence 543
No 257
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.75 E-value=1e-16 Score=136.20 Aligned_cols=173 Identities=13% Similarity=0.143 Sum_probs=108.9
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-CC------------CCCceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-AP------------RPLTSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
+....+.+|++++|.|.+.+.|.+ .+.|+|+.... .. ...+...........|.|.+++.+|+|.|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 86 (242)
T 2znx_A 8 PATLSVTPGNSVSLSCRASQSIGN-NLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMY 86 (242)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCeEEEcCCCcEEEEEEeCCCCCc-eEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEE
Confidence 456778999999999998888888 99999964210 10 01111122233455899999999999999
Q ss_pred EEEEEeCCCCCc-ccEEEEEEeccccCC----CCCCCeEEEEcCCccCccceecCCcEEEEEEEEecC--CCCeeEEEeC
Q psy3823 86 LCWARNEQGNQR-TPCTFHVVKAGECEH----PVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANP--PYKKLIWTHN 158 (365)
Q Consensus 86 ~C~a~~~~~~~~-~~~~l~V~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~ 158 (365)
.|.+.+..+... ....|.|........ ...++.....+ ....+.+|++++|.|.+.+.+ .+. +.|+++
T Consensus 87 ~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~G~~v~L~C~~~g~~~~~~~-v~W~k~ 161 (242)
T 2znx_A 87 FCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQES----GPSLVKPSQTLSLTCSVTGDSITSDY-XSXIRK 161 (242)
T ss_dssp EEEECSSSSCEECCCEEEEEC---------------CCEEEEE----CCSEECTTSCEEEEEEEESSCGGGSC-EEEEEE
T ss_pred EEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecC----CcceecCCCeEEEEEEEEccccCCcc-eeeEee
Confidence 999998754321 456777721100000 00011122222 223578999999999999865 344 999984
Q ss_pred --CeEEe----e--C--------CCCceEEe------eceEEEeeecCCCCeEEEEEEEcC
Q psy3823 159 --GITIS----N--N--------ASAGRIIT------NQTLVLQSVTRHSGGLYACSAINS 197 (365)
Q Consensus 159 --~~~l~----~--~--------~~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~ 197 (365)
+..+. . . ...+.... ..+|.|.+++.+|+|.|.|.+.|.
T Consensus 162 ~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 162 FPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp CTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred CCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 33221 0 0 01122221 248999999999999999999874
No 258
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.75 E-value=1.4e-16 Score=138.15 Aligned_cols=188 Identities=9% Similarity=-0.013 Sum_probs=113.8
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCCe-----EEeeC-------CCCceEEe----eceEEEeeecCCCCeEEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNGI-----TISNN-------ASAGRIIT----NQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~-----~l~~~-------~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+.+|++++|.|.+.+.|.+. +.|++++. .+... ...+.... ..+|.|.+++..|+|.|.|.
T Consensus 22 ~~v~~G~~v~L~C~~~~~p~~~-i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 100 (276)
T 3auv_A 22 LSASVGDRVTITCRASQDVSTA-VAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ 100 (276)
T ss_dssp EECCTTCCEEEEEEESSCCTTC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEcCCCCEEEEeEcCCCCCCc-EEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEEE
Confidence 4688999999999999887766 99998531 22110 01122221 23899999999999999999
Q ss_pred EEcCCCCCCcccEEEEEeeeeecc---cccCCCCceecCccceeeeecCceEEEEEEEeeeC--CCceeEEEeCCCCCCC
Q psy3823 194 AINSQGEGGSTPFDLNINKMVNLI---FNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSDTAP 268 (365)
Q Consensus 194 ~~~~~~~~~s~~~~l~v~~~~~~~---~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~~W~~~~~~~~~ 268 (365)
+.|..+...+....|.|....... ......|.+.........+.+|+.++|.|.+.+.| .+. +.|++++.....
T Consensus 101 ~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~-v~W~k~~~g~~~ 179 (276)
T 3auv_A 101 QHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYW-IHWVRQAPGKCL 179 (276)
T ss_dssp ECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSE-EEEEEECTTCCE
T ss_pred EecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCE-EEEEEcCCCCCc
Confidence 998766434345667776110000 00000122211111223488999999999999876 365 999996421110
Q ss_pred ------------------CCCceeEee--CCCEEEEEEcCCCcccCeEEEEEEEcCC---cc--ceecEEEEEEcC
Q psy3823 269 ------------------RPLTSYSIQ--DGSTSVARYTPTSELEYGTLLCWARNEQ---GS--QRTPCTFHVVKA 319 (365)
Q Consensus 269 ------------------~~~~~~~~~--~~~~s~l~i~~v~~~d~G~Y~C~a~n~~---g~--~~~~~~l~v~~~ 319 (365)
...++.... ......|.|.+++.+|+|.|.|.|.|.. +. -.....|.|.+.
T Consensus 180 ~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~ 255 (276)
T 3auv_A 180 EWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSA 255 (276)
T ss_dssp EEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC--
T ss_pred EEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEEEEEccc
Confidence 111222222 2345579999999999999999999983 21 123345666544
No 259
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.75 E-value=1.4e-17 Score=139.52 Aligned_cols=172 Identities=12% Similarity=0.126 Sum_probs=113.2
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-CC-------C------------CCceeEe--cCCeEEEEEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-AP-------R------------PLTSYSI--QDGSTSVARY 74 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l~-------~------------~~~~~~~--~~~~~~~l~i 74 (365)
+....+.+|+.++|.|.+.+.| .+ .+.|+|+.... .. . ..+.... .......|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDY-YMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQM 85 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred CCceeEcCCCEEEEEEEecCccCCCC-cEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEE
Confidence 3445788999999999976655 55 99999864210 10 0 0111111 1123458999
Q ss_pred ccCCCCCCeEEEEEEEeCCC-----CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-C
Q psy3823 75 TPTSELEYGTLLCWARNEQG-----NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-P 148 (365)
Q Consensus 75 ~~~~~~d~G~Y~C~a~~~~~-----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p 148 (365)
.+++.+|+|.|.|.+.+..+ .......|.|.. .+..+|.+.+.... ..+.+|+.++|.|.+.|. |
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~P~i~~~~~~----~~~~~g~~v~L~C~~~g~~P 156 (222)
T 1q9r_B 86 NTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSA-----AKTTPPSVYPLAPG----SAAQTNSMVTLGCLVKGYFP 156 (222)
T ss_dssp CSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECS-----SCCBCCEEEEECCC----SCCCCSSEEEEEEEEEEEBS
T ss_pred CcCCcccCeEEEEEEeccCCcccceEeCCceEEEecc-----CCCCCCeEEEcccc----ccccCCCcEEEEEEEccEEC
Confidence 99999999999999998654 112456777731 01235666554322 235689999999999985 7
Q ss_pred CCCeeEEEeCCeEEeeCC-----CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCC
Q psy3823 149 PYKKLIWTHNGITISNNA-----SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEG 201 (365)
Q Consensus 149 ~~~~i~W~~~~~~l~~~~-----~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 201 (365)
.+..+.|+++|..+.... ..+.....+.|.|.++...| |.|+|.|.|..+..
T Consensus 157 ~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~ 213 (222)
T 1q9r_B 157 EPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASST 213 (222)
T ss_dssp SCCEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred CCCEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCC
Confidence 763599999886542210 01111223578898888889 99999999988743
No 260
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.75 E-value=1.4e-17 Score=142.10 Aligned_cols=172 Identities=16% Similarity=0.273 Sum_probs=110.0
Q ss_pred ceecCCcEEEEEEEEecCCCC----eeEEEeCCeEEe------e---------CCCCceE-----EeeceEEEeeecCCC
Q psy3823 131 VLNEGVDIYFDCHIQANPPYK----KLIWTHNGITIS------N---------NASAGRI-----ITNQTLVLQSVTRHS 186 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~p~~~----~i~W~~~~~~l~------~---------~~~~~~~-----~~~~~l~i~~~~~~d 186 (365)
.+.+|++++|.|.+.+.|.+. .+.|++++.... . ....... ..+.+|.|.+++..|
T Consensus 14 ~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D 93 (248)
T 3pv7_A 14 ITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEE 93 (248)
T ss_dssp EEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGG
T ss_pred EEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHH
Confidence 577999999999999876654 599998532110 0 0000000 013459999999999
Q ss_pred CeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCC-ceeEEEeCCC
Q psy3823 187 GGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQA-QYFTWAFNNS 264 (365)
Q Consensus 187 ~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~~W~~~~~ 264 (365)
+|.|+|.+.+..+... ..+.|.|. .+|.+....... +..|+.+.|.|.+.+ .|.+ . +.|+++|.
T Consensus 94 ~G~Y~C~~~~~~~~~~-~~~~L~V~----------~~P~v~~~~~~~--~~~~~~~~L~C~~~g~~P~pi~-v~W~k~g~ 159 (248)
T 3pv7_A 94 AGEYRCEVVVTPLKAQ-GTVQLEVV----------ASPASRLLLDQV--GMKENEDKYMCESSGFYPEAIN-ITWEKQTQ 159 (248)
T ss_dssp CEEEEEEEEETTEEEE-EEEEEEEE----------BCCEEEEECC----------CEEEEEEEEEBSSCCE-EEEEEECS
T ss_pred CeEEEEEEEeCCccce-eEEEEEEe----------cCCceEEecCCc--cccCCCcEEEEEEccEECCCeE-EEEEECCc
Confidence 9999999998776443 56788888 777765433321 456788889999998 7888 6 99999986
Q ss_pred CCCCCC----C----ceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccc--eecEEEEE
Q psy3823 265 DTAPRP----L----TSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQ--RTPCTFHV 316 (365)
Q Consensus 265 ~~~~~~----~----~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~--~~~~~l~v 316 (365)
...... . ......++. .+.|.|.....+|.|.|+|.|.|..+.. +..+.|.|
T Consensus 160 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 160 KFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp SSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred cCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 432110 0 011122232 3568888999999999999999999874 44555555
No 261
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.75 E-value=5.8e-18 Score=140.39 Aligned_cols=166 Identities=16% Similarity=0.146 Sum_probs=107.9
Q ss_pred EecCCcEEEEEEeCCCC---CcceEEEEeCCCcCCCCCCce--eEecCC---eEEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy3823 24 ALRNEQVLVSCTVDANP---QAQYFTWAFNNSGTAPRPLTS--YSIQDG---STSVARYTPTSELEYGTLLCWARNEQGN 95 (365)
Q Consensus 24 v~~G~~~~l~C~~~~~p---~~~~v~W~~~~~~~l~~~~~~--~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~~ 95 (365)
+.+|++++|.|.+.+.| ....+.|+|++.. +...... ....++ ....|.|.+++.+|+|.|+|.|.+..+.
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~ 93 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVE-VHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 93 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEE-ECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCcc-ccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCC
Confidence 67899999999966663 3238999999976 4422110 001111 2347999999999999999999998775
Q ss_pred CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEEeCCeEEeeCCCCc-eEEe
Q psy3823 96 QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWTHNGITISNNASAG-RIIT 173 (365)
Q Consensus 96 ~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~~~~l~~~~~~~-~~~~ 173 (365)
......+.+. .....+|.+.+.+... ...+|+.+.|.|.+.|. |++..+.|++||..+....... ....
T Consensus 94 ~~~~~~v~~~-----~~~~~~P~v~~~~~~~----~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~ 164 (207)
T 2vol_A 94 APIEKTISKT-----KGRPKAPQVYTLPPPK----EQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDT 164 (207)
T ss_dssp SCEEEEECCC-----CCCCBCCEEEEECCCT----GGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECT
T ss_pred CceEEEeccC-----CCCCcCCeEEEeCCCH----HHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECC
Confidence 4322222110 0014578777665431 23369999999999985 4444699999999874321111 1111
Q ss_pred ------eceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 174 ------NQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 174 ------~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
...|.+.....+|.|.|+|.|.|...
T Consensus 165 ~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 165 DGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp TSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred CCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 23456666666789999999999865
No 262
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.75 E-value=2e-18 Score=145.42 Aligned_cols=175 Identities=15% Similarity=0.256 Sum_probs=116.1
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCCeE-----Eee----CC--CCce-----------EEeeceEEEeeecCCCC
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNGIT-----ISN----NA--SAGR-----------IITNQTLVLQSVTRHSG 187 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~-----l~~----~~--~~~~-----------~~~~~~l~i~~~~~~d~ 187 (365)
..+.+|+++.|.|.+.+.+.+..+.|++++.. +.. .. ..+. ...++.|.|.+++..|+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~~D~ 89 (231)
T 2pet_A 10 VEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVGDE 89 (231)
T ss_dssp EEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCGGGC
T ss_pred EEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCcccC
Confidence 35789999999999988775234999974332 210 00 0011 22245699999999999
Q ss_pred eEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCC---ceecCccceeeeecCceE-EEEEEE-eeeCCCceeEEEeC
Q psy3823 188 GLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEP---VCKQSQQRIYGALRNEQV-LVSCTV-DANPQAQYFTWAFN 262 (365)
Q Consensus 188 G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p---~~~~~~~~~~~~~~g~~~-~l~C~~-~~~p~~~~~~W~~~ 262 (365)
|.|+|.+.+..+...+..+.|.|. .+| .+...... ..+..|+.+ .|.|.+ .+.|.+. +.|+++
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~l~V~----------~~p~~~~~~~~~~~-~~~~~g~~~~~l~C~~~~~~p~p~-i~W~~~ 157 (231)
T 2pet_A 90 RDYVCVVRAGAAGTAEATARLNVF----------AKPEATEVSPNKGT-LSVMEDSAQEIATCNSRNGNPAPK-ITWYRN 157 (231)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEEE----------BCCCCCEEEECCSS-CCTTCCSEEEEEEEEEEEEBSCCE-EEEEET
T ss_pred ceEEEEEEecCCCceEEEEEEEEE----------ecCCCcEEecCCcc-eeecCCCceEEEEEEeECcccCCE-EEEEEC
Confidence 999999998873333467788887 443 33333322 226688887 999999 8899998 999999
Q ss_pred CCCCCCCC---CceeEe------eCCC---EEEEEEcCCCcccCeEEEEEEEc-----CCcc-ceecEEEEE
Q psy3823 263 NSDTAPRP---LTSYSI------QDGS---TSVARYTPTSELEYGTLLCWARN-----EQGS-QRTPCTFHV 316 (365)
Q Consensus 263 ~~~~~~~~---~~~~~~------~~~~---~s~l~i~~v~~~d~G~Y~C~a~n-----~~g~-~~~~~~l~v 316 (365)
|....... ....+. .++. .+.|.|.....+|.|.|+|.|.| ..|. .+..+.|.|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 158 GQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp TEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred CccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 87554433 122221 1111 25688876666679999999999 4555 555555544
No 263
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.75 E-value=2.7e-17 Score=139.26 Aligned_cols=173 Identities=13% Similarity=0.165 Sum_probs=107.2
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-C---------------CCCCceeEe-cCCeEEEEEEccCCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-A---------------PRPLTSYSI-QDGSTSVARYTPTSELE 81 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l---------------~~~~~~~~~-~~~~~~~l~i~~~~~~d 81 (365)
+..+.+.+|++++|.|. .+.|.+ .+.|+|+.... + ....+.... ......+|.|.+++.+|
T Consensus 7 p~~~~v~~G~~v~L~C~-~~~~~~-~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 84 (238)
T 2p1y_A 7 PRNKVAVTGGKVTLSCN-QTNNHN-NMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQ 84 (238)
T ss_dssp CSEEEEETTCCEEEEEE-ECSCCS-EEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGG
T ss_pred ccceEEeCCCEEEEEee-cCCCCc-cEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCccc
Confidence 45677899999999999 567888 99999962110 0 001111111 12234479999999999
Q ss_pred CeEEEEEEEeCCCCCc-----ccEEEEEEeccccCCC---CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCee
Q psy3823 82 YGTLLCWARNEQGNQR-----TPCTFHVVKAGECEHP---VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKL 153 (365)
Q Consensus 82 ~G~Y~C~a~~~~~~~~-----~~~~l~V~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i 153 (365)
+|.|+|.+.+..+... ....|.|........| ...+.+...+ ....+.+|++++|.|.+.+.|.+. +
T Consensus 85 sG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p----~~~~v~~G~~v~L~C~~~~~p~~~-i 159 (238)
T 2p1y_A 85 TSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSP----QSLTVWEGETAILNCSYENSAFDY-F 159 (238)
T ss_dssp CEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEEC----SEEEEETTSCEEEEEECCCTTCCE-E
T ss_pred CeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccC----ceEEEeCCCeEEEEEEEecCCCCc-E
Confidence 9999999998755211 3456777311000000 0001333333 234688999999999999888776 9
Q ss_pred EEEeCC--e---EEee-C------CCCceEEe------eceEEEeeecCCCCeEEEEEEEcCC
Q psy3823 154 IWTHNG--I---TISN-N------ASAGRIIT------NQTLVLQSVTRHSGGLYACSAINSQ 198 (365)
Q Consensus 154 ~W~~~~--~---~l~~-~------~~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~~ 198 (365)
.|++++ . .+.. . ...+.... ..+|.|.+++.+|+|.|+|.+.|..
T Consensus 160 ~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 160 PWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 999853 1 1110 0 00112211 3589999999999999999999873
No 264
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.75 E-value=4.4e-18 Score=142.34 Aligned_cols=166 Identities=16% Similarity=0.170 Sum_probs=107.6
Q ss_pred EecCCcEEEEEEeCCC---CC-cceEEEEeCCCcCCCCCCceeE-e-cCC---eEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 24 ALRNEQVLVSCTVDAN---PQ-AQYFTWAFNNSGTAPRPLTSYS-I-QDG---STSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 24 v~~G~~~~l~C~~~~~---p~-~~~v~W~~~~~~~l~~~~~~~~-~-~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
+.+|++++|.|.+.+. |. + .++|+|++.. +........ . .++ ..+.|.|.+++.+|+|.|+|.|.+..+
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~-~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~ 100 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDV-QISWFVNNVE-VHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDL 100 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCE-EEEEEETTEE-ECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTC
T ss_pred hccCCCeeEEEEEcCCccCCCce-EEEEEECCcc-ccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcC
Confidence 6789999999996555 34 5 9999999976 543221111 1 111 234799999999999999999999866
Q ss_pred CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeCCeEEeeCCCCce-EE
Q psy3823 95 NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHNGITISNNASAGR-II 172 (365)
Q Consensus 95 ~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~~~~l~~~~~~~~-~~ 172 (365)
.......+.. .. ....+|.+.+.+... ...+|+.++|.|.+.| +|.+..+.|++||..+........ ..
T Consensus 101 ~~~~~~~v~~-~~----~~~~~P~v~~~~~~~----~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~ 171 (218)
T 2rgs_A 101 PSPIERTISK-IK----GLVRAPQVYILPPPA----EQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLD 171 (218)
T ss_dssp SSCEEEEECC-CC----CCCBCCEEEEECCCG----GGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEEC
T ss_pred CCcceEEEee-cC----CCCCCCEEEEECCCh----HHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEEC
Confidence 4421112110 00 014578777655331 2236999999999998 566546999999998743211111 11
Q ss_pred ee------ceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 173 TN------QTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 173 ~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.+ ..|.+.....+|.|.|+|.|.|....
T Consensus 172 ~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 172 SDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp TTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred CCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 12 33555555556799999999997653
No 265
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.75 E-value=2.3e-18 Score=144.24 Aligned_cols=176 Identities=19% Similarity=0.262 Sum_probs=118.4
Q ss_pred cceecCCcEEEEEEEEe-cCCCC---eeEEEeCCeEEee-------------CCCCceEE-------eeceEEEeeecCC
Q psy3823 130 SVLNEGVDIYFDCHIQA-NPPYK---KLIWTHNGITISN-------------NASAGRII-------TNQTLVLQSVTRH 185 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~-~p~~~---~i~W~~~~~~l~~-------------~~~~~~~~-------~~~~l~i~~~~~~ 185 (365)
..+.+|+++.|.|.+.+ .+.+. .+.|++++..... ..+..... .+.+|.|.+++..
T Consensus 9 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~ 88 (221)
T 3eow_R 9 VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVE 88 (221)
T ss_dssp CCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCC
T ss_pred EEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChH
Confidence 35778999999999854 33222 4999998642210 01111111 2568999999999
Q ss_pred CCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceE-EEEEEEe-eeCCCceeEEEeCC
Q psy3823 186 SGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQV-LVSCTVD-ANPQAQYFTWAFNN 263 (365)
Q Consensus 186 d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-~l~C~~~-~~p~~~~~~W~~~~ 263 (365)
|+|.|+|.+.+......+..+.|.|. .+|.+....... ...|+.+ .|.|.+. +.|.|. +.|++++
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~L~V~----------~~P~~~~~~~~~--~~~g~~~~~l~C~~~~g~P~p~-v~W~k~~ 155 (221)
T 3eow_R 89 DEGSYTCLFVTFPQGSRSVDIWLRVL----------AKPQNTAEVQKV--QLTGEPVPMARCVSTGGRPPAQ-ITWHSDL 155 (221)
T ss_dssp CCSCBEEEEEESSSCSCEEECCCCCC----------CCCEEEEEEECC--CCCSSSCCEEEEEEESCSSCCC-EEEECSS
T ss_pred HCeEEEEEEEeCCCCceEEEEEEEEE----------ECCCceeecCCc--ccCCceEEEEEEECCCccCCCe-eEEEeCC
Confidence 99999999998763333456677777 777765433222 2567888 5999987 789997 9999875
Q ss_pred CCCCCCCCceeEeeCC---CEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 264 SDTAPRPLTSYSIQDG---STSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 264 ~~~~~~~~~~~~~~~~---~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
....... ......++ ..+.|.|.++..+|.|.|+|.|.|..+.....+.|...+.
T Consensus 156 ~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~~~~ 213 (221)
T 3eow_R 156 GGMPQTS-QVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSLTVY 213 (221)
T ss_dssp SCCCCCE-EECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECCCCC
T ss_pred CCCCccc-eeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEEEEE
Confidence 5332211 10111122 3467999999999999999999999988766555554443
No 266
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.74 E-value=3.3e-18 Score=143.26 Aligned_cols=173 Identities=15% Similarity=0.235 Sum_probs=117.1
Q ss_pred eEEEEecCCcEEEEEEe-CCCCCc---ceEEEEeCCCcCCCC-------------CCceeEec-----CCeEEEEEEccC
Q psy3823 20 RIYGALRNEQVLVSCTV-DANPQA---QYFTWAFNNSGTAPR-------------PLTSYSIQ-----DGSTSVARYTPT 77 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~-~~~p~~---~~v~W~~~~~~~l~~-------------~~~~~~~~-----~~~~~~l~i~~~ 77 (365)
..+.+.+|++++|.|.. .+.+.+ ..+.|+|++.. ... ..+..... .....+|.|.++
T Consensus 7 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 7 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGES-GSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSC-SSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCC-ceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 34567899999999996 334444 15999999753 211 11111111 112348999999
Q ss_pred CCCCCeEEEEEEEeCC-CCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcE-EEEEEEE-ecCCCCeeE
Q psy3823 78 SELEYGTLLCWARNEQ-GNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDI-YFDCHIQ-ANPPYKKLI 154 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~-~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v-~l~C~~~-~~p~~~~i~ 154 (365)
+.+|+|.|+|.+.+.. +.....+.|.| ..+|.+.+.+.. ...+|+.+ .|.|.+. +.|.+. +.
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V---------~~~P~~~~~~~~-----~~~~g~~~~~l~C~~~~g~P~p~-v~ 150 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRV---------LAKPQNTAEVQK-----VQLTGEPVPMARCVSTGGRPPAQ-IT 150 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCC---------CCCCEEEEEEEC-----CCCCSSSCCEEEEEEESCSSCCC-EE
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEE---------EECCCceeecCC-----cccCCceEEEEEEECCCccCCCe-eE
Confidence 9999999999999866 55557777877 668877654432 12678888 4999988 778776 99
Q ss_pred EEeCCeEEee-----CCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 155 WTHNGITISN-----NASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 155 W~~~~~~l~~-----~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
|++++..... ....+.....+.|.|.+...+|+|.|+|.|.|..+.. .+.+.|.
T Consensus 151 W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~---~~~~~v~ 209 (221)
T 3eow_R 151 WHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEK---PQLLTVS 209 (221)
T ss_dssp EECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSS---CEEEEEC
T ss_pred EEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCC---CeEEEEE
Confidence 9986432211 0111112224579999999999999999999987643 3556666
No 267
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.74 E-value=1.5e-17 Score=138.15 Aligned_cols=171 Identities=11% Similarity=0.153 Sum_probs=112.2
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-CC----------------CCCceeEe--cCCeEEEEEEccC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-AP----------------RPLTSYSI--QDGSTSVARYTPT 77 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l~----------------~~~~~~~~--~~~~~~~l~i~~~ 77 (365)
+....+.+|++++|.|.+.+.| .+ .+.|+|++... .. ...+.... .......|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 85 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSD-YWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSV 85 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGS-CEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCC-cEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCC
Confidence 3445688999999999976665 35 99999863210 10 01111111 1223458999999
Q ss_pred CCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEE
Q psy3823 78 SELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWT 156 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~ 156 (365)
+.+|+|.|+|.+.+.. .......|.|.. .+..+|.+...+.. ..+.+|+.++|.|.+.+. |.+..+.|+
T Consensus 86 ~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~-----~~~~~P~v~~~~~~----~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 155 (210)
T 3d9a_H 86 TTEDTATYYCANWDGD-YWGQGTLVTVSA-----AKTTPPSVYPLAPG----SAAQTNSMVTLGCLVKGYFPEPVTVTWN 155 (210)
T ss_dssp CGGGCEEEEEEETTSS-CBCCCEEEEECC-----CCCBCCEEEEECCT----TSCCCSSEEEEEEEEEEEBSSCCEEEEG
T ss_pred CcccCEEEEEEEecCc-ccccceEEEecc-----CCCCCCEEEEecCC----cccccCCcEEEEEEEeeEecCCcEEEEe
Confidence 9999999999998763 222446777731 01235665544322 246789999999999986 766359999
Q ss_pred eCCeEEeeCCCC-----ceEEeeceEEEeeecCCCCeEEEEEEEcCCCCC
Q psy3823 157 HNGITISNNASA-----GRIITNQTLVLQSVTRHSGGLYACSAINSQGEG 201 (365)
Q Consensus 157 ~~~~~l~~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 201 (365)
+++..+...... +.......|.|.+...+| |.|+|.|.|..+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 204 (210)
T 3d9a_H 156 SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASST 204 (210)
T ss_dssp GGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTE
T ss_pred eCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 988753211111 112224578898888877 99999999988743
No 268
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.74 E-value=2.8e-16 Score=134.71 Aligned_cols=175 Identities=15% Similarity=0.214 Sum_probs=108.6
Q ss_pred cceecCCcEEEEEEEEecC-CCCeeEEEeC--CeE--Ee--e----------CCCCceEEe------eceEEEeeecCCC
Q psy3823 130 SVLNEGVDIYFDCHIQANP-PYKKLIWTHN--GIT--IS--N----------NASAGRIIT------NQTLVLQSVTRHS 186 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p-~~~~i~W~~~--~~~--l~--~----------~~~~~~~~~------~~~l~i~~~~~~d 186 (365)
..+.+|++|+|.|.+.+.+ +...+.|++. +.. +. . ....+.... ..+|.|.+++.+|
T Consensus 18 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 97 (257)
T 3gkz_A 18 SLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSED 97 (257)
T ss_dssp SEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred eEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhh
Confidence 4688999999999999843 2334999982 111 11 0 001112221 2269999999999
Q ss_pred CeEEEEEEEcCCCCC---CcccEEEEEeeeee----cccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeE
Q psy3823 187 GGLYACSAINSQGEG---GSTPFDLNINKMVN----LIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFT 258 (365)
Q Consensus 187 ~G~Y~C~~~~~~~~~---~s~~~~l~v~~~~~----~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~ 258 (365)
+|.|.|.+.+..+.. ......|.|..+.. +.......|.+...+.. ..+.+|+.++|.|.+.+.+.+ . +.
T Consensus 98 sG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~-v~ 175 (257)
T 3gkz_A 98 TATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAI-MSASPGEKVTLTCSASSSVSSSH-LY 175 (257)
T ss_dssp CEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSE-EEECTTCCEEEEEEESSCCCGGG-EE
T ss_pred CEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCce-EEEeCCCcEEEEEEEccCccceE-EE
Confidence 999999999873221 22345677762100 00000012333333332 348899999999999988777 6 99
Q ss_pred EEeCCCCCCCC-------------CCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCc
Q psy3823 259 WAFNNSDTAPR-------------PLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 306 (365)
Q Consensus 259 W~~~~~~~~~~-------------~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g 306 (365)
|++.+...... ..+......+....|.|.+++.+|+|.|.|.|.|...
T Consensus 176 W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 236 (257)
T 3gkz_A 176 WYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFP 236 (257)
T ss_dssp EEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred EEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCc
Confidence 99853211111 1222223344566799999999999999999988543
No 269
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.74 E-value=8.7e-18 Score=139.82 Aligned_cols=163 Identities=15% Similarity=0.275 Sum_probs=109.0
Q ss_pred ceEEEEecCCcEEEEEEeCCC-------CCcceEEEEeCCCcC-----CC-----------CCCceeEecC--CeEEEEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDAN-------PQAQYFTWAFNNSGT-----AP-----------RPLTSYSIQD--GSTSVAR 73 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~-------p~~~~v~W~~~~~~~-----l~-----------~~~~~~~~~~--~~~~~l~ 73 (365)
+..+.+.+|+.++|.|..... +.+ .+.|+|++... +. ...+.....+ ....+|.
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 85 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPL-YVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLS 85 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCE-EEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCce-EEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEE
Confidence 456788999999999995432 456 99999987530 10 0011111111 1233799
Q ss_pred EccCCCCCCeEEEEEEEeCCCCC----cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec--
Q psy3823 74 YTPTSELEYGTLLCWARNEQGNQ----RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-- 147 (365)
Q Consensus 74 i~~~~~~d~G~Y~C~a~~~~~~~----~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-- 147 (365)
|.+++.+|+|.|.|.+.+..+.. ...+.|.|... ..+|.+.. . ..+.+|+.++|.|.+.+.
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~------~~~p~i~~--~-----~~~~~G~~v~L~C~~~~~~~ 152 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTAL------IEKPDIHF--L-----EPLESGRPTRLSCSLPGSCE 152 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECC------CCCCEEC---------CCCCTTCCEEEEEECTTCCS
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecC------CCCCceec--C-----ccccCCCeEEEEEEeccCCC
Confidence 99999999999999999875321 25678888321 22455433 1 136789999999999764
Q ss_pred --CCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 148 --PPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 148 --p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
|.+. +.|++++..+... .....+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 153 ~~p~p~-v~W~~~~~~~~~~----~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~ 202 (214)
T 2zg1_A 153 AGPPLT-FSWTGNALSPLDP----ETTRSSELTLTPRPEDHGTNLTCQMKRQGAQ 202 (214)
T ss_dssp CSSCCE-EEEESSTTSSSCS----SCCCSSEEEECCCTTCCSCEEEEEEECC---
T ss_pred CCCCce-EEEeCCCCccCCC----CceeEEEEEEecccHHcCcEEEEEEEeCCCC
Confidence 5555 9999988643211 1134578999999999999999999997643
No 270
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.74 E-value=1.5e-17 Score=139.00 Aligned_cols=174 Identities=13% Similarity=0.190 Sum_probs=109.5
Q ss_pred cceecCCcEEEEEEEEecC-CCCeeEEEeC--CeEEee----C-----------CCCceEEe------eceEEEeeecCC
Q psy3823 130 SVLNEGVDIYFDCHIQANP-PYKKLIWTHN--GITISN----N-----------ASAGRIIT------NQTLVLQSVTRH 185 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p-~~~~i~W~~~--~~~l~~----~-----------~~~~~~~~------~~~l~i~~~~~~ 185 (365)
..+.+|++++|.|.+.+.+ ....+.|+++ +..+.. . ...+.... ..+|.|.+++..
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (219)
T 1c1e_H 10 ELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNE 89 (219)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGG
T ss_pred eEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCcc
Confidence 3578999999999999765 2334999986 332210 0 01122221 358999999999
Q ss_pred CCeEEEEEEEcCCCC---CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCC-ceeEEE
Q psy3823 186 SGGLYACSAINSQGE---GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQA-QYFTWA 260 (365)
Q Consensus 186 d~G~Y~C~~~~~~~~---~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~-~~~~W~ 260 (365)
|+|.|.|.+.+..+. .....+.|.|... ...+|.+....... .+..|+.+.|.|.+.+ .|.| . +.|+
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~------~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~-v~W~ 161 (219)
T 1c1e_H 90 DMATYFCARGTTIVRAMDYWGQGTSLTVSSA------KTTPPSVYPLAPGS-AAQTNSMVTLGCLVKGYFPEPVT-VTWN 161 (219)
T ss_dssp GCEEEEEEEEETTTTEEEEECCCEEEEECCC------CCBCCEEEEECCCS-SSCCSSEEEEEEEEEEEBSSCCE-EEEG
T ss_pred cCEEEEEEEeccCcccceeecCceEEEEecC------CCCCCeEEEecCcc-ccccCCeEEEEEEcccccCCCeE-EEEE
Confidence 999999999987632 1223466777610 00124443222111 2568999999999998 7888 6 9999
Q ss_pred eCCCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEE
Q psy3823 261 FNNSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCT 313 (365)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 313 (365)
++|........... ...+. .+.|.|.... .|.|.|+|.|.|..|.......
T Consensus 162 ~~g~~~~~~~~~~~-~~~~~~~~~s~L~i~~~~-~d~g~Y~C~a~n~~~~~~~~~~ 215 (219)
T 1c1e_H 162 SGSLSSGVHTFPAV-LQSDLYTLSSSVTVPSSP-RPSETVTCNVAHPASSTKVDKK 215 (219)
T ss_dssp GGTBCTTEEECCCE-ESSSCEEEEEEEEEESSS-TTTSCCEEEEEEGGGTEEEEEE
T ss_pred eCCcccceEecCCc-ccCCeEEEEEEEEEeccc-CCCCEEEEEEEeCCCCccEEEe
Confidence 98764211100011 11122 3468885544 4669999999999887654433
No 271
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.74 E-value=7.7e-17 Score=140.23 Aligned_cols=187 Identities=13% Similarity=0.134 Sum_probs=117.4
Q ss_pred CceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-CC-----------------CCCceeEe--cCCeEEEEEEc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-AP-----------------RPLTSYSI--QDGSTSVARYT 75 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l~-----------------~~~~~~~~--~~~~~~~l~i~ 75 (365)
++....+.+|++++|.|...+.| .+ .+.|+|++... +. ...+.... .......|.|.
T Consensus 32 ~p~~~~v~~G~~v~L~C~~~g~~~~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 110 (282)
T 1qok_A 32 QSGAELVRSGTSVKLSCTASGFNIKDS-YMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLS 110 (282)
T ss_dssp ECCCEEEETTCCEEEEEEEESSCGGGS-CEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEEC
T ss_pred CCCCEEEeCCCeEEEEEeccCCCCCCc-eEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEEC
Confidence 34567789999999999976665 46 99999965210 10 00111111 12345689999
Q ss_pred cCCCCCCeEEEEEEEeCCCC---C--cccEEEEEEeccccC------CCCCCCeEEEEcCCccCccceecCCcEEEEEEE
Q psy3823 76 PTSELEYGTLLCWARNEQGN---Q--RTPCTFHVVKAGECE------HPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI 144 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~~---~--~~~~~l~V~~~~~~~------~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~ 144 (365)
+++.+|+|.|.|.+.+..+. . ...+.|.|....... ....++.+...+ ....+.+|++++|.|.+
T Consensus 111 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~v~~G~~v~L~C~~ 186 (282)
T 1qok_A 111 SLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSP----AIMSASPGEKVTITCSA 186 (282)
T ss_dssp SCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEEC----SEEEECTTCCEEEEEEE
T ss_pred cCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCC----CEEEEcCCCcEEEEEEe
Confidence 99999999999999987651 1 134577773211000 000122333322 23467899999999999
Q ss_pred EecCCCCeeEEEe--CCeEEee---C-------CCCceEE----eeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEE
Q psy3823 145 QANPPYKKLIWTH--NGITISN---N-------ASAGRII----TNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDL 208 (365)
Q Consensus 145 ~~~p~~~~i~W~~--~~~~l~~---~-------~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l 208 (365)
.+.+ +. +.|++ +|..+.. . ...+... ...+|.|.+++.+|+|.|+|.+.+...........|
T Consensus 187 ~~~~-~~-v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l 264 (282)
T 1qok_A 187 SSSV-SY-MHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKL 264 (282)
T ss_dssp SSCC-SC-CEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEE
T ss_pred cCCC-ce-EEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEE
Confidence 9887 55 99999 5554321 0 0111211 145799999999999999999987544333344566
Q ss_pred EEe
Q psy3823 209 NIN 211 (365)
Q Consensus 209 ~v~ 211 (365)
.|.
T Consensus 265 ~V~ 267 (282)
T 1qok_A 265 ELK 267 (282)
T ss_dssp EEC
T ss_pred EEe
Confidence 665
No 272
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.74 E-value=2.4e-17 Score=141.41 Aligned_cols=172 Identities=15% Similarity=0.119 Sum_probs=109.3
Q ss_pred eEEEEecCCcEEEEEEeCCCC--CcceEEEEeCC--CcCCC----------------CCCceeEec--CCeEEEEEEccC
Q psy3823 20 RIYGALRNEQVLVSCTVDANP--QAQYFTWAFNN--SGTAP----------------RPLTSYSIQ--DGSTSVARYTPT 77 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~--~~~l~----------------~~~~~~~~~--~~~~~~l~i~~~ 77 (365)
....+.+|+.++|.|.+.+.| .+ .+.|+|++ .. +. ...+..... .....+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~-~v~W~k~~~g~~-~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSF-SVSWVRHPSGKG-PEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSL 85 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTS-CCEEEEEETTSC-CEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESC
T ss_pred CCccccCCceEEEEEEEecccCCCc-cEEEEEeCCCCC-cEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCC
Confidence 345689999999999977665 56 99999963 21 10 011111111 234568999999
Q ss_pred CCCCCeEEEEEEEeCCCC-------C--cccEEEEEEecccc--CCC----CCCCeEEEEcCCccCccceecCCcEEEEE
Q psy3823 78 SELEYGTLLCWARNEQGN-------Q--RTPCTFHVVKAGEC--EHP----VDKPSVQIKLGRNLNASVLNEGVDIYFDC 142 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~-------~--~~~~~l~V~~~~~~--~~~----~~~p~~~~~~~~~~~~~~~~~g~~v~l~C 142 (365)
+.+|+|.|+|.|.+..+. . .....|.|...... ..+ ..++.+...+ ....+.+|++++|.|
T Consensus 86 ~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~v~~G~~v~L~C 161 (257)
T 1f3r_B 86 QTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSP----SLLSASVGDRVTLSC 161 (257)
T ss_dssp CTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEET----SEECCCTTCCEEEEE
T ss_pred CcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccC----CEEEEcCCCCEEEEE
Confidence 999999999999987541 1 14457777311000 000 0011111212 234578999999999
Q ss_pred EEEecCCCCeeEEEe--CCeEEee---C-------CCCceEE----eeceEEEeeecCCCCeEEEEEEEcCC
Q psy3823 143 HIQANPPYKKLIWTH--NGITISN---N-------ASAGRII----TNQTLVLQSVTRHSGGLYACSAINSQ 198 (365)
Q Consensus 143 ~~~~~p~~~~i~W~~--~~~~l~~---~-------~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~ 198 (365)
.+.+.+.+. +.|++ +|..+.. . ...+... ...+|.|.+++.+|+|.|+|.+.|..
T Consensus 162 ~~~~~~~~~-v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 162 KGSQNINNY-LAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp ECSSCCBTC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred EECCcCCCc-EEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 999887776 99999 5543311 0 0111211 13479999999999999999999864
No 273
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.74 E-value=1.6e-17 Score=137.71 Aligned_cols=165 Identities=12% Similarity=0.142 Sum_probs=107.4
Q ss_pred eecCCcEEEEEEEEecC---CCCeeEEEeCCeEEeeCC-------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCC
Q psy3823 132 LNEGVDIYFDCHIQANP---PYKKLIWTHNGITISNNA-------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEG 201 (365)
Q Consensus 132 ~~~g~~v~l~C~~~~~p---~~~~i~W~~~~~~l~~~~-------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 201 (365)
+.+|++++|.|.+.+.+ .+..+.|++++..+.... ..+.......|.|.+++.+|+|.|+|.+.|..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 78999999999999874 344599999997764211 01112234579999999999999999999987753
Q ss_pred C-cccEEE--EEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCCCCCCCCCC-ceeEe
Q psy3823 202 G-STPFDL--NINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSDTAPRPL-TSYSI 276 (365)
Q Consensus 202 ~-s~~~~l--~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~~~~~~~~-~~~~~ 276 (365)
. ...+.+ .+. .+|.+........ ...|+.+.|.|.+.|. |++..+.|+++|........ .....
T Consensus 95 ~~~~~v~~~~~~~----------~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~ 163 (207)
T 2vol_A 95 PIEKTISKTKGRP----------KAPQVYTLPPPKE-QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMD 163 (207)
T ss_dssp CEEEEECCCCCCC----------BCCEEEEECCCTG-GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEEC
T ss_pred ceEEEeccCCCCC----------cCCeEEEeCCCHH-HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceEC
Confidence 2 122222 222 5666543222211 2358999999999985 44324999999874321110 11123
Q ss_pred eCCCE---EEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 277 QDGST---SVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 277 ~~~~~---s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
.++.. +.|.|.....+|.|.|+|.|.|....
T Consensus 164 ~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 164 TDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp TTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred CCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 34433 34666666667899999999998654
No 274
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.74 E-value=2.9e-17 Score=138.22 Aligned_cols=172 Identities=13% Similarity=0.147 Sum_probs=107.8
Q ss_pred CceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCc-CCC-----C------------CCceeEe--cCCeEEEEEEc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSG-TAP-----R------------PLTSYSI--QDGSTSVARYT 75 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~-~l~-----~------------~~~~~~~--~~~~~~~l~i~ 75 (365)
++....+.+|++++|.|...+.+ .+ .+.|+|++.. .+. . ..+.... .......|.|.
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNY-WINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLS 84 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccc-eEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEEC
Confidence 34566789999999999976666 56 9999997521 010 0 0111111 12345589999
Q ss_pred cCCCCCCeEEEEEEEeCCCCC-cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCee
Q psy3823 76 PTSELEYGTLLCWARNEQGNQ-RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKL 153 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i 153 (365)
+++.+|+|.|.|.+.+..... .....|.|... +..+|.+.+.... ..+.+|+.++|.|.+.+. |.+..+
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~-----~~~~P~v~~~~~~----~~~~~g~~v~L~C~~~g~~P~p~~v 155 (227)
T 1mju_H 85 SLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAA-----KTTAPSVYPLAPV----CGDTSGSSVTLGCLVKGYFPEPVTL 155 (227)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEECSS-----CCBCCEEEEECCC----C------CEEEEEEEEEEBSSCCEE
T ss_pred CCCcccCEEEEEEECCCCceEEcCcEEEEEcCC-----CCCCCEEEEecCC----ccccCCCcEEEEEEeecEeCCCeEE
Confidence 999999999999998753211 13457887310 1235655543321 235689999999999985 666469
Q ss_pred EEEeCCeEEeeCCCC-----ceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 154 IWTHNGITISNNASA-----GRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 154 ~W~~~~~~l~~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.|++++..+...... +.......|.|.....+| |.|+|.|.|..+.
T Consensus 156 ~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 206 (227)
T 1mju_H 156 TWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 206 (227)
T ss_dssp EEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGT
T ss_pred EEecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCC
Confidence 999988754211011 112234578888888878 9999999996653
No 275
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.74 E-value=1.8e-16 Score=135.85 Aligned_cols=173 Identities=14% Similarity=0.262 Sum_probs=107.7
Q ss_pred ceEEEEecCCcEEEEEEeCCC--CCcceEEEEeCCCcC-CC------------CCCceeEecCCeEEEEEEccCCCCCCe
Q psy3823 19 QRIYGALRNEQVLVSCTVDAN--PQAQYFTWAFNNSGT-AP------------RPLTSYSIQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~--p~~~~v~W~~~~~~~-l~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G 83 (365)
+....+.+|++++|.|.+.+. |.+ .+.|+|..... .. ...+......+....|.|.+++.+|+|
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 87 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSN-YVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEA 87 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTS-CCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCc-eEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCE
Confidence 345778999999999997665 677 99999953210 10 111112222334558999999999999
Q ss_pred EEEEEEEeCCCCC---cccEEEEEEeccccCCC------------CCCCeEEEEcCCccCccceecCCcEEEEEEEEecC
Q psy3823 84 TLLCWARNEQGNQ---RTPCTFHVVKAGECEHP------------VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANP 148 (365)
Q Consensus 84 ~Y~C~a~~~~~~~---~~~~~l~V~~~~~~~~~------------~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p 148 (365)
.|+|.+.+..+.. .....|.|........+ ...+.+.. + ....+.+|++++|.|.+.+.+
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~v~~G~~v~L~C~~~~~~ 162 (256)
T 3ux9_B 88 DYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVE-S----GGGLVQPGGSLRLSCAASGFT 162 (256)
T ss_dssp EEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEE-E----CCEEECTTCCEEEEEEEESSC
T ss_pred EEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEc-C----CCeEEcCCCeEEEEEEEeCCc
Confidence 9999999865422 25567777321100000 00112222 2 223578999999999999865
Q ss_pred --CCCeeEEEeC--CeEEee------CC---------CCceEEe------eceEEEeeecCCCCeEEEEEEEcCC
Q psy3823 149 --PYKKLIWTHN--GITISN------NA---------SAGRIIT------NQTLVLQSVTRHSGGLYACSAINSQ 198 (365)
Q Consensus 149 --~~~~i~W~~~--~~~l~~------~~---------~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~~ 198 (365)
.+. +.|+++ +..+.. .. ..+.... ..+|.|.+++.+|+|.|+|.+.|..
T Consensus 163 ~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 163 FSSYA-MSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp GGGSE-EEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred ccccE-EEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 444 999985 332210 00 0112111 2359999999999999999999863
No 276
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.74 E-value=1.6e-17 Score=138.59 Aligned_cols=173 Identities=11% Similarity=0.184 Sum_probs=108.8
Q ss_pred ceecCCcEEEEEEEEec-CCCCeeEEEeC---CeE--Ee-eCC----------CCceEE----eeceEEEeeecCCCCeE
Q psy3823 131 VLNEGVDIYFDCHIQAN-PPYKKLIWTHN---GIT--IS-NNA----------SAGRII----TNQTLVLQSVTRHSGGL 189 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~-p~~~~i~W~~~---~~~--l~-~~~----------~~~~~~----~~~~l~i~~~~~~d~G~ 189 (365)
.+.+|++++|.|.+.+. +.+. +.|++. ... +. ... ..+... .+.+|.|.+++..|+|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 89 (218)
T 3s96_B 11 SFSLGASAKLTCTLNSQHSTYT-IEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEAI 89 (218)
T ss_dssp EEETTSCEEEEEEECGGGTTCC-EEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EECCCCcEEEEEECCCCCCCcE-EEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCEE
Confidence 57899999999999987 7776 999982 111 10 000 012221 14579999999999999
Q ss_pred EEEEEEcCCC----CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCCceeEEEeCCC
Q psy3823 190 YACSAINSQG----EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNNS 264 (365)
Q Consensus 190 Y~C~~~~~~~----~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~W~~~~~ 264 (365)
|.|.+.+..+ ......+.|.|... ...+|.+........ ...|+.++|.|.+.+ .|.+..+.|+++|.
T Consensus 90 Y~C~~~~~~~~~~~~~~~~~~~l~V~~~------~~~~P~~~~~~~~~~-~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~ 162 (218)
T 3s96_B 90 YICGVGDTIKEQFVYVFGGGTKVTVLGQ------PKSTPTLTVFPPSSE-ELKENKATLVCLISNFSPSGVTVAWKANGT 162 (218)
T ss_dssp EEEEEEEEETTEEEEEECCCEEEEEESC------CCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred EEEEEecCCCCceeEEEcCcEEEEEecC------CCCCceEEeeCCCcc-cccCCcEEEEEEECcccCCCeEEEEEECCE
Confidence 9999998775 12234567777610 002344433222211 456789999999998 46662499999887
Q ss_pred CCCCCCCcee-EeeCCCE---EEEEEcCCCcccCeEEEEEEEcCCccceec
Q psy3823 265 DTAPRPLTSY-SIQDGST---SVARYTPTSELEYGTLLCWARNEQGSQRTP 311 (365)
Q Consensus 265 ~~~~~~~~~~-~~~~~~~---s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 311 (365)
.......... ...++.. +.|.|.....+|+|.|+|.|.|..+....+
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 163 PITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp EC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred ECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 5433211111 1113332 348888888888999999999998876544
No 277
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.74 E-value=3.2e-17 Score=136.42 Aligned_cols=167 Identities=17% Similarity=0.278 Sum_probs=108.9
Q ss_pred cceecCCcEEEEEEEEec------CCCCeeEEEeCCeE------EeeC---------CCCceEEe------eceEEEeee
Q psy3823 130 SVLNEGVDIYFDCHIQAN------PPYKKLIWTHNGIT------ISNN---------ASAGRIIT------NQTLVLQSV 182 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~------p~~~~i~W~~~~~~------l~~~---------~~~~~~~~------~~~l~i~~~ 182 (365)
..+.+|++|+|.|.+.+. .+...+.|++++.. +... ...+.... +.+|.|.++
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 89 (214)
T 2zg1_A 10 VTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDA 89 (214)
T ss_dssp EEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSC
T ss_pred EEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccC
Confidence 357899999999998853 13344999997642 1100 01122221 347999999
Q ss_pred cCCCCeEEEEEEEcCCCCC---CcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee----CCCc
Q psy3823 183 TRHSGGLYACSAINSQGEG---GSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN----PQAQ 255 (365)
Q Consensus 183 ~~~d~G~Y~C~~~~~~~~~---~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~----p~~~ 255 (365)
+..|+|.|.|.+.+..+.. .+..+.|.|..+ ...|.+..+ .. +.+|+.++|.|.+.+. |.|.
T Consensus 90 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-------~~~p~i~~~-~~---~~~G~~v~L~C~~~~~~~~~p~p~ 158 (214)
T 2zg1_A 90 RMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTAL-------IEKPDIHFL-EP---LESGRPTRLSCSLPGSCEAGPPLT 158 (214)
T ss_dssp CGGGCEEEEEEEEETTTEEEECCSSCEEEEEECC-------CCCCEEC---CC---CCTTCCEEEEEECTTCCSCSSCCE
T ss_pred CHhhCceEEEEEEcCCCceeeecCCceEEEEecC-------CCCCceecC-cc---ccCCCeEEEEEEeccCCCCCCCce
Confidence 9999999999999875321 224677888711 124444321 11 6789999999999764 7787
Q ss_pred eeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEE
Q psy3823 256 YFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFH 315 (365)
Q Consensus 256 ~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 315 (365)
+.|++++..... .. ....+.|.|..+..+|+|.|+|.|.|..+.......+.
T Consensus 159 -v~W~~~~~~~~~--~~-----~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 159 -FSWTGNALSPLD--PE-----TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp -EEEESSTTSSSC--SS-----CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred -EEEeCCCCccCC--CC-----ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 999998764211 11 12345699999999999999999999876544333433
No 278
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.73 E-value=1.4e-16 Score=135.11 Aligned_cols=163 Identities=14% Similarity=0.119 Sum_probs=109.1
Q ss_pred cceecCCcEEEEEEEEecC----CCCeeEEEeC--CeE---EeeC-------CCCceEEe----eceEEEeeecCCCCeE
Q psy3823 130 SVLNEGVDIYFDCHIQANP----PYKKLIWTHN--GIT---ISNN-------ASAGRIIT----NQTLVLQSVTRHSGGL 189 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p----~~~~i~W~~~--~~~---l~~~-------~~~~~~~~----~~~l~i~~~~~~d~G~ 189 (365)
..+.+|++|+|.|.+.+.+ .+. +.|+++ +.. +... ...+.... ..+|.|.+++..|+|.
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~~~~~~-i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 89 (240)
T 1moe_A 11 LAVSLGQRATMSCRAGESVDIFGVGF-LHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVAT 89 (240)
T ss_dssp EEECTTSCEEEEEEESSCCEETTEEC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEecCCCCEEEEEeCCCccccCCCce-EEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEE
Confidence 4678999999999999877 455 999984 221 1110 01122221 2379999999999999
Q ss_pred EEEEEEcCCCCCCcccEEEEEeeeeecccccCCC-----CceecCccceeeeecCceEEEEEEEeeeCC--CceeEEEeC
Q psy3823 190 YACSAINSQGEGGSTPFDLNINKMVNLIFNSIDE-----PVCKQSQQRIYGALRNEQVLVSCTVDANPQ--AQYFTWAFN 262 (365)
Q Consensus 190 Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~~W~~~ 262 (365)
|+|.+.|..+...+....|.|. .. |.+.........+.+|+.++|.|.+.+.|. +. +.|+++
T Consensus 90 Y~C~~~n~~~~~~~~~~~l~V~----------~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~-v~W~k~ 158 (240)
T 1moe_A 90 YYCQQTNEDPYTFGGGTKLEIK----------GGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTY-MHWVKQ 158 (240)
T ss_dssp EEEEECSSSSCCBCCCEEEEEC----------CCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSC-EEEEEE
T ss_pred EEEEEccCCceeecCCEEEEEe----------cCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCE-EEEEEE
Confidence 9999999876544456678877 32 222211122233889999999999998774 45 999996
Q ss_pred CCCCCC------------------CCCceeEee--CCCEEEEEEcCCCcccCeEEEEEEEcC
Q psy3823 263 NSDTAP------------------RPLTSYSIQ--DGSTSVARYTPTSELEYGTLLCWARNE 304 (365)
Q Consensus 263 ~~~~~~------------------~~~~~~~~~--~~~~s~l~i~~v~~~d~G~Y~C~a~n~ 304 (365)
+..... ...+..... ......|.|.+++.+|+|.|+|.|.+.
T Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 159 RPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFGY 220 (240)
T ss_dssp CTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECST
T ss_pred CCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEec
Confidence 321111 011222221 245567999999999999999999853
No 279
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.73 E-value=1.7e-16 Score=132.77 Aligned_cols=173 Identities=13% Similarity=0.146 Sum_probs=114.5
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-C---C--------------CCCceeEec--CCeEEEEEEcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-A---P--------------RPLTSYSIQ--DGSTSVARYTP 76 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l---~--------------~~~~~~~~~--~~~~~~l~i~~ 76 (365)
+....+.+|++++|.|...+.+ .+ .+.|||..... + . ...+..... ......|.|.+
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKY-WMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSK 85 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECS
T ss_pred CCCeEecCCCcEEEEEEecCccCCCc-eEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECC
Confidence 3457789999999999976655 45 89999864210 0 0 011111111 23456899999
Q ss_pred CCCCCCeEEEEEEEeCCCC---CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CC-CC
Q psy3823 77 TSELEYGTLLCWARNEQGN---QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PP-YK 151 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~~~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~ 151 (365)
++.+|+|.|.|.+.+..+. ......|.|... +..+|.+.+.+ . ..+.+|+.++|.|.+.+. |. +.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~-----~~~~P~v~~~~-~----~~~~~g~~v~L~C~~~g~~P~~~~ 155 (220)
T 2fbj_H 86 VRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAE-----SARNPTIYPLT-L----PPALSSDPVIIGCLIHDYFPSGTM 155 (220)
T ss_dssp CCGGGCEEEEEEEEETTTEEEEECCCEEEEECSS-----CCBCCEEEEEC-C----CSSSCCSSEEEEEEEEEEBSCCCE
T ss_pred CChhhCEEEEEEEeccccccceecCCEEEEecCC-----CCCCCEEEEee-c----ccccCCCcEEEEEEEEeEECCCcE
Confidence 9999999999999986542 124467887311 12356665543 1 235789999999999986 55 34
Q ss_pred eeEEEeCCeEEeeCCC------CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCC
Q psy3823 152 KLIWTHNGITISNNAS------AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGG 202 (365)
Q Consensus 152 ~i~W~~~~~~l~~~~~------~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 202 (365)
.+.|++++..+..... .+.......|.|......|+|.|+|.+.|..+...
T Consensus 156 ~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 156 NVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred EEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 5999999876521111 11111234688888888999999999999987644
No 280
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.73 E-value=8.6e-19 Score=145.83 Aligned_cols=173 Identities=14% Similarity=0.163 Sum_probs=110.8
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeC--CeEEee----------CCCCceEEe----eceEEEeeecCCCCeEEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHN--GITISN----------NASAGRIIT----NQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~--~~~l~~----------~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+.+|++++|.|.+.+.+.+. +.|+++ +..+.. ....+.... ..+|.|.+++..|+|.|+|.
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~-v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 87 (212)
T 1nfd_E 9 ASVTVGETVKITCSGDQLPKNF-AYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCL 87 (212)
T ss_dssp EEEETTSCCCEEEEETTGGGSC-CEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEE
T ss_pred EEEeCCCcEEEEEecCCCCCCe-EEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEE
Confidence 3578999999999988777666 999984 333210 001122211 34899999999999999999
Q ss_pred EEcCCCC--CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CC-CceeEEEeCCCCCCCC
Q psy3823 194 AINSQGE--GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQ-AQYFTWAFNNSDTAPR 269 (365)
Q Consensus 194 ~~~~~~~--~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~~W~~~~~~~~~~ 269 (365)
+.|..+. .......|.|... ...+|.+........ +..|+.++|.|.+.+. |+ +. +.|+++|......
T Consensus 88 ~~n~~~~~~~~~~~~~l~V~~~------~~~~p~v~~~~~~~~-~~~g~~v~L~C~~~g~~p~~~~-v~W~k~g~~~~~~ 159 (212)
T 1nfd_E 88 SSYGDNNDLVFGSGTQLTVLRG------PKSSPKVTVFPPSPE-ELRTNKATLVCLVNDFYPGSAT-VTWKANGATINDG 159 (212)
T ss_dssp EEETTTTEEEECCCEEEEEECC------CCBCCEEECCCCCHH-HHHTTEECCCEEEEEEBSSCCE-EEEEETTEEECSS
T ss_pred EEcccCcccccCCceEEEEccC------CCCCCEEEeeCCchH-hccCCceEEEEEEEeeECCccE-EEEEECCeEcCCC
Confidence 9973221 1123355666410 003454443222212 4579999999999987 44 56 9999998644322
Q ss_pred CCceeE--eeCC--CEEEEEEcCCCcccCeEEEEEEEcCCccceec
Q psy3823 270 PLTSYS--IQDG--STSVARYTPTSELEYGTLLCWARNEQGSQRTP 311 (365)
Q Consensus 270 ~~~~~~--~~~~--~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 311 (365)
...... ..++ ..+.|.|.++..+|+|.|+|.|.|..+..+.+
T Consensus 160 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 205 (212)
T 1nfd_E 160 VKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVEKS 205 (212)
T ss_dssp CBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCCCC
T ss_pred eecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEEEE
Confidence 111111 1111 12458899999999999999999998876544
No 281
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.73 E-value=4.4e-17 Score=136.32 Aligned_cols=171 Identities=12% Similarity=0.148 Sum_probs=112.6
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC----C-C-----C----------CCceeEe--cCCeEEEEEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT----A-P-----R----------PLTSYSI--QDGSTSVARY 74 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~----l-~-----~----------~~~~~~~--~~~~~~~l~i 74 (365)
+....+.+|++++|.|...+.| .+ .+.|+|++... + . . ..+.... .......|.|
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNY-WMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQM 85 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGS-EEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCc-cEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEE
Confidence 4456789999999999976655 56 99999964210 0 0 0 0111111 1223458999
Q ss_pred ccCCCCCCeEEEEEEEeCCCCC-c--ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCC
Q psy3823 75 TPTSELEYGTLLCWARNEQGNQ-R--TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPY 150 (365)
Q Consensus 75 ~~~~~~d~G~Y~C~a~~~~~~~-~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~ 150 (365)
.+++.+|+|.|.|.+.+..+.. . ....|.|.. .+..+|.+...+.. ..+.+|+.++|.|.+.+. |.+
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~-----~~~~~P~i~~~~~~----~~~~~g~~v~L~C~~~g~~P~p 156 (220)
T 1pz5_B 86 NNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSS-----ATTTAPSVYPLVPG----CSDTSGSSVTLGCLVKGYFPEP 156 (220)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECS-----SCCBCCEEEEECCC----SCCSCSSSEEEEEEEEEEBSSC
T ss_pred ccCCHHHCEEEEEEEecCCcccceECCCEEEEEcc-----CCCCCCeEEEcccc----cccCCCCcEEEEEEEEEEeCCC
Confidence 9999999999999999865321 1 456777721 01235665554322 235789999999999987 777
Q ss_pred CeeEEEeCCeEE--eeCCC---CceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 151 KKLIWTHNGITI--SNNAS---AGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 151 ~~i~W~~~~~~l--~~~~~---~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
..+.|++++... ..... .+.....+.|.|.+...++ |.|+|.|.|..+.
T Consensus 157 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 210 (220)
T 1pz5_B 157 VTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASK 210 (220)
T ss_dssp CEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGT
T ss_pred eEEEEecCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCcc
Confidence 359999987631 00000 0222335678898888867 9999999999874
No 282
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.73 E-value=3e-17 Score=136.88 Aligned_cols=171 Identities=13% Similarity=0.092 Sum_probs=103.8
Q ss_pred ceEEEEecCCcEEEEEEeCC--CCCcceEEEEeCCCcC-CC-------C---------CCceeEecCCeEEEEEEccCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDA--NPQAQYFTWAFNNSGT-AP-------R---------PLTSYSIQDGSTSVARYTPTSE 79 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~--~p~~~~v~W~~~~~~~-l~-------~---------~~~~~~~~~~~~~~l~i~~~~~ 79 (365)
+....+.+|++++|.|...+ .+.. .+.|||..... .. . ..+...........|.|.+++.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTY-SMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTC-CEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCC-eEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 34567899999999999644 3355 99999853210 00 0 0111112244555799999999
Q ss_pred CCCeEEEEEEEeCCCC----CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCC-CCeeE
Q psy3823 80 LEYGTLLCWARNEQGN----QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP-YKKLI 154 (365)
Q Consensus 80 ~d~G~Y~C~a~~~~~~----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~-~~~i~ 154 (365)
+|+|.|.|.+.+..+. ......|.|.. .+..+|.+...+.. ..+.+|+.++|.|.+.+.++ +..+.
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~P~i~~~~~~----~~~~~g~~v~l~C~~~~~~p~~~~v~ 155 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVSS-----GQPKAPSVFPLAPC----CGDTPSSTVTLGCLVKGYLPEPVTVT 155 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEECS-----SCCBCCEEEEECCC----TTCCC--CEEEEEEEEEEBSSCCEEE
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEeC-----CCcCCCEEEEecCC----ccccCCCcEEEEEEEeeeeCCCeEEE
Confidence 9999999999987553 22456777721 11246665544322 24668999999999998544 44477
Q ss_pred EEeCCeEEeeCCCCceEEeeceEEE---eeecCCCCeEEEEEEEcCCCC
Q psy3823 155 WTHNGITISNNASAGRIITNQTLVL---QSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 155 W~~~~~~l~~~~~~~~~~~~~~l~i---~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
|+++|..+...........++.+.+ ..+...| |.|+|.|.|..+.
T Consensus 156 W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~ 203 (215)
T 3nl4_H 156 WNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATN 203 (215)
T ss_dssp EGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGT
T ss_pred EeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCC
Confidence 9998864432111112222334444 4456667 9999999998764
No 283
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.73 E-value=8.9e-18 Score=139.54 Aligned_cols=171 Identities=12% Similarity=0.134 Sum_probs=111.5
Q ss_pred ceecCCcEEEEEEEEecCCCCeeEEEeC--CeEEe---eC-------CCCceEE----eeceEEEeeecCCCCeEEEEEE
Q psy3823 131 VLNEGVDIYFDCHIQANPPYKKLIWTHN--GITIS---NN-------ASAGRII----TNQTLVLQSVTRHSGGLYACSA 194 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~p~~~~i~W~~~--~~~l~---~~-------~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~ 194 (365)
.+.+|++++|.|.+. +.+. +.|+++ +..+. .. ...+... .+.+|.|.+++..|+|.|.|.+
T Consensus 11 ~v~~G~~v~L~C~~~--~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 87 (211)
T 3tv3_L 11 SGSPGQSITISCTGT--SNNF-VSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGS 87 (211)
T ss_dssp EECTTCEEEEEEECC--CSSC-EEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEE
T ss_pred EEcCCCCEEEEEEEC--CCCe-EEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEE
Confidence 577999999999987 5555 999983 22211 00 0111221 1457999999999999999999
Q ss_pred EcCCC-CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCC--CceeEEEeCCCCCCCCCC
Q psy3823 195 INSQG-EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ--AQYFTWAFNNSDTAPRPL 271 (365)
Q Consensus 195 ~~~~~-~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~~W~~~~~~~~~~~~ 271 (365)
.+..+ ......+.|.|... ...+|.+........ +..|+.++|.|.+.+.++ +. +.|+++|........
