Query psy3825
Match_columns 332
No_of_seqs 300 out of 2119
Neff 4.9
Searched_HMMs 29240
Date Fri Aug 16 18:19:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3825.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3825hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b1b_A TRXR, thioredoxin reduc 100.0 1E-44 3.6E-49 368.7 22.5 239 7-330 298-538 (542)
2 3qfa_A Thioredoxin reductase 1 100.0 7.4E-42 2.5E-46 342.3 23.2 219 13-329 300-519 (519)
3 3dgh_A TRXR-1, thioredoxin red 100.0 7.6E-42 2.6E-46 337.0 21.9 209 12-321 273-483 (483)
4 3dgz_A Thioredoxin reductase 2 100.0 1.4E-41 4.8E-46 336.0 22.1 214 14-325 273-487 (488)
5 3dk9_A Grase, GR, glutathione 100.0 2.9E-39 9.8E-44 317.8 23.3 197 13-311 278-476 (478)
6 4dna_A Probable glutathione re 100.0 3.1E-39 1.1E-43 316.8 22.0 202 7-313 247-450 (463)
7 3urh_A Dihydrolipoyl dehydroge 100.0 1.7E-38 5.9E-43 313.7 23.8 199 12-315 284-483 (491)
8 2x8g_A Thioredoxin glutathione 100.0 7.2E-39 2.5E-43 324.0 21.4 221 10-329 375-598 (598)
9 3lad_A Dihydrolipoamide dehydr 100.0 2.1E-38 7.3E-43 310.9 23.8 198 13-315 265-463 (476)
10 3o0h_A Glutathione reductase; 100.0 1.1E-38 3.6E-43 315.2 20.2 203 7-313 267-470 (484)
11 3ic9_A Dihydrolipoamide dehydr 100.0 3.3E-38 1.1E-42 313.5 23.7 201 13-315 259-465 (492)
12 1fec_A Trypanothione reductase 100.0 9.1E-39 3.1E-43 317.4 19.4 217 7-327 267-486 (490)
13 2wpf_A Trypanothione reductase 100.0 1.4E-38 4.7E-43 316.9 20.1 220 7-330 271-493 (495)
14 3l8k_A Dihydrolipoyl dehydroge 100.0 7.3E-38 2.5E-42 307.8 23.5 199 13-317 257-458 (466)
15 1ges_A Glutathione reductase; 100.0 4.5E-38 1.5E-42 308.5 20.2 203 7-311 244-448 (450)
16 2hqm_A GR, grase, glutathione 100.0 8.7E-38 3E-42 308.7 22.0 205 7-314 263-472 (479)
17 1xdi_A RV3303C-LPDA; reductase 100.0 1.3E-37 4.4E-42 308.5 22.9 216 7-329 258-474 (499)
18 2r9z_A Glutathione amide reduc 100.0 4.9E-38 1.7E-42 309.7 19.7 215 7-324 242-459 (463)
19 1ojt_A Surface protein; redox- 100.0 1.7E-37 5.8E-42 306.4 22.1 199 12-315 270-469 (482)
20 4eqs_A Coenzyme A disulfide re 100.0 1.3E-37 4.5E-42 305.4 19.6 201 6-314 218-431 (437)
21 1onf_A GR, grase, glutathione 100.0 8.3E-37 2.8E-41 303.6 22.4 211 7-315 253-498 (500)
22 2a8x_A Dihydrolipoyl dehydroge 100.0 8.6E-37 2.9E-41 299.1 21.7 200 12-315 255-456 (464)
23 1zmd_A Dihydrolipoyl dehydroge 100.0 1.4E-36 4.8E-41 298.3 22.5 201 10-315 264-465 (474)
24 2qae_A Lipoamide, dihydrolipoy 100.0 2.3E-36 8E-41 296.3 22.9 198 13-315 261-460 (468)
25 1ebd_A E3BD, dihydrolipoamide 100.0 2.1E-36 7.1E-41 295.7 22.5 199 11-314 253-452 (455)
26 1dxl_A Dihydrolipoamide dehydr 100.0 2.6E-36 8.9E-41 295.2 22.7 199 12-315 263-462 (470)
27 2eq6_A Pyruvate dehydrogenase 100.0 1.5E-35 5E-40 291.7 22.4 196 14-315 257-453 (464)
28 1v59_A Dihydrolipoamide dehydr 100.0 2.6E-35 8.7E-40 289.2 23.0 200 11-315 270-470 (478)
29 1mo9_A ORF3; nucleotide bindin 100.0 1.7E-35 5.7E-40 296.2 21.8 221 7-317 294-518 (523)
30 1zk7_A HGII, reductase, mercur 100.0 9.4E-35 3.2E-39 284.9 25.0 210 12-329 255-466 (467)
31 3kd9_A Coenzyme A disulfide re 100.0 3.1E-35 1.1E-39 287.0 19.0 200 10-315 226-436 (449)
32 1lvl_A Dihydrolipoamide dehydr 100.0 5.8E-34 2E-38 279.9 22.4 197 13-315 253-450 (458)
33 2yqu_A 2-oxoglutarate dehydrog 100.0 1.3E-33 4.6E-38 275.8 23.0 203 8-315 244-447 (455)
34 3iwa_A FAD-dependent pyridine 100.0 4E-34 1.4E-38 280.8 19.3 203 7-315 237-453 (472)
35 3oc4_A Oxidoreductase, pyridin 100.0 3.7E-34 1.3E-38 280.0 15.6 198 7-315 224-434 (452)
36 3ics_A Coenzyme A-disulfide re 100.0 1.2E-32 4.1E-37 277.6 19.1 201 6-312 260-473 (588)
37 3ntd_A FAD-dependent pyridine 100.0 1.1E-32 3.8E-37 274.8 18.4 201 7-313 246-458 (565)
38 2cdu_A NADPH oxidase; flavoenz 100.0 2.3E-32 7.7E-37 267.0 17.7 198 11-315 230-439 (452)
39 3cgb_A Pyridine nucleotide-dis 100.0 1.1E-31 3.7E-36 265.2 21.5 198 12-315 266-475 (480)
40 1nhp_A NADH peroxidase; oxidor 100.0 8.8E-32 3E-36 262.5 17.6 198 11-315 229-438 (447)
41 2bc0_A NADH oxidase; flavoprot 100.0 2E-31 6.7E-36 264.0 19.5 200 11-316 274-485 (490)
42 2v3a_A Rubredoxin reductase; a 99.8 3.5E-21 1.2E-25 183.8 11.3 107 7-119 222-333 (384)
43 3klj_A NAD(FAD)-dependent dehy 99.8 1.8E-20 6.2E-25 181.4 10.7 163 12-311 215-384 (385)
44 1xhc_A NADH oxidase /nitrite r 99.8 6E-20 2.1E-24 176.0 8.3 107 6-120 213-325 (367)
45 1q1r_A Putidaredoxin reductase 99.8 2E-18 6.7E-23 168.6 14.2 171 6-305 228-411 (431)
46 2gqw_A Ferredoxin reductase; f 99.8 1.4E-17 4.8E-22 161.2 17.5 105 6-117 217-333 (408)
47 3ef6_A Toluene 1,2-dioxygenase 99.7 2.2E-15 7.6E-20 145.6 17.3 106 6-119 219-335 (410)
48 3lxd_A FAD-dependent pyridine 99.6 4.8E-15 1.6E-19 142.8 16.9 106 6-119 229-347 (415)
49 3fg2_P Putative rubredoxin red 99.6 6.1E-15 2.1E-19 141.8 15.0 106 6-119 219-336 (404)
50 4a5l_A Thioredoxin reductase; 99.5 2.9E-14 1E-18 129.7 8.5 77 9-90 231-308 (314)
51 4gcm_A TRXR, thioredoxin reduc 99.5 5.2E-14 1.8E-18 129.1 8.8 78 9-90 224-302 (312)
52 4fk1_A Putative thioredoxin re 99.5 3.8E-14 1.3E-18 130.3 5.6 82 6-90 214-296 (304)
53 3cty_A Thioredoxin reductase; 99.4 2.7E-13 9.3E-18 124.4 8.6 76 13-91 237-313 (319)
54 2q0l_A TRXR, thioredoxin reduc 99.4 3.8E-13 1.3E-17 122.5 9.2 76 13-91 226-306 (311)
55 3r9u_A Thioredoxin reductase; 99.4 3.4E-13 1.2E-17 121.8 8.1 77 13-90 229-308 (315)
56 3vrd_B FCCB subunit, flavocyto 99.4 3.7E-13 1.3E-17 128.1 8.6 108 6-119 236-352 (401)
57 3fbs_A Oxidoreductase; structu 99.4 2.8E-13 9.7E-18 121.4 7.0 82 6-90 204-288 (297)
58 2q7v_A Thioredoxin reductase; 99.4 9.6E-13 3.3E-17 121.0 8.8 75 13-91 234-309 (325)
59 3f8d_A Thioredoxin reductase ( 99.4 6.7E-13 2.3E-17 120.0 7.3 76 12-90 235-313 (323)
60 3lzw_A Ferredoxin--NADP reduct 99.4 1.4E-12 4.7E-17 118.7 9.2 76 12-91 234-312 (332)
61 1fl2_A Alkyl hydroperoxide red 99.3 2E-12 6.7E-17 117.7 9.0 75 13-91 227-302 (310)
62 2ywl_A Thioredoxin reductase r 99.3 1.1E-12 3.8E-17 111.5 6.9 77 7-91 90-168 (180)
63 2zbw_A Thioredoxin reductase; 99.3 2.9E-12 1E-16 117.8 8.7 75 13-91 237-314 (335)
64 3itj_A Thioredoxin reductase 1 99.3 3E-12 1E-16 116.8 8.6 75 12-90 255-331 (338)
65 4a9w_A Monooxygenase; baeyer-v 99.3 4.7E-12 1.6E-16 115.7 8.8 82 6-91 263-349 (357)
66 1m6i_A Programmed cell death p 99.3 3.7E-12 1.3E-16 126.6 8.5 91 7-104 261-361 (493)
67 1gte_A Dihydropyrimidine dehyd 99.3 5.5E-13 1.9E-17 144.2 2.6 107 13-121 427-537 (1025)
68 1vdc_A NTR, NADPH dependent th 99.3 7.5E-12 2.6E-16 114.9 9.0 76 11-90 242-319 (333)
69 3ab1_A Ferredoxin--NADP reduct 99.3 8.1E-12 2.8E-16 116.7 9.3 75 13-91 248-325 (360)
70 2a87_A TRXR, TR, thioredoxin r 99.3 6.6E-12 2.3E-16 116.4 7.8 75 12-90 236-312 (335)
71 2vdc_G Glutamate synthase [NAD 99.3 5E-12 1.7E-16 125.4 7.1 78 12-91 362-441 (456)
72 4g6h_A Rotenone-insensitive NA 99.2 1.1E-11 3.6E-16 124.3 8.1 76 13-90 317-397 (502)
73 1trb_A Thioredoxin reductase; 99.2 2.5E-11 8.5E-16 110.6 9.2 75 11-90 230-310 (320)
74 1hyu_A AHPF, alkyl hydroperoxi 99.2 4.7E-11 1.6E-15 119.6 9.0 75 12-90 437-512 (521)
75 3hyw_A Sulfide-quinone reducta 99.2 8.1E-11 2.8E-15 114.5 10.5 79 10-90 238-329 (430)
76 3h8l_A NADH oxidase; membrane 99.1 7.5E-11 2.6E-15 112.9 7.8 81 6-91 248-333 (409)
77 3h28_A Sulfide-quinone reducta 99.1 1.7E-10 6E-15 111.6 7.5 74 12-90 240-329 (430)
78 3sx6_A Sulfide-quinone reducta 99.0 4.3E-10 1.5E-14 109.3 9.5 75 12-90 253-340 (437)
79 1y56_A Hypothetical protein PH 99.0 3.9E-10 1.3E-14 112.0 6.7 79 7-91 292-374 (493)
80 1cjc_A Protein (adrenodoxin re 98.9 5E-10 1.7E-14 110.9 4.9 73 12-91 317-392 (460)
81 2xve_A Flavin-containing monoo 98.9 2.8E-09 9.4E-14 105.1 9.0 83 6-93 254-340 (464)
82 3d1c_A Flavin-containing putat 98.9 6.6E-10 2.3E-14 103.1 4.0 82 7-92 250-337 (369)
83 1lqt_A FPRA; NADP+ derivative, 98.8 1.5E-09 5E-14 107.5 5.0 71 13-91 311-384 (456)
84 2gv8_A Monooxygenase; FMO, FAD 98.6 5.7E-08 2E-12 94.4 6.9 84 6-92 269-360 (447)
85 2gag_A Heterotetrameric sarcos 98.6 3.3E-08 1.1E-12 106.5 5.6 68 13-91 368-441 (965)
86 1o94_A Tmadh, trimethylamine d 98.4 1.2E-07 4.2E-12 98.9 3.7 74 14-104 632-706 (729)
87 3s5w_A L-ornithine 5-monooxyge 98.2 1.4E-06 4.9E-11 84.1 6.9 74 11-90 360-445 (463)
88 3k30_A Histamine dehydrogenase 98.2 7.6E-07 2.6E-11 92.0 4.2 69 9-92 605-673 (690)
89 2cul_A Glucose-inhibited divis 98.0 5E-06 1.7E-10 74.0 5.8 34 56-91 196-229 (232)
90 2e5v_A L-aspartate oxidase; ar 97.7 7E-06 2.4E-10 81.2 1.5 69 17-89 291-364 (472)
91 1ps9_A 2,4-dienoyl-COA reducta 97.5 5E-05 1.7E-09 78.1 4.6 59 13-89 613-671 (671)
92 1w4x_A Phenylacetone monooxyge 97.1 0.00037 1.3E-08 69.8 5.1 82 5-91 369-463 (542)
93 3gwf_A Cyclohexanone monooxyge 96.4 0.0033 1.1E-07 63.4 6.2 80 5-90 361-453 (540)
94 3k7m_X 6-hydroxy-L-nicotine ox 96.0 0.0018 6E-08 61.5 1.5 60 7-68 238-306 (431)
95 1rp0_A ARA6, thiazole biosynth 95.6 0.0036 1.2E-07 57.2 1.8 78 13-91 176-272 (284)
96 3fpz_A Thiazole biosynthetic e 95.5 0.0019 6.6E-08 59.7 -0.5 44 47-90 271-321 (326)
97 3uox_A Otemo; baeyer-villiger 95.3 0.029 9.8E-07 56.6 7.1 80 5-90 369-462 (545)
98 4b63_A L-ornithine N5 monooxyg 95.1 0.023 7.8E-07 56.4 5.7 84 6-92 387-485 (501)
99 1kf6_A Fumarate reductase flav 94.5 0.028 9.6E-07 57.4 4.7 45 46-90 359-412 (602)
100 4ap3_A Steroid monooxygenase; 94.4 0.056 1.9E-06 54.5 6.5 80 5-90 374-467 (549)
101 3gyx_A Adenylylsulfate reducta 92.7 0.086 2.9E-06 54.8 4.6 38 53-90 446-485 (662)
102 3kkj_A Amine oxidase, flavin-c 92.6 0.088 3E-06 42.9 3.7 36 54-91 290-325 (336)
103 1chu_A Protein (L-aspartate ox 92.5 0.1 3.5E-06 52.4 4.8 46 46-91 354-408 (540)
104 3nlc_A Uncharacterized protein 92.0 0.092 3.2E-06 53.5 3.8 42 48-90 496-539 (549)
105 2bs2_A Quinol-fumarate reducta 91.7 0.14 4.7E-06 53.2 4.7 45 46-90 372-425 (660)
106 1jnr_A Adenylylsulfate reducta 90.7 0.23 7.9E-06 50.9 5.2 37 54-90 427-464 (643)
107 1qo8_A Flavocytochrome C3 fuma 87.4 0.34 1.2E-05 48.5 3.6 46 46-91 502-561 (566)
108 2wdq_A Succinate dehydrogenase 85.4 0.32 1.1E-05 49.4 2.2 45 46-90 357-420 (588)
109 1y0p_A Fumarate reductase flav 83.5 0.54 1.9E-05 47.0 2.8 46 46-91 507-566 (571)
110 1d4d_A Flavocytochrome C fumar 82.4 0.64 2.2E-05 46.8 2.9 46 46-91 507-567 (572)
111 4at0_A 3-ketosteroid-delta4-5a 82.0 0.87 3E-05 44.8 3.6 46 46-91 449-508 (510)
112 2h88_A Succinate dehydrogenase 81.6 0.56 1.9E-05 48.2 2.2 45 46-90 367-429 (621)
113 2gqf_A Hypothetical protein HI 76.9 2.2 7.6E-05 40.9 4.6 41 51-91 353-400 (401)
114 3cp8_A TRNA uridine 5-carboxym 65.1 4.5 0.00015 42.1 4.0 37 52-90 370-408 (641)
115 3ces_A MNMG, tRNA uridine 5-ca 58.2 7.7 0.00026 40.5 4.2 61 52-125 376-442 (651)
116 2i0z_A NAD(FAD)-utilizing dehy 56.6 7.4 0.00025 37.4 3.6 44 47-90 387-440 (447)
117 2zxi_A TRNA uridine 5-carboxym 54.5 8.9 0.00031 39.9 4.0 38 51-90 380-419 (637)
118 3oz2_A Digeranylgeranylglycero 45.5 21 0.00073 32.0 4.6 44 47-90 263-312 (397)
119 3v76_A Flavoprotein; structura 43.4 15 0.00052 35.4 3.4 41 47-88 365-416 (417)
120 3pl8_A Pyranose 2-oxidase; sub 43.1 7 0.00024 39.9 1.1 41 11-51 307-347 (623)
121 3nrn_A Uncharacterized protein 40.2 21 0.00072 33.3 3.8 33 56-89 370-403 (421)
122 2yg5_A Putrescine oxidase; oxi 38.6 30 0.001 32.4 4.6 38 54-91 411-449 (453)
123 4fk1_A Putative thioredoxin re 37.2 16 0.00056 32.5 2.4 25 7-31 96-120 (304)
124 3g5s_A Methylenetetrahydrofola 35.7 17 0.00058 36.4 2.5 37 52-90 320-358 (443)
125 3ka7_A Oxidoreductase; structu 34.7 23 0.00079 32.8 3.1 37 55-91 388-425 (425)
126 3fbs_A Oxidoreductase; structu 31.4 23 0.00079 30.6 2.4 25 7-31 91-115 (297)
127 3klj_A NAD(FAD)-dependent dehy 30.2 27 0.00094 32.9 2.8 26 7-32 95-120 (385)
128 4dgk_A Phytoene dehydrogenase; 28.1 39 0.0013 32.1 3.5 34 56-90 455-488 (501)
129 3sx6_A Sulfide-quinone reducta 27.5 34 0.0011 32.5 2.9 27 6-32 90-116 (437)
130 2e1m_C L-glutamate oxidase; L- 27.0 44 0.0015 28.5 3.3 38 55-92 114-151 (181)
131 3nlc_A Uncharacterized protein 26.2 21 0.00072 36.1 1.3 37 7-43 256-292 (549)
132 1s3e_A Amine oxidase [flavin-c 24.9 67 0.0023 30.9 4.6 38 54-91 414-452 (520)
133 1b37_A Protein (polyamine oxid 24.4 47 0.0016 31.6 3.3 38 54-91 418-456 (472)
134 3hyw_A Sulfide-quinone reducta 23.6 42 0.0014 31.9 2.8 24 6-29 87-110 (430)
135 1q1r_A Putidaredoxin reductase 23.2 44 0.0015 31.8 2.8 26 7-32 93-118 (431)
136 4a5l_A Thioredoxin reductase; 23.1 43 0.0015 29.3 2.6 26 7-32 100-125 (314)
137 4gcm_A TRXR, thioredoxin reduc 23.0 40 0.0014 29.8 2.4 24 8-31 96-119 (312)
138 1nkz_B Light-harvesting protei 22.5 34 0.0011 23.4 1.3 11 116-126 2-12 (41)
139 3h28_A Sulfide-quinone reducta 22.4 51 0.0017 31.1 3.1 26 7-32 88-113 (430)
140 4ap3_A Steroid monooxygenase; 21.5 93 0.0032 30.9 5.0 26 6-31 137-164 (549)
141 3f8d_A Thioredoxin reductase ( 21.5 47 0.0016 28.9 2.5 26 7-32 104-129 (323)
142 3vrd_B FCCB subunit, flavocyto 20.7 55 0.0019 30.2 2.9 26 7-32 87-112 (401)
143 1fl2_A Alkyl hydroperoxide red 20.7 50 0.0017 28.9 2.5 25 7-31 94-118 (310)
No 1
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1e-44 Score=368.71 Aligned_cols=239 Identities=37% Similarity=0.646 Sum_probs=161.5
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCe-eecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHH
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAK-IDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKL 84 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~-I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~v 84 (332)
+..+++.++++|.||+|+||+||++.|+|+++|++++ ++|. |.||+ +|||+|||||+|||+.+.++|+|+|.+||++
T Consensus 298 v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~-~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~ 376 (542)
T 4b1b_A 298 VEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVN-KSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEI 376 (542)
T ss_dssp EEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEE-TTTTEECCCTTSBCSSTTEEECTTSBTTCCCCHHHHHHHHHH
T ss_pred EEEcCCCeEEEEEEEEcccccCCccccCcccceeeec-ccCceEeccccccccCCCeEEeccccCCchhHHHHHHHHHHH
Confidence 4456677889999999999999999999999999998 5554 57888 9999999999999994457999999999999
Q ss_pred HHHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCC
Q psy3825 85 LAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYK 164 (332)
Q Consensus 85 AA~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 164 (332)
+++|++|.....+++..+|+++|++|++|+|||||+||+++++..++.++...+.+.......+. .
T Consensus 377 aa~~i~g~~~~~~d~~~iP~~vft~PeiA~VGlTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~------------~-- 442 (542)
T 4b1b_A 377 LARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQ------------K-- 442 (542)
T ss_dssp HHHHHHSCCCCCCCCSSCCEEECSSSCEEEEECCHHHHHHHHCTTTEEEEEC----------------------------
T ss_pred HHHHHhcCCCcccCCCCCceEEeCCCCeEEEeCCHHHHHHhCCCCcEEEEEeeccchhhhhhhhh------------h--
Confidence 99999998777789999999999999999999999999999876677766544332221110000 0
Q ss_pred CcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccc
Q psy3825 165 PTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIP 244 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
.++. .. ..+ .
T Consensus 443 --------------~~~~-----------------------------------------~~-------~~~------~-- 452 (542)
T 4b1b_A 443 --------------HIRA-----------------------------------------QK-------DEY------D-- 452 (542)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------hhhc-----------------------------------------cc-------ccc------c--
Confidence 0000 00 000 0
Q ss_pred cCCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhhhccCCCCCC
Q psy3825 245 QRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTP 324 (332)
Q Consensus 245 ~~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~~~ 324 (332)
..+.++||+|+|+.++++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|+|.+++.+.+++.+...
T Consensus 453 ~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~i~~HPTlsE~l~~~~~t~~~g~~~~~ 532 (542)
T 4b1b_A 453 LDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAESFMNLFVTISSGLSYAA 532 (542)
T ss_dssp -----CCCEEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC--------------------------
T ss_pred ccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccCCcCCCHHHHHHHHHHHHHcCCCHHH
Confidence 12467899999976467999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCC
Q psy3825 325 QSCCRP 330 (332)
Q Consensus 325 ~~~~~~ 330 (332)
++||..
T Consensus 533 ~~~c~g 538 (542)
T 4b1b_A 533 KGGCGG 538 (542)
T ss_dssp ------
T ss_pred ccCCCC
Confidence 999973
No 2
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=7.4e-42 Score=342.26 Aligned_cols=219 Identities=53% Similarity=0.935 Sum_probs=190.2
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhC
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G 91 (332)
.++++|.||+|+|++||+++|+++++|+++++++|+|.||+ +||++|+|||+|||+.+.+++++.|..||++||+||+|
T Consensus 300 ~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 300 IEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp EEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHS
T ss_pred EEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 46789999999999999999888999999962368999999 99999999999999856789999999999999999998
Q ss_pred CCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCcccccC
Q psy3825 92 NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIP 171 (332)
Q Consensus 92 ~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 171 (332)
......++..+|+++|++|++|+|||||+||+++++..++++.+..|.+.....
T Consensus 380 ~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 433 (519)
T 3qfa_A 380 GSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTI-------------------------- 433 (519)
T ss_dssp CCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCHHHHT--------------------------
T ss_pred CCCccCCCCcCcEEEECCCceEEecCCHHHHHhhCCCCCEEEEEEeccchhhhh--------------------------
Confidence 766667899999999999999999999999999865445776554443321100
Q ss_pred CCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcce
Q psy3825 172 QRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRC 251 (332)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
...+.++|
T Consensus 434 ------------------------------------------------------------------------~~~~~~~g 441 (519)
T 3qfa_A 434 ------------------------------------------------------------------------PSRDNNKC 441 (519)
T ss_dssp ------------------------------------------------------------------------TTCCTTTE
T ss_pred ------------------------------------------------------------------------hccCCCcE
Confidence 01134679
Q ss_pred EEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhhhccCCCCCCCcccC
Q psy3825 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQSCCR 329 (332)
Q Consensus 252 ~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~~~~~~~~ 329 (332)
|+|||+|++++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+..+.+++++|+++....||.
T Consensus 442 ~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~~~~~~~~~~~~~~~~~~~~~~ 519 (519)
T 3qfa_A 442 YAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTLSVTKRSGASILQAGSCG 519 (519)
T ss_dssp EEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCTTCGGGGGGGCCCBTTTTCCCCCCCTTC
T ss_pred EEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHHhhhhcCCChhhccCCC
Confidence 999999932589999999999999999999999999999999999999999999999999999999999999889984
No 3
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=7.6e-42 Score=337.04 Aligned_cols=209 Identities=64% Similarity=1.034 Sum_probs=182.2
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
..++++|.||+|+|++||+++|+|+++|++++ + |+|.||+ +||++|+|||+|||+.+.+++++.|..||++||+||+
T Consensus 273 ~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~-~-G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 350 (483)
T 3dgh_A 273 ESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQ-K-DKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLY 350 (483)
T ss_dssp EEEEEESEEEECSCEEECCGGGTGGGTTCCCB-T-TBBCCCTTCBCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHH
T ss_pred eeEEEcCEEEECcccccCcCcCCchhcCcccc-C-CEEEECcCCccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHc
Confidence 34799999999999999999988899999998 6 9999999 9999999999999985668999999999999999999
Q ss_pred CCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCccccc
Q psy3825 91 GNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFI 170 (332)
Q Consensus 91 G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 170 (332)
|......++..+|+++|++|++|+|||||+||++++|.+.+++.+..|.+..
T Consensus 351 g~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~---------------------------- 402 (483)
T 3dgh_A 351 GGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTE---------------------------- 402 (483)
T ss_dssp SCCCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCCGG----------------------------
T ss_pred CCCCCcCCCCCCCEEEECCCccEEEeCCHHHHHhhCCCCCEEEEEEeecchh----------------------------
Confidence 8766667899999999999999999999999999866445666544333221
Q ss_pred CCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcc
Q psy3825 171 PQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQR 250 (332)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
+.++ ..+.+.
T Consensus 403 ----------------------------------------------~~~~------------------------~~~~~~ 412 (483)
T 3dgh_A 403 ----------------------------------------------FFIP------------------------QKSVRY 412 (483)
T ss_dssp ----------------------------------------------GTTT------------------------TCCCTT
T ss_pred ----------------------------------------------hhhh------------------------ccCCCc
Confidence 0001 113467
Q ss_pred eEEEEEEecCC-CCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhhhccCCC
Q psy3825 251 CYLKVVCERAA-PQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGED 321 (332)
Q Consensus 251 ~~~klv~~~~~-~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~ 321 (332)
||+||++| ++ +++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+..+.++|+||+|
T Consensus 413 ~~~k~i~~-~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~ 483 (483)
T 3dgh_A 413 CYLKAVAE-RHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLAITKRSGLD 483 (483)
T ss_dssp CEEEEEEE-SSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGGCCCBTTTBTC
T ss_pred EEEEEEEe-cCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHhHHhccCC
Confidence 99999999 65 899999999999999999999999999999999999999999999999999999988765
No 4
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.4e-41 Score=336.02 Aligned_cols=214 Identities=55% Similarity=0.973 Sum_probs=184.1
Q ss_pred EEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhCC
Q psy3825 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYGN 92 (332)
Q Consensus 14 ~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G~ 92 (332)
++++|.||+|+|++||+++|+++++|+++++++|+|.||+ |||++|||||+|||+.+.+++++.|..||++||.||+|.
T Consensus 273 ~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 273 TGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp EEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred EEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCC
Confidence 5899999999999999999888999999862378999999 999999999999997567889999999999999999987
Q ss_pred CCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCcccccCC
Q psy3825 93 GTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQ 172 (332)
Q Consensus 93 ~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 172 (332)
.....++..+|+++|++|++|+|||||+||++++|.+.+++.+..|.+....
T Consensus 353 ~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~---------------------------- 404 (488)
T 3dgz_A 353 SSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFT---------------------------- 404 (488)
T ss_dssp CCCCCCCTTCCEEECSSSEEEEEECCHHHHHHHHCGGGEEEEEEECCCHHHH----------------------------
T ss_pred CCccCCCCCCCEEEECCCCeEEEeCCHHHHHhhCCCCcEEEEEccccchhhh----------------------------
Confidence 6666789999999999999999999999999876644566655433322110
Q ss_pred CCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcceE
Q psy3825 173 RNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCY 252 (332)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (332)
++..+.++||
T Consensus 405 ----------------------------------------------------------------------~~~~~~~~g~ 414 (488)
T 3dgz_A 405 ----------------------------------------------------------------------VADRDASQCY 414 (488)
T ss_dssp ----------------------------------------------------------------------HTTCCCTTCE
T ss_pred ----------------------------------------------------------------------hhccCCCcEE
Confidence 0011346899
Q ss_pred EEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhhhccCCCCCCC
Q psy3825 253 LKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQ 325 (332)
Q Consensus 253 ~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~~~~ 325 (332)
+||++|++++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|++..+.++|+||++++.+
T Consensus 415 ~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~~~~ 487 (488)
T 3dgz_A 415 IKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKRSGLEPTVT 487 (488)
T ss_dssp EEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSTHHHHTCCEETTTTCCCC--
T ss_pred EEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHHHHhhcCCCcccC
Confidence 9999993378999999999999999999999999999999999999999999999999999999999887654
No 5
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=2.9e-39 Score=317.79 Aligned_cols=197 Identities=37% Similarity=0.640 Sum_probs=173.2
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhC
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G 91 (332)
+++++|.||+|+|++||++.|+++++|++++ ++|+|.||+ +||++|||||+|||+ +.+++++.|..||++||+||+|
T Consensus 278 ~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~-~~G~i~vd~~~~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 278 MIPDVDCLLWAIGRVPNTKDLSLNKLGIQTD-DKGHIIVDEFQNTNVKGIYAVGDVC-GKALLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp EEEEESEEEECSCEEESCTTSCGGGGTCCBC-TTCCBCCCTTCBCSSTTEEECGGGG-CSSCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEcCEEEEeeccccCCCCCCchhcCCeeC-CCCCEeeCCCcccCCCCEEEEEecC-CCCccHhHHHHHHHHHHHHHcC
Confidence 7899999999999999999888899999998 799999999 999999999999999 7899999999999999999998
Q ss_pred C-CCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCccccc
Q psy3825 92 N-GTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFI 170 (332)
Q Consensus 92 ~-~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 170 (332)
. .....++..+|+++|++|++|+||+||+||+++++..++.+++..|.+.. |+
T Consensus 356 ~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~---------~~----------------- 409 (478)
T 3dk9_A 356 YKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMY---------HA----------------- 409 (478)
T ss_dssp CCTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGG---------GG-----------------
T ss_pred CCCcccCCCCCCCeEEECCCceEEeeCCHHHHHhhCCCccEEEEEeecCcch---------hh-----------------
Confidence 6 34567899999999999999999999999999865445666544333211 00
Q ss_pred CCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcc
Q psy3825 171 PQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQR 250 (332)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
. ..+.+.
T Consensus 410 ----------------------------------------------------------------~---------~~~~~~ 416 (478)
T 3dk9_A 410 ----------------------------------------------------------------V---------TKRKTK 416 (478)
T ss_dssp ----------------------------------------------------------------G---------CSSCCC
T ss_pred ----------------------------------------------------------------h---------hcCCCc
Confidence 0 125678
Q ss_pred eEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHH
Q psy3825 251 CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTR 311 (332)
Q Consensus 251 ~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~ 311 (332)
|++||++| +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+..
T Consensus 417 g~~k~i~~-~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 476 (478)
T 3dk9_A 417 CVMKMVCA-NKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVT 476 (478)
T ss_dssp EEEEEEEE-TTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGS
T ss_pred EEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHh
Confidence 99999999 7899999999999999999999999999999999999999999999998854
No 6
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.1e-39 Score=316.84 Aligned_cols=202 Identities=33% Similarity=0.515 Sum_probs=177.3
Q ss_pred ee-cCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHH
Q psy3825 7 AS-MDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKL 84 (332)
Q Consensus 7 v~-~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~v 84 (332)
+. +++++ +++|.||+|+|++||+++|+++++|++++ ++|+|.||+ +||++|+|||+|||+ +.+++++.|..||++
T Consensus 247 v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~-~~G~i~vd~~~~t~~~~iya~GD~~-~~~~~~~~A~~~g~~ 323 (463)
T 4dna_A 247 ATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTN-ELGAIIVDAFSRTSTPGIYALGDVT-DRVQLTPVAIHEAMC 323 (463)
T ss_dssp EEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBC-TTSCBCCCTTCBCSSTTEEECSGGG-SSCCCHHHHHHHHHH
T ss_pred EEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceEC-CCCCEeECcCCCCCCCCEEEEEecC-CCCCChHHHHHHHHH
Confidence 45 66676 99999999999999999988899999998 789999999 999999999999999 678999999999999
Q ss_pred HHHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCC
Q psy3825 85 LAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYK 164 (332)
Q Consensus 85 AA~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 164 (332)
+|+||+|......++..+|+++|++|++++||+||+||+++ | .++++....|.+. .|+
T Consensus 324 aa~~i~g~~~~~~~~~~~p~~~~~~p~~a~vG~te~~a~~~-~-~~~~~~~~~~~~~---------~~~----------- 381 (463)
T 4dna_A 324 FIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARK-F-QEIEVYRAEFRPM---------KAT----------- 381 (463)
T ss_dssp HHHHHHSSCCCCCCCSCCCEEECSSSCEEEEECCHHHHHHH-S-SEEEEEEEEECCT---------THH-----------
T ss_pred HHHHHcCCCCcccCCCCCCEEEECCCCeEEecCCHHHHHHc-C-CCeEEEEEecccc---------chh-----------
Confidence 99999987656678899999999999999999999999998 4 2466654433211 111
Q ss_pred CcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccc
Q psy3825 165 PTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIP 244 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
+
T Consensus 382 ----------------------------------------------------------------------~--------- 382 (463)
T 4dna_A 382 ----------------------------------------------------------------------L--------- 382 (463)
T ss_dssp ----------------------------------------------------------------------H---------
T ss_pred ----------------------------------------------------------------------h---------
Confidence 0
Q ss_pred cCCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHH
Q psy3825 245 QRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVT 313 (332)
Q Consensus 245 ~~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~ 313 (332)
..+.+.|++||++| +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+..+.
