RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3833
(1087 letters)
>d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein
1, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 629
Score = 328 bits (842), Expect = e-100
Identities = 133/558 (23%), Positives = 206/558 (36%), Gaps = 81/558 (14%)
Query: 133 LRPDRVAMQDATAQMAMLQFIS--------SGLPRV---AVPSTIHCDHLIEAQVGGVED 181
+P RV +QD T A++ F + G P P+ + DH I+ D
Sbjct: 77 FKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRAD 136
Query: 182 -----LKRAKSQNEEVYAFLRS-AGAKYGVGFWHPGSGIIHQIILENYAFPGL------- 228
+N E + FL+ + A + + PGSGIIHQ+ LE A
Sbjct: 137 SLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYY 196
Query: 229 --LMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGGLKGWTSS 286
++GTDSHT GLG L GVGG +A VM P + P+VIG RL G +S
Sbjct: 197 PDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTS 256
Query: 287 KDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNKRIN 346
D++L + L G G +E+ GPG+ +S TI NM E GAT + FP ++
Sbjct: 257 TDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSI 316
Query: 347 EYHGPGIDNISCTGMGTICNMGAE----IGATTSVFPYNQRINIDNISCTGMGTICNMGA 402
Y + + + Q + +D + T+ +
Sbjct: 317 TYLVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVELD------LKTVVPCCS 370
Query: 403 EIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPH 462
++ DF +S L +G K Q+ N
Sbjct: 371 GPKRPQDKVAVSDMKKDF----------------ESCLGAKQGFKGFQVAPEHHN----- 409
Query: 463 VNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASI-AKEAMAHG 521
+ + + + ++ I SCTN S + A + AK+A+ G
Sbjct: 410 ----------DHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAG 459
Query: 522 --LKSSTPFNVTPGSEQIRATIERDGIAQ-------TLREFGGTVLANACGPCIGQWNRK 572
+ +++PGS + ++ G+ + +G GP
Sbjct: 460 LNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSGPLPEPVVEA 519
Query: 573 DVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPRSDTL-TGS 631
+ V S NRNF GR N ++ SP LV A AI GT+ D + L +
Sbjct: 520 ITQGDLVAVGVLSGNRNFEGRVHPNTRA-NYLASPPLVIAYAIAGTIRIDFEKEPLGVNA 578
Query: 632 DGKPFKLRD--PFGDELP 647
G+ L+D P DE+
Sbjct: 579 KGQQVFLKDIWPTRDEIQ 596
>d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos
taurus) [TaxId: 9913]}
Length = 527
Score = 272 bits (697), Expect = 3e-81
Identities = 199/281 (70%), Positives = 230/281 (81%)
Query: 386 IDNISCTGMGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEG 445
+D+ISCTGM TICNMGAEIGATTSVFPYN+RM +L T R DIA A +++ L PD G
Sbjct: 244 VDSISCTGMATICNMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADEFKDHLVPDSG 303
Query: 446 AKYDQLIELDLNTLEPHVNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYE 505
YDQLIE++L+ L+PH+NGPFTPDLAHP+ ++G A+K GWP+DI+V LIGSCTN+SYE
Sbjct: 304 CHYDQLIEINLSELKPHINGPFTPDLAHPVAEVGSVAEKEGWPLDIRVGLIGSCTNSSYE 363
Query: 506 DMSRCASIAKEAMAHGLKSSTPFNVTPGSEQIRATIERDGIAQTLREFGGTVLANACGPC 565
DM R A++AK+A+AHGLK + F +TPGSEQIRATIERDG AQ LR+ GG VLANACGPC
Sbjct: 364 DMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQVLRDVGGIVLANACGPC 423
Query: 566 IGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPRS 625
IGQW+RKD+K GEKNTIV SYNRNFTGRNDANP THAFVTSPE+VTALAI GTL F+P +
Sbjct: 424 IGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPET 483
Query: 626 DTLTGSDGKPFKLRDPFGDELPTKGFDPGVDTYQPPPKDGS 666