T Consensus 88 ~~~~~~~~~~~~~~l~V~~~------~~~~P~v~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~-v~W~k~g~~l~~~~~ 159 (211)
T 3tv3_L 88 LVGNWDVIFGGGTKLTVLGQ------PKAAPSVTLFPPSSE-ELQANKATLVCLISDFYPGAVT-VAWKADSSPVKAGVE 159 (211)
T ss_dssp EETTTEEEECCCEEEEECCS------CCBCCEEEEECCCHH-HHHTTCEEEEEEEEEEBSSCCE-EEEEETTEEECTTEE
T ss_pred ecCCCceeECCCceEEEeCC------CCcCCeeEecCCchh-hhcCCCeEEEEEeeeecCCCeE-EEEEECCeecCCCcc
Confidence 99877 23335566777610 002444443222222 347999999999998643 55 999998864432111
Q ss_pred ce--eEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecE
Q psy3823 272 TS--YSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPC 312 (365)
Q Consensus 272 ~~--~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 312 (365)
.. ....++. .+.|.|.++..+|+|.|+|.|.|..+....++
T Consensus 160 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 160 TTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp ECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred cCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 11 1112222 25689999988999999999999987765543
No 284
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.73 E-value=1.3e-16 Score=136.75 Aligned_cols=175 Identities=13% Similarity=0.216 Sum_probs=110.7
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-CC-------------CCCceeE--ecCCeEEEEEEccCCCCC
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-AP-------------RPLTSYS--IQDGSTSVARYTPTSELE 81 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l~-------------~~~~~~~--~~~~~~~~l~i~~~~~~d 81 (365)
.+..+.+.+|++++|.|...+.|.+ .+.|+|..... .. ...+... .......+|.|.+++.+|
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D 87 (256)
T 3tf7_C 9 PDARVTVSEGASLQLRCKYSYSATP-YLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSD 87 (256)
T ss_dssp SCSEEEEETTSCEEECCEEECSSCC-EEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGG
T ss_pred cCceEEecCCCeEEEEEEeCCCCCc-eEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCccc
Confidence 4567788999999999997777888 99999843210 00 0011111 233445689999999999
Q ss_pred CeEEEEEEEeCCCCCc----ccEEEEEEeccc-----------cCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe
Q psy3823 82 YGTLLCWARNEQGNQR----TPCTFHVVKAGE-----------CEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA 146 (365)
Q Consensus 82 ~G~Y~C~a~~~~~~~~----~~~~l~V~~~~~-----------~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 146 (365)
+|.|.|.+.+..+... ....|.|...+. ......+|.+...+ ....+.+|++++|.|.+.+
T Consensus 88 sG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p----~~~~v~~G~~v~L~C~~~~ 163 (256)
T 3tf7_C 88 SAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSP----RNKVTVTGENVTLSCRQTN 163 (256)
T ss_dssp CSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESC----SEEEEETTCCEEECEEECS
T ss_pred CEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecC----CEEEEeCCCcEEEEEEcCC
Confidence 9999999998765322 456777742100 00001234443332 2345779999999999987
Q ss_pred cCCCCeeEEEeC--CeEE---ee--CC--------CCceEE-----eeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 147 NPPYKKLIWTHN--GITI---SN--NA--------SAGRII-----TNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 147 ~p~~~~i~W~~~--~~~l---~~--~~--------~~~~~~-----~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
. .+. +.|++. +..+ .. .. ..+... ...+|.|.+++.+|+|.|+|.+.|..|
T Consensus 164 ~-~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g 234 (256)
T 3tf7_C 164 S-HNY-MYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPG 234 (256)
T ss_dssp C-CSE-EEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETT
T ss_pred C-ceE-EEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCC
Confidence 5 444 999983 2111 10 00 011111 134799999999999999999998765
No 285
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.73 E-value=1e-16 Score=138.35 Aligned_cols=176 Identities=13% Similarity=0.145 Sum_probs=114.0
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-CC------------CC----CceeEe-cCCeEEEEEEccCCC
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-AP------------RP----LTSYSI-QDGSTSVARYTPTSE 79 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l~------------~~----~~~~~~-~~~~~~~l~i~~~~~ 79 (365)
.+..+.+.+|++++|.|... .+.+ .+.|+|..... .. .. .+.... .......|.|.+++.
T Consensus 32 ~p~~v~v~~G~~v~L~C~~~-~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 109 (268)
T 3pl6_D 32 TPSNKVTEKGKYVELRCDPI-SGHT-ALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTER 109 (268)
T ss_dssp CCSEEEEETTCCEEEEEBCB-TTCC-EEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCG
T ss_pred CCCEEEecCCCCEEEEEEeC-CCCc-eEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCc
Confidence 34567889999999999965 5677 99999932110 10 00 111111 223345899999999
Q ss_pred CCCeEEEEEEEeCCC--CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCC-CeeEEE
Q psy3823 80 LEYGTLLCWARNEQG--NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPY-KKLIWT 156 (365)
Q Consensus 80 ~d~G~Y~C~a~~~~~--~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~~i~W~ 156 (365)
+|+|.|+|.+.+... .......|.|..... ...+|.+.+... ....+.+|+.++|.|.+.+.+++ ..+.|+
T Consensus 110 ~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~---~~~~P~v~~~~~---~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 183 (268)
T 3pl6_D 110 GDSAVYLCATSALGDTQYFGPGTRLTVLEDLK---NVFPPEVAVFEP---SEAEISHTQKATLVCLATGFYPDHVELSWW 183 (268)
T ss_dssp GGCEEEEEEEESSSSSCEECCCEEEEEESCGG---GCBCCEEEEECC---CHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred ccCEEEEEEEecCCCceeeCCcEEEEEecCcc---cccCCceEEeCC---CcccccCCCceEEEEEECcccCCCeEEEEE
Confidence 999999999997422 222556777732100 022666555432 22345679999999999986554 359999
Q ss_pred eCCeEEeeCC-------------CCceEEeeceEEEeeecCCC-CeEEEEEEEcCCCCC
Q psy3823 157 HNGITISNNA-------------SAGRIITNQTLVLQSVTRHS-GGLYACSAINSQGEG 201 (365)
Q Consensus 157 ~~~~~l~~~~-------------~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~~ 201 (365)
++|..+.... ..+.......|.+.....+| +|.|+|.+.|.....
T Consensus 184 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~ 242 (268)
T 3pl6_D 184 VNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 242 (268)
T ss_dssp ESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred ECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCC
Confidence 9999885321 11122223567788777777 999999999886543
No 286
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.73 E-value=2.4e-16 Score=134.24 Aligned_cols=174 Identities=12% Similarity=0.237 Sum_probs=108.0
Q ss_pred ceEEEEecCCcEEEEEEeCCCC-----CcceEEEEeCCCcC-CC------------CCCceeEecCCeEEEEEEccCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP-----QAQYFTWAFNNSGT-AP------------RPLTSYSIQDGSTSVARYTPTSEL 80 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p-----~~~~v~W~~~~~~~-l~------------~~~~~~~~~~~~~~~l~i~~~~~~ 80 (365)
+..+.+.+|++++|.|.+.+.| .+ .+.|+|+.... +. ...+...........|.|.+++.+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 86 (247)
T 1svz_A 8 PLYLPVSLGDQASISCRSSQTIVHNNGNT-YLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAE 86 (247)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCB-CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCeEEecCCCCEEEEEeCCCcccccCCCc-eEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHH
Confidence 4567789999999999987777 56 99999954210 10 011112222334458999999999
Q ss_pred CCeEEEEEEEeCCCCC-cccEEEEEEecccc---CCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecC--CCCeeE
Q psy3823 81 EYGTLLCWARNEQGNQ-RTPCTFHVVKAGEC---EHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANP--PYKKLI 154 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~~-~~~~~l~V~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p--~~~~i~ 154 (365)
|+|.|.|.+.+..+.. .....|.|...... ......|.+.+... ....+.+|++++|.|.+.+.+ .+. +.
T Consensus 87 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~G~~v~L~C~~~~~~~~~~~-v~ 162 (247)
T 1svz_A 87 DLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQS---GPELKKPGETVKISCKATNYAFTDYS-MH 162 (247)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEC---CCEEECTTCCEEEEEEEESSCGGGSC-EE
T ss_pred HCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCC---CceeecCCCcEEEEEEEcCcccCCcE-EE
Confidence 9999999998865432 24467777311000 00000022222222 123588999999999999875 344 99
Q ss_pred EEeCC--eEEe----eC-----------CCCceEEe------eceEEEeeecCCCCeEEEEEEEcC
Q psy3823 155 WTHNG--ITIS----NN-----------ASAGRIIT------NQTLVLQSVTRHSGGLYACSAINS 197 (365)
Q Consensus 155 W~~~~--~~l~----~~-----------~~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~ 197 (365)
|++++ ..+. .. ...+.... ..+|.|.+++.+|+|.|.|.+.|.
T Consensus 163 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 163 WVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99852 2111 00 01122221 248999999999999999999985
No 287
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.73 E-value=8.1e-18 Score=142.04 Aligned_cols=170 Identities=11% Similarity=0.113 Sum_probs=92.2
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCC--eEE---ee---------CCCCc--eEEeeceEEEeeecCCCCeEEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNG--ITI---SN---------NASAG--RIITNQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~--~~l---~~---------~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+.+|++++|.|.+.+.+.+. +.|++++ ..+ .. ..... ....+.+|.|.+++.+|+|.|.|.
T Consensus 33 ~~v~~G~~v~L~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 111 (233)
T 3bqu_C 33 LSMSIGEKVTIRCITSTDIDDD-MNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCL 111 (233)
T ss_dssp C-------CCEEEEEEEEESSC-EEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEEE
T ss_pred EEEecCCCEEEEEecCCcCCCe-EEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEEE
Confidence 4678999999999999877666 9999842 211 00 00111 111234799999999999999999
Q ss_pred EEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeCCCCCCCC-CC
Q psy3823 194 AINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNSDTAPR-PL 271 (365)
Q Consensus 194 ~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~-~~ 271 (365)
+.+..+........|.|... ..+|.+........ ...|+.++|.|.+.+.+++ ..+.|+++|...... ..
T Consensus 112 ~~~~~~~~~~~~~~l~V~~~-------~~~p~v~~~~~~~~-~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 183 (233)
T 3bqu_C 112 QSDNLPYTFGGGTNLEIKRA-------DAAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN 183 (233)
T ss_dssp ECSSSSCCBCCCCBC---CC-------CBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEE
T ss_pred EecCCceeecCCEEEEEeCC-------CCCCEEEEeCCCHH-hhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceE
Confidence 99876543333334555510 02555543222211 3469999999999986544 249999988744322 01
Q ss_pred ceeE--eeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 272 TSYS--IQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 272 ~~~~--~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
.... ..++. .+.|.|..+..+|+|.|+|.|.|.....
T Consensus 184 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 225 (233)
T 3bqu_C 184 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 225 (233)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---C
T ss_pred ecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCCc
Confidence 0111 12222 3568899998999999999999986553
No 288
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.73 E-value=4.4e-16 Score=132.26 Aligned_cols=162 Identities=12% Similarity=0.063 Sum_probs=106.8
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCC--e---EEeeC-------CCCceEEe----eceEEEeeecCCCCeEEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNG--I---TISNN-------ASAGRIIT----NQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~--~---~l~~~-------~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+.+|++++|.|.+.+.+.+. +.|+++. . .+... ...+.... ..+|.|.+++.+|+|.|.|.
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (242)
T 2znx_A 11 LSVTPGNSVSLSCRASQSIGNN-LHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQ 89 (242)
T ss_dssp EEECTTCCEEEEEEESSCCTTC-EEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEcCCCcEEEEEEeCCCCCce-EEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEe
Confidence 4678999999999999887666 9999842 1 11100 01122221 34799999999999999999
Q ss_pred EEcCCCCCCcccEEEEEeeeeecccccCCCCc-------------eecCccceeeeecCceEEEEEEEeeeC--CCceeE
Q psy3823 194 AINSQGEGGSTPFDLNINKMVNLIFNSIDEPV-------------CKQSQQRIYGALRNEQVLVSCTVDANP--QAQYFT 258 (365)
Q Consensus 194 ~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~-------------~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~~ 258 (365)
+.+..+...+....|.|. .+|. ....+... .+.+|+.++|.|.+.+.| .+. +.
T Consensus 90 ~~n~~~~~~~~~~~L~V~----------~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~G~~v~L~C~~~g~~~~~~~-v~ 157 (242)
T 2znx_A 90 QSNSXPYTFGGGTKLEIT----------GGGGSGGGGSGGGGSDIQLQESGPS-LVKPSQTLSLTCSVTGDSITSDY-XS 157 (242)
T ss_dssp ECSSSSCEECCCEEEEEC-------------------------CCEEEEECCS-EECTTSCEEEEEEEESSCGGGSC-EE
T ss_pred EecCCceEECCCEEEEEc----------CCCCCCcccccccccceeeecCCcc-eecCCCeEEEEEEEEccccCCcc-ee
Confidence 998755333345667776 3331 11111222 388999999999999875 466 99
Q ss_pred EEeCCCCCCC-----------------CCCceeEe--eCCCEEEEEEcCCCcccCeEEEEEEEcC
Q psy3823 259 WAFNNSDTAP-----------------RPLTSYSI--QDGSTSVARYTPTSELEYGTLLCWARNE 304 (365)
Q Consensus 259 W~~~~~~~~~-----------------~~~~~~~~--~~~~~s~l~i~~v~~~d~G~Y~C~a~n~ 304 (365)
|++++..... ...+.... ..+....|.|.+++.+|+|.|.|.|.|.
T Consensus 158 W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 158 XIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred eEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 9985321111 01122222 1344567999999999999999999984
No 289
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.73 E-value=9.6e-17 Score=137.60 Aligned_cols=189 Identities=12% Similarity=0.148 Sum_probs=114.7
Q ss_pred CceEEEEecCCcEEEEEEeCCC--CCcceEEEEeCCCc----CC-------------CCCCceeEe--cCCeEEEEEEcc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDAN--PQAQYFTWAFNNSG----TA-------------PRPLTSYSI--QDGSTSVARYTP 76 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~--p~~~~v~W~~~~~~----~l-------------~~~~~~~~~--~~~~~~~l~i~~ 76 (365)
++....+.+|++++|.|.+.+. +.+ .+.|+|.... .+ ....+.... ......+|.|.+
T Consensus 14 ~p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 92 (257)
T 3gkz_A 14 ESGPSLVKPSQTLSLTCSVTGDSVTSG-YWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKS 92 (257)
T ss_dssp EECCSEECTTCCEEEEEEEEESCCSSC-EEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEEcCCCcEEEEEEEEcccccce-EEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECC
Confidence 3445568999999999996553 466 9999994321 00 000111111 223455899999
Q ss_pred CCCCCCeEEEEEEEeCCCCC----cccEEEEEEeccc-----cCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec
Q psy3823 77 TSELEYGTLLCWARNEQGNQ----RTPCTFHVVKAGE-----CEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN 147 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~~~~----~~~~~l~V~~~~~-----~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 147 (365)
++.+|+|.|+|.+.+..+.. .....|.|..... ......+|.+...+ ....+.+|++++|.|.+.+.
T Consensus 93 v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p----~~~~v~~G~~v~L~C~~~~~ 168 (257)
T 3gkz_A 93 VSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSP----AIMSASPGEKVTLTCSASSS 168 (257)
T ss_dssp CCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSC----SEEEECTTCCEEEEEEESSC
T ss_pred CChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCC----ceEEEeCCCcEEEEEEEccC
Confidence 99999999999999863222 2456777732100 00000123332222 23467899999999999987
Q ss_pred CCCCeeEEEeC--CeEEe---eCC-------CCceEEe----eceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 148 PPYKKLIWTHN--GITIS---NNA-------SAGRIIT----NQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 148 p~~~~i~W~~~--~~~l~---~~~-------~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
+.+..+.|+++ +..+. ... ..+.... ..+|.|.+++.+|+|.|.|.+.+........-..|.|.
T Consensus 169 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~ 248 (257)
T 3gkz_A 169 VSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIK 248 (257)
T ss_dssp CCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred ccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEE
Confidence 77634999983 32221 000 0111111 34699999999999999999987654433344556665
No 290
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.73 E-value=1.6e-16 Score=134.72 Aligned_cols=174 Identities=13% Similarity=0.143 Sum_probs=112.5
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-C------------C---CCCce-eEecCCeEEEEEEccCCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-A------------P---RPLTS-YSIQDGSTSVARYTPTSELE 81 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l------------~---~~~~~-~~~~~~~~~~l~i~~~~~~d 81 (365)
+..+.+.+|+.++|.|...+ +.+ .+.|+|..... . . ...+. ..........|.|.+++.+|
T Consensus 9 p~~v~v~~G~~v~L~C~~~~-~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 86 (240)
T 3q5y_A 9 PRHIIKEKGGRSVLTCIPIS-GHS-NVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELED 86 (240)
T ss_dssp CSEEEEETTCCEEEEEECCT-TCC-EEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGG
T ss_pred cceeeecCCCcEEEEEEeCC-CCc-eEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhH
Confidence 45677899999999999754 777 99999932210 0 0 00111 11122345589999999999
Q ss_pred CeEEEEEEEeCCCC---CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEe
Q psy3823 82 YGTLLCWARNEQGN---QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTH 157 (365)
Q Consensus 82 ~G~Y~C~a~~~~~~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~ 157 (365)
+|.|+|.+.+.... ......|.|..... ...+|.+.+.... ...+.+|+.++|.|.+.+ .|.+..+.|++
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~---~~~~p~~~~~~~~---~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 160 (240)
T 3q5y_A 87 SAMYFCASSLRWGDEQYFGPGTRLTVLEDLR---NVTPPKVSLFEPS---KAEIANKQKATLVCLARGFFPDHVELSWWV 160 (240)
T ss_dssp CEEEEEEEESSTTBCCEECCCEEEEEESCGG---GCBCCEEEEECCC---HHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CEEEEEEEccCCCcceEEcCCEEEEEecccc---CCCCCeeEEeCCc---hhhcccCCceEEEEEEeeEECCCeEEEEEE
Confidence 99999999843221 12556677732100 0246666554332 234567999999999998 55554589999
Q ss_pred CCeEEeeCCCC---------ceEEeeceEEEeeecCCC-CeEEEEEEEcCCCC
Q psy3823 158 NGITISNNASA---------GRIITNQTLVLQSVTRHS-GGLYACSAINSQGE 200 (365)
Q Consensus 158 ~~~~l~~~~~~---------~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~ 200 (365)
+|..+...... +.......|.|.....+| .|.|+|.+.|....
T Consensus 161 ~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 161 NGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp TTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 99988532111 111113458888888888 77999999987653
No 291
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.73 E-value=3.6e-16 Score=134.64 Aligned_cols=175 Identities=13% Similarity=0.213 Sum_probs=109.6
Q ss_pred CceEEEEecCCcEEEEEEeCCCC------CcceEEEEeCC--CcCCC------------CCCceeEecCCeEEEEEEccC
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANP------QAQYFTWAFNN--SGTAP------------RPLTSYSIQDGSTSVARYTPT 77 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p------~~~~v~W~~~~--~~~l~------------~~~~~~~~~~~~~~~l~i~~~ 77 (365)
.+..+.+.+|+.++|.|...+.| .+ .+.|+|.. .. +. ...+...........|.|.++
T Consensus 11 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~-~v~W~k~~~g~~-~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v 88 (264)
T 2gjj_A 11 TPSSLPVSVGEKVTMTCKSSQTLLYSNNQKN-YLAWYQQKPGQS-PKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSV 88 (264)
T ss_dssp ECSEEEEETTCCEEEEEEESSCCEETTTTEE-CEEEEEECTTSC-CEEEEETTTEECTTSCTTEEEEEETTEEEEEESSC
T ss_pred cCCeEEecCCCcEEEEeEcCCcccccccCCc-eEEEEEECCCCC-cEEEEEecccCCCCCCccEEEecCCCEEEEEECCC
Confidence 35567889999999999987777 56 99999963 21 10 011112222334558999999
Q ss_pred CCCCCeEEEEEEEeCCCCC-cccEEEEEEecccc---------CCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec
Q psy3823 78 SELEYGTLLCWARNEQGNQ-RTPCTFHVVKAGEC---------EHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN 147 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~~-~~~~~l~V~~~~~~---------~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 147 (365)
+.+|+|.|.|.+.+..+.. ...+.|.|...... .....+|.+.+... ....+.+|++++|.|.+.+.
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~G~~v~L~C~~~~~ 165 (264)
T 2gjj_A 89 KAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQS---GPEVVKTGASVKISCKASGY 165 (264)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEEC---CCEEECTTCCEEEEEEEESS
T ss_pred CHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCC---CCEEEcCCCcEEEEEEEeCC
Confidence 9999999999998765422 24467777321000 00000122333222 12357899999999999987
Q ss_pred CC-CCeeEEEeC--CeE---Eee--CC----------CCceEEe------eceEEEeeecCCCCeEEEEEEEcC
Q psy3823 148 PP-YKKLIWTHN--GIT---ISN--NA----------SAGRIIT------NQTLVLQSVTRHSGGLYACSAINS 197 (365)
Q Consensus 148 p~-~~~i~W~~~--~~~---l~~--~~----------~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~ 197 (365)
+. ...+.|+++ +.. +.. .. ..+.... ..+|.|.+++.+|+|.|.|.+.|.
T Consensus 166 ~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 166 SFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp CGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred ccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 64 234999985 221 210 00 1112111 458999999999999999999985
No 292
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.73 E-value=2.6e-16 Score=131.95 Aligned_cols=173 Identities=13% Similarity=0.114 Sum_probs=112.5
Q ss_pred eEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-CC------C-----------CCceeEe--cCCeEEEEEEccC
Q psy3823 20 RIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-AP------R-----------PLTSYSI--QDGSTSVARYTPT 77 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l~------~-----------~~~~~~~--~~~~~~~l~i~~~ 77 (365)
....+.+|+.++|.|...+.+ .+ .+.|+|..... .. . ..+.... .......|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGY-GMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCc-eEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 456789999999999966555 35 89999864210 10 0 0111111 1223458999999
Q ss_pred CCCCCeEEEEEEEeCCC---C---CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCC
Q psy3823 78 SELEYGTLLCWARNEQG---N---QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPY 150 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~---~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~ 150 (365)
+.+|+|.|.|.+.+..+ . ....+.|.|.. .+..+|.+...... ..+.+|+.++|.|.+.+. |.+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~-----~~~~~P~i~~~~~~----~~~~~g~~v~L~C~~~g~~P~p 157 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSS-----GSASAPTLFPLVSC----ENSNPSSTVAVGCLAQDFLPDS 157 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECS-----SCCBCCEEEEEECT----TCCCSSSEEEEEEEEEEEBSSC
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEcc-----CCCCCCEEEEecCC----cccCCCCcEEEEEEEEEEeCCC
Confidence 99999999999988653 1 11345788831 01235665543211 235689999999999986 666
Q ss_pred CeeEEEe-CCeEEeeC---CC---CceEEeeceEEEeeecC--CCCeEEEEEEEcCCCCCC
Q psy3823 151 KKLIWTH-NGITISNN---AS---AGRIITNQTLVLQSVTR--HSGGLYACSAINSQGEGG 202 (365)
Q Consensus 151 ~~i~W~~-~~~~l~~~---~~---~~~~~~~~~l~i~~~~~--~d~G~Y~C~~~~~~~~~~ 202 (365)
..+.|++ +|..+... .. .+.......|.|..... +|.|.|+|.+.|..+...
T Consensus 158 ~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~ 218 (223)
T 1dee_B 158 ITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKE 218 (223)
T ss_dssp CEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEE
T ss_pred eEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCc
Confidence 4699999 88876420 00 11122245678877766 789999999999887543
No 293
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.72 E-value=9.2e-17 Score=136.65 Aligned_cols=174 Identities=14% Similarity=0.115 Sum_probs=112.5
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCC--------------CcCCCCC---CceeE-ecCCeEEEEEEccCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNN--------------SGTAPRP---LTSYS-IQDGSTSVARYTPTSEL 80 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~--------------~~~l~~~---~~~~~-~~~~~~~~l~i~~~~~~ 80 (365)
+..+.+.+|+.++|.| ..+.+.+ .+.|+|.. ....... .+... ........|.|.+++.+
T Consensus 9 p~~v~v~~G~~v~L~C-~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 86 (245)
T 4ei6_B 9 PSHQIIDMGQMVTLNC-DPVSNHL-YFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALE 86 (245)
T ss_dssp CSEEEEETTCCEEEEE-ECCTTCC-EEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGG
T ss_pred CceEEecCCCCEEEEE-EcCCCCC-EEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHh
Confidence 4557789999999999 5567888 99999921 1100000 11111 12234458999999999
Q ss_pred CCeEEEEEEEeCCC----CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEE
Q psy3823 81 EYGTLLCWARNEQG----NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIW 155 (365)
Q Consensus 81 d~G~Y~C~a~~~~~----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W 155 (365)
|+|.|+|.+.+... .......|.|..... ...+|.+.+.... ...+.+|+.++|.|.+.+. |.+..+.|
T Consensus 87 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~---~~~~p~~~~~~~~---~~~~~~g~~v~l~C~~~g~~p~~~~v~W 160 (245)
T 4ei6_B 87 DSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLK---NVFPPEVAVFEPS---EAEISHTQKATLVCLATGFYPDHVELSW 160 (245)
T ss_dssp GCEEEEEEEECSSTTCCCEECCCEEEEEESCGG---GCBCCEEEEECCC---HHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred HCEEEEEEEccCCCcceEEEcCCcEEEEecccC---CCCCceEEEeCCC---cccccCCCceEEEEEEeeEeCCCeEEEE
Confidence 99999999986432 122556777732100 0146665554322 2345679999999999984 44435999
Q ss_pred EeCCeEEeeCCC-------------CceEEeeceEEEeeecCCC-CeEEEEEEEcCCCC
Q psy3823 156 THNGITISNNAS-------------AGRIITNQTLVLQSVTRHS-GGLYACSAINSQGE 200 (365)
Q Consensus 156 ~~~~~~l~~~~~-------------~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~ 200 (365)
+++|..+..... .+.......|.|.....+| +|.|+|.+.|....
T Consensus 161 ~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 161 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp EETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 999998863211 1112223458888887778 99999999987543
No 294
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.72 E-value=5.3e-17 Score=138.84 Aligned_cols=178 Identities=13% Similarity=0.126 Sum_probs=113.1
Q ss_pred cceecCCcEEEEEEEEecC-----CCCeeEEEeCC--eE---Eee-------CCCCceEEe----eceEEEeeecCCCCe
Q psy3823 130 SVLNEGVDIYFDCHIQANP-----PYKKLIWTHNG--IT---ISN-------NASAGRIIT----NQTLVLQSVTRHSGG 188 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p-----~~~~i~W~~~~--~~---l~~-------~~~~~~~~~----~~~l~i~~~~~~d~G 188 (365)
..+.+|++|+|.|.+.+.+ .+. +.|++++ .. +.. ....+.... +.+|.|.+++.+|+|
T Consensus 44 ~~v~~G~~v~L~C~~~~~~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 122 (252)
T 3bkj_L 44 LPVNLGEQASISCRSSQSIVHSNGHTY-LEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLG 122 (252)
T ss_dssp EEECTTSCEEEEEEESSCCBCTTSCBC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EEEeCCCcEEEEEEcCCCccccCCCCc-EEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCE
Confidence 4578999999999998876 344 9999853 11 110 001122211 238999999999999
Q ss_pred EEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeC-CCceeEEEeCCCCCC
Q psy3823 189 LYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANP-QAQYFTWAFNNSDTA 267 (365)
Q Consensus 189 ~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~~~~~~W~~~~~~~~ 267 (365)
.|.|.+.+..+........|.|... ..+|.+........ +..|+.++|.|.+.+.+ ++..+.|+++|....
T Consensus 123 ~Y~C~~~~~~~~~~~~~~~l~V~~~-------~~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~ 194 (252)
T 3bkj_L 123 VYYCFQASLVPLTFGAGTKLELKRA-------DAAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 194 (252)
T ss_dssp EEEEEECSBSSCEECCCEEEEECCC-------CBCCEEEEECCCHH-HHHHTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred EEEEEEEcCCccEECCCEEEEEeCC-------CcCcEEEEeCCChh-hcCCCcEEEEEEEeeEeCCCcEEEEEECCeecC
Confidence 9999999876543333456776510 12455543222211 34789999999999854 432499999886432
Q ss_pred CC-CCceeE--eeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEc
Q psy3823 268 PR-PLTSYS--IQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 268 ~~-~~~~~~--~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 318 (365)
.. ...... ..++. .+.|.|.++..+|+|.|+|.|.|..... ++...+.+
T Consensus 195 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~--p~~~~~~~ 249 (252)
T 3bkj_L 195 NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS--PIVKSFNR 249 (252)
T ss_dssp SSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS--CEEEEEET
T ss_pred CCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC--CeeEeecc
Confidence 22 000111 12222 3569999999999999999999986654 44444443
No 295
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.72 E-value=3.9e-16 Score=133.71 Aligned_cols=176 Identities=14% Similarity=0.182 Sum_probs=109.7
Q ss_pred CccceecCCcEEEEEEEEec--CCCCeeEEEeC--CeE---Ee-eC-----------CCCceEEe------eceEEEeee
Q psy3823 128 NASVLNEGVDIYFDCHIQAN--PPYKKLIWTHN--GIT---IS-NN-----------ASAGRIIT------NQTLVLQSV 182 (365)
Q Consensus 128 ~~~~~~~g~~v~l~C~~~~~--p~~~~i~W~~~--~~~---l~-~~-----------~~~~~~~~------~~~l~i~~~ 182 (365)
....+.+|++|+|.|.+.+. +.+. +.|++. +.. +. .. ...+.... ..+|.|.++
T Consensus 14 ~~~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 92 (256)
T 3juy_B 14 GAEVKKPGASVKVSCQASGYRFSHFT-VHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL 92 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSC-EEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCceecCCCeEEEEEEeecccccCce-EEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCC
Confidence 44578899999999999873 4455 999972 211 10 00 01122222 236999999
Q ss_pred cCCCCeEEEEEEEcC-----------CCCCCcccEEEEEeeeeecc-----cccCCCCceecCccceeeeecCceEEEEE
Q psy3823 183 TRHSGGLYACSAINS-----------QGEGGSTPFDLNINKMVNLI-----FNSIDEPVCKQSQQRIYGALRNEQVLVSC 246 (365)
Q Consensus 183 ~~~d~G~Y~C~~~~~-----------~~~~~s~~~~l~v~~~~~~~-----~~~~~~p~~~~~~~~~~~~~~g~~~~l~C 246 (365)
+.+|+|.|.|.+.+. ..........|.|....... .....+|.+...+.. ..+.+|+.++|.|
T Consensus 93 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~G~~v~L~C 171 (256)
T 3juy_B 93 RSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGT-LSLSPGERATFSC 171 (256)
T ss_dssp CGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSE-EEECTTSCEEEEE
T ss_pred CcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCe-EEEeCCCCEEEEE
Confidence 999999999999986 11122244567776210000 000002333333333 3388999999999
Q ss_pred EEeeeCC-CceeEEEeCCCCCCC-------------CCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCc
Q psy3823 247 TVDANPQ-AQYFTWAFNNSDTAP-------------RPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 306 (365)
Q Consensus 247 ~~~~~p~-~~~~~W~~~~~~~~~-------------~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g 306 (365)
.+.+.|. +. +.|++....... ...+.....++....|.|.+++.+|+|.|.|.|.|..+
T Consensus 172 ~~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 172 RSSHSIRSRR-VAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp EESSCCTTCC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred EECCCcCCee-EEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 9998776 66 999984211111 11223333445567799999999999999999998654
No 296
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.72 E-value=3e-17 Score=145.74 Aligned_cols=170 Identities=15% Similarity=0.211 Sum_probs=112.2
Q ss_pred EEEecCCcEEEEEEeCCC-CCc--ceEEEEeCCCcCCCCCCceeE-ecCC---eEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 22 YGALRNEQVLVSCTVDAN-PQA--QYFTWAFNNSGTAPRPLTSYS-IQDG---STSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~-p~~--~~v~W~~~~~~~l~~~~~~~~-~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
..+.+|+.++|.|.+.+. |.+ ..++|++++...+........ ..++ ..+.|.|.+++.+|+|.|+|.|.|..+
T Consensus 123 ~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~ 202 (323)
T 2wqr_A 123 FDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHL 202 (323)
T ss_dssp HHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTS
T ss_pred HHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCC
Confidence 346789999999996554 433 389999976431433222111 1122 344799999999999999999998764
Q ss_pred CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeCCeEEeeCCC------
Q psy3823 95 NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHNGITISNNAS------ 167 (365)
Q Consensus 95 ~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~~~~l~~~~~------ 167 (365)
.. ...+.|.... ....+|.+.+.+... ....|+.++|.|.+.| .|++..+.|++||..+.....
T Consensus 203 ~~--~~~~~v~~~~---~~~~~P~v~~~~~~~----~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 273 (323)
T 2wqr_A 203 PR--ALMRSTTKTS---GPRAAPEVYAFATPE----WPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPR 273 (323)
T ss_dssp SS--CEEEEECCCC---SCCBCCEEEEEECCC----CTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCE
T ss_pred CC--CeeeEEEccC---CCCCCCEEEEeCCCh----HHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcc
Confidence 33 3344441100 013577766654331 1223999999999998 444446999999998854210
Q ss_pred ---CceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 168 ---AGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 168 ---~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.+.....+.|.|..+..+|+|.|+|.|.|....
T Consensus 274 ~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 274 KTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp ECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred cCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 111122457899999999999999999998765
No 297
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.72 E-value=1.2e-16 Score=134.26 Aligned_cols=170 Identities=13% Similarity=0.107 Sum_probs=110.9
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCc-CCC-----------------CCCceeEec--CCeEEEEEEcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSG-TAP-----------------RPLTSYSIQ--DGSTSVARYTP 76 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~-~l~-----------------~~~~~~~~~--~~~~~~l~i~~ 76 (365)
+....+.+|++++|.|...+.| .+ .+.|+|.... .+. ...+..... ......|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAH-TMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHK 85 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred CCCeEecCCCCEEEEEEecCcccCCc-eEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECC
Confidence 3446789999999999976665 56 8999986421 010 011111111 13345899999
Q ss_pred CCCCCCeEEEEEEEeCCC-----C---CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-
Q psy3823 77 TSELEYGTLLCWARNEQG-----N---QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN- 147 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~~-----~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~- 147 (365)
++.+|+|.|.|.+.+..+ . ....+.|.|... +..+|.+...... ..+.+|+.++|.|.+.+.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~-----~~~~P~v~~~~~~----~~~~~g~~v~L~C~~~g~~ 156 (225)
T 1op3_H 86 MRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPA-----STKGPSVFPLAPS----SKSTSGGTAALGCLVKDYF 156 (225)
T ss_dssp CCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESC-----SCBCCEEEEECCC----TTCCCCCEEEEEEEEEEEB
T ss_pred CChhhCEEEEEEEecCCCccccccceeecCCEEEecccC-----CCcCCeEEEeccc----ccccCCCcEEEEEEEEeEE
Confidence 999999999999998754 1 113567887321 1234655543322 135689999999999986
Q ss_pred CCCCeeEEEeCCeEEee--CC----CCceEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 148 PPYKKLIWTHNGITISN--NA----SAGRIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 148 p~~~~i~W~~~~~~l~~--~~----~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
|.+..+.|++++..+.. .. ..+.......|.|.+...+| |.|+|.|.|..+
T Consensus 157 P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 213 (225)
T 1op3_H 157 PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 213 (225)
T ss_dssp SSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGG
T ss_pred CCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCC
Confidence 66545999998865311 00 11111223568898888888 999999999654
No 298
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.72 E-value=1.3e-16 Score=133.67 Aligned_cols=173 Identities=13% Similarity=0.191 Sum_probs=111.3
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeE---Eee---C-----------CCCceEEe------eceEEEeee
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GIT---ISN---N-----------ASAGRIIT------NQTLVLQSV 182 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~---l~~---~-----------~~~~~~~~------~~~l~i~~~ 182 (365)
..+.+|++++|.|.+.+.+ .+. +.|+++ +.. +.. . ...+.... +.+|.|.++
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (222)
T 1q9r_B 10 GLVQSGGSLRLSCATSGFTFTDYY-MSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTL 88 (222)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSC-EEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred eeEcCCCEEEEEEEecCccCCCCc-EEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcC
Confidence 3578999999999998764 445 999984 221 100 0 01122221 348999999
Q ss_pred cCCCCeEEEEEEEcCCCC----CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCC-ce
Q psy3823 183 TRHSGGLYACSAINSQGE----GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQA-QY 256 (365)
Q Consensus 183 ~~~d~G~Y~C~~~~~~~~----~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~ 256 (365)
+..|+|.|.|.+.+..+. .......|.|... ...+|.+........ +..|+.++|.|.+.+. |.| .
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~------~~~~P~i~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~- 160 (222)
T 1q9r_B 89 RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAA------KTTPPSVYPLAPGSA-AQTNSMVTLGCLVKGYFPEPVT- 160 (222)
T ss_dssp CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSS------CCBCCEEEEECCCSC-CCCSSEEEEEEEEEEEBSSCCE-
T ss_pred CcccCeEEEEEEeccCCcccceEeCCceEEEeccC------CCCCCeEEEcccccc-ccCCCcEEEEEEEccEECCCCE-
Confidence 999999999999987641 2223456777610 012344433221111 5679999999999986 877 6
Q ss_pred eEEEeCCCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEE
Q psy3823 257 FTWAFNNSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCT 313 (365)
Q Consensus 257 ~~W~~~~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 313 (365)
+.|+++|...... .......++. .+.|.|.++..+| |.|+|.|.|..|.......
T Consensus 161 v~W~~~g~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~ 218 (222)
T 1q9r_B 161 VTWNSGSLSSGVH-TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKK 218 (222)
T ss_dssp EEEGGGTBCTTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EEEecCCeEcceE-eccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEe
Confidence 9999987642211 0111112222 3468999999889 9999999999987654433
No 299
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.72 E-value=1e-16 Score=133.00 Aligned_cols=168 Identities=16% Similarity=0.246 Sum_probs=108.5
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeEEe----eC----------CCCceEEe------eceEEEeeecCC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GITIS----NN----------ASAGRIIT------NQTLVLQSVTRH 185 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~l~----~~----------~~~~~~~~------~~~l~i~~~~~~ 185 (365)
..+.+|++++|.|.+.+.+ .+. +.|+++ +..+. .. ...+.... +.+|.|.+++..
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 88 (210)
T 3d9a_H 10 SLVKPSQTLSLTCSVTGDSITSDY-WSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTE 88 (210)
T ss_dssp SEECTTSCEEEEEEEESSCGGGSC-EEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEecCCCcEEEEEEEecccCCCCc-EEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcc
Confidence 3678999999999999865 244 999984 32221 00 01122221 238999999999
Q ss_pred CCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCC-ceeEEEeCC
Q psy3823 186 SGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQA-QYFTWAFNN 263 (365)
Q Consensus 186 d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~~W~~~~ 263 (365)
|+|.|.|.+.+.. .......|.|.. ....+|.+....... .+..|+.++|.|.+.+. |.| . +.|++++
T Consensus 89 D~G~Y~C~~~~~~--~~~~~~~l~V~~------~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~-v~W~~~~ 158 (210)
T 3d9a_H 89 DTATYYCANWDGD--YWGQGTLVTVSA------AKTTPPSVYPLAPGS-AAQTNSMVTLGCLVKGYFPEPVT-VTWNSGS 158 (210)
T ss_dssp GCEEEEEEETTSS--CBCCCEEEEECC------CCCBCCEEEEECCTT-SCCCSSEEEEEEEEEEEBSSCCE-EEEGGGT
T ss_pred cCEEEEEEEecCc--ccccceEEEecc------CCCCCCEEEEecCCc-ccccCCcEEEEEEEeeEecCCcE-EEEeeCC
Confidence 9999999999864 222345666651 001244444222111 26789999999999987 777 6 9999987
Q ss_pred CCCCCCCCceeEeeCC---CEEEEEEcCCCcccCeEEEEEEEcCCcccee
Q psy3823 264 SDTAPRPLTSYSIQDG---STSVARYTPTSELEYGTLLCWARNEQGSQRT 310 (365)
Q Consensus 264 ~~~~~~~~~~~~~~~~---~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 310 (365)
.......... ...++ ..+.|.|..+..+| |.|+|.|.|..|....
T Consensus 159 ~~~~~~~~~~-~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 159 LSSGVHTFPA-VLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp BCTTEEECCC-EEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred cccceEEcCC-ccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 6421111111 11122 23568999888767 9999999999887643
No 300
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.72 E-value=3.6e-16 Score=133.41 Aligned_cols=171 Identities=12% Similarity=0.110 Sum_probs=106.4
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCC-----eEEeeC-------CCCceEEe----eceEEEeeecCCCCeEEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNG-----ITISNN-------ASAGRIIT----NQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~-----~~l~~~-------~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+.+|++|+|.|.+.+.|.+. +.|+++. ..+... ...+.... ..+|.|.+++.+|+|.|.|.
T Consensus 14 ~~v~~G~~v~L~C~~~~~~~~~-i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 92 (250)
T 3esu_F 14 LSASLGDRVTISCRASQDIRNY-LNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFCQ 92 (250)
T ss_dssp EEECTTCCEEEEEEESSCCTTC-EEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEeeCCCcEEEEEEecccCCce-EEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEEE
Confidence 3578999999999999888886 9999842 111100 01112111 23799999999999999999
Q ss_pred EEcCCCCCCcccEEEEEeeeeecc------c---ccCCCCceecCccceeeeecCceEEEEEEEeeeC--CCceeEEEeC
Q psy3823 194 AINSQGEGGSTPFDLNINKMVNLI------F---NSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANP--QAQYFTWAFN 262 (365)
Q Consensus 194 ~~~~~~~~~s~~~~l~v~~~~~~~------~---~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~~W~~~ 262 (365)
+.|..+........|.|..+.... . .....+.....+.. ..+.+|+.++|.|.+.+.| .+. +.|+++
T Consensus 93 ~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~G~~v~L~C~~~~~~~~~~~-v~W~k~ 170 (250)
T 3esu_F 93 QGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGP-ELVKPGASVKISCKDSGYAFSSSW-MNWVKQ 170 (250)
T ss_dssp ECSSSSCEECCCEEEEEC------------------------CEECCC-EEECTTCCEEEEEECCSTTGGGSE-EEEEEE
T ss_pred EeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCc-eEEcCCceEEEEEEecCCcccCCE-EEEEEE
Confidence 998766544345567776110000 0 00001111122222 3388999999999998866 566 999997
Q ss_pred CCCCCCC------------------CCceeEe--eCCCEEEEEEcCCCcccCeEEEEEEEc
Q psy3823 263 NSDTAPR------------------PLTSYSI--QDGSTSVARYTPTSELEYGTLLCWARN 303 (365)
Q Consensus 263 ~~~~~~~------------------~~~~~~~--~~~~~s~l~i~~v~~~d~G~Y~C~a~n 303 (365)
....... ..+.... .......|.|.+++.+|+|.|.|.|.|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 171 RPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp CTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 3211110 0122221 124456799999999999999999997
No 301
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.72 E-value=3.8e-17 Score=137.87 Aligned_cols=172 Identities=13% Similarity=0.187 Sum_probs=112.3
Q ss_pred ceEEEEecCCcEEEEEEeCC-CCC-cceEEEEeCCCcCC-CCCCcee-EecCC---eEEEEEEccCCCCCCeEEEEEEEe
Q psy3823 19 QRIYGALRNEQVLVSCTVDA-NPQ-AQYFTWAFNNSGTA-PRPLTSY-SIQDG---STSVARYTPTSELEYGTLLCWARN 91 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~-~p~-~~~v~W~~~~~~~l-~~~~~~~-~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~ 91 (365)
+....+.+|+.++|.|.+.+ .|. +..++|++++.. + ....... ...++ ..+.|.|.+++.+|.|.|+|.+.+
T Consensus 20 p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~-~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~ 98 (231)
T 2w59_A 20 PSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSG-NLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQH 98 (231)
T ss_dssp CCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSS-CCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEEC
T ss_pred cChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCee-ccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEc
Confidence 33344678999999999655 463 239999999987 5 3322211 11222 234799999999999999999998
Q ss_pred CCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEEeCCeEEeeCCC---
Q psy3823 92 EQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWTHNGITISNNAS--- 167 (365)
Q Consensus 92 ~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~~~~l~~~~~--- 167 (365)
..+. ..+.+.|.... ....+|.+.+..... .. ..|+.++|.|.+.|. |+...|.|++||..+.....
T Consensus 99 ~~~~--~~~~~~v~~~~---~~~~~P~v~v~~~~~---~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 169 (231)
T 2w59_A 99 EELP--LPLSKSVYRNT---GPTTPPLIYPFAPHP---EE-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTT 169 (231)
T ss_dssp TTCS--SCEEEEECCCC---SCCBCCEEEEECCCG---GG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEEC
T ss_pred CCCC--CceEEEEecCC---CCCcCCEEEEeCCCH---HH-hccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccC
Confidence 7654 34445541100 012467766554321 12 235679999999985 43355999999998854320
Q ss_pred --------------C-ceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 168 --------------A-GRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 168 --------------~-~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
. +.....+.|.|.....+|.|.|+|.|.|....
T Consensus 170 ~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 170 AVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp CCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred ccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 0 11112346778888888899999999998754
No 302
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.72 E-value=3.6e-16 Score=130.86 Aligned_cols=171 Identities=14% Similarity=0.144 Sum_probs=111.3
Q ss_pred eEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-CC------C-------------CCceeEe--cCCeEEEEEEc
Q psy3823 20 RIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-AP------R-------------PLTSYSI--QDGSTSVARYT 75 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l~------~-------------~~~~~~~--~~~~~~~l~i~ 75 (365)
....+.+|++++|.|...+.+ .. .+.|||..... .. . ..+.... .......|.|.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 86 (221)
T 3m8o_H 8 GGGLVQPGGSLKLSCAASGFTLSGS-NVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMN 86 (221)
T ss_dssp SCEEECTTCCEEEEEEEESSCGGGS-EEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEEC
T ss_pred CCEEEcCCCCEEEEEEccccccccc-EEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEEC
Confidence 346689999999999965533 45 99999853210 00 0 0111111 12344579999
Q ss_pred cCCCCCCeEEEEEEEeCCC--CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCC-CC
Q psy3823 76 PTSELEYGTLLCWARNEQG--NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPP-YK 151 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~--~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~-~~ 151 (365)
+++.+|+|.|.|.+.+... .......|.|.. .+..+|.+...... .. .+|+.++|.|.+.+ .|. +.
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~-----~~~~~p~v~~~~~~----~~-~~g~~v~L~C~~~~~~P~~~~ 156 (221)
T 3m8o_H 87 SLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSS-----ASPTSPKVFPLSLC----ST-QPDGNVVIACLVQGFFPQEPL 156 (221)
T ss_dssp SCCGGGCEEEEEEEESCTTCCCBBCCEEEEECS-----CCCBCCEEEEEECC----SC-CCTTEEEEEEEEEEEBSSCSE
T ss_pred CCCHHHCEEEEEEEECCChhheECCCEEEEEec-----CCCCCCeEEEecCc----cc-ccCCCEEEEEEEEeeECCCCE
Confidence 9999999999999988642 222556777731 11235655422211 12 68999999999998 665 44
Q ss_pred eeEEEeCCeEEeeCC-------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCC
Q psy3823 152 KLIWTHNGITISNNA-------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEG 201 (365)
Q Consensus 152 ~i~W~~~~~~l~~~~-------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 201 (365)
.+.|+++|..+.... ..+.......|.|.....+|+|.|+|.+.|..+..
T Consensus 157 ~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 157 SVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp EEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred EEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 599999987663211 11112223468899999999999999999987643
No 303
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.72 E-value=3.7e-17 Score=132.30 Aligned_cols=152 Identities=14% Similarity=0.187 Sum_probs=101.7
Q ss_pred ceEEEEecCCcEEEEEEeCC-CCCcceEEEEeCC-CcCCC---C--------CC-ceeEecCCeEEEEEEccCCCCCCeE
Q psy3823 19 QRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNN-SGTAP---R--------PL-TSYSIQDGSTSVARYTPTSELEYGT 84 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~-~p~~~~v~W~~~~-~~~l~---~--------~~-~~~~~~~~~~~~l~i~~~~~~d~G~ 84 (365)
...+.+.+|++++|.|.... .+.+ .+.|+|++ .. +. . .. ..+...+....+|.|.+++.+|+|.
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~-~i~W~k~~~~~-i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~ 83 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQ-RLTWLHTTNQK-ILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGD 83 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCS-EEEEESSSSCE-EEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEE
T ss_pred cceEEEEeCCCEEEeCCCCCCCcee-EEEEEecCCeE-EEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeE
Confidence 45677899999999999633 3356 99999952 21 11 0 00 0011111112379999999999999
Q ss_pred EEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEee
Q psy3823 85 LLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISN 164 (365)
Q Consensus 85 Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~ 164 (365)
|+|.+.+.. .....+.|.|... ...|.+.. .++.++|.|.+...|.+. +.|++++..+..
T Consensus 84 Y~C~v~~~~-~~~~~~~L~V~~~------~~~P~i~~------------~~~~v~L~C~~~~gp~p~-i~W~~~~~~l~~ 143 (180)
T 2dru_A 84 YYMRMLHET-EDQWKITMEVYEM------VSKPMIYW------------ECSNATLTCEVLEGTDVE-LKLYQGKEHLRS 143 (180)
T ss_dssp EEEEEESSS-EEEEEEEEEEECC------CCCCEEEE------------EGGGTEEEEECSSCTTCE-EEEEETTEEEEE
T ss_pred EEEEEEcCC-eEEEEEEEEEECC------CCCCEEEe------------cCCCEEEEEEeCCCCCCE-EEEEECCeECcC
Confidence 999998765 4447778888311 22344332 345699999994337666 999999998851
Q ss_pred CCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCC
Q psy3823 165 NASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEG 201 (365)
Q Consensus 165 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 201 (365)
..+.+|.+.. .+|+|.|+|.|.|..+..
T Consensus 144 -------~~~~~l~~~~--~~d~g~Y~C~a~N~~~~~ 171 (180)
T 2dru_A 144 -------LRQKTMSYQW--TNLRAPFKCKAVNRVSQE 171 (180)
T ss_dssp -------ESSSEEEEEC--SCCSSCEEEEEEETTEEE
T ss_pred -------CCCCEEEEEE--hhcCccEEEEEecCcCcc
Confidence 2234565533 789999999999998754
No 304
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.72 E-value=4.2e-17 Score=130.80 Aligned_cols=149 Identities=11% Similarity=0.096 Sum_probs=102.3
Q ss_pred eEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCC-C---------ceeEecCCeEEEEEEccCCCCCCeEEEEEE
Q psy3823 20 RIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRP-L---------TSYSIQDGSTSVARYTPTSELEYGTLLCWA 89 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~-~---------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 89 (365)
..+.+.+|++++|.|... .|.+ .+.|++++.. +..- . ..+........+|.|.+++.+|+|.|+|.+
T Consensus 3 ~~v~~~~G~~VtL~c~~~-~~~~-~i~W~~~~~~-i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~ 79 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSN-VPLK-EVLWKKQKDK-VAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMES 79 (171)
T ss_dssp EEEEEETTCCEEECCCCS-SCCS-CEEEEETTEE-EEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEEC
T ss_pred cEEEEEcCCCEEEcCCCC-CCcc-eEEEEeCCcE-EEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEE
Confidence 346688999999999974 4777 9999998764 3110 0 001111111137999999999999999999
Q ss_pred EeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCc
Q psy3823 90 RNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAG 169 (365)
Q Consensus 90 ~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~ 169 (365)
.+..+ ...+.|.|... ...|.+..... ...|.|.+.+.|.+. +.|+++|..+.....
T Consensus 80 ~n~~~--~~~~~L~V~~~------~~~p~i~~~~~------------~~~L~C~~~~~p~p~-i~W~~~~~~l~~~~~-- 136 (171)
T 1ccz_A 80 PNITD--TMKFFLYVLEM------VSKPMIYWECS------------NATLTCEVLEGTDVE-LKLYQGKEHLRSLRQ-- 136 (171)
T ss_dssp TTCCS--CEEEEEEEECC------CCCCEEEEETT------------TTEEEEECSSCSSCE-EEEEETTEEEEEESS--
T ss_pred eCCCC--cEEEEEEEECc------CCCCEEEEecC------------CcEEEEEeCCCCCcE-EEEEECCEECcCCcc--
Confidence 88766 57778888321 22344443210 127999999888776 999999998864221
Q ss_pred eEEeeceEEEeeecCCCCeEEEEEEEcCCCCC
Q psy3823 170 RIITNQTLVLQSVTRHSGGLYACSAINSQGEG 201 (365)
Q Consensus 170 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 201 (365)
..+.+. ..+|.|.|+|.|.|..+..
T Consensus 137 -----~~l~~~--~~~~~g~Y~C~a~N~~~~~ 161 (171)
T 1ccz_A 137 -----KTMSYQ--WTNLRAPFKCKAVNRVSQE 161 (171)
T ss_dssp -----SEEEEE--CSCCSSCEEEEEEETTEEE
T ss_pred -----eEEEEe--ccCCCceEEEEEEcccCcc
Confidence 233333 4788999999999998754
No 305
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.71 E-value=4.2e-16 Score=135.34 Aligned_cols=177 Identities=12% Similarity=0.071 Sum_probs=114.2
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-C-------------CC----CCceeEe-cCCeEEEEEEccCC
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-A-------------PR----PLTSYSI-QDGSTSVARYTPTS 78 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l-------------~~----~~~~~~~-~~~~~~~l~i~~~~ 78 (365)
.+..+.+.+|++++|.|...+.|.+ .+.|+|++... . .. ..+.... .......|.|.+++
T Consensus 30 ~p~~v~v~~G~~v~L~C~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 108 (279)
T 2wbj_D 30 HPSWVISKSGTSVKIECRSLDFQAT-TMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAH 108 (279)
T ss_dssp ECSEEEEETTSCEEEEEEESSSCEE-EEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCC
T ss_pred CCCeEEecCCCeEEEEEEeCCCCCC-eEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCC
Confidence 3556789999999999998777777 99999975210 1 00 0111111 12345689999999
Q ss_pred CCCCeEEEEEEEeCCCC------CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCC-C
Q psy3823 79 ELEYGTLLCWARNEQGN------QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPY-K 151 (365)
Q Consensus 79 ~~d~G~Y~C~a~~~~~~------~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~-~ 151 (365)
.+|+|.|+|.+.+..+. ......|+|..... ...+|.+.+.... ...+.+|+.++|.|.+.+.+++ .
T Consensus 109 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~---~~~~P~v~~~~~~---~~~~~~g~~v~L~C~~~g~~P~~~ 182 (279)
T 2wbj_D 109 PEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLK---NVFPPEVAVFEPS---EAEISHTQKATLVCLATGFYPDHV 182 (279)
T ss_dssp GGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGG---GCBCCEEEEEECC---HHHHHHHSCCEEEEEEEEEBSSCE
T ss_pred ccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCC---CCCCCEEEEECCC---cccccCCCceEEEEEEeeEcCCCc
Confidence 99999999999984321 11346677732100 0136766654322 1245579999999999986443 4
Q ss_pred eeEEEeCCeEEeeCC-------------CCceEEeeceEEEeeecCC-CCeEEEEEEEcCCCCC
Q psy3823 152 KLIWTHNGITISNNA-------------SAGRIITNQTLVLQSVTRH-SGGLYACSAINSQGEG 201 (365)
Q Consensus 152 ~i~W~~~~~~l~~~~-------------~~~~~~~~~~l~i~~~~~~-d~G~Y~C~~~~~~~~~ 201 (365)
.+.|++||.++.... ..+.......|.|...... +.|.|+|.+.|.....
T Consensus 183 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 183 ELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp EEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred EEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 599999998875321 1111122345777776664 4788999999976543
No 306
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.71 E-value=7.7e-16 Score=133.88 Aligned_cols=184 Identities=15% Similarity=0.185 Sum_probs=113.6
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeCC--eEEe---e------------CCCCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHNG--ITIS---N------------NASAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~~--~~l~---~------------~~~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++|+|.|.+.+.+ .+. +.|++++ ..+. . ....+.... ..+|.|.+++.
T Consensus 36 ~~v~~G~~v~L~C~~~g~~~~~~~-v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 114 (282)
T 1qok_A 36 ELVRSGTSVKLSCTASGFNIKDSY-MHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTS 114 (282)
T ss_dssp EEEETTCCEEEEEEEESSCGGGSC-EEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEEeCCCeEEEEEeccCCCCCCce-EEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCCh
Confidence 4678999999999998865 345 9999843 2111 0 001122221 25799999999
Q ss_pred CCCeEEEEEEEcCCCC----CCcccEEEEEeeeeec-----ccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCc
Q psy3823 185 HSGGLYACSAINSQGE----GGSTPFDLNINKMVNL-----IFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQ 255 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~----~~s~~~~l~v~~~~~~-----~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 255 (365)
+|+|.|.|.+.|..|. .....+.|.|...... ......++.+...+ ....+.+|+.++|.|.+.+.| +.
T Consensus 115 ~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~G~~v~L~C~~~~~~-~~ 192 (282)
T 1qok_A 115 EDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSP-AIMSASPGEKVTITCSASSSV-SY 192 (282)
T ss_dssp GGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEEC-SEEEECTTCCEEEEEEESSCC-SC
T ss_pred hhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCC-CEEEEcCCCcEEEEEEecCCC-ce
Confidence 9999999999998652 1123456777710000 00000012222222 223388999999999999888 77
Q ss_pred eeEEEe--CCCCCC-----------CCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcc-ceecEEEEEE
Q psy3823 256 YFTWAF--NNSDTA-----------PRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGS-QRTPCTFHVV 317 (365)
Q Consensus 256 ~~~W~~--~~~~~~-----------~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~ 317 (365)
+.|++ +|.... ....++....++....|.|.+++.+|+|.|.|.|.|..+. ......|.|.
T Consensus 193 -v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 193 -MHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp -CEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred -EEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEe
Confidence 99999 443220 0012222233445667999999999999999999985432 1233455554
No 307
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.71 E-value=1e-17 Score=141.51 Aligned_cols=176 Identities=10% Similarity=0.119 Sum_probs=110.1
Q ss_pred cceecCCcEEEEEEEEecCC-CCeeEEEeC--CeEE---ee-------CCCCceEEe----eceEEEeeecCCCCeEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPP-YKKLIWTHN--GITI---SN-------NASAGRIIT----NQTLVLQSVTRHSGGLYAC 192 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~-~~~i~W~~~--~~~l---~~-------~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C 192 (365)
..+.+|++++|.|.+.+.++ +..+.|+++ +..+ .. ....+.... +.+|.|.+++.+|+|.|.|
T Consensus 29 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 108 (234)
T 2j6e_L 29 ASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC 108 (234)
T ss_dssp CCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEEE
T ss_pred EEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEEE
Confidence 46789999999999987543 424999985 3221 10 001122211 3489999999999999999
Q ss_pred EEEcCCCC--CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeCCCCCCCC
Q psy3823 193 SAINSQGE--GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNSDTAPR 269 (365)
Q Consensus 193 ~~~~~~~~--~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~ 269 (365)
.+.+..+. .......|.|.. ....+|.+........ ...|+.++|.|.+.+.+++ ..+.|+++|......
T Consensus 109 ~~~~~~~~~~~~~~~~~l~V~~------~~~~~p~v~~~~~~~~-~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 181 (234)
T 2j6e_L 109 ATWDDSLSAVIFGGGTKLTVLG------QPKAAPSVTLFPPSSE-ELQANKATLVCLISDFFPGAVTVAWKADGAPVKAG 181 (234)
T ss_dssp EEEETTTTEEEECCCBCCCBCC------CCCCCCCCCEECCCHH-HHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSS
T ss_pred EEEcCCcceeEecCCEEEEEec------CCCCCCcccccCCChh-HhcCCceEEEEEEEEEcCCceEEEEEECCEECCCC
Confidence 99988762 111233445530 0003444432221111 3468899999999986443 249999988754322
Q ss_pred CCce--eEeeCC---CEEEEEEcCCCcccCeEEEEEEEcCCccceecE
Q psy3823 270 PLTS--YSIQDG---STSVARYTPTSELEYGTLLCWARNEQGSQRTPC 312 (365)
Q Consensus 270 ~~~~--~~~~~~---~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 312 (365)
.... ....++ ..+.|.|.++..+|+|.|+|.|.|..+..+.++
T Consensus 182 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 182 VETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp EEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred ccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 1100 011122 235799999999999999999999988765543
No 308
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.71 E-value=6.6e-17 Score=134.80 Aligned_cols=170 Identities=12% Similarity=0.136 Sum_probs=107.2
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeCC--eEEe----------eCCCCceEEe----eceEEEeeecCCCCeEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHNG--ITIS----------NNASAGRIIT----NQTLVLQSVTRHSGGLYA 191 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~~--~~l~----------~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~ 191 (365)
..+.+|++++|.|.+.+.+ .+. +.|++++ ..+. .....+.... ..+|.|.+++..|+|.|.
T Consensus 10 ~~v~~G~~v~L~C~v~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 88 (216)
T 2xzc_L 10 VSAAPGQKVTISCSGSSSNIGNNY-VSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYY 88 (216)
T ss_dssp EEECTTCCEEEEEECCTTTGGGSC-CEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred EEecCCCeEEEEEEeecCCCCCCe-EEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEE
Confidence 3578999999999954333 344 9999843 2211 0001122221 347999999999999999
Q ss_pred EEEEcCCC-CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCCCCCCCC
Q psy3823 192 CSAINSQG-EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSDTAPR 269 (365)
Q Consensus 192 C~~~~~~~-~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~~~~~~ 269 (365)
|.+.|..+ ........|.|.. ...+|.+........ ...|+.++|.|.+.+. |++..+.|+++|......
T Consensus 89 C~~~~~~~~~~~~~~~~l~V~~-------~~~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~ 160 (216)
T 2xzc_L 89 CGTWDSSLNPVFGGGTKLEIKR-------TVAAPSVFIFPPSDE-QLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 160 (216)
T ss_dssp EEEECTTSCEEEBCCEEEEECC-------CCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred EEEEeCCCcceECCCEEEEEcC-------CCCCCceEEeCCChh-hccCCcEEEEEEEEeEcCCceEEEEEECCeecCCC
Confidence 99999876 2222345566651 113455443222111 3468899999999985 444249999988744322
Q ss_pred -CCceeE--eeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 270 -PLTSYS--IQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 270 -~~~~~~--~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
...... ..++. .+.|.|..+..+|+|.|+|.|.|.....