T Consensus 383 ~~~~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 450 (463)
T 4dna_A 383 SGRKEKTIMKLVVN-AADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELVTMY 450 (463)
T ss_dssp HCCCCCEEEEEEEE-TTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGGGGTCCC
T ss_pred cCCCceEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHh
Confidence 12567899999999 789999999999999999999999999999999999999999999999998765
No 7
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.7e-38 Score=313.71 Aligned_cols=199 Identities=28% Similarity=0.429 Sum_probs=175.2
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
.+++++|.||+|+|++||++.|+++++|++++ ++|+|.||+ +||++|+|||+|||+ +.+++++.|..||++||++|+
T Consensus 284 ~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~-~~G~i~vd~~~~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~aa~~i~ 361 (491)
T 3urh_A 284 ATTLDAEVVLIATGRKPSTDGLGLAKAGVVLD-SRGRVEIDRHFQTSIAGVYAIGDVV-RGPMLAHKAEDEGVAVAEIIA 361 (491)
T ss_dssp CEEEEESEEEECCCCEECCTTSCHHHHTCCBC-TTSCBCCCTTCBCSSTTEEECGGGS-SSCCCHHHHHHHHHHHHHHHT
T ss_pred eEEEEcCEEEEeeCCccCCCccCchhcCceEC-CCCCEeECCCCCCCCCCEEEEEecC-CCccchhHHHHHHHHHHHHHc
Confidence 37899999999999999999988899999998 789999999 999999999999999 788999999999999999999
Q ss_pred CCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCccccc
Q psy3825 91 GNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFI 170 (332)
Q Consensus 91 G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 170 (332)
|.. ..+++..+|+++|++|++|+||+||+||+++ |. ++++....|... .|+
T Consensus 362 g~~-~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~-g~-~~~~~~~~~~~~---------~~~----------------- 412 (491)
T 3urh_A 362 GQA-GHVNYDVIPGVVYTQPEVASVGKTEEELKAA-GV-AYKIGKFPFTAN---------GRA----------------- 412 (491)
T ss_dssp TSC-CCCCTTCCCEEECSSSCEEEEECCHHHHHHT-TC-CEEEEEEEGGGC---------HHH-----------------
T ss_pred CCC-cccCCCCCCEEEEccCCeEEEeCCHHHHHhC-CC-CEEEEEEecCcc---------hhh-----------------
Confidence 864 4578889999999999999999999999998 53 466654433211 111
Q ss_pred CCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcc
Q psy3825 171 PQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQR 250 (332)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
. ..+.++
T Consensus 413 ----------------------------------------------------------------~---------~~~~~~ 419 (491)
T 3urh_A 413 ----------------------------------------------------------------R---------AMLQTD 419 (491)
T ss_dssp ----------------------------------------------------------------H---------HTTCCC
T ss_pred ----------------------------------------------------------------h---------cCCCCc
Confidence 0 014577
Q ss_pred eEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 251 CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 251 ~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
|++||++| +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+.+++..
T Consensus 420 g~~k~i~~-~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 483 (491)
T 3urh_A 420 GFVKILAD-KETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALS 483 (491)
T ss_dssp CEEEEEEE-TTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHHH
T ss_pred EEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHHH
Confidence 99999999 78999999999999999999999999999999999999999999999999999864
No 8
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=7.2e-39 Score=324.00 Aligned_cols=221 Identities=46% Similarity=0.832 Sum_probs=183.4
Q ss_pred CCeeEE--EcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHH
Q psy3825 10 DKVFED--TYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLA 86 (332)
Q Consensus 10 ~dg~~I--~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA 86 (332)
.+++++ ++|.||+|+|++||+++|+++++|++++ ++|+|.||+ |||++|+|||+|||+.+.+.+++.|..||+.||
T Consensus 375 ~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~-~~G~i~vd~~~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa 453 (598)
T 2x8g_A 375 TDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLD-KNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLA 453 (598)
T ss_dssp TTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBC-TTSCBCCCTTSBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHH
T ss_pred CCCcEEeccCCEEEEEeCCccccCccCchhcCceEC-CCCcEEeCCCCcCCCCCEEEEeeecCCCCccHHHHHHhHHHHH
Confidence 344444 5999999999999999887788999998 789999999 999999999999996466889999999999999
Q ss_pred HHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCc
Q psy3825 87 ARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPT 166 (332)
Q Consensus 87 ~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 166 (332)
.||+|......++..+|+++|++|++++||+||++|++.+|.+++++.+..|.+....
T Consensus 454 ~~i~~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~---------------------- 511 (598)
T 2x8g_A 454 RRLFAGATELTDYSNVATTVFTPLEYGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWT---------------------- 511 (598)
T ss_dssp HHHHHCCCCCCCCTTCCEEECSSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCTHHH----------------------
T ss_pred HHHhcCCCcccCCCCCcEEEECCCceEEEeCCHHHHHhhCCCCcEEEEEEeccchhHH----------------------
Confidence 9999765556788899999999999999999999999886644577765444322100
Q ss_pred ccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccC
Q psy3825 167 EFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQR 246 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
+...
T Consensus 512 ----------------------------------------------------------------------------~~~~ 515 (598)
T 2x8g_A 512 ----------------------------------------------------------------------------VAHR 515 (598)
T ss_dssp ----------------------------------------------------------------------------HTTC
T ss_pred ----------------------------------------------------------------------------hhcC
Confidence 0011
Q ss_pred CCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhhhccCCCCCCCc
Q psy3825 247 NPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQS 326 (332)
Q Consensus 247 ~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~~~~~ 326 (332)
+...|++|++++++++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+..++.++.++.++...+
T Consensus 516 ~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~~~~~ 595 (598)
T 2x8g_A 516 EDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTTLHVTKKSGVSPIVSG 595 (598)
T ss_dssp CSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCCCBSTTCCCCCC--
T ss_pred CCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhccccCCCHHHHHHHHHHhhhcccchhhcc
Confidence 23679999999933689999999999999999999999999999999999999999999999999988766678899999
Q ss_pred ccC
Q psy3825 327 CCR 329 (332)
Q Consensus 327 ~~~ 329 (332)
||.
T Consensus 596 ~~~ 598 (598)
T 2x8g_A 596 CCG 598 (598)
T ss_dssp ---
T ss_pred cCC
Confidence 994
No 9
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=2.1e-38 Score=310.93 Aligned_cols=198 Identities=29% Similarity=0.502 Sum_probs=173.6
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhC
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G 91 (332)
+++++|.||+|+|++||++.|.++++|++++ ++|+|.||+ +||++|+|||+|||+ +.+++++.|..||++||+||+|
T Consensus 265 ~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~-~~G~i~vd~~~~t~~~~Iya~GD~~-~~~~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 265 KSQAFDKLIVAVGRRPVTTDLLAADSGVTLD-ERGFIYVDDYCATSVPGVYAIGDVV-RGAMLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp EEEEESEEEECSCEEECCTTCCSSCCSCCBC-TTSCBCCCTTSBCSSTTEEECGGGS-SSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEECCEEEEeeCCcccCCCCCccccCcccc-CCCCEeeCCCcccCCCCEEEEEccC-CCcccHHHHHHHHHHHHHHhcC
Confidence 6799999999999999999877889999998 789999999 999999999999999 7889999999999999999998
Q ss_pred CCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCcccccC
Q psy3825 92 NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIP 171 (332)
Q Consensus 92 ~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 171 (332)
.. ..+++..+|+++|++|++|+|||||+||++. |. ++.+....|... .|.
T Consensus 343 ~~-~~~~~~~~p~~~~~~~~~a~vGlte~~a~~~-g~-~~~~~~~~~~~~---------~~~------------------ 392 (476)
T 3lad_A 343 HK-AQMNYDLIPAVIYTHPEIAGVGKTEQALKAE-GV-AINVGVFPFAAS---------GRA------------------ 392 (476)
T ss_dssp CC-CCCCTTCCCEEECSSSEEEEEECCHHHHHHT-TC-CEEEEEEEGGGC---------HHH------------------
T ss_pred CC-cccCCCCCCEEEECcCCEEEeeCCHHHHHhc-CC-CEEEEEEecccc---------chh------------------
Confidence 64 4578889999999999999999999999997 53 355544322211 111
Q ss_pred CCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcce
Q psy3825 172 QRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRC 251 (332)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
. ..+.+.|
T Consensus 393 ---------------------------------------------------------------~---------~~~~~~~ 400 (476)
T 3lad_A 393 ---------------------------------------------------------------M---------AANDTAG 400 (476)
T ss_dssp ---------------------------------------------------------------H---------HHTCCCC
T ss_pred ---------------------------------------------------------------e---------ecCCCcE
Confidence 0 0145679
Q ss_pred EEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 252 ~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
++|+++| +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+.+++..
T Consensus 401 ~~k~~~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 463 (476)
T 3lad_A 401 FVKVIAD-AKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEALHEAALA 463 (476)
T ss_dssp EEEEEEE-TTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSCCCSSCSHHHHHHHHHH
T ss_pred EEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHHH
Confidence 9999999 78999999999999999999999999999999999999999999999999999874
No 10
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.1e-38 Score=315.17 Aligned_cols=203 Identities=33% Similarity=0.511 Sum_probs=176.6
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHH
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLL 85 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vA 85 (332)
+.+.+++++++|.||+|+|++||+++|+++++|++++ ++|+|.||+ +||++|+|||+|||+ +.+++++.|..||+++
T Consensus 267 v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~-~~G~i~vd~~~~t~~~~Iya~GD~~-~~~~~~~~A~~~g~~a 344 (484)
T 3o0h_A 267 VVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVN-EFGAVVVDEKMTTNVSHIWAVGDVT-GHIQLTPVAIHDAMCF 344 (484)
T ss_dssp EEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBC-TTSCBCCCTTSBCSSTTEEECGGGG-TSCCCHHHHHHHHHHH
T ss_pred EEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceEC-CCCCEeECCCCCCCCCCEEEEEecC-CCCcCHHHHHHHHHHH
Confidence 5566778899999999999999999988889999998 789999999 999999999999999 6789999999999999
Q ss_pred HHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCC
Q psy3825 86 AARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKP 165 (332)
Q Consensus 86 A~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 165 (332)
|.||+|.....+++..+|+++|++|++|+|||||++|+++ | .++++....|.+.. |+
T Consensus 345 a~~i~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~-g-~~~~~~~~~~~~~~---------~~------------ 401 (484)
T 3o0h_A 345 VKNAFENTSTTPDYDLITTAVFSQPEIGTVGLSEEDALHR-Y-KRVEIYRTVFRPMR---------NV------------ 401 (484)
T ss_dssp HHHHHC---CCCCCTTCCEEECCSSCEEEEECCHHHHHHH-C-SEEEEEEEEECCHH---------HH------------
T ss_pred HHHHcCCCCCcCCCCCCcEEEECCCCEEEeeCCHHHHHHc-C-CCEEEEEecCCcch---------hh------------
Confidence 9999987656678999999999999999999999999998 4 24666554332211 11
Q ss_pred cccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCccccccc
Q psy3825 166 TEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQ 245 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
+ .
T Consensus 402 ---------------------------------------------------------------------~---------~ 403 (484)
T 3o0h_A 402 ---------------------------------------------------------------------L---------S 403 (484)
T ss_dssp ---------------------------------------------------------------------H---------H
T ss_pred ---------------------------------------------------------------------c---------c
Confidence 0 1
Q ss_pred CCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHH
Q psy3825 246 RNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVT 313 (332)
Q Consensus 246 ~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~ 313 (332)
.+.++|++||++| +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+..++
T Consensus 404 ~~~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 470 (484)
T 3o0h_A 404 GSPEKMFMKLVVD-GESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVTMY 470 (484)
T ss_dssp TCCCCEEEEEEEE-TTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGCCC
T ss_pred CCCCcEEEEEEEE-CCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHHh
Confidence 2467899999999 789999999999999999999999999999999999999999999999998765
No 11
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=3.3e-38 Score=313.55 Aligned_cols=201 Identities=21% Similarity=0.272 Sum_probs=175.7
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecC-C-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSD-N-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VD-e-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
+++++|.||+|+|++||+++|+++++|++++ ++|+|.|| + +||++|+|||+|||+ +.+++++.|..||++||.||+
T Consensus 259 ~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~-~~G~i~vd~~~~~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~aa~~i~ 336 (492)
T 3ic9_A 259 TTESFQYVLAATGRKANVDKLGLENTSIELD-KKNSPLFDELTLQTSVDHIFVAGDAN-NTLTLLHEAADDGKVAGTNAG 336 (492)
T ss_dssp EEEEESEEEECSCCEESCSSSCGGGSCCCBC-TTCCBCCCTTTCBCSSTTEEECGGGG-TSSCSHHHHHHHHHHHHHHHH
T ss_pred EEEECCEEEEeeCCccCCCCCChhhcCCEEC-CCCCEeECcccccCCCCCEEEEEecC-CCCccHHHHHHHHHHHHHHHc
Confidence 7899999999999999999988899999998 89999999 8 999999999999999 778899999999999999999
Q ss_pred C-CCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCC---CEEEEEeecCCccccccCCCccchhhhhhccccCCCc
Q psy3825 91 G-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGAD---NLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPT 166 (332)
Q Consensus 91 G-~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 166 (332)
+ ......++..+|+++|++|++|+||+||+||++.+|.| ++++....|... .|.
T Consensus 337 ~~~~~~~~~~~~~p~~~~~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~---------~~a------------- 394 (492)
T 3ic9_A 337 AYPVIAQGQRRAPLSVVFTEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQ---------GRS------------- 394 (492)
T ss_dssp HTTSCCEECCCCCEEEECSSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGC---------HHH-------------
T ss_pred CCCCCcccCCCCCcEEEECCCCeEEecCCHHHHHhccCccCCccEEEEEEEeccc---------hhh-------------
Confidence 7 34455778889999999999999999999999986432 366655443221 111
Q ss_pred ccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccC
Q psy3825 167 EFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQR 246 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
. ..
T Consensus 395 --------------------------------------------------------------------~---------~~ 397 (492)
T 3ic9_A 395 --------------------------------------------------------------------R---------VM 397 (492)
T ss_dssp --------------------------------------------------------------------H---------HT
T ss_pred --------------------------------------------------------------------h---------hc
Confidence 0 12
Q ss_pred CCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 247 NPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 247 ~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
+.+.|++||++| +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+.+++..
T Consensus 398 ~~~~g~~kli~~-~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~~ 465 (492)
T 3ic9_A 398 GKNKGLLNVYAD-RTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMPFYHPVIEEGLRTALRD 465 (492)
T ss_dssp TCCCCEEEEEEE-TTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSCCCTTCTHHHHHHHHHH
T ss_pred CCCcEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCChHHHHHHHHHH
Confidence 457899999999 78999999999999999999999999999999999999999999999999998754
No 12
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=9.1e-39 Score=317.41 Aligned_cols=217 Identities=29% Similarity=0.495 Sum_probs=185.2
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHH
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLL 85 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vA 85 (332)
+.+++++++++|.||+|+|++||++.|+++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++|
T Consensus 267 v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~-~~G~I~Vd~~~~t~~~~IyA~GD~~-~~~~l~~~A~~~g~~a 344 (490)
T 1fec_A 267 VVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVA-KNGAIKVDAYSKTNVDNIYAIGDVT-DRVMLTPVAINEGAAF 344 (490)
T ss_dssp EEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBC-TTSCBCCCTTCBCSSTTEEECGGGG-CSCCCHHHHHHHHHHH
T ss_pred EEECCCcEEEcCEEEEccCCCcCccccCchhcCccCC-CCCCEEECCCCccCCCCEEEEeccC-CCccCHHHHHHHHHHH
Confidence 4556677899999999999999999777788999998 789999999 999999999999999 6788999999999999
Q ss_pred HHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCC
Q psy3825 86 AARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKP 165 (332)
Q Consensus 86 A~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 165 (332)
|.||+|......++..+|+++|++|++++||+||++|++. + +++++.+..|.+.. |.
T Consensus 345 a~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~-~-~~~~~~~~~~~~~~---------~~------------ 401 (490)
T 1fec_A 345 VDTVFANKPRATDHTKVACAVFSIPPMGVCGYVEEDAAKK-Y-DQVAVYESSFTPLM---------HN------------ 401 (490)
T ss_dssp HHHHHSSCCCCCCCSSCCEEECCSSCEEEEECCHHHHHHH-C-SEEEEEEEEECCHH---------HH------------
T ss_pred HHHhcCCCCCcCCCCCccEEEECCCCeEEEeCCHHHHHhc-C-CCEEEEEeecChhh---------hh------------
Confidence 9999986555678899999999999999999999999987 4 24666544332211 00
Q ss_pred cccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCccccccc
Q psy3825 166 TEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQ 245 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
+ .
T Consensus 402 -----------------------------------------------------------------------------~-~ 403 (490)
T 1fec_A 402 -----------------------------------------------------------------------------I-S 403 (490)
T ss_dssp -----------------------------------------------------------------------------H-H
T ss_pred -----------------------------------------------------------------------------h-h
Confidence 0 1
Q ss_pred CCCcceEE-EEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHH-hhhccCCCCC
Q psy3825 246 RNPQRCYL-KVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVT-ITKRSGEDPT 323 (332)
Q Consensus 246 ~~~~~~~~-klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~-~~~~~~~~~~ 323 (332)
.+.+.+|+ |++++ +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+.+++ .++++++++.
T Consensus 404 ~~~~~~~~~kli~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~~~ 482 (490)
T 1fec_A 404 GSTYKKFMVRIVTN-HADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMRTPAYFYEKGKR 482 (490)
T ss_dssp SCTTCCEEEEEEEE-TTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCCSCSEEEETTEE
T ss_pred cCCCeEEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHHHHHHhhcCcccc
Confidence 23577999 99999 789999999999999999999999999999999999999999999999999987 6677777765
Q ss_pred CCcc
Q psy3825 324 PQSC 327 (332)
Q Consensus 324 ~~~~ 327 (332)
...|
T Consensus 483 ~~~~ 486 (490)
T 1fec_A 483 VEKI 486 (490)
T ss_dssp ECC-
T ss_pred cccc
Confidence 5555
No 13
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.4e-38 Score=316.87 Aligned_cols=220 Identities=28% Similarity=0.461 Sum_probs=185.7
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHH
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLL 85 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vA 85 (332)
+.+++|+++++|.||+|+|++||++.|+++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++|
T Consensus 271 v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~-~~G~i~Vd~~~~t~~~~IyA~GD~~-~~~~l~~~A~~~g~~a 348 (495)
T 2wpf_A 271 VTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLT-PKGGVQVDEFSRTNVPNIYAIGDIT-DRLMLTPVAINEGAAL 348 (495)
T ss_dssp EEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBC-TTSSBCCCTTCBCSSTTEEECGGGG-CSCCCHHHHHHHHHHH
T ss_pred EEECCCcEEEcCEEEECCCCcccccccchhhcCccCC-CCCCEEECCCCccCCCCEEEEeccC-CCccCHHHHHHHHHHH
Confidence 4556777899999999999999999877889999998 789999999 999999999999999 6788999999999999
Q ss_pred HHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCC
Q psy3825 86 AARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKP 165 (332)
Q Consensus 86 A~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 165 (332)
|.||+|......++..+|+++|++|++++||+||++|++. + +++++.+..|.+.. |+
T Consensus 349 a~~i~g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~-~-~~~~v~~~~~~~~~---------~~------------ 405 (495)
T 2wpf_A 349 VDTVFGNKPRKTDHTRVASAVFSIPPIGTCGLIEEVAAKE-F-EKVAVYMSSFTPLM---------HN------------ 405 (495)
T ss_dssp HHHHHSSCCCCCCCSSCEEEECCSSCEEEEECCHHHHHHH-S-SEEEEEEEEECCTH---------HH------------
T ss_pred HHHhcCCCCCcCCCCCCCEEEECCCCeEEEeCCHHHHHhc-C-CCEEEEEEecCchh---------hh------------
Confidence 9999986555678999999999999999999999999987 4 24666544332211 00
Q ss_pred cccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCccccccc
Q psy3825 166 TEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQ 245 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
+ .
T Consensus 406 -----------------------------------------------------------------------------~-~ 407 (495)
T 2wpf_A 406 -----------------------------------------------------------------------------I-S 407 (495)
T ss_dssp -----------------------------------------------------------------------------H-H
T ss_pred -----------------------------------------------------------------------------h-h
Confidence 0 1
Q ss_pred CCCcceE-EEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHH-hhhccCCCCC
Q psy3825 246 RNPQRCY-LKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVT-ITKRSGEDPT 323 (332)
Q Consensus 246 ~~~~~~~-~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~-~~~~~~~~~~ 323 (332)
.+.+.|| +||++| +++++|||+|++|++|+|+|+.+++||+.|+|++||.+++++|||++|.+.+++ .+++++.++.
T Consensus 408 ~~~~~~~~~klv~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~~~ 486 (495)
T 2wpf_A 408 GSKYKKFVAKIVTN-HSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGEK 486 (495)
T ss_dssp SCTTCCEEEEEEEE-TTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCCSCSEEEETTEE
T ss_pred cCCCcEEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHHHhhhcCCchh
Confidence 2357799 999999 789999999999999999999999999999999999999999999999999887 5666666655
Q ss_pred CCcccCC
Q psy3825 324 PQSCCRP 330 (332)
Q Consensus 324 ~~~~~~~ 330 (332)
...|-..
T Consensus 487 ~~~~~~~ 493 (495)
T 2wpf_A 487 MEKLPDS 493 (495)
T ss_dssp ESSCC--
T ss_pred hcCCCCC
Confidence 5555433
No 14
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=7.3e-38 Score=307.83 Aligned_cols=199 Identities=23% Similarity=0.304 Sum_probs=174.1
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhC
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G 91 (332)
+++++|.||+|+|++||++ |+++++|++++ ++| |.||+ |||++|+|||+|||+ +.+++++.|..||++||.||+|
T Consensus 257 ~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~-~~G-i~vd~~~~t~~~~Iya~GD~~-~~~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 257 KSIFTNSVVLAAGRRPVIP-EGAREIGLSIS-KTG-IVVDETMKTNIPNVFATGDAN-GLAPYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp EEEEESCEEECCCEEECCC-TTTGGGTCCBC-SSS-BCCCTTCBCSSTTEEECGGGT-CSCCSHHHHHHHHHHHHHHHHT
T ss_pred EEEEcCEEEECcCCCcccc-cchhhcCceeC-CCC-EeECCCccCCCCCEEEEEecC-CCCccHhHHHHHHHHHHHHHhC
Confidence 3899999999999999999 77889999998 789 99999 999999999999999 6789999999999999999998
Q ss_pred C--CCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCcccc
Q psy3825 92 N--GTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFF 169 (332)
Q Consensus 92 ~--~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 169 (332)
. .....++..+|+++|++|++++||+||++|++. |. ++++....+... .|.
T Consensus 333 ~~~~~~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~-g~-~~~~~~~~~~~~---------~~~---------------- 385 (466)
T 3l8k_A 333 NGMPVDYVDVKSIPVTIYTIPSLSYVGILPSKARKM-GI-EIVEAEYNMEED---------VSA---------------- 385 (466)
T ss_dssp TTSCCCCCCSTTSCEEECSSSCEEEEECCHHHHHHH-TC-CEEEEEEEGGGS---------HHH----------------
T ss_pred CCCCccccCCCCCcEEEECCCCeEEecCCHHHHHhC-CC-CEEEEEEEcccC---------hhh----------------
Confidence 6 555678899999999999999999999999998 53 466654433211 111
Q ss_pred cCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCc
Q psy3825 170 IPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQ 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
+ ..+.+
T Consensus 386 -----------------------------------------------------------------~---------~~~~~ 391 (466)
T 3l8k_A 386 -----------------------------------------------------------------Q---------IYGQK 391 (466)
T ss_dssp -----------------------------------------------------------------H---------HHTCC
T ss_pred -----------------------------------------------------------------e---------ecCCC
Confidence 0 01457
Q ss_pred ceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhhhc
Q psy3825 250 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKR 317 (332)
Q Consensus 250 ~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~ 317 (332)
+||+|+++| +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+.+++...-
T Consensus 392 ~g~~k~i~~-~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~ 458 (466)
T 3l8k_A 392 EGVLKLIFE-RGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEIISYTARKVI 458 (466)
T ss_dssp CCEEEEEEE-TTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTHHHHHHHHHHH
T ss_pred eEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHHHHHHHHHHHH
Confidence 899999999 7899999999999999999999999999999999999999999999999999987644
No 15
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=4.5e-38 Score=308.48 Aligned_cols=203 Identities=38% Similarity=0.637 Sum_probs=174.9
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHH
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLL 85 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vA 85 (332)
+.+++++++++|.||+|+|++||++.|+++++|++++ ++|+|.||+ +||++|+|||+|||+ +.+++++.|..||+++
T Consensus 244 v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~-~~g~i~vd~~~~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~a 321 (450)
T 1ges_A 244 LELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTN-EKGYIVVDKYQNTNIEGIYAVGDNT-GAVELTPVAVAAGRRL 321 (450)
T ss_dssp EEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBC-TTSCBCCCTTSBCSSTTEEECSGGG-TSCCCHHHHHHHHHHH
T ss_pred EEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceEC-CCCCEeECCCCccCCCCEEEEeccC-CCCccHHHHHHHHHHH
Confidence 4556777899999999999999999776788899998 789999999 999999999999998 6788999999999999
Q ss_pred HHHHhCCCCcc-cccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCC
Q psy3825 86 AARLYGNGTTQ-MDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYK 164 (332)
Q Consensus 86 A~nI~G~~~~~-~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 164 (332)
|.||+|..... .++..+|+++|++|++++||+||++|++.+|.+++++....|.+.. |+
T Consensus 322 a~~i~~~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~g~~~~~~~~~~~~~~~---------~~----------- 381 (450)
T 1ges_A 322 SERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMY---------TA----------- 381 (450)
T ss_dssp HHHHHTTCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEEECHH---------HH-----------
T ss_pred HHHHcCCCCcccCCCCCCCeEEECCCceEEEeCCHHHHHhcCCCCcEEEEEEECchhh---------HH-----------
Confidence 99999865444 6888999999999999999999999998865335776654332211 10
Q ss_pred CcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccc
Q psy3825 165 PTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIP 244 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
.
T Consensus 382 ----------------------------------------------------------------------~--------- 382 (450)
T 1ges_A 382 ----------------------------------------------------------------------V--------- 382 (450)
T ss_dssp ----------------------------------------------------------------------T---------
T ss_pred ----------------------------------------------------------------------H---------
Confidence 0
Q ss_pred cCCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHH
Q psy3825 245 QRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTR 311 (332)
Q Consensus 245 ~~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~ 311 (332)
..+.+.+|+|+++| +++++|||+|++|++|+|+|+.+++||+.|+|++||.+++++|||++|.+..
T Consensus 383 ~~~~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 448 (450)
T 1ges_A 383 TTHRQPCRMKLVCV-GSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVT 448 (450)
T ss_dssp SSSCCEEEEEEEEE-TTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGS
T ss_pred hcCCCcEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHHHHHh
Confidence 12457899999999 7899999999999999999999999999999999999999999999998754
No 16
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-38 Score=308.72 Aligned_cols=205 Identities=34% Similarity=0.637 Sum_probs=175.4
Q ss_pred eecCCe-eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHH
Q psy3825 7 ASMDKV-FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKL 84 (332)
Q Consensus 7 v~~~dg-~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~v 84 (332)
+.+++| +++++|.||+|+|++||+ .|+++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++
T Consensus 263 v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~-~~G~i~vd~~~~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~ 339 (479)
T 2hqm_A 263 IHMNDSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLN-SHDQIIADEYQNTNVPNIYSLGDVV-GKVELTPVAIAAGRK 339 (479)
T ss_dssp EEETTSCEEEEESEEEECSCEEECC-CSSGGGGTCCBC-TTSCBCCCTTCBCSSTTEEECGGGT-TSSCCHHHHHHHHHH
T ss_pred EEECCCcEEEEcCEEEECCCCCCcc-ccChhhcCceEC-CCCCEeECCCCccCCCCEEEEEecC-CCcccHHHHHHHHHH
Confidence 455667 789999999999999999 566788999998 789999999 999999999999998 678899999999999
Q ss_pred HHHHHhCCC---CcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccc
Q psy3825 85 LAARLYGNG---TTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHA 161 (332)
Q Consensus 85 AA~nI~G~~---~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 161 (332)
||.||+|.. ....++..+|+++|++|++++||+||++|++.+|.+++++....|.+.. |+
T Consensus 340 aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~vGl~e~~a~~~~~~~~~~~~~~~~~~~~---------~~-------- 402 (479)
T 2hqm_A 340 LSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSIGISEKEAIEKYGKENIKVYNSKFTAMY---------YA-------- 402 (479)
T ss_dssp HHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGG---------GG--------
T ss_pred HHHHhcCCCccCcccCCCCCCCeEEECCCCeEEEeCCHHHHHhcCCCCcEEEEEEeccHHH---------HH--------
Confidence 999999864 3456788899999999999999999999998866445776654332211 00
Q ss_pred cCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCccc
Q psy3825 162 YYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEF 241 (332)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
.
T Consensus 403 -------------------------------------------------------------------------~------ 403 (479)
T 2hqm_A 403 -------------------------------------------------------------------------M------ 403 (479)
T ss_dssp -------------------------------------------------------------------------G------
T ss_pred -------------------------------------------------------------------------h------
Confidence 0
Q ss_pred ccccCCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHh
Q psy3825 242 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTI 314 (332)
Q Consensus 242 ~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~ 314 (332)
..+.+.|++|+++| +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+.+++.
T Consensus 404 ---~~~~~~~~~kli~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 472 (479)
T 2hqm_A 404 ---LSEKSPTRYKIVCA-GPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELVTMRG 472 (479)
T ss_dssp ---CSSCCCEEEEEEEE-TTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCC-
T ss_pred ---hcCCCcEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCChHHHHHHHHH
Confidence 12456799999999 7899999999999999999999999999999999999999999999999976654
No 17
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.3e-37 Score=308.50 Aligned_cols=216 Identities=21% Similarity=0.302 Sum_probs=177.9
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHH
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLL 85 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vA 85 (332)
+.+++++++++|.||+|+|++||+++|+++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++|
T Consensus 258 v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~-~~G~i~Vd~~~~t~~~~IyA~GD~~-~~~~l~~~A~~~g~~a 335 (499)
T 1xdi_A 258 VTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLG-RGNYLTVDRVSRTLATGIYAAGDCT-GLLPLASVAAMQGRIA 335 (499)
T ss_dssp EEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCB-TTTBCCCCSSSBCSSTTEEECSGGG-TSCSCHHHHHHHHHHH
T ss_pred EEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceEC-CCCCEEECCCcccCCCCEEEEeccC-CCcccHHHHHHHHHHH
Confidence 3446677899999999999999999888889999998 789999999 999999999999999 6788999999999999
Q ss_pred HHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCC
Q psy3825 86 AARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKP 165 (332)
Q Consensus 86 A~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 165 (332)
|.||+|.....+++..+|+++|++|++++||+||++|++. |. ++++....|. +..|.
T Consensus 336 a~~i~g~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~-g~-~~~~~~~~~~---------~~~~~------------ 392 (499)
T 1xdi_A 336 MYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAG-SV-AARTIMLPLR---------TNARA------------ 392 (499)
T ss_dssp HHHHTTCCCCCCCGGGCEEEECSSSEEEEEESCHHHHHHT-SS-CEEEEEEEST---------TSHHH------------
T ss_pred HHHhcCCCCccCCCCCCcEEEEecCCceEeCCCHHHHHhC-CC-CEEEEEEecC---------cccce------------
Confidence 9999986345678889999999999999999999999987 43 3665543322 11111
Q ss_pred cccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCccccccc
Q psy3825 166 TEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQ 245 (332)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (332)
. .
T Consensus 393 ---------------------------------------------------------------------~---------~ 394 (499)
T 1xdi_A 393 ---------------------------------------------------------------------K---------M 394 (499)
T ss_dssp ---------------------------------------------------------------------H---------H
T ss_pred ---------------------------------------------------------------------e---------e
Confidence 0 1
Q ss_pred CCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhhhccCCCCCCC
Q psy3825 246 RNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTPQ 325 (332)
Q Consensus 246 ~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~~~~ 325 (332)
.+...||+|++++ +++++|||+|++|++|.|+|+.+++||++|+|++||.+++++|||++|.+..++.... . ...+
T Consensus 395 ~~~~~g~~k~~~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~~~--~-~~~~ 470 (499)
T 1xdi_A 395 SEMRHGFVKIFCR-RSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSITEAARRLM--A-HDDL 470 (499)
T ss_dssp TTCSSCEEEEEEE-TTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSBCCSSSTHHHHHHHHHHHC--C-----
T ss_pred cCCCceEEEEEEE-CCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHHHHh--c-cccc
Confidence 2456899999999 7889999999999999999999999999999999999999999999999999887421 2 2567
Q ss_pred cccC
Q psy3825 326 SCCR 329 (332)
Q Consensus 326 ~~~~ 329 (332)
+||.