D LTG DGK FKL P DELP FDPG DTYQ PPKD S
Sbjct: 484 DFLTGKDGKKFKLEAPDADELPRAEFDPGQDTYQHPPKDSS 524
Score = 213 bits (544), Expect = 3e-60
Identities = 192/249 (77%), Positives = 215/249 (86%), Gaps = 10/249 (4%)
Query: 113 KGRTLAD----------SSYEAEQTGPHSRLRPDRVAMQDATAQMAMLQFISSGLPRVAV 162
+ TL++ ++ E E+ + RLRPDRVAMQDATAQMAMLQFISSGLP+VAV
Sbjct: 33 RPLTLSEKIVYGHLDDPANQEIERGKTYLRLRPDRVAMQDATAQMAMLQFISSGLPKVAV 92
Query: 163 PSTIHCDHLIEAQVGGVEDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILEN 222
PSTIHCDHLIEAQ+GG +DL+RAK N+EVY FL +AGAKYGVGFW PGSGIIHQIILEN
Sbjct: 93 PSTIHCDHLIEAQLGGEKDLRRAKDINQEVYNFLATAGAKYGVGFWRPGSGIIHQIILEN 152
Query: 223 YAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGGLKG 282
YA+PG+L+IGTDSHTPNGGGLGG+CIGVGGADAVDVMA IPWELKCPKVIGV+LTG L G
Sbjct: 153 YAYPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSG 212
Query: 283 WTSSKDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYN 342
WTS KDVILKVAGILTVKGGTGAI+EYHGPG+D+ISCTGM TICNMGAEIGATTSVFPYN
Sbjct: 213 WTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATICNMGAEIGATTSVFPYN 272
Query: 343 KRINEYHGP 351
R+ +Y
Sbjct: 273 HRMKKYLSK 281
>d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 490
Score = 260 bits (665), Expect = 4e-77
Identities = 87/522 (16%), Positives = 153/522 (29%), Gaps = 83/522 (15%)
Query: 111 ASKGRTLAD------SSYEAEQTGPHSRLRPDRVAMQDATAQMAMLQFISSGLPRVAVPS 164
+ +G +LA + + G + + V QD T M + +
Sbjct: 6 SDRGFSLAQKMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADL 65
Query: 165 T-IHCDHLIEAQVGGVEDLKRAKSQNEEVYAFLRSAGAKYGVGFWHPGSGIIHQIILENY 223
H K + + L G PG G+IH L
Sbjct: 66 VMQSFCHTAAY----------PKPVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSW-LNRM 114
Query: 224 AFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVRLTGGLKGW 283
P + G DSHT G+ G A L P+ + VR G ++
Sbjct: 115 LLPDTVGTGGDSHTRFPIGIS---FPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPG 171
Query: 284 TSSKDVILKVAGILTVKGGTGAIIEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNK 343
+ +D++ + +G +
Sbjct: 172 ITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGR-------------------------- 205
Query: 344 RINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTGMGTICNMGAE 403
G+ ++ + + AE A N+ I+ +
Sbjct: 206 ---ILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYL-------------N 249
Query: 404 IGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIELDLNTLEPH- 462
+ D R ++ + LL D A+Y +I++DL ++
Sbjct: 250 SNIVLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPI 309
Query: 463 VNGPFTPDLAHPINKLGEAAKKNGWPMDIKVSLIGSCTNASYEDMSRCASIAKEAMAHGL 522
+ P PD A P++ + + IGSC ++ + K AH
Sbjct: 310 LCAPNDPDDARPLSAVQGEKIDEVF--------IGSCMT----NIGHFRAAGKLLDAHKG 357
Query: 523 KSSTPFNVTPGSEQIRATIERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTI 582
+ T V P + A + +G + G + C C+G R + + T+
Sbjct: 358 QLPTRLWVAPPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQAR----VADGATV 413
Query: 583 VNSYNRNFTGRNDANPATHAFVTSPELVTALAIKGTLAFDPR 624
V++ RNF R + F+ S EL A+ G L P
Sbjct: 414 VSTSTRNFPNRLG--TGANVFLASAELAAVAALIGKLP-TPE 452
>d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow
(Bos taurus) [TaxId: 9913]}
Length = 226
Score = 249 bits (636), Expect = 2e-76