T Consensus 161 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 161 SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred eeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 010111 12222 3479999999999999999999987654
No 309
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.71 E-value=4.3e-16 Score=134.45 Aligned_cols=175 Identities=11% Similarity=0.207 Sum_probs=106.1
Q ss_pred ceEEEEecCCcEEEEEEeCCCC-----CcceEEEEeCCCcC-CC------------CCCceeEecCCeEEEEEEccCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP-----QAQYFTWAFNNSGT-AP------------RPLTSYSIQDGSTSVARYTPTSEL 80 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p-----~~~~v~W~~~~~~~-l~------------~~~~~~~~~~~~~~~l~i~~~~~~ 80 (365)
+..+.+.+|++++|.|...+.+ .+ .+.|+|..... +. ...+...........|.|.+++.+
T Consensus 22 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~-~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 100 (268)
T 1x9q_A 22 PLSLPVSLGDQASISCRSSQSLVHSNGNT-YLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAE 100 (268)
T ss_dssp CSEECCCTTCCEEEEEEESSCCBCTTSCB-CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCeEEecCCCCEEEEeEecCCcccccCCc-eEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChh
Confidence 4567789999999999977776 36 99999864210 10 011112222334458999999999
Q ss_pred CCeEEEEEEEeCCCCC-cccEEEEEEeccccCCCCCCCe-------------EEEEcCCccCccceecCCcEEEEEEEEe
Q psy3823 81 EYGTLLCWARNEQGNQ-RTPCTFHVVKAGECEHPVDKPS-------------VQIKLGRNLNASVLNEGVDIYFDCHIQA 146 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~~-~~~~~l~V~~~~~~~~~~~~p~-------------~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 146 (365)
|+|.|.|.+.+..+.. .....|.|........|..+|. +.+... ....+.+|++++|.|.+.+
T Consensus 101 DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~---~~~~v~~G~~v~L~C~~~~ 177 (268)
T 1x9q_A 101 DLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDET---GGGLVQPGGAMKLSCVTSG 177 (268)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEE---CCEEECTTCCEEEEEEEES
T ss_pred HCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECC---CceEecCCCcEEEEEEecC
Confidence 9999999998865422 1345666632111000111221 122211 2346889999999999988
Q ss_pred cCC-CCeeEEEeC--CeEEe---e--------------CCCCceEEe------eceEEEeeecCCCCeEEEEEEEcC
Q psy3823 147 NPP-YKKLIWTHN--GITIS---N--------------NASAGRIIT------NQTLVLQSVTRHSGGLYACSAINS 197 (365)
Q Consensus 147 ~p~-~~~i~W~~~--~~~l~---~--------------~~~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~ 197 (365)
.++ ...+.|+++ +..+. . ....+.... ..+|.|.+++.+|+|.|+|.+.+.
T Consensus 178 ~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 178 FTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp SCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred ccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 653 234999984 33221 0 011122221 257999999999999999999874
No 310
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.71 E-value=7.5e-16 Score=131.17 Aligned_cols=172 Identities=14% Similarity=0.068 Sum_probs=106.7
Q ss_pred cceecCCcEEEEEEEEecC-----CCCeeEEEeC--CeE---EeeC-------CCCceEEe----eceEEEeeecCCCCe
Q psy3823 130 SVLNEGVDIYFDCHIQANP-----PYKKLIWTHN--GIT---ISNN-------ASAGRIIT----NQTLVLQSVTRHSGG 188 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p-----~~~~i~W~~~--~~~---l~~~-------~~~~~~~~----~~~l~i~~~~~~d~G 188 (365)
..+.+|++++|.|.+.+.+ .+. +.|+++ +.. +... ...+.... ..+|.|.+++.+|+|
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 89 (247)
T 1svz_A 11 LPVSLGDQASISCRSSQTIVHNNGNTY-LEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLG 89 (247)
T ss_dssp EEECTTCCEEEEEEESSCCBCTTSCBC-EEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EEecCCCCEEEEEeCCCcccccCCCce-EEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHCE
Confidence 4678999999999998876 344 999983 221 1110 01122211 347999999999999
Q ss_pred EEEEEEEcCCCCCCcccEEEEEeeeeec---ccccCCCCceecCccceeeeecCceEEEEEEEeeeC--CCceeEEEeCC
Q psy3823 189 LYACSAINSQGEGGSTPFDLNINKMVNL---IFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNN 263 (365)
Q Consensus 189 ~Y~C~~~~~~~~~~s~~~~l~v~~~~~~---~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~~W~~~~ 263 (365)
.|.|.+.+..+........|.|..+... ......++.......... +..|+.++|.|.+.+.+ .+. +.|++++
T Consensus 90 ~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~G~~v~L~C~~~~~~~~~~~-v~W~k~~ 167 (247)
T 1svz_A 90 IYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPEL-KKPGETVKISCKATNYAFTDYS-MHWVKQA 167 (247)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEE-ECTTCCEEEEEEEESSCGGGSC-EEEEEEC
T ss_pred EEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCcee-ecCCCcEEEEEEEcCcccCCcE-EEEEEeC
Confidence 9999999876543334466777611000 000000111222222223 88999999999998875 455 9999964
Q ss_pred CCCCC------------------CCCceeEe--eCCCEEEEEEcCCCcccCeEEEEEEEcC
Q psy3823 264 SDTAP------------------RPLTSYSI--QDGSTSVARYTPTSELEYGTLLCWARNE 304 (365)
Q Consensus 264 ~~~~~------------------~~~~~~~~--~~~~~s~l~i~~v~~~d~G~Y~C~a~n~ 304 (365)
..... ...+.... .......|.|.+++.+|+|.|.|.|.|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 168 PGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp TTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 21110 01122221 1344568999999999999999999985
No 311
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.71 E-value=5.8e-17 Score=135.48 Aligned_cols=180 Identities=18% Similarity=0.184 Sum_probs=113.1
Q ss_pred CCCCeEEEEcCCccCccc-eecCCcEEEEEEEEecC---CCCeeEEEeCCeEEeeCC-------CCceEEeeceEEEeee
Q psy3823 114 VDKPSVQIKLGRNLNASV-LNEGVDIYFDCHIQANP---PYKKLIWTHNGITISNNA-------SAGRIITNQTLVLQSV 182 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~-~~~g~~v~l~C~~~~~p---~~~~i~W~~~~~~l~~~~-------~~~~~~~~~~l~i~~~ 182 (365)
..+|.+.+.+.+. .. +.+|++++|.|.+.+.+ +...|.|++++..+.... ..........|.|.++
T Consensus 7 ~~~p~v~~~pp~~---~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~ 83 (218)
T 2rgs_A 7 EGGPSVFIFPPNI---KDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQ 83 (218)
T ss_dssp --CCEEEEECCCH---HHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHH
T ss_pred CCCCEEEEECcCH---HHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHH
Confidence 4567777765431 12 78999999999999873 334599999998764211 0111223457999999
Q ss_pred cCCCCeEEEEEEEcCCCCCC-cccEEE--EEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCCceeE
Q psy3823 183 TRHSGGLYACSAINSQGEGG-STPFDL--NINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFT 258 (365)
Q Consensus 183 ~~~d~G~Y~C~~~~~~~~~~-s~~~~l--~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~ 258 (365)
+.+|+|.|+|.+.|..+... ...+.+ .+. .+|.+........ ...|+.++|.|.+.| +|.+..+.
T Consensus 84 ~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~----------~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~ 152 (218)
T 2rgs_A 84 DWMSGKEFKCKVNNKDLPSPIERTISKIKGLV----------RAPQVYILPPPAE-QLSRKDVSLTCLVVGFNPGDISVE 152 (218)
T ss_dssp HHHTTCCEEEEEEETTCSSCEEEEECCCCCCC----------BCCEEEEECCCGG-GTTSSEEEEEEEEEEEBSSCCEEE
T ss_pred HcCCCCeEEEEEECCcCCCcceEEEeecCCCC----------CCCEEEEECCChH-HhcCCceEEEEEEEeeeCCCcEEE
Confidence 99999999999999876431 111111 222 5666543222211 235899999999998 56552499
Q ss_pred EEeCCCCCCCCCCce--eEeeCCCE---EEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 259 WAFNNSDTAPRPLTS--YSIQDGST---SVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 259 W~~~~~~~~~~~~~~--~~~~~~~~---s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
|+++|..... .... ....++.. +.|.|.....+|.|.|+|.|.|.....
T Consensus 153 W~k~g~~~~~-~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~~ 206 (218)
T 2rgs_A 153 WTSNGHTEEN-YKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLKN 206 (218)
T ss_dssp EEETTEEECC-EEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSGG
T ss_pred EEECCEeccC-ceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCCC
Confidence 9999874321 1111 11234433 335565555567999999999987653
No 312
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.71 E-value=3.1e-16 Score=134.43 Aligned_cols=174 Identities=15% Similarity=0.180 Sum_probs=108.1
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeC--CeE---EeeC--------CCCceEE------eeceEEEeeecCCCCeEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHN--GIT---ISNN--------ASAGRII------TNQTLVLQSVTRHSGGLY 190 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~--~~~---l~~~--------~~~~~~~------~~~~l~i~~~~~~d~G~Y 190 (365)
..+.+|++|+|.|.+.+.+.+. +.|++. +.. +... ...+... ...+|.|.+++.+|+|.|
T Consensus 13 ~~v~~G~~v~L~C~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y 91 (256)
T 3tf7_C 13 VTVSEGASLQLRCKYSYSATPY-LFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVY 91 (256)
T ss_dssp EEEETTSCEEECCEEECSSCCE-EEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEE
T ss_pred EEecCCCeEEEEEEeCCCCCce-EEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEE
Confidence 4678999999999999887766 999982 111 1100 0111111 145799999999999999
Q ss_pred EEEEEcCCCCC---CcccEEEEEeeeee----------cccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCcee
Q psy3823 191 ACSAINSQGEG---GSTPFDLNINKMVN----------LIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYF 257 (365)
Q Consensus 191 ~C~~~~~~~~~---~s~~~~l~v~~~~~----------~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~ 257 (365)
.|.+.+..+.. ......|.|..... .......+|.+...+.. ..+.+|+.++|.|.+.+. .+. +
T Consensus 92 ~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~-~~v~~G~~v~L~C~~~~~-~~~-v 168 (256)
T 3tf7_C 92 FCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRN-KVTVTGENVTLSCRQTNS-HNY-M 168 (256)
T ss_dssp EEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSE-EEEETTCCEEECEEECSC-CSE-E
T ss_pred EEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCE-EEEeCCCcEEEEEEcCCC-ceE-E
Confidence 99999876522 12345666661000 00000023444443333 337799999999999876 566 9
Q ss_pred EEEeCCCCCCCC----------------CCceeEe-eCCCEEEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 258 TWAFNNSDTAPR----------------PLTSYSI-QDGSTSVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 258 ~W~~~~~~~~~~----------------~~~~~~~-~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
.|++.+...... ..++... .......|.|.+++.+|+|.|+|.|.|..|.
T Consensus 169 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 169 YWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp EEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred EEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence 999843211110 0111111 1234457999999999999999999998764
No 313
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.70 E-value=5.9e-17 Score=136.32 Aligned_cols=179 Identities=12% Similarity=0.191 Sum_probs=108.4
Q ss_pred ceecCCcEEEEEEEEecC--CCCeeEEEeCC--eEEe----eC-----------CCCceEE------eeceEEEeeecCC
Q psy3823 131 VLNEGVDIYFDCHIQANP--PYKKLIWTHNG--ITIS----NN-----------ASAGRII------TNQTLVLQSVTRH 185 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~p--~~~~i~W~~~~--~~l~----~~-----------~~~~~~~------~~~~l~i~~~~~~ 185 (365)
.+.+|++|+|.|.+.+.+ .+. +.|+++. ..+. .. ...+... .+.+|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (227)
T 1mju_H 11 LVKPGASVKLSCKASGYTFTNYW-INWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSD 89 (227)
T ss_dssp EECTTCCEEEEEEEESSCGGGSC-EEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEecCCccccce-EEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCcc
Confidence 578999999999998765 445 9999842 2211 00 0112222 1358999999999
Q ss_pred CCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCCC
Q psy3823 186 SGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNS 264 (365)
Q Consensus 186 d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~ 264 (365)
|+|.|.|.+.+..+........|.|... ...+|.+....... .+..|+.++|.|.+.+. |.+..+.|++++.
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~L~V~~~------~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 162 (227)
T 1mju_H 90 DSAVYYCANKLGWFPYWGQGTLVTVSAA------KTTAPSVYPLAPVC-GDTSGSSVTLGCLVKGYFPEPVTLTWNSGSL 162 (227)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEECSS------CCBCCEEEEECCCC-------CEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred cCEEEEEEECCCCceEEcCcEEEEEcCC------CCCCCEEEEecCCc-cccCCCcEEEEEEeecEeCCCeEEEEecCCC
Confidence 9999999999863222223456777610 00234443222111 25679999999999986 6662399999876
Q ss_pred CCCCCCCceeEeeCC---CEEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 265 DTAPRPLTSYSIQDG---STSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 265 ~~~~~~~~~~~~~~~---~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
........... ..+ ..+.|.|..+..+| |.|+|.|.|..+.......+.+..+
T Consensus 163 ~~~~~~~~~~~-~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~ 218 (227)
T 1mju_H 163 SSGVHTFPAVL-QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGP 218 (227)
T ss_dssp CTTEEECCCEE-ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC
T ss_pred cCCcEECCcee-cCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCC
Confidence 42111000111 112 23569999988888 9999999998777655555554433
No 314
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.70 E-value=2.6e-16 Score=135.90 Aligned_cols=174 Identities=11% Similarity=0.115 Sum_probs=112.7
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCC-------CC-----------ceeEe-cCCeEEEEEEccCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPR-------PL-----------TSYSI-QDGSTSVARYTPTSE 79 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~-------~~-----------~~~~~-~~~~~~~l~i~~~~~ 79 (365)
+..+.+.+|++++|.|...+ +.+ .+.|+|.... ... .. +.... ......+|.|.+++.
T Consensus 34 p~~v~v~~G~~v~L~C~~~~-~~~-~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~ 110 (270)
T 3qib_D 34 PRYLVKGQGQKAKMRCIPEK-GHP-VVFWYQQNKN-NEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEA 110 (270)
T ss_dssp CSEEEEETTSCEEEEEECCT-TCC-EEEEEEECTT-CCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCG
T ss_pred CCeEEEcCCCCEEEEEEecC-CCc-eEEEEEECCC-CCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCH
Confidence 34577899999999999754 667 9999994321 100 00 11111 123345899999999
Q ss_pred CCCeEEEEEEEeCCCC----CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeE
Q psy3823 80 LEYGTLLCWARNEQGN----QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLI 154 (365)
Q Consensus 80 ~d~G~Y~C~a~~~~~~----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~ 154 (365)
+|+|.|.|.+.+.... ......|.|..... ...+|.+.+.... ...+.+|+.++|.|.+.+ .|.+..+.
T Consensus 111 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~---~~~~P~v~~~~~~---~~~~~~g~~v~L~C~~~g~~P~~~~v~ 184 (270)
T 3qib_D 111 GDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLK---NVFPPEVAVFEPS---EAEISHTQKATLVCLATGFYPDHVELS 184 (270)
T ss_dssp GGCEEEEEEEESCTTCCCCEECCCEEEEEESCST---TCBCCEEEEEECC---HHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred hHCeEEEEEEecCCCccceEECCcEEEEEccccc---cccCCceEEECCC---ccccccCCceEEEEEecceeCCCeEEE
Confidence 9999999999864322 11445677732100 1225665554322 224556999999999998 55564599
Q ss_pred EEeCCeEEeeCC-------------CCceEEeeceEEEeeecCCC-CeEEEEEEEcCCCCC
Q psy3823 155 WTHNGITISNNA-------------SAGRIITNQTLVLQSVTRHS-GGLYACSAINSQGEG 201 (365)
Q Consensus 155 W~~~~~~l~~~~-------------~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~~ 201 (365)
|+++|..+.... ..+.......|.|.....+| +|.|+|.+.|.....
T Consensus 185 W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~~ 245 (270)
T 3qib_D 185 WWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 245 (270)
T ss_dssp EEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBCT
T ss_pred EEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCCC
Confidence 999999885321 01112223567788777777 999999999876543
No 315
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.70 E-value=1.7e-17 Score=143.43 Aligned_cols=206 Identities=14% Similarity=0.126 Sum_probs=106.4
Q ss_pred CCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEe
Q psy3823 78 SELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTH 157 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~ 157 (365)
++.|.+.|.|.+.+..+.......+.| ..+| ....+.+|++++|.|.+.+ +.+. +.|++
T Consensus 4 ~~~~~~~y~~~~~~~~g~~~~~~~~~v---------~~~p----------~~v~v~~G~~v~L~C~~~~-~~~~-v~W~k 62 (270)
T 3qib_D 4 ERADLIAYLKQATKGGGGSGGGGGMKV---------IQTP----------RYLVKGQGQKAKMRCIPEK-GHPV-VFWYQ 62 (270)
T ss_dssp ------------------------CCC---------EEEC----------SEEEEETTSCEEEEEECCT-TCCE-EEEEE
T ss_pred hhhhHHHHHHHHhccCCccccccceeE---------EeCC----------CeEEEcCCCCEEEEEEecC-CCce-EEEEE
Confidence 456889999999887665443333333 1122 1235789999999998755 4444 99998
Q ss_pred --CCeEEe----eCCC---------C-ceEE-----eeceEEEeeecCCCCeEEEEEEEcCCCC---CCcccEEEEEeee
Q psy3823 158 --NGITIS----NNAS---------A-GRII-----TNQTLVLQSVTRHSGGLYACSAINSQGE---GGSTPFDLNINKM 213 (365)
Q Consensus 158 --~~~~l~----~~~~---------~-~~~~-----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~s~~~~l~v~~~ 213 (365)
.+.... .... . +... .+.+|.|.+++..|+|.|.|.+.+.... .......|.|...
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~ 142 (270)
T 3qib_D 63 QNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLED 142 (270)
T ss_dssp ECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESC
T ss_pred ECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccc
Confidence 221110 0000 0 1111 1457999999999999999999964321 1223456777610
Q ss_pred eecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCCceeEEEeCCCCCCCCCCce-------eEeeCCCE---E
Q psy3823 214 VNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNNSDTAPRPLTS-------YSIQDGST---S 282 (365)
Q Consensus 214 ~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~W~~~~~~~~~~~~~~-------~~~~~~~~---s 282 (365)
. ....+|.+.........+..|+.++|.|.+.+ .|.+..+.|+++|.......... ....++.. +
T Consensus 143 ~----~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s 218 (270)
T 3qib_D 143 L----KNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSS 218 (270)
T ss_dssp S----TTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEE
T ss_pred c----ccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEE
Confidence 0 00014544332222122456999999999998 55552499999876443211000 00123332 4
Q ss_pred EEEEcCCCccc-CeEEEEEEEcCCccc
Q psy3823 283 VARYTPTSELE-YGTLLCWARNEQGSQ 308 (365)
Q Consensus 283 ~l~i~~v~~~d-~G~Y~C~a~n~~g~~ 308 (365)
.|.|.....+| +|.|+|.|.|.....
T Consensus 219 ~L~i~~~~~~d~~g~YtC~v~~~~l~~ 245 (270)
T 3qib_D 219 RLRVSATFWQNPRNHFRCQVQFYGLSE 245 (270)
T ss_dssp EEEEEHHHHHSTTCEEEEEEEECCBCT
T ss_pred EEEEcHHHhccCCCeEEEEEEecCCCC
Confidence 57888877777 999999999987654
No 316
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.70 E-value=1.1e-16 Score=133.91 Aligned_cols=173 Identities=13% Similarity=0.252 Sum_probs=110.0
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeCC--eE---E-eeCC-------------CCceEEe------eceEEEeee
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHNG--IT---I-SNNA-------------SAGRIIT------NQTLVLQSV 182 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~~--~~---l-~~~~-------------~~~~~~~------~~~l~i~~~ 182 (365)
..+.+|++++|.|.+.+.+ .+. +.|++++ .. + .... ..+.... +.+|.|.++
T Consensus 10 ~~~~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (220)
T 1pz5_B 10 GLVQPGGSMKLSCVASGFTFSNYW-MEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNL 88 (220)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSE-EEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred EEEcCCCeEEEEEEEcCCccCCcc-EEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccC
Confidence 3678999999999998765 444 9999842 22 1 1100 1122221 238999999
Q ss_pred cCCCCeEEEEEEEcCCCC--CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCC-ceeE
Q psy3823 183 TRHSGGLYACSAINSQGE--GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQA-QYFT 258 (365)
Q Consensus 183 ~~~d~G~Y~C~~~~~~~~--~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~-~~~~ 258 (365)
+..|+|.|.|.+.+..+. .......|.|.. ....+|.+....... .+..|+.++|.|.+.+. |.| . +.
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~------~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~-v~ 160 (220)
T 1pz5_B 89 RAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSS------ATTTAPSVYPLVPGC-SDTSGSSVTLGCLVKGYFPEPVT-VK 160 (220)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECS------SCCBCCEEEEECCCS-CCSCSSSEEEEEEEEEEBSSCCE-EE
T ss_pred CHHHCEEEEEEEecCCcccceECCCEEEEEcc------CCCCCCeEEEccccc-ccCCCCcEEEEEEEEEEeCCCeE-EE
Confidence 999999999999987532 111345666651 001234443222111 15689999999999987 888 6 99
Q ss_pred EEeCCCCCCCCCCceeEeeCC---CEEEEEEcCCCcccCeEEEEEEEcCCccceecEE
Q psy3823 259 WAFNNSDTAPRPLTSYSIQDG---STSVARYTPTSELEYGTLLCWARNEQGSQRTPCT 313 (365)
Q Consensus 259 W~~~~~~~~~~~~~~~~~~~~---~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 313 (365)
|++++............ ..+ ..+.|.|..+..++ |.|+|.|.|..|..+.++.
T Consensus 161 W~~~~~~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 161 WNYGALSSGVRTVSSVL-QSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp EGGGTCCTTEEECCCEE-ETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EecCCcccceEEcCCcc-cCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 99987631100000000 112 24568998888766 9999999999997765443
No 317
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.70 E-value=3.7e-17 Score=132.33 Aligned_cols=155 Identities=15% Similarity=0.233 Sum_probs=106.7
Q ss_pred cceecCCcEEEEEEEE--ecCCCCeeEEEe--CCeEEee---------CCCCceEEeeceEEEeeecCCCCeEEEEEEEc
Q psy3823 130 SVLNEGVDIYFDCHIQ--ANPPYKKLIWTH--NGITISN---------NASAGRIITNQTLVLQSVTRHSGGLYACSAIN 196 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~--~~p~~~~i~W~~--~~~~l~~---------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 196 (365)
....+|++|+|.|... +.+.+ .|.|++ ++..+.. .........+++|.|.+++..|+|.|+|.+.|
T Consensus 9 v~g~~G~sv~L~~~~~~~~~~~~-~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n 87 (182)
T 1hnf_A 9 TWGALGQDINLDIPSFQMSDDID-DIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYD 87 (182)
T ss_dssp EEEETTSCEEECCTTCCCCSSEE-EEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEE
T ss_pred EEEecCCCEEEeCCcccccCcCC-EEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEe
Confidence 3567899999999432 22334 499999 8887731 12223344578999999999999999999999
Q ss_pred CCCCCC-cccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeE
Q psy3823 197 SQGEGG-STPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYS 275 (365)
Q Consensus 197 ~~~~~~-s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~ 275 (365)
..|... ...+.|.|..+ ...|.+. ..+..+.|.|.+.+.|.+. +.|+++|... .
T Consensus 88 ~~g~~~~~~~~~L~V~~~-------~~~P~i~---------~~~~~v~L~C~~~~~p~~~-~~W~~~g~~l--~------ 142 (182)
T 1hnf_A 88 TKGKNVLEKIFDLKIQER-------VSKPKIS---------WTCINTTLTCEVMNGTDPE-LNLYQDGKHL--K------ 142 (182)
T ss_dssp TTSCEEEEEEEEEEEECC-------CCCCEEE---------EETTTTEEEEECSSCSSCE-EEEEESSCEE--E------
T ss_pred CCCceeEEEEEEEEEcCc-------CCCCEEE---------EccCcEEEEeEccCCCCCE-EEEEECCEEC--C------
Confidence 887643 24566777611 0123221 1234799999999888887 9999988643 0
Q ss_pred eeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEE
Q psy3823 276 IQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTF 314 (365)
Q Consensus 276 ~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 314 (365)
.... .|.+.. ..+|+|.|+|.|.|..|..+....+
T Consensus 143 ~~~~---~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 143 LSQR---VITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp EESS---CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred CCCc---EEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 1111 133332 4689999999999999988766554
No 318
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.70 E-value=1.4e-16 Score=135.51 Aligned_cols=174 Identities=14% Similarity=0.158 Sum_probs=110.1
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEe----------------CCeEEeeCCC-CceEEe-----eceEEEeeecCCCC
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTH----------------NGITISNNAS-AGRIIT-----NQTLVLQSVTRHSG 187 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~----------------~~~~l~~~~~-~~~~~~-----~~~l~i~~~~~~d~ 187 (365)
..+.+|++++|.|.+.+.+.+. +.|++ ++........ .+.... +.+|.|.+++..|+
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 89 (246)
T 4dzb_B 11 VISKSGTSVKIECRSLDFQATT-MFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 89 (246)
T ss_dssp EEEETTSCEEEEEEESSSCCCS-EEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGC
T ss_pred EEEeCCCcEEEEeEecCCCceE-EEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHC
Confidence 4678999999999999887777 99998 2222221110 112211 34799999999999
Q ss_pred eEEEEEEEcCCC---CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCc-eeEEEeCC
Q psy3823 188 GLYACSAINSQG---EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQ-YFTWAFNN 263 (365)
Q Consensus 188 G~Y~C~~~~~~~---~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~~W~~~~ 263 (365)
|.|.|.+.+..+ ........|.|.... ....+|.+.........+..|+.++|.|.+.+.|++. .+.|+++|
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~----~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g 165 (246)
T 4dzb_B 90 SFYICSARTSGDFGEQFFGPGTRLTVLEDL----KNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 165 (246)
T ss_dssp EEEEEEECCSSGGGCCEECCCEEEEEESCG----GGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred EEEEEEEecCCCCcceEEcCCEEEEEecCC----CcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECC
Confidence 999999987543 122234566766100 0012454433222222255699999999999876652 49999987
Q ss_pred CCCCCCCCceeE-e-------eCCCE---EEEEEcCCCccc-CeEEEEEEEcCCccce
Q psy3823 264 SDTAPRPLTSYS-I-------QDGST---SVARYTPTSELE-YGTLLCWARNEQGSQR 309 (365)
Q Consensus 264 ~~~~~~~~~~~~-~-------~~~~~---s~l~i~~v~~~d-~G~Y~C~a~n~~g~~~ 309 (365)
....... .... . .++.. +.|.|.....+| +|.|+|.|.|......
T Consensus 166 ~~l~~~~-~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 166 KEVHSGV-CTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EEECTTE-EECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EECCCCc-ccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 6433211 1100 0 13332 348888887788 9999999999876654
No 319
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.70 E-value=8.4e-15 Score=121.37 Aligned_cols=240 Identities=12% Similarity=0.170 Sum_probs=149.4
Q ss_pred EEEecCCcEEEEEE-eCCCC---CcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 22 YGALRNEQVLVSCT-VDANP---QAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 22 ~~v~~G~~~~l~C~-~~~~p---~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
-.+..|+.++|.|. ..+.| .. .|+|+|++.. +.... . .|.+......|+|.|+|.+.+..+...
T Consensus 12 ~~i~~GdsVTLTatVaGGkP~pspy-TYqWyKDG~~-IsGaT-------~---tLti~s~t~sdSG~YqCvVTDa~Gcs~ 79 (304)
T 3shs_A 12 RCFLAGDGFTLTATVAGDEPLPSNL-TYTWTKDDQP-HENNT-------A---TLTVADATSENAGSYKVTVQDTDTMTS 79 (304)
T ss_dssp SSBCTTCCEEEEEEEEESSSCCCCE-EEEEEETTEE-CSCCS-------S---EEEESSCCGGGCEEEEEEEEETTTCCE
T ss_pred ccccCCCCEEEEEEecCCCCCCCCc-eEEEEECCcc-ccCCc-------c---eEEeeeccccCCeEEEEEEEECCCCee
Confidence 34678999999999 56666 44 9999999977 54322 2 688888899999999999999887665
Q ss_pred ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEE--Ee-cCC----CCeeEEEeCCeEEeeCCCCce
Q psy3823 98 TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHI--QA-NPP----YKKLIWTHNGITISNNASAGR 170 (365)
Q Consensus 98 ~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~--~~-~p~----~~~i~W~~~~~~l~~~~~~~~ 170 (365)
..-.+.|.. ...+.+.+..+ ....+..|..+.|.+.+ .| .++ ...++|++|+..+...
T Consensus 80 tSs~VtVT~-------~a~l~i~it~P---~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA----- 144 (304)
T 3shs_A 80 VESEVFLME-------EAELIVNITEP---QHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT----- 144 (304)
T ss_dssp EECCCEEEC-------BCCEEEEESSC---SEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS-----
T ss_pred eeeeEEEec-------cCceeEEecCC---CceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc-----
Confidence 222333311 11223222221 12234567889999988 43 332 2459999999877532
Q ss_pred EEeeceEEEeeecCCCCeEEEEEEEcCCC-CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEe
Q psy3823 171 IITNQTLVLQSVTRHSGGLYACSAINSQG-EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVD 249 (365)
Q Consensus 171 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 249 (365)
..|++...+..++|.|+|++.+..+ ...+..+.+.+..+. +.........+..|+.+.|...+.
T Consensus 145 ----q~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~-----------v~~~~~~~~~~~~~~~~~~~~~~~ 209 (304)
T 3shs_A 145 ----QDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMN-----------VDQDVVESKTVALGNEISLNYVVS 209 (304)
T ss_dssp ----SEEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEE-----------EEECCCSEEEEETTSCEEECCEEE
T ss_pred ----cccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccc-----------cchhheEeehhhcCcEEEEEEEEe
Confidence 3566777788999999999999866 455556666555211 111112223377888888876653
Q ss_pred e--------eCCCc-eeEEEeCCCCCCCC----------CCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCc
Q psy3823 250 A--------NPQAQ-YFTWAFNNSDTAPR----------PLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 306 (365)
Q Consensus 250 ~--------~p~~~-~~~W~~~~~~~~~~----------~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g 306 (365)
. +|.-. .+.|+........+ ...+.+..++ +|.-....-+|...|.|.+.--..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 282 (304)
T 3shs_A 210 EDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDG---HLFKESATYDDTAKFWCVAKLYQQ 282 (304)
T ss_dssp EECCSCCTTCCEEEEEEEEEEECTTCCSCEEEESSSEECGGGEEECTTS---CEEESSCCGGGCEEEEEEEEEEEE
T ss_pred eccccCCCCCCceEEEEEEEEeecCccCchhhhhhhhhhhccceeCCCc---ceeecccccccchheeeHHHHHHh
Confidence 2 22222 68898643221111 0112223334 255566778889999999975433
No 320
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.70 E-value=3.9e-17 Score=138.43 Aligned_cols=166 Identities=16% Similarity=0.169 Sum_probs=106.8
Q ss_pred EecCCcEEEEEEeCCC---CCcceEEEEeCCCcCCCCCCce--eEecCC---eEEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy3823 24 ALRNEQVLVSCTVDAN---PQAQYFTWAFNNSGTAPRPLTS--YSIQDG---STSVARYTPTSELEYGTLLCWARNEQGN 95 (365)
Q Consensus 24 v~~G~~~~l~C~~~~~---p~~~~v~W~~~~~~~l~~~~~~--~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~~ 95 (365)
+.+|+.++|.|.+.+. |.+..++|++++.. +...... ....++ ....|.|.+++.+|+|.|+|.+.+..+.
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 107 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVE-VHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFP 107 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCE-ECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCcc-ccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCC
Confidence 5689999999996554 65448999999866 4322110 011111 3357999999999999999999988775
Q ss_pred CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeCCeEEeeCCCCc-eEEe
Q psy3823 96 QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHNGITISNNASAG-RIIT 173 (365)
Q Consensus 96 ~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~~~~l~~~~~~~-~~~~ 173 (365)
......+... .....+|.+.+.+... ....|+.++|.|.+.| +|++..+.|++||..+....... ....
T Consensus 108 ~~~~~~v~~~-----~~~~~~P~v~v~~~~~----~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~ 178 (239)
T 1i1c_A 108 APIEKSISKP-----EGTPRGPQVYTMAPPK----EEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDT 178 (239)
T ss_dssp SCEEEEECCC-----SSCCBCCEEEEECCCG----GGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECT
T ss_pred CCcEEEEecC-----CCCCcCCEEEEECCCh----HHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECC
Confidence 4322222110 0014578777665331 2235889999999998 45545699999999875321111 1111
Q ss_pred e------ceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 174 N------QTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 174 ~------~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
+ ..|.+.....+|.|.|+|.+.|...
T Consensus 179 dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 179 DGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp TSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 2 2344555555679999999999764
No 321
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.70 E-value=1.4e-16 Score=132.71 Aligned_cols=174 Identities=14% Similarity=0.149 Sum_probs=119.8
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEe----eceEEEeeecCCCCeEEEEEEEcCCCCCCccc
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIIT----NQTLVLQSVTRHSGGLYACSAINSQGEGGSTP 205 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~ 205 (365)
..+.+|+.+.|.|.+.|.|.+. +.|+++|..+......+.... ...|.|.++...|+|.|+|.+.|..|... ..
T Consensus 28 ~~~~~G~~v~l~C~~~g~p~p~-i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~ 105 (215)
T 3mtr_A 28 VYTWEGNQVNITCEVFAYPSAT-ISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQES-LE 105 (215)
T ss_dssp EEECTTCCEEEEEEEEEESCCE-EEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEE-EE
T ss_pred EEEECCCCEEEEEEEeecCCCE-EEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceE-EE
Confidence 5678999999999999999886 999999998875433232222 57899999999999999999999998764 56
Q ss_pred EEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee----eCCCc-eeEEEeCCCCCCCCCCceeEeeCCC
Q psy3823 206 FDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA----NPQAQ-YFTWAFNNSDTAPRPLTSYSIQDGS 280 (365)
Q Consensus 206 ~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~----~p~~~-~~~W~~~~~~~~~~~~~~~~~~~~~ 280 (365)
+.|.+. ..|...... . . ...+..+.|.|.... .|... .+.|..++... .............
T Consensus 106 ~~l~v~----------~~P~~p~~~-~-~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~-w~~~~~~~~~~~~ 171 (215)
T 3mtr_A 106 FILVQA----------DTPSSPSID-Q-V-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEV-WHSKWYDAKEASM 171 (215)
T ss_dssp EEEEEC----------CCCCCCEEE-E-E-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCC-CEEEEEEHHHHHH
T ss_pred EEEEEC----------CCCCCCcce-E-E-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCc-ccccccccccccc
Confidence 777777 555432111 1 1 234677889987432 12221 47788766421 1000000011111
Q ss_pred EEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEEcC
Q psy3823 281 TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 281 ~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
...|.|.++...+.|.|+|.|.|..|....+..+.+..+
T Consensus 172 ~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~ 210 (215)
T 3mtr_A 172 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 210 (215)
T ss_dssp HTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECC
T ss_pred cccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEec
Confidence 135889999999999999999999998877777766544
No 322
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.70 E-value=9.8e-17 Score=135.05 Aligned_cols=172 Identities=14% Similarity=0.151 Sum_probs=109.2
Q ss_pred ceEEEEecCCcEEEEEEeCCCCC----cceEEEEeCCCc-CCC----------------CCCceeEe--cCCeEEEEEEc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQ----AQYFTWAFNNSG-TAP----------------RPLTSYSI--QDGSTSVARYT 75 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~----~~~v~W~~~~~~-~l~----------------~~~~~~~~--~~~~~~~l~i~ 75 (365)
+....+.+|++++|.|...+.|. + .+.|+|.... .+. ...+.... .......|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~-~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKV-GVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKIT 85 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCC-EEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEEC
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCce-eEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEc
Confidence 34467899999999999776664 6 8999986421 010 00111111 12234689999
Q ss_pred cCCCCCCeEEEEEEEeCCC------C--C-cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe
Q psy3823 76 PTSELEYGTLLCWARNEQG------N--Q-RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA 146 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~------~--~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 146 (365)
+++.+|+|.|.|.+.+..+ . . ...+.|.|... +..+|.+...... ..+.+|+.++|.|.+.+
T Consensus 86 ~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~-----~~~~P~i~~~~~~----~~~~~g~~~~l~C~~~g 156 (228)
T 3bae_H 86 SVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSA-----KTTAPSVYPLAPV----CGDTTGSSVTLGCLVKG 156 (228)
T ss_dssp SCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSC-----CCBCCEEEEECC---------CCSEEEEEEEEEE
T ss_pred CCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCC-----CCCCCEEEEeccc----ccccCCCCEEEEEEEcc
Confidence 9999999999999998654 1 1 13467887310 1235665543321 23568999999999998
Q ss_pred c-CCCCeeEEEeCCeEEeeCCCC-----ceEEeeceEEEeeecCCCCeEEEEEEEcCCCCC
Q psy3823 147 N-PPYKKLIWTHNGITISNNASA-----GRIITNQTLVLQSVTRHSGGLYACSAINSQGEG 201 (365)
Q Consensus 147 ~-p~~~~i~W~~~~~~l~~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 201 (365)
. |.+..+.|++++..+...... +.......|.|.....++ |.|+|.+.|..+..
T Consensus 157 ~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~ 216 (228)
T 3bae_H 157 YFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASST 216 (228)
T ss_dssp EBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred EeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCC
Confidence 6 666459999987643110000 111224568888887766 99999999987643
No 323
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.69 E-value=7.9e-16 Score=132.48 Aligned_cols=162 Identities=15% Similarity=0.174 Sum_probs=107.5
Q ss_pred cceecCCcEEEEEEEEecC------CCCeeEEEeC--CeE---EeeC-------CCCceEEe----eceEEEeeecCCCC
Q psy3823 130 SVLNEGVDIYFDCHIQANP------PYKKLIWTHN--GIT---ISNN-------ASAGRIIT----NQTLVLQSVTRHSG 187 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p------~~~~i~W~~~--~~~---l~~~-------~~~~~~~~----~~~l~i~~~~~~d~ 187 (365)
..+.+|++|+|.|.+.+.+ .+. +.|+++ +.. +... ...+.... ..+|.|.+++.+|+
T Consensus 15 v~v~~G~~v~L~C~~~~~~~~~~~~~~~-v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 93 (264)
T 2gjj_A 15 LPVSVGEKVTMTCKSSQTLLYSNNQKNY-LAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAEDL 93 (264)
T ss_dssp EEEETTCCEEEEEEESSCCEETTTTEEC-EEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEecCCCcEEEEeEcCCcccccccCCce-EEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHHC
Confidence 4688999999999998766 344 999984 321 1110 01122221 34899999999999
Q ss_pred eEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCC------------------cee-cCccceeeeecCceEEEEEEE
Q psy3823 188 GLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEP------------------VCK-QSQQRIYGALRNEQVLVSCTV 248 (365)
Q Consensus 188 G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p------------------~~~-~~~~~~~~~~~g~~~~l~C~~ 248 (365)
|.|.|.+.+..+........|.|. .+| .+. ...... .+.+|+.++|.|.+
T Consensus 94 G~Y~C~~~~~~~~~~~~~~~L~V~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~G~~v~L~C~~ 162 (264)
T 2gjj_A 94 AVYYCQQYSNYPWTFGGGTRLEIK----------RGGGGSGGGGSGGGGSGGGGSEVQLQQSGPE-VVKTGASVKISCKA 162 (264)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEE----------CC-------------------CCEEEECCCE-EECTTCCEEEEEEE
T ss_pred EEEEEEEecCCccEecCCEEEEEE----------cCCcccccccccccccccccCcEEEeCCCCE-EEcCCCcEEEEEEE
Confidence 999999998754323344577777 332 221 112222 38899999999999
Q ss_pred eeeCC--CceeEEEeCCCCCCCC------------------CCceeEe--eCCCEEEEEEcCCCcccCeEEEEEEEcC
Q psy3823 249 DANPQ--AQYFTWAFNNSDTAPR------------------PLTSYSI--QDGSTSVARYTPTSELEYGTLLCWARNE 304 (365)
Q Consensus 249 ~~~p~--~~~~~W~~~~~~~~~~------------------~~~~~~~--~~~~~s~l~i~~v~~~d~G~Y~C~a~n~ 304 (365)
.+.+. +. +.|++++...... ..+..+. .......|.|.+++.+|+|.|.|.|.|.
T Consensus 163 ~~~~~~~~~-v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 163 SGYSFTGYF-INWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp ESSCGGGSE-EEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred eCCccCCeE-EEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 88764 55 9999874211110 1112221 2334668999999999999999999995
No 324
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.69 E-value=6.2e-16 Score=129.35 Aligned_cols=170 Identities=16% Similarity=0.262 Sum_probs=110.1
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeE---Ee-eC-----------CCCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GIT---IS-NN-----------ASAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~---l~-~~-----------~~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++|+|.|.+.+.+ .+. +.|++. +.. +. .. ...+.... +.+|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (220)
T 2fbj_H 10 GLVQPGGSLKLSCAASGFDFSKYW-MSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRS 88 (220)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSC-EEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCG
T ss_pred eEecCCCcEEEEEEecCccCCCce-EEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCCh
Confidence 3678999999999998765 344 999983 221 11 00 01122222 34899999999
Q ss_pred CCCeEEEEEEEcCCCC--CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CC--CceeEE
Q psy3823 185 HSGGLYACSAINSQGE--GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQ--AQYFTW 259 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~--~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~--~~~~~W 259 (365)
.|+|.|.|.+.+..+. .....+.|.|... ...+|.+.... . ..+..|+.++|.|.+.+. |. +. +.|
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~------~~~~P~v~~~~-~-~~~~~g~~v~L~C~~~g~~P~~~~~-v~W 159 (220)
T 2fbj_H 89 EDTALYYCARLHYYGYNAYWGQGTLVTVSAE------SARNPTIYPLT-L-PPALSSDPVIIGCLIHDYFPSGTMN-VTW 159 (220)
T ss_dssp GGCEEEEEEEEETTTEEEEECCCEEEEECSS------CCBCCEEEEEC-C-CSSSCCSSEEEEEEEEEEBSCCCEE-EEE
T ss_pred hhCEEEEEEEeccccccceecCCEEEEecCC------CCCCCEEEEee-c-ccccCCCcEEEEEEEEeEECCCcEE-EEE
Confidence 9999999999987542 1223456777610 00234443322 1 125689999999999887 65 45 999
Q ss_pred EeCCCCCCCCCCceeEeeCCCE---EEEEEcCCCcccCeEEEEEEEcCCccce
Q psy3823 260 AFNNSDTAPRPLTSYSIQDGST---SVARYTPTSELEYGTLLCWARNEQGSQR 309 (365)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~---s~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 309 (365)
++++..............++.. +.|.|.....+|.|.|+|.|.|..|...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 160 GKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp SCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred ecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 9987643110011111233332 3589998888999999999999998865
No 325
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.69 E-value=1.1e-15 Score=128.91 Aligned_cols=173 Identities=13% Similarity=0.172 Sum_probs=107.5
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCc-CCC----------------CCCceeEe--cCCeEEEEEEccC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSG-TAP----------------RPLTSYSI--QDGSTSVARYTPT 77 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~-~l~----------------~~~~~~~~--~~~~~~~l~i~~~ 77 (365)
+....+.+|++++|.|...+.+ .. .+.|||.... ... ...+.... .......|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDY-YWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSV 85 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSC-CEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCc-eEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCC
Confidence 3446789999999999965554 45 8999986421 010 01111111 1234558999999
Q ss_pred CCCCCeEEEEEEEeCCC--C----CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecC-CcEEEEEEEEec-CC
Q psy3823 78 SELEYGTLLCWARNEQG--N----QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEG-VDIYFDCHIQAN-PP 149 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~--~----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g-~~v~l~C~~~~~-p~ 149 (365)
+.+|+|.|.|.+.+..+ . ......|.|... +..+|.+...... ..+.+| +.++|.|.+.+. |.
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~-----~~~~P~v~~~~p~----~~~~~g~~~v~L~C~~~g~~P~ 156 (232)
T 1dn0_B 86 TAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSG-----SASAPTLFPLVSC----ENSPSDTSSVAVGCLAQDFLPD 156 (232)
T ss_dssp CGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSS-----CCBCCEEEEEECC----------CCSEEEEEEEEEEBSS
T ss_pred CcccCEEEEEEEecCCcCCchhhhcccceEEEEccC-----CCCCCceEEeccc----cccCCCCCcEEEEEEEEEEeCC
Confidence 99999999999984221 1 114467888310 1234655433211 134578 999999999985 66
Q ss_pred CCeeEEEe-CCeEEeeCC---C---CceEEeeceEEEeeecC--CCCeEEEEEEEcCCCCC
Q psy3823 150 YKKLIWTH-NGITISNNA---S---AGRIITNQTLVLQSVTR--HSGGLYACSAINSQGEG 201 (365)
Q Consensus 150 ~~~i~W~~-~~~~l~~~~---~---~~~~~~~~~l~i~~~~~--~d~G~Y~C~~~~~~~~~ 201 (365)
+..+.|++ ||..+.... . .+.....+.|.|..... +|.|.|+|.+.|..+..
T Consensus 157 p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~ 217 (232)
T 1dn0_B 157 SITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNK 217 (232)
T ss_dssp CCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCE
T ss_pred CeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCc
Confidence 64699999 998874300 0 01122245688887776 78999999999988753
No 326
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.69 E-value=3.3e-16 Score=136.83 Aligned_cols=188 Identities=13% Similarity=0.124 Sum_probs=112.2
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-CC-----------------CCCceeEe--cCCeEEEEEEcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-AP-----------------RPLTSYSI--QDGSTSVARYTP 76 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l~-----------------~~~~~~~~--~~~~~~~l~i~~ 76 (365)
+....+.+|++++|.|...+.| .+ .+.|+|..... +. ...+.... .......|.|.+
T Consensus 29 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 29 SGPELVKPGASVKMSCKASGYTFTSY-VMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred CCcEEecCCCCEEEEEeccCCccccc-EEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 3467789999999999976666 46 89999964210 10 00111111 122346899999
Q ss_pred CCCCCCeEEEEEEEeCC-CCC----cccEEEEEEec-----cccCC-CC-CCCeEEEEcCCccCccceecCCcEEEEEEE
Q psy3823 77 TSELEYGTLLCWARNEQ-GNQ----RTPCTFHVVKA-----GECEH-PV-DKPSVQIKLGRNLNASVLNEGVDIYFDCHI 144 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~-~~~----~~~~~l~V~~~-----~~~~~-~~-~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~ 144 (365)
++.+|+|.|.|.+.+.. +.. .....|.|..+ +.... +. .++.+...+ ....+.+|++++|.|.+
T Consensus 108 v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p----~~~~v~~G~~v~L~C~~ 183 (291)
T 2gki_A 108 LTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSP----SSLAVSAGEKVTMSCKS 183 (291)
T ss_dssp CCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSC----SEEEEETTSCEEEEEEE
T ss_pred CCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCC----CEEEEcCCCcEEEEEEc
Confidence 99999999999999864 211 13457777320 00000 00 022222111 23467899999999999
Q ss_pred EecCCC-----CeeEEEeC--CeE---EeeCC-------CCceEE--e--eceEEEeeecCCCCeEEEEEEEcCCCCCCc
Q psy3823 145 QANPPY-----KKLIWTHN--GIT---ISNNA-------SAGRII--T--NQTLVLQSVTRHSGGLYACSAINSQGEGGS 203 (365)
Q Consensus 145 ~~~p~~-----~~i~W~~~--~~~---l~~~~-------~~~~~~--~--~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s 203 (365)
.+.+.+ ..+.|+++ +.. +.... ..+... . ..+|.|.+++.+|+|.|+|.+.+.......
T Consensus 184 ~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg 263 (291)
T 2gki_A 184 SQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFG 263 (291)
T ss_dssp SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEc
Confidence 887655 14999985 221 11100 112211 1 347999999999999999999985432222
Q ss_pred ccEEEEEe
Q psy3823 204 TPFDLNIN 211 (365)
Q Consensus 204 ~~~~l~v~ 211 (365)
.-..|.|.
T Consensus 264 ~gt~l~v~ 271 (291)
T 2gki_A 264 SGTKLEIK 271 (291)
T ss_dssp CCEEEEEE
T ss_pred CCEEEEEE
Confidence 23445555
No 327
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.69 E-value=4.6e-16 Score=130.65 Aligned_cols=170 Identities=12% Similarity=0.204 Sum_probs=107.9
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeEEe----e-----------CCCCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GITIS----N-----------NASAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~l~----~-----------~~~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++++|.|.+.+.+ .+. +.|+++ +..+. . ....+.... +.+|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (225)
T 1op3_H 10 GLVKAGGSLILSCGVSNFRISAHT-MNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRV 88 (225)
T ss_dssp EEEETTCCEEEEEEEESSCGGGSC-EEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred eEecCCCCEEEEEEecCcccCCce-EEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 3578999999999998765 455 999984 22111 0 011122222 35899999999
Q ss_pred CCCeEEEEEEEcCCC-----C--CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCce
Q psy3823 185 HSGGLYACSAINSQG-----E--GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQY 256 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~-----~--~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~ 256 (365)
.|+|.|.|.+.+..+ . .....+.|.|... ...+|.+........ +..|+.++|.|.+.+. |.+..
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~------~~~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~ 161 (225)
T 1op3_H 89 EDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPA------STKGPSVFPLAPSSK-STSGGTAALGCLVKDYFPEPVT 161 (225)
T ss_dssp GGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESC------SCBCCEEEEECCCTT-CCCCCEEEEEEEEEEEBSSCCE
T ss_pred hhCEEEEEEEecCCCccccccceeecCCEEEecccC------CCcCCeEEEeccccc-ccCCCcEEEEEEEEeEECCCeE
Confidence 999999999998764 1 1123457777610 002344432211111 5679999999999986 66623
Q ss_pred eEEEeCCCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 257 FTWAFNNSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 257 ~~W~~~~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
+.|++++..............++. .+.|.|..+..+| |.|+|.|.|..+..
T Consensus 162 v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 215 (225)
T 1op3_H 162 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 215 (225)
T ss_dssp EECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTE
T ss_pred EEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCc
Confidence 999998764211100111122332 3468999988888 99999999976654
No 328
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.69 E-value=1.1e-15 Score=129.35 Aligned_cols=173 Identities=16% Similarity=0.187 Sum_probs=108.7
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-CC---------------CCCceeEe-cCCeEEEEEEccCCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-AP---------------RPLTSYSI-QDGSTSVARYTPTSELE 81 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l~---------------~~~~~~~~-~~~~~~~l~i~~~~~~d 81 (365)
+..+.+.+|+.++|.|... .+.+ .+.|+|++... .. ...+.... .......|.|.+++.+|
T Consensus 6 p~~v~v~~G~~v~L~C~~~-~~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D 83 (238)
T 1bec_A 6 PRNKVAVTGGKVTLSCQQT-NNHN-NMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQ 83 (238)
T ss_dssp CSEEEEETTCCEEEEEEES-SCCS-EEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGG
T ss_pred CCeeEEeCCCcEEEEEEeC-CCCc-eEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCccc
Confidence 4567789999999999974 4566 99999975210 10 01111111 12345689999999999
Q ss_pred CeEEEEEEEeCCC---CC--cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEE
Q psy3823 82 YGTLLCWARNEQG---NQ--RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIW 155 (365)
Q Consensus 82 ~G~Y~C~a~~~~~---~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W 155 (365)
+|.|.|.+.+..+ .. .....|.|..... ...+|.+.+.... ...+.+|+.++|.|.+.+. |.+..+.|
T Consensus 84 ~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~---~~~~P~v~~~~~~---~~~~~~g~~~~L~C~~~g~~P~~~~v~W 157 (238)
T 1bec_A 84 TSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLR---QVTPPKVSLFEPS---KAEIANKQKATLVCLARGFFPDHVELSW 157 (238)
T ss_dssp CEEEEEEEESCTTCGGGCEECCCEEEEEESCGG---GCBCCEEEEECCC---STTCSSSCSCSEEEEEEEEBSCCEEEEE
T ss_pred CEEEEEEEecCCCCccccccCCCEEEEEeccCC---CCCCCceEEECCC---hHHcccCCceEEEEEEeeEeCCCcEEEE
Confidence 9999999998642 11 1345677732100 0136766655332 2346689999999999986 55545999
Q ss_pred EeCCeEEeeCCC---CceEEeece------EEEeeecCC-CCeEEEEEEEcCCC
Q psy3823 156 THNGITISNNAS---AGRIITNQT------LVLQSVTRH-SGGLYACSAINSQG 199 (365)
Q Consensus 156 ~~~~~~l~~~~~---~~~~~~~~~------l~i~~~~~~-d~G~Y~C~~~~~~~ 199 (365)
++||..+..... ......+++ |.|...... +.|.|+|.+.|...
T Consensus 158 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 158 WVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp EETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred EECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 999998854211 011122233 334433333 46889999999753
No 329
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.69 E-value=5.5e-16 Score=132.76 Aligned_cols=171 Identities=9% Similarity=0.064 Sum_probs=105.2
Q ss_pred ceecCCcEEEEEEEEec--CCCCeeEEEeC--CeE---EeeC-------CCCceEEe----eceEEEeeecCCCCeEEEE
Q psy3823 131 VLNEGVDIYFDCHIQAN--PPYKKLIWTHN--GIT---ISNN-------ASAGRIIT----NQTLVLQSVTRHSGGLYAC 192 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~--p~~~~i~W~~~--~~~---l~~~-------~~~~~~~~----~~~l~i~~~~~~d~G~Y~C 192 (365)
.+.+|++|+|.|.+.+. +.+. +.|+++ +.. +... ...+.... ..+|.|.+++.+|+|.|.|
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 91 (256)
T 3ux9_B 13 SGAPGQRVTISCSGSSSNIGSNY-VSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYYC 91 (256)
T ss_dssp EECTTCCEEEEEECCTTTTTTSC-CEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EEcCCCcEEEEEecCCCCCCCce-EEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEEE
Confidence 57899999999999875 5555 999983 211 1100 01112211 3379999999999999999
Q ss_pred EEEcCCCC--CCcccEEEEEeeeeeccc-----------ccCCCCceecCccceeeeecCceEEEEEEEeeeC--CCcee
Q psy3823 193 SAINSQGE--GGSTPFDLNINKMVNLIF-----------NSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANP--QAQYF 257 (365)
Q Consensus 193 ~~~~~~~~--~~s~~~~l~v~~~~~~~~-----------~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~~~~~ 257 (365)
.+.+..+. .......|.|..+..... .....+.+... ... .+.+|+.++|.|.+.+.+ .+. +
T Consensus 92 ~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~v~~G~~v~L~C~~~~~~~~~~~-v 168 (256)
T 3ux9_B 92 QVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVES-GGG-LVQPGGSLRLSCAASGFTFSSYA-M 168 (256)
T ss_dssp EEEETTTTEEEECCCEEEEEC----------------------CCEEEEE-CCE-EECTTCCEEEEEEEESSCGGGSE-E
T ss_pred EEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcC-CCe-EEcCCCeEEEEEEEeCCcccccE-E
Confidence 99986542 222345677762100000 00001122222 222 278999999999998866 565 9
Q ss_pred EEEeCCCCCCCC------------------CCceeEee--CCCEEEEEEcCCCcccCeEEEEEEEcCC
Q psy3823 258 TWAFNNSDTAPR------------------PLTSYSIQ--DGSTSVARYTPTSELEYGTLLCWARNEQ 305 (365)
Q Consensus 258 ~W~~~~~~~~~~------------------~~~~~~~~--~~~~s~l~i~~v~~~d~G~Y~C~a~n~~ 305 (365)
.|++++...... ..+..... ......|.|.+++.+|+|.|+|.|.|..
T Consensus 169 ~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 169 SWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 999864221110 01222221 2446679999999999999999999963
No 330
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.69 E-value=2.4e-16 Score=131.26 Aligned_cols=172 Identities=19% Similarity=0.203 Sum_probs=119.8
Q ss_pred cccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCC--ceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 8 STDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPL--TSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 8 ~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
..++|.+. .+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +.... ............|.|.+++.+|.|.|
T Consensus 16 ~~~~P~~~--~p~~~~~~~G~~v~l~C~~~g~p~p-~i~W~~~g~~-l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 91 (215)
T 3mtr_A 16 HMYAPKLQ--GPVAVYTWEGNQVNITCEVFAYPSA-TISWFRDGQL-LPSSNYSNIKIYNTPSASYLEVTPDSENDFGNY 91 (215)
T ss_dssp CCEEEEEE--CCSEEEECTTCCEEEEEEEEEESCC-EEEEEETTEE-SSCSSSCSEEEEEETTEEEEEECCCSGGGCEEE
T ss_pred eecCCccc--CCceEEEECCCCEEEEEEEeecCCC-EEEEEECCeE-CCCCCCccEEEecCCCeeEEEEecCChhhCeEE
Confidence 34567663 3444778999999999998899999 9999999988 66543 22233334456899999999999999
Q ss_pred EEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe---c-CCC-CeeEEEeCCe
Q psy3823 86 LCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA---N-PPY-KKLIWTHNGI 160 (365)
Q Consensus 86 ~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~---~-p~~-~~i~W~~~~~ 160 (365)
+|.|.|..|.....+.|.| ..+|...... .....+..+.|.|.... . |.. ..+.|.+++.
T Consensus 92 ~C~a~n~~g~~~~~~~l~v---------~~~P~~p~~~------~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~ 156 (215)
T 3mtr_A 92 NCTAVNRIGQESLEFILVQ---------ADTPSSPSID------QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGE 156 (215)
T ss_dssp EEEEECSSCEEEEEEEEEE---------CCCCCCCEEE------EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTC
T ss_pred EEEEEECCCceEEEEEEEE---------CCCCCCCcce------EEEEecceEEEEEecCCccCCCceEEEEEEEEECCC
Confidence 9999999998888888888 3333211100 01234577899987442 1 211 1266777664
Q ss_pred EEeeCCCCceEE------eeceEEEeeecCCCCeEEEEEEEcCCCCCC
Q psy3823 161 TISNNASAGRII------TNQTLVLQSVTRHSGGLYACSAINSQGEGG 202 (365)
Q Consensus 161 ~l~~~~~~~~~~------~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 202 (365)
.... .... ....+.|.++...+.|.|+|.|.|..|...
T Consensus 157 ~~w~----~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~ 200 (215)
T 3mtr_A 157 EVWH----SKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGE 200 (215)
T ss_dssp CCCE----EEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCC
T ss_pred Cccc----ccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccC
Confidence 3211 0111 126899999999999999999999998654
No 331
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.68 E-value=1.1e-15 Score=133.61 Aligned_cols=173 Identities=14% Similarity=0.210 Sum_probs=107.3
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeCC--eE---Eee--------------CCCCceEEe----eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHNG--IT---ISN--------------NASAGRIIT----NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~~--~~---l~~--------------~~~~~~~~~----~~~l~i~~~~~ 184 (365)
..+.+|++++|.|.+.+.+ .+. +.|+++. .. +.. ..+...... ..+|.|.+++.
T Consensus 32 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 110 (291)
T 2gki_A 32 ELVKPGASVKMSCKASGYTFTSYV-MHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTS 110 (291)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSC-EEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCG
T ss_pred EEecCCCCEEEEEeccCCcccccE-EEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCH
Confidence 4678999999999998765 344 9999842 11 110 011111211 35799999999
Q ss_pred CCCeEEEEEEEcCC-CCC---CcccEEEEEeeee-----eccc-ccCCCCceecCccceeeeecCceEEEEEEEeeeCCC
Q psy3823 185 HSGGLYACSAINSQ-GEG---GSTPFDLNINKMV-----NLIF-NSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA 254 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~-~~~---~s~~~~l~v~~~~-----~~~~-~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~ 254 (365)
+|+|.|.|.+.+.. +.. ......|.|..+. .... .....+.+...+. ...+.+|+.++|.|.+.+.|.+
T Consensus 111 ~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~-~~~v~~G~~v~L~C~~~~~~~~ 189 (291)
T 2gki_A 111 EDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPS-SLAVSAGEKVTMSCKSSQSLFN 189 (291)
T ss_dssp GGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCS-EEEEETTSCEEEEEEESSCCEE
T ss_pred HHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCC-EEEEcCCCcEEEEEEcCCcccc
Confidence 99999999999874 211 1123467776100 0000 0000222332222 2348899999999999887765
Q ss_pred ------ceeEEEeCCCCCCCC-------------CCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCC
Q psy3823 255 ------QYFTWAFNNSDTAPR-------------PLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQ 305 (365)
Q Consensus 255 ------~~~~W~~~~~~~~~~-------------~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~ 305 (365)
. +.|++++...... ..++....++....|.|.+++.+|+|.|.|.|.|..
T Consensus 190 ~~~~~~~-v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 190 SRTRKNY-LAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp TTTTEEC-EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred cccccee-EEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 6 9999964211110 112222234456689999999999999999999854
No 332
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.68 E-value=1.1e-15 Score=131.17 Aligned_cols=174 Identities=9% Similarity=0.109 Sum_probs=101.2
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-CC-----C--C-----------Ccee-EecCCeEEEEEEccCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-AP-----R--P-----------LTSY-SIQDGSTSVARYTPTS 78 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l~-----~--~-----------~~~~-~~~~~~~~~l~i~~~~ 78 (365)
+..+.+.+|++++|.|...+.|.+ .+.|+|..... .. . . .... .........|.|.+++
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 87 (259)
T 3omz_A 9 TKSVIRQTGSSAEITCDLAEGSTG-YIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLI 87 (259)
T ss_dssp --CEEEETTCCEEEECCC-----C-EEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCC
T ss_pred CceeEecCCCcEEEEEEEccCCCc-EEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCC
Confidence 456778999999999998778888 99999942110 10 0 0 0000 0112233479999999
Q ss_pred CCCCeEEEEEEEeCCCC---CcccEEEEEEeccccCC--------CCCCCeEEEEcCCccCccceecCCcEEEEEEEEec
Q psy3823 79 ELEYGTLLCWARNEQGN---QRTPCTFHVVKAGECEH--------PVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN 147 (365)
Q Consensus 79 ~~d~G~Y~C~a~~~~~~---~~~~~~l~V~~~~~~~~--------~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~ 147 (365)
.+|+|.|.|.+.+..+. ......|.|........ ....|.+...+ ....+.+|++++|.|.+.+.
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p----~~~~v~~G~~v~L~C~~~~~ 163 (259)
T 3omz_A 88 ENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQ----SSVSMPVRKAVTLNCLYETS 163 (259)
T ss_dssp GGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCC----CCEEEETTCCEEECCEEECC
T ss_pred cccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeC----CEEEEcCCCCEEEEEECCCc
Confidence 99999999999987652 22556777742110000 00022322222 33568899999999988875
Q ss_pred CCCCeeEEEeCC--eEEee----CC------CCceEEe------eceEEEeeecCCCCeEEEEEEEcC
Q psy3823 148 PPYKKLIWTHNG--ITISN----NA------SAGRIIT------NQTLVLQSVTRHSGGLYACSAINS 197 (365)
Q Consensus 148 p~~~~i~W~~~~--~~l~~----~~------~~~~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~ 197 (365)
.+...+.|+++. ..+.. .. ..+.... ...|.|.+++.+|+|.|.|.+.+.
T Consensus 164 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 164 WWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp CSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred cCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 334449999832 21110 00 0111111 346999999999999999999853
No 333
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.67 E-value=4e-16 Score=129.22 Aligned_cols=164 Identities=15% Similarity=0.187 Sum_probs=100.0
Q ss_pred ecCCcEEEEEEeCCCC----CcceEEEEeCCCcCCCCCCc--eeEecCCeE---EEEEEccCCCCCCeEEEEEEEeCCCC
Q psy3823 25 LRNEQVLVSCTVDANP----QAQYFTWAFNNSGTAPRPLT--SYSIQDGST---SVARYTPTSELEYGTLLCWARNEQGN 95 (365)
Q Consensus 25 ~~G~~~~l~C~~~~~p----~~~~v~W~~~~~~~l~~~~~--~~~~~~~~~---~~l~i~~~~~~d~G~Y~C~a~~~~~~ 95 (365)
.+|++++|.|.+.+.+ .. .++|+|++.. +..... .....++.. +.|.|.....+|+|.|+|.|.+..+.
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~-~v~W~k~~~~-~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~ 93 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEV-KFNWYVDGVE-VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALP 93 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCC-EEEEEETTEE-ECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSS
T ss_pred ecCCceEEEEEEecccCCCCCe-EEEEEECCcc-ccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCC
Confidence 6899999999965654 34 9999999976 543211 011122321 23444444455699999999987765
Q ss_pred CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEEeCCeEEeeCCCCce-EEe
Q psy3823 96 QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWTHNGITISNNASAGR-IIT 173 (365)
Q Consensus 96 ~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~~~~l~~~~~~~~-~~~ 173 (365)
......+... . ....+|.+.+.+... ....|+.++|.|.+.|. |++..+.|++||..+........ ...
T Consensus 94 ~~~~~~v~~~-~----~~~~~P~v~~~~~~~----~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~ 164 (207)
T 1l6x_A 94 APIEKTISKA-K----GQPREPQVYTLPPSR----DELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS 164 (207)
T ss_dssp SCEEEEECCC-C----SCCBCCEEEEECCCG----GGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECT
T ss_pred cceEEEeccC-C----CCCcCCEEEEECCCh----HHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECC
Confidence 4322223110 0 014577776654331 12356669999999985 54446999999998753211111 111
Q ss_pred e------ceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 174 N------QTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 174 ~------~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
+ ..|.+.....+|.|.|+|.|.|...
