BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3825
(332 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 169/313 (53%), Gaps = 99/313 (31%)
Query: 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPE 73
ED YDTVL AIGR+ L ++ + NAGV V + +DS E TN+ N++AVGD+++ KPE
Sbjct: 275 EDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVDS-QEATNVANIYAVGDIIYGKPE 333
Query: 74 LTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEI 133
LTPVAV AG+LLA RLYG T +MDY++VATTVFTPLEY CVGLSEE A + +GAD +E+
Sbjct: 334 LTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEV 393
Query: 134 YHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEF 193
+H YYKPTEF
Sbjct: 394 --------------------------------------------------FHGYYKPTEF 403
Query: 194 FIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYL 253
FIPQ++ + CYL
Sbjct: 404 FIPQKSVRYCYL------------------------------------------------ 415
Query: 254 KVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVT 313
K V ER Q+V G+H+IGP AGEVIQG+AAA+K GLT TL +TVGIHPT AEEFTR+
Sbjct: 416 KAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLA 475
Query: 314 ITKRSGEDPTPQS 326
ITKRSG DPTP S
Sbjct: 476 ITKRSGLDPTPAS 488
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 168/311 (54%), Gaps = 99/311 (31%)
Query: 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPE 73
ED YDTVL AIGR+ L ++ + NAGV V + +DS E TN+ N++AVGD+++ KPE
Sbjct: 271 EDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVDS-QEATNVANIYAVGDIIYGKPE 329
Query: 74 LTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEI 133
LTPVAV AG+LLA RLYG T +MDY++VATTVFTPLEY CVGLSEE A + +GAD +E+
Sbjct: 330 LTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEV 389
Query: 134 YHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEF 193
+H YYKPTEF
Sbjct: 390 --------------------------------------------------FHGYYKPTEF 399
Query: 194 FIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYL 253
FIPQ++ + CYL
Sbjct: 400 FIPQKSVRYCYL------------------------------------------------ 411
Query: 254 KVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVT 313
K V ER Q+V G+H+IGP AGEVIQG+AAA+K GLT TL +TVGIHPT AEEFTR+
Sbjct: 412 KAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLA 471
Query: 314 ITKRSGEDPTP 324
ITKRSG DPTP
Sbjct: 472 ITKRSGLDPTP 482
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/308 (43%), Positives = 165/308 (53%), Gaps = 99/308 (32%)
Query: 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPE 73
ED YDTVL AIGR+ L ++ + NAGV V + +DS E TN+ N++AVGD+++ KPE
Sbjct: 275 EDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPVDS-QEATNVANIYAVGDIIYGKPE 333
Query: 74 LTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEI 133
LTPVAV AG+LLA RLYG T +MDY++VATTVFTPLEY CVGLSEE A + +GAD +E+
Sbjct: 334 LTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEV 393
Query: 134 YHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEF 193
+H YYKPTEF
Sbjct: 394 --------------------------------------------------FHGYYKPTEF 403
Query: 194 FIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYL 253
FIPQ++ + CYL
Sbjct: 404 FIPQKSVRYCYL------------------------------------------------ 415
Query: 254 KVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVT 313
K V ER Q+V G+H+IGP AGEVIQG+AAA+K GLT TL +TVGIHPT AEEFTR+
Sbjct: 416 KAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLA 475
Query: 314 ITKRSGED 321
ITKRSG D
Sbjct: 476 ITKRSGLD 483
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 163/326 (50%), Gaps = 99/326 (30%)
Query: 4 ATGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKID-SDNEQTNIPNVF 62
A + ++ ED ++TVL+A+GR + T + GVK+ + KI +D EQTN+P ++
Sbjct: 271 AKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIY 330
Query: 63 AVGDVLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKA 122
A+GD+L K ELTPVA+QAG+LLA RLYG T + DY NV TTVFTPLEYGC GLSEEKA
Sbjct: 331 AIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYDNVPTTVFTPLEYGCCGLSEEKA 390
Query: 123 EELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLKV 182
E +G +N+E+
Sbjct: 391 VEKFGEENIEV------------------------------------------------- 401
Query: 183 IYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFF 242
YH+++ P E+ +P R+ +CY K
Sbjct: 402 -YHSFFWPLEWTVPSRDNNKCYAK------------------------------------ 424
Query: 243 IPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIH 302
V+C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+GIH
Sbjct: 425 ------------VICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGIH 472
Query: 303 PTLAEEFTRVTITKRSGEDPTPQSCC 328
P AE FT +++TKRSG D CC
Sbjct: 473 PVCAEIFTTLSVTKRSGGDILQSGCC 498
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 212 bits (539), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 158/314 (50%), Gaps = 99/314 (31%)
Query: 16 TYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSD-NEQTNIPNVFAVGDVLHEKPEL 74
T+DTVL AIGR T + AG+ P+N KI D E T++P+++A+GDV +PEL
Sbjct: 301 TFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAEGRPEL 360
Query: 75 TPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIY 134
TP A++AGKLLA RL+G +T MDY NV TTVFTPLEYGCVGLSEE+A L+G +++E+
Sbjct: 361 TPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEV- 419
Query: 135 HAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFF 194
YHAYYKP EF
Sbjct: 420 -------------------------------------------------YHAYYKPLEFT 430
Query: 195 IPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLK 254
+ R+ +CY+K+
Sbjct: 431 VADRDASQCYIKM----------------------------------------------- 443
Query: 255 VVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTI 314
VC R PQ VLG+HF+GPNAGEV QG+A +KCG ++ + TVGIHPT +EE ++ I
Sbjct: 444 -VCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHI 502
Query: 315 TKRSGEDPTPQSCC 328
+KRSG +PT CC
Sbjct: 503 SKRSGLEPTVTGCC 516
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 211 bits (536), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 164/327 (50%), Gaps = 99/327 (30%)
Query: 3 IATGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKID-SDNEQTNIPNV 61
+A + +++ E Y+TV++AIGR A T + + GVK+ + KI +D EQTN+P +
Sbjct: 284 VAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYI 343
Query: 62 FAVGDVLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEK 121
+A+GD+L +K ELTPVA+QAG+LLA RLY T + DY+NV TTVFTPLEYG GLSEEK
Sbjct: 344 YAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEK 403
Query: 122 AEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLK 181
A E +G +N+E+
Sbjct: 404 AVEKFGEENIEV------------------------------------------------ 415
Query: 182 VIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEF 241
YH+Y+ P E+ IP R+ +CY KI
Sbjct: 416 --YHSYFWPLEWTIPSRDNNKCYAKI---------------------------------- 439
Query: 242 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGI 301
+C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+GI
Sbjct: 440 --------------ICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGI 485
Query: 302 HPTLAEEFTRVTITKRSGEDPTPQSCC 328
HP AE FT +++TKRSG CC
Sbjct: 486 HPVCAEVFTTLSVTKRSGASILQAGCC 512
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 210 bits (535), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 164/327 (50%), Gaps = 99/327 (30%)
Query: 3 IATGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKID-SDNEQTNIPNV 61
+A + +++ E Y+TV++AIGR A T + + GVK+ + KI +D EQTN+P +
Sbjct: 290 VAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYI 349
Query: 62 FAVGDVLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEK 121
+A+GD+L +K ELTPVA+QAG+LLA RLY T + DY+NV TTVFTPLEYG GLSEEK
Sbjct: 350 YAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEK 409
Query: 122 AEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLK 181