Identities = 151/213 (70%), Positives = 177/213 (83%)
Query: 670 VDVDPKSQRLQLLEPFDVWDKKDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNISN 729
VDV P SQRLQLLEPFD WD KD++D+ +LIKVKGKCTTDHISAAGPWLKFRGHLDNISN
Sbjct: 1 VDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISN 60
Query: 730 NLFLTATNAENGEMNKVKNQLTGQYGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAA 789
NL + A N+EN + N V+N +T ++GPV + AR YK G+ WV +GDENYGEGSSREH+A
Sbjct: 61 NLLIGAINSENRKANSVRNAVTQEFGPVPDTARYYKQHGIRWVVIGDENYGEGSSREHSA 120
Query: 790 LEPRHLGGRAIIVKSFARIHETNLKKQGLLPLTFANPSDYDKIQPNDRISLVGLKDLAPG 849
LEPR LGGRAII KSFARIHETNLKKQGLLPLTFA+P+DY+KI P D++++ GLKD APG
Sbjct: 121 LEPRFLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKDFAPG 180
Query: 850 KPVTAQIKHADGKVEEIKLNHSMNEQQITWFQA 882
KP+T IKH +G E I LNH+ NE QI WF+A
Sbjct: 181 KPLTCIIKHPNGTQETILLNHTFNETQIEWFRA 213
>d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein
1, C-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 259
Score = 140 bits (354), Expect = 8e-38
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 673 DPKSQRLQLLEPFDVWDK-----KDIKDMVVLIKVKGKCTTDHISAAGPWLKFRGHLDNI 727
+ KS ++ F+ K I D VL+ + TTDHIS AG + +
Sbjct: 7 NSKSTYIKSPPFFENLTLDLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYL 66
Query: 728 SNNLFLTATNAENGEMN--------------------------KVKNQLTGQYGPVNEVA 761
+N G + + +G+ V + A
Sbjct: 67 TNRGLTPREFNSYGSRRGNDAVMARGTFANIRLLNRFLNKQAPQTIHLPSGEILDVFDAA 126
Query: 762 RAYKAAGVPWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNLKKQGLLPL 821
Y+ AG+P + + + YG GSSR+ AA P LG +A++ +S+ RIH +NL G++PL
Sbjct: 127 ERYQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPL 186
Query: 822 TFANPSDYDKI--QPNDRISLVGLKDLAPGKPVTAQIKHADGKVEEIKLNHSMNEQQITW 879
+ + D + +R +++ ++L P V +K GK + + + ++T+
Sbjct: 187 EYLPGENADALGLTGQERYTIIIPENLKPQMKVQ--VKLDTGKTFQAVMRFD-TDVELTY 243
Query: 880 FQA 882
F
Sbjct: 244 FLN 246
>d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 162
Score = 58.8 bits (142), Expect = 2e-10
Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 37/147 (25%)
Query: 701 KVKGKC-------TTDHISAAGPWLKFRGHLDNISNNLFLTATNAENGEMNKVKNQLTGQ 753
GK +TD I+ + + ++ F
Sbjct: 2 ITTGKVWKFGDDISTDEITPGR-YNLTKDP-KELAKIAF--------------------- 38
Query: 754 YGPVNEVARAYKAAGVPWVAVGDENYGEGSSREHAALEPRHLGGRAIIVKSFARIHETNL 813
+ + V V +N+G GSSRE AAL + LG +I +SF RI N
Sbjct: 39 ---IEVRPDFARNVRPGDVVVAGKNFGIGSSRESAALALKALGIAGVIAESFGRIFYRNA 95
Query: 814 KKQGLLPLTFANPSDYDKIQPNDRISL 840
G+ L + ++ D +++
Sbjct: 96 INIGIPLLL----GKTEGLKDGDLVTV 118
>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain
[TaxId: 10090]}
Length = 106
Score = 50.5 bits (119), Expect = 3e-08
Identities = 14/92 (15%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 991 KRFTMKAYKRLWVTCRELQLRFYKSREDAQHSS---PINEFSLRGCEVTPDVNLSQGKFI 1047
K+ + +++ ++ ++ FYK + A SL+ ++ + K +
Sbjct: 16 KKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHV 75
Query: 1048 IKLEVPAADGMSEMFLRCENEEQYASWMAACR 1079
KL + +E + +++E+ +W+ A
Sbjct: 76 FKLRLS---DGNEYLFQAKDDEEMNTWIQAIS 104
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 122
Score = 49.5 bits (117), Expect = 1e-07
Identities = 9/96 (9%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 991 KRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFS-----LRGCEVTPDVNLSQGK 1045