T Consensus 471 ~~~~ 474 (499)
T 1xdi_A 471 DCTA 474 (499)
T ss_dssp ----
T ss_pred hhhH
Confidence 8986
No 18
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=4.9e-38 Score=309.72 Aligned_cols=215 Identities=36% Similarity=0.624 Sum_probs=183.2
Q ss_pred eecCCee-EEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHH
Q psy3825 7 ASMDKVF-EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKL 84 (332)
Q Consensus 7 v~~~dg~-~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~v 84 (332)
+.+++|+ ++++|.||+|+|++||++.|.++++|++++ ++|+|.||+ +||++|+|||+|||+ +.+++++.|..||+.
T Consensus 242 v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~-~~G~i~vd~~~~t~~~~Iya~GD~~-~~~~~~~~A~~~g~~ 319 (463)
T 2r9z_A 242 LVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQ-SNGMVPTDAYQNTNVPGVYALGDIT-GRDQLTPVAIAAGRR 319 (463)
T ss_dssp EEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCC-TTSCCCCCTTSBCSSTTEEECGGGG-TSCCCHHHHHHHHHH
T ss_pred EEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccC-CCCCEeECCCCccCCCCEEEEeecC-CCcccHHHHHHHHHH
Confidence 4556777 899999999999999998777788899998 789999999 999999999999998 678899999999999
Q ss_pred HHHHHhCCCCcc-cccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccC
Q psy3825 85 LAARLYGNGTTQ-MDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYY 163 (332)
Q Consensus 85 AA~nI~G~~~~~-~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 163 (332)
+|.||+|..... .++..+|+++|++|++++||+||++|++++| .++++....+.+.. |+
T Consensus 320 aa~~i~g~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g-~~~~~~~~~~~~~~---------~~---------- 379 (463)
T 2r9z_A 320 LAERLFDGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLG-DVLTVYETSFTPMR---------YA---------- 379 (463)
T ss_dssp HHHHHHSCCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHC-SCEEEEEEEECCGG---------GT----------
T ss_pred HHHHHcCCCCcccCCCCCCCEEEeCCCCeEEEcCCHHHHHhcCC-CCEEEEEEEcccch---------hh----------
Confidence 999999865444 7888999999999999999999999998866 45776554332211 00
Q ss_pred CCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCccccc
Q psy3825 164 KPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFI 243 (332)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (332)
.
T Consensus 380 -----------------------------------------------------------------------~-------- 380 (463)
T 2r9z_A 380 -----------------------------------------------------------------------L-------- 380 (463)
T ss_dssp -----------------------------------------------------------------------T--------
T ss_pred -----------------------------------------------------------------------h--------
Confidence 0
Q ss_pred ccCCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhhhccCCCCC
Q psy3825 244 PQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPT 323 (332)
Q Consensus 244 ~~~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~~ 323 (332)
..+...+|+|++++ +++++|||+|++|++|+|+|+.+++||+.|+|++||.+++++|||++|.+..++.+++++.++.
T Consensus 381 -~~~~~~~~~klv~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~~~~~~~~~ 458 (463)
T 2r9z_A 381 -NEHGPKTAMKLVCA-GPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEELVTLKEPVRRPGDPL 458 (463)
T ss_dssp -SSSCCCEEEEEEEE-TTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGGCCCSCSBCCC---
T ss_pred -hcCCCcEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHhhcccCCCcc
Confidence 12457799999999 7899999999999999999999999999999999999999999999999999988888777755
Q ss_pred C
Q psy3825 324 P 324 (332)
Q Consensus 324 ~ 324 (332)
.
T Consensus 459 ~ 459 (463)
T 2r9z_A 459 P 459 (463)
T ss_dssp -
T ss_pred c
Confidence 4
No 19
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.7e-37 Score=306.40 Aligned_cols=199 Identities=25% Similarity=0.412 Sum_probs=173.2
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
++++++|.||+|+|++||+++|+++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++||.||+
T Consensus 270 g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~-~~G~i~vd~~~~t~~~~IyA~GD~~-~~~~l~~~A~~~g~~aa~~i~ 347 (482)
T 1ojt_A 270 KEPQRYDAVLVAAGRAPNGKLISAEKAGVAVT-DRGFIEVDKQMRTNVPHIYAIGDIV-GQPMLAHKAVHEGHVAAENCA 347 (482)
T ss_dssp SSCEEESCEEECCCEEECGGGTTGGGTTCCCC-TTSCCCCCTTSBCSSTTEEECGGGT-CSSCCHHHHHHHHHHHHHHHT
T ss_pred ceEEEcCEEEECcCCCcCCCCCChhhcCceeC-CCCCEeeCCCcccCCCCEEEEEccc-CCCccHHHHHHHHHHHHHHHc
Confidence 56789999999999999999887889999998 789999999 999999999999999 678899999999999999999
Q ss_pred CCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCccccc
Q psy3825 91 GNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFI 170 (332)
Q Consensus 91 G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 170 (332)
|.. ..+++..+|+++|++|++|+||+||++|++. |. ++.+....+... .|+
T Consensus 348 g~~-~~~~~~~~p~~~~~~~~~a~vG~te~~a~~~-g~-~~~~~~~~~~~~---------~~~----------------- 398 (482)
T 1ojt_A 348 GHK-AYFDARVIPGVAYTSPEVAWVGETELSAKAS-AR-KITKANFPWAAS---------GRA----------------- 398 (482)
T ss_dssp TCC-CCCCCCCCCEEECSSSCEEEEECCHHHHHHH-TC-CEEEEEEEGGGC---------HHH-----------------
T ss_pred CCC-ccCCCCCCCEEEEcCCCeEEEeCCHHHHHhc-CC-CEEEEEEEcCcc---------hHH-----------------
Confidence 854 4578888999999999999999999999987 43 466554332211 111
Q ss_pred CCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcc
Q psy3825 171 PQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQR 250 (332)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
. ..+...
T Consensus 399 ----------------------------------------------------------------~---------~~~~~~ 405 (482)
T 1ojt_A 399 ----------------------------------------------------------------I---------ANGCDK 405 (482)
T ss_dssp ----------------------------------------------------------------H---------HTTCCS
T ss_pred ----------------------------------------------------------------h---------hcCCCc
Confidence 0 124567
Q ss_pred eEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 251 CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 251 ~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
||+|+++| +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+..++..
T Consensus 406 ~~~k~~~~-~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~~ 469 (482)
T 1ojt_A 406 PFTKLIFD-AETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESIGMAAEV 469 (482)
T ss_dssp CEEEEEEE-TTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSTTHHHHHHHH
T ss_pred EEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHH
Confidence 99999999 78999999999999999999999999999999999999999999999999998764
No 20
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=1.3e-37 Score=305.40 Aligned_cols=201 Identities=18% Similarity=0.303 Sum_probs=166.9
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCC---------CCCch
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHE---------KPELT 75 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g---------~~~la 75 (332)
.+.+++++++++|.||+|+|++||+++ ++++|++++ ++|+|.||+ ||||+|||||+|||+.. .++++
T Consensus 218 ~v~~~~g~~~~~D~vl~a~G~~Pn~~~--~~~~gl~~~-~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a 294 (437)
T 4eqs_A 218 EITFKSGKVEHYDMIIEGVGTHPNSKF--IESSNIKLD-RKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLA 294 (437)
T ss_dssp EEEETTSCEEECSEEEECCCEEESCGG--GTTSSCCCC-TTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSH
T ss_pred eeeecCCeEEeeeeEEEEeceecCcHH--HHhhhhhhc-cCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhH
Confidence 466778899999999999999999987 678899998 899999999 99999999999999841 24578
Q ss_pred hHHHHHHHHHHHHHhCCCCc-ccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchh
Q psy3825 76 PVAVQAGKLLAARLYGNGTT-QMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCY 154 (332)
Q Consensus 76 ~vA~~qG~vAA~nI~G~~~~-~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 154 (332)
+.|.+||+++|+||+|.+.. ..++..+|+++|++|++|+||+||+||++. | +++....+ .+
T Consensus 295 ~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~-~---~~~~~~~~---------~~----- 356 (437)
T 4eqs_A 295 WGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQF-D---YKMVEVTQ---------GA----- 356 (437)
T ss_dssp HHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGS-C---EEEEEEEE---------ES-----
T ss_pred HHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHHHHhC-C---ceEEEEec---------CC-----
Confidence 99999999999999997543 346777899999999999999999999875 3 55433211 11
Q ss_pred hhhhccccCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcc
Q psy3825 155 LKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHA 234 (332)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
++
T Consensus 357 -----~~------------------------------------------------------------------------- 358 (437)
T 4eqs_A 357 -----HA------------------------------------------------------------------------- 358 (437)
T ss_dssp -----SC-------------------------------------------------------------------------
T ss_pred -----ch-------------------------------------------------------------------------
Confidence 00
Q ss_pred cCCCcccccccCCCcceEEEEEEecCCCCcEEEEEEeCcc-HHHHHHHHHHHHHCCCCHHHHhcc-cccCCCchHHHHHH
Q psy3825 235 YYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN-AGEVIQGYAAAVKCGLTFETLEST-VGIHPTLAEEFTRV 312 (332)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~~-a~e~i~~~~~ai~~~~t~~~l~~~-~~~~Pt~~e~~~~~ 312 (332)
.|+ .+.++||+||++| +++++|||+|++|++ |+|+|+.+++||++|+|++||.++ +.+||+++++++.+
T Consensus 359 ~~~--------~~~~~g~~Kli~d-~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~~~d~v 429 (437)
T 4eqs_A 359 NYY--------PGNSPLHLRVYYD-TSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSHPKDLI 429 (437)
T ss_dssp TTS--------SSCCEEEEEEEEE-TTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSSCHH
T ss_pred hhc--------CCCCcEEEEEEEE-CCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCchHHHH
Confidence 011 1467899999999 789999999999985 999999999999999999999998 56699999987655
Q ss_pred Hh
Q psy3825 313 TI 314 (332)
Q Consensus 313 ~~ 314 (332)
.+
T Consensus 430 ~~ 431 (437)
T 4eqs_A 430 NM 431 (437)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 21
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.3e-37 Score=303.62 Aligned_cols=211 Identities=35% Similarity=0.564 Sum_probs=175.0
Q ss_pred eecCCeeE-EEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC---------------
Q psy3825 7 ASMDKVFE-DTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH--------------- 69 (332)
Q Consensus 7 v~~~dg~~-I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~--------------- 69 (332)
+.+++|++ +++|.||+|+|++||++.|+++++|+++ ++|+|.||+ +||++|+|||+|||+.
T Consensus 253 v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~--~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~ 330 (500)
T 1onf_A 253 IHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET--NNNYIVVDENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKL 330 (500)
T ss_dssp EEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB--SSSCEEECTTCBCSSSSEEECSTTEEEC-------------
T ss_pred EEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccc--cCCEEEECCCcccCCCCEEEEeccccccccccccccccccc
Confidence 44556667 9999999999999999877678899988 478999999 9999999999999981
Q ss_pred ------------------CCCCchhHHHHHHHHHHHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCE
Q psy3825 70 ------------------EKPELTPVAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNL 131 (332)
Q Consensus 70 ------------------g~~~la~vA~~qG~vAA~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~ 131 (332)
+.+++++.|.+||++||+||+|.....+++..+|+++|++|++|+||+||++|++.+|.+++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~ 410 (500)
T 1onf_A 331 YNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLIPTVIFSHPPIGTIGLSEEAAIQIYGKENV 410 (500)
T ss_dssp -----------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHTCGGGE
T ss_pred cccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCCCeEEEcCcceEEEeCCHHHHHhcCCCccE
Confidence 45689999999999999999986555678889999999999999999999999988553457
Q ss_pred EEEEeecCCccccccCCCccchhhhhhccccCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhccc
Q psy3825 132 EIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAY 211 (332)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (332)
.+....+.+.. |+
T Consensus 411 ~~~~~~~~~~~---------~~---------------------------------------------------------- 423 (500)
T 1onf_A 411 KIYESKFTNLF---------FS---------------------------------------------------------- 423 (500)
T ss_dssp EEEEEEECCGG---------GT----------------------------------------------------------
T ss_pred EEEEEECchhh---------hh----------------------------------------------------------
Confidence 76544332211 10
Q ss_pred CCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCC
Q psy3825 212 YKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLT 291 (332)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t 291 (332)
.| .++..+.+.+++||++| +++++|||+|++|++|+|+|+.+++||+.|+|
T Consensus 424 -----------------------~~-----~~~~~~~~~~~~kli~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t 474 (500)
T 1onf_A 424 -----------------------VY-----DIEPELKEKTYLKLVCV-GKDELIKGLHIIGLNADEIVQGFAVALKMNAT 474 (500)
T ss_dssp -----------------------TS-----CSCGGGSCCEEEEEEEE-TTTTEEEEEEEESTTHHHHHHHHHHHHHTTCB
T ss_pred -----------------------hc-----cccccCCCceEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHcCCC
Confidence 00 00011356799999999 78999999999999999999999999999999
Q ss_pred HHHHhcccccCCCchHHHHHHHhh
Q psy3825 292 FETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 292 ~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
++||.+++++|||++|++..+..+
T Consensus 475 ~~~l~~~~~~~Pt~~e~~~~~~~~ 498 (500)
T 1onf_A 475 KKDFDETIPIHPTAAEEFLTLQPW 498 (500)
T ss_dssp HHHHHTSCCCTTCSTTHHHHCC--
T ss_pred HHHHhccccCCCCHHHHHHHhccc
Confidence 999999999999999999876543
No 22
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=8.6e-37 Score=299.12 Aligned_cols=200 Identities=25% Similarity=0.351 Sum_probs=172.8
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
++++++|.||+|+|++||+++|+++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++||.||+
T Consensus 255 ~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~-~~G~i~vd~~~~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~aa~~i~ 332 (464)
T 2a8x_A 255 AQELKAEKVLQAIGFAPNVEGYGLDKAGVALT-DRKAIGVDDYMRTNVGHIYAIGDVN-GLLQLAHVAEAQGVVAAETIA 332 (464)
T ss_dssp EEEEEESEEEECSCEEECCSSSCHHHHTCCBC-TTSSBCCCTTSBCSSTTEEECGGGG-CSSCSHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEECCCCCccCCCCCchhcCCccC-CCCCEeECcCCccCCCCEEEeECcC-CCccCHHHHHHHHHHHHHHhc
Confidence 37899999999999999999877788899998 789999999 999999999999999 678899999999999999999
Q ss_pred CCCCcc-cccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCcccc
Q psy3825 91 GNGTTQ-MDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFF 169 (332)
Q Consensus 91 G~~~~~-~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 169 (332)
|..... +++..+|+++|++|++++||+||++|++. |. ++.+....|... .|.
T Consensus 333 g~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~-g~-~~~~~~~~~~~~---------~~~---------------- 385 (464)
T 2a8x_A 333 GAETLTLGDHRMLPRATFCQPNVASFGLTEQQARNE-GY-DVVVAKFPFTAN---------AKA---------------- 385 (464)
T ss_dssp TCCCCCCCCGGGSCEEECSSSEEEEEECCHHHHHHT-TC-CEEEEEEEGGGC---------HHH----------------
T ss_pred CCCCcccCCCCCCCEEEECCCCeEEEcCCHHHHHhc-CC-CEEEEEEEcchh---------hhh----------------
Confidence 833345 77889999999999999999999999987 53 466554333211 110
Q ss_pred cCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCc
Q psy3825 170 IPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQ 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
. ..+.+
T Consensus 386 -----------------------------------------------------------------~---------~~~~~ 391 (464)
T 2a8x_A 386 -----------------------------------------------------------------H---------GVGDP 391 (464)
T ss_dssp -----------------------------------------------------------------H---------HHTCC
T ss_pred -----------------------------------------------------------------h---------hcCCC
Confidence 0 01456
Q ss_pred ceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 250 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 250 ~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
.||+|+++| +++++|||+|++|++|.|+|+.+++||++|+|++||.+++++|||++|.+..++..
T Consensus 392 ~~~~k~~~~-~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 456 (464)
T 2a8x_A 392 SGFVKLVAD-AKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEALQECFHG 456 (464)
T ss_dssp CCEEEEEEE-TTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTTHHHHHHHHH
T ss_pred cEEEEEEEE-CCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChHHHHHHHHHH
Confidence 799999999 78999999999999999999999999999999999999999999999999998764
No 23
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.4e-36 Score=298.34 Aligned_cols=201 Identities=29% Similarity=0.494 Sum_probs=174.9
Q ss_pred CCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHH
Q psy3825 10 DKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAAR 88 (332)
Q Consensus 10 ~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~n 88 (332)
++++++++|.||+|+|++||+++|+++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++||.|
T Consensus 264 ~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~-~~G~i~vd~~~~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~aa~~ 341 (474)
T 1zmd_A 264 GKAEVITCDVLLVCIGRRPFTKNLGLEELGIELD-PRGRIPVNTRFQTKIPNIYAIGDVV-AGPMLAHKAEDEGIICVEG 341 (474)
T ss_dssp CCCEEEEESEEEECSCEEECCTTSSHHHHTCCCC-TTSCCCCCTTCBCSSTTEEECGGGS-SSCCCHHHHHHHHHHHHHH
T ss_pred CCceEEEcCEEEECcCCCcCCCcCCchhcCCccC-CCCCEEECcCCccCCCCEEEeeecC-CCCccHHHHHHHHHHHHHH
Confidence 5667899999999999999999877788899998 789999999 999999999999999 6788999999999999999
Q ss_pred HhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCccc
Q psy3825 89 LYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEF 168 (332)
Q Consensus 89 I~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 168 (332)
|+|.. ..+++..+|+++|++|++++||+||++|++. |. ++++....|... .|.
T Consensus 342 i~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~-g~-~~~~~~~~~~~~---------~~~--------------- 394 (474)
T 1zmd_A 342 MAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE-GI-EYKVGKFPFAAN---------SRA--------------- 394 (474)
T ss_dssp HTTCC-CCCCGGGCCEEECSSSEEEEEECCHHHHHHH-TC-CEEEEEEEGGGC---------HHH---------------
T ss_pred hcCCC-CcCCCCCCCEEEECCCCeEEEeCCHHHHHhc-CC-CEEEEEEecccc---------hhh---------------
Confidence 99864 4578899999999999999999999999987 53 466654433211 110
Q ss_pred ccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCC
Q psy3825 169 FIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNP 248 (332)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (332)
. ..+.
T Consensus 395 ------------------------------------------------------------------~---------~~~~ 399 (474)
T 1zmd_A 395 ------------------------------------------------------------------K---------TNAD 399 (474)
T ss_dssp ------------------------------------------------------------------H---------HTTC
T ss_pred ------------------------------------------------------------------h---------hcCC
Confidence 0 1245
Q ss_pred cceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 249 QRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 249 ~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
..||+|++++ +++++|||+|++|++|.|+|+.+++||+.|+|++||.+++++|||++|.+..++..
T Consensus 400 ~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 465 (474)
T 1zmd_A 400 TDGMVKILGQ-KSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLA 465 (474)
T ss_dssp CCCEEEEEEE-TTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTCTHHHHHHHHHH
T ss_pred CcEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHHH
Confidence 6799999999 78999999999999999999999999999999999999999999999999998764
No 24
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=2.3e-36 Score=296.33 Aligned_cols=198 Identities=25% Similarity=0.425 Sum_probs=172.5
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCC-CCCchhHHHHHHHHHHHHHh
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHE-KPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g-~~~la~vA~~qG~vAA~nI~ 90 (332)
+++++|.||+|+|++||+++|+++++|++++ ++|+|.||+ |||++|+|||+|||+ + .+++++.|..||++||.||.
T Consensus 261 ~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~-~~G~i~vd~~~~t~~~~IyA~GD~~-~~~~~~~~~A~~~g~~aa~~i~ 338 (468)
T 2qae_A 261 ETVTCEALLVSVGRRPFTGGLGLDKINVAKN-ERGFVKIGDHFETSIPDVYAIGDVV-DKGPMLAHKAEDEGVACAEILA 338 (468)
T ss_dssp EEEEESEEEECSCEEECCTTSCHHHHTCCBC-TTSCBCCCTTSBCSSTTEEECGGGB-SSSCSCHHHHHHHHHHHHHHHT
T ss_pred EEEECCEEEECCCcccCCCCCCchhcCCccC-CCCCEeECCCcccCCCCEEEeeccC-CCCCccHhHHHHHHHHHHHHHc
Confidence 6899999999999999999877888999998 789999999 999999999999999 6 68899999999999999999
Q ss_pred CCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCccccc
Q psy3825 91 GNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFI 170 (332)
Q Consensus 91 G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 170 (332)
|.. ..+++..+|+++|++|++++||+||++|++. |. ++.+....|... .|.
T Consensus 339 ~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~-g~-~~~~~~~~~~~~---------~~~----------------- 389 (468)
T 2qae_A 339 GKP-GHVNYGVIPAVIYTMPEVASVGKSEDELKKE-GV-AYKVGKFPFNAN---------SRA----------------- 389 (468)
T ss_dssp TCC-CCCCTTSCCEEECSSSEEEEEECCHHHHHHT-TC-CEEEEEEEGGGC---------HHH-----------------
T ss_pred CCC-ccCCCCCCCEEEECCCceEEEeCCHHHHHhc-CC-CEEEEEEecccc---------hhh-----------------
Confidence 854 4578889999999999999999999999987 43 466554333211 110
Q ss_pred CCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcc
Q psy3825 171 PQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQR 250 (332)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
. ..+...
T Consensus 390 ----------------------------------------------------------------~---------~~~~~~ 396 (468)
T 2qae_A 390 ----------------------------------------------------------------K---------AVSTED 396 (468)
T ss_dssp ----------------------------------------------------------------H---------HTTCCC
T ss_pred ----------------------------------------------------------------h---------hcCCCc
Confidence 0 124567
Q ss_pred eEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 251 CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 251 ~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
||+|+++| +++++|||+|++|++|.|+|+.+++||+.|+|++||.+++++|||++|.+..++..
T Consensus 397 ~~~kl~~~-~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 460 (468)
T 2qae_A 397 GFVKVLVD-KATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACMA 460 (468)
T ss_dssp CEEEEEEE-TTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTHHHHHHHHHH
T ss_pred EEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHH
Confidence 99999999 78999999999999999999999999999999999999999999999999998764
No 25
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.1e-36 Score=295.70 Aligned_cols=199 Identities=29% Similarity=0.480 Sum_probs=172.8
Q ss_pred CeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHH
Q psy3825 11 KVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARL 89 (332)
Q Consensus 11 dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI 89 (332)
+++++++|.||+|+|++||+++|+++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++||.||
T Consensus 253 ~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~-~~G~i~vd~~~~t~~~~Iya~GD~~-~~~~~~~~A~~~g~~aa~~i 330 (455)
T 1ebd_A 253 ETKTIDADYVLVTVGRRPNTDELGLEQIGIKMT-NRGLIEVDQQCRTSVPNIFAIGDIV-PGPALAHKASYEGKVAAEAI 330 (455)
T ss_dssp EEEEEEESEEEECSCEEESCSSSSTTTTTCCBC-TTSCBCCCTTCBCSSTTEEECGGGS-SSCCCHHHHHHHHHHHHHHH
T ss_pred ceeEEEcCEEEECcCCCcccCcCChhhcCCccC-CCCCEeeCCCcccCCCCEEEEeccC-CCcccHHHHHHHHHHHHHHH
Confidence 567899999999999999999877788999998 789999999 999999999999999 67889999999999999999
Q ss_pred hCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCcccc
Q psy3825 90 YGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFF 169 (332)
Q Consensus 90 ~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 169 (332)
.|.. ..+++..+|+++|++|++++||+||++|++. |. ++.+....+... .|.
T Consensus 331 ~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~-g~-~~~~~~~~~~~~---------~~~---------------- 382 (455)
T 1ebd_A 331 AGHP-SAVDYVAIPAVVFSDPECASVGYFEQQAKDE-GI-DVIAAKFPFAAN---------GRA---------------- 382 (455)
T ss_dssp TSCC-CCCCCSCCCEEECSSSCEEEEECCHHHHHTT-TC-CEEEEEEEGGGC---------HHH----------------
T ss_pred cCCC-ccCCCCCCCEEEECCCceEEEeCCHHHHHhc-CC-CEEEEEEEcCcc---------hHH----------------
Confidence 9853 4578889999999999999999999999987 43 466554332211 110
Q ss_pred cCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCc
Q psy3825 170 IPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQ 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
. ..+.+
T Consensus 383 -----------------------------------------------------------------~---------~~~~~ 388 (455)
T 1ebd_A 383 -----------------------------------------------------------------L---------ALNDT 388 (455)
T ss_dssp -----------------------------------------------------------------H---------HHTCC
T ss_pred -----------------------------------------------------------------h---------hcCCC
Confidence 0 01456
Q ss_pred ceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHh
Q psy3825 250 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTI 314 (332)
Q Consensus 250 ~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~ 314 (332)
.||+|+++| +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+.+++.
T Consensus 389 ~~~~k~~~~-~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 452 (455)
T 1ebd_A 389 DGFLKLVVR-KEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAAE 452 (455)
T ss_dssp CCEEEEEEE-TTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTHHHHHHHH
T ss_pred cEEEEEEEE-CCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHH
Confidence 799999999 7899999999999999999999999999999999999999999999999999875
No 26
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.6e-36 Score=295.20 Aligned_cols=199 Identities=27% Similarity=0.417 Sum_probs=172.7
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
++++++|.||+|+|++||+++|+++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++||.||+
T Consensus 263 ~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~-~~G~i~vd~~~~t~~~~Iya~GD~~-~~~~~~~~A~~~g~~aa~~i~ 340 (470)
T 1dxl_A 263 QTIIEADVVLVSAGRTPFTSGLNLDKIGVETD-KLGRILVNERFSTNVSGVYAIGDVI-PGPMLAHKAEEDGVACVEYLA 340 (470)
T ss_dssp CEEEEESEEECCCCEEECCTTSCCTTTTCCBC-SSSCBCCCTTCBCSSTTEEECSTTS-SSCCCHHHHHHHHHHHHHHHT
T ss_pred ceEEECCEEEECCCCCcCCCCCCchhcCCccC-CCCCEeECcCCccCCCCEEEEeccC-CCCccHHHHHHHHHHHHHHHc
Confidence 47899999999999999999887888999998 789999999 999999999999999 678899999999999999999
Q ss_pred CCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCccccc
Q psy3825 91 GNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFI 170 (332)
Q Consensus 91 G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 170 (332)
|.. ..+++..+|+++|++|++++||+||++|++. |. ++.+....+... .|.
T Consensus 341 g~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~-g~-~~~~~~~~~~~~---------~~~----------------- 391 (470)
T 1dxl_A 341 GKV-GHVDYDKVPGVVYTNPEVASVGKTEEQVKET-GV-EYRVGKFPFMAN---------SRA----------------- 391 (470)
T ss_dssp TSC-CCCCTTSCCEEECSSSEEEEEECCHHHHHHT-TC-CEEEEEEEGGGC---------HHH-----------------
T ss_pred CCC-cCCCCCCCCEEEECCCceEEEcCCHHHHHhc-CC-cEEEEEEecccc---------hHH-----------------
Confidence 854 4578889999999999999999999999987 53 466554332211 110
Q ss_pred CCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcc
Q psy3825 171 PQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQR 250 (332)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
. ..+.+.
T Consensus 392 ----------------------------------------------------------------~---------~~~~~~ 398 (470)
T 1dxl_A 392 ----------------------------------------------------------------K---------AIDNAE 398 (470)
T ss_dssp ----------------------------------------------------------------H---------HHSCCC
T ss_pred ----------------------------------------------------------------H---------hcCCCc
Confidence 0 014567
Q ss_pred eEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 251 CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 251 ~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
||+|+++| +++++|||+|++|++|.|+|+.+++||+.|+|++||.+++++|||++|.+..++..
T Consensus 399 ~~~k~~~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 462 (470)
T 1dxl_A 399 GLVKIIAE-KETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMA 462 (470)
T ss_dssp CEEEEEEE-TTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHHH
T ss_pred EEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHHH
Confidence 99999999 78999999999999999999999999999999999999999999999999998764
No 27
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=1.5e-35 Score=291.72 Aligned_cols=196 Identities=34% Similarity=0.502 Sum_probs=170.4
Q ss_pred EEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhCC
Q psy3825 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYGN 92 (332)
Q Consensus 14 ~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G~ 92 (332)
++++|.||+|+|++||+++|+++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++||.||+|.
T Consensus 257 ~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~-~~G~i~vd~~~~t~~~~Iya~GD~~-~~~~l~~~A~~~g~~aa~~i~g~ 334 (464)
T 2eq6_A 257 EVVVDKVLVAVGRKPRTEGLGLEKAGVKVD-ERGFIRVNARMETSVPGVYAIGDAA-RPPLLAHKAMREGLIAAENAAGK 334 (464)
T ss_dssp EEEESEEEECSCEEESCTTSSHHHHTCCBC-TTSCBCCCTTCBCSSTTEEECGGGT-CSSCCHHHHHHHHHHHHHHHTTC
T ss_pred EEEcCEEEECCCcccCCCCCChhhcCceec-CCCCEEECCCcccCCCCEEEEeccC-CCcccHHHHHHHHHHHHHHhcCC
Confidence 899999999999999999877788999998 789999999 999999999999999 67889999999999999999985
Q ss_pred CCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCcccccCC
Q psy3825 93 GTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIPQ 172 (332)
Q Consensus 93 ~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 172 (332)
. ..+++. +|+++|++|++++||+||++|++. |. ++.+....+... .|.
T Consensus 335 ~-~~~~~~-~p~~~~~~~~~a~vG~~e~~a~~~-g~-~~~~~~~~~~~~---------~~~------------------- 382 (464)
T 2eq6_A 335 D-SAFDYQ-VPSVVYTSPEWAGVGLTEEEAKRA-GY-KVKVGKFPLAAS---------GRA------------------- 382 (464)
T ss_dssp C-CCCCCC-CCEEECSSSEEEEEECCHHHHHHT-TC-CEEEEEEEGGGC---------HHH-------------------
T ss_pred C-cccCCC-CCeEEECCCCEEEEeCCHHHHHhc-CC-CEEEEEEEcCcc---------hhh-------------------
Confidence 4 456788 999999999999999999999987 43 355544332211 110
Q ss_pred CCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcceE
Q psy3825 173 RNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCY 252 (332)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (332)
. ..+...|+
T Consensus 383 --------------------------------------------------------------~---------~~~~~~g~ 391 (464)
T 2eq6_A 383 --------------------------------------------------------------L---------TLGGAEGM 391 (464)
T ss_dssp --------------------------------------------------------------H---------HTSCCCCE
T ss_pred --------------------------------------------------------------h---------hcCCCcEE
Confidence 0 11456799
Q ss_pred EEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 253 LKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 253 ~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
+|+++| +++++|||+|++|++|+|+|+.+++||+.|+|++||.+++++|||++|.+.+++..
T Consensus 392 ~k~~~~-~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 453 (464)
T 2eq6_A 392 VKVVGD-EETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAEA 453 (464)
T ss_dssp EEEEEE-TTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTHHHHHHHHH
T ss_pred EEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHHH
Confidence 999999 78899999999999999999999999999999999999999999999999999864
No 28
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=2.6e-35 Score=289.23 Aligned_cols=200 Identities=26% Similarity=0.432 Sum_probs=171.9
Q ss_pred CeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHH
Q psy3825 11 KVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARL 89 (332)
Q Consensus 11 dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI 89 (332)
+++++++|.||+|+|++||++.|.++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++||.||
T Consensus 270 ~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~-~~G~i~vd~~~~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~aa~~i 347 (478)
T 1v59_A 270 KQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVD-KRGRLVIDDQFNSKFPHIKVVGDVT-FGPMLAHKAEEEGIAAVEML 347 (478)
T ss_dssp EEEEEEESEEEECSCEEECCTTSCTTTTTCCBC-TTSCBCCCTTSBCSSTTEEECGGGS-SSCCCHHHHHHHHHHHHHHH
T ss_pred CceEEECCEEEECCCCCcCCCCCCchhcCceeC-CCCCEeECcCCccCCCCEEEeeccC-CCcccHHHHHHHHHHHHHHH
Confidence 567899999999999999999655788999998 789999999 999999999999999 67889999999999999999
Q ss_pred hCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCcccc
Q psy3825 90 YGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFF 169 (332)
Q Consensus 90 ~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 169 (332)
+|.. ..+++..+|+++|++|++++||+||++|++. |. ++.+....+... .|.
T Consensus 348 ~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~-g~-~~~~~~~~~~~~---------~~~---------------- 399 (478)
T 1v59_A 348 KTGH-GHVNYNNIPSVMYSHPEVAWVGKTEEQLKEA-GI-DYKIGKFPFAAN---------SRA---------------- 399 (478)
T ss_dssp HHSC-CCCCTTSCCEEECSSSEEEEEECCHHHHHHT-TC-CEEEEEEEGGGC---------HHH----------------
T ss_pred cCCC-CCCCCCCCCEEEEcCCcEEEEECCHHHHHHc-CC-CEEEEEEecccc---------hhh----------------
Confidence 9854 3478889999999999999999999999986 53 355543322110 110
Q ss_pred cCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCc
Q psy3825 170 IPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQ 249 (332)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (332)
. ..+..
T Consensus 400 -----------------------------------------------------------------~---------~~~~~ 405 (478)
T 1v59_A 400 -----------------------------------------------------------------K---------TNQDT 405 (478)
T ss_dssp -----------------------------------------------------------------H---------HTTCC
T ss_pred -----------------------------------------------------------------h---------hcCCC
Confidence 0 01346
Q ss_pred ceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 250 RCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 250 ~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
.|++|++++ +++++|||+|++|++|.|+|+.++.||+.|+|++||.+++++|||++|.+..++..