A E +G +N+E+
Sbjct: 410 AVEKFGEENIEV------------------------------------------------ 421
Query: 182 VIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEF 241
YH+Y+ P E+ IP R+ +CY KI
Sbjct: 422 --YHSYFWPLEWTIPSRDNNKCYAKI---------------------------------- 445
Query: 242 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGI 301
+C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+GI
Sbjct: 446 --------------ICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGI 491
Query: 302 HPTLAEEFTRVTITKRSGEDPTPQSCC 328
HP AE FT +++TKRSG CC
Sbjct: 492 HPVCAEVFTTLSVTKRSGASILQAGCC 518
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 162/325 (49%), Gaps = 99/325 (30%)
Query: 4 ATGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKID-SDNEQTNIPNVF 62
A + ++ ED ++TVL+A+GR + T + GVK+ + KI +D EQTN+P ++
Sbjct: 271 AKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIY 330
Query: 63 AVGDVLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKA 122
A+GD+L K ELTPVA+QAG+LLA RLYG T + DY NV TTVFTPLEYGC GLSEEKA
Sbjct: 331 AIGDILEGKLELTPVAIQAGRLLAQRLYGGSTVKCDYDNVPTTVFTPLEYGCCGLSEEKA 390
Query: 123 EELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLKV 182
E +G +N+E+
Sbjct: 391 VEKFGEENIEV------------------------------------------------- 401
Query: 183 IYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFF 242
YH+++ P E+ +P R+ +CY K
Sbjct: 402 -YHSFFWPLEWTVPSRDNNKCYAK------------------------------------ 424
Query: 243 IPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIH 302
V+C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+GIH
Sbjct: 425 ------------VICNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGIH 472
Query: 303 PTLAEEFTRVTITKRSGEDPTPQSC 327
P AE FT +++TKRSG D C
Sbjct: 473 PVCAEIFTTLSVTKRSGGDILQSGC 497
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 207 bits (527), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 163/326 (50%), Gaps = 99/326 (30%)
Query: 3 IATGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKID-SDNEQTNIPNV 61
+A + +++ E Y+TV++AIGR A T + + GVK+ + KI +D EQTN+P +
Sbjct: 292 VAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYI 351
Query: 62 FAVGDVLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEK 121
+A+GD+L +K ELTPVA+QAG+LLA RLY T + DY+NV TTVFTPLEYG GLSEEK
Sbjct: 352 YAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEK 411
Query: 122 AEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLK 181
A E +G +N+E+
Sbjct: 412 AVEKFGEENIEV------------------------------------------------ 423
Query: 182 VIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEF 241
YH+Y+ P E+ IP R+ +CY KI
Sbjct: 424 --YHSYFWPLEWTIPSRDNNKCYAKI---------------------------------- 447
Query: 242 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGI 301
+C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+GI
Sbjct: 448 --------------ICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGI 493
Query: 302 HPTLAEEFTRVTITKRSGEDPTPQSC 327
HP AE FT +++TKRSG C
Sbjct: 494 HPVCAEVFTTLSVTKRSGASILQAGC 519
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 163/327 (49%), Gaps = 99/327 (30%)
Query: 3 IATGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKID-SDNEQTNIPNV 61
+A + +++ E Y+TV++AIGR A T + + GVK+ + KI +D EQTN+P +
Sbjct: 290 VAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYI 349
Query: 62 FAVGDVLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEK 121
+A+GD+L +K ELTPVA+QAG+LLA RLY T + DY+NV TTVFTPLEYG GLSEEK
Sbjct: 350 YAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEK 409
Query: 122 AEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLK 181
A E +G +N+E+
Sbjct: 410 AVEKFGEENIEV------------------------------------------------ 421
Query: 182 VIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEF 241
YH+Y+ P E+ IP R+ +CY KI
Sbjct: 422 --YHSYFWPLEWTIPSRDNNKCYAKI---------------------------------- 445
Query: 242 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGI 301
+C ++V+G H +GPNAGEV QG+AAA+KCGLT + L+ST+GI
Sbjct: 446 --------------ICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGI 491
Query: 302 HPTLAEEFTRVTITKRSGEDPTPQSCC 328
HP AE FT +++TKRSG C
Sbjct: 492 HPVCAEVFTTLSVTKRSGASILQAGSC 518
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/309 (38%), Positives = 156/309 (50%), Gaps = 99/309 (32%)
Query: 16 TYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSD-NEQTNIPNVFAVGDVLHEKPEL 74
T+DTVL AIGR T + AG+ P+N KI D E T++P+++A+GDV +PEL
Sbjct: 275 TFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAEGRPEL 334
Query: 75 TPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIY 134
TP A++AGKLLA RL+G +T MDY NV TTVFTPLEYGCVGLSEE+A L+G +++E+
Sbjct: 335 TPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEV- 393
Query: 135 HAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFF 194
YHAYYKP EF
Sbjct: 394 -------------------------------------------------YHAYYKPLEFT 404
Query: 195 IPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLK 254
+ R+ +CY+K+
Sbjct: 405 VADRDASQCYIKM----------------------------------------------- 417
Query: 255 VVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTI 314
VC R PQ VLG+HF+GPNAGEV QG+A +KCG ++ + TVGIHPT +EE ++ I
Sbjct: 418 -VCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHI 476
Query: 315 TKRSGEDPT 323
+KRSG +PT
Sbjct: 477 SKRSGLEPT 485
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 181 bits (460), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 145/318 (45%), Gaps = 98/318 (30%)
Query: 11 KVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHE 70
K FE+ ++TV+ A+GR + GVK+ + +D+EQT + NV+A+GD+
Sbjct: 378 KKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAG 437
Query: 71 KPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADN 130
KP+LTPVA+QAG+ LA RL+ T DY NVATTVFTPLEYG GLSEE A E YG +
Sbjct: 438 KPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKD 497
Query: 131 LEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKP 190
+E+ YH+ +KP
Sbjct: 498 IEV--------------------------------------------------YHSNFKP 507
Query: 191 TEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQR 250
E+ + R CY+K+
Sbjct: 508 LEWTVAHREDNVCYMKL------------------------------------------- 524
Query: 251 CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFT 310
VC ++ +VLG+H +GPNAGE+ QGYA A+K G T + T+GIHPT +E FT
Sbjct: 525 -----VCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFT 579
Query: 311 RVTITKRSGEDPTPQSCC 328
+ +TK+SG P CC
Sbjct: 580 TLHVTKKSGVSPIVSGCC 597
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 144/317 (45%), Gaps = 98/317 (30%)
Query: 11 KVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHE 70
K FE+ ++TV+ A+GR + GVK+ + +D+EQT + NV+A+GD+
Sbjct: 378 KKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAG 437
Query: 71 KPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADN 130
KP+LTPVA+QAG+ LA RL+ T DY NVATTVFTPLEYG GLSEE A E YG +
Sbjct: 438 KPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKD 497
Query: 131 LEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKP 190
+E+ YH+ +KP
Sbjct: 498 IEV--------------------------------------------------YHSNFKP 507
Query: 191 TEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQR 250
E+ + R CY+K+
Sbjct: 508 LEWTVAHREDNVCYMKL------------------------------------------- 524
Query: 251 CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFT 310
VC ++ +VLG+H +GPNAGE+ QGYA A+K G T + T+GIHPT +E FT
Sbjct: 525 -----VCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFT 579
Query: 311 RVTITKRSGEDPTPQSC 327
+ +TK+SG P C
Sbjct: 580 TLHVTKKSGVSPIVSGC 596
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 144/317 (45%), Gaps = 98/317 (30%)
Query: 11 KVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHE 70
