Query psy3835
Match_columns 1659
No_of_seqs 898 out of 4918
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 18:38:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3835.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3835hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xkx_A Disks large homolog 4; 100.0 2.7E-78 9.4E-83 794.0 63.9 466 1139-1658 165-718 (721)
2 3shw_A Tight junction protein 100.0 3.1E-62 1.1E-66 596.3 31.9 377 1237-1658 2-383 (468)
3 3tsz_A Tight junction protein 100.0 1.7E-61 5.7E-66 586.4 31.8 375 1235-1657 8-390 (391)
4 3tvt_A Disks large 1 tumor sup 100.0 6.7E-60 2.3E-64 547.1 25.9 266 1331-1658 4-287 (292)
5 3kfv_A Tight junction protein 100.0 1.5E-54 5.3E-59 499.4 20.4 284 1330-1658 2-300 (308)
6 1kjw_A Postsynaptic density pr 100.0 1.1E-50 3.8E-55 473.8 27.8 274 1332-1658 1-292 (295)
7 4dey_A Voltage-dependent L-typ 100.0 2.3E-39 7.7E-44 372.8 16.0 259 1329-1648 35-321 (337)
8 1ex7_A Guanylate kinase; subst 100.0 9.8E-34 3.4E-38 307.3 20.3 166 1475-1649 2-186 (186)
9 3ney_A 55 kDa erythrocyte memb 100.0 1.6E-30 5.6E-35 283.7 17.3 164 1472-1655 17-197 (197)
10 2xkx_A Disks large homolog 4; 99.9 4E-25 1.4E-29 290.2 37.8 302 738-1214 70-395 (721)
11 3a00_A Guanylate kinase, GMP k 99.9 3.7E-22 1.3E-26 219.2 15.7 165 1474-1648 1-185 (186)
12 3tau_A Guanylate kinase, GMP k 99.9 4.8E-22 1.6E-26 222.3 16.5 169 1473-1651 7-192 (208)
13 3gsl_A Disks large homolog 4; 99.9 9E-21 3.1E-25 210.0 22.1 171 1128-1320 5-191 (196)
14 3r0h_A INAD, inactivation-NO-a 99.9 1.4E-20 4.8E-25 210.2 23.5 173 1125-1319 15-196 (206)
15 1kgd_A CASK, peripheral plasma 99.9 8.1E-21 2.8E-25 207.3 18.0 160 1472-1648 3-179 (180)
16 1s96_A Guanylate kinase, GMP k 99.8 9.9E-20 3.4E-24 204.0 21.2 170 1472-1651 14-201 (219)
17 3gsl_A Disks large homolog 4; 99.8 1.6E-20 5.5E-25 208.0 13.8 184 56-269 1-191 (196)
18 2qt5_A Glutamate receptor-inte 99.8 4E-19 1.4E-23 197.3 21.8 180 1127-1320 6-196 (200)
19 2qor_A Guanylate kinase; phosp 99.8 9.3E-19 3.2E-23 195.1 21.8 169 1472-1650 10-199 (204)
20 1p1d_A PDZ45, glutamate recept 99.8 1.4E-18 4.8E-23 192.2 22.5 176 1127-1319 5-195 (196)
21 1lvg_A Guanylate kinase, GMP k 99.8 3.1E-18 1E-22 189.7 18.7 165 1474-1648 4-188 (198)
22 3r0h_A INAD, inactivation-NO-a 99.8 2.4E-18 8.3E-23 192.0 17.6 156 738-894 29-198 (206)
23 1w9e_A Syntenin 1; cell adhesi 99.7 1.4E-16 4.6E-21 171.2 22.9 159 1128-1317 4-164 (166)
24 2qt5_A Glutamate receptor-inte 99.7 1.1E-16 3.6E-21 177.7 19.0 154 738-892 19-195 (200)
25 3suz_A Amyloid beta A4 precurs 99.7 1.5E-17 5.1E-22 202.3 5.1 162 1127-1318 203-373 (388)
26 1p1d_A PDZ45, glutamate recept 99.7 4.8E-16 1.6E-20 171.7 16.7 154 738-892 18-195 (196)
27 3tr0_A Guanylate kinase, GMP k 99.6 8.2E-15 2.8E-19 163.1 19.8 167 1473-1650 6-189 (205)
28 3lnc_A Guanylate kinase, GMP k 99.6 8.4E-15 2.9E-19 166.4 14.5 168 1473-1651 26-212 (231)
29 3rle_A Golgi reassembly-stacki 99.6 2.8E-14 9.7E-19 158.8 17.3 146 1149-1319 14-170 (209)
30 1z6g_A Guanylate kinase; struc 99.5 3.9E-13 1.3E-17 150.9 21.6 170 1472-1651 21-211 (218)
31 3suz_A Amyloid beta A4 precurs 99.5 5.8E-15 2E-19 179.5 5.6 147 738-891 216-373 (388)
32 4a8c_A Periplasmic PH-dependen 99.4 8.7E-13 3E-17 163.2 17.2 153 1150-1320 262-421 (436)
33 1w9e_A Syntenin 1; cell adhesi 99.4 1.1E-12 3.8E-17 140.7 15.6 143 738-889 16-163 (166)
34 3pv2_A DEGQ; trypsin fold, PDZ 99.4 1.6E-12 5.5E-17 161.0 17.2 154 1151-1319 282-443 (451)
35 1i84_S Smooth muscle myosin he 99.4 5.8E-13 2E-17 183.9 12.0 53 285-337 855-907 (1184)
36 2j41_A Guanylate kinase; GMP, 99.4 7.2E-12 2.5E-16 139.3 16.7 167 1473-1650 5-189 (207)
37 1i84_S Smooth muscle myosin he 99.3 7.8E-13 2.7E-17 182.6 7.9 42 297-338 860-901 (1184)
38 3gge_A PDZ domain-containing p 99.3 8E-12 2.7E-16 117.7 12.1 86 1126-1211 3-91 (95)
39 1r6j_A Syntenin 1; PDZ, membra 99.3 6.5E-12 2.2E-16 116.3 10.7 80 1234-1318 2-81 (82)
40 1r6j_A Syntenin 1; PDZ, membra 99.3 1E-11 3.5E-16 115.0 11.5 76 1128-1208 4-80 (82)
41 3rle_A Golgi reassembly-stacki 99.3 2.4E-11 8.1E-16 135.2 13.1 147 739-892 3-170 (209)
42 2he4_A Na(+)/H(+) exchange reg 99.2 4.9E-11 1.7E-15 113.8 12.7 84 1128-1211 4-88 (90)
43 1d5g_A Human phosphatase HPTP1 99.2 5.2E-11 1.8E-15 115.1 12.7 86 1126-1211 3-94 (96)
44 1m5z_A GRIP, AMPA receptor int 99.2 6.5E-11 2.2E-15 113.2 13.2 86 1125-1210 3-91 (91)
45 3i4w_A Disks large homolog 4; 99.2 4.9E-11 1.7E-15 117.1 12.1 90 1124-1213 7-98 (104)
46 2opg_A Multiple PDZ domain pro 99.2 7.7E-11 2.6E-15 114.4 13.2 86 1127-1212 3-92 (98)
47 2iwo_A Multiple PDZ domain pro 99.2 3.5E-11 1.2E-15 121.2 11.0 88 1124-1211 20-114 (120)
48 2awx_A Synapse associated prot 99.2 6.5E-11 2.2E-15 116.4 12.3 85 1127-1211 2-94 (105)
49 1uhp_A Hypothetical protein KI 99.2 7.3E-11 2.5E-15 116.5 12.5 86 1126-1211 6-102 (107)
50 2dlu_A INAD-like protein; PDZ 99.2 1.2E-10 4.1E-15 115.8 13.8 87 1126-1212 13-100 (111)
51 2d92_A INAD-like protein; PDZ 99.2 8.9E-11 3E-15 116.1 12.8 86 1126-1211 13-106 (108)
52 1kwa_A Hcask/LIN-2 protein; PD 99.2 5.3E-11 1.8E-15 112.9 10.5 83 1237-1319 2-85 (88)
53 1i16_A Interleukin 16, LCF; cy 99.2 6.4E-11 2.2E-15 121.1 11.8 87 1125-1211 26-119 (130)
54 2fe5_A Presynaptic protein SAP 99.2 1E-10 3.5E-15 112.5 12.6 83 1128-1210 3-93 (94)
55 2csj_A TJP2 protein; PDZ domai 99.2 2.3E-11 7.9E-16 122.2 8.2 93 55-160 9-104 (117)
56 2jik_A Synaptojanin-2 binding 99.2 7.8E-11 2.7E-15 115.0 11.8 85 1127-1211 6-98 (101)
57 1g9o_A NHE-RF; PDZ domain, com 99.2 1.1E-10 3.6E-15 111.7 12.4 82 1128-1209 3-85 (91)
58 2eno_A Synaptojanin-2-binding 99.2 7.5E-11 2.6E-15 119.0 11.9 92 1120-1211 9-108 (120)
59 2i1n_A Discs, large homolog 3; 99.2 2.4E-11 8.3E-16 118.9 7.8 89 58-160 2-94 (102)
60 3gge_A PDZ domain-containing p 99.2 7.9E-11 2.7E-15 111.0 10.9 83 1236-1319 5-90 (95)
61 1kwa_A Hcask/LIN-2 protein; PD 99.2 7.9E-11 2.7E-15 111.7 11.1 83 1129-1211 2-86 (88)
62 1um1_A KIAA1849 protein, RSGI 99.2 1.3E-10 4.6E-15 115.2 13.1 89 1124-1212 4-98 (110)
63 2fne_A Multiple PDZ domain pro 99.2 6.8E-11 2.3E-15 118.5 11.1 86 1126-1211 23-114 (117)
64 2dkr_A LIN-7 homolog B; LIN-7B 99.2 7.4E-11 2.5E-15 113.3 10.9 85 1127-1211 4-91 (93)
65 2i1n_A Discs, large homolog 3; 99.2 1.1E-10 3.8E-15 114.2 12.3 84 1128-1211 4-95 (102)
66 3r68_A Na(+)/H(+) exchange reg 99.2 9E-11 3.1E-15 113.2 11.2 85 1127-1211 4-89 (95)
67 2vwr_A Ligand of NUMB protein 99.2 1.5E-10 5.2E-15 111.6 12.7 84 1128-1211 3-90 (95)
68 4e34_A Golgi-associated PDZ an 99.2 1.2E-10 4E-15 110.3 11.7 82 1127-1208 1-86 (87)
69 2byg_A Channel associated prot 99.2 7.8E-11 2.7E-15 118.1 10.8 85 1127-1211 23-115 (117)
70 1ueq_A Membrane associated gua 99.2 3.4E-10 1.1E-14 114.7 15.6 87 1125-1211 16-107 (123)
71 2vsp_A PDZ domain-containing p 99.2 3.1E-11 1.1E-15 115.4 7.5 85 1127-1211 2-87 (91)
72 2jil_A GRIP1 protein, glutamat 99.2 1.3E-10 4.5E-15 112.5 11.9 84 1128-1211 3-93 (97)
73 1qav_A Alpha-1 syntrophin (res 99.2 1.4E-10 4.9E-15 110.5 11.9 82 1127-1208 3-88 (90)
74 2v90_A PDZ domain-containing p 99.2 1.4E-10 4.6E-15 112.2 11.8 84 1128-1211 3-90 (96)
75 1uit_A Human discs large 5 pro 99.2 2.6E-10 8.8E-15 114.5 14.3 91 1124-1214 15-105 (117)
76 3l4f_D SH3 and multiple ankyri 99.2 1.5E-10 5.1E-15 118.6 12.7 86 1126-1211 25-125 (132)
77 3b76_A E3 ubiquitin-protein li 99.2 1E-10 3.5E-15 117.2 10.9 85 1126-1210 22-113 (118)
78 1wha_A KIAA0147 protein, scrib 99.2 1.1E-10 3.8E-15 114.8 10.9 85 1127-1211 6-99 (105)
79 1wi4_A Synip, syntaxin binding 99.2 2.3E-10 8E-15 113.1 13.2 86 1125-1211 12-106 (109)
80 1ujd_A KIAA0559 protein; PDZ d 99.2 1.6E-10 5.3E-15 116.0 12.1 87 1126-1212 10-111 (117)
81 1wf8_A Neurabin-I; PDZ domain, 99.2 1.3E-10 4.6E-15 114.6 11.5 86 1126-1211 7-101 (107)
82 3axa_A Afadin, nectin-3, prote 99.2 1.8E-10 6.1E-15 113.5 12.3 87 1126-1213 9-101 (106)
83 2ehr_A INAD-like protein; PDZ 99.1 2E-10 7E-15 115.3 12.9 90 1231-1320 10-111 (117)
84 2daz_A INAD-like protein; PDZ 99.1 1.9E-10 6.6E-15 116.6 12.8 89 1126-1214 23-115 (124)
85 2ejy_A 55 kDa erythrocyte memb 99.1 9.2E-11 3.2E-15 112.8 9.6 84 1235-1318 11-95 (97)
86 2uzc_A Human pdlim5, PDZ and L 99.1 2E-10 6.8E-15 109.0 11.9 82 1128-1210 3-86 (88)
87 1q7x_A PDZ2B domain of PTP-BAS 99.1 1.2E-10 4.1E-15 115.2 10.7 87 1125-1211 6-103 (108)
88 2r4h_A Membrane-associated gua 99.1 1.8E-10 6.2E-15 114.6 12.0 87 1125-1211 21-110 (112)
89 2f5y_A Regulator of G-protein 99.1 1.7E-10 5.8E-15 110.2 11.3 82 1128-1211 3-84 (91)
90 1wi2_A Riken cDNA 2700099C19; 99.1 2.9E-10 9.8E-15 111.6 13.0 85 1126-1211 13-100 (104)
91 2ejy_A 55 kDa erythrocyte memb 99.1 1.6E-10 5.3E-15 111.3 10.7 82 1128-1209 12-95 (97)
92 2djt_A Unnamed protein product 99.1 1.9E-10 6.4E-15 112.9 11.6 87 1125-1211 8-99 (104)
93 2dc2_A GOPC, golgi associated 99.1 2.1E-10 7.1E-15 112.3 11.9 86 1126-1211 7-96 (103)
94 1x5q_A LAP4 protein; PDZ domai 99.1 4.7E-10 1.6E-14 111.3 14.6 87 1125-1211 12-106 (110)
95 2dls_A PDZ-rhogef, RHO guanine 99.1 2.8E-10 9.5E-15 109.2 12.4 84 1125-1211 5-88 (93)
96 3i4w_A Disks large homolog 4; 99.1 1.6E-10 5.4E-15 113.5 10.9 91 1234-1325 9-101 (104)
97 3o46_A Maguk P55 subfamily mem 99.1 2.3E-10 7.9E-15 109.8 11.8 84 1128-1211 4-89 (93)
98 2eei_A PDZ domain-containing p 99.1 8.5E-11 2.9E-15 115.8 8.9 87 1125-1211 5-92 (106)
99 1ihj_A INAD; intermolecular di 99.1 2.9E-10 1E-14 110.2 12.6 83 1128-1210 5-97 (98)
100 2q9v_A Membrane-associated gua 99.1 1.6E-10 5.6E-15 110.1 10.6 82 1128-1209 2-88 (90)
101 1n7e_A AMPA receptor interacti 99.1 2.8E-10 9.6E-15 110.1 12.4 85 1127-1211 4-91 (97)
102 2qg1_A Multiple PDZ domain pro 99.1 2.7E-10 9.2E-15 109.1 11.9 84 1127-1210 3-89 (92)
103 2d90_A PDZ domain containing p 99.1 1.9E-10 6.4E-15 112.5 10.9 85 1127-1211 5-90 (102)
104 1tp5_A Presynaptic density pro 99.1 1.9E-10 6.4E-15 115.9 11.1 90 1125-1214 11-102 (119)
105 2iwo_A Multiple PDZ domain pro 99.1 1.1E-10 3.8E-15 117.5 9.4 88 1233-1320 21-114 (120)
106 2he4_A Na(+)/H(+) exchange reg 99.1 3.5E-10 1.2E-14 107.8 12.3 85 1234-1319 2-87 (90)
107 2db5_A INAD-like protein; PDZ 99.1 2.4E-10 8.1E-15 116.8 11.9 86 1126-1211 23-116 (128)
108 1wg6_A Hypothetical protein (r 99.1 2.9E-10 1E-14 115.7 12.4 82 1130-1211 27-123 (127)
109 3qe1_A Sorting nexin-27, G pro 99.1 3.2E-10 1.1E-14 111.9 12.3 85 1127-1211 5-103 (107)
110 2ehr_A INAD-like protein; PDZ 99.1 2.8E-10 9.6E-15 114.3 12.1 86 1126-1211 13-111 (117)
111 2w4f_A Protein LAP4; structura 99.1 3.7E-10 1.3E-14 109.3 12.5 84 1128-1211 3-94 (97)
112 2i04_A Membrane-associated gua 99.1 3.5E-10 1.2E-14 106.6 11.8 79 1130-1208 2-85 (85)
113 1v62_A KIAA1719 protein; struc 99.1 4.9E-10 1.7E-14 112.3 13.6 85 1127-1211 14-103 (117)
114 2q3g_A PDZ and LIM domain prot 99.1 2.9E-10 1E-14 108.1 11.3 82 1129-1211 4-87 (89)
115 3b76_A E3 ubiquitin-protein li 99.1 2E-10 6.8E-15 115.1 10.6 86 1234-1319 22-113 (118)
116 1ky9_A Protease DO, DEGP, HTRA 99.1 1.4E-11 4.7E-16 152.5 2.6 153 1150-1319 285-440 (448)
117 1rgw_A ZAsp protein; PDZ, cyph 99.1 2E-10 7E-15 108.2 9.8 81 1129-1210 2-84 (85)
118 2ego_A General receptor for ph 99.1 4.7E-10 1.6E-14 108.3 12.6 83 1127-1209 3-95 (96)
119 1qav_A Alpha-1 syntrophin (res 99.1 3.2E-10 1.1E-14 108.1 11.1 83 1235-1317 3-88 (90)
120 3cbz_A Dishevelled-2; PDZ doma 99.1 2.2E-10 7.7E-15 113.1 10.3 85 1127-1211 4-97 (108)
121 1uep_A Membrane associated gua 99.1 1.8E-10 6E-15 112.9 9.3 86 1126-1211 7-97 (103)
122 2kv8_A RGS12, regulator of G-p 99.1 8.5E-11 2.9E-15 110.2 6.6 81 1128-1210 2-82 (83)
123 2dm8_A INAD-like protein; PDZ 99.1 3.7E-10 1.3E-14 113.2 11.6 88 1126-1213 15-106 (116)
124 2ego_A General receptor for ph 99.1 3.8E-10 1.3E-14 109.0 11.1 85 1234-1318 2-95 (96)
125 4e34_A Golgi-associated PDZ an 99.1 3.4E-10 1.2E-14 107.1 10.5 82 1236-1317 2-86 (87)
126 3soe_A Membrane-associated gua 99.1 5.2E-10 1.8E-14 109.8 12.1 82 1127-1211 11-94 (113)
127 3nfk_A Tyrosine-protein phosph 99.1 3.2E-10 1.1E-14 111.9 10.7 84 1126-1209 15-107 (107)
128 2g5m_B Neurabin-2; spinophilin 99.1 2.4E-10 8E-15 114.1 9.7 85 1128-1212 4-97 (113)
129 1nf3_C PAR-6B; semi-CRIB motif 99.1 4E-10 1.4E-14 115.0 11.6 87 1125-1211 26-126 (128)
130 3l4f_D SH3 and multiple ankyri 99.1 4.6E-10 1.6E-14 115.0 11.9 86 1234-1319 25-124 (132)
131 2eeg_A PDZ and LIM domain prot 99.1 3.3E-10 1.1E-14 109.0 10.2 83 1128-1211 8-92 (94)
132 2jre_A C60-1 PDZ domain peptid 99.1 5.5E-10 1.9E-14 110.4 12.1 87 1125-1211 9-105 (108)
133 3egg_C Spinophilin; PP1, serin 99.1 4.3E-10 1.5E-14 120.0 12.1 83 1127-1209 79-170 (170)
134 3bpu_A Membrane-associated gua 99.1 4.5E-10 1.5E-14 106.6 10.9 82 1128-1211 3-87 (88)
135 2pa1_A PDZ and LIM domain prot 99.1 5.9E-10 2E-14 105.5 11.6 76 1136-1211 9-86 (87)
136 2kpk_A Membrane-associated gua 99.1 7.8E-10 2.7E-14 113.0 13.4 87 1125-1211 15-106 (129)
137 2koj_A Partitioning defective 99.1 9.7E-10 3.3E-14 109.2 13.7 88 1126-1213 9-104 (111)
138 2qkv_A Inactivation-NO-after-p 99.1 7.7E-10 2.6E-14 106.8 12.5 85 1125-1210 5-91 (96)
139 3e17_A Tight junction protein 99.1 3.4E-10 1.2E-14 107.3 9.6 73 820-893 10-82 (88)
140 1va8_A Maguk P55 subfamily mem 99.1 9E-10 3.1E-14 109.7 13.2 84 1127-1211 24-109 (113)
141 2o2t_A Multiple PDZ domain pro 99.1 3.2E-10 1.1E-14 113.9 10.0 85 1127-1211 19-111 (117)
142 2pkt_A PDZ and LIM domain prot 99.1 7.5E-10 2.6E-14 105.7 12.1 82 1129-1211 4-87 (91)
143 2dc2_A GOPC, golgi associated 99.1 3.9E-10 1.3E-14 110.4 10.2 87 1234-1320 7-96 (103)
144 3ngh_A PDZ domain-containing p 99.1 3.3E-10 1.1E-14 111.6 9.7 83 1129-1211 2-86 (106)
145 3cbz_A Dishevelled-2; PDZ doma 99.1 2.3E-10 7.9E-15 113.0 8.5 85 1235-1319 4-96 (108)
146 1g9o_A NHE-RF; PDZ domain, com 99.1 8.9E-10 3E-14 105.2 12.2 82 1236-1318 3-85 (91)
147 1m5z_A GRIP, AMPA receptor int 99.1 8.2E-10 2.8E-14 105.5 11.9 83 1236-1318 6-90 (91)
148 4amh_A Disks large homolog 1; 99.1 5.6E-10 1.9E-14 109.8 10.8 78 1134-1211 8-93 (106)
149 1wf7_A Enigma homologue protei 99.1 5.3E-10 1.8E-14 109.5 10.6 86 1126-1212 3-90 (103)
150 1q3o_A Shank1; PDZ, GKAP, pept 99.0 9.1E-10 3.1E-14 109.0 12.3 84 1128-1211 7-105 (109)
151 2csj_A TJP2 protein; PDZ domai 99.0 4.8E-10 1.6E-14 112.6 10.4 84 1127-1211 13-105 (117)
152 1um7_A Synapse-associated prot 99.0 1.9E-10 6.5E-15 114.8 7.4 91 1126-1216 13-105 (113)
153 1mfg_A ERB-B2 interacting prot 99.0 9.9E-10 3.4E-14 105.8 12.2 81 1129-1211 4-94 (95)
154 2yt7_A Amyloid beta A4 precurs 99.0 1.2E-09 4E-14 106.5 12.7 86 1126-1211 7-100 (101)
155 1wi2_A Riken cDNA 2700099C19; 99.0 9.3E-10 3.2E-14 107.9 11.9 86 1234-1320 13-100 (104)
156 2cs5_A Tyrosine-protein phosph 99.0 7.8E-10 2.7E-14 111.3 11.7 86 1126-1211 13-107 (119)
157 2dmz_A INAD-like protein; PDZ 99.0 9.8E-10 3.4E-14 112.3 12.5 87 1125-1211 12-107 (129)
158 3khf_A Microtubule-associated 99.0 5.9E-10 2E-14 108.3 10.3 81 1131-1211 5-94 (99)
159 2vsp_A PDZ domain-containing p 99.0 3.5E-10 1.2E-14 108.1 8.5 84 1235-1319 2-86 (91)
160 1ujd_A KIAA0559 protein; PDZ d 99.0 6.5E-10 2.2E-14 111.5 10.9 87 1236-1322 12-112 (117)
161 1ufx_A KIAA1526 protein; PDZ d 99.0 6.4E-10 2.2E-14 108.7 10.5 84 1128-1211 6-98 (103)
162 1v62_A KIAA1719 protein; struc 99.0 8.3E-10 2.8E-14 110.7 11.5 87 1234-1320 13-103 (117)
163 1uju_A Scribble; PDZ domain, c 99.0 2.1E-10 7.2E-15 114.0 7.1 86 1126-1211 7-105 (111)
164 2qg1_A Multiple PDZ domain pro 99.0 7.4E-10 2.5E-14 106.0 10.6 84 1236-1319 4-89 (92)
165 2jre_A C60-1 PDZ domain peptid 99.0 3.4E-10 1.2E-14 111.9 8.4 96 53-160 5-104 (108)
166 2opg_A Multiple PDZ domain pro 99.0 1E-09 3.5E-14 106.4 11.4 84 1237-1321 5-92 (98)
167 2h2b_A Tight junction protein 99.0 1.2E-09 4.3E-14 107.6 12.2 84 1127-1211 6-98 (107)
168 2v90_A PDZ domain-containing p 99.0 9.6E-10 3.3E-14 106.1 11.0 84 1235-1319 2-89 (96)
169 1d5g_A Human phosphatase HPTP1 99.0 1.4E-09 4.9E-14 104.9 12.2 84 1235-1319 4-93 (96)
170 2h2b_A Tight junction protein 99.0 1.1E-09 3.8E-14 108.0 11.6 83 1236-1319 7-97 (107)
171 2byg_A Channel associated prot 99.0 9.8E-10 3.4E-14 110.1 11.4 84 1236-1320 24-115 (117)
172 2db5_A INAD-like protein; PDZ 99.0 5.5E-10 1.9E-14 114.0 9.7 87 1234-1320 23-116 (128)
173 2fne_A Multiple PDZ domain pro 99.0 4.7E-10 1.6E-14 112.4 9.0 85 1234-1319 23-113 (117)
174 3hpk_A Protein interacting wit 99.0 1.4E-09 4.7E-14 110.6 12.6 85 1127-1211 18-106 (125)
175 2la8_A Inactivation-NO-after-p 99.0 9.1E-10 3.1E-14 108.2 10.8 82 1129-1211 3-86 (106)
176 2awx_A Synapse associated prot 99.0 1E-09 3.4E-14 107.9 11.1 83 1237-1320 4-94 (105)
177 4a8c_A Periplasmic PH-dependen 99.0 1.3E-09 4.4E-14 134.8 14.6 130 755-892 267-420 (436)
178 2vwr_A Ligand of NUMB protein 99.0 1.2E-09 4E-14 105.3 11.3 83 1238-1320 5-90 (95)
179 3ngh_A PDZ domain-containing p 99.0 7.5E-10 2.6E-14 109.0 10.1 85 1236-1320 1-86 (106)
180 2pa1_A PDZ and LIM domain prot 99.0 1.1E-09 3.9E-14 103.5 10.9 80 1240-1319 4-85 (87)
181 1wfv_A Membrane associated gua 99.0 3.7E-10 1.3E-14 110.6 7.7 86 1126-1211 9-97 (103)
182 2dlu_A INAD-like protein; PDZ 99.0 1.2E-09 4.2E-14 108.4 11.6 88 1233-1321 12-100 (111)
183 1uew_A Membrane associated gua 99.0 1.4E-09 4.9E-14 108.5 12.0 86 1126-1211 8-104 (114)
184 2jik_A Synaptojanin-2 binding 99.0 1.2E-09 4.1E-14 106.5 11.3 84 1235-1319 6-97 (101)
185 2fe5_A Presynaptic protein SAP 99.0 1.4E-09 4.9E-14 104.5 11.6 82 1236-1318 3-92 (94)
186 2dkr_A LIN-7 homolog B; LIN-7B 99.0 9.3E-10 3.2E-14 105.5 10.1 84 1235-1319 4-90 (93)
187 1ihj_A INAD; intermolecular di 99.0 7.8E-10 2.7E-14 107.2 9.7 83 1237-1319 6-97 (98)
188 3nfk_A Tyrosine-protein phosph 99.0 9.4E-10 3.2E-14 108.5 10.4 85 1234-1318 15-107 (107)
189 3r68_A Na(+)/H(+) exchange reg 99.0 1.2E-09 4.3E-14 105.1 10.9 83 1235-1318 4-87 (95)
190 2d92_A INAD-like protein; PDZ 99.0 1.3E-09 4.3E-14 107.8 11.2 84 1235-1319 14-105 (108)
191 3pv2_A DEGQ; trypsin fold, PDZ 99.0 7.3E-10 2.5E-14 137.2 11.7 128 755-892 286-443 (451)
192 3axa_A Afadin, nectin-3, prote 99.0 1.2E-09 4.1E-14 107.5 10.9 85 1237-1323 12-102 (106)
193 1n7t_A 99-MER peptide of densi 99.0 1.3E-09 4.5E-14 106.7 11.0 83 1126-1210 9-101 (103)
194 1wha_A KIAA0147 protein, scrib 99.0 1.2E-09 4.2E-14 107.2 10.8 84 1236-1320 7-99 (105)
195 2f5y_A Regulator of G-protein 99.0 1.3E-09 4.5E-14 104.1 10.7 82 1236-1320 3-84 (91)
196 2kom_A Partitioning defective 99.0 3E-09 1E-13 107.3 13.8 86 1125-1210 27-120 (121)
197 1uhp_A Hypothetical protein KI 99.0 1.3E-09 4.3E-14 107.6 10.8 84 1235-1319 7-101 (107)
198 2iwn_A Multiple PDZ domain pro 99.0 1.5E-09 5E-14 105.0 11.1 84 1128-1211 4-94 (97)
199 2fcf_A Multiple PDZ domain pro 99.0 1.8E-09 6.2E-14 105.7 11.8 84 1128-1211 4-100 (103)
200 4amh_A Disks large homolog 1; 99.0 1.1E-09 3.9E-14 107.6 10.3 77 1244-1320 9-93 (106)
201 3o46_A Maguk P55 subfamily mem 99.0 1.4E-09 4.7E-14 104.4 10.6 83 1236-1319 4-88 (93)
202 2jxo_A Ezrin-radixin-moesin-bi 99.0 1.3E-09 4.6E-14 105.5 10.6 85 1127-1211 8-94 (98)
203 2kv8_A RGS12, regulator of G-p 99.0 6.6E-10 2.3E-14 104.1 8.1 81 1236-1319 2-82 (83)
204 1whd_A RGS3, regulator of G-pr 99.0 8.4E-10 2.9E-14 107.4 9.1 85 1125-1211 12-96 (100)
205 2la8_A Inactivation-NO-after-p 99.0 1.4E-09 4.7E-14 106.8 10.6 80 1238-1318 4-84 (106)
206 1uju_A Scribble; PDZ domain, c 99.0 5.3E-10 1.8E-14 111.1 7.8 87 1234-1320 7-105 (111)
207 2o2t_A Multiple PDZ domain pro 99.0 6.8E-10 2.3E-14 111.4 8.6 86 1235-1320 19-111 (117)
208 1x6d_A Interleukin-16; PDZ dom 99.0 2.2E-09 7.5E-14 108.0 12.3 87 1125-1211 12-104 (119)
209 2qkv_A Inactivation-NO-after-p 99.0 2.1E-09 7.1E-14 103.7 11.5 83 1235-1318 7-90 (96)
210 2yt7_A Amyloid beta A4 precurs 99.0 2.1E-09 7.3E-14 104.7 11.7 86 1234-1319 7-99 (101)
211 1i16_A Interleukin 16, LCF; cy 99.0 1.6E-09 5.3E-14 110.8 11.2 84 1235-1319 28-118 (130)
212 1z87_A Alpha-1-syntrophin; pro 99.0 1E-09 3.4E-14 124.7 10.6 88 1125-1212 74-165 (263)
213 1wfg_A Regulating synaptic mem 99.0 2E-09 6.7E-14 110.1 11.8 74 1138-1211 47-128 (131)
214 1tp5_A Presynaptic density pro 99.0 1.6E-09 5.3E-14 109.2 10.8 91 1234-1325 12-104 (119)
215 1q3o_A Shank1; PDZ, GKAP, pept 99.0 1.9E-09 6.4E-14 106.7 11.1 83 1236-1318 7-103 (109)
216 3kzd_A TIAM-1, T-lymphoma inva 99.0 2.8E-09 9.6E-14 101.1 11.6 81 1128-1210 6-92 (94)
217 1n7e_A AMPA receptor interacti 99.0 2.4E-09 8.3E-14 103.5 11.5 83 1237-1320 6-91 (97)
218 1wi4_A Synip, syntaxin binding 99.0 2.2E-09 7.5E-14 106.1 11.3 85 1233-1319 12-105 (109)
219 2fcf_A Multiple PDZ domain pro 99.0 2.6E-09 9E-14 104.5 11.8 84 1236-1319 4-99 (103)
220 2eeh_A PDZ domain-containing p 99.0 2.9E-09 1E-13 103.6 12.1 84 1127-1211 9-95 (100)
221 2q3g_A PDZ and LIM domain prot 99.0 1.7E-09 6E-14 102.7 10.1 78 1240-1319 7-86 (89)
222 1v6b_A Harmonin isoform A1; st 99.0 2.4E-09 8.1E-14 107.5 11.6 83 1128-1211 18-108 (118)
223 1uit_A Human discs large 5 pro 99.0 2.4E-09 8.2E-14 107.4 11.6 89 1235-1324 18-106 (117)
224 1v5q_A GRIP1 homolog, glutamat 99.0 3.8E-09 1.3E-13 106.7 13.1 87 1125-1211 12-108 (122)
225 2r4h_A Membrane-associated gua 99.0 2.4E-09 8.3E-14 106.4 11.5 84 1235-1319 23-109 (112)
226 1uew_A Membrane associated gua 99.0 3.2E-09 1.1E-13 106.0 12.3 87 1234-1320 8-104 (114)
227 1nf3_C PAR-6B; semi-CRIB motif 99.0 1.6E-09 5.5E-14 110.5 10.3 87 1233-1319 26-125 (128)
228 2edz_A PDZ domain-containing p 99.0 2.1E-09 7.2E-14 107.3 11.0 84 1128-1211 13-98 (114)
229 2vsv_A Rhophilin-2; scaffold p 99.0 1.9E-09 6.5E-14 106.1 10.4 82 1128-1211 23-105 (109)
230 2e7k_A Maguk P55 subfamily mem 99.0 1.2E-09 4.2E-14 104.1 8.9 82 1127-1210 5-88 (91)
231 3tsv_A Tight junction protein 99.0 1.5E-09 5.1E-14 109.9 9.8 89 1235-1325 28-118 (124)
232 3egg_C Spinophilin; PP1, serin 99.0 1.3E-09 4.5E-14 116.2 9.9 71 820-891 88-170 (170)
233 2yuy_A RHO GTPase activating p 99.0 2.8E-10 9.5E-15 115.8 4.3 86 1126-1211 6-121 (126)
234 3k1r_A Harmonin; protein-prote 98.9 2.5E-09 8.4E-14 117.3 12.0 84 1127-1211 83-169 (192)
235 2d90_A PDZ domain containing p 98.9 2.9E-09 1E-13 103.9 11.3 85 1234-1319 4-89 (102)
236 1z87_A Alpha-1-syntrophin; pro 98.9 1.8E-09 6E-14 122.7 10.9 87 1234-1320 75-164 (263)
237 2edv_A FERM and PDZ domain-con 98.9 7.4E-10 2.5E-14 106.9 6.7 81 1127-1210 7-89 (96)
238 3tsv_A Tight junction protein 98.9 2E-09 6.9E-14 108.9 10.2 84 1130-1214 31-116 (124)
239 2e7k_A Maguk P55 subfamily mem 98.9 1.6E-09 5.6E-14 103.3 9.0 82 1235-1318 5-87 (91)
240 1ujv_A Membrane associated gua 98.9 7.4E-09 2.5E-13 99.8 13.7 84 1125-1211 7-92 (96)
241 2iwq_A Multiple PDZ domain pro 98.9 3.4E-09 1.2E-13 107.0 11.8 84 1128-1211 24-120 (123)
242 2jil_A GRIP1 protein, glutamat 98.9 2.2E-09 7.6E-14 103.8 10.0 82 1238-1320 5-93 (97)
243 2w4f_A Protein LAP4; structura 98.9 3.5E-09 1.2E-13 102.4 11.4 82 1238-1320 5-94 (97)
244 1rgw_A ZAsp protein; PDZ, cyph 98.9 2.3E-09 8E-14 100.9 9.9 78 1239-1318 4-83 (85)
245 1x5q_A LAP4 protein; PDZ domai 98.9 5.4E-09 1.8E-13 103.6 12.9 84 1236-1320 15-106 (110)
246 2daz_A INAD-like protein; PDZ 98.9 2E-09 6.9E-14 109.1 10.0 88 1235-1323 24-115 (124)
247 2pkt_A PDZ and LIM domain prot 98.9 3E-09 1E-13 101.5 10.6 80 1239-1320 6-87 (91)
248 1va8_A Maguk P55 subfamily mem 98.9 2.6E-09 9E-14 106.3 10.6 84 1236-1320 25-109 (113)
249 1x6d_A Interleukin-16; PDZ dom 98.9 2.1E-09 7.2E-14 108.2 10.0 87 1234-1320 13-104 (119)
250 1um1_A KIAA1849 protein, RSGI 98.9 3.5E-09 1.2E-13 104.9 11.4 85 1235-1320 7-97 (110)
251 2uzc_A Human pdlim5, PDZ and L 98.9 3.3E-09 1.1E-13 100.5 10.8 80 1238-1319 5-86 (88)
252 2dls_A PDZ-rhogef, RHO guanine 98.9 4.9E-09 1.7E-13 100.5 12.0 82 1234-1319 6-87 (93)
253 3qe1_A Sorting nexin-27, G pro 98.9 3.5E-09 1.2E-13 104.4 11.2 85 1234-1319 4-102 (107)
254 1uez_A KIAA1526 protein; PDZ d 98.9 1.6E-09 5.4E-14 105.7 8.5 86 1125-1211 5-94 (101)
255 2djt_A Unnamed protein product 98.9 2.9E-09 1E-13 104.4 10.5 86 1234-1320 9-99 (104)
256 1um7_A Synapse-associated prot 98.9 1.6E-09 5.4E-14 108.0 8.6 91 1234-1325 13-105 (113)
257 3e17_A Tight junction protein 98.9 3.9E-09 1.3E-13 100.0 10.9 77 1131-1211 3-82 (88)
258 3hpk_A Protein interacting wit 98.9 3E-09 1E-13 108.1 10.7 83 1236-1318 19-104 (125)
259 2eno_A Synaptojanin-2-binding 98.9 3.4E-09 1.2E-13 106.8 11.0 85 1235-1320 16-108 (120)
260 2q9v_A Membrane-associated gua 98.9 1.9E-09 6.7E-14 102.6 8.6 81 1237-1318 3-88 (90)
261 2dm8_A INAD-like protein; PDZ 98.9 4.5E-09 1.5E-13 105.3 11.7 88 1235-1323 16-107 (116)
262 4fln_A Protease DO-like 2, chl 98.9 9.5E-09 3.2E-13 128.0 17.0 151 1150-1301 276-456 (539)
263 2edp_A Fragment, shroom family 98.9 2.5E-09 8.7E-14 104.0 9.5 85 1126-1211 7-95 (100)
264 1mfg_A ERB-B2 interacting prot 98.9 4.1E-09 1.4E-13 101.4 10.7 78 1239-1319 6-93 (95)
265 1vb7_A PDZ and LIM domain 2; P 98.9 1.9E-09 6.6E-14 103.5 8.3 76 1136-1211 13-90 (94)
266 1wf8_A Neurabin-I; PDZ domain, 98.9 2.4E-09 8.1E-14 105.6 9.1 82 1237-1319 10-100 (107)
267 2cs5_A Tyrosine-protein phosph 98.9 2.6E-09 8.9E-14 107.5 9.6 85 1235-1319 14-106 (119)
268 2d8i_A T-cell lymphoma invasio 98.9 5.9E-09 2E-13 103.5 11.8 86 1125-1212 12-103 (114)
269 2iwq_A Multiple PDZ domain pro 98.9 4.3E-09 1.5E-13 106.3 11.1 86 1234-1319 22-119 (123)
270 3shw_A Tight junction protein 98.9 4.6E-09 1.6E-13 128.6 13.4 86 1129-1215 2-89 (468)
271 2z17_A Pleckstrin homology SEC 98.9 3.6E-09 1.2E-13 103.7 9.9 79 1128-1206 15-103 (104)
272 2gzv_A PRKCA-binding protein; 98.9 7.5E-09 2.6E-13 103.1 12.3 83 1127-1209 23-109 (114)
273 2eeh_A PDZ domain-containing p 98.9 5.8E-09 2E-13 101.5 11.1 85 1235-1320 9-95 (100)
274 2eei_A PDZ domain-containing p 98.9 2.3E-09 7.9E-14 105.5 8.1 85 1234-1319 6-91 (106)
275 2eeg_A PDZ and LIM domain prot 98.9 5E-09 1.7E-13 100.6 10.3 82 1236-1319 8-91 (94)
276 2i04_A Membrane-associated gua 98.9 7.6E-09 2.6E-13 97.3 11.3 78 1239-1317 3-85 (85)
277 1wfg_A Regulating synaptic mem 98.9 1.9E-09 6.5E-14 110.3 7.6 77 1243-1319 43-127 (131)
278 2dmz_A INAD-like protein; PDZ 98.9 4.4E-09 1.5E-13 107.5 10.2 86 1235-1320 14-107 (129)
279 1v6b_A Harmonin isoform A1; st 98.9 3.6E-09 1.2E-13 106.2 9.3 73 820-893 25-108 (118)
280 2g5m_B Neurabin-2; spinophilin 98.9 3.4E-09 1.2E-13 105.6 8.9 82 1238-1320 6-96 (113)
281 1wg6_A Hypothetical protein (r 98.9 1.9E-09 6.4E-14 109.7 7.1 80 1240-1319 29-122 (127)
282 1q7x_A PDZ2B domain of PTP-BAS 98.9 3.6E-09 1.2E-13 104.5 8.9 84 1235-1319 8-102 (108)
283 2vz5_A TAX1-binding protein 3; 98.9 5.7E-09 1.9E-13 107.8 10.6 86 1127-1212 22-126 (139)
284 1ufx_A KIAA1526 protein; PDZ d 98.9 4.2E-09 1.4E-13 102.9 9.0 83 1236-1319 6-97 (103)
285 2edz_A PDZ domain-containing p 98.9 6.7E-09 2.3E-13 103.6 10.6 87 1234-1320 11-98 (114)
286 1vb7_A PDZ and LIM domain 2; P 98.9 3.4E-09 1.2E-13 101.8 8.1 82 1239-1320 7-90 (94)
287 1uep_A Membrane associated gua 98.9 2.5E-09 8.6E-14 104.6 7.3 83 1236-1319 9-96 (103)
288 1ueq_A Membrane associated gua 98.9 1.6E-08 5.4E-13 102.3 13.3 83 1236-1319 19-106 (123)
289 1y7n_A Amyloid beta A4 precurs 98.9 1.1E-08 3.9E-13 97.1 11.4 75 1129-1208 12-88 (90)
290 1wif_A RSGI RUH-020, riken cDN 98.9 7.8E-09 2.7E-13 104.1 10.8 82 1127-1209 26-110 (126)
291 3bpu_A Membrane-associated gua 98.9 8.3E-09 2.8E-13 97.8 10.3 81 1236-1319 3-86 (88)
292 2kjd_A Sodium/hydrogen exchang 98.9 7.8E-09 2.7E-13 105.5 10.9 87 1126-1212 7-95 (128)
293 1n7t_A 99-MER peptide of densi 98.9 7E-09 2.4E-13 101.5 10.0 81 1236-1319 11-101 (103)
294 2jxo_A Ezrin-radixin-moesin-bi 98.8 7.3E-09 2.5E-13 100.3 10.0 86 1234-1320 7-94 (98)
295 2gzv_A PRKCA-binding protein; 98.8 1E-08 3.5E-13 102.1 11.3 85 1234-1318 22-109 (114)
296 2z17_A Pleckstrin homology SEC 98.8 5.7E-09 1.9E-13 102.3 9.2 83 1233-1315 12-103 (104)
297 2koj_A Partitioning defective 98.8 1.2E-08 3.9E-13 101.4 11.5 85 1237-1322 12-104 (111)
298 2vsv_A Rhophilin-2; scaffold p 98.8 1.1E-08 3.9E-13 100.5 11.0 80 1236-1318 23-103 (109)
299 3tsz_A Tight junction protein 98.8 1.8E-08 6.1E-13 122.1 15.1 88 1127-1215 8-97 (391)
300 3k1r_A Harmonin; protein-prote 98.8 1E-08 3.6E-13 112.3 11.6 86 1234-1320 82-169 (192)
301 1x5n_A Harmonin; PDZ domain, u 98.8 1.7E-08 5.7E-13 100.8 12.0 84 1127-1211 14-101 (114)
302 1wf7_A Enigma homologue protei 98.8 8.4E-09 2.9E-13 100.9 9.5 83 1236-1320 5-89 (103)
303 2iwn_A Multiple PDZ domain pro 98.8 1.7E-08 5.8E-13 97.4 11.1 80 1239-1319 7-93 (97)
304 2kpk_A Membrane-associated gua 98.8 1.2E-08 4E-13 104.2 10.4 82 1237-1319 19-105 (129)
305 2edp_A Fragment, shroom family 98.8 8E-09 2.7E-13 100.4 8.7 84 1235-1319 8-94 (100)
306 3soe_A Membrane-associated gua 98.8 1.3E-08 4.4E-13 99.9 9.9 81 1236-1320 12-94 (113)
307 3qik_A Phosphatidylinositol 3, 98.8 2.1E-08 7.2E-13 95.4 11.1 78 1130-1208 19-99 (101)
308 2lob_A Golgi-associated PDZ an 98.3 5.2E-10 1.8E-14 111.0 0.0 83 1126-1208 25-111 (112)
309 3khf_A Microtubule-associated 98.8 1E-08 3.5E-13 99.5 9.1 80 1240-1320 6-94 (99)
310 1gvn_B Zeta; postsegregational 98.8 6.4E-10 2.2E-14 130.0 0.7 173 1473-1651 32-232 (287)
311 2edv_A FERM and PDZ domain-con 98.8 4.6E-09 1.6E-13 101.2 6.6 82 1235-1319 7-89 (96)
312 3sfj_A TAX1-binding protein 3; 98.8 2E-08 6.8E-13 98.4 11.2 80 1130-1209 6-104 (104)
313 1qau_A Neuronal nitric oxide s 98.8 3.3E-08 1.1E-12 98.2 12.7 84 1129-1212 2-89 (112)
314 1wfv_A Membrane associated gua 98.8 5.8E-09 2E-13 102.0 6.8 85 1235-1320 10-97 (103)
315 1v5q_A GRIP1 homolog, glutamat 98.8 1.8E-08 6.1E-13 101.8 10.5 86 1235-1320 14-108 (122)
316 1v5l_A PDZ and LIM domain 3; a 98.8 4.6E-09 1.6E-13 102.8 5.9 83 1129-1212 6-90 (103)
317 1znw_A Guanylate kinase, GMP k 98.8 2.6E-07 9.1E-12 102.5 20.9 164 1472-1646 18-200 (207)
318 1y7n_A Amyloid beta A4 precurs 98.8 2.2E-08 7.4E-13 95.1 10.2 71 1243-1318 19-89 (90)
319 3kzd_A TIAM-1, T-lymphoma inva 98.8 2.2E-08 7.6E-13 94.9 10.1 81 1236-1318 6-91 (94)
320 1whd_A RGS3, regulator of G-pr 98.8 1.1E-08 3.8E-13 99.4 8.2 82 1235-1319 14-95 (100)
321 1uf1_A KIAA1526 protein; PDZ d 98.8 3.3E-08 1.1E-12 100.8 12.0 93 794-893 7-105 (128)
322 3cyy_A Tight junction protein 98.8 3.6E-08 1.2E-12 94.2 11.6 79 1129-1211 3-84 (92)
323 1uf1_A KIAA1526 protein; PDZ d 98.8 5.7E-08 2E-12 99.0 13.5 85 1127-1212 19-106 (128)
324 2kom_A Partitioning defective 98.8 3.2E-08 1.1E-12 99.7 11.5 82 1237-1319 31-120 (121)
325 1vae_A Rhophilin 2, rhophilin, 98.8 5.9E-09 2E-13 103.1 5.9 82 1128-1211 15-97 (111)
326 2yuy_A RHO GTPase activating p 98.8 5E-09 1.7E-13 106.5 5.4 86 1234-1320 6-121 (126)
327 2lob_A Golgi-associated PDZ an 98.2 9.6E-10 3.3E-14 109.1 0.0 84 1233-1316 24-110 (112)
328 2rcz_A Tight junction protein 98.7 3.1E-08 1.1E-12 92.1 10.2 71 820-891 10-80 (81)
329 1wif_A RSGI RUH-020, riken cDN 98.7 1.8E-08 6E-13 101.6 9.0 78 814-892 28-111 (126)
330 2d8i_A T-cell lymphoma invasio 98.7 1.7E-08 5.9E-13 100.1 8.8 88 1235-1324 14-106 (114)
331 2eaq_A LIM domain only protein 98.7 4.2E-08 1.4E-12 93.3 11.2 80 1130-1210 5-89 (90)
332 1ky9_A Protease DO, DEGP, HTRA 98.7 1.7E-09 5.9E-14 133.8 1.5 122 761-892 300-440 (448)
333 1b8q_A Protein (neuronal nitri 98.7 2.1E-08 7.1E-13 102.1 9.0 87 1126-1212 6-96 (127)
334 2qbw_A PDZ-fibronectin fusion 98.7 3.1E-08 1.1E-12 108.9 10.9 69 1139-1208 2-80 (195)
335 1uez_A KIAA1526 protein; PDZ d 98.7 2.4E-08 8.2E-13 97.2 8.7 85 1235-1320 7-94 (101)
336 2vz5_A TAX1-binding protein 3; 98.7 3.5E-08 1.2E-12 101.8 10.4 86 1235-1320 22-125 (139)
337 3cyy_A Tight junction protein 98.7 4.9E-08 1.7E-12 93.2 10.7 71 821-892 13-83 (92)
338 2rcz_A Tight junction protein 98.7 5.5E-08 1.9E-12 90.4 10.6 76 1239-1318 4-80 (81)
339 3sfj_A TAX1-binding protein 3; 98.7 5.2E-08 1.8E-12 95.4 10.8 70 1249-1318 20-104 (104)
340 1x5n_A Harmonin; PDZ domain, u 98.7 5.7E-08 1.9E-12 96.9 11.1 84 1234-1318 13-98 (114)
341 2krg_A Na(+)/H(+) exchange reg 98.7 1.5E-08 5E-13 112.3 7.0 86 1126-1211 7-94 (216)
342 1qau_A Neuronal nitric oxide s 98.7 9.3E-08 3.2E-12 95.0 11.9 83 1238-1320 3-88 (112)
343 1v5l_A PDZ and LIM domain 3; a 98.7 1.6E-08 5.4E-13 98.9 5.8 75 1246-1320 13-89 (103)
344 1vae_A Rhophilin 2, rhophilin, 98.7 1.6E-08 5.5E-13 100.0 5.8 86 1234-1322 13-99 (111)
345 2kjd_A Sodium/hydrogen exchang 98.7 6.8E-08 2.3E-12 98.5 10.5 86 1234-1320 7-94 (128)
346 1ujv_A Membrane associated gua 98.7 1.1E-07 3.9E-12 91.4 11.4 83 1234-1320 8-92 (96)
347 2yub_A LIMK-2, LIM domain kina 98.7 8.4E-08 2.9E-12 95.9 10.8 73 1139-1211 27-106 (118)
348 1wh1_A KIAA1095 protein; PDZ d 98.6 1.1E-07 3.6E-12 96.4 11.0 85 1127-1213 18-110 (124)
349 2eaq_A LIM domain only protein 98.6 8.4E-08 2.9E-12 91.2 9.2 70 1249-1319 18-89 (90)
350 1b8q_A Protein (neuronal nitri 98.6 1.1E-07 3.6E-12 96.9 10.3 86 1235-1320 7-95 (127)
351 2yub_A LIMK-2, LIM domain kina 98.6 1.8E-07 6.1E-12 93.5 10.5 83 1238-1320 17-106 (118)
352 2qbw_A PDZ-fibronectin fusion 98.6 1.2E-07 4.1E-12 104.2 10.0 69 1248-1317 2-80 (195)
353 3qik_A Phosphatidylinositol 3, 98.5 2.9E-07 1E-11 87.6 9.5 76 1240-1317 21-99 (101)
354 2krg_A Na(+)/H(+) exchange reg 98.5 8E-08 2.7E-12 106.4 5.2 87 1234-1321 7-95 (216)
355 1wh1_A KIAA1095 protein; PDZ d 98.4 5.8E-07 2E-11 90.9 10.1 72 1248-1321 32-109 (124)
356 2lj0_A Sorbin and SH3 domain-c 98.2 7.2E-07 2.5E-11 78.6 4.8 56 1330-1394 4-59 (65)
357 2lx7_A GAS-7, growth arrest-sp 98.2 8.7E-07 3E-11 76.5 4.5 52 1334-1394 5-56 (60)
358 4fln_A Protease DO-like 2, chl 98.1 1.4E-05 4.7E-10 99.7 14.8 128 755-890 281-471 (539)
359 2ke9_A Caskin-2; SH3 domain, A 98.1 2.5E-06 8.6E-11 79.3 6.1 61 1330-1395 16-77 (83)
360 1b07_A Protein (proto-oncogene 98.1 1.4E-06 4.9E-11 77.0 4.2 55 1331-1395 2-56 (65)
361 2ed1_A 130 kDa phosphatidylino 98.1 2.2E-06 7.6E-11 78.4 5.2 57 1331-1395 9-65 (76)
362 1tg0_A BBC1 protein, myosin ta 98.1 2.4E-06 8.1E-11 76.4 5.2 61 1329-1395 4-64 (68)
363 2kgt_A Tyrosine-protein kinase 98.1 2.2E-06 7.7E-11 77.5 4.9 61 1329-1395 7-67 (72)
364 2kjp_A Uncharacterized protein 98.1 1.9E-06 6.6E-11 81.8 4.1 57 1261-1320 2-60 (91)
365 2kl1_A YLBL protein; structure 98.1 7.7E-06 2.6E-10 78.2 8.4 61 1259-1320 4-64 (94)
366 2i6v_A General secretion pathw 98.1 5.9E-06 2E-10 77.8 7.4 59 1151-1211 19-79 (87)
367 2i6v_A General secretion pathw 98.1 3.6E-06 1.2E-10 79.2 5.7 61 1260-1320 19-79 (87)
368 2l97_A HTRA, putative serine p 98.0 9.3E-06 3.2E-10 83.1 9.0 60 1150-1212 56-117 (134)
369 2l97_A HTRA, putative serine p 98.0 1.1E-05 3.8E-10 82.6 9.6 61 1259-1320 56-116 (134)
370 2b86_A Cytoplasmic protein NCK 98.0 2.9E-06 9.8E-11 75.4 4.3 54 1331-1395 3-56 (67)
371 1zlm_A Osteoclast stimulating 98.0 3.9E-06 1.3E-10 72.4 5.0 54 1331-1395 2-55 (58)
372 2drm_A Acanthamoeba myosin IB; 98.0 3.9E-06 1.3E-10 72.4 5.0 53 1331-1394 2-54 (58)
373 2ak5_A RHO guanine nucleotide 98.0 4.2E-06 1.4E-10 73.8 5.0 55 1330-1395 4-58 (64)
374 2rqv_A BUD emergence protein 1 98.0 1.5E-06 5.3E-11 84.7 2.4 60 1329-1396 2-61 (108)
375 3i18_A LMO2051 protein; alpha- 98.0 9.9E-06 3.4E-10 78.4 8.1 61 1259-1320 6-66 (100)
376 2v71_A Nuclear distribution pr 98.0 0.00092 3.2E-08 70.4 23.2 71 283-356 6-76 (189)
377 3i18_A LMO2051 protein; alpha- 98.0 9.2E-06 3.2E-10 78.6 7.5 59 1150-1211 6-66 (100)
378 1k4u_S Phagocyte NADPH oxidase 98.0 6E-06 2.1E-10 72.3 5.4 54 1331-1395 4-57 (62)
379 1sem_A SEM-5; SRC-homology 3 ( 98.0 5.3E-06 1.8E-10 71.5 4.9 52 1332-1394 2-53 (58)
380 1uti_A GRB2-related adaptor pr 98.0 5.4E-06 1.9E-10 71.5 4.8 52 1333-1395 2-53 (58)
381 2gnc_A SLIT-ROBO RHO GTPase-ac 98.0 3.5E-06 1.2E-10 73.3 3.5 54 1330-1394 4-57 (60)
382 2iim_A Proto-oncogene tyrosine 98.0 6.2E-06 2.1E-10 72.2 5.1 57 1329-1395 3-59 (62)
383 1cka_A C-CRK N-terminal SH3 do 98.0 4.3E-06 1.5E-10 71.8 4.0 51 1334-1394 3-53 (57)
384 2d8j_A FYN-related kinase; SH3 98.0 7.4E-06 2.5E-10 75.1 5.8 60 1331-1395 6-68 (77)
385 2vwf_A Growth factor receptor- 98.0 5.7E-06 2E-10 71.3 4.7 51 1333-1394 3-53 (58)
386 2ew3_A SH3-containing GRB2-lik 98.0 5.6E-06 1.9E-10 73.9 4.7 53 1332-1395 3-55 (68)
387 2oaw_A Spectrin alpha chain, b 97.9 5.4E-06 1.8E-10 73.3 4.3 56 1334-1394 3-60 (65)
388 2v71_A Nuclear distribution pr 97.9 0.0016 5.6E-08 68.5 23.6 27 307-333 9-35 (189)
389 2xmf_A Myosin 1E SH3; motor pr 97.9 6.7E-06 2.3E-10 71.5 4.7 53 1331-1394 4-56 (60)
390 2ege_A Uncharacterized protein 97.9 6.9E-06 2.3E-10 74.9 5.0 57 1331-1395 6-67 (75)
391 1zx6_A YPR154WP; SH3 domain, p 97.9 6.1E-06 2.1E-10 71.1 4.3 52 1333-1395 3-54 (58)
392 2kjp_A Uncharacterized protein 97.9 6.7E-06 2.3E-10 78.0 5.0 57 831-892 1-59 (91)
393 2kl1_A YLBL protein; structure 97.9 7.2E-06 2.5E-10 78.4 5.2 60 1150-1212 4-65 (94)
394 1oot_A Hypothetical 40.4 kDa p 97.9 7.5E-06 2.6E-10 71.1 4.8 54 1332-1394 3-56 (60)
395 3na7_A HP0958; flagellar bioge 97.9 0.00096 3.3E-08 75.9 23.5 13 574-586 174-186 (256)
396 2pzd_A Serine protease HTRA2; 97.9 2.2E-05 7.7E-10 77.8 8.8 59 1150-1211 34-92 (113)
397 1jo8_A ABP1P, actin binding pr 97.9 7.4E-06 2.5E-10 70.6 4.6 52 1334-1394 2-53 (58)
398 1uj0_A Signal transducing adap 97.9 7.1E-06 2.4E-10 71.8 4.4 54 1331-1395 4-57 (62)
399 2kym_A BUD emergence protein 1 97.9 6.7E-06 2.3E-10 82.2 4.8 57 1332-1396 3-59 (120)
400 2l0a_A STAM-1, signal transduc 97.9 5.1E-06 1.8E-10 74.9 3.6 56 1328-1394 13-68 (72)
401 2fei_A CD2-associated protein; 97.9 5.2E-06 1.8E-10 73.3 3.6 52 1333-1395 2-53 (65)
402 2jte_A CD2-associated protein; 97.9 9.7E-06 3.3E-10 71.4 5.3 56 1330-1394 4-59 (64)
403 2g6f_X RHO guanine nucleotide 97.9 7.8E-06 2.7E-10 70.8 4.6 52 1332-1394 4-55 (59)
404 1x2k_A OSTF1, osteoclast stimu 97.9 7.9E-06 2.7E-10 73.0 4.7 55 1330-1395 5-59 (68)
405 1w70_A Neutrophil cytosol fact 97.9 6.7E-06 2.3E-10 71.4 4.0 52 1332-1394 4-55 (60)
406 2dl7_A KIAA0769 protein; SH3 d 97.9 1E-05 3.4E-10 73.4 5.3 57 1331-1395 7-63 (73)
407 3id1_A Regulator of sigma E pr 97.9 1.6E-05 5.4E-10 76.2 6.8 57 1153-1211 4-62 (95)
408 2nwm_A Vinexin; cell adhesion; 97.9 9.5E-06 3.2E-10 71.7 4.7 51 1334-1395 3-53 (65)
409 1x2q_A Signal transducing adap 97.9 1.1E-05 3.6E-10 76.2 5.3 57 1329-1396 14-70 (88)
410 2ydl_A SH3 domain-containing k 97.9 9.5E-06 3.2E-10 72.6 4.7 53 1334-1395 4-56 (69)
411 2vkn_A Protein SSU81; membrane 97.9 7.9E-06 2.7E-10 73.4 4.2 55 1332-1395 5-59 (70)
412 2dl8_A SLIT-ROBO RHO GTPase-ac 97.9 7.8E-06 2.7E-10 73.9 4.1 56 1329-1395 6-61 (72)
413 1wyx_A CRK-associated substrat 97.9 7.2E-06 2.5E-10 73.5 3.9 56 1332-1395 3-58 (69)
414 3na7_A HP0958; flagellar bioge 97.9 0.0011 3.8E-08 75.4 22.9 6 739-744 190-195 (256)
415 2i4s_A General secretion pathw 97.9 2.7E-05 9.2E-10 76.1 8.2 61 1151-1211 37-97 (105)
416 1ue9_A Intersectin 2; beta bar 97.9 1.2E-05 4.1E-10 74.3 5.4 59 1331-1395 6-64 (80)
417 3h0h_A Proto-oncogene tyrosine 97.9 1.2E-05 4.1E-10 72.9 5.3 56 1331-1395 14-69 (73)
418 2fpe_A C-JUN-amino-terminal ki 97.9 9.9E-06 3.4E-10 70.9 4.4 55 1332-1395 3-57 (62)
419 2bz8_A SH3-domain kinase bindi 97.9 1E-05 3.6E-10 69.7 4.5 52 1333-1395 2-53 (58)
420 1wie_A RIM binding protein 2; 97.9 1.1E-05 3.7E-10 77.4 5.1 60 1329-1396 14-78 (96)
421 2dmo_A Neutrophil cytosol fact 97.9 1.1E-05 3.9E-10 71.9 4.9 54 1331-1395 6-59 (68)
422 1ujy_A RHO guanine nucleotide 97.9 1.2E-05 4.2E-10 73.4 5.2 56 1329-1395 7-62 (76)
423 2eqi_A Phospholipase C, gamma 97.9 1E-05 3.5E-10 72.4 4.6 55 1331-1395 6-60 (69)
424 2cre_A HEF-like protein; SH3 d 97.8 1.5E-05 5.1E-10 71.8 5.6 58 1330-1395 5-62 (71)
425 2k2m_A EPS8-like protein 1; al 97.8 1.1E-05 3.8E-10 72.0 4.7 55 1330-1395 6-60 (68)
426 2eyx_A V-CRK sarcoma virus CT1 97.8 9.8E-06 3.4E-10 72.1 4.3 56 1331-1395 5-60 (67)
427 2egc_A SH3 and PX domain-conta 97.8 1.2E-05 4.1E-10 73.3 4.9 58 1331-1396 9-66 (75)
428 3id1_A Regulator of sigma E pr 97.8 2.3E-05 8E-10 75.0 7.1 58 1262-1319 4-61 (95)
429 3ulr_B SRC substrate cortactin 97.8 1.3E-05 4.5E-10 70.8 4.7 54 1330-1394 7-60 (65)
430 2dbm_A SH3-containing GRB2-lik 97.8 1.3E-05 4.3E-10 72.7 4.6 55 1330-1395 5-59 (73)
431 2dl4_A Protein STAC; SH3 domai 97.8 1.3E-05 4.5E-10 71.5 4.6 54 1331-1395 6-59 (68)
432 2i4s_A General secretion pathw 97.8 3E-05 1E-09 75.7 7.6 61 1260-1320 37-97 (105)
433 2v1q_A SLA1, cytoskeleton asse 97.8 1.5E-05 5E-10 69.3 4.7 54 1333-1394 3-56 (60)
434 1i07_A Epidermal growth factor 97.8 9.1E-06 3.1E-10 70.6 3.4 51 1334-1395 3-53 (60)
435 1gl5_A Tyrosine-protein kinase 97.8 1.1E-05 3.7E-10 71.9 3.9 54 1333-1396 3-56 (67)
436 3c0c_A Endophilin-A2; endocyto 97.8 1.4E-05 4.9E-10 72.4 4.7 55 1330-1395 11-65 (73)
437 2i0n_A Class VII unconventiona 97.8 1.2E-05 4E-10 74.4 4.2 56 1329-1395 7-63 (80)
438 2p3w_A Probable serine proteas 97.8 2.6E-05 8.9E-10 77.2 7.0 58 1259-1319 34-91 (112)
439 2djq_A SH3 domain containing r 97.8 1.8E-05 6E-10 70.7 5.2 54 1331-1395 6-59 (68)
440 2jw4_A Cytoplasmic protein NCK 97.8 1.6E-05 5.3E-10 71.9 4.7 54 1331-1395 6-59 (72)
441 2j6f_A CD2-associated protein; 97.8 1.4E-05 4.7E-10 70.0 4.2 53 1333-1395 2-54 (62)
442 3vkg_A Dynein heavy chain, cyt 97.8 0.0099 3.4E-07 87.5 35.7 19 1168-1186 2693-2711(3245)
443 2ecz_A Sorbin and SH3 domain-c 97.8 1.1E-05 3.7E-10 72.5 3.5 57 1330-1395 5-61 (70)
444 2yuq_A Tyrosine-protein kinase 97.8 1.5E-05 5E-10 74.7 4.5 57 1330-1396 17-73 (85)
445 2pzd_A Serine protease HTRA2; 97.8 3.7E-05 1.3E-09 76.2 7.7 59 1259-1320 34-92 (113)
446 2p3w_A Probable serine proteas 97.8 3.2E-05 1.1E-09 76.5 7.1 59 1150-1211 34-92 (112)
447 1wxb_A Epidermal growth factor 97.8 1.6E-05 5.4E-10 71.0 4.4 54 1331-1395 6-59 (68)
448 2csi_A RIM-BP2, RIM binding pr 97.8 2.1E-05 7.1E-10 71.9 5.3 57 1331-1395 6-67 (76)
449 2m0y_A Dedicator of cytokinesi 97.8 1.9E-05 6.6E-10 71.7 5.1 56 1331-1395 10-65 (74)
450 2j05_A RAS GTPase-activating p 97.8 1.9E-05 6.4E-10 69.8 4.8 55 1332-1395 5-60 (65)
451 2dl3_A Sorbin and SH3 domain-c 97.8 2.2E-05 7.6E-10 70.0 5.3 54 1331-1395 6-59 (68)
452 1u5s_A Cytoplasmic protein NCK 97.8 1.5E-05 5.2E-10 71.8 4.3 57 1331-1395 5-61 (71)
453 3cqt_A P59-FYN, proto-oncogene 97.8 1.6E-05 5.6E-10 73.1 4.6 56 1332-1396 5-60 (79)
454 2bzy_A CRK-like protein, CRKL 97.8 1.2E-05 4.1E-10 71.6 3.5 52 1333-1395 2-55 (67)
455 1w1f_A Tyrosine-protein kinase 97.8 1.7E-05 5.8E-10 70.1 4.4 55 1331-1395 6-60 (65)
456 2cud_A SRC-like-adapter; SH3 d 97.8 1.5E-05 5.2E-10 73.4 4.3 55 1331-1395 16-70 (79)
457 2dlp_A KIAA1783 protein; SH3 d 97.8 1.5E-05 5E-10 74.7 4.2 56 1331-1395 7-62 (85)
458 1csk_A C-SRC SH3 domain; phosp 97.8 1.9E-05 6.3E-10 71.2 4.8 58 1330-1396 9-66 (71)
459 1wxt_A Hypothetical protein FL 97.8 2.1E-05 7E-10 70.2 4.9 54 1331-1395 6-59 (68)
460 2ysq_A RHO guanine nucleotide 97.8 1.7E-05 5.7E-10 73.6 4.5 56 1329-1395 7-62 (81)
461 1x69_A Cortactin isoform A; SH 97.8 1.7E-05 5.9E-10 73.1 4.5 55 1330-1395 15-69 (79)
462 2dm1_A Protein VAV-2; RHO fami 97.8 2.3E-05 8E-10 71.0 5.3 57 1330-1395 5-61 (73)
463 2o9s_A Ponsin; SH3 domain, sig 97.8 1.7E-05 5.7E-10 70.6 4.2 56 1331-1395 5-60 (67)
464 2jt4_A Cytoskeleton assembly c 97.8 2.3E-05 7.9E-10 70.6 5.2 57 1331-1395 5-61 (71)
465 2dbk_A CRK-like protein; struc 97.8 1.9E-05 6.5E-10 74.4 4.8 54 1331-1395 15-70 (88)
466 2k9g_A SH3 domain-containing k 97.7 2.3E-05 7.9E-10 71.0 5.2 56 1331-1395 8-63 (73)
467 3eg3_A Proto-oncogene tyrosine 97.7 2.4E-05 8.3E-10 68.6 5.2 55 1331-1395 4-58 (63)
468 1u3o_A Huntingtin-associated p 97.7 1.9E-05 6.4E-10 71.5 4.3 56 1335-1395 20-75 (82)
469 1yn8_A NBP2, NAP1-binding prot 97.7 1.2E-05 4E-10 69.6 3.0 52 1334-1394 3-54 (59)
470 2gqi_A RAS GTPase-activating p 97.7 1.1E-05 3.8E-10 72.6 3.0 56 1331-1395 6-62 (71)
471 2lcs_A NAP1-binding protein 2; 97.7 1.3E-05 4.4E-10 72.6 3.3 54 1333-1395 6-59 (73)
472 2csq_A RIM-BP2, RIM binding pr 97.7 1.2E-05 4.3E-10 77.2 3.3 58 1331-1396 16-79 (97)
473 2ct3_A Vinexin; SH3 domian, st 97.7 2.7E-05 9.4E-10 69.9 5.3 56 1331-1395 6-61 (70)
474 1y0m_A 1-phosphatidylinositol- 97.7 2E-05 7E-10 68.6 4.3 52 1332-1394 3-55 (61)
475 3vkg_A Dynein heavy chain, cyt 97.7 0.0068 2.3E-07 89.1 32.6 40 553-592 2065-2104(3245)
476 4esr_A Jouberin; AHI-1, AHI1, 97.7 2E-05 6.9E-10 70.5 4.4 57 1332-1398 6-62 (69)
477 1neg_A Spectrin alpha chain, b 97.7 1.9E-05 6.6E-10 73.3 4.3 55 1330-1395 15-69 (83)
478 2fpf_A C-JUN-amino-terminal ki 97.7 1.7E-05 5.9E-10 71.4 3.9 54 1333-1395 7-60 (71)
479 4glm_A Dynamin-binding protein 97.7 2.1E-05 7.2E-10 71.0 4.4 55 1330-1395 11-65 (72)
480 2d8h_A SH3YL1 protein; SH3 dom 97.7 2.1E-05 7E-10 72.7 4.4 58 1329-1395 14-71 (80)
481 3rnj_A Brain-specific angiogen 97.7 2.7E-05 9.2E-10 69.3 4.9 57 1331-1394 6-62 (67)
482 1ruw_A Myosin-3 isoform, MYO3; 97.7 2.2E-05 7.6E-10 70.3 4.3 53 1334-1395 4-57 (69)
483 2a28_A BZZ1 protein; SH3 domai 97.7 2.8E-05 9.5E-10 65.9 4.7 51 1334-1394 2-52 (54)
484 1z9q_A Neutrophil cytosol fact 97.7 1.2E-05 3.9E-10 73.9 2.5 57 1328-1395 14-70 (79)
485 1awj_A ITK; transferase, regul 97.7 8.4E-06 2.9E-10 74.8 1.6 56 1330-1395 18-73 (77)
486 1zuu_A BZZ1 protein; SH3 domai 97.7 1.9E-05 6.5E-10 68.0 3.7 53 1333-1394 2-55 (58)
487 2ebp_A SAM and SH3 domain-cont 97.7 3E-05 1E-09 70.2 5.2 53 1332-1395 9-63 (73)
488 2dil_A Proline-serine-threonin 97.7 2.9E-05 1E-09 69.4 5.0 54 1331-1395 7-60 (69)
489 1nm7_A Peroxisomal membrane pr 97.7 2.6E-05 8.8E-10 69.5 4.5 57 1332-1394 7-65 (69)
490 1aww_A ATK, AMGX1, BPK, bruton 97.7 1.6E-05 5.4E-10 70.8 3.1 55 1331-1395 7-61 (67)
491 2zpm_A Regulator of sigma E pr 97.7 2.8E-05 9.7E-10 73.7 5.1 58 1152-1211 5-63 (91)
492 2zpm_A Regulator of sigma E pr 97.7 3.5E-05 1.2E-09 73.1 5.7 59 1261-1320 5-63 (91)
493 2yun_A Nostrin; nitric oxide s 97.7 4E-05 1.4E-09 70.6 5.9 55 1330-1395 5-59 (79)
494 2kxc_A Brain-specific angiogen 97.7 3.3E-05 1.1E-09 68.6 5.2 57 1331-1395 5-62 (67)
495 1ugv_A KIAA0621, olygophrenin- 97.7 2.5E-05 8.4E-10 70.6 4.3 55 1331-1395 9-63 (72)
496 2pqh_A Spectrin alpha chain, b 97.7 2.7E-05 9.4E-10 71.9 4.7 52 1333-1395 3-54 (80)
497 4ag1_C Fynomer; hydrolase-de n 97.7 2.5E-05 8.6E-10 72.8 4.5 56 1332-1396 6-61 (84)
498 2da9_A SH3-domain kinase bindi 97.7 3E-05 1E-09 69.7 4.7 56 1331-1395 6-61 (70)
499 4f14_A Nebulette; SH3 domain, 97.7 2.4E-05 8.1E-10 68.9 4.0 54 1332-1394 6-59 (64)
500 2epd_A RHO GTPase-activating p 97.7 1.7E-05 5.9E-10 72.5 3.2 54 1331-1395 9-62 (76)
No 1
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=100.00 E-value=2.7e-78 Score=794.00 Aligned_cols=466 Identities=29% Similarity=0.479 Sum_probs=387.6
Q ss_pred CCceEEEEec-------CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEecC
Q psy3835 1139 EPLGIQIQCL-------DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQYSP 1210 (1659)
Q Consensus 1139 ~~lG~sl~~~-------~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 1210 (1659)
.+|||++.++ ...|++|..|.+||+|+++| |++||+|++|||.++.++++.+++.+++.++..|.|.|.|++
T Consensus 165 ~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g 244 (721)
T 2xkx_A 165 KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPS 244 (721)
T ss_pred CCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 4466666553 24689999999999999999 999999999999999999999999999988999999999987
Q ss_pred Ccccc-ccCC----CCCCC--------------------cc------cccC------CCCCCCCeEEEEecCCcCccCeE
Q psy3835 1211 DKYHE-LEGS----GSSSA--------------------EN------ESVS------GRGSGEPRFLMIETRKCSNLGIS 1253 (1659)
Q Consensus 1211 ~~~~~-~~~~----~~~~~--------------------~~------~~~~------~~~~~~~~~v~l~k~~~~~lGi~ 1253 (1659)
..+.. .... .+.++ .. .+.. ......++.|.|.+.. .+|||+
T Consensus 245 ~~~~~~~~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~~~~-~~lG~~ 323 (721)
T 2xkx_A 245 NAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGS-TGLGFN 323 (721)
T ss_pred cccccCCCCCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEEEEECC-CCccEE
Confidence 64210 0000 00000 00 0000 0001245678888765 489999
Q ss_pred EecCC-CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcccccccc-----
Q psy3835 1254 LVGGN-AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVERYNEVK----- 1326 (1659)
Q Consensus 1254 l~gg~-~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~~~~~~~----- 1326 (1659)
+.++. ..|++|..|.+||+|+++| |++||+|++|||++|.++++.+++..|+..++.|+|+|.|++..|.++.