T Consensus 165 ~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 165 DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp TSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 2 3345555555789999999999764
No 334
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.67 E-value=8e-16 Score=131.56 Aligned_cols=172 Identities=15% Similarity=0.185 Sum_probs=110.3
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCC--------CCC----------ceeEecCCeEEEEEEccCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAP--------RPL----------TSYSIQDGSTSVARYTPTSEL 80 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~--------~~~----------~~~~~~~~~~~~l~i~~~~~~ 80 (365)
+..+.+.+|+.++|.|...+.+.+ .+.|||.... .. ... +.....+.... |.|.+++.+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~-~v~W~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~ 84 (253)
T 3to4_D 8 PRWRLVPRGQAVNLRCILKNSQYP-WMSWYQQDLQ-KQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMS 84 (253)
T ss_dssp CSEEEEESSCCEEEEEECSCTTCC-CEEEEEEETT-CCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCS
T ss_pred CCeEEEeCCCcEEEEEEeCCCCcc-eEEEEEECCC-CCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChh
Confidence 346778999999999997677777 9999984221 00 000 11111111111 999999999
Q ss_pred CCeEEEEEEEeCCCC---C---cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCee
Q psy3823 81 EYGTLLCWARNEQGN---Q---RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKL 153 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~---~---~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i 153 (365)
|+|.|.|.+.+..+. . .....|.|..... ...+|.+.+.... ...+.+|+.++|.|.+.+ .|++..+
T Consensus 85 DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~---~~~~P~v~~~~~~---~~~~~~g~~~~L~C~~~g~~P~~i~v 158 (253)
T 3to4_D 85 QGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLK---NVFPPEVAVFEPS---EAEISHTQKATLVCLATGFYPDHVEL 158 (253)
T ss_dssp SCEEEEEEEECSCCSTTCCEEECCCEEEEEESCST---TCBCCEEEEEECC---HHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred hCeEEEEEEecCCCCcccceEECCCEEEEEecCCC---CCCCCeEEEeCCC---hhhcccCCceEEEEEEceEECCcEEE
Confidence 999999999876441 1 1445677632100 1246766654322 123446789999999998 5555359
Q ss_pred EEEeCCeEEeeCC-------------CCceEEeeceEEEeeecCCC-CeEEEEEEEcCCC
Q psy3823 154 IWTHNGITISNNA-------------SAGRIITNQTLVLQSVTRHS-GGLYACSAINSQG 199 (365)
Q Consensus 154 ~W~~~~~~l~~~~-------------~~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~ 199 (365)
.|++||..+.... ..+.......|.|.....+| .|.|+|.+.|...
T Consensus 159 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l 218 (253)
T 3to4_D 159 SWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (253)
T ss_dssp EEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred EEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCC
Confidence 9999999885311 11122223467777777777 7899999998754
No 335
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.67 E-value=2.1e-15 Score=130.95 Aligned_cols=184 Identities=13% Similarity=0.145 Sum_probs=110.3
Q ss_pred cceecCCcEEEEEEEEec--CCCCeeEEEeCC--eEE----eeC-C----------CCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQAN--PPYKKLIWTHNG--ITI----SNN-A----------SAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~--p~~~~i~W~~~~--~~l----~~~-~----------~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++|+|.|.+.+. +.+. +.|++.. ..+ ... . ..+.... ..+|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (280)
T 3fku_X 10 EVKKPGSSVKVSCTSSEVTFSSFA-ISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRS 88 (280)
T ss_dssp CEECTTCCEEEEEEECCSCCTTSC-EEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCS
T ss_pred EEECCCCcEEEEEEeeccCCCCeE-EEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCCh
Confidence 467899999999999874 3344 9999732 111 000 0 0111111 13799999999
Q ss_pred CCCeEEEEEEEcC--------CCCCCcccEEEEEee-eee----cccccCCCCceecCccceeeeecCceEEEEEEEee-
Q psy3823 185 HSGGLYACSAINS--------QGEGGSTPFDLNINK-MVN----LIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA- 250 (365)
Q Consensus 185 ~d~G~Y~C~~~~~--------~~~~~s~~~~l~v~~-~~~----~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~- 250 (365)
.|+|.|.|.+.+. ..........|.|.. +.. .......++.+...+. ..+.+|+.++|.|.+.+
T Consensus 89 ~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~--~~v~~G~~v~L~C~~~~~ 166 (280)
T 3fku_X 89 EDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS--VSKGLRQTATLTCTGNSN 166 (280)
T ss_dssp TTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE--EEECTTCCEEEEEECCCC
T ss_pred hhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc--EEEecCCCEEEEEEecCC
Confidence 9999999999986 111122344566651 000 0000001333333333 44889999999999987
Q ss_pred eC-CCceeEEEeCCCCCCCC-------------CCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCcc---ceecEE
Q psy3823 251 NP-QAQYFTWAFNNSDTAPR-------------PLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGS---QRTPCT 313 (365)
Q Consensus 251 ~p-~~~~~~W~~~~~~~~~~-------------~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~---~~~~~~ 313 (365)
.+ .+. +.|++........ ..++....++....|.|.+++.+|+|.|.|.+.|..+. ......
T Consensus 167 ~~~~~~-v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~~t~ 245 (280)
T 3fku_X 167 NVGNQG-AAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGGGTK 245 (280)
T ss_dssp CCCTTC-CEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBCCCE
T ss_pred CCCCce-EEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECCCEE
Confidence 44 355 9998743211110 12233334455677999999999999999999997632 223345
Q ss_pred EEEE
Q psy3823 314 FHVV 317 (365)
Q Consensus 314 l~v~ 317 (365)
|.|.
T Consensus 246 l~V~ 249 (280)
T 3fku_X 246 LTVL 249 (280)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5554
No 336
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.67 E-value=1.2e-15 Score=131.07 Aligned_cols=170 Identities=14% Similarity=0.144 Sum_probs=109.5
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCc-CCC--------C---------CCceeEec--CCeEEEEEEcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSG-TAP--------R---------PLTSYSIQ--DGSTSVARYTP 76 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~-~l~--------~---------~~~~~~~~--~~~~~~l~i~~ 76 (365)
+....+.+|++++|.|...+.| .+ .+.|+|+... .+. . ..+..... ......|.|.+
T Consensus 13 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 91 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKASGYSFTSY-WMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSS 91 (261)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCc-eEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcC
Confidence 4566789999999999976666 45 9999997421 010 0 01111111 12345899999
Q ss_pred CCCCCCeEEEEEEEeCCCCC---cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCe
Q psy3823 77 TSELEYGTLLCWARNEQGNQ---RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKK 152 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~~~~---~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~ 152 (365)
++.+|+|.|.|.+.+..+.. ...+.|.|... +..+|.+.+.... ..+.+|+.++|.|.+.+. |.+..
T Consensus 92 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~-----~~~~P~v~~~~p~----~~v~~g~~v~L~C~~~g~~P~~i~ 162 (261)
T 2xqy_G 92 LTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSA-----KTTAPSVYPLAPV----CGDTTGSSVTLGCLVKGYFPEPVT 162 (261)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSS-----CCBCCEEEEECCC----CC--CCSEEEEEEEEEEEBSSCCE
T ss_pred CCcccCeEEEEEEecCCCcceEECCCEEEEEccC-----CCCCCeEEEeCCC----ccccCCCcEEEEEEEEeEeCCCCE
Confidence 99999999999999854211 14467887310 1235665543322 235689999999999975 66646
Q ss_pred eEEEeCCeEEeeCCCC-----ceEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 153 LIWTHNGITISNNASA-----GRIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 153 i~W~~~~~~l~~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
+.|++++..+...... ........|.|.....+| |.|+|.+.|...
T Consensus 163 v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~ 213 (261)
T 2xqy_G 163 LTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPAS 213 (261)
T ss_dssp EEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGG
T ss_pred EEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCC
Confidence 9999988754211111 112224578888888778 999999998654
No 337
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.66 E-value=7.8e-16 Score=133.69 Aligned_cols=174 Identities=13% Similarity=0.080 Sum_probs=105.2
Q ss_pred ceEEEEecCCcEEEEEEeCCC--CCcceEEEEeCCCcC-CC-------CC----------CceeEe--cCCeEEEEEEcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDAN--PQAQYFTWAFNNSGT-AP-------RP----------LTSYSI--QDGSTSVARYTP 76 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~--p~~~~v~W~~~~~~~-l~-------~~----------~~~~~~--~~~~~~~l~i~~ 76 (365)
+....+.+|++++|.|...+. +.+ .+.|+|..... .. .. .+.... .......|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSF-AISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRS 85 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTS-CEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECS
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCe-EEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 456778999999999996554 456 99999854210 10 00 011111 234456899999
Q ss_pred CCCCCCeEEEEEEEeCC-------CC--CcccEEEEEEe-ccc---cC--CCCCCCeEEEEcCCccCccceecCCcEEEE
Q psy3823 77 TSELEYGTLLCWARNEQ-------GN--QRTPCTFHVVK-AGE---CE--HPVDKPSVQIKLGRNLNASVLNEGVDIYFD 141 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~-------~~--~~~~~~l~V~~-~~~---~~--~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~ 141 (365)
++.+|+|.|.|.+.+.. .. ......|.|.. ... .. ....+|.+... +...+.+|++|+|.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~-----p~~~v~~G~~v~L~ 160 (280)
T 3fku_X 86 LRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQP-----PSVSKGLRQTATLT 160 (280)
T ss_dssp CCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCC-----SEEEECTTCCEEEE
T ss_pred CChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeC-----CcEEEecCCCEEEE
Confidence 99999999999998761 11 11456677732 000 00 00012222211 11467899999999
Q ss_pred EEEEe-cCCCCeeEEEe--CCeEEee---C-------CCCceEEe----eceEEEeeecCCCCeEEEEEEEcCC
Q psy3823 142 CHIQA-NPPYKKLIWTH--NGITISN---N-------ASAGRIIT----NQTLVLQSVTRHSGGLYACSAINSQ 198 (365)
Q Consensus 142 C~~~~-~p~~~~i~W~~--~~~~l~~---~-------~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~ 198 (365)
|.+.+ .+....+.|++ .+..+.. . ...+.... ..+|.|.+++.+|+|.|.|.+.+..
T Consensus 161 C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 161 CTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp EECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred EEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 99987 44323499997 2322210 0 00111111 3359999999999999999999876
No 338
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.66 E-value=2.5e-15 Score=125.19 Aligned_cols=169 Identities=11% Similarity=0.127 Sum_probs=105.7
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-CC----------------CCCceeEe--cCCeEEEEEEccC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-AP----------------RPLTSYSI--QDGSTSVARYTPT 77 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l~----------------~~~~~~~~--~~~~~~~l~i~~~ 77 (365)
+....+.+|++++|.|...+.+ .+ .+.|+|+.... .. ...+.... .......|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTN-GVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSL 85 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSC-CEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCC-eEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCC
Confidence 3446789999999999976654 45 89999864210 10 00111111 1233458999999
Q ss_pred CCCCCeEEEEEEEeCCCC---CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCee
Q psy3823 78 SELEYGTLLCWARNEQGN---QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKL 153 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i 153 (365)
+.+|+|.|.|.+.+..+. ....+.|.|.. .+..+|.+.+.... ..+.+|+.++|.|.+.+. |.+..+
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~-----~~~~~P~i~~~~~~----~~~~~g~~v~L~C~~~g~~P~p~~v 156 (215)
T 1c5d_H 86 QTEDTAIYFCTREDGWNYFDYWGPGTMVTVSS-----AQTTAPSVYPLAPG----CGDTTSSTVTLGCLVKGYFPEPVTV 156 (215)
T ss_dssp CGGGCEEEEEEECCSSSCSCCBCCCEEEEECS-----SCCBCCCEEEECCC----SSCCCCSSEEEEEEEEEEBSSCCEE
T ss_pred CcccCEEEEEEEecCCcccceEcCCEEEEecC-----CCCCCCeEEeccCC----hhhccCCcEEEEEEEeeeEcCCcEE
Confidence 999999999999876422 11446788831 01235665544322 235689999999999986 766459
Q ss_pred EEEeCCeEEeeCCCCceEE-----eeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 154 IWTHNGITISNNASAGRII-----TNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 154 ~W~~~~~~l~~~~~~~~~~-----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.|++++..+.......... ....|. ....++ |.|+|.+.|..+.
T Consensus 157 ~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~ 205 (215)
T 1c5d_H 157 TWNSGALSSDVHTFPAVLQSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASS 205 (215)
T ss_dssp EEGGGTTCCSCCBCCCEEETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGT
T ss_pred EEccCCccCceEecCcccCCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCC
Confidence 9999886543211111111 112233 333356 9999999998764
No 339
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.66 E-value=2.4e-15 Score=127.75 Aligned_cols=176 Identities=13% Similarity=0.079 Sum_probs=107.9
Q ss_pred CceEEEEecCCcEEEEEEeCCC--CCcceEEEEeCCCc-CCC-----------------CCCceeEe--cCCeEEEEEEc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDAN--PQAQYFTWAFNNSG-TAP-----------------RPLTSYSI--QDGSTSVARYT 75 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~--p~~~~v~W~~~~~~-~l~-----------------~~~~~~~~--~~~~~~~l~i~ 75 (365)
.+..+.+.+|++++|.|...+. +.. .+.|+|.... .+. ...+.... .......|.|.
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (242)
T 1hxm_B 7 PQISSTKTLSKTARLECVVSGITISAT-SVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIH 85 (242)
T ss_dssp CCSEEEEETTCCEEEEEEEESSCTTTS-CEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEEC
T ss_pred CCceEEecCCCcEEEEEEeCCccccCc-eEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEEC
Confidence 3566788999999999996543 556 9999995421 010 01111111 11135689999
Q ss_pred cCCCCCCeEEEEEEEeCCC-C------CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-
Q psy3823 76 PTSELEYGTLLCWARNEQG-N------QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN- 147 (365)
Q Consensus 76 ~~~~~d~G~Y~C~a~~~~~-~------~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~- 147 (365)
+++.+|+|.|.|.+.+... . ......|.|....... ..+|.+.+... ....+.+|+.++|.|.+.+.
T Consensus 86 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~--~~~p~~~v~~p---~~~~~~~g~~v~L~C~~~g~~ 160 (242)
T 1hxm_B 86 NVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDA--DVSPKPTIFLP---SIAETKLQKAGTYLCLLEKFF 160 (242)
T ss_dssp SCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCS--CCSCBCCCCCC---CGGGGGSSSCEEEEEEEEEES
T ss_pred CCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCC--CcCCCceEECC---ChhhcccCCCceEEEEEeeEE
Confidence 9999999999999987631 1 1135677874211000 01233222211 12345679999999999986
Q ss_pred CCCCeeEEEeCCe-EEeeCC-C-----CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCC
Q psy3823 148 PPYKKLIWTHNGI-TISNNA-S-----AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEG 201 (365)
Q Consensus 148 p~~~~i~W~~~~~-~l~~~~-~-----~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 201 (365)
|.+..+.|++++. .+.... . .+.......|.|..... + |.|+|.+.|..+..
T Consensus 161 P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~ 219 (242)
T 1hxm_B 161 PDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKN 219 (242)
T ss_dssp SCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGG
T ss_pred CCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCC
Confidence 5444599999886 553211 0 11111234678877664 4 99999999988754
No 340
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.66 E-value=3.3e-15 Score=127.65 Aligned_cols=176 Identities=13% Similarity=0.114 Sum_probs=111.4
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-C-------C--------CCCceeEe-cCCeEEEEEEccCCCC
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-A-------P--------RPLTSYSI-QDGSTSVARYTPTSEL 80 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l-------~--------~~~~~~~~-~~~~~~~l~i~~~~~~ 80 (365)
.+..+.+.+|++++|.|... .+.+ .+.|+|..... . . ...+.... .......|.|.+++.+
T Consensus 9 ~p~~v~v~~G~~v~L~C~~~-~~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~ 86 (252)
T 1oga_E 9 SPKYLFRKEGQNVTLSCEQN-LNHD-AMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKN 86 (252)
T ss_dssp SCSEEEEETTCCEEECCEEC-SCCS-EEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSC
T ss_pred cCCeEEEcCCCcEEEEEEeC-CCCC-EEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChh
Confidence 35667899999999999974 4566 99999964210 0 0 00111111 1123347999999999
Q ss_pred CCeEEEEEEEeCCCC---CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEE
Q psy3823 81 EYGTLLCWARNEQGN---QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWT 156 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~ 156 (365)
|+|.|.|.+.+.... ......|.|...-. ...+|.+.+.... ...+.+|+.++|.|.+.+. |.+..+.|+
T Consensus 87 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~---~~~~P~v~~~~~~---~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 160 (252)
T 1oga_E 87 PTAFYLCASSSRSSYEQYFGPGTRLTVTEDLK---NVFPPEVAVFEPS---EAEISHTQKATLVCLATGFYPDHVELSWW 160 (252)
T ss_dssp CCEEEEEEEESSTTSCCEECCCEEEEEESCGG---GCBCCEEEEECCC---HHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred hCEEEEEEEecCCccceeECCCEEEEEecccC---CCCCCeEEEECCC---hhhhccCCceEEEEEEeeEcCCCcEEEEE
Confidence 999999999875211 11345677732100 0246776654321 1245579999999999985 555459999
Q ss_pred eCCeEEeeCCC-------------CceEEeeceEEEeeecC-CCCeEEEEEEEcCCCCC
Q psy3823 157 HNGITISNNAS-------------AGRIITNQTLVLQSVTR-HSGGLYACSAINSQGEG 201 (365)
Q Consensus 157 ~~~~~l~~~~~-------------~~~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~~~~ 201 (365)
+||..+..... .+.......|.|..... ++.|.|+|.+.|.....
T Consensus 161 ~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~ 219 (252)
T 1oga_E 161 VNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 219 (252)
T ss_dssp ETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 99988753211 11112234577776655 36789999999986543
No 341
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.66 E-value=2.1e-16 Score=126.78 Aligned_cols=150 Identities=11% Similarity=0.120 Sum_probs=102.7
Q ss_pred ceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCC----------CCceEE--eeceEEEeeecCCCCeEEEEEEEcCC
Q psy3823 131 VLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNA----------SAGRII--TNQTLVLQSVTRHSGGLYACSAINSQ 198 (365)
Q Consensus 131 ~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~----------~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~ 198 (365)
.+.+|++|+|.|.+. .|.+. |.|++++..+.... ..+... .+++|.|.+++..|+|.|.|.+.+..
T Consensus 6 ~~~~G~~VtL~c~~~-~~~~~-i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~ 83 (171)
T 1ccz_A 6 YGVVYGNVTFHVPSN-VPLKE-VLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNIT 83 (171)
T ss_dssp EEETTCCEEECCCCS-SCCSC-EEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCC
T ss_pred EEEcCCCEEEcCCCC-CCcce-EEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCC
Confidence 567899999999884 35555 99999887553211 112222 35789999999999999999998877
Q ss_pred CCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeC
Q psy3823 199 GEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQD 278 (365)
Q Consensus 199 ~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~ 278 (365)
+ ...+.|.|..+ ...|.+.. ... ...|.|.+.+.|.|. +.|+++|.....
T Consensus 84 ~---~~~~~L~V~~~-------~~~p~i~~--------~~~-~~~L~C~~~~~p~p~-i~W~~~~~~l~~---------- 133 (171)
T 1ccz_A 84 D---TMKFFLYVLEM-------VSKPMIYW--------ECS-NATLTCEVLEGTDVE-LKLYQGKEHLRS---------- 133 (171)
T ss_dssp S---CEEEEEEEECC-------CCCCEEEE--------ETT-TTEEEEECSSCSSCE-EEEEETTEEEEE----------
T ss_pred C---cEEEEEEEECc-------CCCCEEEE--------ecC-CcEEEEEeCCCCCcE-EEEEECCEECcC----------
Confidence 6 46778888711 01233221 111 137999999888887 999998753211
Q ss_pred CCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEE
Q psy3823 279 GSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTF 314 (365)
Q Consensus 279 ~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 314 (365)
.....|.+.+ ..|.|.|+|.|.|..|..+....|
T Consensus 134 ~~~~~l~~~~--~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 134 LRQKTMSYQW--TNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp ESSSEEEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred CcceEEEEec--cCCCceEEEEEEcccCcccceeEE
Confidence 0111243433 678999999999999987765544
No 342
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.66 E-value=1.4e-15 Score=129.27 Aligned_cols=175 Identities=15% Similarity=0.145 Sum_probs=107.7
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEe--CCeEEe----eC----------CCCceEE---eeceEEEeeecCCCCeEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTH--NGITIS----NN----------ASAGRII---TNQTLVLQSVTRHSGGLY 190 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~--~~~~l~----~~----------~~~~~~~---~~~~l~i~~~~~~d~G~Y 190 (365)
..+.+|++|+|.|.+.+.+.+. +.|++ .+..+. .. .+..... .+.+|.|.+++..|+|.|
T Consensus 11 v~v~~G~~v~L~C~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y 89 (245)
T 3nfj_J 11 LVQPVGSPLSLECTVEGTSNPN-LYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFY 89 (245)
T ss_dssp EEEETTCCEEEEEEEESCSSCE-EEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EEecCCCCEEEEEEecCCCCce-EEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEE
Confidence 4678999999999999877766 99998 221110 00 0111111 134799999999999999
Q ss_pred EEEEEcCCC-----CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCCC
Q psy3823 191 ACSAINSQG-----EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNS 264 (365)
Q Consensus 191 ~C~~~~~~~-----~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~ 264 (365)
.|.+.+..| ........|.|.... ....+|.+.........+..|+.+.|.|.+.+. |++..+.|+++|.
T Consensus 90 ~C~~~~~~g~~~~~~~~~~~~~l~V~~~~----~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~ 165 (245)
T 3nfj_J 90 LCAWSVSVGAGVPTIYFGEGSWLTVVEDL----NKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGK 165 (245)
T ss_dssp EEEEECCTTTSSCCCEECCCEEEEEESCG----GGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred EEEEeeccCCCceeEEECCCeEEEEEccc----CCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCE
Confidence 999998332 222234567776100 001255544322222224568999999999985 4442489999886
Q ss_pred CCCCCCCcee--Ee-----eCCCE---EEEEEcCCCccc-CeEEEEEEEcCCccce
Q psy3823 265 DTAPRPLTSY--SI-----QDGST---SVARYTPTSELE-YGTLLCWARNEQGSQR 309 (365)
Q Consensus 265 ~~~~~~~~~~--~~-----~~~~~---s~l~i~~v~~~d-~G~Y~C~a~n~~g~~~ 309 (365)
.......... .. .++.. +.|.|.....+| .|.|+|.|.|......
T Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 166 EVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp EECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred ECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 4432111000 00 23333 468888877777 7799999999876543
No 343
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.66 E-value=1.5e-15 Score=124.50 Aligned_cols=161 Identities=13% Similarity=0.135 Sum_probs=110.7
Q ss_pred cceecCCcEEEEEEEEecCCCC-eeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYK-KLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDL 208 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~-~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l 208 (365)
..+..|++++|.|.+ +.|.|. .|.|++.+..+ ...........|.|.+++.+|+|.|.|.+.+..+.. ++.+.|
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~-~~~~~l 91 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTF-QHTVQL 91 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEE-EEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEecCCccEEEECccCcccCceEEEEEEeCCCce-EEEEEE
Confidence 468899999999999 887772 49999854333 111112235689999999999999999999987654 367899
Q ss_pred EEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCC---ceeEEEeCCCCCCCCCC-ceeE------e-
Q psy3823 209 NINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQA---QYFTWAFNNSDTAPRPL-TSYS------I- 276 (365)
Q Consensus 209 ~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~---~~~~W~~~~~~~~~~~~-~~~~------~- 276 (365)
+|. .+|........ ....|+.. |.|.+.+. |.+ ..+.|++++........ .... .
T Consensus 92 tV~----------~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~ 158 (210)
T 1gsm_A 92 LVY----------AFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQ 158 (210)
T ss_dssp EEE----------BCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCS
T ss_pred EEE----------ecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceeccccccc
Confidence 998 77865443222 36678888 99999985 644 14999999875532211 1011 0
Q ss_pred --eCCC---EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 277 --QDGS---TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 277 --~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
.... .+.|.+.....+|.+.|+|.|.+..-..
T Consensus 159 ~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~ 195 (210)
T 1gsm_A 159 GDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGL 195 (210)
T ss_dssp SCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTE
T ss_pred CCcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCC
Confidence 1111 3456666777777899999999876443
No 344
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.66 E-value=8.2e-15 Score=122.78 Aligned_cols=174 Identities=16% Similarity=0.276 Sum_probs=109.6
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeE---Eee-C-----------CCCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GIT---ISN-N-----------ASAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~---l~~-~-----------~~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++|+|.|.+.+.+ .+. +.|++. +.. +.. . ...+.... +.+|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (223)
T 1dee_B 10 GVVQPGKSLRLSCAASGFTFSGYG-MHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 88 (223)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSC-EEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEEcCCCcEEEEEEecCcccCCce-EEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCH
Confidence 4678999999999998765 244 999983 221 110 0 01122222 34799999999
Q ss_pred CCCeEEEEEEEcCCCC-----CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeE
Q psy3823 185 HSGGLYACSAINSQGE-----GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFT 258 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~-----~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~ 258 (365)
.|+|.|.|.+.+..+. .....+.|.|.. ....+|.+....... .+..|+.++|.|.+.+. |.+..+.
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~------~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~ 161 (223)
T 1dee_B 89 EDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSS------GSASAPTLFPLVSCE-NSNPSSTVAVGCLAQDFLPDSITFS 161 (223)
T ss_dssp GGCEEEEEEEESSSSTTCCEEEECCCEEEEECS------SCCBCCEEEEEECTT-CCCSSSEEEEEEEEEEEBSSCCEEE
T ss_pred HHCEEEEEEEeccccCcccceeecCcEEEEEcc------CCCCCCEEEEecCCc-ccCCCCcEEEEEEEEEEeCCCeEEE
Confidence 9999999999987531 111335677761 000244443211111 15689999999999987 7662399
Q ss_pred EEe-CCCCCCCCCCce-eEeeCCC---EEEEEEcCCCc--ccCeEEEEEEEcCCccceecE
Q psy3823 259 WAF-NNSDTAPRPLTS-YSIQDGS---TSVARYTPTSE--LEYGTLLCWARNEQGSQRTPC 312 (365)
Q Consensus 259 W~~-~~~~~~~~~~~~-~~~~~~~---~s~l~i~~v~~--~d~G~Y~C~a~n~~g~~~~~~ 312 (365)
|++ +|..... .... ....++. .+.|.|..... +|.|.|+|.|.|..+.....+
T Consensus 162 W~~~~g~~l~~-~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 162 WKYKNNSDISS-TRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp EEETTSCBCSC-EEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred eEccCCCccce-eEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 999 7764432 1000 0011222 35688888776 789999999999998765543
No 345
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.66 E-value=6.9e-16 Score=127.78 Aligned_cols=167 Identities=16% Similarity=0.134 Sum_probs=97.5
Q ss_pred ecCCcEEEEEEEEecCC---CCeeEEEeCCeEEeeCCC-CceEEeeceEEE------eeecCCCCeEEEEEEEcCCCCCC
Q psy3823 133 NEGVDIYFDCHIQANPP---YKKLIWTHNGITISNNAS-AGRIITNQTLVL------QSVTRHSGGLYACSAINSQGEGG 202 (365)
Q Consensus 133 ~~g~~v~l~C~~~~~p~---~~~i~W~~~~~~l~~~~~-~~~~~~~~~l~i------~~~~~~d~G~Y~C~~~~~~~~~~ 202 (365)
.+|+++.|.|.+.+.++ ...+.|++++.++..... ......++.+.+ ...+.+|+|.|+|.+.|..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 78999999999998753 235999999987753211 111112233333 33344569999999999876432
Q ss_pred cccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCCCCCCCCC-CceeEeeCCC
Q psy3823 203 STPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSDTAPRP-LTSYSIQDGS 280 (365)
Q Consensus 203 s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~~~~~~~-~~~~~~~~~~ 280 (365)
....+... .....+|.+........ ...|..+.|.|.+.|. |++..+.|+++|....... .......++.
T Consensus 96 -~~~~v~~~------~~~~~~P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt 167 (207)
T 1l6x_A 96 -IEKTISKA------KGQPREPQVYTLPPSRD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGS 167 (207)
T ss_dssp -EEEEECCC------CSCCBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSC
T ss_pred -eEEEeccC------CCCCcCCEEEEECCChH-HhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCC
Confidence 11122110 00114565543222211 2345669999999986 4432499999986432110 0111133443
Q ss_pred E---EEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 281 T---SVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 281 ~---s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
. +.|.|.....+|.|.|+|.|.|....
T Consensus 168 ~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 168 FFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp EEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 3 33556555556799999999998654
No 346
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.65 E-value=6.4e-15 Score=125.05 Aligned_cols=180 Identities=13% Similarity=0.123 Sum_probs=109.3
Q ss_pred cceecCCcEEEEEEEEec--CCCCeeEEEeC--CeE---Ee-eC-----------CCCceEE------eeceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQAN--PPYKKLIWTHN--GIT---IS-NN-----------ASAGRII------TNQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~--p~~~~i~W~~~--~~~---l~-~~-----------~~~~~~~------~~~~l~i~~~~~ 184 (365)
..+.+|++++|.|.+.+. +.+. +.|+++ +.. +. .. ...+... .+.+|.|.+++.
T Consensus 11 v~~~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 89 (242)
T 1hxm_B 11 STKTLSKTARLECVVSGITISATS-VYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEK 89 (242)
T ss_dssp EEEETTCCEEEEEEEESSCTTTSC-EEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCG
T ss_pred EEecCCCcEEEEEEeCCccccCce-EEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCc
Confidence 357899999999999875 4444 999983 221 11 00 1122222 135799999999
Q ss_pred CCCeEEEEEEEcCCC-C-----CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CC-Cce
Q psy3823 185 HSGGLYACSAINSQG-E-----GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQ-AQY 256 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~-~-----~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~ 256 (365)
.|+|.|.|.+.+... . .......|.|..... ....+|...........+..|+.++|.|.+.+. |. +.
T Consensus 90 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~---~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~- 165 (242)
T 1hxm_B 90 QDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQL---DADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIK- 165 (242)
T ss_dssp GGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCC---CSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEE-
T ss_pred ccCEEEEEeeecCCccccccceeEcCcEEEEEccccc---CCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeE-
Confidence 999999999987631 1 112345677761000 000023222111111225679999999999986 54 45
Q ss_pred eEEEeCCC-CCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEE
Q psy3823 257 FTWAFNNS-DTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHV 316 (365)
Q Consensus 257 ~~W~~~~~-~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 316 (365)
+.|++++. .............++. .+.|.|..+.. + |.|+|.|.|..+.......+.+
T Consensus 166 v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 166 IHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred EEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 99999986 3321110111122332 25688887764 5 9999999999998766666655
No 347
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.65 E-value=3.1e-16 Score=132.67 Aligned_cols=200 Identities=18% Similarity=0.160 Sum_probs=106.6
Q ss_pred eEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccc-eecCCcEEEEEEEEecC---CCCeeEEEeC
Q psy3823 83 GTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASV-LNEGVDIYFDCHIQANP---PYKKLIWTHN 158 (365)
Q Consensus 83 G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~g~~v~l~C~~~~~p---~~~~i~W~~~ 158 (365)
|.|.|...+..+....... ..+|.+.+.+.+. .. +..|+.++|.|.+.|.. .+..|.|++|
T Consensus 1 ~~~~~~~~~~~~~c~~~~~------------~~~P~v~i~~ps~---~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~ 65 (240)
T 4acp_A 1 GTKSCDKTHTCPPCPAPEL------------LGGPSVFLFPPKP---KDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD 65 (240)
T ss_dssp ----------------------------------CEEEEECCCH---HHHHSSSSCCEEEEEEESCCC--CCCEEEEEET
T ss_pred CceeeeeeecCCCCCcccc------------CCCCEEEEECcCh---HHhcccCCCcEEEEEEeccccCCCccEEEEEEC
Confidence 6899998876553111100 2356666655431 23 55799999999999864 3546999999
Q ss_pred CeEEeeCCC-------CceEEeeceEEEeeecCCCCeEEEEEEEcCCCCC-CcccEEEEEeeeeecccccCCCCceecCc
Q psy3823 159 GITISNNAS-------AGRIITNQTLVLQSVTRHSGGLYACSAINSQGEG-GSTPFDLNINKMVNLIFNSIDEPVCKQSQ 230 (365)
Q Consensus 159 ~~~l~~~~~-------~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~s~~~~l~v~~~~~~~~~~~~~p~~~~~~ 230 (365)
|..+..... .+.....+.|.|.....+|.|.|+|.+.+..+.. ....+.+.+ ....+|.+....
T Consensus 66 g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~--------~~~~~P~V~v~~ 137 (240)
T 4acp_A 66 GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK--------GQPREPQVYTLP 137 (240)
T ss_dssp TEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCC--------SCCBCCEEEEEC
T ss_pred CcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccC--------CCCCCCEEEEEC
Confidence 998843211 1111123467777777788999999999987632 212221101 111456554332
Q ss_pred cceeeeecCceEEEEEEEeee-CCCceeEEEeCCCCCCCCC-CceeEeeCCCE---EEEEEcCCCcccCeEEEEEEEcCC
Q psy3823 231 QRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSDTAPRP-LTSYSIQDGST---SVARYTPTSELEYGTLLCWARNEQ 305 (365)
Q Consensus 231 ~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~~~~~~~-~~~~~~~~~~~---s~l~i~~v~~~d~G~Y~C~a~n~~ 305 (365)
.... ...|+.++|.|.+.++ |.+..+.|+++|....... .......+++. +.|.+.....++.|.|+|.|.|..
T Consensus 138 ~~~~-~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 138 PSRD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp CCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred CChH-HhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 2211 2348899999999985 5543599999987532110 00111334443 456666655567899999999975
Q ss_pred c
Q psy3823 306 G 306 (365)
Q Consensus 306 g 306 (365)
-
T Consensus 217 l 217 (240)
T 4acp_A 217 L 217 (240)
T ss_dssp S
T ss_pred C
Confidence 3
No 348
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.65 E-value=1.3e-15 Score=130.63 Aligned_cols=172 Identities=9% Similarity=0.082 Sum_probs=102.0
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEe---CCe-E-EeeCC----------C---CceE-----EeeceEEEeeecCCC
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTH---NGI-T-ISNNA----------S---AGRI-----ITNQTLVLQSVTRHS 186 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~---~~~-~-l~~~~----------~---~~~~-----~~~~~l~i~~~~~~d 186 (365)
..+.+|++|+|.|.+.+.+.+. +.|++ +.. . +.... . .... ....+|.|.+++.+|
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 90 (259)
T 3omz_A 12 VIRQTGSSAEITCDLAEGSTGY-IHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIEND 90 (259)
T ss_dssp EEEETTCCEEEECCC-----CE-EEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGG
T ss_pred eEecCCCcEEEEEEEccCCCcE-EEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCccc
Confidence 4678999999999999877665 99998 211 1 11000 0 1111 113469999999999
Q ss_pred CeEEEEEEEcCCCC--CCcccEEEEEeeeeecc-------cccCCCCceecCccceeeeecCceEEEEEEEeee-CCCce
Q psy3823 187 GGLYACSAINSQGE--GGSTPFDLNINKMVNLI-------FNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQY 256 (365)
Q Consensus 187 ~G~Y~C~~~~~~~~--~~s~~~~l~v~~~~~~~-------~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~ 256 (365)
+|.|.|.+.+..+. .......|.|....... ......|.+...+.. ..+.+|+.++|.|.+.+. |.+.
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~- 168 (259)
T 3omz_A 91 SGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSS-VSMPVRKAVTLNCLYETSWWSYY- 168 (259)
T ss_dssp CEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCC-EEEETTCCEEECCEEECCCSSCE-
T ss_pred CEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCE-EEEcCCCCEEEEEECCCccCCce-
Confidence 99999999987652 22244567776210000 000002334433333 338899999999988774 6676
Q ss_pred eEEEeCCCCCCCC-------------CCceeEe--eCCCEEEEEEcCCCcccCeEEEEEEEcC
Q psy3823 257 FTWAFNNSDTAPR-------------PLTSYSI--QDGSTSVARYTPTSELEYGTLLCWARNE 304 (365)
Q Consensus 257 ~~W~~~~~~~~~~-------------~~~~~~~--~~~~~s~l~i~~v~~~d~G~Y~C~a~n~ 304 (365)
+.|++.+...... ..++... .......|.|.+++.+|+|.|.|.+.+.
T Consensus 169 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 169 IFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp EEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred EEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 9999854311110 0111111 1233456999999999999999999854
No 349
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.65 E-value=2.6e-15 Score=128.39 Aligned_cols=171 Identities=10% Similarity=0.083 Sum_probs=107.2
Q ss_pred ceEEEEecCCcEEEEEEeCCC--CCcceEEEEeCCCc----CC-----C---------CCCceeEe--cCCeEEEEEEcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDAN--PQAQYFTWAFNNSG----TA-----P---------RPLTSYSI--QDGSTSVARYTP 76 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~--p~~~~v~W~~~~~~----~l-----~---------~~~~~~~~--~~~~~~~l~i~~ 76 (365)
+....+.+|++++|.|...+. +.. .+.|||.... .+ . ...+.... ......+|.|.+
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSF-AMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSS 85 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECS
T ss_pred CCCEEECCCCcEEEEEEeeCccccCc-eEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 345678999999999996442 344 8999985321 00 0 00111111 223455799999
Q ss_pred CCCCCCeEEEEEEEeCCCC----CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCC
Q psy3823 77 TSELEYGTLLCWARNEQGN----QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYK 151 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~~~----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~ 151 (365)
++.+|+|.|.|.+.+.... ......|.|.. ....+|.+..... ...+.+|+.++|.|.+.+ .|.+.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~P~i~~~~~----~~~~~~g~~v~L~C~~~g~~P~~~ 156 (253)
T 3liz_H 86 LKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSA-----AKTTPPSVYPLAP----GSAAQTNSMVTLGCLVKGYFPEPV 156 (253)
T ss_dssp CCGGGCEEEEEEECCBTTTBCCEECCCEEEEECS-----SCCBCCEEEEECC----------CCEEEEEEEEEEEBSSCC
T ss_pred CChhhCEEEEEEEecCCcceeeEECCCEEEEEec-----cCCCCCeEEEecC----CcccCCCCcEEEEEEEeeEeCCCe
Confidence 9999999999999875311 12446777721 1124666554332 124567999999999998 66664
Q ss_pred eeEEEeCCeEEeeCCC-----CceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 152 KLIWTHNGITISNNAS-----AGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 152 ~i~W~~~~~~l~~~~~-----~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.+.|++++..+..... .+.....+.|.|.....+| |.|+|.+.|..+.
T Consensus 157 ~v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~ 209 (253)
T 3liz_H 157 TVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 209 (253)
T ss_dssp EEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGT
T ss_pred EEEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCC
Confidence 6999998863210000 0222234678899998889 9999999998764
No 350
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.65 E-value=1.1e-15 Score=136.87 Aligned_cols=168 Identities=14% Similarity=0.237 Sum_probs=107.7
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeEEee---------------CCCCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GITISN---------------NASAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~l~~---------------~~~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++++|.|.+.+.+ .+. +.|+++ +..+.. ....+.... ..+|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (344)
T 1za6_B 10 EVVKPGASVKISCKASGYTFTDHA-IHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRS 88 (344)
T ss_dssp EEECTTCCEEEEEEEESSCTTSSC-EEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred eEEeCCCcEEEEEEcCCccccccE-EEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCc
Confidence 3578999999999999863 344 999985 332210 001122221 24899999999
Q ss_pred CCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CC-CceeEEEeC
Q psy3823 185 HSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQ-AQYFTWAFN 262 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-~~~~~W~~~ 262 (365)
+|+|.|.|.+.|..+... ....|.|... ...+|.+....... .+..|+.++|.|.+.|. |. +. +.|+++
T Consensus 89 ~D~G~Y~C~~~n~~~~~~-~~~~l~V~~~------~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~~~~-v~W~k~ 159 (344)
T 1za6_B 89 EDTAVYFCTRSLNMAYWG-QGTLVTVSSA------STKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVT-VSWNSG 159 (344)
T ss_dssp GGCEEEEEEETTTTCEEC-CCEEEEECSS------CCBCCEEEEECCSC-TTTSSSEEEEEEEEEEEBSSCCC-EEETTT
T ss_pred ccCEEEEEEEecCcceec-CcEEEEEecC------CCCCCeEEEccccc-cccCCCcEEEEEEEeeEECCCeE-EEEecC
Confidence 999999999998543222 3456777610 00234443222111 25789999999999987 54 56 999998
Q ss_pred CCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 263 NSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
|..............++. .+.|.|..+..+| |.|+|.|.|..|..
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~ 207 (344)
T 1za6_B 160 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 207 (344)
T ss_dssp TBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTE
T ss_pred CccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 764211100001112222 3468999998888 99999999998864
No 351
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.65 E-value=1.6e-15 Score=128.38 Aligned_cols=181 Identities=15% Similarity=0.171 Sum_probs=109.4
Q ss_pred CCeEEEEcCCccCccc-eecCCcEEEEEEEEec---CCCCeeEEEeCCeEEeeCC-------CCceEEeeceEEEeeecC
Q psy3823 116 KPSVQIKLGRNLNASV-LNEGVDIYFDCHIQAN---PPYKKLIWTHNGITISNNA-------SAGRIITNQTLVLQSVTR 184 (365)
Q Consensus 116 ~p~~~~~~~~~~~~~~-~~~g~~v~l~C~~~~~---p~~~~i~W~~~~~~l~~~~-------~~~~~~~~~~l~i~~~~~ 184 (365)
+|.+.+.+.. ... +.+|++++|.|.+.+. |.+..|.|++++..+.... ..+.......|.|.+++.
T Consensus 15 ~P~v~~~pp~---~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~ 91 (239)
T 1i1c_A 15 VSSVFIFPPK---TKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDW 91 (239)
T ss_dssp --CEEEECCC---HHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHH
T ss_pred CCEEEEECCC---hHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHc
Confidence 4555554432 123 6799999999999986 6664599999887664211 011122345799999999
Q ss_pred CCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCC
Q psy3823 185 HSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNN 263 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~ 263 (365)
+|+|.|+|.+.+..+... ....+... .....+|.+........ ...|+.++|.|.+.|. |++..+.|+++|
T Consensus 92 ~D~g~Y~C~~~~~~~~~~-~~~~v~~~------~~~~~~P~v~v~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g 163 (239)
T 1i1c_A 92 LNGKTFKCKVNSGAFPAP-IEKSISKP------EGTPRGPQVYTMAPPKE-EMTQSQVSITCMVKGFYPPDIYTEWKMNG 163 (239)
T ss_dssp HTTCCEEEEEECSSSSSC-EEEEECCC------SSCCBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred cCCCeEEEEEecccCCCC-cEEEEecC------CCCCcCCEEEEECCChH-HhcCCcEEEEEEEeeeECCCeEEEEEECC
Confidence 999999999999877542 11111110 01114565543222211 2357889999999985 443349999998
Q ss_pred CCCCCCCC-ceeEeeCCCE---EEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 264 SDTAPRPL-TSYSIQDGST---SVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 264 ~~~~~~~~-~~~~~~~~~~---s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
........ ......++.. +.|.|.....+|.|.|+|.|.|....
T Consensus 164 ~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 164 QPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp EECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EECCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 74321110 1112334443 33555555455799999999998654
No 352
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.65 E-value=3.2e-15 Score=128.95 Aligned_cols=173 Identities=12% Similarity=0.068 Sum_probs=102.9
Q ss_pred cceecCCcEEEEEEEEecCC----CCeeEEEeC--CeE---EeeC-------CCCceEEe----eceEEEeeecCCCCeE
Q psy3823 130 SVLNEGVDIYFDCHIQANPP----YKKLIWTHN--GIT---ISNN-------ASAGRIIT----NQTLVLQSVTRHSGGL 189 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~----~~~i~W~~~--~~~---l~~~-------~~~~~~~~----~~~l~i~~~~~~d~G~ 189 (365)
..+.+|++++|.|.+.+.+. ...+.|+++ +.. +... ...+.... ..+|.|.+++.+|+|.
T Consensus 25 ~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 104 (268)
T 1x9q_A 25 LPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDLGV 104 (268)
T ss_dssp ECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHCEE
Confidence 46889999999999987662 234999984 221 1110 01122221 3479999999999999
Q ss_pred EEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCc-------------eecCccceeeeecCceEEEEEEEeeeCC--C
Q psy3823 190 YACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPV-------------CKQSQQRIYGALRNEQVLVSCTVDANPQ--A 254 (365)
Q Consensus 190 Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~-------------~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~ 254 (365)
|.|.+.+..+........|.|....... ....+|. +.........+.+|+.++|.|.+.+.++ +
T Consensus 105 Y~C~~~~~~~~~~~~~~~L~V~~~~~~~-~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 183 (268)
T 1x9q_A 105 YFCSQSTHVPWTFGGGTKLEIKSSADDA-KKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFGHY 183 (268)
T ss_dssp EEEEECSSSSCEECCCEEEC-------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCGGGC
T ss_pred EEEEEecCCCceEcCCEEEEEccCccCC-CccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCcccccc
Confidence 9999998754322234556665110000 0000110 0111111234889999999999988764 5
Q ss_pred ceeEEEeCCCCCC--------------------CCCCceeEee--CCCEEEEEEcCCCcccCeEEEEEEEcC
Q psy3823 255 QYFTWAFNNSDTA--------------------PRPLTSYSIQ--DGSTSVARYTPTSELEYGTLLCWARNE 304 (365)
Q Consensus 255 ~~~~W~~~~~~~~--------------------~~~~~~~~~~--~~~~s~l~i~~v~~~d~G~Y~C~a~n~ 304 (365)
. +.|++++.... ....+..... ......|.|.+++.+|+|.|+|.|.|.
T Consensus 184 ~-v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 184 W-MNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp E-EEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred E-EEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 5 99998532110 0112222221 223567999999999999999999875
No 353
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.64 E-value=4.5e-15 Score=124.99 Aligned_cols=177 Identities=14% Similarity=0.141 Sum_probs=107.6
Q ss_pred CceEEEEecCCcEEEEEEeCCC--CCcceEEEEeCCCcC-CC-------C---------CCceeEe--cCCeEEEEEEcc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDAN--PQAQYFTWAFNNSGT-AP-------R---------PLTSYSI--QDGSTSVARYTP 76 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~--p~~~~v~W~~~~~~~-l~-------~---------~~~~~~~--~~~~~~~l~i~~ 76 (365)
.+..+.+.+|++++|.|...+. +.. .+.|||..... +. . ..+.... .......|.|.+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (230)
T 1ypz_F 7 PEISISRPRDETAQISCKVFIESFRSV-TIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYS 85 (230)
T ss_dssp SCSEEEEETTSCEEEEEEECCGGGGGC-CEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECS
T ss_pred cCCEEEEeCCCcEEEEEEeeccccCcc-EEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECc
Confidence 3566788999999999997553 455 89999864210 10 0 0111111 111445899999
Q ss_pred CCCCCCeEEEEEEEeCC--CCC--cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCC
Q psy3823 77 TSELEYGTLLCWARNEQ--GNQ--RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYK 151 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~--~~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~ 151 (365)
++.+|+|.|.|.+.+.. ... .....|.|........+..+|...+... ....+.+|+.++|.|.+.+. |.+.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p---~~~~v~~g~~~~L~C~~~g~~P~~~ 162 (230)
T 1ypz_F 86 LEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLP---SVAETNLHKTGTYLCLLEAFFPDVI 162 (230)
T ss_dssp CCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECC---CHHHHHHHSCEEEEEEEEEESSCCC
T ss_pred CChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECC---CchhhccCCcceEEEEEeeecCCCe
Confidence 99999999999998741 111 1446788842110000001233333221 22345678999999999986 6555
Q ss_pred eeEEEe-CCeEEeeCCCC------ceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 152 KLIWTH-NGITISNNASA------GRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 152 ~i~W~~-~~~~l~~~~~~------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.+.|++ ||..+...... +.......|.|..... + |.|+|.+.|....
T Consensus 163 ~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 163 RVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp EEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred EEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 699999 88766421110 1111234678877765 4 9999999998764
No 354
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.64 E-value=2.8e-15 Score=126.07 Aligned_cols=172 Identities=13% Similarity=0.186 Sum_probs=107.1
Q ss_pred cceecCCcEEEEEEEEecCC----CCeeEEEeC--CeEE----eeC----------CCCceEEe------eceEEEeeec
Q psy3823 130 SVLNEGVDIYFDCHIQANPP----YKKLIWTHN--GITI----SNN----------ASAGRIIT------NQTLVLQSVT 183 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~----~~~i~W~~~--~~~l----~~~----------~~~~~~~~------~~~l~i~~~~ 183 (365)
..+.+|++++|.|.+.+.+. +. +.|+++ +..+ ... ...+.... +.+|.|.+++
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~~~-v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 88 (228)
T 3bae_H 10 GLLKPSQTLSLTCSFSGFSIRTSKVG-VSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVD 88 (228)
T ss_dssp SEECTTCCEEEEEEEESSCHHHHCCE-EEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCC
T ss_pred eeecCCCeEEEEEEEeCcccCCCcee-EEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCC
Confidence 46789999999999988663 44 999973 2211 110 01122221 3589999999
Q ss_pred CCCCeEEEEEEEcCCCC--------CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCC
Q psy3823 184 RHSGGLYACSAINSQGE--------GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQA 254 (365)
Q Consensus 184 ~~d~G~Y~C~~~~~~~~--------~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~ 254 (365)
..|+|.|.|.+.+..|. .....+.|.|.. ....+|.+........ +..|+.++|.|.+.+. |.+
T Consensus 89 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~------~~~~~P~i~~~~~~~~-~~~g~~~~l~C~~~g~~P~p 161 (228)
T 3bae_H 89 TADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSS------AKTTAPSVYPLAPVCG-DTTGSSVTLGCLVKGYFPEP 161 (228)
T ss_dssp GGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECS------CCCBCCEEEEECC------CCSEEEEEEEEEEEBSSC
T ss_pred cccCEEEEEEEecCCCccccccceeeeCCcEEEEecC------CCCCCCEEEEeccccc-ccCCCCEEEEEEEccEeCCC
Confidence 99999999999987541 111235677661 0012444442221111 5689999999999986 777
Q ss_pred ceeEEEeCCCCCCCCCCceeEeeCC---CEEEEEEcCCCcccCeEEEEEEEcCCccceec
Q psy3823 255 QYFTWAFNNSDTAPRPLTSYSIQDG---STSVARYTPTSELEYGTLLCWARNEQGSQRTP 311 (365)
Q Consensus 255 ~~~~W~~~~~~~~~~~~~~~~~~~~---~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 311 (365)
..+.|++++...... ........+ ..+.|.|..+..++ |.|+|.|.|..|.....
T Consensus 162 ~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~ 219 (228)
T 3bae_H 162 VTLTWNSGSLSSGVH-TFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVD 219 (228)
T ss_dssp CEEEEGGGTCCTTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred EEEEEeeCCcccCce-EcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEE
Confidence 239999987532111 111111122 23568999888766 99999999998876443
No 355
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.64 E-value=1.7e-15 Score=126.13 Aligned_cols=176 Identities=14% Similarity=0.213 Sum_probs=101.2
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeEEe----eC----------CCCceEEe----eceEEEeeecCCCC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GITIS----NN----------ASAGRIIT----NQTLVLQSVTRHSG 187 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~l~----~~----------~~~~~~~~----~~~l~i~~~~~~d~ 187 (365)
..+.+|++|+|.|.+.+.+ .+. +.|++. +.... .. ...+.... ..+|.|.+++..|+
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (215)
T 3nl4_H 9 RLVTPGTPLTLACTVSGFSLNTYS-MFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDT 87 (215)
T ss_dssp CEECTTCCEEEEEEEESSCTTTCC-EEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGC
T ss_pred EEEcCCCcEEEEEEecCcccCCCe-EEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccC
Confidence 4678999999999998632 444 999972 21111 00 01111111 33699999999999
Q ss_pred eEEEEEEEcCCCC---CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCc-eeEEEeCC
Q psy3823 188 GLYACSAINSQGE---GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQ-YFTWAFNN 263 (365)
Q Consensus 188 G~Y~C~~~~~~~~---~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~~W~~~~ 263 (365)
|.|.|.+.+..+. .......|.|.. ....+|.+....... .+..|+.++|.|.+.+.+++. .+.|+++|
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~------~~~~~P~i~~~~~~~-~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g 160 (215)
T 3nl4_H 88 ATYFCVRKYGSEWGGDLWGPGTLVTVSS------GQPKAPSVFPLAPCC-GDTPSSTVTLGCLVKGYLPEPVTVTWNSGT 160 (215)
T ss_dssp EEEEEEEECSSSSCEEEECCCEEEEECS------SCCBCCEEEEECCCT-TCCC--CEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred EEEEEEEecCCCccceEEcCCEEEEEeC------CCcCCCEEEEecCCc-cccCCCcEEEEEEEeeeeCCCeEEEEeeCC
Confidence 9999999987542 122345566651 001344444222111 256799999999999875433 47799987
Q ss_pred CCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEEE
Q psy3823 264 SDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCTF 314 (365)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 314 (365)
..............++.........+...| |.|+|.|.|..|.......|
T Consensus 161 ~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l 210 (215)
T 3nl4_H 161 LTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTV 210 (215)
T ss_dssp BCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEEC
T ss_pred EECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEec
Confidence 533211111122334444332223455567 99999999998876554444
No 356
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.64 E-value=9.8e-16 Score=129.15 Aligned_cols=183 Identities=13% Similarity=0.136 Sum_probs=112.0
Q ss_pred CCCeEEEEcCCccCccceecCCcEEEEEEEEec-CC-CCeeEEEeCCeEE-eeCCC------CceEEeeceEEEeeecCC
Q psy3823 115 DKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PP-YKKLIWTHNGITI-SNNAS------AGRIITNQTLVLQSVTRH 185 (365)
Q Consensus 115 ~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~-~~~i~W~~~~~~l-~~~~~------~~~~~~~~~l~i~~~~~~ 185 (365)
.+|.+.+... ....+.+|+.++|.|.+.+. |. +..+.|+++|..+ ..... .+.......|.|.++..+
T Consensus 11 ~~P~v~~~~p---~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~ 87 (231)
T 2w59_A 11 SPIQLYAIPP---SPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWL 87 (231)
T ss_dssp -CCEEEEECC---CHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHH
T ss_pred CCCEEEEeCc---ChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhcc
Confidence 3566554432 22356799999999999985 53 4359999998776 22111 111122457999999999
Q ss_pred CCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeCCC
Q psy3823 186 SGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNS 264 (365)
Q Consensus 186 d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~~~ 264 (365)
|+|.|+|.+.|..+. ..+.+.+.... ....+|.+........ ...+..++|.|.+.+++++ ..+.|+++|.
T Consensus 88 D~g~Y~C~~~~~~~~---~~~~~~v~~~~----~~~~~P~v~v~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~ 159 (231)
T 2w59_A 88 SGERFTCTVQHEELP---LPLSKSVYRNT----GPTTPPLIYPFAPHPE-ELSLSRVTLSCLVRGFRPRDIEIRWLRDHR 159 (231)
T ss_dssp TTCCEEEEEECTTCS---SCEEEEECCCC----SCCBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred CCCEEEEEEEcCCCC---CceEEEEecCC----CCCcCCEEEEeCCCHH-HhccCceEEEEEEEeccCCCcEEEEEECCE
Confidence 999999999987753 23445553100 0002454432211111 1234579999999986432 2499999987
Q ss_pred CCCCCCC-c--eeEe--------eC-CC---EEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 265 DTAPRPL-T--SYSI--------QD-GS---TSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 265 ~~~~~~~-~--~~~~--------~~-~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
....... . .... .+ +. .+.|.|.....+|.|.|+|.|.|.....
T Consensus 160 ~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~~ 218 (231)
T 2w59_A 160 AVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALPM 218 (231)
T ss_dssp ECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTSTT
T ss_pred ECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCCC
Confidence 5432210 0 0111 23 43 2568888877888999999999987653
No 357
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.64 E-value=5.1e-16 Score=125.56 Aligned_cols=152 Identities=13% Similarity=0.160 Sum_probs=101.0
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeC-CeEEee---------C-CC--CceEE--eeceEEEeeecCCCCeEEEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHN-GITISN---------N-AS--AGRII--TNQTLVLQSVTRHSGGLYACSA 194 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~-~~~l~~---------~-~~--~~~~~--~~~~l~i~~~~~~d~G~Y~C~~ 194 (365)
..+.+|++|+|.|...+..+...|.|+++ +..+.. . .. .+... .+++|.|.+++..|+|.|.|.+
T Consensus 9 v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C~v 88 (180)
T 2dru_A 9 VNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMRM 88 (180)
T ss_dssp EEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEEEE
T ss_pred EEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEEEE
Confidence 46789999999998754222344999994 433321 0 11 22333 3678999999999999999999
Q ss_pred EcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEE-eeeCCCceeEEEeCCCCCCCCCCce
Q psy3823 195 INSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTV-DANPQAQYFTWAFNNSDTAPRPLTS 273 (365)
Q Consensus 195 ~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~~W~~~~~~~~~~~~~~ 273 (365)
.+.. .....+.|.|. .++. .+.. ...+..++|.|.+ .+ |.|. +.|++++....
T Consensus 89 ~~~~--~~~~~~~L~V~----------~~~~----~P~i--~~~~~~v~L~C~~~~g-p~p~-i~W~~~~~~l~------ 142 (180)
T 2dru_A 89 LHET--EDQWKITMEVY----------EMVS----KPMI--YWECSNATLTCEVLEG-TDVE-LKLYQGKEHLR------ 142 (180)
T ss_dssp ESSS--EEEEEEEEEEE----------CCCC----CCEE--EEEGGGTEEEEECSSC-TTCE-EEEEETTEEEE------
T ss_pred EcCC--eEEEEEEEEEE----------CCCC----CCEE--EecCCCEEEEEEeCCC-CCCE-EEEEECCeECc------
Confidence 8765 33356777777 3221 0111 1234669999999 55 8887 99999876421
Q ss_pred eEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEE
Q psy3823 274 YSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCT 313 (365)
Q Consensus 274 ~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 313 (365)
.... ..|.+.. .+|+|.|+|.|.|..|..+....
T Consensus 143 --~~~~--~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 143 --SLRQ--KTMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp --EESS--SEEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred --CCCC--CEEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 0111 2355533 68999999999999998765443
No 358
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.64 E-value=3.9e-15 Score=126.14 Aligned_cols=173 Identities=11% Similarity=0.158 Sum_probs=105.7
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEe--------------CCeEEeeCC-CCceEEe-----eceEEEeeecCCCCeE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTH--------------NGITISNNA-SAGRIIT-----NQTLVLQSVTRHSGGL 189 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~--------------~~~~l~~~~-~~~~~~~-----~~~l~i~~~~~~d~G~ 189 (365)
..+.+|+++.|.|.+.+ +.+. +.|++ ++....... ..+.... +.+|.|.+++..|+|.
T Consensus 12 v~v~~G~~v~L~C~~~~-~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~ 89 (240)
T 3q5y_A 12 IIKEKGGRSVLTCIPIS-GHSN-VVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAM 89 (240)
T ss_dssp EEEETTCCEEEEEECCT-TCCE-EEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEE
T ss_pred eeecCCCcEEEEEEeCC-CCce-EEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEE
Confidence 46789999999999865 5554 99998 222221111 1122211 3479999999999999
Q ss_pred EEEEEEcC--CCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCCceeEEEeCCCCC
Q psy3823 190 YACSAINS--QGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNNSDT 266 (365)
Q Consensus 190 Y~C~~~~~--~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~W~~~~~~~ 266 (365)
|.|.+.+. ..........|.|.... ....+|.+.........+..|+.++|.|.+.+ .|.+..+.|+++|...
T Consensus 90 Y~C~~~~~~~~~~~~~~~~~l~V~~~~----~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l 165 (240)
T 3q5y_A 90 YFCASSLRWGDEQYFGPGTRLTVLEDL----RNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEV 165 (240)
T ss_dssp EEEEEESSTTBCCEECCCEEEEEESCG----GGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEccCCCcceEEcCCEEEEEeccc----cCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEEC
Confidence 99999843 22222244566665100 01134444322222222556899999999998 4555248999988644
Q ss_pred CCCCCc---eeEeeCCCE---EEEEEcCCCccc-CeEEEEEEEcCCccc
Q psy3823 267 APRPLT---SYSIQDGST---SVARYTPTSELE-YGTLLCWARNEQGSQ 308 (365)
Q Consensus 267 ~~~~~~---~~~~~~~~~---s~l~i~~v~~~d-~G~Y~C~a~n~~g~~ 308 (365)
...... .....++.. +.|.|.....+| .|.|+|.|.|.....
T Consensus 166 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~~ 214 (240)
T 3q5y_A 166 HSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSE 214 (240)
T ss_dssp CTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred cCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 321110 111223332 348898888888 779999999987543
No 359
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.63 E-value=1e-14 Score=122.94 Aligned_cols=178 Identities=19% Similarity=0.284 Sum_probs=106.9
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--Ce---EEe-eC----------CCCceEEe------eceEEEeeecCC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GI---TIS-NN----------ASAGRIIT------NQTLVLQSVTRH 185 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~---~l~-~~----------~~~~~~~~------~~~l~i~~~~~~ 185 (365)
..+.+|++++|.|.+.+.+ .+. +.||+. +. .+. .. ...+.... +.+|.|.+++..
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (232)
T 1dn0_B 10 GLLKPSETLSLTCAVYGGSFSDYY-WSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAA 88 (232)
T ss_dssp CEECTTSCEEEEEEEESSCCSSCC-EEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEEeCCCcEEEEEEEccccCCCce-EEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcc
Confidence 3678999999999998764 344 999983 22 111 00 01222221 238999999999
Q ss_pred CCeEEEEEEEcCC--CC---CCcccEEEEEeeeeecccccCCCCceecCccceeeeecC-ceEEEEEEEeee-CCCceeE
Q psy3823 186 SGGLYACSAINSQ--GE---GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRN-EQVLVSCTVDAN-PQAQYFT 258 (365)
Q Consensus 186 d~G~Y~C~~~~~~--~~---~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g-~~~~l~C~~~~~-p~~~~~~ 258 (365)
|+|.|.|.+.+.. +. .......|.|... ...+|.+........ +..| +.++|.|.+.+. |.+..+.
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~------~~~~P~v~~~~p~~~-~~~g~~~v~L~C~~~g~~P~p~~v~ 161 (232)
T 1dn0_B 89 DTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSG------SASAPTLFPLVSCEN-SPSDTSSVAVGCLAQDFLPDSITFS 161 (232)
T ss_dssp GCEEEEEEECSSTTSCSCCSEECCCEEEEECSS------CCBCCEEEEEECC-------CCSEEEEEEEEEEBSSCCEEE
T ss_pred cCEEEEEEEecCCcCCchhhhcccceEEEEccC------CCCCCceEEeccccc-cCCCCCcEEEEEEEEEEeCCCeEEE
Confidence 9999999998422 11 1123457777610 002344432111111 4577 899999999886 7662399
Q ss_pred EEe-CCCCCCCCCCce-eEeeCCC---EEEEEEcCCCc--ccCeEEEEEEEcCCccceecEEEEE
Q psy3823 259 WAF-NNSDTAPRPLTS-YSIQDGS---TSVARYTPTSE--LEYGTLLCWARNEQGSQRTPCTFHV 316 (365)
Q Consensus 259 W~~-~~~~~~~~~~~~-~~~~~~~---~s~l~i~~v~~--~d~G~Y~C~a~n~~g~~~~~~~l~v 316 (365)
|++ +|..... .... .....+. .+.|.|..... +|.|.|+|.|.|..+.......+.|
T Consensus 162 W~~~~g~~l~~-~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~ 225 (232)
T 1dn0_B 162 WKYKNNSDISS-TRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPV 225 (232)
T ss_dssp EEETTSCEECC-EEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC
T ss_pred EEcCCCCceee-EEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCC
Confidence 999 7764322 1000 0011222 34688988876 7899999999999998765555544
No 360
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.63 E-value=4.1e-16 Score=149.54 Aligned_cols=167 Identities=18% Similarity=0.322 Sum_probs=114.1
Q ss_pred cceecCCcEEEEEEE-EecCCCCeeEEEeCCeEEeeC-----------CCCceEEeeceEEEeeecCCCCeEEEEEEEcC
Q psy3823 130 SVLNEGVDIYFDCHI-QANPPYKKLIWTHNGITISNN-----------ASAGRIITNQTLVLQSVTRHSGGLYACSAINS 197 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~-~~~p~~~~i~W~~~~~~l~~~-----------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 197 (365)
..+.+|++++|.|.+ .+.|.+. +.|++++..+... ........+++|.|.+++..|+|.|+|.+.|.