K+ + +++ ++++ + ++ FYK ++ + + + L+ + + ++ K
Sbjct: 25 KKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKK 84
Query: 1046 FIIKLEVPAADGMSEMFLRCENEEQYASWMAACRLQ 1081
++++++ + L+ ++ + + W+ + + Q
Sbjct: 85 HVLRVKLA---NGALFLLQAHDDTEMSQWVTSLKAQ 117
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1,
PEPP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 46.5 bits (109), Expect = 9e-07
Identities = 18/92 (19%), Positives = 27/92 (29%), Gaps = 4/92 (4%)
Query: 988 LKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFI 1047
K ++ +KR W L +YK + + S P +F
Sbjct: 16 HKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAP-RGRRFT 74
Query: 1048 IKLEVPAADGMSEMFLRCENEEQYASWMAACR 1079
E P GM L + E W+ A
Sbjct: 75 FTAEHP---GMRTYVLAADTLEDLRGWLRALG 103
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 116
Score = 45.3 bits (106), Expect = 2e-06
Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 5/97 (5%)
Query: 988 LKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFI 1047
L + K +K R+ + + + P+ FSLRG V+ + +
Sbjct: 17 LAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGV 76
Query: 1048 IKLEVPAAD-----GMSEMFLRCENEEQYASWMAACR 1079
+ +++ ++ + A W+ A +
Sbjct: 77 KGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIK 113
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 43.0 bits (100), Expect = 2e-05
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 988 LKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFI 1047
L K +K +WV E + FYK + +SP L+G +T +
Sbjct: 11 LVKKGSVFNTWKPMWVVLLEDGIEFYKKK---SDNSPKGMIPLKGSTLTSPCQDFGKRMF 67
Query: 1048 IKLEVPAADGMSEMFLRCENEEQYASWMAACR 1079
+ + F + E+ +W+
Sbjct: 68 VFKITTT--KQQDHFFQAAFLEERDAWVRDIN 97
>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}
Length = 111
Score = 42.6 bits (99), Expect = 2e-05
Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 2/93 (2%)
Query: 989 KPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFII 1048
K W L +YK E+ + ++ +L+ +V S+ F +
Sbjct: 12 NNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFAL 71
Query: 1049 KLEVPAADGMSEM--FLRCENEEQYASWMAACR 1079
L CE +E+ SW A+
Sbjct: 72 FNTEQRNVYKDYRQLELACETQEEVDSWKASFL 104
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 209
Score = 44.5 bits (104), Expect = 2e-05
Identities = 9/91 (9%), Positives = 22/91 (24%), Gaps = 3/91 (3%)
Query: 989 KPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFII 1048
K F +++ W + +Y S +D Q +
Sbjct: 115 KDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCF 174
Query: 1049 KLEVPAADGMSEMFLRCENEEQYASWMAACR 1079
++ P + + W+ +
Sbjct: 175 EICAP---DKRIYQFTAASPKDAEEWVQQLK 202
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 127
Score = 40.3 bits (93), Expect = 2e-04
Identities = 14/116 (12%), Positives = 34/116 (29%), Gaps = 22/116 (18%)
Query: 988 LKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFI 1047
L +K +KR W + L +++ P L + ++ +
Sbjct: 11 LLKLGGRVKTWKRRWFILTDNCLYYFEYT---TDKEPRGIIPLENLSIREVLD-PRKPNC 66
Query: 1048 IKLEVPAADGMSEM------------------FLRCENEEQYASWMAACRLQLTEN 1085
+L P+ G + + E+ WM + + ++ +
Sbjct: 67 FELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 122