T Consensus 406 ~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~~ 470 (478)
T 1v59_A 406 EGFVKILID-SKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEANMA 470 (478)
T ss_dssp CCEEEEEEE-TTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCTTHHHHHHHHH
T ss_pred cEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCCHHHHHHHHHHH
Confidence 799999999 78899999999999999999999999999999999999999999999999998764
No 29
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.7e-35 Score=296.16 Aligned_cols=221 Identities=23% Similarity=0.306 Sum_probs=176.9
Q ss_pred eecCCee-EEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHH
Q psy3825 7 ASMDKVF-EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKL 84 (332)
Q Consensus 7 v~~~dg~-~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~v 84 (332)
+.+++|+ ++++|.||+|+|++||++. .++++|++++ ++|+|.||+ |||++|+|||+|||+ +.+++++.|..||++
T Consensus 294 v~~~~G~~~i~aD~Vv~A~G~~p~~~~-~l~~~gl~~~-~~G~i~Vd~~~~t~~~~IyA~GD~~-~~~~~~~~A~~~g~~ 370 (523)
T 1mo9_A 294 AMTPNGEMRIETDFVFLGLGEQPRSAE-LAKILGLDLG-PKGEVLVNEYLQTSVPNVYAVGDLI-GGPMEMFKARKSGCY 370 (523)
T ss_dssp EEETTEEEEEECSCEEECCCCEECCHH-HHHHHTCCBC-TTSCBCCCTTSBCSSTTEEECGGGG-CSSCSHHHHHHHHHH
T ss_pred EEECCCcEEEEcCEEEECcCCccCCcc-CHHHcCCccC-CCCCEEECCCCccCCCCEEEEeecC-CCcccHHHHHHHHHH
Confidence 4556777 8999999999999999983 2678899998 789999999 999999999999999 678899999999999
Q ss_pred HHHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCC
Q psy3825 85 LAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYK 164 (332)
Q Consensus 85 AA~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 164 (332)
||.||+|.. ..+++..+|+++|++|++++||+||++|++. |. ++.+....+... .+
T Consensus 371 aa~~i~g~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~-g~-~~~~~~~~~~~~------~~--------------- 426 (523)
T 1mo9_A 371 AARNVMGEK-ISYTPKNYPDFLHTHYEVSFLGMGEEEARAA-GH-EIVTIKMPPDTE------NG--------------- 426 (523)
T ss_dssp HHHHHTTCC-CCCCCCSCCEEEESSSEEEEEECCHHHHHHT-TC-CEEEEEESCCST------TT---------------
T ss_pred HHHHHcCCC-CCCCCCCCCeEEECCCceEEEeCCHHHHHhC-CC-CEEEEEEecccc------cc---------------
Confidence 999999854 4567888999999999999999999999987 43 366654333210 00
Q ss_pred CcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccc
Q psy3825 165 PTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIP 244 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
.+..+|.++ +. ..++.++|
T Consensus 427 --------------------------~~~~~~~~~------------------------~~-----~~~~~~~~------ 445 (523)
T 1mo9_A 427 --------------------------LNVALPASD------------------------RT-----MLYAFGKG------ 445 (523)
T ss_dssp --------------------------TCSSCSCCT------------------------TT-----HHHHHSTT------
T ss_pred --------------------------ccccccccc------------------------cc-----ccceEEee------
Confidence 001112211 00 00112210
Q ss_pred cCCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcc--cccCCCchHHHHHHHhhhc
Q psy3825 245 QRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLEST--VGIHPTLAEEFTRVTITKR 317 (332)
Q Consensus 245 ~~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~--~~~~Pt~~e~~~~~~~~~~ 317 (332)
.+.+.||+|+++| +++++|||+|++|++|.|+|+.+++||+.|+|++||.++ +++|||++|.+.++....+
T Consensus 446 -~~~~~~~~k~~~~-~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~~Pt~~e~~~~~~~~~~ 518 (523)
T 1mo9_A 446 -TAHMSGFQKIVID-AKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTVDELGDMDELFLNPTHFIQLSRLRAGSK 518 (523)
T ss_dssp -TGGGGCEEEEEEE-TTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSCCHHHHHHHHTTCS
T ss_pred -cCCCCEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHhCCcceECCCHHHHHHHHHHhhH
Confidence 0356899999999 789999999999999999999999999999999999999 9999999999999887543
No 30
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=9.4e-35 Score=284.88 Aligned_cols=210 Identities=28% Similarity=0.389 Sum_probs=177.0
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
+.++++|.||+|+|++||++.|.++++|++++ ++|+|.||+ +||+.|+|||+|||+ +.+++++.|..||+++|.||+
T Consensus 255 ~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~-~~G~i~vd~~~~t~~~~iya~GD~~-~~~~~~~~A~~~g~~aa~~i~ 332 (467)
T 1zk7_A 255 HGELRADKLLVATGRTPNTRSLALDAAGVTVN-AQGAIVIDQGMRTSNPNIYAAGDCT-DQPQFVYVAAAAGTRAAINMT 332 (467)
T ss_dssp TEEEEESEEEECSCEEESCTTSCGGGGTCCBC-TTSCBCCCTTCBCSSTTEEECSTTB-SSCCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEcCEEEECCCCCcCCCcCCchhcCCcCC-CCCCEEECCCcccCCCCEEEEeccC-CCcccHHHHHHHHHHHHHHHc
Confidence 35799999999999999999877788999998 789999999 999999999999999 678899999999999999999
Q ss_pred CCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCccccc
Q psy3825 91 GNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFI 170 (332)
Q Consensus 91 G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 170 (332)
+.. ...++..+|+++|++|++++||+||++|++. |. ++.+....+.. ..|.
T Consensus 333 ~~~-~~~~~~~~p~~~~~~~~~a~vG~~~~~a~~~-g~-~~~~~~~~~~~---------~~~~----------------- 383 (467)
T 1zk7_A 333 GGD-AALDLTAMPAVVFTDPQVATVGYSEAEAHHD-GI-ETDSRTLTLDN---------VPRA----------------- 383 (467)
T ss_dssp TCC-CCCCCTTCEEEECSSSEEEEEECCHHHHHHT-TC-CEEEEEEEGGG---------CHHH-----------------
T ss_pred CCC-cccCCCCCCEEEecCCceEEEecCHHHHHhc-CC-CeEEEEEeccc---------chhh-----------------
Confidence 863 4567888999999999999999999999987 53 35554332211 0110
Q ss_pred CCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcc
Q psy3825 171 PQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQR 250 (332)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (332)
+ ..+...
T Consensus 384 ----------------------------------------------------------------~---------~~~~~~ 390 (467)
T 1zk7_A 384 ----------------------------------------------------------------L---------ANFDTR 390 (467)
T ss_dssp ----------------------------------------------------------------H---------HTTCCC
T ss_pred ----------------------------------------------------------------h---------hcCCCc
Confidence 0 124567
Q ss_pred eEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhhhccCCCCCC-CcccC
Q psy3825 251 CYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTITKRSGEDPTP-QSCCR 329 (332)
Q Consensus 251 ~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~~~~~~~~~-~~~~~ 329 (332)
||+|++++ +++++|||+|++|++|+|+|+.+++||++|+|++||.+++++|||++|.+.+++... . .+.+ ++||.
T Consensus 391 ~~~kl~~~-~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~~~--~-~~~~~~~~~~ 466 (467)
T 1zk7_A 391 GFIKLVIE-EGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTF--N-KDVKQLSCCA 466 (467)
T ss_dssp CEEEEEEE-TTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTTHHHHHHHHTT--T-SCGGGTTTSC
T ss_pred EEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHHHH--h-hhhhhhhhhc
Confidence 99999999 789999999999999999999999999999999999999999999999999998742 2 3344 67774
No 31
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.1e-35 Score=286.97 Aligned_cols=200 Identities=25% Similarity=0.335 Sum_probs=166.5
Q ss_pred CCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC------CC---CCchhHHH
Q psy3825 10 DKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH------EK---PELTPVAV 79 (332)
Q Consensus 10 ~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~------g~---~~la~vA~ 79 (332)
.+++++++|.||+|+|++||+++ ++++|++++ ++|+|.||+ +||++|+|||+|||+. |. +++++.|.
T Consensus 226 ~~g~~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~-~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~ 302 (449)
T 3kd9_A 226 TDAGEYKAELVILATGIKPNIEL--AKQLGVRIG-ETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGN 302 (449)
T ss_dssp ETTEEEECSEEEECSCEEECCHH--HHHTTCCBC-TTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHH
T ss_pred eCCCEEECCEEEEeeCCccCHHH--HHhCCccCC-CCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHH
Confidence 34578999999999999999987 678899998 789999999 9999999999999984 22 57899999
Q ss_pred HHHHHHHHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhc
Q psy3825 80 QAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIY 159 (332)
Q Consensus 80 ~qG~vAA~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 159 (332)
.||+++|.||+|.......+..+|+++|++|++++||+||+||++. |. ++.+.. +. ..+ |
T Consensus 303 ~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~-g~-~~~~~~--~~-------~~~--~------- 362 (449)
T 3kd9_A 303 KMGYVAGSNIAGKELHFPGVLGTAVTKFMDVEIGKTGLTEMEALKE-GY-DVRTAF--IK-------AST--R------- 362 (449)
T ss_dssp HHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHT-TC-CEEEEE--EE-------EES--S-------
T ss_pred HHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHHHHHHC-CC-ceEEEE--Ee-------cCC--c-------
Confidence 9999999999987654334556789999999999999999999987 43 233321 21 000 0
Q ss_pred cccCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCc
Q psy3825 160 HAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPT 239 (332)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (332)
+.++|
T Consensus 363 --------------------------------------------------------------------------~~~~~- 367 (449)
T 3kd9_A 363 --------------------------------------------------------------------------PHYYP- 367 (449)
T ss_dssp --------------------------------------------------------------------------CTTST-
T ss_pred --------------------------------------------------------------------------cccCC-
Confidence 00111
Q ss_pred ccccccCCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcc-cccCCCchHHHHHHHhh
Q psy3825 240 EFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLEST-VGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 240 ~~~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~-~~~~Pt~~e~~~~~~~~ 315 (332)
+.+.||+||++| +++++|||+|++|++|+|+|+.+++||++|+|++||.++ +++||++++.++.+.+.
T Consensus 368 -------~~~~~~~kli~~-~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~~~~~~~~ 436 (449)
T 3kd9_A 368 -------GGREIWLKGVVD-NETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAPVWDPLIVL 436 (449)
T ss_dssp -------TCCEEEEEEEEE-TTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBCSSCHHHHH
T ss_pred -------CCceEEEEEEEE-CCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCCchhHHHHH
Confidence 457899999999 789999999999999999999999999999999999998 88999999998887664
No 32
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.8e-34 Score=279.90 Aligned_cols=197 Identities=25% Similarity=0.399 Sum_probs=170.0
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhC
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G 91 (332)
+++++|.||+|+|++||+++|+++++|++++ ++ +|.||+ |||+.|+|||+|||+ +.+++++.|..||+.||.||.|
T Consensus 253 ~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~-~~-~i~vd~~~~t~~~~Iya~GD~~-~~~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 253 LRLEADRVLVAVGRRPRTKGFNLECLDLKMN-GA-AIAIDERCQTSMHNVWAIGDVA-GEPMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp CEECCSCEEECCCEEECCSSSSGGGSCCCEE-TT-EECCCTTCBCSSTTEEECGGGG-CSSCCHHHHHHHHHHHHHHHTT
T ss_pred EEEECCEEEECcCCCcCCCCCCcHhcCCccc-CC-EEeECCCCcCCCCCEEEeeccC-CCcccHHHHHHHHHHHHHHhcC
Confidence 6899999999999999999877788999998 66 899999 999999999999999 6788999999999999999998
Q ss_pred CCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCcccccC
Q psy3825 92 NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPTEFFIP 171 (332)
Q Consensus 92 ~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 171 (332)
.. ..+++..+|+++|++|++++||++|++|++. |. ++.+....+.. ..|.
T Consensus 330 ~~-~~~~~~~~p~~~~~~p~~a~vG~~e~~a~~~-g~-~~~~~~~~~~~---------~~~~------------------ 379 (458)
T 1lvl_A 330 KA-RRFEPAAIAAVCFTDPEVVVVGKTPEQASQQ-GL-DCIVAQFPFAA---------NGRA------------------ 379 (458)
T ss_dssp CC-CCCCCSCCCEEECSSSEEEEEECCHHHHHHT-TC-CEEEEEEEGGG---------CHHH------------------
T ss_pred CC-ccCCCCCCCEEEECCCCeEEEeCCHHHHHHc-CC-CEEEEEEECcc---------chhh------------------
Confidence 54 4577888999999999999999999999987 53 35554332211 0010
Q ss_pred CCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccCCCcce
Q psy3825 172 QRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRC 251 (332)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (332)
. ..+...|
T Consensus 380 ---------------------------------------------------------------~---------~~~~~~g 387 (458)
T 1lvl_A 380 ---------------------------------------------------------------M---------SLESKSG 387 (458)
T ss_dssp ---------------------------------------------------------------H---------HTTCCCC
T ss_pred ---------------------------------------------------------------h---------hcCCCcE
Confidence 0 1145679
Q ss_pred EEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 252 YLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 252 ~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
++|+++| +++++|||+|++|++|.|+|+.+++||+.|+|++||.+++++|||++|.+..++..
T Consensus 388 ~~kl~~d-~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~~ 450 (458)
T 1lvl_A 388 FVRVVAR-RDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEAVQEAALR 450 (458)
T ss_dssp EEEEEEE-TTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTHHHHHHHHH
T ss_pred EEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHHH
Confidence 9999999 78999999999999999999999999999999999999999999999999998764
No 33
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.3e-33 Score=275.84 Aligned_cols=203 Identities=28% Similarity=0.429 Sum_probs=173.8
Q ss_pred ecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHH
Q psy3825 8 SMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLA 86 (332)
Q Consensus 8 ~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA 86 (332)
.+++++++++|.||+|+|++||+++|+++++|++++ ++|+|.||+ +||+.|+|||+|||+ +.+++++.|..||+.+|
T Consensus 244 ~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~-~~g~i~vd~~~~t~~~~iya~GD~~-~~~~~~~~A~~~g~~aa 321 (455)
T 2yqu_A 244 ELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTD-ERGRIPVDEHLRTRVPHIYAIGDVV-RGPMLAHKASEEGIAAV 321 (455)
T ss_dssp EETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCC-TTSCCCCCTTSBCSSTTEEECGGGS-SSCCCHHHHHHHHHHHH
T ss_pred EECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccC-CCCcEeECCCcccCCCCEEEEecCC-CCccCHHHHHHhHHHHH
Confidence 344677899999999999999999877788899997 789999999 999999999999999 67889999999999999
Q ss_pred HHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCCCc
Q psy3825 87 ARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYKPT 166 (332)
Q Consensus 87 ~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 166 (332)
.||.|.. ..+++..+|+++|++|++++||++|++|++. |. ++.+....+.. ..|.
T Consensus 322 ~~i~~~~-~~~~~~~~p~~~~~~~~~a~~G~~~~~a~~~-g~-~~~~~~~~~~~---------~~~~------------- 376 (455)
T 2yqu_A 322 EHMVRGF-GHVDYQAIPSVVYTHPEIAAVGYTEEELKAQ-GI-PYKVGKFPYSA---------SGRA------------- 376 (455)
T ss_dssp HHHHHSC-CCCCGGGCCEEECSSSEEEEEECCHHHHHHH-TC-CEEEEEEEGGG---------CHHH-------------
T ss_pred HHHcCCC-ccCCCCCCCEEEEcCCceEEEECCHHHHHHc-CC-CEEEEEEEccc---------chHH-------------
Confidence 9999853 4577888999999999999999999999987 53 35554332211 0110
Q ss_pred ccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccccC
Q psy3825 167 EFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQR 246 (332)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (332)
. ..
T Consensus 377 --------------------------------------------------------------------~---------~~ 379 (455)
T 2yqu_A 377 --------------------------------------------------------------------R---------AM 379 (455)
T ss_dssp --------------------------------------------------------------------H---------HH
T ss_pred --------------------------------------------------------------------H---------hc
Confidence 0 01
Q ss_pred CCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHhh
Q psy3825 247 NPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 247 ~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~ 315 (332)
+.+.+++|+++| +++++|||+|++|++|.|+|+.+++||++|+|+++|.+++++|||++|.+..++..
T Consensus 380 ~~~~~~~k~~~~-~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~~~~~~~~ 447 (455)
T 2yqu_A 380 GETEGFIKVLAH-AKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEAALA 447 (455)
T ss_dssp TCCCCEEEEEEE-TTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHHHHHHHHHH
T ss_pred CCCcEEEEEEEE-CCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHHH
Confidence 356799999999 78899999999999999999999999999999999999999999999999998764
No 34
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=4e-34 Score=280.79 Aligned_cols=203 Identities=21% Similarity=0.235 Sum_probs=154.6
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC------CC---CCchh
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH------EK---PELTP 76 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~------g~---~~la~ 76 (332)
+.+++++++++|.||+|+|++||+++ ++++|++++ ++|+|.||+ +||++|+|||+|||+. +. +++++
T Consensus 237 v~~~~g~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~-~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~ 313 (472)
T 3iwa_A 237 RVITDKRTLDADLVILAAGVSPNTQL--ARDAGLELD-PRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGS 313 (472)
T ss_dssp EEEESSCEEECSEEEECSCEEECCHH--HHHHTCCBC-TTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTT
T ss_pred EEEeCCCEEEcCEEEECCCCCcCHHH--HHhCCccCC-CCCCEEECCCcccCCCCEEEeccceecccccCCceeecchHH
Confidence 44556778999999999999999986 567899998 789999999 9999999999999983 22 45889
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhh
Q psy3825 77 VAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLK 156 (332)
Q Consensus 77 vA~~qG~vAA~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 156 (332)
.|..||++||+||+|...........+++.|++|++++||+||+||++. |. ++.+.. +. ..+ |
T Consensus 314 ~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~-g~-~~~~~~--~~-------~~~--~---- 376 (472)
T 3iwa_A 314 MANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALRE-GY-DAVNVH--VE-------QFD--R---- 376 (472)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCEEEEEECCHHHHHHT-TC-CEEEEE--EE-------C---------
T ss_pred HHHHHHHHHHHHhcCCCccCCCCCcceEEEECCceeEEEECCHHHHHHc-CC-ceEEEE--Ee-------cCC--c----
Confidence 9999999999999986543222333456678999999999999999987 53 344322 11 011 1
Q ss_pred hhccccCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccC
Q psy3825 157 FIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYY 236 (332)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
+.+
T Consensus 377 -----------------------------------------------------------------------------~~~ 379 (472)
T 3iwa_A 377 -----------------------------------------------------------------------------AHF 379 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------------------------------------------------cCc
Confidence 011
Q ss_pred CCcccccccCCCcceEEEEEEecCCCCcEEEEEEeCc---cHHHHHHHHHHHHHCCCCHHHHhcccccC-CCchHHHHHH
Q psy3825 237 KPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGP---NAGEVIQGYAAAVKCGLTFETLESTVGIH-PTLAEEFTRV 312 (332)
Q Consensus 237 ~~~~~~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~---~a~e~i~~~~~ai~~~~t~~~l~~~~~~~-Pt~~e~~~~~ 312 (332)
+| +.++||+||++| +++++|||+|++|+ .|+|+|+.+++||++|+|++||.+++++| ||++|.++.+
T Consensus 380 ~~--------~~~~~~~kli~~-~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~~~ 450 (472)
T 3iwa_A 380 YP--------EKTIMTLQLVVD-RPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVVYSPPFASAMDIV 450 (472)
T ss_dssp -------------CEEEEEEEE-TTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC--------CCHH
T ss_pred cC--------CCceEEEEEEEE-CCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhcccccCCCCCCCcccHH
Confidence 11 457899999999 78999999999999 46999999999999999999999999887 9999999887
Q ss_pred Hhh
Q psy3825 313 TIT 315 (332)
Q Consensus 313 ~~~ 315 (332)
.+.
T Consensus 451 ~~~ 453 (472)
T 3iwa_A 451 NVA 453 (472)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 35
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=3.7e-34 Score=280.01 Aligned_cols=198 Identities=20% Similarity=0.231 Sum_probs=160.3
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCC---------CCchh
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEK---------PELTP 76 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~---------~~la~ 76 (332)
+.++++ ++++|.||+|+|++||++++ +.. ++++ ++|+|.||+ |||++|+|||+|||+... .++++
T Consensus 224 v~~~~g-~i~aD~Vv~A~G~~p~~~~l--~~~-~~~~-~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~ 298 (452)
T 3oc4_A 224 LETSEQ-EISCDSGIFALNLHPQLAYL--DKK-IQRN-LDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVN 298 (452)
T ss_dssp EEESSC-EEEESEEEECSCCBCCCSSC--CTT-SCBC-TTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHH
T ss_pred EEECCC-EEEeCEEEECcCCCCChHHH--Hhh-hccC-CCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHH
Confidence 344455 89999999999999999974 443 8888 789999999 999999999999998421 36899
Q ss_pred HHHHHHHHHHHHHhCCCCcc-cccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhh
Q psy3825 77 VAVQAGKLLAARLYGNGTTQ-MDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYL 155 (332)
Q Consensus 77 vA~~qG~vAA~nI~G~~~~~-~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 155 (332)
.|..||++||.||+|..... ..+..+|+.+|+ +++++||+||+||++. |. ++++....+ .. |
T Consensus 299 ~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~-~~~a~vG~te~~a~~~-g~-~~~~~~~~~---------~~--~--- 361 (452)
T 3oc4_A 299 NAVRTGLVVANNLEEKTHRFIGSLRTMGTKVGD-YYLASTGLTETEGLFF-PQ-TLASIIVRQ---------PA--P--- 361 (452)
T ss_dssp HHHHHHHHHTTSSSSCCCCCCCCCCCEEEEETT-EEEEEEECCSGGGGGS-SS-CEEEEEEEE---------EC--T---
T ss_pred HHHHHHHHHHHHhcCCCccCCCccccEEEEEcC-eeEEEecCCHHHHHHC-CC-ceEEEEEec---------CC--c---
Confidence 99999999999999865332 256678888885 7999999999999876 53 344432111 00 0
Q ss_pred hhhccccCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhccc
Q psy3825 156 KFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAY 235 (332)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
+
T Consensus 362 ------------------------------------------------------------------------------~- 362 (452)
T 3oc4_A 362 ------------------------------------------------------------------------------P- 362 (452)
T ss_dssp ------------------------------------------------------------------------------T-
T ss_pred ------------------------------------------------------------------------------c-
Confidence 0
Q ss_pred CCCcccccccCCCcceEEEEEEecCCCCcEEEEEEeCc-cHHHHHHHHHHHHHCCCCHHHHhcc-cccCCCchHHHHHHH
Q psy3825 236 YKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGP-NAGEVIQGYAAAVKCGLTFETLEST-VGIHPTLAEEFTRVT 313 (332)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~-~a~e~i~~~~~ai~~~~t~~~l~~~-~~~~Pt~~e~~~~~~ 313 (332)
..+.+.||+||++| +++++|||+|++|+ +|+|+|+.+++||++|+|++||.++ +++|||++|.++.+.
T Consensus 363 ---------~~~~~~~~~kli~~-~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~~~~ 432 (452)
T 3oc4_A 363 ---------LQHGTEILGKLIYD-KVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTNIYDITN 432 (452)
T ss_dssp ---------TTCSCEEEEEEEEE-TTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSCSSCHHH
T ss_pred ---------CCCCCeEEEEEEEE-CCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCCchhHHH
Confidence 01357899999999 78999999999999 7999999999999999999999998 899999999777665
Q ss_pred hh
Q psy3825 314 IT 315 (332)
Q Consensus 314 ~~ 315 (332)
+.
T Consensus 433 ~a 434 (452)
T 3oc4_A 433 LM 434 (452)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 36
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.2e-32 Score=277.57 Aligned_cols=201 Identities=21% Similarity=0.266 Sum_probs=160.1
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC------CC---CCch
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH------EK---PELT 75 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~------g~---~~la 75 (332)
++.+.+++++++|.||+|+|++||+++ ++++|++++ ++|+|.||+ +||++|+|||+|||+. +. ++++
T Consensus 260 ~v~~~~g~~i~~D~Vi~a~G~~p~~~~--l~~~g~~~~-~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~ 336 (588)
T 3ics_A 260 VVRLKSGSVIQTDMLILAIGVQPESSL--AKGAGLALG-VRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLA 336 (588)
T ss_dssp EEEETTSCEEECSEEEECSCEEECCHH--HHHTTCCBC-GGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCH
T ss_pred EEEECCCCEEEcCEEEEccCCCCChHH--HHhcCceEc-CCCCEEECCccccCCCCEEEeeeeeecccccCCcccccccH
Confidence 456677889999999999999999987 678899998 789999999 9999999999999984 22 4689
Q ss_pred hHHHHHHHHHHHHHhC-CCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchh
Q psy3825 76 PVAVQAGKLLAARLYG-NGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCY 154 (332)
Q Consensus 76 ~vA~~qG~vAA~nI~G-~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 154 (332)
+.|..||++||+||+| ...........+...|++|++|+||+||+||++. |. ++.+.. +.+ .+ |
T Consensus 337 ~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~-g~-~~~~~~--~~~-------~~--~-- 401 (588)
T 3ics_A 337 WPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRL-NI-PYEVVH--VQA-------NS--H-- 401 (588)
T ss_dssp HHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEEEEEEECCHHHHHHT-TC-CCEEEE--EEE-------ES--S--
T ss_pred HHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeEEEEecCCHHHHHHc-CC-CeEEEE--Eec-------CC--c--
Confidence 9999999999999998 4432212222345568999999999999999997 53 244322 110 00 0
Q ss_pred hhhhccccCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcc
Q psy3825 155 LKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHA 234 (332)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
+
T Consensus 402 ------~------------------------------------------------------------------------- 402 (588)
T 3ics_A 402 ------A------------------------------------------------------------------------- 402 (588)
T ss_dssp ------C-------------------------------------------------------------------------
T ss_pred ------c-------------------------------------------------------------------------
Confidence 0
Q ss_pred cCCCcccccccCCCcceEEEEEEecCCCCcEEEEEEeCcc-HHHHHHHHHHHHHCCCCHHHHhcccccC-CCchHHHHHH
Q psy3825 235 YYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN-AGEVIQGYAAAVKCGLTFETLESTVGIH-PTLAEEFTRV 312 (332)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~~-a~e~i~~~~~ai~~~~t~~~l~~~~~~~-Pt~~e~~~~~ 312 (332)
.+ ..+.++||+||++| +++++|||+|++|++ |+|+|+.+++||++|+|++||.++++.| |++++....+
T Consensus 403 ~~--------~~~~~~~~~k~i~~-~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~d~i 473 (588)
T 3ics_A 403 GY--------YPNATPVLIKLIFN-KDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLPDLELSYAPPYSSAKDPV 473 (588)
T ss_dssp TT--------STTCCEEEEEEEEC-TTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGGGCCCCCSTTTCCSSCHH
T ss_pred cc--------CCCCceEEEEEEEE-CCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhhhhhhccCCCcccccchh
Confidence 00 12457899999999 789999999999985 8999999999999999999999998877 9987755543
No 37
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.1e-32 Score=274.85 Aligned_cols=201 Identities=22% Similarity=0.322 Sum_probs=160.1
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC------CC---CCchh
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH------EK---PELTP 76 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~------g~---~~la~ 76 (332)
+..++++++++|.||+|+|++||+++ ++++|++++ ++|+|.||+ +||++|+|||+|||+. +. +++++
T Consensus 246 v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~~g~~~~-~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~ 322 (565)
T 3ntd_A 246 LTLSNGELLETDLLIMAIGVRPETQL--ARDAGLAIG-ELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAG 322 (565)
T ss_dssp EEETTSCEEEESEEEECSCEEECCHH--HHHHTCCBC-TTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHH
T ss_pred EEEcCCCEEEcCEEEECcCCccchHH--HHhCCcccC-CCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHH
Confidence 34466778999999999999999986 577899998 789999999 9999999999999983 22 35789
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhh
Q psy3825 77 VAVQAGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLK 156 (332)
Q Consensus 77 vA~~qG~vAA~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 156 (332)
.|..||++||+||+|...........+++.|++|++++||+||+||++. |.+ +++.. +. ..+ |
T Consensus 323 ~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~-g~~-~~~~~--~~-------~~~--~---- 385 (565)
T 3ntd_A 323 PANRQGRMAADNMFGREERYQGTQGTAICKVFDLAVGATGKNEKQLKQA-GIA-FEKVY--VH-------TAS--H---- 385 (565)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHT-TCC-CEEEE--EE-------EES--S----
T ss_pred HHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCHHHHHHc-CCC-eEEEE--Ee-------cCc--c----
Confidence 9999999999999986544223334456779999999999999999987 533 33221 11 000 0
Q ss_pred hhccccCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccC
Q psy3825 157 FIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYY 236 (332)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
+.|
T Consensus 386 -----------------------------------------------------------------------------~~~ 388 (565)
T 3ntd_A 386 -----------------------------------------------------------------------------ASY 388 (565)
T ss_dssp -----------------------------------------------------------------------------CTT
T ss_pred -----------------------------------------------------------------------------cCc
Confidence 011
Q ss_pred CCcccccccCCCcceEEEEEEecCCCCcEEEEEEeCccH-HHHHHHHHHHHHCCCCHHHHhccc-ccCCCchHHHHHHH
Q psy3825 237 KPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNA-GEVIQGYAAAVKCGLTFETLESTV-GIHPTLAEEFTRVT 313 (332)
Q Consensus 237 ~~~~~~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~~a-~e~i~~~~~ai~~~~t~~~l~~~~-~~~Pt~~e~~~~~~ 313 (332)
+| +.+.||+||++| +++++|||+|++|++| +|+|+.+++||++|+|++||.++. .+||++++.+..+.
T Consensus 389 ~~--------~~~~~~~k~v~~-~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~~~~~l~~~~~~~~P~~~~~~~~i~ 458 (565)
T 3ntd_A 389 YP--------GAEVVSFKLLFD-PVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTVEQLQHLELSYAPPYGSAKDVIN 458 (565)
T ss_dssp ST--------TCCEEEEEEEEC-TTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBHHHHTTCCCCCCTTTCCSSCHHH
T ss_pred CC--------CCceEEEEEEEE-CCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCcccCchhhhhh
Confidence 12 456899999999 7899999999999998 999999999999999999999985 56799986655443
No 38
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=2.3e-32 Score=266.97 Aligned_cols=198 Identities=18% Similarity=0.230 Sum_probs=161.7
Q ss_pred CeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCC---------CCCchhHHHH
Q psy3825 11 KVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHE---------KPELTPVAVQ 80 (332)
Q Consensus 11 dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g---------~~~la~vA~~ 80 (332)
+++++++|.||+|+|++||+++ ++++ ++++ ++|+|.||+ |||++|+|||+|||+.. .+++++.|..
T Consensus 230 ~g~~i~~D~vv~a~G~~p~~~l--l~~~-l~~~-~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~ 305 (452)
T 2cdu_A 230 DGKEIKSDIAILCIGFRPNTEL--LKGK-VAML-DNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVR 305 (452)
T ss_dssp TSCEEEESEEEECCCEEECCGG--GTTT-SCBC-TTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHH
T ss_pred CCCEEECCEEEECcCCCCCHHH--HHHh-hhcC-CCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHH
Confidence 5678999999999999999986 5666 8887 789999999 99999999999999841 1478999999
Q ss_pred HHHHHHHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhcc
Q psy3825 81 AGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYH 160 (332)
Q Consensus 81 qG~vAA~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 160 (332)
||++||+||+|......++...+++.+++|++++||+||++|++. |. ++.+.. |+.. .+.
T Consensus 306 ~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~-g~-~~~~~~--~~~~-----~~~----------- 365 (452)
T 2cdu_A 306 QGRLVGLNLTEDKVKDMGTQSSSGLKLYGRTYVSTGINTALAKAN-NL-KVSEVI--IADN-----YRP----------- 365 (452)
T ss_dssp HHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHT-TC-CCEEEE--EEEE-----SSC-----------
T ss_pred HHHHHHHHhCCCCCcCCCccceEEEEECCeeeEeecCCHHHHHHc-CC-ceEEEE--EecC-----Ccc-----------
Confidence 999999999986533344556788889999999999999999986 43 233321 1100 000
Q ss_pred ccCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcc
Q psy3825 161 AYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTE 240 (332)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (332)
.++|
T Consensus 366 --------------------------------------------------------------------------~~~~-- 369 (452)
T 2cdu_A 366 --------------------------------------------------------------------------EFML-- 369 (452)
T ss_dssp --------------------------------------------------------------------------TTBS--
T ss_pred --------------------------------------------------------------------------ccCC--
Confidence 0111
Q ss_pred cccccCCCcceEEEEEEecCCCCcEEEEEEeCc-cHHHHHHHHHHHHHCCCCHHHHhcc-cccCCCchHHHHHHHhh
Q psy3825 241 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGP-NAGEVIQGYAAAVKCGLTFETLEST-VGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 241 ~~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~-~a~e~i~~~~~ai~~~~t~~~l~~~-~~~~Pt~~e~~~~~~~~ 315 (332)
+...+++|++++ +++++|||+|++|+ +|+|+|+.++.||++|+|+++|..+ +++|||++|.+..+.+.
T Consensus 370 ------~~~~~~~k~~~~-~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~a 439 (452)
T 2cdu_A 370 ------STDEVLMSLVYD-PKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDRPFNYLNIL 439 (452)
T ss_dssp ------CCCEEEEEEEEC-TTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCCSSCHHHHH
T ss_pred ------CCceEEEEEEEE-CCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCchHHHHHHH
Confidence 346799999999 78899999999999 8999999999999999999999986 99999999998877654
No 39
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.98 E-value=1.1e-31 Score=265.19 Aligned_cols=198 Identities=20% Similarity=0.288 Sum_probs=163.5
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC------CC---CCchhHHHHH
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH------EK---PELTPVAVQA 81 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~------g~---~~la~vA~~q 81 (332)
+.++++|.||+|+|++||+++ ++++|++++ ++|+|.||+ +||++|+|||+|||+. +. +++++.|..|
T Consensus 266 ~~~i~~D~vi~a~G~~p~~~~--l~~~g~~~~-~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~q 342 (480)
T 3cgb_A 266 KGTYKADLVLVSVGVKPNTDF--LEGTNIRTN-HKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQ 342 (480)
T ss_dssp TEEEECSEEEECSCEEESCGG--GTTSCCCBC-TTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHH
T ss_pred CCEEEcCEEEECcCCCcChHH--HHhCCcccC-CCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHH
Confidence 357999999999999999987 678899998 789999999 9999999999999984 11 2679999999
Q ss_pred HHHHHHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccc
Q psy3825 82 GKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHA 161 (332)
Q Consensus 82 G~vAA~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 161 (332)
|++||.||+|......++..+|+++|++|++++||+||++|++. |. ++.+..... ..+.