T Consensus 376 ~~~~~G~~v~L~C~~~~~~~~~~-v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~ 454 (581)
T 3o3u_N 376 ITARIGEPLVLKCKGAPKKPPQR-LEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMNR 454 (581)
T ss_dssp EEEETTSCEEECCTTCCSSSSCE-EEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEECT
T ss_pred cceecCCcEEEeeeecCCCCCce-EEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEcC
Confidence 356789999999998 5766666 9999976522110 11223334568999999999999999999998
Q ss_pred CCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCce-EEEEEEEee-eCCCceeEEEeCCCCCCCCCCceeE
Q psy3823 198 QGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQ-VLVSCTVDA-NPQAQYFTWAFNNSDTAPRPLTSYS 275 (365)
Q Consensus 198 ~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~-~~l~C~~~~-~p~~~~~~W~~~~~~~~~~~~~~~~ 275 (365)
.+......+.|.|..+ +..|.+...... +..++. +.|.|.+.+ .|.+. +.|+++|...........+
T Consensus 455 ~~~~~~~~~~l~V~~~-------~~~p~i~~~~~~---~~~~~~~~~l~C~~~~~~P~~~-i~W~~~g~~l~~~~~~~~~ 523 (581)
T 3o3u_N 455 NGKETKSNYRVRVYQI-------PGKPEIVDSASE---LTAGVPNKVGTCVSEGSYPAGT-LSWHLDGKPLVPNEKGVSV 523 (581)
T ss_dssp TSCEEEEEEEEEEEBC-------CCCCEEESCCSE---ECTTSCEEEEEEEEEEEBSCCE-EEEEETTEECCTTSTTEEE
T ss_pred CCceeEEEEEEEEEcC-------CCCCEEEcCCcc---cccCCceeEEEEECCCCCCCCe-EEEEECCEECCCCCCeEEE
Confidence 8876446788888711 123444333222 444544 567999988 58887 9999998755443332221
Q ss_pred -----e--eCCC---EEEEEEcCCC-cccCeEEEEEEEcCCccc
Q psy3823 276 -----I--QDGS---TSVARYTPTS-ELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 276 -----~--~~~~---~s~l~i~~v~-~~d~G~Y~C~a~n~~g~~ 308 (365)
. ..+. .+.|.|.+++ .++.|.|+|.|.|..+..
T Consensus 524 ~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 524 KEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp EEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred EeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCCC
Confidence 1 2222 3679999988 444889999999997543
No 361
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.63 E-value=1.2e-14 Score=121.42 Aligned_cols=172 Identities=13% Similarity=0.212 Sum_probs=106.4
Q ss_pred cceecCCcEEEEEEEEecC-CCCeeEEEeC--CeEEe----eCC-------------CCceEEe------eceEEEeeec
Q psy3823 130 SVLNEGVDIYFDCHIQANP-PYKKLIWTHN--GITIS----NNA-------------SAGRIIT------NQTLVLQSVT 183 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p-~~~~i~W~~~--~~~l~----~~~-------------~~~~~~~------~~~l~i~~~~ 183 (365)
..+.+|++|+|.|.+.+.+ ....+.|++. +..+. ... ..+.... ..+|.|.+++
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 89 (221)
T 3m8o_H 10 GLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLK 89 (221)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCC
T ss_pred EEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCC
Confidence 3578999999999998643 2234999972 21110 000 1122221 2269999999
Q ss_pred CCCCeEEEEEEEcCCC-CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCC-CceeEEE
Q psy3823 184 RHSGGLYACSAINSQG-EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQ-AQYFTWA 260 (365)
Q Consensus 184 ~~d~G~Y~C~~~~~~~-~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-~~~~~W~ 260 (365)
..|+|.|.|.+.+... ........|.|.. .....|.+....... ...|+.++|.|.+.+ .|. +..+.|+
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~------~~~~~p~v~~~~~~~--~~~g~~v~L~C~~~~~~P~~~~~v~W~ 161 (221)
T 3m8o_H 90 SDDTAMYYCVIRGDVYNRQWGQGTLVTVSS------ASPTSPKVFPLSLCS--TQPDGNVVIACLVQGFFPQEPLSVTWS 161 (221)
T ss_dssp GGGCEEEEEEEESCTTCCCBBCCEEEEECS------CCCBCCEEEEEECCS--CCCTTEEEEEEEEEEEBSSCSEEEEES
T ss_pred HHHCEEEEEEEECCChhheECCCEEEEEec------CCCCCCeEEEecCcc--cccCCCEEEEEEEEeeECCCCEEEEEE
Confidence 9999999999998642 2333445677651 000234443111111 157899999999998 565 4249999
Q ss_pred eCCCCCCCCCCceeE-eeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccce
Q psy3823 261 FNNSDTAPRPLTSYS-IQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQR 309 (365)
Q Consensus 261 ~~~~~~~~~~~~~~~-~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 309 (365)
++|............ ..++. .+.|.|.++..+|+|.|+|.|.|..+...
T Consensus 162 ~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 162 ESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp CCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred ECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 987644211000011 12232 23589999999999999999999886643
No 362
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.63 E-value=8.7e-16 Score=131.43 Aligned_cols=170 Identities=13% Similarity=0.122 Sum_probs=94.7
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-CC---------C--------CCceeEe--cCCeEEEEEEcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-AP---------R--------PLTSYSI--QDGSTSVARYTP 76 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l~---------~--------~~~~~~~--~~~~~~~l~i~~ 76 (365)
+....+.+|++++|.|...+.+ .+ .+.|||..... +. . ..+.... .......|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSY-AMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSS 85 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGC-CEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEES
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCc-eEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECC
Confidence 3446789999999999976655 45 89999864210 10 0 0111111 113445899999
Q ss_pred CCCCCCeEEEEEEEeCCCC---------C--c--ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEE
Q psy3823 77 TSELEYGTLLCWARNEQGN---------Q--R--TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCH 143 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~~~---------~--~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~ 143 (365)
++.+|+|.|.|.+.+..+. . . ....|.|... +..+|.+.+... ...+.+|+.++|.|.
T Consensus 86 v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~-----~~~~P~v~~~~p----~~~~~~g~~v~L~C~ 156 (257)
T 3bn9_D 86 LRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSA-----STKGPSVFPLAP----SSKSTSGGTAALGCL 156 (257)
T ss_dssp CCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSS-----CCBCCEECCCCC---------------CCCE
T ss_pred CChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCC-----CCcCCcEEEecC----cccccCCCcEEEEEE
Confidence 9999999999999986541 1 1 3457887310 112455433221 123567999999999
Q ss_pred EEec-CCCCeeEEEeCCeEEeeCC------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 144 IQAN-PPYKKLIWTHNGITISNNA------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 144 ~~~~-p~~~~i~W~~~~~~l~~~~------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
+.+. |.+..+.|++++..+.... ..+.......|.|.+...+| |.|+|.+.|...
T Consensus 157 ~~g~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~ 218 (257)
T 3bn9_D 157 VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 218 (257)
T ss_dssp EEEEBSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGG
T ss_pred EeeEECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCC
Confidence 9985 6664699999887632110 11111123467777777777 999999999653
No 363
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.63 E-value=5.8e-15 Score=141.54 Aligned_cols=164 Identities=18% Similarity=0.274 Sum_probs=114.8
Q ss_pred ceEEEEecCCcEEEEEEe-CCCCCcceEEEEeCCCcCCCCC------------CceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 19 QRIYGALRNEQVLVSCTV-DANPQAQYFTWAFNNSGTAPRP------------LTSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~-~~~p~~~~v~W~~~~~~~l~~~------------~~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
.....+.+|++++|.|.. .+.|.+ .++|++++.. +... .......++ +|.|.+++.+|+|.|
T Consensus 373 ~~~~~~~~G~~v~L~C~~~~~~~~~-~v~W~k~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~G~Y 447 (581)
T 3o3u_N 373 AQNITARIGEPLVLKCKGAPKKPPQ-RLEWKLNTGR-TEAWKVLSPQGGGPWDSVARVLPNG---SLFLPAVGIQDEGIF 447 (581)
T ss_dssp CEEEEEETTSCEEECCTTCCSSSSC-EEEEEEEETT-SSSCEECCSCCSSGGGGTSEECTTS---CEEESSCCGGGCEEE
T ss_pred hcccceecCCcEEEeeeecCCCCCc-eEEEEEcCCe-eEEEEecccCCCCCcCCcEEEcCCc---eEEEeccccccCeEE
Confidence 356778999999999996 788888 9999998764 2111 111222334 799999999999999
Q ss_pred EEEEEeCCCCC-cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCc-EEEEEEEEe-cCCCCeeEEEeCCeEE
Q psy3823 86 LCWARNEQGNQ-RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVD-IYFDCHIQA-NPPYKKLIWTHNGITI 162 (365)
Q Consensus 86 ~C~a~~~~~~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~-v~l~C~~~~-~p~~~~i~W~~~~~~l 162 (365)
+|.+.+..+.. ...+.|.|... ...|. +.... ..+.+|+. +.|.|.+.+ +|.+. +.|++||..+
T Consensus 448 ~C~~~n~~~~~~~~~~~l~V~~~------~~~p~--i~~~~----~~~~~~~~~~~l~C~~~~~~P~~~-i~W~~~g~~l 514 (581)
T 3o3u_N 448 RCQAMNRNGKETKSNYRVRVYQI------PGKPE--IVDSA----SELTAGVPNKVGTCVSEGSYPAGT-LSWHLDGKPL 514 (581)
T ss_dssp EEEEECTTSCEEEEEEEEEEEBC------CCCCE--EESCC----SEECTTSCEEEEEEEEEEEBSCCE-EEEEETTEEC
T ss_pred EEEEEcCCCceeEEEEEEEEEcC------CCCCE--EEcCC----cccccCCceeEEEEECCCCCCCCe-EEEEECCEEC
Confidence 99999988876 57788888311 11333 32221 23555544 567999998 57776 9999999988
Q ss_pred eeCCCCceE-------------EeeceEEEeeec-CCCCeEEEEEEEcCCCC
Q psy3823 163 SNNASAGRI-------------ITNQTLVLQSVT-RHSGGLYACSAINSQGE 200 (365)
Q Consensus 163 ~~~~~~~~~-------------~~~~~l~i~~~~-~~d~G~Y~C~~~~~~~~ 200 (365)
......... ...++|.|..+. .++.|.|+|.++|....
T Consensus 515 ~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 515 VPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp CTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred CCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 643322111 113568999888 55689999999998653
No 364
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.62 E-value=5.6e-15 Score=125.54 Aligned_cols=172 Identities=12% Similarity=0.125 Sum_probs=104.7
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEe--------------CCeEEeeCC-C-CceEEe-----eceEEEeeecCCCCe
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTH--------------NGITISNNA-S-AGRIIT-----NQTLVLQSVTRHSGG 188 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~--------------~~~~l~~~~-~-~~~~~~-----~~~l~i~~~~~~d~G 188 (365)
..+.+|++++|.| ..+.+.+. +.|++ ++....... . .+.... +.+|.|.+++..|+|
T Consensus 12 v~v~~G~~v~L~C-~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 89 (245)
T 4ei6_B 12 QIIDMGQMVTLNC-DPVSNHLY-FYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSA 89 (245)
T ss_dssp EEEETTCCEEEEE-ECCTTCCE-EEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCE
T ss_pred EEecCCCCEEEEE-EcCCCCCE-EEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCE
Confidence 4678999999999 55666665 99998 222222211 0 122222 337999999999999
Q ss_pred EEEEEEEcCC---CCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCC-CceeEEEeCCC
Q psy3823 189 LYACSAINSQ---GEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ-AQYFTWAFNNS 264 (365)
Q Consensus 189 ~Y~C~~~~~~---~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~~W~~~~~ 264 (365)
.|.|.+.+.. .........|.|.... ....+|.+.........+..|+.++|.|.+.+.++ +..+.|+++|.
T Consensus 90 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~----~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~ 165 (245)
T 4ei6_B 90 VYFCASSFWGAYAEQFFGPGTRLTVLEDL----KNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 165 (245)
T ss_dssp EEEEEEECSSTTCCCEECCCEEEEEESCG----GGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred EEEEEEccCCCcceEEEcCCcEEEEeccc----CCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCE
Confidence 9999999642 1222244566666100 00024444322212122556999999999998544 42499999876
Q ss_pred CCCCCCCceeE-e-------eCCCE---EEEEEcCCCccc-CeEEEEEEEcCCccc
Q psy3823 265 DTAPRPLTSYS-I-------QDGST---SVARYTPTSELE-YGTLLCWARNEQGSQ 308 (365)
Q Consensus 265 ~~~~~~~~~~~-~-------~~~~~---s~l~i~~v~~~d-~G~Y~C~a~n~~g~~ 308 (365)
...... .... . .++.. +.|.|.....+| .|.|+|.|.|.....
T Consensus 166 ~l~~~~-~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~ 220 (245)
T 4ei6_B 166 EVHSGV-CTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp EECTTE-EECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred ECCCCc-ccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCCC
Confidence 433211 1000 0 13332 348888887778 999999999976554
No 365
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.62 E-value=2.2e-15 Score=129.93 Aligned_cols=173 Identities=14% Similarity=0.141 Sum_probs=105.1
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEe--CCeEE------------eeCC-C-CceEEe-----eceEEEeeecCCCCe
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTH--NGITI------------SNNA-S-AGRIIT-----NQTLVLQSVTRHSGG 188 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~--~~~~l------------~~~~-~-~~~~~~-----~~~l~i~~~~~~d~G 188 (365)
..+.+|++++|.|.+. .+.+. +.|++ .+..+ .... . .+.... +.+|.|.+++..|+|
T Consensus 36 v~v~~G~~v~L~C~~~-~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G 113 (268)
T 3pl6_D 36 KVTEKGKYVELRCDPI-SGHTA-LYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSA 113 (268)
T ss_dssp EEEETTCCEEEEEBCB-TTCCE-EEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCE
T ss_pred EEecCCCCEEEEEEeC-CCCce-EEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCE
Confidence 3578999999999876 34454 99998 22211 1100 0 122221 457999999999999
Q ss_pred EEEEEEEcCC-CCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCc-eeEEEeCCCCC
Q psy3823 189 LYACSAINSQ-GEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQ-YFTWAFNNSDT 266 (365)
Q Consensus 189 ~Y~C~~~~~~-~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~-~~~W~~~~~~~ 266 (365)
.|.|.+.+.. .........|.|.... ....+|.+.........+..|+.++|.|.+.+.+++. .+.|+++|...
T Consensus 114 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~----~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l 189 (268)
T 3pl6_D 114 VYLCATSALGDTQYFGPGTRLTVLEDL----KNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 189 (268)
T ss_dssp EEEEEEESSSSSCEECCCEEEEEESCG----GGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEE
T ss_pred EEEEEEecCCCceeeCCcEEEEEecCc----ccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEEC
Confidence 9999999742 2222244567776100 0012454443222222255699999999999866552 49999988644
Q ss_pred CCCCCce-------eEeeCCCE---EEEEEcCCCccc-CeEEEEEEEcCCccc
Q psy3823 267 APRPLTS-------YSIQDGST---SVARYTPTSELE-YGTLLCWARNEQGSQ 308 (365)
Q Consensus 267 ~~~~~~~-------~~~~~~~~---s~l~i~~v~~~d-~G~Y~C~a~n~~g~~ 308 (365)
....... ....++.. +.|.|.....+| +|.|+|.|.|.....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~ 242 (268)
T 3pl6_D 190 HSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 242 (268)
T ss_dssp CTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred CCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCC
Confidence 3211000 00123322 457787777777 999999999987653
No 366
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.62 E-value=2.1e-16 Score=131.64 Aligned_cols=169 Identities=15% Similarity=0.165 Sum_probs=106.4
Q ss_pred ceEEEEecCCcEEEEEEeCCCCC---cceEEEEeCCCcCCCCCCcee-E-ecC---CeEEEEEEccCCCCCCeEEEEEEE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQ---AQYFTWAFNNSGTAPRPLTSY-S-IQD---GSTSVARYTPTSELEYGTLLCWAR 90 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~---~~~v~W~~~~~~~l~~~~~~~-~-~~~---~~~~~l~i~~~~~~d~G~Y~C~a~ 90 (365)
+....+.+|+.++|.|.+.+.+. + .+.| ++ .. +....... . ..+ .....|.|.+++.+|.|.|+|.+.
T Consensus 11 P~~~~v~~G~~v~L~C~~~g~~p~~~~-~v~W-~~-~~-~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C~~~ 86 (214)
T 1ow0_A 11 PALEDLLLGSEANLTCTLTGLRDASGV-TFTW-TP-SS-GKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAA 86 (214)
T ss_dssp CCHHHHHHCSSCCCEEEETTCCSCCCC-CCCB-SS-CS-SCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEEEC
T ss_pred cChHHhccCCCcEEEEEEeeeECCCCe-EEEE-cC-CC-CCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEEEEe
Confidence 44455789999999999777654 5 8999 44 33 32211000 0 011 134578899999999999999999
Q ss_pred eCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEEeCCeEEeeCCC--
Q psy3823 91 NEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWTHNGITISNNAS-- 167 (365)
Q Consensus 91 ~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~~~~l~~~~~-- 167 (365)
+..+.......+.+ .. ...+|.+.+.+.. ...+.+|+.++|.|.+.|. |++..|.|++||..+.....
T Consensus 87 ~~~~~~~~~~~i~~--~~----~~~~P~v~~~~~~---~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 157 (214)
T 1ow0_A 87 YPESKTPLTATLSK--SG----NTFRPEVHLLPPP---SEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLT 157 (214)
T ss_dssp CSSCSSCEEEEEEC--CS----SCCCCEEEEECCC---TTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEE
T ss_pred cCCCCCceeEeecc--CC----CCCCCEEEecCCC---HHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceee
Confidence 87664433333321 00 1457777665432 1236689999999999985 54446999999988754310
Q ss_pred -CceEE---eec------eEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 168 -AGRII---TNQ------TLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 168 -~~~~~---~~~------~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
..... .++ .|.+.....++.|.|+|.|.|....
T Consensus 158 ~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 158 WASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp CCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred cCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 01122 233 3344444445689999999998653
No 367
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.61 E-value=1.2e-14 Score=131.67 Aligned_cols=166 Identities=14% Similarity=0.138 Sum_probs=109.6
Q ss_pred EecCCcEEEEEEeCCC---CCcceEEEEeCCCcCCCCCCce--eEecCC---eEEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy3823 24 ALRNEQVLVSCTVDAN---PQAQYFTWAFNNSGTAPRPLTS--YSIQDG---STSVARYTPTSELEYGTLLCWARNEQGN 95 (365)
Q Consensus 24 v~~G~~~~l~C~~~~~---p~~~~v~W~~~~~~~l~~~~~~--~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~~ 95 (365)
+.+|+.++|.|.+.+. |....|+|++++.. +...... ....++ ..+.|.|..++.+|.|.|+|.+.+..+.
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 258 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVE-VHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 258 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCcc-ccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCC
Confidence 6789999999996666 44347999999866 4322111 001111 3347999999999999999999987664
Q ss_pred CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCeeEEEeCCeEEeeCCCCc-----
Q psy3823 96 QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKKLIWTHNGITISNNASAG----- 169 (365)
Q Consensus 96 ~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~~~~l~~~~~~~----- 169 (365)
......+.+. . ....+|.+.+.+.. ....+|+.++|.|.+.|. |+...|+|++||..+.......
T Consensus 259 ~~~~~~v~~~-~----~~~~~P~v~v~~~~----~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~ 329 (376)
T 2aty_A 259 APIEKTISKT-K----GRPKAPQLYTIPPP----KEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNT 329 (376)
T ss_pred CceEEEEcCC-C----CCCcCCeEEeeCCC----HHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECC
Confidence 4332233210 0 01457777766533 234468999999999984 4455699999998874321111
Q ss_pred --eEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 170 --RIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 170 --~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
.......|.+.....+|.|.|+|.|.|...
T Consensus 330 dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 330 NESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred CCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 111234577777777889999999998765
No 368
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.61 E-value=4.7e-15 Score=108.80 Aligned_cols=94 Identities=17% Similarity=0.256 Sum_probs=76.5
Q ss_pred CCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEE
Q psy3823 223 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR 302 (365)
Q Consensus 223 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~ 302 (365)
+|.|...+.. ..+.+|+.+.|.|.+.|.|.|. +.|+++|.... ...+..+..++..+.|.|.+++.+|+|.|+|.|.
T Consensus 13 pP~f~~~p~~-~~v~~G~~~~l~C~~~G~P~p~-v~W~k~g~~l~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 89 (107)
T 3knb_B 13 PPCFLRFPRP-VRVVSGAEAELKCVVLGEPPPV-VVWEKGGQQLA-ASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp EEEEEECCCC-EEEETTSCEEEEEEEEEESCCE-EEEEETTEECC-CCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEeCCCc-EEEeCCCcEEEEEEEEEecCCE-EEEEECccccc-ceeeEEEeecCceEEEEEecCChhhCEEEEEEEE
Confidence 4555544444 3388999999999999999998 99999987543 3445555566777889999999999999999999
Q ss_pred cCCccceecEEEEEEcC
Q psy3823 303 NEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 303 n~~g~~~~~~~l~v~~~ 319 (365)
|..|..+.++.|.|..+
T Consensus 90 N~~G~~~~~~~l~V~~p 106 (107)
T 3knb_B 90 NAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp ETTEEEEEEEEEEEEC-
T ss_pred ECCCEEEEEEEEEEEcC
Confidence 99999999999988754
No 369
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.60 E-value=2.2e-14 Score=119.42 Aligned_cols=172 Identities=13% Similarity=0.229 Sum_probs=103.3
Q ss_pred cceecCCcEEEEEEEEecC-CCCeeEEEeC--CeEE----eeC----------CCCceEEe------eceEEEeeecCCC
Q psy3823 130 SVLNEGVDIYFDCHIQANP-PYKKLIWTHN--GITI----SNN----------ASAGRIIT------NQTLVLQSVTRHS 186 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p-~~~~i~W~~~--~~~l----~~~----------~~~~~~~~------~~~l~i~~~~~~d 186 (365)
..+.+|++++|.|.+.+.+ ....+.|+++ +..+ ... ...+.... +.+|.|.+++..|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (215)
T 1c5d_H 10 GLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTED 89 (215)
T ss_dssp CEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGG
T ss_pred eeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCccc
Confidence 4678999999999998764 2233999984 2211 100 01122221 2489999999999
Q ss_pred CeEEEEEEEcCCCC--CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCC
Q psy3823 187 GGLYACSAINSQGE--GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNN 263 (365)
Q Consensus 187 ~G~Y~C~~~~~~~~--~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~ 263 (365)
+|.|.|.+.+..+. .....+.|.|.. ....+|.+........ +..|+.++|.|.+.+. |.+..+.|++++
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~L~V~~------~~~~~P~i~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 162 (215)
T 1c5d_H 90 TAIYFCTREDGWNYFDYWGPGTMVTVSS------AQTTAPSVYPLAPGCG-DTTSSTVTLGCLVKGYFPEPVTVTWNSGA 162 (215)
T ss_dssp CEEEEEEECCSSSCSCCBCCCEEEEECS------SCCBCCCEEEECCCSS-CCCCSSEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CEEEEEEEecCCcccceEcCCEEEEecC------CCCCCCeEEeccCChh-hccCCcEEEEEEEeeeEcCCcEEEEccCC
Confidence 99999999986532 222346777761 0012454442221111 5679999999999986 777239999987
Q ss_pred CCCCCCCCceeEeeCCCEEE-EEEcCCCcccCeEEEEEEEcCCcccee
Q psy3823 264 SDTAPRPLTSYSIQDGSTSV-ARYTPTSELEYGTLLCWARNEQGSQRT 310 (365)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~s~-l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 310 (365)
.......... ....+.... ..+.....+| |.|+|.|.|..|....
T Consensus 163 ~~~~~~~~~~-~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~ 208 (215)
T 1c5d_H 163 LSSDVHTFPA-VLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKV 208 (215)
T ss_dssp TCCSCCBCCC-EEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEE
T ss_pred ccCceEecCc-ccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccE
Confidence 6422111111 112232221 1122444456 9999999999887543
No 370
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.60 E-value=1.4e-14 Score=124.25 Aligned_cols=169 Identities=15% Similarity=0.257 Sum_probs=105.0
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeEEe----eC-----------CCCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GITIS----NN-----------ASAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~l~----~~-----------~~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++|+|.|.+.+.+ .+. +.|+++ +..+. .. ...+.... +.+|.|.+++.
T Consensus 16 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 94 (261)
T 2xqy_G 16 ELVKPGASVKMSCKASGYSFTSYW-MNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTS 94 (261)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSC-EEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred EEEcCCCCEEEEEEeCCcccCCce-EEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCc
Confidence 3578999999999998765 445 999985 22211 00 01122221 35899999999
Q ss_pred CCCeEEEEEEEcCCCC--CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEe
Q psy3823 185 HSGGLYACSAINSQGE--GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAF 261 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~--~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~ 261 (365)
.|+|.|.|.+.+..+. .....+.|.|... ...+|.+....... .+..|+.++|.|.+.+. |.+..+.|++
T Consensus 95 ~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~------~~~~P~v~~~~p~~-~v~~g~~v~L~C~~~g~~P~~i~v~W~k 167 (261)
T 2xqy_G 95 EDSAVYYCGRLGYVYGFDYWGQGTTLTVSSA------KTTAPSVYPLAPVC-GDTTGSSVTLGCLVKGYFPEPVTLTWNS 167 (261)
T ss_dssp GGCEEEEEEEECTTSSEEEECCCEEEEECSS------CCBCCEEEEECCCC-C--CCSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred ccCeEEEEEEecCCCcceEECCCEEEEEccC------CCCCCeEEEeCCCc-cccCCCcEEEEEEEEeEeCCCCEEEEec
Confidence 9999999999986421 1113356777610 00234443222111 25679999999999885 6662499999
Q ss_pred CCCCCCCCCCceeEeeCC---CEEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 262 NNSDTAPRPLTSYSIQDG---STSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~---~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
++............ ..+ ..+.|.|..+..+| |.|+|.|.|.....
T Consensus 168 ~g~~~~~~~~~~~~-~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~ 215 (261)
T 2xqy_G 168 GSLSSGVHTFPAVL-QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASST 215 (261)
T ss_dssp GTCCTTEEECCCEE-ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred CCCcCceEecCcee-cCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCc
Confidence 87642111001111 112 23579999888888 99999999966543
No 371
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.60 E-value=9e-15 Score=125.11 Aligned_cols=169 Identities=13% Similarity=0.220 Sum_probs=92.5
Q ss_pred cceecCCcEEEEEEEEecC--CCCeeEEEeC--CeEEe----eC-----------CCCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKLIWTHN--GITIS----NN-----------ASAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i~W~~~--~~~l~----~~-----------~~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++|+|.|.+.+.+ .+. +.|++. +..+. .. ...+.... ..+|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (257)
T 3bn9_D 10 GLVKPGGSLRLSCAASGFTFSSYA-MSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRA 88 (257)
T ss_dssp EEECTTCEEEEEEEEESSCGGGCC-EEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCG
T ss_pred EEEcCCCcEEEEEEeccccCCCce-EEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 3578999999999998765 344 999984 22111 00 01122221 34799999999
Q ss_pred CCCeEEEEEEEcCCCC------------CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-
Q psy3823 185 HSGGLYACSAINSQGE------------GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN- 251 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~~------------~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~- 251 (365)
.|+|.|.|.+.+..+. .......|.|... ...+|.+........ +..|+.++|.|.+.+.
T Consensus 89 ~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~------~~~~P~v~~~~p~~~-~~~g~~v~L~C~~~g~~ 161 (257)
T 3bn9_D 89 EDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSA------STKGPSVFPLAPSSK-STSGGTAALGCLVKDYF 161 (257)
T ss_dssp GGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSS------CCBCCEECCCCC------------CCCEEEEEB
T ss_pred hhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCC------CCcCCcEEEecCccc-ccCCCcEEEEEEEeeEE
Confidence 9999999999987641 1113356777610 002354432221111 5678999999999986
Q ss_pred CCCceeEEEeCCCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 252 PQAQYFTWAFNNSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 252 p~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
|.+..+.|++++..............++. .+.|.|.++..+| |.|+|.|.|....
T Consensus 162 P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~ 219 (257)
T 3bn9_D 162 PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 219 (257)
T ss_dssp SSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGT
T ss_pred CCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCC
Confidence 76624999998764211100011122332 3457888887778 9999999996544
No 372
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.59 E-value=8.2e-15 Score=124.15 Aligned_cols=171 Identities=13% Similarity=0.174 Sum_probs=105.9
Q ss_pred ceEEEEecCCcEEEEEEeCCCC----CcceEEEEeCCCcC-C------C------CC----------CceeEe--cCCeE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP----QAQYFTWAFNNSGT-A------P------RP----------LTSYSI--QDGST 69 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p----~~~~v~W~~~~~~~-l------~------~~----------~~~~~~--~~~~~ 69 (365)
+....+.+|+.++|.|...+.+ .. .+.||+..... . . .. .+.... .....
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~-~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 85 (239)
T 3tv3_H 7 SGPTLVEASETLSLTCAVSGDSTAACNS-FWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNL 85 (239)
T ss_dssp ESCSEECTTSCEEEEEEEESSCTTSSSC-EEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTE
T ss_pred CCCEEEcCCCCEEEEEEEcCCcccccce-EEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCE
Confidence 3456689999999999954443 34 89999853210 0 0 00 010111 12344
Q ss_pred EEEEEccCCCCCCeEEEEEEEeCCCC-------------CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCC
Q psy3823 70 SVARYTPTSELEYGTLLCWARNEQGN-------------QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGV 136 (365)
Q Consensus 70 ~~l~i~~~~~~d~G~Y~C~a~~~~~~-------------~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 136 (365)
..|.|.+++.+|+|.|.|.+.+..+. ......|.|.. .+..+|.+...... ..+.+|+
T Consensus 86 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~-----~~~~~P~v~~~~~~----~~~~~g~ 156 (239)
T 3tv3_H 86 VFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSS-----ASTKGPSVFPLAPS----SKSTSGG 156 (239)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECC-----CCCBCCEEEEECCC----CCC--TT
T ss_pred EEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeecc-----CCCcCCEEEEECCC----hhhccCC
Confidence 57999999999999999999865320 11334666621 11235665543322 2355799
Q ss_pred cEEEEEEEEe-cCCCCeeEEEeCCeEEeeC------CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 137 DIYFDCHIQA-NPPYKKLIWTHNGITISNN------ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 137 ~v~l~C~~~~-~p~~~~i~W~~~~~~l~~~------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.++|.|.+.+ .|.+..+.|++++..+... ...+.....+.|.|.....+| |.|+|.+.|..+.
T Consensus 157 ~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~ 226 (239)
T 3tv3_H 157 TAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 226 (239)
T ss_dssp EEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGT
T ss_pred cEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCC
Confidence 9999999997 5555557899988633111 111122224578888888888 9999999998753
No 373
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.59 E-value=1.1e-14 Score=105.45 Aligned_cols=95 Identities=13% Similarity=0.149 Sum_probs=75.7
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCC-CceeEeeCCCEEEEEEcCCCcccCeEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRP-LTSYSIQDGSTSVARYTPTSELEYGTLLCW 300 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~-~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~ 300 (365)
.+|.+...+.. ..+.+|+.+.|.|.+.|.|.|. +.|+++|....... .+..+...+..+.|.|.+++.+|+|.|+|.
T Consensus 4 ~PP~i~~~p~~-~~v~~G~~~~l~C~~~g~P~p~-v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 81 (100)
T 3knb_A 4 IPPKIEALPSD-ISIDEGKVLTVACAFTGEPTPE-VTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp EEEEECCCCSE-EEEETTSEEEEEEEEEEESCCE-EEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEeCCCc-EEEeCCCeEEEEEEEEEecCCE-EEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEE
Confidence 34555443333 3489999999999999999998 99999987544322 234556667778899999999999999999
Q ss_pred EEcCCccceecEEEEEEc
Q psy3823 301 ARNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 301 a~n~~g~~~~~~~l~v~~ 318 (365)
|.|..|..+.++.|.|+.
T Consensus 82 a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 82 LGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCEEEEEEEEEEEE
Confidence 999999999998888863
No 374
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.59 E-value=2.4e-15 Score=110.42 Aligned_cols=91 Identities=18% Similarity=0.248 Sum_probs=75.9
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEE
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR 90 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 90 (365)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+ .++|+|++.. +..........++...+|.|.+++.+|+|.|+|.|.
T Consensus 13 pP~f~~-~p~~~~v~~G~~~~l~C~~~G~P~p-~v~W~k~g~~-l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 89 (107)
T 3knb_B 13 PPCFLR-FPRPVRVVSGAEAELKCVVLGEPPP-VVVWEKGGQQ-LAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp EEEEEE-CCCCEEEETTSCEEEEEEEEEESCC-EEEEEETTEE-CCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEe-CCCcEEEeCCCcEEEEEEEEEecCC-EEEEEECccc-ccceeeEEEeecCceEEEEEecCChhhCEEEEEEEE
Confidence 454433 4456778999999999998899999 9999999998 776655444455566789999999999999999999
Q ss_pred eCCCCCcccEEEEE
Q psy3823 91 NEQGNQRTPCTFHV 104 (365)
Q Consensus 91 ~~~~~~~~~~~l~V 104 (365)
|..|.....+.|.|
T Consensus 90 N~~G~~~~~~~l~V 103 (107)
T 3knb_B 90 NAAGEAYAAAAVTV 103 (107)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred ECCCEEEEEEEEEE
Confidence 99998888888988
No 375
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.59 E-value=4.2e-15 Score=125.66 Aligned_cols=166 Identities=16% Similarity=0.185 Sum_probs=103.8
Q ss_pred EecCCcEEEEEEeCCC---CCcceEEEEeCCCcCCCCCCcee--EecCC---eEEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy3823 24 ALRNEQVLVSCTVDAN---PQAQYFTWAFNNSGTAPRPLTSY--SIQDG---STSVARYTPTSELEYGTLLCWARNEQGN 95 (365)
Q Consensus 24 v~~G~~~~l~C~~~~~---p~~~~v~W~~~~~~~l~~~~~~~--~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~~~~~~ 95 (365)
+..|+.++|.|.+.+. |.+..++|++++.. +....... ...++ ..+.|.|.....+|.|.|+|.|.+..+.
T Consensus 36 l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~-l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~ 114 (240)
T 4acp_A 36 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE-VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALP 114 (240)
T ss_dssp HSSSSCCEEEEEEESCCC--CCCEEEEEETTEE-ECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC---
T ss_pred cccCCCcEEEEEEeccccCCCccEEEEEECCcc-cCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCC
Confidence 3459999999996554 43348999999987 64432111 11122 2346888888888899999999987764
Q ss_pred CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-cCCCCeeEEEeCCeEEeeCC-------C
Q psy3823 96 QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-NPPYKKLIWTHNGITISNNA-------S 167 (365)
Q Consensus 96 ~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~p~~~~i~W~~~~~~l~~~~-------~ 167 (365)
......+... . ....+|.+.+.+... ...+|+.++|.|.+.+ +|.+..+.|++||..+.... .
T Consensus 115 ~~~~~~i~~~-~----~~~~~P~V~v~~~~~----~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~ 185 (240)
T 4acp_A 115 APIEKTISKA-K----GQPREPQVYTLPPSR----DELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDS 185 (240)
T ss_dssp -CEEEEECCC-C----SCCBCCEEEEECCCG----GGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECT
T ss_pred cccccccccc-C----CCCCCCEEEEECCCh----HHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECC
Confidence 3322222110 0 014578777765431 2335899999999998 56555699999998864211 1
Q ss_pred CceEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 168 AGRIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 168 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
.+.......|.+.....++.|.|+|.+.+..-
T Consensus 186 dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 186 DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp TSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 11122234566666666789999999998764
No 376
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.58 E-value=1.6e-14 Score=121.79 Aligned_cols=171 Identities=13% Similarity=0.136 Sum_probs=101.7
Q ss_pred eEEEEecCCcEEEEEEeCCCC--Cc-ceEEEEeCCCc----CC-----CCC-----------CceeEe--cCCeEEEEEE
Q psy3823 20 RIYGALRNEQVLVSCTVDANP--QA-QYFTWAFNNSG----TA-----PRP-----------LTSYSI--QDGSTSVARY 74 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p--~~-~~v~W~~~~~~----~l-----~~~-----------~~~~~~--~~~~~~~l~i 74 (365)
....+.+|++++|.|...+.+ .. ..+.|||.... .+ ... .+.... .......|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 87 (232)
T 3qhz_H 8 GPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTM 87 (232)
T ss_dssp CCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEE
T ss_pred CCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEE
Confidence 345689999999999964422 23 13499985321 00 000 011111 1234557999
Q ss_pred ccCCCCCCeEEEEEEEeCCC--------CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe
Q psy3823 75 TPTSELEYGTLLCWARNEQG--------NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA 146 (365)
Q Consensus 75 ~~~~~~d~G~Y~C~a~~~~~--------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 146 (365)
.+++.+|+|.|.|.+.+..+ .......|.|.. .+..+|.+...... ..+..|+.++|.|.+.+
T Consensus 88 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~P~v~~~~~~----~~~~~g~~v~L~C~~~~ 158 (232)
T 3qhz_H 88 TNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSS-----ASTKGPSVFPLAPS----SKSTSGGTAALGCLVKD 158 (232)
T ss_dssp CSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECS-----SCCBCCEEEEECC-----------CEEEEEEEEEE
T ss_pred CcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEec-----CCCCCCEEEEeccc----ccccCCCcEEEEEEEee
Confidence 99999999999999986531 112445677721 11245665533321 24567999999999997
Q ss_pred cCC-CCeeEEEeCCeEEeeC------CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 147 NPP-YKKLIWTHNGITISNN------ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 147 ~p~-~~~i~W~~~~~~l~~~------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.++ +..+.|++++..+... ...+.......|.|.....+| |.|+|.+.|..+.
T Consensus 159 ~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~ 218 (232)
T 3qhz_H 159 YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 218 (232)
T ss_dssp EBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGT
T ss_pred EeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCC
Confidence 543 5457799988633110 111122224578888888888 9999999998754
No 377
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.57 E-value=3.3e-14 Score=121.46 Aligned_cols=178 Identities=13% Similarity=0.196 Sum_probs=106.9
Q ss_pred cceecCCcEEEEEEEEec--CCCCeeEEEeC--Ce--EEe--eC-----------CCCceEEe------eceEEEeeecC
Q psy3823 130 SVLNEGVDIYFDCHIQAN--PPYKKLIWTHN--GI--TIS--NN-----------ASAGRIIT------NQTLVLQSVTR 184 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~--p~~~~i~W~~~--~~--~l~--~~-----------~~~~~~~~------~~~l~i~~~~~ 184 (365)
..+.+|++|+|.|.+.+. +... +.|++. +. ... .. ...+.... +.+|.|.+++.
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (253)
T 3liz_H 10 GLVQPGGSLKLSCAASGFTFSSFA-MSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKS 88 (253)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSC-EEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCG
T ss_pred EEECCCCcEEEEEEeeCccccCce-EEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCCh
Confidence 467899999999999863 2344 999973 11 111 00 01112111 23599999999
Q ss_pred CCCeEEEEEEEcCCC---CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCCceeEEE
Q psy3823 185 HSGGLYACSAINSQG---EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFTWA 260 (365)
Q Consensus 185 ~d~G~Y~C~~~~~~~---~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~W~ 260 (365)
+|+|.|.|.+.+... ........|.|.. .....|.+....... .+..|+.++|.|.+.+ .|.+..+.|+
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~------~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~~~~v~W~ 161 (253)
T 3liz_H 89 EDTAMYYCTRDPAGRAWFAYWGQGTLVTVSA------AKTTPPSVYPLAPGS-AAQTNSMVTLGCLVKGYFPEPVTVTWN 161 (253)
T ss_dssp GGCEEEEEEECCBTTTBCCEECCCEEEEECS------SCCBCCEEEEECC-------CCEEEEEEEEEEEBSSCCEEEEG
T ss_pred hhCEEEEEEEecCCcceeeEECCCEEEEEec------cCCCCCeEEEecCCc-ccCCCCcEEEEEEEeeEeCCCeEEEEE
Confidence 999999999987631 1112335666641 001345444222111 1557999999999998 5656249999
Q ss_pred eCCCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 261 FNNSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
+++........... ...+. .+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 162 ~~~~~~~~~~~~~~-~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 162 SGSLSSGVHTFPAV-LQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp GGTBCTTEEECCCE-EETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred eCCeecceEeCCcc-ccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 98753211000001 11122 2569999999999 99999999998876655555443
No 378
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.57 E-value=1.4e-14 Score=125.73 Aligned_cols=174 Identities=14% Similarity=0.178 Sum_probs=106.7
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCC--eE---Ee--eC----------CCCceEEe-----eceEEEeeecCCCC
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNG--IT---IS--NN----------ASAGRIIT-----NQTLVLQSVTRHSG 187 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~--~~---l~--~~----------~~~~~~~~-----~~~l~i~~~~~~d~ 187 (365)
..+.+|++++|.|.+.+.+.+. +.|+++. .. +. .. ...+.... +.+|.|.+++.+|+
T Consensus 34 v~v~~G~~v~L~C~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 112 (279)
T 2wbj_D 34 VISKSGTSVKIECRSLDFQATT-MFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 112 (279)
T ss_dssp EEEETTSCEEEEEEESSSCEEE-EEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGC
T ss_pred EEecCCCeEEEEEEeCCCCCCe-EEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCC
Confidence 4688999999999997766555 9999853 11 10 00 01122221 34799999999999
Q ss_pred eEEEEEEEcCCCC-----CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCC--CceeEEE
Q psy3823 188 GLYACSAINSQGE-----GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ--AQYFTWA 260 (365)
Q Consensus 188 G~Y~C~~~~~~~~-----~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~~W~ 260 (365)
|.|.|.+.+..+. .......|.|.... ....+|.+.........+..|+.++|.|.+.+.++ +. +.|+
T Consensus 113 G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~----~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~-v~W~ 187 (279)
T 2wbj_D 113 SFYICSARDLTSGANNEQFFGPGTRLTVTEDL----KNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE-LSWW 187 (279)
T ss_dssp EEEEEEEEETTCBTSCCEEECCCEEEEEESCG----GGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEE-EEEE
T ss_pred EEEEEEEcccccCCccceeeCCCEEEEEecCC----CCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcE-EEEE
Confidence 9999999984321 11233567776100 00124544332211112457899999999998744 45 9999
Q ss_pred eCCCCCCCCCCce--eE-----eeCCC---EEEEEEcCCCccc-CeEEEEEEEcCCccce
Q psy3823 261 FNNSDTAPRPLTS--YS-----IQDGS---TSVARYTPTSELE-YGTLLCWARNEQGSQR 309 (365)
Q Consensus 261 ~~~~~~~~~~~~~--~~-----~~~~~---~s~l~i~~v~~~d-~G~Y~C~a~n~~g~~~ 309 (365)
++|.......... .. ..++. .+.|.|.+...+| .|.|+|.|.|......
T Consensus 188 k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~~ 247 (279)
T 2wbj_D 188 VNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 247 (279)
T ss_dssp ETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCTT
T ss_pred ECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCCC
Confidence 9886443221100 00 12333 2458888877664 7789999999876554
No 379
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.57 E-value=4.9e-14 Score=138.79 Aligned_cols=195 Identities=12% Similarity=0.113 Sum_probs=129.4
Q ss_pred cCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeee-cCCCCeEEEEEEEcCCCCCCcccEEEEEee
Q psy3823 134 EGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSV-TRHSGGLYACSAINSQGEGGSTPFDLNINK 212 (365)
Q Consensus 134 ~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~-~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~ 212 (365)
.+..+.|.|.+.|.|.+. +.|.++|..+.. .....+.|..+ .....+.|.|.+.+..|......+.+...
T Consensus 90 ~~g~l~v~c~~~g~P~p~-i~W~k~g~~~~~-------~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~- 160 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLGN-PIWNISGDPTRT-------WNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGH- 160 (731)
T ss_dssp CSEEEEEEEEETTCCCCS-EEEEECCCCCSS-------CEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESS-
T ss_pred CcceEEEEEecCCCCccc-eeEEEeCCcCCc-------eeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeec-
Confidence 346899999999998888 999999876532 11234445443 22334778887666666432222222211
Q ss_pred eeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeE-EE--eCCCCCCCCCCceeEeeCCCEEEEEEcCC
Q psy3823 213 MVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFT-WA--FNNSDTAPRPLTSYSIQDGSTSVARYTPT 289 (365)
Q Consensus 213 ~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~-W~--~~~~~~~~~~~~~~~~~~~~~s~l~i~~v 289 (365)
....+|.+... .. ..+..|+.+.|.|.+.|.|.|. +. |+ ++|..... .....+......+.|.|.++
T Consensus 161 ------~~~~~p~~~~~-~~-~~v~~G~~v~l~C~~~g~P~p~-i~~W~~~~~g~~l~~-~~~~~~~~~~~~~~l~I~~~ 230 (731)
T 2v5y_A 161 ------PCTRTPHFLRI-QN-VEVNAGQFATFQCSAIGRTVAG-DRLWLQGIDVRDAPL-KEIKVTSSRRFIASFNVVNT 230 (731)
T ss_dssp ------CCSSSCEECCC-CC-EEEETTSCEEEEEEEESCCCTT-CEEEEEESSSCCEEE-EEEEECCSSEEEEEEEECSC
T ss_pred ------ccccccccccc-cc-eEEeCCCcEEEEEEeCCCCCCc-eeEEEecCCCccccc-cceEEeccccceEEEEEccc
Confidence 00134555532 22 4488999999999999999998 87 77 45542211 00011112223467999999
Q ss_pred CcccCeEEEEEEEcCCcc-ceecEEEEEEcCcc------------------cc--------------c------------
Q psy3823 290 SELEYGTLLCWARNEQGS-QRTPCTFHVVKAGE------------------CE--------------H------------ 324 (365)
Q Consensus 290 ~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~------------------c~--------------~------------ 324 (365)
..+|.|.|+|.|.|..|. .+..+.|.|..++. |. +
T Consensus 231 ~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~~~~ 310 (731)
T 2v5y_A 231 TKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDR 310 (731)
T ss_dssp CTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSCEEE
T ss_pred ccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCceEE
Confidence 999999999999999997 67777777753322 11 0
Q ss_pred -----------cCccccEEEEEEEEE--cCCCCCce
Q psy3823 325 -----------PVAVSHRYVAKLYAT--NAKGAGPM 347 (365)
Q Consensus 325 -----------~l~~~~~~~~~~~~~--n~~g~s~~ 347 (365)
+|.|+..|.++|.|. |..|.|.+
T Consensus 311 ~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~ 346 (731)
T 2v5y_A 311 QPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSP 346 (731)
T ss_dssp EECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCB
T ss_pred eccCcceEEEeCCCCCCEEEEEEEEEecCCCccccC
Confidence 799999999999999 99998763
No 380
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.55 E-value=7.2e-14 Score=126.49 Aligned_cols=165 Identities=10% Similarity=0.106 Sum_probs=107.1
Q ss_pred eecCCcEEEEEEEEec---CCCCeeEEEeCCeEEeeCC-------CCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCC
Q psy3823 132 LNEGVDIYFDCHIQAN---PPYKKLIWTHNGITISNNA-------SAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEG 201 (365)
Q Consensus 132 ~~~g~~v~l~C~~~~~---p~~~~i~W~~~~~~l~~~~-------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 201 (365)
+.+|+.++|.|.+.+. |.+..|.|++++..+.... ..........|.|..++.+|+|.|+|.+.+..+..
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 6789999999999987 4444699999886653211 01112224579999999999999999999887643
Q ss_pred C-cccEEE--EEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCC-ceeEEEeCCCCCCCCCC-ceeEe
Q psy3823 202 G-STPFDL--NINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQA-QYFTWAFNNSDTAPRPL-TSYSI 276 (365)
Q Consensus 202 ~-s~~~~l--~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~-~~~~W~~~~~~~~~~~~-~~~~~ 276 (365)
. ...+.+ .+. .+|.+........ ...|+.++|.|.+.+++++ ..+.|+++|........ .....
T Consensus 260 ~~~~~v~~~~~~~----------~~P~v~v~~~~~~-~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~ 328 (376)
T 2aty_A 260 PIEKTISKTKGRP----------KAPQLYTIPPPKE-QMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMN 328 (376)
T ss_pred ceEEEEcCCCCCC----------cCCeEEeeCCCHH-HhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceEC
Confidence 2 111111 222 5666654333222 3458899999999986433 35999999874321111 11123
Q ss_pred eCCC---EEEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 277 QDGS---TSVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 277 ~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
.+++ .+.|.|.....+|.|.|+|.|.|..-.
T Consensus 329 ~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 329 TNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred CCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCCC
Confidence 3444 345777777777899999999997643
No 381
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.54 E-value=8.5e-14 Score=117.12 Aligned_cols=181 Identities=9% Similarity=0.033 Sum_probs=103.5
Q ss_pred cceecCCcEEEEEEEEec--CCCCeeEEEeC--Ce---EEe-eC----------CCCceEEe------eceEEEeeecCC
Q psy3823 130 SVLNEGVDIYFDCHIQAN--PPYKKLIWTHN--GI---TIS-NN----------ASAGRIIT------NQTLVLQSVTRH 185 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~--p~~~~i~W~~~--~~---~l~-~~----------~~~~~~~~------~~~l~i~~~~~~ 185 (365)
..+.+|++++|.|.+.+. +... +.|++. +. .+. .. ...+.... +.+|.|.+++..
T Consensus 11 v~~~~G~~v~L~C~~~~~~~~~~~-v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (230)
T 1ypz_F 11 ISRPRDETAQISCKVFIESFRSVT-IHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEE 89 (230)
T ss_dssp EEEETTSCEEEEEEECCGGGGGCC-EEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGG
T ss_pred EEEeCCCcEEEEEEeeccccCccE-EEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChh
Confidence 357899999999999864 3444 999973 21 111 00 11122221 237999999999
Q ss_pred CCeEEEEEEEcC--CC-CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEe
Q psy3823 186 SGGLYACSAINS--QG-EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAF 261 (365)
Q Consensus 186 d~G~Y~C~~~~~--~~-~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~ 261 (365)
|+|.|.|.+.+. .. ......+.|.|..... -+....+|...........+..|+.++|.|.+.+. |.+..+.|++
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~-~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~~ 168 (230)
T 1ypz_F 90 DEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDK-RLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVYWKE 168 (230)
T ss_dssp GCSEEEEEECCTTTCCCCEECSCEEEEEECCCT-TCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEEEEEC
T ss_pred hCEEEEEEEECCCCCcccccCCCEEEEEecccc-cCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEEEEEc
Confidence 999999999875 11 1112345677751000 00000012211111111114568899999999986 6542499999
Q ss_pred -CCCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEE
Q psy3823 262 -NNSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTF 314 (365)
Q Consensus 262 -~~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 314 (365)
+|..............++. .+.|.|..... + |.|+|.|.|..+.......+
T Consensus 169 ~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~~~~~~~ 223 (230)
T 1ypz_F 169 KDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKGGADQAI 223 (230)
T ss_dssp TTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTTTSCEEE
T ss_pred cCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCCceeEee
Confidence 6653321111111123332 35688887765 4 99999999988765444333
No 382
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.54 E-value=6.3e-14 Score=119.71 Aligned_cols=173 Identities=13% Similarity=0.115 Sum_probs=102.7
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEe--CCeE---EeeCCC----------C-ceEEe-ece--EEEeeecCCCCeEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTH--NGIT---ISNNAS----------A-GRIIT-NQT--LVLQSVTRHSGGLY 190 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~--~~~~---l~~~~~----------~-~~~~~-~~~--l~i~~~~~~d~G~Y 190 (365)
..+.+|++++|.|.+.+.+.+. +.|++ .+.. +..... . +.... +.. |.|.+++..|+|.|
T Consensus 11 v~v~~G~~v~L~C~~~~~~~~~-v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~DsG~Y 89 (253)
T 3to4_D 11 RLVPRGQAVNLRCILKNSQYPW-MSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGRTL 89 (253)
T ss_dssp EEEESSCCEEEEEECSCTTCCC-EEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSCEEE
T ss_pred EEEeCCCcEEEEEEeCCCCcce-EEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhCeEE
Confidence 4678999999999988777766 99997 1211 110000 0 11111 111 99999999999999
Q ss_pred EEEEEcCCCC-----CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEee-eCCCceeEEEeCCC
Q psy3823 191 ACSAINSQGE-----GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDA-NPQAQYFTWAFNNS 264 (365)
Q Consensus 191 ~C~~~~~~~~-----~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~~~~~~W~~~~~ 264 (365)
.|.+.+..+. .......|.|... .....+|.+.........+..|+.++|.|.+.+ .|++..+.|+++|.
T Consensus 90 ~C~~~~~~~~~~~~~~~~~~t~l~V~~~----~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~ 165 (253)
T 3to4_D 90 YCTSSADHWTNTGQLYFGEGSKLTVLED----LKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 165 (253)
T ss_dssp EEEEECSCCSTTCCEEECCCEEEEEESC----STTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred EEEEecCCCCcccceEECCCEEEEEecC----CCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCE
Confidence 9999876431 1113345666510 000133443322211111345789999999998 55552499999876
Q ss_pred CCCCCCCcee--Ee-----eCCCE---EEEEEcCCCccc-CeEEEEEEEcCCcc
Q psy3823 265 DTAPRPLTSY--SI-----QDGST---SVARYTPTSELE-YGTLLCWARNEQGS 307 (365)
Q Consensus 265 ~~~~~~~~~~--~~-----~~~~~---s~l~i~~v~~~d-~G~Y~C~a~n~~g~ 307 (365)
.......... .. .++.. +.|.|.....+| .|.|+|.|.|..-.
T Consensus 166 ~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l~ 219 (253)
T 3to4_D 166 EVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (253)
T ss_dssp EECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred ECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCCC
Confidence 4322111000 00 23433 567888777777 77999999997543
No 383
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.54 E-value=1.2e-13 Score=116.74 Aligned_cols=172 Identities=15% Similarity=0.194 Sum_probs=101.6
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCC--eE---Ee---e-------CCCCceEE-----eeceEEEeeecCCCCeE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNG--IT---IS---N-------NASAGRII-----TNQTLVLQSVTRHSGGL 189 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~--~~---l~---~-------~~~~~~~~-----~~~~l~i~~~~~~d~G~ 189 (365)
..+.+|++++|.|.+.. +.+. +.|++++ .. +. . ....+... .+.+|.|.+++..|+|.
T Consensus 9 v~v~~G~~v~L~C~~~~-~~~~-v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~ 86 (238)
T 1bec_A 9 KVAVTGGKVTLSCQQTN-NHNN-MYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSV 86 (238)
T ss_dssp EEEETTCCEEEEEEESS-CCSE-EEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEE
T ss_pred eEEeCCCcEEEEEEeCC-CCce-EEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEE
Confidence 46789999999999853 4444 9999842 21 10 0 00112221 13589999999999999
Q ss_pred EEEEEEcCCCC----CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCCC
Q psy3823 190 YACSAINSQGE----GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNS 264 (365)
Q Consensus 190 Y~C~~~~~~~~----~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~ 264 (365)
|.|.+.+..+. .......|.|.... ....+|.+.........+..|+.++|.|.+.+. |.+..+.|+++|.
T Consensus 87 Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~----~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~ 162 (238)
T 1bec_A 87 YFCASGGGRGSYAEQFFGPGTRLTVLEDL----RQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGK 162 (238)
T ss_dssp EEEEEESCTTCGGGCEECCCEEEEEESCG----GGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTE
T ss_pred EEEEEecCCCCccccccCCCEEEEEeccC----CCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCE
Confidence 99999987421 11233567776100 001245544322222225679999999999986 6552499999886
Q ss_pred CCCCCCC---ceeEeeCCCE---EEEEEcCCCccc-CeEEEEEEEcCCcc
Q psy3823 265 DTAPRPL---TSYSIQDGST---SVARYTPTSELE-YGTLLCWARNEQGS 307 (365)
Q Consensus 265 ~~~~~~~---~~~~~~~~~~---s~l~i~~v~~~d-~G~Y~C~a~n~~g~ 307 (365)
....... ......++.. +.|.|......| .|.|+|.|.|....
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 212 (238)
T 1bec_A 163 EVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLS 212 (238)
T ss_dssp EECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCC
T ss_pred ECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCC
Confidence 4332211 0111234432 334454444434 67899999997543
No 384
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.54 E-value=4.5e-14 Score=120.21 Aligned_cols=171 Identities=13% Similarity=0.121 Sum_probs=104.1
Q ss_pred ceEEEEecCCcEEEEEEeCC--CCCcceEEEEeCCCcC----C-----CC---------CCceeE--ecCCeEEEEEEcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDA--NPQAQYFTWAFNNSGT----A-----PR---------PLTSYS--IQDGSTSVARYTP 76 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~--~p~~~~v~W~~~~~~~----l-----~~---------~~~~~~--~~~~~~~~l~i~~ 76 (365)
+....+.+|++++|.|...+ .+.. .+.|||..... + .. ..+... ........|.|.+
T Consensus 6 ~~~v~v~~G~~v~L~C~~s~~~~~~~-~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 84 (248)
T 3u2s_H 6 SGGGVVQPGSSLRLSCAASGFDFSRQ-GMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNS 84 (248)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred CCCEEEeCCCCEEEEEEeccccCCcc-EEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECC
Confidence 45577899999999999543 2344 89999853210 0 00 011111 1123455799999
Q ss_pred CCCCCCeEEEEEEEeCC----------------------CCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceec
Q psy3823 77 TSELEYGTLLCWARNEQ----------------------GNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNE 134 (365)
Q Consensus 77 ~~~~d~G~Y~C~a~~~~----------------------~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 134 (365)
++.+|+|.|.|.+.+.. ........|+|.. .+..+|.+...... ..+..
T Consensus 85 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~-----~~~~~P~v~~~~~~----~~~~~ 155 (248)
T 3u2s_H 85 LRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSS-----ASTKGPSVFPLAPS----SKSTS 155 (248)
T ss_dssp CCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECS-----CCCBCCEEEEECCC---------
T ss_pred CCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcc-----cCCCCCEEEEeCCC----ccccC
Confidence 99999999999998642 1111446677731 11245665543322 23457
Q ss_pred CCcEEEEEEEEe-cCCCCeeEEEeCCeEEeeC------CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 135 GVDIYFDCHIQA-NPPYKKLIWTHNGITISNN------ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 135 g~~v~l~C~~~~-~p~~~~i~W~~~~~~l~~~------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
|+.++|.|.+.+ .|.+..+.|++++..+... ...+.....+.|.|.....++ |.|+|.+.|..+.
T Consensus 156 g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~ 227 (248)
T 3u2s_H 156 GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 227 (248)
T ss_dssp -CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGT
T ss_pred CCcEEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCC
Confidence 999999999997 4545568999988532110 111222224568888888888 9999999998653
No 385
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.53 E-value=1.1e-13 Score=114.48 Aligned_cols=163 Identities=15% Similarity=0.113 Sum_probs=101.5
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcC-CC----------CCCceeEecC---CeEEEEEEccCCCCCCeE
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGT-AP----------RPLTSYSIQD---GSTSVARYTPTSELEYGT 84 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~-l~----------~~~~~~~~~~---~~~~~l~i~~~~~~d~G~ 84 (365)
+..+.+.+|++++|.|...+.+ + .+.|+|..... +. ...+.....+ .....|.|.+++.+|+|.
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~-~-~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~ 85 (207)
T 1ypz_E 8 PSALSLHEGTDSALRCNFTTTM-R-SVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGT 85 (207)
T ss_dssp CSEEEEETTCCEEEEEEESSCC-S-EEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEE
T ss_pred CCeEEEccCCcEEEEEEEeCCC-e-EEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEE
Confidence 4567889999999999976543 5 79999964310 10 0111112222 345689999999999999
Q ss_pred EEEEEEeCCC---------CC--cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCe
Q psy3823 85 LLCWARNEQG---------NQ--RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKK 152 (365)
Q Consensus 85 Y~C~a~~~~~---------~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~ 152 (365)
|.|.+.+..+ .. .....|+|..... +..+|.+.+. . ..++|.|.+.+. |.+..
T Consensus 86 Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~---~~~~P~v~~~-----------~-~~~~l~C~~~g~~P~~~~ 150 (207)
T 1ypz_E 86 YFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQ---PPAKPSVFIM-----------K-NGTNVACLVKDFYPKEVT 150 (207)
T ss_dssp EEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCC---CCCCCEEEEE-----------E-ETTEEEEEEEEESSSCCE
T ss_pred EEEEEecCCcccccccccceeeecCccEEEEccCCC---CCCCCeEEEe-----------C-CCCeEEEEEeeEeCCCeE
Confidence 9999987642 11 1346788842100 0124443321 1 136999999975 44345
Q ss_pred eEEEeCCeEEeeCCCCceEEeeceEEEeeecC-CCCeEEEEEEEcCCC
Q psy3823 153 LIWTHNGITISNNASAGRIITNQTLVLQSVTR-HSGGLYACSAINSQG 199 (365)
Q Consensus 153 i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~~ 199 (365)
+.|+++ ..+...........++.+.+..... ++.|.|+|.+.|..+
T Consensus 151 v~W~~~-~~l~~~~~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~ 197 (207)
T 1ypz_E 151 ISLRSS-KKIVEFDPAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSE 197 (207)
T ss_dssp EEEECS-SEEEECCCEEEECTTSSEEEEECEEESSTTTCEEEEEETTE
T ss_pred EEEecC-CcccCCccceEEcCCCcEEEEEeecccCCCcEEEEEEECCc
Confidence 999999 7775432211112345566655444 678999999998765
No 386
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.53 E-value=2.6e-15 Score=124.96 Aligned_cols=179 Identities=13% Similarity=0.132 Sum_probs=106.1
Q ss_pred CCeEEEEcCCccCccceecCCcEEEEEEEEecCC--CCeeEEEeCCeEEeeC-------CCCceEEeeceEEEeeecCCC
Q psy3823 116 KPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPP--YKKLIWTHNGITISNN-------ASAGRIITNQTLVLQSVTRHS 186 (365)
Q Consensus 116 ~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~--~~~i~W~~~~~~l~~~-------~~~~~~~~~~~l~i~~~~~~d 186 (365)
+|.+.+... ....+.+|++++|.|.+.+.++ +..|.| + +..+... ...+.......|.|.++...|
T Consensus 3 ~p~v~~~~P---~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D 77 (214)
T 1ow0_A 3 HPRLSLHRP---ALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNH 77 (214)
T ss_dssp CCCCEEECC---CHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHH
T ss_pred CCEEEEECc---ChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCC
Confidence 444444432 2245789999999999998754 234999 4 3333210 000111134568888888899
Q ss_pred CeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCC-CceeEEEeCCCC
Q psy3823 187 GGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ-AQYFTWAFNNSD 265 (365)
Q Consensus 187 ~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~~W~~~~~~ 265 (365)
+|.|+|.+.|..+... ....+.+. ....+|.+.........+..|+.++|.|.+.|.++ +..+.|+++|..
T Consensus 78 ~g~Y~C~~~~~~~~~~-~~~~i~~~-------~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~ 149 (214)
T 1ow0_A 78 GKTFTCTAAYPESKTP-LTATLSKS-------GNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQE 149 (214)
T ss_dssp TCEEEEEECCSSCSSC-EEEEEECC-------SSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEE
T ss_pred CCeEEEEEecCCCCCc-eeEeeccC-------CCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEE
Confidence 9999999998876432 12223211 11156665432222122567899999999998644 324999999864
Q ss_pred CCCCC---CceeEe---eCCCE---EEEEEcCCCcccCeEEEEEEEcCCcc
Q psy3823 266 TAPRP---LTSYSI---QDGST---SVARYTPTSELEYGTLLCWARNEQGS 307 (365)
Q Consensus 266 ~~~~~---~~~~~~---~~~~~---s~l~i~~v~~~d~G~Y~C~a~n~~g~ 307 (365)
..... ...... .+++. +.|.+.....++.|.|+|.|.|....