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 39.0 bits (90), Expect = 3e-04
Identities = 12/97 (12%), Positives = 35/97 (36%), Gaps = 4/97 (4%)
Query: 988 LKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFI 1047
+ MK +KR + E + ++KS + + I + + ++ +
Sbjct: 9 CVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNL 68
Query: 1048 IKLEVPAADGMSEMFLRCENEEQYASWMAACRLQLTE 1084
++ +++ ++ E+ SW+ A +
Sbjct: 69 FEIVTT----SRTFYVQADSPEEMHSWIKAVSGAIVA 101
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein
SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 38.7 bits (89), Expect = 4e-04
Identities = 10/89 (11%), Positives = 24/89 (26%), Gaps = 3/89 (3%)
Query: 989 KPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFII 1048
K F +++ W +Y + + P F ++G V +L +
Sbjct: 12 KDHSFFGSEWQKRWCVVSRGLFYYYANE---KSKQPKGTFLIKGYSVRMAPHLRRDSKKE 68
Query: 1049 KLEVPAADGMSEMFLRCENEEQYASWMAA 1077
+ + + W+
Sbjct: 69 SCFELTSQDRRTYEFTATSPAEARDWVDQ 97
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 111
Score = 35.7 bits (81), Expect = 0.006
Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 3/91 (3%)
Query: 989 KPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQGKFII 1048
K F +++ W + +Y S + EF++ G +V + L +
Sbjct: 20 KDHSFLGFEWQKRWCALSKTVFYYYGSD---KDKQQKGEFAIDGYDVRMNNTLRKDGKKD 76
Query: 1049 KLEVPAADGMSEMFLRCENEEQYASWMAACR 1079
A + + W+ +
Sbjct: 77 CCFEICAPDKRIYQFTAASPKDAEEWVQQLK 107
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 169
Score = 36.0 bits (82), Expect = 0.008
Identities = 14/125 (11%), Positives = 34/125 (27%), Gaps = 24/125 (19%)
Query: 986 RCLKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSS----PINEFSLRGCEVTPDVNL 1041
R + K+ + +K+ +L +Y+ + I+ + E
Sbjct: 12 RSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKN 71
Query: 1042 SQGKFIIKLEVPAADGMSEM-------------------FLRCENEEQYASWMAACRLQL 1082
+ I + M ++ ++ EE W+ + +
Sbjct: 72 PPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLK-NV 130
Query: 1083 TENNS 1087
NS
Sbjct: 131 IRYNS 135
>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 34.6 bits (78), Expect = 0.011
Identities = 11/94 (11%), Positives = 25/94 (26%), Gaps = 7/94 (7%)
Query: 984 YLRCLKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQ 1043
YL + R + + L + + + C V +
Sbjct: 10 YLNARNKTGLVSSTWDRQFYFTQGGNLMSQARGDV----AGGLAMDIDNCSVMAVDCEDR 65
Query: 1044 GKFIIKLEVPAADGMSEMFLRCENEEQYASWMAA 1077
+ DG L+ E+++ + W+
Sbjct: 66 RYCFQIT---SFDGKKSSILQAESKKDHEEWICT 96
>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 34.5 bits (78), Expect = 0.013
Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 13/96 (13%)
Query: 984 YLRCLKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDVNLSQ 1043
+L L P+ + +++ WV L + +Y + ++ I L ++
Sbjct: 6 WLDKLSPQ--GKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIP---LSAISTVRVQGDNK 60
Query: 1044 GKFIIKLEVPAADGMSEMFLRCENEEQYASWMAACR 1079
+ + R E EE+ W++
Sbjct: 61 FEVVT--------TQRTFVFRVEKEEERNDWISILL 88
>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId:
9606]}
Length = 95
Score = 33.4 bits (75), Expect = 0.024
Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 11/98 (11%)
Query: 980 ELYDYLRCLKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRGCEVTPDV 1039
E YL L + +K W + R+ L FY+ R + SL GCEV PD