K FE+ ++TV+ A+GR + GVK+ + +D+EQT + NV+A+GD+
Sbjct: 378 KKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAG 437
Query: 71 KPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADN 130
KP+LTPVA+QAG+ LA RL+ T DY NVATTVFTPLEYG GLSEE A E YG +
Sbjct: 438 KPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKD 497
Query: 131 LEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKP 190
+E+ YH+ +KP
Sbjct: 498 IEV--------------------------------------------------YHSNFKP 507
Query: 191 TEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQR 250
E+ + R CY+K+
Sbjct: 508 LEWTVAHREDNVCYMKL------------------------------------------- 524
Query: 251 CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFT 310
VC ++ +VLG+H +GPNAGE+ QGYA A+K G T + T+GIHPT +E FT
Sbjct: 525 -----VCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFT 579
Query: 311 RVTITKRSGEDPTPQSC 327
+ +TK+SG P C
Sbjct: 580 TLHVTKKSGVSPIVSGC 596
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 10 DKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGDVL 68
DK E YDTVL AIGR+ + + + + V N KI +D+ TNIP++FAVGDV
Sbjct: 302 DKTSE-LYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVA 360
Query: 69 HEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGA 128
PEL PVA++AG++LA RL+ + MDY + T+++TP+EYG G SEEKA ELYG
Sbjct: 361 ENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGK 420
Query: 129 DNLEIYHAYYKPTEFFIPQR 148
N+E++ + E R
Sbjct: 421 SNVEVFLQEFNNLEISAVHR 440
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 251 CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFT 310
C K+VC + +V+G H++GPNAGEV QG A A++ + + ++ +GIHPT AE F
Sbjct: 459 CLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAESFM 518
Query: 311 RVTITKRSG 319
+ +T SG
Sbjct: 519 NLFVTISSG 527
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 88/142 (61%), Gaps = 6/142 (4%)
Query: 15 DTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPEL 74
D D ++ IGR++ N G+K+ + I + + TN+PN++++GDV+ K EL
Sbjct: 272 DDVDELIWTIGRKSHLG-MGSENVGIKLNSHDQIIADEYQNTNVPNIYSLGDVVG-KVEL 329
Query: 75 TPVAVQAGKLLAARLYG---NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNL 131
TPVA+ AG+ L+ RL+G ++DY+NV + +F+ E G +G+SE++A E YG +N+
Sbjct: 330 TPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENI 389
Query: 132 EIYHAYYKPTEF-FIPQRNPQR 152
++Y++ + + + +++P R
Sbjct: 390 KVYNSKFTAMYYAMLSEKSPTR 411
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 229 LKIYHAYYKPTEF-FIPQRNPQRCYLKVVCERAAP-QKVLGMHFIGPNAGEVIQGYAAAV 286
+K+Y++ + + + +++P R K+VC A P +KV+G+H +G ++ E++QG+ A+
Sbjct: 389 IKVYNSKFTAMYYAMLSEKSPTR--YKIVC--AGPNEKVVGLHIVGDSSAEILQGFGVAI 444
Query: 287 KCGLTFETLESTVGIHPTLAEEFT 310
K G T ++ V IHPT AEE
Sbjct: 445 KMGATKADFDNCVAIHPTSAEELV 468
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Query: 8 SMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQ-TNIPNVFAVGD 66
+ D + +D+V+ A+GR T + + AG++V N + +D Q TN+P V+A+GD
Sbjct: 244 AQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEV-QSNGMVPTDAYQNTNVPGVYALGD 302
Query: 67 VLHEKPELTPVAVQAGKLLAARLY-GNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEEL 125
+ + +LTPVA+ AG+ LA RL+ G ++DY N+ T VF VGLSE +A E
Sbjct: 303 ITG-RDQLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARER 361
Query: 126 YGADNLEIYHAYYKPTEFFIPQRNPQ 151
G D L +Y + P + + + P+
Sbjct: 362 LG-DVLTVYETSFTPMRYALNEHGPK 386
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAP-QKVLGMHFIGPNAGEVIQGYAAAVK 287
L +Y + P + + + P + +K+VC A P Q+V+G+H IG A E++QG+A AVK
Sbjct: 366 LTVYETSFTPMRYALNEHGP-KTAMKLVC--AGPEQRVVGVHVIGDGADEMLQGFAVAVK 422
Query: 288 CGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQSCC 328
G T ++TV IHP AEE + R DP P+
Sbjct: 423 MGATKADFDNTVAIHPGSAEELVTLKEPVRRPGDPLPEGAA 463
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D +L AIGR T++ +++ G++ + I + + TN+ ++AVGDV K LTPV
Sbjct: 283 DXLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPV 341
Query: 78 AVQAGKLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHA 136
A+ AG+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y
Sbjct: 342 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYST 401
Query: 137 YYKPTEFFIPQRNPQRCYLKFI 158
+ P + +R +C +K +
Sbjct: 402 SFTPMYHAVTKRK-TKCVMKMV 422
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+K Y + P + +R +C +K+V +KV+G+H G E++QG+A AVK
Sbjct: 396 VKTYSTSFTPMYHAVTKRK-TKCVMKMVXANK-EEKVVGIHMQGLGCDEMLQGFAVAVKM 453
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G T ++TV IHPT +EE
Sbjct: 454 GATKADFDNTVAIHPTSSEEL 474
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D +L AIGR T++ +++ G++ + I + + TN+ ++AVGDV K LTPV
Sbjct: 282 DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPV 340
Query: 78 AVQAGKLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHA 136
A+ AG+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y
Sbjct: 341 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYST 400
Query: 137 YYKPTEFFIPQRNPQRCYLKFI 158
+ P + +R +C +K +
Sbjct: 401 SFTPMYHAVTKRK-TKCVMKMV 421
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+K Y + P + +R +C +K+VC +KV+G+H G E++QG+A AVK
Sbjct: 395 VKTYSTSFTPMYHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKM 452
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G T ++TV IHPT +EE
Sbjct: 453 GATKADFDNTVAIHPTSSEEL 473
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D +L AIGR T++ +++ G++ + I + + TN+ ++AVGDV K LTPV
Sbjct: 283 DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPV 341
Query: 78 AVQAGKLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHA 136
A+ AG+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y
Sbjct: 342 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYST 401
Query: 137 YYKPTEFFIPQRNPQRCYLKFI 158
+ P + +R +C +K +
Sbjct: 402 SFTPMYHAVTKRK-TKCVMKMV 422
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+K Y + P + +R +C +K+VC +KV+G+H G E++QG+A AVK
Sbjct: 396 VKTYSTSFTPMYHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKM 453
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G T ++TV IHPT +EE
Sbjct: 454 GATKADFDNTVAIHPTSSEEL 474
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D +L AIGR T++ +++ G++ + I + + TN+ ++AVGDV K LTPV
Sbjct: 284 DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPV 342
Query: 78 AVQAGKLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHA 136
A+ AG+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y
Sbjct: 343 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYST 402
Query: 137 YYKPTEFFIPQRNPQRCYLKFI 158
+ P + +R +C +K +
Sbjct: 403 SFTPMYHAVTKRK-TKCVMKMV 423
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+K Y + P + +R +C +K+VC +KV+G+H G E++QG+A AVK
Sbjct: 397 VKTYSTSFTPMYHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKM 454
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G T ++TV IHPT +EE
Sbjct: 455 GATKADFDNTVAIHPTSSEEL 475
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D +L AIGR T++ +++ G++ + I + + TN+ ++AVGDV K LTPV
Sbjct: 268 DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPV 326
Query: 78 AVQAGKLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHA 136
A+ AG+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y
Sbjct: 327 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYST 386
Query: 137 YYKPTEFFIPQRNPQRCYLKFI 158
+ P + +R +C +K +
Sbjct: 387 SFTPMYHAVTKRK-TKCVMKMV 407
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+K Y + P + +R +C +K+VC +KV+G+H G E++QG+A AVK
Sbjct: 381 VKTYSTSFTPMYHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKM 438
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G T ++TV IHPT +EE
Sbjct: 439 GATKADFDNTVAIHPTSSEEL 459
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D +L AIGR T++ +++ G++ + I + + TN+ ++AVGDV K LTPV