T Consensus 150 l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 150 LPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp CCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred CCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 33221 011223 44543 33455554445689999999998654
No 387
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.53 E-value=3.2e-14 Score=119.89 Aligned_cols=178 Identities=10% Similarity=0.164 Sum_probs=103.6
Q ss_pred cceecCCcEEEEEEEEecC--CCCee--EEEeC--Ce---EEe----eCC----------CCceEEe------eceEEEe
Q psy3823 130 SVLNEGVDIYFDCHIQANP--PYKKL--IWTHN--GI---TIS----NNA----------SAGRIIT------NQTLVLQ 180 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p--~~~~i--~W~~~--~~---~l~----~~~----------~~~~~~~------~~~l~i~ 180 (365)
..+.+|++|+|.|.+.+.+ ... + .|++. +. .+. ... ..+.... +.+|.|.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~-i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 88 (232)
T 3qhz_H 10 ALVKPTQTLTLTCSFSGFSLSTSG-MSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMT 88 (232)
T ss_dssp SEECTTSCEEEEEEEESCGGGCTT-CEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EEECCCCcEEEEEEEeCcccccce-eEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEEC
Confidence 3578999999999997632 233 6 99972 11 110 000 0122222 2369999
Q ss_pred eecCCCCeEEEEEEEcCCC-------CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCC
Q psy3823 181 SVTRHSGGLYACSAINSQG-------EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ 253 (365)
Q Consensus 181 ~~~~~d~G~Y~C~~~~~~~-------~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 253 (365)
+++..|+|.|.|.+.+..+ ........|.|.. .....|.+....... .+..|+.++|.|.+.+.++
T Consensus 89 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~------~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~~~~P 161 (232)
T 3qhz_H 89 NMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSS------ASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFP 161 (232)
T ss_dssp SCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECS------SCCBCCEEEEECC--------CEEEEEEEEEEEBS
T ss_pred cCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEec------CCCCCCEEEEecccc-cccCCCcEEEEEEEeeEeC
Confidence 9999999999999997631 1122334566641 001345444222111 1557999999999998654
Q ss_pred Cc-eeEEEeCCCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEE
Q psy3823 254 AQ-YFTWAFNNSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHV 316 (365)
Q Consensus 254 ~~-~~~W~~~~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 316 (365)
+. .+.|++++..............++. .+.|.|.+....| |.|+|.|.|..+.......|.+
T Consensus 162 ~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 162 EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp SCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred CCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 33 4789998753211111111122332 2468898888888 9999999999877655555443
No 388
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.52 E-value=4.6e-14 Score=102.16 Aligned_cols=86 Identities=12% Similarity=0.127 Sum_probs=71.9
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCc--eeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLT--SYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~--~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
..+....+.+|+.+.|.|.+.+.|.+ .++|++++.. +..... ......+...+|.|.+++.+|+|.|+|.|.|..|
T Consensus 10 ~~p~~~~v~~G~~~~l~C~~~g~P~p-~v~W~k~g~~-i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G 87 (100)
T 3knb_A 10 ALPSDISIDEGKVLTVACAFTGEPTP-EVTWSCGGRK-IHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFG 87 (100)
T ss_dssp CCCSEEEEETTSEEEEEEEEEEESCC-EEEEEETTEE-CCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred eCCCcEEEeCCCeEEEEEEEEEecCC-EEEEEECceE-eeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCC
Confidence 44567788999999999998899999 9999999988 654432 2333455567899999999999999999999999
Q ss_pred CCcccEEEEE
Q psy3823 95 NQRTPCTFHV 104 (365)
Q Consensus 95 ~~~~~~~l~V 104 (365)
.....+.|.|
T Consensus 88 ~~~~~~~l~V 97 (100)
T 3knb_A 88 SDSATVNIHI 97 (100)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 8888888887
No 389
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.52 E-value=3.1e-13 Score=108.39 Aligned_cols=157 Identities=14% Similarity=0.238 Sum_probs=104.9
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeE-ecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYS-IQDGSTSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
+....|.+|+++.|.|.+.. +.+..+.|... +.. ... ........|.|.+++. | |.|.|.+........
T Consensus 6 P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~----l~~---~~~~~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~ 75 (185)
T 1iam_A 6 PSKVILPRGGSVLVTCSTSC-DQPKLLGIETP----LPK---KELLLPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQST 75 (185)
T ss_dssp SSEEEEETTEEEEEEEEECS-SSCSEEEEECS----SCE---EEECSSSSSEEEEEEEEECS-C-BCCEEEEECSSCEEE
T ss_pred CCCcEEeCCCCEEEEEEccC-CCCccceEEee----CCC---ccEeccCCceeEEEEEecCc-C-CEEEEEEECCCCceE
Confidence 34466899999999999754 55525777532 111 011 1122334689999984 4 899999865544445
Q ss_pred ccEEEEEEeccccCCCCCCCe-EEEEcCCccCccceecCCcEEEEEEEEecCCCC--eeEEEeCCeEEeeCCCCceEEee
Q psy3823 98 TPCTFHVVKAGECEHPVDKPS-VQIKLGRNLNASVLNEGVDIYFDCHIQANPPYK--KLIWTHNGITISNNASAGRIITN 174 (365)
Q Consensus 98 ~~~~l~V~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~--~i~W~~~~~~l~~~~~~~~~~~~ 174 (365)
..+.|+| +.+|. +.+.+.+ ..+.+|+.++|.|.+.+..++. .|.||+++..+...... ....+
T Consensus 76 ~~~~l~V---------~~~P~~v~i~~~~----~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~-~~~~~ 141 (185)
T 1iam_A 76 AKTFLTV---------YWTPERVELAPLP----SWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAV-GEPAE 141 (185)
T ss_dssp EECEEEE---------EBCCSEEEECCCC----SEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECC-TTTEE
T ss_pred EEEEEEE---------eCCCCCCEEccCC----ccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCC-Ccccc
Confidence 8888998 55554 4454422 2488999999999999855543 37999999988642211 01123
Q ss_pred ceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 175 QTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 175 ~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
.+|.+.....+|...|+|+|.+..+
T Consensus 142 ~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 142 VTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp EEEEEECCSSCSSCEEEEEEEEECG
T ss_pred EEEEEeceeccCCCeEEEEEEecCc
Confidence 3577776666777799999998876
No 390
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.52 E-value=1.5e-13 Score=115.60 Aligned_cols=168 Identities=14% Similarity=0.150 Sum_probs=104.7
Q ss_pred eEEEEecCCcEEEEEEeCC--CCCcceEEEEeCCCc----CC---CC-----------CCceeE--ecCCeEEEEEEccC
Q psy3823 20 RIYGALRNEQVLVSCTVDA--NPQAQYFTWAFNNSG----TA---PR-----------PLTSYS--IQDGSTSVARYTPT 77 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~--~p~~~~v~W~~~~~~----~l---~~-----------~~~~~~--~~~~~~~~l~i~~~ 77 (365)
....+.+|+.++|.|...+ .+.. .+.|||.... .+ .. ..+... ........|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (230)
T 3n9g_H 8 GAEVRKPGASTKVSCKASGYTFTHY-YMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSL 86 (230)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEcCCCCEEEEEEeecceecCc-EEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 3467899999999999543 2334 8999985321 00 00 011111 12234557999999
Q ss_pred CCCCCeEEEEEEEeCCC-----CC---cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-C
Q psy3823 78 SELEYGTLLCWARNEQG-----NQ---RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-P 148 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~-----~~---~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p 148 (365)
+.+|+|.|.|.+.+..+ .. .....|.|.. .+..+|.+...... ..+.+|+.++|.|.+.+. |
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~P~v~~~~~~----~~~~~g~~v~L~C~~~~~~P 157 (230)
T 3n9g_H 87 RSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSS-----ASTKGPSVFPLAPS----SKSTSGGTAALGCLVKDYFP 157 (230)
T ss_dssp CGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECS-----SCCBCCEEEEECCC----CCCCTTCEEEEEEEEEEEBS
T ss_pred ChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEe-----cCCCCCEEEecCCC----ccccCCCCEEEEEEEEeEEC
Confidence 99999999999987541 11 1445677721 11235655533321 235689999999999974 4
Q ss_pred CCCeeEEEeCCeEEeeC--------CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 149 PYKKLIWTHNGITISNN--------ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 149 ~~~~i~W~~~~~~l~~~--------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.+..+.| ++..+... ...+.....+.|.|.....+| |.|+|.+.|..+.
T Consensus 158 ~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~ 214 (230)
T 3n9g_H 158 EPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 214 (230)
T ss_dssp SCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGT
T ss_pred CCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCC
Confidence 3556899 55443210 011122223578899888889 9999999998754
No 391
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.52 E-value=5.2e-15 Score=128.16 Aligned_cols=187 Identities=11% Similarity=0.106 Sum_probs=65.8
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEeC-CCCCcc-eEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCC
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVD-ANPQAQ-YFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELE 81 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~-~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d 81 (365)
+.+.+.+.|...........+.+|+.++|.|.+. +.|.+. .++|+|++.. +..... ........|.+.....+|
T Consensus 78 v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~-l~~~~~---~~~~~~~~l~~~~~~~D~ 153 (291)
T 1mq8_A 78 TFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKE-LKREPA---VGEPAEVTTTVLVRRDHH 153 (291)
T ss_dssp CEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSE-EEEEEC---CBTTEEEEEECCCSSSCS
T ss_pred EEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEE-eecccC---CCCCceEEEEeeeeeccC
Confidence 3455666676655544444478999999999944 455542 5899999987 543221 112233578888888888
Q ss_pred CeEEEEEEEeCCCC--------CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCC--C
Q psy3823 82 YGTLLCWARNEQGN--------QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPY--K 151 (365)
Q Consensus 82 ~G~Y~C~a~~~~~~--------~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~--~ 151 (365)
.+.|+|.|.+..+. ......|.| +++|........ + ..+.+|+.++|.|.+.|.+++ .
T Consensus 154 g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V---------~~~P~~~~~~~~--p-~~l~eG~~v~l~C~~~g~~P~~~~ 221 (291)
T 1mq8_A 154 GANFSCRTELDLRPQGLELFENTSAPYQLQT---------FVLPATPPQLVS--P-RVLEVDTQGTVVCSLDGLFPVSEA 221 (291)
T ss_dssp SCEEEEEEEEECGGGTSCEEEECCCCEECBC-------------------------------------------------
T ss_pred CceEEEEEEecCCccCCccccccccceEEEE---------EecCCCCceecC--C-cCccCCCeEEEEEEcCCCCCCccc
Confidence 89999999987552 236677777 566532222111 1 257799999999999997665 2
Q ss_pred eeEEEeCCeEEeeCCCCceEEeeceEEEeee---cC--CCCeEEEEEEEcCCCCCCcccEEEEEe
Q psy3823 152 KLIWTHNGITISNNASAGRIITNQTLVLQSV---TR--HSGGLYACSAINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 152 ~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~---~~--~d~G~Y~C~~~~~~~~~~s~~~~l~v~ 211 (365)
.+.|+++|..+.... ......+.+... ++ ++++.|+|.+.+...... ....|.|.
T Consensus 222 ~v~w~~~g~~l~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~-~~~~l~v~ 281 (291)
T 1mq8_A 222 QVHLALGDQRLNPTV----TYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQE-TLQTVTIY 281 (291)
T ss_dssp -----------------------------------------------------------------
T ss_pred EEEEEECCEecCcee----eecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceE-EEEEEEEE
Confidence 488999998886421 112223333322 23 345777888886443333 44566665
No 392
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.51 E-value=2.1e-13 Score=101.30 Aligned_cols=89 Identities=12% Similarity=0.035 Sum_probs=73.8
Q ss_pred eeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 15 KQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 15 ~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
+...+....+.+|+.+.|.|.+.+.|.+ .++|+|++.. +................|.|.+++.+|+|.|+|.|.|..|
T Consensus 10 i~~~~~~~~v~~G~~v~l~C~~~g~p~p-~i~W~k~~~~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g 87 (114)
T 2cqv_A 10 IIQFPEDQKVRAGESVELFGKVTGTQPI-TCTWMKFRKQ-IQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLG 87 (114)
T ss_dssp ESCCCCSEEEETTCCEEEEEEEESSSSC-EEEEEESSSB-CCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSC
T ss_pred EEeCCCCeEEeCCCeEEEEEEEEcCCCC-EEEEEECCEE-CcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCC
Confidence 3345566778999999999998889999 9999999988 7655444444444466899999999999999999999999
Q ss_pred CCcccEEEEEE
Q psy3823 95 NQRTPCTFHVV 105 (365)
Q Consensus 95 ~~~~~~~l~V~ 105 (365)
.....+.|.|.
T Consensus 88 ~~~~~~~l~V~ 98 (114)
T 2cqv_A 88 SRQAQVNLTVV 98 (114)
T ss_dssp EEECCEEEEEE
T ss_pred cEEEEEEEEEE
Confidence 88888999983
No 393
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.51 E-value=9.1e-14 Score=117.66 Aligned_cols=178 Identities=13% Similarity=0.179 Sum_probs=105.4
Q ss_pred cceecCCcEEEEEEEEecCC---CCeeEEEeC--Ce---EE-eeC----------------CCCceEEe------eceEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPP---YKKLIWTHN--GI---TI-SNN----------------ASAGRIIT------NQTLV 178 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~---~~~i~W~~~--~~---~l-~~~----------------~~~~~~~~------~~~l~ 178 (365)
..+.+|++|+|.|.+.+.+. ...+.|++. +. .+ ... ...+.... ..+|.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 89 (239)
T 3tv3_H 10 TLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLK 89 (239)
T ss_dssp SEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEEE
T ss_pred EEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEEE
Confidence 46789999999999987543 335999972 21 11 010 01112221 23599
Q ss_pred EeeecCCCCeEEEEEEEcCCCC------------CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEE
Q psy3823 179 LQSVTRHSGGLYACSAINSQGE------------GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSC 246 (365)
Q Consensus 179 i~~~~~~d~G~Y~C~~~~~~~~------------~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C 246 (365)
|.+++..|+|.|.|.+.+..+. .......|.|.. .....|.+........ +..|+.++|.|
T Consensus 90 I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~------~~~~~P~v~~~~~~~~-~~~g~~v~l~C 162 (239)
T 3tv3_H 90 LNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSS------ASTKGPSVFPLAPSSK-STSGGTAALGC 162 (239)
T ss_dssp ECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECC------CCCBCCEEEEECCCCC-C--TTEEEEEE
T ss_pred ECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeecc------CCCcCCEEEEECCChh-hccCCcEEEEE
Confidence 9999999999999999865320 111233555541 0013444442222211 45799999999
Q ss_pred EEeee-CCCceeEEEeCCCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEEE
Q psy3823 247 TVDAN-PQAQYFTWAFNNSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFH 315 (365)
Q Consensus 247 ~~~~~-p~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 315 (365)
.+.+. |.+..+.|++++..............++. .+.|.|.....+| |.|+|.|.|..+.......|.
T Consensus 163 ~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 234 (239)
T 3tv3_H 163 LVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 234 (239)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEec
Confidence 99885 43435889998753211111111122333 2468888888888 999999999887665444443
No 394
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.50 E-value=2.9e-13 Score=113.85 Aligned_cols=178 Identities=13% Similarity=0.140 Sum_probs=105.8
Q ss_pred cceecCCcEEEEEEEEec-CCCCeeEEEeC--Ce---EE-eeCC-----------CCceEEe------eceEEEeeecCC
Q psy3823 130 SVLNEGVDIYFDCHIQAN-PPYKKLIWTHN--GI---TI-SNNA-----------SAGRIIT------NQTLVLQSVTRH 185 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~--~~---~l-~~~~-----------~~~~~~~------~~~l~i~~~~~~ 185 (365)
..+.+|++|+|.|.+.+. .....+.||+. +. .+ .... ..+.... ..+|.|.+++..
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (230)
T 3n9g_H 10 EVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRSE 89 (230)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCChh
Confidence 357899999999999752 12233999972 21 11 0000 1122221 224999999999
Q ss_pred CCeEEEEEEEcCCC-----C--CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCC-Ccee
Q psy3823 186 SGGLYACSAINSQG-----E--GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ-AQYF 257 (365)
Q Consensus 186 d~G~Y~C~~~~~~~-----~--~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~ 257 (365)
|+|.|.|.+.+..+ . .......|.|.. ....+|.+........ +..|+.++|.|.+.+.++ +..+
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~------~~~~~P~v~~~~~~~~-~~~g~~v~L~C~~~~~~P~~~~v 162 (230)
T 3n9g_H 90 DTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSS------ASTKGPSVFPLAPSSK-STSGGTAALGCLVKDYFPEPVTV 162 (230)
T ss_dssp GCEEEEEEEECCCSSSTTCCEEEECCCEEEEECS------SCCBCCEEEEECCCCC-CCTTCEEEEEEEEEEEBSSCCEE
T ss_pred hCEEEEEEEccCCCCcccccccccCCCEEEEEEe------cCCCCCEEEecCCCcc-ccCCCCEEEEEEEEeEECCCEEE
Confidence 99999999987541 1 112334566641 0013444432121111 468999999999988543 3358
Q ss_pred EEEeCCCCCCCCCCc--eeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 258 TWAFNNSDTAPRPLT--SYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 258 ~W~~~~~~~~~~~~~--~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
.| ++......... .....++. .+.|.|.....+| |.|+|.|.|..+.......|.|.
T Consensus 163 ~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 163 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp EE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred EE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 89 54433211111 11122332 3478999999999 99999999988776555555443
No 395
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.49 E-value=2.9e-13 Score=97.73 Aligned_cols=94 Identities=11% Similarity=0.080 Sum_probs=72.5
Q ss_pred CCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEE
Q psy3823 223 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR 302 (365)
Q Consensus 223 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~ 302 (365)
+|.+...... ..+..|+.+.|.|.+.|.|.+. +.|+++|...............+..+.|.|.+++.+|+|.|+|.|.
T Consensus 5 ~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~-v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (99)
T 1g1c_A 5 APKIFERIQS-QTVGQGSDAHFRVRVVGKPDPE-CEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAI 82 (99)
T ss_dssp EEEEEECCCC-EEEETTSCEEEEEEEEEESCCE-EEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCceEecCcc-eEEcCCCcEEEEEEEEEeCCCE-EEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEE
Confidence 4445443333 3388999999999999999998 9999998754433222222334556789999999999999999999
Q ss_pred cCCccceecEEEEEEc
Q psy3823 303 NEQGSQRTPCTFHVVK 318 (365)
Q Consensus 303 n~~g~~~~~~~l~v~~ 318 (365)
|..|.....+.|.|..
T Consensus 83 N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 83 NIAGETSSHAFLLVQA 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCcEEEEEEEEEec
Confidence 9999999888888764
No 396
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.49 E-value=2.2e-13 Score=98.40 Aligned_cols=94 Identities=20% Similarity=0.272 Sum_probs=73.8
Q ss_pred CCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEE
Q psy3823 223 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR 302 (365)
Q Consensus 223 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~ 302 (365)
+|.+...+... .+..|+.+.|.|.+.+.|.+. +.|++++..............++..+.|.|.+++.+|+|.|+|.|.
T Consensus 5 ~P~~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~-v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (99)
T 1u2h_A 5 PPTFKVSLMDQ-SVREGQDVIMSIRVQGEPKPV-VSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAV 82 (99)
T ss_dssp EEEEEECCCCE-EEETTCCEEEEEEEEEESCCE-EEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEEcCCce-EecCCCEEEEEEEEEEcCCCE-EEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEE
Confidence 44454433333 388999999999999999998 9999998755443333444455666789999999999999999999
Q ss_pred cCCccceecEEEEEEc
Q psy3823 303 NEQGSQRTPCTFHVVK 318 (365)
Q Consensus 303 n~~g~~~~~~~l~v~~ 318 (365)
|..|..+..+.|.|..
T Consensus 83 N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 83 NEYGARQCEARLEVRG 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCceeEEEEEEEEC
Confidence 9999998888888763
No 397
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.48 E-value=2.4e-13 Score=98.39 Aligned_cols=96 Identities=14% Similarity=0.229 Sum_probs=73.4
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+...+.. ..+..|+.+.|.|.+.+.|.+. +.|+++|..................+.|.|.+++.+|+|.|+|.|
T Consensus 4 ~~P~~~~~p~~-~~~~~G~~~~l~C~~~g~p~p~-v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 81 (100)
T 2kdg_A 4 GPPRFIQVPEN-MSIDEGRFCRMDFKVSGLPAPD-VSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVA 81 (100)
T ss_dssp EEEECCCCCCC-EEEETTCCEEEEEECEEESCCE-EEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEEeCCCC-EEecCCCEEEEEEEEEeeCCCE-EEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEE
Confidence 34444443333 3388999999999999999998 999998865443332223334445567999999999999999999
Q ss_pred EcCCccceecEEEEEEcC
Q psy3823 302 RNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~~~ 319 (365)
.|..|..+.++.|.|...
T Consensus 82 ~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 82 KNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp EETTEEEEEEEEEEEECC
T ss_pred EcCCCeEEEEEEEEEEec
Confidence 999999999999988754
No 398
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.48 E-value=3e-13 Score=96.50 Aligned_cols=90 Identities=14% Similarity=0.152 Sum_probs=69.5
Q ss_pred CCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCC--CCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEE
Q psy3823 223 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNN--SDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCW 300 (365)
Q Consensus 223 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~--~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~ 300 (365)
+|.+..... ...+..|+.+.|.|.+.|.|.|. +.|++++ ...... .........+.|.|.+++.+|+|.|+|.
T Consensus 2 ~P~i~~~~~-~~~v~~G~~~~l~C~~~g~P~p~-i~W~k~~~~~~~~~~---~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 76 (93)
T 1wit_A 2 KPKILTASR-KIKIKAGFTHNLEVDFIGAPDPT-ATWTVGDSGAALAPE---LLVDAKSSTTSIFFPSAKRADSGNYKLK 76 (93)
T ss_dssp CCEECCCCC-EEEECTTBCCEEEEEEECCSSCE-EEEECSTTTCBCSTT---SEEEEETTEEEEECTTBCGGGCEEEEEE
T ss_pred CCeEEcCCC-ceEEeCCCEEEEEEEEEEcCCCE-EEEEECCCCcccCCc---EEEEecCCEEEEEECCCChhcCEEEEEE
Confidence 355543333 34488999999999999999998 9999998 433221 2223334567899999999999999999
Q ss_pred EEcCCccceecEEEEEE
Q psy3823 301 ARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 301 a~n~~g~~~~~~~l~v~ 317 (365)
|.|..|..+..+.|.|+
T Consensus 77 a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 77 VKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp EEETTEEEEEEEEEEEC
T ss_pred EEcCCCeEEEEEEEEEC
Confidence 99999999888888763
No 399
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.48 E-value=8.5e-13 Score=97.98 Aligned_cols=95 Identities=15% Similarity=0.096 Sum_probs=76.0
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+...+.. ..+..|+.+.|.|.+.+.|.+. +.|++++..... ..+..+........|.|.+++.+|+|.|+|.|
T Consensus 6 ~pp~i~~~~~~-~~v~~G~~v~l~C~~~g~p~p~-i~W~k~~~~~~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (114)
T 2cqv_A 6 SGPQIIQFPED-QKVRAGESVELFGKVTGTQPIT-CTWMKFRKQIQE-SEHMKVENSENGSKLTILAARQEHCGCYTLLV 82 (114)
T ss_dssp CCCEESCCCCS-EEEETTCCEEEEEEEESSSSCE-EEEEESSSBCCC-SSSEEEEECSSEEEEEETTCCTTTCEEEEEEE
T ss_pred CCCEEEeCCCC-eEEeCCCeEEEEEEEEcCCCCE-EEEEECCEECcC-CCCEEEEEcCCEEEEEECCCChhcCEEEEEEE
Confidence 45666544433 3489999999999999999998 999999875432 33445555555778999999999999999999
Q ss_pred EcCCccceecEEEEEEcC
Q psy3823 302 RNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~~~ 319 (365)
.|..|..+..+.|.|...
T Consensus 83 ~N~~g~~~~~~~l~V~~~ 100 (114)
T 2cqv_A 83 ENKLGSRQAQVNLTVVDK 100 (114)
T ss_dssp ECSSCEEECCEEEEEECS
T ss_pred EECCCcEEEEEEEEEECC
Confidence 999999999999998744
No 400
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.48 E-value=1.3e-13 Score=118.51 Aligned_cols=168 Identities=13% Similarity=0.117 Sum_probs=99.3
Q ss_pred eEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCCcC-CC------C----------CCceeE--ecCCeEEEEEEccCC
Q psy3823 20 RIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNSGT-AP------R----------PLTSYS--IQDGSTSVARYTPTS 78 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~~~-l~------~----------~~~~~~--~~~~~~~~l~i~~~~ 78 (365)
....+.+|++++|.|...+.+ .. .+.|||..... .. . ..+... ........|.|.+++
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 86 (263)
T 3iu4_H 8 GPGLVAPSQSLSITCTVSGFSLSRY-SVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQ 86 (263)
T ss_dssp CCSEECTTSCEEEEEEEESSCGGGS-CEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCC
T ss_pred CCEEEcCCCCEEEEEEeccccCCce-EEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCC
Confidence 346689999999999964322 34 89999853210 00 0 011111 122344579999999
Q ss_pred CCCCeEEEEEEEeCCC------C--CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CC
Q psy3823 79 ELEYGTLLCWARNEQG------N--QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PP 149 (365)
Q Consensus 79 ~~d~G~Y~C~a~~~~~------~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~ 149 (365)
.+|+|.|.|.+.+... . ......|.|.. .+..+|.+...... ..+.+|+.++|.|.+.+. |.
T Consensus 87 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~-----~~~~~P~v~~~~~~----~~~~~g~~~~L~C~~~~~~P~ 157 (263)
T 3iu4_H 87 TDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSA-----ASTKGPSVFPLAPS----SKGSTSGTAALGCLVKDYFPE 157 (263)
T ss_dssp GGGCEEEEEEEEECC---CEEEEEEECCCEEEEECS-----SCCBCCEEEEECCC----CCC----EEEEEEEEEEEBSS
T ss_pred HHHCEEEEEEEEeCCCCccccccceeCCceEEEEec-----ccCCCCEEEEccCc----cccccCCcEEEEEEEEeEeCC
Confidence 9999999999987531 0 11345677621 11345665533321 234589999999999974 43
Q ss_pred CCeeEEEeCCeEEee--------CCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 150 YKKLIWTHNGITISN--------NASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 150 ~~~i~W~~~~~~l~~--------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
+..+.| ++..+.. ....+.....+.|.|.....+| |.|+|.+.|..+.
T Consensus 158 ~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~ 213 (263)
T 3iu4_H 158 PVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 213 (263)
T ss_dssp CCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGT
T ss_pred ceEEEE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCC
Confidence 456999 4433211 0011122223468888887788 9999999998763
No 401
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.47 E-value=4.8e-13 Score=97.32 Aligned_cols=95 Identities=13% Similarity=0.110 Sum_probs=75.8
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+...... ..+..|+.+.|.|.+.+.|.|. +.|++++..... ..+..+..++....|.|.+++.+|+|.|+|.|
T Consensus 7 ~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~-i~W~k~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 83 (103)
T 3qp3_A 7 HAPRITLRMRS-HRVPCGQNTRFILNVQSKPTAE-VKWYHNGVELQE-SSKIHYTNTSGVLTLEILDCHTDDSGTYRAVC 83 (103)
T ss_dssp EEEEEEECCCC-EEEETTCCEEEEEEEEEESCCE-EEEEETTEECCC-CSSEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEeCCcc-eEEeCCCeEEEEEEEEecCCCE-EEEEECCEECCC-CCCEEEEECCCEEEEEEcCCCcccCEEEEEEE
Confidence 45555544433 3388999999999999999998 999999874433 34455555666778999999999999999999
Q ss_pred EcCCccceecEEEEEEcC
Q psy3823 302 RNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~~~ 319 (365)
.|..|..+..+.|.|...
T Consensus 84 ~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 84 TNYKGEASDYATLDVTGG 101 (103)
T ss_dssp EETTEEEEEEEEEEEECC
T ss_pred EeCCCcEEEEEEEEEECC
Confidence 999999999989888754
No 402
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.47 E-value=2.6e-13 Score=115.43 Aligned_cols=177 Identities=12% Similarity=0.182 Sum_probs=101.7
Q ss_pred cceecCCcEEEEEEEEec-CCCCeeEEEeC--CeEE--e--eC-----------CCCceEEe------eceEEEeeecCC
Q psy3823 130 SVLNEGVDIYFDCHIQAN-PPYKKLIWTHN--GITI--S--NN-----------ASAGRIIT------NQTLVLQSVTRH 185 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~-p~~~~i~W~~~--~~~l--~--~~-----------~~~~~~~~------~~~l~i~~~~~~ 185 (365)
..+.+|++|+|.|.+.+. .....+.|++. +..+ . .. ...+.... ..+|.|.+++.+
T Consensus 9 v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (248)
T 3u2s_H 9 GVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRVE 88 (248)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCHH
Confidence 467899999999999752 22233999972 2111 1 00 01122221 235999999999
Q ss_pred CCeEEEEEEEcCC---------------------CCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEE
Q psy3823 186 SGGLYACSAINSQ---------------------GEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLV 244 (365)
Q Consensus 186 d~G~Y~C~~~~~~---------------------~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l 244 (365)
|+|.|.|.+.+.. .........|.|.. .....|.+........ +..|+.++|
T Consensus 89 DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~------~~~~~P~v~~~~~~~~-~~~g~~~~L 161 (248)
T 3u2s_H 89 DTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSS------ASTKGPSVFPLAPSSK-STSGGTAAL 161 (248)
T ss_dssp GCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECS------CCCBCCEEEEECCC-------CEEEE
T ss_pred HCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcc------cCCCCCEEEEeCCCcc-ccCCCcEEE
Confidence 9999999998642 11111334556541 0113444442222211 456899999
Q ss_pred EEEEeee-CCCceeEEEeCCCCCCCCCCceeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEE
Q psy3823 245 SCTVDAN-PQAQYFTWAFNNSDTAPRPLTSYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTF 314 (365)
Q Consensus 245 ~C~~~~~-p~~~~~~W~~~~~~~~~~~~~~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 314 (365)
.|.+.+. |.+..+.|++++..............++. .+.|.|.....+| |.|+|.|.|..+.......|
T Consensus 162 ~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l 234 (248)
T 3u2s_H 162 GCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 234 (248)
T ss_dssp EEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEEC
T ss_pred EEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEE
Confidence 9999885 43335999998753211111111122333 3468888888888 99999999987766544433
No 403
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.47 E-value=8.2e-13 Score=112.98 Aligned_cols=168 Identities=13% Similarity=0.136 Sum_probs=101.5
Q ss_pred eEEEEecCCcEEEEEEeCCC--CCcceEEEEeCCCcC-CC-----------------CCCceeE--ecCCeEEEEEEccC
Q psy3823 20 RIYGALRNEQVLVSCTVDAN--PQAQYFTWAFNNSGT-AP-----------------RPLTSYS--IQDGSTSVARYTPT 77 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~--p~~~~v~W~~~~~~~-l~-----------------~~~~~~~--~~~~~~~~l~i~~~ 77 (365)
....+.+|++++|.|...+. ... .+.|+|..... .. ...+... ........|.|.++
T Consensus 31 ~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 109 (256)
T 3sob_H 31 GGGLVQPGGSLRLSCAASGFTFTNS-YIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSL 109 (256)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CcEEEcCCCCEEEEEEeeccccCCC-EEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCC
Confidence 34568999999999995432 234 89999853210 00 0011111 12224456999999
Q ss_pred CCCCCeEEEEEEEeCCC---------C--CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe
Q psy3823 78 SELEYGTLLCWARNEQG---------N--QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA 146 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~---------~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 146 (365)
+.+|+|.|.|.+.+..+ . ......|.|.. .+..+|.+...... ..+.+|+.++|.|.+.+
T Consensus 110 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~-----~~~~~P~i~~~~~~----~~~~~g~~v~L~C~~~~ 180 (256)
T 3sob_H 110 RAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSS-----ASTKGPSVFPLAPS----SKSTSGGTAALGCLVKD 180 (256)
T ss_dssp CGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECS-----SCCBCCEEEEECCC---------TTEEEEEEEEEE
T ss_pred CcccCEEEEEEEecCCCccccccccceeEECCCEEEEEec-----CCCCCCEEEEECCC----cccccCCcEEEEEEEEE
Confidence 99999999999986431 1 11445677731 11345665543322 23568999999999997
Q ss_pred -cCCCCeeEEEeCCeEEeeC--------CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 147 -NPPYKKLIWTHNGITISNN--------ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 147 -~p~~~~i~W~~~~~~l~~~--------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
.|.+..+.| ++..+... ...+.......|.|.....+| |.|+|.+.|..+.
T Consensus 181 ~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~ 240 (256)
T 3sob_H 181 YFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 240 (256)
T ss_dssp EBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGT
T ss_pred EECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCC
Confidence 454556899 44433210 011122223578899888889 9999999988754
No 404
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.46 E-value=4.6e-12 Score=105.13 Aligned_cols=149 Identities=13% Similarity=0.192 Sum_probs=102.3
Q ss_pred cceecCCcEEEEEEEEecCC---CCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCC-ccc
Q psy3823 130 SVLNEGVDIYFDCHIQANPP---YKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGG-STP 205 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~---~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-s~~ 205 (365)
..+..|+.++|.|.+.+..+ +..++|++||.++.. ....|.+..+...++|.|+|.+.+..|... +..
T Consensus 12 ~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG--------aT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~ 83 (304)
T 3shs_A 12 RCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN--------NTATLTVADATSENAGSYKVTVQDTDTMTSVESE 83 (304)
T ss_dssp SSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC--------CSSEEEESSCCGGGCEEEEEEEEETTTCCEEECC
T ss_pred ccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC--------CcceEEeeeccccCCeEEEEEEEECCCCeeeeee
Confidence 46889999999999986533 446999999988653 224788889999999999999999877543 222
Q ss_pred EEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEE--ee-eCC----CceeEEEeCCCCCCCCCCceeEeeC
Q psy3823 206 FDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTV--DA-NPQ----AQYFTWAFNNSDTAPRPLTSYSIQD 278 (365)
Q Consensus 206 ~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~--~~-~p~----~~~~~W~~~~~~~~~~~~~~~~~~~ 278 (365)
+.+... ..+.+....+..+.+..|..+.|.+.+ .| .|+ ...+.|++++... .
T Consensus 84 VtVT~~----------a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~I-----------s 142 (304)
T 3shs_A 84 VFLMEE----------AELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVI-----------D 142 (304)
T ss_dssp CEEECB----------CCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEE-----------E
T ss_pred EEEecc----------CceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEc-----------c
Confidence 333322 222232222233335667889999887 43 342 1249999987521 1
Q ss_pred CCEEEEEEcCCCcccCeEEEEEEEcCCccc
Q psy3823 279 GSTSVARYTPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 279 ~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
+ ...|.+......++|.|+|.+.|..+..
T Consensus 143 g-Aq~lT~sS~TateaG~YtV~VTn~~~~c 171 (304)
T 3shs_A 143 T-TQDITIQEFTADKNGVYTVKVWGESEDS 171 (304)
T ss_dssp S-SSEEEECSCCGGGCEEEEEEEESSSGGG
T ss_pred C-ccccceeeEEecCCeEEEEEEEcCCCCc
Confidence 1 1136777888899999999999998743
No 405
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.46 E-value=6e-13 Score=111.58 Aligned_cols=168 Identities=15% Similarity=0.169 Sum_probs=102.2
Q ss_pred eEEEEecCCcEEEEEEeCCC--CCcceEEEEeCCCcC-C-------CC----------CCceeE--ecCCeEEEEEEccC
Q psy3823 20 RIYGALRNEQVLVSCTVDAN--PQAQYFTWAFNNSGT-A-------PR----------PLTSYS--IQDGSTSVARYTPT 77 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~--p~~~~v~W~~~~~~~-l-------~~----------~~~~~~--~~~~~~~~l~i~~~ 77 (365)
....+.+|+.++|.|...+. +.. .+.|||..... . .. ..+... ........|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~-~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (226)
T 3mlr_H 8 GGEVKQPGQSLKISCKSSGYNFLDS-WIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTL 86 (226)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSC
T ss_pred CCEEEecCCCEEEEEEecCccccCC-EEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCC
Confidence 34678999999999995432 234 89999853210 0 00 011111 12224457999999
Q ss_pred CCCCCeEEEEEEEeCCC-------CC--cccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEe-c
Q psy3823 78 SELEYGTLLCWARNEQG-------NQ--RTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQA-N 147 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~~~~-------~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-~ 147 (365)
+.+|+|.|.|.+.+..+ .. .....|.|.. .+..+|.+..... ...+.+|+.++|.|.+.+ .
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~-----~~~~~P~i~~~~~----~~~~~~g~~~~l~C~~~~~~ 157 (226)
T 3mlr_H 87 QASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSS-----GTTKGPSVFPLAP----SSKSTSGGTAALGCLVKDYF 157 (226)
T ss_dssp CGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECC-----CCCBCCEEEEEEE----EECSTTSSEEEEEEEEEEEB
T ss_pred CcccCEEEEEeEccCCCcccccchhhhhCCccEEeecc-----CCCCCCcEEEecC----cccccCCCCEEEEEEEEEEE
Confidence 99999999999976421 00 1334566621 1134566553221 123458999999999997 4
Q ss_pred CCCCeeEEEeCCeEEee--------CCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCC
Q psy3823 148 PPYKKLIWTHNGITISN--------NASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGE 200 (365)
Q Consensus 148 p~~~~i~W~~~~~~l~~--------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 200 (365)
|.+..+.| ++..+.. ....+.......|.|.....+| |.|+|.+.|..+.
T Consensus 158 p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~ 215 (226)
T 3mlr_H 158 PEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 215 (226)
T ss_dssp SSCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGT
T ss_pred CCCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCC
Confidence 53556999 4332210 0011122223578898888888 9999999997753
No 406
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.46 E-value=3.7e-13 Score=114.87 Aligned_cols=174 Identities=13% Similarity=0.191 Sum_probs=103.4
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCC--e--E-Eee-C---------CCCceEEe-----eceEEEeeecCCCCeE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNG--I--T-ISN-N---------ASAGRIIT-----NQTLVLQSVTRHSGGL 189 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~--~--~-l~~-~---------~~~~~~~~-----~~~l~i~~~~~~d~G~ 189 (365)
..+.+|++++|.|.+.. +.+. +.|+++. . . +.. . ...+.... +.+|.|.+++.+|+|.
T Consensus 13 v~v~~G~~v~L~C~~~~-~~~~-v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~ 90 (252)
T 1oga_E 13 LFRKEGQNVTLSCEQNL-NHDA-MYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAF 90 (252)
T ss_dssp EEEETTCCEEECCEECS-CCSE-EEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCEE
T ss_pred EEEcCCCcEEEEEEeCC-CCCE-EEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCEE
Confidence 46789999999999853 4444 9999842 1 1 110 0 11122221 3589999999999999
Q ss_pred EEEEEEcCCC--CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCceeEEEeCCCCC
Q psy3823 190 YACSAINSQG--EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSDT 266 (365)
Q Consensus 190 Y~C~~~~~~~--~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~~~ 266 (365)
|.|.+.+..+ ........|.|.... ....+|.+.........+..|+.++|.|.+.+. |.+..+.|+++|...
T Consensus 91 Y~C~~~~~~~~~~~~~~~~~l~V~~~~----~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l 166 (252)
T 1oga_E 91 YLCASSSRSSYEQYFGPGTRLTVTEDL----KNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 166 (252)
T ss_dssp EEEEEESSTTSCCEECCCEEEEEESCG----GGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEecCCccceeECCCEEEEEeccc----CCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEEC
Confidence 9999998621 111123456665100 001345544322121124578999999999986 654249999987643
Q ss_pred CCCCCce--eE-----eeCCC---EEEEEEcCCCcc-cCeEEEEEEEcCCccce
Q psy3823 267 APRPLTS--YS-----IQDGS---TSVARYTPTSEL-EYGTLLCWARNEQGSQR 309 (365)
Q Consensus 267 ~~~~~~~--~~-----~~~~~---~s~l~i~~v~~~-d~G~Y~C~a~n~~g~~~ 309 (365)
....... .. ..++. .+.|.|.+.... +.|.|+|.|.|......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 167 HSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp CSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred CCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 2211100 00 12333 245777766554 57899999999876543
No 407
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.46 E-value=7.8e-13 Score=106.87 Aligned_cols=163 Identities=12% Similarity=0.126 Sum_probs=106.3
Q ss_pred eeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 15 KQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 15 ~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
....+....|.+|+++.|.|.+.. +.+..+.|.-. +.. . ..........+.+.+++ +|.+.|.|.+.....
T Consensus 5 v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~----l~~--~-~~~~g~~~~~~~ls~vs-~d~~~~~C~~~c~~~ 75 (196)
T 3bn3_B 5 ADLQPRVAFVERGGSLWLNCSTNC-PRPERGGLETS----LRR--N-GTQRGLRWLARQLVDIR-EPETQPVCFFRCARR 75 (196)
T ss_dssp EEEESSEEEEETTEEEEEEEEECC-SSCSEEEEECS----SEE--E-EEEEETTEEEEEEEEEC-SSEECCEEEEEETTE
T ss_pred EEEcCCCcEEcCCCeEEEEEeCCC-CCCCccEEEEc----cCC--e-eEccccCceEEEEEEEc-cCCCceEEEEECCCC
Confidence 334455567899999999999753 44436777432 111 1 11112222358899998 777779999776544
Q ss_pred CCcccEEEEEEeccccCCCCCCCe-EEEEcCCccCccceecCCcEEEEEEEEecCCCCe--eEEEeCCeEEeeCCCC---
Q psy3823 95 NQRTPCTFHVVKAGECEHPVDKPS-VQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKK--LIWTHNGITISNNASA--- 168 (365)
Q Consensus 95 ~~~~~~~l~V~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~--i~W~~~~~~l~~~~~~--- 168 (365)
.....+.|+| +.+|. +.+.+.+ ..+.+|+.++|.|.+.+..+..+ |.|++++..+......
T Consensus 76 ~~~~~v~l~V---------y~~P~~v~i~~~~----~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~~ 142 (196)
T 3bn3_B 76 TLQARGLIRT---------FQRPDRVELMPLP----PWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEP 142 (196)
T ss_dssp EEEEECEEEE---------EBCCCCCEECCCC----SSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTSC
T ss_pred ceEEEEEEEE---------ecCCCcCEEccCC----ccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeecccccccc
Confidence 4458888998 55554 3444322 24789999999999997555544 6999999988632210
Q ss_pred -ceEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 169 -GRIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 169 -~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
.......++.+.....++...|+|+|.+..+
T Consensus 143 ~~~~~~t~~~~~~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 143 PRARGAVLTATVLARREDHGANFSCRAELDLR 174 (196)
T ss_dssp TTCCCEEEEEEEECCGGGTTCEEEEEEEEECG
T ss_pred ccccceeEEEEEeeeeccCCCeEEEEEEccCC
Confidence 1111124566666666777799999998765
No 408
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=7.9e-13 Score=95.61 Aligned_cols=93 Identities=15% Similarity=0.247 Sum_probs=72.8
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+...+... .+..|+.+.|.|.+.+.|.+. +.|++++..............++ .|.|.+++.+|+|.|+|.|
T Consensus 7 ~~P~i~~~p~~~-~v~~G~~~~l~C~~~g~p~p~-v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a 81 (100)
T 2edj_A 7 GPPIILQGPANQ-TLAVDGTALLKCKATGDPLPV-ISWLKEGFTFPGRDPRATIQEQG---TLQIKNLRISDTGTYTCVA 81 (100)
T ss_dssp SSCEEEECCCCE-EEESSSEEEECCEEECSSCCE-EEEEESSSEESSSCSSCEECTTC---CEEEESCCTTTCCEEEEEE
T ss_pred CCCEEEeCcCCE-EEcCCCcEEEEEEEEEcCCCE-EEEEECCEECCCCCCCEEEcCCC---EEEEccCCcccCEEEEEEE
Confidence 456665544343 388999999999999999998 99999887544333333333333 4999999999999999999
Q ss_pred EcCCccceecEEEEEEcC
Q psy3823 302 RNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~~~ 319 (365)
.|..|..+..+.|.|..+
T Consensus 82 ~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 82 TSSSGETSWSAVLDVTES 99 (100)
T ss_dssp ECSSCCCBCCEEEEEESC
T ss_pred EcCCCCEEEEEEEEEecC
Confidence 999999999999998765
No 409
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.44 E-value=3e-13 Score=98.39 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=75.9
Q ss_pred cccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEE
Q psy3823 8 STDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 8 ~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 87 (365)
+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +................|.|.+++.+|+|.|+|
T Consensus 5 ~~~~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p-~i~W~k~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 81 (103)
T 3qp3_A 5 LDHAPRITL-RMRSHRVPCGQNTRFILNVQSKPTA-EVKWYHNGVE-LQESSKIHYTNTSGVLTLEILDCHTDDSGTYRA 81 (103)
T ss_dssp TCEEEEEEE-CCCCEEEETTCCEEEEEEEEEESCC-EEEEEETTEE-CCCCSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CCCCCEEEe-CCcceEEeCCCeEEEEEEEEecCCC-EEEEEECCEE-CCCCCCEEEEECCCEEEEEEcCCCcccCEEEEE
Confidence 445565544 3355678999999999998889999 9999999988 765555444444555689999999999999999
Q ss_pred EEEeCCCCCcccEEEEE
Q psy3823 88 WARNEQGNQRTPCTFHV 104 (365)
Q Consensus 88 ~a~~~~~~~~~~~~l~V 104 (365)
.|.|..|.....+.|.|
T Consensus 82 ~a~N~~G~~~~~~~l~V 98 (103)
T 3qp3_A 82 VCTNYKGEASDYATLDV 98 (103)
T ss_dssp EEEETTEEEEEEEEEEE
T ss_pred EEEeCCCcEEEEEEEEE
Confidence 99999998888888887
No 410
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=1.2e-12 Score=96.56 Aligned_cols=96 Identities=19% Similarity=0.274 Sum_probs=75.7
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeC-CCEEEEEEcCCCcccCeEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQD-GSTSVARYTPTSELEYGTLLCW 300 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~-~~~s~l~i~~v~~~d~G~Y~C~ 300 (365)
.+|.+...+.. ..+..|+.+.|.|.+.+.|.+. +.|++++...........+..+ ...+.|.|.+++.+|+|.|+|.
T Consensus 7 ~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~-v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm2_A 7 GAPFFEMKLKH-YKIFEGMPVTFTCRVAGNPKPK-IYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIM 84 (110)
T ss_dssp CCCCBSSCCCC-EEEETTCCEEEEEEBCCSSCCE-EEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEE
T ss_pred CCCEEEecCcC-eEEeCCCeEEEEEEEEecCCCE-EEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEE
Confidence 45666544433 3389999999999999999998 9999998765544444444332 4456799999999999999999
Q ss_pred EEcCCccceecEEEEEEcC
Q psy3823 301 ARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 301 a~n~~g~~~~~~~l~v~~~ 319 (365)
|.|..|..+..+.|.|...
T Consensus 85 a~N~~g~~~~~~~l~V~~~ 103 (110)
T 2dm2_A 85 AANPQGRISCTGRLMVQAV 103 (110)
T ss_dssp EECTTCCEEECCCEEEECC
T ss_pred EEECCCeEEEEEEEEEECC
Confidence 9999999999889988754
No 411
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=5.7e-13 Score=99.57 Aligned_cols=94 Identities=11% Similarity=0.096 Sum_probs=75.0
Q ss_pred cccCCeEeeC--CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEE
Q psy3823 8 STDEPVCKQS--QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 8 ~~~~p~~~~~--~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 85 (365)
+..+|.+... ....+.+.+|+.+.|.|.+.+.|.+ .+.|++++.. +..... ..........|.|.+++.+|+|.|
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p-~i~W~k~g~~-l~~~~~-~~~~~~~~~~L~i~~~~~~D~G~Y 94 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRP-QVVWTKGGAP-LDTSRV-HVRTSDFDTVFFVRQAARSDSGEY 94 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCC-EEEEEETTEE-CCCSSC-EEEECSSEEEEEESSCCTTTCEEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCC-EEEEEECCEE-CCCCcE-EEEECCCeEEEEECCCChhcCEEE
Confidence 4456666422 3466788999999999998899999 9999999988 763322 333444456799999999999999
Q ss_pred EEEEEeCCCCCcccEEEEE
Q psy3823 86 LCWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 86 ~C~a~~~~~~~~~~~~l~V 104 (365)
+|.|.|..|.....+.|.|
T Consensus 95 ~C~a~N~~G~~~~~~~l~V 113 (118)
T 2e7c_A 95 ELSVQIENMKDTATIRIRV 113 (118)
T ss_dssp EEEEECSSCEECCEEEEEE
T ss_pred EEEEEeCCCeEEEEEEEEE
Confidence 9999999998888899988
No 412
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=5.1e-13 Score=96.57 Aligned_cols=82 Identities=12% Similarity=0.106 Sum_probs=68.0
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCC
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQ 96 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~ 96 (365)
.......+.+|+.+.|.|.+ .|.+ .++|+|++.. +..........++....|.|.+++.+|+|.|+|.|.|. ..
T Consensus 12 ~~~~~~~v~~G~~v~l~C~v--~p~p-~v~W~k~g~~-l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~ 85 (100)
T 2yuz_A 12 TPLTDQTVNLGKEICLKCEI--SENI-PGKWTKNGLP-VQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NV 85 (100)
T ss_dssp BCCCCEEEETTSCCCEEEEC--SSCC-CEEEEETTEE-CCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CC
T ss_pred ccCCceEEcCCCCEEEEEEe--CCCC-eEEEEECCEE-CCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--Ce
Confidence 34456778999999999999 7888 9999999998 76655555555666778999999999999999999987 44
Q ss_pred cccEEEEE
Q psy3823 97 RTPCTFHV 104 (365)
Q Consensus 97 ~~~~~l~V 104 (365)
..++.|.|
T Consensus 86 ~~~a~L~V 93 (100)
T 2yuz_A 86 TLPAKVHV 93 (100)
T ss_dssp CEEEEEEE
T ss_pred eEEEEEEE
Confidence 57788888
No 413
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=4.7e-13 Score=98.67 Aligned_cols=97 Identities=14% Similarity=0.283 Sum_probs=76.2
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+...+.. ..+..|+.+.|.|.+.+.|.+. +.|++++..................+.|.|.+++.+|+|.|+|.|
T Consensus 8 ~~P~i~~~~~~-~~v~~G~~v~l~C~~~g~p~p~-v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm3_A 8 FRPHFLQAPGD-LTVQEGKLCRMDCKVSGLPTPD-LSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIA 85 (110)
T ss_dssp CCCEEEECCCE-EEEESSSCBCCEEEEECSSCCE-EECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEE
T ss_pred CCCcEEeCCCc-EEEeCCCEEEEEEEEEEcCCCE-EEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEE
Confidence 56766655444 3488999999999999999998 999998875544333333333444567999999999999999999
Q ss_pred EcCCccceecEEEEEEcCc
Q psy3823 302 RNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~~~~ 320 (365)
.|..|..+..+.|.|..++
T Consensus 86 ~n~~g~~~~~~~l~V~~~p 104 (110)
T 2dm3_A 86 TNRAGQNSFSLELVVAAKE 104 (110)
T ss_dssp ECSSCEEEECCEEEEECCC
T ss_pred ECCCCEEEEEEEEEEeCCC
Confidence 9999999999999987553
No 414
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.43 E-value=4.1e-12 Score=106.56 Aligned_cols=164 Identities=13% Similarity=0.127 Sum_probs=101.1
Q ss_pred ceEEEEecCCcEEEEEEeCCCC--CcceEEEEeCCC--c--CCC-C--------CCceeEe--cCCeEEEEEEccCCCCC
Q psy3823 19 QRIYGALRNEQVLVSCTVDANP--QAQYFTWAFNNS--G--TAP-R--------PLTSYSI--QDGSTSVARYTPTSELE 81 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p--~~~~v~W~~~~~--~--~l~-~--------~~~~~~~--~~~~~~~l~i~~~~~~d 81 (365)
+..+.+.+|++++|.|...+.+ .. .+.|||... . .+. . ..+.... .......|.|.+++.+|
T Consensus 8 p~~v~v~~G~~vtL~C~~s~~~~~~~-~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 86 (229)
T 1hxm_A 8 HQTVPVSIGVPATLRCSMKGEAIGNY-YINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERD 86 (229)
T ss_dssp CSEEEEETTCCEEEEEEECSSCGGGS-EEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGG
T ss_pred CCEEEEcCCCCEEEEeEecCCccCcc-eEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhH
Confidence 4567789999999999976443 34 899998532 1 010 0 1111111 12345589999999999
Q ss_pred CeEEEEEEEeCCC------CCc--ccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEec-CCCCe
Q psy3823 82 YGTLLCWARNEQG------NQR--TPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQAN-PPYKK 152 (365)
Q Consensus 82 ~G~Y~C~a~~~~~------~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~-p~~~~ 152 (365)
+|.|.|.+.+... ... ....|.|..... +..+|.+.+.. ..++|.|.+.+. |.+..
T Consensus 87 sg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~---~~~~P~v~~~~------------~~~~L~C~~~g~~P~~i~ 151 (229)
T 1hxm_A 87 EGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQ---PHTKPSVFVMK------------NGTNVACLVKEFYPKDIR 151 (229)
T ss_dssp CEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSC---CCBCCEEEEEE------------ETTEEEEEEESCBSSCCE
T ss_pred CeEEEEEEecCCCcccccchhhcCccEEEEEeccCC---CCcCCcEEEcC------------CCCeEEEEEEEEeCCCEE
Confidence 9999999987531 111 345777732110 01245544311 124899999975 55546
Q ss_pred eEEEeCCeEEeeCCCCceEEeeceEEEeeecC-CCCeEEEEEEEcCCC
Q psy3823 153 LIWTHNGITISNNASAGRIITNQTLVLQSVTR-HSGGLYACSAINSQG 199 (365)
Q Consensus 153 i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~~ 199 (365)
+.|+++ ..+...........++++.+..... ++.|.|+|.+.|..+
T Consensus 152 v~W~~~-~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~ytC~V~h~~~ 198 (229)
T 1hxm_A 152 INLVSS-KKITEFDPAIVISPSGKYNAVKLGKYEDSNSVTCSVQHDNK 198 (229)
T ss_dssp EEEECS-SEEEECCCEEEECTTSSEEEEEEEEETTTTTCEEEEEETTE
T ss_pred EEEecC-CEEecCccceEECCCCcEEEEECcccCCCCcEEEEEEeCCC
Confidence 999999 7775432211112245666655444 788999999998764
No 415
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.43 E-value=5.9e-13 Score=92.72 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=64.0
Q ss_pred eEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCccc
Q psy3823 20 RIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRTP 99 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~ 99 (365)
..+.+.+|+.+.|.|.+.+ |.+ .++|+|++.. +...........+...+|.|.+++.+|+|.|+|.|. .....
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p-~v~W~k~g~~-l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~----n~~~~ 76 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGG-PVRWYKDGER-LASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAP----QDSRI 76 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CST-TCEEEETTEE-CCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECT----TTCEE
T ss_pred eEEEEecCCCEEEEEEECC-CCc-EEEEEECCEE-ccccccEEEeecCCeEEEEecCCCCcccEEEEEEEC----CEEEE
Confidence 4567889999999999854 888 9999999999 776666555556666789999999999999999874 34577
Q ss_pred EEEEE
Q psy3823 100 CTFHV 104 (365)
Q Consensus 100 ~~l~V 104 (365)
+.|+|
T Consensus 77 a~l~V 81 (84)
T 2lu7_A 77 FLVSV 81 (84)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88887
No 416
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.43 E-value=1.1e-12 Score=96.13 Aligned_cols=95 Identities=17% Similarity=0.255 Sum_probs=74.6
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+...+.. ..+..|+.+.|.|.+.+.|.+. +.|++++.... ......+..++..+.|.|.+++.+|+|.|+|.|
T Consensus 12 ~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~-i~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 88 (107)
T 3irg_B 12 SPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPPV-VVWEKGGQQLA-ASERLSFPADGAEHGLLLTAALPTDAGVYVCRA 88 (107)
T ss_dssp EEEEEEECCCC-EEEETTSCEEEEEEEEEESCCE-EEEEETTEECC-CCSSEECCEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeeEcCCcc-EEEeCCCeEEEEEEEeecCCCE-EEEEECCeECC-CCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEE
Confidence 34555544433 3388999999999999999998 99999886443 334444555666778999999999999999999
Q ss_pred EcCCccceecEEEEEEcC
Q psy3823 302 RNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~~~ 319 (365)
.|..|..+..+.|.|..+
T Consensus 89 ~n~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 89 RNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp EETTEEEEEEEEEEEEC-
T ss_pred EcCCCcEEEEEEEEEEcC
Confidence 999999998888888754
No 417
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.43 E-value=6.3e-13 Score=94.76 Aligned_cols=89 Identities=15% Similarity=0.146 Sum_probs=70.4
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCC--CcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEE
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNN--SGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCW 88 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~--~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 88 (365)
+|.+. ..+..+.+.+|+.+.|.|.+.+.|.+ .++|++++ .. +..... .........|.|.+++.+|+|.|+|.
T Consensus 2 ~P~i~-~~~~~~~v~~G~~~~l~C~~~g~P~p-~i~W~k~~~~~~-~~~~~~--~~~~~~~~~L~i~~~~~~D~G~Y~C~ 76 (93)
T 1wit_A 2 KPKIL-TASRKIKIKAGFTHNLEVDFIGAPDP-TATWTVGDSGAA-LAPELL--VDAKSSTTSIFFPSAKRADSGNYKLK 76 (93)
T ss_dssp CCEEC-CCCCEEEECTTBCCEEEEEEECCSSC-EEEEECSTTTCB-CSTTSE--EEEETTEEEEECTTBCGGGCEEEEEE
T ss_pred CCeEE-cCCCceEEeCCCEEEEEEEEEEcCCC-EEEEEECCCCcc-cCCcEE--EEecCCEEEEEECCCChhcCEEEEEE
Confidence 35553 23457779999999999998899999 99999999 66 654432 22223446899999999999999999
Q ss_pred EEeCCCCCcccEEEEE
Q psy3823 89 ARNEQGNQRTPCTFHV 104 (365)
Q Consensus 89 a~~~~~~~~~~~~l~V 104 (365)
|.|..|.....+.|.|
T Consensus 77 a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 77 VKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEcCCCeEEEEEEEEE
Confidence 9999998777777776
No 418
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.43 E-value=1.5e-12 Score=93.87 Aligned_cols=93 Identities=14% Similarity=0.215 Sum_probs=73.4
Q ss_pred CCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEE
Q psy3823 223 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR 302 (365)
Q Consensus 223 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~ 302 (365)
+|.+...+... .+..|+.+.|.|.+.+.|.+. +.|++++.... ...+..+..++..+.|.|.+++.+|+|.|+|.|.
T Consensus 6 ~P~i~~~~~~~-~v~~G~~~~l~C~~~g~p~p~-v~W~~~g~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 82 (99)
T 3puc_A 6 KPVIVTGLQDT-TVSSDSVAKFAVKATGEPRPT-AIWTKDGKAIT-QGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVK 82 (99)
T ss_dssp EEEEEECCCCE-EEESSSCEEEEEEEEEESCCE-EEEEETTEECC-SSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCEEEecCccE-EEeCCCcEEEEEEEEecCCCE-EEEEECCEECc-CCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEE
Confidence 44444443333 388999999999999999998 99999886443 2344555556666789999999999999999999
Q ss_pred cCCccceecEEEEEEc
Q psy3823 303 NEQGSQRTPCTFHVVK 318 (365)
Q Consensus 303 n~~g~~~~~~~l~v~~ 318 (365)
|..|..+..+.|.|..
T Consensus 83 n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 83 NSAGSVSSSCKLTIKA 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCcEeEEEEEEEEe
Confidence 9999998888888763
No 419
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=1.2e-12 Score=94.58 Aligned_cols=92 Identities=20% Similarity=0.338 Sum_probs=73.8
Q ss_pred CCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEE
Q psy3823 114 VDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACS 193 (365)
Q Consensus 114 ~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 193 (365)
..+|.+...+ ....+.+|+.+.|.|.+.|.|.+. +.|++++..+...........+++|.|.+++..|+|.|+|.
T Consensus 6 ~~~P~i~~~p----~~~~v~~G~~~~l~C~~~g~p~p~-v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 80 (100)
T 2edj_A 6 SGPPIILQGP----ANQTLAVDGTALLKCKATGDPLPV-ISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCV 80 (100)
T ss_dssp CSSCEEEECC----CCEEEESSSEEEECCEEECSSCCE-EEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEE
T ss_pred CCCCEEEeCc----CCEEEcCCCcEEEEEEEEEcCCCE-EEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEE
Confidence 3466665544 335688999999999999998887 99999999887444333444567899999999999999999
Q ss_pred EEcCCCCCCcccEEEEEe
Q psy3823 194 AINSQGEGGSTPFDLNIN 211 (365)
Q Consensus 194 ~~~~~~~~~s~~~~l~v~ 211 (365)
+.|..|... ..+.|.|.
T Consensus 81 a~n~~g~~~-~~~~l~V~ 97 (100)
T 2edj_A 81 ATSSSGETS-WSAVLDVT 97 (100)
T ss_dssp EECSSCCCB-CCEEEEEE
T ss_pred EEcCCCCEE-EEEEEEEe
Confidence 999998765 67888887
No 420
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.8e-12 Score=96.84 Aligned_cols=86 Identities=13% Similarity=0.109 Sum_probs=71.3
Q ss_pred ceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceec
Q psy3823 232 RIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTP 311 (365)
Q Consensus 232 ~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 311 (365)
....+..|+.+.|.|.+.|.|.|. +.|+++|.... .....+......+.|.|.+++.+|+|.|+|.|.|..|..+..
T Consensus 32 ~~~~v~~G~~~~l~C~~~g~P~p~-i~W~k~g~~l~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~ 108 (118)
T 2e7c_A 32 QTYIRKVGEQLNLVVPFQGKPRPQ-VVWTKGGAPLD--TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTAT 108 (118)
T ss_dssp SCEEEESSSCEEEEEEEEEESCCE-EEEEETTEECC--CSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCE
T ss_pred CCEEEECCCEEEEEEEEccCCCCE-EEEEECCEECC--CCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEE
Confidence 334588999999999999999998 99999987543 233444455666789999999999999999999999999999
Q ss_pred EEEEEEcCc
Q psy3823 312 CTFHVVKAG 320 (365)
Q Consensus 312 ~~l~v~~~~ 320 (365)
+.|.|..++
T Consensus 109 ~~l~V~~~P 117 (118)
T 2e7c_A 109 IRIRVVEKA 117 (118)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEcCC
Confidence 999887653
No 421
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.42 E-value=1.4e-12 Score=97.07 Aligned_cols=97 Identities=19% Similarity=0.190 Sum_probs=75.7
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCC-CEEEEEEcCCCcccCeEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDG-STSVARYTPTSELEYGTLLCW 300 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~-~~s~l~i~~v~~~d~G~Y~C~ 300 (365)
.+|.+...+... .+..|+.+.|.|.+.+.|.+. +.|++++........+..+..++ ..+.|.|.+++.+|+|.|+|.
T Consensus 14 ~~p~f~~~p~~~-~v~~G~~v~L~C~~~g~p~p~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (116)
T 2kkq_A 14 RAPMFIYKPQSK-KVLEGDSVKLECQISAIPPPK-LFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVS 91 (116)
T ss_dssp BCCCBSSCCCCE-EEETTEEEEEEEEBCCBSCCE-EEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEE
T ss_pred CCCeEEeCCCcE-EEeCCCcEEEEEEEeccCCCE-EEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEE
Confidence 455565544443 389999999999999999997 99999987554433444443333 355799999999999999999
Q ss_pred EEcCCccceecEEEEEEcCc
Q psy3823 301 ARNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 301 a~n~~g~~~~~~~l~v~~~~ 320 (365)
|.|..|..+..+.|.|..++
T Consensus 92 a~N~~G~~~~~~~l~V~~~p 111 (116)
T 2kkq_A 92 AVNEAGVTTCNTRLDVTARP 111 (116)
T ss_dssp EEETTEEEEEEEEEEEECCS
T ss_pred EEcCCCeEEEEEEEEEeCCC
Confidence 99999999999999887654
No 422
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.42 E-value=1.3e-12 Score=112.12 Aligned_cols=177 Identities=12% Similarity=0.158 Sum_probs=100.7
Q ss_pred cceecCCcEEEEEEEEecC-CCCeeEEEeC--Ce---EEe-eCC----------CCceEEe------eceEEEeeecCCC
Q psy3823 130 SVLNEGVDIYFDCHIQANP-PYKKLIWTHN--GI---TIS-NNA----------SAGRIIT------NQTLVLQSVTRHS 186 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p-~~~~i~W~~~--~~---~l~-~~~----------~~~~~~~------~~~l~i~~~~~~d 186 (365)
..+.+|++|+|.|.+.+.+ ....+.||+. +. .+. ... ..+.... +.+|.|.+++..|
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 89 (263)
T 3iu4_H 10 GLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDD 89 (263)
T ss_dssp SEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHHH
Confidence 4678999999999997532 2233999972 21 110 000 1122221 2349999999999
Q ss_pred CeEEEEEEEcCCC-------CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCC-CceeE
Q psy3823 187 GGLYACSAINSQG-------EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ-AQYFT 258 (365)
Q Consensus 187 ~G~Y~C~~~~~~~-------~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~~~ 258 (365)
+|.|.|.+.+..+ ........|.|.. ....+|.+........ +..|+.++|.|.+.+.++ +..+.