T Consensus 324 i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v~L~v~r~~~~~~~~~~~~~~ 403 (721)
T 2xkx_A 324 IVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSRFEAKIHD 403 (721)
T ss_pred EeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEeCchhhhhhhhhhhh
Confidence 98774 3699999999999999988 9999999999999999999999999999889999999999988776541
Q ss_pred ------------------cCCCCcceeeeccccCCCCCc---cccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcc
Q psy3835 1327 ------------------DKPGDSFYMRALFSRTGDLGD---ALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQ 1385 (1659)
Q Consensus 1327 ------------------~~~~~~~yvra~f~y~~~~~~---~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~ 1385 (1659)
..++++|||||+|+|++..++ +.+|+|++||||||+++ .+.+||+|+++++.+...
T Consensus 404 ~~~~~~~~s~~~g~~~~~~~~~~~~~vrAl~dy~~~~d~~~p~~~LsF~~GDil~v~~~---~~~~WW~a~~~~~~~~~~ 480 (721)
T 2xkx_A 404 LREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDA---GDEEWWQARRVHSDSETD 480 (721)
T ss_pred hhhhcccccccCCccccccccccceeEEEeeccCcCCCCCCccccccccCCCEEEEeec---CCCCeEEEEECCCCCccC
Confidence 124689999999999998776 35699999999999996 467899999998876667
Q ss_pred cccCcCChhHHHHHHHHHhhccccccccccccccccccccccccccchhhhccccCCCCccCCCCCCCcCccccccceee
Q psy3835 1386 QCGIIPSKYKVEEELLLRRSLGDLESDARRATRRSFFRRKKHQRSDSKELASFSNINLGWYSDSGTLNEDSVSLASYQRV 1465 (1659)
Q Consensus 1386 ~~GlIPs~~~~e~~~~~~~~~~~~~~~~~~~~r~~~~~rkk~~r~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ye~V 1465 (1659)
..|+|||++++|++...+. . ...|.+++. .. . +...+++||+|
T Consensus 481 ~~G~iPs~~~~e~~~~~~~--~-----------~~~~~~~~~----------------------~~-~-~~~~~~~Ye~V 523 (721)
T 2xkx_A 481 DIGFIPSKRRVERREWSRL--K-----------AKDWGSSSG----------------------SQ-G-REDSVLSYETV 523 (721)
T ss_pred ccceeecHHHHHHHHhhhc--c-----------cccccCcch----------------------hh-c-ccccCCCceee
Confidence 8999999999998643321 0 011111100 00 1 13467899999
Q ss_pred eccCCCCCCCcEEEECCChHHHHHHHhhhCCCcccccccceec--------------C-ChHHHHHhccCCceEEEEEeC
Q psy3835 1466 IRLNSEPVLRPVILVGALSDTVTDKLLQDFPDKFVRCAPEIMH--------------C-PQAAMEKGLADNLFVDYRKKG 1530 (1659)
Q Consensus 1466 ~~~~~~~~~RpvVl~Gp~g~~l~~~Ll~~~p~~f~~~v~~Ttr--------------v-s~~~f~~~i~~~~flE~~~~~ 1530 (1659)
.++++ .++|||||+||+.++|+++|++.+|+.|.+||||||| + |+++|+++|++|.||||++|+
T Consensus 524 ~~~~~-~~~r~vvl~GP~K~tl~~~L~~~~~~~~~~~vs~TTR~~r~gE~~G~dY~Fv~s~~~f~~~i~~~~flE~~~~~ 602 (721)
T 2xkx_A 524 TQMEV-HYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIRAHKFIEAGQYN 602 (721)
T ss_pred ecccC-CCCCEEEEECCCHHHHHHHHHHhCccceeecccccccCCCCCccCCceeEEecCHHHHHHHHhcCCceEEEEEC
Confidence 99987 8999999999999999999999999999999999998 6 999999999999999999999
Q ss_pred CeeeeecHHHHHHHHHcCCCeEEEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHH
Q psy3835 1531 AYFECTSVAAVKDACDKNNAHVILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMY 1610 (1659)
Q Consensus 1531 g~~YGts~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~ 1610 (1659)
||||||++++|++++++ |++|||||+++|+++|+...++|++|||.|||+++|++ ++ .| + +++++++++
T Consensus 603 g~~YGt~~~~v~~~~~~-g~~~ildi~~~~~~~l~~~~~~p~~ifi~pps~~~L~~-l~---~R----~--t~~~~~~rl 671 (721)
T 2xkx_A 603 SHLYGTSVQSVREVAEQ-GKHCILDVSANAVRRLQAAHLHPIAIFIRPRSLENVLE-IN---KR----I--TEEQARKAF 671 (721)
T ss_pred CccceeeHHHHHHHHHC-CCcEEEeCCHHHHHHHHhcccCCEEEEEeCCcHHHHHH-Hh---cc----C--CHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999998 44 23 2 567899999
Q ss_pred HHHHHHHHHcCCcceEEEeCCCCHHHHHHHHHHHHHhhcCCceEEeCC
Q psy3835 1611 EHGLKIECEHKHYISAVIPAGVNIAYMCTQIQTAVELEQSKTLWVPSL 1658 (1659)
Q Consensus 1611 ~~a~~~e~~~~~~fd~vi~n~~~~~~~~~~l~~ii~~~~~~~~Wvp~~ 1658 (1659)
++|.++|..|.++||++|+|| |++.||.+|+++|..++.+++|||++
T Consensus 672 ~~a~~~e~~~~~~fd~vi~Nd-~l~~a~~~l~~~i~~~~~~~~Wvp~~ 718 (721)
T 2xkx_A 672 DRATKLEQEFTECFSAIVEGD-SFEEIYHKVKRVIEDLSGPYIWVPAR 718 (721)
T ss_pred HHHHHHHHhccccCcEEEECc-CHHHHHHHHHHHHHhccCCcEEeecc
Confidence 999888999999999999999 99999999999999999999999986
No 2
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=100.00 E-value=3.1e-62 Score=596.30 Aligned_cols=377 Identities=27% Similarity=0.458 Sum_probs=297.5
Q ss_pred CeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcC--CCCeEEEE
Q psy3835 1237 PRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK--PADKVTVL 1314 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~--~~~~v~L~ 1314 (1659)
+++|.+.+. .+|||++.|++..|+||.+|.+||||+++||++||+|++|||+++.++++.+++..|.. .++.|+|+
T Consensus 2 ~r~V~l~k~--~~lG~~i~gg~~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~ 79 (468)
T 3shw_A 2 MKLVKFRKG--DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL 79 (468)
T ss_dssp EEEEEEECC--SSCCEEEEEETTTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEE
T ss_pred ceEEEEecC--CccceEEEccCcCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEE
Confidence 477888885 58999999988889999999999999999999999999999999999999999999886 78999999
Q ss_pred EEeCcccccccc-cCCCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCCh
Q psy3835 1315 AQYSVERYNEVK-DKPGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSK 1393 (1659)
Q Consensus 1315 v~r~~~~~~~~~-~~~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~ 1393 (1659)
|.|++..|..+. ..++++|||||+|+|+|... .+|+|++||||||+|++|+++.+||||++++.++.+..+|+|||+
T Consensus 80 V~r~g~~~~~~~~~~~g~s~yVralfdy~~~~~--~~LsF~~GDIL~V~d~~~~~d~~wW~A~~~~~~~~~~~~GlIPs~ 157 (468)
T 3shw_A 80 AQKKKDVYRRIVESDVGDSFYIRTHFEYEKESP--YGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNK 157 (468)
T ss_dssp EEECHHHHHHHHHHTCCCCEEEEECSCBCCSST--TBCCBCTTCEEEEEESSGGGCTTEEEEEEECTTSCEEEEEEEECH
T ss_pred EEECCccchhhhccccccccccccccCcCCCCC--CCceEccCCEEEEeecccCCCCCeEEEEEcCCCCcccccceecCH
Confidence 999998887763 35689999999999999774 599999999999999999999999999999987766789999999
Q ss_pred hHHHHHHHHHhhccccccccccccccccccccccccccchhhhccccCCCCccCCCCCCCcCccccccceeeeccCCCCC
Q psy3835 1394 YKVEEELLLRRSLGDLESDARRATRRSFFRRKKHQRSDSKELASFSNINLGWYSDSGTLNEDSVSLASYQRVIRLNSEPV 1473 (1659)
Q Consensus 1394 ~~~e~~~~~~~~~~~~~~~~~~~~r~~~~~rkk~~r~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ye~V~~~~~~~~ 1473 (1659)
+++||+...+..... ...+.+.+||+.+.. |.+.+..+ .+.. ..+.. + +...+++||+|+++++ ++
T Consensus 158 ~~~e~~~~~~~~~~~----~~~~~~~~f~~~~~~-r~~kk~~~-~~~~-----~~~~~-~-~~~~~~~YEeV~~~~~-~~ 223 (468)
T 3shw_A 158 NRAEQLASVQYTLPK----TAGGDRADFWRFRGL-RSSKRNLR-KSRE-----DLSAQ-P-VQTKFPAYERVVLREA-GF 223 (468)
T ss_dssp HHHHHHHHHHHC--------------------------------------------------CCCCCSEEEEEEECC-SS
T ss_pred HHHHHHHHHhhhhhc----cccccccchhhhccc-cccccccc-cchh-----hcccc-c-ccccCCCcceeEcccC-CC
Confidence 999997655432110 111345566532211 11101000 0000 00011 1 1246779999999887 89
Q ss_pred CCcEEEECCChHHHHHHHhhhCCCcccccccceecCChHHHHHhccCCceEEEEEeCC-eeeeecHHHHHHHHHcCCCeE
Q psy3835 1474 LRPVILVGALSDTVTDKLLQDFPDKFVRCAPEIMHCPQAAMEKGLADNLFVDYRKKGA-YFECTSVAAVKDACDKNNAHV 1552 (1659)
Q Consensus 1474 ~RpvVl~Gp~g~~l~~~Ll~~~p~~f~~~v~~Ttrvs~~~f~~~i~~~~flE~~~~~g-~~YGts~~~V~~v~~~~gk~~ 1552 (1659)
+|||||+||+|.-|+++|++.+|+.|.+| ||| .+.- +.+| +||-|++++|++++++ ||||
T Consensus 224 ~r~iVlsGPsG~Gl~~~Ll~~~p~~f~s~---~TR-pR~g--------------E~dG~~Y~FTs~~~V~~vl~~-Gk~~ 284 (468)
T 3shw_A 224 LRPVTIFGPIADVAREKLAREEPDIYQIA---KSE-PRDA--------------GTDQRSSGIIRLHTIKQIIDQ-DKHA 284 (468)
T ss_dssp CCCEEEESTTHHHHHHHHHHHCTTTEEEC---CCB-C------------------------CBCCHHHHHHHHTT-TCEE
T ss_pred CCEEEEECCCHHHHHHHHHHhCCCceeee---cCC-CCCc--------------ccccccCCcccHHHHHHHHHC-CCeE
Confidence 99999999999669999999999999875 477 5431 2222 4455999999999999 9999
Q ss_pred EEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHHHHHHcCCcceEEEeCCC
Q psy3835 1553 ILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGLKIECEHKHYISAVIPAGV 1632 (1659)
Q Consensus 1553 iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~~~e~~~~~~fd~vi~n~~ 1632 (1659)
||||++||+++|+...++|++|||+|||+++|+++++ |+ .+.+++.+++|+++|.++|..|.|+|||+|+||
T Consensus 285 iLdId~qg~~~l~~~~~~p~~IFI~PPS~e~L~~~~~----rl---~~~see~~~r~~~~a~~~e~~~~~~fD~vIvNd- 356 (468)
T 3shw_A 285 LLDVTPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMRM----RL---CPESRKSARKLYERSHKLRKNNHHLFTTTINLN- 356 (468)
T ss_dssp EECCCHHHHHHHHHTTCCCEEEEEECSCHHHHHHHHH----HH---CTTCCCCHHHHHHHHHHHHHHHGGGCSEEEECB-
T ss_pred EEEeCHHHHHHHHhcCCCCEEEEEeCcCHHHHHHHHh----cc---CCCCHHHHHHHHHHHHHHHHhhhccCCEEEECC-
Confidence 9999999999999999999999999999999998654 32 145566899999999899999999999999999
Q ss_pred CH-HHHHHHHHHHHHhhcCCceEEeCC
Q psy3835 1633 NI-AYMCTQIQTAVELEQSKTLWVPSL 1658 (1659)
Q Consensus 1633 ~~-~~~~~~l~~ii~~~~~~~~Wvp~~ 1658 (1659)
|+ +.||.+|+.||..++.+|+|||++
T Consensus 357 dl~d~a~~~L~~ii~~~~~~~~WvP~~ 383 (468)
T 3shw_A 357 SMNDGWYGALKEAIQQQQNQLVWVSEG 383 (468)
T ss_dssp TTBCHHHHHHHHHHHHHHTSCEEEEC-
T ss_pred CcHHHHHHHHHHHHHHhcCCCEEeCCc
Confidence 99 599999999999999999999986
No 3
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=100.00 E-value=1.7e-61 Score=586.41 Aligned_cols=375 Identities=26% Similarity=0.454 Sum_probs=296.7
Q ss_pred CCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHc--CCCCeEE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVT 1312 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~--~~~~~v~ 1312 (1659)
+.++++.+.+.. +|||++.+++..|++|..|.+||||+++||++||+|++|||.++.++++.+++..+. ..+..++
T Consensus 8 ~~~~~v~~~k~~--~lG~~i~gg~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~ 85 (391)
T 3tsz_A 8 PSMKLVKFRKGD--SVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVT 85 (391)
T ss_dssp -CEEEEEEECCS--SCCEEEEEETTTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEE
T ss_pred CCcEEEEeecCC--ceeEEEEecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEE
Confidence 456778888765 699999998888999999999999999999999999999999999999999999988 4788999
Q ss_pred EEEEeCcccccccc-cCCCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcC
Q psy3835 1313 VLAQYSVERYNEVK-DKPGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIP 1391 (1659)
Q Consensus 1313 L~v~r~~~~~~~~~-~~~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIP 1391 (1659)
|+|.|+++.|..+. ..++++|||||+|+|++..+ .+|+|++||||||+|++|+++.+||+|+++++++.....|+||
T Consensus 86 l~v~r~~~~~~~~~~~~~~~~~~vral~dy~~~~~--~~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~~~G~IP 163 (391)
T 3tsz_A 86 ILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESP--YGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIP 163 (391)
T ss_dssp EEEEECHHHHGGGTSSCCSCCEEEEECSCBCCSST--TBCCBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEEEEEEEE
T ss_pred EEEeeCCcccccccccccccccccccccccCCCCC--CcceEccCCEEEEEeccCCCCCCeEEEEEeCCCCCcccCCEec
Confidence 99999999888874 35789999999999999654 4999999999999999999999999999999876666799999
Q ss_pred ChhHHHHHHHHHhhccccccccccccccccccccc---cccccchhhhccccCCCCccCCCCCCCcCccccccceeeecc
Q psy3835 1392 SKYKVEEELLLRRSLGDLESDARRATRRSFFRRKK---HQRSDSKELASFSNINLGWYSDSGTLNEDSVSLASYQRVIRL 1468 (1659)
Q Consensus 1392 s~~~~e~~~~~~~~~~~~~~~~~~~~r~~~~~rkk---~~r~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ye~V~~~ 1468 (1659)
|++++|++...+.. ......+.+.+||++++ ..+..+++....+ ..+ +...+++||+|+++
T Consensus 164 s~~~~e~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~k~~~~k~~~~~~----------~~~--~~~~~~~YE~V~~~ 227 (391)
T 3tsz_A 164 NKNRAEQLASVQYT----LPKTAGGDRADFWRFRGLRSSKRNLRKSREDLS----------AQP--VQTKFPAYERVVLR 227 (391)
T ss_dssp CHHHHHHHHSSCCC-------------------------------------------------------CCCSEEEEEEE
T ss_pred CHHHHHHHHHHHhh----hcccccccccccccccccccccccccccccccc----------ccc--ccccCCCcceEECc
Confidence 99999986543211 00111123445554221 1111111111111 111 12467799999998
Q ss_pred CCCCCCCcEEEECCChHHHHHHHhhhCCCcccccccceecCChHHHHHhccCCceEEEEEeCC-eeeeecHHHHHHHHHc
Q psy3835 1469 NSEPVLRPVILVGALSDTVTDKLLQDFPDKFVRCAPEIMHCPQAAMEKGLADNLFVDYRKKGA-YFECTSVAAVKDACDK 1547 (1659)
Q Consensus 1469 ~~~~~~RpvVl~Gp~g~~l~~~Ll~~~p~~f~~~v~~Ttrvs~~~f~~~i~~~~flE~~~~~g-~~YGts~~~V~~v~~~ 1547 (1659)
++ +++|||||+||||+||+++|++.+|+.|.++ ||-.+. ++.+| +||-+++++|++++++
T Consensus 228 ~~-~~~r~iVlsGPsg~tl~~~L~~~~p~~~~~~----tr~pR~--------------gE~dG~~Y~Fv~~~~V~~~~~~ 288 (391)
T 3tsz_A 228 EA-GFLRPVTIFGPIADVAREKLAREEPDIYQIA----KSEPRD--------------AGTDQRSSGIIRLHTIKQIIDQ 288 (391)
T ss_dssp EC-SSCCCEEEESTTHHHHHHHHHHHCTTTEEEC----CCCCCC--------------SSSCCC--CCCCHHHHHHHHTT
T ss_pred CC-CCCCEEEEECCCHHHHHHHHHhhCccccccc----cCCCCC--------------cccCCccCCcCcHHHHHHHHHc
Confidence 87 8999999999999999999999999988863 443222 13334 5666799999999999
Q ss_pred CCCeEEEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHHHHHHcCCcceEE
Q psy3835 1548 NNAHVILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGLKIECEHKHYISAV 1627 (1659)
Q Consensus 1548 ~gk~~iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~~~e~~~~~~fd~v 1627 (1659)
|||||||||+||+++|+...++|++|||+|||+++|+++++ |. .+++++.+++++++|.++|..|.|+|||+
T Consensus 289 -Gk~~iLdId~qg~~~l~~~~~~p~~IFI~PPS~~~L~~~~~----r~---~~~s~e~~~~~~~~a~~~e~~~~~~fd~v 360 (391)
T 3tsz_A 289 -DKHALLDVTPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMRM----RL---CPESRKSARKLYERSHKLRKNNHHLFTTT 360 (391)
T ss_dssp -TCEEEECCCHHHHHHHHHTTCCCEEEEEECCCHHHHHHHHH----HH---CSSCCCCHHHHHHHHHHHHHHHGGGCSEE
T ss_pred -CCEEEEEeCHHHHHHHHhCCCCCEEEEEeCcCHHHHHHHHh----cC---CCCCHHHHHHHHHHHHHHHHhccccCcEE
Confidence 99999999999999999999999999999999999998744 32 13556678999999989999999999999
Q ss_pred EeCCCCHH-HHHHHHHHHHHhhcCCceEEeC
Q psy3835 1628 IPAGVNIA-YMCTQIQTAVELEQSKTLWVPS 1657 (1659)
Q Consensus 1628 i~n~~~~~-~~~~~l~~ii~~~~~~~~Wvp~ 1657 (1659)
|+|| |++ .||.+|++||..++++|+|||.
T Consensus 361 ivNd-~l~~~a~~~l~~ii~~~~~~~~Wvp~ 390 (391)
T 3tsz_A 361 INLN-SMNDGWYGALKEAIQQQQNQLVWVSE 390 (391)
T ss_dssp EECC-TTCCHHHHHHHHHHHHHHHSEEEEEC
T ss_pred EECC-CcHHHHHHHHHHHHHHhcCCCeeccC
Confidence 9999 998 7999999999999999999996
No 4
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=100.00 E-value=6.7e-60 Score=547.09 Aligned_cols=266 Identities=33% Similarity=0.574 Sum_probs=225.1
Q ss_pred CcceeeeccccCCCCCc---cccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHHHHHHHHHhhcc
Q psy3835 1331 DSFYMRALFSRTGDLGD---ALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKVEEELLLRRSLG 1407 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~---~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~e~~~~~~~~~~ 1407 (1659)
.+|||||+|||+|..|+ ..||+|++||||||+|| +|.+||||++|+.++....+|+|||+.++|++...+.
T Consensus 4 ~s~yvRa~fdY~~~~D~~~P~~gL~F~~gDiL~V~~~---~d~~wWqA~~v~~~~~~~~~GlIPS~~~~e~~~~~~~--- 77 (292)
T 3tvt_A 4 RSLYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNA---SDDEWWQARRVLGDNEDEQIGIVPSKRRWERKMRARD--- 77 (292)
T ss_dssp -CCEEEECSCBCC---------CCCBCTTCEEEEEEC---CSSSEEEECCCCC--------EEECHHHHHHHHHC-----
T ss_pred ceEEEEEeccCCCCCCCCCCCCcCCcCCCCEEEEeec---CCCCeEEEEEeCCCCCccceeEEeChHHHHHHHHHhh---
Confidence 68999999999998875 34899999999999997 6789999999988777788999999999998532210
Q ss_pred ccccccccccccccccccccccccchhhhccccCCCCccCCCCCCCcCccccccceeeeccCCCCCCCcEEEECCChHHH
Q psy3835 1408 DLESDARRATRRSFFRRKKHQRSDSKELASFSNINLGWYSDSGTLNEDSVSLASYQRVIRLNSEPVLRPVILVGALSDTV 1487 (1659)
Q Consensus 1408 ~~~~~~~~~~r~~~~~rkk~~r~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ye~V~~~~~~~~~RpvVl~Gp~g~~l 1487 (1659)
+... ....+++||+|+++++ +++|||||+||+.+||
T Consensus 78 ------------------~~~~-------------------------~~~~~~~YE~V~~~~~-~~~RpvVl~Gp~K~tl 113 (292)
T 3tvt_A 78 ------------------RSVK-------------------------SEENVLSYEAVQRLSI-NYTRPVIILGPLKDRI 113 (292)
T ss_dssp ---------------------------------------------------CCCEEEEEEEEC-SSCCCEEEESTTHHHH
T ss_pred ------------------cccc-------------------------ccccccchheEEeccC-CCCCeEEEeCCCHHHH
Confidence 0000 0124669999999988 9999999999999999
Q ss_pred HHHHhhhCCCcccccccceec--------------C-ChHHHHHhccCCceEEEEEeCCeeeeecHHHHHHHHHcCCCeE
Q psy3835 1488 TDKLLQDFPDKFVRCAPEIMH--------------C-PQAAMEKGLADNLFVDYRKKGAYFECTSVAAVKDACDKNNAHV 1552 (1659)
Q Consensus 1488 ~~~Ll~~~p~~f~~~v~~Ttr--------------v-s~~~f~~~i~~~~flE~~~~~g~~YGts~~~V~~v~~~~gk~~ 1552 (1659)
+++|++++|+.|.+||||||| | ++++|+++|++|.||||++|+||||||++++|++++++ |++|
T Consensus 114 ~~~Ll~~~p~~f~~sVs~TTR~pR~gE~dG~dY~Fv~s~e~fe~~i~~~~flE~a~~~gn~YGT~~~~V~~~~~~-gk~v 192 (292)
T 3tvt_A 114 NDDLISEYPDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEK-GKHC 192 (292)
T ss_dssp HHHHHHHCTTTEECCCCEECSCCCTTCCBTTTBEECSCHHHHHHHHHTTCEEEEEEETTEEEEEEHHHHHHHHHH-TCEE
T ss_pred HHHHHHhChhhccccccCCccCCcCCccCCccccccCCHHHHHHHHhcCceEEEEEEccceeEEehHHHHHHHHc-CCcE
Confidence 999999999999999999998 4 89999999999999999999999999999999999999 9999
Q ss_pred EEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHHHHHHcCCcceEEEeCCC
Q psy3835 1553 ILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGLKIECEHKHYISAVIPAGV 1632 (1659)
Q Consensus 1553 iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~~~e~~~~~~fd~vi~n~~ 1632 (1659)
|||||++|+++|+...++|++|||.|||+++|+++++ .+ ++++++++++++.++|.+|+|+||+||+||
T Consensus 193 iLdid~qg~~~lk~~~~~pi~IFI~PpS~e~L~~r~~-------~r---~~e~~~~~~~r~~k~e~e~~~~fD~vIvNd- 261 (292)
T 3tvt_A 193 ILDVSGNAIKRLQVAQLYPVAVFIKPKSVDSVMEMNR-------RM---TEEQAKKTYERAIKMEQEFGEYFTGVVQGD- 261 (292)
T ss_dssp EECCCTHHHHHHHHTTCCCEEEEECCSCHHHHHHTCT-------TS---CTTHHHHHHHHHHHHHHHHTTTCSEEECCS-
T ss_pred EEeccchhhhhcccccccceEEEEECCCHHHHHHHHh-------CC---CchhHHHHHHHHHHHHHhhhhhCCEEEECc-
Confidence 9999999999999999999999999999999998765 22 334677888888899999999999999999
Q ss_pred CHHHHHHHHHHHHHhhcCCceEEeCC
Q psy3835 1633 NIAYMCTQIQTAVELEQSKTLWVPSL 1658 (1659)
Q Consensus 1633 ~~~~~~~~l~~ii~~~~~~~~Wvp~~ 1658 (1659)
|++.||.+|++||.+++.+++|||+.
T Consensus 262 dle~a~~~l~~iI~~e~~~~~WVP~~ 287 (292)
T 3tvt_A 262 TIEEIYSKVKSMIWSQSGPTIWVPSK 287 (292)
T ss_dssp SHHHHHHHHHHHHHHHTCSEEEEEC-
T ss_pred CHHHHHHHHHHHHHHhhCCCeEecCc
Confidence 99999999999999999999999974
No 5
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-54 Score=499.41 Aligned_cols=284 Identities=24% Similarity=0.433 Sum_probs=211.3
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCC------CCCcEEEEEeccCCCcccccCcCChhHHHHHHHHH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNG------VPGHWRAWLVDADGFRQQCGIIPSKYKVEEELLLR 1403 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~------~~~~W~a~~v~~~~~~~~~GlIPs~~~~e~~~~~~ 1403 (1659)
||+|||||+|+|.+.... +|+|++||||||+||++++ ..+||+|+++++++.+...|+|||++++||+...+
T Consensus 2 gdsfyVRalfdy~~~~~~--eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~aeq~~~~~ 79 (308)
T 3kfv_A 2 GDSFYIRTHFELEPSPPS--GLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAEQLASLE 79 (308)
T ss_dssp -CCEEEEECSCBCCCSSS--BCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCHHHHHHHHHHH
T ss_pred CccEEEEEecCcCCCCcc--cCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHHHHHHHH
Confidence 799999999999997655 9999999999999998877 57899999999988778899999999999976655
Q ss_pred hhcccccc----cccccccccccccccccc----ccchhhhccccCCCCccCCCCCCCcCccccccceeeeccCCCCCCC
Q psy3835 1404 RSLGDLES----DARRATRRSFFRRKKHQR----SDSKELASFSNINLGWYSDSGTLNEDSVSLASYQRVIRLNSEPVLR 1475 (1659)
Q Consensus 1404 ~~~~~~~~----~~~~~~r~~~~~rkk~~r----~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ye~V~~~~~~~~~R 1475 (1659)
........ ....+.|++||++|+..+ ..+++..+++. ......+++||+|+++++ +++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~r~~f~~~~~~r~~~k~~~~~~~~d~~~------------~~~~~~~~~YE~V~~~~~-~~~R 146 (308)
T 3kfv_A 80 AAQRAVGVGPGSSAGSNARAEFWRLRGLRRGAKKTTQRSREDLSA------------LTRQGRYPPYERVVLREA-SFKR 146 (308)
T ss_dssp HHHCC-----------------------------------CCCHH------------HHHHHTCCSEEEEEEEEC-SSCC
T ss_pred Hhhhhcccccccccccccccchhhhcccccccccccccccccccc------------ccccCCCcCchheecccc-CCCC
Confidence 43322211 112356788887652211 11111111100 001235679999999997 9999
Q ss_pred cEEEECCChHHHHHHHhhhCCCcccccccceecCChHHHHHhccCCceEEEEEeCCeeeeecHHHHHHHHHcCCCeEEEE
Q psy3835 1476 PVILVGALSDTVTDKLLQDFPDKFVRCAPEIMHCPQAAMEKGLADNLFVDYRKKGAYFECTSVAAVKDACDKNNAHVILD 1555 (1659)
Q Consensus 1476 pvVl~Gp~g~~l~~~Ll~~~p~~f~~~v~~Ttrvs~~~f~~~i~~~~flE~~~~~g~~YGts~~~V~~v~~~~gk~~iLd 1555 (1659)
||||+||+.++|+++|+.++|++|++|||. .+.|.+|+|| ++++|++++++ ||+||||
T Consensus 147 PvVl~GP~k~~l~~~L~~~~P~~F~~~v~~---------~r~i~~~~fi------------s~~~V~~vl~~-Gk~~ILD 204 (308)
T 3kfv_A 147 PVVILGPVADIAMQKLTAEMPDQFEIAETV---------SRTDSPSKII------------KLDTVRVIAEK-DKHALLD 204 (308)
T ss_dssp CEEEESTTHHHHHHHHHHHCTTTEEECCCC-----------------CC------------CHHHHHHHHHT-TCEEEEC
T ss_pred eEEEeCccHHHHHHHHHHhCcccccccccc---------cccccCCCee------------cHHHHHHHHHC-CCcEEEE
Confidence 999999999999999999999999999993 2347888887 99999999999 9999999
Q ss_pred cChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHHHHHHcCCcceEEE-eCCCCH
Q psy3835 1556 VSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGLKIECEHKHYISAVI-PAGVNI 1634 (1659)
Q Consensus 1556 i~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~~~e~~~~~~fd~vi-~n~~~~ 1634 (1659)
||+||+++|+...++|++|||.|||+++|++++. |. .+++++.+++|+++|.++|..|.++|||+| +|| |+
T Consensus 205 Id~QGa~~lk~~~~~pi~IFI~PPS~eeL~~rr~----R~---~~esee~~~r~~~aa~eiE~~~~~~FD~vI~VND-dl 276 (308)
T 3kfv_A 205 VTPSAIERLNYVQYYPIVVFFIPESRPALKALRQ----WL---APASRRSTRRLYAQAQKLRKHSSHLFTATIPLNG-TS 276 (308)
T ss_dssp CCHHHHHHHHHTTCCCEEEEEEESCHHHHHHHHH----HH---STTCCCCHHHHHHHHHHHHHHHGGGCSEEEEECS-SS
T ss_pred ECHHHHHHHHhcCCCCEEEEEeCCCHHHHHHHHh----cC---CCCCHHHHHHHHHHHHHHHHhhhccCcEEEEcCC-CH
Confidence 9999999999999999999999999999999744 32 234556788888998889999999999999 999 99
Q ss_pred HHHHHHHHHHHHhhcCCceEEeCC
Q psy3835 1635 AYMCTQIQTAVELEQSKTLWVPSL 1658 (1659)
Q Consensus 1635 ~~~~~~l~~ii~~~~~~~~Wvp~~ 1658 (1659)
+.||.+|+.||..++++|||||++
T Consensus 277 e~A~~~L~~iI~~~~~epqWvp~~ 300 (308)
T 3kfv_A 277 DTWYQELKAIIREQQTRPIWTAED 300 (308)
T ss_dssp THHHHHHHHHHHHHTTSEEEEEC-
T ss_pred HHHHHHHHHHHHHhcCCCeEeehh
Confidence 999999999999999999999987
No 6
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=100.00 E-value=1.1e-50 Score=473.78 Aligned_cols=274 Identities=29% Similarity=0.484 Sum_probs=236.3
Q ss_pred cceeeeccccCCCCCc---cccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHHHHHHHHHhhccc
Q psy3835 1332 SFYMRALFSRTGDLGD---ALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKVEEELLLRRSLGD 1408 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~---~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~e~~~~~~~~~~~ 1408 (1659)
+||+||+|||++..++ +.+|+|++||||+|+++ .+.+||+|++++..+.....|+|||++++|++...+. .
T Consensus 1 s~~vrAlydy~~~~~~~~p~~eLsf~~GDil~V~~~---~d~~WW~a~~~~~~~~~~~~G~iPsny~~e~~~~~~~--~- 74 (295)
T 1kjw_A 1 GFYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDA---GDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRL--K- 74 (295)
T ss_dssp CEEEEESSCBCHHHHHCCCSSBCCBCTTCEEEEEEC---CSSSEEEEEECCSSCCCSCCEEEECHHHHHHHHHTSC--C-
T ss_pred CEEEEEeeccCCCCCCCCCCcCCcCCCCCEEEEEEe---CCCCeEEEEECCCCCccCceeEeecHHHHHHHHHhhh--c-
Confidence 6899999999987654 45999999999999996 5789999999987654567999999999988543210 0
Q ss_pred cccccccccccccccccccccccchhhhccccCCCCccCCCCCCCcCccccccceeeeccCCCCCCCcEEEECCChHHHH
Q psy3835 1409 LESDARRATRRSFFRRKKHQRSDSKELASFSNINLGWYSDSGTLNEDSVSLASYQRVIRLNSEPVLRPVILVGALSDTVT 1488 (1659)
Q Consensus 1409 ~~~~~~~~~r~~~~~rkk~~r~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ye~V~~~~~~~~~RpvVl~Gp~g~~l~ 1488 (1659)
...|. . ++ + .. .....+++||+|.++++ .++|||||+||+.+||+
T Consensus 75 ---------~~~~~------~-~~-------~---------~~--~~~~~~~~Ye~V~~~~~-~~~r~ivl~GPgK~tl~ 119 (295)
T 1kjw_A 75 ---------AKDWG------S-SS-------G---------SQ--GREDSVLSYETVTQMEV-HYARPIIILGPTKDRAN 119 (295)
T ss_dssp ------------CC------S-CC-------S---------SC--CCCCCCCCEEEEEEEEC-CSCCCEEEESTTHHHHH
T ss_pred ---------ccccC------c-cc-------c---------cc--cccCCCCCcceeeeecC-CCCCEEEEECCCHHHHH
Confidence 00010 0 00 0 01 11246789999999987 89999999999889999
Q ss_pred HHHhhhCCCcccccccceec--------------C-ChHHHHHhccCCceEEEEEeCCeeeeecHHHHHHHHHcCCCeEE
Q psy3835 1489 DKLLQDFPDKFVRCAPEIMH--------------C-PQAAMEKGLADNLFVDYRKKGAYFECTSVAAVKDACDKNNAHVI 1553 (1659)
Q Consensus 1489 ~~Ll~~~p~~f~~~v~~Ttr--------------v-s~~~f~~~i~~~~flE~~~~~g~~YGts~~~V~~v~~~~gk~~i 1553 (1659)
++|++.+|+.|.+||||||| | |+++|+++|++|.||||++|+||||||++++|++++++ |++||
T Consensus 120 ~~L~~~~~~~~~~~vs~TTR~~R~gE~~G~dY~Fv~s~eef~~~i~~g~flE~~~~~g~~YGt~~~~V~~~~~~-G~~vi 198 (295)
T 1kjw_A 120 DDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAHKFIEAGQYNSHLYGTSVQSVREVAEQ-GKHCI 198 (295)
T ss_dssp HHHHHHCTTTEECCCCEECSCCCTTCCBTTTBEECSCHHHHHHHHHTTCEEEEEEETTEEEEEEHHHHHHHHHT-TCEEE
T ss_pred HHHHhhCccceeeeeeecccCCCCccccCceeEecCCHHHHHHHHHCCCcEEEEEEcCcEeeeeHHHHHHHHhc-CCeEE
Confidence 99999999889999999998 6 99999999999999999999999999999999999999 99999
Q ss_pred EEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHHHHHHcCCcceEEEeCCCC
Q psy3835 1554 LDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGLKIECEHKHYISAVIPAGVN 1633 (1659)
Q Consensus 1554 Ldi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~~~e~~~~~~fd~vi~n~~~ 1633 (1659)
|||+++|+++|+...++|++|||.|||+++|++ ++ .| + +++++++++++|.++|..+.+.||++|+|| |
T Consensus 199 ldid~~g~~~l~~~~~~pi~IfI~pps~~~L~~-L~---~R----~--t~~~i~~rl~~a~~~e~~~~~~fd~vivNd-~ 267 (295)
T 1kjw_A 199 LDVSANAVRRLQAAHLHPIAIFIRPRSLENVLE-IN---KR----I--TEEQARKAFDRATKLEQEFTECFSAIVEGD-S 267 (295)
T ss_dssp ECCCTTHHHHHHHTTCCCEEEEECCSSHHHHHH-HC---TT----S--CHHHHHHHHHHHHHHHHHHGGGCSEEECCS-S
T ss_pred EEeCHHHHHHHHhcccCCeEEEEECCCHHHHHH-HH---hc----C--CHHHHHHHHHHHHHHHHhccccCeEEEECc-C
Confidence 999999999999999999999999999999998 54 23 3 567799999999888999999999999999 9
Q ss_pred HHHHHHHHHHHHHhhcCCceEEeCC
Q psy3835 1634 IAYMCTQIQTAVELEQSKTLWVPSL 1658 (1659)
Q Consensus 1634 ~~~~~~~l~~ii~~~~~~~~Wvp~~ 1658 (1659)
++.|+.+|+++|..++.+|+|||++
T Consensus 268 le~a~~~l~~ii~~~~~~~~Wvp~~ 292 (295)
T 1kjw_A 268 FEEIYHKVKRVIEDLSGPYIWVPAR 292 (295)
T ss_dssp HHHHHHHHHHHHHHHSCSEEEEECS
T ss_pred HHHHHHHHHHHHHhccCCCEEeeCC
Confidence 9999999999999999999999986
No 7
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=100.00 E-value=2.3e-39 Score=372.76 Aligned_cols=259 Identities=20% Similarity=0.291 Sum_probs=190.4
Q ss_pred CCCcceeeeccccCCCCCc-----cccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHHHHHHHHH
Q psy3835 1329 PGDSFYMRALFSRTGDLGD-----ALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKVEEELLLR 1403 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~~~-----~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~e~~~~~~ 1403 (1659)
....|||||+|||+|..++ +++|+|++||||||+++ .+.+||||++++..| ..|+|||+.++|+.....
T Consensus 35 k~~~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~---~d~~WWqar~~~~~g---~~GlIPS~~~~E~~~~~~ 108 (337)
T 4dey_A 35 KPVAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEK---FNNDWWIGRLVKEGC---EIGFIPSPVKLENMRLQH 108 (337)
T ss_dssp SCCCEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEE---CSSSEEEEEESSTTC---CCEEEECHHHHHHHHHHH
T ss_pred CCccEEEEEccccCCCCCCCCCcccccccccCCCEEEEEec---CCCCeEEEEECCCCC---CccEecCHHHHHHHHHhh
Confidence 3468999999999998765 35899999999999995 678999999997655 489999999999854432
Q ss_pred hhccccccccccccccccccccccccccchhhhccccCCCCccCCCCCCCcCccccccceeeeccCCCCCCCcEEEECCC
Q psy3835 1404 RSLGDLESDARRATRRSFFRRKKHQRSDSKELASFSNINLGWYSDSGTLNEDSVSLASYQRVIRLNSEPVLRPVILVGAL 1483 (1659)
Q Consensus 1404 ~~~~~~~~~~~~~~r~~~~~rkk~~r~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ye~V~~~~~~~~~RpvVl~Gp~ 1483 (1659)
.. + .+. ..|-.++| .+.++. . ...++|||.| +..|||||+||+
T Consensus 109 ~~----~--~~~---~~~~~~~~--------~~~~~~-------k-------~~~~~~Ye~v------p~~RPvvlvGP~ 151 (337)
T 4dey_A 109 EQ----R--AKE---FKLHSKEK--------RMPFFK-------K-------TEHTPPYDVV------PSMRPVVLVGPS 151 (337)
T ss_dssp HH----H--CC--------------------------------------------CCSEEEE------CSSCCEEEECSS
T ss_pred hh----c--ccc---CCCCcccc--------cccccc-------c-------CCCCCCcccc------CCCCceEEECCc
Confidence 11 0 000 01111111 112221 0 1356799999 467999999999
Q ss_pred h------HHHHHHHhhhCCCcccccccceec----------------CChHHHHHhccCCceEEEEEeCCeeeeecHHHH
Q psy3835 1484 S------DTVTDKLLQDFPDKFVRCAPEIMH----------------CPQAAMEKGLADNLFVDYRKKGAYFECTSVAAV 1541 (1659)
Q Consensus 1484 g------~~l~~~Ll~~~p~~f~~~v~~Ttr----------------vs~~~f~~~i~~~~flE~~~~~g~~YGts~~~V 1541 (1659)
+ +.+.++|+...|.+|..+|++| | +++..|++.+..+.|+| |++.++.|
T Consensus 152 ~~g~~~td~m~~~l~d~l~~~F~~~i~~t-R~~~d~~~~~r~~~~~~~~~~~~e~~~~~~~~~e--------v~seVe~i 222 (337)
T 4dey_A 152 LKGYEVTDMMQKALFDFLKHRFEGRISIT-RVTADISLAKRSVLNNPSKHAIIERSNTRSSLAE--------VQSEIERI 222 (337)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHTTTSEEEE-EECSCGGGC-------------------CCCHHH--------HHHHHHHH
T ss_pred cccchhHHHHHHHHHHhhHHhcCCccceE-eecchhhhcchhhhhcccchhhhcccccccchHH--------HHhHHHHH
Confidence 7 4677888888889999999876 4 23344444444444443 56788888
Q ss_pred HHHHHcCCCeEEEEcChh-HHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHHHHHHc
Q psy3835 1542 KDACDKNNAHVILDVSLA-GVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGLKIECEH 1620 (1659)
Q Consensus 1542 ~~v~~~~gk~~iLdi~~~-~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~~~e~~~ 1620 (1659)
.+++++ |++||||||+| |+++|+...++|++|||.|||+++|++|++ +|++.+++.++.+++.|.++...+
T Consensus 223 ~~v~~~-Gk~vILDIDvQnGa~qlk~~~~~~i~IFI~PPS~eeLe~RL~-------~RGt~~~~rl~~al~~ae~E~~~~ 294 (337)
T 4dey_A 223 FELART-LQLVVLDADTINHPAQLSKTSLAPIVVYVKISSPKVLQRLIK-------SRGKSQAKHLNVQMVAADKLAQCP 294 (337)
T ss_dssp HHHTTT-CCEEEEEETTCCSGGGTTTSSCCCEEEEECCSCHHHHHHHHH-------TTCHHHHTTHHHHHHHHHHHHHSC
T ss_pred HHHHhC-CCEEEEEeCcHHHHHHHHhcCCCCEEEEEECcCHHHHHHHHH-------hCCchHHHHHHHHHHHHHHHHhhC
Confidence 888889 99999999999 999999999999999999999999999988 566766666777777776644456
Q ss_pred CCcceEEEeCCCCHHHHHHHHHHHHHhh
Q psy3835 1621 KHYISAVIPAGVNIAYMCTQIQTAVELE 1648 (1659)
Q Consensus 1621 ~~~fd~vi~n~~~~~~~~~~l~~ii~~~ 1648 (1659)
.++|||+|+|| |++.||.+|+.||...
T Consensus 295 ~~~FDyvIVND-dLe~A~~~L~~iI~~~ 321 (337)
T 4dey_A 295 PELFDVILDEN-QLEDACEHLADYLEAY 321 (337)
T ss_dssp GGGCSEEECCS-SHHHHHHHHHHHHHHH
T ss_pred cccCCEEEECC-CHHHHHHHHHHHHHHH
Confidence 89999999999 9999999999999764
No 8
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=100.00 E-value=9.8e-34 Score=307.34 Aligned_cols=166 Identities=17% Similarity=0.301 Sum_probs=153.1
Q ss_pred CcEEEECCCh---HHHHHHHhhhCCCcccccccceec--------------CChHHHHHhccCCceEEEEEeCCeeeeec
Q psy3835 1475 RPVILVGALS---DTVTDKLLQDFPDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYFECTS 1537 (1659)
Q Consensus 1475 RpvVl~Gp~g---~~l~~~Ll~~~p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~YGts 1537 (1659)
|||||+|||| +||+++|++.+|+.|.++|||||| ||+++|++++++|.||||++|+||+|||+
T Consensus 2 RpIVi~GPSG~GK~Tl~~~L~~~~~~~~~~svs~TTR~pR~gE~~G~dY~Fvs~~eF~~~i~~g~flE~~~~~g~~YGt~ 81 (186)
T 1ex7_A 2 RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGST 81 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHhCCCCeEEEEEEeccCCCCCCcCCceeEeecHHHHHHHHHcCCEEEEEEEcCceeeee
Confidence 8999999998 999999999999999999999998 99999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEcChhHHHHHHhc-CCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHH-
Q psy3835 1538 VAAVKDACDKNNAHVILDVSLAGVERLHRQ-HVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGLK- 1615 (1659)
Q Consensus 1538 ~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~-~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~~- 1615 (1659)
+++|+.++++ |++||||++++|+.+|+.. .+.|++|||.|||.++|++|++ .|++++++++++++..|..
T Consensus 82 ~~~v~~~l~~-g~~vil~id~~g~~~~k~~~~~~~~~Ifi~pps~e~L~~RL~-------~Rg~e~~e~i~~Rl~~a~~e 153 (186)
T 1ex7_A 82 VASVKQVSKS-GKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLE-------GRGTETEESINKRLSAAQAE 153 (186)
T ss_dssp HHHHHHHHHH-TSEEEEECCHHHHHHHHTCGGGCCEEEEEECSCHHHHHHHHH-------HHCCSCHHHHHHHHHHHHHH
T ss_pred cceeeehhhC-CCEEEecCCHHHHHHHHHhcccCceEEEEeCCCHHHHHHHHH-------hcCCCCHHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999985 4589999999999999999998 5577899999999988754
Q ss_pred HHHHcCCcceEEEeCCCCHHHHHHHHHHHHHhhc
Q psy3835 1616 IECEHKHYISAVIPAGVNIAYMCTQIQTAVELEQ 1649 (1659)
Q Consensus 1616 ~e~~~~~~fd~vi~n~~~~~~~~~~l~~ii~~~~ 1649 (1659)
++....+.||++|+|| |++.|+.+|++||..|+
T Consensus 154 ~~~~~~~~fD~vIvNd-dle~a~~~l~~iI~aer 186 (186)
T 1ex7_A 154 LAYAETGAHDKVIVND-DLDKAYKELKDFIFAEK 186 (186)
T ss_dssp HHHHTTTCSSEEEECS-SHHHHHHHHHHHHTTCC
T ss_pred HhhccccCCcEEEECc-CHHHHHHHHHHHHHhcC
Confidence 3333456899999999 99999999999997753
No 9
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=99.97 E-value=1.6e-30 Score=283.71 Aligned_cols=164 Identities=18% Similarity=0.295 Sum_probs=145.5
Q ss_pred CCCCcEEEECCCh---HHHHHHHhhhCCCcccccccceec--------------CChHHHHHhccCCceEEEEEeCCeee
Q psy3835 1472 PVLRPVILVGALS---DTVTDKLLQDFPDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYFE 1534 (1659)
Q Consensus 1472 ~~~RpvVl~Gp~g---~~l~~~Ll~~~p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~Y 1534 (1659)
..+++|||+||+| +||+++|+..+|+.|.+++|+||| ++.++|++++.++.|+||++++||+|
T Consensus 17 ~~g~~ivl~GPSGaGKsTL~~~L~~~~~~~~~~~vs~TTR~p~~gE~~G~~y~fvs~~~f~~~i~~~~fle~~~~~~n~Y 96 (197)
T 3ney_A 17 QGRKTLVLIGASGVGRSHIKNALLSQNPEKFVYPVPYTTRPPRKSEEDGKEYHFISTEEMTRNISANEFLEFGSYQGNMF 96 (197)
T ss_dssp CSCCEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCCCTTCCTTSSCEECCHHHHHHHHHTTCEEEEEEETTEEE
T ss_pred CCCCEEEEECcCCCCHHHHHHHHHhhCCccEEeeecccccCCcCCeeccccceeccHHHhhhhhhhhhhhhhhhhhceec
Confidence 5678999999998 999999999999889999999998 89999999999999999999999999
Q ss_pred eecHHHHHHHHHcCCCeEEEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHH
Q psy3835 1535 CTSVAAVKDACDKNNAHVILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGL 1614 (1659)
Q Consensus 1535 Gts~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~ 1614 (1659)
||+.++|++++++ |++||||||++|+++|+...++|++|||.|||++.. +++.+.+.++ +.
T Consensus 97 Gt~~~~v~~~l~~-G~~vildid~qg~~~~~~~~~~~~~Ifi~Pps~~~~---------------~e~~~~i~~r---~~ 157 (197)
T 3ney_A 97 GTKFETVHQIHKQ-NKIAILDIEPQTLKIVRTAELSPFIVFIAPTDQGTQ---------------TEALQQLQKD---SE 157 (197)
T ss_dssp EEEHHHHHHHHHT-TCEEEEECCGGGHHHHCSTTTCEEEEEEEECCBSSC---------------CHHHHHHHHH---HH
T ss_pred ccchhhHHHHHhc-CCeEEEEECHHHHHHHHhcCCCceEEEEeCCCcccc---------------chHHHHHHHH---HH
Confidence 9999999999999 999999999999999999999999999999996321 2222334443 34
Q ss_pred HHHHHcCCcceEEEeCCCCHHHHHHHHHHHHHhhcCCceEE
Q psy3835 1615 KIECEHKHYISAVIPAGVNIAYMCTQIQTAVELEQSKTLWV 1655 (1659)
Q Consensus 1615 ~~e~~~~~~fd~vi~n~~~~~~~~~~l~~ii~~~~~~~~Wv 1655 (1659)
+++..|.+.||++|+|| |++.|+.+|+.+|..++++||||
T Consensus 158 ~~~~~~~~~fd~vivNd-~l~~a~~~l~~ii~~~~~~pqWv 197 (197)
T 3ney_A 158 AIRSQYAHYFDLSLVNN-GVDETLKKLQEAFDQACSSPQWV 197 (197)
T ss_dssp HHHHHHGGGCSEEEEES-CHHHHHHHHHHHHHHCCCCCC--
T ss_pred HHHHhhccCCCEEEECC-CHHHHHHHHHHHHHHccCCCCCC
Confidence 55667889999999999 99999999999999999999998
No 10
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.94 E-value=4e-25 Score=290.21 Aligned_cols=302 Identities=25% Similarity=0.458 Sum_probs=214.7
Q ss_pred cccceEEecCcCCCC------cCcccccC-----CCCCCCCCCEEEEECCEeCCCCChHHHHHHHHhcCCeEEEEEEeCC
Q psy3835 738 NGTGTILHPRRHKER------LPLSALLN-----NPPSYKVNDCIVRVNNLDCSNVSKRMVLETVRSSGTSALMVIRRRR 806 (1659)
Q Consensus 738 ~glG~~i~gg~~~~~------~~V~~v~p-----~~g~l~~GD~Il~VNg~~~~~~~~~~~~~~l~~~~~~v~l~v~R~~ 806 (1659)
.||||+|.||.+.++ +.|+.|.| +.|+|++||+|++|||+++.+++|.+++.+|+.+|..|.|+|.|.+
T Consensus 70 ~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 149 (721)
T 2xkx_A 70 SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRK 149 (721)
T ss_pred CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhccccccceEEEecc
Confidence 799999999987643 22888887 4566999999999999999999999999999999999999999986
Q ss_pred CCCcceEEEEEeccCCCCcCeEec-----------CceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHH
Q psy3835 807 VGARSLVTTQLQLNNSYDHGLTLE-----------SGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMA 875 (1659)
Q Consensus 807 ~~~~~~~~~~i~~~~~~~lG~~~~-----------~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~ 875 (1659)
+.......+++. ++..+|||++. .|++|..|.+||+|+++|+|++||+|++|||.+|.+ +++.+++.
T Consensus 150 ~~~~~~~~v~l~-k~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~-~~~~~~~~ 227 (721)
T 2xkx_A 150 PPAEKVMEIKLI-KGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLED-VMHEDAVA 227 (721)
T ss_pred cccccceeeeee-eecCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCC-CCHHHHHH
Confidence 543222233333 34567999884 478999999999999999999999999999999999 99999999
Q ss_pred HHhcCCCeEEEEEEccCCCCCCCCcccccccCCCCccCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy3835 876 LLSDSPDVLTITTLKPTSLGEHSPRVHRKSVNSSTQTMPLYVRYGDQPPPDSYQVPKTSTKSHDPAKPSPSSSGGGGKWD 955 (1659)
Q Consensus 876 ~l~~~~~~v~l~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ss~~~~g~~~ 955 (1659)
+|+..+..|.|.|.|..... .. . . .. | |..+
T Consensus 228 ~l~~~~~~v~l~V~R~g~~~----------~~-----~-~---~~-------------------~--p~~~--------- 258 (721)
T 2xkx_A 228 ALKNTYDVVYLKVAKPSNAY----------LS-----D-S---YA-------------------P--PDIT--------- 258 (721)
T ss_pred HHHcCCCeEEEEEEeCCccc----------cc-----C-C---CC-------------------C--CCcc---------
Confidence 99988899999998875310 00 0 0 00 0 0000
Q ss_pred ccccccccccccCCCCcCCCCCCCCCCCCCCchhhhhhhhccccccccCCCCCCCCCCCCCCCCCccccCCCCCCCCCCC
Q psy3835 956 SLREKMQGVRRRGGGEEGKRSNRNSSPPVTFEQEQVDAIAELDSFVHTHSPSDGSSPHYHKAPRSLASAHSHPGGPNNGA 1035 (1659)
Q Consensus 956 ~~~~~~~~~r~~~~~~~~~r~~~~~spp~~~~p~~~~~~~~~d~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 1035 (1659)
. ..+++. ..+...+ ..
T Consensus 259 -------------------~---~~s~~~--------------------------------------~~~~~~~----~~ 274 (721)
T 2xkx_A 259 -------------------T---SYSQHL--------------------------------------DNEISHS----SY 274 (721)
T ss_pred -------------------c---CCCCCc--------------------------------------ccccCCc----cc
Confidence 0 000000 0000000 00
Q ss_pred CCCCCCCCCccccCCCCCccccccCccccCCCCCccccCCCCCCCCCCcccccccCCCCCCCcceeecCCCCcCCCCCCC
Q psy3835 1036 GGTSYETSSYHSYDAAGTFPRKKENQRFRIPSNPSVAFKTSGTKMSNGSIEKTSERGSPMPTFHVEVLSPGLRQNKRNSL 1115 (1659)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~~~~~~~s~~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~ 1115 (1659)
.+..+ . ..++ +.. +. ...|.+
T Consensus 275 ~~~~~------------------~---~~~~--~~~-~~----------------~~~p~~------------------- 295 (721)
T 2xkx_A 275 LGTDY------------------P---TAMT--PTS-PR----------------RYSPVA------------------- 295 (721)
T ss_pred ccccc------------------c---ccCC--CCC-Cc----------------ccCCcc-------------------
Confidence 00000 0 0000 000 00 000000
Q ss_pred CCCCCCCCCCCCCeEEEEEecCCCCceEEEEecC-CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHH
Q psy3835 1116 PDYCCSHKPHPGELRRVHIDKSVEPLGIQIQCLD-SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAAS 1193 (1659)
Q Consensus 1116 ~~~~~~~~~~~~~~~~v~l~k~~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~ 1193 (1659)
....+.......++.|.|.+...+|||++.++. ..|++|..|.+||+|+++| |++||+|++|||.+|.++++.+++.
T Consensus 296 -~~~~~~~~~~~~~~~v~l~~~~~~lG~~i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~ 374 (721)
T 2xkx_A 296 -KDLLGEEDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAI 374 (721)
T ss_pred -cccccccccccceEEEEEEECCCCccEEEeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHH
Confidence 000011112346788999998889999998774 4699999999999999999 9999999999999999999999999
Q ss_pred HHHhCCCeEEEEEEecCCccc
Q psy3835 1194 VLRQCGNSITMLVQYSPDKYH 1214 (1659)
Q Consensus 1194 ~l~~~~~~v~l~v~r~~~~~~ 1214 (1659)
+++..+..|+|+|.|++..+.
T Consensus 375 ~l~~~~~~v~L~v~r~~~~~~ 395 (721)
T 2xkx_A 375 ALKNAGQTVTIIAQYKPEEYS 395 (721)
T ss_pred HHHhcCCeEEEEEEeCchhhh
Confidence 999989999999999887554
No 11
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=99.87 E-value=3.7e-22 Score=219.20 Aligned_cols=165 Identities=18% Similarity=0.292 Sum_probs=126.1
Q ss_pred CCcEEEECCCh---HHHHHHHhhhCCCcccccccceec--------------CChHHHHHhccCCceEEEEEeCCeeeee
Q psy3835 1474 LRPVILVGALS---DTVTDKLLQDFPDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYFECT 1536 (1659)
Q Consensus 1474 ~RpvVl~Gp~g---~~l~~~Ll~~~p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~YGt 1536 (1659)
+++|+|+||+| +||++.|+..+|..|+.++++||| ++.+.|..++..+.|+||.++++++|||
T Consensus 1 ~~ii~l~GpsGaGKsTl~~~L~~~~~~~~~~~~~~~tr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~yg~ 80 (186)
T 3a00_A 1 SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGS 80 (186)
T ss_dssp CCCEEEESSSSSSHHHHHHHHHHHCGGGEECCCEEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhCCccceEEeeccccCCCCCccCCeeeeecCHHHHHHHHhhcceeeEEEEeceeccC
Confidence 47899999998 999999999998889999999998 5788999999999999999999999999
Q ss_pred cHHHHHHHHHcCCCeEEEEcChhHHHHHHh-cCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHH
Q psy3835 1537 SVAAVKDACDKNNAHVILDVSLAGVERLHR-QHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGLK 1615 (1659)
Q Consensus 1537 s~~~V~~v~~~~gk~~iLdi~~~~~~~l~~-~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~~ 1615 (1659)
+.+.|+++++. |++||||++++|+..|+. ..+.+++|||.||+.+.|++|+. .|++.+++.+++++..+..
T Consensus 81 ~~~~i~~~l~~-g~~~il~~~~~g~~~l~~~~~~~~~~i~i~~p~~~~l~~Rl~-------~Rg~~~~~~i~~rl~~~~~ 152 (186)
T 3a00_A 81 TVASVKQVSKS-GKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLE-------GRGTETEESINKRLSAAQA 152 (186)
T ss_dssp EHHHHHHHHHT-TCEEEEECCHHHHHHHHTCGGGCCEEEEEECSCC----------------------------------
T ss_pred cHHHHHHHHHc-CCeEEEEEcHHHHHHHHHhcCCCeEEEEEECcCHHHHHHHHH-------hcCCCCHHHHHHHHHHHHH
Confidence 99999999999 999999999999999998 88899999999999999998877 5567788889999988764
Q ss_pred HHHHcC--CcceEEEeCCCCHHHHHHHHHHHHHhh
Q psy3835 1616 IECEHK--HYISAVIPAGVNIAYMCTQIQTAVELE 1648 (1659)
Q Consensus 1616 ~e~~~~--~~fd~vi~n~~~~~~~~~~l~~ii~~~ 1648 (1659)
+..+. ++||++|+|| +++.++.+|..+|..+
T Consensus 153 -~~~~~~~~~~d~vi~nd-~~~~a~~~l~~~i~~~ 185 (186)
T 3a00_A 153 -ELAYAETGAHDKVIVND-DLDKAYKELKDFIFAE 185 (186)
T ss_dssp -------CCCCSEEEECS-SHHHHHHHHHHHHTTC
T ss_pred -HHHhhcccCCcEEEECc-CHHHHHHHHHHHHHhc
Confidence 44444 8999999999 9999999999999654
No 12
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=99.87 E-value=4.8e-22 Score=222.30 Aligned_cols=169 Identities=15% Similarity=0.194 Sum_probs=149.6
Q ss_pred CCCcEEEECCCh---HHHHHHHhhhCCCcccccccceec--------------CChHHHHHhccCCceEEEEEeCCeeee
Q psy3835 1473 VLRPVILVGALS---DTVTDKLLQDFPDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYFEC 1535 (1659)
Q Consensus 1473 ~~RpvVl~Gp~g---~~l~~~Ll~~~p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~YG 1535 (1659)
.++.|+|+||+| +||++.|+..+|..|..++++||| ++.+.|..++..+.|+||++++||+||
T Consensus 7 ~g~~i~l~GpsGsGKsTl~~~L~~~~~~~~~~~~~~~tr~~~~~e~~g~~y~~~~~~~f~~~~~~~~~le~~~~~~~~yg 86 (208)
T 3tau_A 7 RGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYG 86 (208)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHSTTCCCEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEE
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhCCCcEEEEEecccccCcCcccCCceeEEecHHHHHHHHhcCcEEEEEEEccccCC
Confidence 467899999998 999999999888669999999998 688999999999999999999999999
Q ss_pred ecHHHHHHHHHcCCCeEEEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHH
Q psy3835 1536 TSVAAVKDACDKNNAHVILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGLK 1615 (1659)
Q Consensus 1536 ts~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~~ 1615 (1659)
|+...|+++++. |++||||++++|+..++...+.|++|||.|||.+.|++|+. .|++.++++++++++.+..