Sbjct: 266 DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPV 324
Query: 78 AVQAGKLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHA 136
A+ AG+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y
Sbjct: 325 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYST 384
Query: 137 YYKPTEFFIPQRNPQRCYLKFI 158
+ P + +R +C +K +
Sbjct: 385 SFTPMYHAVTKRK-TKCVMKMV 405
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+K Y + P + +R +C +K+VC +KV+G+H G E++QG+A AVK
Sbjct: 379 VKTYSTSFTPMYHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKM 436
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G T ++TV IHPT +EE
Sbjct: 437 GATKADFDNTVAIHPTSSEEL 457
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D +L AIGR T++ +++ G++ + I + + TN+ ++AVGDV K LTPV
Sbjct: 283 DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPV 341
Query: 78 AVQAGKLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHA 136
A+ AG+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y
Sbjct: 342 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYST 401
Query: 137 YYKPTEFFIPQRNPQRCYLKFI 158
+ P + +R +C +K +
Sbjct: 402 SFTPMYHAVTKRK-TKCVMKMV 422
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+K Y + P + +R +C +K+VC +KV+G+H G E++QG+A AVK
Sbjct: 396 VKTYSTSFTPMYHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKM 453
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G T ++TV IHPT +EE
Sbjct: 454 GATKADFDNTVAIHPTSSEEL 474
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D +L AIGR T++ +++ G++ + I + + TN+ ++AVGDV K LTPV
Sbjct: 283 DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPV 341
Query: 78 AVQAGKLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHA 136
A+ AG+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y
Sbjct: 342 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYST 401
Query: 137 YYKPTEFFIPQRNPQRCYLKFI 158
+ P + +R +C +K +
Sbjct: 402 SFTPMYHAVTKRK-TKCVMKMV 422
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+K Y + P + +R +C +K+VC +KV+G+H G E++QG+A AVK
Sbjct: 396 VKTYSTSFTPMYHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKM 453
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G T ++TV IHPT +EE
Sbjct: 454 GATKADFDNTVAIHPTSSEEL 474
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D +L AIGR T++ +++ G++ + I + + TN+ ++AVGDV K LTPV
Sbjct: 283 DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPV 341
Query: 78 AVQAGKLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHA 136
A+ AG+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y
Sbjct: 342 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYST 401
Query: 137 YYKPTEFFIPQRNPQRCYLKFI 158
+ P + +R +C +K +
Sbjct: 402 SFTPMYHAVTKRK-TKCVMKMV 422
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+K Y + P + +R +C +K+VC +KV+G+H G E++QG+A AVK
Sbjct: 396 VKTYSTSFTPMYHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKM 453
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G T ++TV IHPT +EE
Sbjct: 454 GATKADFDNTVAIHPTSSEEL 474
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D +L AIGR T++ +++ G++ + I + + TN+ ++AVGDV K LTPV
Sbjct: 266 DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPV 324
Query: 78 AVQAGKLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHA 136
A+ AG+ LA RL+ +++DY N+ T VF+ G VGL+E++A YG +N++ Y
Sbjct: 325 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYST 384
Query: 137 YYKPTEFFIPQRNPQRCYLKFI 158
+ P + +R +C +K +
Sbjct: 385 SFTPMYHAVTKRK-TKCVMKMV 405
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+K Y + P + +R +C +K+VC +KV+G+H G E++QG+A AVK
Sbjct: 379 VKTYSTSFTPMYHAVTKRK-TKCVMKMVCANK-EEKVVGIHMQGLGCDEMLQGFAVAVKM 436
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G T ++TV IHPT +EE
Sbjct: 437 GATKADFDNTVAIHPTSSEEL 457
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Query: 5 TGASMDKVFED----TYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPN 60
T S+ ED T D ++ AIGR + + AGVK + + + TNI
Sbjct: 238 TDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEG 297
Query: 61 VFAVGDVLHEKPELTPVAVQAGKLLAARLYGNGTTQ-MDYQNVATTVFTPLEYGCVGLSE 119
++AVGD ELTPVAV AG+ L+ RL+ N + +DY N+ T VF+ G VGL+E
Sbjct: 298 IYAVGDNTG-AVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTE 356
Query: 120 EKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFI 158
+A E YG D +++Y + + + + Q C +K +
Sbjct: 357 PQAREQYGDDQVKVYKSSFTAM-YTAVTTHRQPCRMKLV 394
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 249 QRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEE 308
Q C +K+VC + +K++G+H IG E++QG+A A+K G T + ++TV IHPT AEE
Sbjct: 387 QPCRMKLVC-VGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEE 445
Query: 309 F 309
F
Sbjct: 446 F 446
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Query: 5 TGASMDKVFED----TYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPN 60
T S+ ED T D ++ AIGR + + AGVK + + + TNI
Sbjct: 238 TDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEG 297
Query: 61 VFAVGDVLHEKPELTPVAVQAGKLLAARLYGNGTTQ-MDYQNVATTVFTPLEYGCVGLSE 119
++AVGD ELTPVAV AG+ L+ RL+ N + +DY N+ T VF+ G VGL+E
Sbjct: 298 IYAVGDNTG-AVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTE 356
Query: 120 EKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFI 158
+A E YG D +++Y + + + + Q C +K +
Sbjct: 357 PQAREQYGDDQVKVYKSSFTAM-YTAVTTHRQPCRMKLV 394
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 249 QRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEE 308
Q C +K+VC + +K++G+H IG E++QG+A A+K G T + ++TV IHPT AEE
Sbjct: 387 QPCRMKLVC-VGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEE 445
Query: 309 F 309
F
Sbjct: 446 F 446
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D V+MAIGR T + + N GVK+ P+ + +TN+PN++A+GD+ ++ LTPV
Sbjct: 279 DVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDIT-DRLMLTPV 337
Query: 78 AVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAY 137
A+ G L ++GN + D+ VA+ VF+ G GL EE A + + + + +Y +
Sbjct: 338 AINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEF--EKVAVYMSS 395
Query: 138 YKP 140
+ P
Sbjct: 396 FTP 398
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+ +Y + + P I ++ K+V + VLG+H +G A E+IQ ++
Sbjct: 389 VAVYMSSFTPLMHNISGSKYKKFVAKIVTNHS-DGTVLGVHLLGDGAPEIIQAVGVCLRL 447
Query: 289 GLTFETLESTVGIHPTLAEEF 309
+T+G+HPT AEE
Sbjct: 448 NAKISDFYNTIGVHPTSAEEL 468
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D V+MAIGR T + + N GVK+ P+ + +TN+PN++A+GD+ ++ LTPV
Sbjct: 282 DVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDIT-DRLMLTPV 340
Query: 78 AVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAY 137
A+ G L ++GN + D+ VA+ VF+ G GL EE A + + + + +Y +
Sbjct: 341 AINEGAALVDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKEF--EKVAVYMSS 398
Query: 138 YKP 140
+ P
Sbjct: 399 FTP 401
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+ +Y + + P I ++ K+V + VLG+H +G A E+IQ ++
Sbjct: 392 VAVYMSSFTPLMHNISGSKYKKFVAKIVTNHS-DGTVLGVHLLGDGAPEIIQAVGVCLRL 450
Query: 289 GLTFETLESTVGIHPTLAEEF 309
+T+G+HPT AEE
Sbjct: 451 NAKISDFYNTIGVHPTSAEEL 471
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D V++A GR T + AGVKV A + + TN+ +++AVGDV +LTPV
Sbjct: 278 DRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGH-IQLTPV 336
Query: 78 AVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAY 137
A+ + N +T DY + T VF+ E G VGLSEE A Y +EIY
Sbjct: 337 AIHDAMCFVKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHRY--KRVEIYRTV 394
Query: 138 YKPTEFFIPQRNPQRCYLKFI 158
++P + +P++ ++K +
Sbjct: 395 FRPMRNVLSG-SPEKMFMKLV 414
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
++IY ++P + +P++ ++K+V + + V+G H +G NAGE+ Q ++K
Sbjct: 388 VEIYRTVFRPMRNVLSG-SPEKMFMKLVVD-GESRIVVGAHVLGENAGEIAQLIGISLKG 445
Query: 289 GLTFETLESTVGIHPTLAEEF 309