Sbjct: 2 ETSSYLNVLVNSQ-----WKSRWCSVRDNHLHFYQDRN--RSKVAQQPLSLVGCEVVPDP 54
Query: 1040 NLSQGKFIIKLEVPAADGMSEMFLRCENEEQYASWMAA 1077
+ L L ++ E+ W+
Sbjct: 55 SPDHLYSFRILHKG----EELAKLEAKSSEEMGHWLGL 88
>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 132
Score = 31.6 bits (71), Expect = 0.20
Identities = 12/115 (10%), Positives = 34/115 (29%), Gaps = 5/115 (4%)
Query: 973 PDIMHVPELYDYLRCLKPKRFTMKAYKRLWVTCRELQLRFYKSREDAQHSSPINEFSLRG 1032
DI + + + + + +R + L + + + G
Sbjct: 20 DDIKTLGNVIFMSQVVMQHGACEEKEER-YFLLFSSVLIMLSASPRMSGFMYQGKIPIAG 78
Query: 1033 CEVTPDVNLSQGKFIIKLEVPAADGMSEMFLRCENEEQYASWMAACRLQLTENNS 1087
V + + ++ + + + C N + + WM +LT++
Sbjct: 79 MVVNRLDEIEGSDCMFEITGS---TVERIVVHCNNNQDFQEWMEQLN-RLTKSGP 129
>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 32.2 bits (72), Expect = 0.30
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 6/109 (5%)
Query: 544 DGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKN---TIVNSYNRNFTGRNDANPAT 600
+ +A L FG + CGP + K + E+ T +++++R + +
Sbjct: 167 ESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF 226
Query: 601 HAFVTSPELVTALAIKGTLAFDPRSDTLTGSDGKPF---KLRDPFGDEL 646
+PE V + + A P T P +L DP G
Sbjct: 227 REAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNY 275
>d2adza1 b.55.1.1 (A:1-43,A:117-178) Alpha-1-syntrophin {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 105
Score = 30.2 bits (68), Expect = 0.39
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 1017 EDAQHSSPINEF---SLRGCEVTPDVNLS--QGKFIIKLEVPAADGMSEMFLRCENEEQY 1071
EDA SP++E SL+ V+ + + ++ LE+ AADG +FLR ++E
Sbjct: 36 EDALTVSPLSEAKHVSLKMAYVSRRCTPTDPEPRY---LEICAADGQDAVFLRAKDEASA 92
Query: 1072 ASWMAA 1077
SW A
Sbjct: 93 RSWAGA 98
>d1ef1a3 d.15.1.4 (A:4-87) Moesin {Human (Homo sapiens) [TaxId:
9606]}
Length = 84
Score = 28.1 bits (63), Expect = 1.4
Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 891 WLDSSLSIYEQGVKEFDTLRLRF--KFY 916
WL + + Q V++ L +F KFY
Sbjct: 55 WLKLNKKVTAQDVRKESPLLFKFRAKFY 82
>d2gbsa1 b.122.1.8 (A:2-137) Hypothetical protein RPA0253
{Rhodopseudomonas palustris [TaxId: 1076]}
Length = 136
Score = 29.1 bits (65), Expect = 1.4
Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Query: 647 PTKGFDPGVDTYQPPPKDGSSLSVDVDPKS--QRLQLLEPFDVWDKKDIKDMVVL 699
G + P P D S V VD K+ + V + + DM ++
Sbjct: 58 EIVGIAEIIREAYPDPTDASGKFVCVDIKADKPLKTPVTLAAVKAEPRLADMALM 112
>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 260
Score = 29.5 bits (65), Expect = 1.9
Identities = 37/229 (16%), Positives = 75/229 (32%), Gaps = 19/229 (8%)
Query: 334 ATTSVFPYNKRINEYHGPGIDNISCTGMGTICNMGAEIGATTSVFPYNQRINIDNISCTG 393
AT ++E + + T G C +G E+ +++ + G
Sbjct: 41 ATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKG 100
Query: 394 MGTICNMGAEIGATTSVFPYNNRMYDFLKATLREDIAKEAMKYQSLLTPDEGAKYDQLIE 453
+ I I YDFL + ++ E + ++ ++ E
Sbjct: 101 VPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKE 160
Query: 454 L--DLNTLEPHVNGPFTPDLAHPINKLGEAAK---KNGWPMDIKVSLIGSCTNASYEDMS 508
+ + T E P D+ + + ++ + G N M
Sbjct: 161 VLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGND--ISML 218
Query: 509 RCASIAKEAMAHG---LKSSTPFNVTPGSEQIRATIERDGIAQTLREFG 554
R A+I AM +K++ + VT ++ DGI++ ++ FG
Sbjct: 219 RHAAIGV-AMGQAKEDVKAAADY-VTAPIDE-------DGISKAMKHFG 258