T Consensus 87 ~~~~~i~~~l~~-g~~vild~~~~g~~~~~~~~~~~~~i~i~~ps~~~l~~Rl~-------~R~~~~~e~i~~Rl~~~~~ 158 (208)
T 3tau_A 87 TPLEYVEEKLAA-GVDIFLEIEVQGAMQVRKAMPEGIFIFLTPPDLSELKNRII-------GRGTESMEVVEERMETAKK 158 (208)
T ss_dssp EEHHHHHHHHHT-TCCEEEECCHHHHHHHHHHCTTSEEEEEECTTTTTSSCC--------------CCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHc-CCeEEEEeeHHHHHHHHHhCCCeEEEEEeCCCHHHHHHHHH-------hcCCCCHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999887766 5566778899999988854
Q ss_pred HHHHcCCcceEEEeCCCCHHHHHHHHHHHHHhhcCC
Q psy3835 1616 IECEHKHYISAVIPAGVNIAYMCTQIQTAVELEQSK 1651 (1659)
Q Consensus 1616 ~e~~~~~~fd~vi~n~~~~~~~~~~l~~ii~~~~~~ 1651 (1659)
|..+.+.||++|+|+ +++.++.+|..+|..++.+
T Consensus 159 -e~~~~~~~d~vivN~-~~~~~~~~l~~~i~~~~~~ 192 (208)
T 3tau_A 159 -EIEMMASYDYAVVND-VVANAVQKIKGIVETEHLK 192 (208)
T ss_dssp -HHHHGGGSSEEEECS-SHHHHHHHHHHHHHHHHTB
T ss_pred -HHHhhccCCEEEECc-CHHHHHHHHHHHHHHHHHh
Confidence 667778999999999 9999999999999887554
No 13
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.86 E-value=9e-21 Score=209.97 Aligned_cols=171 Identities=24% Similarity=0.352 Sum_probs=149.2
Q ss_pred CeEEEEEecCCCCceEEEEecC-------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCC
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD-------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCG 1199 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~-------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 1199 (1659)
+.+.|.|.+.+.+|||+|.++. ..|++|..|.|+|||+++| |++||+|++|||.++.++++.++..+++.++
T Consensus 5 ~~~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 84 (196)
T 3gsl_A 5 EYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG 84 (196)
T ss_dssp EEEEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred EEEEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 5688999999999999999983 4599999999999999999 9999999999999999999999999999999
Q ss_pred CeEEEEEEecCCccccccCCCCCCCcccccCCCCCCCCeEEEEecCCcCccCeEEecCC-------CcceEEEEeCCCCh
Q psy3835 1200 NSITMLVQYSPDKYHELEGSGSSSAENESVSGRGSGEPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSL 1272 (1659)
Q Consensus 1200 ~~v~l~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~lGi~l~gg~-------~~gi~V~~V~~gs~ 1272 (1659)
..++|+|.|.+... .....+.+.+... +|||++.++. ..|++|..|.+|||
T Consensus 85 ~~v~l~v~r~~~~~---------------------~~~~~v~l~~~~~-~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~ 142 (196)
T 3gsl_A 85 SIVRLYVMRRKPPA---------------------EKVMEIKLIKGPK-GLGFSIAGGVGNQHIPGDNSIYVTKIIEGGA 142 (196)
T ss_dssp SEEEEEEEEECCCC---------------------EEEEEEEEEEBTT-BSCEEEEESBTSCSBTTBCCEEEEEECTTSH
T ss_pred CcEEEEEEecCCCc---------------------cccEEEEEecCCC-CceEEEEccCCCcCCCCCCCEEEEEECCCCh
Confidence 99999999876411 1123455666554 8999998653 24899999999999
Q ss_pred hhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1273 GYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1273 A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
|+++| |++||+|++|||+++.++++.+++..++..++.+.|+|.|+..
T Consensus 143 A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 143 AHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSN 191 (196)
T ss_dssp HHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEEEEEEEEEESC
T ss_pred HHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 99988 9999999999999999999999999999888999999998743
No 14
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.86 E-value=1.4e-20 Score=210.19 Aligned_cols=173 Identities=16% Similarity=0.201 Sum_probs=150.1
Q ss_pred CCCCeEEEEEecCCCCceEEEEecCC----CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCC--CCHHHHHHHHHh
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLDS----GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRS--ATYQLAASVLRQ 1197 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~~----~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~--~~~~~~~~~l~~ 1197 (1659)
.+++...|.+.+.+.+|||+|.++.+ .|++|..|.++|||+++| |++||+|++|||.++.+ +++.+++.+++.
T Consensus 15 ~~~~~~~v~~~~~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~ 94 (206)
T 3r0h_A 15 KPNKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHT 94 (206)
T ss_dssp CTTSCEEEEEECTTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHS
T ss_pred CCCCEEEEEEEeCCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHh
Confidence 35678899999999999999998732 489999999999999999 99999999999999999 999999999998
Q ss_pred CCCe-EEEEEEecCCccccccCCCCCCCcccccCCCCCCCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhc
Q psy3835 1198 CGNS-ITMLVQYSPDKYHELEGSGSSSAENESVSGRGSGEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSA 1276 (1659)
Q Consensus 1198 ~~~~-v~l~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~ 1276 (1659)
++.. +.|+|.|.+... .....+.+.+.....|||++.++ ..|++|..|.+||+|+++
T Consensus 95 ~~~~~v~l~v~R~~~~~---------------------~~~~~v~l~~~~~~~lG~~~~~~-~~gv~V~~V~~gs~A~~a 152 (206)
T 3r0h_A 95 TYEKAVTLTVFRADPPE---------------------LEKFNVDLMKKAGKELGLSLSPN-EIGCTIADLIQGQYPEID 152 (206)
T ss_dssp CCSSEEEEEEECCSSCC---------------------EEEEEEEEECCTTCCCCEEEEEC-SSCEEEEEECTTSCHHHH
T ss_pred cCCCceEEEEEecccCC---------------------CcEEEEEEecCCCCccCeEEEcC-CceEEEEEECCCChHHHc
Confidence 8887 999999876521 11233555565556899999864 468999999999999998
Q ss_pred C-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCc
Q psy3835 1277 G-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1277 g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~ 1319 (1659)
| |++||+|++|||+++.++++.+++..++..++.+.|+|.|..
T Consensus 153 G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~R~~ 196 (206)
T 3r0h_A 153 SKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPK 196 (206)
T ss_dssp HHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEEC
T ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 7 999999999999999999999999999888999999998853
No 15
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=99.85 E-value=8.1e-21 Score=207.26 Aligned_cols=160 Identities=18% Similarity=0.308 Sum_probs=139.5
Q ss_pred CCCCcEEEECCCh---HHHHHHHhhhCCCcccccccceec--------------CChHHHHHhccCCceEEEEEeCCeee
Q psy3835 1472 PVLRPVILVGALS---DTVTDKLLQDFPDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYFE 1534 (1659)
Q Consensus 1472 ~~~RpvVl~Gp~g---~~l~~~Ll~~~p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~Y 1534 (1659)
...++++|+||+| +||++.|+..+|..|..++++||| ++.+.|..++..+.|+||+.+++|+|
T Consensus 3 ~~g~~i~i~GpsGsGKSTL~~~L~~~~~~~~~~~i~~ttr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~y 82 (180)
T 1kgd_A 3 HMRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDAMY 82 (180)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCC---CCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhCCccEEEeeeccCCCCCccccCCCeeEEeCHHHHHHHHHcCCceEEEEEcCccc
Confidence 4568999999998 999999999888668889999997 68889999999999999999999999
Q ss_pred eecHHHHHHHHHcCCCeEEEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHH
Q psy3835 1535 CTSVAAVKDACDKNNAHVILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGL 1614 (1659)
Q Consensus 1535 Gts~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~ 1614 (1659)
|++.++|++++++ |++||||++++|+..++...+.+++|||.|||++.|++ | ++.++++.....
T Consensus 83 g~~~~~i~~~l~~-g~~vil~id~~g~~~~~~~~~~~~~ifi~~p~~~~l~~-----------R----~~~i~r~~~~~~ 146 (180)
T 1kgd_A 83 GTKLETIRKIHEQ-GLIAILDVEPQALKVLRTAEFAPFVVFIAAPTITPGLN-----------E----DESLQRLQKESD 146 (180)
T ss_dssp EEEHHHHHHHHHT-TCEEEEECCGGGHHHHSSTTTCEEEEEEECCSCCTTSC-----------C----SHHHHHHHHHHH
T ss_pred cccHHHHHHHHHC-CCeEEEEECHHHHHHHHHhCCCcEEEEEECCCHHHHHh-----------h----HHHHHHHHHHHH
Confidence 9999999999999 99999999999999999877889999999999887652 2 345644444444
Q ss_pred HHHHHcCCcceEEEeCCCCHHHHHHHHHHHHHhh
Q psy3835 1615 KIECEHKHYISAVIPAGVNIAYMCTQIQTAVELE 1648 (1659)
Q Consensus 1615 ~~e~~~~~~fd~vi~n~~~~~~~~~~l~~ii~~~ 1648 (1659)
.++..|.++||++|+|+ +++.|+++|..+|...
T Consensus 147 ~~~~~~~~~~d~~i~n~-~~~~~~~~l~~~i~~~ 179 (180)
T 1kgd_A 147 ILQRTYAHYFDLTIINN-EIDETIRHLEEAVELV 179 (180)
T ss_dssp HHHHHHGGGCSEEEECS-SHHHHHHHHHHHHHHH
T ss_pred HHHHhhhCCCcEEEECc-CHHHHHHHHHHHHHHh
Confidence 56557889999999999 9999999999999754
No 16
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=99.83 E-value=9.9e-20 Score=204.03 Aligned_cols=170 Identities=12% Similarity=0.140 Sum_probs=151.2
Q ss_pred CCCCcEEEECCCh---HHHHHHHhhhCCC-cccccccceec--------------CChHHHHHhccCCceEEEEEeCCee
Q psy3835 1472 PVLRPVILVGALS---DTVTDKLLQDFPD-KFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYF 1533 (1659)
Q Consensus 1472 ~~~RpvVl~Gp~g---~~l~~~Ll~~~p~-~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~ 1533 (1659)
+..++++|+||+| +||++.|+...|- .|..+|++||| ++.+.|..++.+|.|+||..++|++
T Consensus 14 ~~G~ii~l~GpsGsGKSTLlk~L~g~~~p~~~~g~v~~ttr~~~~~e~~gi~y~fq~~~~f~~~~~~~~f~E~~~~~~~~ 93 (219)
T 1s96_A 14 AQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNY 93 (219)
T ss_dssp -CCCEEEEECCTTSCHHHHHHHHHHHSCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEE
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhccCCCCceEEEEEecCCCCCcccccCceEEECCHHHHHHHHhcCHHHHHHHHHhcc
Confidence 4678999999998 9999999988762 47778999996 6888999999999999999999999
Q ss_pred eeecHHHHHHHHHcCCCeEEEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHH
Q psy3835 1534 ECTSVAAVKDACDKNNAHVILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHG 1613 (1659)
Q Consensus 1534 YGts~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a 1613 (1659)
|||+.+.|+++++. |+.||||+|++++.+++.....+++|||.||+++.|+.++. .++..+.+++.+++.+|
T Consensus 94 yg~~~~~v~~~l~~-G~illLDLD~~~~~~i~~~l~~~~tI~i~th~~~~l~~Rl~-------~rG~~~~e~i~~rl~~a 165 (219)
T 1s96_A 94 YGTSREAIEQVLAT-GVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLR-------GRGQDSEEVIAKRMAQA 165 (219)
T ss_dssp EEEEHHHHHHHHTT-TCEEEEECCHHHHHHHHHHCTTCEEEEEECSSHHHHHHHHH-------TTSCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhc-CCeEEEEECHHHHHHHHHHccCCEEEEEECCCHHHHHHHHH-------HcCCCCHHHHHHHHHHH
Confidence 99999999999999 99999999999999999876678999999999999999876 45677889999999887
Q ss_pred HHHHHHcCCcceEEEeCCCCHHHHHHHHHHHHHhhcCC
Q psy3835 1614 LKIECEHKHYISAVIPAGVNIAYMCTQIQTAVELEQSK 1651 (1659)
Q Consensus 1614 ~~~e~~~~~~fd~vi~n~~~~~~~~~~l~~ii~~~~~~ 1651 (1659)
.. |..+.+.||++|+|| |++.|+.+|+.+|..+..+
T Consensus 166 ~~-e~~~~~~~d~~i~Nd-~l~~a~~~l~~ii~~~~~~ 201 (219)
T 1s96_A 166 VA-EMSHYAEYDYLIVND-DFDTALTDLKTIIRAERLR 201 (219)
T ss_dssp HH-HHTTGGGSSEEEECS-SHHHHHHHHHHHHHHHHTB
T ss_pred HH-HHhhccCCCEEEECc-CHHHHHHHHHHHHHHHHhh
Confidence 53 677778999999999 9999999999999876543
No 17
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.83 E-value=1.6e-20 Score=207.96 Aligned_cols=184 Identities=23% Similarity=0.425 Sum_probs=140.2
Q ss_pred CCcceeEEEEEeccCCCCCCccCeeecCCCCCCCCCCCccEEEEeeccCCcc--CCcccccceeeeeccc-cchhhhh-H
Q psy3835 56 LQEWDTEVLDMNLTNLSPNEALGLELVGGRDDPFYPNDSSIYVSNIVKGSVT--DGKLKKKEEVARIKKQ-CEDMNQE-K 131 (1659)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~p~~~~d~~i~v~~v~~g~~a--~g~l~~~d~i~~vn~~-~~~~~~~-~ 131 (1659)
+.+|+++.+++..+ ..||||.|.||.++|+++++.|+||+.|.+||+| .|+|++||+|++|||. +.+++|. +
T Consensus 1 s~~~~~~~v~l~~~----~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~ 76 (196)
T 3gsl_A 1 SGSMEYEEITLERG----NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAA 76 (196)
T ss_dssp --CEEEEEEEEECB----TTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHH
T ss_pred CCCcEEEEEEEEEC----CCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 35788888877752 4689999999999999999999999999999977 6789999999999999 9988886 4
Q ss_pred HHHHHhhcchhHHHHhhcccceeeeehhhHHHHHHHhhhccchhHHHHHhhcccccceecceecccCCCC---Ccccccc
Q psy3835 132 NTALRERNGLKQQCTAAIRQWDIALRERNEYQEALAKVQQQHEDAVKEINTAMAVTNYLDGLQLNNSYDH---GLTLESG 208 (1659)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---g~~~~~~ 208 (1659)
+.+ ++.....+.|+|.|+.+..+.. . .+ ...+...+|++...+.. ......|
T Consensus 77 ~~~----------~~~~g~~v~l~v~r~~~~~~~~------~-----~v----~l~~~~~~lG~~~~~~~~~~~~~~~~g 131 (196)
T 3gsl_A 77 VEA----------LKEAGSIVRLYVMRRKPPAEKV------M-----EI----KLIKGPKGLGFSIAGGVGNQHIPGDNS 131 (196)
T ss_dssp HHH----------HHTSCSEEEEEEEEECCCCEEE------E-----EE----EEEEBTTBSCEEEEESBTSCSBTTBCC
T ss_pred HHH----------HHhCCCcEEEEEEecCCCcccc------E-----EE----EEecCCCCceEEEEccCCCcCCCCCCC
Confidence 333 3334567888887755211100 0 00 00112223444332222 2334578
Q ss_pred eEEEEeCCCCcccccCCcCCCcEEEEeCCcccCCCCCHHHHHHHhhcCCCeEEEEEecCCC
Q psy3835 209 LYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDSPDVLTITTLKPTS 269 (1659)
Q Consensus 209 ~~v~~i~~g~~a~~dg~l~~gd~i~~in~~~~~~~~s~~e~~~~l~~~~~~~~i~~~k~~~ 269 (1659)
+||++|.+||+|++.|+|++||+|++|||+++.++ ++.++..+|+.+++.++|+|.|+..
T Consensus 132 v~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~-~~~~~~~~l~~~~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 132 IYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDV-MHEDAVAALKNTYDVVYLKVAKPSN 191 (196)
T ss_dssp EEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSC-BHHHHHHHHHSCCEEEEEEEEEESC
T ss_pred EEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCC-CHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 99999999999999999999999999999999998 5999999999999999999998765
No 18
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.82 E-value=4e-19 Score=197.28 Aligned_cols=180 Identities=23% Similarity=0.327 Sum_probs=146.9
Q ss_pred CCeEEEEEecC-CCCceEEEEecC--CCcEEEEEeCCCChhhhc-CCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeE
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCLD--SGGVFVSTVSEHSLASQV-GLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSI 1202 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~-GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 1202 (1659)
..++.|.+.+. ..+|||+|.++. ..|++|..|.++|||+++ ||++||+|++|||.++.+++|.++..+++.++..|
T Consensus 6 ~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 85 (200)
T 2qt5_A 6 KGSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERV 85 (200)
T ss_dssp EEEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEE
T ss_pred CCCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 45678888876 689999999873 468999999999999999 89999999999999999999999999999889999
Q ss_pred EEEEEecCCccccccCCCCCCCcccccCCCCCCCCeEEEEecCCcCccCeEEecCC------CcceEEEEeCCCChhhhc
Q psy3835 1203 TMLVQYSPDKYHELEGSGSSSAENESVSGRGSGEPRFLMIETRKCSNLGISLVGGN------AVGIYVHSVQSGSLGYSA 1276 (1659)
Q Consensus 1203 ~l~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~lGi~l~gg~------~~gi~V~~V~~gs~A~~~ 1276 (1659)
.|.|.|+..... . ... ........+.+.+. ...|||.+.++. ..|++|..|.++|+|+++
T Consensus 86 ~l~v~R~~~~~~-~------~g~------~~~~~~~~v~l~~~-~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~a 151 (200)
T 2qt5_A 86 VLEVEYELPPVS-I------QGS------SVMFRTVEVTLHKE-GNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADRE 151 (200)
T ss_dssp EEEEEEECCCCC-C------CCS------SEEEEEEEEEEECB-TTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHH
T ss_pred EEEEeccCCCcc-c------CCC------ccceeEEEEEEecC-CCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHc
Confidence 999998754210 0 000 00001223444443 458999988653 358999999999999999
Q ss_pred C-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1277 G-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1277 g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
| |++||+|++|||+++.++++.++..++...+..+.|+|.|+..
T Consensus 152 G~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 196 (200)
T 2qt5_A 152 GTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLIEYDVS 196 (200)
T ss_dssp CCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEEEEEE
T ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 8 9999999999999999999999999998888899999999754
No 19
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=99.81 E-value=9.3e-19 Score=195.07 Aligned_cols=169 Identities=15% Similarity=0.231 Sum_probs=148.2
Q ss_pred CCCCcEEEECCCh---HHHHHHHhhhCCCcccccccceec--------------CChHHHHHhccCCceEEEEEeCCeee
Q psy3835 1472 PVLRPVILVGALS---DTVTDKLLQDFPDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYFE 1534 (1659)
Q Consensus 1472 ~~~RpvVl~Gp~g---~~l~~~Ll~~~p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~Y 1534 (1659)
..+++|+|+||+| +||.++|...+|..|..+++|||| ++.++|..++.+|.|+||+++.|++|
T Consensus 10 ~~~~~i~l~G~sGsGKsTl~~~L~~~~~~~~~~~~~~ttR~~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (204)
T 2qor_A 10 ARIPPLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDYYFVDKDDFERKLKEGQFLEFDKYANNFY 89 (204)
T ss_dssp CCCCCEEEECCTTSCHHHHHHHHHHHCTTTEEECCEEECSCCCTTCCBTTTEEECCHHHHHHHHHTTCEEEEEEETTEEE
T ss_pred ccCCEEEEECCCCCCHHHHHHHHHHhCccceeeeeeecCCCCCCCCCCCcceeeCCHHHHHHHHHcCCCEEeHHhCCCee
Confidence 4568899999998 999999999887668889999998 57889999999999999999999999
Q ss_pred eecHHHHHHHHHcCCCeEEEEcChhHHHHHHhcCC--ccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHH
Q psy3835 1535 CTSVAAVKDACDKNNAHVILDVSLAGVERLHRQHV--YPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEH 1612 (1659)
Q Consensus 1535 Gts~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~~--~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 1612 (1659)
|++.+.|+.+++. |+.||+|++++|+..++...+ .+++|||.|+|.+.|.+|+. .|+..+++.+++++..
T Consensus 90 ~~~~~~i~~~l~~-g~~vi~d~~~~~~~~l~~~~~~~~~~~i~l~~~s~e~l~~Rl~-------~R~~~~~~~i~~rl~~ 161 (204)
T 2qor_A 90 GTLKSEYDLAVGE-GKICLFEMNINGVKQLKESKHIQDGIYIFVKPPSIDILLGRLK-------NRNTEKPEEINKRMQE 161 (204)
T ss_dssp EEEHHHHHHHHHT-TCEEEEECCHHHHHHHHHCSSCSCCEEEEEECSCHHHHHHHHH-------TCTTSCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHc-CCeEEEEECHHHHHHHHHhcCCCCeEEEEEcCCCHHHHHHHHH-------HcCCCCHHHHHHHHHH
Confidence 9999999999999 999999999999999987765 67999999999999999887 3445577788888877
Q ss_pred HHHHHHH--cCCcceEEEeCCCCHHHHHHHHHHHHHhhcC
Q psy3835 1613 GLKIECE--HKHYISAVIPAGVNIAYMCTQIQTAVELEQS 1650 (1659)
Q Consensus 1613 a~~~e~~--~~~~fd~vi~n~~~~~~~~~~l~~ii~~~~~ 1650 (1659)
+.. +.. |..+||++|+|+ +++.++++|..+|..+..
T Consensus 162 ~~~-~~~~~~~~~~d~vi~n~-~~e~~~~~i~~~i~~~~~ 199 (204)
T 2qor_A 162 LTR-EMDEADKVGFNYFIVND-DLARTYAELREYLLGSYP 199 (204)
T ss_dssp HHH-HHHHHHHHTCSEEEECS-SHHHHHHHHHHHHHHHCT
T ss_pred HHH-HHHHhhhccCcEEEECc-CHHHHHHHHHHHHHHHhh
Confidence 643 333 667899999999 999999999999987643
No 20
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.80 E-value=1.4e-18 Score=192.16 Aligned_cols=176 Identities=22% Similarity=0.364 Sum_probs=147.7
Q ss_pred CCeEEEEEecCC-CCceEEEEec------CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC
Q psy3835 1127 GELRRVHIDKSV-EPLGIQIQCL------DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC 1198 (1659)
Q Consensus 1127 ~~~~~v~l~k~~-~~lG~sl~~~------~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 1198 (1659)
.+.+.|.+.+.. .+|||++.++ ...|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..
T Consensus 5 ~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 84 (196)
T 1p1d_A 5 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 84 (196)
T ss_dssp CEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTC
T ss_pred cEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 467889999984 8999999997 24589999999999999999 999999999999999999999999999876
Q ss_pred --CCeEEEEEEecCCccccccCCCCCCCcccccCCCCCCCCeEEEEecCCcCccCeEEecCC----CcceEEEEeCCCCh
Q psy3835 1199 --GNSITMLVQYSPDKYHELEGSGSSSAENESVSGRGSGEPRFLMIETRKCSNLGISLVGGN----AVGIYVHSVQSGSL 1272 (1659)
Q Consensus 1199 --~~~v~l~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~lGi~l~gg~----~~gi~V~~V~~gs~ 1272 (1659)
+..+.|.|.|++.... ++ ......+.+.+.....|||++.... ..|++|..|.++||
T Consensus 85 ~~g~~v~l~v~R~~~~~~-~~----------------~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~ 147 (196)
T 1p1d_A 85 SITSKVTLEIEFDVAESV-IP----------------SSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSV 147 (196)
T ss_dssp CSSSEEEEEEEECSCSCC-BC----------------CSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSH
T ss_pred CCCCeEEEEEEecCCCCC-CC----------------CCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCc
Confidence 7899999999875211 00 0123445665545567999998752 35899999999999
Q ss_pred hhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCc
Q psy3835 1273 GYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1273 A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~ 1319 (1659)
|+++| |++||+|++|||.++.++++.+....+...+..+.|.|.|+.
T Consensus 148 A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (196)
T 1p1d_A 148 AHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKDE 195 (196)
T ss_dssp HHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEEEEEECCC
T ss_pred HHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence 99999 999999999999999998888888888777899999999863
No 21
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=99.78 E-value=3.1e-18 Score=189.72 Aligned_cols=165 Identities=20% Similarity=0.280 Sum_probs=147.9
Q ss_pred CCcEEEECCCh---HHHHHHHhhhCCCcccccccceec--------------CChHHHHHhccCCceEEEEEeCCeeeee
Q psy3835 1474 LRPVILVGALS---DTVTDKLLQDFPDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYFECT 1536 (1659)
Q Consensus 1474 ~RpvVl~Gp~g---~~l~~~Ll~~~p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~YGt 1536 (1659)
+++++|+||+| +||++.|+..+|..|+++++|||| ++.+.|..++..+.|++|+.+.+|+||+
T Consensus 4 g~~i~lvGpsGaGKSTLl~~L~~~~~~~~~~~v~~ttr~~~~g~~~g~~~~~~~~~~~~~~i~~~~~l~~~~~~~n~~g~ 83 (198)
T 1lvg_A 4 PRPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSGNLYGT 83 (198)
T ss_dssp -CCEEEECCTTSSHHHHHHHHHHHHTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETTEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhCchhceeeeeeeccCCCCcccCCceEEEccHHHHHHHHHcCCCEeeeeecCccCCC
Confidence 57899999998 999999998888889999999986 6889999999999999999999999999
Q ss_pred cHHHHHHHHHcCCCeEEEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHHH
Q psy3835 1537 SVAAVKDACDKNNAHVILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGLKI 1616 (1659)
Q Consensus 1537 s~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~~~ 1616 (1659)
+.+.|+++++. |+.|+++++++|+..++...+.|.+|||.||++..|.++.. .++..+++.+++++..+..
T Consensus 84 ~~~~i~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~p~~~ilde~~~-------~~d~~~e~~i~~~l~~~~~- 154 (198)
T 1lvg_A 84 SKEAVRAVQAM-NRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLEQRLR-------LRNTETEESLAKRLAAART- 154 (198)
T ss_dssp EHHHHHHHHHT-TCEEEEECCHHHHHHHTTSSCCCEEEEEECSCHHHHHHHHH-------HHTCSCHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHc-CCcEEEECCHHHHHHHHhcCCCcEEEEEeCCCHHHHHHHHH-------hcCCCCHHHHHHHHHHHHH-
Confidence 99999999999 99999999999999998877889999999999999999877 4467788899999877654
Q ss_pred HHHcC---CcceEEEeCCCCHHHHHHHHHHHHHhh
Q psy3835 1617 ECEHK---HYISAVIPAGVNIAYMCTQIQTAVELE 1648 (1659)
Q Consensus 1617 e~~~~---~~fd~vi~n~~~~~~~~~~l~~ii~~~ 1648 (1659)
+..+. +.||++|+|+ +++.++.+|..+|..+
T Consensus 155 ~~~~a~~~~~~D~iivnd-~le~a~~~l~~ii~~~ 188 (198)
T 1lvg_A 155 DMESSKEPGLFDLVIIND-DLDKAYATLKQALSEE 188 (198)
T ss_dssp HTTGGGSTTTCSEEEECS-SHHHHHHHHHHHTHHH
T ss_pred HHHHhhccCCceEEEECC-CHHHHHHHHHHHHHHH
Confidence 44444 6899999999 9999999999999765
No 22
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.77 E-value=2.4e-18 Score=192.00 Aligned_cols=156 Identities=15% Similarity=0.211 Sum_probs=132.1
Q ss_pred cccceEEecCcCCCC---cCcccccC-----CCCCCCCCCEEEEECCEeCCC--CChHHHHHHHHhcCCe-EEEEEEeCC
Q psy3835 738 NGTGTILHPRRHKER---LPLSALLN-----NPPSYKVNDCIVRVNNLDCSN--VSKRMVLETVRSSGTS-ALMVIRRRR 806 (1659)
Q Consensus 738 ~glG~~i~gg~~~~~---~~V~~v~p-----~~g~l~~GD~Il~VNg~~~~~--~~~~~~~~~l~~~~~~-v~l~v~R~~ 806 (1659)
.||||+|.+|.+... +.|..|.| +.|+|++||+|++|||+++.+ ++|.+++.+++.++.. +.|+|.|..
T Consensus 29 ~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~ 108 (206)
T 3r0h_A 29 KPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRAD 108 (206)
T ss_dssp SCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECCS
T ss_pred CCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEecc
Confidence 899999999887643 22888887 445699999999999999999 8999999999998888 999999986
Q ss_pred CCCcceEEEEEeccCCCCcCeEec---CceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcCCCe
Q psy3835 807 VGARSLVTTQLQLNNSYDHGLTLE---SGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDSPDV 883 (1659)
Q Consensus 807 ~~~~~~~~~~i~~~~~~~lG~~~~---~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~~~~ 883 (1659)
........+.+......+|||++. .|+||.+|.|||+|+++|+|++||+|++|||.+|.+ +++.+++.+|+..++.
T Consensus 109 ~~~~~~~~v~l~~~~~~~lG~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~-~~~~~~~~~l~~~~~~ 187 (206)
T 3r0h_A 109 PPELEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEG-LPFQVCYALFKGANGK 187 (206)
T ss_dssp SCCEEEEEEEEECCTTCCCCEEEEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTT-CCHHHHHHHHHTCCSE
T ss_pred cCCCcEEEEEEecCCCCccCeEEEcCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHcCCCe
Confidence 544333333333233468999883 689999999999999998899999999999999999 8999999999998899
Q ss_pred EEEEEEccCCC
Q psy3835 884 LTITTLKPTSL 894 (1659)
Q Consensus 884 v~l~v~r~~~~ 894 (1659)
+.|.|.|+.+.
T Consensus 188 v~L~V~R~~~~ 198 (206)
T 3r0h_A 188 VSMEVTRPKPT 198 (206)
T ss_dssp EEEEEEEECCC
T ss_pred EEEEEEeCCCC
Confidence 99999998753
No 23
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.74 E-value=1.4e-16 Score=171.21 Aligned_cols=159 Identities=28% Similarity=0.394 Sum_probs=133.6
Q ss_pred CeEEEEEecC-CCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh-CCCeEEEE
Q psy3835 1128 ELRRVHIDKS-VEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ-CGNSITML 1205 (1659)
Q Consensus 1128 ~~~~v~l~k~-~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~l~ 1205 (1659)
.++.|.+.+. ..+|||++... ..|++|..|.++|||+++||++||+|++|||.++.++++..+..+++. .+..+.|+
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~-~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~ 82 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSI-DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMT 82 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEE-TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEE
T ss_pred CCEEEEEEeCCCCcEeEEEEeC-CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEE
Confidence 5789999997 47899999875 578999999999999999999999999999999999999666677765 45699999
Q ss_pred EEecCCccccccCCCCCCCcccccCCCCCCCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEE
Q psy3835 1206 VQYSPDKYHELEGSGSSSAENESVSGRGSGEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRIL 1285 (1659)
Q Consensus 1206 v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il 1285 (1659)
|.+++. .+.+.+.+.....|||.+.. | +|..|.++|||+++||++||+|+
T Consensus 83 vr~~~~-------------------------~~~v~l~~~~~~~lG~~~~~----g-~v~~v~~~s~a~~aGl~~GD~I~ 132 (166)
T 1w9e_A 83 IRDRPF-------------------------ERTITMHKDSTGHVGFIFKN----G-KITSIVKDSSAARNGLLTEHNIC 132 (166)
T ss_dssp EECCTT-------------------------CEEEEEECCTTSCCSEEEET----T-EEEEECTTSHHHHTTCCSSEEEE
T ss_pred EEcCCC-------------------------cEEEEEecCCCCcEeEEEeC----C-EEEEEccCCHHHHcCCCCCCEEE
Confidence 944323 13344544444578999872 4 89999999999999999999999
Q ss_pred EECCeeCCCcCHHHHHHHHcCCCCeEEEEEEe
Q psy3835 1286 EYNGTDLRAATAEEAAYELAKPADKVTVLAQY 1317 (1659)
Q Consensus 1286 ~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r 1317 (1659)
+|||.++.++....+...+.+.+..+.+.+.+
T Consensus 133 ~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 133 EINGQNVIGLKDSQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp EETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred EECCEECCCCChHHHHHHHhhCCCEEEEEEEE
Confidence 99999999999998888888888888888875
No 24
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.72 E-value=1.1e-16 Score=177.75 Aligned_cols=154 Identities=19% Similarity=0.314 Sum_probs=129.2
Q ss_pred cccceEEecCcCCCC-cCcccccC----C-CCCCCCCCEEEEECCEeCCCCChHHHHHHHHhcCCeEEEEEEeCCCCC--
Q psy3835 738 NGTGTILHPRRHKER-LPLSALLN----N-PPSYKVNDCIVRVNNLDCSNVSKRMVLETVRSSGTSALMVIRRRRVGA-- 809 (1659)
Q Consensus 738 ~glG~~i~gg~~~~~-~~V~~v~p----~-~g~l~~GD~Il~VNg~~~~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~-- 809 (1659)
.||||+|.++.+... ..|..|.| . .++|++||+|++|||+++.+++|.++..+++.++..+.|+|.|+.++.
T Consensus 19 ~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~ 98 (200)
T 2qt5_A 19 TTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYELPPVSI 98 (200)
T ss_dssp CCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEECCCCCC
T ss_pred CCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEeccCCCccc
Confidence 799999999876543 33777777 3 359999999999999999999999999999999999999999976431
Q ss_pred --cc--eEEEEEec-cCCCCcCeEec----------CceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHH
Q psy3835 810 --RS--LVTTQLQL-NNSYDHGLTLE----------SGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGM 874 (1659)
Q Consensus 810 --~~--~~~~~i~~-~~~~~lG~~~~----------~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~ 874 (1659)
.. ..++.+.+ +...+|||.+. .|++|..|.+||||+++|.|++||+|++|||.++.+ ++++++.
T Consensus 99 ~g~~~~~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~-~~~~~~~ 177 (200)
T 2qt5_A 99 QGSSVMFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLG-TTHAEAM 177 (200)
T ss_dssp CCSSEEEEEEEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT-CCHHHHH
T ss_pred CCCccceeEEEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC-CCHHHHH
Confidence 11 13445554 45577999863 368999999999999998899999999999999998 8899999
Q ss_pred HHHhcCCCeEEEEEEccC
Q psy3835 875 ALLSDSPDVLTITTLKPT 892 (1659)
Q Consensus 875 ~~l~~~~~~v~l~v~r~~ 892 (1659)
.+|+..+..+.|.|.|..
T Consensus 178 ~~l~~~~~~v~l~v~R~~ 195 (200)
T 2qt5_A 178 SILKQCGQEATLLIEYDV 195 (200)
T ss_dssp HHHHTTCSEEEEEEEEEE
T ss_pred HHHHcCCCeEEEEEEECC
Confidence 999997789999999874
No 25
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.67 E-value=1.5e-17 Score=202.29 Aligned_cols=162 Identities=19% Similarity=0.351 Sum_probs=73.9
Q ss_pred CCeEEEEEecC-CCCceEEEEecCC----CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC--
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCLDS----GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC-- 1198 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~~~----~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-- 1198 (1659)
...+.|.+.+. +++|||+|.+... .|++|..|.+||||+++| |++||+|++|||.++.++++.++..+++..
T Consensus 203 ~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~ 282 (388)
T 3suz_A 203 ENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKN 282 (388)
T ss_dssp SCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTT
T ss_pred ccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccC
Confidence 45678999997 6899999988632 369999999999999999 999999999999999999999999999875
Q ss_pred CCeEEEEEEecCCccccccCCCCCCCcccccCCCCCCCCeEEEE-ecCCcCccCeEEecCCCcceEEEEeCCCChhhhcC
Q psy3835 1199 GNSITMLVQYSPDKYHELEGSGSSSAENESVSGRGSGEPRFLMI-ETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG 1277 (1659)
Q Consensus 1199 ~~~v~l~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l-~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~g 1277 (1659)
+..++|+|.|.+.... +.+ .......|||++.++ +|..|.+||+|+++|
T Consensus 283 ~~~v~l~v~r~~~~~~-------------------------v~l~~~~~~~~lG~~i~~g-----~I~~V~~gs~A~~aG 332 (388)
T 3suz_A 283 QTQVKLNIVSCPPVTT-------------------------VLIKRPDLKYQLGFSVQNG-----IICSLMRGGIAERGG 332 (388)
T ss_dssp CSCEEEEEEECCSCC-----------------------------------------------------------------
T ss_pred CCccccccccccccce-------------------------eeEeecCCCCccceEEecC-----EEEEeecCCHHHHcC
Confidence 4569999998765211 111 112234689887653 899999999999999
Q ss_pred CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeC
Q psy3835 1278 LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYS 1318 (1659)
Q Consensus 1278 L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~ 1318 (1659)
|++||+|++|||+++.++++.+++..|...++.++|+|.+.
T Consensus 333 L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p~ 373 (388)
T 3suz_A 333 VRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPA 373 (388)
T ss_dssp -----------------------------------------
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEec
Confidence 99999999999999999999999999998999999999875
No 26
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.67 E-value=4.8e-16 Score=171.75 Aligned_cols=154 Identities=21% Similarity=0.341 Sum_probs=127.0
Q ss_pred cccceEEecCcCCCC---cC--cccccC----CCCC-CCCCCEEEEECCEeCCCCChHHHHHHHHhc--CCeEEEEEEeC
Q psy3835 738 NGTGTILHPRRHKER---LP--LSALLN----NPPS-YKVNDCIVRVNNLDCSNVSKRMVLETVRSS--GTSALMVIRRR 805 (1659)
Q Consensus 738 ~glG~~i~gg~~~~~---~~--V~~v~p----~~g~-l~~GD~Il~VNg~~~~~~~~~~~~~~l~~~--~~~v~l~v~R~ 805 (1659)
.||||++.++.+... .+ |..|.| ..++ |++||+|++|||.++.++++.++..+|+.. +..+.|+|.|.
T Consensus 18 ~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 97 (196)
T 1p1d_A 18 TGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFD 97 (196)
T ss_dssp TBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEEC
T ss_pred CccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEec
Confidence 699999999865432 22 777777 4445 999999999999999999999999999986 78999999998
Q ss_pred CCCCc----ceEEEEEeccCCCCcCeEe--------cCceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHH
Q psy3835 806 RVGAR----SLVTTQLQLNNSYDHGLTL--------ESGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREG 873 (1659)
Q Consensus 806 ~~~~~----~~~~~~i~~~~~~~lG~~~--------~~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea 873 (1659)
..... ....+.+.......|||++ ..|++|..|.+||||+++|+|++||+|++|||.++.+ ++++++
T Consensus 98 ~~~~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~-~~~~~~ 176 (196)
T 1p1d_A 98 VAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDS-CSMEDA 176 (196)
T ss_dssp SCSCCBCCSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGG-CCHHHH
T ss_pred CCCCCCCCCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCC-CCHHHH
Confidence 63221 1233344333456799988 3579999999999999998899999999999999999 999999
Q ss_pred HHHHhcCCCeEEEEEEccC
Q psy3835 874 MALLSDSPDVLTITTLKPT 892 (1659)
Q Consensus 874 ~~~l~~~~~~v~l~v~r~~ 892 (1659)
..+|+..+..+.|.|.|..
T Consensus 177 ~~~l~~~~~~v~l~v~R~~ 195 (196)
T 1p1d_A 177 VQILQQCEDLVKLKIRKDE 195 (196)
T ss_dssp HHHHHHCTTCEEEEEECCC
T ss_pred HHHHHhCCCEEEEEEEeCC
Confidence 9999988889999998863
No 27
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=99.62 E-value=8.2e-15 Score=163.05 Aligned_cols=167 Identities=9% Similarity=0.092 Sum_probs=145.0
Q ss_pred CCCcEEEECCCh---HHHHHHHhhhCCCcccccccceec--------------CChHHHHHhccCCceEEEEEeCCeeee
Q psy3835 1473 VLRPVILVGALS---DTVTDKLLQDFPDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYFEC 1535 (1659)
Q Consensus 1473 ~~RpvVl~Gp~g---~~l~~~Ll~~~p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~YG 1535 (1659)
.+..|+|+||+| +||++.|...+|. +.....++++ .+...|..++..+.|++|..+++++||
T Consensus 6 ~g~ii~l~Gp~GsGKSTl~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (205)
T 3tr0_A 6 KANLFIISAPSGAGKTSLVRALVKALAE-IKISISHTTRPKRPGDQEGVDYFFIDETRFQAMVKEGAFLEHATIYERHYG 84 (205)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHSSS-EEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETTEEEE
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhCCC-eEEeceeccCCCchhHhcCceEEeccHHHHHHHHhcCcEEeeeeeeccccc
Confidence 346789999998 9999999888874 6666777765 466789999999999999999999999
Q ss_pred ecHHHHHHHHHcCCCeEEEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHHH
Q psy3835 1536 TSVAAVKDACDKNNAHVILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGLK 1615 (1659)
Q Consensus 1536 ts~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~~ 1615 (1659)
++...|.++++. |++||+|++++++..++.....+++|||.||+.+.+.+|+. .|+..+++.+++++..+..
T Consensus 85 ~~~~~i~~~l~~-g~~vi~d~~~~~~~~~~~~~~~~~~v~~~~~~~e~l~~Rl~-------~R~~~~~~~i~~rl~~~~~ 156 (205)
T 3tr0_A 85 TEKDWVLRQLKA-GRDVLLEIDWQGARQIRELFPPALSIFILPPSIEALRERLI-------KRRQDDTAIIEQRLALARE 156 (205)
T ss_dssp EEHHHHHHHHHT-TCEEEEECCHHHHHHHHHHCTTCEEEEEECSCHHHHHHHHH-------TCTTSCSSTHHHHHHHHHH
T ss_pred chHHHHHHHHHc-CCeEEEEECHHHHHHHHHhCCCcEEEEEECcCHHHHHHHHH-------HhCCCCHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999988899999999999999999887 4455666778888887744
Q ss_pred HHHHcCCcceEEEeCCCCHHHHHHHHHHHHHhhcC
Q psy3835 1616 IECEHKHYISAVIPAGVNIAYMCTQIQTAVELEQS 1650 (1659)
Q Consensus 1616 ~e~~~~~~fd~vi~n~~~~~~~~~~l~~ii~~~~~ 1650 (1659)
+..+.+.||++|+|+ +++.++++|..+|..+..
T Consensus 157 -~~~~~~~~d~vi~n~-~~~~~~~~l~~~i~~~~~ 189 (205)
T 3tr0_A 157 -EMAHYKEFDYLVVND-NFDQAVQNLIHIISAERL 189 (205)
T ss_dssp -HHTTGGGCSEEEECS-SHHHHHHHHHHHHHHHTT
T ss_pred -HHhcccCCCEEEECC-CHHHHHHHHHHHHHHHHh
Confidence 556667899999999 999999999999986544
No 28
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=99.58 E-value=8.4e-15 Score=166.36 Aligned_cols=168 Identities=15% Similarity=0.134 Sum_probs=131.7
Q ss_pred CCCcEEEECCCh---HHHHHHHh-hhCCCcccccccceec--------------CChHHHHHhccCCceEEEEEeCCeee
Q psy3835 1473 VLRPVILVGALS---DTVTDKLL-QDFPDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYFE 1534 (1659)
Q Consensus 1473 ~~RpvVl~Gp~g---~~l~~~Ll-~~~p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~Y 1534 (1659)
....|+|+||+| +||++.|. ..+|. |..++++||| ++...|..++..+.|++|..+.+++|
T Consensus 26 ~G~ii~l~Gp~GsGKSTl~~~L~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (231)
T 3lnc_A 26 VGVILVLSSPSGCGKTTVANKLLEKQKNN-IVKSVSVTTRAARKGEKEGKDYYFVDREEFLRLCSNGEIIEHAEVFGNFY 104 (231)
T ss_dssp CCCEEEEECSCC----CHHHHHHC----C-EEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcCCCC-cccccccCCCCCCccccCCCeEEEecHHHhhhhhhcCceehhhhhccccC
Confidence 457899999998 99999999 87765 6778888886 57788999999999999999999999
Q ss_pred eecHHHHHHHHHcCCCeEEEEcChhHHHHHHhcC-CccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHH
Q psy3835 1535 CTSVAAVKDACDKNNAHVILDVSLAGVERLHRQH-VYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHG 1613 (1659)
Q Consensus 1535 Gts~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~-~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a 1613 (1659)
|++...|+++++. |+.||+|++++|...++... ..+++|||.||+.+.+.+|+. .|+..+++++++++..+
T Consensus 105 ~~~~~~i~~~~~~-~~~vild~~~~g~~~~~~~~~~~~~~v~v~~~~~~~l~~Rl~-------~R~~~~~~~i~~rl~~~ 176 (231)
T 3lnc_A 105 GVPRKNLEDNVDK-GVSTLLVIDWQGAFKFMEMMREHVVSIFIMPPSMEELRRRLC-------GRRADDSEVVEARLKGA 176 (231)
T ss_dssp EEECTTHHHHHHH-TCEEEEECCHHHHHHHHHHSGGGEEEEEEECSCHHHHHHC---------------------CHHHH
T ss_pred CCCHHHHHHHHHc-CCeEEEEcCHHHHHHHHHhcCCCeEEEEEECCcHHHHHHHHH-------HcCCCCHHHHHHHHHHH
Confidence 9999999999999 99999999999999998766 678999999999999988766 45667788888888776
Q ss_pred HHHHHHcCCcceEEEeCCCCHHHHHHHHHHHHHhhcCC
Q psy3835 1614 LKIECEHKHYISAVIPAGVNIAYMCTQIQTAVELEQSK 1651 (1659)
Q Consensus 1614 ~~~e~~~~~~fd~vi~n~~~~~~~~~~l~~ii~~~~~~ 1651 (1659)
.. +..+.+.||+||+|+ +++.++.+|..+|..+..+
T Consensus 177 ~~-~~~~~~~~d~vI~n~-~~e~~~~~l~~~i~~~~~~ 212 (231)
T 3lnc_A 177 AF-EISHCEAYDYVIVNE-DIEETADRISNILRAEQMK 212 (231)
T ss_dssp HH-HHTTGGGSSEEEECS-SHHHHHHHHHHHHHHHHTB
T ss_pred HH-HHhhhcCCeEEEECc-CHHHHHHHHHHHHHHHhhc
Confidence 54 455667899999999 9999999999999876544
No 29
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.57 E-value=2.8e-14 Score=158.81 Aligned_cols=146 Identities=21% Similarity=0.176 Sum_probs=111.9
Q ss_pred CCCcEEEEEeCCCChhhhcCCCCC-CEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEecCCccccccCCCCCCCccc
Q psy3835 1149 DSGGVFVSTVSEHSLASQVGLQVG-DQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQYSPDKYHELEGSGSSSAENE 1227 (1659)
Q Consensus 1149 ~~~gv~I~~V~~gs~A~~~GL~~G-D~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~~~~~~~~~~~~~~~~ 1227 (1659)
...|++|..|.++|||+++||++| |+|++|||.++.++++..........+..+.|.|.|......
T Consensus 14 ~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~------------- 80 (209)
T 3rle_A 14 GTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLEL------------- 80 (209)
T ss_dssp SSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCE-------------
T ss_pred CCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceE-------------
Confidence 456999999999999999999999 999999999999998776544445568899999998754211
Q ss_pred ccCCCCCCCCeEEEEec----CCcCccCeEEec-----CCCcceEEEEeCCCChhhhcCCCC-CCEEEEECCeeCCCcCH
Q psy3835 1228 SVSGRGSGEPRFLMIET----RKCSNLGISLVG-----GNAVGIYVHSVQSGSLGYSAGLRT-GDRILEYNGTDLRAATA 1297 (1659)
Q Consensus 1228 ~~~~~~~~~~~~v~l~k----~~~~~lGi~l~g-----g~~~gi~V~~V~~gs~A~~~gL~~-GD~Il~VNg~~v~~~t~ 1297 (1659)
..+.+.. .....||+++.. ....|++|..|.++|||+++||++ ||+|++|||. +.++..
T Consensus 81 ----------~~v~l~p~~~~~~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~ 149 (209)
T 3rle_A 81 ----------RETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESED 149 (209)
T ss_dssp ----------EEEEECCCSSSSSSSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSC
T ss_pred ----------EEEEEcccccccccCccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHH
Confidence 0111110 123368888763 122589999999999999999999 9999999998 887766
Q ss_pred HHHHHHHcCCCCeEEEEEEeCc
Q psy3835 1298 EEAAYELAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1298 ~~~~~~l~~~~~~v~L~v~r~~ 1319 (1659)
...+..- ..+..+.|.|.|+.
T Consensus 150 l~~~l~~-~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 150 LFSLIET-HEAKPLKLYVYNTD 170 (209)
T ss_dssp HHHHHHH-TTTSCEEEEEEETT
T ss_pred HHHHHHh-CCCCeEEEEEEECC
Confidence 6544332 36889999998863
No 30
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=99.52 E-value=3.9e-13 Score=150.94 Aligned_cols=170 Identities=16% Similarity=0.233 Sum_probs=144.1
Q ss_pred CCCCcEEEECCCh---HHHHHHHhhhCCCcccccccceec--------------CChHHHHHhccCCceEEEEEeCCeee
Q psy3835 1472 PVLRPVILVGALS---DTVTDKLLQDFPDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYFE 1534 (1659)
Q Consensus 1472 ~~~RpvVl~Gp~g---~~l~~~Ll~~~p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~Y 1534 (1659)
...++++|+||+| +||++.|...+|+.+...+++||+ .+...|..++..+.|++|+.|.+++|
T Consensus 21 ~~G~~~~lvGpsGsGKSTLl~~L~g~~pG~i~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 100 (218)
T 1z6g_A 21 NNIYPLVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDFLEYDNYANNFY 100 (218)
T ss_dssp -CCCCEEEECSTTSSHHHHHHHHHHHSTTTEEECCCEECSCCCSSCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhCCCcEEEeecccCCCCCcccccCCeEEECCHHHHHHhhhccchhhhhhcccccC
Confidence 3568899999998 999999988777445556777764 56778988888899999999999999
Q ss_pred eecHHHHHHHHHcCCCeEEEEcChhHHHHHHhcC--CccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHH
Q psy3835 1535 CTSVAAVKDACDKNNAHVILDVSLAGVERLHRQH--VYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEH 1612 (1659)
Q Consensus 1535 Gts~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~--~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 1612 (1659)
|++...++++++. ++.|+++++++|..+++... ..|..|||.+|++..|.++.. .++..+++.+.+++..
T Consensus 101 g~~~~~i~~~l~~-~~~~il~~~lsggq~qR~~i~~~~~~~~ll~~~~~~~Lde~~~-------~~d~~~~~~i~~~l~~ 172 (218)
T 1z6g_A 101 GTLKSEYDKAKEQ-NKICLFEMNINGVKQLKKSTHIKNALYIFIKPPSTDVLLSRLL-------TRNTENQEQIQKRMEQ 172 (218)
T ss_dssp EEEHHHHHHHHHT-TCEEEEEECHHHHHHHTTCSSCCSCEEEEEECSCHHHHHHHHH-------HTCCCCHHHHHHHHHH
T ss_pred CCcHHHHHHHHhC-CCcEEEEecHHHHHHHHHHhcCCCcEEEEEeCcCHHHHHHHHH-------hcCCCCHHHHHHHHHH
Confidence 9999999999999 99999999999999999776 678999999999999998876 4466788889888877
Q ss_pred HHHHHHHcC--CcceEEEeCCCCHHHHHHHHHHHHHhhcCC
Q psy3835 1613 GLKIECEHK--HYISAVIPAGVNIAYMCTQIQTAVELEQSK 1651 (1659)
Q Consensus 1613 a~~~e~~~~--~~fd~vi~n~~~~~~~~~~l~~ii~~~~~~ 1651 (1659)
+.+ +..+. ..||+||+|+ |+++|+..+..+|..+..+
T Consensus 173 ~~~-~~~~~h~~~~d~iiv~~-~~~ea~~~~~~ii~~~~~~ 211 (218)
T 1z6g_A 173 LNI-ELHEANLLNFNLSIIND-DLTLTYQQLKNYLLNSYIH 211 (218)
T ss_dssp HHH-HHHHHTTSCCSEEEECS-SHHHHHHHHHHHHHHHTTC
T ss_pred HHH-HHHhhcccCCCEEEECC-CHHHHHHHHHHHHHHHHHh
Confidence 644 33355 5799999999 9999999999999877554
No 31
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.51 E-value=5.8e-15 Score=179.52 Aligned_cols=147 Identities=18% Similarity=0.319 Sum_probs=56.0
Q ss_pred cccceEEecCcCC---CCcCcccccC-----CCCCCCCCCEEEEECCEeCCCCChHHHHHHHHhc--CCeEEEEEEeCCC
Q psy3835 738 NGTGTILHPRRHK---ERLPLSALLN-----NPPSYKVNDCIVRVNNLDCSNVSKRMVLETVRSS--GTSALMVIRRRRV 807 (1659)
Q Consensus 738 ~glG~~i~gg~~~---~~~~V~~v~p-----~~g~l~~GD~Il~VNg~~~~~~~~~~~~~~l~~~--~~~v~l~v~R~~~ 807 (1659)
.||||+|.++.+. +...|..|.| +.|+|++||+|++|||+++.+|+|.+++.+|+.. +..+.|+|.|...
T Consensus 216 e~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~ 295 (388)
T 3suz_A 216 EILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPP 295 (388)
T ss_dssp CCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCS
T ss_pred CceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccccc
Confidence 5899999885433 2223777777 4566999999999999999999999999999985 4569999999754
Q ss_pred CCcceEEEEEec-cCCCCcCeEecCceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcCCCeEEE
Q psy3835 808 GARSLVTTQLQL-NNSYDHGLTLESGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDSPDVLTI 886 (1659)
Q Consensus 808 ~~~~~~~~~i~~-~~~~~lG~~~~~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~~~~v~l 886 (1659)
.. .+.+.. ....+|||++.+| +|..|.|||||+++| |++||+|++|||.+|.+ .++++++.+|+..++.+.|
T Consensus 296 ~~----~v~l~~~~~~~~lG~~i~~g-~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~-~s~~~~~~~l~~~~~~v~L 368 (388)
T 3suz_A 296 VT----TVLIKRPDLKYQLGFSVQNG-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVA-TAHEKIVQALSNSVGEIHM 368 (388)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cc----eeeEeecCCCCccceEEecC-EEEEeecCCHHHHcC-CCCCCEEEEECCEECCC-CCHHHHHHHHHhCCCeEEE
Confidence 32 223322 3446799998766 799999999999988 99999999999999999 9999999999999899999
Q ss_pred EEEcc
Q psy3835 887 TTLKP 891 (1659)
Q Consensus 887 ~v~r~ 891 (1659)
.|.+.
T Consensus 369 ~V~p~ 373 (388)
T 3suz_A 369 KTMPA 373 (388)
T ss_dssp -----
T ss_pred EEEec
Confidence 88654
No 32
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.43 E-value=8.7e-13 Score=163.17 Aligned_cols=153 Identities=18% Similarity=0.193 Sum_probs=110.1
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEecCCccccccCCCCCCCccccc
Q psy3835 1150 SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQYSPDKYHELEGSGSSSAENESV 1229 (1659)
Q Consensus 1150 ~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~~~~~~~~~~~~~~~~~~ 1229 (1659)
..|++|..|.++|||+++||++||+|++|||.++.++.+.........++..++|+|.|++.... +.......+..
T Consensus 262 ~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~-~~v~l~~~~~~--- 337 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLE-VEVTLDTSTSS--- 337 (436)
T ss_pred CcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEE-EEEEECCCCcc---
Confidence 46899999999999999999999999999999999887766555544568999999999876432 11100000000
Q ss_pred CCCCCCCCeEEEEecCCcCccCeEEec-------CCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHH
Q psy3835 1230 SGRGSGEPRFLMIETRKCSNLGISLVG-------GNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAY 1302 (1659)
Q Consensus 1230 ~~~~~~~~~~v~l~k~~~~~lGi~l~g-------g~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~ 1302 (1659)
.... ....+|+.... ....|++|..|.+||||+++||++||+|++|||+++.++.. ...
T Consensus 338 ------~~~~------~~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~--~~~ 403 (436)
T 4a8c_A 338 ------SASA------EMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAE--MRK 403 (436)
T ss_pred ------cccc------cccccCceeeecccccccCCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHH--HHH
Confidence 0000 00012332221 12258999999999999999999999999999999987644 445
Q ss_pred HHcCCCCeEEEEEEeCcc
Q psy3835 1303 ELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1303 ~l~~~~~~v~L~v~r~~~ 1320 (1659)
.+...++.+.|+|.|+..
T Consensus 404 ~l~~~~~~v~l~v~R~g~ 421 (436)
T 4a8c_A 404 VLAAKPAIIALQIVRGNE 421 (436)
T ss_pred HHHhCCCeEEEEEEECCE
Confidence 566667799999999753
No 33
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.43 E-value=1.1e-12 Score=140.65 Aligned_cols=143 Identities=22% Similarity=0.297 Sum_probs=113.9
Q ss_pred cccceEEecCcCCCCcCcccccC----CCCCCCCCCEEEEECCEeCCCCChHHHHHHHHhc-CCeEEEEEEeCCCCCcce
Q psy3835 738 NGTGTILHPRRHKERLPLSALLN----NPPSYKVNDCIVRVNNLDCSNVSKRMVLETVRSS-GTSALMVIRRRRVGARSL 812 (1659)
Q Consensus 738 ~glG~~i~gg~~~~~~~V~~v~p----~~g~l~~GD~Il~VNg~~~~~~~~~~~~~~l~~~-~~~v~l~v~R~~~~~~~~ 812 (1659)
.+|||++.+.. ..+.|..|.| ..++|++||+|++|||.++.++++..+..+++.. +..+.|+| |+... .
T Consensus 16 ~~lG~~~~~~~--~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~v-r~~~~---~ 89 (166)
T 1w9e_A 16 GKIGLRLKSID--NGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTI-RDRPF---E 89 (166)
T ss_dssp SCCSEEEEEET--TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEE-ECCTT---C
T ss_pred CcEeEEEEeCC--CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEE-EcCCC---c
Confidence 68999998642 2233667766 5568999999999999999999997788888764 56899999 44321 1
Q ss_pred EEEEEeccCCCCcCeEecCceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcCCCeEEEEEE
Q psy3835 813 VTTQLQLNNSYDHGLTLESGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDSPDVLTITTL 889 (1659)
Q Consensus 813 ~~~~i~~~~~~~lG~~~~~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~~~~v~l~v~ 889 (1659)
..+++.......|||.+..| +|..|.++|||++.| |++||+|++|||.++.+ .++..+.-.+.+.+..+.+.+.
T Consensus 90 ~~v~l~~~~~~~lG~~~~~g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~-~~~~~v~~~v~r~g~~~~l~v~ 163 (166)
T 1w9e_A 90 RTITMHKDSTGHVGFIFKNG-KITSIVKDSSAARNG-LLTEHNICEINGQNVIG-LKDSQIADILSTSGTVVTITIM 163 (166)
T ss_dssp EEEEEECCTTSCCSEEEETT-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTT-CCHHHHHHHHHHSCSEEEEEEE
T ss_pred EEEEEecCCCCcEeEEEeCC-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCC-CChHHHHHHHhhCCCEEEEEEE
Confidence 23444433446799999877 899999999999887 99999999999999999 8899988888888887777664
No 34
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.41 E-value=1.6e-12 Score=161.02 Aligned_cols=154 Identities=21% Similarity=0.304 Sum_probs=109.1
Q ss_pred CcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEecCCccccccCCCCCCCcccccC
Q psy3835 1151 GGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQYSPDKYHELEGSGSSSAENESVS 1230 (1659)
Q Consensus 1151 ~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~~~~~~~~~~~~~~~~~~~ 1230 (1659)
.|++|..|.++|||+++||++||+|++|||.++.++.+.........+|..+.|+|.|++.... +.......+......
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~-~~v~l~~~~~~~~~~ 360 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLT-LSAVVTDIKSHEQKL 360 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETTEEEE-EEEECBCHHHHHHHH
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEE-EEEEEccCCcccccc
Confidence 7999999999999999999999999999999999886665544444578999999999876432 111000000000000
Q ss_pred CCCCCCCeEEEEecCCcCccCeEEec--------CCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHH
Q psy3835 1231 GRGSGEPRFLMIETRKCSNLGISLVG--------GNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAY 1302 (1659)
Q Consensus 1231 ~~~~~~~~~v~l~k~~~~~lGi~l~g--------g~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~ 1302 (1659)
. ......+|+.+.. +...|++|..|.+||||+++||++||+|++|||+++.++.. ...
T Consensus 361 ~------------~~~~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~--~~~ 426 (451)
T 3pv2_A 361 Q------------SNNPFLYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKS--LQT 426 (451)
T ss_dssp H------------HHSTTTTTEEEEEEEEECTTSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH--HHH
T ss_pred c------------cccccccccccccCChhHhcccCCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHH--HHH
Confidence 0 0000122333321 01248999999999999999999999999999999987744 445
Q ss_pred HHcCCCCeEEEEEEeCc
Q psy3835 1303 ELAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1303 ~l~~~~~~v~L~v~r~~ 1319 (1659)
.+...++.+.|.|.|+.
T Consensus 427 ~l~~~~~~v~l~v~R~g 443 (451)
T 3pv2_A 427 IAQEKKKELLVQVLRGP 443 (451)
T ss_dssp HTTSSCSCEEEEEEETT
T ss_pred HHhcCCCeEEEEEEECC
Confidence 56667889999999874
No 35
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.38 E-value=5.8e-13 Score=183.90 Aligned_cols=53 Identities=11% Similarity=0.068 Sum_probs=28.5
Q ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3835 285 STQTMPLYVRQHNETVRRGDHTLKELEYYRGQHQAAMAQLEAAAQESSSLRSK 337 (1659)
Q Consensus 285 ~~~Ele~L~~q~~E~~~rl~~le~El~~l~~~l~el~~~l~~lk~e~~~l~~e 337 (1659)
..++++++++++.++..++..+++.+..++..+..+..++..++.++......
T Consensus 855 ~~~El~~L~~eL~el~~~L~~le~~l~ele~~l~~Le~e~~~l~~~L~~e~~~ 907 (1184)
T 1i84_S 855 QEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETEL 907 (1184)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666666666666666666555555555544444444444444333333
No 36
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=99.36 E-value=7.2e-12 Score=139.31 Aligned_cols=167 Identities=18% Similarity=0.257 Sum_probs=118.3
Q ss_pred CCCcEEEECCCh---HHHHHHHhhhC-CCcccccccceec--------------CChHHHHHhccCCceEEEEEeCCeee
Q psy3835 1473 VLRPVILVGALS---DTVTDKLLQDF-PDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGAYFE 1534 (1659)
Q Consensus 1473 ~~RpvVl~Gp~g---~~l~~~Ll~~~-p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g~~Y 1534 (1659)
.+..|+|+||+| +|+.+.|...+ |+ +...+.++++ .+.+.|..++..+.|++|..+.+++|
T Consensus 5 ~g~~i~l~G~~GsGKSTl~~~L~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (207)
T 2j41_A 5 KGLLIVLSGPSGVGKGTVRKRIFEDPSTS-YKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYY 83 (207)
T ss_dssp CCCEEEEECSTTSCHHHHHHHHHHCTTCC-EECCCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhhCCC-eEEecccccCCCCCCccCCCceEEcCHHHHHHHHHcCCeEEEEeECCeec
Confidence 356789999998 99999998876 53 5556666665 35678889999999999999999999
Q ss_pred eecHHHHHHHHHcCCCeEEEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHHHH
Q psy3835 1535 CTSVAAVKDACDKNNAHVILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEHGL 1614 (1659)
Q Consensus 1535 Gts~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~a~ 1614 (1659)
|++...++.+++. |+.||+|+.+.+...++...+.+++||+.||+.+.+.+|+. .|+..+.+++.+++....
T Consensus 84 g~~~~~i~~~l~~-g~~vv~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~Rl~-------~R~~~~~~~~~~rl~~~~ 155 (207)
T 2j41_A 84 GTPVQYVKDTMDE-GHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLV-------GRGTESDEKIQSRINEAR 155 (207)
T ss_dssp EEEHHHHHHHHHT-TCEEEEECCGGGHHHHHHHCTTSEEEEEECCC----------------------------------
T ss_pred CCCHHHHHHHHHc-CCeEEEEECHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHH-------hcCCCCHHHHHHHHHHHH
Confidence 9999999999999 99999999999998888766678999999999888887766 344455566777776543
Q ss_pred HHHHHcCCcceEEEeCCCCHHHHHHHHHHHHHhhcC
Q psy3835 1615 KIECEHKHYISAVIPAGVNIAYMCTQIQTAVELEQS 1650 (1659)
Q Consensus 1615 ~~e~~~~~~fd~vi~n~~~~~~~~~~l~~ii~~~~~ 1650 (1659)
. +..+...+|++|+|+ +++.++.+|..+|..+..
T Consensus 156 ~-~~~~~~~~d~vI~n~-~~e~~~~~i~~~l~~~~~ 189 (207)
T 2j41_A 156 K-EVEMMNLYDYVVVND-EVELAKNRIQCIVEAEHL 189 (207)
T ss_dssp C-GGGGGGGCSEEEECS-SHHHHHHHHHHHHHHHHT
T ss_pred H-HHhccccCCEEEECC-CHHHHHHHHHHHHHHhhc
Confidence 2 233445789999999 999999999999987644
No 37
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.33 E-value=7.8e-13 Score=182.62 Aligned_cols=42 Identities=10% Similarity=0.035 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3835 297 NETVRRGDHTLKELEYYRGQHQAAMAQLEAAAQESSSLRSKY 338 (1659)
Q Consensus 297 ~E~~~rl~~le~El~~l~~~l~el~~~l~~lk~e~~~l~~e~ 338 (1659)
.++..++..++.++..++..+.++..++..++.+...++.++
T Consensus 860 ~~L~~eL~el~~~L~~le~~l~ele~~l~~Le~e~~~l~~~L 901 (1184)
T 1i84_S 860 QAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKL 901 (1184)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444444444444444444444444433333
No 38
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.32 E-value=8e-12 Score=117.73 Aligned_cols=86 Identities=22% Similarity=0.276 Sum_probs=77.7
Q ss_pred CCCeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC--CCeE
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC--GNSI 1202 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~~~v 1202 (1659)
.+.++.|.|.|...+|||+|.+++.+.+||++|.+||+|++.| |++||.|++|||+++.+++|.+++.+|+.. +..+
T Consensus 3 ~g~~k~V~l~K~~~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~ 82 (95)
T 3gge_A 3 KGIEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELF 82 (95)
T ss_dssp CEEEEEEEEECCSSCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEE
T ss_pred CCeEEEEEEEECCCCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEE
Confidence 4678999999999999999997767789999999999999999 999999999999999999999999999985 5688
Q ss_pred EEEEEecCC
Q psy3835 1203 TMLVQYSPD 1211 (1659)
Q Consensus 1203 ~l~v~r~~~ 1211 (1659)
+|.+.+.-.
T Consensus 83 ~L~lv~p~~ 91 (95)
T 3gge_A 83 TMKLIEPKK 91 (95)
T ss_dssp EEEEEEECS
T ss_pred EEEEECccc
Confidence 888876543
No 39
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.31 E-value=6.5e-12 Score=116.29 Aligned_cols=80 Identities=21% Similarity=0.283 Sum_probs=73.7
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
+..+|.++|.|....+|||++.++ +|.+|.+||||+++||++||+|++|||+++.++++.+++.+|+.++..|+|
T Consensus 2 ~~~~r~v~l~k~~~g~~Gf~i~~g-----~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L 76 (82)
T 1r6j_A 2 AMDPRTITMHKDSTGHVGFIFKNG-----KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI 76 (82)
T ss_dssp TTCCEEEEEECCTTSCCCEEEETT-----EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEE
T ss_pred CCceEEEEEEECCCCCeEEEEECC-----EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEE
Confidence 356899999999888899999865 489999999999999999999999999999999999999999988999999
Q ss_pred EEEeC
Q psy3835 1314 LAQYS 1318 (1659)
Q Consensus 1314 ~v~r~ 1318 (1659)
+|.+.
T Consensus 77 ~v~p~ 81 (82)
T 1r6j_A 77 TIMPA 81 (82)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99874
No 40
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.30 E-value=1e-11 Score=114.96 Aligned_cols=76 Identities=18% Similarity=0.282 Sum_probs=70.3
Q ss_pred CeEEEEEecCC-CCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEE
Q psy3835 1128 ELRRVHIDKSV-EPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLV 1206 (1659)
Q Consensus 1128 ~~~~v~l~k~~-~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 1206 (1659)
.+|.|.|.|.. ++|||++.++ +|..|.++|||+++||++||+|++|||.++.+++|.+++.+|+.++..|+|+|
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g-----~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~v 78 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG-----KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITI 78 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT-----EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEE
T ss_pred ceEEEEEEECCCCCeEEEEECC-----EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEE
Confidence 57999999996 5799999864 48999999999999999999999999999999999999999999999999998
Q ss_pred Ee
Q psy3835 1207 QY 1208 (1659)
Q Consensus 1207 ~r 1208 (1659)
..