T Consensus 90 sG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~------~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~~~~P~~~~v~ 162 (263)
T 3iu4_H 90 TAMYYCARSGVREGRAQAWFAYWGQGTLVTVSA------ASTKGPSVFPLAPSSK-GSTSGTAALGCLVKDYFPEPVTVS 162 (263)
T ss_dssp CEEEEEEEEECC---CEEEEEEECCCEEEEECS------SCCBCCEEEEECCCCC-C----EEEEEEEEEEEBSSCCEEE
T ss_pred CEEEEEEEEeCCCCccccccceeCCceEEEEec------ccCCCCEEEEccCccc-cccCCcEEEEEEEEeEeCCceEEE
Confidence 9999999987531 0111334566641 0013444442111111 457899999999988543 23599
Q ss_pred EEeCCCCCCCCCCc--eeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEE
Q psy3823 259 WAFNNSDTAPRPLT--SYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHV 316 (365)
Q Consensus 259 W~~~~~~~~~~~~~--~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 316 (365)
| ++......... .....++. .+.|.|.....+| |.|+|.|.|..+.......+.+
T Consensus 163 W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 222 (263)
T 3iu4_H 163 W--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 222 (263)
T ss_dssp E--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECCC
T ss_pred E--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEcC
Confidence 9 44322211110 11122332 3468898888888 9999999998876655444443
No 423
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.42 E-value=4.6e-13 Score=98.13 Aligned_cols=91 Identities=18% Similarity=0.242 Sum_probs=73.2
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEE
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR 90 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 90 (365)
+|.+. ..+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +..........++....|.|.+++.+|+|.|+|.|.
T Consensus 13 ~P~~~-~~~~~~~v~~G~~v~l~C~~~g~p~p-~i~W~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 89 (107)
T 3irg_B 13 PPCFL-RFPRPVRVVSGAEAELKCVVLGEPPP-VVVWEKGGQQ-LAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp EEEEE-ECCCCEEEETTSCEEEEEEEEEESCC-EEEEEETTEE-CCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCeeE-cCCccEEEeCCCeEEEEEEEeecCCC-EEEEEECCeE-CCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEE
Confidence 34443 34456778999999999998888999 9999999988 665544443445556689999999999999999999
Q ss_pred eCCCCCcccEEEEE
Q psy3823 91 NEQGNQRTPCTFHV 104 (365)
Q Consensus 91 ~~~~~~~~~~~l~V 104 (365)
|..|.....+.|.|
T Consensus 90 n~~g~~~~~~~l~V 103 (107)
T 3irg_B 90 NAAGEAYAAAAVTV 103 (107)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred cCCCcEEEEEEEEE
Confidence 99888778888888
No 424
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.41 E-value=1.9e-12 Score=115.47 Aligned_cols=179 Identities=13% Similarity=0.125 Sum_probs=107.9
Q ss_pred CceEEEEecCCcEEEEEEeCCCC-------------CcceEEEEeCCCc----CC--CCC--------C-c-eeEe----
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANP-------------QAQYFTWAFNNSG----TA--PRP--------L-T-SYSI---- 64 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p-------------~~~~v~W~~~~~~----~l--~~~--------~-~-~~~~---- 64 (365)
++..+.+.+|++++|.|.....| ....+.||+.... .+ ..+ . . ....
T Consensus 164 q~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~ 243 (401)
T 3f8u_B 164 HTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDD 243 (401)
T ss_dssp SCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESC
T ss_pred CCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecc
Confidence 44567789999999999843222 1237999874210 00 000 0 0 1110
Q ss_pred -----cCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCC-cE
Q psy3823 65 -----QDGSTSVARYTPTSELEYGTLLCWARNEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGV-DI 138 (365)
Q Consensus 65 -----~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~-~v 138 (365)
.......|.|.+++.+|.|.|.|.+.+..+.....+.|.| ..+|.+.+.+... ..+..|+ .+
T Consensus 244 ~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V---------~~pP~V~v~p~~~---~~~~~G~~~v 311 (401)
T 3f8u_B 244 DEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAV---------YKPPKVSLMPATL---ARAAPGEAPP 311 (401)
T ss_dssp CCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEE---------EBCCEEEEESSSC---CCCCTTCCCC
T ss_pred cccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEee---------ccCCeEeeccCcc---eeecCCCccE
Confidence 1123468999999999999999999987766667788888 5688877764321 1135676 89
Q ss_pred EEEEEEEecCCC--CeeEEE-eCC---eEEeeCC----------CCceEEeeceEEEeeecC-CCCeEEEEEEEcCCCCC
Q psy3823 139 YFDCHIQANPPY--KKLIWT-HNG---ITISNNA----------SAGRIITNQTLVLQSVTR-HSGGLYACSAINSQGEG 201 (365)
Q Consensus 139 ~l~C~~~~~p~~--~~i~W~-~~~---~~l~~~~----------~~~~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~~~~ 201 (365)
+|.|.+.+..+. ..+.|. +|+ ..+.... ..+.......|.+..... ++.+.|+|.+.|..-..
T Consensus 312 tL~C~a~GfyP~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~sL~~ 391 (401)
T 3f8u_B 312 ELLCLVSHFYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSLPA 391 (401)
T ss_dssp CEEEEEEEEBSSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTTSCT
T ss_pred EEEEEecCCcCCCCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCCCCC
Confidence 999999985433 459995 765 2221110 011111123455554432 34569999999987544
Q ss_pred CcccEEE
Q psy3823 202 GSTPFDL 208 (365)
Q Consensus 202 ~s~~~~l 208 (365)
.++...+
T Consensus 392 g~rs~sV 398 (401)
T 3f8u_B 392 SGRSAEV 398 (401)
T ss_dssp TCEEEEE
T ss_pred CcceEEE
Confidence 3333333
No 425
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.41 E-value=4e-13 Score=98.34 Aligned_cols=86 Identities=16% Similarity=0.230 Sum_probs=71.9
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCC
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQ 96 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~ 96 (365)
..+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +................|.|.+++.+|+|.|+|.|.|..|..
T Consensus 19 ~~p~~~~v~~G~~v~L~C~~~g~p~p-~v~W~k~g~~-l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 96 (106)
T 1nct_A 19 TKPRSMTVYEGESARFSCDTDGEPVP-TVTWLRKGQV-LSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQ 96 (106)
T ss_dssp ECCCCEEESSSSCEECCEEEECSSCC-BCCBCSSSSC-CTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBC
T ss_pred ECCCCEEEeCCCcEEEEEEEEEcCCC-EEEEEECCEE-CCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeE
Confidence 34556778999999999998889999 9999999988 765554444444455689999999999999999999999998
Q ss_pred cccEEEEE
Q psy3823 97 RTPCTFHV 104 (365)
Q Consensus 97 ~~~~~l~V 104 (365)
...+.|.|
T Consensus 97 ~~~~~l~V 104 (106)
T 1nct_A 97 EAEFTLTI 104 (106)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 88888887
No 426
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.41 E-value=1.4e-12 Score=93.67 Aligned_cols=86 Identities=15% Similarity=0.194 Sum_probs=70.8
Q ss_pred CCceEEEEecCCcEEEEEEeCCC-CCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDAN-PQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGN 95 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~-p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~ 95 (365)
..+....+.+|+.+.|.|.+.+. |.+ .+.|++++.. +................|.|.+++.+|.|.|+|.|.|..|.
T Consensus 6 ~~~~~~~v~~G~~v~l~C~~~g~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (97)
T 2bk8_A 6 GQIMHAVGEEGGHVKYVCKIENYDQST-QVTWYFGVRQ-LENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGE 83 (97)
T ss_dssp CCCCCEEECTTCCEEEEEEEESCCTTC-EEEEEETTEE-CCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred ccCcCEEEcCCCcEEEEEEEeccCCCC-EEEEEECCEE-CcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCe
Confidence 44566788999999999998786 888 9999999988 66554443333444568999999999999999999999998
Q ss_pred CcccEEEEE
Q psy3823 96 QRTPCTFHV 104 (365)
Q Consensus 96 ~~~~~~l~V 104 (365)
....+.|.|
T Consensus 84 ~~~~~~l~V 92 (97)
T 2bk8_A 84 DSSYAELFV 92 (97)
T ss_dssp EEEEEEEEE
T ss_pred EeEEEEEEE
Confidence 888888887
No 427
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.41 E-value=2.1e-12 Score=93.24 Aligned_cols=93 Identities=13% Similarity=0.163 Sum_probs=72.4
Q ss_pred CCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCC-CCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 223 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAP-RPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 223 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~-~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
+|.+...+.. ..+..|+.+.|.|.+.+.|.+. +.|++++..... ...+.....++..+.|.|.+++.+|+|.|+|.|
T Consensus 5 pP~i~~~~~~-~~~~~G~~~~l~C~~~g~p~p~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 82 (100)
T 3irg_A 5 PPKIEALPSD-ISIDEGKVLTVACAFTGEPTPE-VTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEEECCCCSE-EEEETTSEEEEEEEEEEESCCE-EEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCeeecCCCc-EEEcCCCcEEEEEEEEEcCCCc-eEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEE
Confidence 3444433333 3488999999999999999998 999998865432 223344555566678999999999999999999
Q ss_pred EcCCccceecEEEEEE
Q psy3823 302 RNEQGSQRTPCTFHVV 317 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~ 317 (365)
.|..|..+..+.|.|.
T Consensus 83 ~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 83 GNEFGSDSATVNIHIR 98 (100)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEEEE
Confidence 9999999888888775
No 428
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=7.5e-13 Score=101.56 Aligned_cols=85 Identities=9% Similarity=0.112 Sum_probs=68.8
Q ss_pred ceeeeecCceEEEEEEEeeeCCCceeEEEeCCC----------------------------CCCCCCCceeEeeCCCEEE
Q psy3823 232 RIYGALRNEQVLVSCTVDANPQAQYFTWAFNNS----------------------------DTAPRPLTSYSIQDGSTSV 283 (365)
Q Consensus 232 ~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~----------------------------~~~~~~~~~~~~~~~~~s~ 283 (365)
....+..|+.+.|.|.+.|.|.|. +.|++++. .......+..+...+..+.
T Consensus 26 ~~~~v~~G~~v~L~C~~~G~P~P~-i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 26 DTIVVVAGNKLRLDVPISGDPAPT-VIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CEEEESSSSCCCCEEECCSBSCCE-EEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCEEEeCCCeEEEEEEEEEcCCCe-EEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 344589999999999999999998 99999982 1112223444455566778
Q ss_pred EEEcCCCcccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 284 ARYTPTSELEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 284 l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999999888888774
No 429
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.41 E-value=7.3e-13 Score=97.24 Aligned_cols=94 Identities=18% Similarity=0.205 Sum_probs=63.1
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+....... .+..|+.+.|.|.+.+.|.+. +.|++++...... ........ ...|.|.+++.+|+|.|+|.|
T Consensus 9 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~-i~W~~~~~~~~~~-~~~~~~~~--~~~L~i~~v~~~D~G~Y~C~a 83 (108)
T 3kvq_A 9 VAPTITGNLENQ-TTSIGESIEVSCTASGNPPPQ-IMWFKDNETLVED-SGIVLKDG--NRNLTIRRVRKEDEGLYTCQA 83 (108)
T ss_dssp --CCCBSCCCCE-EEETTCCEEEECBCC----CC-EEEEESSSBCCCB-TTEEEETT--TTEEEECSCCGGGCEEEEEEE
T ss_pred CCCceecCCCCe-EEeCCCeEEEEEECcCcCCCe-EEEEECCeEcccC-CCeEEeCC--CcEEEEeecCcccCEEEEEEE
Confidence 677776555443 388999999999999999998 9999988754322 22222222 245999999999999999999
Q ss_pred EcCCccceecEEEEEEcCc
Q psy3823 302 RNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~~~~ 320 (365)
.|..|.....+.|.|..++
T Consensus 84 ~n~~g~~~~~~~l~V~~~~ 102 (108)
T 3kvq_A 84 CSVLGCAKVEAFFIIEGAQ 102 (108)
T ss_dssp C----CEEEEEEEEEEC--
T ss_pred EeCCCceEEEEEEEEeCCC
Confidence 9999999999999887653
No 430
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.40 E-value=8.5e-13 Score=95.41 Aligned_cols=92 Identities=13% Similarity=0.168 Sum_probs=72.0
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCce-eEecCCeEEEEEEccCCCCCCeEEEEE
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTS-YSIQDGSTSVARYTPTSELEYGTLLCW 88 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 88 (365)
++|.+.. .+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +...... ..........|.|.+++.+|+|.|+|.
T Consensus 4 ~~P~~~~-~p~~~~~~~G~~~~l~C~~~g~p~p-~v~W~~~g~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 80 (100)
T 2kdg_A 4 GPPRFIQ-VPENMSIDEGRFCRMDFKVSGLPAP-DVSWYLNGRT-VQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACV 80 (100)
T ss_dssp EEEECCC-CCCCEEEETTCCEEEEEECEEESCC-EEEEEETTEE-ECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEe-CCCCEEecCCCEEEEEEEEEeeCCC-EEEEEECCEE-CcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEE
Confidence 3444432 3456778999999999998789999 9999999987 6554332 222334446899999999999999999
Q ss_pred EEeCCCCCcccEEEEE
Q psy3823 89 ARNEQGNQRTPCTFHV 104 (365)
Q Consensus 89 a~~~~~~~~~~~~l~V 104 (365)
|.|..|.....+.|.|
T Consensus 81 a~n~~g~~~~~~~l~V 96 (100)
T 2kdg_A 81 AKNRAGEATFTVQLDV 96 (100)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEcCCCeEEEEEEEEE
Confidence 9999998888888888
No 431
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.40 E-value=2.7e-12 Score=107.62 Aligned_cols=171 Identities=13% Similarity=0.160 Sum_probs=99.8
Q ss_pred cceecCCcEEEEEEEEecC-CCCeeEEEeC--Ce---EEe-e-C----------CCCceEEe------eceEEEeeecCC
Q psy3823 130 SVLNEGVDIYFDCHIQANP-PYKKLIWTHN--GI---TIS-N-N----------ASAGRIIT------NQTLVLQSVTRH 185 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p-~~~~i~W~~~--~~---~l~-~-~----------~~~~~~~~------~~~l~i~~~~~~ 185 (365)
..+.+|++|+|.|.+.+.. ....+.|++. +. .+. . . ...+.... +.+|.|.+++..
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (226)
T 3mlr_H 10 EVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQAS 89 (226)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCGG
T ss_pred EEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCcc
Confidence 3578999999999997532 2233999972 21 110 0 0 00122211 235999999999
Q ss_pred CCeEEEEEEEcCCC--------CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCC-Cce
Q psy3823 186 SGGLYACSAINSQG--------EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ-AQY 256 (365)
Q Consensus 186 d~G~Y~C~~~~~~~--------~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-~~~ 256 (365)
|+|.|.|.+.+..+ ........|.|.. ....+|.+....... .+..|+.+.|.|.+.+.++ +..
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~------~~~~~P~i~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~~ 162 (226)
T 3mlr_H 90 DTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSS------GTTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVT 162 (226)
T ss_dssp GCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECC------CCCBCCEEEEEEEEE-CSTTSSEEEEEEEEEEEBSSCCE
T ss_pred cCEEEEEeEccCCCcccccchhhhhCCccEEeecc------CCCCCCcEEEecCcc-cccCCCCEEEEEEEEEEECCCeE
Confidence 99999999976421 0111233566641 001344443222111 1457899999999988543 335
Q ss_pred eEEEeCCCCCCCCCCc--eeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCcccee
Q psy3823 257 FTWAFNNSDTAPRPLT--SYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRT 310 (365)
Q Consensus 257 ~~W~~~~~~~~~~~~~--~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 310 (365)
+.| ++......... .....++. .+.|.|.+...+| |.|+|.|.|..+....
T Consensus 163 v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~ 218 (226)
T 3mlr_H 163 VSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 218 (226)
T ss_dssp EEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEE
T ss_pred EEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCe
Confidence 899 44332221111 11122332 3468899888888 9999999998776543
No 432
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.40 E-value=9.7e-13 Score=94.90 Aligned_cols=84 Identities=18% Similarity=0.220 Sum_probs=69.0
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCc-eeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLT-SYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +..... .....++...+|.|.+++.+|+|.|+|.|.|..|...
T Consensus 12 ~~~~~v~~G~~v~l~C~~~g~p~p-~v~W~k~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~ 89 (99)
T 1u2h_A 12 LMDQSVREGQDVIMSIRVQGEPKP-VVSWLRNRQP-VRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQ 89 (99)
T ss_dssp CCCEEEETTCCEEEEEEEEEESCC-EEEEEETTEE-CCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred CCceEecCCCEEEEEEEEEEcCCC-EEEEEECCEE-CCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCcee
Confidence 445578999999999998889999 9999999988 654433 2333455556899999999999999999999998887
Q ss_pred ccEEEEE
Q psy3823 98 TPCTFHV 104 (365)
Q Consensus 98 ~~~~l~V 104 (365)
..+.|.|
T Consensus 90 ~~~~l~V 96 (99)
T 1u2h_A 90 CEARLEV 96 (99)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7788877
No 433
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.40 E-value=1.4e-12 Score=92.28 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=61.9
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRT 98 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~ 98 (365)
...+.+.+|+.+.|.|.+.+ |.+ .++|+|||.. +..........++...+|.|.+++.+|+|.|+|.|.| ...
T Consensus 13 ~~~v~~~~g~~v~l~C~v~~-p~~-~v~W~k~g~~-i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~ 85 (91)
T 2lvc_A 13 HVFVHAITSECVMLACEVDR-EDA-PVRWYKDGQE-VEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD----ECA 85 (91)
T ss_dssp CEEEECCTTCCEEEEEECSC-TTS-CCEEEETTSC-CCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS----CEE
T ss_pred CeEEEEECCCcEEEEEEECC-CCc-EEEEEECCEE-eeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc----eEE
Confidence 34566779999999999854 888 8999999998 7766655555566667899999999999999999854 345
Q ss_pred cEEEEE
Q psy3823 99 PCTFHV 104 (365)
Q Consensus 99 ~~~l~V 104 (365)
++.|+|
T Consensus 86 ~~~ltV 91 (91)
T 2lvc_A 86 YFTVTI 91 (91)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 555543
No 434
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.40 E-value=1.2e-12 Score=95.87 Aligned_cols=93 Identities=14% Similarity=0.177 Sum_probs=74.0
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
..|.+...+... .+..|+.+.|.|.+.|.|.|. +.|+++|.... ...............|.|.+++.+|+|.|+|.|
T Consensus 13 ~~~~i~~~p~~~-~v~~G~~v~L~C~~~g~p~p~-v~W~k~g~~l~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 89 (106)
T 1nct_A 13 LAARILTKPRSM-TVYEGESARFSCDTDGEPVPT-VTWLRKGQVLS-TSARHQVTTTKYKSTFEISSVQASDEGNYSVVV 89 (106)
T ss_dssp CCCEEEECCCCE-EESSSSCEECCEEEECSSCCB-CCBCSSSSCCT-TCSSEEEEECSSEEEEEECCCCSSCCSEEEECC
T ss_pred CCCEEEECCCCE-EEeCCCcEEEEEEEEEcCCCE-EEEEECCEECC-CCCCEEEEECCCEEEEEECcCCchhCEEEEEEE
Confidence 456665544443 388999999999999999998 99999886443 334444444555678999999999999999999
Q ss_pred EcCCccceecEEEEEE
Q psy3823 302 RNEQGSQRTPCTFHVV 317 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~ 317 (365)
.|..|..+.++.|.|.
T Consensus 90 ~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 90 ENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp BCSSCBCCEEEEEEEC
T ss_pred EeCCCeEEEEEEEEEE
Confidence 9999999888888774
No 435
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.39 E-value=8.6e-13 Score=101.24 Aligned_cols=85 Identities=9% Similarity=0.068 Sum_probs=68.8
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCC----------------------------CcCCC-CCCceeEecCCe
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNN----------------------------SGTAP-RPLTSYSIQDGS 68 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~----------------------------~~~l~-~~~~~~~~~~~~ 68 (365)
.+..+.+.+|+.++|.|.+.+.|.| .++|+|++ .. +. ..........+.
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~G~P~P-~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~r~~i~~~~~ 101 (139)
T 1gxe_A 24 IPDTIVVVAGNKLRLDVPISGDPAP-TVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKL-LCETEGRVRVETTKD 101 (139)
T ss_dssp CCCEEEESSSSCCCCEEECCSBSCC-EEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCC-CCSCSSSCEEEEETT
T ss_pred CCCCEEEeCCCeEEEEEEEEEcCCC-eEEEEECCccccccccccccccccccccccccccccee-ecCCCCeEEEEeCCC
Confidence 4567889999999999999999999 99999998 33 31 222223333444
Q ss_pred EEEEEEccCCCCCCeEEEEEEEeCCCCCcccEEEEE
Q psy3823 69 TSVARYTPTSELEYGTLLCWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 69 ~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~~~l~V 104 (365)
.+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 102 ~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 102 RSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp EEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEE
Confidence 568999999999999999999999998888888887
No 436
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.39 E-value=3.3e-12 Score=109.19 Aligned_cols=177 Identities=13% Similarity=0.200 Sum_probs=102.2
Q ss_pred cceecCCcEEEEEEEEecC-CCCeeEEEeC--Ce---EEe-e-----------CCCCceEEe------eceEEEeeecCC
Q psy3823 130 SVLNEGVDIYFDCHIQANP-PYKKLIWTHN--GI---TIS-N-----------NASAGRIIT------NQTLVLQSVTRH 185 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p-~~~~i~W~~~--~~---~l~-~-----------~~~~~~~~~------~~~l~i~~~~~~ 185 (365)
..+.+|++|+|.|...+.+ ....+.|++. +. .+. . ....+.... +.+|.|.+++.+
T Consensus 33 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 112 (256)
T 3sob_H 33 GLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRAE 112 (256)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCcc
Confidence 3578999999999997532 2234999972 21 110 0 001122221 224999999999
Q ss_pred CCeEEEEEEEcCCC----------CCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCC
Q psy3823 186 SGGLYACSAINSQG----------EGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQA 254 (365)
Q Consensus 186 d~G~Y~C~~~~~~~----------~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~ 254 (365)
|+|.|.|.+.+..+ ........|.|.. ....+|.+....... .+..|+.++|.|.+.+. |.+
T Consensus 113 DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~------~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~~~~p~~ 185 (256)
T 3sob_H 113 DTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSS------ASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEP 185 (256)
T ss_dssp GCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECS------SCCBCCEEEEECCC------TTEEEEEEEEEEEBSSC
T ss_pred cCEEEEEEEecCCCccccccccceeEECCCEEEEEec------CCCCCCEEEEECCCc-ccccCCcEEEEEEEEEEECCC
Confidence 99999999987531 0112334566641 011334443211111 15689999999999884 433
Q ss_pred ceeEEEeCCCCCCCCCCc--eeEeeCCC---EEEEEEcCCCcccCeEEEEEEEcCCccceecEEEEE
Q psy3823 255 QYFTWAFNNSDTAPRPLT--SYSIQDGS---TSVARYTPTSELEYGTLLCWARNEQGSQRTPCTFHV 316 (365)
Q Consensus 255 ~~~~W~~~~~~~~~~~~~--~~~~~~~~---~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 316 (365)
..+.| ++......... .....++. .+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 186 ~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~ 249 (256)
T 3sob_H 186 VTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 249 (256)
T ss_dssp CEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred eEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEecc
Confidence 35899 44433211111 11122332 3468899988889 9999999998877655555443
No 437
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.39 E-value=2.9e-12 Score=105.84 Aligned_cols=161 Identities=12% Similarity=0.138 Sum_probs=94.3
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCC--e---EEeeC-----CCCceEEe-------eceEEEeeecCCCCeEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNG--I---TISNN-----ASAGRIIT-------NQTLVLQSVTRHSGGLYAC 192 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~--~---~l~~~-----~~~~~~~~-------~~~l~i~~~~~~d~G~Y~C 192 (365)
..+.+|++++|.|.+.+.. + .+.|++.. . .+... ...+.... ..+|.|.+++..|+|.|.|
T Consensus 11 v~v~~G~~v~L~C~~~~~~-~-~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (207)
T 1ypz_E 11 LSLHEGTDSALRCNFTTTM-R-SVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFC 88 (207)
T ss_dssp EEEETTCCEEEEEEESSCC-S-EEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEE
T ss_pred EEEccCCcEEEEEEEeCCC-e-EEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEE
Confidence 3678999999999998643 3 49999832 1 11100 01112211 2479999999999999999
Q ss_pred EEEcCCCC----------CCcccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCC--CceeEEE
Q psy3823 193 SAINSQGE----------GGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQ--AQYFTWA 260 (365)
Q Consensus 193 ~~~~~~~~----------~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--~~~~~W~ 260 (365)
.+.+..+. .......|.|. ..+.... .+... +..+ .+.|.|.+.+.++ +. +.|+
T Consensus 89 ~~~~~~~~~p~~~~~~~~~~~~~t~L~V~----------~~~~~~~-~P~v~-~~~~-~~~l~C~~~g~~P~~~~-v~W~ 154 (207)
T 1ypz_E 89 AADTWHISEGYELGTDKLVFGQGTQVTVE----------PKSQPPA-KPSVF-IMKN-GTNVACLVKDFYPKEVT-ISLR 154 (207)
T ss_dssp EEECBCCCTTCCCCCCCCEECCCEEEEEE----------CCCCCCC-CCEEE-EEEE-TTEEEEEEEEESSSCCE-EEEE
T ss_pred EEecCCcccccccccceeeecCccEEEEc----------cCCCCCC-CCeEE-EeCC-CCeEEEEEeeEeCCCeE-EEEe
Confidence 99986421 11234567776 2211111 11111 2222 3799999988644 45 9999
Q ss_pred eCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccce
Q psy3823 261 FNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQR 309 (365)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 309 (365)
++ ..............++..... .....+|.|.|+|.|.|..+..+
T Consensus 155 ~~-~~l~~~~~~~~~~~~g~y~~~--~~~~~~~~~~ytC~v~~~~~~~~ 200 (207)
T 1ypz_E 155 SS-KKIVEFDPAIVISPSGKYSAV--KLGQYGDSNSVTCSVQHNSETVH 200 (207)
T ss_dssp CS-SEEEECCCEEEECTTSSEEEE--ECEEESSTTTCEEEEEETTEEEE
T ss_pred cC-CcccCCccceEEcCCCcEEEE--EeecccCCCcEEEEEEECCccEe
Confidence 98 532211111122334543322 22333678999999999887654
No 438
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.38 E-value=1.3e-12 Score=94.30 Aligned_cols=91 Identities=12% Similarity=0.093 Sum_probs=71.8
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeE-ecCCeEEEEEEccCCCCCCeEEEEEE
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYS-IQDGSTSVARYTPTSELEYGTLLCWA 89 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~a 89 (365)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +........ ........|.|.+++.+|+|.|+|.|
T Consensus 5 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p-~v~W~k~g~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 81 (99)
T 1g1c_A 5 APKIFE-RIQSQTVGQGSDAHFRVRVVGKPDP-ECEWYKNGVK-IERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKA 81 (99)
T ss_dssp EEEEEE-CCCCEEEETTSCEEEEEEEEEESCC-EEEEEETTEE-CCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCceEe-cCcceEEcCCCcEEEEEEEEEeCCC-EEEEEECCEE-CCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEE
Confidence 344433 3445678999999999998889999 9999999988 665444322 22344568999999999999999999
Q ss_pred EeCCCCCcccEEEEE
Q psy3823 90 RNEQGNQRTPCTFHV 104 (365)
Q Consensus 90 ~~~~~~~~~~~~l~V 104 (365)
.|..|.....+.|.|
T Consensus 82 ~N~~g~~~~~~~l~V 96 (99)
T 1g1c_A 82 INIAGETSSHAFLLV 96 (99)
T ss_dssp EETTEEEEEEEEEEE
T ss_pred EECCCcEEEEEEEEE
Confidence 999988888888887
No 439
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=97.71 Aligned_cols=88 Identities=15% Similarity=0.217 Sum_probs=70.0
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCC-CCceeEecCCeEEEEEEccCCCCCCeEEEEEE
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPR-PLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 89 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 89 (365)
+|.+ ...+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +.. ........++ .|.|.+++.+|+|.|+|.|
T Consensus 8 pP~i-~~~p~~~~v~~G~~v~l~C~~~g~p~p-~i~W~k~g~~-~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a 81 (118)
T 2eo9_A 8 PPVI-RQGPVNQTVAVDGTFVLSCVATGSPVP-TILWRKDGVL-VSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIA 81 (118)
T ss_dssp SCCC-SBCCCCEEEETTCEEEEECBCCCSSCC-EEEEEESSSB-CCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEE
T ss_pred CCEE-EcCCCCEEEcCCCeEEEEEEEEecCCC-EEEEEECCEE-CcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEE
Confidence 3443 334556778999999999998899999 9999999988 653 2333333444 7999999999999999999
Q ss_pred EeCCCCCcccEEEEE
Q psy3823 90 RNEQGNQRTPCTFHV 104 (365)
Q Consensus 90 ~~~~~~~~~~~~l~V 104 (365)
.|..|.....+.|.|
T Consensus 82 ~n~~g~~~~~~~l~V 96 (118)
T 2eo9_A 82 STPSGEATWSAYIEV 96 (118)
T ss_dssp ECSSCEEEEECCEEE
T ss_pred EcCCCcEEEEEEEEE
Confidence 999998777777888
No 440
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.38 E-value=1.6e-12 Score=93.67 Aligned_cols=84 Identities=11% Similarity=0.171 Sum_probs=69.7
Q ss_pred ceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcc
Q psy3823 19 QRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRT 98 (365)
Q Consensus 19 ~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~ 98 (365)
+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +..........+.....|.|.+++.+|+|.|+|.|.|..|....
T Consensus 13 ~~~~~v~~G~~~~l~C~~~g~p~p-~v~W~~~g~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 90 (99)
T 3puc_A 13 LQDTTVSSDSVAKFAVKATGEPRP-TAIWTKDGKA-ITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSS 90 (99)
T ss_dssp CCCEEEESSSCEEEEEEEEEESCC-EEEEEETTEE-CCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CccEEEeCCCcEEEEEEEEecCCC-EEEEEECCEE-CcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeE
Confidence 445678999999999998888999 9999999988 66555444444455568999999999999999999999888777
Q ss_pred cEEEEE
Q psy3823 99 PCTFHV 104 (365)
Q Consensus 99 ~~~l~V 104 (365)
.+.|.|
T Consensus 91 ~~~l~V 96 (99)
T 3puc_A 91 SCKLTI 96 (99)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777777
No 441
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=2.1e-12 Score=93.14 Aligned_cols=89 Identities=17% Similarity=0.293 Sum_probs=68.9
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+...+... .+..|+.+.|.|.+.+.|.|. +.|++++....... . ........|.|.+++.+|+|.|+|.|
T Consensus 10 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~g~p~p~-v~W~~~g~~~~~~~--~--~~~~~~~~L~i~~v~~~D~G~Y~C~a 83 (99)
T 2yr3_A 10 VAPSFSSVLKDC-AVIEGQDFVLQCSVRGTPVPR-ITWLLNGQPIQYAR--S--TCEAGVAELHIQDALPEDHGTYTCLA 83 (99)
T ss_dssp EEEEEEECCCCE-EECTTCCEEEECEEEEESCCC-CEEEESSSBCSSCC--C--EEETTEEEEEECSCCTTCCBCEEEEE
T ss_pred cCCceeecCCCC-EEeCCCeEEEEEEEeeeCCCe-EEEEECCEECcccc--e--EeeCCeEEEEECCCChhhCEEEEEEE
Confidence 455555444333 388999999999999999998 99999887543221 1 12234567999999999999999999
Q ss_pred EcCCccceecEEEEE
Q psy3823 302 RNEQGSQRTPCTFHV 316 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v 316 (365)
.|..|..+..+.|.|
T Consensus 84 ~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 84 ENALGQVSCSAWVTV 98 (99)
T ss_dssp ECSSCEEEEECCEEE
T ss_pred EECCCeEEEEEEEEE
Confidence 999999888877776
No 442
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=3.6e-12 Score=92.10 Aligned_cols=91 Identities=10% Similarity=0.088 Sum_probs=70.7
Q ss_pred CCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEE
Q psy3823 223 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR 302 (365)
Q Consensus 223 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~ 302 (365)
+|.+...... ..+..|+.+.|.|.+ .|.+. +.|+++|.... ...+..+..++..+.|.|.++..+|+|.|+|.|.
T Consensus 7 p~~~~~~~~~-~~v~~G~~v~l~C~v--~p~p~-v~W~k~g~~l~-~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (100)
T 2yuz_A 7 GLKILTPLTD-QTVNLGKEICLKCEI--SENIP-GKWTKNGLPVQ-ESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPD 81 (100)
T ss_dssp CCCCSBCCCC-EEEETTSCCCEEEEC--SSCCC-EEEEETTEECC-CCSSEEEEECSSEEEEEESSCCGGGCSEEEEEES
T ss_pred CCEEeccCCc-eEEcCCCCEEEEEEe--CCCCe-EEEEECCEECC-CCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEc
Confidence 4455444433 338999999999999 78888 99999987543 3445566667777889999999999999999999
Q ss_pred cCCccceecEEEEEEcCc
Q psy3823 303 NEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 303 n~~g~~~~~~~l~v~~~~ 320 (365)
|. ..+.++.|.|..++
T Consensus 82 N~--~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 82 AY--NVTLPAKVHVISGP 97 (100)
T ss_dssp SS--CCCEEEEEEEECCS
T ss_pred CC--CeeEEEEEEEeCCC
Confidence 98 55667788887654
No 443
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.37 E-value=7.7e-12 Score=89.78 Aligned_cols=83 Identities=16% Similarity=0.234 Sum_probs=67.8
Q ss_pred eeecCceEEEEEEEeee-CCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEE
Q psy3823 235 GALRNEQVLVSCTVDAN-PQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCT 313 (365)
Q Consensus 235 ~~~~g~~~~l~C~~~~~-p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 313 (365)
.+..|+.+.|.|.+.+. |.+. +.|++++.... ......+...+..+.|.|.+++.+|+|.|+|.|.|..|.....+.
T Consensus 12 ~v~~G~~v~l~C~~~g~~p~~~-v~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 89 (97)
T 2bk8_A 12 VGEEGGHVKYVCKIENYDQSTQ-VTWYFGVRQLE-NSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAE 89 (97)
T ss_dssp EECTTCCEEEEEEEESCCTTCE-EEEEETTEECC-SSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEcCCCcEEEEEEEeccCCCCE-EEEEECCEECc-CCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEE
Confidence 38899999999999997 8887 99999886433 233444444555678999999999999999999999999988888
Q ss_pred EEEEcC
Q psy3823 314 FHVVKA 319 (365)
Q Consensus 314 l~v~~~ 319 (365)
|.|...
T Consensus 90 l~V~~~ 95 (97)
T 2bk8_A 90 LFVKGV 95 (97)
T ss_dssp EEETTT
T ss_pred EEEEec
Confidence 887643
No 444
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.37 E-value=1.8e-12 Score=95.04 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=63.5
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCe
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYG 83 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G 83 (365)
|.+.+..+|.+.. .+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +............ ..|.|.+++.+|+|
T Consensus 3 ~~v~~~~~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p-~i~W~~~~~~-~~~~~~~~~~~~~--~~L~i~~v~~~D~G 77 (108)
T 3kvq_A 3 LTVLERVAPTITG-NLENQTTSIGESIEVSCTASGNPPP-QIMWFKDNET-LVEDSGIVLKDGN--RNLTIRRVRKEDEG 77 (108)
T ss_dssp --------CCCBS-CCCCEEEETTCCEEEECBCC----C-CEEEEESSSB-CCCBTTEEEETTT--TEEEECSCCGGGCE
T ss_pred eeECccCCCceec-CCCCeEEeCCCeEEEEEECcCcCCC-eEEEEECCeE-cccCCCeEEeCCC--cEEEEeecCcccCE
Confidence 3455666776644 3455678999999999998889999 9999999988 6554443332222 27999999999999
Q ss_pred EEEEEEEeCCCCCcccEEEEE
Q psy3823 84 TLLCWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 84 ~Y~C~a~~~~~~~~~~~~l~V 104 (365)
.|+|.|.|..|.....+.|.|
T Consensus 78 ~Y~C~a~n~~g~~~~~~~l~V 98 (108)
T 3kvq_A 78 LYTCQACSVLGCAKVEAFFII 98 (108)
T ss_dssp EEEEEEC----CEEEEEEEEE
T ss_pred EEEEEEEeCCCceEEEEEEEE
Confidence 999999999998888888888
No 445
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.36 E-value=2.4e-12 Score=101.00 Aligned_cols=96 Identities=11% Similarity=0.180 Sum_probs=74.0
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEe-eCCCEEEEEEcCCCcccCeEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSI-QDGSTSVARYTPTSELEYGTLLCW 300 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~-~~~~~s~l~i~~v~~~d~G~Y~C~ 300 (365)
.+|.+...... ..+..|+.+.|.|.+.+.|.+. +.|++++..... .....+. .......|.|.+++.+|+|.|+|.
T Consensus 40 ~~P~~~~~~~~-~~v~~G~~v~L~C~~~g~P~p~-v~W~k~g~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 116 (154)
T 1fhg_A 40 VKPYFTKTILD-MEVVEGSAARFDCKVEGYPDPE-VMWFKDDNPVKE-SRHFQIDYDEEGNCSLTISEVCGDDDAKYTCK 116 (154)
T ss_dssp EEEEEEECCCC-EEEETTSCEEEEEEEEEESCCE-EEEEETTEECCC-SSSEEEEECTTCEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEccCCc-EEEeCCCeEEEEEEEEEecCCE-EEEEECCEECCC-CCcEEEEECCCCeEEEEECCCChhcCEEEEEE
Confidence 45555554444 3489999999999999999998 999999874432 2333332 223456799999999999999999
Q ss_pred EEcCCccceecEEEEEEcCc
Q psy3823 301 ARNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 301 a~n~~g~~~~~~~l~v~~~~ 320 (365)
|.|..|.....+.|.|...+
T Consensus 117 a~N~~G~~~~~~~l~V~~~p 136 (154)
T 1fhg_A 117 AVNSLGEATCTAELLVETMG 136 (154)
T ss_dssp EEETTEEEEEEEEEEEECC-
T ss_pred EEECCCeEEEEEEEEEeCcC
Confidence 99999999998999887654
No 446
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.36 E-value=3.2e-12 Score=95.13 Aligned_cols=86 Identities=16% Similarity=0.154 Sum_probs=69.5
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCC-CCceeEe-cCCeEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPR-PLTSYSI-QDGSTSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~-~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
..+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +.. ....... ......+|.|.+++.+|+|.|+|.|.|..|
T Consensus 20 ~~p~~~~v~~G~~v~L~C~~~g~p~p-~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G 97 (116)
T 2kkq_A 20 YKPQSKKVLEGDSVKLECQISAIPPP-KLFWKRNNEM-VQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAG 97 (116)
T ss_dssp SCCCCEEEETTEEEEEEEEBCCBSCC-EEEEEETTEE-CCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTE
T ss_pred eCCCcEEEeCCCcEEEEEEEeccCCC-EEEEEECCEE-CcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCC
Confidence 34556788999999999998899999 9999999987 653 2232222 223445899999999999999999999999
Q ss_pred CCcccEEEEE
Q psy3823 95 NQRTPCTFHV 104 (365)
Q Consensus 95 ~~~~~~~l~V 104 (365)
.....+.|.|
T Consensus 98 ~~~~~~~l~V 107 (116)
T 2kkq_A 98 VTTCNTRLDV 107 (116)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEEEEE
Confidence 8888888888
No 447
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=3.2e-12 Score=95.44 Aligned_cols=94 Identities=16% Similarity=0.262 Sum_probs=74.0
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+...+.. ..+..|+.+.|.|.+.|.|.+. +.|+++|..............++ .|.|.+++.+|+|.|+|.|
T Consensus 7 ~pP~i~~~p~~-~~v~~G~~v~l~C~~~g~p~p~-i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a 81 (118)
T 2eo9_A 7 GPPVIRQGPVN-QTVAVDGTFVLSCVATGSPVPT-ILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIA 81 (118)
T ss_dssp CSCCCSBCCCC-EEEETTCEEEEECBCCCSSCCE-EEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEE
T ss_pred CCCEEEcCCCC-EEEcCCCeEEEEEEEEecCCCE-EEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEE
Confidence 45666544434 3388999999999999999998 99999987654434444444444 5999999999999999999
Q ss_pred EcCCccceecEEEEEEcCc
Q psy3823 302 RNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~~~~ 320 (365)
.|..|.....+.|.|...+
T Consensus 82 ~n~~g~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 82 STPSGEATWSAYIEVQEFG 100 (118)
T ss_dssp ECSSCEEEEECCEEEECCS
T ss_pred EcCCCcEEEEEEEEEEeCC
Confidence 9999999888888887554
No 448
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.36 E-value=6.2e-12 Score=90.88 Aligned_cols=88 Identities=10% Similarity=0.124 Sum_probs=69.0
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEE
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 89 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 89 (365)
.+|.+.......+.+.+|+.+.|.|.+. .|.+ .+.|++++.. +..........++....|.|.+++.+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~-~v~W~k~g~~-i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKL-EVKWYKNGQE-IRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTS-CEEEEESSCB-CCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCc-eEEEEECCEE-CCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE
Confidence 3566655444446788999999999987 6888 9999999988 76555544445556668999999999999999998
Q ss_pred EeCCCCCcccEEEEE
Q psy3823 90 RNEQGNQRTPCTFHV 104 (365)
Q Consensus 90 ~~~~~~~~~~~~l~V 104 (365)
+.....+.|.|
T Consensus 83 ----g~~~~~~~l~V 93 (100)
T 2yuv_A 83 ----GDEKCSTELFV 93 (100)
T ss_dssp ----TTEEEEEEEEE
T ss_pred ----CCceEEEEEEE
Confidence 45557788888
No 449
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=4.3e-12 Score=93.43 Aligned_cols=91 Identities=18% Similarity=0.193 Sum_probs=71.0
Q ss_pred CCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCC-CceeEe-cCCeEEEEEEccCCCCCCeEEEEE
Q psy3823 11 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRP-LTSYSI-QDGSTSVARYTPTSELEYGTLLCW 88 (365)
Q Consensus 11 ~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~-~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~ 88 (365)
+|.+. ..+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +... ...... .......|.|.+++.+|.|.|+|.
T Consensus 8 ~P~~~-~~~~~~~v~~G~~v~l~C~~~g~p~p-~v~W~k~g~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm2_A 8 APFFE-MKLKHYKIFEGMPVTFTCRVAGNPKP-KIYWFKDGKQ-ISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIM 84 (110)
T ss_dssp CCCBS-SCCCCEEEETTCCEEEEEEBCCSSCC-EEEEECSSCB-CCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEE
T ss_pred CCEEE-ecCcCeEEeCCCeEEEEEEEEecCCC-EEEEEECCEE-CCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEE
Confidence 44443 33456678999999999998899999 9999999988 6542 332222 223345799999999999999999
Q ss_pred EEeCCCCCcccEEEEE
Q psy3823 89 ARNEQGNQRTPCTFHV 104 (365)
Q Consensus 89 a~~~~~~~~~~~~l~V 104 (365)
|.|..|.....+.|.|
T Consensus 85 a~N~~g~~~~~~~l~V 100 (110)
T 2dm2_A 85 AANPQGRISCTGRLMV 100 (110)
T ss_dssp EECTTCCEEECCCEEE
T ss_pred EEECCCeEEEEEEEEE
Confidence 9999998888888888
No 450
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.35 E-value=3.5e-12 Score=92.02 Aligned_cols=86 Identities=12% Similarity=0.120 Sum_probs=69.4
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCC--CceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRP--LTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
..+....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +... .......+.....|.|.+++.+|.|.|+|.|.|..+
T Consensus 10 ~~~~~~~~~~G~~~~l~C~~~g~p~p-~v~W~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 87 (100)
T 3irg_A 10 ALPSDISIDEGKVLTVACAFTGEPTP-EVTWSCGGRK-IHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFG 87 (100)
T ss_dssp CCCSEEEEETTSEEEEEEEEEEESCC-EEEEEETTEE-CCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred cCCCcEEEcCCCcEEEEEEEEEcCCC-ceEEEECCEE-eecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCC
Confidence 34556788999999999998889999 9999999987 6432 222333444556899999999999999999999998
Q ss_pred CCcccEEEEE
Q psy3823 95 NQRTPCTFHV 104 (365)
Q Consensus 95 ~~~~~~~l~V 104 (365)
.....+.|.|
T Consensus 88 ~~~~~~~l~V 97 (100)
T 3irg_A 88 SDSATVNIHI 97 (100)
T ss_dssp EEEEEEEEEE
T ss_pred cEEEEEEEEE
Confidence 8777788877
No 451
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.35 E-value=7.2e-12 Score=88.60 Aligned_cols=87 Identities=17% Similarity=0.219 Sum_probs=64.4
Q ss_pred CCCceecCccc-eeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEE
Q psy3823 222 DEPVCKQSQQR-IYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCW 300 (365)
Q Consensus 222 ~~p~~~~~~~~-~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~ 300 (365)
.+|.+..+... ...+..|+.+.|.|.+.+ |.+. +.|+++|.... ...+..+..++..+.|.|.+++.+|+|.|+|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~-v~W~k~g~~i~-~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~ 79 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAP-VRWYKDGQEVE-ESDFVVLENEGPHRRLVLPATQPSDGGEFQCV 79 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSC-CEEEETTSCCC-CCSSCEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcE-EEEEECCEEee-eeeeeeEEecCCeEEEEeCCCChhhcEEEEEE
Confidence 45555544432 233568999999999865 8887 99999987543 44556666777888899999999999999999
Q ss_pred EEcCCccceecEEEE
Q psy3823 301 ARNEQGSQRTPCTFH 315 (365)
Q Consensus 301 a~n~~g~~~~~~~l~ 315 (365)
|.|. +.++.|.
T Consensus 80 a~n~----~~~~~lt 90 (91)
T 2lvc_A 80 AGDE----CAYFTVT 90 (91)
T ss_dssp CSSC----EEEEEEE
T ss_pred Ecce----EEEEEEE
Confidence 9664 4455554
No 452
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.34 E-value=3.2e-12 Score=92.94 Aligned_cols=91 Identities=14% Similarity=0.213 Sum_probs=69.5
Q ss_pred cccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeE----ec-CCeEEEEEEccCCCCCC
Q psy3823 8 STDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYS----IQ-DGSTSVARYTPTSELEY 82 (365)
Q Consensus 8 ~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~----~~-~~~~~~l~i~~~~~~d~ 82 (365)
+.++|....... ...|+.+.|.|.+.++|.+ .++|++++.. +........ .. ....+.|.|.+++.+|+
T Consensus 1 V~~pP~i~~~~~----~~~~~~~~~~c~v~G~P~P-~i~W~k~g~~-l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 74 (103)
T 1wwb_X 1 VHFAPTITFLES----PTSDHHWCIPFTVKGNPKP-ALQWFYNGAI-LNESKYICTKIHVTNHTEYHGCLQLDNPTHMNN 74 (103)
T ss_dssp CCCCCCCCCCCC----CCCCCEEEEEEEEECSSCC-EEEEEETTEE-ECCCSSEEEEEEEECSSEEEEEEEEESCCGGGC
T ss_pred CCCCCEEEeccC----ceECcEEEEEEEEEEeCCC-EEEEEECCEE-CCCCCcEeEEEEecCCcEEEEEEEECCCCcccC
Confidence 356666432211 2468899999999999999 9999999988 665543211 11 12345699999999999
Q ss_pred eEEEEEEEeCCCCCcccEEEEE
Q psy3823 83 GTLLCWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 83 G~Y~C~a~~~~~~~~~~~~l~V 104 (365)
|.|+|.|.|..|....++.|.|
T Consensus 75 G~Y~C~A~N~~G~~~~~~~l~V 96 (103)
T 1wwb_X 75 GDYTLIAKNEYGKDEKQISAHF 96 (103)
T ss_dssp EEEEEEEECSSCEEEEEEEECC
T ss_pred EEEEEEEEeCCCcEeEEEEEEE
Confidence 9999999999999888899988
No 453
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.34 E-value=1.4e-11 Score=98.69 Aligned_cols=157 Identities=11% Similarity=0.065 Sum_probs=100.1
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEe-CCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTH-NGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDL 208 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~-~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l 208 (365)
..+.+|+++.|+|.+.. +.+..+.|.. .++....... .....|.|.+++. | |.|.|.+.. .+....+.++|
T Consensus 9 ~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~~----~~~~~l~l~~vs~-~-g~y~C~~~c-~~~~~~~~~~l 80 (185)
T 1iam_A 9 VILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPG----NNRKVYELSNVQE-D-SQPMCYSNC-PDGQSTAKTFL 80 (185)
T ss_dssp EEEETTEEEEEEEEECS-SSCSEEEEECSSCEEEECSSS----SSEEEEEEEEECS-C-BCCEEEEEC-SSCEEEEECEE
T ss_pred cEEeCCCCEEEEEEccC-CCCccceEEeeCCCccEeccC----CceeEEEEEecCc-C-CEEEEEEEC-CCCceEEEEEE
Confidence 35889999999999964 5555467763 1222110010 1124688999974 3 999999854 44455577888
Q ss_pred EEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeee-CCCc-eeEEEeCCCCCCCCCCceeEeeCCCEEEEEE
Q psy3823 209 NINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDAN-PQAQ-YFTWAFNNSDTAPRPLTSYSIQDGSTSVARY 286 (365)
Q Consensus 209 ~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i 286 (365)
+|. .+|...........+.+|+.++|.|.+.+. |.+. .|.|++++...... ..........|.+
T Consensus 81 ~V~----------~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~----~~~~~~~~~tl~~ 146 (185)
T 1iam_A 81 TVY----------WTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKRE----PAVGEPAEVTTTV 146 (185)
T ss_dssp EEE----------BCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEE----ECCTTTEEEEEEE
T ss_pred EEe----------CCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccc----cCCCccccEEEEE
Confidence 988 666654333222228899999999999885 5443 48999976532110 0011122335777
Q ss_pred cCCCcccCeEEEEEEEcCCccc
Q psy3823 287 TPTSELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 287 ~~v~~~d~G~Y~C~a~n~~g~~ 308 (365)
.....+|...|+|.|.|..+..
T Consensus 147 ~~~reD~g~~~sC~A~~~l~~~ 168 (185)
T 1iam_A 147 LVRRDHHGAQFSCRTELDLRPQ 168 (185)
T ss_dssp ECCSSCSSCEEEEEEEEECGGG
T ss_pred eceeccCCCeEEEEEEecCccc
Confidence 7666666669999999998844
No 454
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.34 E-value=6.4e-12 Score=108.09 Aligned_cols=167 Identities=14% Similarity=0.140 Sum_probs=101.2
Q ss_pred eEEEEecCCcEEEEEEeCC--CCCcceEEEEeCCCcC-C-------CCC----------CceeEe--cCCeEEEEEEccC
Q psy3823 20 RIYGALRNEQVLVSCTVDA--NPQAQYFTWAFNNSGT-A-------PRP----------LTSYSI--QDGSTSVARYTPT 77 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~--~p~~~~v~W~~~~~~~-l-------~~~----------~~~~~~--~~~~~~~l~i~~~ 77 (365)
....+.+|++++|.|...+ .... .+.|||..... . ... .+.... .......|.|.++
T Consensus 31 ~~~~~~~G~~v~L~C~~s~~~~~~~-~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 109 (267)
T 3u1s_H 31 GAEVKKPGSSVKVSCKASGNSFSNH-DVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGL 109 (267)
T ss_dssp CCEEECTTCCEEEEEEEGGGGGGTS-EEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSC
T ss_pred CCEEEeCCCcEEEEEEeeCCccCCC-EEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCC
Confidence 3467899999999999543 2334 89999853210 0 000 111111 1224457999999
Q ss_pred CCCCCeEEEEEEEe-------CC------------C-C-----CcccEEEEEEeccccCCCCCCCeEEEEcCCccCccce
Q psy3823 78 SELEYGTLLCWARN-------EQ------------G-N-----QRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVL 132 (365)
Q Consensus 78 ~~~d~G~Y~C~a~~-------~~------------~-~-----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 132 (365)
+.+|+|.|.|.+.+ .. . . ......|+|.. .+..+|.+...... ...
T Consensus 110 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~-----~~~~~P~v~~~~~~----~~~ 180 (267)
T 3u1s_H 110 TADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSS-----ASTKGPSVFPLAPS----SKS 180 (267)
T ss_dssp CGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECC-----CCCBCCEEEEECCC----GGG
T ss_pred ChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecC-----CCCCCCEEEEecCC----ccc
Confidence 99999999999861 11 0 0 11235666621 11345665533321 234
Q ss_pred ecCCcEEEEEEEEe-cCCCCeeEEEeCCeEEeeC--------CCCceEEeeceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 133 NEGVDIYFDCHIQA-NPPYKKLIWTHNGITISNN--------ASAGRIITNQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 133 ~~g~~v~l~C~~~~-~p~~~~i~W~~~~~~l~~~--------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
.+|+.++|.|.+.+ +|.+..+.| ++..+... ...+.......|.|.....+| +.|+|.+.|..+
T Consensus 181 ~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~ 253 (267)
T 3u1s_H 181 TSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 253 (267)
T ss_dssp EETTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGG
T ss_pred CCCCcEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCC
Confidence 67999999999997 454556999 55443210 111122223568888888888 999999998765
No 455
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=1.9e-12 Score=95.39 Aligned_cols=93 Identities=14% Similarity=0.223 Sum_probs=74.0
Q ss_pred ccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCcee-EecCCeEEEEEEccCCCCCCeEEEE
Q psy3823 9 TDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSY-SIQDGSTSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 9 ~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C 87 (365)
.++|.+.. .+....+.+|+.++|.|.+.+.|.+ .+.|++++.. +....... .........|.|.+++.+|.|.|+|
T Consensus 7 ~~~P~i~~-~~~~~~v~~G~~v~l~C~~~g~p~p-~v~W~~~g~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 83 (110)
T 2dm3_A 7 GFRPHFLQ-APGDLTVQEGKLCRMDCKVSGLPTP-DLSWQLDGKP-VRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTC 83 (110)
T ss_dssp CCCCEEEE-CCCEEEEESSSCBCCEEEEECSSCC-EEECBBSSSB-CCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCE
T ss_pred CCCCcEEe-CCCcEEEeCCCEEEEEEEEEEcCCC-EEEEEECCEE-CCCCCceEEEEecCCeEEEEEeeCCcccCEEEEE
Confidence 35666544 3456778999999999998889999 9999999988 65544332 2233334589999999999999999
Q ss_pred EEEeCCCCCcccEEEEE
Q psy3823 88 WARNEQGNQRTPCTFHV 104 (365)
Q Consensus 88 ~a~~~~~~~~~~~~l~V 104 (365)
.|.|..+.....+.|.|
T Consensus 84 ~a~n~~g~~~~~~~l~V 100 (110)
T 2dm3_A 84 IATNRAGQNSFSLELVV 100 (110)
T ss_dssp EEECSSCEEEECCEEEE
T ss_pred EEECCCCEEEEEEEEEE
Confidence 99999998888888888
No 456
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.34 E-value=1.3e-12 Score=97.57 Aligned_cols=88 Identities=9% Similarity=-0.037 Sum_probs=64.9
Q ss_pred CCceEEEEecCCcEEEEEEeCCC---CCcceEEEEeCCCcCCC--CCCceeEe------cCCeEEEEEEccCCCCCCeEE
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDAN---PQAQYFTWAFNNSGTAP--RPLTSYSI------QDGSTSVARYTPTSELEYGTL 85 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~---p~~~~v~W~~~~~~~l~--~~~~~~~~------~~~~~~~l~i~~~~~~d~G~Y 85 (365)
.++....+.+|++++|.|...+. |.+ .|.|||+....+. ........ .......|.|.+++..|+|.|
T Consensus 12 ~~P~~v~V~eG~~v~L~C~v~g~~~~p~P-~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y 90 (126)
T 2dav_A 12 EKPQGGTVKVGEDITFIAKVKAEDLLRKP-TIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNY 90 (126)
T ss_dssp SCCCCCEEETTCCEEEEEEEECCCSSSCC-EEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEE
T ss_pred EcCCCeEEeCCCCEEEEEEEeccCCCCCC-cEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEE
Confidence 34567778999999999996553 888 9999997522011 11221111 111346899999999999999
Q ss_pred EEEEEeCCCCCcccEEEEEE
Q psy3823 86 LCWARNEQGNQRTPCTFHVV 105 (365)
Q Consensus 86 ~C~a~~~~~~~~~~~~l~V~ 105 (365)
+|+|.|..+..+..+.|+|.
T Consensus 91 ~Cevsn~~g~~~~~~~L~V~ 110 (126)
T 2dav_A 91 RCEVTYKDKFDSCSFDLEVH 110 (126)
T ss_dssp EEEEECSSCEEEECCEEEEE
T ss_pred EEEEEeCCCcEEEEEEEEEE
Confidence 99999999888899999993
No 457
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=1.2e-12 Score=94.52 Aligned_cols=91 Identities=15% Similarity=0.276 Sum_probs=70.6
Q ss_pred cccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEE
Q psy3823 8 STDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 8 ~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 87 (365)
+..+|.+... +....+.+|+.+.|.|.+.+.|.+ .+.|++++.. +....... ......|.|.+++.+|+|.|+|
T Consensus 8 ~~~~P~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p-~v~W~~~g~~-~~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C 81 (99)
T 2yr3_A 8 MEVAPSFSSV-LKDCAVIEGQDFVLQCSVRGTPVP-RITWLLNGQP-IQYARSTC---EAGVAELHIQDALPEDHGTYTC 81 (99)
T ss_dssp CCEEEEEEEC-CCCEEECTTCCEEEECEEEEESCC-CCEEEESSSB-CSSCCCEE---ETTEEEEEECSCCTTCCBCEEE
T ss_pred cccCCceeec-CCCCEEeCCCeEEEEEEEeeeCCC-eEEEEECCEE-CcccceEe---eCCeEEEEECCCChhhCEEEEE
Confidence 4455655443 445678999999999998889999 9999999988 66444322 1224589999999999999999
Q ss_pred EEEeCCCCCcccEEEEE
Q psy3823 88 WARNEQGNQRTPCTFHV 104 (365)
Q Consensus 88 ~a~~~~~~~~~~~~l~V 104 (365)
.|.|..|.....+.|.|
T Consensus 82 ~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 82 LAENALGQVSCSAWVTV 98 (99)
T ss_dssp EEECSSCEEEEECCEEE
T ss_pred EEEECCCeEEEEEEEEE
Confidence 99999988776666665
No 458
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.34 E-value=5.1e-12 Score=94.33 Aligned_cols=77 Identities=16% Similarity=0.245 Sum_probs=64.0
Q ss_pred cCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeE--ec-----CCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcc
Q psy3823 26 RNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYS--IQ-----DGSTSVARYTPTSELEYGTLLCWARNEQGNQRT 98 (365)
Q Consensus 26 ~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~--~~-----~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~ 98 (365)
.+..+.|.|.+.|+|.| .++|+|||.. +........ .. ......|.|.+++..|+|.|+|.|.|..|....
T Consensus 14 ~~~~~~l~c~v~G~P~P-~I~W~knG~~-l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAP-SLRWLFNGSV-LNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCEEEEEEEECCSSCC-EEEEEETTEE-CCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred cCccEEEEEEEeeeCCC-eEEEEECCEE-CCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEE
Confidence 67889999999999999 9999999998 766544221 11 123468999999999999999999999999888
Q ss_pred cEEEEE
Q psy3823 99 PCTFHV 104 (365)
Q Consensus 99 ~~~l~V 104 (365)
++.|.|
T Consensus 92 t~~l~v 97 (126)
T 1he7_A 92 SIMAAF 97 (126)
T ss_dssp EEEECC
T ss_pred EEEEEE
Confidence 888887
No 459
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.34 E-value=1.3e-12 Score=94.51 Aligned_cols=83 Identities=16% Similarity=0.194 Sum_probs=63.2
Q ss_pred eeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecE
Q psy3823 233 IYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPC 312 (365)
Q Consensus 233 ~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 312 (365)
...+..|+.+.|.|.+.|.|.+. +.|+++|....................|.|.+++.+|+|.|+|.|.|..|..+..+
T Consensus 17 ~~~v~~G~~v~l~C~~~g~p~p~-v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 95 (100)
T 3caf_A 17 LHAVPAANTVKFRCPAGGNPMPT-MRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 95 (100)
T ss_dssp EEEECTTCCEEEECCEEEESCCE-EEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred EEEecCCCEEEEEEEccccCCCE-EEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEE
Confidence 34488999999999999999998 99999886443221111111111223599999999999999999999999988888
Q ss_pred EEEE
Q psy3823 313 TFHV 316 (365)
Q Consensus 313 ~l~v 316 (365)
.|.|
T Consensus 96 ~l~V 99 (100)
T 3caf_A 96 HLDV 99 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8876
No 460
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.33 E-value=5e-12 Score=89.93 Aligned_cols=80 Identities=13% Similarity=0.112 Sum_probs=63.3
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
......+.+|+.++|.|.+.+ |.+ .++|+|++.. +..........++...+|.|.+++.+|+|.|+|.|.|. .
T Consensus 11 ~~~~~~v~~G~~v~l~C~v~~-~~~-~v~W~k~g~~-i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~----~ 83 (93)
T 1waa_A 11 PLYGVEVFVGETAHFEIELSE-PDV-HGQWKLKGQP-LAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT----K 83 (93)
T ss_dssp CCCCEEEETTSCEEEEEEESS-SSC-CCEEEETTEE-CCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE----E
T ss_pred cCcceEEeCCCCEEEEEEECC-CCC-eEEEEECCEE-CcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC----c
Confidence 344567899999999999865 567 8999999998 76655545555566678999999999999999999763 3
Q ss_pred ccEEEEE
Q psy3823 98 TPCTFHV 104 (365)
Q Consensus 98 ~~~~l~V 104 (365)
.+..|.|
T Consensus 84 ~sa~L~V 90 (93)
T 1waa_A 84 SAANLKV 90 (93)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5666666
No 461
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.33 E-value=5.3e-12 Score=90.30 Aligned_cols=82 Identities=9% Similarity=0.127 Sum_probs=66.2
Q ss_pred eCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy3823 16 QSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGN 95 (365)
Q Consensus 16 ~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~ 95 (365)
...+....+.+|+.+.|.|.+.+.| + .+.|++++.. +........ .++ .|.|.+++.+|+|.|+|.|.|..|.
T Consensus 13 ~~~~~~~~v~~G~~v~l~C~~~g~p-p-~i~W~k~g~~-~~~~~~~~~-~~~---~L~i~~~~~~D~G~Y~C~a~n~~g~ 85 (95)
T 2ckn_A 13 PVEVESLLVHPGDLLQLRCRLRDDV-Q-SINWLRDGVQ-LVESNRTRI-TGE---EVEVRDSIPADSGLYACVTSSPSGS 85 (95)
T ss_dssp TTBBCCEEECTTSCEEEECCEESSC-C-EEEEEBTTBC-CCCCSSEEE-CSS---EEEESSCCGGGSEEEEEEEEETTEE
T ss_pred EcCcceEEEcCCCeEEEEEECCCCC-C-ceEEEECCEe-cCCCCCEEE-eCC---EEEECCCChHHCEEEEEEeccCCCc
Confidence 3445667889999999999987777 7 9999999987 654443222 333 8999999999999999999999888
Q ss_pred CcccEEEEE
Q psy3823 96 QRTPCTFHV 104 (365)
Q Consensus 96 ~~~~~~l~V 104 (365)
....+.|.|
T Consensus 86 ~~~~~~l~V 94 (95)
T 2ckn_A 86 DTTYFSVNV 94 (95)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 777777776
No 462
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.32 E-value=7.4e-11 Score=105.29 Aligned_cols=172 Identities=17% Similarity=0.239 Sum_probs=105.8
Q ss_pred cceecCCcEEEEEEEEecCC-------------CCeeEEEe--CCe--EE-ee-CC--------CCc-------------
Q psy3823 130 SVLNEGVDIYFDCHIQANPP-------------YKKLIWTH--NGI--TI-SN-NA--------SAG------------- 169 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~-------------~~~i~W~~--~~~--~l-~~-~~--------~~~------------- 169 (365)
..+.+|++++|.|.....+. ...+.||+ .|. .+ .. .. ..+
T Consensus 168 v~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~~~~~ 247 (401)
T 3f8u_B 168 PRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDDDEPW 247 (401)
T ss_dssp CEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESCCCSS
T ss_pred EEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecccccc
Confidence 46789999999999875431 34589996 332 11 11 10 001
Q ss_pred -eEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEEEeeeeecccccCCCCceecCccceeeeecCc-eEEEEEE
Q psy3823 170 -RIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNE-QVLVSCT 247 (365)
Q Consensus 170 -~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~-~~~l~C~ 247 (365)
....+.+|.|.+++..|+|.|.|.+.+..+... ..+.|.|. .+|.+.........+..|+ .++|.|.