LT + + T+ +HPT++EE
Sbjct: 446 KLTKDIFDKTMAVHPTMSEEL 466
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 37/178 (20%)
Query: 17 YDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDV--------- 67
+D V+ +GR TE + V+ N + +N++T++ N++AVGD
Sbjct: 264 FDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQRTSVNNIYAVGDCCMVKKSKEI 322
Query: 68 --------------LHEKP----------ELTPVAVQAGKLLAARLYGNGTTQMDYQNVA 103
L++K +LTPVA+ AG+LLA RL+ T + +Y+ +
Sbjct: 323 EDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIP 382
Query: 104 TTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNP---QRCYLKFI 158
T +F+ G +GLSEE A ++YG +N++IY + + F + P ++ YLK +
Sbjct: 383 TVIFSHPPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLV 440
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQ---RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAA 285
+KIY + + F + P+ + YLK+VC + + G+H IG NA E++QG+A A
Sbjct: 410 VKIYESKFTNLFFSVYDIEPELKEKTYLKLVC-VGKDELIKGLHIIGLNADEIVQGFAVA 468
Query: 286 VKCGLTFETLESTVGIHPTLAEEF 309
+K T + + T+ IHPT AEEF
Sbjct: 469 LKMNATKKDFDETIPIHPTAAEEF 492
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 5 TGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAV 64
+G MD +D V+MAIGR T++ + NAGV + ++D + +TN+ N++A+
Sbjct: 272 SGKKMD------FDLVMMAIGRSPRTKDLQLQNAGVMIKNGGVQVD-EYSRTNVSNIYAI 324
Query: 65 GDVLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
GDV + + LTPVA+ L ++G + D+ VA+ VF+ G GL EE A +
Sbjct: 325 GDVTN-RVMLTPVAINEAAALVDTVFGTNPRKTDHTRVASAVFSIPPIGTCGLIEEVASK 383
Query: 125 LYGADNLEIYHAYYKP 140
Y + + +Y + + P
Sbjct: 384 RY--EVVAVYLSSFTP 397
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 250 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 309
+ ++ + + VLG+H +G NA E+IQG +K +T+G+HPT AEE
Sbjct: 408 KTFVAKIITNHSDGTVLGVHLLGDNAPEIIQGVGICLKLNAKISDFYNTIGVHPTSAEEL 467
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 5 TGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAV 64
+G MD +D V+MAIGR T++ + NAGV + ++D + +TN+ N++A+
Sbjct: 272 SGKKMD------FDLVMMAIGRSPRTKDLQLQNAGVMIKNGGVQVD-EYSRTNVSNIYAI 324
Query: 65 GDVLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
GDV + + LTPVA+ L ++G + D+ VA+ VF+ G GL EE A +
Sbjct: 325 GDVTN-RVMLTPVAINEAAALVDTVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASK 383
Query: 125 LYGADNLEIYHAYYKP 140
Y + + +Y + + P
Sbjct: 384 RY--EVVAVYLSSFTP 397
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 250 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 309
+ ++ + + VLG+H +G NA E+IQG +K +T+G+HPT AEE
Sbjct: 408 KTFVAKIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSAEEL 467
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 5 TGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAV 64
+G MD +D V+MAIGR T++ + NAGV + ++D + +TN+ N++A+
Sbjct: 271 SGKKMD------FDLVMMAIGRSPRTKDLQLQNAGVMIKNGGVQVD-EYSRTNVSNIYAI 323
Query: 65 GDVLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
GDV + + LTPVA+ L ++G + D+ VA+ VF+ G GL EE A +
Sbjct: 324 GDVTN-RVMLTPVAINEAAALVDTVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASK 382
Query: 125 LYGADNLEIYHAYYKP 140
Y + + +Y + + P
Sbjct: 383 RY--EVVAVYLSSFTP 396
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 250 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 309
+ ++ + + VLG+H +G NA E+IQG +K +T+G+HPT AEE
Sbjct: 407 KTFVAKIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSAEEL 466
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 5 TGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAV 64
+G MD +D V+MAIGR T++ + NAGV + ++D + +TN+ N++A+
Sbjct: 273 SGKKMD------FDLVMMAIGRSPRTKDLQLQNAGVMIKNGGVQVD-EYSRTNVSNIYAI 325
Query: 65 GDVLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
GDV + + LTPVA+ L ++G + D+ VA+ VF+ G GL EE A +
Sbjct: 326 GDVTN-RVMLTPVAINEAAALVDTVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASK 384
Query: 125 LYGADNLEIYHAYYKP 140
Y + + +Y + + P
Sbjct: 385 RY--EVVAVYLSSFTP 398
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 250 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 309
+ ++ + + VLG+H +G NA E+IQG +K +T+G+HPT AEE
Sbjct: 409 KTFVAKIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVHPTSAEEL 468
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGD 66
A+ K E D V +A+GR T + AGV+ A I +T+ P ++A+GD
Sbjct: 247 ATTXKHGEIVADQVXLALGRXPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGD 306
Query: 67 VLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELY 126
V ++ +LTPVA+ Y N T D+ +AT VF+ E G VG++EE+A +
Sbjct: 307 VT-DRVQLTPVAIHEAXCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKF 365
Query: 127 GADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHA 161
+E+Y A ++P + + R ++ K + +A
Sbjct: 366 --QEIEVYRAEFRPXKATLSGRK-EKTIXKLVVNA 397
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+++Y A ++P + + R + VV AA +KV+G H +G +AGE Q +++
Sbjct: 368 IEVYRAEFRPXKATLSGRKEKTIXKLVV--NAADRKVVGAHILGHDAGEXAQLLGISLRA 425
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G T + + T +HPT AEE
Sbjct: 426 GCTKDDFDRTXAVHPTAAEEL 446
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENA-KIDSDNEQTNIPNVFAVGDVLHEKP 72
E YD V++AIGR ++ + AGV+V A K+D+ +TN+ N++A+GDV ++
Sbjct: 275 EADYDVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDA-YSKTNVDNIYAIGDVT-DRV 332
Query: 73 ELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLE 132
LTPVA+ G ++ N D+ VA VF+ G G EE A + Y D +
Sbjct: 333 MLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVA 390
Query: 133 IYHAYYKPTEFFIPQRNPQRCYLKFI 158
+Y + + P I ++ ++ +
Sbjct: 391 VYESSFTPLMHNISGSTYKKFMVRIV 416
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+ +Y + + P I ++ +++V A + VLG+H +G ++ E+IQ A +K
Sbjct: 389 VAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGE-VLGVHMLGDSSPEIIQSVAICLKM 447
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G +T+G+HPT AEE
Sbjct: 448 GAKISDFYNTIGVHPTSAEEL 468
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENA-KIDSDNEQTNIPNVFAVGDVLHEKP 72
E YD V++AIGR ++ + AGV+V A K+D+ +TN+ N++A+GDV ++
Sbjct: 275 EADYDVVMLAIGRVPRSQTLQLDKAGVEVAKNGAIKVDA-YSKTNVDNIYAIGDVT-DRV 332
Query: 73 ELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLE 132
LTPVA+ G ++ N D+ VA VF+ G G EE A + Y D +
Sbjct: 333 MLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVA 390
Query: 133 IYHAYYKPTEFFIPQRNPQRCYLKFI 158
+Y + + P I ++ ++ +
Sbjct: 391 VYESSFTPLMHNISGSTYKKFMVRIV 416
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+ +Y + + P I ++ +++V A + VLG+H +G ++ E+IQ A +K
Sbjct: 389 VAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGE-VLGVHMLGDSSPEIIQSVAICLKM 447
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G +T+G+HPT AEE
Sbjct: 448 GAKISDFYNTIGVHPTSAEEL 468
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENA-KIDSDNEQTNIPNVFAVGDVLHEKP 72
E YD V++AIGR ++ + AGV+V A K+D+ +TN+ N++A+GDV ++
Sbjct: 274 EADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDA-YSKTNVDNIYAIGDVT-DRV 331
Query: 73 ELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLE 132
LTPVA+ G ++ N D+ VA VF+ G G EE A + Y D +
Sbjct: 332 MLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVA 389
Query: 133 IYHAYYKPTEFFIPQRNPQRCYLKFI 158
+Y + + P I ++ ++ +
Sbjct: 390 VYESSFTPLMHNISGSTYKKFMVRIV 415
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+ +Y + + P I ++ +++V A + VLG+H +G ++ E+IQ A +K
Sbjct: 388 VAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGE-VLGVHMLGDSSPEIIQSVAICLKM 446
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G +T+G+HPT AEE
Sbjct: 447 GAKISDFYNTIGVHPTSAEEL 467
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENA-KIDSDNEQTNIPNVFAVGDVLHEKP 72
E YD V++AIGR ++ + AGV+V A K+D+ +TN+ N++A+GDV ++
Sbjct: 274 EADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDA-YSKTNVDNIYAIGDVT-DRV 331