T Consensus 79 ~p 80 (82)
T 1r6j_A 79 MP 80 (82)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 41
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.25 E-value=2.4e-11 Score=135.19 Aligned_cols=147 Identities=12% Similarity=0.114 Sum_probs=103.8
Q ss_pred ccceEEecCcCCCC-cCcccccC----CCCCCCCC-CEEEEECCEeCCCCChHHHHHHHHhcCCeEEEEEEeCCCCCcce
Q psy3835 739 GTGTILHPRRHKER-LPLSALLN----NPPSYKVN-DCIVRVNNLDCSNVSKRMVLETVRSSGTSALMVIRRRRVGARSL 812 (1659)
Q Consensus 739 glG~~i~gg~~~~~-~~V~~v~p----~~g~l~~G-D~Il~VNg~~~~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~~~~ 812 (1659)
|+|++...+...+. .-|..|.| +.++|++| |+|++|||+++.++++....-+....+..+.|+|.|......
T Consensus 3 g~~~~~~~~~~~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~-- 80 (209)
T 3rle_A 3 GSSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLEL-- 80 (209)
T ss_dssp -----CCCTTSSSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCE--
T ss_pred chhhhhhccCCCCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceE--
Confidence 55566654433322 22777777 67999999 999999999999998765433334468899999999753322
Q ss_pred EEEEEecc----CCCCcCeEec---------CceEEEEeCCCChhhhcCCCCC-CCEEEEeCCcccCCcccHHHHHHHHh
Q psy3835 813 VTTQLQLN----NSYDHGLTLE---------SGLYICKISPGSLAAKEGSLAV-GDRVLSINNRTVDGLSSAREGMALLS 878 (1659)
Q Consensus 813 ~~~~i~~~----~~~~lG~~~~---------~gi~I~~v~~gs~A~~~g~L~~-GD~Il~ing~~v~~~~~~~ea~~~l~ 878 (1659)
..+++... ....||+++. .|++|..|.++|||+++| |++ ||.|++|||. +.+ +++...+|+
T Consensus 81 ~~v~l~p~~~~~~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~---~~~l~~~l~ 155 (209)
T 3rle_A 81 RETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNE---SEDLFSLIE 155 (209)
T ss_dssp EEEEECCCSSSSSSSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCS---SSCHHHHHH
T ss_pred EEEEEcccccccccCccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCC---HHHHHHHHH
Confidence 23333211 3346888773 689999999999999987 999 9999999998 766 455566666
Q ss_pred cC-CCeEEEEEEccC
Q psy3835 879 DS-PDVLTITTLKPT 892 (1659)
Q Consensus 879 ~~-~~~v~l~v~r~~ 892 (1659)
.. +..+.|.|.|..
T Consensus 156 ~~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 156 THEAKPLKLYVYNTD 170 (209)
T ss_dssp HTTTSCEEEEEEETT
T ss_pred hCCCCeEEEEEEECC
Confidence 65 478999998864
No 42
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.24 E-value=4.9e-11 Score=113.80 Aligned_cols=84 Identities=21% Similarity=0.326 Sum_probs=77.7
Q ss_pred CeEEEEEecCCCCceEEEEecC-CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD-SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLV 1206 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 1206 (1659)
.++.|.|.+...+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++..+++..+..+.|.|
T Consensus 4 ~~r~v~l~k~~~g~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 83 (90)
T 2he4_A 4 RPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLV 83 (90)
T ss_dssp CCEEEEEECBTTBCCEEEEECSSSSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEEEE
T ss_pred CcEEEEEEECCCCccEEEEccCCCCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEE
Confidence 5789999999999999999874 468999999999999999999999999999999999999999999998889999999
Q ss_pred EecCC
Q psy3835 1207 QYSPD 1211 (1659)
Q Consensus 1207 ~r~~~ 1211 (1659)
.|...
T Consensus 84 ~r~~~ 88 (90)
T 2he4_A 84 VGPST 88 (90)
T ss_dssp ECCCC
T ss_pred EccCC
Confidence 98654
No 43
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.23 E-value=5.2e-11 Score=115.09 Aligned_cols=86 Identities=29% Similarity=0.530 Sum_probs=79.2
Q ss_pred CCCeEEEEEecCCCCceEEEEecC-----CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCC
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLD-----SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCG 1199 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~-----~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 1199 (1659)
+++++.|.|.+.+.+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.++
T Consensus 3 ~g~~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 3 PGDIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp TTCEEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CCCEEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 567899999999999999999873 3599999999999999999 9999999999999999999999999999888
Q ss_pred CeEEEEEEecCC
Q psy3835 1200 NSITMLVQYSPD 1211 (1659)
Q Consensus 1200 ~~v~l~v~r~~~ 1211 (1659)
..+.|.|.|++.
T Consensus 83 ~~v~l~v~R~~~ 94 (96)
T 1d5g_A 83 QVVHLLLEKGQS 94 (96)
T ss_dssp SEEEEEEECCSC
T ss_pred CeEEEEEEcCCC
Confidence 999999988764
No 44
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.23 E-value=6.5e-11 Score=113.15 Aligned_cols=86 Identities=24% Similarity=0.397 Sum_probs=77.3
Q ss_pred CCCCeEEEEEecCC--CCceEEEEecC-CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe
Q psy3835 1125 HPGELRRVHIDKSV--EPLGIQIQCLD-SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNS 1201 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~--~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 1201 (1659)
.+.+.+.|.+.+.. .+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..
T Consensus 3 ~~~~~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 82 (91)
T 1m5z_A 3 TPVELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNK 82 (91)
T ss_dssp SCCEEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTE
T ss_pred CCcceEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 45678899999974 58999999874 5799999999999999999999999999999999999999999988888899
Q ss_pred EEEEEEecC
Q psy3835 1202 ITMLVQYSP 1210 (1659)
Q Consensus 1202 v~l~v~r~~ 1210 (1659)
+.|.|.|++
T Consensus 83 v~l~v~R~p 91 (91)
T 1m5z_A 83 LDLVISRNP 91 (91)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEeCc
Confidence 999998864
No 45
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.22 E-value=4.9e-11 Score=117.13 Aligned_cols=90 Identities=34% Similarity=0.611 Sum_probs=81.3
Q ss_pred CCCCCeEEEEEecCCCCceEEEEecCC-CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe
Q psy3835 1124 PHPGELRRVHIDKSVEPLGIQIQCLDS-GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNS 1201 (1659)
Q Consensus 1124 ~~~~~~~~v~l~k~~~~lG~sl~~~~~-~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 1201 (1659)
+.+..++.|.|.+.+.+|||++.++.. .|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.++..
T Consensus 7 ~~~~~~~~v~l~k~~~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 86 (104)
T 3i4w_A 7 DIPREPRRIVIHRGSTGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 86 (104)
T ss_dssp CCCSSCEEEEEECBTTBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCCCccEEEEEEeCCCccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 345678999999999999999998754 499999999999999999 999999999999999999999999999999999
Q ss_pred EEEEEEecCCcc
Q psy3835 1202 ITMLVQYSPDKY 1213 (1659)
Q Consensus 1202 v~l~v~r~~~~~ 1213 (1659)
++|+|.|++..+
T Consensus 87 v~l~v~r~~~~~ 98 (104)
T 3i4w_A 87 VTIIAQYKPEEY 98 (104)
T ss_dssp EEEEEEECHHHH
T ss_pred EEEEEEECcchh
Confidence 999999987544
No 46
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.22 E-value=7.7e-11 Score=114.36 Aligned_cols=86 Identities=33% Similarity=0.433 Sum_probs=79.2
Q ss_pred CCeEEEEEecCCCCceEEEEecCC---CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeE
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLDS---GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSI 1202 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~~---~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 1202 (1659)
++++.|.+.+...+|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.++..+
T Consensus 3 g~~~~v~l~~~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (98)
T 2opg_A 3 GCETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRV 82 (98)
T ss_dssp CEEEEEEEECBTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CCEEEEEEEECCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 567899999999999999998743 699999999999999999 9999999999999999999999999999888999
Q ss_pred EEEEEecCCc
Q psy3835 1203 TMLVQYSPDK 1212 (1659)
Q Consensus 1203 ~l~v~r~~~~ 1212 (1659)
.|.|.|++..
T Consensus 83 ~l~v~R~~~~ 92 (98)
T 2opg_A 83 RLTLYRDEAP 92 (98)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEcCCCC
Confidence 9999997763
No 47
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.22 E-value=3.5e-11 Score=121.21 Aligned_cols=88 Identities=28% Similarity=0.425 Sum_probs=74.9
Q ss_pred CCCCCeEEEEEecCC-CCceEEEEecC-----CCcEEEEEeCCCChhhhc-CCCCCCEEEeeCCeecCCCCHHHHHHHHH
Q psy3835 1124 PHPGELRRVHIDKSV-EPLGIQIQCLD-----SGGVFVSTVSEHSLASQV-GLQVGDQLLEVCGINMRSATYQLAASVLR 1196 (1659)
Q Consensus 1124 ~~~~~~~~v~l~k~~-~~lG~sl~~~~-----~~gv~I~~V~~gs~A~~~-GL~~GD~Il~VNg~~v~~~~~~~~~~~l~ 1196 (1659)
+.+..++.|.|.|.. .+|||+|.++. ..|++|..|.++|||+++ ||++||+|++|||.++.++++.+++.+++
T Consensus 20 s~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~ 99 (120)
T 2iwo_A 20 FQSMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLK 99 (120)
T ss_dssp -----CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred CCCCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 345678999999986 59999999873 358999999999999999 79999999999999999999999999999
Q ss_pred hCCCeEEEEEEecCC
Q psy3835 1197 QCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1197 ~~~~~v~l~v~r~~~ 1211 (1659)
.++..|+|+|.|++.
T Consensus 100 ~~~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 100 NASGSIEMQVVAGGD 114 (120)
T ss_dssp HCCSEEEEEEECCTT
T ss_pred cCCCeEEEEEEECCc
Confidence 999999999998775
No 48
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.21 E-value=6.5e-11 Score=116.43 Aligned_cols=85 Identities=22% Similarity=0.358 Sum_probs=77.9
Q ss_pred CCeEEEEEecCCCCceEEEEecC-------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLD-------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC 1198 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~-------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 1198 (1659)
...+.|.|.+.+.+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.+
T Consensus 2 e~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (105)
T 2awx_A 2 EKIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT 81 (105)
T ss_dssp -CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC
T ss_pred CeEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 46789999999999999999873 2599999999999999999 999999999999999999999999999988
Q ss_pred CCeEEEEEEecCC
Q psy3835 1199 GNSITMLVQYSPD 1211 (1659)
Q Consensus 1199 ~~~v~l~v~r~~~ 1211 (1659)
+..|.|.|.|.+.
T Consensus 82 ~~~v~l~v~R~~~ 94 (105)
T 2awx_A 82 SDFVYLKVAKPTS 94 (105)
T ss_dssp CSEEEEEEECCCC
T ss_pred CCeEEEEEEcCCC
Confidence 8999999998775
No 49
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=7.3e-11 Score=116.52 Aligned_cols=86 Identities=26% Similarity=0.393 Sum_probs=78.9
Q ss_pred CCCeEEEEEecCCCCceEEEEecC----------CCcEEEEEeCCCChhhhc-CCCCCCEEEeeCCeecCCCCHHHHHHH
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLD----------SGGVFVSTVSEHSLASQV-GLQVGDQLLEVCGINMRSATYQLAASV 1194 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~----------~~gv~I~~V~~gs~A~~~-GL~~GD~Il~VNg~~v~~~~~~~~~~~ 1194 (1659)
..+++.|.|.+...+|||+|.++. ..|++|..|.++|||+++ ||++||+|++|||.++.++++.+++.+
T Consensus 6 ~~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~ 85 (107)
T 1uhp_A 6 SGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEA 85 (107)
T ss_dssp SSEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHH
T ss_pred CcEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 457899999999999999999863 469999999999999999 799999999999999999999999999
Q ss_pred HHhCCCeEEEEEEecCC
Q psy3835 1195 LRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1195 l~~~~~~v~l~v~r~~~ 1211 (1659)
++.++..+.|+|.|...
T Consensus 86 ~~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 86 FKTAKEPIVVQVLRRTS 102 (107)
T ss_dssp HHHCCSSEEEEEEECCS
T ss_pred HHcCCCcEEEEEEeCCC
Confidence 99989999999998754
No 50
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.20 E-value=1.2e-10 Score=115.81 Aligned_cols=87 Identities=37% Similarity=0.545 Sum_probs=80.3
Q ss_pred CCCeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEE
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITM 1204 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 1204 (1659)
...++.|.+.+...+|||+|.++.+.|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.++..|.|
T Consensus 13 ~~~~~~v~l~~~~~~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l 92 (111)
T 2dlu_A 13 WGHVEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRM 92 (111)
T ss_dssp CSEEEEEEEECCSSCCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEEE
T ss_pred cCceEEEEEEeCCCccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 4567899999999999999998877899999999999999999 999999999999999999999999999988899999
Q ss_pred EEEecCCc
Q psy3835 1205 LVQYSPDK 1212 (1659)
Q Consensus 1205 ~v~r~~~~ 1212 (1659)
+|.|++..
T Consensus 93 ~v~R~~~~ 100 (111)
T 2dlu_A 93 LVARDPAG 100 (111)
T ss_dssp EEEESCTT
T ss_pred EEEeCCCC
Confidence 99997763
No 51
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.20 E-value=8.9e-11 Score=116.05 Aligned_cols=86 Identities=19% Similarity=0.303 Sum_probs=77.6
Q ss_pred CCCeEEEEEecCCCCceEEEEec------CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCL------DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC 1198 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~------~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 1198 (1659)
...++.|.|.|.+.+|||+|.++ ...|++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..
T Consensus 13 ~~~~~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 13 SPEVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp CSSCEEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred CCceEEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45679999999999999999986 24689999999999999999 999999999999999999999999999985
Q ss_pred -CCeEEEEEEecCC
Q psy3835 1199 -GNSITMLVQYSPD 1211 (1659)
Q Consensus 1199 -~~~v~l~v~r~~~ 1211 (1659)
+..|+|+|.|.+.
T Consensus 93 ~~~~v~l~v~R~~~ 106 (108)
T 2d92_A 93 PPGLVHLGICSGPS 106 (108)
T ss_dssp CSEEEEEEEECCCC
T ss_pred CCCeEEEEEEcCCC
Confidence 5789999988654
No 52
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=5.3e-11 Score=112.91 Aligned_cols=83 Identities=22% Similarity=0.233 Sum_probs=75.0
Q ss_pred CeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhh-cCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEE
Q psy3835 1237 PRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 1315 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~-~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v 1315 (1659)
.|+|.|.|.++.+|||++.++...+++|..|.+||||++ +||++||+|++|||+++.++++.++...|+...+.++|+|
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v 81 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKI 81 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEE
T ss_pred eEEEEEEeCCCCceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 478999999878999999985556899999999999999 8999999999999999999999999999987766999999
Q ss_pred EeCc
Q psy3835 1316 QYSV 1319 (1659)
Q Consensus 1316 ~r~~ 1319 (1659)
.|..
T Consensus 82 ~r~~ 85 (88)
T 1kwa_A 82 VPSY 85 (88)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 8864
No 53
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.19 E-value=6.4e-11 Score=121.14 Aligned_cols=87 Identities=16% Similarity=0.250 Sum_probs=77.8
Q ss_pred CCCCeEEEEEecCCCCceEEEEecC-----CCcEEEEEeCCCChhhhc-CCCCCCEEEeeCCeecCCCCHHHHHHHHHhC
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLD-----SGGVFVSTVSEHSLASQV-GLQVGDQLLEVCGINMRSATYQLAASVLRQC 1198 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~-----~~gv~I~~V~~gs~A~~~-GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 1198 (1659)
.....+.|.|.+...+|||+|.++. ..+++|..|.+||||+++ ||++||+|++|||.++.+++|.+++.+++.+
T Consensus 26 ~~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 105 (130)
T 1i16_A 26 AEATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL 105 (130)
T ss_dssp SSEEEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS
T ss_pred CCCcEEEEEEEcCCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4457889999999999999999874 358999999999999999 7999999999999999999999999999987
Q ss_pred C-CeEEEEEEecCC
Q psy3835 1199 G-NSITMLVQYSPD 1211 (1659)
Q Consensus 1199 ~-~~v~l~v~r~~~ 1211 (1659)
+ ..|.|+|.|...
T Consensus 106 ~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 106 PDGPVTIVIRRKSL 119 (130)
T ss_dssp CSSEEEEEEEEESS
T ss_pred CCceEEEEEEeCCC
Confidence 5 469999988754
No 54
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.19 E-value=1e-10 Score=112.49 Aligned_cols=83 Identities=23% Similarity=0.347 Sum_probs=75.9
Q ss_pred CeEEEEEecCCCCceEEEEecC-------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCC
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD-------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCG 1199 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~-------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 1199 (1659)
+.+.|.|.+.+.+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.++
T Consensus 3 ~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (94)
T 2fe5_A 3 TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS 82 (94)
T ss_dssp CEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC
T ss_pred EEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 5788999999999999999862 3489999999999999999 9999999999999999999999999999888
Q ss_pred CeEEEEEEecC
Q psy3835 1200 NSITMLVQYSP 1210 (1659)
Q Consensus 1200 ~~v~l~v~r~~ 1210 (1659)
..+.|.|.|++
T Consensus 83 ~~v~l~v~R~g 93 (94)
T 2fe5_A 83 DMVYLKVAKPG 93 (94)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEcCC
Confidence 89999998764
No 55
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.19 E-value=2.3e-11 Score=122.20 Aligned_cols=93 Identities=20% Similarity=0.437 Sum_probs=75.0
Q ss_pred CCCcceeEEEEEeccCCCCCCccCeeecCCCCCCCC-CCCccEEEEeeccCCccCCcccccceeeeeccc-cchhhhh-H
Q psy3835 55 DLQEWDTEVLDMNLTNLSPNEALGLELVGGRDDPFY-PNDSSIYVSNIVKGSVTDGKLKKKEEVARIKKQ-CEDMNQE-K 131 (1659)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~p~~-~~d~~i~v~~v~~g~~a~g~l~~~d~i~~vn~~-~~~~~~~-~ 131 (1659)
+-.+|+...|.+.. . .+.||||.|+||+++|++ +++.|+||+.|.+||+|+++|++||+|+.||++ |.+++|. +
T Consensus 9 ~~~~~~~~~v~l~k--~-~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~~gL~~GD~I~~Vng~~v~~~~~~~~ 85 (117)
T 2csj_A 9 EEVIWEQYTVTLQK--D-SKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHSFA 85 (117)
T ss_dssp SCEEEEEEEEEEEC--C-SSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHHHHBCTTCEEEEESSCBCBTCCHHHH
T ss_pred ccccceEEEEEEEE--C-CCCccCEEEeCCcCCccccCCCCCEEEEEECCCCcccccCCCCCEEEEECCEECCCcCHHHH
Confidence 34677777776664 2 236999999999999999 478999999999999999999999999999999 9888877 5
Q ss_pred HHHHHhhcchhHHHHhhcccceeeeehhh
Q psy3835 132 NTALRERNGLKQQCTAAIRQWDIALRERN 160 (1659)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~ 160 (1659)
+.++ ..+...+.|+|.|+.
T Consensus 86 ~~~l----------~~~~~~v~l~v~R~~ 104 (117)
T 2csj_A 86 VQQL----------RKSGKIAAIVVKRPR 104 (117)
T ss_dssp HHHH----------HHSCSEEEEEEEEEE
T ss_pred HHHH----------hcCCCeEEEEEEECC
Confidence 4443 334567888888766
No 56
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.19 E-value=7.8e-11 Score=115.01 Aligned_cols=85 Identities=26% Similarity=0.416 Sum_probs=78.3
Q ss_pred CCeEEEEEecCCCCceEEEEecC-------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLD-------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC 1198 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~-------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 1198 (1659)
..++.|.|.+...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..
T Consensus 6 ~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (101)
T 2jik_A 6 VTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 85 (101)
T ss_dssp EEEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred CccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 46789999999999999999973 3699999999999999999 999999999999999999999999999988
Q ss_pred CCeEEEEEEecCC
Q psy3835 1199 GNSITMLVQYSPD 1211 (1659)
Q Consensus 1199 ~~~v~l~v~r~~~ 1211 (1659)
+..+.|+|.|++.
T Consensus 86 g~~v~l~v~R~~~ 98 (101)
T 2jik_A 86 GYAVSLRVQHRLE 98 (101)
T ss_dssp CSEEEEEEEEESC
T ss_pred CCeEEEEEEeCCC
Confidence 8899999998765
No 57
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.19 E-value=1.1e-10 Score=111.70 Aligned_cols=82 Identities=28% Similarity=0.353 Sum_probs=73.7
Q ss_pred CeEEEEEecCCCCceEEEEecC-CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD-SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLV 1206 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 1206 (1659)
.++.|.|.+.+.+|||++.++. ..|++|..|.++|||+++||++||.|++|||.++.++++.++..+++.++..+.+++
T Consensus 3 ~~r~v~l~r~~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~ 82 (91)
T 1g9o_A 3 LPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLV 82 (91)
T ss_dssp CCEEEEEECBTTBCCEEEEECTTCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred ccEEEEEEeCCCcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEE
Confidence 5789999999999999998874 479999999999999999999999999999999999999999999998777666666
Q ss_pred Eec
Q psy3835 1207 QYS 1209 (1659)
Q Consensus 1207 ~r~ 1209 (1659)
.+.
T Consensus 83 ~~r 85 (91)
T 1g9o_A 83 VDP 85 (91)
T ss_dssp ECC
T ss_pred EcC
Confidence 543
No 58
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=7.5e-11 Score=119.01 Aligned_cols=92 Identities=24% Similarity=0.350 Sum_probs=82.1
Q ss_pred CCCCCCCCCeEEEEEecCCCCceEEEEecC-------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHH
Q psy3835 1120 CSHKPHPGELRRVHIDKSVEPLGIQIQCLD-------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLA 1191 (1659)
Q Consensus 1120 ~~~~~~~~~~~~v~l~k~~~~lG~sl~~~~-------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~ 1191 (1659)
.+....+..++.|.|.+...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++
T Consensus 9 ~g~~~~~~~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 88 (120)
T 2eno_A 9 NGRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDA 88 (120)
T ss_dssp SSCCCEEEEEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHH
T ss_pred CCCCCCCCceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 333444567899999999999999999863 4699999999999999999 99999999999999999999999
Q ss_pred HHHHHhCCCeEEEEEEecCC
Q psy3835 1192 ASVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1192 ~~~l~~~~~~v~l~v~r~~~ 1211 (1659)
...++.++..|.|+|.|++.
T Consensus 89 ~~~~~~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 89 VDLFRNAGYAVSLRVQHRLQ 108 (120)
T ss_dssp HHHHHHHCSEEEEEEEEEEE
T ss_pred HHHHHcCCCeEEEEEEeCCc
Confidence 99999888999999999765
No 59
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.18 E-value=2.4e-11 Score=118.88 Aligned_cols=89 Identities=24% Similarity=0.456 Sum_probs=73.2
Q ss_pred cceeEEEEEeccCCCCCCccCeeecCCCCCCCCCCCccEEEEeeccCCccC--Ccccccceeeeeccc-cchhhhh-HHH
Q psy3835 58 EWDTEVLDMNLTNLSPNEALGLELVGGRDDPFYPNDSSIYVSNIVKGSVTD--GKLKKKEEVARIKKQ-CEDMNQE-KNT 133 (1659)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~p~~~~d~~i~v~~v~~g~~a~--g~l~~~d~i~~vn~~-~~~~~~~-~~~ 133 (1659)
+|++..|.+..+ ..||||.|.||.|.|+.+++.|+||+.|.+||+|+ |+|++||.|++|||+ +.++++. ++.
T Consensus 2 ~~~~~~v~l~k~----~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 77 (102)
T 2i1n_A 2 MFKYEEIVLERG----NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVE 77 (102)
T ss_dssp CEEEEEEEEECB----TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHH
T ss_pred CceEEEEEEEEC----CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 688888877652 46999999999999999999999999999999776 779999999999999 8887776 433
Q ss_pred HHHhhcchhHHHHhhcccceeeeehhh
Q psy3835 134 ALRERNGLKQQCTAAIRQWDIALRERN 160 (1659)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~v~r~~ 160 (1659)
+ +......+.|+|.|..
T Consensus 78 ~----------~~~~g~~v~l~v~R~~ 94 (102)
T 2i1n_A 78 A----------LKEAGPVVRLVVRRRQ 94 (102)
T ss_dssp H----------HHHSCSEEEEEEEEEC
T ss_pred H----------HHcCCCeEEEEEEeCC
Confidence 3 3344567788887765
No 60
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.18 E-value=7.9e-11 Score=111.00 Aligned_cols=83 Identities=14% Similarity=0.196 Sum_probs=72.3
Q ss_pred CCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhh-cCCCCCCEEEEECCeeCCCcCHHHHHHHHcC--CCCeEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAK--PADKVT 1312 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~-~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~--~~~~v~ 1312 (1659)
.++.|.|.|.. ++|||+|.++....+||++|.+||+|++ +.|++||.|++|||+++.+++|.+++.+|++ .+..++
T Consensus 5 ~~k~V~l~K~~-~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~ 83 (95)
T 3gge_A 5 IEKEVNVYKSE-DSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFT 83 (95)
T ss_dssp EEEEEEEECCS-SCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEE
T ss_pred eEEEEEEEECC-CCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEE
Confidence 45778999976 6999999975556799999999999999 6699999999999999999999999999987 456888
Q ss_pred EEEEeCc
Q psy3835 1313 VLAQYSV 1319 (1659)
Q Consensus 1313 L~v~r~~ 1319 (1659)
|.+.+..
T Consensus 84 L~lv~p~ 90 (95)
T 3gge_A 84 MKLIEPK 90 (95)
T ss_dssp EEEEEEC
T ss_pred EEEECcc
Confidence 8887653
No 61
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=7.9e-11 Score=111.69 Aligned_cols=83 Identities=27% Similarity=0.381 Sum_probs=74.9
Q ss_pred eEEEEEecC-CCCceEEEEecCCCcEEEEEeCCCChhhh-cCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEE
Q psy3835 1129 LRRVHIDKS-VEPLGIQIQCLDSGGVFVSTVSEHSLASQ-VGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLV 1206 (1659)
Q Consensus 1129 ~~~v~l~k~-~~~lG~sl~~~~~~gv~I~~V~~gs~A~~-~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 1206 (1659)
.+.|.|.|. +.+|||++.++..++++|..|.++|||++ +||++||+|++|||.++.++++.++..+++.....++|+|
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v 81 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKI 81 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEE
T ss_pred eEEEEEEeCCCCceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 578999998 58999999986567899999999999999 7799999999999999999999999999998766899999
Q ss_pred EecCC
Q psy3835 1207 QYSPD 1211 (1659)
Q Consensus 1207 ~r~~~ 1211 (1659)
.|...
T Consensus 82 ~r~~~ 86 (88)
T 1kwa_A 82 VPSYR 86 (88)
T ss_dssp ECCCC
T ss_pred ECCcC
Confidence 87654
No 62
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=1.3e-10 Score=115.24 Aligned_cols=89 Identities=26% Similarity=0.387 Sum_probs=80.9
Q ss_pred CCCCCeEEEEEecCCCCceEEEEecC-----CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHh
Q psy3835 1124 PHPGELRRVHIDKSVEPLGIQIQCLD-----SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQ 1197 (1659)
Q Consensus 1124 ~~~~~~~~v~l~k~~~~lG~sl~~~~-----~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 1197 (1659)
+.+++.+.|.|.+...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.
T Consensus 4 ~~~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 83 (110)
T 1um1_A 4 GSSGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRH 83 (110)
T ss_dssp CSCCCEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHT
T ss_pred CCCCcEEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34568899999999999999999862 4689999999999999999 99999999999999999999999999999
Q ss_pred CCCeEEEEEEecCCc
Q psy3835 1198 CGNSITMLVQYSPDK 1212 (1659)
Q Consensus 1198 ~~~~v~l~v~r~~~~ 1212 (1659)
.+..+.|.|.|++..
T Consensus 84 ~~~~v~l~v~R~~~~ 98 (110)
T 1um1_A 84 GGKKMRFLVAKSDVE 98 (110)
T ss_dssp CCSEEEEEEECCCHH
T ss_pred CCCeEEEEEEeCCcc
Confidence 899999999997753
No 63
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=6.8e-11 Score=118.47 Aligned_cols=86 Identities=24% Similarity=0.378 Sum_probs=79.0
Q ss_pred CCCeEEEEEecCCCCceEEEEecC-----CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCC
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLD-----SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCG 1199 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~-----~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 1199 (1659)
...++.|.|.|...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++..++.++
T Consensus 23 ~~~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 102 (117)
T 2fne_A 23 MPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK 102 (117)
T ss_dssp CCEEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 457789999999999999999872 3589999999999999999 9999999999999999999999999999888
Q ss_pred CeEEEEEEecCC
Q psy3835 1200 NSITMLVQYSPD 1211 (1659)
Q Consensus 1200 ~~v~l~v~r~~~ 1211 (1659)
..|+|+|.|++.
T Consensus 103 ~~v~l~v~R~g~ 114 (117)
T 2fne_A 103 GTVTLMVLSSDE 114 (117)
T ss_dssp SSEEEEEEECSC
T ss_pred CeEEEEEEeCCc
Confidence 889999999765
No 64
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.18 E-value=7.4e-11 Score=113.30 Aligned_cols=85 Identities=28% Similarity=0.451 Sum_probs=77.4
Q ss_pred CCeEEEEEecCCCCceEEEEecC--CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLD--SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
..++.|.|.+...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+.
T Consensus 4 ~~~r~v~l~k~~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 83 (93)
T 2dkr_A 4 GSSGVVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVK 83 (93)
T ss_dssp SCSCEEEEECCTTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEEEeCCCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 45789999999999999999863 5699999999999999996 99999999999999999999999999998888999
Q ss_pred EEEEecCC
Q psy3835 1204 MLVQYSPD 1211 (1659)
Q Consensus 1204 l~v~r~~~ 1211 (1659)
|+|.|++.
T Consensus 84 l~v~r~~~ 91 (93)
T 2dkr_A 84 LVVRSGPS 91 (93)
T ss_dssp EEECCCCS
T ss_pred EEEEeCCC
Confidence 99988764
No 65
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.18 E-value=1.1e-10 Score=114.15 Aligned_cols=84 Identities=19% Similarity=0.332 Sum_probs=77.9
Q ss_pred CeEEEEEecCCCCceEEEEecC-------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCC
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD-------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCG 1199 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~-------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 1199 (1659)
+.+.|.|.+...+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.++
T Consensus 4 ~~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 83 (102)
T 2i1n_A 4 KYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAG 83 (102)
T ss_dssp EEEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred eEEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4688999999999999999873 4699999999999999999 9999999999999999999999999999989
Q ss_pred CeEEEEEEecCC
Q psy3835 1200 NSITMLVQYSPD 1211 (1659)
Q Consensus 1200 ~~v~l~v~r~~~ 1211 (1659)
..+.|.|.|++.
T Consensus 84 ~~v~l~v~R~~~ 95 (102)
T 2i1n_A 84 PVVRLVVRRRQP 95 (102)
T ss_dssp SEEEEEEEEECC
T ss_pred CeEEEEEEeCCC
Confidence 999999999876
No 66
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.17 E-value=9e-11 Score=113.15 Aligned_cols=85 Identities=21% Similarity=0.268 Sum_probs=76.5
Q ss_pred CCeEEEEEecCCCCceEEEEecC-CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEE
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLD-SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITML 1205 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 1205 (1659)
..++.|.|.+...+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++..+++..+..+.++
T Consensus 4 ~~~r~v~l~~~~~~~G~~l~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~ 83 (95)
T 3r68_A 4 HQPRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLL 83 (95)
T ss_dssp CCCEEEEEECBTTBCSCEEEEC--CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEE
T ss_pred CCcEEEEEecCCCcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 46789999999999999999874 34999999999999999999999999999999999999999999999988888888
Q ss_pred EEecCC
Q psy3835 1206 VQYSPD 1211 (1659)
Q Consensus 1206 v~r~~~ 1211 (1659)
+.|...
T Consensus 84 ~~r~~~ 89 (95)
T 3r68_A 84 VLDKEL 89 (95)
T ss_dssp EEECC-
T ss_pred EECCcc
Confidence 887543
No 67
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.17 E-value=1.5e-10 Score=111.59 Aligned_cols=84 Identities=30% Similarity=0.489 Sum_probs=76.4
Q ss_pred CeEEEEEecC--CCCceEEEEec-CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1128 ELRRVHIDKS--VEPLGIQIQCL-DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1128 ~~~~v~l~k~--~~~lG~sl~~~-~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
+.+.|.|.|. +.+|||++.++ ...|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.++..+.
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 82 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVN 82 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred EEEEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 4678999986 36899999877 35699999999999999999 99999999999999999999999999998899999
Q ss_pred EEEEecCC
Q psy3835 1204 MLVQYSPD 1211 (1659)
Q Consensus 1204 l~v~r~~~ 1211 (1659)
|.|.|++.
T Consensus 83 l~v~R~~~ 90 (95)
T 2vwr_A 83 LTIARPGK 90 (95)
T ss_dssp EEEEEESC
T ss_pred EEEEcCCc
Confidence 99999775
No 68
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.17 E-value=1.2e-10 Score=110.34 Aligned_cols=82 Identities=33% Similarity=0.470 Sum_probs=73.8
Q ss_pred CCeEEEEEecC-CCCceEEEEecC--CCcEEEEEeCCCChhhh-cCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeE
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCLD--SGGVFVSTVSEHSLASQ-VGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSI 1202 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~-~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 1202 (1659)
++++.|.|.+. ..+|||++.++. ..|++|..|.++|||++ +||++||+|++|||.++.++++.++..+++.++..+
T Consensus 1 g~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 80 (87)
T 4e34_A 1 GPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEI 80 (87)
T ss_dssp CCCEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred CCEEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 35789999997 579999999873 35799999999999999 699999999999999999999999999999999999
Q ss_pred EEEEEe
Q psy3835 1203 TMLVQY 1208 (1659)
Q Consensus 1203 ~l~v~r 1208 (1659)
+|+|.+
T Consensus 81 ~l~v~~ 86 (87)
T 4e34_A 81 EFEVVY 86 (87)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998864
No 69
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=7.8e-11 Score=118.11 Aligned_cols=85 Identities=22% Similarity=0.318 Sum_probs=77.9
Q ss_pred CCeEEEEEecCCCCceEEEEecC-------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLD-------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC 1198 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~-------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 1198 (1659)
.+.+.|.+.+...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++.+
T Consensus 23 ~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 102 (117)
T 2byg_A 23 MTVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT 102 (117)
T ss_dssp EEEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 46788999998899999999862 3589999999999999999 999999999999999999999999999988
Q ss_pred CCeEEEEEEecCC
Q psy3835 1199 GNSITMLVQYSPD 1211 (1659)
Q Consensus 1199 ~~~v~l~v~r~~~ 1211 (1659)
+..|+|+|.|.+.
T Consensus 103 g~~v~l~v~R~~~ 115 (117)
T 2byg_A 103 SEVVYLKVGKPTT 115 (117)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEeCCc
Confidence 9999999998754
No 70
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=3.4e-10 Score=114.68 Aligned_cols=87 Identities=18% Similarity=0.209 Sum_probs=79.0
Q ss_pred CCCCeEEEEEecCCCCceEEEEecC--CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHh--CC
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLD--SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQ--CG 1199 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~ 1199 (1659)
..++.+.|.+.+...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++. .+
T Consensus 16 ~~~~~~~v~l~~~~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g 95 (123)
T 1ueq_A 16 LKGTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIG 95 (123)
T ss_dssp CCSEEEEEEEECCTTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTT
T ss_pred CCCcEEEEEEEeCCCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 4567788999999999999999863 5689999999999999999 99999999999999999999999999988 47
Q ss_pred CeEEEEEEecCC
Q psy3835 1200 NSITMLVQYSPD 1211 (1659)
Q Consensus 1200 ~~v~l~v~r~~~ 1211 (1659)
..|.|+|.|+..
T Consensus 96 ~~v~l~v~R~~~ 107 (123)
T 1ueq_A 96 QSVNLVLCRGYP 107 (123)
T ss_dssp CEEEEEEEESCC
T ss_pred CeEEEEEEeCCC
Confidence 899999999765
No 71
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.17 E-value=3.1e-11 Score=115.39 Aligned_cols=85 Identities=21% Similarity=0.371 Sum_probs=75.2
Q ss_pred CCeEEEEEecCCCCceEEEEec-CCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEE
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCL-DSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITML 1205 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~-~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 1205 (1659)
..++.|.|.+...+|||++.+. ...|++|..|.++|||+++||++||+|++|||.++.++++.++..+++..+..+.|+
T Consensus 2 ~~pr~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 81 (91)
T 2vsp_A 2 MKPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLL 81 (91)
T ss_dssp CCEEEEEEECBTTBTSCCCBCCTTCSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEE
T ss_pred CCcEEEEEEeCCCcccEEEEeccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 4689999999988999999876 356899999999999999999999999999999999999999999999888999999
Q ss_pred EEecCC
Q psy3835 1206 VQYSPD 1211 (1659)
Q Consensus 1206 v~r~~~ 1211 (1659)
|.|.+.
T Consensus 82 v~r~~~ 87 (91)
T 2vsp_A 82 VCGKKA 87 (91)
T ss_dssp EEC---
T ss_pred EEeCCc
Confidence 998764
No 72
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.16 E-value=1.3e-10 Score=112.48 Aligned_cols=84 Identities=30% Similarity=0.464 Sum_probs=77.2
Q ss_pred CeEEEEEecCCCCceEEEEecC------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCC
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGN 1200 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 1200 (1659)
+.+.|.+.+...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.++.
T Consensus 3 ~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 82 (97)
T 2jil_A 3 RTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQ 82 (97)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCS
T ss_pred eEEEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3577889998899999999873 4699999999999999999 99999999999999999999999999998899
Q ss_pred eEEEEEEecCC
Q psy3835 1201 SITMLVQYSPD 1211 (1659)
Q Consensus 1201 ~v~l~v~r~~~ 1211 (1659)
.+.|.|.|++.
T Consensus 83 ~v~l~v~R~~~ 93 (97)
T 2jil_A 83 EAALLIEYDVS 93 (97)
T ss_dssp EEEEEEEEECC
T ss_pred eEEEEEEeCCC
Confidence 99999999875
No 73
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.16 E-value=1.4e-10 Score=110.50 Aligned_cols=82 Identities=32% Similarity=0.426 Sum_probs=75.0
Q ss_pred CCeEEEEEecC-CCCceEEEEecC--CCcEEEEEeCCCChhhhc-CCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeE
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCLD--SGGVFVSTVSEHSLASQV-GLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSI 1202 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~-GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 1202 (1659)
..++.|.+.+. ..+|||++.++. ..|++|..|.++|||+++ ||++||+|++|||.++.++++.++...++.++..+
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v 82 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEV 82 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 35789999996 689999999873 468999999999999999 79999999999999999999999999999988999
Q ss_pred EEEEEe
Q psy3835 1203 TMLVQY 1208 (1659)
Q Consensus 1203 ~l~v~r 1208 (1659)
+|.|.|
T Consensus 83 ~l~v~r 88 (90)
T 1qav_A 83 VLEVKY 88 (90)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999976
No 74
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.16 E-value=1.4e-10 Score=112.16 Aligned_cols=84 Identities=21% Similarity=0.337 Sum_probs=77.2
Q ss_pred CeEEEEEecCCCCceEEEEecC----CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD----SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~----~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
.++.|.|.+...+|||++.+.. ..|++|..|.++|||+++||++||.|++|||.++.++++.++..+++..+..+.
T Consensus 3 ~~r~v~l~k~~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 82 (96)
T 2v90_A 3 KPRCLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCVS 82 (96)
T ss_dssp CCEEEEEECBTTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEE
T ss_pred CCEEEEEEeCCCcccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 5789999999999999998852 348999999999999999999999999999999999999999999998889999
Q ss_pred EEEEecCC
Q psy3835 1204 MLVQYSPD 1211 (1659)
Q Consensus 1204 l~v~r~~~ 1211 (1659)
|.|.|++.
T Consensus 83 l~v~r~~~ 90 (96)
T 2v90_A 83 LTVVDPEA 90 (96)
T ss_dssp EEEECCCT
T ss_pred EEEECCCC
Confidence 99998765
No 75
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=2.6e-10 Score=114.51 Aligned_cols=91 Identities=47% Similarity=0.676 Sum_probs=82.6
Q ss_pred CCCCCeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1124 PHPGELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1124 ~~~~~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
+..++++.|.+.+...+|||++.++.+.|++|..|.++|||+++||++||+|++|||.++.++++.++...+..++..+.
T Consensus 15 ~~l~~~~~v~l~~~~~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~ 94 (117)
T 1uit_A 15 PYVEEPRHVKVQKGSEPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTIT 94 (117)
T ss_dssp CCSCCCEEEEEECSSCCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEE
T ss_pred ccCCCCEEEEEEeCCCCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 34467889999999999999999887789999999999999999999999999999999999999998887888889999
Q ss_pred EEEEecCCccc
Q psy3835 1204 MLVQYSPDKYH 1214 (1659)
Q Consensus 1204 l~v~r~~~~~~ 1214 (1659)
|+|.|++..+.
T Consensus 95 l~v~r~~~~~~ 105 (117)
T 1uit_A 95 ILAQYNPHVHQ 105 (117)
T ss_dssp EEECCCSCCCC
T ss_pred EEEEECCchhh
Confidence 99999887554
No 76
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.16 E-value=1.5e-10 Score=118.58 Aligned_cols=86 Identities=24% Similarity=0.347 Sum_probs=77.4
Q ss_pred CCCeEEEEEecC-CCCceEEEEecCCC--------------cEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHH
Q psy3835 1126 PGELRRVHIDKS-VEPLGIQIQCLDSG--------------GVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQL 1190 (1659)
Q Consensus 1126 ~~~~~~v~l~k~-~~~lG~sl~~~~~~--------------gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~ 1190 (1659)
...++.|.|.+. ..+|||+|.++... |++|..|.++|||+++||++||+|++|||.++.++++.+
T Consensus 25 ~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~ 104 (132)
T 3l4f_D 25 IIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQ 104 (132)
T ss_dssp CCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHH
T ss_pred CCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH
Confidence 346789999996 58999999998532 799999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEEEecCC
Q psy3835 1191 AASVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1191 ~~~~l~~~~~~v~l~v~r~~~ 1211 (1659)
++.+++.++..+.|+|.+...
T Consensus 105 ~~~~l~~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 105 VVNMIRQGGNTLMVKVVMVTR 125 (132)
T ss_dssp HHHHHHHTTTEEEEEEECCCC
T ss_pred HHHHHHcCCCEEEEEEEECCC
Confidence 999999999999999987654
No 77
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.15 E-value=1e-10 Score=117.22 Aligned_cols=85 Identities=24% Similarity=0.329 Sum_probs=77.4
Q ss_pred CCCeEEEEEecC-CCCceEEEEecC-----CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC
Q psy3835 1126 PGELRRVHIDKS-VEPLGIQIQCLD-----SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC 1198 (1659)
Q Consensus 1126 ~~~~~~v~l~k~-~~~lG~sl~~~~-----~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 1198 (1659)
+..++.|.+.+. ..+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++.+
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 101 (118)
T 3b76_A 22 SMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT 101 (118)
T ss_dssp EEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC
T ss_pred CCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 356788999988 589999999873 4589999999999999999 999999999999999999999999999999
Q ss_pred CCeEEEEEEecC
Q psy3835 1199 GNSITMLVQYSP 1210 (1659)
Q Consensus 1199 ~~~v~l~v~r~~ 1210 (1659)
+..|+|+|.|..
T Consensus 102 ~~~v~L~v~R~~ 113 (118)
T 3b76_A 102 SSSIVLKALEVK 113 (118)
T ss_dssp CSEEEEEEEEEE
T ss_pred CCeEEEEEEECC
Confidence 999999998754
No 78
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.1e-10 Score=114.77 Aligned_cols=85 Identities=28% Similarity=0.456 Sum_probs=78.1
Q ss_pred CCeEEEEEecCCCCceEEEEecC--------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHh
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLD--------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQ 1197 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~--------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 1197 (1659)
.+.+.|.|.+...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++.
T Consensus 6 ~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 85 (105)
T 1wha_A 6 SGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTA 85 (105)
T ss_dssp CEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTS
T ss_pred CeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 46788999999899999999873 3699999999999999999 99999999999999999999999999998
Q ss_pred CCCeEEEEEEecCC
Q psy3835 1198 CGNSITMLVQYSPD 1211 (1659)
Q Consensus 1198 ~~~~v~l~v~r~~~ 1211 (1659)
.+..|.|+|.|++.
T Consensus 86 ~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 86 ASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEEEEECCC
T ss_pred CCCeEEEEEEECCC
Confidence 88999999999764
No 79
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.15 E-value=2.3e-10 Score=113.09 Aligned_cols=86 Identities=20% Similarity=0.239 Sum_probs=75.7
Q ss_pred CCCCeEEEEEecCCCCceEEEEecC----CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCC
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLD----SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCG 1199 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~----~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 1199 (1659)
.+...+.|.+.+. .+|||+|.++. ..+++|..|.++|||+++| |++||+|++|||.++.+++|.+++.+|+.+.
T Consensus 12 ~~~~~~~v~l~k~-~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 12 RDPAFRVITVTKE-TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp CCTTEEEEEECCS-SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CCCcEEEEEEeCC-CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 4457889999886 89999999873 2379999999999999999 9999999999999999999999999998764
Q ss_pred ----CeEEEEEEecCC
Q psy3835 1200 ----NSITMLVQYSPD 1211 (1659)
Q Consensus 1200 ----~~v~l~v~r~~~ 1211 (1659)
..++|.|.|++.
T Consensus 91 ~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 91 LRSESPWEIAFIRSGP 106 (109)
T ss_dssp CSSSSCEEEEEECCCC
T ss_pred cCCCceEEEEEEeCCC
Confidence 688888888654
No 80
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.6e-10 Score=116.03 Aligned_cols=87 Identities=26% Similarity=0.330 Sum_probs=77.9
Q ss_pred CCCeEEEEEecCC-------CCceEEEEecCC-------CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHH
Q psy3835 1126 PGELRRVHIDKSV-------EPLGIQIQCLDS-------GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQL 1190 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~-------~~lG~sl~~~~~-------~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~ 1190 (1659)
+...+.|.+.+.. .+|||+|.++.. .|++|..|.++|||+++| |++||+|++|||.++.++++.+
T Consensus 10 ~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~ 89 (117)
T 1ujd_A 10 IFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE 89 (117)
T ss_dssp SSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH
T ss_pred CCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH
Confidence 3456788888876 799999998732 389999999999999999 9999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEEEecCCc
Q psy3835 1191 AASVLRQCGNSITMLVQYSPDK 1212 (1659)
Q Consensus 1191 ~~~~l~~~~~~v~l~v~r~~~~ 1212 (1659)
++.+++.++..|+|+|.|++..
T Consensus 90 ~~~~l~~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 90 VQSIISQQSGEAEICVRLDLNM 111 (117)
T ss_dssp HHHHHSCCSSCEEEEEESSCCC
T ss_pred HHHHHhcCCCEEEEEEEECCcc
Confidence 9999999999999999998763
No 81
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.3e-10 Score=114.61 Aligned_cols=86 Identities=35% Similarity=0.498 Sum_probs=78.3
Q ss_pred CCCeEEEEEecCCCCceEEEEec--------CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHH
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCL--------DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLR 1196 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~--------~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 1196 (1659)
..+.+.|.|.+...+|||+|.++ ...|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++
T Consensus 7 ~~~~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 86 (107)
T 1wf8_A 7 GLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLR 86 (107)
T ss_dssp CEEEEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHH
T ss_pred CceEEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 35678899999999999999982 24689999999999999999 9999999999999999999999999999
Q ss_pred hCCCeEEEEEEecCC
Q psy3835 1197 QCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1197 ~~~~~v~l~v~r~~~ 1211 (1659)
.++..|.|+|.|...
T Consensus 87 ~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 87 NTKGNVRFVIGREKP 101 (107)
T ss_dssp HCCSEEEEEEEEECC
T ss_pred cCCCeEEEEEEeCCC
Confidence 999999999998765
No 82
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.15 E-value=1.8e-10 Score=113.50 Aligned_cols=87 Identities=26% Similarity=0.354 Sum_probs=77.4
Q ss_pred CCCeEEEEEecCCCCceEEEEec-----CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCC
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCL-----DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCG 1199 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~-----~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 1199 (1659)
..+...|.+ +...+|||+|.++ ...|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.++
T Consensus 9 ~~~~~~v~l-~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 87 (106)
T 3axa_A 9 EPEIITVTL-KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS 87 (106)
T ss_dssp -CCEEEEEE-ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CceEEEEEE-CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 346677888 7889999999875 34689999999999999999 9999999999999999999999999999899
Q ss_pred CeEEEEEEecCCcc
Q psy3835 1200 NSITMLVQYSPDKY 1213 (1659)
Q Consensus 1200 ~~v~l~v~r~~~~~ 1213 (1659)
..+.|.|.|++..+
T Consensus 88 ~~v~l~v~R~~~~~ 101 (106)
T 3axa_A 88 SVVTLEVAKQGAIR 101 (106)
T ss_dssp SEEEEEEECCCSSC
T ss_pred CeEEEEEEeCCccc
Confidence 99999999987643
No 83
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.15 E-value=2e-10 Score=115.26 Aligned_cols=90 Identities=33% Similarity=0.481 Sum_probs=81.1
Q ss_pred CCCCCCCeEEEEecCCcCccCeEEecCCC-----------cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHH
Q psy3835 1231 GRGSGEPRFLMIETRKCSNLGISLVGGNA-----------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAE 1298 (1659)
Q Consensus 1231 ~~~~~~~~~v~l~k~~~~~lGi~l~gg~~-----------~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~ 1298 (1659)
...|..++.|.|.+....+|||++.++.+ .|++|..|.++|||+++| |++||+|++|||+++.++++.
T Consensus 10 ~~~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~ 89 (117)
T 2ehr_A 10 FSHWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHS 89 (117)
T ss_dssp SSCBCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHH
T ss_pred cccCCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 35577899999999987899999998753 489999999999999998 999999999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1299 EAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1299 ~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
+++..++..+..+.|+|.|...
T Consensus 90 ~~~~~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 90 EAVEAIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHHHHHHTSCSSEEEEECCBSC
T ss_pred HHHHHHHcCCCeEEEEEEECCC
Confidence 9999998889999999988644
No 84
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.15 E-value=1.9e-10 Score=116.65 Aligned_cols=89 Identities=21% Similarity=0.413 Sum_probs=81.2
Q ss_pred CCCeEEEEEecCCCCceEEEEecC---CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLD---SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNS 1201 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~---~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 1201 (1659)
+++.+.|.|.+...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++..++.++..
T Consensus 23 ~~~~~~v~l~k~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~ 102 (124)
T 2daz_A 23 PGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSK 102 (124)
T ss_dssp SSEEEEEEEECCSSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSE
T ss_pred CCceEEEEEEeCCCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 467899999999999999999873 3599999999999999999 999999999999999999999999999988889
Q ss_pred EEEEEEecCCccc
Q psy3835 1202 ITMLVQYSPDKYH 1214 (1659)
Q Consensus 1202 v~l~v~r~~~~~~ 1214 (1659)
|.|+|.|.+....
T Consensus 103 v~l~v~R~~~~~~ 115 (124)
T 2daz_A 103 VKLVFIRNEDAVN 115 (124)
T ss_dssp EEEEEEECTTHHH
T ss_pred EEEEEEeCCCccc
Confidence 9999999877543
No 85
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.15 E-value=9.2e-11 Score=112.85 Aligned_cols=84 Identities=20% Similarity=0.284 Sum_probs=75.0
Q ss_pred CCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
.-++.+.|.|..+.+||+++..+...|++|.+|.+||||+++| |++||+|++|||.++.+++..++...+...++.++|
T Consensus 11 ~~~~~v~l~K~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L 90 (97)
T 2ejy_A 11 HMVRLIQFEKVTEEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISL 90 (97)
T ss_dssp --CEEEEEEECSSSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEE
T ss_pred CccEEEEEEeCCCCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 4578999999988999999987656799999999999999998 999999999999999998888888888877889999
Q ss_pred EEEeC
Q psy3835 1314 LAQYS 1318 (1659)
Q Consensus 1314 ~v~r~ 1318 (1659)
+|.+.
T Consensus 91 ~V~~~ 95 (97)
T 2ejy_A 91 KVIPN 95 (97)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 99875
No 86
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.14 E-value=2e-10 Score=109.05 Aligned_cols=82 Identities=23% Similarity=0.349 Sum_probs=73.4
Q ss_pred CeEEEEEecCCCCceEEEEecC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITML 1205 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 1205 (1659)
..+.|.+ +.+.+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++..+++..+..+.|+
T Consensus 3 ~~~~v~l-~~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~ 81 (88)
T 2uzc_A 3 SNYSVSL-VGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMT 81 (88)
T ss_dssp CEEEEEE-ESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEE
T ss_pred cEEEEEE-cCCCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 3567778 66789999999873 45899999999999999999999999999999999999999999998888999999
Q ss_pred EEecC
Q psy3835 1206 VQYSP 1210 (1659)
Q Consensus 1206 v~r~~ 1210 (1659)
|.|++
T Consensus 82 v~R~g 86 (88)
T 2uzc_A 82 LQRES 86 (88)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 98865
No 87
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=1.2e-10 Score=115.19 Aligned_cols=87 Identities=29% Similarity=0.536 Sum_probs=79.8
Q ss_pred CCCCeEEEEEecCCCCceEEEE-----ec-----CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHH
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQ-----CL-----DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAAS 1193 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~-----~~-----~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~ 1193 (1659)
.+++.+.|.|.+.+.+|||+|. ++ ...|++|..|.++|||+++| |++||+|++|||.++.++++.++..
T Consensus 6 ~~~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 85 (108)
T 1q7x_A 6 KPGDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVE 85 (108)
T ss_dssp CSSSEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHH
T ss_pred CCCcEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4578899999999999999999 65 24699999999999999999 9999999999999999999999999
Q ss_pred HHHhCCCeEEEEEEecCC
Q psy3835 1194 VLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1194 ~l~~~~~~v~l~v~r~~~ 1211 (1659)
.++.++..+.|+|.|++.
T Consensus 86 ~~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 86 TLRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHHHTTSEEEEEEECCCC
T ss_pred HHHcCCCeEEEEEEeCCc
Confidence 999999999999998765
No 88
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.14 E-value=1.8e-10 Score=114.59 Aligned_cols=87 Identities=15% Similarity=0.380 Sum_probs=78.3
Q ss_pred CCCCeEEEEEecCCCCceEEEEecC--CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLD--SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNS 1201 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 1201 (1659)
.+.+.+.|.+.+...+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.++..
T Consensus 21 ~~~~~~~v~l~~~~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~ 100 (112)
T 2r4h_A 21 QSMDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRR 100 (112)
T ss_dssp --CCEEEEEEECBTTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCCceEEEEEEcCCCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3467899999999889999999873 5699999999999999999 999999999999999999999999999888899
Q ss_pred EEEEEEecCC
Q psy3835 1202 ITMLVQYSPD 1211 (1659)
Q Consensus 1202 v~l~v~r~~~ 1211 (1659)
|.|+|.|++.
T Consensus 101 v~l~v~R~~~ 110 (112)
T 2r4h_A 101 VRLFLKRGET 110 (112)
T ss_dssp EEEEEECCEE
T ss_pred EEEEEEeCCc
Confidence 9999988653
No 89
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=1.7e-10 Score=110.22 Aligned_cols=82 Identities=24% Similarity=0.303 Sum_probs=75.0
Q ss_pred CeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQ 1207 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~ 1207 (1659)
.++.|.|.+...+|||++.+. .|++|..|.++|||+++||++||.|++|||.++.++++.++..+++..+..+.|+|.
T Consensus 3 ~~r~v~l~~~~~g~G~~l~~~--~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~ 80 (91)
T 2f5y_A 3 RYRQITIPRGKDGFGFTICCD--SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVW 80 (91)
T ss_dssp EEEEEEEECBTTBTSEEEECS--SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEE
T ss_pred ceEEEEEEeCCCCccEEEecC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 468999999999999999864 579999999999999999999999999999999999999999999888889999999
Q ss_pred ecCC
Q psy3835 1208 YSPD 1211 (1659)
Q Consensus 1208 r~~~ 1211 (1659)
|...
T Consensus 81 R~~~ 84 (91)
T 2f5y_A 81 RMVP 84 (91)
T ss_dssp ECC-
T ss_pred eCCC
Confidence 9765
No 90
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.14 E-value=2.9e-10 Score=111.59 Aligned_cols=85 Identities=29% Similarity=0.388 Sum_probs=77.2
Q ss_pred CCCeEEEEEecCC-CCceEEEEecC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeE
Q psy3835 1126 PGELRRVHIDKSV-EPLGIQIQCLD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSI 1202 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~-~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 1202 (1659)
+..++.|.|.+.. .+|||+|.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++..+++. +..+
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v 91 (104)
T 1wi2_A 13 QFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT-AREI 91 (104)
T ss_dssp SSCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH-SSSE
T ss_pred CCCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCEE
Confidence 3467999999985 89999999874 368999999999999999999999999999999999999999999998 7899
Q ss_pred EEEEEecCC
Q psy3835 1203 TMLVQYSPD 1211 (1659)
Q Consensus 1203 ~l~v~r~~~ 1211 (1659)
.|+|.|++.
T Consensus 92 ~l~v~r~~~ 100 (104)
T 1wi2_A 92 SMRVRFFSG 100 (104)
T ss_dssp EEEEECCCC
T ss_pred EEEEEECCC
Confidence 999998765
No 91
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.14 E-value=1.6e-10 Score=111.27 Aligned_cols=82 Identities=22% Similarity=0.403 Sum_probs=74.0
Q ss_pred CeEEEEEecC-CCCceEEEEecCCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEE
Q psy3835 1128 ELRRVHIDKS-VEPLGIQIQCLDSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITML 1205 (1659)
Q Consensus 1128 ~~~~v~l~k~-~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 1205 (1659)
-++.|.|.|. +.+|||++......|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..++|+
T Consensus 12 ~~~~v~l~K~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~ 91 (97)
T 2ejy_A 12 MVRLIQFEKVTEEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLK 91 (97)
T ss_dssp -CEEEEEEECSSSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEE
T ss_pred ccEEEEEEeCCCCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 3688999997 5799999998666899999999999999999 9999999999999999999999999999888889998
Q ss_pred EEec
Q psy3835 1206 VQYS 1209 (1659)
Q Consensus 1206 v~r~ 1209 (1659)
|.+.
T Consensus 92 V~~~ 95 (97)
T 2ejy_A 92 VIPN 95 (97)
T ss_dssp EECC
T ss_pred EEEC
Confidence 8743
No 92
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=1.9e-10 Score=112.94 Aligned_cols=87 Identities=17% Similarity=0.255 Sum_probs=79.0
Q ss_pred CCCCeEEEEEecCCCCceEEEEecC----CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCC
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLD----SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCG 1199 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~----~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 1199 (1659)
.....+.|.|.+...+|||+|.++. ..+++|..|.+++||+++| |++||+|++|||.++.++++.++..+++.++
T Consensus 8 ~~~~~~~v~l~~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 87 (104)
T 2djt_A 8 QASGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGG 87 (104)
T ss_dssp SCCCCEEEEEECCSSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTC
T ss_pred CCCceEEEEEEeCCCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3457789999999999999999862 5689999999999999999 9999999999999999999999999998888
Q ss_pred CeEEEEEEecCC
Q psy3835 1200 NSITMLVQYSPD 1211 (1659)
Q Consensus 1200 ~~v~l~v~r~~~ 1211 (1659)
..|.|+|.|++.
T Consensus 88 ~~v~l~v~R~g~ 99 (104)
T 2djt_A 88 PQLHLVIRRPLS 99 (104)
T ss_dssp SEEEEEECCCCC
T ss_pred CeEEEEEEECCC
Confidence 999999988765
No 93
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.14 E-value=2.1e-10 Score=112.31 Aligned_cols=86 Identities=31% Similarity=0.436 Sum_probs=75.6
Q ss_pred CCCeEEEEEecC-CCCceEEEEecC--CCcEEEEEeCCCChhhhc-CCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe
Q psy3835 1126 PGELRRVHIDKS-VEPLGIQIQCLD--SGGVFVSTVSEHSLASQV-GLQVGDQLLEVCGINMRSATYQLAASVLRQCGNS 1201 (1659)
Q Consensus 1126 ~~~~~~v~l~k~-~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~-GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 1201 (1659)
++.++.|.+.+. +.+|||+|.++. ..|++|..|.++|||+++ ||++||+|++|||.++.++++.+++.+++.++..
T Consensus 7 ~~~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 86 (103)
T 2dc2_A 7 VGPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 86 (103)
T ss_dssp --CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSE
T ss_pred CCCcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 346788899887 489999999873 358999999999999996 8999999999999999999999999999999899
Q ss_pred EEEEEEecCC
Q psy3835 1202 ITMLVQYSPD 1211 (1659)
Q Consensus 1202 v~l~v~r~~~ 1211 (1659)
++|+|.+...
T Consensus 87 v~l~v~~~~~ 96 (103)
T 2dc2_A 87 IEFEVVYVAL 96 (103)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEEecCC
Confidence 9999998654
No 94
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=4.7e-10 Score=111.29 Aligned_cols=87 Identities=34% Similarity=0.476 Sum_probs=79.0
Q ss_pred CCCCeEEEEEecCCCCceEEEEec--------CCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHH
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCL--------DSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLR 1196 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~--------~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~ 1196 (1659)
.+.+.+.+.+.+...+|||+|.++ ...|++|..|.++|||+++||++||+|++|||.++.++++.++...++
T Consensus 12 ~~~~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~ 91 (110)
T 1x5q_A 12 IEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALR 91 (110)
T ss_dssp CCCEEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCcceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhh
Confidence 345678899999999999999976 247999999999999999999999999999999999999999998888
Q ss_pred hCCCeEEEEEEecCC
Q psy3835 1197 QCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1197 ~~~~~v~l~v~r~~~ 1211 (1659)
.++..|.|.|.|++.
T Consensus 92 ~~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 92 GAGTAVQMRVWRESG 106 (110)
T ss_dssp SCCSEEEEEEEECSS
T ss_pred CCCCeEEEEEEECCc
Confidence 889999999999876
No 95
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.13 E-value=2.8e-10 Score=109.21 Aligned_cols=84 Identities=20% Similarity=0.320 Sum_probs=75.7
Q ss_pred CCCCeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEE
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITM 1204 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 1204 (1659)
....++.|.|.+...+|||++.+ ..|++|..|.++|||+++||++||+|++|||.++.++++.+++..++ .+..|+|
T Consensus 5 ~~~~~r~v~l~~~~~~~G~~l~~--~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~l 81 (93)
T 2dls_A 5 SSGVQRCVIIQKDQHGFGFTVSG--DRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVAL 81 (93)
T ss_dssp CCCCEEEEEEECSSSSCCEEEEC--SSSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEEE
T ss_pred CCCCCEEEEEEeCCCceeEEEeC--CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEEE
Confidence 34578999999999999999986 36899999999999999999999999999999999999998888876 5899999
Q ss_pred EEEecCC
Q psy3835 1205 LVQYSPD 1211 (1659)
Q Consensus 1205 ~v~r~~~ 1211 (1659)
+|.|++.
T Consensus 82 ~v~R~~~ 88 (93)
T 2dls_A 82 TLLGSSS 88 (93)
T ss_dssp EEECCCC
T ss_pred EEEECCC
Confidence 9998764
No 96
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.13 E-value=1.6e-10 Score=113.47 Aligned_cols=91 Identities=40% Similarity=0.675 Sum_probs=80.6
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCCc-ceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNAV-GIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~~-gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
...++.+.+.+.. .+|||++.++... |++|..|.+||||+++| |++||+|++|||+++.++++.+++..+...++.+
T Consensus 9 ~~~~~~v~l~k~~-~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 87 (104)
T 3i4w_A 9 PREPRRIVIHRGS-TGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV 87 (104)
T ss_dssp CSSCEEEEEECBT-TBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEE
T ss_pred CCccEEEEEEeCC-CccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4567889999975 4899999987544 99999999999999999 9999999999999999999999998888889999
Q ss_pred EEEEEeCccccccc
Q psy3835 1312 TVLAQYSVERYNEV 1325 (1659)
Q Consensus 1312 ~L~v~r~~~~~~~~ 1325 (1659)
.|+|.|+++.|..+
T Consensus 88 ~l~v~r~~~~~~~~ 101 (104)
T 3i4w_A 88 TIIAQYKPEEYSRF 101 (104)
T ss_dssp EEEEEECHHHHHHH
T ss_pred EEEEEECcchhhhh
Confidence 99999998777654
No 97
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.13 E-value=2.3e-10 Score=109.80 Aligned_cols=84 Identities=26% Similarity=0.421 Sum_probs=75.8
Q ss_pred CeEEEEEecCCCCceEEEEecC-CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD-SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITML 1205 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 1205 (1659)
..+.|.+.|.+.+|||++.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.++..++|+
T Consensus 4 ~~r~v~l~k~~~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 83 (93)
T 3o46_A 4 SVKIIRLVKNREPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFK 83 (93)
T ss_dssp CCEEEEEEESSSCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEEE
T ss_pred cEEEEEEEeCCCCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 5688999999899999999863 4689999999999999999 9999999999999999999999999999988899999
Q ss_pred EEecCC
Q psy3835 1206 VQYSPD 1211 (1659)
Q Consensus 1206 v~r~~~ 1211 (1659)
|.+...
T Consensus 84 v~~~~~ 89 (93)
T 3o46_A 84 IIPGSK 89 (93)
T ss_dssp EECC--
T ss_pred EEeCCC
Confidence 986543
No 98
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=8.5e-11 Score=115.85 Aligned_cols=87 Identities=20% Similarity=0.387 Sum_probs=78.7
Q ss_pred CCCCeEEEEEecCCCCceEEEEecC-CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLD-SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
....++.|.|.+...+|||+|.+.. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++.++..+.
T Consensus 5 ~~~~~r~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 84 (106)
T 2eei_A 5 SSGQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVM 84 (106)
T ss_dssp CCSSSEEEEEECCSSSCSCCEECCSSCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEEEECCCCCCEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 3457899999999999999998763 468999999999999999999999999999999999999999999988889999
Q ss_pred EEEEecCC
Q psy3835 1204 MLVQYSPD 1211 (1659)
Q Consensus 1204 l~v~r~~~ 1211 (1659)
|+|.|...
T Consensus 85 l~v~r~~~ 92 (106)
T 2eei_A 85 FLLVDKET 92 (106)
T ss_dssp EEECCTTT
T ss_pred EEEEcCch
Confidence 99987654
No 99
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.13 E-value=2.9e-10 Score=110.22 Aligned_cols=83 Identities=27% Similarity=0.426 Sum_probs=74.9
Q ss_pred CeEEEEEec-CCCCceEEEEecC--------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHh
Q psy3835 1128 ELRRVHIDK-SVEPLGIQIQCLD--------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQ 1197 (1659)
Q Consensus 1128 ~~~~v~l~k-~~~~lG~sl~~~~--------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 1197 (1659)
.++.|.|.+ ...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.
T Consensus 5 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 5 LIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp EEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred eEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 467899999 5789999998872 2389999999999999999 99999999999999999999999999998
Q ss_pred CCCeEEEEEEecC
Q psy3835 1198 CGNSITMLVQYSP 1210 (1659)
Q Consensus 1198 ~~~~v~l~v~r~~ 1210 (1659)
++..+.|+|.|++
T Consensus 85 ~g~~v~l~v~R~g 97 (98)
T 1ihj_A 85 ADFKIELEIQTFD 97 (98)
T ss_dssp SCSEEEEEEEEC-
T ss_pred CCCeEEEEEEeCC
Confidence 8999999999875
No 100
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.13 E-value=1.6e-10 Score=110.13 Aligned_cols=82 Identities=17% Similarity=0.309 Sum_probs=73.9
Q ss_pred CeEEEEEecCCCCceEEEEecC--CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCC--CeE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD--SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCG--NSI 1202 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~--~~v 1202 (1659)
.++.|.|.+...+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+ ..|
T Consensus 2 ~~~~v~l~~~~~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v 81 (90)
T 2q9v_A 2 MEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHV 81 (90)
T ss_dssp EEEEEEEECBTTBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEE
T ss_pred CcEEEEEEECCCccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 4678999999999999999873 3579999999999999999 9999999999999999999999999998764 489
Q ss_pred EEEEEec
Q psy3835 1203 TMLVQYS 1209 (1659)
Q Consensus 1203 ~l~v~r~ 1209 (1659)
.|+|.|.
T Consensus 82 ~l~v~R~ 88 (90)
T 2q9v_A 82 NLTVRQT 88 (90)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9999875
No 101
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.13 E-value=2.8e-10 Score=110.13 Aligned_cols=85 Identities=21% Similarity=0.462 Sum_probs=77.1
Q ss_pred CCeEEEEEecCCCCceEEEEecCC--CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLDS--GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~~--~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
...+.|.+.+..++|||++.++.. .|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+.
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~ 83 (97)
T 1n7e_A 4 AIIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVT 83 (97)
T ss_dssp CCEEEEEEECTTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred ceEEEEEEEeCCCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 356788998888889999998743 699999999999999999 99999999999999999999999999988889999
Q ss_pred EEEEecCC
Q psy3835 1204 MLVQYSPD 1211 (1659)
Q Consensus 1204 l~v~r~~~ 1211 (1659)
|+|.|++.