T Consensus 343 g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~-g~-~~~~~~~~~-------~~~~------------ 401 (480)
T 3cgb_A 343 GRLAGLNMLDKRRAFKGTLGTGIIKFMNLTLARTGLNEKEAKGL-HI-PYKTVKVDS-------TNMA------------ 401 (480)
T ss_dssp HHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHT-TC-CEEEEEEEE-------ESSC------------
T ss_pred HHHHHHHhcCCCccCCCccceeEEEECCcEEEEeCCCHHHHHHc-CC-ceEEEEEec-------CCcc------------
Confidence 99999999986543335667899999999999999999999986 43 244322100 0000
Q ss_pred cCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCccc
Q psy3825 162 YYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEF 241 (332)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (332)
.++|
T Consensus 402 -------------------------------------------------------------------------~~~~--- 405 (480)
T 3cgb_A 402 -------------------------------------------------------------------------GYYP--- 405 (480)
T ss_dssp -------------------------------------------------------------------------TTST---
T ss_pred -------------------------------------------------------------------------cccC---
Confidence 0111
Q ss_pred ccccCCCcceEEEEEEecCCCCcEEEEEEeCcc-HHHHHHHHHHHHHCCCCHHHHhcc-cccCCCchHHHHHHHhh
Q psy3825 242 FIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN-AGEVIQGYAAAVKCGLTFETLEST-VGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 242 ~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~~-a~e~i~~~~~ai~~~~t~~~l~~~-~~~~Pt~~e~~~~~~~~ 315 (332)
+.+.||+|++++ +++++|||+|++|++ |+|+|+.+++||+.|+|+++|.++ +++|||++|.+..+.+.
T Consensus 406 -----~~~~~~~kl~~~-~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~a 475 (480)
T 3cgb_A 406 -----NAKPLYLKLLYR-SDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAPPYNSVWDPIQQA 475 (480)
T ss_dssp -----TCCEEEEEEEEE-TTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSSCHHHHH
T ss_pred -----CCceEEEEEEEE-CCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCCCCCCchhHHHHH
Confidence 356799999999 788999999999998 999999999999999999999996 78999999998887664
No 40
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=8.8e-32 Score=262.45 Aligned_cols=198 Identities=20% Similarity=0.304 Sum_probs=161.9
Q ss_pred CeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC------C---CCCchhHHHH
Q psy3825 11 KVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH------E---KPELTPVAVQ 80 (332)
Q Consensus 11 dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~------g---~~~la~vA~~ 80 (332)
+++++++|.||+|+|++||+++ +++. ++++ ++|+|.||+ |||+.|+|||+|||+. + .+++++.|..
T Consensus 229 ~~~~i~~d~vi~a~G~~p~~~~--~~~~-~~~~-~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~ 304 (447)
T 1nhp_A 229 DKNAYDADLVVVAVGVRPNTAW--LKGT-LELH-PNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARK 304 (447)
T ss_dssp SSCEEECSEEEECSCEEESCGG--GTTT-SCBC-TTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHH
T ss_pred CCCEEECCEEEECcCCCCChHH--HHhh-hhhc-CCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHH
Confidence 3467999999999999999987 5666 8887 789999999 9999999999999984 1 2468999999
Q ss_pred HHHHHHHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhcc
Q psy3825 81 AGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYH 160 (332)
Q Consensus 81 qG~vAA~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 160 (332)
||++||.||+|......++..+|++.|++|++++||+++++|++. |.+ +.+.. +.. ..+
T Consensus 305 qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~-g~~-~~~~~--~~~-----~~~------------ 363 (447)
T 1nhp_A 305 QGRFAVKNLEEPVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKL-GKE-TKAVT--VVE-----DYL------------ 363 (447)
T ss_dssp HHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHH-TCC-CEEEE--EEE-----ESS------------
T ss_pred HHHHHHHhhcCCCCCCCCccccEEEEECCeeeEEecCCHHHHHHc-CCc-eEEEE--EEc-----CCc------------
Confidence 999999999985433344567899999999999999999999987 532 33221 110 000
Q ss_pred ccCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcc
Q psy3825 161 AYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTE 240 (332)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (332)
+.++|
T Consensus 364 -------------------------------------------------------------------------~~~~~-- 368 (447)
T 1nhp_A 364 -------------------------------------------------------------------------MDFNP-- 368 (447)
T ss_dssp -------------------------------------------------------------------------CTTCT--
T ss_pred -------------------------------------------------------------------------cccCC--
Confidence 00111
Q ss_pred cccccCCCcceEEEEEEecCCCCcEEEEEEeCcc-HHHHHHHHHHHHHCCCCHHHHhcc-cccCCCchHHHHHHHhh
Q psy3825 241 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPN-AGEVIQGYAAAVKCGLTFETLEST-VGIHPTLAEEFTRVTIT 315 (332)
Q Consensus 241 ~~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~~-a~e~i~~~~~ai~~~~t~~~l~~~-~~~~Pt~~e~~~~~~~~ 315 (332)
+...||+|++++ +++++|||+|++|++ |.|+|+.+++||+.|+|+++|.++ +++|||++|.+..+.+.
T Consensus 369 ------~~~~~~~k~~~~-~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~a 438 (447)
T 1nhp_A 369 ------DKQKAWFKLVYD-PETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAFDKPWNIINTA 438 (447)
T ss_dssp ------TCCEEEEEEEEC-TTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTTCCSSCHHHHH
T ss_pred ------CCceEEEEEEEE-CCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCCcccHHHHH
Confidence 346799999999 788999999999998 999999999999999999999997 89999999998887654
No 41
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.97 E-value=2e-31 Score=264.03 Aligned_cols=200 Identities=23% Similarity=0.328 Sum_probs=161.6
Q ss_pred CeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCC---------CCCchhHHHH
Q psy3825 11 KVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHE---------KPELTPVAVQ 80 (332)
Q Consensus 11 dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g---------~~~la~vA~~ 80 (332)
+++++++|.||+|+|++||+++ +++. ++++ ++|+|.||+ |||++|+|||+|||+.. .+++++.|..
T Consensus 274 ~g~~i~~D~Vi~a~G~~p~~~l--l~~~-l~~~-~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~ 349 (490)
T 2bc0_A 274 DKNEYDVDMVILAVGFRPNTTL--GNGK-IDLF-RNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVR 349 (490)
T ss_dssp SSCEEECSEEEECCCEEECCGG--GTTC-SCBC-TTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHH
T ss_pred CCcEEECCEEEECCCCCcChHH--HHhh-hccC-CCCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHH
Confidence 4578999999999999999987 5666 8887 789999999 99999999999999841 1468999999
Q ss_pred HHHHHHHHHhCCCCcccccccceEEEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhcc
Q psy3825 81 AGKLLAARLYGNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYH 160 (332)
Q Consensus 81 qG~vAA~nI~G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 160 (332)
||++||.||+|......++..+++..+++|++++||+||++|++. |. ++.+. .|+.. .+.
T Consensus 350 qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~-g~-~~~~~--~~~~~-----~~~----------- 409 (490)
T 2bc0_A 350 TGIVAAHNACGTDLEGIGVQGSNGISIYGLHMVSTGLTLEKAKRL-GF-DAAVT--EYTDN-----QKP----------- 409 (490)
T ss_dssp HHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHT-TC-CEEEE--EEEEE-----SSC-----------
T ss_pred HHHHHHHHhcCCCCCCCCcccceEEEECCcEeEEeeCCHHHHHHc-CC-ceEEE--EEecC-----Ccc-----------
Confidence 999999999986533344556777777799999999999999986 43 24332 11100 000
Q ss_pred ccCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcc
Q psy3825 161 AYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTE 240 (332)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (332)
.++|
T Consensus 410 --------------------------------------------------------------------------~~~~-- 413 (490)
T 2bc0_A 410 --------------------------------------------------------------------------EFIE-- 413 (490)
T ss_dssp --------------------------------------------------------------------------TTCC--
T ss_pred --------------------------------------------------------------------------cccC--
Confidence 0000
Q ss_pred cccccCCCcceEEEEEEecCCCCcEEEEEEeCc-cHHHHHHHHHHHHHCCCCHHHHhcc-cccCCCchHHHHHHHhhh
Q psy3825 241 FFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGP-NAGEVIQGYAAAVKCGLTFETLEST-VGIHPTLAEEFTRVTITK 316 (332)
Q Consensus 241 ~~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~-~a~e~i~~~~~ai~~~~t~~~l~~~-~~~~Pt~~e~~~~~~~~~ 316 (332)
.+.+.+++|++++ +++++|||+|++|+ +|.|+|+.+++||+.|+|+++|..+ +++|||++|.+..+....
T Consensus 414 -----~~~~~~~~kl~~~-~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~~~ 485 (490)
T 2bc0_A 414 -----HGNFPVTIKIVYD-KDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNKPYNYITMAA 485 (490)
T ss_dssp -----SSCCEEEEEEEEE-TTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHHHHSCCCCCTTTCCTTCHHHHHH
T ss_pred -----CCCceEEEEEEEE-CCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCchhHHHHHHH
Confidence 0245799999999 78999999999999 8999999999999999999999996 999999999998887654
No 42
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.84 E-value=3.5e-21 Score=183.84 Aligned_cols=107 Identities=27% Similarity=0.266 Sum_probs=90.5
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC-CC--CCchhHHHHHH
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH-EK--PELTPVAVQAG 82 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~-g~--~~la~vA~~qG 82 (332)
+.+++++++++|.||+|+|++||+++ ++++|++++ +| |.||+ |||++|+|||+|||+. .+ ..+++.|..||
T Consensus 222 v~~~~g~~i~~d~vv~a~G~~p~~~l--~~~~g~~~~--~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g 296 (384)
T 2v3a_A 222 AHLSDGEVIPCDLVVSAVGLRPRTEL--AFAAGLAVN--RG-IVVDRSLRTSHANIYALGDCAEVDGLNLLYVMPLMACA 296 (384)
T ss_dssp EEETTSCEEEESEEEECSCEEECCHH--HHHTTCCBS--SS-EEECTTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHH
T ss_pred EEECCCCEEECCEEEECcCCCcCHHH--HHHCCCCCC--CC-EEECCCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHH
Confidence 45567788999999999999999986 678899886 57 99999 9999999999999983 12 23577899999
Q ss_pred HHHHHHHhCCCCcccccccceEEEEcC-ceeEEEcCCH
Q psy3825 83 KLLAARLYGNGTTQMDYQNVATTVFTP-LEYGCVGLSE 119 (332)
Q Consensus 83 ~vAA~nI~G~~~~~~~y~~vP~~vftd-Pe~AsVGLTE 119 (332)
+++|+||+|.. ..+++..+|+++|+. +++.++|+++
T Consensus 297 ~~~a~~i~g~~-~~~~~~~~p~~~~~~~~~~~~~g~~~ 333 (384)
T 2v3a_A 297 RALAQTLAGNP-SQVAYGPMPVTVKTPACPLVVSPPPR 333 (384)
T ss_dssp HHHHHHHTTCC-CCCCCCCCCEEECCTTSCEEEECCCT
T ss_pred HHHHHHhcCCC-ccCCCCCcceEEEECCeeEEEecCCC
Confidence 99999999865 567888999999986 5888888765
No 43
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.82 E-value=1.8e-20 Score=181.45 Aligned_cols=163 Identities=16% Similarity=0.263 Sum_probs=129.3
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCC---CCCchhHHHHHHHHHHH
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHE---KPELTPVAVQAGKLLAA 87 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g---~~~la~vA~~qG~vAA~ 87 (332)
++++++|.|++|+|++||+++ ++++|++.+ +| |.||+ |||+.|+|||+|||+.. .+.+++.|..||++||.
T Consensus 215 g~~~~~D~vv~a~G~~p~~~~--~~~~gl~~~--~g-i~vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~ 289 (385)
T 3klj_A 215 GDLIRSSCVITAVGVKPNLDF--IKDTEIASK--RG-ILVNDHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGL 289 (385)
T ss_dssp HHHHHHSEEEECCCEEECCGG--GTTSCCCBS--SS-EEECTTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHH
T ss_pred CeEEecCeEEECcCcccChhh--hhhcCCCcC--CC-EEECCCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHH
Confidence 456889999999999999988 677888875 56 99999 99999999999999841 36789999999999999
Q ss_pred HHhCCCCccccccc-ceE--EEEcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccchhhhhhccccCC
Q psy3825 88 RLYGNGTTQMDYQN-VAT--TVFTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQRCYLKFIYHAYYK 164 (332)
Q Consensus 88 nI~G~~~~~~~y~~-vP~--~vftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 164 (332)
||+|... .+.. +|+ ..+++++++++|+++.++ +.. +. ++
T Consensus 290 ~i~g~~~---~~~~~~~~~~~~~~~~~~~~~G~~~~~~------~~~-~~-------------~~--------------- 331 (385)
T 3klj_A 290 NACGEDA---SYSEIIPSPILKVSGISIISCGDIENNK------PSK-VF-------------RS--------------- 331 (385)
T ss_dssp HHTTCCC---CCCCCCCCCEEEETTEEEEEESCCTTCC------CSE-EE-------------EE---------------
T ss_pred HhcCCCc---CCCCCCCcEEEEeCCCcEEEEcCCCCCC------CeE-EE-------------EE---------------
Confidence 9998653 2433 354 445899999999987531 111 10 00
Q ss_pred CcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhhcccCCCcccccc
Q psy3825 165 PTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIP 244 (332)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (332)
T Consensus 332 -------------------------------------------------------------------------------- 331 (385)
T 3klj_A 332 -------------------------------------------------------------------------------- 331 (385)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHH
Q psy3825 245 QRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTLAEEFTR 311 (332)
Q Consensus 245 ~~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~ 311 (332)
....+|+|++++ +++|+|++++|..+.+. .+..+|+.+.++++| ||++|.|+.
T Consensus 332 --~~~~~~~~~~~~---~~~l~g~~~~g~~~~~~--~~~~~i~~~~~~~~~-------~~~~E~~~~ 384 (385)
T 3klj_A 332 --TQEDKYIVCMLK---ENKIDAAAVIGDVSLGT--KLKKAIDSSKSFDNI-------SSLDAILNN 384 (385)
T ss_dssp --ECSSCEEEEEEE---TTEEEEEEEESCHHHHH--HHHHHHHTTCBCSCC-------SCHHHHHTT
T ss_pred --CCCCeEEEEEEE---CCEEEEEEEECCcHHHH--HHHHHHHcCCCcccc-------cCHHHHHhh
Confidence 124478899886 48999999999987665 688999999999988 999998863
No 44
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.80 E-value=6e-20 Score=176.01 Aligned_cols=107 Identities=20% Similarity=0.277 Sum_probs=88.7
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC--C-CCCchhHHHHH
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH--E-KPELTPVAVQA 81 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~--g-~~~la~vA~~q 81 (332)
++.+++++ +++|.|++|+|++||+++ ++++|++.+ +| |.||+ |||+.|+|||+|||+. + .+++++.|..|
T Consensus 213 ~v~~~~g~-i~~D~vi~a~G~~p~~~l--l~~~gl~~~--~g-i~Vd~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~q 286 (367)
T 1xhc_A 213 GVLTNSGF-IEGKVKICAIGIVPNVDL--ARRSGIHTG--RG-ILIDDNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQ 286 (367)
T ss_dssp EEEETTEE-EECSCEEEECCEEECCHH--HHHTTCCBS--SS-EECCTTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHH
T ss_pred EEEECCCE-EEcCEEEECcCCCcCHHH--HHhCCCCCC--CC-EEECCCcccCCCCEEEeEeeeecCCCCccHHHHHHHH
Confidence 45667777 999999999999999986 678899875 56 99999 9999999999999973 2 24689999999
Q ss_pred HHHHHHHHhCCCCcccccccce--EEEEcCceeEEEcCCHH
Q psy3825 82 GKLLAARLYGNGTTQMDYQNVA--TTVFTPLEYGCVGLSEE 120 (332)
Q Consensus 82 G~vAA~nI~G~~~~~~~y~~vP--~~vftdPe~AsVGLTEe 120 (332)
|++||.||.|.. ..+++ .+| ++.|++|++++||+||+
T Consensus 287 g~~aa~~i~g~~-~~~~~-~~~~~~~~~~~~~~~~vG~~~~ 325 (367)
T 1xhc_A 287 ARVLADILKGEP-RRYNF-KFRSTVFKFGKLQIAIIGNTKG 325 (367)
T ss_dssp HHHHHHHHTTCC-CCCCS-SCCEEEEEETTEEEEEEECCSS
T ss_pred HHHHHHHhcCCC-ccCCC-CCCceEEEECCceEEEECCCCC
Confidence 999999999854 33443 234 35799999999999986
No 45
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.77 E-value=2e-18 Score=168.56 Aligned_cols=171 Identities=20% Similarity=0.121 Sum_probs=130.4
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCC----------Cc
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKP----------EL 74 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~----------~l 74 (332)
.+.+++|+++++|.|++|+|++||+++ ++++|++++ +| |.||+ |||+.|+|||+|||+. .+ ..
T Consensus 228 ~v~~~~G~~i~~D~Vv~a~G~~p~~~l--~~~~gl~~~--~g-i~Vd~~~~ts~~~IyA~GD~~~-~~~~~~g~~~~~~~ 301 (431)
T 1q1r_A 228 AVLCEDGTRLPADLVIAGIGLIPNCEL--ASAAGLQVD--NG-IVINEHMQTSDPLIMAVGDCAR-FHSQLYDRWVRIES 301 (431)
T ss_dssp EEEETTSCEEECSEEEECCCEEECCHH--HHHTTCCBS--SS-EECCTTSBCSSTTEEECGGGEE-EEETTTTEEEECCS
T ss_pred EEEeCCCCEEEcCEEEECCCCCcCcch--hhccCCCCC--CC-EEECCCcccCCCCEEEEEeEEE-EccccCCceEeeCH
Confidence 355667889999999999999999987 677899885 56 99999 9999999999999984 22 25
Q ss_pred hhHHHHHHHHHHHHHhCCCCcccccccceEEE--EcCceeEEEcCCHHHHHHhcCCCCEEEEEeecCCccccccCCCccc
Q psy3825 75 TPVAVQAGKLLAARLYGNGTTQMDYQNVATTV--FTPLEYGCVGLSEEKAEELYGADNLEIYHAYYKPTEFFIPQRNPQR 152 (332)
Q Consensus 75 a~vA~~qG~vAA~nI~G~~~~~~~y~~vP~~v--ftdPe~AsVGLTEe~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r 152 (332)
++.|..||++||.||+|.. .++..+|+++ +.+++++++|+++.. +...+. .+
T Consensus 302 ~~~A~~qg~~aa~~i~g~~---~~~~~~p~~~~~~~~~~~~~~G~~~~~-------~~~~~~-------------~~--- 355 (431)
T 1q1r_A 302 VPNALEQARKIAAILCGKV---PRDEAAPWFWSDQYEIGLKMVGLSEGY-------DRIIVR-------------GS--- 355 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCC---CCCCCCCEEEEEETTEEEEEEECCTTC-------SEEEEE-------------EE---
T ss_pred HHHHHHHHHHHHHHhcCCC---CCCCCCCeEEEEECCceEEEEeCCCCC-------CEEEEE-------------cc---
Confidence 6889999999999999854 2466678653 345889999987621 111110 00
Q ss_pred hhhhhhccccCCCcccccCCCCCccchheeeecccCCCcccccCCCCCcchhhhhhcccCCCcccccCCCCCcchhhhhh
Q psy3825 153 CYLKFIYHAYYKPTEFFIPQRNPQRCYLKVIYHAYYKPTEFFIPQRNPQRCYLKIYHAYYKPTEFFIPQRNPQRCYLKIY 232 (332)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T Consensus 356 -------------------------------------------------------------------------------- 355 (431)
T 1q1r_A 356 -------------------------------------------------------------------------------- 355 (431)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCcccccccCCCcceEEEEEEecCCCCcEEEEEEeCccHHHHHHHHHHHHHCCCCHHHHhcccccCCCc
Q psy3825 233 HAYYKPTEFFIPQRNPQRCYLKVVCERAAPQKVLGMHFIGPNAGEVIQGYAAAVKCGLTFETLESTVGIHPTL 305 (332)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~~ilG~~~ig~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~ 305 (332)
....+|++++ . ++++|+|++++|..+.+.+.....+.+.+++.++|.+..+...++
T Consensus 356 --------------~~~~~~~~~~-~--~~~~l~G~~~~g~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~ 411 (431)
T 1q1r_A 356 --------------LAQPDFSVFY-L--QGDRVLAVDTVNRPVEFNQSKQIITDRLPVEPNLLGDESVPLKEI 411 (431)
T ss_dssp --------------TTTTEEEEEE-E--ETTEEEEEEEESCHHHHHHHHHHHHTTCCCCHHHHTCTTSCHHHH
T ss_pred --------------CCCCeEEEEE-E--eCCEEEEEEEECChHHHHHHHHHHHCCCCCCHHHhhCCCCCHHHH
Confidence 0123565554 3 358999999999999999999999999999999998876554443
No 46
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.76 E-value=1.4e-17 Score=161.21 Aligned_cols=105 Identities=25% Similarity=0.247 Sum_probs=86.6
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCC---------CCch
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEK---------PELT 75 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~---------~~la 75 (332)
.+.+++++++++|.|++|+|++||+++ ++++|++++ +| |.||+ |||+.|+|||+|||+... ..++
T Consensus 217 ~v~~~~g~~i~~D~vi~a~G~~p~~~l--~~~~gl~~~--~g-i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~ 291 (408)
T 2gqw_A 217 VVLLDDGTRIAADMVVVGIGVLANDAL--ARAAGLACD--DG-IFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETW 291 (408)
T ss_dssp EEEETTSCEEECSEEEECSCEEECCHH--HHHHTCCBS--SS-EECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCH
T ss_pred EEEECCCCEEEcCEEEECcCCCccHHH--HHhCCCCCC--CC-EEECCCCccCCCCEEEEEEEEEecCccCCceeeccHH
Confidence 355667889999999999999999987 677889885 57 99999 999999999999998421 1267
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccceEEE--EcCceeEEEcC
Q psy3825 76 PVAVQAGKLLAARLYGNGTTQMDYQNVATTV--FTPLEYGCVGL 117 (332)
Q Consensus 76 ~vA~~qG~vAA~nI~G~~~~~~~y~~vP~~v--ftdPe~AsVGL 117 (332)
+.|..||++||.||.|... .++..+|+++ +.+++++++|+
T Consensus 292 ~~A~~~g~~aa~~i~g~~~--~~~~~~p~~~~~~~~~~~~~~G~ 333 (408)
T 2gqw_A 292 SNAQNQGIAVARHLVDPTA--PGYAELPWYWSDQGALRIQVAGL 333 (408)
T ss_dssp HHHHHHHHHHHHHHHCTTS--CCCCCCCEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCC--CcCCCCCeEEEEECCceEEEECC
Confidence 8999999999999998643 1566778654 45699999998
No 47
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.66 E-value=2.2e-15 Score=145.64 Aligned_cols=106 Identities=20% Similarity=0.173 Sum_probs=86.9
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCC--------CCchh
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEK--------PELTP 76 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~--------~~la~ 76 (332)
++.+++++++++|.||+|+|++||+++ ++++|++++ +| |.||+ +||+.|+|||+|||+... ...++
T Consensus 219 ~v~~~dg~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~--~g-i~vd~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~ 293 (410)
T 3ef6_A 219 QVMASDGRSFVADSALICVGAEPADQL--ARQAGLACD--RG-VIVDHCGATLAKGVFAVGDVASWPLRAGGRRSLETYM 293 (410)
T ss_dssp EEEETTSCEEECSEEEECSCEEECCHH--HHHTTCCBS--SS-EECCTTSBCSSTTEEECGGGEEEEBTTSSEECCCCHH
T ss_pred EEEECCCCEEEcCEEEEeeCCeecHHH--HHhCCCccC--Ce-EEEccCeeECCCCEEEEEcceeccCCCCCeeeechHH
Confidence 466778889999999999999999987 678899885 56 99999 999999999999998411 23478
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccceEE--EEcCceeEEEcCCH
Q psy3825 77 VAVQAGKLLAARLYGNGTTQMDYQNVATT--VFTPLEYGCVGLSE 119 (332)
Q Consensus 77 vA~~qG~vAA~nI~G~~~~~~~y~~vP~~--vftdPe~AsVGLTE 119 (332)
.|..||++||.||+|.. ..|..+|+. .+.+..+..+|+++
T Consensus 294 ~A~~qg~~aa~~i~g~~---~~~~~~p~~~~~~~~~~~~~~G~~~ 335 (410)
T 3ef6_A 294 NAQRQAAAVAAAILGKN---VSAPQLPVSWTEIAGHRMQMAGDIE 335 (410)
T ss_dssp HHHHHHHHHHHHHTTCC---CCCCBCCEEEEEETTEEEEEESCSS
T ss_pred HHHHHHHHHHHHHcCCC---CCCCCCCeeEEEECCceEEEEcCCC
Confidence 99999999999999864 356667754 35678888898765
No 48
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.63 E-value=4.8e-15 Score=142.78 Aligned_cols=106 Identities=25% Similarity=0.286 Sum_probs=87.3
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCC----------Cc
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKP----------EL 74 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~----------~l 74 (332)
++.+++++++++|.||+|+|++||+++ ++++|++.+ +| |.||+ +||++|+|||+|||+.... ..
T Consensus 229 ~v~l~dG~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~--~g-i~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~ 303 (415)
T 3lxd_A 229 GVRMQDGSVIPADIVIVGIGIVPCVGA--LISAGASGG--NG-VDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLES 303 (415)
T ss_dssp EEEESSSCEEECSEEEECSCCEESCHH--HHHTTCCCS--SS-EECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCS
T ss_pred EEEeCCCCEEEcCEEEECCCCccChHH--HHhCCCCcC--CC-EEECCCCCcCCCCEEEEEeeeeecCcccCCcceeech
Confidence 466778889999999999999999987 677899875 56 99999 9999999999999984211 13
Q ss_pred hhHHHHHHHHHHHHHhCCCCcccccccceE--EEEcCceeEEEcCCH
Q psy3825 75 TPVAVQAGKLLAARLYGNGTTQMDYQNVAT--TVFTPLEYGCVGLSE 119 (332)
Q Consensus 75 a~vA~~qG~vAA~nI~G~~~~~~~y~~vP~--~vftdPe~AsVGLTE 119 (332)
++.|..||++||+||+|.. ..|..+|+ +.+.+..+..+|+++
T Consensus 304 ~~~A~~qg~~aa~~i~g~~---~~~~~~p~~~~~~~~~~~~~~G~~~ 347 (415)
T 3lxd_A 304 VQNANDMATAAAKDICGAP---VPYKATPWFWSNQYDLKLQTVGLST 347 (415)
T ss_dssp HHHHHHHHHHHHHHHTTCC---CCCCCCCEEEEEETTEEEEEEECCT
T ss_pred HHHHHHHHHHHHHHhcCCC---CCCCCCCeeEeeeCCcEEEEEeCCC
Confidence 5899999999999999864 24666775 456688999999874
No 49
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.61 E-value=6.1e-15 Score=141.83 Aligned_cols=106 Identities=24% Similarity=0.239 Sum_probs=87.5
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCC---------CCch
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEK---------PELT 75 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~---------~~la 75 (332)
++.+++|+++++|.||+|+|++||+++ ++++|++++ +| |.||+ +||+.|+|||+|||+... ...+
T Consensus 219 ~V~~~dG~~i~aD~Vv~a~G~~p~~~l--~~~~gl~~~--~G-i~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~ 293 (404)
T 3fg2_P 219 GVVLSDGNTLPCDLVVVGVGVIPNVEI--AAAAGLPTA--AG-IIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESV 293 (404)
T ss_dssp EEEETTSCEEECSEEEECCCEEECCHH--HHHTTCCBS--SS-EEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSH
T ss_pred EEEeCCCCEEEcCEEEECcCCccCHHH--HHhCCCCCC--CC-EEECCCcccCCCCEEEeecceeecCccCCceeeehHH
Confidence 466778889999999999999999987 677899885 56 99999 999999999999998411 1247
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccceE--EEEcCceeEEEcCCH
Q psy3825 76 PVAVQAGKLLAARLYGNGTTQMDYQNVAT--TVFTPLEYGCVGLSE 119 (332)
Q Consensus 76 ~vA~~qG~vAA~nI~G~~~~~~~y~~vP~--~vftdPe~AsVGLTE 119 (332)
+.|..||++||.||+|.. ..|..+|+ +.+.+..+..+|++.
T Consensus 294 ~~A~~qg~~aa~~i~g~~---~~~~~~p~~~~~~~~~~~~~~G~~~ 336 (404)
T 3fg2_P 294 QNATDQARCVAARLTGDA---KPYDGYPWFWSDQGDDKLQIVGLTA 336 (404)
T ss_dssp HHHHHHHHHHHHHTTTCC---CCCCCCCEEEEEETTEEEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCC---CCCCCCCceEeEECCcEEEEEeCCC
Confidence 899999999999999864 34666664 556788999999874
No 50
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.50 E-value=2.9e-14 Score=129.72 Aligned_cols=77 Identities=22% Similarity=0.202 Sum_probs=65.2
Q ss_pred cCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHH
Q psy3825 9 MDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAA 87 (332)
Q Consensus 9 ~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~ 87 (332)
.++++++++|.|++|+|++||+++|+ .+++++ ++|.| ||+ ||||+|||||+|||+.+...++..|+.||+.||.
T Consensus 231 ~~~~~~i~~d~vi~a~G~~pn~~~l~---~~~~~~-~~G~i-v~~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~ 305 (314)
T 4a5l_A 231 SGEYKVVPVAGLFYAIGHSPNSKFLG---GQVKTA-DDGYI-LTEGPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAAL 305 (314)
T ss_dssp TCCEEEEECSEEEECSCEEESCGGGT---TSSCBC-TTSCB-CCBTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHH
T ss_pred cccceeeccccceEecccccChhHhc---ccceEc-CCeeE-eCCCCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHH
Confidence 45678999999999999999999864 347777 77854 899 9999999999999994334588999999999999
Q ss_pred HHh
Q psy3825 88 RLY 90 (332)
Q Consensus 88 nI~ 90 (332)
++.
T Consensus 306 ~~~ 308 (314)
T 4a5l_A 306 SCE 308 (314)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 51
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.48 E-value=5.2e-14 Score=129.09 Aligned_cols=78 Identities=23% Similarity=0.300 Sum_probs=68.7
Q ss_pred cCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHH
Q psy3825 9 MDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAA 87 (332)
Q Consensus 9 ~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~ 87 (332)
.+++.++++|.|++++|++||+.+ ++.+|+.. ++|+|.||+ ||||+|||||+|||+...+++++.|+.||++||.
T Consensus 224 ~~~~~~~~~d~v~~~~g~~~~~~~--~~~~g~~~--~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~ 299 (312)
T 4gcm_A 224 DGSEETHEADGVFIYIGMKPLTAP--FKDLGITN--DVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQ 299 (312)
T ss_dssp TCCEEEEECSEEEECSCEEESCGG--GGGGTCBC--TTSCBCCCTTSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHH
T ss_pred CCceeEEeeeeEEeecCCCcCchh--HHhcceec--CCCeEeeCCCCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHH
Confidence 456678999999999999999987 56777754 589999999 9999999999999984456799999999999999
Q ss_pred HHh
Q psy3825 88 RLY 90 (332)
Q Consensus 88 nI~ 90 (332)
+|.
T Consensus 300 ~i~ 302 (312)
T 4gcm_A 300 SAA 302 (312)
T ss_dssp HHH
T ss_pred HHH
Confidence 986
No 52
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.46 E-value=3.8e-14 Score=130.33 Aligned_cols=82 Identities=12% Similarity=0.133 Sum_probs=71.1
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHH
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKL 84 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~v 84 (332)
.+.+++++++++|.+++++|.+|++.+ ++++|++++ ++|+|.||+ ||||+|||||+|||++..+..+..|+.||+.
T Consensus 214 ~v~~~~g~~i~~~~~vi~~g~~~~~~~--~~~~g~~~~-~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~ 290 (304)
T 4fk1_A 214 KVEFHSGLRIERAGGFIVPTFFRPNQF--IEQLGCELQ-SNGTFVIDDFGRTSEKNIYLAGETTTQGPSSLIIAASQGNK 290 (304)
T ss_dssp EEEETTSCEECCCEEEECCEEECSSCH--HHHTTCCCC-TTSSSCSSTTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHH
T ss_pred eeeccccceeeecceeeeeccccCChh--hhhcCeEEC-CCCCEEECcCCccCCCCEEEEeccCCCcchHHHHHHHHHHH
Confidence 466788899999999998888887776 678899998 899999999 9999999999999984345668899999999
Q ss_pred HHHHHh
Q psy3825 85 LAARLY 90 (332)
Q Consensus 85 AA~nI~ 90 (332)
||..|.
T Consensus 291 AA~~i~ 296 (304)
T 4fk1_A 291 AAIAIN 296 (304)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998874
No 53
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.42 E-value=2.7e-13 Score=124.41 Aligned_cols=76 Identities=30% Similarity=0.343 Sum_probs=67.9
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhC
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G 91 (332)
.++++|.|++|+|++||+++ +++.|++++ ++|+|.||+ +||+.|+|||+|||+...+.+++.|..||+.||.+|..