Query: 73 ELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLE 132
LTPVA+ G ++ N D+ VA VF+ G G EE A + Y D +
Sbjct: 332 MLTPVAINEGAAFVDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKKY--DQVA 389
Query: 133 IYHAYYKPTEFFIPQRNPQRCYLKFI 158
+Y + + P I ++ ++ +
Sbjct: 390 VYESSFTPLMHNISGSTYKKFMVRIV 415
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+ +Y + + P I ++ +++V A + VLG+H +G ++ E+IQ A +K
Sbjct: 388 VAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGE-VLGVHMLGDSSPEIIQSVAICLKM 446
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G + +T+G+HPT AEE
Sbjct: 447 GAKISDVYNTIGVHPTSAEEL 467
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKP 72
E+ YD V++AIGR ++ + AGV+ +N + D +T++ N++A+GDV + +
Sbjct: 295 EEDYDQVMLAIGRVPRSQALQLDKAGVRT-GKNGAVQVDAYSKTSVDNIYAIGDVTN-RV 352
Query: 73 ELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLE 132
LTPVA+ G ++G D+ VA VF+ G G++EE+A + Y + +
Sbjct: 353 MLTPVAINEGAAFVETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAKNY--ETVA 410
Query: 133 IYHAYYKPTEFFIPQRNPQRCYLKFI 158
+Y + + P I + ++ I
Sbjct: 411 VYASSFTPLMHNISGSKHKEFMIRII 436
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+ +Y + + P I + ++++ + + VLG+H +G +A E+IQ +K
Sbjct: 409 VAVYASSFTPLMHNISGSKHKEFMIRIITNESNGE-VLGVHMLGDSAPEIIQSVGICMKM 467
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G ST+G+HPT AEE
Sbjct: 468 GAKISDFHSTIGVHPTSAEEL 488
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKP 72
E+ YD V++AIGR ++ + AGV+ +N + D +T++ N++A+GDV + +
Sbjct: 295 EEDYDQVMLAIGRVPRSQALQLDKAGVRT-GKNGAVQVDAYSKTSVDNIYAIGDVTN-RV 352
Query: 73 ELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLE 132
LTPVA+ G ++G D+ VA VF+ G G++EE+A + Y + +
Sbjct: 353 MLTPVAINEGAAFVETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAKNY--ETVA 410
Query: 133 IYHAYYKPTEFFIPQRNPQRCYLKFI 158
+Y + + P I + ++ I
Sbjct: 411 VYASSFTPLMHNISGSKHKEFMIRII 436
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKC 288
+ +Y + + P I + ++++ + + VLG+H +G +A E+IQ +K
Sbjct: 409 VAVYASSFTPLMHNISGSKHKEFMIRIITNESNGE-VLGVHMLGDSAPEIIQSVGICMKM 467
Query: 289 GLTFETLESTVGIHPTLAEEF 309
G ST+G+HPT AEE
Sbjct: 468 GAKISDFHSTIGVHPTSAEEL 488
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 68/120 (56%), Gaps = 6/120 (5%)
Query: 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPE 73
++T+D +++A+GRR +T + +++GV + D+ +T++P VFA+GDV+
Sbjct: 266 KETFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVR-GAM 324
Query: 74 LTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEI 133
L A + G ++A R+ G+ QM+Y + + ++T E VG K E+ A+ +E+
Sbjct: 325 LAHKASEEGVMVAERIAGH-KAQMNYDLIPSVIYTHPEIAWVG----KTEQTLKAEGVEV 379
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 247 NPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLA 306
N +KV+ + A +VLG+H IGP+A E++Q A ++ G + E L V HPTL+
Sbjct: 396 NDTTGLVKVIAD-AKTDRVLGVHVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLS 454
Query: 307 EEF 309
E
Sbjct: 455 EAL 457
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNE-QTNIPNVFAVGDVLHEKPELTP 76
D VL+A+GRR TE ++ NAG+ E +I D +T +P+++A+GDV+ P L
Sbjct: 254 DRVLVAVGRRPYTEGLSLENAGLST-DERGRIPVDEHLRTRVPHIYAIGDVVR-GPMLAH 311
Query: 77 VAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEK 121
A + G + A G +DYQ + + V+T E VG +EE+
Sbjct: 312 KASEEG-IAAVEHMVRGFGHVDYQAIPSVVYTHPEIAAVGYTEEE 355
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAE 307
++KV+ A ++LG+H IG G+V+ A A+ + E L HP+L+E
Sbjct: 385 FIKVLAH-AKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSE 439
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGD 66
AS K T D +L+ IGRR T+ + G+++ P + QT IPN++A+GD
Sbjct: 261 ASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGD 320
Query: 67 VLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
V+ P L A G + + G G +DY V + ++T E VG SEE+ +E
Sbjct: 321 VV-AGPMLAHKAEDEGIICVEGMAG-GAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKE 376
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTR 311
+K++ +++ +VLG H +GP AGE++ A A++ G + E + HPTL+E F
Sbjct: 403 MVKILGQKS-TDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFRE 461
Query: 312 VTITKRSGE 320
+ G+
Sbjct: 462 ANLAASFGK 470
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGD 66
AS K T D +L+ IGRR T+ + G+++ P + QT IPN++A+GD
Sbjct: 261 ASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGD 320
Query: 67 VLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
V+ P L A G + + G G +DY V + ++T E VG SEE+ +E
Sbjct: 321 VV-AGPMLAHKAEDEGIICVEGMAG-GAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKE 376
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTR 311
+K++ +++ +VLG H +GP AGE++ A A++ G + E + HPTL+E F
Sbjct: 403 MVKILGQKST-DRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFRE 461
Query: 312 VTITKRSGE 320
+ G+
Sbjct: 462 ANLAASFGK 470
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGD 66
AS K T D +L+ IGRR T+ + G+++ P + QT IPN++A+GD
Sbjct: 282 ASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGD 341
Query: 67 VLHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
V+ P L A G + + G G +DY V + ++T E VG SEE+ +E
Sbjct: 342 VV-AGPMLAHKAEDEGIICVEGMAG-GAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKE 397
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 253 LKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRV 312
+K++ +++ +VLG H +GP AGE++ A A++ G + E + HPTL+E F
Sbjct: 425 VKILGQKS-TDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREA 483
Query: 313 TITKRSGE 320
+ G+
Sbjct: 484 NLAASFGK 491
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNE-QTNIPNVFAVGDVLHEKPELTP 76
D VL+ +GRR T+E + G+K + I+ D + +T++PN+FA+GD++ P L
Sbjct: 260 DYVLVTVGRRPNTDELGLEQIGIK-MTNRGLIEVDQQCRTSVPNIFAIGDIV-PGPALAH 317
Query: 77 VAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
A GK+ A + G+ + +DY + VF+ E VG E++A++
Sbjct: 318 KASYEGKVAAEAIAGH-PSAVDYVAIPAVVFSDPECASVGYFEQQAKD 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 247 NPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLA 306
N +LK+V R ++G IGPNA ++I A++ G+T E + T+ HPTL
Sbjct: 386 NDTDGFLKLVV-RKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLG 444
Query: 307 E 307
E
Sbjct: 445 E 445
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 17 YDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNE-QTNIPNVFAVGDVLHEKPELT 75
+D +++A+GRR +T + +++GV + E I D+ T++P V+A+GDV+ L
Sbjct: 269 FDKLIVAVGRRPVTTDLLAADSGV-TLDERGFIYVDDYCATSVPGVYAIGDVVR-GAMLA 326
Query: 76 PVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEE--KAE 123
A + G ++A R+ G+ QM+Y + ++T E VG +E+ KAE
Sbjct: 327 HKASEEGVVVAERIAGH-KAQMNYDLIPAVIYTHPEIAGVGKTEQALKAE 375
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 247 NPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLA 306
N ++KV+ + A +VLG+H IGP+A E++Q A A++ G + E L V HP L+
Sbjct: 396 NDTAGFVKVIAD-AKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALS 454
Query: 307 EEF 309
E
Sbjct: 455 EAL 457
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 23 AIGRRALTEETAVSNAGVKV-----IPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
A+GR+ TE + AGVKV I NA++ +T++P V+A+GD P L
Sbjct: 266 AVGRKPRTEGLGLEKAGVKVDERGFIRVNARM-----ETSVPGVYAIGDAAR-PPLLAHK 319
Query: 78 AVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAE 123
A++ G L+AA + DYQ V + V+T E+ VGL+EE+A+
Sbjct: 320 AMREG-LIAAENAAGKDSAFDYQ-VPSVVYTSPEWAGVGLTEEEAK 363
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 265 VLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 309
+LG+ +GP AGE+I A A++ G T L TV HPTL+E
Sbjct: 403 LLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESL 447
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTR 311
++K++ + + +++LG H IGPNAGE+I A++ G + E + HPTL+E F