T Consensus 84 l~v~R~~~ 91 (97)
T 1n7e_A 84 LKIKKQTD 91 (97)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99998765
No 102
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.13 E-value=2.7e-10 Score=109.12 Aligned_cols=84 Identities=30% Similarity=0.400 Sum_probs=76.2
Q ss_pred CCeEEEEEecC-CCCceEEEEecC-CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCLD-SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
.+.+.|.|.+. ..+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.++..+.
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 82 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVT 82 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred ceEEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 35788999996 589999999873 5799999999999999999 99999999999999999999999999998899999
Q ss_pred EEEEecC
Q psy3835 1204 MLVQYSP 1210 (1659)
Q Consensus 1204 l~v~r~~ 1210 (1659)
|.|.|..
T Consensus 83 l~v~R~~ 89 (92)
T 2qg1_A 83 LEVGRIS 89 (92)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 9998865
No 103
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.12 E-value=1.9e-10 Score=112.52 Aligned_cols=85 Identities=21% Similarity=0.288 Sum_probs=77.9
Q ss_pred CCeEEEEEecCCCCceEEEEec-CCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEE
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCL-DSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITML 1205 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~-~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 1205 (1659)
..++.|.|.+...+|||++.++ ...|++|..|.++|||+++||++||+|++|||.++.++++.++...++.++..+.|+
T Consensus 5 ~~~r~v~l~k~~~g~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 84 (102)
T 2d90_A 5 SSGRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLL 84 (102)
T ss_dssp SSSEEEEEECCSSSSSCEEEECSSSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEEE
T ss_pred CCCEEEEEeeCCCCccEEEEeecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 4679999999999999999986 356999999999999999999999999999999999999999999998889999999
Q ss_pred EEecCC
Q psy3835 1206 VQYSPD 1211 (1659)
Q Consensus 1206 v~r~~~ 1211 (1659)
|.|.+.
T Consensus 85 v~r~~~ 90 (102)
T 2d90_A 85 VLDKEA 90 (102)
T ss_dssp ECSTTC
T ss_pred EEECCC
Confidence 987654
No 104
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.12 E-value=1.9e-10 Score=115.91 Aligned_cols=90 Identities=34% Similarity=0.612 Sum_probs=81.2
Q ss_pred CCCCeEEEEEecCCCCceEEEEecC-CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeE
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLD-SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSI 1202 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 1202 (1659)
.+..++.|.|.+...+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.++..+
T Consensus 11 ~~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 90 (119)
T 1tp5_A 11 IPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV 90 (119)
T ss_dssp CCCSCEEEEEECTTSCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEE
T ss_pred CCCccEEEEEEECCCCccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4567899999999889999999874 3699999999999999999 9999999999999999999999999999889999
Q ss_pred EEEEEecCCccc
Q psy3835 1203 TMLVQYSPDKYH 1214 (1659)
Q Consensus 1203 ~l~v~r~~~~~~ 1214 (1659)
.|.|.|.+..+.
T Consensus 91 ~l~v~r~~~~~~ 102 (119)
T 1tp5_A 91 TIIAQYKPEEYS 102 (119)
T ss_dssp EEEEEECHHHHH
T ss_pred EEEEEECCchhc
Confidence 999999776443
No 105
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.12 E-value=1.1e-10 Score=117.46 Aligned_cols=88 Identities=24% Similarity=0.337 Sum_probs=73.6
Q ss_pred CCCCCeEEEEecCCcCccCeEEecCCC-----cceEEEEeCCCChhhhc-CCCCCCEEEEECCeeCCCcCHHHHHHHHcC
Q psy3835 1233 GSGEPRFLMIETRKCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYELAK 1306 (1659)
Q Consensus 1233 ~~~~~~~v~l~k~~~~~lGi~l~gg~~-----~gi~V~~V~~gs~A~~~-gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~ 1306 (1659)
.+..++.|.|.+....+|||++.++.+ .|++|..|.+||||+++ ||++||+|++|||+++.++++.+++..++.
T Consensus 21 ~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~ 100 (120)
T 2iwo_A 21 QSMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKN 100 (120)
T ss_dssp ----CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred CCCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 356789999999887899999998642 48999999999999996 999999999999999999999999999998
Q ss_pred CCCeEEEEEEeCcc
Q psy3835 1307 PADKVTVLAQYSVE 1320 (1659)
Q Consensus 1307 ~~~~v~L~v~r~~~ 1320 (1659)
.++.|+|+|.|+..
T Consensus 101 ~~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 101 ASGSIEMQVVAGGD 114 (120)
T ss_dssp CCSEEEEEEECCTT
T ss_pred CCCeEEEEEEECCc
Confidence 89999999998754
No 106
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.12 E-value=3.5e-10 Score=107.84 Aligned_cols=85 Identities=25% Similarity=0.392 Sum_probs=76.3
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC-cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA-VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 1312 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~-~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~ 1312 (1659)
.+.++++.|.+... +|||++.++.. .|++|..|.++|||+++||++||+|++|||.++.++++.++...+...+..+.
T Consensus 2 ~~~~r~v~l~k~~~-g~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 80 (90)
T 2he4_A 2 MLRPRLCHLRKGPQ-GYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEAR 80 (90)
T ss_dssp TTCCEEEEEECBTT-BCCEEEEECSSSSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEE
T ss_pred CCCcEEEEEEECCC-CccEEEEccCCCCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 35689999999875 89999997753 58999999999999999999999999999999999999999988888888999
Q ss_pred EEEEeCc
Q psy3835 1313 VLAQYSV 1319 (1659)
Q Consensus 1313 L~v~r~~ 1319 (1659)
|+|.|..
T Consensus 81 l~v~r~~ 87 (90)
T 2he4_A 81 LLVVGPS 87 (90)
T ss_dssp EEEECCC
T ss_pred EEEEccC
Confidence 9999864
No 107
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.12 E-value=2.4e-10 Score=116.76 Aligned_cols=86 Identities=24% Similarity=0.368 Sum_probs=78.3
Q ss_pred CCCeEEEEEecCC-CCceEEEEecCC-----CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecC-CCCHHHHHHHHHh
Q psy3835 1126 PGELRRVHIDKSV-EPLGIQIQCLDS-----GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMR-SATYQLAASVLRQ 1197 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~-~~lG~sl~~~~~-----~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~-~~~~~~~~~~l~~ 1197 (1659)
...++.|.+.+.. .+|||+|.++.. .|++|..|.++|||+++| |++||+|++|||.++. ++++.+++.+++.
T Consensus 23 ~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 102 (128)
T 2db5_A 23 GRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ 102 (128)
T ss_dssp TCEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH
T ss_pred cCceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 3578899999985 799999988732 389999999999999999 9999999999999997 9999999999999
Q ss_pred CCCeEEEEEEecCC
Q psy3835 1198 CGNSITMLVQYSPD 1211 (1659)
Q Consensus 1198 ~~~~v~l~v~r~~~ 1211 (1659)
++..|+|+|.|++.
T Consensus 103 ~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 103 TTGSLRLIVAREPV 116 (128)
T ss_dssp CCSEEEEEEEECCC
T ss_pred CCCeEEEEEEcCCC
Confidence 99999999999875
No 108
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.12 E-value=2.9e-10 Score=115.69 Aligned_cols=82 Identities=20% Similarity=0.344 Sum_probs=72.0
Q ss_pred EEEEEe-cCCCCceEEEEecC------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC---
Q psy3835 1130 RRVHID-KSVEPLGIQIQCLD------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC--- 1198 (1659)
Q Consensus 1130 ~~v~l~-k~~~~lG~sl~~~~------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--- 1198 (1659)
..|.+. +...+|||+|.++. ..|+||..|.++|||+++| |++||+|++|||.++.+++|.+++.+|+.+
T Consensus 27 ~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 106 (127)
T 1wg6_A 27 LEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSM 106 (127)
T ss_dssp EEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhcc
Confidence 344454 45789999999874 2489999999999999999 999999999999999999999999999875
Q ss_pred ----CCeEEEEEEecCC
Q psy3835 1199 ----GNSITMLVQYSPD 1211 (1659)
Q Consensus 1199 ----~~~v~l~v~r~~~ 1211 (1659)
+..|+|+|.|...
T Consensus 107 ~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 107 EGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHTCEEEEEEEECSC
T ss_pred ccCCCCEEEEEEEeCCC
Confidence 7899999999765
No 109
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.12 E-value=3.2e-10 Score=111.94 Aligned_cols=85 Identities=27% Similarity=0.338 Sum_probs=76.2
Q ss_pred CCeEEEEEecCCCCceEEEEecC--------------CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHH
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLD--------------SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAA 1192 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~--------------~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~ 1192 (1659)
+.++.|.|.+...+|||+|.++. ..+++|..|.++|||+++||++||+|++|||.++.++++.++.
T Consensus 5 ~~~r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~ 84 (107)
T 3qe1_A 5 GSPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVV 84 (107)
T ss_dssp -CCEEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCcEEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 56799999999889999998872 2345799999999999999999999999999999999999999
Q ss_pred HHHHhCCCeEEEEEEecCC
Q psy3835 1193 SVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1193 ~~l~~~~~~v~l~v~r~~~ 1211 (1659)
.+++.++..+.|+|.|...
T Consensus 85 ~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 85 DLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHCSSEEEEEEECSSC
T ss_pred HHHHcCCCEEEEEEEcCCC
Confidence 9999989999999998654
No 110
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.12 E-value=2.8e-10 Score=114.25 Aligned_cols=86 Identities=31% Similarity=0.485 Sum_probs=78.3
Q ss_pred CCCeEEEEEecC-CCCceEEEEecCC-----------CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHH
Q psy3835 1126 PGELRRVHIDKS-VEPLGIQIQCLDS-----------GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAA 1192 (1659)
Q Consensus 1126 ~~~~~~v~l~k~-~~~lG~sl~~~~~-----------~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~ 1192 (1659)
...++.|.|.+. ..+|||+|.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.+++
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 92 (117)
T 2ehr_A 13 WGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAV 92 (117)
T ss_dssp BCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 457799999998 5899999988742 599999999999999999 999999999999999999999999
Q ss_pred HHHHhCCCeEEEEEEecCC
Q psy3835 1193 SVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1193 ~~l~~~~~~v~l~v~r~~~ 1211 (1659)
.+++.++..+.|+|.|...
T Consensus 93 ~~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 93 EAIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHHHTSCSSEEEEECCBSC
T ss_pred HHHHcCCCeEEEEEEECCC
Confidence 9999989999999987665
No 111
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.11 E-value=3.7e-10 Score=109.26 Aligned_cols=84 Identities=36% Similarity=0.512 Sum_probs=76.5
Q ss_pred CeEEEEEecCCCCceEEEEec--------CCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCC
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCL--------DSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCG 1199 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~--------~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 1199 (1659)
+.+.+.+.+...+|||+|.++ ...|++|..|.++|||+++||++||+|++|||.++.++++.++...++.++
T Consensus 3 ~~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 82 (97)
T 2w4f_A 3 EELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAG 82 (97)
T ss_dssp CEEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred eEEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCC
Confidence 457788999999999999976 247999999999999999999999999999999999999999888888889
Q ss_pred CeEEEEEEecCC
Q psy3835 1200 NSITMLVQYSPD 1211 (1659)
Q Consensus 1200 ~~v~l~v~r~~~ 1211 (1659)
..+.|.|.|++.
T Consensus 83 ~~v~l~v~R~g~ 94 (97)
T 2w4f_A 83 TAVQMRVWRERE 94 (97)
T ss_dssp SEEEEEEECCSS
T ss_pred CeEEEEEEeCCc
Confidence 999999999875
No 112
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.11 E-value=3.5e-10 Score=106.58 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=71.1
Q ss_pred EEEEEecCCCCceEEEEec--CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC--CCeEEE
Q psy3835 1130 RRVHIDKSVEPLGIQIQCL--DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC--GNSITM 1204 (1659)
Q Consensus 1130 ~~v~l~k~~~~lG~sl~~~--~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~~~v~l 1204 (1659)
..|.+.+...+|||++.++ ...|++|..|.++|||+++| |++||.|++|||.++.++++.++..+++.. +..+.|
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 81 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDL 81 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEE
T ss_pred EEEEEEECCCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEE
Confidence 4688889989999999986 34579999999999999999 999999999999999999999999999876 788988
Q ss_pred EEEe
Q psy3835 1205 LVQY 1208 (1659)
Q Consensus 1205 ~v~r 1208 (1659)
.|.|
T Consensus 82 ~v~R 85 (85)
T 2i04_A 82 ELCR 85 (85)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8864
No 113
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=4.9e-10 Score=112.35 Aligned_cols=85 Identities=20% Similarity=0.316 Sum_probs=77.7
Q ss_pred CCeEEEEEecCC-CCceEEEEecCC---CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe
Q psy3835 1127 GELRRVHIDKSV-EPLGIQIQCLDS---GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNS 1201 (1659)
Q Consensus 1127 ~~~~~v~l~k~~-~~lG~sl~~~~~---~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 1201 (1659)
..++.|.|.+.. .+|||++.++.. .++||..|.++|||+++| |++||+|++|||.++.++++.++..+++.++..
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~ 93 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEK 93 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSE
T ss_pred CCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 467899999985 899999998732 459999999999999999 999999999999999999999999999988999
Q ss_pred EEEEEEecCC
Q psy3835 1202 ITMLVQYSPD 1211 (1659)
Q Consensus 1202 v~l~v~r~~~ 1211 (1659)
|+|.|.|.+.
T Consensus 94 v~l~v~r~~~ 103 (117)
T 1v62_A 94 VRLEILPVPQ 103 (117)
T ss_dssp EEEEECCBTT
T ss_pred EEEEEEECCC
Confidence 9999998776
No 114
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.11 E-value=2.9e-10 Score=108.12 Aligned_cols=82 Identities=24% Similarity=0.336 Sum_probs=72.6
Q ss_pred eEEEEEecCCCCceEEEEecC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEE
Q psy3835 1129 LRRVHIDKSVEPLGIQIQCLD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLV 1206 (1659)
Q Consensus 1129 ~~~v~l~k~~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 1206 (1659)
...|.+. .+.+|||+|.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.|.|
T Consensus 4 ~~~v~~~-~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v 82 (89)
T 2q3g_A 4 SFKVVLE-GPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGL 82 (89)
T ss_dssp EEEEEEE-SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEE
T ss_pred EEEEEEc-CCCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEE
Confidence 4566665 4589999999873 458999999999999999999999999999999999999999999998889999999
Q ss_pred EecCC
Q psy3835 1207 QYSPD 1211 (1659)
Q Consensus 1207 ~r~~~ 1211 (1659)
.|++.
T Consensus 83 ~R~~~ 87 (89)
T 2q3g_A 83 SRAIT 87 (89)
T ss_dssp EEECC
T ss_pred EeCCC
Confidence 98764
No 115
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.11 E-value=2e-10 Score=115.09 Aligned_cols=86 Identities=27% Similarity=0.431 Sum_probs=77.3
Q ss_pred CCCCeEEEEecCCcCccCeEEecCC-----CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 1307 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~-----~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~ 1307 (1659)
+..++.|.+.+....+|||++.++. ..|++|..|.+||||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 101 (118)
T 3b76_A 22 SMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT 101 (118)
T ss_dssp EEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC
T ss_pred CCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3456788999887789999999874 3589999999999999988 999999999999999999999999999999
Q ss_pred CCeEEEEEEeCc
Q psy3835 1308 ADKVTVLAQYSV 1319 (1659)
Q Consensus 1308 ~~~v~L~v~r~~ 1319 (1659)
++.|+|+|.|..
T Consensus 102 ~~~v~L~v~R~~ 113 (118)
T 3b76_A 102 SSSIVLKALEVK 113 (118)
T ss_dssp CSEEEEEEEEEE
T ss_pred CCeEEEEEEECC
Confidence 999999998853
No 116
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.11 E-value=1.4e-11 Score=152.51 Aligned_cols=153 Identities=20% Similarity=0.262 Sum_probs=53.0
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHH--hCCCeEEEEEEecCCccccccCCCCCCCccc
Q psy3835 1150 SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLR--QCGNSITMLVQYSPDKYHELEGSGSSSAENE 1227 (1659)
Q Consensus 1150 ~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~--~~~~~v~l~v~r~~~~~~~~~~~~~~~~~~~ 1227 (1659)
..|++|..|.++|||+++||++||+|++|||..+.++.+. ...+. ..+..|.|+|.|++.... +......... .
T Consensus 285 ~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~l--~~~l~~~~~g~~v~l~v~R~g~~~~-~~v~~~~~~~-~ 360 (448)
T 1ky9_A 285 QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAAL--RAQVGTMPVGSKLTLGLLRDGKQVN-VNLELQQSSQ-N 360 (448)
T ss_dssp CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHHH--HHHTTSSBTTCCCEEEEESSSCEEE-CCCC--------
T ss_pred CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHHH--HHHHHhcCCCCEEEEEEEECCEEEE-EEEEEecCCC-c
Confidence 3689999999999999999999999999999999998544 44444 468899999999876422 1110000000 0
Q ss_pred ccCCCCCCCCeEEEEecCCcCccCeEEec-CCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcC
Q psy3835 1228 SVSGRGSGEPRFLMIETRKCSNLGISLVG-GNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK 1306 (1659)
Q Consensus 1228 ~~~~~~~~~~~~v~l~k~~~~~lGi~l~g-g~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~ 1306 (1659)
.. ... .....-+|+.+.. ....|++|..|.+||||+++||++||+|++|||+++.++... ...+..
T Consensus 361 ~~----~~~-------~~~~~~~G~~l~~~~~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l--~~~l~~ 427 (448)
T 1ky9_A 361 QV----DSS-------SIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAEL--RKVLDS 427 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc----ccc-------cccccccceEeeccCCCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHH--HHHHHc
Confidence 00 000 0001124665532 123589999999999999999999999999999999876544 444555
Q ss_pred CCCeEEEEEEeCc
Q psy3835 1307 PADKVTVLAQYSV 1319 (1659)
Q Consensus 1307 ~~~~v~L~v~r~~ 1319 (1659)
..+.+.|.|.|+.
T Consensus 428 ~~~~v~l~v~R~g 440 (448)
T 1ky9_A 428 KPSVLALNIQRGD 440 (448)
T ss_dssp -------------
T ss_pred CCCeEEEEEEECC
Confidence 5568889998874
No 117
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.10 E-value=2e-10 Score=108.16 Aligned_cols=81 Identities=21% Similarity=0.274 Sum_probs=71.3
Q ss_pred eEEEEEecCCCCceEEEEecC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEE
Q psy3835 1129 LRRVHIDKSVEPLGIQIQCLD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLV 1206 (1659)
Q Consensus 1129 ~~~v~l~k~~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 1206 (1659)
++.|.+ +.+.+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++.++..+.|.|
T Consensus 2 ~~~v~l-~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v 80 (85)
T 1rgw_A 2 AYSVTL-TGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTL 80 (85)
T ss_dssp EEEEEE-CCSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEE
T ss_pred cEEEEE-eCCCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEE
Confidence 356777 45679999998873 458999999999999999999999999999999999999999999988888899999
Q ss_pred EecC
Q psy3835 1207 QYSP 1210 (1659)
Q Consensus 1207 ~r~~ 1210 (1659)
.|++
T Consensus 81 ~R~~ 84 (85)
T 1rgw_A 81 QKSK 84 (85)
T ss_dssp ESCC
T ss_pred EeCC
Confidence 8764
No 118
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.10 E-value=4.7e-10 Score=108.31 Aligned_cols=83 Identities=24% Similarity=0.395 Sum_probs=73.9
Q ss_pred CCeEEEEEecCC-CCceEEEEe-------cC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHH
Q psy3835 1127 GELRRVHIDKSV-EPLGIQIQC-------LD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLR 1196 (1659)
Q Consensus 1127 ~~~~~v~l~k~~-~~lG~sl~~-------~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~ 1196 (1659)
..++.|.|.|.+ .+|||+|.+ +. ..|++|..|.++|||+++||++||+|++|||.++.++++.++..+++
T Consensus 3 ~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 82 (96)
T 2ego_A 3 QQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIK 82 (96)
T ss_dssp CCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 357899999986 799999997 21 34899999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEEec
Q psy3835 1197 QCGNSITMLVQYS 1209 (1659)
Q Consensus 1197 ~~~~~v~l~v~r~ 1209 (1659)
..+..+.|.|.+.
T Consensus 83 ~~~~~v~l~v~~~ 95 (96)
T 2ego_A 83 ASGNVLRLETLYG 95 (96)
T ss_dssp HTTTEEEEEEECC
T ss_pred hCCCeEEEEEEEC
Confidence 8888999998754
No 119
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.10 E-value=3.2e-10 Score=108.07 Aligned_cols=83 Identities=31% Similarity=0.464 Sum_probs=75.2
Q ss_pred CCCeEEEEecCCcCccCeEEecCC--CcceEEEEeCCCChhhhc-CCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~~-gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
..++.+.+.+....+|||++.++. ..|++|..|.++|||+++ ||++||+|++|||+++.++++.+++..+...+..+
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v 82 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEV 82 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 457889999988789999999763 358999999999999997 99999999999999999999999999998888999
Q ss_pred EEEEEe
Q psy3835 1312 TVLAQY 1317 (1659)
Q Consensus 1312 ~L~v~r 1317 (1659)
.|+|.|
T Consensus 83 ~l~v~r 88 (90)
T 1qav_A 83 VLEVKY 88 (90)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999976
No 120
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.10 E-value=2.2e-10 Score=113.09 Aligned_cols=85 Identities=25% Similarity=0.384 Sum_probs=76.1
Q ss_pred CCeEEEEEecC-CCCceEEEEecC----CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC--
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCLD----SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC-- 1198 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~~----~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-- 1198 (1659)
.+++.|.|.+. ..+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++.+
T Consensus 4 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 83 (108)
T 3cbz_A 4 MNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVH 83 (108)
T ss_dssp CCEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHT
T ss_pred ceEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 36789999985 589999999872 5799999999999999999 999999999999999999999999999876
Q ss_pred -CCeEEEEEEecCC
Q psy3835 1199 -GNSITMLVQYSPD 1211 (1659)
Q Consensus 1199 -~~~v~l~v~r~~~ 1211 (1659)
+..|+|+|.|...
T Consensus 84 ~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 84 KPGPIVLTVAKSGG 97 (108)
T ss_dssp SSSCEEEEEECCCC
T ss_pred CCCeEEEEEEeCCC
Confidence 4579999998654
No 121
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=1.8e-10 Score=112.89 Aligned_cols=86 Identities=20% Similarity=0.266 Sum_probs=77.7
Q ss_pred CCCeEEEEEecCCCCceEEEEecC--CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC--CC
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLD--SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC--GN 1200 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~~ 1200 (1659)
....+.|.|.+...+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.. +.
T Consensus 7 ~~~~~~v~l~~~~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~ 86 (103)
T 1uep_A 7 GYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNG 86 (103)
T ss_dssp SEEEECCEEESSSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHT
T ss_pred CceEEEEEEEeCCCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 346788899998899999999863 5689999999999999999 999999999999999999999999999886 78
Q ss_pred eEEEEEEecCC
Q psy3835 1201 SITMLVQYSPD 1211 (1659)
Q Consensus 1201 ~v~l~v~r~~~ 1211 (1659)
.|+|+|.|+..
T Consensus 87 ~v~l~v~R~~~ 97 (103)
T 1uep_A 87 QVNLTVRRKVL 97 (103)
T ss_dssp EEEEEEEEECC
T ss_pred cEEEEEEeCCC
Confidence 99999998764
No 122
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.09 E-value=8.5e-11 Score=110.24 Aligned_cols=81 Identities=25% Similarity=0.398 Sum_probs=74.1
Q ss_pred CeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQ 1207 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~ 1207 (1659)
.++.|.|.+...+|||++.++ .|++|..|.++|||+++||++||.|++|||.++.++++.++..+++..+..++|+|.
T Consensus 2 ~~r~v~l~~~~~g~G~~~~~~--~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~ 79 (83)
T 2kv8_A 2 RVRSVEVARGRAGYGFTLSGQ--APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIA 79 (83)
T ss_dssp CEEEEEECCCSSCCSCBCCCS--SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEEE
T ss_pred CcEEEEEEeCCCcccEEEEcC--CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEE
Confidence 478999999999999998764 479999999999999999999999999999999999999999999888888999998
Q ss_pred ecC
Q psy3835 1208 YSP 1210 (1659)
Q Consensus 1208 r~~ 1210 (1659)
|++
T Consensus 80 R~~ 82 (83)
T 2kv8_A 80 EGV 82 (83)
T ss_dssp CCC
T ss_pred cCC
Confidence 764
No 123
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.09 E-value=3.7e-10 Score=113.22 Aligned_cols=88 Identities=30% Similarity=0.471 Sum_probs=79.5
Q ss_pred CCCeEEEEEecCCCCceEEEEecCC---CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLDS---GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNS 1201 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~~---~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 1201 (1659)
+++.+.|.+.+...+|||+|.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..
T Consensus 15 ~~~~~~v~l~~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 94 (116)
T 2dm8_A 15 PGQEMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQK 94 (116)
T ss_dssp TTSCEEEEEECCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSE
T ss_pred CCCEEEEEEEECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 3567889999999999999998743 599999999999999999 999999999999999999999999999988899
Q ss_pred EEEEEEecCCcc
Q psy3835 1202 ITMLVQYSPDKY 1213 (1659)
Q Consensus 1202 v~l~v~r~~~~~ 1213 (1659)
|.|.|.|++..+
T Consensus 95 v~l~v~R~~~~~ 106 (116)
T 2dm8_A 95 VRLVVYRDEAHY 106 (116)
T ss_dssp EEEEEECCSSCC
T ss_pred EEEEEEeCCccc
Confidence 999999987643
No 124
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.09 E-value=3.8e-10 Score=108.96 Aligned_cols=85 Identities=20% Similarity=0.304 Sum_probs=74.7
Q ss_pred CCCCeEEEEecCCcCccCeEEec-------CC--CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHH
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVG-------GN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYEL 1304 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~g-------g~--~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l 1304 (1659)
++.++.|.|.+....+|||++.+ +. ..|++|..|.++|||+++||++||+|++|||+++.++++.++...+
T Consensus 2 ~~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 2 SQQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CCCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45678999999987899999986 32 2489999999999999999999999999999999999999998888
Q ss_pred cCCCCeEEEEEEeC
Q psy3835 1305 AKPADKVTVLAQYS 1318 (1659)
Q Consensus 1305 ~~~~~~v~L~v~r~ 1318 (1659)
...++.+.|+|.++
T Consensus 82 ~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 82 KASGNVLRLETLYG 95 (96)
T ss_dssp HHTTTEEEEEEECC
T ss_pred HhCCCeEEEEEEEC
Confidence 87788999999874
No 125
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.08 E-value=3.4e-10 Score=107.15 Aligned_cols=82 Identities=29% Similarity=0.485 Sum_probs=73.7
Q ss_pred CCeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhh-cCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 1312 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~-~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~ 1312 (1659)
.++.+.|.+....+|||++.++.. .|++|..|.+||||++ +||++||+|++|||+++.++++.+++..+...++.+.
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 81 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 81 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred CEEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 467899999888899999997633 4799999999999999 7999999999999999999999999999988888999
Q ss_pred EEEEe
Q psy3835 1313 VLAQY 1317 (1659)
Q Consensus 1313 L~v~r 1317 (1659)
|+|.+
T Consensus 82 l~v~~ 86 (87)
T 4e34_A 82 FEVVY 86 (87)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98864
No 126
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.08 E-value=5.2e-10 Score=109.78 Aligned_cols=82 Identities=24% Similarity=0.284 Sum_probs=73.8
Q ss_pred CCeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhC--CCeEEE
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQC--GNSITM 1204 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~~~v~l 1204 (1659)
++.+.|.|.|+..+|||+|.++ ..|.+|..|.+ +|..+||++||+|++|||.++.+++|.+++.+|+.+ +..|+|
T Consensus 11 ~~~~~V~L~Kg~~G~GFsI~~~-~~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L 87 (113)
T 3soe_A 11 GLLVTIPLIKGPKGFGFAIADS-PTGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPL 87 (113)
T ss_dssp CEEEEEEEECBTTBSSEEEEEE-TTEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEE
T ss_pred CCEEEEEEEECCCcccEEEeCC-CCCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEE
Confidence 5778999999999999999754 45788999988 578889999999999999999999999999999985 679999
Q ss_pred EEEecCC
Q psy3835 1205 LVQYSPD 1211 (1659)
Q Consensus 1205 ~v~r~~~ 1211 (1659)
+|.|++.
T Consensus 88 ~V~R~g~ 94 (113)
T 3soe_A 88 LILRGGP 94 (113)
T ss_dssp EEEESSC
T ss_pred EEEECCc
Confidence 9999875
No 127
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.08 E-value=3.2e-10 Score=111.86 Aligned_cols=84 Identities=18% Similarity=0.215 Sum_probs=74.8
Q ss_pred CCCeEEEEEecCC-CCceEEEEecC--CCcEEEEEeCCCChhhhcC--CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCC
Q psy3835 1126 PGELRRVHIDKSV-EPLGIQIQCLD--SGGVFVSTVSEHSLASQVG--LQVGDQLLEVCGINMRSATYQLAASVLRQCGN 1200 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~-~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~G--L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 1200 (1659)
....+.|.+.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..+.
T Consensus 15 ~~~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~ 94 (107)
T 3nfk_A 15 HDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCE 94 (107)
T ss_dssp -CCCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGG
T ss_pred CCCEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 3567899999986 89999999873 3589999999999999999 99999999999999999999999999998765
Q ss_pred ----eEEEEEEec
Q psy3835 1201 ----SITMLVQYS 1209 (1659)
Q Consensus 1201 ----~v~l~v~r~ 1209 (1659)
.|.|+|.|+
T Consensus 95 ~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 95 RHSGELMLLVRPN 107 (107)
T ss_dssp SBTTBEEEEEECC
T ss_pred cCCcEEEEEEEcC
Confidence 899998763
No 128
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.08 E-value=2.4e-10 Score=114.06 Aligned_cols=85 Identities=36% Similarity=0.470 Sum_probs=77.5
Q ss_pred CeEEEEEecCCCCceEEEEe---c-----CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQC---L-----DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC 1198 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~---~-----~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 1198 (1659)
+.+.|.+.+...+|||++.+ + ...|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.+
T Consensus 4 ~~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 83 (113)
T 2g5m_B 4 ELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT 83 (113)
T ss_dssp EEEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 46788888888999999998 2 24699999999999999999 999999999999999999999999999999
Q ss_pred CCeEEEEEEecCCc
Q psy3835 1199 GNSITMLVQYSPDK 1212 (1659)
Q Consensus 1199 ~~~v~l~v~r~~~~ 1212 (1659)
+..+.|.|.|++..
T Consensus 84 g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 84 KGRVRFMIGRERPG 97 (113)
T ss_dssp CSSCEEEEEECCCC
T ss_pred CCeEEEEEEeCCCC
Confidence 99999999998763
No 129
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.08 E-value=4e-10 Score=114.97 Aligned_cols=87 Identities=28% Similarity=0.431 Sum_probs=78.0
Q ss_pred CCCCeEEEEEecC--CCCceEEEEecC-----------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHH
Q psy3835 1125 HPGELRRVHIDKS--VEPLGIQIQCLD-----------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQL 1190 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~--~~~lG~sl~~~~-----------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~ 1190 (1659)
.+..++.|.+.+. ..+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+
T Consensus 26 ~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 105 (128)
T 1nf3_C 26 LPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ 105 (128)
T ss_dssp SCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH
T ss_pred CCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 3457799999998 479999998762 2489999999999999999 9999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEEEecCC
Q psy3835 1191 AASVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1191 ~~~~l~~~~~~v~l~v~r~~~ 1211 (1659)
+..+++..+..|+|+|.|.+.
T Consensus 106 ~~~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 106 VTDMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHHHHHTTTSEEEEEECCCC
T ss_pred HHHHHHcCCCeEEEEEEECCc
Confidence 999999888899999998764
No 130
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.08 E-value=4.6e-10 Score=114.98 Aligned_cols=86 Identities=21% Similarity=0.382 Sum_probs=77.7
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCCc--------------ceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHH
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNAV--------------GIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEE 1299 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~~--------------gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~ 1299 (1659)
...++.|.|.+....+|||+|.++... |++|..|.+||||+++||++||+|++|||+++.++++.+
T Consensus 25 ~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~ 104 (132)
T 3l4f_D 25 IIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQ 104 (132)
T ss_dssp CCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHH
T ss_pred CCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH
Confidence 356789999998878999999987542 799999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCeEEEEEEeCc
Q psy3835 1300 AAYELAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1300 ~~~~l~~~~~~v~L~v~r~~ 1319 (1659)
++..++..+..+.|+|.+..
T Consensus 105 ~~~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 105 VVNMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp HHHHHHHTTTEEEEEEECCC
T ss_pred HHHHHHcCCCEEEEEEEECC
Confidence 99999888999999998764
No 131
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=3.3e-10 Score=108.96 Aligned_cols=83 Identities=22% Similarity=0.274 Sum_probs=73.9
Q ss_pred CeEEEEEecCCCCceEEEEecC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITML 1205 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 1205 (1659)
.++.|.+ +.+.+|||++.++. ..+++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.|+
T Consensus 8 ~~~~v~l-~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~ 86 (94)
T 2eeg_A 8 MPHSVTL-RGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLS 86 (94)
T ss_dssp CCEEEEE-CCSSCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEEE
T ss_pred ceEEEEE-eCCCccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 4577888 45579999999874 46899999999999999999999999999999999999999999998888899999
Q ss_pred EEecCC
Q psy3835 1206 VQYSPD 1211 (1659)
Q Consensus 1206 v~r~~~ 1211 (1659)
|.|++.
T Consensus 87 v~R~g~ 92 (94)
T 2eeg_A 87 VSSGPS 92 (94)
T ss_dssp EECCSS
T ss_pred EEeCCC
Confidence 998764
No 132
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.08 E-value=5.5e-10 Score=110.38 Aligned_cols=87 Identities=25% Similarity=0.382 Sum_probs=76.8
Q ss_pred CCCCeEEEEEe--cCCCCceEEEEec-------CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHH
Q psy3835 1125 HPGELRRVHID--KSVEPLGIQIQCL-------DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASV 1194 (1659)
Q Consensus 1125 ~~~~~~~v~l~--k~~~~lG~sl~~~-------~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~ 1194 (1659)
...+.+.|.+. +...+|||++.++ ...|++|..|.++|||+++| |++||+|++|||.++.++++.++..+
T Consensus 9 ~~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 88 (108)
T 2jre_A 9 SGFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEV 88 (108)
T ss_dssp SSCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHH
T ss_pred cCcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34567888884 5578999999886 24599999999999999999 99999999999999999999999999
Q ss_pred HHhCCCeEEEEEEecCC
Q psy3835 1195 LRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1195 l~~~~~~v~l~v~r~~~ 1211 (1659)
++.++..|.|+|.|++.
T Consensus 89 l~~~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 89 LRNAGNPVRLLLIRRLP 105 (108)
T ss_dssp HHHHCSEEEEEEEECCC
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 98888999999998765
No 133
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.08 E-value=4.3e-10 Score=119.95 Aligned_cols=83 Identities=37% Similarity=0.474 Sum_probs=76.3
Q ss_pred CCeEEEEEecCCCCceEEEEe---c-----CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHh
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQC---L-----DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQ 1197 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~---~-----~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 1197 (1659)
.+.+.|.|.++..+|||+|.+ + ...|+||..|.+||||+++| |++||+|++|||.++.++++.+++.+++.
T Consensus 79 ~~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~ 158 (170)
T 3egg_C 79 LELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 158 (170)
T ss_dssp SEEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH
T ss_pred ceEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 456889999998999999998 2 24689999999999999999 99999999999999999999999999999
Q ss_pred CCCeEEEEEEec
Q psy3835 1198 CGNSITMLVQYS 1209 (1659)
Q Consensus 1198 ~~~~v~l~v~r~ 1209 (1659)
++..|+|+|.|+
T Consensus 159 ~g~~v~L~V~R~ 170 (170)
T 3egg_C 159 TKGRVRFMIGRE 170 (170)
T ss_dssp CCSEEEEEEEEC
T ss_pred CCCEEEEEEEeC
Confidence 999999999874
No 134
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.07 E-value=4.5e-10 Score=106.59 Aligned_cols=82 Identities=33% Similarity=0.390 Sum_probs=71.6
Q ss_pred CeEEEEEecCCCCceEEEEec-CCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh--CCCeEEE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCL-DSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ--CGNSITM 1204 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~-~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l 1204 (1659)
+.+.|.|.+...+|||++.+. ...|++|..| ++|||+ +||++||.|++|||.++.++++.++...++. .+..+.|
T Consensus 3 ~~~~v~l~k~~~g~G~~~~~~~~~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 80 (88)
T 3bpu_A 3 ELITVHIVKGPMGFGFTIADSPGGGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTL 80 (88)
T ss_dssp EEEEEEEECBTTBSSCEEEECTTSSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEE
T ss_pred cEEEEEEEcCCCceeEEEEecCCCCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEE
Confidence 578999999999999999977 3468999997 999999 9999999999999999999999999999885 5789999
Q ss_pred EEEecCC
Q psy3835 1205 LVQYSPD 1211 (1659)
Q Consensus 1205 ~v~r~~~ 1211 (1659)
+|.|++.
T Consensus 81 ~v~R~g~ 87 (88)
T 3bpu_A 81 LVQRQTR 87 (88)
T ss_dssp EEEEECC
T ss_pred EEEeCCc
Confidence 9998753
No 135
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.07 E-value=5.9e-10 Score=105.48 Aligned_cols=76 Identities=20% Similarity=0.276 Sum_probs=69.0
Q ss_pred cCCCCceEEEEecCC--CcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEecCC
Q psy3835 1136 KSVEPLGIQIQCLDS--GGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1136 k~~~~lG~sl~~~~~--~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 1211 (1659)
+.+.+|||++.++.+ .|++|..|.++|||+++||++||+|++|||.++.++++.++..+++..+..+.|.|.|++.
T Consensus 9 ~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 86 (87)
T 2pa1_A 9 AGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRITS 86 (87)
T ss_dssp CSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEECCC
T ss_pred CCCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEecCC
Confidence 346899999998743 5999999999999999999999999999999999999999999999877899999998763
No 136
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.07 E-value=7.8e-10 Score=112.96 Aligned_cols=87 Identities=14% Similarity=0.171 Sum_probs=78.7
Q ss_pred CCCCeEEEEEecCCCCceEEEEec--CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC--C
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCL--DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC--G 1199 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~--~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~ 1199 (1659)
..++...|.|.+...+|||++.++ ...|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.. +
T Consensus 15 ~~g~~~~v~l~~~~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g 94 (129)
T 2kpk_A 15 LKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIG 94 (129)
T ss_dssp SCSEEEEEEEEECSSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTT
T ss_pred cCCcEEEEEEEECCCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 446778899999999999999986 34589999999999999999 999999999999999999999999999887 7
Q ss_pred CeEEEEEEecCC
Q psy3835 1200 NSITMLVQYSPD 1211 (1659)
Q Consensus 1200 ~~v~l~v~r~~~ 1211 (1659)
..|+|.|.|+..
T Consensus 95 ~~v~l~v~R~~~ 106 (129)
T 2kpk_A 95 ASVDLELCRGYP 106 (129)
T ss_dssp EEEEEEEEECSC
T ss_pred CeEEEEEEeCCC
Confidence 789999999764
No 137
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.07 E-value=9.7e-10 Score=109.22 Aligned_cols=88 Identities=26% Similarity=0.476 Sum_probs=78.6
Q ss_pred CCCeEEEEEecCCCCceEEEEecCC-----CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC-
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLDS-----GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC- 1198 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~~-----~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~- 1198 (1659)
....+.+.+.+...+|||++.++.. .|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..
T Consensus 9 ~~~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 88 (111)
T 2koj_A 9 VGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTK 88 (111)
T ss_dssp SCEEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred cCcEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4567888899989999999998742 689999999999999999 999999999999999999999999999875
Q ss_pred -CCeEEEEEEecCCcc
Q psy3835 1199 -GNSITMLVQYSPDKY 1213 (1659)
Q Consensus 1199 -~~~v~l~v~r~~~~~ 1213 (1659)
+..|.|.|.|++..+
T Consensus 89 ~g~~v~l~v~R~~~~~ 104 (111)
T 2koj_A 89 MEGTVSLLVFRQEEAF 104 (111)
T ss_dssp CSSEEEEEEEECCCCC
T ss_pred CCCeEEEEEEeCCCCc
Confidence 789999999987643
No 138
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.07 E-value=7.7e-10 Score=106.77 Aligned_cols=85 Identities=16% Similarity=0.240 Sum_probs=75.6
Q ss_pred CCCCeEEEEEecC-CCCceEEEEecCCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeE
Q psy3835 1125 HPGELRRVHIDKS-VEPLGIQIQCLDSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSI 1202 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~-~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 1202 (1659)
.....+.+.+.+. ..+|||++.+ ...|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.++..|
T Consensus 5 ~~~~~~~v~l~~~~~~glG~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v 83 (96)
T 2qkv_A 5 NSLEKFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKV 83 (96)
T ss_dssp CCCCCEEEEEECBTTBCCCEEEEE-CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred HHCceEEEEEEeCCCCCccEEEEe-CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcE
Confidence 3456678889764 6899999987 45789999999999999999 9999999999999999999999999999988899
Q ss_pred EEEEEecC
Q psy3835 1203 TMLVQYSP 1210 (1659)
Q Consensus 1203 ~l~v~r~~ 1210 (1659)
.|+|.|..
T Consensus 84 ~l~v~R~~ 91 (96)
T 2qkv_A 84 SMEVTRPK 91 (96)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99999854
No 139
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.07 E-value=3.4e-10 Score=107.31 Aligned_cols=73 Identities=26% Similarity=0.429 Sum_probs=67.0
Q ss_pred cCCCCcCeEecCceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcCCCeEEEEEEccCC
Q psy3835 820 NNSYDHGLTLESGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDSPDVLTITTLKPTS 893 (1659)
Q Consensus 820 ~~~~~lG~~~~~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~~~~v~l~v~r~~~ 893 (1659)
+...+|||.+.+|+||.+|.|||||+++|+|++||+|++|||.++.+ ++++++..+|+.+++.++|++.+..+
T Consensus 10 ~~~~~~G~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~-~~~~~~~~~i~~~~~~v~L~v~~~~~ 82 (88)
T 3e17_A 10 RANEEYGLRLGSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTEN-MSLTDARKLIEKSRGKLQLVVLRDLE 82 (88)
T ss_dssp TTBCCCCEEEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT-CCHHHHHHHHHHTTTEEEEEECCC--
T ss_pred CCCCCCCEEEeCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHcCCCeEEEEEeCCCc
Confidence 44568999999999999999999999999999999999999999999 99999999999999999999988764
No 140
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.07 E-value=9e-10 Score=109.72 Aligned_cols=84 Identities=25% Similarity=0.433 Sum_probs=76.8
Q ss_pred CCeEEEEEecCCC-CceEEEEecCCCcEEEEEeCCCChhhhcCC-CCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEE
Q psy3835 1127 GELRRVHIDKSVE-PLGIQIQCLDSGGVFVSTVSEHSLASQVGL-QVGDQLLEVCGINMRSATYQLAASVLRQCGNSITM 1204 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~-~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL-~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 1204 (1659)
..++.|.+.+... +|||++... ..|++|..|.++|||+++|| ++||+|++|||.++.++++.++..+++..+..++|
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~~~-~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l 102 (113)
T 1va8_A 24 ETVKIVRIEKARDIPLGATVRNE-MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTF 102 (113)
T ss_dssp EECEEEEEEECTTCCCCEEEEEC-SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEE
T ss_pred CceEEEEEEeCCCCceeEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 4678899999976 999999876 57899999999999999997 99999999999999999999999999988889999
Q ss_pred EEEecCC
Q psy3835 1205 LVQYSPD 1211 (1659)
Q Consensus 1205 ~v~r~~~ 1211 (1659)
+|.|.+.
T Consensus 103 ~v~r~~~ 109 (113)
T 1va8_A 103 VLIPSSG 109 (113)
T ss_dssp EEECCCC
T ss_pred EEEECCc
Confidence 9998765
No 141
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.07 E-value=3.2e-10 Score=113.88 Aligned_cols=85 Identities=25% Similarity=0.380 Sum_probs=78.3
Q ss_pred CCeEEEEEecC-CCCceEEEEecC-----CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecC-CCCHHHHHHHHHhC
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCLD-----SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMR-SATYQLAASVLRQC 1198 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~~-----~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~-~~~~~~~~~~l~~~ 1198 (1659)
..++.|.|.+. ..+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++. ++++.++..+++.+
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 98 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA 98 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 46899999998 589999999873 4689999999999999999 9999999999999998 99999999999999
Q ss_pred CCeEEEEEEecCC
Q psy3835 1199 GNSITMLVQYSPD 1211 (1659)
Q Consensus 1199 ~~~v~l~v~r~~~ 1211 (1659)
+..|.|+|.|++.
T Consensus 99 ~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 99 KDTVQLVIARGSL 111 (117)
T ss_dssp CSEEEEEEESSCC
T ss_pred CCEEEEEEEeCCc
Confidence 9999999999876
No 142
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.06 E-value=7.5e-10 Score=105.74 Aligned_cols=82 Identities=21% Similarity=0.304 Sum_probs=72.8
Q ss_pred eEEEEEecCCCCceEEEEecCC--CcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEE
Q psy3835 1129 LRRVHIDKSVEPLGIQIQCLDS--GGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLV 1206 (1659)
Q Consensus 1129 ~~~v~l~k~~~~lG~sl~~~~~--~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 1206 (1659)
++.|.+. .+.+|||++.++.+ .|++|..|.++|||+++||++||+|++|||.++.++++.++...++.++..+.|.|
T Consensus 4 ~~~v~~~-~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v 82 (91)
T 2pkt_A 4 TQQIDLQ-GPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTV 82 (91)
T ss_dssp EEEEEEE-SSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred cEEEEEC-CCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 3556565 45789999998743 68999999999999999999999999999999999999999999998899999999
Q ss_pred EecCC
Q psy3835 1207 QYSPD 1211 (1659)
Q Consensus 1207 ~r~~~ 1211 (1659)
.|++.
T Consensus 83 ~R~g~ 87 (91)
T 2pkt_A 83 ARSEH 87 (91)
T ss_dssp EEECC
T ss_pred EECCc
Confidence 99875
No 143
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.06 E-value=3.9e-10 Score=110.37 Aligned_cols=87 Identities=29% Similarity=0.465 Sum_probs=76.2
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhh-cCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK 1310 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~-~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~ 1310 (1659)
+..++.|.+.+....+|||++.++.+ .|++|..|.+||||++ +||++||+|++|||.++.++++.+++..++..++.
T Consensus 7 ~~~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 86 (103)
T 2dc2_A 7 VGPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 86 (103)
T ss_dssp --CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSE
T ss_pred CCCcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 44567889998888899999998643 4899999999999999 69999999999999999999999999999888899
Q ss_pred EEEEEEeCcc
Q psy3835 1311 VTVLAQYSVE 1320 (1659)
Q Consensus 1311 v~L~v~r~~~ 1320 (1659)
++|+|.+...
T Consensus 87 v~l~v~~~~~ 96 (103)
T 2dc2_A 87 IEFEVVYVAL 96 (103)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEEecCC
Confidence 9999998643
No 144
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.06 E-value=3.3e-10 Score=111.63 Aligned_cols=83 Identities=24% Similarity=0.400 Sum_probs=76.0
Q ss_pred eEEEEEecCC-CCceEEEEecC-CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEE
Q psy3835 1129 LRRVHIDKSV-EPLGIQIQCLD-SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLV 1206 (1659)
Q Consensus 1129 ~~~v~l~k~~-~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 1206 (1659)
++.|.|.+.. .+|||.+..+. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++.++..|+|+|
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v 81 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLV 81 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTTCCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEE
Confidence 5889999985 89999999873 468999999999999999999999999999999999999999999998899999999
Q ss_pred EecCC
Q psy3835 1207 QYSPD 1211 (1659)
Q Consensus 1207 ~r~~~ 1211 (1659)
.|.+.
T Consensus 82 ~r~~~ 86 (106)
T 3ngh_A 82 LDGDS 86 (106)
T ss_dssp ECHHH
T ss_pred EECCe
Confidence 98664
No 145
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.06 E-value=2.3e-10 Score=113.00 Aligned_cols=85 Identities=24% Similarity=0.345 Sum_probs=74.7
Q ss_pred CCCeEEEEecCCcCccCeEEecCC----CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC--
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP-- 1307 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~----~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~-- 1307 (1659)
..++.|.|.+....+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..|+..
T Consensus 4 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 83 (108)
T 3cbz_A 4 MNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVH 83 (108)
T ss_dssp CCEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHT
T ss_pred ceEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 356788898877779999999863 3689999999999999988 999999999999999999999999988765
Q ss_pred -CCeEEEEEEeCc
Q psy3835 1308 -ADKVTVLAQYSV 1319 (1659)
Q Consensus 1308 -~~~v~L~v~r~~ 1319 (1659)
++.|+|+|.|..
T Consensus 84 ~~~~v~l~v~R~~ 96 (108)
T 3cbz_A 84 KPGPIVLTVAKSG 96 (108)
T ss_dssp SSSCEEEEEECCC
T ss_pred CCCeEEEEEEeCC
Confidence 568999999864
No 146
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.06 E-value=8.9e-10 Score=105.23 Aligned_cols=82 Identities=28% Similarity=0.470 Sum_probs=72.5
Q ss_pred CCeEEEEecCCcCccCeEEecCCC-cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNA-VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 1314 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~-~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~ 1314 (1659)
.++.+.|.+... +|||++.++.. .|++|..|.++|||+++||++||+|++|||+++.++++.+++..+...++.+.+.
T Consensus 3 ~~r~v~l~r~~~-g~G~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~ 81 (91)
T 1g9o_A 3 LPRLCCLEKGPN-GYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLL 81 (91)
T ss_dssp CCEEEEEECBTT-BCCEEEEECTTCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred ccEEEEEEeCCC-cccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEE
Confidence 578899999876 89999988753 6999999999999999999999999999999999999999999998877777766
Q ss_pred EEeC
Q psy3835 1315 AQYS 1318 (1659)
Q Consensus 1315 v~r~ 1318 (1659)
+.+.
T Consensus 82 ~~~r 85 (91)
T 1g9o_A 82 VVDP 85 (91)
T ss_dssp EECC
T ss_pred EEcC
Confidence 6553
No 147
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.05 E-value=8.2e-10 Score=105.47 Aligned_cols=83 Identities=20% Similarity=0.318 Sum_probs=72.6
Q ss_pred CCeEEEEecCCc-CccCeEEecCC-CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1236 EPRFLMIETRKC-SNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1236 ~~~~v~l~k~~~-~~lGi~l~gg~-~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
..+.+.+.+... .+|||++.++. ..|++|..|.+||||+++||++||+|++|||+++.++++.+++..+...+..+.|
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l 85 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDL 85 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEE
T ss_pred ceEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEE
Confidence 345678887654 58999998864 3699999999999999999999999999999999999999888888888889999
Q ss_pred EEEeC
Q psy3835 1314 LAQYS 1318 (1659)
Q Consensus 1314 ~v~r~ 1318 (1659)
+|.|+
T Consensus 86 ~v~R~ 90 (91)
T 1m5z_A 86 VISRN 90 (91)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99886
No 148
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.05 E-value=5.6e-10 Score=109.84 Aligned_cols=78 Identities=23% Similarity=0.370 Sum_probs=68.8
Q ss_pred EecCCCCceEEEEecC-------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEE
Q psy3835 1134 IDKSVEPLGIQIQCLD-------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITML 1205 (1659)
Q Consensus 1134 l~k~~~~lG~sl~~~~-------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 1205 (1659)
+.....+|||+|.+|. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.++..|+|+
T Consensus 8 ~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~ 87 (106)
T 4amh_A 8 VPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLK 87 (106)
T ss_dssp ----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEE
T ss_pred CCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEE
Confidence 3345789999999983 2389999999999999999 9999999999999999999999999999999999999
Q ss_pred EEecCC
Q psy3835 1206 VQYSPD 1211 (1659)
Q Consensus 1206 v~r~~~ 1211 (1659)
|.|++.
T Consensus 88 v~R~~~ 93 (106)
T 4amh_A 88 VAKPGS 93 (106)
T ss_dssp EECCSS
T ss_pred EEeCCC
Confidence 998765
No 149
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=5.3e-10 Score=109.48 Aligned_cols=86 Identities=23% Similarity=0.352 Sum_probs=76.3
Q ss_pred CCCeEEEEEecCCCCceEEEEecC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
.++.+.|.+. .+.+|||+|.++. ..+++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.
T Consensus 3 ~g~~~~v~l~-~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 81 (103)
T 1wf7_A 3 SGSSGSVSLV-GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLN 81 (103)
T ss_dssp CCCCEEEEEE-SSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEE
T ss_pred CCCEEEEEEe-CCCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 3567888887 5689999999874 347999999999999999999999999999999999999999999988889999
Q ss_pred EEEEecCCc
Q psy3835 1204 MLVQYSPDK 1212 (1659)
Q Consensus 1204 l~v~r~~~~ 1212 (1659)
|.|.|++..
T Consensus 82 l~v~R~g~~ 90 (103)
T 1wf7_A 82 MTLQRASAA 90 (103)
T ss_dssp EEECCCSCC
T ss_pred EEEEeCCCc
Confidence 999987763
No 150
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.05 E-value=9.1e-10 Score=109.00 Aligned_cols=84 Identities=25% Similarity=0.389 Sum_probs=74.7
Q ss_pred CeEEEEEecC-CCCceEEEEecCC--------------CcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHH
Q psy3835 1128 ELRRVHIDKS-VEPLGIQIQCLDS--------------GGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAA 1192 (1659)
Q Consensus 1128 ~~~~v~l~k~-~~~lG~sl~~~~~--------------~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~ 1192 (1659)
+++.|.|.+. ..+|||+|.++.. .|++|..|.++|||+++||++||+|++|||.++.++++.++.
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~ 86 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVV 86 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 5688899865 6899999998743 279999999999999999999999999999999999999999
Q ss_pred HHHHhCCCeEEEEEEecCC
Q psy3835 1193 SVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1193 ~~l~~~~~~v~l~v~r~~~ 1211 (1659)
.+++..+..+.|+|.+...
T Consensus 87 ~~l~~~~~~v~l~v~~~~~ 105 (109)
T 1q3o_A 87 NMIRQGGNTLMVKVVMVTR 105 (109)
T ss_dssp HHHHHTTTEEEEEEEEEEC
T ss_pred HHHHhCCCEEEEEEEECCC
Confidence 9999888899999987543
No 151
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=4.8e-10 Score=112.55 Aligned_cols=84 Identities=23% Similarity=0.248 Sum_probs=76.0
Q ss_pred CCeEEEEEecCC-CCceEEEEecC--------CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh
Q psy3835 1127 GELRRVHIDKSV-EPLGIQIQCLD--------SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ 1197 (1659)
Q Consensus 1127 ~~~~~v~l~k~~-~~lG~sl~~~~--------~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 1197 (1659)
.+++.|.|.+.. .+|||+|.++. ..|++|..|.++|||+ +||++||+|++|||.++.++++.+++.+++.
T Consensus 13 ~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~ 91 (117)
T 2csj_A 13 WEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRK 91 (117)
T ss_dssp EEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhc
Confidence 467889999985 89999999873 4589999999999997 8899999999999999999999999999999
Q ss_pred CCCeEEEEEEecCC
Q psy3835 1198 CGNSITMLVQYSPD 1211 (1659)
Q Consensus 1198 ~~~~v~l~v~r~~~ 1211 (1659)
++..|.|+|.|...
T Consensus 92 ~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 92 SGKIAAIVVKRPRK 105 (117)
T ss_dssp SCSEEEEEEEEEEE
T ss_pred CCCeEEEEEEECCc
Confidence 99999999998654
No 152
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=1.9e-10 Score=114.78 Aligned_cols=91 Identities=35% Similarity=0.601 Sum_probs=82.2
Q ss_pred CCCeEEEEEecCCCCceEEEEecC-CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLD-SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
...++.|.|.+...+|||+|.++. ..|++|..|.+++||+++| |++||+|++|||.++.++++.++..+++..+..+.
T Consensus 13 ~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v~ 92 (113)
T 1um7_A 13 AREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVT 92 (113)
T ss_dssp CCSEEEEEEECCSSCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEEE
T ss_pred CCceEEEEEEECCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 457899999999999999998874 4799999999999999999 99999999999999999999999999998889999
Q ss_pred EEEEecCCccccc
Q psy3835 1204 MLVQYSPDKYHEL 1216 (1659)
Q Consensus 1204 l~v~r~~~~~~~~ 1216 (1659)
|+|.|++..+..+
T Consensus 93 l~v~r~~~~~~~~ 105 (113)
T 1um7_A 93 IVAQYRPEEYSRF 105 (113)
T ss_dssp EEEECCHHHHHHH
T ss_pred EEEEECcchhhhh
Confidence 9999987755543
No 153
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.05 E-value=9.9e-10 Score=105.81 Aligned_cols=81 Identities=26% Similarity=0.377 Sum_probs=71.7
Q ss_pred eEEEEEecCCCCceEEEEecC----------CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhC
Q psy3835 1129 LRRVHIDKSVEPLGIQIQCLD----------SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQC 1198 (1659)
Q Consensus 1129 ~~~v~l~k~~~~lG~sl~~~~----------~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 1198 (1659)
...|.+.+.. +|||+|.++. ..|++|..|.++|||++ ||++||+|++|||.++.++++.+++..++.+
T Consensus 4 ~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (95)
T 1mfg_A 4 EIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTF 81 (95)
T ss_dssp EEEEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHHC
T ss_pred EEEEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhcC
Confidence 3567777765 8999999863 35999999999999999 9999999999999999999999999999988
Q ss_pred CCeEEEEEEecCC
Q psy3835 1199 GNSITMLVQYSPD 1211 (1659)
Q Consensus 1199 ~~~v~l~v~r~~~ 1211 (1659)
+..+.|.|.|++.
T Consensus 82 ~~~v~l~v~R~~~ 94 (95)
T 1mfg_A 82 QNTVELIIVREVS 94 (95)
T ss_dssp CSEEEEEEEEECC
T ss_pred CCeEEEEEEeCCC
Confidence 9999999998753
No 154
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.04 E-value=1.2e-09 Score=106.53 Aligned_cols=86 Identities=21% Similarity=0.358 Sum_probs=74.5
Q ss_pred CCCeEEEEEecCC-CCceEEEEecCCC----cEEEEEeCCCChhhhc-CCCCCCEEEeeCCeecCCCCHHHHHHHHHh--
Q psy3835 1126 PGELRRVHIDKSV-EPLGIQIQCLDSG----GVFVSTVSEHSLASQV-GLQVGDQLLEVCGINMRSATYQLAASVLRQ-- 1197 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~-~~lG~sl~~~~~~----gv~I~~V~~gs~A~~~-GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~-- 1197 (1659)
+...+.|.+.+.. .+|||++...... +++|..|.++|||+++ ||++||+|++|||.++.+.++.++..+++.
T Consensus 7 ~~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 86 (101)
T 2yt7_A 7 GDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETK 86 (101)
T ss_dssp TCCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTT
T ss_pred CCceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4567889999864 7999999865333 7999999999999995 599999999999999999999999999987
Q ss_pred CCCeEEEEEEecCC
Q psy3835 1198 CGNSITMLVQYSPD 1211 (1659)
Q Consensus 1198 ~~~~v~l~v~r~~~ 1211 (1659)
.+..|+|+|.|.+.
T Consensus 87 ~g~~v~l~v~R~~p 100 (101)
T 2yt7_A 87 SQTSVTLSIVHCPP 100 (101)
T ss_dssp TSSEEEEEECCCCC
T ss_pred CCCeEEEEEEeCCC
Confidence 68899999987653
No 155
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.04 E-value=9.3e-10 Score=107.91 Aligned_cols=86 Identities=26% Similarity=0.437 Sum_probs=76.9
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
...++.|.|.+.....|||++.++.. .|++|..|.++|||+++||++||+|++|||+++.++++.+++..+.. +..+
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v 91 (104)
T 1wi2_A 13 QFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT-AREI 91 (104)
T ss_dssp SSCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH-SSSE
T ss_pred CCCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCEE
Confidence 45679999999887799999998644 58999999999999999999999999999999999999999888876 7899
Q ss_pred EEEEEeCcc
Q psy3835 1312 TVLAQYSVE 1320 (1659)
Q Consensus 1312 ~L~v~r~~~ 1320 (1659)
.|+|.|++.
T Consensus 92 ~l~v~r~~~ 100 (104)
T 1wi2_A 92 SMRVRFFSG 100 (104)
T ss_dssp EEEEECCCC
T ss_pred EEEEEECCC
Confidence 999998753
No 156
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=7.8e-10 Score=111.34 Aligned_cols=86 Identities=17% Similarity=0.206 Sum_probs=76.1
Q ss_pred CCCeEEEEEecCC-CCceEEEEecC--CCcEEEEEeCCCChhhhc--CCCCCCEEEeeCCeecCCCCHHHHHHHHHhCC-
Q psy3835 1126 PGELRRVHIDKSV-EPLGIQIQCLD--SGGVFVSTVSEHSLASQV--GLQVGDQLLEVCGINMRSATYQLAASVLRQCG- 1199 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~-~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~--GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~- 1199 (1659)
...++.|.+.+.. ++|||+|.++. ..|++|..|.++|||+++ ||++||+|++|||.++.++++.++..+++..+
T Consensus 13 ~~~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~ 92 (119)
T 2cs5_A 13 HDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCE 92 (119)
T ss_dssp SSCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 3567899999985 56999999874 348999999999999999 89999999999999999999999999998874
Q ss_pred ---CeEEEEEEecCC
Q psy3835 1200 ---NSITMLVQYSPD 1211 (1659)
Q Consensus 1200 ---~~v~l~v~r~~~ 1211 (1659)
..|.|+|.|+..
T Consensus 93 ~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 93 RHSGELMLLVRPNAV 107 (119)
T ss_dssp CCSSCEEEEEECCCC
T ss_pred cCCCEEEEEEEcccc
Confidence 489999998754
No 157
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.04 E-value=9.8e-10 Score=112.32 Aligned_cols=87 Identities=25% Similarity=0.386 Sum_probs=78.2
Q ss_pred CCCCeEEEEEec-CCCCceEEEEec-------CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHH
Q psy3835 1125 HPGELRRVHIDK-SVEPLGIQIQCL-------DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVL 1195 (1659)
Q Consensus 1125 ~~~~~~~v~l~k-~~~~lG~sl~~~-------~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l 1195 (1659)
...+.+.|.+.+ ...+|||++.++ ...|++|..|.++|||+++| |++||+|++|||.++.++++.++..++
T Consensus 12 ~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 91 (129)
T 2dmz_A 12 SLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVL 91 (129)
T ss_dssp CCEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHH
T ss_pred CCCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 345778899966 578999999985 24699999999999999999 999999999999999999999999999
Q ss_pred HhCCCeEEEEEEecCC
Q psy3835 1196 RQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1196 ~~~~~~v~l~v~r~~~ 1211 (1659)
+.++..|.|.|.|++.
T Consensus 92 ~~~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 92 RNAGQVVHLTLVRRKT 107 (129)
T ss_dssp HHCCSSEEEEEEEESS
T ss_pred HcCCCeEEEEEEeCCc
Confidence 9888999999999876
No 158
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.04 E-value=5.9e-10 Score=108.29 Aligned_cols=81 Identities=20% Similarity=0.269 Sum_probs=72.2
Q ss_pred EEEEecCCCCceEEEEecC----C-----CcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe
Q psy3835 1131 RVHIDKSVEPLGIQIQCLD----S-----GGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNS 1201 (1659)
Q Consensus 1131 ~v~l~k~~~~lG~sl~~~~----~-----~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 1201 (1659)
+|.+.+.+.+|||++.+.. . .|++|..|.++|||+++||++||+|++|||.++.++++.++...++.++..
T Consensus 5 ~v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 84 (99)
T 3khf_A 5 PIVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKSGNK 84 (99)
T ss_dssp CEEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred CEEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCE
Confidence 4778888999999998762 1 278999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCC
Q psy3835 1202 ITMLVQYSPD 1211 (1659)
Q Consensus 1202 v~l~v~r~~~ 1211 (1659)
+.|+|.|.+.
T Consensus 85 v~l~v~r~~~ 94 (99)
T 3khf_A 85 ISLRTTALEN 94 (99)
T ss_dssp EEEEEECSCS
T ss_pred EEEEEEECCC
Confidence 9999998765
No 159
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.04 E-value=3.5e-10 Score=108.09 Aligned_cols=84 Identities=23% Similarity=0.307 Sum_probs=73.3
Q ss_pred CCCeEEEEecCCcCccCeEEecCC-CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~-~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
+.+|++.|.+... +|||++.+.. ..|++|..|.++|||+++||++||+|++|||+++.++++.++...+...+..+.|
T Consensus 2 ~~pr~v~l~k~~~-~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l 80 (91)
T 2vsp_A 2 MKPKLCRLAKGEN-GYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTL 80 (91)
T ss_dssp CCEEEEEEECBTT-BTSCCCBCCTTCSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEE
T ss_pred CCcEEEEEEeCCC-cccEEEEeccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEE
Confidence 5679999999877 8999998753 3589999999999999999999999999999999999999999988877889999
Q ss_pred EEEeCc
Q psy3835 1314 LAQYSV 1319 (1659)
Q Consensus 1314 ~v~r~~ 1319 (1659)
+|.|+.
T Consensus 81 ~v~r~~ 86 (91)
T 2vsp_A 81 LVCGKK 86 (91)
T ss_dssp EEEC--
T ss_pred EEEeCC
Confidence 999864
No 160
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=6.5e-10 Score=111.49 Aligned_cols=87 Identities=24% Similarity=0.436 Sum_probs=75.6
Q ss_pred CCeEEEEecCC------cCccCeEEecCCC-------cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHH
Q psy3835 1236 EPRFLMIETRK------CSNLGISLVGGNA-------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAA 1301 (1659)
Q Consensus 1236 ~~~~v~l~k~~------~~~lGi~l~gg~~-------~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~ 1301 (1659)
..+.+.+.+.. ..+|||+|.++.. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++
T Consensus 12 ~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 91 (117)
T 1ujd_A 12 PHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQ 91 (117)
T ss_dssp CEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHH
T ss_pred ceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHH
Confidence 34567777766 4689999998743 389999999999999988 999999999999999999999999
Q ss_pred HHHcCCCCeEEEEEEeCcccc
Q psy3835 1302 YELAKPADKVTVLAQYSVERY 1322 (1659)
Q Consensus 1302 ~~l~~~~~~v~L~v~r~~~~~ 1322 (1659)
.++...+..+.|+|.|+...+
T Consensus 92 ~~l~~~~~~v~l~v~R~~~~~ 112 (117)
T 1ujd_A 92 SIISQQSGEAEICVRLDLNMS 112 (117)
T ss_dssp HHHSCCSSCEEEEEESSCCCC
T ss_pred HHHhcCCCEEEEEEEECCccc
Confidence 999988999999999986533
No 161
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=6.4e-10 Score=108.69 Aligned_cols=84 Identities=27% Similarity=0.317 Sum_probs=74.3
Q ss_pred CeEEEEEecCCCCceEEEEecCC---CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHh-----C
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLDS---GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQ-----C 1198 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~~---~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-----~ 1198 (1659)
..+.|.+.+...+|||+|.++.+ .+++|..|.+++||+++| |++||+|++|||.++.+++|.+++.+|+. .
T Consensus 6 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~ 85 (103)
T 1ufx_A 6 SGTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKD 85 (103)
T ss_dssp SSEEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSS
T ss_pred ceEEEEEEcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCC
Confidence 35788998889999999998843 235999999999999999 99999999999999999999999999988 4
Q ss_pred CCeEEEEEEecCC
Q psy3835 1199 GNSITMLVQYSPD 1211 (1659)
Q Consensus 1199 ~~~v~l~v~r~~~ 1211 (1659)
+..+.|.|.|...
T Consensus 86 ~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 86 RDYIDFLVTEFNS 98 (103)
T ss_dssp CSEEEEEECCCCC
T ss_pred CCeEEEEEEEccc
Confidence 6788999987654
No 162
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=8.3e-10 Score=110.69 Aligned_cols=87 Identities=28% Similarity=0.322 Sum_probs=78.3
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC---cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCC
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA---VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPAD 1309 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~---~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~ 1309 (1659)
...++.|.|.+....+|||++.++.. .++||..|.+||||+++| |++||+|++|||+++.++++.+++.+|+..+.
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~ 92 (117)
T 1v62_A 13 ASGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISE 92 (117)
T ss_dssp SSSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSS
T ss_pred CCCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45678999999887899999987633 359999999999999988 99999999999999999999999999988899
Q ss_pred eEEEEEEeCcc
Q psy3835 1310 KVTVLAQYSVE 1320 (1659)
Q Consensus 1310 ~v~L~v~r~~~ 1320 (1659)
.+.|+|.|+..