T Consensus 237 ~~i~~D~vi~a~G~~p~~~~--l~~~gl~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 237 KLIETDGVFIYVGLIPQTSF--LKDSGVKLD-ERGYIVVDSRQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp EEECCSEEEECCCEEECCGG--GTTSCCCBC-TTSCBCCCTTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEecCEEEEeeCCccChHH--Hhhcccccc-CCccEeCCCCCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHH
Confidence 47999999999999999988 567789988 789999999 99999999999999943357899999999999999863
No 54
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.42 E-value=3.8e-13 Score=122.46 Aligned_cols=76 Identities=21% Similarity=0.170 Sum_probs=66.9
Q ss_pred eEEEcCEEEEccCccccCcccccccc----CceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHH
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNA----GVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAA 87 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~a----Gl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~ 87 (332)
.++++|.|++|+|++||++++ +.. |++++ ++|+|.||+ +||++|+|||+|||+...+++++.|..||+.||.
T Consensus 226 ~~i~~D~vi~a~G~~p~~~~l--~~~g~~~~l~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~ 302 (311)
T 2q0l_A 226 RELVVPGFFIFVGYDVNNAVL--KQEDNSMLCKCD-EYGSIVVDFSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAAL 302 (311)
T ss_dssp EEEECSEEEECSCEEECCGGG--BCTTSCBSSCBC-TTSCBCCCTTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHH
T ss_pred EEEecCEEEEEecCccChhhh--hcccccceeEec-cCCCEEeCCccccCCCCeEEcccccCcchHHHHHHHHhHHHHHH
Confidence 479999999999999999884 455 48888 789999999 9999999999999994347899999999999999
Q ss_pred HHhC
Q psy3825 88 RLYG 91 (332)
Q Consensus 88 nI~G 91 (332)
||..
T Consensus 303 ~i~~ 306 (311)
T 2q0l_A 303 SVIS 306 (311)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9863
No 55
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.40 E-value=3.4e-13 Score=121.81 Aligned_cols=77 Identities=18% Similarity=0.219 Sum_probs=68.4
Q ss_pred eEEEcCEEEEccCccccCccccc-cccC-ceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHH
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAV-SNAG-VKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARL 89 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~L-e~aG-l~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI 89 (332)
.++++|.|++|+|++|+++++.. +.+| ++++ ++|+|.||+ +||++|+|||+|||+...+..+..|+.||+.||.+|
T Consensus 229 ~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~-~~g~i~vd~~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i 307 (315)
T 3r9u_A 229 RDLNVPGIFTFVGLNVRNEILKQDDSKFLCNME-EGGQVSVDLKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSA 307 (315)
T ss_dssp EEECCSCEEECSCEEECCGGGBCTTSCBSSCBC-TTSCBCCCTTCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHH
T ss_pred EEeecCeEEEEEcCCCCchhhhcccccceeeec-CCCcEEeCCCcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHH
Confidence 48999999999999999998654 3466 9888 789999999 999999999999998446788999999999999998
Q ss_pred h
Q psy3825 90 Y 90 (332)
Q Consensus 90 ~ 90 (332)
.
T Consensus 308 ~ 308 (315)
T 3r9u_A 308 M 308 (315)
T ss_dssp H
T ss_pred H
Confidence 6
No 56
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.40 E-value=3.7e-13 Score=128.11 Aligned_cols=108 Identities=16% Similarity=0.099 Sum_probs=82.0
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC--CC-CCCCcEEEecccCCC--CCCchhHHHH
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN--EQ-TNIPNVFAVGDVLHE--KPELTPVAVQ 80 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe--lq-TSvpgIYAiGDva~g--~~~la~vA~~ 80 (332)
.+.+++++++++|.|++++|++|+. + ++++|+. + ++|+|.||+ || |+.|||||+|||+++ .+++++.|.+
T Consensus 236 ~v~~~~g~~i~~D~vi~~~g~~~~~-~--~~~~gl~-~-~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~ 310 (401)
T 3vrd_B 236 TVETSFGETFKAAVINLIPPQRAGK-I--AQSASLT-N-DSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANS 310 (401)
T ss_dssp EEEETTSCEEECSEEEECCCEEECH-H--HHHTTCC-C-TTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHH
T ss_pred EEEcCCCcEEEeeEEEEecCcCCch-h--Hhhcccc-c-cCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHH
Confidence 3667888999999999999999984 4 5678884 5 789999998 55 789999999999853 3578999999
Q ss_pred HHHHHHHHHh----CCCCcccccccceEEEEcCceeEEEcCCH
Q psy3825 81 AGKLLAARLY----GNGTTQMDYQNVATTVFTPLEYGCVGLSE 119 (332)
Q Consensus 81 qG~vAA~nI~----G~~~~~~~y~~vP~~vftdPe~AsVGLTE 119 (332)
||+++|+||. |++..+..|....++ +..+.++.+.+++
T Consensus 311 qa~v~A~ni~~~l~G~~~~~~~y~~~~~~-~~~~~~~~~~~~~ 352 (401)
T 3vrd_B 311 QAKVAAAAVVALLKGEEPGTPSYLNTCYS-ILAPGYGISIAAV 352 (401)
T ss_dssp HHHHHHHHHHHHHHTCCCCCCCEEEEEEE-EEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCcccCCeEEE-EEecCCceEEEEE
Confidence 9999999987 544444445544333 3345666665544
No 57
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.40 E-value=2.8e-13 Score=121.38 Aligned_cols=82 Identities=20% Similarity=0.185 Sum_probs=72.1
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeec-CCC-eeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHH
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIP-ENA-KIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAG 82 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~-e~G-~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG 82 (332)
.+.+.+++++++|.|++++|++|++++ ++++|++++. ++| +|.||+ ++|+.|+|||+|||+ +.+.+++.|..||
T Consensus 204 ~v~~~~g~~~~~D~vi~a~G~~p~~~~--~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~-~~~~~~~~A~~~g 280 (297)
T 3fbs_A 204 DVVLADGRSIALAGLFTQPKLRITVDW--IEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVA-RPAGSVALAVGDG 280 (297)
T ss_dssp EEEETTSCEEEESEEEECCEEECCCSC--HHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGG-CTTCCHHHHHHHH
T ss_pred eEEeCCCCEEEEEEEEEccCcccCchh--HHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecC-CchHHHHHHHHhH
Confidence 466778889999999999999999987 6778887762 246 899999 999999999999999 5688999999999
Q ss_pred HHHHHHHh
Q psy3825 83 KLLAARLY 90 (332)
Q Consensus 83 ~vAA~nI~ 90 (332)
+.||.+|.
T Consensus 281 ~~aa~~i~ 288 (297)
T 3fbs_A 281 AMAGAAAH 288 (297)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999986
No 58
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.37 E-value=9.6e-13 Score=121.04 Aligned_cols=75 Identities=29% Similarity=0.271 Sum_probs=66.3
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhC
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G 91 (332)
+++++|.|++|+|++||+++ +++. ++++ ++|+|.||+ +||+.|+|||+|||+...+++++.|..||+.||.||..
T Consensus 234 ~~i~~D~vi~a~G~~p~~~~--l~~~-~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 234 SELATDGVFIFIGHVPNTAF--VKDT-VSLR-DDGYVDVRDEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp EEEECSEEEECSCEEESCGG--GTTT-SCBC-TTSCBCCBTTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCEEEEccCCCCChHH--Hhhh-cccC-CCccEecCCCCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999988 4555 7787 789999999 99999999999999843368899999999999999974
No 59
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.36 E-value=6.7e-13 Score=120.02 Aligned_cols=76 Identities=28% Similarity=0.365 Sum_probs=68.4
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCC--CCCchhHHHHHHHHHHHH
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHE--KPELTPVAVQAGKLLAAR 88 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g--~~~la~vA~~qG~vAA~n 88 (332)
..++++|.|++++|++|++++ ++..|++++ ++|+|.||+ ++|+.|+|||+|||+.. .+.+++.|..||+.||.+
T Consensus 235 ~~~~~~D~vv~a~G~~p~~~~--~~~~g~~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~ 311 (323)
T 3f8d_A 235 IKELNVNGVFIEIGFDPPTDF--AKSNGIETD-TNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATS 311 (323)
T ss_dssp EEEEECSEEEECCCEECCHHH--HHHTTCCBC-TTSSBCCCTTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEEEECCCCChhH--HhhcCeeec-CCCcEecCCCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHH
Confidence 348999999999999999987 678899998 789999999 99999999999999932 378899999999999999
Q ss_pred Hh
Q psy3825 89 LY 90 (332)
Q Consensus 89 I~ 90 (332)
|.
T Consensus 312 i~ 313 (323)
T 3f8d_A 312 AY 313 (323)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 60
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.36 E-value=1.4e-12 Score=118.74 Aligned_cols=76 Identities=18% Similarity=0.177 Sum_probs=68.4
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC--CCCCchhHHHHHHHHHHHH
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH--EKPELTPVAVQAGKLLAAR 88 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~--g~~~la~vA~~qG~vAA~n 88 (332)
++++++|.|++|+|++|++++ ++..|++++ +|+|.||+ +||+.|+|||+|||+. +.+.+++.|..||+.||.+
T Consensus 234 ~~~~~~D~vv~a~G~~p~~~~--~~~~~~~~~--~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~ 309 (332)
T 3lzw_A 234 KEILEIDDLIVNYGFVSSLGP--IKNWGLDIE--KNSIVVKSTMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNN 309 (332)
T ss_dssp EEEEECSEEEECCCEECCCGG--GGGSSCCEE--TTEEECCTTSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHH
T ss_pred eEEEECCEEEEeeccCCCchH--HhhcCcccc--CCeEEeCCCCceecCCEEEccceecCCCCcceEeeehhhHHHHHHH
Confidence 678999999999999999987 678888885 78999999 9999999999999984 3578899999999999999
Q ss_pred HhC
Q psy3825 89 LYG 91 (332)
Q Consensus 89 I~G 91 (332)
|..
T Consensus 310 i~~ 312 (332)
T 3lzw_A 310 AKA 312 (332)
T ss_dssp HHH
T ss_pred HHH
Confidence 973
No 61
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.34 E-value=2e-12 Score=117.70 Aligned_cols=75 Identities=20% Similarity=0.177 Sum_probs=65.1
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhC
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G 91 (332)
.++++|.|++|+|++||+++| ++ .++++ ++|+|.||+ +||+.|+|||+|||+......+..|+.||+.||.+|..
T Consensus 227 ~~i~~D~vi~a~G~~p~~~~l--~~-~l~~~-~~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 227 HNIELAGIFVQIGLLPNTNWL--EG-AVERN-RMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp EEEECSEEEECSCEEESCGGG--TT-TSCBC-TTSCBCCCTTCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCEEEEeeCCccCchHH--hc-ccccc-CCCcEEcCCCCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHH
Confidence 579999999999999999874 44 37787 789999999 99999999999999943346789999999999999863
No 62
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.34 E-value=1.1e-12 Score=111.50 Aligned_cols=77 Identities=21% Similarity=0.274 Sum_probs=65.8
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCC-chhHHHHHHHH
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPE-LTPVAVQAGKL 84 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~-la~vA~~qG~v 84 (332)
+.++++ ++++|.||+|+|.+|+. ++..|++++ +|.|.||+ +||+.|+|||+|||+ ..+. +++.|..||+.
T Consensus 90 v~~~~g-~i~ad~vI~A~G~~~~~----~~~~g~~~~--~g~i~vd~~~~t~~~~i~a~GD~~-~~~~~~~~~A~~~g~~ 161 (180)
T 2ywl_A 90 VETEEG-VEKAERLLLCTHKDPTL----PSLLGLTRR--GAYIDTDEGGRTSYPRVYAAGVAR-GKVPGHAIISAGDGAY 161 (180)
T ss_dssp EECSSC-EEEEEEEEECCTTCCHH----HHHHTCCEE--TTEECCCTTCBCSSTTEEECGGGG-TCCSCCHHHHHHHHHH
T ss_pred EEECCC-EEEECEEEECCCCCCCc----cccCCCCcc--CceEEeCCCCCcCCCCEEEeeccc-CcchhhHHHHHHhHHH
Confidence 445566 89999999999999964 345678886 78999999 999999999999999 4544 89999999999
Q ss_pred HHHHHhC
Q psy3825 85 LAARLYG 91 (332)
Q Consensus 85 AA~nI~G 91 (332)
||.||.+
T Consensus 162 aa~~i~~ 168 (180)
T 2ywl_A 162 VAVHLVS 168 (180)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999985
No 63
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.32 E-value=2.9e-12 Score=117.76 Aligned_cols=75 Identities=25% Similarity=0.335 Sum_probs=67.1
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC--CCCCchhHHHHHHHHHHHHH
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH--EKPELTPVAVQAGKLLAARL 89 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~--g~~~la~vA~~qG~vAA~nI 89 (332)
+++++|.|++|+|++||+++ ++++|++++ +|+|.||+ +||++|+|||+|||+. +.+.+++.|..||+.+|.||
T Consensus 237 ~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~--~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i 312 (335)
T 2zbw_A 237 LALEVDAVLILAGYITKLGP--LANWGLALE--KNKIKVDTTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHA 312 (335)
T ss_dssp EEEECSEEEECCCEEEECGG--GGGSCCCEE--TTEEECCTTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHH
T ss_pred EEEecCEEEEeecCCCCchH--hhhcceecc--CCeeeeCCCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHH
Confidence 78999999999999999987 577889886 68899999 9999999999999984 24678999999999999999
Q ss_pred hC
Q psy3825 90 YG 91 (332)
Q Consensus 90 ~G 91 (332)
.+
T Consensus 313 ~~ 314 (335)
T 2zbw_A 313 AA 314 (335)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 64
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.32 E-value=3e-12 Score=116.78 Aligned_cols=75 Identities=23% Similarity=0.247 Sum_probs=66.4
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeec-CC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHH
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDS-DN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARL 89 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~V-De-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI 89 (332)
++++++|.|++|+|++|+++++ +. +++++ ++|+|.| |+ ++|+.|+|||+|||+...+..+..|+.+|+.||.+|
T Consensus 255 ~~~i~~D~vi~a~G~~p~~~~~--~~-~l~~~-~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 330 (338)
T 3itj_A 255 ETDLPVSGLFYAIGHTPATKIV--AG-QVDTD-EAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDA 330 (338)
T ss_dssp EEEEECSEEEECSCEEECCGGG--BT-TBCBC-TTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEeCEEEEEeCCCCChhHh--hC-ceEec-CCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHH
Confidence 6789999999999999999874 33 89998 7999996 67 999999999999999545678999999999999998
Q ss_pred h
Q psy3825 90 Y 90 (332)
Q Consensus 90 ~ 90 (332)
.
T Consensus 331 ~ 331 (338)
T 3itj_A 331 E 331 (338)
T ss_dssp H
T ss_pred H
Confidence 6
No 65
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.30 E-value=4.7e-12 Score=115.73 Aligned_cols=82 Identities=13% Similarity=0.206 Sum_probs=70.9
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC---CCCCCCcEEEec--ccCCCCCCchhHHHH
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN---EQTNIPNVFAVG--DVLHEKPELTPVAVQ 80 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe---lqTSvpgIYAiG--Dva~g~~~la~vA~~ 80 (332)
++.+++++++++|.|++|+|++||+++ ++++|+. + ++|+|.||+ ++|+.|+|||+| ||+...+..+..|..
T Consensus 263 ~v~~~~g~~i~~D~vi~a~G~~p~~~~--l~~~gl~-~-~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~ 338 (357)
T 4a9w_A 263 GMQWADGTERAFDAVIWCTGFRPALSH--LKGLDLV-T-PQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTR 338 (357)
T ss_dssp EEECTTSCEEECSEEEECCCBCCCCGG--GTTTTCB-C-TTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHH
T ss_pred eeEECCCCEecCCEEEECCCcCCCCcc--cCccccc-C-CCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHH
Confidence 467778899999999999999999998 6778888 6 789999998 479999999999 666335677888999
Q ss_pred HHHHHHHHHhC
Q psy3825 81 AGKLLAARLYG 91 (332)
Q Consensus 81 qG~vAA~nI~G 91 (332)
||+.+|.+|..
T Consensus 339 ~g~~~a~~i~~ 349 (357)
T 4a9w_A 339 YAREAVRQVTA 349 (357)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999974
No 66
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.29 E-value=3.7e-12 Score=126.57 Aligned_cols=91 Identities=18% Similarity=0.231 Sum_probs=72.8
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceeecC-CCeeecCC-CCCCCCcEEEecccCCC------C--CCchh
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPE-NAKIDSDN-EQTNIPNVFAVGDVLHE------K--PELTP 76 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e-~G~I~VDe-lqTSvpgIYAiGDva~g------~--~~la~ 76 (332)
+.+++|+++++|.||+|+|++||+++ ++++|++++ + +|+|.||+ ||| .|+|||+|||+.. . ...+.
T Consensus 261 v~l~dG~~i~aD~Vv~a~G~~pn~~l--~~~~gl~~~-~~~ggi~Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~ 336 (493)
T 1m6i_A 261 IKLKDGRKVETDHIVAAVGLEPNVEL--AKTGGLEID-SDFGGFRVNAELQA-RSNIWVAGDAACFYDIKLGRRRVEHHD 336 (493)
T ss_dssp EEETTSCEEEESEEEECCCEEECCTT--HHHHTCCBC-TTTCSEECCTTCEE-ETTEEECGGGEEEEETTTEEECCCCHH
T ss_pred EEECCCCEEECCEEEECCCCCccHHH--HHHcCCccc-cCCCcEEECCCccc-CCCeeEeeeeEeccCcccCccccchHH
Confidence 55667889999999999999999987 577889887 4 57899999 998 5999999999841 1 12355
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccceE
Q psy3825 77 VAVQAGKLLAARLYGNGTTQMDYQNVAT 104 (332)
Q Consensus 77 vA~~qG~vAA~nI~G~~~~~~~y~~vP~ 104 (332)
.|..||++||.||+|.. . .|...|+
T Consensus 337 ~A~~qg~~aa~ni~g~~-~--~~~~~~~ 361 (493)
T 1m6i_A 337 HAVVSGRLAGENMTGAA-K--PYWHQSM 361 (493)
T ss_dssp HHHHHHHHHHHHHTSCC-C--CCCCCCE
T ss_pred HHHHHHHHHHHHhcCCC-C--CcCCcCc
Confidence 89999999999999854 2 3444554
No 67
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.29 E-value=5.5e-13 Score=144.19 Aligned_cols=107 Identities=20% Similarity=0.084 Sum_probs=84.4
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC--CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN--EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe--lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
.++++|.||+|+|++|+...|..+..|++++ ++|+|.||+ +||++|+|||+|||+ +.+.+++.|+.||+.||.+|.
T Consensus 427 ~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~-~~G~I~vd~~~~~Ts~~~VfA~GD~~-~~~~~~~~A~~~G~~aA~~i~ 504 (1025)
T 1gte_A 427 VHLKADVVISAFGSVLRDPKVKEALSPIKFN-RWDLPEVDPETMQTSEPWVFAGGDIV-GMANTTVESVNDGKQASWYIH 504 (1025)
T ss_dssp EEEECSEEEECSCEECCCHHHHHHTTTSCBC-TTSSBCCCTTTCBCSSTTEEECSGGG-CSCCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCEEEECCCCCCCchhhhhcccCceEC-CCCCEEECCCCCccCCCCEEEeCCCC-CCchHHHHHHHHHHHHHHHHH
Confidence 5799999999999997654443233589998 789999996 999999999999999 678899999999999999997
Q ss_pred CCCC--cccccccceEEEEcCceeEEEcCCHHH
Q psy3825 91 GNGT--TQMDYQNVATTVFTPLEYGCVGLSEEK 121 (332)
Q Consensus 91 G~~~--~~~~y~~vP~~vftdPe~AsVGLTEe~ 121 (332)
+... ...++..+|.+.|+.|+++.+|++.+.
T Consensus 505 ~~L~~~~~~~~~~~~~~p~~~~ev~~v~ls~~~ 537 (1025)
T 1gte_A 505 KYIQAQYGASVSAKPELPLFYTPVDLVDISVEM 537 (1025)
T ss_dssp HHHHHHTTCCCCSSCCBCCCCCGGGGCCCCEEE
T ss_pred HHHHhccCCCcccCcCccccccccccccceeee
Confidence 4210 113455567777888888888776543
No 68
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.28 E-value=7.5e-12 Score=114.94 Aligned_cols=76 Identities=26% Similarity=0.321 Sum_probs=65.7
Q ss_pred CeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC--CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHH
Q psy3825 11 KVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN--EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAAR 88 (332)
Q Consensus 11 dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe--lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~n 88 (332)
+++++++|.|++|+|++||++++. .+++++ ++|+|.||+ ++|+.|+|||+|||+...+..+..|..+|+.||.+
T Consensus 242 ~~~~i~~D~vi~a~G~~p~~~~~~---~~l~~~-~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~ 317 (333)
T 1vdc_A 242 DVSDLKVSGLFFAIGHEPATKFLD---GGVELD-SDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALD 317 (333)
T ss_dssp CEEEEECSEEEECSCEEESCGGGT---TSSCBC-TTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHH
T ss_pred ceEEEecCEEEEEeCCccchHHhh---cccccc-CCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHH
Confidence 346899999999999999998743 478887 789999998 58999999999999843347899999999999999
Q ss_pred Hh
Q psy3825 89 LY 90 (332)
Q Consensus 89 I~ 90 (332)
|.
T Consensus 318 i~ 319 (333)
T 1vdc_A 318 AE 319 (333)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 69
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.27 E-value=8.1e-12 Score=116.67 Aligned_cols=75 Identities=13% Similarity=0.253 Sum_probs=67.1
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCC--CCCCchhHHHHHHHHHHHHH
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLH--EKPELTPVAVQAGKLLAARL 89 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~--g~~~la~vA~~qG~vAA~nI 89 (332)
+++++|.|++|+|++||+++ ++..|++++ +|+|.||+ +||++|+|||+|||+. +.+.+++.|..||++||.+|
T Consensus 248 ~~i~~D~vi~a~G~~p~~~~--l~~~~~~~~--~g~i~vd~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i 323 (360)
T 3ab1_A 248 WTVEADRLLILIGFKSNLGP--LARWDLELY--ENALVVDSHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHS 323 (360)
T ss_dssp EEEECSEEEECCCBCCSCGG--GGGSSCCEE--TTEEECCTTSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHH
T ss_pred EEEeCCEEEECCCCCCCHHH--HHhhccccc--cCeeeecCCCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHH
Confidence 68999999999999999987 567888886 68899999 9999999999999984 24678999999999999999
Q ss_pred hC
Q psy3825 90 YG 91 (332)
Q Consensus 90 ~G 91 (332)
.+
T Consensus 324 ~~ 325 (360)
T 3ab1_A 324 LS 325 (360)
T ss_dssp HH
T ss_pred Hh
Confidence 74
No 70
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.26 E-value=6.6e-12 Score=116.41 Aligned_cols=75 Identities=20% Similarity=0.216 Sum_probs=65.5
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC--CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHH
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN--EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARL 89 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe--lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI 89 (332)
++++++|.|++|+|++||++++. .+++++ ++|+|.||+ ++|+.|+|||+|||+...+..+..|..+|+.||.+|
T Consensus 236 ~~~i~~D~vi~a~G~~p~~~~~~---~~l~~~-~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i 311 (335)
T 2a87_A 236 ETTLPVTGVFVAIGHEPRSGLVR---EAIDVD-PDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDA 311 (335)
T ss_dssp CEEECCSCEEECSCEEECCTTTB---TTBCBC-TTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHH
T ss_pred eEEeecCEEEEccCCccChhHhh---cccccC-CCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHH
Confidence 36899999999999999998743 478888 789999998 589999999999999433578899999999999998
Q ss_pred h
Q psy3825 90 Y 90 (332)
Q Consensus 90 ~ 90 (332)
.
T Consensus 312 ~ 312 (335)
T 2a87_A 312 E 312 (335)
T ss_dssp H
T ss_pred H
Confidence 6
No 71
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.26 E-value=5e-12 Score=125.42 Aligned_cols=78 Identities=26% Similarity=0.320 Sum_probs=69.0
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC--CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHH
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN--EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARL 89 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe--lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI 89 (332)
+.++++|.||+|+|++||+..+-+++.|++++ ++|+|.||+ +||++|+|||+|||+ ..+.++..|+.||+.||.+|
T Consensus 362 ~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~-~~G~i~vd~~~~~Ts~~~VfA~GD~~-~g~~~v~~A~~~G~~aA~~i 439 (456)
T 2vdc_G 362 EFTVQADLVIKALGFEPEDLPNAFDEPELKVT-RWGTLLVDHRTKMTNMDGVFAAGDIV-RGASLVVWAIRDGRDAAEGI 439 (456)
T ss_dssp EEEEECSEEEECSCEECCCHHHHHHSTTSCBC-TTSSBCCCTTTCBCSSTTEEECGGGG-SSCCSHHHHHHHHHHHHHHH
T ss_pred EEEEECCEEEECCCCCCCcchhhcccCCeeEC-CCCCEEECCCCCcCCCCCEEEecccc-CCchHHHHHHHHHHHHHHHH
Confidence 46899999999999999986312677899998 789999998 899999999999998 56789999999999999998
Q ss_pred hC
Q psy3825 90 YG 91 (332)
Q Consensus 90 ~G 91 (332)
.+
T Consensus 440 ~~ 441 (456)
T 2vdc_G 440 HA 441 (456)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 72
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.23 E-value=1.1e-11 Score=124.34 Aligned_cols=76 Identities=22% Similarity=0.267 Sum_probs=63.4
Q ss_pred eEEEcCEEEEccCccccC--ccccccccCceeecCCCeeecCC-CCC-CCCcEEEecccCC-CCCCchhHHHHHHHHHHH
Q psy3825 13 FEDTYDTVLMAIGRRALT--EETAVSNAGVKVIPENAKIDSDN-EQT-NIPNVFAVGDVLH-EKPELTPVAVQAGKLLAA 87 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt--~~L~Le~aGl~ld~e~G~I~VDe-lqT-SvpgIYAiGDva~-g~~~la~vA~~qG~vAA~ 87 (332)
++|++|.||||+|++||. ..| ....++..+ .+|+|.||+ ||| +.|||||+|||+. +.++++++|.+||+++|+
T Consensus 317 ~~i~ad~viwa~Gv~~~~~~~~l-~~~~~~~~~-~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ 394 (502)
T 4g6h_A 317 ETIPYGTLIWATGNKARPVITDL-FKKIPEQNS-SKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAK 394 (502)
T ss_dssp EEEECSEEEECCCEECCHHHHHH-HHHSGGGTT-CCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHH
T ss_pred eeeccCEEEEccCCcCCHHHHhH-HHhcccccc-CCCceeECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHH
Confidence 479999999999999984 222 234566666 678999999 998 8999999999985 356789999999999999
Q ss_pred HHh
Q psy3825 88 RLY 90 (332)
Q Consensus 88 nI~ 90 (332)
||.
T Consensus 395 ni~ 397 (502)
T 4g6h_A 395 NFD 397 (502)
T ss_dssp HHH
T ss_pred HHH
Confidence 985
No 73
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.22 E-value=2.5e-11 Score=110.62 Aligned_cols=75 Identities=24% Similarity=0.259 Sum_probs=64.9
Q ss_pred CeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-C-----CCCCCcEEEecccCCCCCCchhHHHHHHHH
Q psy3825 11 KVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-E-----QTNIPNVFAVGDVLHEKPELTPVAVQAGKL 84 (332)
Q Consensus 11 dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-l-----qTSvpgIYAiGDva~g~~~la~vA~~qG~v 84 (332)
+++++++|.|++|+|++||++++. .+++++ +|+|.||+ | +|+.|+|||+|||+...+..+..|..+|+.
T Consensus 230 ~~~~i~~D~vv~a~G~~p~~~~~~---~~l~~~--~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~ 304 (320)
T 1trb_A 230 NIESLDVAGLFVAIGHSPNTAIFE---GQLELE--NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCM 304 (320)
T ss_dssp CCEEEECSEEEECSCEEESCGGGT---TTSCEE--TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHH
T ss_pred ceEEEEcCEEEEEeCCCCChHHhc---cccccc--CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHH
Confidence 346899999999999999998743 467776 78999999 8 899999999999994335788999999999
Q ss_pred HHHHHh
Q psy3825 85 LAARLY 90 (332)
Q Consensus 85 AA~nI~ 90 (332)
||.+|.
T Consensus 305 aa~~i~ 310 (320)
T 1trb_A 305 AALDAE 310 (320)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 74
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.17 E-value=4.7e-11 Score=119.61 Aligned_cols=75 Identities=17% Similarity=0.172 Sum_probs=65.5
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
..++++|.|++++|++||+++| ++ +++++ ++|+|.||+ +||++|+|||+|||+......+..|+.+|+.||.+++
T Consensus 437 ~~~i~~D~vi~a~G~~pn~~~l--~~-~l~~~-~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 512 (521)
T 1hyu_A 437 IHSVALAGIFVQIGLLPNTHWL--EG-ALERN-RMGEIIIDAKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 512 (521)
T ss_dssp EEEEECSEEEECCCEEESCGGG--TT-TSCBC-TTSCBCCCTTCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEECcCCCCCchHH--hh-hhccC-CCCcEEeCCCCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHH
Confidence 3579999999999999999884 44 48887 789999999 9999999999999994334678999999999999986
No 75
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.17 E-value=8.1e-11 Score=114.50 Aligned_cols=79 Identities=16% Similarity=0.098 Sum_probs=62.1
Q ss_pred CCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CC-CCCCcEEEecccCC-----------CCCCchh
Q psy3825 10 DKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQ-TNIPNVFAVGDVLH-----------EKPELTP 76 (332)
Q Consensus 10 ~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lq-TSvpgIYAiGDva~-----------g~~~la~ 76 (332)
++++++++|.++|++|.+|+. .+.....++..+ .+|+|.||+ || |+.|||||+|||++ +.+++++
T Consensus 238 g~~~~i~~d~vi~~~G~~~~~-~~~~~~~~l~~~-~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~ 315 (430)
T 3hyw_A 238 GNTHEVPAKFTMFMPSFQGPE-VVASAGDKVANP-ANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGM 315 (430)
T ss_dssp SCEEEEECSEEEEECEEECCH-HHHTTCTTTBCT-TTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHH
T ss_pred CCceEeecceEEEeccCCCch-HHHhcccccccC-CceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHH
Confidence 346789999999999999984 322122234444 567899999 99 89999999999984 1356788
Q ss_pred HHHHHHHHHHHHHh
Q psy3825 77 VAVQAGKLLAARLY 90 (332)
Q Consensus 77 vA~~qG~vAA~nI~ 90 (332)
.|.+||+++|+||.
T Consensus 316 ~A~~qg~~~A~Ni~ 329 (430)
T 3hyw_A 316 MIEQMAMAVAHNIV 329 (430)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999997
No 76
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.12 E-value=7.5e-11 Score=112.87 Aligned_cols=81 Identities=23% Similarity=0.234 Sum_probs=68.6
Q ss_pred eeecCCeeEEEcCEEEEccCccccCcccccccc--CceeecCCCeeecCC-CCC-CCCcEEEecccCC-CCCCchhHHHH
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNA--GVKVIPENAKIDSDN-EQT-NIPNVFAVGDVLH-EKPELTPVAVQ 80 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~a--Gl~ld~e~G~I~VDe-lqT-SvpgIYAiGDva~-g~~~la~vA~~ 80 (332)
++.+++++++++|.|++++|.+|+. + +++. ++ .+ ++|+|.||+ +|| +.|||||+|||+. +.+.+++.|..
T Consensus 248 ~v~~~~g~~~~~D~vi~a~G~~~~~-~--l~~~~~~l-~~-~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~ 322 (409)
T 3h8l_A 248 EIVDEKGNTIPADITILLPPYTGNP-A--LKNSTPDL-VD-DGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVM 322 (409)
T ss_dssp EEEETTSCEEECSEEEEECCEECCH-H--HHTSCGGG-SC-TTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHH
T ss_pred eEEECCCCEEeeeEEEECCCCCccH-H--HHhccccC-cC-CCCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHH
Confidence 4667788899999999999999984 4 4555 44 34 689999999 999 8999999999984 35788999999
Q ss_pred HHHHHHHHHhC
Q psy3825 81 AGKLLAARLYG 91 (332)
Q Consensus 81 qG~vAA~nI~G 91 (332)
||++||+||.+
T Consensus 323 q~~~aa~~i~~ 333 (409)
T 3h8l_A 323 TGRIAAQHLAN 333 (409)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999974
No 77
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.06 E-value=1.7e-10 Score=111.61 Aligned_cols=74 Identities=16% Similarity=0.096 Sum_probs=63.4
Q ss_pred eeEEEcCEEEEccCccccCccccccc--cCceeecCCC-eeecCC-CCC-CCCcEEEecccCCC-----------CCCch
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSN--AGVKVIPENA-KIDSDN-EQT-NIPNVFAVGDVLHE-----------KPELT 75 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~--aGl~ld~e~G-~I~VDe-lqT-SvpgIYAiGDva~g-----------~~~la 75 (332)
++++++|.|++++|++|+.. +.+ .|+ .+ ++| +|.||+ +|| ++|||||+|||+.. .++++
T Consensus 240 g~~i~~D~vv~a~G~~~~~~---l~~~~~gl-~~-~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~ 314 (430)
T 3h28_A 240 THEVPAKFTMFMPSFQGPEV---VASAGDKV-AN-PANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTG 314 (430)
T ss_dssp EEEEECSEEEEECEEECCHH---HHTTCTTT-BC-TTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCH
T ss_pred ceEEeeeEEEECCCCccchh---HhhccccC-cC-CCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchH
Confidence 78999999999999998753 333 477 56 789 999999 998 99999999999842 25688
Q ss_pred hHHHHHHHHHHHHHh
Q psy3825 76 PVAVQAGKLLAARLY 90 (332)
Q Consensus 76 ~vA~~qG~vAA~nI~ 90 (332)
+.|..||++||+||.