Sbjct: 408 FVKILID-SKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKE 466
Query: 312 VTI 314
+
Sbjct: 467 ANM 469
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
+ +L+A+GRR G++V + D + P++ VGDV P L
Sbjct: 277 EVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTF-GPMLAHK 335
Query: 78 AVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
A + G + A + G ++Y N+ + +++ E VG +EE+ +E
Sbjct: 336 AEEEG-IAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKE 381
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNE-QTNIPNVFAVGDVLHEKPELTP 76
+ VL+A GR+ T+ ++ AGV V+ +++ D QT+I V+A+GDV+ P L
Sbjct: 290 EVVLIATGRKPSTDGLGLAKAGV-VLDSRGRVEIDRHFQTSIAGVYAIGDVVR-GPXLAH 347
Query: 77 VAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEK 121
A G +A + G ++Y + V+T E VG +EE+
Sbjct: 348 KAEDEGVAVAEIIAGQ-AGHVNYDVIPGVVYTQPEVASVGKTEEE 391
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 229 LKIYHAYYKPTEFFIPQRNPQRC------YLKVVCERAAPQKVLGMHFIGPNAGEVIQGY 282
LK YK +F R ++K++ ++ +VLG H IG AGE I
Sbjct: 392 LKAAGVAYKIGKFPFTANGRARAXLQTDGFVKILADKE-TDRVLGGHIIGFGAGEXIHEI 450
Query: 283 AAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315
A + G + E L T HPT +E ++
Sbjct: 451 AVLXEFGGSSEDLGRTCHAHPTXSEAVKEAALS 483
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D +L+A GR T A+ AGV V + A + +T+ PN++A GD ++P+ V
Sbjct: 261 DKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCT-DQPQFVYV 319
Query: 78 AVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKA 122
A AG A + G G +D + VFT + VG SE +A
Sbjct: 320 AAAAGTRAAINMTG-GDAALDLTAMPAVVFTDPQVATVGYSEAEA 363
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 250 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 309
R ++K+V E + +++G+ + P AGE+IQ A A++ +T + L + + T+ E
Sbjct: 390 RGFIKLVIEEGS-HRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGL 448
Query: 310 TRVTITKRSGEDPTPQSCC 328
T +D SCC
Sbjct: 449 KLAAQTFN--KDVKQLSCC 465
>pdb|3L8K|A Chain A, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
pdb|3L8K|B Chain B, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
Length = 466
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTP- 76
++V++A GRR + E A G+ + +D + +TNIPNVFA GD L P
Sbjct: 262 NSVVLAAGRRPVIPEGA-REIGLSISKTGIVVD-ETMKTNIPNVFATGDA----NGLAPY 315
Query: 77 --VAVQAGKLLAARLYGNG--TTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLE 132
AV+ A + NG +D +++ T++T VG+ KA ++ +E
Sbjct: 316 YHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKM----GIE 371
Query: 133 IYHAYYKPTEFFIPQRNPQR-CYLKFIYH 160
I A Y E Q Q+ LK I+
Sbjct: 372 IVEAEYNMEEDVSAQIYGQKEGVLKLIFE 400
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 17 YDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNE-QTNIPNVFAVGDVLHEKPELT 75
YD VL+A GR + + AGV V + I+ D + +TN+P+++A+GD++ + P L
Sbjct: 275 YDAVLVAAGRAPNGKLISAEKAGVAVT-DRGFIEVDKQMRTNVPHIYAIGDIVGQ-PMLA 332
Query: 76 PVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAE 123
AV G + A G+ D + + +T E VG +E A+
Sbjct: 333 HKAVHEGHVAAENCAGH-KAYFDARVIPGVAYTSPEVAWVGETELSAK 379
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 17 YDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNE-QTNIPNVFAVGDVLHEKPELT 75
YD VL+A GR + + AGV V + I+ D + +TN+P+++A+GD++ + P L
Sbjct: 275 YDAVLVAAGRAPNGKLISAEKAGVAVT-DRGFIEVDKQMRTNVPHIYAIGDIVGQ-PMLA 332
Query: 76 PVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAE 123
AV G + A G+ D + + +T E VG +E A+
Sbjct: 333 HKAVHEGHVAAENCAGH-KAYFDARVIPGVAYTSPEVAWVGETELSAK 379
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 16 TYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELT 75
T + +L+++GRR T + V D+ +T+IP+V+A+GDV+ + P L
Sbjct: 264 TCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGPMLA 323
Query: 76 PVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEK 121
A G A L G ++Y + ++T E VG SE++
Sbjct: 324 HKAEDEGVACAEILAGK-PGHVNYGVIPAVIYTMPEVASVGKSEDE 368
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 309
++KV+ ++A ++LG+H + AGE+I A++ G + E + T HPT++E
Sbjct: 398 FVKVLVDKAT-DRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEAL 454
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 253 LKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAE 307
+K++ E+ K+LG+H + PNAGE+I A A++ + E + HPT++E
Sbjct: 401 VKIIAEKET-DKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSE 454
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D VL++ GR T + GV+ + ++ TN+ V+A+GDV+ P L
Sbjct: 269 DVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVI-PGPMLAHK 327
Query: 78 AVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
A + G L G +DY V V+T E VG +EE+ +E
Sbjct: 328 AEEDGVACVEYLAGK-VGHVDYDKVPGVVYTNPEVASVGKTEEQVKE 373
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D VL+A+GRR T+ + +K+ ID + QT++ NV+A+GDV E P L
Sbjct: 258 DRVLVAVGRRPRTKGFNLECLDLKMNGAAIAID-ERCQTSMHNVWAIGDVAGE-PMLAHR 315
Query: 78 AVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
A+ G+++A + G + + +A FT E VG + E+A +
Sbjct: 316 AMAQGEMVAEIIAGK-ARRFEPAAIAAVCFTDPEVVVVGKTPEQASQ 361
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAE 307
+++VV R +LG +G E+ +A +++ G E + T+ HPTL E
Sbjct: 388 FVRVVARRD-NHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGE 442
>pdb|3IC9|A Chain A, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|B Chain B, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|C Chain C, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|D Chain D, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h
Length = 492
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 29/127 (22%)
Query: 15 DTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKI-DSDNEQTNIPNVFAVGD------V 67
+++ VL A GR+A ++ + N +++ +N+ + D QT++ ++F GD +
Sbjct: 261 ESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTL 320
Query: 68 LHEKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVA--------TTVFTPLEYGCVGLSE 119
LHE + VA GT Y +A + VFT + VGLS
Sbjct: 321 LHEAADDGKVA--------------GTNAGAYPVIAQGQRRAPLSVVFTEPQVASVGLSL 366
Query: 120 EKAEELY 126
+ E+LY
Sbjct: 367 RQIEDLY 373
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 51/144 (35%), Gaps = 12/144 (8%)
Query: 21 LMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPVAVQ 80
LM IG T + G+++ N +T ++A GD P L VA
Sbjct: 272 LMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLLP-LASVAAM 330
Query: 81 AGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKP 140
G++ G G + + + VA TVFT E VG+ + I
Sbjct: 331 QGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSV-----------IDAGSVAA 379
Query: 141 TEFFIPQRNPQRCYLKFIYHAYYK 164
+P R R + + H + K
Sbjct: 380 RTIMLPLRTNARAKMSEMRHGFVK 403
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 20 VLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPVAV 79
VL AIG E + AGV + A D +TN+ +++A+GDV + +L VA
Sbjct: 263 VLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYXRTNVGHIYAIGDV-NGLLQLAHVAE 321
Query: 80 QAGKLLAARLYGNGT-TQMDYQNVATTVFTPLEYGCVGLSEEKA 122
G + A + G T T D++ + F GL+E++A
Sbjct: 322 AQGVVAAETIAGAETLTLGDHRXLPRATFCQPNVASFGLTEQQA 365
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 309
++K+V + A ++LG H +G + E++ A + LT L V HPT +E
Sbjct: 394 FVKLVAD-AKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTXSEAL 450
>pdb|4EQW|A Chain A, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
pdb|4EQW|B Chain B, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
Length = 437
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 17 YDTVLMAIGRRALTEETAVSNAGVK---VIPENAKIDSDNEQTNIPNVFAVGDVLH---- 69
YD ++ +G ++ SN + IP N K +TN+PN++A+GD+
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKF-----ETNVPNIYAIGDIATSHYR 283
Query: 70 --EKPELTPVAV---QAGKLLAARLYGNGTTQ 96
+ P P+A +A ++A ++ GN T +
Sbjct: 284 HVDLPASVPLAWGAHRAASIVAEQIAGNDTIE 315