>d1h4ra3 d.15.1.4 (A:20-103) Merlin {Human (Homo sapiens) [TaxId:
9606]}
Length = 84
Score = 27.0 bits (60), Expect = 2.9
Identities = 7/28 (25%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 891 WLDSSLSIYEQGVKEFDTLRLRF--KFY 916
WL + + V + + + F KFY
Sbjct: 55 WLKMDKKVLDHDVSKEEPVTFHFLAKFY 82
>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO
{Human (Homo sapiens) [TaxId: 9606]}
Length = 121
Score = 27.6 bits (61), Expect = 3.5
Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 1026 NEFSLRGCEVTPDVNLSQGKFIIKLEVPAADGMSEMFLRCENEEQYASWMAACRLQLTE 1084
++ VT V KF + + +++ L+ + E W+ R + E
Sbjct: 62 SKLFTSELGVTEHVEGDPCKFALWVG-RTPTSDNKIVLKASSIENKQDWIKHIREVIQE 119
>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP
2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 378
Score = 28.4 bits (63), Expect = 5.9
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 828 DYDKIQPNDRISLVGLKDLAPGKPVTAQIKHADGKVEEIKLN 869
++ KIQ +V + + P A+ K+ K+ +KLN
Sbjct: 40 EWSKIQTPTDEIVVPYEKMTPVSQDVAETKNLLDKLVVLKLN 81
>g1w2w.1 c.124.1.5 (A:,B:) Putative methylthioribose-1-phosphate
isomerase Ypr118W {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 402
Score = 27.9 bits (61), Expect = 8.1
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 26/136 (19%)
Query: 489 MDIKVSLIGSCTNASYED---MSRCASIAKEAMAHGLK------SSTPFNVTPGSEQIRA 539
+ IK + +G+ D +A G+K +T NVT + I
Sbjct: 261 IPIKAAFVGADRIVRNGDTANKIGTLQLAVICKQFGIKFFVVAPKTTIDNVTETGDDI-- 318
Query: 540 TIE-RDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRNDANP 598
+E R+ + + GTV+ G I + + + + N NP
Sbjct: 319 IVEERN--PEEFKVVTGTVINPENGSLILNESGEPITGKVGIAPLEI--------NVWNP 368
Query: 599 ATHAF-VTSPELVTAL 613
A F +T EL+ +
Sbjct: 369 A---FDITPHELIDGI 381
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 366
Score = 27.6 bits (60), Expect = 9.5
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 15/82 (18%)
Query: 475 INKLGEAAKKNGWPM---DIKVSLIGSCTNASYEDMSRCASIAKEAMAHGLKSSTPFNVT 531
I + E P+ DIK+ +AS ED+ + +AK A A G FNVT
Sbjct: 295 IERYIELYLCLDLPVTLEDIKL------KDASREDILK---VAKAATAEGETIHNAFNVT 345
Query: 532 PGSEQIRATIER-DGIAQTLRE 552
+ + I D A+ +E
Sbjct: 346 A--DDVADAIFAADQYAKAYKE 365
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 27.4 bits (59), Expect = 9.7
Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 8/90 (8%)
Query: 541 IERDGIAQTLREFGGTVLANACGPCIGQWNRKDVKMGEKNTIVNSYNRNFTGRND----- 595
+ + + G+ A+ +G WN K + + + + +
Sbjct: 176 FDISPDSVKIETANGSYTADKLIVSMGAWNSKLLSKLNLDIPDEHFIIDLHPEHSNVVIA 235
Query: 596 ANPATHAFVTSP---ELVTALAIKGTLAFD 622
A + H F S E+++ LA+ G D
Sbjct: 236 AGFSGHGFKFSSGVGEVLSQLALTGKTEHD 265
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.133 0.397
Gapped
Lambda K H
0.267 0.0474 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,071,877
Number of extensions: 196395
Number of successful extensions: 524
Number of sequences better than 10.0: 1
Number of HSP's gapped: 496
Number of HSP's successfully gapped: 36
Length of query: 1087
Length of database: 2,407,596
Length adjustment: 95
Effective length of query: 992
Effective length of database: 1,103,246
Effective search space: 1094420032
Effective search space used: 1094420032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.7 bits)