T Consensus 93 ~v~l~v~r~~~ 103 (117)
T 1v62_A 93 KVRLEILPVPQ 103 (117)
T ss_dssp EEEEEECCBTT
T ss_pred eEEEEEEECCC
Confidence 99999999755
No 163
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=2.1e-10 Score=113.98 Aligned_cols=86 Identities=36% Similarity=0.449 Sum_probs=77.0
Q ss_pred CCCeEEEEEecCC-CCceEEEEecC-----------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHH
Q psy3835 1126 PGELRRVHIDKSV-EPLGIQIQCLD-----------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAA 1192 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~-~~lG~sl~~~~-----------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~ 1192 (1659)
+...+.|.|.+.. .+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++
T Consensus 7 ~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 86 (111)
T 1uju_A 7 GPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAV 86 (111)
T ss_dssp SCSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHH
T ss_pred CCccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3456788999985 89999999874 2489999999999999999 999999999999999999999999
Q ss_pred HHHHhCCCeEEEEEEecCC
Q psy3835 1193 SVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1193 ~~l~~~~~~v~l~v~r~~~ 1211 (1659)
.+++.++..+.|+|.|+..
T Consensus 87 ~~l~~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 87 QLLRSVGDTLTVLVCDGFE 105 (111)
T ss_dssp HHHSSCSSEEEECCCCCCC
T ss_pred HHHHcCCCeEEEEEEECCC
Confidence 9999888999999987654
No 164
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.03 E-value=7.4e-10 Score=106.00 Aligned_cols=84 Identities=30% Similarity=0.445 Sum_probs=74.3
Q ss_pred CCeEEEEecCCcCccCeEEecCC-CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~-~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
....+.|.+.+..+|||++.++. ..|++|..|.+||||+++| |++||+|++|||+++.++++.++...+...++.+.|
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 83 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTL 83 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEE
T ss_pred eEEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 34668888877779999998764 3699999999999999999 999999999999999999999988888878889999
Q ss_pred EEEeCc
Q psy3835 1314 LAQYSV 1319 (1659)
Q Consensus 1314 ~v~r~~ 1319 (1659)
+|.|..
T Consensus 84 ~v~R~~ 89 (92)
T 2qg1_A 84 EVGRIS 89 (92)
T ss_dssp EEECCC
T ss_pred EEEccc
Confidence 998863
No 165
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.03 E-value=3.4e-10 Score=111.88 Aligned_cols=96 Identities=21% Similarity=0.333 Sum_probs=73.4
Q ss_pred ccCCCcceeEEEEEeccCCCCCCccCeeecCCCCCCCCCCCccEEEEeeccCCcc--CCcccccceeeeeccc-cchhhh
Q psy3835 53 DTDLQEWDTEVLDMNLTNLSPNEALGLELVGGRDDPFYPNDSSIYVSNIVKGSVT--DGKLKKKEEVARIKKQ-CEDMNQ 129 (1659)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~p~~~~d~~i~v~~v~~g~~a--~g~l~~~d~i~~vn~~-~~~~~~ 129 (1659)
..|..+|++..+ ++.|..+..||||.+.||.+.++.+++.+++|+.|.+||+| .|+|++||+|++||++ +.++++
T Consensus 5 ~~~~~~~~~~~v--~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 82 (108)
T 2jre_A 5 YSDASGFSLYSV--ELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQ 82 (108)
T ss_dssp CCSSSSCEEEEE--EEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCH
T ss_pred cccccCcEEEEE--EEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 345555555555 55444566799999999999999999999999999999966 4669999999999999 888766
Q ss_pred h-HHHHHHhhcchhHHHHhhcccceeeeehhh
Q psy3835 130 E-KNTALRERNGLKQQCTAAIRQWDIALRERN 160 (1659)
Q Consensus 130 ~-~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~ 160 (1659)
. ++.+ +......+.|+|.|..
T Consensus 83 ~~~~~~----------l~~~g~~v~l~v~R~~ 104 (108)
T 2jre_A 83 SDVVEV----------LRNAGNPVRLLLIRRL 104 (108)
T ss_dssp HHHHHH----------HHHHCSEEEEEEEECC
T ss_pred HHHHHH----------HHcCCCeEEEEEEeCC
Confidence 5 3333 3334567788887654
No 166
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.03 E-value=1e-09 Score=106.42 Aligned_cols=84 Identities=33% Similarity=0.474 Sum_probs=74.1
Q ss_pred CeEEEEecCCcCccCeEEecCCC---cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEE
Q psy3835 1237 PRFLMIETRKCSNLGISLVGGNA---VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 1312 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~gg~~---~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~ 1312 (1659)
.+.+.+.+... +|||++.++.+ .|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+..+.
T Consensus 5 ~~~v~l~~~~~-~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 83 (98)
T 2opg_A 5 ETTIEISKGRT-GLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVR 83 (98)
T ss_dssp EEEEEEECBTT-BTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred EEEEEEEECCC-cccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 46678887654 89999998764 589999999999999999 99999999999999999999999888888889999
Q ss_pred EEEEeCccc
Q psy3835 1313 VLAQYSVER 1321 (1659)
Q Consensus 1313 L~v~r~~~~ 1321 (1659)
|+|.|+...
T Consensus 84 l~v~R~~~~ 92 (98)
T 2opg_A 84 LTLYRDEAP 92 (98)
T ss_dssp EEEEECSSC
T ss_pred EEEEcCCCC
Confidence 999987543
No 167
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.03 E-value=1.2e-09 Score=107.64 Aligned_cols=84 Identities=21% Similarity=0.265 Sum_probs=76.1
Q ss_pred CCeEEEEEecCC-CCceEEEEecCC--------CcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh
Q psy3835 1127 GELRRVHIDKSV-EPLGIQIQCLDS--------GGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ 1197 (1659)
Q Consensus 1127 ~~~~~v~l~k~~-~~lG~sl~~~~~--------~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 1197 (1659)
.+++.|.|.+.. .+|||+|.++.+ .|++|..|.++|||+ +||++||+|++|||.++.++++..+...+..
T Consensus 6 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (107)
T 2h2b_A 6 WEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRK 84 (107)
T ss_dssp EEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred ceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhC
Confidence 467899999984 899999998732 499999999999999 9999999999999999999999999888888
Q ss_pred CCCeEEEEEEecCC
Q psy3835 1198 CGNSITMLVQYSPD 1211 (1659)
Q Consensus 1198 ~~~~v~l~v~r~~~ 1211 (1659)
++..+.|.|.|++.
T Consensus 85 ~g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 85 SGKNAKITIRRKKG 98 (107)
T ss_dssp CCSEEEEEEEEESC
T ss_pred CCCEEEEEEEECCC
Confidence 89999999998765
No 168
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.02 E-value=9.6e-10 Score=106.13 Aligned_cols=84 Identities=21% Similarity=0.330 Sum_probs=74.8
Q ss_pred CCCeEEEEecCCcCccCeEEecCC----CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN----AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK 1310 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~----~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~ 1310 (1659)
+.+|.+.|.+... +|||++.+.. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...+...+..
T Consensus 2 ~~~r~v~l~k~~~-~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 80 (96)
T 2v90_A 2 MKPRCLHLEKGPQ-GFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSC 80 (96)
T ss_dssp CCCEEEEEECBTT-BSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCCEEEEEEeCCC-cccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 4678999999776 9999998732 2489999999999999999999999999999999999999999888887899
Q ss_pred EEEEEEeCc
Q psy3835 1311 VTVLAQYSV 1319 (1659)
Q Consensus 1311 v~L~v~r~~ 1319 (1659)
+.|+|.|+.
T Consensus 81 v~l~v~r~~ 89 (96)
T 2v90_A 81 VSLTVVDPE 89 (96)
T ss_dssp EEEEEECCC
T ss_pred EEEEEECCC
Confidence 999999874
No 169
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.02 E-value=1.4e-09 Score=104.92 Aligned_cols=84 Identities=32% Similarity=0.473 Sum_probs=74.1
Q ss_pred CCCeEEEEecCCcCccCeEEecCCC-----cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCC
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA 1308 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~-----~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~ 1308 (1659)
..++.+.|.+.. .+|||++.++.. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+
T Consensus 4 g~~~~v~l~k~~-~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 4 GDIFEVELAKND-NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp TCEEEEEEECSS-SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CCEEEEEEEeCC-CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 345778888865 599999998643 589999999999999999 9999999999999999999999998888888
Q ss_pred CeEEEEEEeCc
Q psy3835 1309 DKVTVLAQYSV 1319 (1659)
Q Consensus 1309 ~~v~L~v~r~~ 1319 (1659)
..+.|+|.|+.
T Consensus 83 ~~v~l~v~R~~ 93 (96)
T 1d5g_A 83 QVVHLLLEKGQ 93 (96)
T ss_dssp SEEEEEEECCS
T ss_pred CeEEEEEEcCC
Confidence 99999998864
No 170
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.02 E-value=1.1e-09 Score=108.02 Aligned_cols=83 Identities=19% Similarity=0.294 Sum_probs=74.3
Q ss_pred CCeEEEEecCCcCccCeEEecCCC--------cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCC
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNA--------VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKP 1307 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~--------~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~ 1307 (1659)
.++.|.|.+.+..+|||++.++.+ .|++|..|.++|||+ +||++||+|++|||+++.++++..++..+...
T Consensus 7 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (107)
T 2h2b_A 7 EQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKS 85 (107)
T ss_dssp EEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred eeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCC
Confidence 457789999887799999997643 499999999999999 99999999999999999999999988888788
Q ss_pred CCeEEEEEEeCc
Q psy3835 1308 ADKVTVLAQYSV 1319 (1659)
Q Consensus 1308 ~~~v~L~v~r~~ 1319 (1659)
+..+.|+|.|+.
T Consensus 86 g~~v~l~v~R~~ 97 (107)
T 2h2b_A 86 GKNAKITIRRKK 97 (107)
T ss_dssp CSEEEEEEEEES
T ss_pred CCEEEEEEEECC
Confidence 899999999864
No 171
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=9.8e-10 Score=110.07 Aligned_cols=84 Identities=27% Similarity=0.354 Sum_probs=74.3
Q ss_pred CCeEEEEecCCcCccCeEEecCC-------CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 1307 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~-------~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~ 1307 (1659)
..+.+.+.+.. .+|||++.++. ..|++|..|.+||||+++| |++||+|++|||+++.++++.+++..++..
T Consensus 24 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 102 (117)
T 2byg_A 24 TVVEIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT 102 (117)
T ss_dssp EEEEEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 44667888776 69999999863 3589999999999999998 999999999999999999999999999888
Q ss_pred CCeEEEEEEeCcc
Q psy3835 1308 ADKVTVLAQYSVE 1320 (1659)
Q Consensus 1308 ~~~v~L~v~r~~~ 1320 (1659)
+..|.|+|.|+..
T Consensus 103 g~~v~l~v~R~~~ 115 (117)
T 2byg_A 103 SEVVYLKVGKPTT 115 (117)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEeCCc
Confidence 8999999998743
No 172
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.02 E-value=5.5e-10 Score=113.99 Aligned_cols=87 Identities=25% Similarity=0.356 Sum_probs=76.9
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC-----cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCC-CcCHHHHHHHHcC
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLR-AATAEEAAYELAK 1306 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~-----~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~-~~t~~~~~~~l~~ 1306 (1659)
+..++.|.+.+....+|||++.++.. .|++|..|.++|||+++| |++||+|++|||+++. ++++.+++.+|..
T Consensus 23 ~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 102 (128)
T 2db5_A 23 GRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ 102 (128)
T ss_dssp TCEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH
T ss_pred cCceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 34567788888877799999987643 389999999999999999 9999999999999997 9999999999988
Q ss_pred CCCeEEEEEEeCcc
Q psy3835 1307 PADKVTVLAQYSVE 1320 (1659)
Q Consensus 1307 ~~~~v~L~v~r~~~ 1320 (1659)
.+..|.|+|.|++.
T Consensus 103 ~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 103 TTGSLRLIVAREPV 116 (128)
T ss_dssp CCSEEEEEEEECCC
T ss_pred CCCeEEEEEEcCCC
Confidence 88999999999854
No 173
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=4.7e-10 Score=112.37 Aligned_cols=85 Identities=32% Similarity=0.461 Sum_probs=75.5
Q ss_pred CCCCeEEEEecCCcCccCeEEecCC-----CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 1307 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~-----~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~ 1307 (1659)
++.++.|.|.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...
T Consensus 23 ~~~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 101 (117)
T 2fne_A 23 MPQCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT 101 (117)
T ss_dssp CCEEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4567889999977 58999999863 3489999999999999988 999999999999999999999999998878
Q ss_pred CCeEEEEEEeCc
Q psy3835 1308 ADKVTVLAQYSV 1319 (1659)
Q Consensus 1308 ~~~v~L~v~r~~ 1319 (1659)
++.|.|+|.|+.
T Consensus 102 ~~~v~l~v~R~g 113 (117)
T 2fne_A 102 KGTVTLMVLSSD 113 (117)
T ss_dssp CSSEEEEEEECS
T ss_pred CCeEEEEEEeCC
Confidence 888999999874
No 174
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.02 E-value=1.4e-09 Score=110.57 Aligned_cols=85 Identities=18% Similarity=0.248 Sum_probs=76.5
Q ss_pred CCeEEEEEecC-CCCceEEEEecC--CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeE
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCLD--SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSI 1202 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 1202 (1659)
..++.|.+.+. ..+|||++.++. ..|++|..|.+||||+++| |++||+|++|||.++.++++.++..+++.++..|
T Consensus 18 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v 97 (125)
T 3hpk_A 18 TVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEV 97 (125)
T ss_dssp EEEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEE
T ss_pred CCCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 35688999997 578999999884 4689999999999999999 9999999999999999999999999999998899
Q ss_pred EEEEEecCC
Q psy3835 1203 TMLVQYSPD 1211 (1659)
Q Consensus 1203 ~l~v~r~~~ 1211 (1659)
+|+|.|...
T Consensus 98 ~l~v~r~~~ 106 (125)
T 3hpk_A 98 TIHYNKLQA 106 (125)
T ss_dssp EEEEEEECS
T ss_pred EEEEEECCC
Confidence 999988443
No 175
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.02 E-value=9.1e-10 Score=108.16 Aligned_cols=82 Identities=16% Similarity=0.240 Sum_probs=73.6
Q ss_pred eEEEEEecC-CCCceEEEEecCCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEE
Q psy3835 1129 LRRVHIDKS-VEPLGIQIQCLDSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLV 1206 (1659)
Q Consensus 1129 ~~~v~l~k~-~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 1206 (1659)
...|.|.+. ..+|||++.+ ...|++|..|.+||||+++| |++||+|++|||.++.++++.++..+++.++..|.|.|
T Consensus 3 ~~~v~L~k~~~~glG~~i~~-~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v 81 (106)
T 2la8_A 3 KFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEV 81 (106)
T ss_dssp EEEEEECCBSSSTTCCEEEE-CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEE
T ss_pred EEEEEEEeCCCCccCEEEEe-CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEE
Confidence 467888754 6899999987 45789999999999999999 99999999999999999999999999999888999999
Q ss_pred EecCC
Q psy3835 1207 QYSPD 1211 (1659)
Q Consensus 1207 ~r~~~ 1211 (1659)
.|...
T Consensus 82 ~R~~~ 86 (106)
T 2la8_A 82 TRPKP 86 (106)
T ss_dssp EECCS
T ss_pred EeCCC
Confidence 98654
No 176
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.02 E-value=1e-09 Score=107.92 Aligned_cols=83 Identities=28% Similarity=0.373 Sum_probs=73.7
Q ss_pred CeEEEEecCCcCccCeEEecCCC-------cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCC
Q psy3835 1237 PRFLMIETRKCSNLGISLVGGNA-------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA 1308 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~gg~~-------~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~ 1308 (1659)
.+.|.|.+... +|||++.++.+ .|++|..|.+||||+++| |++||+|++|||+++.++++.+++..+...+
T Consensus 4 ~~~v~l~k~~~-glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (105)
T 2awx_A 4 IMEIKLIKGPK-GLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTS 82 (105)
T ss_dssp EEEEEEECBTT-BSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCC
T ss_pred EEEEEEEECCC-CCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45678888774 99999998643 489999999999999998 9999999999999999999999999888888
Q ss_pred CeEEEEEEeCcc
Q psy3835 1309 DKVTVLAQYSVE 1320 (1659)
Q Consensus 1309 ~~v~L~v~r~~~ 1320 (1659)
..+.|+|.|+..
T Consensus 83 ~~v~l~v~R~~~ 94 (105)
T 2awx_A 83 DFVYLKVAKPTS 94 (105)
T ss_dssp SEEEEEEECCCC
T ss_pred CeEEEEEEcCCC
Confidence 999999998753
No 177
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.02 E-value=1.3e-09 Score=134.84 Aligned_cols=130 Identities=19% Similarity=0.280 Sum_probs=99.0
Q ss_pred cccccC----CCCCCCCCCEEEEECCEeCCCCChHHHHHHHHhcCCeEEEEEEeCCCCCcceEEEEEecc--C-------
Q psy3835 755 LSALLN----NPPSYKVNDCIVRVNNLDCSNVSKRMVLETVRSSGTSALMVIRRRRVGARSLVTTQLQLN--N------- 821 (1659)
Q Consensus 755 V~~v~p----~~g~l~~GD~Il~VNg~~~~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~~~~~~~~i~~~--~------- 821 (1659)
|..|.| ..++|++||+|++|||.++.++.+....-.....|..+.|+|.|++.. ..+++.+. .
T Consensus 267 V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~----~~~~v~l~~~~~~~~~~~ 342 (436)
T 4a8c_A 267 VSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKP----LEVEVTLDTSTSSSASAE 342 (436)
T ss_pred EEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEE----EEEEEEECCCCccccccc
Confidence 445554 678899999999999999999865443333334688999999998532 22333321 1
Q ss_pred CCCcCeEe-----------cCceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcCCCeEEEEEEc
Q psy3835 822 SYDHGLTL-----------ESGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDSPDVLTITTLK 890 (1659)
Q Consensus 822 ~~~lG~~~-----------~~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~~~~v~l~v~r 890 (1659)
...+|+.. ..|++|..|.+||||++.| |++||+|++|||.++.+ ++++..+|+..++.+.|.|.|
T Consensus 343 ~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~---~~~~~~~l~~~~~~v~l~v~R 418 (436)
T 4a8c_A 343 MITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNS---IAEMRKVLAAKPAIIALQIVR 418 (436)
T ss_pred ccccCceeeecccccccCCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCC---HHHHHHHHHhCCCeEEEEEEE
Confidence 11234322 1489999999999999887 99999999999999998 899999999988899999998
Q ss_pred cC
Q psy3835 891 PT 892 (1659)
Q Consensus 891 ~~ 892 (1659)
..
T Consensus 419 ~g 420 (436)
T 4a8c_A 419 GN 420 (436)
T ss_pred CC
Confidence 75
No 178
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.02 E-value=1.2e-09 Score=105.32 Aligned_cols=83 Identities=28% Similarity=0.437 Sum_probs=72.7
Q ss_pred eEEEEecC-CcCccCeEEecCC-CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEE
Q psy3835 1238 RFLMIETR-KCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 1314 (1659)
Q Consensus 1238 ~~v~l~k~-~~~~lGi~l~gg~-~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~ 1314 (1659)
+.|.|.+. ++.+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+..+.|+
T Consensus 5 ~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~ 84 (95)
T 2vwr_A 5 LQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVNLT 84 (95)
T ss_dssp EEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEE
T ss_pred EEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 45778875 5568999998764 3589999999999999998 9999999999999999999999998888888999999
Q ss_pred EEeCcc
Q psy3835 1315 AQYSVE 1320 (1659)
Q Consensus 1315 v~r~~~ 1320 (1659)
|.|+..
T Consensus 85 v~R~~~ 90 (95)
T 2vwr_A 85 IARPGK 90 (95)
T ss_dssp EEEESC
T ss_pred EEcCCc
Confidence 998643
No 179
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.02 E-value=7.5e-10 Score=109.01 Aligned_cols=85 Identities=25% Similarity=0.301 Sum_probs=76.4
Q ss_pred CCeEEEEecCCcCccCeEEecCCC-cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNA-VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 1314 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~-~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~ 1314 (1659)
+++.+.|.+..+..|||.+..+.. .|++|..|.+||||+++||++||+|++|||.++.++++.++...+...+..+.|+
T Consensus 1 g~r~v~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 80 (106)
T 3ngh_A 1 GPRESKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLL 80 (106)
T ss_dssp CCEEEEEECCTTCCCCCEEECCTTCCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEE
T ss_pred CCEEEEEEeCCCCeeCEEEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEE
Confidence 468899999988899999987643 5899999999999999999999999999999999999999888888888999999
Q ss_pred EEeCcc
Q psy3835 1315 AQYSVE 1320 (1659)
Q Consensus 1315 v~r~~~ 1320 (1659)
|.|+..
T Consensus 81 v~r~~~ 86 (106)
T 3ngh_A 81 VLDGDS 86 (106)
T ss_dssp EECHHH
T ss_pred EEECCe
Confidence 998643
No 180
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.01 E-value=1.1e-09 Score=103.49 Aligned_cols=80 Identities=21% Similarity=0.304 Sum_probs=70.1
Q ss_pred EEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEe
Q psy3835 1240 LMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQY 1317 (1659)
Q Consensus 1240 v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r 1317 (1659)
+++......+|||++.++.+ .|++|..|.++|||+++||++||+|++|||+++.++++.++...+......+.|+|.|
T Consensus 4 ~~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 83 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDR 83 (87)
T ss_dssp EEEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEE
T ss_pred EEEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEe
Confidence 44555566799999998754 5899999999999999999999999999999999999999998888777999999998
Q ss_pred Cc
Q psy3835 1318 SV 1319 (1659)
Q Consensus 1318 ~~ 1319 (1659)
+.
T Consensus 84 ~~ 85 (87)
T 2pa1_A 84 IT 85 (87)
T ss_dssp CC
T ss_pred cC
Confidence 74
No 181
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=3.7e-10 Score=110.61 Aligned_cols=86 Identities=22% Similarity=0.370 Sum_probs=77.2
Q ss_pred CCCeEEEEEecCCCCceEEEEecCC--CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeE
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLDS--GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSI 1202 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~~--~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 1202 (1659)
....+.+.+.+...+|||+|.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.++..|
T Consensus 9 ~~~~~~v~l~~~~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 88 (103)
T 1wfv_A 9 DFDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRV 88 (103)
T ss_dssp CSCCEECCEECCTTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEE
T ss_pred CceEEEEEEecCCCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3456788888888899999998743 489999999999999999 9999999999999999999999999998888999
Q ss_pred EEEEEecCC
Q psy3835 1203 TMLVQYSPD 1211 (1659)
Q Consensus 1203 ~l~v~r~~~ 1211 (1659)
.|+|.|++.
T Consensus 89 ~l~v~R~~~ 97 (103)
T 1wfv_A 89 RLLLKRGTG 97 (103)
T ss_dssp CEEEECTTC
T ss_pred EEEEEECCC
Confidence 999998765
No 182
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.01 E-value=1.2e-09 Score=108.42 Aligned_cols=88 Identities=30% Similarity=0.456 Sum_probs=77.6
Q ss_pred CCCCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1233 GSGEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1233 ~~~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
.+..++.+.+.+.. .+|||++.++...|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+..+
T Consensus 12 ~~~~~~~v~l~~~~-~~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v 90 (111)
T 2dlu_A 12 CWGHVEEVELINDG-SGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSV 90 (111)
T ss_dssp SCSEEEEEEEECCS-SCCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEE
T ss_pred CcCceEEEEEEeCC-CccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 45566888888865 489999998877899999999999999998 9999999999999999999999988887778899
Q ss_pred EEEEEeCccc
Q psy3835 1312 TVLAQYSVER 1321 (1659)
Q Consensus 1312 ~L~v~r~~~~ 1321 (1659)
.|+|.|+...
T Consensus 91 ~l~v~R~~~~ 100 (111)
T 2dlu_A 91 RMLVARDPAG 100 (111)
T ss_dssp EEEEEESCTT
T ss_pred EEEEEeCCCC
Confidence 9999987543
No 183
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=1.4e-09 Score=108.51 Aligned_cols=86 Identities=20% Similarity=0.229 Sum_probs=76.1
Q ss_pred CCCeEEEEEecC-CCCceEEEEecCC---------CcEEEEEeCCCChhhh-cCCCCCCEEEeeCCeecCCCCHHHHHHH
Q psy3835 1126 PGELRRVHIDKS-VEPLGIQIQCLDS---------GGVFVSTVSEHSLASQ-VGLQVGDQLLEVCGINMRSATYQLAASV 1194 (1659)
Q Consensus 1126 ~~~~~~v~l~k~-~~~lG~sl~~~~~---------~gv~I~~V~~gs~A~~-~GL~~GD~Il~VNg~~v~~~~~~~~~~~ 1194 (1659)
...++.|.+.+. ..+|||+|.++.. .+++|..|.++|||++ +||++||+|++|||.++.++++.++..+
T Consensus 8 ~~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~ 87 (114)
T 1uew_A 8 SLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKL 87 (114)
T ss_dssp CCCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHH
T ss_pred cccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 346788999986 6899999987621 2679999999999999 9999999999999999999999999999
Q ss_pred HHhCCCeEEEEEEecCC
Q psy3835 1195 LRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1195 l~~~~~~v~l~v~r~~~ 1211 (1659)
++..+..|.|.|.|.+.
T Consensus 88 l~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 88 IKDAGLSVTLRIIPQEE 104 (114)
T ss_dssp HHHTTTEEEEEECCCSC
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 99888999999998765
No 184
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.01 E-value=1.2e-09 Score=106.50 Aligned_cols=84 Identities=27% Similarity=0.432 Sum_probs=74.6
Q ss_pred CCCeEEEEecCCcCccCeEEecCC-------CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcC
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK 1306 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~-------~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~ 1306 (1659)
+.++.+.|.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+..
T Consensus 6 ~~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (101)
T 2jik_A 6 VTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 84 (101)
T ss_dssp EEEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT
T ss_pred CccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 346778999877 69999999863 3589999999999999988 99999999999999999999999988888
Q ss_pred CCCeEEEEEEeCc
Q psy3835 1307 PADKVTVLAQYSV 1319 (1659)
Q Consensus 1307 ~~~~v~L~v~r~~ 1319 (1659)
.+..+.|+|.|+.
T Consensus 85 ~g~~v~l~v~R~~ 97 (101)
T 2jik_A 85 AGYAVSLRVQHRL 97 (101)
T ss_dssp CCSEEEEEEEEES
T ss_pred CCCeEEEEEEeCC
Confidence 8889999998864
No 185
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.01 E-value=1.4e-09 Score=104.45 Aligned_cols=82 Identities=28% Similarity=0.400 Sum_probs=71.9
Q ss_pred CCeEEEEecCCcCccCeEEecCC-------CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 1307 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~-------~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~ 1307 (1659)
..+.|.|.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...
T Consensus 3 ~~~~v~l~k~~-~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (94)
T 2fe5_A 3 TIMEVNLLKGP-KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNT 81 (94)
T ss_dssp CEEEEEEECCT-TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTC
T ss_pred EEEEEEEEECC-CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34668888875 48999999763 2489999999999999998 999999999999999999999999888888
Q ss_pred CCeEEEEEEeC
Q psy3835 1308 ADKVTVLAQYS 1318 (1659)
Q Consensus 1308 ~~~v~L~v~r~ 1318 (1659)
++.+.|+|.|+
T Consensus 82 ~~~v~l~v~R~ 92 (94)
T 2fe5_A 82 SDMVYLKVAKP 92 (94)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEcC
Confidence 88999999875
No 186
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.01 E-value=9.3e-10 Score=105.54 Aligned_cols=84 Identities=24% Similarity=0.456 Sum_probs=74.3
Q ss_pred CCCeEEEEecCCcCccCeEEecCC--CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
..++.|.|.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...++.+
T Consensus 4 ~~~r~v~l~k~~-~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (93)
T 2dkr_A 4 GSSGVVELPKTD-EGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSV 82 (93)
T ss_dssp SCSCEEEEECCT-TCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEE
T ss_pred CCCEEEEEEeCC-CCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 467889999876 59999999763 3689999999999999975 9999999999999999999999998888777899
Q ss_pred EEEEEeCc
Q psy3835 1312 TVLAQYSV 1319 (1659)
Q Consensus 1312 ~L~v~r~~ 1319 (1659)
.|+|.|++
T Consensus 83 ~l~v~r~~ 90 (93)
T 2dkr_A 83 KLVVRSGP 90 (93)
T ss_dssp EEEECCCC
T ss_pred EEEEEeCC
Confidence 99998875
No 187
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.01 E-value=7.8e-10 Score=107.21 Aligned_cols=83 Identities=25% Similarity=0.420 Sum_probs=73.5
Q ss_pred CeEEEEecCCcCccCeEEecCC--------CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC
Q psy3835 1237 PRFLMIETRKCSNLGISLVGGN--------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 1307 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~gg~--------~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~ 1307 (1659)
++.+.|.+.+..+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.++...+...
T Consensus 6 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 85 (98)
T 1ihj_A 6 IHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEA 85 (98)
T ss_dssp EEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred EEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 4678899977779999998753 2489999999999999999 999999999999999999999988888888
Q ss_pred CCeEEEEEEeCc
Q psy3835 1308 ADKVTVLAQYSV 1319 (1659)
Q Consensus 1308 ~~~v~L~v~r~~ 1319 (1659)
+..+.|+|.|+.
T Consensus 86 g~~v~l~v~R~g 97 (98)
T 1ihj_A 86 DFKIELEIQTFD 97 (98)
T ss_dssp CSEEEEEEEEC-
T ss_pred CCeEEEEEEeCC
Confidence 899999999863
No 188
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.01 E-value=9.4e-10 Score=108.51 Aligned_cols=85 Identities=16% Similarity=0.328 Sum_probs=74.8
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcC--CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCC
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAG--LRTGDRILEYNGTDLRAATAEEAAYELAKPAD 1309 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~g--L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~ 1309 (1659)
....+.+.|.+....+|||++.++.. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+.
T Consensus 15 ~~~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~ 94 (107)
T 3nfk_A 15 HDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCE 94 (107)
T ss_dssp -CCCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGG
T ss_pred CCCEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 35678899999887799999998643 479999999999999999 99999999999999999999999998887764
Q ss_pred ----eEEEEEEeC
Q psy3835 1310 ----KVTVLAQYS 1318 (1659)
Q Consensus 1310 ----~v~L~v~r~ 1318 (1659)
.+.|+|.|+
T Consensus 95 ~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 95 RHSGELMLLVRPN 107 (107)
T ss_dssp SBTTBEEEEEECC
T ss_pred cCCcEEEEEEEcC
Confidence 899999874
No 189
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.00 E-value=1.2e-09 Score=105.10 Aligned_cols=83 Identities=24% Similarity=0.408 Sum_probs=73.2
Q ss_pred CCCeEEEEecCCcCccCeEEecCCC-cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNA-VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~-~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
..++.+.|.+.. .+|||++.++.. .|++|..|.+||||+++||++||+|++|||.++.++++.++...+...++.+.+
T Consensus 4 ~~~r~v~l~~~~-~~~G~~l~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 82 (95)
T 3r68_A 4 HQPRVVVIKKGS-NGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTL 82 (95)
T ss_dssp CCCEEEEEECBT-TBCSCEEEEC--CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred CCcEEEEEecCC-CcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 567889998865 499999987643 499999999999999999999999999999999999999999999888888988
Q ss_pred EEEeC
Q psy3835 1314 LAQYS 1318 (1659)
Q Consensus 1314 ~v~r~ 1318 (1659)
++.+.
T Consensus 83 ~~~r~ 87 (95)
T 3r68_A 83 LVLDK 87 (95)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 88775
No 190
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.00 E-value=1.3e-09 Score=107.75 Aligned_cols=84 Identities=20% Similarity=0.193 Sum_probs=74.0
Q ss_pred CCCeEEEEecCCcCccCeEEecC------CCcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGG------NAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 1307 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg------~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~ 1307 (1659)
..++.|.|.+.. .+|||++.++ ...|++|..|.++|||+++| |++||+|++|||+++.++++.+++..++..
T Consensus 14 ~~~~~v~l~k~~-~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 14 PEVKIVELVKDC-KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp SSCEEEEEEECS-SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred CceEEEEEEECC-CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 456889999986 4999999885 24689999999999999988 999999999999999999999999998874
Q ss_pred -CCeEEEEEEeCc
Q psy3835 1308 -ADKVTVLAQYSV 1319 (1659)
Q Consensus 1308 -~~~v~L~v~r~~ 1319 (1659)
++.|+|+|.|.+
T Consensus 93 ~~~~v~l~v~R~~ 105 (108)
T 2d92_A 93 PPGLVHLGICSGP 105 (108)
T ss_dssp CSEEEEEEEECCC
T ss_pred CCCeEEEEEEcCC
Confidence 578999998864
No 191
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.00 E-value=7.3e-10 Score=137.21 Aligned_cols=128 Identities=19% Similarity=0.316 Sum_probs=99.6
Q ss_pred cccccC----CCCCCCCCCEEEEECCEeCCCCChHHHHHHHH--hcCCeEEEEEEeCCCCCcceEEEEEecc--------
Q psy3835 755 LSALLN----NPPSYKVNDCIVRVNNLDCSNVSKRMVLETVR--SSGTSALMVIRRRRVGARSLVTTQLQLN-------- 820 (1659)
Q Consensus 755 V~~v~p----~~g~l~~GD~Il~VNg~~~~~~~~~~~~~~l~--~~~~~v~l~v~R~~~~~~~~~~~~i~~~-------- 820 (1659)
|..|.| +.++|++||+|++|||.++.++.+. ..++. ..|..+.|+|.|++.. ..+++++.
T Consensus 286 V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l--~~~l~~~~~g~~v~l~V~R~g~~----~~~~v~l~~~~~~~~~ 359 (451)
T 3pv2_A 286 VSQVNPNSPAELAGLKAGDIITQINDTKITQATQV--KTTISLLRVGSTVKIIVERDNKP----LTLSAVVTDIKSHEQK 359 (451)
T ss_dssp EEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHH--HHHHHTSCTTCEEEEEEEETTEE----EEEEEECBCHHHHHHH
T ss_pred EEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHH--HHHHHhcCCCCEEEEEEEECCEE----EEEEEEEccCCccccc
Confidence 566666 6688999999999999999998544 34444 4688999999998422 23333331
Q ss_pred ----CCCCcCeEec------------CceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcCCCeE
Q psy3835 821 ----NSYDHGLTLE------------SGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDSPDVL 884 (1659)
Q Consensus 821 ----~~~~lG~~~~------------~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~~~~v 884 (1659)
....+|+.+. .|++|..|.+||||++.| |++||.|++|||.++.+ +++...+|+..+..+
T Consensus 360 ~~~~~~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~---~~~~~~~l~~~~~~v 435 (451)
T 3pv2_A 360 LQSNNPFLYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAG-IRPGDIIISANKKPVTD---VKSLQTIAQEKKKEL 435 (451)
T ss_dssp HHHHSTTTTTEEEEEEEEECTTSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS---HHHHHHHTTSSCSCE
T ss_pred cccccccccccccccCChhHhcccCCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC---HHHHHHHHhcCCCeE
Confidence 0122444442 478999999999999998 99999999999999998 789999999877899
Q ss_pred EEEEEccC
Q psy3835 885 TITTLKPT 892 (1659)
Q Consensus 885 ~l~v~r~~ 892 (1659)
.|.|.|..
T Consensus 436 ~l~v~R~g 443 (451)
T 3pv2_A 436 LVQVLRGP 443 (451)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 99998874
No 192
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.00 E-value=1.2e-09 Score=107.53 Aligned_cols=85 Identities=27% Similarity=0.390 Sum_probs=72.4
Q ss_pred CeEEEEecCCcCccCeEEecC-----CCcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe
Q psy3835 1237 PRFLMIETRKCSNLGISLVGG-----NAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADK 1310 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~gg-----~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~ 1310 (1659)
...+.+ + ...+|||++.++ ...|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+..
T Consensus 12 ~~~v~l-~-~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 89 (106)
T 3axa_A 12 IITVTL-K-KQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSV 89 (106)
T ss_dssp EEEEEE-E-CSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred EEEEEE-C-CCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 344555 4 456899999874 34589999999999999998 999999999999999999999999998888999
Q ss_pred EEEEEEeCccccc
Q psy3835 1311 VTVLAQYSVERYN 1323 (1659)
Q Consensus 1311 v~L~v~r~~~~~~ 1323 (1659)
+.|+|.|+...+.
T Consensus 90 v~l~v~R~~~~~~ 102 (106)
T 3axa_A 90 VTLEVAKQGAIRR 102 (106)
T ss_dssp EEEEEECCCSSCC
T ss_pred EEEEEEeCCcccc
Confidence 9999999865443
No 193
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.00 E-value=1.3e-09 Score=106.68 Aligned_cols=83 Identities=25% Similarity=0.369 Sum_probs=74.0
Q ss_pred CCCeEEEEEecCCCCceEEEEecC----------CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHH
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLD----------SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVL 1195 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~----------~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l 1195 (1659)
..+...|.+.+.. +|||++.++. ..|++|..|.++|||++ ||++||+|++|||.++.++++.++...+
T Consensus 9 ~~~~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~ 86 (103)
T 1n7t_A 9 AKQEIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLL 86 (103)
T ss_dssp SCCCEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred ccEEEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 3456778888876 8999999862 45999999999999999 9999999999999999999999999999
Q ss_pred HhCCCeEEEEEEecC
Q psy3835 1196 RQCGNSITMLVQYSP 1210 (1659)
Q Consensus 1196 ~~~~~~v~l~v~r~~ 1210 (1659)
+.++..+.|+|.|+.
T Consensus 87 ~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 87 KTFQNTVELIIVREV 101 (103)
T ss_dssp HHCCSEEEEEEECCC
T ss_pred hcCCCeEEEEEEecC
Confidence 988999999999864
No 194
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=1.2e-09 Score=107.23 Aligned_cols=84 Identities=27% Similarity=0.495 Sum_probs=73.6
Q ss_pred CCeEEEEecCCcCccCeEEecCCC--------cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcC
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNA--------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK 1306 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~--------~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~ 1306 (1659)
....+.|.+... +|||++.++.+ .|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+..
T Consensus 7 ~~~~v~l~~~~~-glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 85 (105)
T 1wha_A 7 GRHVACLARSER-GLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTA 85 (105)
T ss_dssp EEEEEEECCCTT-CCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTS
T ss_pred eeEEEEEEeCCC-ccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 345677777654 79999998653 589999999999999999 99999999999999999999999999988
Q ss_pred CCCeEEEEEEeCcc
Q psy3835 1307 PADKVTVLAQYSVE 1320 (1659)
Q Consensus 1307 ~~~~v~L~v~r~~~ 1320 (1659)
.+..+.|+|.|+.+
T Consensus 86 ~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 86 ASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEEEEECCC
T ss_pred CCCeEEEEEEECCC
Confidence 88899999999753
No 195
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=1.3e-09 Score=104.05 Aligned_cols=82 Identities=23% Similarity=0.263 Sum_probs=72.2
Q ss_pred CCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 1315 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v 1315 (1659)
.++.+.|.+... +|||++.+. .|++|..|.+||||+++||++||+|++|||.++.++++.++...+...++.+.|+|
T Consensus 3 ~~r~v~l~~~~~-g~G~~l~~~--~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v 79 (91)
T 2f5y_A 3 RYRQITIPRGKD-GFGFTICCD--SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLV 79 (91)
T ss_dssp EEEEEEEECBTT-BTSEEEECS--SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred ceEEEEEEeCCC-CccEEEecC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 457788888765 899999864 57999999999999999999999999999999999999999888888788999999
Q ss_pred EeCcc
Q psy3835 1316 QYSVE 1320 (1659)
Q Consensus 1316 ~r~~~ 1320 (1659)
.|+..
T Consensus 80 ~R~~~ 84 (91)
T 2f5y_A 80 WRMVP 84 (91)
T ss_dssp EECC-
T ss_pred EeCCC
Confidence 98754
No 196
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.00 E-value=3e-09 Score=107.25 Aligned_cols=86 Identities=28% Similarity=0.464 Sum_probs=76.4
Q ss_pred CCCCeEEEEEecCCCCceEEEEecC-----CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLD-----SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC 1198 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~-----~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 1198 (1659)
.....+.+.+.+...+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..
T Consensus 27 ~~~~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 106 (121)
T 2kom_A 27 KIGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRST 106 (121)
T ss_dssp CSCEEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred cCCeEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 3456778888888899999999874 2689999999999999999 999999999999999999999999999874
Q ss_pred --CCeEEEEEEecC
Q psy3835 1199 --GNSITMLVQYSP 1210 (1659)
Q Consensus 1199 --~~~v~l~v~r~~ 1210 (1659)
+..|.|+|.|++
T Consensus 107 ~~g~~v~l~v~R~g 120 (121)
T 2kom_A 107 KMEGTVSLLVFRQE 120 (121)
T ss_dssp CSSCEEEEEEEECC
T ss_pred CCCCEEEEEEEeCC
Confidence 789999998865
No 197
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=1.3e-09 Score=107.59 Aligned_cols=84 Identities=27% Similarity=0.489 Sum_probs=74.6
Q ss_pred CCCeEEEEecCCcCccCeEEecCC----------CcceEEEEeCCCChhhhc-CCCCCCEEEEECCeeCCCcCHHHHHHH
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN----------AVGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYE 1303 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~----------~~gi~V~~V~~gs~A~~~-gL~~GD~Il~VNg~~v~~~t~~~~~~~ 1303 (1659)
..++.+.|.+. ..+|||++.++. ..|+||..|.++|||+++ ||++||+|++|||+++.++++.+++..
T Consensus 7 ~~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~ 85 (107)
T 1uhp_A 7 GKSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEA 85 (107)
T ss_dssp SEEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHH
T ss_pred cEEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45677889887 569999999864 358999999999999997 999999999999999999999999999
Q ss_pred HcCCCCeEEEEEEeCc
Q psy3835 1304 LAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1304 l~~~~~~v~L~v~r~~ 1319 (1659)
++..++.+.|+|.|..
T Consensus 86 ~~~~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 86 FKTAKEPIVVQVLRRT 101 (107)
T ss_dssp HHHCCSSEEEEEEECC
T ss_pred HHcCCCcEEEEEEeCC
Confidence 8888899999998863
No 198
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.99 E-value=1.5e-09 Score=105.00 Aligned_cols=84 Identities=32% Similarity=0.543 Sum_probs=75.1
Q ss_pred CeEEEEEecCCCCceEEEEec------CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCC
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCL------DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGN 1200 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~------~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 1200 (1659)
+...+.+.+...+|||++.+. ...|++|..|.++|||+++| |++||+|++|||.++.++++.++..+++.++.
T Consensus 4 ~~~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 83 (97)
T 2iwn_A 4 ETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 83 (97)
T ss_dssp EEEEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCS
T ss_pred EEEEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 356788888888999999987 24699999999999999999 99999999999999999999999999888889
Q ss_pred eEEEEEEecCC
Q psy3835 1201 SITMLVQYSPD 1211 (1659)
Q Consensus 1201 ~v~l~v~r~~~ 1211 (1659)
.+.|.|.|++.
T Consensus 84 ~v~l~v~r~g~ 94 (97)
T 2iwn_A 84 TVLLTLMRRGE 94 (97)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEEeCCC
Confidence 99999988653
No 199
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=1.8e-09 Score=105.66 Aligned_cols=84 Identities=33% Similarity=0.530 Sum_probs=73.8
Q ss_pred CeEEEEEecCC-CCceEEEEecCC-----------CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHH
Q psy3835 1128 ELRRVHIDKSV-EPLGIQIQCLDS-----------GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASV 1194 (1659)
Q Consensus 1128 ~~~~v~l~k~~-~~lG~sl~~~~~-----------~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~ 1194 (1659)
.++.|.+.+.. ..|||++.+... .|++|..|.++|||+++| |++||+|++|||.++.++++.++..+
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 46889999875 789999987622 589999999999999999 99999999999999999999999999
Q ss_pred HHhCCCeEEEEEEecCC
Q psy3835 1195 LRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1195 l~~~~~~v~l~v~r~~~ 1211 (1659)
++..+..+.|.|.|...
T Consensus 84 l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 84 IRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp HHTCCSSEEEEEECCCC
T ss_pred HHhCCCcEEEEEEECCC
Confidence 99887899999998654
No 200
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.99 E-value=1.1e-09 Score=107.59 Aligned_cols=77 Identities=31% Similarity=0.449 Sum_probs=67.7
Q ss_pred cCCcCccCeEEecCCC-------cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEE
Q psy3835 1244 TRKCSNLGISLVGGNA-------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 1315 (1659)
Q Consensus 1244 k~~~~~lGi~l~gg~~-------~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v 1315 (1659)
.....+|||++.||.+ .|++|..|.+||||+++| |++||+|++|||.++.++++.+++..++..++.+.|+|
T Consensus 9 ~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v 88 (106)
T 4amh_A 9 PRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKV 88 (106)
T ss_dssp ---CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEE
T ss_pred CCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEE
Confidence 4455699999998853 289999999999999998 99999999999999999999999999998899999999
Q ss_pred EeCcc
Q psy3835 1316 QYSVE 1320 (1659)
Q Consensus 1316 ~r~~~ 1320 (1659)
.|+..
T Consensus 89 ~R~~~ 93 (106)
T 4amh_A 89 AKPGS 93 (106)
T ss_dssp ECCSS
T ss_pred EeCCC
Confidence 99753
No 201
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.99 E-value=1.4e-09 Score=104.37 Aligned_cols=83 Identities=19% Similarity=0.284 Sum_probs=73.9
Q ss_pred CCeEEEEecCCcCccCeEEecCC-CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~-~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
..+.+.+.+.. .+|||++.++. ..+++|..|.+||||+++| |++||+|++|||+++.++++.+++..++..++.++|
T Consensus 4 ~~r~v~l~k~~-~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 82 (93)
T 3o46_A 4 SVKIIRLVKNR-EPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITF 82 (93)
T ss_dssp CCEEEEEEESS-SCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEE
T ss_pred cEEEEEEEeCC-CCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 46889999976 49999998763 3589999999999999988 999999999999999999999999999888889999
Q ss_pred EEEeCc
Q psy3835 1314 LAQYSV 1319 (1659)
Q Consensus 1314 ~v~r~~ 1319 (1659)
+|.|..
T Consensus 83 ~v~~~~ 88 (93)
T 3o46_A 83 KIIPGS 88 (93)
T ss_dssp EEECC-
T ss_pred EEEeCC
Confidence 999864
No 202
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.99 E-value=1.3e-09 Score=105.54 Aligned_cols=85 Identities=24% Similarity=0.345 Sum_probs=73.9
Q ss_pred CCeEEEEEecCCCCceEEEEecC-CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCC-eEEE
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLD-SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGN-SITM 1204 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~-~v~l 1204 (1659)
..++.+.+.+...+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++..+++.... .+.|
T Consensus 8 ~~~~~~~l~~~~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l 87 (98)
T 2jxo_A 8 LRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLL 87 (98)
T ss_dssp SCCEEEEEECTTTCCCEEEECCCSSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEE
T ss_pred CCcEEEEEEeCCCcccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEE
Confidence 35688999999999999998874 469999999999999999999999999999999999999999999987644 5668
Q ss_pred EEEecCC
Q psy3835 1205 LVQYSPD 1211 (1659)
Q Consensus 1205 ~v~r~~~ 1211 (1659)
+|.|++.
T Consensus 88 ~v~R~g~ 94 (98)
T 2jxo_A 88 VVDRETD 94 (98)
T ss_dssp ECCHHHH
T ss_pred EEECCch
Confidence 8777653
No 203
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.99 E-value=6.6e-10 Score=104.14 Aligned_cols=81 Identities=23% Similarity=0.342 Sum_probs=72.0
Q ss_pred CCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 1315 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v 1315 (1659)
.++.|.|.+.. .+|||++.++ .|++|..|.++|||+++||++||+|++|||+++.++++.++...+...++.+.|+|
T Consensus 2 ~~r~v~l~~~~-~g~G~~~~~~--~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 78 (83)
T 2kv8_A 2 RVRSVEVARGR-AGYGFTLSGQ--APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVI 78 (83)
T ss_dssp CEEEEEECCCS-SCCSCBCCCS--SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEE
T ss_pred CcEEEEEEeCC-CcccEEEEcC--CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence 46788998877 4899998764 48999999999999999999999999999999999999999988887778899999
Q ss_pred EeCc
Q psy3835 1316 QYSV 1319 (1659)
Q Consensus 1316 ~r~~ 1319 (1659)
.|++
T Consensus 79 ~R~~ 82 (83)
T 2kv8_A 79 AEGV 82 (83)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8863
No 204
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.99 E-value=8.4e-10 Score=107.36 Aligned_cols=85 Identities=25% Similarity=0.308 Sum_probs=76.3
Q ss_pred CCCCeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEE
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITM 1204 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 1204 (1659)
...+.+.+.+.+...+|||.+.+. .+++|..|.++|||+++||++||+|++|||.++.++++.++..+++..+..|.|
T Consensus 12 ~~~~~~~v~l~~~~~g~G~~~~~~--~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l 89 (100)
T 1whd_A 12 ENGEKLQITIRRGKDGFGFTICCD--SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIIL 89 (100)
T ss_dssp CCCEEEEEEEECCSSSSSCBCCCS--SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEE
T ss_pred cccceEEEEEECCCCeeeEEEeCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 445678889999889999998764 689999999999999999999999999999999999999999999988888999
Q ss_pred EEEecCC
Q psy3835 1205 LVQYSPD 1211 (1659)
Q Consensus 1205 ~v~r~~~ 1211 (1659)
+|.|+..
T Consensus 90 ~v~R~~~ 96 (100)
T 1whd_A 90 LVWRVSG 96 (100)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9998754
No 205
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.99 E-value=1.4e-09 Score=106.84 Aligned_cols=80 Identities=20% Similarity=0.252 Sum_probs=71.9
Q ss_pred eEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEE
Q psy3835 1238 RFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQ 1316 (1659)
Q Consensus 1238 ~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~ 1316 (1659)
..|.|.+....+|||++.+ ...|++|..|.+||||+++| |++||+|++|||+++.++++.++...++..++.+.|+|.
T Consensus 4 ~~v~L~k~~~~glG~~i~~-~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~ 82 (106)
T 2la8_A 4 FNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVT 82 (106)
T ss_dssp EEEEECCBSSSTTCCEEEE-CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEE
T ss_pred EEEEEEeCCCCccCEEEEe-CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEE
Confidence 4577877777899999987 45799999999999999988 999999999999999999999999888888889999999
Q ss_pred eC
Q psy3835 1317 YS 1318 (1659)
Q Consensus 1317 r~ 1318 (1659)
|.
T Consensus 83 R~ 84 (106)
T 2la8_A 83 RP 84 (106)
T ss_dssp EC
T ss_pred eC
Confidence 85
No 206
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=5.3e-10 Score=111.10 Aligned_cols=87 Identities=34% Similarity=0.400 Sum_probs=77.7
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC-----------cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHH
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA-----------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAA 1301 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~-----------~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~ 1301 (1659)
.+..+.|.|.+....+|||++.++.. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++
T Consensus 7 ~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 86 (111)
T 1uju_A 7 GPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAV 86 (111)
T ss_dssp SCSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHH
T ss_pred CCccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 35677899999887899999998752 489999999999999999 999999999999999999999999
Q ss_pred HHHcCCCCeEEEEEEeCcc
Q psy3835 1302 YELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1302 ~~l~~~~~~v~L~v~r~~~ 1320 (1659)
..+...+..+.|+|.|+..
T Consensus 87 ~~l~~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 87 QLLRSVGDTLTVLVCDGFE 105 (111)
T ss_dssp HHHSSCSSEEEECCCCCCC
T ss_pred HHHHcCCCeEEEEEEECCC
Confidence 9998888999999988743
No 207
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.98 E-value=6.8e-10 Score=111.43 Aligned_cols=86 Identities=29% Similarity=0.426 Sum_probs=76.9
Q ss_pred CCCeEEEEecCCcCccCeEEecCC-----CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCC-CcCHHHHHHHHcCC
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLR-AATAEEAAYELAKP 1307 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~-----~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~-~~t~~~~~~~l~~~ 1307 (1659)
..++.+.|.+....+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++. ++++.+++..+...
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 98 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA 98 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 457888999987779999998763 3589999999999999999 9999999999999998 99999999988888
Q ss_pred CCeEEEEEEeCcc
Q psy3835 1308 ADKVTVLAQYSVE 1320 (1659)
Q Consensus 1308 ~~~v~L~v~r~~~ 1320 (1659)
++.+.|+|.|+..
T Consensus 99 ~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 99 KDTVQLVIARGSL 111 (117)
T ss_dssp CSEEEEEEESSCC
T ss_pred CCEEEEEEEeCCc
Confidence 8999999998754
No 208
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.98 E-value=2.2e-09 Score=108.03 Aligned_cols=87 Identities=23% Similarity=0.290 Sum_probs=75.3
Q ss_pred CCCCeEEEEEecC-CCCceEEEEecC---CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCC
Q psy3835 1125 HPGELRRVHIDKS-VEPLGIQIQCLD---SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCG 1199 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~-~~~lG~sl~~~~---~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 1199 (1659)
.....+.+.+.+. ..+|||+|.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..+
T Consensus 12 ~~~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 91 (119)
T 1x6d_A 12 QLDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAR 91 (119)
T ss_dssp SCTTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTT
T ss_pred CCCCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3456788888886 689999999874 3589999999999999999 9999999999999999999999999998775
Q ss_pred C-eEEEEEEecCC
Q psy3835 1200 N-SITMLVQYSPD 1211 (1659)
Q Consensus 1200 ~-~v~l~v~r~~~ 1211 (1659)
. .+.++|.|++.
T Consensus 92 ~~~~~l~v~R~~~ 104 (119)
T 1x6d_A 92 EPRQAVIVTRKLT 104 (119)
T ss_dssp SSSEEEEEEECCC
T ss_pred CCeEEEEEEcCCC
Confidence 4 45577888765
No 209
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.98 E-value=2.1e-09 Score=103.71 Aligned_cols=83 Identities=20% Similarity=0.240 Sum_probs=73.3
Q ss_pred CCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
.....+.+.+....+|||++.+ ...|++|..|.+||||+++| |++||+|++|||+++.++++.++...+...++.+.|
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l 85 (96)
T 2qkv_A 7 LEKFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSM 85 (96)
T ss_dssp CCCEEEEEECBTTBCCCEEEEE-CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEE
T ss_pred CceEEEEEEeCCCCCccEEEEe-CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEE
Confidence 3446678877777799999887 35699999999999999999 999999999999999999999999888888899999
Q ss_pred EEEeC
Q psy3835 1314 LAQYS 1318 (1659)
Q Consensus 1314 ~v~r~ 1318 (1659)
+|.|.
T Consensus 86 ~v~R~ 90 (96)
T 2qkv_A 86 EVTRP 90 (96)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99885
No 210
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.98 E-value=2.1e-09 Score=104.72 Aligned_cols=86 Identities=21% Similarity=0.252 Sum_probs=74.1
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCCc----ceEEEEeCCCChhhh-cCCCCCCEEEEECCeeCCCcCHHHHHHHHcC--
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNAV----GIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAK-- 1306 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~~----gi~V~~V~~gs~A~~-~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~-- 1306 (1659)
....+.+.+.+..+.+|||++.+.... +++|..|.+||||++ ++|++||+|++|||+++.+.++.++..+|..
T Consensus 7 ~~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 86 (101)
T 2yt7_A 7 GDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETK 86 (101)
T ss_dssp TCCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTT
T ss_pred CCceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 356788899887777999999754322 699999999999999 7899999999999999999999999988876
Q ss_pred CCCeEEEEEEeCc
Q psy3835 1307 PADKVTVLAQYSV 1319 (1659)
Q Consensus 1307 ~~~~v~L~v~r~~ 1319 (1659)
.+..|+|+|.|.+
T Consensus 87 ~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 87 SQTSVTLSIVHCP 99 (101)
T ss_dssp TSSEEEEEECCCC
T ss_pred CCCeEEEEEEeCC
Confidence 6789999998753
No 211
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.98 E-value=1.6e-09 Score=110.83 Aligned_cols=84 Identities=23% Similarity=0.323 Sum_probs=73.1
Q ss_pred CCCeEEEEecCCcCccCeEEecCCC-----cceEEEEeCCCChhhhc-CCCCCCEEEEECCeeCCCcCHHHHHHHHcCCC
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYELAKPA 1308 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~-----~gi~V~~V~~gs~A~~~-gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~ 1308 (1659)
...+.|.|.+.. .+|||+|.++.+ .++||..|.+||||+++ ||++||+|++|||+++.++++.+++.+|+..+
T Consensus 28 ~~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 106 (130)
T 1i16_A 28 ATVCTVTLEKMS-AGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALP 106 (130)
T ss_dssp EEEEEEEEETTS-SSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSC
T ss_pred CcEEEEEEEcCC-CccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 345668888865 599999998754 48999999999999997 99999999999999999999999999998775
Q ss_pred -CeEEEEEEeCc
Q psy3835 1309 -DKVTVLAQYSV 1319 (1659)
Q Consensus 1309 -~~v~L~v~r~~ 1319 (1659)
..|.|+|.|..
T Consensus 107 ~~~v~l~v~r~~ 118 (130)
T 1i16_A 107 DGPVTIVIRRKS 118 (130)
T ss_dssp SSEEEEEEEEES
T ss_pred CceEEEEEEeCC
Confidence 46999998863
No 212
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.98 E-value=1e-09 Score=124.69 Aligned_cols=88 Identities=30% Similarity=0.370 Sum_probs=79.7
Q ss_pred CCCCeEEEEEecC-CCCceEEEEecC--CCcEEEEEeCCCChhhh-cCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCC
Q psy3835 1125 HPGELRRVHIDKS-VEPLGIQIQCLD--SGGVFVSTVSEHSLASQ-VGLQVGDQLLEVCGINMRSATYQLAASVLRQCGN 1200 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~-~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~-~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 1200 (1659)
....++.|.|.|. +.+|||+|.++. ..|+||..|.+||||++ +||++||+|++|||.++.+++|.+++.+++..+.
T Consensus 74 ~~~~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~ 153 (263)
T 1z87_A 74 LLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGK 153 (263)
T ss_dssp TSCSSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCS
T ss_pred CCCccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCC
Confidence 3457899999998 589999999983 46999999999999999 6899999999999999999999999999999999
Q ss_pred eEEEEEEecCCc
Q psy3835 1201 SITMLVQYSPDK 1212 (1659)
Q Consensus 1201 ~v~l~v~r~~~~ 1212 (1659)
.|+|+|.|.+..
T Consensus 154 ~V~L~V~R~~~~ 165 (263)
T 1z87_A 154 EVVLEVKYMKEV 165 (263)
T ss_dssp CCCEEEECCSSS
T ss_pred eEEEEEEeCccc
Confidence 999999997653
No 213
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.98 E-value=2e-09 Score=110.14 Aligned_cols=74 Identities=26% Similarity=0.365 Sum_probs=67.0
Q ss_pred CCCceEEEEecC-----CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCC--CeEEEEEEec
Q psy3835 1138 VEPLGIQIQCLD-----SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCG--NSITMLVQYS 1209 (1659)
Q Consensus 1138 ~~~lG~sl~~~~-----~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~--~~v~l~v~r~ 1209 (1659)
..+|||+|.++. ..|+||..|.++|||+++| |++||+|++|||.++.++++.++..+++.+. ..|+|+|.|+
T Consensus 47 ~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 47 GAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp CTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred CCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence 578999999862 3499999999999999999 9999999999999999999999999998864 8999999987
Q ss_pred CC
Q psy3835 1210 PD 1211 (1659)
Q Consensus 1210 ~~ 1211 (1659)
+.
T Consensus 127 g~ 128 (131)
T 1wfg_A 127 GP 128 (131)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 214
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.98 E-value=1.6e-09 Score=109.15 Aligned_cols=91 Identities=40% Similarity=0.674 Sum_probs=80.3
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC-cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA-VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~-~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
...++.+.|.+... +|||++.++.. .|++|..|.+||||+++| |++||+|++|||+++.++++.+++..+...++.+
T Consensus 12 ~~~~~~v~l~k~~~-glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 90 (119)
T 1tp5_A 12 PREPRRIVIHRGST-GLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV 90 (119)
T ss_dssp CCSCEEEEEECTTS-CCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEE
T ss_pred CCccEEEEEEECCC-CccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 45778899998765 79999998643 589999999999999999 9999999999999999999998888888889999
Q ss_pred EEEEEeCccccccc
Q psy3835 1312 TVLAQYSVERYNEV 1325 (1659)
Q Consensus 1312 ~L~v~r~~~~~~~~ 1325 (1659)
.|+|.|++..|..+
T Consensus 91 ~l~v~r~~~~~~~~ 104 (119)
T 1tp5_A 91 TIIAQYKPEEYSRF 104 (119)
T ss_dssp EEEEEECHHHHHTT
T ss_pred EEEEEECCchhccc
Confidence 99999988766554
No 215
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.97 E-value=1.9e-09 Score=106.73 Aligned_cols=83 Identities=22% Similarity=0.421 Sum_probs=73.4
Q ss_pred CCeEEEEecCCcCccCeEEecCCCc--------------ceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHH
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNAV--------------GIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAA 1301 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~~--------------gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~ 1301 (1659)
.++.+.|.+....+|||++.++... |++|..|.++|||+++||++||+|++|||+++.++++.+++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~ 86 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVV 86 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3567888877777999999987542 79999999999999999999999999999999999999999
Q ss_pred HHHcCCCCeEEEEEEeC
Q psy3835 1302 YELAKPADKVTVLAQYS 1318 (1659)
Q Consensus 1302 ~~l~~~~~~v~L~v~r~ 1318 (1659)
..+...+..+.|+|.+.
T Consensus 87 ~~l~~~~~~v~l~v~~~ 103 (109)
T 1q3o_A 87 NMIRQGGNTLMVKVVMV 103 (109)
T ss_dssp HHHHHTTTEEEEEEEEE
T ss_pred HHHHhCCCEEEEEEEEC
Confidence 88887788999999875
No 216
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.97 E-value=2.8e-09 Score=101.06 Aligned_cols=81 Identities=28% Similarity=0.484 Sum_probs=68.8
Q ss_pred CeEEEEEecCC---CCceEEEEecC---CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe
Q psy3835 1128 ELRRVHIDKSV---EPLGIQIQCLD---SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNS 1201 (1659)
Q Consensus 1128 ~~~~v~l~k~~---~~lG~sl~~~~---~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 1201 (1659)
..+.|.|.|.+ .+|||++.... ..|++|..|.++|||+++||++||+|++|||.++.++++.++..++++ ..
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~--~~ 83 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ--PS 83 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS--SE
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC--Ce
Confidence 56889999985 38999998852 358999999999999999999999999999999999999999998874 57
Q ss_pred EEEEEEecC
Q psy3835 1202 ITMLVQYSP 1210 (1659)
Q Consensus 1202 v~l~v~r~~ 1210 (1659)
++|+|..-|
T Consensus 84 l~ltV~~~p 92 (94)
T 3kzd_A 84 LGLLVRTYP 92 (94)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecC
Confidence 888887654
No 217
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.97 E-value=2.4e-09 Score=103.49 Aligned_cols=83 Identities=25% Similarity=0.363 Sum_probs=72.1
Q ss_pred CeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1237 PRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
.+.|.+.+. ..+|||++.++.. .|++|..|.+||||+++| |++||+|++|||+++.++++.++...+...+..+.|
T Consensus 6 ~~~v~l~~~-~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l 84 (97)
T 1n7e_A 6 IYTVELKRY-GGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTL 84 (97)
T ss_dssp EEEEEEECT-TSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEE
T ss_pred EEEEEEEeC-CCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 456777665 4479999988753 589999999999999999 999999999999999999999999888878889999
Q ss_pred EEEeCcc
Q psy3835 1314 LAQYSVE 1320 (1659)
Q Consensus 1314 ~v~r~~~ 1320 (1659)
+|.|+..
T Consensus 85 ~v~R~~~ 91 (97)
T 1n7e_A 85 KIKKQTD 91 (97)
T ss_dssp EEECCCC
T ss_pred EEEeCCC
Confidence 9998753
No 218
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.97 E-value=2.2e-09 Score=106.08 Aligned_cols=85 Identities=22% Similarity=0.377 Sum_probs=73.1
Q ss_pred CCCCCeEEEEecCCcCccCeEEecCCC----cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC
Q psy3835 1233 GSGEPRFLMIETRKCSNLGISLVGGNA----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 1307 (1659)
Q Consensus 1233 ~~~~~~~v~l~k~~~~~lGi~l~gg~~----~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~ 1307 (1659)
..+..+.+.+.+. .+|||++.|+.+ .++||..|.++|||+++| |++||+|++|||+++.++++.+++.+|+..
T Consensus 12 ~~~~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~ 89 (109)
T 1wi4_A 12 RDPAFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRA 89 (109)
T ss_dssp CCTTEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHS
T ss_pred CCCcEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcc
Confidence 3456788888885 589999998643 379999999999999988 999999999999999999999999998754
Q ss_pred ----CCeEEEEEEeCc
Q psy3835 1308 ----ADKVTVLAQYSV 1319 (1659)
Q Consensus 1308 ----~~~v~L~v~r~~ 1319 (1659)
+..+.|.+.|+.
T Consensus 90 ~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 90 KLRSESPWEIAFIRSG 105 (109)
T ss_dssp CCSSSSCEEEEEECCC
T ss_pred ccCCCceEEEEEEeCC
Confidence 478899998864
No 219
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=2.6e-09 Score=104.51 Aligned_cols=84 Identities=36% Similarity=0.579 Sum_probs=72.8
Q ss_pred CCeEEEEecCCcCccCeEEecCCC-----------cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHH
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNA-----------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYE 1303 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~-----------~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~ 1303 (1659)
.|+.+.+.+.....|||++.++.. .|++|..|.+||||+++| |++||+|++|||.++.++++.++...
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 568889988877789999987533 489999999999999999 99999999999999999999999999
Q ss_pred HcCCCCeEEEEEEeCc
Q psy3835 1304 LAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1304 l~~~~~~v~L~v~r~~ 1319 (1659)
+...++.+.|+|.|..
T Consensus 84 l~~~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 84 IRKAGNPVVFMVQSII 99 (103)
T ss_dssp HHTCCSSEEEEEECCC
T ss_pred HHhCCCcEEEEEEECC
Confidence 9887889999999864
No 220
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=2.9e-09 Score=103.55 Aligned_cols=84 Identities=33% Similarity=0.474 Sum_probs=74.8
Q ss_pred CCeEEEEEecCC-CCceEEEEecC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1127 GELRRVHIDKSV-EPLGIQIQCLD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1127 ~~~~~v~l~k~~-~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
..++.|.|.+.. ..|||++.+.. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++. +..+.
T Consensus 9 ~~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~ 87 (100)
T 2eeh_A 9 DIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS-SSRLH 87 (100)
T ss_dssp CEECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS-CSSEE
T ss_pred CeEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC-CCEEE
Confidence 457788998885 56999999873 468999999999999999999999999999999999998888888877 78999
Q ss_pred EEEEecCC
Q psy3835 1204 MLVQYSPD 1211 (1659)
Q Consensus 1204 l~v~r~~~ 1211 (1659)
|.|.|++.
T Consensus 88 l~v~R~g~ 95 (100)
T 2eeh_A 88 MMVRRMGS 95 (100)
T ss_dssp EEEEECSC
T ss_pred EEEEECCc
Confidence 99999876
No 221
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.96 E-value=1.7e-09 Score=102.70 Aligned_cols=78 Identities=21% Similarity=0.369 Sum_probs=67.9
Q ss_pred EEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEe
Q psy3835 1240 LMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQY 1317 (1659)
Q Consensus 1240 v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r 1317 (1659)
+.+. ...+|||++.++.. .|++|..|.++|||+++||++||+|++|||+++.++++.++...+...+..+.|+|.|
T Consensus 7 v~~~--~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R 84 (89)
T 2q3g_A 7 VVLE--GPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSR 84 (89)
T ss_dssp EEEE--SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEEEE
T ss_pred EEEc--CCCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEe
Confidence 4444 34689999988643 4899999999999999999999999999999999999999988888888899999988
Q ss_pred Cc
Q psy3835 1318 SV 1319 (1659)
Q Consensus 1318 ~~ 1319 (1659)
+.