>pdb|4EMW|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
pdb|4EMW|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
Length = 436
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 17 YDTVLMAIGRRALTEETAVSNAGVK---VIPENAKIDSDNEQTNIPNVFAVGDVLH---- 69
YD ++ +G ++ SN + IP N K +TN+PN++A+GD+
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKF-----ETNVPNIYAIGDIATSHYR 283
Query: 70 --EKPELTPVAV---QAGKLLAARLYGNGTTQ 96
+ P P+A +A ++A ++ GN T +
Sbjct: 284 HVDLPASVPLAWGAHRAASIVAEQIAGNDTIE 315
>pdb|4EM3|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM3|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM4|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
pdb|4EM4|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
Length = 437
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 17 YDTVLMAIGRRALTEETAVSNAGVK---VIPENAKIDSDNEQTNIPNVFAVGDVLH---- 69
YD ++ +G ++ SN + IP N K +TN+PN++A+GD+
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKF-----ETNVPNIYAIGDIATSHYR 283
Query: 70 --EKPELTPVAV---QAGKLLAARLYGNGTTQ 96
+ P P+A +A ++A ++ GN T +
Sbjct: 284 HVDLPASVPLAWGAHRAASIVAEQIAGNDTIE 315
>pdb|4EQS|A Chain A, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQS|B Chain B, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 17 YDTVLMAIGRRALTEETAVSNAGVK---VIPENAKIDSDNEQTNIPNVFAVGDVLH---- 69
YD ++ +G ++ SN + IP N K +TN+PN++A+GD+
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKF-----ETNVPNIYAIGDIATSHYR 283
Query: 70 --EKPELTPVAV---QAGKLLAARLYGNGTTQ 96
+ P P+A +A ++A ++ GN T +
Sbjct: 284 HVDLPASVPLAWGAHRAASIVAEQIAGNDTIE 315
>pdb|4EQR|A Chain A, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQR|B Chain B, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 17 YDTVLMAIGRRALTEETAVSNAGVK---VIPENAKIDSDNEQTNIPNVFAVGDVLH---- 69
YD ++ +G ++ SN + IP N K +TN+PN++A+GD+
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKF-----ETNVPNIYAIGDIATSHYR 283
Query: 70 --EKPELTPVAV---QAGKLLAARLYGNGTTQ 96
+ P P+A +A ++A ++ GN T +
Sbjct: 284 HVDLPASVPLAWGAHRAASIVAEQIAGNDTIE 315
>pdb|3KD9|A Chain A, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|B Chain B, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|C Chain C, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
Length = 449
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 15/135 (11%)
Query: 1 MRIATGASMDKVFEDT----YDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQT 56
M+I ++KV D + V++A G + E GV++ A ++ QT
Sbjct: 213 MKIEGEERVEKVVTDAGEYKAELVILATGIKPNIE--LAKQLGVRIGETGAIWTNEKMQT 270
Query: 57 NIPNVFAVGDVLHEKPELT---------PVAVQAGKLLAARLYGNGTTQMDYQNVATTVF 107
++ NV+A GDV + +T P + G + + + G A T F
Sbjct: 271 SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKF 330
Query: 108 TPLEYGCVGLSEEKA 122
+E G GL+E +A
Sbjct: 331 MDVEIGKTGLTEMEA 345
>pdb|1YQZ|A Chain A, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
pdb|1YQZ|B Chain B, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
Length = 438
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 17 YDTVLMAIGRRALTEETAVSNAGVK---VIPENAKIDSDNEQTNIPNVFAVGDVLH---- 69
YD ++ +G ++ SN + IP N K +TN+PN++A+GD+
Sbjct: 230 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKF-----ETNVPNIYAIGDIATSHYR 284
Query: 70 --EKPELTPVAV---QAGKLLAARLYGNGTTQ 96
+ P P+A +A ++A ++ GN T +
Sbjct: 285 HVDLPASVPLAWGAHRAASIVAEQIAGNDTIE 316
>pdb|4EQX|A Chain A, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQX|B Chain B, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 17 YDTVLMAIGRRALTEETAVSNAGVK---VIPENAKIDSDNEQTNIPNVFAVGDVLH---- 69
YD ++ +G ++ SN + IP N K +TN+PN++A+GD+
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKF-----ETNVPNIYAIGDIATSHYR 283
Query: 70 --EKPELTPVAV---QAGKLLAARLYGNGTTQ 96
+ P P+A +A ++A ++ GN T +
Sbjct: 284 HVDLPASVPLAWGAHRAASIVAEQIAGNDTIE 315
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 20 VLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPVAV 79
VL AIG E + AGV + A D +TN+ +++A+GDV + +L VA
Sbjct: 265 VLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIYAIGDV-NGLLQLAHVAE 323
Query: 80 QAGKLLAARLYGNGT-TQMDYQNVATTVFTPLEYGCVGLSEEKA 122
G + A + G T T D++ + F GL+E++A
Sbjct: 324 AQGVVAAETIAGAETLTLGDHRMLPRATFCQPNVASFGLTEQQA 367
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEF 309
++K+V + A ++LG H +G + E++ A + LT L V HPT++E
Sbjct: 396 FVKLVAD-AKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEAL 452
>pdb|2BC1|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BC1|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BCP|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
pdb|2BCP|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
Length = 490
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 16/137 (11%)
Query: 2 RIATGASMDKVFED----TYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTN 57
+A ++K+ D D V++A+G R T + N + + A + + ++T+
Sbjct: 261 EVAGNGKVEKIITDKNEYDVDMVILAVGFRP---NTTLGNGKIDLFRNGAFLVNKRQETS 317
Query: 58 IPNVFAVGD--VLHEKP-------ELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFT 108
IP V+A+GD +++ L AV+ G + A G + Q
Sbjct: 318 IPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIY 377
Query: 109 PLEYGCVGLSEEKAEEL 125
L GL+ EKA+ L
Sbjct: 378 GLHMVSTGLTLEKAKRL 394
>pdb|2BC0|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
pdb|2BC0|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
Length = 490
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 16/137 (11%)
Query: 2 RIATGASMDKVFED----TYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTN 57
+A ++K+ D D V++A+G R T + N + + A + + ++T+
Sbjct: 261 EVAGNGKVEKIITDKNEYDVDMVILAVGFRP---NTTLGNGKIDLFRNGAFLVNKRQETS 317
Query: 58 IPNVFAVGD--VLHEKP-------ELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFT 108
IP V+A+GD +++ L AV+ G + A G + Q
Sbjct: 318 IPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIY 377
Query: 109 PLEYGCVGLSEEKAEEL 125
L GL+ EKA+ L
Sbjct: 378 GLHMVSTGLTLEKAKRL 394
>pdb|3NTD|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
pdb|3NTD|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
Length = 565
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 17/119 (14%)
Query: 18 DTVLMAIGRR---ALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPEL 74
D ++MAIG R L + ++ + I NA + QT+ P ++AVGD + E+ +
Sbjct: 257 DLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMM-----QTSDPAIYAVGDAVEEQDFV 311
Query: 75 T------PVAVQA---GKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEE 124
T P+A A G++ A ++G Q A L G G +E++ ++
Sbjct: 312 TGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVFDLAVGATGKNEKQLKQ 370
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 18 DTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPV 77
D V + +G + + E A G+ + P+ + ++ QT++PNV+AVGD++ E+
Sbjct: 306 DFVFLGLGEQPRSAELA-KILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIGGPMEMFK- 363
Query: 78 AVQAGKLLAARLYGNGTTQMDY--QNVATTVFTPLEYGCVGLSEEKA 122
A ++G A + G ++ Y +N + T E +G+ EE+A
Sbjct: 364 ARKSGCYAARNVMGE---KISYTPKNYPDFLHTHYEVSFLGMGEEEA 407
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETL 295
+ K+V + A +KVLG H +G A + Q +K GLT + L
Sbjct: 452 FQKIVID-AKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTVDEL 494
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,444,146
Number of Sequences: 62578
Number of extensions: 450593
Number of successful extensions: 1253
Number of sequences better than 100.0: 86
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 989
Number of HSP's gapped (non-prelim): 202
length of query: 332
length of database: 14,973,337
effective HSP length: 99
effective length of query: 233
effective length of database: 8,778,115
effective search space: 2045300795
effective search space used: 2045300795
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)