T Consensus 315 ~~A~~~g~~aa~ni~ 329 (430)
T 3h28_A 315 MMIEQMAMAVAHNIV 329 (430)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999997
No 78
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.04 E-value=4.3e-10 Score=109.27 Aligned_cols=75 Identities=11% Similarity=0.075 Sum_probs=63.4
Q ss_pred eeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCC-CCCcEEEecccCCC-----------CCCchhHH
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQT-NIPNVFAVGDVLHE-----------KPELTPVA 78 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqT-SvpgIYAiGDva~g-----------~~~la~vA 78 (332)
++++++|.+++++|.+|+... .+..|+ .+ ++|+|.||+ ||| +.|||||+|||+.. .++.++.|
T Consensus 253 ~~~i~~D~vv~~~g~~~~~~~--~~~~gl-~~-~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A 328 (437)
T 3sx6_A 253 EMVLPVKFGMMIPAFKGVPAV--AGVEGL-CN-PGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMI 328 (437)
T ss_dssp EEEEECSEEEEECCEECCHHH--HTSTTT-BC-TTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHH
T ss_pred ceEEEEeEEEEcCCCcCchhh--hccccc-cC-CCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHH
Confidence 678999999999999887543 233567 56 789999999 998 99999999999841 25688999
Q ss_pred HHHHHHHHHHHh
Q psy3825 79 VQAGKLLAARLY 90 (332)
Q Consensus 79 ~~qG~vAA~nI~ 90 (332)
..||+++|+||.
T Consensus 329 ~~qg~~aA~ni~ 340 (437)
T 3sx6_A 329 ESMVSAAVHNIK 340 (437)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999997
No 79
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.99 E-value=3.9e-10 Score=112.03 Aligned_cols=79 Identities=19% Similarity=0.191 Sum_probs=67.3
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCce--eecCCCeee-cCC-CCCCCCcEEEecccCCCCCCchhHHHHHH
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVK--VIPENAKID-SDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAG 82 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~--ld~e~G~I~-VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG 82 (332)
+.+++++++++|.|++|+|++||+++ ++.+|++ ++ ++|+|. ||+ ++ +.|+|||+|||+ + ..++..|..||
T Consensus 292 v~~~~g~~i~aD~Vv~a~G~~p~~~l--~~~~g~~~~~~-~~g~i~~vd~~~~-s~~~vya~GD~~-~-~~~~~~A~~~g 365 (493)
T 1y56_A 292 VIDMNNHEYKVDALIFADGRRPDINP--ITQAGGKLRFR-RGYYSPVLDEYHR-IKDGIYVAGSAV-S-IKPHYANYLEG 365 (493)
T ss_dssp EEETTCCEEECSEEEECCCEEECCHH--HHHTTCCEEEE-TTEEEECCCTTSE-EETTEEECSTTT-C-CCCHHHHHHHH
T ss_pred EEeCCCeEEEeCEEEECCCcCcCchH--HHhcCCCcccc-CCceeeccccccC-cCCCEEEEeccC-C-ccCHHHHHHHH
Confidence 45567789999999999999999987 4566655 46 588887 899 99 999999999998 3 46789999999
Q ss_pred HHHHHHHhC
Q psy3825 83 KLLAARLYG 91 (332)
Q Consensus 83 ~vAA~nI~G 91 (332)
++||.+|.+
T Consensus 366 ~~aa~~i~~ 374 (493)
T 1y56_A 366 KLVGAYILK 374 (493)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999986
No 80
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.93 E-value=5e-10 Score=110.90 Aligned_cols=73 Identities=14% Similarity=0.121 Sum_probs=62.2
Q ss_pred eeEEEcCEEEEccCccccCccccccccCc-eeecCCCeeecCC-CCCC-CCcEEEecccCCCCCCchhHHHHHHHHHHHH
Q psy3825 12 VFEDTYDTVLMAIGRRALTEETAVSNAGV-KVIPENAKIDSDN-EQTN-IPNVFAVGDVLHEKPELTPVAVQAGKLLAAR 88 (332)
Q Consensus 12 g~~I~aD~VLvAtGr~PNt~~L~Le~aGl-~ld~e~G~I~VDe-lqTS-vpgIYAiGDva~g~~~la~vA~~qG~vAA~n 88 (332)
.+++++|.||+|+|++||+ + .|+ +++ ++|+|.||+ +||+ +|+|||+|||+.+...++..|+.+|+.+|.+
T Consensus 317 ~~~i~~d~Vi~a~G~~p~~--l----~gl~~~d-~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~ 389 (460)
T 1cjc_A 317 VEDLPCGLVLSSIGYKSRP--I----DPSVPFD-PKLGVVPNMEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQI 389 (460)
T ss_dssp EEEEECSEEEECCCEECCC--C----CTTSCCB-TTTTBCCEETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEECCCCCCCC--C----CCCcccc-cCCCeeECCCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHH
Confidence 3689999999999999998 2 367 888 778899999 9998 7999999999843334577999999999999
Q ss_pred HhC
Q psy3825 89 LYG 91 (332)
Q Consensus 89 I~G 91 (332)
|.+
T Consensus 390 i~~ 392 (460)
T 1cjc_A 390 LLQ 392 (460)
T ss_dssp HHH
T ss_pred HHH
Confidence 975
No 81
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.90 E-value=2.8e-09 Score=105.15 Aligned_cols=83 Identities=8% Similarity=-0.045 Sum_probs=68.4
Q ss_pred eeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecC---C-CCCCCCcEEEecccCCCCCCchhHHHHH
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSD---N-EQTNIPNVFAVGDVLHEKPELTPVAVQA 81 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VD---e-lqTSvpgIYAiGDva~g~~~la~vA~~q 81 (332)
++.+.+|+++++|.||+|+|++||+++|. +++|++++ ++|+| +| . ++|+.|+|||+||+. . ....+.|..|
T Consensus 254 ~V~~~dG~~i~~D~Vi~atG~~p~~~~l~-~~~gl~~~-~~~~v-~~~~~~~~~t~~p~i~aiGd~~-~-~~~~~~a~~q 328 (464)
T 2xve_A 254 NAYFADGSSEKVDAIILCTGYIHHFPFLN-DDLRLVTN-NRLWP-LNLYKGVVWEDNPKFFYIGMQD-Q-WYSFNMFDAQ 328 (464)
T ss_dssp EEEETTSCEEECSEEEECCCBCCCCTTBC-TTTCCCCC-SSSCC-SSEETTTEESSSTTEEECSCSC-C-SSCHHHHHHH
T ss_pred EEEECCCCEEeCCEEEECCCCCCCCCCcC-cccccccC-CCccc-ccccceEecCCCCCEEEEeCcc-c-ccchHHHHHH
Confidence 46777888999999999999999999865 34788886 55555 44 3 579999999999998 3 4578999999
Q ss_pred HHHHHHHHhCCC
Q psy3825 82 GKLLAARLYGNG 93 (332)
Q Consensus 82 G~vAA~nI~G~~ 93 (332)
|+.+|+++.|..
T Consensus 329 a~~~a~~l~G~~ 340 (464)
T 2xve_A 329 AWYARDVIMGRL 340 (464)
T ss_dssp HHHHHHHHTTSS
T ss_pred HHHHHHHHcCCC
Confidence 999999999853
No 82
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.89 E-value=6.6e-10 Score=103.15 Aligned_cols=82 Identities=20% Similarity=0.137 Sum_probs=62.9
Q ss_pred eecCCeeEEE-cCEEEEccCccccCccccccccCceeecCCCeeecCC--CCCCCCcEEEecccCCCC-C--CchhHHHH
Q psy3825 7 ASMDKVFEDT-YDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN--EQTNIPNVFAVGDVLHEK-P--ELTPVAVQ 80 (332)
Q Consensus 7 v~~~dg~~I~-aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe--lqTSvpgIYAiGDva~g~-~--~la~vA~~ 80 (332)
+.+.+|+++. +|.||+|+|++||++++ .+.+++ + ++|+|.||+ ++|+.|+|||+|||+... . ..+..|.+
T Consensus 250 v~~~~g~~~~~~d~vi~a~G~~~~~~~~--~~~~~~-~-~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~ 325 (369)
T 3d1c_A 250 ISFDSGQSVHTPHEPILATGFDATKNPI--VQQLFV-T-TNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRA 325 (369)
T ss_dssp EEESSSCCEEESSCCEECCCBCGGGSHH--HHHHSC-C-TTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGG
T ss_pred EEecCCeEeccCCceEEeeccCCccchh--hhhhcc-C-CCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhH
Confidence 4455666665 59999999999999874 344566 6 689999998 678999999999998421 1 22456778
Q ss_pred HHHHHHHHHhCC
Q psy3825 81 AGKLLAARLYGN 92 (332)
Q Consensus 81 qG~vAA~nI~G~ 92 (332)
||+.+|++|.|.
T Consensus 326 ~a~~~a~~l~~~ 337 (369)
T 3d1c_A 326 RFAVLAHLLTQR 337 (369)
T ss_dssp GHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc
Confidence 999999999874
No 83
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.85 E-value=1.5e-09 Score=107.48 Aligned_cols=71 Identities=17% Similarity=0.207 Sum_probs=61.5
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CC-CCCCcEEEecccCCCCCC-chhHHHHHHHHHHHHH
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQ-TNIPNVFAVGDVLHEKPE-LTPVAVQAGKLLAARL 89 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lq-TSvpgIYAiGDva~g~~~-la~vA~~qG~vAA~nI 89 (332)
+++++|.||+|+|++|++ + .|+.++ ++|+|.||+ +| |++|+|||+|||+. ++. ++..|..+|..+|.+|
T Consensus 311 ~~i~~d~vi~a~G~~p~~--l----~gl~~d-~~g~i~vn~~~rvt~~pgvya~GD~~~-gp~~~i~~a~~~g~~~a~~i 382 (456)
T 1lqt_A 311 EELPAQLVVRSVGYRGVP--T----PGLPFD-DQSGTIPNVGGRINGSPNEYVVGWIKR-GPTGVIGTNKKDAQDTVDTL 382 (456)
T ss_dssp EEEECSEEEECSCEECCC--C----TTSCCB-TTTTBCCEETTEETTCSSEEECTHHHH-CSCSCTTHHHHHHHHHHHHH
T ss_pred EEEEcCEEEEccccccCC--C----CCCccc-CCCCeeECCCCcCCCCCCEEEEeccCC-CCchhHHHHHHHHHHHHHHH
Confidence 579999999999999998 2 367787 778899999 99 89999999999984 444 5778999999999999
Q ss_pred hC
Q psy3825 90 YG 91 (332)
Q Consensus 90 ~G 91 (332)
++
T Consensus 383 ~~ 384 (456)
T 1lqt_A 383 IK 384 (456)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 84
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.58 E-value=5.7e-08 Score=94.39 Aligned_cols=84 Identities=15% Similarity=0.120 Sum_probs=63.8
Q ss_pred eeecCCeeE-EEcCEEEEccCccccCcccc---ccccCceeecCCCeeecCC-CC---CCCCcEEEecccCCCCCCchhH
Q psy3825 6 GASMDKVFE-DTYDTVLMAIGRRALTEETA---VSNAGVKVIPENAKIDSDN-EQ---TNIPNVFAVGDVLHEKPELTPV 77 (332)
Q Consensus 6 ~v~~~dg~~-I~aD~VLvAtGr~PNt~~L~---Le~aGl~ld~e~G~I~VDe-lq---TSvpgIYAiGDva~g~~~la~v 77 (332)
++.+.+|++ +++|.||+|+|++||+++|+ |+.++..+. .++.+.+|. .+ |+.|+||++||+. .. .+++.
T Consensus 269 ~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~-~~~~~~~~~~~~v~~~~~p~l~~~G~~~-~~-~~~~~ 345 (447)
T 2gv8_A 269 EIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLI-DDGSHVHNVYQHIFYIPDPTLAFVGLAL-HV-VPFPT 345 (447)
T ss_dssp EEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCC-SSSSSCCSEETTTEETTCTTEEESSCCB-SS-CHHHH
T ss_pred EEEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCcee-cCCCcccccccccccCCCCcEEEEeccc-cc-cCchH
Confidence 466677776 78999999999999999833 333322222 235566665 55 7899999999998 33 47899
Q ss_pred HHHHHHHHHHHHhCC
Q psy3825 78 AVQAGKLLAARLYGN 92 (332)
Q Consensus 78 A~~qG~vAA~nI~G~ 92 (332)
|..||+.+|.++.|.
T Consensus 346 a~~qa~~~a~~~~g~ 360 (447)
T 2gv8_A 346 SQAQAAFLARVWSGR 360 (447)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999999984
No 85
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.58 E-value=3.3e-08 Score=106.51 Aligned_cols=68 Identities=16% Similarity=0.155 Sum_probs=57.3
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CC-----CCCCcEEEecccCCCCCCchhHHHHHHHHHH
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQ-----TNIPNVFAVGDVLHEKPELTPVAVQAGKLLA 86 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lq-----TSvpgIYAiGDva~g~~~la~vA~~qG~vAA 86 (332)
+++++|.|++|+|++||++++. . .+|.|.||+ ++ |++|+|||+|||+ +.+.+. .|..||++||
T Consensus 368 ~~i~~D~Vv~a~G~~P~~~l~~--~-------~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a-~~~~l~-~A~~~G~~aA 436 (965)
T 2gag_A 368 QRFEADVLAVAGGFNPVVHLHS--Q-------RQGKLDWDTTIHAFVPADAVANQHLAGAMT-GRLDTA-SALSTGAATG 436 (965)
T ss_dssp EEEECSEEEEECCEEECCHHHH--H-------TTCCEEEETTTTEEEECSCCTTEEECGGGG-TCCSHH-HHHHHHHHHH
T ss_pred EEEEcCEEEECCCcCcChHHHH--h-------CCCcEEEcCcccccccCCCCCCEEEEEecC-CchhHH-HHHHHHHHHH
Confidence 6899999999999999998742 2 245688888 77 8999999999999 666555 8999999999
Q ss_pred HHHhC
Q psy3825 87 ARLYG 91 (332)
Q Consensus 87 ~nI~G 91 (332)
.+|.+
T Consensus 437 ~~i~~ 441 (965)
T 2gag_A 437 AAAAT 441 (965)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99974
No 86
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.38 E-value=1.2e-07 Score=98.88 Aligned_cols=74 Identities=15% Similarity=0.228 Sum_probs=58.5
Q ss_pred EEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhCC
Q psy3825 14 EDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYGN 92 (332)
Q Consensus 14 ~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G~ 92 (332)
++++|.||+|+|++||++++ +++ . ..||+ +||++|+|||+|||+ + +..+..|+.||+.||.+|.+.
T Consensus 632 ~i~aD~Vv~a~G~~p~~~l~--~~l----~-----~~vd~~~~t~~~~VyAiGD~~-~-~~~~~~A~~~G~~aA~~i~~~ 698 (729)
T 1o94_A 632 WIEFDSLVLVTGRHSECTLW--NEL----K-----ARESEWAENDIKGIYLIGDAE-A-PRLIADATFTGHRVAREIEEA 698 (729)
T ss_dssp EEECSEEEEESCEEECCHHH--HHH----H-----HTGGGTGGGTCCEEEECGGGT-S-CCCHHHHHHHHHHHHHTTTSS
T ss_pred eeeCCEEEECCCCCCChHHH--HHH----h-----hhcccccccCCCCeEEEeCcc-c-hhhHHHHHHHHHHHHHHhhhh
Confidence 49999999999999999863 322 2 13688 999999999999998 4 566788999999999999763
Q ss_pred CCcccccccceE
Q psy3825 93 GTTQMDYQNVAT 104 (332)
Q Consensus 93 ~~~~~~y~~vP~ 104 (332)
+.+..+|+
T Consensus 699 ----l~~~~~p~ 706 (729)
T 1o94_A 699 ----NPQIAIPY 706 (729)
T ss_dssp ----CTTSCCCC
T ss_pred ----cccCCCCe
Confidence 33445554
No 87
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.23 E-value=1.4e-06 Score=84.12 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=53.2
Q ss_pred CeeEEEcCEEEEccCcccc--CccccccccCceeecCCCeeecCC-CCCC-----CCcEEEecccCC----CCCCchhHH
Q psy3825 11 KVFEDTYDTVLMAIGRRAL--TEETAVSNAGVKVIPENAKIDSDN-EQTN-----IPNVFAVGDVLH----EKPELTPVA 78 (332)
Q Consensus 11 dg~~I~aD~VLvAtGr~PN--t~~L~Le~aGl~ld~e~G~I~VDe-lqTS-----vpgIYAiGDva~----g~~~la~vA 78 (332)
+..++++|.||+|+|.+|| .++ |+..+. . .|+|.||+ ++++ .|+|||+|||.. ..+.+...|
T Consensus 360 ~~~~~~~D~Vv~AtG~~p~~~~~~--l~~l~~--~--~g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a 433 (463)
T 3s5w_A 360 ELSVETYDAVILATGYERQLHRQL--LEPLAE--Y--LGDHEIGRDYRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLP 433 (463)
T ss_dssp CEEEEEESEEEECCCEECCC-CTT--TGGGGG--G--BC--CCCTTSBCCBCTTBCSEEEESSCCHHHHCTTTTSSTTHH
T ss_pred CeEEEECCEEEEeeCCCCCCccch--hHHHHH--H--hCCcccCcccccccCCCCCCeEEEcCCCcccCCcCccchhHHH
Confidence 3446999999999999999 555 333322 1 17799999 8864 567999999974 245677788
Q ss_pred HHHHHHHHHHHh
Q psy3825 79 VQAGKLLAARLY 90 (332)
Q Consensus 79 ~~qG~vAA~nI~ 90 (332)
.+++++++..+-
T Consensus 434 ~r~~~i~~~~~~ 445 (463)
T 3s5w_A 434 VRAEEISGSLYQ 445 (463)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999988866653
No 88
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.18 E-value=7.6e-07 Score=92.02 Aligned_cols=69 Identities=22% Similarity=0.179 Sum_probs=54.4
Q ss_pred cCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCCCCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHH
Q psy3825 9 MDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAAR 88 (332)
Q Consensus 9 ~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDelqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~n 88 (332)
+++++++++|.||+|+|++||++++ +.++. .+. +|+.|+|||+|||+ + +..+..|+.||+.||.+
T Consensus 605 ~~~~~~i~aD~VV~A~G~~p~~~l~--~~l~~-----~~~------~t~~~~VyaiGD~~-~-~~~~~~A~~~g~~aa~~ 669 (690)
T 3k30_A 605 ASIERELECDAVVMVTARLPREELY--LDLVA-----RRD------AGEIASVRGIGDAW-A-PGTIAAAVWSGRRAAEE 669 (690)
T ss_dssp TCCEEEEECSEEEEESCEEECCHHH--HHHHH-----HHH------HTSCSEEEECGGGT-S-CBCHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCEEEECCCCCCChHHH--HHHhh-----hhc------ccCCCCEEEEeCCC-c-hhhHHHHHHHHHHHHHH
Confidence 3467789999999999999999863 33221 221 58899999999998 4 45566799999999999
Q ss_pred HhCC
Q psy3825 89 LYGN 92 (332)
Q Consensus 89 I~G~ 92 (332)
|.+.
T Consensus 670 i~~~ 673 (690)
T 3k30_A 670 FDAV 673 (690)
T ss_dssp TTCC
T ss_pred HHhh
Confidence 9864
No 89
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.03 E-value=5e-06 Score=74.00 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=29.9
Q ss_pred CCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhC
Q psy3825 56 TNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 56 TSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G 91 (332)
|++|+|||+|||+ . ......|+.||+.+|.+|..
T Consensus 196 t~~p~iya~G~~a-~-~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 196 KRLEGLYAVGLCV-R-EGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp TTSBSEEECGGGT-S-CCCHHHHHHHHHHHHHHHHH
T ss_pred cccccceeeeecc-c-CccHHHHHHHHHHHHHHHHh
Confidence 7999999999999 4 44778899999999999964
No 90
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.73 E-value=7e-06 Score=81.23 Aligned_cols=69 Identities=19% Similarity=0.263 Sum_probs=49.6
Q ss_pred cCEEEEccCccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccCCCC----CCchhHHHHHHHHHHHHH
Q psy3825 17 YDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVLHEK----PELTPVAVQAGKLLAARL 89 (332)
Q Consensus 17 aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva~g~----~~la~vA~~qG~vAA~nI 89 (332)
.|.++++.|+.|+ +.+.+..... . ..|.|.||+ +||++|||||+|||+... ..+++.|..+|.+.+..+
T Consensus 291 ~~~~~~~~G~dp~-~~i~v~p~~~--~-~~GGI~vd~~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a 364 (472)
T 2e5v_A 291 VAKYLARHGHNYK-VKIPIFPAAH--F-VDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINL 364 (472)
T ss_dssp HHHHHHHTTCCTT-SCEECEEEEE--E-ESCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHG
T ss_pred HHHHHHHhCcCcc-cceEeehhhc--e-eCCCeEECCCCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHH
Confidence 3667888999999 7654333222 2 368899999 999999999999998412 267787877755555444
No 91
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.54 E-value=5e-05 Score=78.12 Aligned_cols=59 Identities=17% Similarity=0.138 Sum_probs=46.8
Q ss_pred eEEEcCEEEEccCccccCccccccccCceeecCCCeeecCCCCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHH
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDNEQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARL 89 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDelqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI 89 (332)
+++++|.||+|+|++||++++ +. ++ .. .++|||+|||+...+..+..|++||..+|.||
T Consensus 613 ~~i~~D~Vi~a~G~~p~~~l~--~~----l~-~~-----------g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 613 QVLAVDNVVICAGQEPNRALA--QP----LI-DS-----------GKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp EEECCSEEEECCCEEECCTTH--HH----HH-TT-----------TCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred EEEeCCEEEECCCccccHHHH--HH----HH-hc-----------CCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 689999999999999999873 21 12 12 26899999998534456899999999999875
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.11 E-value=0.00037 Score=69.77 Aligned_cols=82 Identities=16% Similarity=0.148 Sum_probs=58.1
Q ss_pred ceeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecC------C----CC-CCCCcEEEe-cccCC-CC
Q psy3825 5 TGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSD------N----EQ-TNIPNVFAV-GDVLH-EK 71 (332)
Q Consensus 5 ~~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VD------e----lq-TSvpgIYAi-GDva~-g~ 71 (332)
+++.+++ +++++|.||+|||.+++++.+ ...+|. . .+|.+.++ . +. ...||+|++ ||.+. +.
T Consensus 369 ~gv~~~d-~~~~~D~ii~atG~~~~~~~~--~~~~i~-g-~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~ 443 (542)
T 1w4x_A 369 RGVRTSE-REYELDSLVLATGFDALTGAL--FKIDIR-G-VGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSAL 443 (542)
T ss_dssp SEEEESS-CEEECSEEEECCCCCCTTHHH--HTSEEE-C-GGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGG
T ss_pred CeEEeCC-eEEecCEEEEcCCccccccCc--CceeeE-C-CCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCccc
Confidence 4677778 899999999999999998763 333332 1 34544332 1 22 257999998 99852 34
Q ss_pred CCchhHHHHHHHHHHHHHhC
Q psy3825 72 PELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 72 ~~la~vA~~qG~vAA~nI~G 91 (332)
...+..|..|++.++++|..
T Consensus 444 ~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 444 SNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp SCHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHH
Confidence 55678899999999999863
No 93
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.44 E-value=0.0033 Score=63.37 Aligned_cols=80 Identities=16% Similarity=0.209 Sum_probs=55.8
Q ss_pred ceeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecC----------C-CC-CCCCcEEEe-cccCCCC
Q psy3825 5 TGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSD----------N-EQ-TNIPNVFAV-GDVLHEK 71 (332)
Q Consensus 5 ~~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VD----------e-lq-TSvpgIYAi-GDva~g~ 71 (332)
+++.+++|+++++|+||+|||.++++.++ .. +.+. .++.+.++ . +. .+.||+|++ |..+ ..
T Consensus 361 ~gv~~~dG~~~~~DvIV~ATGf~~~~~~~--~~--~~i~-g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~-~~ 434 (540)
T 3gwf_A 361 KGVVTEDGVLHELDVLVFATGFDAVDGNY--RR--IEIR-GRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNG-PF 434 (540)
T ss_dssp SEEEETTCCEEECSEEEECCCBSCSSHHH--HT--SEEE-CGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSC-BC
T ss_pred CeEEcCCCCEEECCEEEECCccCccccCc--Cc--ceEE-CCCCcCHHHhhccChhhccccccCCCCceEEEecCCC-CC
Confidence 46788899999999999999999998553 22 2232 22223333 2 22 268999999 8765 34
Q ss_pred CCchhHHHHHHHHHHHHHh
Q psy3825 72 PELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 72 ~~la~vA~~qG~vAA~nI~ 90 (332)
......+..|++.+++.|.
T Consensus 435 ~s~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 435 TNLPPSIETQVEWISDTIG 453 (540)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHH
Confidence 4566788889998888774
No 94
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.03 E-value=0.0018 Score=61.45 Aligned_cols=60 Identities=12% Similarity=-0.045 Sum_probs=47.8
Q ss_pred eecCCeeEEEcCEEEEccC--------ccccCccccccccCceeecCCCeeecCC-CCCCCCcEEEecccC
Q psy3825 7 ASMDKVFEDTYDTVLMAIG--------RRALTEETAVSNAGVKVIPENAKIDSDN-EQTNIPNVFAVGDVL 68 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtG--------r~PNt~~L~Le~aGl~ld~e~G~I~VDe-lqTSvpgIYAiGDva 68 (332)
+.+.+++++++|.||+|+| +.|++..+.++..+.... ...++|+. ++|+.++||+.||+.
T Consensus 238 v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~--~~~~kv~~~~~~~~~~i~~~~d~~ 306 (431)
T 3k7m_X 238 VTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHG--GQGLKILIHVRGAEAGIECVGDGI 306 (431)
T ss_dssp EEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCC--CCEEEEEEEEESCCTTEEEEBSSS
T ss_pred EEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCC--cceEEEEEEECCCCcCceEcCCCC
Confidence 4456677899999999999 999998766665544332 34599999 999999999999986
No 95
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=95.64 E-value=0.0036 Score=57.18 Aligned_cols=78 Identities=15% Similarity=0.125 Sum_probs=50.4
Q ss_pred eEEEcCEEEEccCccccCccccccc---cC--ceeecCCCeeecC--------CCCCCCCcEEEecccCC---CCC---C
Q psy3825 13 FEDTYDTVLMAIGRRALTEETAVSN---AG--VKVIPENAKIDSD--------NEQTNIPNVFAVGDVLH---EKP---E 73 (332)
Q Consensus 13 ~~I~aD~VLvAtGr~PNt~~L~Le~---aG--l~ld~e~G~I~VD--------elqTSvpgIYAiGDva~---g~~---~ 73 (332)
.++++|.||+|+|..++...+.... .+ +.+.+.+| +.+| ..+|+.|+||++||++. +.+ +
T Consensus 176 ~~i~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g-~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp 254 (284)
T 1rp0_A 176 NVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKA-LDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGP 254 (284)
T ss_dssp EEEEEEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEE-ECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCS
T ss_pred EEEECCEEEECCCCchHHHHHHHHHhhhccCCCCcCCcCC-chhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcCh
Confidence 6799999999999888764321111 11 11111222 4333 24567899999999873 222 2
Q ss_pred chhHHHHHHHHHHHHHhC
Q psy3825 74 LTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 74 la~vA~~qG~vAA~nI~G 91 (332)
....|..+|+.+|.++..
T Consensus 255 ~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 255 TFGAMMISGQKAGQLALK 272 (284)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHH
Confidence 355778999999999874
No 96
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=95.52 E-value=0.0019 Score=59.70 Aligned_cols=44 Identities=9% Similarity=0.080 Sum_probs=32.9
Q ss_pred CeeecCC-CCCCCCcEEEecccCC---CCC---CchhHHHHHHHHHHHHHh
Q psy3825 47 AKIDSDN-EQTNIPNVFAVGDVLH---EKP---ELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 47 G~I~VDe-lqTSvpgIYAiGDva~---g~~---~la~vA~~qG~vAA~nI~ 90 (332)
+.|.+|+ ++|++|||||+||++. +.+ +....++..|+.||+.|.
T Consensus 271 ~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 271 HDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQIL 321 (326)
T ss_dssp HHHHHHCEECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHH
T ss_pred CeEEECCCeEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHH
Confidence 5588888 9999999999999874 111 122345678999999885
No 97
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.28 E-value=0.029 Score=56.61 Aligned_cols=80 Identities=11% Similarity=0.115 Sum_probs=54.1
Q ss_pred ceeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-C-----------CCCCCcEEEecccCC--C
Q psy3825 5 TGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-E-----------QTNIPNVFAVGDVLH--E 70 (332)
Q Consensus 5 ~~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-l-----------qTSvpgIYAiGDva~--g 70 (332)
+++.+++| ++++|.||+|||..+++..+ . ++++. .++.+.+++ . -.+.||+|.+.--.+ +
T Consensus 369 ~gv~~~dG-~~~~D~IV~ATGf~~~~~~~--~--~~~i~-g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~ 442 (545)
T 3uox_A 369 EGIKTADA-AYDLDVIIYATGFDAVTGSL--D--RIDIR-GKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGST 442 (545)
T ss_dssp TEEEESSC-EEECSEEEECCCCBSSSCSC--T--TSEEE-CGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGG
T ss_pred CeEEeCCC-eeecCEEEECCccccccccC--C--CceEE-CCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCc
Confidence 46788889 99999999999999987763 2 34443 233344442 1 126899999854321 1
Q ss_pred CCCchhHHHHHHHHHHHHHh
Q psy3825 71 KPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 71 ~~~la~vA~~qG~vAA~nI~ 90 (332)
.......+..|++.+++.|.
T Consensus 443 ~~s~~~~~e~~~~~i~~~i~ 462 (545)
T 3uox_A 443 FCNVGVCGGLQAEWVLRMIS 462 (545)
T ss_dssp GSCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHH
Confidence 23456777889999888774
No 98
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.09 E-value=0.023 Score=56.45 Aligned_cols=84 Identities=15% Similarity=0.228 Sum_probs=51.6
Q ss_pred eeecCCeeEEEcCEEEEccCccccCcc--ccccccCceeecCCCeeecCC-CC--C------CCCcEEEecccCC----C
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEE--TAVSNAGVKVIPENAKIDSDN-EQ--T------NIPNVFAVGDVLH----E 70 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~--L~Le~aGl~ld~e~G~I~VDe-lq--T------SvpgIYAiGDva~----g 70 (332)
++.+++++++++|.||+|||.+|+... +.+. ..+..+ ++|...|+. .+ + ..++||+.|=+-. +
T Consensus 387 ~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~-~~l~~d-~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~ 464 (501)
T 4b63_A 387 GAANDVKETLEVDALMVATGYNRNAHERLLSKV-QHLRPT-GQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLS 464 (501)
T ss_dssp -----CCCEEEESEEEECCCEECCTHHHHTGGG-GGGSST-TCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTT
T ss_pred eeEeCCCeEEECCEEEECcCCCCCCcchhcchh-hhcCcC-cCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCcc
Confidence 456778899999999999999988632 1111 135555 567777776 43 2 2467999984321 2
Q ss_pred CCCchhHHHHHHHHHHHHHhCC
Q psy3825 71 KPELTPVAVQAGKLLAARLYGN 92 (332)
Q Consensus 71 ~~~la~vA~~qG~vAA~nI~G~ 92 (332)
.+.|.-.|.+.|+++ +.|+|.
T Consensus 465 ~~~Ls~~a~R~~~I~-~~l~g~ 485 (501)
T 4b63_A 465 DSLLSVLAVRGGEMV-QSIFGE 485 (501)
T ss_dssp TTSSTTHHHHHHHHH-HHHHHH
T ss_pred hhhHHHHHHHHHHHH-HHHhcc
Confidence 355666788877654 556664
No 99
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=94.52 E-value=0.028 Score=57.45 Aligned_cols=45 Identities=27% Similarity=0.346 Sum_probs=33.0
Q ss_pred CCeeecCC-CCCCCCcEEEecccCC----CCCCchhH----HHHHHHHHHHHHh
Q psy3825 46 NAKIDSDN-EQTNIPNVFAVGDVLH----EKPELTPV----AVQAGKLLAARLY 90 (332)
Q Consensus 46 ~G~I~VDe-lqTSvpgIYAiGDva~----g~~~la~v----A~~qG~vAA~nI~ 90 (332)
-|.|.||. +||++||+||+|+|+. |...+... +.-.|++|++++.
T Consensus 359 ~GGi~vd~~~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa 412 (602)
T 1kf6_A 359 MGGIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQAT 412 (602)
T ss_dssp CCEEECCTTSBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 57799999 9999999999999973 12233333 4445888887775
No 100
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.35 E-value=0.056 Score=54.51 Aligned_cols=80 Identities=14% Similarity=0.143 Sum_probs=53.0
Q ss_pred ceeecCCeeEEEcCEEEEccCccccCccccccccCceeecCCCeeecCC-C----------C-CCCCcEEEecccCC--C
Q psy3825 5 TGASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDSDN-E----------Q-TNIPNVFAVGDVLH--E 70 (332)
Q Consensus 5 ~~v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~VDe-l----------q-TSvpgIYAiGDva~--g 70 (332)
+++.+++| ++++|.||+|||.++++..+ .. +.+. .++.+.+++ . . ...||.|.+.--.+ +
T Consensus 374 ~gv~~~dG-~~~~D~iI~ATGf~~~~~~~--~~--~~i~-g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~ 447 (549)
T 4ap3_A 374 TGIVTTGA-HYDLDMIVLATGFDAMTGSL--DK--LEIV-GRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSV 447 (549)
T ss_dssp TEEEESSC-EEECSEEEECCCEEESSTTG--GG--SEEE-CGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGG
T ss_pred CcEEeCCC-ceecCEEEECCccccccccc--Cc--eeEE-CCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCc
Confidence 46788888 99999999999999998653 22 3333 233355542 2 1 25899999743221 1
Q ss_pred CCCchhHHHHHHHHHHHHHh
Q psy3825 71 KPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 71 ~~~la~vA~~qG~vAA~nI~ 90 (332)
.......+..|++.+++.|.