T Consensus 248 g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~-~~v~L~V~----------~pP~V~v~p~~~~~~~~G~~~vtL~C~ 316 (401)
T 3f8u_B 248 GPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQ-VTLELAVY----------KPPKVSLMPATLARAAPGEAPPELLCL 316 (401)
T ss_dssp CCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEE-EEEEEEEE----------BCCEEEEESSSCCCCCTTCCCCCEEEE
T ss_pred cccCCcEEEEECcCCHhhCceEEEEEEeccccee-EEEEEeec----------cCCeEeeccCcceeecCCCccEEEEEE
Confidence 112367899999999999999999998766443 56778888 7777654332221134676 7999999
Q ss_pred Eeee-CC--CceeEEE-eCCC-CCCCCCC------ceeEeeCCCE---EEEEEcCCCccc-CeEEEEEEEcCC---ccce
Q psy3823 248 VDAN-PQ--AQYFTWA-FNNS-DTAPRPL------TSYSIQDGST---SVARYTPTSELE-YGTLLCWARNEQ---GSQR 309 (365)
Q Consensus 248 ~~~~-p~--~~~~~W~-~~~~-~~~~~~~------~~~~~~~~~~---s~l~i~~v~~~d-~G~Y~C~a~n~~---g~~~ 309 (365)
+.++ |. +. +.|. +++. ....... ......++.. +.|.+...+.++ .+.|+|.+.|.. |..+
T Consensus 317 a~GfyP~~~~~-VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~sL~~g~rs 395 (401)
T 3f8u_B 317 VSHFYPSGGLE-VEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSLPASGRS 395 (401)
T ss_dssp EEEEBSSTTCE-EEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTTSCTTCEE
T ss_pred ecCCcCCCCcE-EEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCCCCCCcce
Confidence 9986 54 45 9995 7652 1111111 1112334443 346665554334 459999999976 4444
Q ss_pred ecEE
Q psy3823 310 TPCT 313 (365)
Q Consensus 310 ~~~~ 313 (365)
.+++
T Consensus 396 ~sVt 399 (401)
T 3f8u_B 396 AEVT 399 (401)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 463
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.32 E-value=2e-11 Score=86.83 Aligned_cols=89 Identities=12% Similarity=0.135 Sum_probs=66.8
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+....... .+.+|+.+.|.|.+.+ +++. +.|+++|.... ...+..+..++..+.|.|.+++.+|+|.|+|.|
T Consensus 4 ~~~~~~~~~~~~-~v~~G~~v~l~C~v~~-~~~~-v~W~k~g~~i~-~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a 79 (93)
T 1waa_A 4 ALIEVEKPLYGV-EVFVGETAHFEIELSE-PDVH-GQWKLKGQPLA-ASPDCEIIEDGKKHILILHNCQLGMTGEVSFQA 79 (93)
T ss_dssp CCCCEEECCCCE-EEETTSCEEEEEEESS-SSCC-CEEEETTEECC-CBTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCcEeeccCcce-EEeCCCCEEEEEEECC-CCCe-EEEEECCEECc-CCCCEEEEEECCEEEEEECCCChhhCEEEEEEE
Confidence 345555544443 3899999999999975 5577 99999987543 334556666777788999999999999999999
Q ss_pred EcCCccceecEEEEEEc
Q psy3823 302 RNEQGSQRTPCTFHVVK 318 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~~ 318 (365)
.|. ..+..|.|..
T Consensus 80 ~n~----~~sa~L~V~~ 92 (93)
T 1waa_A 80 ANT----KSAANLKVKE 92 (93)
T ss_dssp TTE----EEEEEEEEEC
T ss_pred CCC----cEEEEEEEEc
Confidence 884 3456676653
No 464
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.32 E-value=5.1e-12 Score=87.89 Aligned_cols=78 Identities=15% Similarity=0.150 Sum_probs=62.2
Q ss_pred eeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecEE
Q psy3823 234 YGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPCT 313 (365)
Q Consensus 234 ~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 313 (365)
+.+.+|+.+.|.|.+.+ |.|. +.|+++|.... ......+..++..+.|.|.+++.+|+|.|+|.|.| .+.++.
T Consensus 6 v~~~~G~~v~l~C~vs~-p~p~-v~W~k~g~~l~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~ 78 (84)
T 2lu7_A 6 VRSTPGGDLELVVHLSG-PGGP-VRWYKDGERLA-SQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIFL 78 (84)
T ss_dssp EEECTTSCEEEECCCSC-CSTT-CEEEETTEECC-CCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEEE
T ss_pred EEEecCCCEEEEEEECC-CCcE-EEEEECCEEcc-ccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEEE
Confidence 34889999999999865 8888 99999987543 34556666677778899999999999999999844 556677
Q ss_pred EEEEc
Q psy3823 314 FHVVK 318 (365)
Q Consensus 314 l~v~~ 318 (365)
|.|..
T Consensus 79 l~V~e 83 (84)
T 2lu7_A 79 VSVEE 83 (84)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 77753
No 465
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=3.7e-12 Score=92.78 Aligned_cols=91 Identities=10% Similarity=0.166 Sum_probs=68.0
Q ss_pred ccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEE
Q psy3823 9 TDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCW 88 (365)
Q Consensus 9 ~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 88 (365)
...|..+........+.+|+.++|.|.+.+.|.+..+.|+|++.. +..........++...+|.|.+++.+|+|.|+|.
T Consensus 5 ~~~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~-i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 83 (104)
T 2eny_A 5 SSGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKT-VGSSSRFQATRQGRKYILVVREAAPSDAGEVVFS 83 (104)
T ss_dssp CCCCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSB-CSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEE
T ss_pred ccCCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEE-CCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEE
Confidence 344444444556678899999999999777664327999999998 7655554444556667899999999999999998
Q ss_pred EEeCCCCCcccEEEEE
Q psy3823 89 ARNEQGNQRTPCTFHV 104 (365)
Q Consensus 89 a~~~~~~~~~~~~l~V 104 (365)
|.+ ...+..|.|
T Consensus 84 a~~----~~~~a~L~V 95 (104)
T 2eny_A 84 VRG----LTSKASLIV 95 (104)
T ss_dssp ETT----EEEEECEEE
T ss_pred ECC----eeEEEEEEE
Confidence 753 346677777
No 466
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.31 E-value=1.1e-11 Score=91.00 Aligned_cols=93 Identities=9% Similarity=-0.059 Sum_probs=65.7
Q ss_pred CCceecCccceeeeecCceEEEEEEEeeeCC---CceeEEEeCCCCCCCC--CCceeEe----e--CCCEEEEEEcCCCc
Q psy3823 223 EPVCKQSQQRIYGALRNEQVLVSCTVDANPQ---AQYFTWAFNNSDTAPR--PLTSYSI----Q--DGSTSVARYTPTSE 291 (365)
Q Consensus 223 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---~~~~~W~~~~~~~~~~--~~~~~~~----~--~~~~s~l~i~~v~~ 291 (365)
.|.+...+.. ..+..|+.++|.|.+.|.|. |. +.|++++...... .....+. . ......|.|.+++.
T Consensus 4 ~p~f~~~p~~-~~v~~G~~v~L~C~~~g~p~~~~p~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 81 (108)
T 3cx2_A 4 IGLFVMRPQD-GEVTVGGSITFSARVAGASLLKPPV-VKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQP 81 (108)
T ss_dssp CCSCSBCCCC-EEEETTCCEEEEEEEECC-CCSCCE-EEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCG
T ss_pred ccEEEeCCCc-EEEeCCCCEEEEEEECCCccCCCcE-EEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCC
Confidence 3444443333 33889999999999999988 87 9999976211100 1111111 0 11246799999999
Q ss_pred ccCeEEEEEEEcCCccceecEEEEEE
Q psy3823 292 LEYGTLLCWARNEQGSQRTPCTFHVV 317 (365)
Q Consensus 292 ~d~G~Y~C~a~n~~g~~~~~~~l~v~ 317 (365)
+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 82 ~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 82 AFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ccCEEEEEEEecCCCceEEEEEEEEe
Confidence 99999999999999999999999885
No 467
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.31 E-value=8.2e-12 Score=97.96 Aligned_cols=94 Identities=11% Similarity=0.142 Sum_probs=74.7
Q ss_pred cccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEe-cCCeEEEEEEccCCCCCCeEEE
Q psy3823 8 STDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSI-QDGSTSVARYTPTSELEYGTLL 86 (365)
Q Consensus 8 ~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~ 86 (365)
+..+|.+... +....+.+|+.++|.|.+.+.|.+ .+.|++++.. +......... .......|.|.+++..|.|.|+
T Consensus 38 v~~~P~~~~~-~~~~~v~~G~~v~L~C~~~g~P~p-~v~W~k~g~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 114 (154)
T 1fhg_A 38 PHVKPYFTKT-ILDMEVVEGSAARFDCKVEGYPDP-EVMWFKDDNP-VKESRHFQIDYDEEGNCSLTISEVCGDDDAKYT 114 (154)
T ss_dssp CCEEEEEEEC-CCCEEEETTSCEEEEEEEEEESCC-EEEEEETTEE-CCCSSSEEEEECTTCEEEEEESSCCGGGCEEEE
T ss_pred CCCCCeEEcc-CCcEEEeCCCeEEEEEEEEEecCC-EEEEEECCEE-CCCCCcEEEEECCCCeEEEEECCCChhcCEEEE
Confidence 4455665543 344678999999999998889999 9999999988 6655443332 2233468999999999999999
Q ss_pred EEEEeCCCCCcccEEEEE
Q psy3823 87 CWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 87 C~a~~~~~~~~~~~~l~V 104 (365)
|.|.|..|.....+.|.|
T Consensus 115 C~a~N~~G~~~~~~~l~V 132 (154)
T 1fhg_A 115 CKAVNSLGEATCTAELLV 132 (154)
T ss_dssp EEEEETTEEEEEEEEEEE
T ss_pred EEEEECCCeEEEEEEEEE
Confidence 999999998888888888
No 468
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.30 E-value=1.4e-11 Score=91.98 Aligned_cols=82 Identities=15% Similarity=0.234 Sum_probs=63.3
Q ss_pred ecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCcee-Eee---C--CCEEEEEEcCCCcccCeEEEEEEEcCCcccee
Q psy3823 237 LRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSY-SIQ---D--GSTSVARYTPTSELEYGTLLCWARNEQGSQRT 310 (365)
Q Consensus 237 ~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~-~~~---~--~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~ 310 (365)
..+..+.|.|.+.|.|.|. +.|+++|........... +.. + .....|.|.++..+|+|.|+|.|.|.+|....
T Consensus 13 ~~~~~~~l~c~v~G~P~P~-I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 13 VEMHHWCIPFSVDGQPAPS-LRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCCEEEEEEEECCSSCCE-EEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred ccCccEEEEEEEeeeCCCe-EEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEE
Confidence 3578899999999999998 999999875433222111 111 1 12457999999999999999999999999988
Q ss_pred cEEEEEEcC
Q psy3823 311 PCTFHVVKA 319 (365)
Q Consensus 311 ~~~l~v~~~ 319 (365)
++.|.|...
T Consensus 92 t~~l~v~~~ 100 (126)
T 1he7_A 92 SIMAAFMDN 100 (126)
T ss_dssp EEEECCCSC
T ss_pred EEEEEEEcC
Confidence 888877644
No 469
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.30 E-value=1.5e-11 Score=90.99 Aligned_cols=92 Identities=17% Similarity=0.218 Sum_probs=68.7
Q ss_pred EeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeE
Q psy3823 5 IFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGT 84 (365)
Q Consensus 5 ~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 84 (365)
.+.+...|......+....+.+|+++.|.|.+.+. + .++|+|++.. +..........++....|.|.+++.+|+|.
T Consensus 12 ~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p-~v~W~k~~~~-l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
T 2edh_A 12 MLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--A-PVEWWKGHET-LRDGDRHSLRQDGARCELQIRGLVAEDAGE 87 (113)
T ss_dssp CCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--C-CCEEEESSSB-CCCSSSEEEEEETTEEEEEECSCCSTTCEE
T ss_pred EEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--C-cEEEEECCEE-CCCCCcEEEEECCCEEEEEECCCChhhCEE
Confidence 34455554333333445678999999999998653 6 7999999998 765555444455566789999999999999
Q ss_pred EEEEEEeCCCCCcccEEEEE
Q psy3823 85 LLCWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 85 Y~C~a~~~~~~~~~~~~l~V 104 (365)
|+|.| +.....+.|.|
T Consensus 88 Y~C~a----~~~~~~~~l~V 103 (113)
T 2edh_A 88 YLCMC----GKERTSAMLTV 103 (113)
T ss_dssp EEEEE----TTEEEEEEEEE
T ss_pred EEEEe----CCCCEEEEEEE
Confidence 99999 45557788888
No 470
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=7e-12 Score=91.08 Aligned_cols=80 Identities=13% Similarity=0.201 Sum_probs=65.1
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
.+....+.+|+.++|.|.+.+ |.+ .+.|++++.. +..........++....|.|.+++.+|+|.|+|.|.| ..
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~-~~~-~v~W~k~g~~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~ 86 (103)
T 2edf_A 14 PLEDQWVAPGEDVELRCELSR-AGT-PVHWLKDRKA-IRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA----SK 86 (103)
T ss_dssp CCCCEEECTTSCEEECCEESS-SSC-CCCEEESSCB-CCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS----CE
T ss_pred cCCccEEcCCCCEEEEEEEeC-CCC-cEEEEECCEE-ccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc----CC
Confidence 344577899999999999876 788 9999999988 7655554444555567899999999999999999988 35
Q ss_pred ccEEEEE
Q psy3823 98 TPCTFHV 104 (365)
Q Consensus 98 ~~~~l~V 104 (365)
..+.|.|
T Consensus 87 ~~~~l~V 93 (103)
T 2edf_A 87 STASLHV 93 (103)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 7788888
No 471
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.30 E-value=7.4e-12 Score=91.00 Aligned_cols=88 Identities=13% Similarity=0.112 Sum_probs=67.1
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCC--ceeEecCCeEEEEEEccCCCCCCeEEEE
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPL--TSYSIQDGSTSVARYTPTSELEYGTLLC 87 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 87 (365)
.+|..+...+....+.+|+.++|.|.+.+ |.+ .+.|+|++.. +.... ......++....|.|.+++.+|+|.|+|
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~-~v~W~k~g~~-l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 81 (103)
T 1x44_A 5 SSGIMVTKQLEDTTAYCGERVELECEVSE-DDA-NVKWFKNGEE-IIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSV 81 (103)
T ss_dssp CSSCCCSBCCCCEEEETTEEEEEEEECSS-SSC-CCEEEETTEE-CCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEE
T ss_pred CCCceeeccCCCEEEECCCCEEEEEEecC-CCC-eEEEEECCEE-CCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEE
Confidence 34543444555677899999999999865 777 9999999988 66554 3244445556789999999999999999
Q ss_pred EEEeCCCCCcccEEEEE
Q psy3823 88 WARNEQGNQRTPCTFHV 104 (365)
Q Consensus 88 ~a~~~~~~~~~~~~l~V 104 (365)
.|.| ....+.|.|
T Consensus 82 ~a~n----~~~~~~l~V 94 (103)
T 1x44_A 82 MTTG----GQSSAKLSV 94 (103)
T ss_dssp EETT----EEEEEEEEE
T ss_pred EECC----CcEEEEEEE
Confidence 9976 346677777
No 472
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.29 E-value=1.6e-11 Score=89.32 Aligned_cols=88 Identities=10% Similarity=0.154 Sum_probs=66.2
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCC-CceeEecCCeEEEEEEccCCCCCCeEEEEE
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRP-LTSYSIQDGSTSVARYTPTSELEYGTLLCW 88 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 88 (365)
.+|.+....+....+.+|+.+.|.|.+ +.|.+ .++|++++.. +... .......++....|.|.+++.+|+|.|+|.
T Consensus 14 ~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~-~v~W~k~g~~-l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 90 (104)
T 1pd6_A 14 KSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDA-EVKWLKNGQE-IQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCV 90 (104)
T ss_dssp TTSSCSEECCSEEEEETTSCEEEEEEC-SSSSS-CCEEEESSSE-ECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEE
T ss_pred CCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCC-EEEEEECCEE-CCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEE
Confidence 345555545555788999999999998 68888 8999999998 6654 333334445566899999999999999999
Q ss_pred EEeCCCCCcccEEEEE
Q psy3823 89 ARNEQGNQRTPCTFHV 104 (365)
Q Consensus 89 a~~~~~~~~~~~~l~V 104 (365)
|. .......|.|
T Consensus 91 a~----~~~~~~~l~V 102 (104)
T 1pd6_A 91 VG----GEKCSTELFV 102 (104)
T ss_dssp ET----TEEECCEEEE
T ss_pred EC----CCcEEEEEEE
Confidence 83 2335555655
No 473
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.29 E-value=8.3e-12 Score=90.73 Aligned_cols=92 Identities=14% Similarity=0.176 Sum_probs=67.8
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCce--eEee---CCCEEEEEEcCCCcccCeE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTS--YSIQ---DGSTSVARYTPTSELEYGT 296 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~--~~~~---~~~~s~l~i~~v~~~d~G~ 296 (365)
++|.+..... ...++.+.|.|.+.|.|.|. +.|+++|...... ... .+.. ....+.|.|.+++.+|+|.
T Consensus 3 ~pP~i~~~~~----~~~~~~~~~~c~v~G~P~P~-i~W~k~g~~l~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 76 (103)
T 1wwb_X 3 FAPTITFLES----PTSDHHWCIPFTVKGNPKPA-LQWFYNGAILNES-KYICTKIHVTNHTEYHGCLQLDNPTHMNNGD 76 (103)
T ss_dssp CCCCCCCCCC----CCCCCEEEEEEEEECSSCCE-EEEEETTEEECCC-SSEEEEEEEECSSEEEEEEEEESCCGGGCEE
T ss_pred CCCEEEeccC----ceECcEEEEEEEEEEeCCCE-EEEEECCEECCCC-CcEeEEEEecCCcEEEEEEEECCCCcccCEE
Confidence 5666542221 34578899999999999998 9999998754332 221 1111 1123569999999999999
Q ss_pred EEEEEEcCCccceecEEEEEEcC
Q psy3823 297 LLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 297 Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
|+|.|.|..|..+.++.|.|...
T Consensus 77 Y~C~A~N~~G~~~~~~~l~V~~~ 99 (103)
T 1wwb_X 77 YTLIAKNEYGKDEKQISAHFMGW 99 (103)
T ss_dssp EEEEEECSSCEEEEEEEECCSCC
T ss_pred EEEEEEeCCCcEeEEEEEEECCC
Confidence 99999999999999888887644
No 474
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=4e-12 Score=92.09 Aligned_cols=80 Identities=13% Similarity=0.129 Sum_probs=62.7
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCC----ceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCC
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPL----TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQ 93 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~----~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~ 93 (365)
.+....+.+|+.+.|.|.+.+.| + .++|++++.. +.... +.....++....|.|.+++.+|+|.|+|.|.+
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~-~-~v~W~k~g~~-i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n-- 88 (101)
T 2edk_A 14 PLEDQQVFVGDRVEMAVEVSEEG-A-QVMWMKNGVE-LTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG-- 88 (101)
T ss_dssp CCCCEEEESSCCCBCCEEESCSS-C-CCEEEESSCB-CCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSS--
T ss_pred cCCceEEcCCCCEEEEEEEeCCC-C-EEEEEECCEE-CCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcC--
Confidence 44557789999999999988878 7 9999999988 65544 22444556667899999999999999999886
Q ss_pred CCCcccEEEEE
Q psy3823 94 GNQRTPCTFHV 104 (365)
Q Consensus 94 ~~~~~~~~l~V 104 (365)
......|.|
T Consensus 89 --~~~~~~l~V 97 (101)
T 2edk_A 89 --GQCEAELIV 97 (101)
T ss_dssp --CEECCBEEE
T ss_pred --CcEEEEEEE
Confidence 334556666
No 475
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.28 E-value=7.3e-12 Score=93.47 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=70.2
Q ss_pred EeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEe--c--CCeEEEEEEccCCCC
Q psy3823 5 IFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSI--Q--DGSTSVARYTPTSEL 80 (365)
Q Consensus 5 ~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~--~--~~~~~~l~i~~~~~~ 80 (365)
.+.+.++|......... ..+...|.|.+.++|.+ .++|++++.. +......... . ......|.|.+++.+
T Consensus 2 ~L~V~~pP~i~~~~~~~----~~~~~~l~C~~~g~P~p-~i~W~k~g~~-l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 75 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEEPE----LRLEHCIEFVVRGNPPP-TLHWLHNGQP-LRESKIIHVEYYQEGEISEGCLLFNKPTHY 75 (118)
T ss_dssp --CCCCCCCCCCCCCCC----CCCEEEEEEEEECSSCC-EEEEEETTEE-CCCSSSEEEEEEECSSEEEEEEEEESCCGG
T ss_pred EEEEecCCceeccCCCe----eccceEEEEEeeeeCCC-eEEEEECCEE-CCCCCceeEEEeccCccccEEEEECCCChh
Confidence 45677888765442222 22667899998899999 9999999988 6655433221 1 124558999999999
Q ss_pred CCeEEEEEEEeCCCCCcccEEEEE
Q psy3823 81 EYGTLLCWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 81 d~G~Y~C~a~~~~~~~~~~~~l~V 104 (365)
|+|.|+|.|.|..|.....+.|.|
T Consensus 76 d~G~Y~C~a~N~~G~~~~~~~l~v 99 (118)
T 1wwc_A 76 NNGNYTLIAKNPLGTANQTINGHF 99 (118)
T ss_dssp GCEEEEEEEEETTEEEEEEEEECC
T ss_pred cCEEEEEEEECCCCeEeeEEEEEE
Confidence 999999999999998888888887
No 476
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.28 E-value=1.8e-12 Score=93.72 Aligned_cols=90 Identities=16% Similarity=0.232 Sum_probs=68.7
Q ss_pred CCeEeeC---CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCce---eEecCCeEEEEEEccCCCCCCeE
Q psy3823 11 EPVCKQS---QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTS---YSIQDGSTSVARYTPTSELEYGT 84 (365)
Q Consensus 11 ~p~~~~~---~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~---~~~~~~~~~~l~i~~~~~~d~G~ 84 (365)
+|.+... .+..+.+.+|+.+.|.|.+.+.|.+ .+.|++++.. +...... ....+ ...|.|.+++.+|+|.
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p-~v~W~~~~~~-~~~~~~~~~~~~~~~--~~~L~i~~v~~~D~G~ 79 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMP-TMRWLKNGKE-FKQEHRIGGYKVRNQ--HWSLIMESVVPSDKGN 79 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCC-EEEEEETTEE-CCGGGSTTCCEEEGG--GTEEEECSCCGGGCEE
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCC-EEEEEECCEE-cccccccccEEEecC--eEEEEEccCCcCCCEE
Confidence 4555432 2467888999999999998888999 9999999987 5433221 11111 1379999999999999
Q ss_pred EEEEEEeCCCCCcccEEEEE
Q psy3823 85 LLCWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 85 Y~C~a~~~~~~~~~~~~l~V 104 (365)
|+|.|.|..|.....+.|.|
T Consensus 80 Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 80 YTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEeCCCEEEEEEEEEE
Confidence 99999999988777777776
No 477
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.28 E-value=7.3e-13 Score=99.62 Aligned_cols=104 Identities=16% Similarity=0.276 Sum_probs=77.6
Q ss_pred ccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCC-CCceeE--e--eC
Q psy3823 204 TPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPR-PLTSYS--I--QD 278 (365)
Q Consensus 204 ~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~-~~~~~~--~--~~ 278 (365)
..+.|.|. .+|.+.. . ....+..|+.+.|.|.+.+.|.|..+.|++++...... ..++.+ . .+
T Consensus 5 ~~~~l~V~----------~~P~i~~-~-~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~ 72 (122)
T 2cry_A 5 SSGTLTVN----------GPPIISS-T-QTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEE 72 (122)
T ss_dssp CCCCCCCC----------SSCCEEE-E-CCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETT
T ss_pred eEEEEEEe----------cCCCccC-C-CeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCC
Confidence 34556666 8888776 3 33348899999999999999988559999998754331 122322 1 12
Q ss_pred CCEEEEEEcCCCcccC-eEEEEEEEcCCccceecEEEEEEcC
Q psy3823 279 GSTSVARYTPTSELEY-GTLLCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 279 ~~~s~l~i~~v~~~d~-G~Y~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
+..+.|.|.+++.+|. |.|+|.|.|..|.....+.|.|...
T Consensus 73 ~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~~~ 114 (122)
T 2cry_A 73 GVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGS 114 (122)
T ss_dssp EEEEEEECTTCCHHHHHSCEEEEEECSSCEEEEEECCCCSCS
T ss_pred ceEEEEEEcCCChhhCCceEEEEEECCCCeEEEEEEEEECCC
Confidence 2266899999999998 9999999999999988888877643
No 478
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.28 E-value=1.4e-11 Score=92.41 Aligned_cols=92 Identities=16% Similarity=0.182 Sum_probs=66.2
Q ss_pred EEEEecCCcEEEEEEeCC--CCCcceEEEEeCCCcCCCC-----CCceeEecC---CeEEEEEEccCCCCCCeEEEEEEE
Q psy3823 21 IYGALRNEQVLVSCTVDA--NPQAQYFTWAFNNSGTAPR-----PLTSYSIQD---GSTSVARYTPTSELEYGTLLCWAR 90 (365)
Q Consensus 21 ~~~v~~G~~~~l~C~~~~--~p~~~~v~W~~~~~~~l~~-----~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~a~ 90 (365)
.+.+.+|+.++|.|.+.+ .|.+ .+.|++++.. +.. ......... ...+.|.|.+++.+|+|.|+|.|.
T Consensus 17 ~v~v~~G~~v~L~C~~~g~p~~~~-~i~W~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 94 (122)
T 3s35_X 17 GIELSVGEKLVLNCTARTELNVGI-DFNWEYPSSK-HQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 94 (122)
T ss_dssp CEEEEETCCEEEEEEEEECTTCCC-EEEEECSCTT-CCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CEEEecCCeEEEEEEEEcCCCCcE-EEEEECCCcc-cCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEc
Confidence 356789999999999766 4445 8999999875 431 111111111 244589999999999999999999
Q ss_pred eCCCCCcccEEEEEEeccccCCCCCCCeEEEEc
Q psy3823 91 NEQGNQRTPCTFHVVKAGECEHPVDKPSVQIKL 123 (365)
Q Consensus 91 ~~~~~~~~~~~l~V~~~~~~~~~~~~p~~~~~~ 123 (365)
|..|.....+.|.| ..+|.+.+.+
T Consensus 95 n~~g~~~~~~~l~V---------~~~p~i~~~p 118 (122)
T 3s35_X 95 SGLMTKKNSTFVRV---------HEKPFVAFGS 118 (122)
T ss_dssp CSSCEEEEEEEEEE---------EEEECC----
T ss_pred cCCCceEEEEEEEE---------eccCeEEeec
Confidence 99998888899999 5667665543
No 479
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.28 E-value=1.7e-11 Score=87.57 Aligned_cols=80 Identities=10% Similarity=0.136 Sum_probs=63.4
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
.+....+.+|+.+.|.|.+ +.|.+ .+.|++++.. +..........++....|.|.+++.+|+|.|+|.| +...
T Consensus 14 ~~~~~~v~~G~~v~l~C~~-~~p~~-~v~W~k~~~~-l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g~~~ 86 (95)
T 2k1m_A 14 KPRSVEVAAGSPAVFEAET-ERAGV-KVRWQRGGSD-ISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSK 86 (95)
T ss_dssp CCCCEEEETTSCEEEEEEC-SSSSC-CCEEECSSSE-ECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----TTEE
T ss_pred CCCcEEEeCCCcEEEEEEe-CCCCC-eEEEEECCEE-CCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----CCce
Confidence 3456778999999999999 77888 9999999988 66554444445555678999999999999999998 3444
Q ss_pred ccEEEEE
Q psy3823 98 TPCTFHV 104 (365)
Q Consensus 98 ~~~~l~V 104 (365)
..+.|.|
T Consensus 87 ~~~~l~V 93 (95)
T 2k1m_A 87 VKFDLKV 93 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5667766
No 480
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.27 E-value=2.2e-11 Score=87.06 Aligned_cols=87 Identities=9% Similarity=0.112 Sum_probs=65.6
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+...+.. ..+..|+.+.|.|.+.+.| +. +.|+++|..... ..+..+. ...|.|.+++.+|+|.|+|.|
T Consensus 8 ~pp~~~~~~~~-~~v~~G~~v~l~C~~~g~p-p~-i~W~k~g~~~~~-~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a 79 (95)
T 2ckn_A 8 QPWGVPVEVES-LLVHPGDLLQLRCRLRDDV-QS-INWLRDGVQLVE-SNRTRIT----GEEVEVRDSIPADSGLYACVT 79 (95)
T ss_dssp CSCCBTTBBCC-EEECTTSCEEEECCEESSC-CE-EEEEBTTBCCCC-CSSEEEC----SSEEEESSCCGGGSEEEEEEE
T ss_pred CCCEEEcCcce-EEEcCCCeEEEEEECCCCC-Cc-eEEEECCEecCC-CCCEEEe----CCEEEECCCChHHCEEEEEEe
Confidence 44555444333 3488999999999999987 66 999998764432 2222222 235999999999999999999
Q ss_pred EcCCccceecEEEEE
Q psy3823 302 RNEQGSQRTPCTFHV 316 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v 316 (365)
.|..|..+..+.|.|
T Consensus 80 ~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 80 SSPSGSDTTYFSVNV 94 (95)
T ss_dssp EETTEEEEEEEEEEE
T ss_pred ccCCCcEEEEEEEEE
Confidence 999999888887776
No 481
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.27 E-value=1.5e-11 Score=87.14 Aligned_cols=74 Identities=18% Similarity=0.377 Sum_probs=62.5
Q ss_pred cceecCCcEEEEEEEEecCCCCeeEEEeCCeEEeeCCCCceEEeeceEEEeeecCCCCeEEEEEEEcCCCCCCcccEEEE
Q psy3823 130 SVLNEGVDIYFDCHIQANPPYKKLIWTHNGITISNNASAGRIITNQTLVLQSVTRHSGGLYACSAINSQGEGGSTPFDLN 209 (365)
Q Consensus 130 ~~~~~g~~v~l~C~~~~~p~~~~i~W~~~~~~l~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~l~ 209 (365)
..+.+|+.+.|.|.+.|.|.+. +.|++++..+.... ...|.|.+++..|+|.|+|.+.|..|...+..+.|.
T Consensus 13 ~~v~~G~~~~l~C~~~g~p~p~-i~W~~~~~~~~~~~-------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~ 84 (91)
T 3bfo_A 13 QKLMPGSTLVLQCVAVGSPIPH-YQWFKNELPLTHET-------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEII 84 (91)
T ss_dssp EEECTTSCEEEECEEECSSCCE-EEEEETTEECTTCC-------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEE
T ss_pred cEecCCCcEEEEEEeccCCCCE-EEEEcCCeeCCcCC-------CCeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEEE
Confidence 4578999999999999998886 99999998876432 358999999999999999999999986555667777
Q ss_pred Ee
Q psy3823 210 IN 211 (365)
Q Consensus 210 v~ 211 (365)
|.
T Consensus 85 V~ 86 (91)
T 3bfo_A 85 ID 86 (91)
T ss_dssp EC
T ss_pred Ee
Confidence 65
No 482
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=2e-12 Score=95.54 Aligned_cols=94 Identities=6% Similarity=-0.069 Sum_probs=68.3
Q ss_pred cCCeEeeCCceEEEEecCCcEEEEEEeCCC---CCcceEEEEeCCCcCCCCC--CceeEe------cCCeEEEEEEccCC
Q psy3823 10 DEPVCKQSQQRIYGALRNEQVLVSCTVDAN---PQAQYFTWAFNNSGTAPRP--LTSYSI------QDGSTSVARYTPTS 78 (365)
Q Consensus 10 ~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~---p~~~~v~W~~~~~~~l~~~--~~~~~~------~~~~~~~l~i~~~~ 78 (365)
.++..+...+....+.+|++++|.|...+. |.+ .|+|||+....+... ...... .......|.|.+++
T Consensus 10 ~~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P-~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 88 (118)
T 2edn_A 10 EPTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKP-TIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVV 88 (118)
T ss_dssp CCSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCC-CCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCC
T ss_pred CCcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCC-cEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCC
Confidence 334444455677889999999999996554 788 999999753212221 111111 11135689999999
Q ss_pred CCCCeEEEEEEEeCCCCCcccEEEEE
Q psy3823 79 ELEYGTLLCWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 79 ~~d~G~Y~C~a~~~~~~~~~~~~l~V 104 (365)
..|+|.|+|+|.+..+..+..+.|+|
T Consensus 89 ~~D~G~Y~Cevsn~~g~~s~~~~L~V 114 (118)
T 2edn_A 89 LGDRGYYRLEVKAKDTCDSCGFNIDV 114 (118)
T ss_dssp TTTCSCEEEEEECSSCEEEEEECCEE
T ss_pred hhhCEEEEEEEEEcCCcEEEEEEEEE
Confidence 99999999999999998878888888
No 483
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=3.6e-12 Score=94.74 Aligned_cols=93 Identities=14% Similarity=0.110 Sum_probs=70.0
Q ss_pred eecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEe-cCCeEEEEEEccCCCCCCeE
Q psy3823 6 FNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSI-QDGSTSVARYTPTSELEYGT 84 (365)
Q Consensus 6 ~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~ 84 (365)
+.+...|..+...+....+.+|+.++|.|.+.+.|.+ .++|++++.. +......... .++....|.|.+++.+|+|.
T Consensus 7 l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p-~v~W~k~g~~-l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 84 (115)
T 2cr6_A 7 GLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYE-PVHWFLDKTP-LHANELNEIDAQPGGYHVLTLRQLALKDSGT 84 (115)
T ss_dssp CCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCC-SCEEEESSCE-ECCSSSCCBCCBTTTBCCBEECSCCTTTCEE
T ss_pred EEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCC-ccEEEECCEE-CCCCCcEEEEEcCCCEEEEEEcCCChhhCEE
Confidence 3455555444445567788999999999998888998 9999999988 6554432222 23444579999999999999
Q ss_pred EEEEEEeCCCCCcccEEEEE
Q psy3823 85 LLCWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 85 Y~C~a~~~~~~~~~~~~l~V 104 (365)
|+|.+ +.....+.|.|
T Consensus 85 Y~C~~----g~~~~~~~L~V 100 (115)
T 2cr6_A 85 IYFEA----GDQRASAALRV 100 (115)
T ss_dssp EEEEE----TTEECCEEEEE
T ss_pred EEEEE----CCeeEEEEEEE
Confidence 99993 44557788888
No 484
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.26 E-value=3.8e-11 Score=88.74 Aligned_cols=78 Identities=17% Similarity=0.250 Sum_probs=63.8
Q ss_pred eEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCccc
Q psy3823 20 RIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRTP 99 (365)
Q Consensus 20 ~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~ 99 (365)
....+.+|+.+.|.|.+. .|.+ .+.|+|++.. +..........++....|.|.+++.+|+|.|+|.+.| ....
T Consensus 21 ~~~~~~~G~~v~L~C~~~-~p~~-~v~W~k~g~~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~ 93 (113)
T 2cpc_A 21 VYVAAVRLERVVLTCELC-RPWA-EVRWTKDGEE-VVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD----ESAS 93 (113)
T ss_dssp EEEEEETTCCEEEEEEES-CTTC-CCEEEETTEE-CCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS----CEEE
T ss_pred eeEEEEcCCeEEEEEEec-CCCC-eEEEEECCEE-CccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec----CcEE
Confidence 446788999999999984 7888 9999999988 7655554444555566899999999999999999987 4467
Q ss_pred EEEEE
Q psy3823 100 CTFHV 104 (365)
Q Consensus 100 ~~l~V 104 (365)
+.|.|
T Consensus 94 ~~l~V 98 (113)
T 2cpc_A 94 FTVTV 98 (113)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88888
No 485
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.26 E-value=1.4e-11 Score=90.40 Aligned_cols=86 Identities=8% Similarity=-0.051 Sum_probs=64.1
Q ss_pred CceEEEEecCCcEEEEEEeCCCCC---cceEEEEeCCCcCCCC--CCceeEe------cCCeEEEEEEccCCCCCCeEEE
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQ---AQYFTWAFNNSGTAPR--PLTSYSI------QDGSTSVARYTPTSELEYGTLL 86 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~---~~~v~W~~~~~~~l~~--~~~~~~~------~~~~~~~l~i~~~~~~d~G~Y~ 86 (365)
.+....+.+|+.++|.|.+.+.|. + .++|+|++...+.. ....... .......|.|.+++.+|+|.|+
T Consensus 10 ~p~~~~v~~G~~v~L~C~~~g~p~~~~p-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 88 (108)
T 3cx2_A 10 RPQDGEVTVGGSITFSARVAGASLLKPP-VVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYR 88 (108)
T ss_dssp CCCCEEEETTCCEEEEEEEECC-CCSCC-EEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEE
T ss_pred CCCcEEEeCCCCEEEEEEECCCccCCCc-EEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEE
Confidence 455677899999999999888888 8 99999987321111 1111111 1113468999999999999999
Q ss_pred EEEEeCCCCCcccEEEEE
Q psy3823 87 CWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 87 C~a~~~~~~~~~~~~l~V 104 (365)
|.|.|..|.....+.|.|
T Consensus 89 C~a~N~~G~~~~~~~L~V 106 (108)
T 3cx2_A 89 CEVSTKDKFDCSNFNLTV 106 (108)
T ss_dssp EEEECSSCEEEEEEEEEE
T ss_pred EEEecCCCceEEEEEEEE
Confidence 999999998888888887
No 486
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.26 E-value=1.8e-11 Score=91.44 Aligned_cols=84 Identities=10% Similarity=-0.016 Sum_probs=63.3
Q ss_pred eeeecCceEEEEEEEeee---CCCceeEEEeCCCCCCC--CCCceeEe--eC----CCEEEEEEcCCCcccCeEEEEEEE
Q psy3823 234 YGALRNEQVLVSCTVDAN---PQAQYFTWAFNNSDTAP--RPLTSYSI--QD----GSTSVARYTPTSELEYGTLLCWAR 302 (365)
Q Consensus 234 ~~~~~g~~~~l~C~~~~~---p~~~~~~W~~~~~~~~~--~~~~~~~~--~~----~~~s~l~i~~v~~~d~G~Y~C~a~ 302 (365)
..+.+|+.++|.|.+.+. |.|. +.|++++..... ......+. .+ ...+.|.|.+++..|+|.|+|.|.
T Consensus 17 v~V~eG~~v~L~C~v~g~~~~p~P~-V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevs 95 (126)
T 2dav_A 17 GTVKVGEDITFIAKVKAEDLLRKPT-IKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVT 95 (126)
T ss_dssp CEEETTCCEEEEEEEECCCSSSCCE-EEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEE
T ss_pred eEEeCCCCEEEEEEEeccCCCCCCc-EEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEE
Confidence 338999999999999875 7887 999996421100 01112221 11 124679999999999999999999
Q ss_pred cCCccceecEEEEEEc
Q psy3823 303 NEQGSQRTPCTFHVVK 318 (365)
Q Consensus 303 n~~g~~~~~~~l~v~~ 318 (365)
|..|..+..+.|.|..
T Consensus 96 n~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 96 YKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CSSCEEEECCEEEEEC
T ss_pred eCCCcEEEEEEEEEEe
Confidence 9999999999999987
No 487
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.26 E-value=6.2e-11 Score=85.50 Aligned_cols=92 Identities=11% Similarity=0.163 Sum_probs=71.1
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+.........+..|+.+.|.|.+. .|.+. +.|+++|..... ..+..+..++....|.|.+++.+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~-v~W~k~g~~i~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLE-VKWYKNGQEIRP-STKYIFEHKGCQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSC-EEEEESSCBCCC-BTTEEEEEETTEEEEEEEEECTTTCCEEEEEE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCce-EEEEECCEECCC-CCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE
Confidence 4566665444434478999999999998 68887 999999875432 34555566677778999999999999999999
Q ss_pred EcCCccceecEEEEEEcCc
Q psy3823 302 RNEQGSQRTPCTFHVVKAG 320 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~~~~ 320 (365)
|..+.++.|.|..++
T Consensus 83 ----g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 ----GDEKCSTELFVRSGP 97 (100)
T ss_dssp ----TTEEEEEEEEECCSC
T ss_pred ----CCceEEEEEEEecCC
Confidence 777778888887553
No 488
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=1.9e-11 Score=88.13 Aligned_cols=80 Identities=9% Similarity=0.169 Sum_probs=65.4
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
++..+.+.+|+.++|.|.+.+.| + .+.|+|++.. +........ ... .|.|.+++.+|.|.|+|.|.|..+...
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p-~i~W~k~g~~-~~~~~~~~~-~~~---~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 81 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-Q-SINWLRDGVQ-LAESNRTRI-TGE---EVEVQDSVPADSGLYACVTSSPSGSDT 81 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-C-EEEEEESSSB-CCCCSSEEE-CSS---EEEETTCCTTTCEEEEEEEEETTEEEE
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-C-eEEEEECCEE-CCCCCcEEE-ECC---EEEEccCCHHHCEEEEEEEEeCCceEE
Confidence 45677789999999999987776 7 9999999988 655444332 233 899999999999999999999988877
Q ss_pred ccEEEEE
Q psy3823 98 TPCTFHV 104 (365)
Q Consensus 98 ~~~~l~V 104 (365)
..+.|.|
T Consensus 82 ~~~~l~V 88 (99)
T 2cr3_A 82 TYFSVNV 88 (99)
T ss_dssp EEEEECB
T ss_pred EEEEEEE
Confidence 7777777
No 489
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.25 E-value=7e-10 Score=97.12 Aligned_cols=148 Identities=12% Similarity=0.173 Sum_probs=89.3
Q ss_pred ccceecCCcEEEEEEEEec-------CCCCeeEEEeCCeEEeeCCCCceEEe--eceEEEeeecCCCCeEEEEEEEcCCC
Q psy3823 129 ASVLNEGVDIYFDCHIQAN-------PPYKKLIWTHNGITISNNASAGRIIT--NQTLVLQSVTRHSGGLYACSAINSQG 199 (365)
Q Consensus 129 ~~~~~~g~~v~l~C~~~~~-------p~~~~i~W~~~~~~l~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~~ 199 (365)
+..+..|++++|.|.+.+. |.+. |.|++||..+.... ..... .+.|.|.++.+.+ |.|+|.+.+. |
T Consensus 13 ~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~-i~W~~~g~~i~~~~--~~~~~~~~~~L~i~~~~~~~-g~Y~C~a~~~-g 87 (303)
T 1i1r_A 13 SPVVQLHSNFTAVCVLKEKCMDYFHVNANY-IVWKTNHFTIPKEQ--YTIINRTASSVTFTDIASLN-IQLTCNILTF-G 87 (303)
T ss_dssp SCEEETTCCEEEEEEECHHHHHHHTCCGGG-EEEEETTEECCGGG--CEEEETTEEEEEECSCCCSE-EEEEEEEEET-T
T ss_pred CceEeCCCCEEEEEEECCccccccCCChhh-eEEEECCEECChhh--eeeeCCcEEEEEEcCcCCCc-eEEEEecccC-C
Confidence 3468899999999999863 5566 99999999886431 12222 3579999998874 9999999874 3
Q ss_pred CCC--cccEEEEEeeeeecccccCCCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEe-
Q psy3823 200 EGG--STPFDLNINKMVNLIFNSIDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSI- 276 (365)
Q Consensus 200 ~~~--s~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~- 276 (365)
... ...+.+.+. .+| +....|.|...+..... +.|........ ...+.+.
T Consensus 88 ~~~~~~~~~~l~v~----------~~P--------------~~P~~l~~~~~~~~~v~-l~W~~~~~~~~--~~~Y~v~~ 140 (303)
T 1i1r_A 88 QLEQNVYGITIISG----------LPP--------------EKPKNLSCIVNEGKKMR-CEWDGGRETHL--ETNFTLKS 140 (303)
T ss_dssp TEEEEEEEEEEEEE----------CCC--------------CCCEEEEEEEETTSCCE-EEEECCSCCSS--CCEEEEEE
T ss_pred CcceEEEEEEEecc----------CCC--------------CCCeeeEEEECCCCcEE-EEccCCCCCCC--CcCEEEEE
Confidence 221 122333343 333 23344566655444444 67765322111 1122110
Q ss_pred ------------eCCCEEEEEEcCC-CcccCeEEEEEEEcCCccc
Q psy3823 277 ------------QDGSTSVARYTPT-SELEYGTLLCWARNEQGSQ 308 (365)
Q Consensus 277 ------------~~~~~s~l~i~~v-~~~d~G~Y~C~a~n~~g~~ 308 (365)
..+....+.|.++ .....-.|++.|.|..|..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~ 185 (303)
T 1i1r_A 141 EWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKV 185 (303)
T ss_dssp EETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEE
T ss_pred EecCCCCccCCCcCCCceEEEECCcCcccccEEEEEEEEcCCCCc
Confidence 1112234667777 6666777889999999875
No 490
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.25 E-value=1.2e-11 Score=111.19 Aligned_cols=104 Identities=11% Similarity=0.134 Sum_probs=66.0
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCC---ceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPL---TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQG 94 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~ 94 (365)
.+..+.+.+|+.+.|.|.+.+ |.+ .++|++++...+.... .... .++ +|.|.+++.+|+|.|+|.|.|..|
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p-~i~W~~~~~~~~~~~~~~~r~~~-~~~---~L~I~~v~~~D~G~Y~C~a~N~~g 325 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGM-TKVWVSPSNEQVLSQGSNGSVSV-RNG---DLFFKKVQVEDGGVYTCYAMGETF 325 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTC-EEEEECTTSCBCCSCCSSSSEEE-ETT---EEEESSCCTTSCEEEEEEEECSSC
T ss_pred cccCceecCCCeEEEEeEeeC-CCC-eEEEEeCCCeeEeecccCCceEe-ecC---eEEEeecCcccCEEEEEEEecCCC
Confidence 344567899999999999888 888 9999998765232221 2222 344 799999999999999999999988
Q ss_pred CCcccEEEEEEeccccCCCCCCCeEEEEcCCccCccceecCCcEEEEEEEEecCCCC
Q psy3823 95 NQRTPCTFHVVKAGECEHPVDKPSVQIKLGRNLNASVLNEGVDIYFDCHIQANPPYK 151 (365)
Q Consensus 95 ~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~ 151 (365)
.....+.|.| ... ..+|+.++|.|.+.|.|.|.
T Consensus 326 ~~~~~~~l~V---------~~~---------------~~~g~~~~l~C~~~g~P~P~ 358 (361)
T 2xot_A 326 NETLSVELKV---------YNF---------------TLHGHHDTLNAAADPWSHPQ 358 (361)
T ss_dssp EEEEEEEEEE---------ESS---------------CCC-----------------
T ss_pred ccEEEEEEEE---------Eee---------------eccCCceEEEEEeCCCCCCc
Confidence 8878888888 221 14788999999999998876
No 491
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.25 E-value=1.1e-12 Score=98.56 Aligned_cols=98 Identities=14% Similarity=0.248 Sum_probs=77.3
Q ss_pred EEeecccCCeEeeCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCC--CceeE--e--cCCeEEEEEEccC
Q psy3823 4 LIFNSTDEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRP--LTSYS--I--QDGSTSVARYTPT 77 (365)
Q Consensus 4 ~~~~~~~~p~~~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~--~~~~~--~--~~~~~~~l~i~~~ 77 (365)
+.+.+.++|.+.. +....+.+|+.+.|.|.+.+.|.+..+.|++++.. +... ..... . .++..+.|.|.++
T Consensus 7 ~~l~V~~~P~i~~--~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~L~I~~v 83 (122)
T 2cry_A 7 GTLTVNGPPIISS--TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENV-LESGTSGRYTVETISTEEGVISTLTISNI 83 (122)
T ss_dssp CCCCCCSSCCEEE--ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCE-ECSEEETTEEEEEEEETTEEEEEEECTTC
T ss_pred EEEEEecCCCccC--CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEE-ccCCCCCCEEEEEecCCCceEEEEEEcCC
Confidence 4567888898766 56677899999999999999999823999999987 6542 22121 1 2333668999999
Q ss_pred CCCCC-eEEEEEEEeCCCCCcccEEEEE
Q psy3823 78 SELEY-GTLLCWARNEQGNQRTPCTFHV 104 (365)
Q Consensus 78 ~~~d~-G~Y~C~a~~~~~~~~~~~~l~V 104 (365)
+..|. |.|+|.|.|..|.....+.|.|
T Consensus 84 ~~~D~~G~Y~C~a~N~~G~~~~~~~l~V 111 (122)
T 2cry_A 84 VRADFQTIYNCTAWNSFGSDTEIIRLKE 111 (122)
T ss_dssp CHHHHHSCEEEEEECSSCEEEEEECCCC
T ss_pred ChhhCCceEEEEEECCCCeEEEEEEEEE
Confidence 99999 9999999999998888888877
No 492
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.25 E-value=2.4e-11 Score=90.61 Aligned_cols=92 Identities=15% Similarity=0.175 Sum_probs=67.2
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeE--eeC--CCEEEEEEcCCCcccCeEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYS--IQD--GSTSVARYTPTSELEYGTL 297 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~--~~~--~~~s~l~i~~v~~~d~G~Y 297 (365)
++|.+...... ...+...|.|.+.|.|.|. +.|+++|....... .... ... ...+.|.|.+++.+|+|.|
T Consensus 7 ~pP~i~~~~~~----~~~~~~~l~C~~~g~P~p~-i~W~k~g~~l~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 80 (118)
T 1wwc_A 7 YPPRVVSLEEP----ELRLEHCIEFVVRGNPPPT-LHWLHNGQPLRESK-IIHVEYYQEGEISEGCLLFNKPTHYNNGNY 80 (118)
T ss_dssp CCCCCCCCCCC----CCCCEEEEEEEEECSSCCE-EEEEETTEECCCSS-SEEEEEEECSSEEEEEEEEESCCGGGCEEE
T ss_pred cCCceeccCCC----eeccceEEEEEeeeeCCCe-EEEEECCEECCCCC-ceeEEEeccCccccEEEEECCCChhcCEEE
Confidence 77776544322 1236678899999999998 99999987543322 2222 111 1345799999999999999
Q ss_pred EEEEEcCCccceecEEEEEEcC
Q psy3823 298 LCWARNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 298 ~C~a~n~~g~~~~~~~l~v~~~ 319 (365)
+|.|.|..|..+.++.|.|...
T Consensus 81 ~C~a~N~~G~~~~~~~l~v~~~ 102 (118)
T 1wwc_A 81 TLIAKNPLGTANQTINGHFLKE 102 (118)
T ss_dssp EEEEEETTEEEEEEEEECCSCC
T ss_pred EEEEECCCCeEeeEEEEEEccC
Confidence 9999999999998888876544
No 493
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.24 E-value=2.5e-11 Score=88.63 Aligned_cols=83 Identities=10% Similarity=0.009 Sum_probs=64.6
Q ss_pred CCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCC
Q psy3823 17 SQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQ 96 (365)
Q Consensus 17 ~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~ 96 (365)
..+....+.+|+.+.|.|.+.+.|.+ +.|++++.. +..........++....|.|.+++.+|+|.|+|.|.|. ..
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~~~~~~--v~W~k~g~~-~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~--~~ 87 (106)
T 2dlt_A 13 QDIADLTVKAAEQAVFKCEVSDEKVT--GKWYKNGVE-VRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY--AL 87 (106)
T ss_dssp ECCCCEEEESSCCEECCCEESCSSCE--EEEEESSCB-CCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS--CC
T ss_pred cCCCCeEEeCCCeEEEEEEEcCCCcc--eEEEcCCEE-CcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC--Cc
Confidence 34456778999999999998776654 999999998 66555444445555678999999999999999999987 34
Q ss_pred cccEEEEE
Q psy3823 97 RTPCTFHV 104 (365)
Q Consensus 97 ~~~~~l~V 104 (365)
...+.|.|
T Consensus 88 ~~~~~l~V 95 (106)
T 2dlt_A 88 SLSAKLNF 95 (106)
T ss_dssp CCCBCEEE
T ss_pred eEEEEEEE
Confidence 45666666
No 494
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.24 E-value=4.8e-11 Score=85.72 Aligned_cols=86 Identities=19% Similarity=0.250 Sum_probs=66.2
Q ss_pred CeEeeCCceEEEEecCCcEEEEEEeC-CCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEE
Q psy3823 12 PVCKQSQQRIYGALRNEQVLVSCTVD-ANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWAR 90 (365)
Q Consensus 12 p~~~~~~~~~~~v~~G~~~~l~C~~~-~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 90 (365)
|......+....+.+|+.++|.|.+. +.|.+ .+.|++++.. ..... ....++ .|.|.+++.+|+|.|+|.|.
T Consensus 10 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~-~v~W~k~~~~-~~~~~--~~~~~~---~L~i~~v~~~D~G~Y~C~a~ 82 (98)
T 1gl4_B 10 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAY-TLVWTRLHNG-KLPSR--AMDFNG---ILTIRNVQPSDAGTYVCTGS 82 (98)
T ss_dssp EEEEECSCCEEEECTTCCEEEEEEEEESSSCC-EEEEEEGGGB-CCCTT--EEEETT---EEEECSCCGGGCEEEEEEEE
T ss_pred cEEEEeCCCCeEEecCCCEEEEEeCCCCCCCc-EEEEEeCCCC-CCCce--eecCCC---EEEEeCCChhhCEEEEEEec
Confidence 33333455777899999999999976 68888 9999998654 32222 222344 79999999999999999999
Q ss_pred eCCCCCcccEEEEE
Q psy3823 91 NEQGNQRTPCTFHV 104 (365)
Q Consensus 91 ~~~~~~~~~~~l~V 104 (365)
|..|.....+.|.|
T Consensus 83 n~~g~~~~~~~l~V 96 (98)
T 1gl4_B 83 NMFAMDQGTATLHV 96 (98)
T ss_dssp CSSCEEEEEEEEEE
T ss_pred CCCCccccEEEEEE
Confidence 99888777777776
No 495
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=3.9e-11 Score=87.08 Aligned_cols=90 Identities=11% Similarity=0.186 Sum_probs=68.4
Q ss_pred CCCceecCccceeeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCCceeEeeCCCEEEEEEcCCCcccCeEEEEEE
Q psy3823 222 DEPVCKQSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWA 301 (365)
Q Consensus 222 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a 301 (365)
.+|.+...... ..+..|+.+.|.|.+.+ |.+. +.|++++..... ..+..+..++..+.|.|.+++.+|+|.|+|.|
T Consensus 7 ~pp~~~~~~~~-~~v~~G~~v~l~C~~~~-~~~~-v~W~k~g~~~~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (103)
T 2edf_A 7 GPAAIIKPLED-QWVAPGEDVELRCELSR-AGTP-VHWLKDRKAIRK-SQKYDVVCEGTMAMLVIRGASLKDAGEYTCEV 82 (103)
T ss_dssp CCCCEEECCCC-EEECTTSCEEECCEESS-SSCC-CCEEESSCBCCC-SSSEEEEEETTEEEEEESSCCTTTCSEEEEEC
T ss_pred CCcEEEecCCc-cEEcCCCCEEEEEEEeC-CCCc-EEEEECCEEccC-CCCEEEEECCCEEEEEECCCCcccCEEEEEEE
Confidence 34555544434 34889999999999987 7777 999999875433 34555566677788999999999999999999
Q ss_pred EcCCccceecEEEEEEcC
Q psy3823 302 RNEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 302 ~n~~g~~~~~~~l~v~~~ 319 (365)
.| ...++.|.|..+
T Consensus 83 ~n----~~~~~~l~V~~~ 96 (103)
T 2edf_A 83 EA----SKSTASLHVEEK 96 (103)
T ss_dssp SS----CEEEEEEEECCC
T ss_pred cc----CCcEEEEEEeCC
Confidence 99 356677777644
No 496
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=2.2e-11 Score=89.86 Aligned_cols=85 Identities=7% Similarity=-0.024 Sum_probs=63.7
Q ss_pred eeeecCceEEEEEEEeee---CCCceeEEEeCCCCCCCCC--CceeEe--eCC----CEEEEEEcCCCcccCeEEEEEEE
Q psy3823 234 YGALRNEQVLVSCTVDAN---PQAQYFTWAFNNSDTAPRP--LTSYSI--QDG----STSVARYTPTSELEYGTLLCWAR 302 (365)
Q Consensus 234 ~~~~~g~~~~l~C~~~~~---p~~~~~~W~~~~~~~~~~~--~~~~~~--~~~----~~s~l~i~~v~~~d~G~Y~C~a~ 302 (365)
..+.+|+.++|.|.+.+. |.|. |.|++++....... ....+. ... ..+.|.|.++...|+|.|+|.|.
T Consensus 22 v~V~eG~~v~L~C~v~g~~~~p~P~-V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevs 100 (118)
T 2edn_A 22 VSVETGKDAVVVAKVNGKELPDKPT-IKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVK 100 (118)
T ss_dssp CEEETTSCEECCEEEETTTSSSCCC-CEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEE
T ss_pred eEEeCCCCEEEEEEEeccCCCCCCc-EEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEE
Confidence 448999999999999875 6887 99999642211111 112221 111 24679999999999999999999
Q ss_pred cCCccceecEEEEEEcC
Q psy3823 303 NEQGSQRTPCTFHVVKA 319 (365)
Q Consensus 303 n~~g~~~~~~~l~v~~~ 319 (365)
|..|..+..+.|.|..+
T Consensus 101 n~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 101 AKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp CSSCEEEEEECCEEECC
T ss_pred EcCCcEEEEEEEEEEcC
Confidence 99999999999988764
No 497
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.23 E-value=3.9e-11 Score=84.96 Aligned_cols=76 Identities=12% Similarity=0.212 Sum_probs=62.8
Q ss_pred CceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCc
Q psy3823 18 QQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQR 97 (365)
Q Consensus 18 ~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~ 97 (365)
.+....+.+|+.+.|.|.+.++|.+ .+.|++++.. +.... . ..|.|.+++.+|+|.|+|.|.|..+...
T Consensus 9 ~p~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~~~~-~~~~~------~---~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 77 (91)
T 3bfo_A 9 EPTSQKLMPGSTLVLQCVAVGSPIP-HYQWFKNELP-LTHET------K---KLYMVPYVDLEHQGTYWCHVYNDRDSQD 77 (91)
T ss_dssp CCCCEEECTTSCEEEECEEECSSCC-EEEEEETTEE-CTTCC------S---SEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCCccEecCCCcEEEEEEeccCCCC-EEEEEcCCee-CCcCC------C---CeEEECCCCHHhCEEEEEEEEcCCCCEE
Confidence 3445668999999999998899999 9999999887 54332 1 2799999999999999999999988654
Q ss_pred -ccEEEEE
Q psy3823 98 -TPCTFHV 104 (365)
Q Consensus 98 -~~~~l~V 104 (365)
..+.|.|
T Consensus 78 s~~~~l~V 85 (91)
T 3bfo_A 78 SKKVEIII 85 (91)
T ss_dssp CCCEEEEE
T ss_pred eeeEEEEE
Confidence 6677777
No 498
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=1e-10 Score=84.80 Aligned_cols=82 Identities=15% Similarity=0.174 Sum_probs=66.1
Q ss_pred eCCceEEEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCC
Q psy3823 16 QSQQRIYGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGN 95 (365)
Q Consensus 16 ~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~ 95 (365)
...+....+.+|++++|.|.. +.|.+ .++|++++.. +..........++....|.|.+++.+|+|.|+|. .+.
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~-~~p~~-~v~W~k~~~~-l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~ 84 (103)
T 2dku_A 12 TEELTNLQVEEKGTAVFTCKT-EHPAA-TVTWRKGLLE-LRASGKHQPSQEGLTLRLTISALEKADSDTYTCD----IGQ 84 (103)
T ss_dssp SSCCCCEEEETTSEEEEEEEC-SSCCS-CCEEEESSCB-CCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----CSS
T ss_pred EecCCcEEEeCCCcEEEEEEe-CCCCC-eEEEEeCCEE-CCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----eCC
Confidence 344566788999999999995 78888 9999999998 7655554444456666899999999999999998 555
Q ss_pred CcccEEEEE
Q psy3823 96 QRTPCTFHV 104 (365)
Q Consensus 96 ~~~~~~l~V 104 (365)
....+.|.|
T Consensus 85 ~~~~~~l~V 93 (103)
T 2dku_A 85 AQSRAQLLV 93 (103)
T ss_dssp CBCCEEEEE
T ss_pred ceEEEEEEE
Confidence 667788888
No 499
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.23 E-value=6.3e-11 Score=86.00 Aligned_cols=80 Identities=15% Similarity=0.214 Sum_probs=62.6
Q ss_pred eeeecCceEEEEEEEeeeCCCceeEEEeCCCCCCCCCC-ceeEeeCCCEEEEEEcCCCcccCeEEEEEEEcCCccceecE
Q psy3823 234 YGALRNEQVLVSCTVDANPQAQYFTWAFNNSDTAPRPL-TSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGSQRTPC 312 (365)
Q Consensus 234 ~~~~~g~~~~l~C~~~~~p~~~~~~W~~~~~~~~~~~~-~~~~~~~~~~s~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 312 (365)
..+..|+.+.|.|.+.+ |.+. +.|++++........ ++.+..++....|.|.+++.+|+|.|+|.|.| .+..+
T Consensus 17 ~~v~~G~~v~l~C~~~~-~~~~-v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~~ 90 (103)
T 1x44_A 17 TTAYCGERVELECEVSE-DDAN-VKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG----GQSSA 90 (103)
T ss_dssp EEEETTEEEEEEEECSS-SSCC-CEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT----EEEEE
T ss_pred EEEECCCCEEEEEEecC-CCCe-EEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC----CcEEE
Confidence 34889999999999977 7787 999999875433222 44556666778899999999999999999988 45666
Q ss_pred EEEEEcC
Q psy3823 313 TFHVVKA 319 (365)
Q Consensus 313 ~l~v~~~ 319 (365)
.|.|..+
T Consensus 91 ~l~V~~~ 97 (103)
T 1x44_A 91 KLSVDLK 97 (103)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 7777654
No 500
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=4e-11 Score=87.21 Aligned_cols=76 Identities=13% Similarity=0.147 Sum_probs=62.0
Q ss_pred EEEecCCcEEEEEEeCCCCCcceEEEEeCCCcCCCCCCceeEecCCeEEEEEEccCCCCCCeEEEEEEEeCCCCCcccEE
Q psy3823 22 YGALRNEQVLVSCTVDANPQAQYFTWAFNNSGTAPRPLTSYSIQDGSTSVARYTPTSELEYGTLLCWARNEQGNQRTPCT 101 (365)
Q Consensus 22 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~~~~~~~~~~~~ 101 (365)
..+.+|+.++|.|.+.+.|.+ +.|++++.. +..........++....|.|.+++.+|+|.|+|.+.|. ...+.
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~--v~W~k~g~~-~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~----~~~~~ 92 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP--ATWYKDGQK-VEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGV----SAFFG 92 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC--CEEEETTEE-CCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSC----CCCEE
T ss_pred EEEeCCCcEEEEEEecCCCCc--cEEeeCCEE-CCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCc----eEEEE
Confidence 678999999999998887776 899999988 66554444444555678999999999999999999875 34677
Q ss_pred EEE
Q psy3823 102 FHV 104 (365)
Q Consensus 102 l~V 104 (365)
|.|
T Consensus 93 l~V 95 (104)
T 2e6p_A 93 VTV 95 (104)
T ss_dssp EEE
T ss_pred EEE
Confidence 777
Done!