T Consensus 85 ~~ 86 (89)
T 2q3g_A 85 AI 86 (89)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 222
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.96 E-value=2.4e-09 Score=107.49 Aligned_cols=83 Identities=27% Similarity=0.386 Sum_probs=71.6
Q ss_pred CeEEEEEecCCCCceEEEEecC---CCcEEEEEeCCCChhhhc-CCCCCCEEEeeCCeecCCCCHHHHHHHHHhC----C
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLD---SGGVFVSTVSEHSLASQV-GLQVGDQLLEVCGINMRSATYQLAASVLRQC----G 1199 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~---~~gv~I~~V~~gs~A~~~-GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~----~ 1199 (1659)
..+.+.+.+.. +|||+|.++. .++++|..|.++|||+++ ||++||+|++|||.++.+++|.+++.+++.. +
T Consensus 18 ~~~~~~~~~~~-glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g 96 (118)
T 1v6b_A 18 DVRLLRIKKEG-SLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGG 96 (118)
T ss_dssp CEEEEEEESCS-CCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTC
T ss_pred eEEEEEECCCC-ccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCC
Confidence 45666776664 8999999873 245999999999999999 7999999999999999999999999998764 7
Q ss_pred CeEEEEEEecCC
Q psy3835 1200 NSITMLVQYSPD 1211 (1659)
Q Consensus 1200 ~~v~l~v~r~~~ 1211 (1659)
..|+|+|.|.+.
T Consensus 97 ~~v~l~v~r~~~ 108 (118)
T 1v6b_A 97 DWIDLVVAVCPP 108 (118)
T ss_dssp SEEEEEEECCCS
T ss_pred CeEEEEEEeCCc
Confidence 899999998654
No 223
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=2.4e-09 Score=107.42 Aligned_cols=89 Identities=40% Similarity=0.666 Sum_probs=78.5
Q ss_pred CCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 1314 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~ 1314 (1659)
..++.|.+.+.. .+|||++.++...|++|..|.++|||+++||++||+|++|||+++.++++.+++..+...+..+.|+
T Consensus 18 ~~~~~v~l~~~~-~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~ 96 (117)
T 1uit_A 18 EEPRHVKVQKGS-EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITIL 96 (117)
T ss_dssp CCCEEEEEECSS-CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEE
T ss_pred CCCEEEEEEeCC-CCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 356778888876 5899999988777999999999999999999999999999999999999999887777788999999
Q ss_pred EEeCcccccc
Q psy3835 1315 AQYSVERYNE 1324 (1659)
Q Consensus 1315 v~r~~~~~~~ 1324 (1659)
|.|+...|..
T Consensus 97 v~r~~~~~~~ 106 (117)
T 1uit_A 97 AQYNPHVHQL 106 (117)
T ss_dssp ECCCSCCCCC
T ss_pred EEECCchhhh
Confidence 9998776654
No 224
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.96 E-value=3.8e-09 Score=106.72 Aligned_cols=87 Identities=26% Similarity=0.421 Sum_probs=77.5
Q ss_pred CCCCeEEEEEecC-CCCceEEEEec------CCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHH
Q psy3835 1125 HPGELRRVHIDKS-VEPLGIQIQCL------DSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLR 1196 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~-~~~lG~sl~~~------~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 1196 (1659)
...+++.|.|.+. ..+|||+|.++ ...+++|..|.+++||+++| |++||+|++|||.++.++++.++..+++
T Consensus 12 ~~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 91 (122)
T 1v5q_A 12 VHTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 91 (122)
T ss_dssp CCEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHH
T ss_pred ccceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3457888999998 58999999976 24579999999999999999 9999999999999999999999999998
Q ss_pred hC--CCeEEEEEEecCC
Q psy3835 1197 QC--GNSITMLVQYSPD 1211 (1659)
Q Consensus 1197 ~~--~~~v~l~v~r~~~ 1211 (1659)
.. +..|+|+|.|+..
T Consensus 92 ~~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 92 DSSITSKVTLEIEFDVA 108 (122)
T ss_dssp HHTTTTCEEEEEEEECC
T ss_pred hCCCCCeEEEEEEECCc
Confidence 75 6799999999876
No 225
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.96 E-value=2.4e-09 Score=106.41 Aligned_cols=84 Identities=23% Similarity=0.336 Sum_probs=74.3
Q ss_pred CCCeEEEEecCCcCccCeEEecCC--CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
...+.+.+.+... +|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+..+
T Consensus 23 ~~~~~v~l~~~~~-glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v 101 (112)
T 2r4h_A 23 MDFYTVELERGAK-GFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRV 101 (112)
T ss_dssp CCEEEEEEECBTT-BTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CceEEEEEEcCCC-ccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4567788888664 8999999874 3589999999999999999 9999999999999999999999998888888999
Q ss_pred EEEEEeCc
Q psy3835 1312 TVLAQYSV 1319 (1659)
Q Consensus 1312 ~L~v~r~~ 1319 (1659)
.|+|.|+.
T Consensus 102 ~l~v~R~~ 109 (112)
T 2r4h_A 102 RLFLKRGE 109 (112)
T ss_dssp EEEEECCE
T ss_pred EEEEEeCC
Confidence 99998864
No 226
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.96 E-value=3.2e-09 Score=106.00 Aligned_cols=87 Identities=21% Similarity=0.235 Sum_probs=76.4
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC---------cceEEEEeCCCChhhh-cCCCCCCEEEEECCeeCCCcCHHHHHHH
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA---------VGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYE 1303 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~---------~gi~V~~V~~gs~A~~-~gL~~GD~Il~VNg~~v~~~t~~~~~~~ 1303 (1659)
...++.|.+.+....+|||+|.++.. .+++|..|.++|||++ +||++||+|++|||+++.++++.++..+
T Consensus 8 ~~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~ 87 (114)
T 1uew_A 8 SLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKL 87 (114)
T ss_dssp CCCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHH
T ss_pred cccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45678899999877899999987521 1679999999999999 9999999999999999999999999988
Q ss_pred HcCCCCeEEEEEEeCcc
Q psy3835 1304 LAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1304 l~~~~~~v~L~v~r~~~ 1320 (1659)
|...+..+.|+|.|+..
T Consensus 88 l~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 88 IKDAGLSVTLRIIPQEE 104 (114)
T ss_dssp HHHTTTEEEEEECCCSC
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 88888999999998753
No 227
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.96 E-value=1.6e-09 Score=110.46 Aligned_cols=87 Identities=18% Similarity=0.310 Sum_probs=76.8
Q ss_pred CCCCCeEEEEecCC-cCccCeEEecCCC-----------cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHH
Q psy3835 1233 GSGEPRFLMIETRK-CSNLGISLVGGNA-----------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEE 1299 (1659)
Q Consensus 1233 ~~~~~~~v~l~k~~-~~~lGi~l~gg~~-----------~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~ 1299 (1659)
....++.|.+.+.+ ..+|||++.++.. .|++|..|.+||||+++| |++||+|++|||+++.++++.+
T Consensus 26 ~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 105 (128)
T 1nf3_C 26 LPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ 105 (128)
T ss_dssp SCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH
T ss_pred CCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 34567889999985 5799999987632 489999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCCCeEEEEEEeCc
Q psy3835 1300 AAYELAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1300 ~~~~l~~~~~~v~L~v~r~~ 1319 (1659)
++..+...++.+.|+|.|+.
T Consensus 106 ~~~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 106 VTDMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHHHTTTSEEEEEECCC
T ss_pred HHHHHHcCCCeEEEEEEECC
Confidence 99999888889999999874
No 228
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.96 E-value=2.1e-09 Score=107.29 Aligned_cols=84 Identities=25% Similarity=0.414 Sum_probs=77.1
Q ss_pred CeEEEEEecC-CCCceEEEEec-CCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEE
Q psy3835 1128 ELRRVHIDKS-VEPLGIQIQCL-DSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITML 1205 (1659)
Q Consensus 1128 ~~~~v~l~k~-~~~lG~sl~~~-~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 1205 (1659)
.++.+.+.+. ..+|||++... ...|++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..|.|.
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 92 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLL 92 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEE
T ss_pred CCEEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 6789999987 67999999876 457999999999999999999999999999999999999999999998889999999
Q ss_pred EEecCC
Q psy3835 1206 VQYSPD 1211 (1659)
Q Consensus 1206 v~r~~~ 1211 (1659)
|.|++.
T Consensus 93 v~R~~~ 98 (114)
T 2edz_A 93 VLDGDS 98 (114)
T ss_dssp EECHHH
T ss_pred EEECCc
Confidence 998765
No 229
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.96 E-value=1.9e-09 Score=106.07 Aligned_cols=82 Identities=21% Similarity=0.236 Sum_probs=72.4
Q ss_pred CeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe-EEEEE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNS-ITMLV 1206 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~-v~l~v 1206 (1659)
.++.|.|.+++.+|||++.+ ..+++|..|.++|||+++||++||+|++|||.++.++++.++..+++..+.. |.|+|
T Consensus 23 ~~r~v~l~k~~~~~G~~l~~--~~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V 100 (109)
T 2vsv_A 23 MPRSIRFTAEEGDLGFTLRG--NAPVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKV 100 (109)
T ss_dssp SCEEEEECCGGGCCCEEEES--SSSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEE
T ss_pred CCEEEEEEeCCCceeEEEeC--CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEE
Confidence 46899999988999999965 3578999999999999999999999999999999999999999999877664 99999
Q ss_pred EecCC
Q psy3835 1207 QYSPD 1211 (1659)
Q Consensus 1207 ~r~~~ 1211 (1659)
.|..+
T Consensus 101 ~~~~~ 105 (109)
T 2vsv_A 101 VSLLD 105 (109)
T ss_dssp ESCC-
T ss_pred EECCC
Confidence 86543
No 230
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=1.2e-09 Score=104.13 Aligned_cols=82 Identities=26% Similarity=0.403 Sum_probs=72.6
Q ss_pred CCeEEEEEecC-CCCceEEEEecCCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEE
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCLDSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITM 1204 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 1204 (1659)
..++.|.|.|. ..+|||++.+. ..|++|..|.++|||+++| |++||+|++|||.++ +.++.++..+++..+..++|
T Consensus 5 ~~~r~v~l~k~~~~~lG~~i~~~-~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~l 82 (91)
T 2e7k_A 5 SSGRMVGIRKTAGEHLGVTFRVE-GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVIL 82 (91)
T ss_dssp CCSCBCCBCCCTTCCCCEEEEES-SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBCE
T ss_pred CCcEEEEEEECCCCcEeEEEEec-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEEE
Confidence 45677888775 67999999984 6789999999999999987 999999999999999 89999999999988889999
Q ss_pred EEEecC
Q psy3835 1205 LVQYSP 1210 (1659)
Q Consensus 1205 ~v~r~~ 1210 (1659)
+|.|..
T Consensus 83 ~v~~~~ 88 (91)
T 2e7k_A 83 KILSGP 88 (91)
T ss_dssp EEECCS
T ss_pred EEEECC
Confidence 998653
No 231
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.96 E-value=1.5e-09 Score=109.88 Aligned_cols=89 Identities=33% Similarity=0.504 Sum_probs=75.7
Q ss_pred CCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHc--CCCCeEE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVT 1312 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~--~~~~~v~ 1312 (1659)
+..+++.+.+ ..+|||++.++...|++|..|.++|||+++||++||+|++|||+++.++++.++...+. ..+..+.
T Consensus 28 p~~~~~~~~~--~~~lG~~l~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~ 105 (124)
T 3tsv_A 28 PSMKLVKFRK--GDSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVT 105 (124)
T ss_dssp CCCEEEEEEC--SSCCCEEEEECTTSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEE
T ss_pred CCeEEEEcCC--CCceeEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEE
Confidence 3445555554 35899999987778999999999999999999999999999999999999888887766 5788999
Q ss_pred EEEEeCccccccc
Q psy3835 1313 VLAQYSVERYNEV 1325 (1659)
Q Consensus 1313 L~v~r~~~~~~~~ 1325 (1659)
|+|.|+++.|..+
T Consensus 106 l~v~R~~~~~~~~ 118 (124)
T 3tsv_A 106 ILAQKKKDVYRRI 118 (124)
T ss_dssp EEEEECHHHHHHH
T ss_pred EEEEECCchhhhh
Confidence 9999998877654
No 232
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.96 E-value=1.3e-09 Score=116.20 Aligned_cols=71 Identities=14% Similarity=0.370 Sum_probs=65.1
Q ss_pred cCCCCcCeEecC------------ceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcCCCeEEEE
Q psy3835 820 NNSYDHGLTLES------------GLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDSPDVLTIT 887 (1659)
Q Consensus 820 ~~~~~lG~~~~~------------gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~~~~v~l~ 887 (1659)
++..+|||++.+ |+||.+|.+||||+++|+|++||+|++|||.+|.+ ++|.+++.+|+.++..|+|+
T Consensus 88 k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~-~~~~~~~~~l~~~g~~v~L~ 166 (170)
T 3egg_C 88 KDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVG-VTQSFAASVLRNTKGRVRFM 166 (170)
T ss_dssp CBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT-BCHHHHHHHHHHCCSEEEEE
T ss_pred eCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC-CCHHHHHHHHHcCCCEEEEE
Confidence 455789999854 58999999999999999999999999999999999 99999999999988999999
Q ss_pred EEcc
Q psy3835 888 TLKP 891 (1659)
Q Consensus 888 v~r~ 891 (1659)
|.|.
T Consensus 167 V~R~ 170 (170)
T 3egg_C 167 IGRE 170 (170)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9873
No 233
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=2.8e-10 Score=115.83 Aligned_cols=86 Identities=20% Similarity=0.392 Sum_probs=76.6
Q ss_pred CCCeEEEEEecCCCCceEEEEec------------------------------CCCcEEEEEeCCCChhhhcCCCCCCEE
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCL------------------------------DSGGVFVSTVSEHSLASQVGLQVGDQL 1175 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~------------------------------~~~gv~I~~V~~gs~A~~~GL~~GD~I 1175 (1659)
...++.|.|.|...+|||+|.+. ...|++|..|.++|||+++||++||+|
T Consensus 6 ~~~~r~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I 85 (126)
T 2yuy_A 6 SGGPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLCTGDRI 85 (126)
T ss_dssp SSSCCCEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHTCCSSCCC
T ss_pred CCCCEEEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcCCCCCCEE
Confidence 34567899999999999999851 125699999999999999999999999
Q ss_pred EeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEecCC
Q psy3835 1176 LEVCGINMRSATYQLAASVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1176 l~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 1211 (1659)
++|||.++.++++.++..+++..+..|.|.|.|.+.
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred EEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 999999999999999999999889999999988764
No 234
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.95 E-value=2.5e-09 Score=117.27 Aligned_cols=84 Identities=26% Similarity=0.434 Sum_probs=77.2
Q ss_pred CCeEEEEEecC-CCCceEEEEec--CCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCL--DSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~--~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
..++.|.+.+. +.+|||++.++ ...|++|..|.+||||+++||++||+|++|||.++.++++.++..+++. +..|+
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v~ 161 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT-EKTVS 161 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS-SSEEE
T ss_pred CceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC-CCeEE
Confidence 46789999998 68999999887 3458999999999999999999999999999999999999999999988 89999
Q ss_pred EEEEecCC
Q psy3835 1204 MLVQYSPD 1211 (1659)
Q Consensus 1204 l~v~r~~~ 1211 (1659)
|+|.|.+.
T Consensus 162 l~v~r~g~ 169 (192)
T 3k1r_A 162 IKVRHIGL 169 (192)
T ss_dssp EEEEECCE
T ss_pred EEEEECCc
Confidence 99999775
No 235
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.95 E-value=2.9e-09 Score=103.94 Aligned_cols=85 Identities=22% Similarity=0.347 Sum_probs=74.9
Q ss_pred CCCCeEEEEecCCcCccCeEEecCC-CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 1312 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~-~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~ 1312 (1659)
...++.+.|.+... +|||++.++. ..|++|..|.++|||+++||++||+|++|||+++.++++.++...+...+..+.
T Consensus 4 ~~~~r~v~l~k~~~-g~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 82 (102)
T 2d90_A 4 GSSGRVVVIKKGSN-GYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTT 82 (102)
T ss_dssp CSSSEEEEEECCSS-SSSCEEEECSSSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEE
T ss_pred CCCCEEEEEeeCCC-CccEEEEeecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 35679999999775 9999998753 358999999999999999999999999999999999998888888877788999
Q ss_pred EEEEeCc
Q psy3835 1313 VLAQYSV 1319 (1659)
Q Consensus 1313 L~v~r~~ 1319 (1659)
|+|.|..
T Consensus 83 l~v~r~~ 89 (102)
T 2d90_A 83 LLVLDKE 89 (102)
T ss_dssp EEECSTT
T ss_pred EEEEECC
Confidence 9998753
No 236
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.94 E-value=1.8e-09 Score=122.68 Aligned_cols=87 Identities=31% Similarity=0.435 Sum_probs=79.0
Q ss_pred CCCCeEEEEecCCcCccCeEEecCC--CcceEEEEeCCCChhhh-cCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK 1310 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~-~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~ 1310 (1659)
...++.|.|.+....+|||+|.|+. ..|+||..|.+||||++ +||++||+|++|||+++.++++.+++.+++..++.
T Consensus 75 ~~~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~ 154 (263)
T 1z87_A 75 LLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKE 154 (263)
T ss_dssp SCSSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSC
T ss_pred CCccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCe
Confidence 3467999999987789999999874 36899999999999999 89999999999999999999999999999888899
Q ss_pred EEEEEEeCcc
Q psy3835 1311 VTVLAQYSVE 1320 (1659)
Q Consensus 1311 v~L~v~r~~~ 1320 (1659)
|+|+|.|...
T Consensus 155 V~L~V~R~~~ 164 (263)
T 1z87_A 155 VVLEVKYMKE 164 (263)
T ss_dssp CCEEEECCSS
T ss_pred EEEEEEeCcc
Confidence 9999998654
No 237
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=7.4e-10 Score=106.88 Aligned_cols=81 Identities=26% Similarity=0.322 Sum_probs=73.9
Q ss_pred CCeEEEEEecCC--CCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEE
Q psy3835 1127 GELRRVHIDKSV--EPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITM 1204 (1659)
Q Consensus 1127 ~~~~~v~l~k~~--~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 1204 (1659)
..++.|.|.+.. .+|||.+.+ ..|++|..|.++|||+ +||++||+|++|||.++.++++.++...++.++..|.|
T Consensus 7 ~~~~~v~l~~~~~~~~~G~~l~~--~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l 83 (96)
T 2edv_A 7 GVRHTVKIDKDTLLQDYGFHISE--SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSI 83 (96)
T ss_dssp CEEEEEEECCCSSSCSCSBCCCS--SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEE
T ss_pred CccEEEEEEECCCCCcccEEEec--CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 457889999986 589999976 5689999999999996 89999999999999999999999999999988999999
Q ss_pred EEEecC
Q psy3835 1205 LVQYSP 1210 (1659)
Q Consensus 1205 ~v~r~~ 1210 (1659)
+|.|+.
T Consensus 84 ~v~R~~ 89 (96)
T 2edv_A 84 TVVRCT 89 (96)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999976
No 238
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.94 E-value=2e-09 Score=108.91 Aligned_cols=84 Identities=29% Similarity=0.440 Sum_probs=72.7
Q ss_pred EEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh--CCCeEEEEEE
Q psy3835 1130 RRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ--CGNSITMLVQ 1207 (1659)
Q Consensus 1130 ~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~ 1207 (1659)
+.+.+. .+.+|||++.++...|++|..|.|+|||+++||++||+|++|||.++.++++.++...+.. .+..++|+|.
T Consensus 31 ~~~~~~-~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~ 109 (124)
T 3tsv_A 31 KLVKFR-KGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQ 109 (124)
T ss_dssp EEEEEE-CSSCCCEEEEECTTSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEEEcC-CCCceeEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEE
Confidence 344343 4579999999877789999999999999999999999999999999999999999988774 6889999999
Q ss_pred ecCCccc
Q psy3835 1208 YSPDKYH 1214 (1659)
Q Consensus 1208 r~~~~~~ 1214 (1659)
|++..+.
T Consensus 110 R~~~~~~ 116 (124)
T 3tsv_A 110 KKKDVYR 116 (124)
T ss_dssp ECHHHHH
T ss_pred ECCchhh
Confidence 9876544
No 239
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=1.6e-09 Score=103.29 Aligned_cols=82 Identities=17% Similarity=0.199 Sum_probs=73.2
Q ss_pred CCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhc-CCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~-gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
..+|+|.|.+....+|||++.+. ..|++|..|.++|||+++ +|++||+|++|||+++ +.++.++...+...++.+.|
T Consensus 5 ~~~r~v~l~k~~~~~lG~~i~~~-~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~l 82 (91)
T 2e7k_A 5 SSGRMVGIRKTAGEHLGVTFRVE-GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVIL 82 (91)
T ss_dssp CCSCBCCBCCCTTCCCCEEEEES-SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBCE
T ss_pred CCcEEEEEEECCCCcEeEEEEec-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEEE
Confidence 45688889888788999999874 569999999999999995 5999999999999999 88999999999888889999
Q ss_pred EEEeC
Q psy3835 1314 LAQYS 1318 (1659)
Q Consensus 1314 ~v~r~ 1318 (1659)
+|.|.
T Consensus 83 ~v~~~ 87 (91)
T 2e7k_A 83 KILSG 87 (91)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 99875
No 240
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=7.4e-09 Score=99.76 Aligned_cols=84 Identities=20% Similarity=0.349 Sum_probs=74.0
Q ss_pred CCCCeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhC--CCeE
Q psy3835 1125 HPGELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQC--GNSI 1202 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~~~v 1202 (1659)
...+.+.+.+.+...+|||+|... ..|++|..|.++ |+++||++||+|++|||.++.+++|.+++.+++.. +..|
T Consensus 7 ~~~~~~~v~l~~~~~g~G~~i~~~-~~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v 83 (96)
T 1ujv_A 7 GQAELMTLTIVKGAQGFGFTIADS-PTGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSET 83 (96)
T ss_dssp CCCCCEEEEEECCSSSSSEEEEEE-TTEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEE
T ss_pred CCceEEEEEEEeCCCceeEEEEcC-CCCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEE
Confidence 345778999999999999999754 458999999983 78899999999999999999999999999999984 7899
Q ss_pred EEEEEecCC
Q psy3835 1203 TMLVQYSPD 1211 (1659)
Q Consensus 1203 ~l~v~r~~~ 1211 (1659)
.|+|.|++.
T Consensus 84 ~l~v~R~g~ 92 (96)
T 1ujv_A 84 SLIIHRGSG 92 (96)
T ss_dssp EEEEECCSS
T ss_pred EEEEEECCC
Confidence 999998765
No 241
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.94 E-value=3.4e-09 Score=107.02 Aligned_cols=84 Identities=33% Similarity=0.526 Sum_probs=74.8
Q ss_pred CeEEEEEecC-CCCceEEEEecC-----------CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHH
Q psy3835 1128 ELRRVHIDKS-VEPLGIQIQCLD-----------SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASV 1194 (1659)
Q Consensus 1128 ~~~~v~l~k~-~~~lG~sl~~~~-----------~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~ 1194 (1659)
.++.+.+.+. ..+|||++.++. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++..+
T Consensus 24 ~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 103 (123)
T 2iwq_A 24 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 103 (123)
T ss_dssp CCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4588889887 478999998652 2589999999999999999 99999999999999999999999999
Q ss_pred HHhCCCeEEEEEEecCC
Q psy3835 1195 LRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1195 l~~~~~~v~l~v~r~~~ 1211 (1659)
++..+..+.|+|.|.+.
T Consensus 104 l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 104 IRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHHCCSSEEEEEECCCC
T ss_pred HHcCCCeEEEEEEECCc
Confidence 99888899999988654
No 242
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.94 E-value=2.2e-09 Score=103.79 Aligned_cols=82 Identities=24% Similarity=0.427 Sum_probs=71.6
Q ss_pred eEEEEecCCcCccCeEEecCC------CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe
Q psy3835 1238 RFLMIETRKCSNLGISLVGGN------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADK 1310 (1659)
Q Consensus 1238 ~~v~l~k~~~~~lGi~l~gg~------~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~ 1310 (1659)
..+.+.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.++...+...+..
T Consensus 5 ~~v~l~k~~-~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 83 (97)
T 2jil_A 5 VEVTLHKEG-NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQE 83 (97)
T ss_dssp EEEEEECBT-TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSE
T ss_pred EEEEEEeCC-CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 456777654 59999998864 3589999999999999999 999999999999999999999999888888899
Q ss_pred EEEEEEeCcc
Q psy3835 1311 VTVLAQYSVE 1320 (1659)
Q Consensus 1311 v~L~v~r~~~ 1320 (1659)
+.|+|.|+..
T Consensus 84 v~l~v~R~~~ 93 (97)
T 2jil_A 84 AALLIEYDVS 93 (97)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEeCCC
Confidence 9999998753
No 243
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.94 E-value=3.5e-09 Score=102.37 Aligned_cols=82 Identities=33% Similarity=0.464 Sum_probs=71.4
Q ss_pred eEEEEecCCcCccCeEEecCC--------CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCC
Q psy3835 1238 RFLMIETRKCSNLGISLVGGN--------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPAD 1309 (1659)
Q Consensus 1238 ~~v~l~k~~~~~lGi~l~gg~--------~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~ 1309 (1659)
..+.+.+. ..+|||++.++. ..|++|..|.++|||+++||++||+|++|||+++.++++.+++..+...+.
T Consensus 5 ~~v~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 83 (97)
T 2w4f_A 5 LTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGT 83 (97)
T ss_dssp EEEEEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred EEEEEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCCC
Confidence 45667776 459999998752 368999999999999999999999999999999999999988888878899
Q ss_pred eEEEEEEeCcc
Q psy3835 1310 KVTVLAQYSVE 1320 (1659)
Q Consensus 1310 ~v~L~v~r~~~ 1320 (1659)
.+.|+|.|+..
T Consensus 84 ~v~l~v~R~g~ 94 (97)
T 2w4f_A 84 AVQMRVWRERE 94 (97)
T ss_dssp EEEEEEECCSS
T ss_pred eEEEEEEeCCc
Confidence 99999999753
No 244
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.94 E-value=2.3e-09 Score=100.85 Aligned_cols=78 Identities=19% Similarity=0.300 Sum_probs=67.7
Q ss_pred EEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEE
Q psy3835 1239 FLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQ 1316 (1659)
Q Consensus 1239 ~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~ 1316 (1659)
.|++. ...+|||++.++.+ .|++|..|.++|||+++||++||+|++|||.++.++++.++...+...++.+.|+|.
T Consensus 4 ~v~l~--~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 81 (85)
T 1rgw_A 4 SVTLT--GPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQ 81 (85)
T ss_dssp EEEEC--CSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEEE
T ss_pred EEEEe--CCCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEEE
Confidence 45553 33589999998753 489999999999999999999999999999999999999999888877888999998
Q ss_pred eC
Q psy3835 1317 YS 1318 (1659)
Q Consensus 1317 r~ 1318 (1659)
|+
T Consensus 82 R~ 83 (85)
T 1rgw_A 82 KS 83 (85)
T ss_dssp SC
T ss_pred eC
Confidence 76
No 245
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=5.4e-09 Score=103.62 Aligned_cols=84 Identities=32% Similarity=0.458 Sum_probs=72.9
Q ss_pred CCeEEEEecCCcCccCeEEecC--------CCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCC
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGG--------NAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKP 1307 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg--------~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~ 1307 (1659)
....+.+.+. ..+|||++.++ ...|++|..|.++|||+++||++||+|++|||+++.++++.+++..+...
T Consensus 15 ~~~~~~l~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 93 (110)
T 1x5q_A 15 EELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGA 93 (110)
T ss_dssp EEEEEEEECS-SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred ceEEEEEecC-CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhCC
Confidence 3455677776 45999999875 23689999999999999999999999999999999999999988888888
Q ss_pred CCeEEEEEEeCcc
Q psy3835 1308 ADKVTVLAQYSVE 1320 (1659)
Q Consensus 1308 ~~~v~L~v~r~~~ 1320 (1659)
+..+.|+|.|+..
T Consensus 94 g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 94 GTAVQMRVWRESG 106 (110)
T ss_dssp CSEEEEEEEECSS
T ss_pred CCeEEEEEEECCc
Confidence 9999999999754
No 246
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.94 E-value=2e-09 Score=109.12 Aligned_cols=88 Identities=26% Similarity=0.428 Sum_probs=76.2
Q ss_pred CCCeEEEEecCCcCccCeEEecCCC---cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNA---VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADK 1310 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~---~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~ 1310 (1659)
...+.+.|.+.. .+|||++.++.+ .|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+..
T Consensus 24 ~~~~~v~l~k~~-~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~ 102 (124)
T 2daz_A 24 GELHIIELEKDK-NGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSK 102 (124)
T ss_dssp SEEEEEEEECCS-SCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSE
T ss_pred CceEEEEEEeCC-CccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 345678888875 489999998743 589999999999999988 999999999999999999999999888878889
Q ss_pred EEEEEEeCccccc
Q psy3835 1311 VTVLAQYSVERYN 1323 (1659)
Q Consensus 1311 v~L~v~r~~~~~~ 1323 (1659)
+.|+|.|+...+.
T Consensus 103 v~l~v~R~~~~~~ 115 (124)
T 2daz_A 103 VKLVFIRNEDAVN 115 (124)
T ss_dssp EEEEEEECTTHHH
T ss_pred EEEEEEeCCCccc
Confidence 9999999866543
No 247
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.94 E-value=3e-09 Score=101.51 Aligned_cols=80 Identities=25% Similarity=0.281 Sum_probs=69.3
Q ss_pred EEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEE
Q psy3835 1239 FLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQ 1316 (1659)
Q Consensus 1239 ~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~ 1316 (1659)
.+.+. ...+|||++.++.. .|++|..|.++|||+++||++||+|++|||.++.++++.++...+...+..+.|+|.
T Consensus 6 ~v~~~--~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~ 83 (91)
T 2pkt_A 6 QIDLQ--GPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVA 83 (91)
T ss_dssp EEEEE--SSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEE
T ss_pred EEEEC--CCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 34444 34589999998644 589999999999999999999999999999999999988888888888899999999
Q ss_pred eCcc
Q psy3835 1317 YSVE 1320 (1659)
Q Consensus 1317 r~~~ 1320 (1659)
|+..
T Consensus 84 R~g~ 87 (91)
T 2pkt_A 84 RSEH 87 (91)
T ss_dssp EECC
T ss_pred ECCc
Confidence 9753
No 248
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.94 E-value=2.6e-09 Score=106.34 Aligned_cols=84 Identities=21% Similarity=0.309 Sum_probs=76.0
Q ss_pred CCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCC-CCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGL-RTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 1314 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL-~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~ 1314 (1659)
.++.|.+.+....+|||++.+. ..|++|..|.++|||+++|| ++||+|++|||+++.++++.++..++...++.+.|+
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~-~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 103 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNE-MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFV 103 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEEC-SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEE
T ss_pred ceEEEEEEeCCCCceeEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 5688999998887999999876 46999999999999999999 999999999999999999999999888777899999
Q ss_pred EEeCcc
Q psy3835 1315 AQYSVE 1320 (1659)
Q Consensus 1315 v~r~~~ 1320 (1659)
|.|+..
T Consensus 104 v~r~~~ 109 (113)
T 1va8_A 104 LIPSSG 109 (113)
T ss_dssp EECCCC
T ss_pred EEECCc
Confidence 998754
No 249
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.94 E-value=2.1e-09 Score=108.18 Aligned_cols=87 Identities=24% Similarity=0.402 Sum_probs=74.2
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC---cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCC
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA---VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPAD 1309 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~---~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~ 1309 (1659)
....+++.+.+....+|||++.++.+ .|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...++
T Consensus 13 ~~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 92 (119)
T 1x6d_A 13 LDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQARE 92 (119)
T ss_dssp CTTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTS
T ss_pred CCCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45567888888878899999998753 589999999999999999 99999999999999999999999988876554
Q ss_pred -eEEEEEEeCcc
Q psy3835 1310 -KVTVLAQYSVE 1320 (1659)
Q Consensus 1310 -~v~L~v~r~~~ 1320 (1659)
.+.+++.|+..
T Consensus 93 ~~~~l~v~R~~~ 104 (119)
T 1x6d_A 93 PRQAVIVTRKLT 104 (119)
T ss_dssp SSEEEEEEECCC
T ss_pred CeEEEEEEcCCC
Confidence 45577877654
No 250
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=3.5e-09 Score=104.94 Aligned_cols=85 Identities=32% Similarity=0.413 Sum_probs=74.8
Q ss_pred CCCeEEEEecCCcCccCeEEecCC-----CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCC
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA 1308 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~-----~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~ 1308 (1659)
...+.+.|.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+
T Consensus 7 ~~~~~v~l~~~~-~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 85 (110)
T 1um1_A 7 GYVFTVELERGP-SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG 85 (110)
T ss_dssp CCEEEEEEECCT-TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCC
T ss_pred CcEEEEEEEECC-CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 445678888876 48999998863 3589999999999999999 9999999999999999999999999998888
Q ss_pred CeEEEEEEeCcc
Q psy3835 1309 DKVTVLAQYSVE 1320 (1659)
Q Consensus 1309 ~~v~L~v~r~~~ 1320 (1659)
..+.|+|.|+..
T Consensus 86 ~~v~l~v~R~~~ 97 (110)
T 1um1_A 86 KKMRFLVAKSDV 97 (110)
T ss_dssp SEEEEEEECCCH
T ss_pred CeEEEEEEeCCc
Confidence 999999998754
No 251
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.93 E-value=3.3e-09 Score=100.51 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=68.7
Q ss_pred eEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEE
Q psy3835 1238 RFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 1315 (1659)
Q Consensus 1238 ~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v 1315 (1659)
..+.+ + ...+|||++.++.+ .|++|..|.++|||+++||++||+|++|||.++.++++.++...+...+..+.|+|
T Consensus 5 ~~v~l-~-~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v 82 (88)
T 2uzc_A 5 YSVSL-V-GPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTL 82 (88)
T ss_dssp EEEEE-E-SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEE
T ss_pred EEEEE-c-CCCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence 44556 3 34589999998643 47999999999999999999999999999999999998888888887788999999
Q ss_pred EeCc
Q psy3835 1316 QYSV 1319 (1659)
Q Consensus 1316 ~r~~ 1319 (1659)
.|+.
T Consensus 83 ~R~g 86 (88)
T 2uzc_A 83 QRES 86 (88)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 8863
No 252
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.93 E-value=4.9e-09 Score=100.45 Aligned_cols=82 Identities=27% Similarity=0.406 Sum_probs=72.0
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
...+|.+.|.+... +|||++.+. .|++|..|.++|||+++||++||+|++|||+++.++++.+++..++ .+..+.|
T Consensus 6 ~~~~r~v~l~~~~~-~~G~~l~~~--~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~l 81 (93)
T 2dls_A 6 SGVQRCVIIQKDQH-GFGFTVSGD--RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVAL 81 (93)
T ss_dssp CCCEEEEEEECSSS-SCCEEEECS--SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEEE
T ss_pred CCCCEEEEEEeCCC-ceeEEEeCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEEE
Confidence 35678889988764 899999864 5899999999999999999999999999999999999988777765 6899999
Q ss_pred EEEeCc
Q psy3835 1314 LAQYSV 1319 (1659)
Q Consensus 1314 ~v~r~~ 1319 (1659)
+|.|+.
T Consensus 82 ~v~R~~ 87 (93)
T 2dls_A 82 TLLGSS 87 (93)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 999874
No 253
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.93 E-value=3.5e-09 Score=104.43 Aligned_cols=85 Identities=26% Similarity=0.362 Sum_probs=73.8
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC--------------cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHH
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA--------------VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEE 1299 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~--------------~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~ 1299 (1659)
+..++.+.|.+... +|||++.++.. .++||..|.++|||+++||++||+|++|||.++.++++.+
T Consensus 4 ~~~~r~v~l~k~~~-g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~ 82 (107)
T 3qe1_A 4 GGSPRVVRIVKSES-GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQ 82 (107)
T ss_dssp --CCEEEEEECBTT-BTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH
T ss_pred CCCcEEEEEEECCC-CCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH
Confidence 45678999999876 89999988632 2357999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCeEEEEEEeCc
Q psy3835 1300 AAYELAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1300 ~~~~l~~~~~~v~L~v~r~~ 1319 (1659)
+...+...+..+.|+|.|..
T Consensus 83 ~~~~l~~~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 83 VVDLIRAGEKELILTVLSVE 102 (107)
T ss_dssp HHHHHHHCSSEEEEEEECSS
T ss_pred HHHHHHcCCCEEEEEEEcCC
Confidence 99998888899999999864
No 254
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=1.6e-09 Score=105.70 Aligned_cols=86 Identities=31% Similarity=0.430 Sum_probs=73.8
Q ss_pred CCCCeEEEEEecC--CCCceEEEEecC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCC
Q psy3835 1125 HPGELRRVHIDKS--VEPLGIQIQCLD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGN 1200 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~--~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 1200 (1659)
.+.+++.|.+.+. ..+|||+|.+.. ..|++|..|.++|||+++||++||+|++|||.++.++++.+++..++. +.
T Consensus 5 ~~~~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~ 83 (101)
T 1uez_A 5 SSGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKG-SK 83 (101)
T ss_dssp CSCCCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHSSS-SS
T ss_pred CCCccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhhcC-CC
Confidence 4467888988884 579999999874 468999999999999999999999999999999999999877776654 56
Q ss_pred eEEEEEEecCC
Q psy3835 1201 SITMLVQYSPD 1211 (1659)
Q Consensus 1201 ~v~l~v~r~~~ 1211 (1659)
.+.|+|.|++.
T Consensus 84 ~v~l~v~R~g~ 94 (101)
T 1uez_A 84 KLVLSVYSAGR 94 (101)
T ss_dssp SCCEEECCCCC
T ss_pred eEEEEEEECCc
Confidence 88899988765
No 255
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.93 E-value=2.9e-09 Score=104.36 Aligned_cols=86 Identities=16% Similarity=0.267 Sum_probs=75.0
Q ss_pred CCCCeEEEEecCCcCccCeEEecCC----CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCC
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGN----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA 1308 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~----~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~ 1308 (1659)
....+.+.|.+... +|||++.++. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+
T Consensus 9 ~~~~~~v~l~~~~~-g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 87 (104)
T 2djt_A 9 ASGHFSVELVRGYA-GFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGG 87 (104)
T ss_dssp CCCCEEEEEECCSS-SCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTC
T ss_pred CCceEEEEEEeCCC-CccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 35667888888774 8999999853 4589999999999999999 9999999999999999999999888887778
Q ss_pred CeEEEEEEeCcc
Q psy3835 1309 DKVTVLAQYSVE 1320 (1659)
Q Consensus 1309 ~~v~L~v~r~~~ 1320 (1659)
..+.|+|.|+..
T Consensus 88 ~~v~l~v~R~g~ 99 (104)
T 2djt_A 88 PQLHLVIRRPLS 99 (104)
T ss_dssp SEEEEEECCCCC
T ss_pred CeEEEEEEECCC
Confidence 899999988754
No 256
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=1.6e-09 Score=108.01 Aligned_cols=91 Identities=41% Similarity=0.689 Sum_probs=80.9
Q ss_pred CCCCeEEEEecCCcCccCeEEecCC-CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~-~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
...++.|.|.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.++...+...+..+
T Consensus 13 ~~~~~~v~l~k~~-~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v 91 (113)
T 1um7_A 13 AREPRKIILHKGS-TGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSV 91 (113)
T ss_dssp CCSEEEEEEECCS-SCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEE
T ss_pred CCceEEEEEEECC-CcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 4677889998876 58999998775 3689999999999999999 9999999999999999999999988888888999
Q ss_pred EEEEEeCccccccc
Q psy3835 1312 TVLAQYSVERYNEV 1325 (1659)
Q Consensus 1312 ~L~v~r~~~~~~~~ 1325 (1659)
.|+|.|++..|..+
T Consensus 92 ~l~v~r~~~~~~~~ 105 (113)
T 1um7_A 92 TIVAQYRPEEYSRF 105 (113)
T ss_dssp EEEEECCHHHHHHH
T ss_pred EEEEEECcchhhhh
Confidence 99999998777655
No 257
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.93 E-value=3.9e-09 Score=100.00 Aligned_cols=77 Identities=22% Similarity=0.383 Sum_probs=67.2
Q ss_pred EEEEecC--CCCceEEEEecCCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEE
Q psy3835 1131 RVHIDKS--VEPLGIQIQCLDSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQ 1207 (1659)
Q Consensus 1131 ~v~l~k~--~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~ 1207 (1659)
.+.+.+. ..+|||.+.+ |++|..|.+||||+++| |++||+|++|||.++.++++.++..+++.++..++|++.
T Consensus 3 ~v~l~~~~~~~~~G~~~~~----gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~ 78 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS----QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVL 78 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE----EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEC
T ss_pred EEEEEeCCCCCCCCEEEeC----CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEe
Confidence 3556654 4689999875 79999999999999999 999999999999999999999999999999999999997
Q ss_pred ecCC
Q psy3835 1208 YSPD 1211 (1659)
Q Consensus 1208 r~~~ 1211 (1659)
+.+.
T Consensus 79 ~~~~ 82 (88)
T 3e17_A 79 RDLE 82 (88)
T ss_dssp CC--
T ss_pred CCCc
Confidence 6544
No 258
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.93 E-value=3e-09 Score=108.06 Aligned_cols=83 Identities=23% Similarity=0.316 Sum_probs=75.0
Q ss_pred CCeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 1312 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~ 1312 (1659)
.++.+.+.+....+|||++.++.. .|++|..|.+||||+++| |++||+|++|||+++.++++.+++..+...++.++
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~ 98 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 98 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred CCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 457788999888899999998753 579999999999999999 99999999999999999999999999988888899
Q ss_pred EEEEeC
Q psy3835 1313 VLAQYS 1318 (1659)
Q Consensus 1313 L~v~r~ 1318 (1659)
|+|.|.
T Consensus 99 l~v~r~ 104 (125)
T 3hpk_A 99 IHYNKL 104 (125)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 999874
No 259
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=3.4e-09 Score=106.76 Aligned_cols=85 Identities=27% Similarity=0.434 Sum_probs=75.5
Q ss_pred CCCeEEEEecCCcCccCeEEecCC-------CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcC
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK 1306 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~-------~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~ 1306 (1659)
..++.|.|.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+..
T Consensus 16 ~~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 94 (120)
T 2eno_A 16 VTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 94 (120)
T ss_dssp EEEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH
T ss_pred CceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 355778899877 69999999863 3589999999999999999 99999999999999999999999988887
Q ss_pred CCCeEEEEEEeCcc
Q psy3835 1307 PADKVTVLAQYSVE 1320 (1659)
Q Consensus 1307 ~~~~v~L~v~r~~~ 1320 (1659)
.+..+.|+|.|+..
T Consensus 95 ~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 95 AGYAVSLRVQHRLQ 108 (120)
T ss_dssp HCSEEEEEEEEEEE
T ss_pred CCCeEEEEEEeCCc
Confidence 78899999999765
No 260
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.92 E-value=1.9e-09 Score=102.61 Aligned_cols=81 Identities=19% Similarity=0.377 Sum_probs=70.2
Q ss_pred CeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCC--CeE
Q psy3835 1237 PRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA--DKV 1311 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~--~~v 1311 (1659)
++.+.|.+... +|||++.++.. .|++|..|.++|||+++| |++||+|++|||.++.+.++.++...+.... +.+
T Consensus 3 ~~~v~l~~~~~-g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v 81 (90)
T 2q9v_A 3 EQDIFLWRKET-GFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHV 81 (90)
T ss_dssp EEEEEEECBTT-BCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEE
T ss_pred cEEEEEEECCC-ccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 46688888764 89999998633 579999999999999999 9999999999999999999999988887653 489
Q ss_pred EEEEEeC
Q psy3835 1312 TVLAQYS 1318 (1659)
Q Consensus 1312 ~L~v~r~ 1318 (1659)
.|+|.|.
T Consensus 82 ~l~v~R~ 88 (90)
T 2q9v_A 82 NLTVRQT 88 (90)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9999875
No 261
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.92 E-value=4.5e-09 Score=105.25 Aligned_cols=88 Identities=35% Similarity=0.553 Sum_probs=76.0
Q ss_pred CCCeEEEEecCCcCccCeEEecCCC---cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNA---VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADK 1310 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~---~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~ 1310 (1659)
...+.+.+.+.. .+|||++.++.+ .|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+..
T Consensus 16 ~~~~~v~l~~~~-~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 94 (116)
T 2dm8_A 16 GQEMIIEISKGR-SGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQK 94 (116)
T ss_dssp TSCEEEEEECCS-SCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSE
T ss_pred CCEEEEEEEECC-CcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 345778887765 489999998654 589999999999999999 999999999999999999999999888877899
Q ss_pred EEEEEEeCccccc
Q psy3835 1311 VTVLAQYSVERYN 1323 (1659)
Q Consensus 1311 v~L~v~r~~~~~~ 1323 (1659)
+.|+|.|+...+.
T Consensus 95 v~l~v~R~~~~~~ 107 (116)
T 2dm8_A 95 VRLVVYRDEAHYR 107 (116)
T ss_dssp EEEEEECCSSCCC
T ss_pred EEEEEEeCCcccc
Confidence 9999998765443
No 262
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.92 E-value=9.5e-09 Score=127.96 Aligned_cols=151 Identities=15% Similarity=0.103 Sum_probs=97.4
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCH----------HHHHHHHHhCCCeEEEEEEecCCccc---cc
Q psy3835 1150 SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATY----------QLAASVLRQCGNSITMLVQYSPDKYH---EL 1216 (1659)
Q Consensus 1150 ~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~----------~~~~~~l~~~~~~v~l~v~r~~~~~~---~~ 1216 (1659)
..|++|..|.|+|||+++ |++||.|++|||..|.+... ......-+.+|+.|+|+|.|++.... .+
T Consensus 276 ~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl 354 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVL 354 (539)
T ss_dssp SBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEEC
T ss_pred cCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEE
Confidence 469999999999999876 99999999999999975432 12222334579999999999987543 11
Q ss_pred cCCCCCCCc---ccccCCCCCCCCeEEEEecCC-----cCccCeEEe---------cCCCcceEEEEeCCCChhhhcCCC
Q psy3835 1217 EGSGSSSAE---NESVSGRGSGEPRFLMIETRK-----CSNLGISLV---------GGNAVGIYVHSVQSGSLGYSAGLR 1279 (1659)
Q Consensus 1217 ~~~~~~~~~---~~~~~~~~~~~~~~v~l~k~~-----~~~lGi~l~---------gg~~~gi~V~~V~~gs~A~~~gL~ 1279 (1659)
...+...+. ..........+..+..|+..- ...+|+.+. .....|++|+.|.++++|...|++
T Consensus 355 ~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~ 434 (539)
T 4fln_A 355 RPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDM 434 (539)
T ss_dssp BCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSC
T ss_pred ccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCC
Confidence 111100000 000000011122333333211 112222111 012358999999999999999999
Q ss_pred CCCEEEEECCeeCCCcCHHHHH
Q psy3835 1280 TGDRILEYNGTDLRAATAEEAA 1301 (1659)
Q Consensus 1280 ~GD~Il~VNg~~v~~~t~~~~~ 1301 (1659)
+||+|++|||++|.+..+...+
T Consensus 435 ~gdiI~~vNg~~V~s~~~l~~~ 456 (539)
T 4fln_A 435 NNQQVLKFNGIPIRNIHHLAHL 456 (539)
T ss_dssp CSEEEEEETTEECCSHHHHHHH
T ss_pred CCCEEEeECCEEcCCHHHHHHH
Confidence 9999999999999998877554
No 263
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=2.5e-09 Score=103.97 Aligned_cols=85 Identities=16% Similarity=0.250 Sum_probs=72.9
Q ss_pred CCCeEEEEEecC-CCCceEEEEecC--CCcEEEEEeCCCChhhhc-CCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe
Q psy3835 1126 PGELRRVHIDKS-VEPLGIQIQCLD--SGGVFVSTVSEHSLASQV-GLQVGDQLLEVCGINMRSATYQLAASVLRQCGNS 1201 (1659)
Q Consensus 1126 ~~~~~~v~l~k~-~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~-GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 1201 (1659)
+++.+.+.+... +.+|||++.++. ..+++|..|.++|||+++ ||++||+|++|||.++.++ +.++...++..+..
T Consensus 7 ~~~~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~ 85 (100)
T 2edp_A 7 GGSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRI 85 (100)
T ss_dssp CCCCEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSS
T ss_pred CCCcEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCe
Confidence 345666776665 469999999873 357999999999999999 8999999999999999997 88889999888889
Q ss_pred EEEEEEecCC
Q psy3835 1202 ITMLVQYSPD 1211 (1659)
Q Consensus 1202 v~l~v~r~~~ 1211 (1659)
+.|+|.|++.
T Consensus 86 v~l~v~R~~~ 95 (100)
T 2edp_A 86 LKLIVRRRNS 95 (100)
T ss_dssp CEEEEEECCC
T ss_pred EEEEEEeCCC
Confidence 9999999765
No 264
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.91 E-value=4.1e-09 Score=101.44 Aligned_cols=78 Identities=27% Similarity=0.362 Sum_probs=67.9
Q ss_pred EEEEecCCcCccCeEEecCC----------CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCC
Q psy3835 1239 FLMIETRKCSNLGISLVGGN----------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPA 1308 (1659)
Q Consensus 1239 ~v~l~k~~~~~lGi~l~gg~----------~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~ 1308 (1659)
.+.+.+.. +|||++.++. ..|++|..|.++|||++ ||++||+|++|||+++.++++.+++..+...+
T Consensus 6 ~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (95)
T 1mfg_A 6 RVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ 82 (95)
T ss_dssp EEEEECSS--SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred EEEECCCC--CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhcCC
Confidence 35555544 7999999863 24899999999999999 99999999999999999999999988888788
Q ss_pred CeEEEEEEeCc
Q psy3835 1309 DKVTVLAQYSV 1319 (1659)
Q Consensus 1309 ~~v~L~v~r~~ 1319 (1659)
..+.|+|.|+.
T Consensus 83 ~~v~l~v~R~~ 93 (95)
T 1mfg_A 83 NTVELIIVREV 93 (95)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 99999999864
No 265
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.91 E-value=1.9e-09 Score=103.52 Aligned_cols=76 Identities=21% Similarity=0.300 Sum_probs=68.9
Q ss_pred cCCCCceEEEEecC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEecCC
Q psy3835 1136 KSVEPLGIQIQCLD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1136 k~~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 1211 (1659)
+...+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++...++..+..+.|.|.|++.
T Consensus 13 ~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g~ 90 (94)
T 1vb7_A 13 AGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSSG 90 (94)
T ss_dssp CSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCC
T ss_pred cCCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCc
Confidence 45679999998863 35899999999999999999999999999999999999999999999877899999999765
No 266
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=2.4e-09 Score=105.60 Aligned_cols=82 Identities=28% Similarity=0.440 Sum_probs=71.9
Q ss_pred CeEEEEecCCcCccCeEEec---C-----CCcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC
Q psy3835 1237 PRFLMIETRKCSNLGISLVG---G-----NAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 1307 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~g---g-----~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~ 1307 (1659)
.+.+.|.+.. .+|||++.+ + ...|+||..|.++|||+++| |++||+|++|||+++.++++.+++..+...
T Consensus 10 ~~~v~l~k~~-~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 88 (107)
T 1wf8_A 10 LFPVELEKDE-DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT 88 (107)
T ss_dssp EEEEEEECBT-TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC
T ss_pred EEEEEEEECC-CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 4557777765 489999998 2 23589999999999999999 999999999999999999999999888888
Q ss_pred CCeEEEEEEeCc
Q psy3835 1308 ADKVTVLAQYSV 1319 (1659)
Q Consensus 1308 ~~~v~L~v~r~~ 1319 (1659)
+..+.|+|.|+.
T Consensus 89 ~~~v~l~v~R~~ 100 (107)
T 1wf8_A 89 KGNVRFVIGREK 100 (107)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEeCC
Confidence 899999999864
No 267
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.91 E-value=2.6e-09 Score=107.51 Aligned_cols=85 Identities=16% Similarity=0.328 Sum_probs=75.0
Q ss_pred CCCeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhc--CCCCCCEEEEECCeeCCCcCHHHHHHHHcCCC--
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSA--GLRTGDRILEYNGTDLRAATAEEAAYELAKPA-- 1308 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~--gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~-- 1308 (1659)
...+++.+.+....+|||++.++.+ .|++|..|.++|||+++ ||++||+|++|||+++.++++.+++..++..+
T Consensus 14 ~~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~ 93 (119)
T 2cs5_A 14 DNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCER 93 (119)
T ss_dssp SCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHC
T ss_pred CCeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccc
Confidence 4568899999887789999998743 48999999999999998 99999999999999999999999998887663
Q ss_pred --CeEEEEEEeCc
Q psy3835 1309 --DKVTVLAQYSV 1319 (1659)
Q Consensus 1309 --~~v~L~v~r~~ 1319 (1659)
..+.|+|.|+.
T Consensus 94 ~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 94 HSGELMLLVRPNA 106 (119)
T ss_dssp CSSCEEEEEECCC
T ss_pred CCCEEEEEEEccc
Confidence 58999999873
No 268
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=5.9e-09 Score=103.51 Aligned_cols=86 Identities=28% Similarity=0.471 Sum_probs=74.8
Q ss_pred CCCCeEEEEEecCCC---CceEEEEecC---CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhC
Q psy3835 1125 HPGELRRVHIDKSVE---PLGIQIQCLD---SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQC 1198 (1659)
Q Consensus 1125 ~~~~~~~v~l~k~~~---~lG~sl~~~~---~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 1198 (1659)
.+..++.|.|.+.+. +|||+|.+.. ..|++|..|.++|||+++||++||+|++|||.++.++++.++..+++.
T Consensus 12 ~~~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~- 90 (114)
T 2d8i_A 12 CPKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ- 90 (114)
T ss_dssp SCCEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS-
T ss_pred ccCceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC-
Confidence 356789999999864 7999998752 258999999999999999999999999999999999999999888875
Q ss_pred CCeEEEEEEecCCc
Q psy3835 1199 GNSITMLVQYSPDK 1212 (1659)
Q Consensus 1199 ~~~v~l~v~r~~~~ 1212 (1659)
..+.|+|.|.+..
T Consensus 91 -~~v~l~v~R~p~~ 103 (114)
T 2d8i_A 91 -PSLGLLVRTYPEL 103 (114)
T ss_dssp -SEEEEEEEECCCS
T ss_pred -CcEEEEEEECCCC
Confidence 4899999998763
No 269
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.91 E-value=4.3e-09 Score=106.32 Aligned_cols=86 Identities=36% Similarity=0.561 Sum_probs=74.8
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC-----------cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHH
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA-----------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAA 1301 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~-----------~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~ 1301 (1659)
+..++.+.+.+.....|||++.++.. .|++|..|.+||||+++| |++||+|++|||+++.+++..++.
T Consensus 22 ~~~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~ 101 (123)
T 2iwq_A 22 SMQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAV 101 (123)
T ss_dssp -CCCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred cCCCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 45678889988877799999986432 489999999999999999 999999999999999999999999
Q ss_pred HHHcCCCCeEEEEEEeCc
Q psy3835 1302 YELAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1302 ~~l~~~~~~v~L~v~r~~ 1319 (1659)
..+...++.+.|+|.|..
T Consensus 102 ~~l~~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 102 EAIRKAGNPVVFMVQSII 119 (123)
T ss_dssp HHHHHCCSSEEEEEECCC
T ss_pred HHHHcCCCeEEEEEEECC
Confidence 988877889999998864
No 270
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.91 E-value=4.6e-09 Score=128.57 Aligned_cols=86 Identities=29% Similarity=0.468 Sum_probs=79.2
Q ss_pred eEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh--CCCeEEEEE
Q psy3835 1129 LRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ--CGNSITMLV 1206 (1659)
Q Consensus 1129 ~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v 1206 (1659)
++.|.+.++ .+|||++.++...|+||..|.+||||+++||++||+|++|||.++.++++.+++.+++. +|..|+|+|
T Consensus 2 ~r~V~l~k~-~~lG~~i~gg~~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V 80 (468)
T 3shw_A 2 MKLVKFRKG-DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILA 80 (468)
T ss_dssp EEEEEEECC-SSCCEEEEEETTTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEE
T ss_pred ceEEEEecC-CccceEEEccCcCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEE
Confidence 578889886 89999999988899999999999999999999999999999999999999999999998 789999999
Q ss_pred EecCCcccc
Q psy3835 1207 QYSPDKYHE 1215 (1659)
Q Consensus 1207 ~r~~~~~~~ 1215 (1659)
.|++..+..
T Consensus 81 ~r~g~~~~~ 89 (468)
T 3shw_A 81 QKKKDVYRR 89 (468)
T ss_dssp EECHHHHHH
T ss_pred EECCccchh
Confidence 998875543
No 271
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.90 E-value=3.6e-09 Score=103.75 Aligned_cols=79 Identities=28% Similarity=0.452 Sum_probs=69.5
Q ss_pred CeEEEEEecC-CCCceEEEEec---------CCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh
Q psy3835 1128 ELRRVHIDKS-VEPLGIQIQCL---------DSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ 1197 (1659)
Q Consensus 1128 ~~~~v~l~k~-~~~lG~sl~~~---------~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 1197 (1659)
.++.+.+.+. .++|||+|.+. ...|++|..|.++|||+++||++||+|++|||.++.++++.++..+++.
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~ 94 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRS 94 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHH
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 4567788887 57899999983 2469999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEE
Q psy3835 1198 CGNSITMLV 1206 (1659)
Q Consensus 1198 ~~~~v~l~v 1206 (1659)
.+..|+|+|
T Consensus 95 ~~~~v~l~v 103 (104)
T 2z17_A 95 SGNLLTIET 103 (104)
T ss_dssp TTTEEEEEC
T ss_pred CCCcEEEEE
Confidence 877777765
No 272
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.90 E-value=7.5e-09 Score=103.07 Aligned_cols=83 Identities=18% Similarity=0.254 Sum_probs=73.3
Q ss_pred CCeEEEEEecCC-CCceEEEEecCC--CcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeE
Q psy3835 1127 GELRRVHIDKSV-EPLGIQIQCLDS--GGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSI 1202 (1659)
Q Consensus 1127 ~~~~~v~l~k~~-~~lG~sl~~~~~--~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 1202 (1659)
..++.|.+.+.. ++|||++.++.. .+++|..|.++|||+++| |++||+|++|||.++.+.++.++..+++..+..+
T Consensus 23 ~~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v 102 (114)
T 2gzv_A 23 MVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEV 102 (114)
T ss_dssp CCCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred CCCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 457899999986 569999998744 479999999999999999 9999999999999999999999999998887888
Q ss_pred EEEEEec
Q psy3835 1203 TMLVQYS 1209 (1659)
Q Consensus 1203 ~l~v~r~ 1209 (1659)
.|+|.+.
T Consensus 103 ~l~v~~~ 109 (114)
T 2gzv_A 103 TIHYNKL 109 (114)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 8888643
No 273
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.90 E-value=5.8e-09 Score=101.45 Aligned_cols=85 Identities=29% Similarity=0.449 Sum_probs=73.6
Q ss_pred CCCeEEEEecCCcCccCeEEecCC--CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 1312 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~ 1312 (1659)
..++.+.|.+.....|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.+++..+.. +..+.
T Consensus 9 ~~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~ 87 (100)
T 2eeh_A 9 DIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS-SSRLH 87 (100)
T ss_dssp CEECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS-CSSEE
T ss_pred CeEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC-CCEEE
Confidence 345668888888778999998764 358999999999999999999999999999999999998888877765 79999
Q ss_pred EEEEeCcc
Q psy3835 1313 VLAQYSVE 1320 (1659)
Q Consensus 1313 L~v~r~~~ 1320 (1659)
|+|.|+..
T Consensus 88 l~v~R~g~ 95 (100)
T 2eeh_A 88 MMVRRMGS 95 (100)
T ss_dssp EEEEECSC
T ss_pred EEEEECCc
Confidence 99999753
No 274
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=2.3e-09 Score=105.52 Aligned_cols=85 Identities=25% Similarity=0.427 Sum_probs=75.0
Q ss_pred CCCCeEEEEecCCcCccCeEEecCC-CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 1312 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~-~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~ 1312 (1659)
+..++++.|.+. ..+|||++.++. ..|++|..|.++|||+++||++||+|++|||+++.++++.+++..+...++.+.
T Consensus 6 ~~~~r~v~l~k~-~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 84 (106)
T 2eei_A 6 SGQPRLCYLVKE-GGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVM 84 (106)
T ss_dssp CSSSEEEEEECC-SSSCSCCEECCSSCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEEEEC-CCCCCEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 567899999995 559999997654 358999999999999999999999999999999999999999888877788999
Q ss_pred EEEEeCc
Q psy3835 1313 VLAQYSV 1319 (1659)
Q Consensus 1313 L~v~r~~ 1319 (1659)
|+|.|..
T Consensus 85 l~v~r~~ 91 (106)
T 2eei_A 85 FLLVDKE 91 (106)
T ss_dssp EEECCTT
T ss_pred EEEEcCc
Confidence 9998763
No 275
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=5e-09 Score=100.61 Aligned_cols=82 Identities=27% Similarity=0.302 Sum_probs=71.0
Q ss_pred CCeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
.++.|.+.. ..+|||++.++.+ .+++|..|.++|||+++||++||+|++|||+++.++++.++...+...+..+.|
T Consensus 8 ~~~~v~l~~--~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 85 (94)
T 2eeg_A 8 MPHSVTLRG--PSPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTL 85 (94)
T ss_dssp CCEEEEECC--SSCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEE
T ss_pred ceEEEEEeC--CCccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 456677743 3489999998753 589999999999999999999999999999999999999988888888889999
Q ss_pred EEEeCc
Q psy3835 1314 LAQYSV 1319 (1659)
Q Consensus 1314 ~v~r~~ 1319 (1659)
+|.|+.
T Consensus 86 ~v~R~g 91 (94)
T 2eeg_A 86 SVSSGP 91 (94)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 998864
No 276
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.89 E-value=7.6e-09 Score=97.32 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=66.4
Q ss_pred EEEEecCCcCccCeEEecCC--CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC--CCeEEE
Q psy3835 1239 FLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP--ADKVTV 1313 (1659)
Q Consensus 1239 ~v~l~k~~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~--~~~v~L 1313 (1659)
.+.+.+... +|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.++...+... +..+.|
T Consensus 3 ~v~l~k~~~-g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l 81 (85)
T 2i04_A 3 HTKLRKSSR-GFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDL 81 (85)
T ss_dssp EEEEECBTT-BSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEE
T ss_pred EEEEEECCC-CCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEE
Confidence 356666554 8999998853 3479999999999999999 999999999999999999999988888765 678888
Q ss_pred EEEe
Q psy3835 1314 LAQY 1317 (1659)
Q Consensus 1314 ~v~r 1317 (1659)
+|.|
T Consensus 82 ~v~R 85 (85)
T 2i04_A 82 ELCR 85 (85)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8864
No 277
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.89 E-value=1.9e-09 Score=110.27 Aligned_cols=77 Identities=32% Similarity=0.512 Sum_probs=67.0
Q ss_pred ecCCcCccCeEEecCCC-----cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC--CCeEEEE
Q psy3835 1243 ETRKCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP--ADKVTVL 1314 (1659)
Q Consensus 1243 ~k~~~~~lGi~l~gg~~-----~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~--~~~v~L~ 1314 (1659)
.+....+|||++.++.. .|+||..|.+||||+++| |++||+|++|||+++.++++.+++.+|... +..|.|+
T Consensus 43 ~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~ 122 (131)
T 1wfg_A 43 PRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELV 122 (131)
T ss_dssp CSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEE
T ss_pred ecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEE
Confidence 33467799999987532 389999999999999999 999999999999999999999999888764 4899999
Q ss_pred EEeCc
Q psy3835 1315 AQYSV 1319 (1659)
Q Consensus 1315 v~r~~ 1319 (1659)
|.|+.
T Consensus 123 v~R~g 127 (131)
T 1wfg_A 123 VSRSG 127 (131)
T ss_dssp EEEEC
T ss_pred EEcCC
Confidence 99863
No 278
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.88 E-value=4.4e-09 Score=107.48 Aligned_cols=86 Identities=26% Similarity=0.393 Sum_probs=75.2
Q ss_pred CCCeEEEEecCCcCccCeEEecC-------CCcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcC
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGG-------NAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK 1306 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg-------~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~ 1306 (1659)
...+.|.+.+....+|||++.++ ...|++|..|.+||||+++| |++||+|++|||+++.++++.++..++..
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 93 (129)
T 2dmz_A 14 FETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN 93 (129)
T ss_dssp EEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH
T ss_pred CcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 44566888776677999999874 34689999999999999999 99999999999999999999999988888
Q ss_pred CCCeEEEEEEeCcc
Q psy3835 1307 PADKVTVLAQYSVE 1320 (1659)
Q Consensus 1307 ~~~~v~L~v~r~~~ 1320 (1659)
.+..+.|+|.|+..
T Consensus 94 ~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 94 AGQVVHLTLVRRKT 107 (129)
T ss_dssp CCSSEEEEEEEESS
T ss_pred CCCeEEEEEEeCCc
Confidence 88999999998753
No 279
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.88 E-value=3.6e-09 Score=106.16 Aligned_cols=73 Identities=21% Similarity=0.324 Sum_probs=64.4
Q ss_pred cCCCCcCeEec-------CceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcC----CCeEEEEE
Q psy3835 820 NNSYDHGLTLE-------SGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDS----PDVLTITT 888 (1659)
Q Consensus 820 ~~~~~lG~~~~-------~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~----~~~v~l~v 888 (1659)
....+|||++. ++++|.+|.+||||+++|+|++||+|++|||.++.+ ++|++++.+|+.. +..|+|+|
T Consensus 25 ~~~~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~-~~~~~~~~~l~~~~~~~g~~v~l~v 103 (118)
T 1v6b_A 25 KKEGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTD-YTLAEAEAALQKAWNQGGDWIDLVV 103 (118)
T ss_dssp ESCSCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTT-CBHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCCccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHHhhhcCCCeEEEEE
Confidence 34458999994 238999999999999998899999999999999999 9999999999875 67999999
Q ss_pred EccCC
Q psy3835 889 LKPTS 893 (1659)
Q Consensus 889 ~r~~~ 893 (1659)
.|..+
T Consensus 104 ~r~~~ 108 (118)
T 1v6b_A 104 AVCPP 108 (118)
T ss_dssp ECCCS
T ss_pred EeCCc
Confidence 99754
No 280
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.88 E-value=3.4e-09 Score=105.63 Aligned_cols=82 Identities=28% Similarity=0.440 Sum_probs=71.8
Q ss_pred eEEEEecCCcCccCeEEec---C-----CCcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCC
Q psy3835 1238 RFLMIETRKCSNLGISLVG---G-----NAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA 1308 (1659)
Q Consensus 1238 ~~v~l~k~~~~~lGi~l~g---g-----~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~ 1308 (1659)
+.+.|.+.. .+|||++.+ + ...|++|..|.+||||+++| |++||+|++|||.++.++++.+++..+...+
T Consensus 6 ~~v~l~k~~-~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 84 (113)
T 2g5m_B 6 FPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTK 84 (113)
T ss_dssp EEEECCCCS-SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred EEEEEEeCC-CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 456676755 589999988 3 24599999999999999999 9999999999999999999999998888889
Q ss_pred CeEEEEEEeCcc
Q psy3835 1309 DKVTVLAQYSVE 1320 (1659)
Q Consensus 1309 ~~v~L~v~r~~~ 1320 (1659)
..+.|+|.|+..
T Consensus 85 ~~v~l~v~R~~~ 96 (113)
T 2g5m_B 85 GRVRFMIGRERP 96 (113)
T ss_dssp SSCEEEEEECCC
T ss_pred CeEEEEEEeCCC
Confidence 999999999754
No 281
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.88 E-value=1.9e-09 Score=109.72 Aligned_cols=80 Identities=24% Similarity=0.480 Sum_probs=69.9
Q ss_pred EEEecCCcCccCeEEecCCC------cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC-----
Q psy3835 1240 LMIETRKCSNLGISLVGGNA------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP----- 1307 (1659)
Q Consensus 1240 v~l~k~~~~~lGi~l~gg~~------~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~----- 1307 (1659)
+.+.+....+|||++.++.. .|+||..|.+||||+++| |++||+|++|||+++.++++.+++.+|+..
T Consensus 29 v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g 108 (127)
T 1wg6_A 29 IPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEG 108 (127)
T ss_dssp EECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhcccc
Confidence 44555566799999998642 489999999999999988 999999999999999999999999998865
Q ss_pred --CCeEEEEEEeCc
Q psy3835 1308 --ADKVTVLAQYSV 1319 (1659)
Q Consensus 1308 --~~~v~L~v~r~~ 1319 (1659)
+..|+|+|.|+.
T Consensus 109 ~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 109 NIRGMIQLVILRRS 122 (127)
T ss_dssp HHTCEEEEEEEECS
T ss_pred CCCCEEEEEEEeCC
Confidence 789999999874
No 282
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=3.6e-09 Score=104.49 Aligned_cols=84 Identities=32% Similarity=0.471 Sum_probs=73.8
Q ss_pred CCCeEEEEecCCcCccCeEEe-----cCC-----CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHH
Q psy3835 1235 GEPRFLMIETRKCSNLGISLV-----GGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYE 1303 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~-----gg~-----~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~ 1303 (1659)
...+.+.|.+.. .+|||++. ++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..