T Consensus 448 ~~s~~~~~e~~~~~i~~~i~ 467 (549)
T 4ap3_A 448 LANMVLHSELHVDWVADAIA 467 (549)
T ss_dssp GSCHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHH
Confidence 23455677788888888774
No 101
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=92.65 E-value=0.086 Score=54.79 Aligned_cols=38 Identities=8% Similarity=0.249 Sum_probs=28.5
Q ss_pred C-CCCCCCcEEEecccCC-CCCCchhHHHHHHHHHHHHHh
Q psy3825 53 N-EQTNIPNVFAVGDVLH-EKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 53 e-lqTSvpgIYAiGDva~-g~~~la~vA~~qG~vAA~nI~ 90 (332)
. ++|++||+||+|||+. +.......+..+|++++.++.
T Consensus 446 ~~~~t~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~ 485 (662)
T 3gyx_A 446 YNRMTTVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMV 485 (662)
T ss_dssp CTTBCSSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccCCeEeCccccccccCccHhHHHHHHHHHHHHHH
Confidence 7 8999999999999983 222336677777888777664
No 102
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.60 E-value=0.088 Score=42.95 Aligned_cols=36 Identities=19% Similarity=0.100 Sum_probs=30.1
Q ss_pred CCCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhC
Q psy3825 54 EQTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 54 lqTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G 91 (332)
++++.++||++||++. +. -++.|+..|+.||+.|..
T Consensus 290 ~~~~~~~v~l~GDa~~-g~-gv~~A~~sG~~aA~~I~~ 325 (336)
T 3kkj_A 290 LSDADLGIYVCGDWCL-SG-RVEGAWLSGQEAARRLLE 325 (336)
T ss_dssp EEETTTTEEECCGGGT-TS-SHHHHHHHHHHHHHHHHH
T ss_pred eeeCCCCEEEEecccC-Cc-CHHHHHHHHHHHHHHHHH
Confidence 5678899999999983 33 488999999999999873
No 103
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=92.50 E-value=0.1 Score=52.44 Aligned_cols=46 Identities=15% Similarity=0.244 Sum_probs=34.2
Q ss_pred CCeeecCC-CCCCCCcEEEecccCC-C---CCCchh----HHHHHHHHHHHHHhC
Q psy3825 46 NAKIDSDN-EQTNIPNVFAVGDVLH-E---KPELTP----VAVQAGKLLAARLYG 91 (332)
Q Consensus 46 ~G~I~VDe-lqTSvpgIYAiGDva~-g---~~~la~----vA~~qG~vAA~nI~G 91 (332)
-|.|.||. .||++||+||+|+|+. + ...+.. .|.-.|++|++++..
T Consensus 354 ~GGi~vd~~~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~ 408 (540)
T 1chu_A 354 CGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITR 408 (540)
T ss_dssp SCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEECCCCCCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHH
Confidence 47899999 9999999999999973 2 223333 345568888888764
No 104
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=92.02 E-value=0.092 Score=53.45 Aligned_cols=42 Identities=17% Similarity=0.084 Sum_probs=35.7
Q ss_pred eeecCC-CCC-CCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 48 KIDSDN-EQT-NIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 48 ~I~VDe-lqT-SvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
+|.+|+ ||| +++|+|++||.+ |...-...|..+|..+|+.|+
T Consensus 496 ri~~~~~~~~~~~~gly~~Gega-G~a~gi~~Aa~~G~~~a~~i~ 539 (549)
T 3nlc_A 496 CIKRGKDFQSVNLKGFYPAGEGA-GYAGGILSAGIDGIKVAEAVA 539 (549)
T ss_dssp ECCCTTTTSCTTCBTEEECHHHH-TSCCSHHHHHHHHHHHHHHHH
T ss_pred eEEECCCceECCcCCEEEccccC-ChhhHHHHHHHHHHHHHHHHH
Confidence 378899 998 899999999998 766667778888988888876
No 105
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=91.66 E-value=0.14 Score=53.16 Aligned_cols=45 Identities=20% Similarity=0.278 Sum_probs=31.9
Q ss_pred CCeeecCC-CCCCCCcEEEecccCC----CCCCchh----HHHHHHHHHHHHHh
Q psy3825 46 NAKIDSDN-EQTNIPNVFAVGDVLH----EKPELTP----VAVQAGKLLAARLY 90 (332)
Q Consensus 46 ~G~I~VDe-lqTSvpgIYAiGDva~----g~~~la~----vA~~qG~vAA~nI~ 90 (332)
-|+|.||. .||++||+||+|+|+. |...+.. .++-.|++|+.++.
T Consensus 372 ~GGi~vd~~~~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa 425 (660)
T 2bs2_A 372 MGGIRTDYRGEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFA 425 (660)
T ss_dssp CCEEECCTTSBCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred cceEEECCCCceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 57899999 9999999999999852 1122333 23455777777764
No 106
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=90.68 E-value=0.23 Score=50.95 Aligned_cols=37 Identities=19% Similarity=0.358 Sum_probs=27.8
Q ss_pred CCCCCCcEEEecccCCC-CCCchhHHHHHHHHHHHHHh
Q psy3825 54 EQTNIPNVFAVGDVLHE-KPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 54 lqTSvpgIYAiGDva~g-~~~la~vA~~qG~vAA~nI~ 90 (332)
.+|++||+||+|+|+.+ ...+...+..+|+++++++.
T Consensus 427 ~~t~I~GLyAaGe~a~~~~~r~~~~sl~~G~~ag~~aa 464 (643)
T 1jnr_A 427 RMTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAV 464 (643)
T ss_dssp TBCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCceeCCEEeeeccccccccccchhHHHHHHHHHHHHH
Confidence 56899999999999842 23355667778888877765
No 107
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=87.41 E-value=0.34 Score=48.47 Aligned_cols=46 Identities=17% Similarity=0.217 Sum_probs=32.6
Q ss_pred CCeeecCC-CC------CCCCcEEEecccCCCC---CCch----hHHHHHHHHHHHHHhC
Q psy3825 46 NAKIDSDN-EQ------TNIPNVFAVGDVLHEK---PELT----PVAVQAGKLLAARLYG 91 (332)
Q Consensus 46 ~G~I~VDe-lq------TSvpgIYAiGDva~g~---~~la----~vA~~qG~vAA~nI~G 91 (332)
-|.|.||+ +| |.+||+||+|+++.+. ..+. ..|+-.|++|++++..
T Consensus 502 ~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~ 561 (566)
T 1qo8_A 502 MGGVAINTTASVLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAK 561 (566)
T ss_dssp CCEECBCTTCEEEBTTSCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEECCCCeEECCCCCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Confidence 46788988 87 6899999999998421 1122 2455667888888753
No 108
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=85.39 E-value=0.32 Score=49.41 Aligned_cols=45 Identities=24% Similarity=0.308 Sum_probs=31.2
Q ss_pred CCeeecCC-CCC----------CCCcEEEecccCC-C---CCCchh----HHHHHHHHHHHHHh
Q psy3825 46 NAKIDSDN-EQT----------NIPNVFAVGDVLH-E---KPELTP----VAVQAGKLLAARLY 90 (332)
Q Consensus 46 ~G~I~VDe-lqT----------SvpgIYAiGDva~-g---~~~la~----vA~~qG~vAA~nI~ 90 (332)
-|+|.||. .|| ++||+||+|+|+. + ...+.. .+.-.|++|++++.
T Consensus 357 ~GGi~vd~~~~vl~~~~~~~g~~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa 420 (588)
T 2wdq_A 357 MGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQ 420 (588)
T ss_dssp CCBEEBCTTCEEEEECTTSCEEEEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHH
T ss_pred CceEEECCCCCCcccccccCCCeeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 46799999 888 7999999999863 1 122232 34455777777765
No 109
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=83.47 E-value=0.54 Score=46.98 Aligned_cols=46 Identities=17% Similarity=0.269 Sum_probs=32.6
Q ss_pred CCeeecCC-CC------CCCCcEEEecccCCC---CCCch----hHHHHHHHHHHHHHhC
Q psy3825 46 NAKIDSDN-EQ------TNIPNVFAVGDVLHE---KPELT----PVAVQAGKLLAARLYG 91 (332)
Q Consensus 46 ~G~I~VDe-lq------TSvpgIYAiGDva~g---~~~la----~vA~~qG~vAA~nI~G 91 (332)
-|.|.||+ +| |.+||+||+|.++.+ ...+. ..|+-.|++|++++..
T Consensus 507 ~GGl~id~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~ 566 (571)
T 1y0p_A 507 MGGVMIDTKAEVMNAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAK 566 (571)
T ss_dssp CCEEEBCTTCEEECTTSCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEECCCceEECCCCCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 46788888 77 689999999999732 11122 2456678999888763
No 110
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=82.44 E-value=0.64 Score=46.78 Aligned_cols=46 Identities=20% Similarity=0.245 Sum_probs=32.4
Q ss_pred CCeeecCC-CC-------CCCCcEEEecccCCC---CCCch----hHHHHHHHHHHHHHhC
Q psy3825 46 NAKIDSDN-EQ-------TNIPNVFAVGDVLHE---KPELT----PVAVQAGKLLAARLYG 91 (332)
Q Consensus 46 ~G~I~VDe-lq-------TSvpgIYAiGDva~g---~~~la----~vA~~qG~vAA~nI~G 91 (332)
-|.|.||+ +| |.+||+||+|.++.+ ...+. ..++-.|++|++++..
T Consensus 507 ~GGl~id~~~~Vl~~~g~~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~ 567 (572)
T 1d4d_A 507 MGGLVIDTKAEVKSEKTAKPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAK 567 (572)
T ss_dssp CCEEEBCTTCEEEBSSSSSEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEECCCCeEEcCCCCcccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 46688887 75 789999999999732 11122 3456778999988864
No 111
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=82.05 E-value=0.87 Score=44.84 Aligned_cols=46 Identities=13% Similarity=0.068 Sum_probs=33.1
Q ss_pred CCeeecCC-CC------CCCCcEEEecccCCCC---CCc----hhHHHHHHHHHHHHHhC
Q psy3825 46 NAKIDSDN-EQ------TNIPNVFAVGDVLHEK---PEL----TPVAVQAGKLLAARLYG 91 (332)
Q Consensus 46 ~G~I~VDe-lq------TSvpgIYAiGDva~g~---~~l----a~vA~~qG~vAA~nI~G 91 (332)
-|.|.||+ +| +.+||+||+|.++.+- ..+ ...++-.|++|++++.+
T Consensus 449 ~GGl~~d~~~~Vl~~~g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 449 LGGLRTTVNSEVLHVSGEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp CCEECBCTTCEEEBTTSSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred CcCeeECCCCceECCCCCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 46688888 77 6799999999998321 111 23566789999998864
No 112
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=81.60 E-value=0.56 Score=48.25 Aligned_cols=45 Identities=20% Similarity=0.270 Sum_probs=30.5
Q ss_pred CCeeecCC-CC---------CCCCcEEEecccCC----CCCCchh----HHHHHHHHHHHHHh
Q psy3825 46 NAKIDSDN-EQ---------TNIPNVFAVGDVLH----EKPELTP----VAVQAGKLLAARLY 90 (332)
Q Consensus 46 ~G~I~VDe-lq---------TSvpgIYAiGDva~----g~~~la~----vA~~qG~vAA~nI~ 90 (332)
-|.|.||. .| |++||+||+|+|+. |...+.. .++-.|++|+.++.
T Consensus 367 mGGi~~d~~~~Vl~~~~~~~t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa 429 (621)
T 2h88_A 367 MGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIA 429 (621)
T ss_dssp SCBEEBCTTSEEEEEETTEEEEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHH
T ss_pred cCcEeECCCCeEeecccCCCcccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHH
Confidence 36688887 66 67999999999863 1112232 34556888888775
No 113
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=76.85 E-value=2.2 Score=40.91 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=30.8
Q ss_pred cC-C-CCC-CCCcEEEecccCC--C--CCCchhHHHHHHHHHHHHHhC
Q psy3825 51 SD-N-EQT-NIPNVFAVGDVLH--E--KPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 51 VD-e-lqT-SvpgIYAiGDva~--g--~~~la~vA~~qG~vAA~nI~G 91 (332)
|| + |++ .+||+|++|++.+ + +--..+.|...|..|++++..
T Consensus 353 ~~~~tmes~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~~ 400 (401)
T 2gqf_A 353 ISSKTMESNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSISR 400 (401)
T ss_dssp BCTTTCBBSSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHHT
T ss_pred CChhhccccCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 46 4 775 7999999999986 1 112457899999999988753
No 114
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=65.07 E-value=4.5 Score=42.12 Aligned_cols=37 Identities=16% Similarity=0.230 Sum_probs=28.5
Q ss_pred CC-CCC-CCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 52 DN-EQT-NIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 52 De-lqT-SvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
++ |+| .++|+|++|+++ +...+. .|..+|.+|+.|+.
T Consensus 370 ~~tle~k~~~gLf~AGqi~-g~~Gy~-eA~a~G~~AG~naa 408 (641)
T 3cp8_A 370 RSTMETRPVENLFFAGQIN-GTSGYE-EAAAQGLMAGINAV 408 (641)
T ss_dssp CTTSBBSSSBTEEECSGGG-TBCCHH-HHHHHHHHHHHHHH
T ss_pred CCcccccCcCCEEEEEeec-CCccHH-HHHHHHHHHHHHHH
Confidence 45 788 599999999998 544444 77888888887775
No 115
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=58.20 E-value=7.7 Score=40.49 Aligned_cols=61 Identities=13% Similarity=0.107 Sum_probs=40.5
Q ss_pred CC-CCC-CCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh----CCCCcccccccceEEEEcCceeEEEcCCHHHHHHh
Q psy3825 52 DN-EQT-NIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY----GNGTTQMDYQNVATTVFTPLEYGCVGLSEEKAEEL 125 (332)
Q Consensus 52 De-lqT-SvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~----G~~~~~~~y~~vP~~vftdPe~AsVGLTEe~a~~~ 125 (332)
+. |+| .+||+|.+|.++ |..... .|..||.+|+.|+. |.+ ++ .+ ..+-|.+|...++...+
T Consensus 376 ~~tle~k~~~gLf~AGqin-GttGYe-EAaaqGl~AG~nAa~~~~~~~--~~---~~------~r~~ayiG~liddl~t~ 442 (651)
T 3ces_A 376 KPTLESKFIQGLFFAGQIN-GTTGYE-EAAAQGLLAGLNAARLSADKE--GW---AP------ARSQAYLGVLVDDLCTL 442 (651)
T ss_dssp CTTSBBSSSBTEEECSGGG-TCCCHH-HHHHHHHHHHHHHHHHHTTCC--CC---CC------CTTTCHHHHHHHHHHHH
T ss_pred CccccccCCCCeEEEEEec-CCcChH-HHHHHHHHHHHHHHHHhcCCC--CC---CC------ChhhhhhhhHHHHHHHh
Confidence 45 777 589999999998 554444 78888888888876 321 11 11 24556667666666654
No 116
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=56.59 E-value=7.4 Score=37.39 Aligned_cols=44 Identities=11% Similarity=0.154 Sum_probs=31.4
Q ss_pred CeeecCC--CCC----CCCcEEEecccCC--CC--CCchhHHHHHHHHHHHHHh
Q psy3825 47 AKIDSDN--EQT----NIPNVFAVGDVLH--EK--PELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 47 G~I~VDe--lqT----SvpgIYAiGDva~--g~--~~la~vA~~qG~vAA~nI~ 90 (332)
|.|.+|+ -+| .+||+||+|-+++ +. -...+.|...|++|++++.
T Consensus 387 GGv~~~~i~~~t~~~~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa 440 (447)
T 2i0z_A 387 GGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAG 440 (447)
T ss_dssp EEECGGGEETTTTEESSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHH
T ss_pred CceeeecccccccccCcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHH
Confidence 5677877 344 5999999999985 11 1123678888999988875
No 117
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=54.53 E-value=8.9 Score=39.91 Aligned_cols=38 Identities=16% Similarity=0.117 Sum_probs=28.6
Q ss_pred cCC-CCCC-CCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 51 SDN-EQTN-IPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 51 VDe-lqTS-vpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
.+. |+|. +||+|.+|+++ |.... ..|..||.+|+.|+.
T Consensus 380 l~~tLe~k~~~gLf~AGqin-Gt~Gy-eEAaaqGl~AG~nAa 419 (637)
T 2zxi_A 380 LYPTLETKKIRGLFHAGNFN-GTTGY-EEAAGQGIVAGINAA 419 (637)
T ss_dssp BCTTSBBSSSBTEEECGGGG-TBCSH-HHHHHHHHHHHHHHH
T ss_pred cCccccccCCCCEEEeeecC-CcchH-HHHHHHHHHHHHHHH
Confidence 346 7885 89999999998 54333 377788888888875
No 118
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=45.50 E-value=21 Score=32.01 Aligned_cols=44 Identities=18% Similarity=0.220 Sum_probs=30.1
Q ss_pred CeeecCC--CCCCCCcEEEecccCCCC-C---CchhHHHHHHHHHHHHHh
Q psy3825 47 AKIDSDN--EQTNIPNVFAVGDVLHEK-P---ELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 47 G~I~VDe--lqTSvpgIYAiGDva~g~-~---~la~vA~~qG~vAA~nI~ 90 (332)
|.+.+.. ..+..++|+.+||++... | +-...|+..|+.+|+.|.
T Consensus 263 ~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~ 312 (397)
T 3oz2_A 263 GGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTK 312 (397)
T ss_dssp EEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHH
Confidence 3455544 345678999999998411 2 225689999999998875
No 119
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=43.36 E-value=15 Score=35.37 Aligned_cols=41 Identities=17% Similarity=0.269 Sum_probs=29.3
Q ss_pred CeeecCC-----CCC-CCCcEEEecccCC-----CCCCchhHHHHHHHHHHHH
Q psy3825 47 AKIDSDN-----EQT-NIPNVFAVGDVLH-----EKPELTPVAVQAGKLLAAR 88 (332)
Q Consensus 47 G~I~VDe-----lqT-SvpgIYAiGDva~-----g~~~la~vA~~qG~vAA~n 88 (332)
|.|.+++ |++ .+||+|++|.+.+ |+ -..+.|...|..|++.
T Consensus 365 GGV~~~ei~~~tmesk~~~gLy~aGE~lD~~~~~GG-ynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 365 GGVDTRALDSRTMQAKEVPGLYFVGECVDVTGWLGG-YNFQWAWASGFVAGQD 416 (417)
T ss_dssp EEECGGGBCTTTCBBTTSTTEEECGGGBSEEECSSS-HHHHHHHHHHHHHHHH
T ss_pred CCCccccCChhhccccCCCCeEEEEEeEecccCCCC-HHHHHHHHHHHHHhCc
Confidence 4566654 555 6999999998875 32 2457888888877764
No 120
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=43.07 E-value=7 Score=39.90 Aligned_cols=41 Identities=22% Similarity=0.122 Sum_probs=30.1
Q ss_pred CeeEEEcCEEEEccCccccCccccccccCceeecCCCeeec
Q psy3825 11 KVFEDTYDTVLMAIGRRALTEETAVSNAGVKVIPENAKIDS 51 (332)
Q Consensus 11 dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld~e~G~I~V 51 (332)
+..++.+|.||+|+|..|+.++|.+...|...+.+...|.|
T Consensus 307 ~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~ 347 (623)
T 3pl8_A 307 DRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE 347 (623)
T ss_dssp CEEEECEEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS
T ss_pred cEEEEECCEEEEcCCCcCCHHHHHhcCCCccccccccCCCC
Confidence 34578999999999999999997777666654322334666
No 121
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=40.18 E-value=21 Score=33.32 Aligned_cols=33 Identities=15% Similarity=-0.017 Sum_probs=26.7
Q ss_pred CCCCcEEEecccCCCC-CCchhHHHHHHHHHHHHH
Q psy3825 56 TNIPNVFAVGDVLHEK-PELTPVAVQAGKLLAARL 89 (332)
Q Consensus 56 TSvpgIYAiGDva~g~-~~la~vA~~qG~vAA~nI 89 (332)
|. ||||.+||...+. ..+...|+..|+.||+.|
T Consensus 370 ~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 370 PL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp CC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 45 8999999998433 235689999999999998
No 122
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=38.58 E-value=30 Score=32.43 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=30.7
Q ss_pred CCCCCCcEEEecccCCC-CCCchhHHHHHHHHHHHHHhC
Q psy3825 54 EQTNIPNVFAVGDVLHE-KPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 54 lqTSvpgIYAiGDva~g-~~~la~vA~~qG~vAA~nI~G 91 (332)
+++.+++||.+||.++. .+...+-|+..|+.+|+.|+.
T Consensus 411 ~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~ 449 (453)
T 2yg5_A 411 SRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIA 449 (453)
T ss_dssp TTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHH
T ss_pred HhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHH
Confidence 56778999999998742 345788999999999998863
No 123
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=37.21 E-value=16 Score=32.50 Aligned_cols=25 Identities=16% Similarity=0.065 Sum_probs=20.8
Q ss_pred eecCCeeEEEcCEEEEccCccccCc
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTE 31 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~ 31 (332)
+.+.+++++.+|.||+|||.+|...
T Consensus 96 v~~~~g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 96 IVTKDHTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp EEETTCCEEEEEEEEECCCCEEECC
T ss_pred EEECCCCEEEeCEEEEccCCccccc
Confidence 4566788999999999999988654
No 124
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=35.69 E-value=17 Score=36.40 Aligned_cols=37 Identities=11% Similarity=0.068 Sum_probs=27.4
Q ss_pred CC-CCC-CCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 52 DN-EQT-NIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 52 De-lqT-SvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
+. |+| .++|+|.+|+++ |-... ..|..+|.+|+.|+.
T Consensus 320 ~~tle~k~~~~Lf~AGqi~-G~~Gy-~eAaa~Gl~AG~naa 358 (443)
T 3g5s_A 320 GETLEFREAEGLYAAGVLA-GVEGY-LESAATGFLAGLNAA 358 (443)
T ss_dssp CTTSEETTEEEEEECGGGG-TBCSH-HHHHHHHHHHHHHHH
T ss_pred ChhceecCCCCEEECcccc-ccHHH-HHHHHhHHHHHHHHH
Confidence 46 887 699999999998 54333 467777877777765
No 125
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=34.74 E-value=23 Score=32.76 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=25.9
Q ss_pred CCCCCcEEEecccCCCC-CCchhHHHHHHHHHHHHHhC
Q psy3825 55 QTNIPNVFAVGDVLHEK-PELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 55 qTSvpgIYAiGDva~g~-~~la~vA~~qG~vAA~nI~G 91 (332)
+|.++|+|.+||-+.+. ..-.+.++..|+.+++.|+|
T Consensus 388 ~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 388 ETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp BCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC---
T ss_pred CCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhhC
Confidence 35578999999998431 34567778889999988865
No 126
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=31.40 E-value=23 Score=30.56 Aligned_cols=25 Identities=16% Similarity=0.202 Sum_probs=20.7
Q ss_pred eecCCeeEEEcCEEEEccCccccCc
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTE 31 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~ 31 (332)
+.+++++++.+|.|++|+|.+|+..
T Consensus 91 v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 91 VEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEECCCCEEEcCEEEECCCCCCCCC
Confidence 4556777899999999999988764
No 127
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=30.24 E-value=27 Score=32.94 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=21.6
Q ss_pred eecCCeeEEEcCEEEEccCccccCcc
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEE 32 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~ 32 (332)
+.+++++++.+|.+++|+|.+|+...
T Consensus 95 v~~~~g~~~~yd~lvlAtG~~p~~p~ 120 (385)
T 3klj_A 95 VTLKSGEKIKYEKLIIASGSIANKIK 120 (385)
T ss_dssp EEETTSCEEECSEEEECCCEEECCCC
T ss_pred EEECCCCEEECCEEEEecCCCcCCCC
Confidence 55667889999999999999887643
No 128
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=28.07 E-value=39 Score=32.12 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=21.9
Q ss_pred CCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHh
Q psy3825 56 TNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLY 90 (332)
Q Consensus 56 TSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~ 90 (332)
|.+||+|.+||-+..+ .-++-|...|+.||+.|+
T Consensus 455 t~i~gLyl~G~~t~pG-~Gv~ga~~SG~~aA~~il 488 (501)
T 4dgk_A 455 KTITNLYLVGAGTHPG-AGIPGVIGSAKATAGLML 488 (501)
T ss_dssp -CCTTEEECCCH-------HHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCc-ccHHHHHHHHHHHHHHHH
Confidence 5689999999987311 235667777888877765
No 129
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=27.53 E-value=34 Score=32.49 Aligned_cols=27 Identities=19% Similarity=0.276 Sum_probs=22.2
Q ss_pred eeecCCeeEEEcCEEEEccCccccCcc
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRALTEE 32 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PNt~~ 32 (332)
.+.+++++++.+|.|++|+|.+|+...
T Consensus 90 ~V~~~~g~~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 90 NITLADGNTVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp EEEETTSCEEECSEEEECCCCEECGGG
T ss_pred EEEECCCCEEECCEEEECCCCCcCccc
Confidence 355667788999999999999998654
No 130
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=26.98 E-value=44 Score=28.49 Aligned_cols=38 Identities=16% Similarity=0.050 Sum_probs=30.7
Q ss_pred CCCCCcEEEecccCCCCCCchhHHHHHHHHHHHHHhCC
Q psy3825 55 QTNIPNVFAVGDVLHEKPELTPVAVQAGKLLAARLYGN 92 (332)
Q Consensus 55 qTSvpgIYAiGDva~g~~~la~vA~~qG~vAA~nI~G~ 92 (332)
+....+||.+||-++.....++-|+..|..+|..|+..
T Consensus 114 ~~p~grl~FAGe~ts~~~g~~eGAl~SG~raA~~i~~~ 151 (181)
T 2e1m_C 114 VRPEGPVYFAGEHVSLKHAWIEGAVETAVRAAIAVNEA 151 (181)
T ss_dssp HSCBTTEEECSGGGTTSTTSHHHHHHHHHHHHHHHHTC
T ss_pred hCCCCcEEEEEHHHcCCccCHHHHHHHHHHHHHHHHHH
Confidence 33457899999998544567899999999999999853
No 131
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=26.16 E-value=21 Score=36.09 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=25.6
Q ss_pred eecCCeeEEEcCEEEEccCccccCccccccccCceee
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEETAVSNAGVKVI 43 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~L~Le~aGl~ld 43 (332)
+.+.+++++.+|.||+|+|..+......+...|+.+.
T Consensus 256 V~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~~ 292 (549)
T 3nlc_A 256 VTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVYME 292 (549)
T ss_dssp EEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCCCE
T ss_pred EEECCCCEEECCEEEECCCCChhhHHHHHHHcCCCcc
Confidence 5566778899999999999988632111445555543
No 132
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=24.87 E-value=67 Score=30.94 Aligned_cols=38 Identities=16% Similarity=0.170 Sum_probs=30.6
Q ss_pred CCCCCCcEEEecccCC-CCCCchhHHHHHHHHHHHHHhC
Q psy3825 54 EQTNIPNVFAVGDVLH-EKPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 54 lqTSvpgIYAiGDva~-g~~~la~vA~~qG~vAA~nI~G 91 (332)
+++.+++||.+||.+. ..+...+-|+..|..+|+.|+.
T Consensus 414 l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~ 452 (520)
T 1s3e_A 414 LRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILH 452 (520)
T ss_dssp TTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHH
Confidence 5667789999999863 2345788999999999999874
No 133
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=24.43 E-value=47 Score=31.65 Aligned_cols=38 Identities=18% Similarity=0.094 Sum_probs=30.6
Q ss_pred CCCCCCcEEEecccCCC-CCCchhHHHHHHHHHHHHHhC
Q psy3825 54 EQTNIPNVFAVGDVLHE-KPELTPVAVQAGKLLAARLYG 91 (332)
Q Consensus 54 lqTSvpgIYAiGDva~g-~~~la~vA~~qG~vAA~nI~G 91 (332)
+++.+++||.+||.+.. ....++-|+..|..||+.|+.
T Consensus 418 l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~ 456 (472)
T 1b37_A 418 LRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILIN 456 (472)
T ss_dssp HHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHH
T ss_pred HhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHH
Confidence 45667899999999843 255789999999999998873
No 134
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=23.56 E-value=42 Score=31.88 Aligned_cols=24 Identities=17% Similarity=0.267 Sum_probs=20.4
Q ss_pred eeecCCeeEEEcCEEEEccCcccc
Q psy3825 6 GASMDKVFEDTYDTVLMAIGRRAL 29 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtGr~PN 29 (332)
.|.+++|++++.|.+++|+|.+++
T Consensus 87 ~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 87 TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEETTCCEEECSEEEECCCCEEE
T ss_pred EEEECCCCEEECCEEEEeCCCCcc
Confidence 466778889999999999998764
No 135
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=23.21 E-value=44 Score=31.81 Aligned_cols=26 Identities=19% Similarity=0.224 Sum_probs=21.2
Q ss_pred eecCCeeEEEcCEEEEccCccccCcc
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEE 32 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~ 32 (332)
+.+++++++.+|.|++|+|.+|+...
T Consensus 93 v~~~~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 93 VILSDGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEETTSCEEECSEEEECCCEEECCCG
T ss_pred EEECCCCEEECCEEEEcCCCCccCCC
Confidence 44556778999999999999997754
No 136
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=23.07 E-value=43 Score=29.32 Aligned_cols=26 Identities=19% Similarity=0.092 Sum_probs=20.5
Q ss_pred eecCCeeEEEcCEEEEccCccccCcc
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEE 32 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~ 32 (332)
+.++++.++.+|.||+|+|.+|....
T Consensus 100 ~~~~~~~~~~~~~liiATG~~~~~~~ 125 (314)
T 4a5l_A 100 LFTEEGKEVLTKSVIIATGATAKRMH 125 (314)
T ss_dssp EEETTCCEEEEEEEEECCCEEECCCC
T ss_pred EEECCCeEEEEeEEEEcccccccccC
Confidence 34566788999999999998886533
No 137
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=22.95 E-value=40 Score=29.78 Aligned_cols=24 Identities=21% Similarity=-0.054 Sum_probs=19.5
Q ss_pred ecCCeeEEEcCEEEEccCccccCc
Q psy3825 8 SMDKVFEDTYDTVLMAIGRRALTE 31 (332)
Q Consensus 8 ~~~dg~~I~aD~VLvAtGr~PNt~ 31 (332)
...+++++.+|.+|+|||.+|...
T Consensus 96 ~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 96 INFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EECSSCEEEEEEEEECCCEEECCC
T ss_pred eccCCeEEEeceeEEcccCccCcC
Confidence 345667899999999999988753
No 138
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=22.45 E-value=34 Score=23.43 Aligned_cols=11 Identities=45% Similarity=0.594 Sum_probs=9.9
Q ss_pred cCCHHHHHHhc
Q psy3825 116 GLSEEKAEELY 126 (332)
Q Consensus 116 GLTEe~a~~~~ 126 (332)
|||++||+|.+
T Consensus 2 gLT~~EA~EfH 12 (41)
T 1nkz_B 2 TLTAEQSEELH 12 (41)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 89999999974
No 139
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=22.44 E-value=51 Score=31.09 Aligned_cols=26 Identities=15% Similarity=0.222 Sum_probs=21.8
Q ss_pred eecCCeeEEEcCEEEEccCccccCcc
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEE 32 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~ 32 (332)
+.+++++++.+|.+++|+|.+|+...
T Consensus 88 v~~~~g~~i~~d~liiAtG~~~~~pg 113 (430)
T 3h28_A 88 VTTQSGKKIEYDYLVIATGPKLVFGA 113 (430)
T ss_dssp EEETTCCEEECSEEEECCCCEEECCS
T ss_pred EEECCCcEEECCEEEEcCCcccccCC
Confidence 55567778999999999999988764
No 140
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=21.53 E-value=93 Score=30.95 Aligned_cols=26 Identities=23% Similarity=0.133 Sum_probs=19.8
Q ss_pred eeecCCeeEEEcCEEEEccC--ccccCc
Q psy3825 6 GASMDKVFEDTYDTVLMAIG--RRALTE 31 (332)
Q Consensus 6 ~v~~~dg~~I~aD~VLvAtG--r~PNt~ 31 (332)
.+.+++|+++.+|.||+|+| .+|+..
T Consensus 137 ~V~~~~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 137 TVRTDRGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp EEEETTCCEEEEEEEEECCCSEEECCCC
T ss_pred EEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 35566778899999999999 555543
No 141
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=21.46 E-value=47 Score=28.89 Aligned_cols=26 Identities=19% Similarity=0.176 Sum_probs=20.7
Q ss_pred eecCCeeEEEcCEEEEccCccccCcc
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEE 32 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~ 32 (332)
+.++++.++.+|.|++|+|..|+...
T Consensus 104 v~~~~g~~~~~d~lvlAtG~~~~~~~ 129 (323)
T 3f8d_A 104 VKTKRKGEFKADSVILGIGVKRRKLG 129 (323)
T ss_dssp EEESSSCEEEEEEEEECCCCEECCCC
T ss_pred EEECCCCEEEcCEEEECcCCCCccCC
Confidence 44556678999999999999987643
No 142
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=20.72 E-value=55 Score=30.19 Aligned_cols=26 Identities=23% Similarity=0.213 Sum_probs=22.0
Q ss_pred eecCCeeEEEcCEEEEccCccccCcc
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTEE 32 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~~ 32 (332)
+.+.++.++..|.+++|+|.+++...
T Consensus 87 v~~~~g~~i~yd~LviAtG~~~~~~~ 112 (401)
T 3vrd_B 87 VKTAGGAEFAYDRCVVAPGIDLLYDK 112 (401)
T ss_dssp EEETTSCEEECSEEEECCCEEECGGG
T ss_pred EEecccceeecceeeeccCCccccCC
Confidence 56677889999999999999887654
No 143
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=20.65 E-value=50 Score=28.93 Aligned_cols=25 Identities=8% Similarity=-0.039 Sum_probs=19.8
Q ss_pred eecCCeeEEEcCEEEEccCccccCc
Q psy3825 7 ASMDKVFEDTYDTVLMAIGRRALTE 31 (332)
Q Consensus 7 v~~~dg~~I~aD~VLvAtGr~PNt~ 31 (332)
+.+++++++.+|.|++|+|.+|...
T Consensus 94 v~~~~g~~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 94 IETASGAVLKARSIIVATGAKWRNM 118 (310)
T ss_dssp EEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEECCCCEEEeCEEEECcCCCcCCC
Confidence 3455667899999999999988653
Done!