T Consensus 8 ~~~~~v~l~k~~-~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 8 GDIFEVELAKND-NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSEEEEEEESSS-CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CcEEEEEEEECC-CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 455778888865 58999998 652 3589999999999999998 99999999999999999999999988
Q ss_pred HcCCCCeEEEEEEeCc
Q psy3835 1304 LAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1304 l~~~~~~v~L~v~r~~ 1319 (1659)
+...+..+.|+|.|+.
T Consensus 87 ~~~~g~~v~l~v~R~~ 102 (108)
T 1q7x_A 87 LRNTGQVVHLLLEKGQ 102 (108)
T ss_dssp HHHTTSEEEEEEECCC
T ss_pred HHcCCCeEEEEEEeCC
Confidence 8888899999999874
No 283
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.87 E-value=5.7e-09 Score=107.77 Aligned_cols=86 Identities=30% Similarity=0.388 Sum_probs=74.0
Q ss_pred CCeEEEEEecCC----CCceEEEEecC--------------CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCH
Q psy3835 1127 GELRRVHIDKSV----EPLGIQIQCLD--------------SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATY 1188 (1659)
Q Consensus 1127 ~~~~~v~l~k~~----~~lG~sl~~~~--------------~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~ 1188 (1659)
...+.|.|.+.+ .+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++
T Consensus 22 ~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~ 101 (139)
T 2vz5_A 22 SMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTH 101 (139)
T ss_dssp CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCH
T ss_pred CceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCH
Confidence 466888888853 48999998752 369999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-CCCeEEEEEEecCCc
Q psy3835 1189 QLAASVLRQ-CGNSITMLVQYSPDK 1212 (1659)
Q Consensus 1189 ~~~~~~l~~-~~~~v~l~v~r~~~~ 1212 (1659)
.++..+++. .|..|.|.|.|++..
T Consensus 102 ~~~~~~l~~~~g~~v~l~v~R~g~~ 126 (139)
T 2vz5_A 102 DQARKRLTKRSEEVVRLLVTRQSLQ 126 (139)
T ss_dssp HHHHHHHCCTTCSEEEEEEEECC--
T ss_pred HHHHHHHHhCCCCEEEEEEEECCEE
Confidence 999999986 568899999998763
No 284
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=4.2e-09 Score=102.86 Aligned_cols=83 Identities=28% Similarity=0.400 Sum_probs=71.2
Q ss_pred CCeEEEEecCCcCccCeEEecCCCc--c-eEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcC-----
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNAV--G-IYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK----- 1306 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~~--g-i~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~----- 1306 (1659)
..+.|.+.+.. .+|||+|.++.+. + ++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+.
T Consensus 6 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 84 (103)
T 1ufx_A 6 SGTLVRVKKSA-ATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTK 84 (103)
T ss_dssp SSEEEEEECCS-SSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCS
T ss_pred ceEEEEEEcCC-CcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccC
Confidence 35778887655 5999999987553 3 5999999999999988 99999999999999999999999999876
Q ss_pred CCCeEEEEEEeCc
Q psy3835 1307 PADKVTVLAQYSV 1319 (1659)
Q Consensus 1307 ~~~~v~L~v~r~~ 1319 (1659)
.++.+.|.|.|..
T Consensus 85 ~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 85 DRDYIDFLVTEFN 97 (103)
T ss_dssp SCSEEEEEECCCC
T ss_pred CCCeEEEEEEEcc
Confidence 5778899888753
No 285
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.87 E-value=6.7e-09 Score=103.62 Aligned_cols=87 Identities=24% Similarity=0.292 Sum_probs=77.5
Q ss_pred CCCCeEEEEecCCcCccCeEEecCC-CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 1312 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~-~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~ 1312 (1659)
...++.+.+.+.....|||++.++. ..|++|..|.+||||+++||++||+|++|||+++.++++.++...+...+..+.
T Consensus 11 ~ldp~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 90 (114)
T 2edz_A 11 TFNPRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVT 90 (114)
T ss_dssp CCCCEEEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEE
T ss_pred cCCCEEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 3478999999988889999998653 469999999999999999999999999999999999999999888877789999
Q ss_pred EEEEeCcc
Q psy3835 1313 VLAQYSVE 1320 (1659)
Q Consensus 1313 L~v~r~~~ 1320 (1659)
|+|.|+..
T Consensus 91 l~v~R~~~ 98 (114)
T 2edz_A 91 LLVLDGDS 98 (114)
T ss_dssp EEEECHHH
T ss_pred EEEEECCc
Confidence 99999754
No 286
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.86 E-value=3.4e-09 Score=101.78 Aligned_cols=82 Identities=23% Similarity=0.285 Sum_probs=70.7
Q ss_pred EEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEE
Q psy3835 1239 FLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQ 1316 (1659)
Q Consensus 1239 ~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~ 1316 (1659)
.+.+......+|||++.++.. .|++|..|.++|||+++||++||+|++|||+++.++++.++...+......+.|+|.
T Consensus 7 ~~~~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~ 86 (94)
T 1vb7_A 7 GLTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLD 86 (94)
T ss_dssp CEEEEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEE
T ss_pred EEEEEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEE
Confidence 355555566799999987543 489999999999999999999999999999999999999988888877799999999
Q ss_pred eCcc
Q psy3835 1317 YSVE 1320 (1659)
Q Consensus 1317 r~~~ 1320 (1659)
|+..
T Consensus 87 R~g~ 90 (94)
T 1vb7_A 87 RSSG 90 (94)
T ss_dssp CCCC
T ss_pred ECCc
Confidence 9753
No 287
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=2.5e-09 Score=104.60 Aligned_cols=83 Identities=17% Similarity=0.264 Sum_probs=71.9
Q ss_pred CCeEEEEecCCcCccCeEEecCC--CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC--CCe
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP--ADK 1310 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~--~~~ 1310 (1659)
..+.+.|.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|... +..
T Consensus 9 ~~~~v~l~~~~-~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~ 87 (103)
T 1uep_A 9 KELDVHLRRME-SGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQ 87 (103)
T ss_dssp EEECCEEESSS-SSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTE
T ss_pred eEEEEEEEeCC-CccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCc
Confidence 34557788754 58999999864 3689999999999999999 999999999999999999999999888765 789
Q ss_pred EEEEEEeCc
Q psy3835 1311 VTVLAQYSV 1319 (1659)
Q Consensus 1311 v~L~v~r~~ 1319 (1659)
|.|+|.|+.
T Consensus 88 v~l~v~R~~ 96 (103)
T 1uep_A 88 VNLTVRRKV 96 (103)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999999874
No 288
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=1.6e-08 Score=102.33 Aligned_cols=83 Identities=17% Similarity=0.197 Sum_probs=72.0
Q ss_pred CCeEEEEecCCcCccCeEEecCC--CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcC--CCCe
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK--PADK 1310 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~--~~~~ 1310 (1659)
..+.+.|.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|.. .+..
T Consensus 19 ~~~~v~l~~~~-~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~ 97 (123)
T 1ueq_A 19 TFLSTTLKKSN-MGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQS 97 (123)
T ss_dssp EEEEEEEECCT-TSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCE
T ss_pred cEEEEEEEeCC-CceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 34557777765 48999999764 3579999999999999999 99999999999999999999999998887 4789
Q ss_pred EEEEEEeCc
Q psy3835 1311 VTVLAQYSV 1319 (1659)
Q Consensus 1311 v~L~v~r~~ 1319 (1659)
|.|+|.|+.
T Consensus 98 v~l~v~R~~ 106 (123)
T 1ueq_A 98 VNLVLCRGY 106 (123)
T ss_dssp EEEEEEESC
T ss_pred EEEEEEeCC
Confidence 999999874
No 289
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=1.1e-08 Score=97.06 Aligned_cols=75 Identities=20% Similarity=0.354 Sum_probs=64.8
Q ss_pred eEEEEEecC--CCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEE
Q psy3835 1129 LRRVHIDKS--VEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLV 1206 (1659)
Q Consensus 1129 ~~~v~l~k~--~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 1206 (1659)
.+.+.+.+. ..+|||.+.+ | +|..|.++|||+++||++||+|++|||.++.+.++.++..+++..+..+.|+|
T Consensus 12 ~~~~~i~~~~~~~~lG~~~~~----G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v 86 (90)
T 1y7n_A 12 VTTVLIRRPDLRYQLGFSVQN----G-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKT 86 (90)
T ss_dssp CEEEEEEESSTTSCCCEEEET----T-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEE
T ss_pred cceEEEEeCCCccccCeEecC----C-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 344444443 5789999864 3 99999999999999999999999999999999999999999998888999998
Q ss_pred Ee
Q psy3835 1207 QY 1208 (1659)
Q Consensus 1207 ~r 1208 (1659)
.+
T Consensus 87 ~p 88 (90)
T 1y7n_A 87 MP 88 (90)
T ss_dssp EC
T ss_pred EE
Confidence 74
No 290
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.86 E-value=7.8e-09 Score=104.15 Aligned_cols=82 Identities=18% Similarity=0.189 Sum_probs=74.9
Q ss_pred CCeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHh--CCCeEE
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQ--CGNSIT 1203 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~ 1203 (1659)
...+.+.+.+...+|||++.+. ..+++|..|.++|||+++| |++||+|++|||.++.+.++.+++.+++. .|..|+
T Consensus 26 ~~~~~~~l~k~~~glG~~i~~~-~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~ 104 (126)
T 1wif_A 26 NKVIQTKLTVGNLGLGLVVIQN-GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQ 104 (126)
T ss_dssp CCEEEEEEECCTTCCCCCEEEE-TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEE
T ss_pred CceEEEEEecCCceEeEEEEcC-CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEE
Confidence 4677888999999999999874 4689999999999999999 99999999999999999999999999987 578999
Q ss_pred EEEEec
Q psy3835 1204 MLVQYS 1209 (1659)
Q Consensus 1204 l~v~r~ 1209 (1659)
|+|.|+
T Consensus 105 l~V~R~ 110 (126)
T 1wif_A 105 IKAYRG 110 (126)
T ss_dssp EEEESS
T ss_pred EEEEEC
Confidence 999987
No 291
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.85 E-value=8.3e-09 Score=97.77 Aligned_cols=81 Identities=25% Similarity=0.304 Sum_probs=66.9
Q ss_pred CCeEEEEecCCcCccCeEEecCC-CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcC--CCCeEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK--PADKVT 1312 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~-~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~--~~~~v~ 1312 (1659)
..+.+.|.+... +|||++.+.. ..|++|..| ++|||+ +||++||+|++|||+++.++++.++...+.. .+..+.
T Consensus 3 ~~~~v~l~k~~~-g~G~~~~~~~~~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~ 79 (88)
T 3bpu_A 3 ELITVHIVKGPM-GFGFTIADSPGGGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVT 79 (88)
T ss_dssp EEEEEEEECBTT-BSSCEEEECTTSSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEE
T ss_pred cEEEEEEEcCCC-ceeEEEEecCCCCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEE
Confidence 346678888664 8999998763 368999987 999999 9999999999999999999998888888864 578999
Q ss_pred EEEEeCc
Q psy3835 1313 VLAQYSV 1319 (1659)
Q Consensus 1313 L~v~r~~ 1319 (1659)
|+|.|+.
T Consensus 80 l~v~R~g 86 (88)
T 3bpu_A 80 LLVQRQT 86 (88)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9998863
No 292
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.85 E-value=7.8e-09 Score=105.45 Aligned_cols=87 Identities=22% Similarity=0.303 Sum_probs=76.4
Q ss_pred CCCeEEEEEecCCCCceEEEEecC-CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhC-CCeEE
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLD-SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQC-GNSIT 1203 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~~v~ 1203 (1659)
...++.|.+.+...+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.++..+++.. +..+.
T Consensus 7 ~~~~r~v~l~~~~~g~G~~l~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 86 (128)
T 2kjd_A 7 MLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKL 86 (128)
T ss_dssp TCCCEEEEEECCSSSCCEEEEECSSSCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEE
T ss_pred CCCcEEEEEecCCCcccEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEE
Confidence 346789999999999999999874 4599999999999999999999999999999999999999999999876 45677
Q ss_pred EEEEecCCc
Q psy3835 1204 MLVQYSPDK 1212 (1659)
Q Consensus 1204 l~v~r~~~~ 1212 (1659)
|.|.|++..
T Consensus 87 l~v~R~g~~ 95 (128)
T 2kjd_A 87 LVVDRETDE 95 (128)
T ss_dssp EEECHHHHH
T ss_pred EEEEeCCcc
Confidence 888887653
No 293
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.85 E-value=7e-09 Score=101.48 Aligned_cols=81 Identities=26% Similarity=0.344 Sum_probs=70.4
Q ss_pred CCeEEEEecCCcCccCeEEecCC----------CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHc
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGN----------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA 1305 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~----------~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~ 1305 (1659)
....+.+.+.+ +|||++.++. ..|++|..|.++|||++ ||++||+|++|||+++.++++.+++..+.
T Consensus 11 ~~~~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~ 87 (103)
T 1n7t_A 11 QEIRVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK 87 (103)
T ss_dssp CCEEEEEECSS--CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred EEEEEEEccCC--CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhh
Confidence 34556777654 7999999853 35899999999999999 99999999999999999999999998888
Q ss_pred CCCCeEEEEEEeCc
Q psy3835 1306 KPADKVTVLAQYSV 1319 (1659)
Q Consensus 1306 ~~~~~v~L~v~r~~ 1319 (1659)
..+..+.|+|.|+.
T Consensus 88 ~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 88 TFQNTVELIIVREV 101 (103)
T ss_dssp HCCSEEEEEEECCC
T ss_pred cCCCeEEEEEEecC
Confidence 78899999999863
No 294
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.85 E-value=7.3e-09 Score=100.34 Aligned_cols=86 Identities=21% Similarity=0.357 Sum_probs=72.0
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC-cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCC-eE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA-VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPAD-KV 1311 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~-~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~-~v 1311 (1659)
...++.+.+.+... +|||++.++.. .|++|..|.++|||+++||++||+|++|||+++.++++.++...+....+ .+
T Consensus 7 ~~~~~~~~l~~~~~-g~G~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 85 (98)
T 2jxo_A 7 MLRPRLCTMKKGPS-GYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK 85 (98)
T ss_dssp SSCCEEEEEECTTT-CCCEEEECCCSSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEE
T ss_pred cCCcEEEEEEeCCC-cccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 34568888888764 89999987653 48999999999999999999999999999999999989998888877654 45
Q ss_pred EEEEEeCcc
Q psy3835 1312 TVLAQYSVE 1320 (1659)
Q Consensus 1312 ~L~v~r~~~ 1320 (1659)
.|+|.|+..
T Consensus 86 ~l~v~R~g~ 94 (98)
T 2jxo_A 86 LLVVDRETD 94 (98)
T ss_dssp EEECCHHHH
T ss_pred EEEEECCch
Confidence 588877643
No 295
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.85 E-value=1e-08 Score=102.06 Aligned_cols=85 Identities=24% Similarity=0.307 Sum_probs=73.9
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCCc--ceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNAV--GIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADK 1310 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~~--gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~ 1310 (1659)
...++.|.+.+.....|||++.++... +++|..|.+||||+++| |++||+|++|||.++.+.+..++...+...++.
T Consensus 22 ~~~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~ 101 (114)
T 2gzv_A 22 SMVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 101 (114)
T ss_dssp CCCCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred cCCCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 456788999998887899999987543 79999999999999999 999999999999999988999988888777778
Q ss_pred EEEEEEeC
Q psy3835 1311 VTVLAQYS 1318 (1659)
Q Consensus 1311 v~L~v~r~ 1318 (1659)
+.|+|.+.
T Consensus 102 v~l~v~~~ 109 (114)
T 2gzv_A 102 VTIHYNKL 109 (114)
T ss_dssp EEEEEECC
T ss_pred EEEEEEec
Confidence 88888653
No 296
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.85 E-value=5.7e-09 Score=102.30 Aligned_cols=83 Identities=16% Similarity=0.255 Sum_probs=71.9
Q ss_pred CCCCCeEEEEecCCcCccCeEEecC---------CCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHH
Q psy3835 1233 GSGEPRFLMIETRKCSNLGISLVGG---------NAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYE 1303 (1659)
Q Consensus 1233 ~~~~~~~v~l~k~~~~~lGi~l~gg---------~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~ 1303 (1659)
.+..++.+.+.+....+|||++.+. ...|++|..|.++|||+++||++||+|++|||+++.++++.++...
T Consensus 12 s~~~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~ 91 (104)
T 2z17_A 12 SWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDL 91 (104)
T ss_dssp CCSCCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHH
T ss_pred CCCcceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHH
Confidence 3456788889998777999999972 2358999999999999999999999999999999999999999988
Q ss_pred HcCCCCeEEEEE
Q psy3835 1304 LAKPADKVTVLA 1315 (1659)
Q Consensus 1304 l~~~~~~v~L~v 1315 (1659)
+...++.+.|+|
T Consensus 92 l~~~~~~v~l~v 103 (104)
T 2z17_A 92 IRSSGNLLTIET 103 (104)
T ss_dssp HHHTTTEEEEEC
T ss_pred HHhCCCcEEEEE
Confidence 887777787765
No 297
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.85 E-value=1.2e-08 Score=101.39 Aligned_cols=85 Identities=26% Similarity=0.432 Sum_probs=71.7
Q ss_pred CeEEEEecCCcCccCeEEecCCC-----cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC--C
Q psy3835 1237 PRFLMIETRKCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP--A 1308 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~gg~~-----~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~--~ 1308 (1659)
.+.+.+.+.. .+|||++.++.. .|++|..|.+||||+++| |++||+|++|||+++.++++.++...+... +
T Consensus 12 ~~~~~l~~~~-~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g 90 (111)
T 2koj_A 12 RLNIQLKKGT-EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKME 90 (111)
T ss_dssp EEEEEEECBT-TBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCS
T ss_pred EEEEEEEECC-CccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 3456666655 489999987643 589999999999999998 999999999999999999999988888753 7
Q ss_pred CeEEEEEEeCcccc
Q psy3835 1309 DKVTVLAQYSVERY 1322 (1659)
Q Consensus 1309 ~~v~L~v~r~~~~~ 1322 (1659)
..+.|+|.|+...+
T Consensus 91 ~~v~l~v~R~~~~~ 104 (111)
T 2koj_A 91 GTVSLLVFRQEEAF 104 (111)
T ss_dssp SEEEEEEEECCCCC
T ss_pred CeEEEEEEeCCCCc
Confidence 89999999976543
No 298
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.84 E-value=1.1e-08 Score=100.47 Aligned_cols=80 Identities=23% Similarity=0.262 Sum_probs=69.8
Q ss_pred CCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe-EEEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK-VTVL 1314 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~-v~L~ 1314 (1659)
.++.|.|.+.. .+|||++.+. .|++|..|.+||||+++||++||+|++|||.++.+++..++...+...++. +.|+
T Consensus 23 ~~r~v~l~k~~-~~~G~~l~~~--~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~ 99 (109)
T 2vsv_A 23 MPRSIRFTAEE-GDLGFTLRGN--APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMK 99 (109)
T ss_dssp SCEEEEECCGG-GCCCEEEESS--SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEE
T ss_pred CCEEEEEEeCC-CceeEEEeCC--CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEE
Confidence 56889998864 5999998753 589999999999999999999999999999999999988888888776664 9999
Q ss_pred EEeC
Q psy3835 1315 AQYS 1318 (1659)
Q Consensus 1315 v~r~ 1318 (1659)
|.+.
T Consensus 100 V~~~ 103 (109)
T 2vsv_A 100 VVSL 103 (109)
T ss_dssp EESC
T ss_pred EEEC
Confidence 9875
No 299
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.84 E-value=1.8e-08 Score=122.11 Aligned_cols=88 Identities=28% Similarity=0.431 Sum_probs=78.6
Q ss_pred CCeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh--CCCeEEE
Q psy3835 1127 GELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ--CGNSITM 1204 (1659)
Q Consensus 1127 ~~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l 1204 (1659)
..++.|.+.+++ +|||++.++...|++|..|.+||||+++||++||+|++|||.++.++++.+++.+++. +|..|+|
T Consensus 8 ~~~~~v~~~k~~-~lG~~i~gg~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l 86 (391)
T 3tsz_A 8 PSMKLVKFRKGD-SVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 86 (391)
T ss_dssp -CEEEEEEECCS-SCCEEEEEETTTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEE
T ss_pred CCcEEEEeecCC-ceeEEEEecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEE
Confidence 356778887775 6999999988899999999999999999999999999999999999999999999985 7889999
Q ss_pred EEEecCCcccc
Q psy3835 1205 LVQYSPDKYHE 1215 (1659)
Q Consensus 1205 ~v~r~~~~~~~ 1215 (1659)
+|.|++..+..
T Consensus 87 ~v~r~~~~~~~ 97 (391)
T 3tsz_A 87 LAQKKKDVYRR 97 (391)
T ss_dssp EEEECHHHHGG
T ss_pred EEeeCCccccc
Confidence 99998875543
No 300
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.83 E-value=1e-08 Score=112.28 Aligned_cols=86 Identities=23% Similarity=0.372 Sum_probs=76.8
Q ss_pred CCCCeEEEEecCCcCccCeEEecCC--CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
...++.|.+.+.+..+|||++.++. ..|++|..|.+||||+++||++||+|++|||.++.++++.+++..+.. ++.+
T Consensus 82 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v 160 (192)
T 3k1r_A 82 SRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT-EKTV 160 (192)
T ss_dssp CSSCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS-SSEE
T ss_pred CCceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC-CCeE
Confidence 3567889999987789999998763 358999999999999999999999999999999999999999998877 8999
Q ss_pred EEEEEeCcc
Q psy3835 1312 TVLAQYSVE 1320 (1659)
Q Consensus 1312 ~L~v~r~~~ 1320 (1659)
.|+|.|+..
T Consensus 161 ~l~v~r~g~ 169 (192)
T 3k1r_A 161 SIKVRHIGL 169 (192)
T ss_dssp EEEEEECCE
T ss_pred EEEEEECCc
Confidence 999999753
No 301
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.83 E-value=1.7e-08 Score=100.76 Aligned_cols=84 Identities=30% Similarity=0.478 Sum_probs=72.5
Q ss_pred CCeEEEEEecC-CCCceEEEEecC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCLD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
..++.+.+.+. ..+|||+|.++. ..|++|..|.+++||+++||++||+|++|||.++.++++.++...++.. ..+.
T Consensus 14 ~~~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~v~ 92 (114)
T 1x5n_A 14 NKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RSLT 92 (114)
T ss_dssp CSSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC-SSEE
T ss_pred CCcEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CeEE
Confidence 45677877665 689999999763 4699999999999999999999999999999999999988888888765 6899
Q ss_pred EEEEec-CC
Q psy3835 1204 MLVQYS-PD 1211 (1659)
Q Consensus 1204 l~v~r~-~~ 1211 (1659)
|.|.|+ +.
T Consensus 93 l~v~r~~g~ 101 (114)
T 1x5n_A 93 ISIVAAAGR 101 (114)
T ss_dssp EEECSSTTT
T ss_pred EEEEcCCCC
Confidence 999887 54
No 302
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.82 E-value=8.4e-09 Score=100.90 Aligned_cols=83 Identities=19% Similarity=0.278 Sum_probs=70.9
Q ss_pred CCeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
....|.+. ...+|||++.++.+ .+++|..|.++|||+++||++||+|++|||+++.++++.++...+...+..+.|
T Consensus 5 ~~~~v~l~--~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 82 (103)
T 1wf7_A 5 SSGSVSLV--GPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNM 82 (103)
T ss_dssp CCEEEEEE--SSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEE
T ss_pred CEEEEEEe--CCCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 34556666 34589999998654 479999999999999999999999999999999999999988888777889999
Q ss_pred EEEeCcc
Q psy3835 1314 LAQYSVE 1320 (1659)
Q Consensus 1314 ~v~r~~~ 1320 (1659)
+|.|+..
T Consensus 83 ~v~R~g~ 89 (103)
T 1wf7_A 83 TLQRASA 89 (103)
T ss_dssp EECCCSC
T ss_pred EEEeCCC
Confidence 9988754
No 303
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.81 E-value=1.7e-08 Score=97.45 Aligned_cols=80 Identities=25% Similarity=0.358 Sum_probs=69.1
Q ss_pred EEEEecCCcCccCeEEecCC------CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1239 FLMIETRKCSNLGISLVGGN------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1239 ~v~l~k~~~~~lGi~l~gg~------~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
.+.+.+.. .+|||++.++. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+..+
T Consensus 7 ~v~l~~~~-~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 85 (97)
T 2iwn_A 7 DVELTKNV-QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTV 85 (97)
T ss_dssp EEEEECBT-TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEE
T ss_pred EEEEecCC-CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 35565544 48999998762 4689999999999999999 9999999999999999999999888888888999
Q ss_pred EEEEEeCc
Q psy3835 1312 TVLAQYSV 1319 (1659)
Q Consensus 1312 ~L~v~r~~ 1319 (1659)
.|+|.|+.
T Consensus 86 ~l~v~r~g 93 (97)
T 2iwn_A 86 LLTLMRRG 93 (97)
T ss_dssp EEEEEEEE
T ss_pred EEEEEeCC
Confidence 99998864
No 304
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.81 E-value=1.2e-08 Score=104.20 Aligned_cols=82 Identities=17% Similarity=0.163 Sum_probs=70.7
Q ss_pred CeEEEEecCCcCccCeEEecCC--CcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC--CCeE
Q psy3835 1237 PRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP--ADKV 1311 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~--~~~v 1311 (1659)
...+.|.+... +|||++.++. ..|++|..|.+||+|+++| |++||+|++|||+++.++++.+++.+|... +..|
T Consensus 19 ~~~v~l~~~~~-g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v 97 (129)
T 2kpk_A 19 FIHTKLRKSSR-GFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASV 97 (129)
T ss_dssp EEEEEEEECSS-CCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEE
T ss_pred EEEEEEEECCC-cccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 34567777554 8999999853 3479999999999999998 999999999999999999999998888765 6789
Q ss_pred EEEEEeCc
Q psy3835 1312 TVLAQYSV 1319 (1659)
Q Consensus 1312 ~L~v~r~~ 1319 (1659)
.|+|.|+.
T Consensus 98 ~l~v~R~~ 105 (129)
T 2kpk_A 98 DLELCRGY 105 (129)
T ss_dssp EEEEEECS
T ss_pred EEEEEeCC
Confidence 99999974
No 305
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=8e-09 Score=100.41 Aligned_cols=84 Identities=20% Similarity=0.338 Sum_probs=71.4
Q ss_pred CCCeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhc-CCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~-gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
...+.+.+......+|||++.++.+ .+++|..|.++|||+++ ||++||+|++|||+++.++ +.+++..++..+..+
T Consensus 8 ~~~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v 86 (100)
T 2edp_A 8 GSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRIL 86 (100)
T ss_dssp CCCEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSC
T ss_pred CCcEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeE
Confidence 4456677777666799999987643 47999999999999998 9999999999999999987 777888887778899
Q ss_pred EEEEEeCc
Q psy3835 1312 TVLAQYSV 1319 (1659)
Q Consensus 1312 ~L~v~r~~ 1319 (1659)
.|+|.|+.
T Consensus 87 ~l~v~R~~ 94 (100)
T 2edp_A 87 KLIVRRRN 94 (100)
T ss_dssp EEEEEECC
T ss_pred EEEEEeCC
Confidence 99999874
No 306
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.80 E-value=1.3e-08 Score=99.93 Aligned_cols=81 Identities=16% Similarity=0.153 Sum_probs=69.3
Q ss_pred CCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCC--CCeEEE
Q psy3835 1236 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKP--ADKVTV 1313 (1659)
Q Consensus 1236 ~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~--~~~v~L 1313 (1659)
..+.|.|.|... +|||+|.++ ..|.+|.+|.+ +|..+||++||+|++|||+++.+++|.+++.+|+.. +..|+|
T Consensus 12 ~~~~V~L~Kg~~-G~GFsI~~~-~~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L 87 (113)
T 3soe_A 12 LLVTIPLIKGPK-GFGFAIADS-PTGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPL 87 (113)
T ss_dssp EEEEEEEECBTT-BSSEEEEEE-TTEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEEEEECCC-cccEEEeCC-CCCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEE
Confidence 456788888754 999999764 35889999988 467799999999999999999999999999999864 679999
Q ss_pred EEEeCcc
Q psy3835 1314 LAQYSVE 1320 (1659)
Q Consensus 1314 ~v~r~~~ 1320 (1659)
+|.|+..
T Consensus 88 ~V~R~g~ 94 (113)
T 3soe_A 88 LILRGGP 94 (113)
T ss_dssp EEEESSC
T ss_pred EEEECCc
Confidence 9999854
No 307
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.80 E-value=2.1e-08 Score=95.37 Aligned_cols=78 Identities=27% Similarity=0.336 Sum_probs=69.3
Q ss_pred EEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh---CCCeEEEEE
Q psy3835 1130 RRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ---CGNSITMLV 1206 (1659)
Q Consensus 1130 ~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~---~~~~v~l~v 1206 (1659)
..+.+.+...++||.+... ..+++|..|.+||||+++||++||+|++|||.++...++.++...++. .+..|.|+|
T Consensus 19 ~~l~l~~~~~g~G~~l~~~-~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV 97 (101)
T 3qik_A 19 KRLLILPQEEDYGFDIEEK-NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLV 97 (101)
T ss_dssp EEEEECCCSSSSSEEEEEE-TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEeCCCcccEEEEcc-CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEE
Confidence 5677888888999999874 568999999999999999999999999999999988889999988886 488999998
Q ss_pred Ee
Q psy3835 1207 QY 1208 (1659)
Q Consensus 1207 ~r 1208 (1659)
..
T Consensus 98 ~~ 99 (101)
T 3qik_A 98 AT 99 (101)
T ss_dssp EC
T ss_pred ec
Confidence 63
No 308
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.29 E-value=5.2e-10 Score=110.99 Aligned_cols=83 Identities=31% Similarity=0.417 Sum_probs=72.3
Q ss_pred CCCeEEEEEecC-CCCceEEEEecC--CCcEEEEEeCCCChhhh-cCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCe
Q psy3835 1126 PGELRRVHIDKS-VEPLGIQIQCLD--SGGVFVSTVSEHSLASQ-VGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNS 1201 (1659)
Q Consensus 1126 ~~~~~~v~l~k~-~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~-~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 1201 (1659)
...++.|.+.+. ..+|||++.++. ..|++|..|.++|||++ +||++||+|++|||.++.+.++.++..+++.++..
T Consensus 25 ~~~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~ 104 (112)
T 2lob_A 25 FQGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 104 (112)
Confidence 346678888887 489999999873 35899999999999999 89999999999999999999999999999888777
Q ss_pred EEEEEEe
Q psy3835 1202 ITMLVQY 1208 (1659)
Q Consensus 1202 v~l~v~r 1208 (1659)
++|+|.+
T Consensus 105 v~l~V~~ 111 (112)
T 2lob_A 105 IEFEVVY 111 (112)
Confidence 8887753
No 309
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.80 E-value=1e-08 Score=99.53 Aligned_cols=80 Identities=28% Similarity=0.325 Sum_probs=68.2
Q ss_pred EEEecCCcCccCeEEecCCC---------cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe
Q psy3835 1240 LMIETRKCSNLGISLVGGNA---------VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK 1310 (1659)
Q Consensus 1240 v~l~k~~~~~lGi~l~gg~~---------~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~ 1310 (1659)
+.+.+. ..+|||++.++.. .|++|..|.++|||+++||++||+|++|||.++.++++.++...+...+..
T Consensus 6 v~l~~~-~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 84 (99)
T 3khf_A 6 IVIHSS-GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKSGNK 84 (99)
T ss_dssp EEEEC--CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred EEEEeC-CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCE
Confidence 556664 4599999985421 277999999999999999999999999999999999999999998888999
Q ss_pred EEEEEEeCcc
Q psy3835 1311 VTVLAQYSVE 1320 (1659)
Q Consensus 1311 v~L~v~r~~~ 1320 (1659)
+.|+|.|+..
T Consensus 85 v~l~v~r~~~ 94 (99)
T 3khf_A 85 ISLRTTALEN 94 (99)
T ss_dssp EEEEEECSCS
T ss_pred EEEEEEECCC
Confidence 9999998643
No 310
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=98.80 E-value=6.4e-10 Score=129.95 Aligned_cols=173 Identities=7% Similarity=0.035 Sum_probs=114.7
Q ss_pred CCCcEEEECCCh---HHHHHHHhhhCCCcccccccc-eecCChHHHHHhccCCceEEEE-EeCCeeeee-cHHHHHHHHH
Q psy3835 1473 VLRPVILVGALS---DTVTDKLLQDFPDKFVRCAPE-IMHCPQAAMEKGLADNLFVDYR-KKGAYFECT-SVAAVKDACD 1546 (1659)
Q Consensus 1473 ~~RpvVl~Gp~g---~~l~~~Ll~~~p~~f~~~v~~-Ttrvs~~~f~~~i~~~~flE~~-~~~g~~YGt-s~~~V~~v~~ 1546 (1659)
.+..|||+||+| +|+.++|...++..+ .+|+. ++|.....|..++.. |.+|. ++.+++||+ ....|+..++
T Consensus 32 ~~~livl~G~sGsGKSTla~~L~~~~~~~~-~~Is~D~~R~~~~~~~~~~~~--~~~~a~~~~~~~~~~~~~~~v~~~l~ 108 (287)
T 1gvn_B 32 SPTAFLLGGQPGSGKTSLRSAIFEETQGNV-IVIDNDTFKQQHPNFDELVKL--YEKDVVKHVTPYSNRMTEAIISRLSD 108 (287)
T ss_dssp SCEEEEEECCTTSCTHHHHHHHHHHTTTCC-EEECTHHHHTTSTTHHHHHHH--HGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCCe-EEEechHhHHhchhhHHHHHH--ccchhhhhhhHHHHHHHHHHHHHHHh
Confidence 456789999998 999999998876433 33444 777666666555443 66665 566899999 4678899999
Q ss_pred cCCCeEEEEcChhHHH---HHH----hcCCc-cEEEEEecCCHHHH--HHHHhhhc--cccCCCCc--ccHHHHHHHHHH
Q psy3835 1547 KNNAHVILDVSLAGVE---RLH----RQHVY-PIVLLIKFKSTKQI--KEIKEIRD--GRYSSLDK--VTAKAAKEMYEH 1612 (1659)
Q Consensus 1547 ~~gk~~iLdi~~~~~~---~l~----~~~~~-pivIfI~pps~~~l--~~~~~~~~--~r~~~~~~--~~~~~~~~~~~~ 1612 (1659)
. |+.||||+++++.. .++ ..++. .+++|+.||+...+ .+|+..+. +.+..|.. .+.+.+..++..
T Consensus 109 ~-g~~vIld~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~p~~~~~l~~~~Rl~~R~~~g~l~~R~~~~e~~~~i~~rl~~ 187 (287)
T 1gvn_B 109 Q-GYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPT 187 (287)
T ss_dssp H-TCCEEECCCCCCSHHHHHHHHHHHTTTCEEEEEEECCCHHHHHHHHHHHHHHHHHHCTTTCCCCCHHHHHHHHHHHHH
T ss_pred c-CCeEEEECCCCCHHHHHHHHHHHHhCCCcEEEEEEECCHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence 9 99999999998865 432 22222 25677778887654 45543110 00112322 233445555555
Q ss_pred HHHHHHHcCCcceEEEeCCCCH--------HHHHHHHHHHHHhhcCC
Q psy3835 1613 GLKIECEHKHYISAVIPAGVNI--------AYMCTQIQTAVELEQSK 1651 (1659)
Q Consensus 1613 a~~~e~~~~~~fd~vi~n~~~~--------~~~~~~l~~ii~~~~~~ 1651 (1659)
+.. |......||++++|| +. +.+...+.+||..+..+
T Consensus 188 a~~-el~~~~~~d~v~v~d-~~g~~ly~~~~~~~~~~~~ii~~e~~r 232 (287)
T 1gvn_B 188 NLE-TLHKTGLFSDIRLYN-REGVKLYSSLETPSISPKETLEKELNR 232 (287)
T ss_dssp HHH-HHHHHTCCSCEEEEC-TTCCEEEETTTCTTSCHHHHHHHHHSC
T ss_pred HHH-HHHcCCCCCeEEEEe-CCCCEeeccCCCCCcCHHHHHHHHHcC
Confidence 543 455567899999999 64 67777888899887654
No 311
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=4.6e-09 Score=101.24 Aligned_cols=82 Identities=20% Similarity=0.257 Sum_probs=72.5
Q ss_pred CCCeEEEEecCCcC-ccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEE
Q psy3835 1235 GEPRFLMIETRKCS-NLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 1313 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~-~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L 1313 (1659)
+.++.+.|.+.... +|||.+.+ ..|++|..|.++|||+ +||++||+|++|||+++.++++.+++..+...+..+.|
T Consensus 7 ~~~~~v~l~~~~~~~~~G~~l~~--~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l 83 (96)
T 2edv_A 7 GVRHTVKIDKDTLLQDYGFHISE--SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSI 83 (96)
T ss_dssp CEEEEEEECCCSSSCSCSBCCCS--SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEE
T ss_pred CccEEEEEEECCCCCcccEEEec--CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 45677888887743 79999986 4699999999999996 99999999999999999999999999888878999999
Q ss_pred EEEeCc
Q psy3835 1314 LAQYSV 1319 (1659)
Q Consensus 1314 ~v~r~~ 1319 (1659)
+|.|+.
T Consensus 84 ~v~R~~ 89 (96)
T 2edv_A 84 TVVRCT 89 (96)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999975
No 312
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.80 E-value=2e-08 Score=98.38 Aligned_cols=80 Identities=33% Similarity=0.425 Sum_probs=67.1
Q ss_pred EEEEEecCC----CCceEEEEecC--------------CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHH
Q psy3835 1130 RRVHIDKSV----EPLGIQIQCLD--------------SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLA 1191 (1659)
Q Consensus 1130 ~~v~l~k~~----~~lG~sl~~~~--------------~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~ 1191 (1659)
..+.+.+.. .+|||++.++. ..|++|..|.++|||+++||++||.|++|||.++.++++.++
T Consensus 6 ~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 6 QRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp EEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH
Confidence 345555542 36999999652 358999999999999999999999999999999999999999
Q ss_pred HHHHHh-CCCeEEEEEEec
Q psy3835 1192 ASVLRQ-CGNSITMLVQYS 1209 (1659)
Q Consensus 1192 ~~~l~~-~~~~v~l~v~r~ 1209 (1659)
...++. .+..+.|+|.|.
T Consensus 86 ~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 86 RKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHTCTTCSEEEEEEEEC
T ss_pred HHHHHhCCCCEEEEEEEcC
Confidence 999975 467899998873
No 313
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.79 E-value=3.3e-08 Score=98.19 Aligned_cols=84 Identities=27% Similarity=0.336 Sum_probs=74.1
Q ss_pred eEEEEEecC-CCCceEEEEecC-CCcEEEEEeCCCChhhhcCC-CCCCEEEeeCCeecCCCCHHHHHHHHHhC-CCeEEE
Q psy3835 1129 LRRVHIDKS-VEPLGIQIQCLD-SGGVFVSTVSEHSLASQVGL-QVGDQLLEVCGINMRSATYQLAASVLRQC-GNSITM 1204 (1659)
Q Consensus 1129 ~~~v~l~k~-~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~GL-~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~~v~l 1204 (1659)
.+.|.+.++ ..+|||++.+.. ..|++|..|.++|||+++|| ++||.|++|||.++.++++.++..+++.. +..+.|
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l 81 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVV 81 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEE
T ss_pred EEEEEEEcCCCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEE
Confidence 357888887 589999998874 46899999999999999997 99999999999999999999999998864 689999
Q ss_pred EEEecCCc
Q psy3835 1205 LVQYSPDK 1212 (1659)
Q Consensus 1205 ~v~r~~~~ 1212 (1659)
.|.|++..
T Consensus 82 ~v~R~g~~ 89 (112)
T 1qau_A 82 LILRGPEG 89 (112)
T ss_dssp EEEECCTT
T ss_pred EEEeCCcc
Confidence 99998763
No 314
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=5.8e-09 Score=102.03 Aligned_cols=85 Identities=24% Similarity=0.347 Sum_probs=72.3
Q ss_pred CCCeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
.....+.+.+... +|||++.++.+ .|++|..|.++|||+++| |++||+|++|||+++.++++.+++..+...+..+
T Consensus 10 ~~~~~v~l~~~~~-g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 88 (103)
T 1wfv_A 10 FDYFTVDMEKGAK-GFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRV 88 (103)
T ss_dssp SCCEECCEECCTT-SSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEE
T ss_pred ceEEEEEEecCCC-cCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3445566766554 79999987643 489999999999999999 9999999999999999999999888887778899
Q ss_pred EEEEEeCcc
Q psy3835 1312 TVLAQYSVE 1320 (1659)
Q Consensus 1312 ~L~v~r~~~ 1320 (1659)
.|+|.|+..
T Consensus 89 ~l~v~R~~~ 97 (103)
T 1wfv_A 89 RLLLKRGTG 97 (103)
T ss_dssp CEEEECTTC
T ss_pred EEEEEECCC
Confidence 999998754
No 315
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.78 E-value=1.8e-08 Score=101.78 Aligned_cols=86 Identities=26% Similarity=0.375 Sum_probs=74.1
Q ss_pred CCCeEEEEecCCcCccCeEEecC------CCcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGG------NAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 1307 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg------~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~ 1307 (1659)
..++.|.|.+....+|||++.++ ...+++|..|.++|||+++| |++||+|++|||+++.++++.++..+|...
T Consensus 14 ~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 93 (122)
T 1v5q_A 14 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 93 (122)
T ss_dssp EEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34577888888777999999975 23579999999999999999 999999999999999998888888887754
Q ss_pred --CCeEEEEEEeCcc
Q psy3835 1308 --ADKVTVLAQYSVE 1320 (1659)
Q Consensus 1308 --~~~v~L~v~r~~~ 1320 (1659)
+..+.|+|.|+..
T Consensus 94 ~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 94 SITSKVTLEIEFDVA 108 (122)
T ss_dssp TTTTCEEEEEEEECC
T ss_pred CCCCeEEEEEEECCc
Confidence 6799999999753
No 316
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.78 E-value=4.6e-09 Score=102.76 Aligned_cols=83 Identities=16% Similarity=0.222 Sum_probs=72.3
Q ss_pred eEEEEEecCCCCceEEEEecCC--CcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEE
Q psy3835 1129 LRRVHIDKSVEPLGIQIQCLDS--GGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLV 1206 (1659)
Q Consensus 1129 ~~~v~l~k~~~~lG~sl~~~~~--~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 1206 (1659)
.+.|.+ +...+|||++.++.+ .+++|..|.++|||+++||++||+|++|||.++.++++.++..+++..+..+.|.|
T Consensus 6 ~~~v~~-~~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v 84 (103)
T 1v5l_A 6 SGNVVL-PGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKI 84 (103)
T ss_dssp CBCCEE-ESSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEE
T ss_pred EEEEEE-cCCCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence 344544 356799999988743 48999999999999999999999999999999999999999999988889999999
Q ss_pred EecCCc
Q psy3835 1207 QYSPDK 1212 (1659)
Q Consensus 1207 ~r~~~~ 1212 (1659)
.|++..
T Consensus 85 ~R~g~~ 90 (103)
T 1v5l_A 85 DRAETR 90 (103)
T ss_dssp CCCTTT
T ss_pred EECCeE
Confidence 998763
No 317
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=98.78 E-value=2.6e-07 Score=102.48 Aligned_cols=164 Identities=14% Similarity=0.188 Sum_probs=127.3
Q ss_pred CCCCcEEEECCCh---HHHHHHHhhhCCCcccccccceec--------------CChHHHHHhccCCceEEEEEeCC--e
Q psy3835 1472 PVLRPVILVGALS---DTVTDKLLQDFPDKFVRCAPEIMH--------------CPQAAMEKGLADNLFVDYRKKGA--Y 1532 (1659)
Q Consensus 1472 ~~~RpvVl~Gp~g---~~l~~~Ll~~~p~~f~~~v~~Ttr--------------vs~~~f~~~i~~~~flE~~~~~g--~ 1532 (1659)
.....++|+||+| +||++.|....|. +...++++++ .+...|..+...+.|++|..+.+ +
T Consensus 18 ~~Gei~~l~GpnGsGKSTLl~~l~gl~~~-i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~l~~~~~~~~n~~ 96 (207)
T 1znw_A 18 AVGRVVVLSGPSAVGKSTVVRCLRERIPN-LHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLH 96 (207)
T ss_dssp -CCCEEEEECSTTSSHHHHHHHHHHHSTT-CEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEEGGGTE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhCCc-eEEcccccccCCcccccCCCeeEecCHHHHHHHHhcCCceeehhhcCchh
Confidence 4567899999998 9999988877764 3334555553 45567888888888999999988 8
Q ss_pred eeeecHHHHHHHHHcCCCeEEEEcChhHHHHHHhcCCccEEEEEecCCHHHHHHHHhhhccccCCCCcccHHHHHHHHHH
Q psy3835 1533 FECTSVAAVKDACDKNNAHVILDVSLAGVERLHRQHVYPIVLLIKFKSTKQIKEIKEIRDGRYSSLDKVTAKAAKEMYEH 1612 (1659)
Q Consensus 1533 ~YGts~~~V~~v~~~~gk~~iLdi~~~~~~~l~~~~~~pivIfI~pps~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 1612 (1659)
+||++...+++.+.. ++.|+++++..|+..++...+..+++|+..|++..|.+... .++...+...++++..
T Consensus 97 ~~g~~~~~~~~~~~~-~~~~~~~l~~~gl~~~~~~~~~~lS~l~~~p~~~~LDep~~-------~l~~~~d~~~~~~l~~ 168 (207)
T 1znw_A 97 RSGTLAQPVRAAAAT-GVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLI-------GRGTETADVIQRRLDT 168 (207)
T ss_dssp EEEEEHHHHHHHHHH-TCCEEEECCHHHHHHHHHHCTTSEEEEEECSCHHHHHHHHH-------TTSCSCHHHHHHHHHH
T ss_pred hcCCcHHHHHHHHHc-CCeEEEEeCHHHHHHHHHhcCCcEEEEEECCCHHHHHHHHH-------hcCCCCHHHHHHHHHH
Confidence 899999999999999 99999999999999988888888999999999999998776 3334445556555544
Q ss_pred HHHHHHHcCCcceEEEeCCCCHHHHHHHHHHHHH
Q psy3835 1613 GLKIECEHKHYISAVIPAGVNIAYMCTQIQTAVE 1646 (1659)
Q Consensus 1613 a~~~e~~~~~~fd~vi~n~~~~~~~~~~l~~ii~ 1646 (1659)
..+ +....+.++.+++++ |++.++.....++.
T Consensus 169 ~l~-~l~~~~g~tvi~vtH-dl~~~~~~~d~i~~ 200 (207)
T 1znw_A 169 ARI-ELAAQGDFDKVVVNR-RLESACAELVSLLV 200 (207)
T ss_dssp HHH-HHHGGGGSSEEEECS-SHHHHHHHHHHHHC
T ss_pred HHH-HHhhhccCcEEEECC-CHHHHHHHHHHHHH
Confidence 432 233344689999999 99998877766664
No 318
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=2.2e-08 Score=95.11 Aligned_cols=71 Identities=24% Similarity=0.385 Sum_probs=62.4
Q ss_pred ecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeC
Q psy3835 1243 ETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYS 1318 (1659)
Q Consensus 1243 ~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~ 1318 (1659)
......+|||.+.+ | +|..|.++|||+++||++||+|++|||.++.+.++.++...+...+..+.|+|.+.
T Consensus 19 ~~~~~~~lG~~~~~----G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p~ 89 (90)
T 1y7n_A 19 RPDLRYQLGFSVQN----G-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPA 89 (90)
T ss_dssp ESSTTSCCCEEEET----T-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEECC
T ss_pred eCCCccccCeEecC----C-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 33455689999865 3 89999999999999999999999999999999999999998887888999999864
No 319
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.77 E-value=2.2e-08 Score=94.92 Aligned_cols=81 Identities=26% Similarity=0.319 Sum_probs=64.9
Q ss_pred CCeEEEEecCCc--CccCeEEecCC---CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe
Q psy3835 1236 EPRFLMIETRKC--SNLGISLVGGN---AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK 1310 (1659)
Q Consensus 1236 ~~~~v~l~k~~~--~~lGi~l~gg~---~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~ 1310 (1659)
..+.+.+.+... .+|||++.+.. ..|++|..|.++|||+++||++||+|++|||+++.++++.++...+. ...
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~--~~~ 83 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLS--QPS 83 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHH--SSE
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh--CCe
Confidence 346788888664 47999998632 24899999999999999999999999999999999999998888775 456
Q ss_pred EEEEEEeC
Q psy3835 1311 VTVLAQYS 1318 (1659)
Q Consensus 1311 v~L~v~r~ 1318 (1659)
++|+|..-
T Consensus 84 l~ltV~~~ 91 (94)
T 3kzd_A 84 LGLLVRTY 91 (94)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 77777653
No 320
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.77 E-value=1.1e-08 Score=99.37 Aligned_cols=82 Identities=23% Similarity=0.274 Sum_probs=70.6
Q ss_pred CCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 1314 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~ 1314 (1659)
...+.+.+.+... +|||.+.+. .|++|..|.++|||+++||++||+|++|||+++.++++.++...+...++.+.|+
T Consensus 14 ~~~~~v~l~~~~~-g~G~~~~~~--~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 90 (100)
T 1whd_A 14 GEKLQITIRRGKD-GFGFTICCD--SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILL 90 (100)
T ss_dssp CEEEEEEEECCSS-SSSCBCCCS--SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEE
T ss_pred cceEEEEEECCCC-eeeEEEeCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 3445677777654 899998764 6899999999999999999999999999999999999999888887777789999
Q ss_pred EEeCc
Q psy3835 1315 AQYSV 1319 (1659)
Q Consensus 1315 v~r~~ 1319 (1659)
|.|+.
T Consensus 91 v~R~~ 95 (100)
T 1whd_A 91 VWRVS 95 (100)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98863
No 321
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=3.3e-08 Score=100.76 Aligned_cols=93 Identities=28% Similarity=0.402 Sum_probs=76.5
Q ss_pred cCCeEEEEEEeCCCCCcceEEEEEeccCCCCcCeEecC------ceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCc
Q psy3835 794 SGTSALMVIRRRRVGARSLVTTQLQLNNSYDHGLTLES------GLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGL 867 (1659)
Q Consensus 794 ~~~~v~l~v~R~~~~~~~~~~~~i~~~~~~~lG~~~~~------gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~ 867 (1659)
.|..|.|+|.|++. ...+.+.+....+|||.+.. |++|..|.+||||+++| |++||+|++|||.++.+
T Consensus 7 ~g~~v~l~v~R~g~----~~~v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~- 80 (128)
T 1uf1_A 7 GDRRSTLHLLQGGD----EKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLN- 80 (128)
T ss_dssp TTTSCCSCCCCCSS----EEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSS-
T ss_pred CCCEEEEEEEeCCc----EEEEEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCC-
Confidence 45667788877742 24566665545789999854 89999999999999998 99999999999999999
Q ss_pred ccHHHHHHHHhcCCCeEEEEEEccCC
Q psy3835 868 SSAREGMALLSDSPDVLTITTLKPTS 893 (1659)
Q Consensus 868 ~~~~ea~~~l~~~~~~v~l~v~r~~~ 893 (1659)
.++.+++..++.. ..+.|.|.|...
T Consensus 81 ~~~~~~~~~~~~~-~~v~l~v~R~g~ 105 (128)
T 1uf1_A 81 ILHDEAVRLLKSS-RHLILTVKDVGR 105 (128)
T ss_dssp CCHHHHHHHHTTC-SEEEEEEECCSC
T ss_pred CCHHHHHHHHhcC-CeEEEEEEECCc
Confidence 8889999999875 689999998754
No 322
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.76 E-value=3.6e-08 Score=94.16 Aligned_cols=79 Identities=27% Similarity=0.437 Sum_probs=67.3
Q ss_pred eEEEEEecC--CCCceEEEEecCCCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEE
Q psy3835 1129 LRRVHIDKS--VEPLGIQIQCLDSGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITML 1205 (1659)
Q Consensus 1129 ~~~v~l~k~--~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 1205 (1659)
+..|.+.+. ...|||.+. .|++|..|.++|||+++| |++||.|++|||.++.++++.++..+++..+..+.|.
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 78 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMV 78 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEE----EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEE
T ss_pred cEEEEEEeCCCCCCCCEEEe----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEE
Confidence 456666654 368999876 589999999999999999 9999999999999999999999999998887899999
Q ss_pred EEecCC
Q psy3835 1206 VQYSPD 1211 (1659)
Q Consensus 1206 v~r~~~ 1211 (1659)
|.|++.
T Consensus 79 v~r~g~ 84 (92)
T 3cyy_A 79 VQRDER 84 (92)
T ss_dssp EEC---
T ss_pred EEeCCc
Confidence 998775
No 323
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=5.7e-08 Score=98.98 Aligned_cols=85 Identities=26% Similarity=0.369 Sum_probs=72.5
Q ss_pred CCeEEEEEecC-CCCceEEEEecC--CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEE
Q psy3835 1127 GELRRVHIDKS-VEPLGIQIQCLD--SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSIT 1203 (1659)
Q Consensus 1127 ~~~~~v~l~k~-~~~lG~sl~~~~--~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 1203 (1659)
+..+.+.+... ..+|||++.++. ..|++|..|.++|||+++||++||+|++|||.++.++++.+++..++. +..+.
T Consensus 19 g~~~~v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~v~ 97 (128)
T 1uf1_A 19 GDEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS-SRHLI 97 (128)
T ss_dssp SSEEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT-CSEEE
T ss_pred CcEEEEEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCeEE
Confidence 35677777765 378999998863 348999999999999999999999999999999999999888888876 57999
Q ss_pred EEEEecCCc
Q psy3835 1204 MLVQYSPDK 1212 (1659)
Q Consensus 1204 l~v~r~~~~ 1212 (1659)
|+|.|++..
T Consensus 98 l~v~R~g~~ 106 (128)
T 1uf1_A 98 LTVKDVGRL 106 (128)
T ss_dssp EEEECCSCC
T ss_pred EEEEECCcc
Confidence 999998763
No 324
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.76 E-value=3.2e-08 Score=99.65 Aligned_cols=82 Identities=26% Similarity=0.409 Sum_probs=69.2
Q ss_pred CeEEEEecCCcCccCeEEecCCC-----cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCC--C
Q psy3835 1237 PRFLMIETRKCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP--A 1308 (1659)
Q Consensus 1237 ~~~v~l~k~~~~~lGi~l~gg~~-----~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~--~ 1308 (1659)
...+.+.+.. .+|||++.++.. .|++|..|.++|||+++| |++||+|++|||+++.+++..++..++... +
T Consensus 31 ~~~v~l~~~~-~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g 109 (121)
T 2kom_A 31 RLNIQLKKGT-EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKME 109 (121)
T ss_dssp EEEEEEECCT-TCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSS
T ss_pred EEEEEEEcCC-CcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 3456666654 489999987643 589999999999999998 999999999999999999988888887753 7
Q ss_pred CeEEEEEEeCc
Q psy3835 1309 DKVTVLAQYSV 1319 (1659)
Q Consensus 1309 ~~v~L~v~r~~ 1319 (1659)
..|.|+|.|+.
T Consensus 110 ~~v~l~v~R~g 120 (121)
T 2kom_A 110 GTVSLLVFRQE 120 (121)
T ss_dssp CEEEEEEEECC
T ss_pred CEEEEEEEeCC
Confidence 89999998863
No 325
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=5.9e-09 Score=103.13 Aligned_cols=82 Identities=23% Similarity=0.299 Sum_probs=71.5
Q ss_pred CeEEEEEecCCCCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCC-eEEEEE
Q psy3835 1128 ELRRVHIDKSVEPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGN-SITMLV 1206 (1659)
Q Consensus 1128 ~~~~v~l~k~~~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~-~v~l~v 1206 (1659)
.++.|.|.+.+.+|||.+.+. .+++|..|.+++||+++||++||+|++|||.++.++++.++..+++..+. .+.|+|
T Consensus 15 ~~r~v~l~~~~~~~G~~l~~~--~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V 92 (111)
T 1vae_A 15 PPRGIHFTVEEGDLGFTLRGN--TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKV 92 (111)
T ss_dssp CCCCCCEECCSSCCSCCEESS--SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEE
T ss_pred CCeEEEEEcCCCcccEEEeCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEE
Confidence 456788899889999999754 57899999999999999999999999999999999999999999987654 699999
Q ss_pred EecCC
Q psy3835 1207 QYSPD 1211 (1659)
Q Consensus 1207 ~r~~~ 1211 (1659)
.+...
T Consensus 93 ~~~~~ 97 (111)
T 1vae_A 93 VSLLD 97 (111)
T ss_dssp ECEEC
T ss_pred EecCC
Confidence 87543
No 326
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.75 E-value=5e-09 Score=106.52 Aligned_cols=86 Identities=23% Similarity=0.351 Sum_probs=74.9
Q ss_pred CCCCeEEEEecCCcCccCeEEecC------------------------------CCcceEEEEeCCCChhhhcCCCCCCE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGG------------------------------NAVGIYVHSVQSGSLGYSAGLRTGDR 1283 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg------------------------------~~~gi~V~~V~~gs~A~~~gL~~GD~ 1283 (1659)
++.++.|.|.+... +|||++.+. ...|++|..|.++|||+++||++||+
T Consensus 6 ~~~~r~v~l~r~~~-g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~ 84 (126)
T 2yuy_A 6 SGGPKTVTLKRTSQ-GFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLCTGDR 84 (126)
T ss_dssp SSSCCCEEEECCSS-SCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHTCCSSCC
T ss_pred CCCCEEEEEEECCC-CcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcCCCCCCE
Confidence 56788899998764 899999751 12469999999999999999999999
Q ss_pred EEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1284 ILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1284 Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
|++|||+++.++++.+++.+|+..+..|.|+|.|+..
T Consensus 85 I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 85 IIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp CCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred EEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 9999999999999999999998888999999988643
No 327
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.23 E-value=9.6e-10 Score=109.09 Aligned_cols=84 Identities=27% Similarity=0.411 Sum_probs=73.3
Q ss_pred CCCCCeEEEEecCCcCccCeEEecCCC--cceEEEEeCCCChhhh-cCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCC
Q psy3835 1233 GSGEPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKPAD 1309 (1659)
Q Consensus 1233 ~~~~~~~v~l~k~~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~-~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~ 1309 (1659)
.+..++.+.+.+....+|||++.++.. .|++|..|.+||||++ +||++||+|++|||.++.+.+..+++..++..++
T Consensus 24 ~~~~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~ 103 (112)
T 2lob_A 24 YFQGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRG 103 (112)
Confidence 345678889999888899999998643 4799999999999999 9999999999999999999999999888877777
Q ss_pred eEEEEEE
Q psy3835 1310 KVTVLAQ 1316 (1659)
Q Consensus 1310 ~v~L~v~ 1316 (1659)
.++|+|.
T Consensus 104 ~v~l~V~ 110 (112)
T 2lob_A 104 EIEFEVV 110 (112)
Confidence 7888775
No 328
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.75 E-value=3.1e-08 Score=92.06 Aligned_cols=71 Identities=30% Similarity=0.463 Sum_probs=63.8
Q ss_pred cCCCCcCeEecCceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcCCCeEEEEEEcc
Q psy3835 820 NNSYDHGLTLESGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDSPDVLTITTLKP 891 (1659)
Q Consensus 820 ~~~~~lG~~~~~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~~~~v~l~v~r~ 891 (1659)
.....|||.+..|++|..|.++|||+++|.|++||+|++|||.++.+ +++.++..+|+...+.+.|.|.|.
T Consensus 10 ~~~~~~g~~~~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~-~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 10 RKNEEYGLRLASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTEN-MSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp STTCCCCEEEEEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTT-CCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred CCCCCCCEEEeCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC-CCHHHHHHHHHCCCCeEEEEEEeC
Confidence 34568999888999999999999999988799999999999999998 889999999998778899998874
No 329
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.74 E-value=1.8e-08 Score=101.59 Aligned_cols=78 Identities=28% Similarity=0.342 Sum_probs=67.4
Q ss_pred EEEEec-cCCCCcCeEe---cCceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcC--CCeEEEE
Q psy3835 814 TTQLQL-NNSYDHGLTL---ESGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDS--PDVLTIT 887 (1659)
Q Consensus 814 ~~~i~~-~~~~~lG~~~---~~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~--~~~v~l~ 887 (1659)
...+.+ ++..+|||++ ..+++|..|.+||||+++|+|++||+|++|||.++.+ .+|.+++.+|+.. +..|.|+
T Consensus 28 ~~~~~l~k~~~glG~~i~~~~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~-~s~~d~~~~l~~~~~G~~v~l~ 106 (126)
T 1wif_A 28 VIQTKLTVGNLGLGLVVIQNGPYLQISHLINKGAAASDGILQPGDVLISVGHANVLG-YTLREFLKLLQNITIGTVLQIK 106 (126)
T ss_dssp EEEEEEECCTTCCCCCEEEETTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTT-CCHHHHHHHHTSCCSSCEEEEE
T ss_pred eEEEEEecCCceEeEEEEcCCCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCC-CCHHHHHHHHhcCCCCCEEEEE
Confidence 334444 5668999988 4678999999999999999999999999999999998 8899999999984 4789999
Q ss_pred EEccC
Q psy3835 888 TLKPT 892 (1659)
Q Consensus 888 v~r~~ 892 (1659)
|.|..
T Consensus 107 V~R~~ 111 (126)
T 1wif_A 107 AYRGF 111 (126)
T ss_dssp EESSS
T ss_pred EEECC
Confidence 99873
No 330
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=1.7e-08 Score=100.14 Aligned_cols=88 Identities=25% Similarity=0.293 Sum_probs=72.8
Q ss_pred CCCeEEEEecCCcC--ccCeEEecCCC---cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCC
Q psy3835 1235 GEPRFLMIETRKCS--NLGISLVGGNA---VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPAD 1309 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~--~lGi~l~gg~~---~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~ 1309 (1659)
..++.+.|.+.... +|||++.+... .|++|..|.++|||+++||++||+|++|||+++.++++.++...+.. .
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~ 91 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ--P 91 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS--S
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC--C
Confidence 34577888887763 69999986421 58999999999999999999999999999999999988888877754 4
Q ss_pred eEEEEEEeCcccccc
Q psy3835 1310 KVTVLAQYSVERYNE 1324 (1659)
Q Consensus 1310 ~v~L~v~r~~~~~~~ 1324 (1659)
.+.|+|.|.+..+..
T Consensus 92 ~v~l~v~R~p~~~~~ 106 (114)
T 2d8i_A 92 SLGLLVRTYPELEEG 106 (114)
T ss_dssp EEEEEEEECCCSCCS
T ss_pred cEEEEEEECCCCCcc
Confidence 899999998765543
No 331
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.74 E-value=4.2e-08 Score=93.29 Aligned_cols=80 Identities=20% Similarity=0.246 Sum_probs=66.7
Q ss_pred EEEEEecCC---CCceEEEEecCCCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh--CCCeEEE
Q psy3835 1130 RRVHIDKSV---EPLGIQIQCLDSGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ--CGNSITM 1204 (1659)
Q Consensus 1130 ~~v~l~k~~---~~lG~sl~~~~~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l 1204 (1659)
..+.+.+.. .+|||++... ..|++|..|.++|||+++||++||.|++|||.++.+.++.++..++.. .+..+.|
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l 83 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWD-IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVM 83 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEE-TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEE
T ss_pred eEEEEEecCCCCCcccEEEEec-CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 445566553 3799998754 468999999999999999999999999999999977788888888874 5789999
Q ss_pred EEEecC
Q psy3835 1205 LVQYSP 1210 (1659)
Q Consensus 1205 ~v~r~~ 1210 (1659)
+|.|++
T Consensus 84 ~v~R~g 89 (90)
T 2eaq_A 84 DVRRYG 89 (90)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 999865
No 332
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.73 E-value=1.7e-09 Score=133.81 Aligned_cols=122 Identities=21% Similarity=0.319 Sum_probs=38.1
Q ss_pred CCCCCCCCCEEEEECCEeCCCCChHHHHHHHHh--cCCeEEEEEEeCCCCCcceEEEEEecc------------CCCCcC
Q psy3835 761 NPPSYKVNDCIVRVNNLDCSNVSKRMVLETVRS--SGTSALMVIRRRRVGARSLVTTQLQLN------------NSYDHG 826 (1659)
Q Consensus 761 ~~g~l~~GD~Il~VNg~~~~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~~~~~~~i~~~------------~~~~lG 826 (1659)
..++|++||.|++|||.++.++. +...++.. .|..+.|+|.|++... .+.+++. ...-+|
T Consensus 300 ~~AGL~~GDvI~~inG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~~----~~~v~~~~~~~~~~~~~~~~~~~~G 373 (448)
T 1ky9_A 300 AKAGIKAGDVITSLNGKPISSFA--ALRAQVGTMPVGSKLTLGLLRDGKQV----NVNLELQQSSQNQVDSSSIFNGIEG 373 (448)
T ss_dssp TTTTCCTTCEECBSSSSBCCSSH--HHHHHTTSSBTTCCCEEEEESSSCEE----ECCCC--------------------
T ss_pred HHcCCCCCCEEEEECCEEcCCHH--HHHHHHHhcCCCCEEEEEEEECCEEE----EEEEEEecCCCcccccccccccccc
Confidence 66899999999999999999984 44555553 5889999999985221 1111110 012247
Q ss_pred eEe-----cCceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcCCCeEEEEEEccC
Q psy3835 827 LTL-----ESGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDSPDVLTITTLKPT 892 (1659)
Q Consensus 827 ~~~-----~~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~~~~v~l~v~r~~ 892 (1659)
+.+ ..|++|..|.+||||++.| |++||.|++|||.++.+ ++++..+|+..++.+.|.|.|..
T Consensus 374 ~~l~~~~~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~---~~~l~~~l~~~~~~v~l~v~R~g 440 (448)
T 1ky9_A 374 AEMSNKGKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKN---IAELRKVLDSKPSVLALNIQRGD 440 (448)
T ss_dssp -----------------------------------------------------------------------
T ss_pred eEeeccCCCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCC---HHHHHHHHHcCCCeEEEEEEECC
Confidence 766 3689999999999999887 99999999999999998 78888899887778889888874
No 333
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.73 E-value=2.1e-08 Score=102.14 Aligned_cols=87 Identities=25% Similarity=0.300 Sum_probs=76.9
Q ss_pred CCCeEEEEEecCC-CCceEEEEecC-CCcEEEEEeCCCChhhhcCC-CCCCEEEeeCCeecCCCCHHHHHHHHHhC-CCe
Q psy3835 1126 PGELRRVHIDKSV-EPLGIQIQCLD-SGGVFVSTVSEHSLASQVGL-QVGDQLLEVCGINMRSATYQLAASVLRQC-GNS 1201 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~-~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~GL-~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~~ 1201 (1659)
...++.|.+.++. .+|||++.+.. ..|++|..|.++|||+++|| ++||+|++|||.++.++++.++..+++.. +..
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~ 85 (127)
T 1b8q_A 6 EPNVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASET 85 (127)
T ss_dssp CCCSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSC
T ss_pred CCceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCe
Confidence 3467889999985 89999998874 35899999999999999997 99999999999999999999999999864 679
Q ss_pred EEEEEEecCCc
Q psy3835 1202 ITMLVQYSPDK 1212 (1659)
Q Consensus 1202 v~l~v~r~~~~ 1212 (1659)
+.|.|.|++..
T Consensus 86 v~l~v~R~g~~ 96 (127)
T 1b8q_A 86 HVVLILRGPEG 96 (127)
T ss_dssp EEEEEECCCCS
T ss_pred EEEEEEeCCce
Confidence 99999998764
No 334
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.72 E-value=3.1e-08 Score=108.89 Aligned_cols=69 Identities=26% Similarity=0.391 Sum_probs=65.1
Q ss_pred CCceEEEEecC----------CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEe
Q psy3835 1139 EPLGIQIQCLD----------SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQY 1208 (1659)
Q Consensus 1139 ~~lG~sl~~~~----------~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r 1208 (1659)
.+|||+|.|+. ..|++|..|.++|||++ ||++||+|++|||.++.+++|.+++..++.++..|.|.|.|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 58999999973 46999999999999999 99999999999999999999999999999998999999999
No 335
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.71 E-value=2.4e-08 Score=97.24 Aligned_cols=85 Identities=38% Similarity=0.551 Sum_probs=70.7
Q ss_pred CCCeEEEEecC-CcCccCeEEecCC--CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1235 GEPRFLMIETR-KCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1235 ~~~~~v~l~k~-~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
...+.+.+.+. ...+|||++.++. ..|++|..|.++|||+++||++||+|++|||+++.++++.+++..+ +.+..+
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~-~~~~~v 85 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKAL-KGSKKL 85 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHS-SSSSSC
T ss_pred CccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhh-cCCCeE
Confidence 45677788773 4568999998764 3589999999999999999999999999999999999997766554 456789
Q ss_pred EEEEEeCcc
Q psy3835 1312 TVLAQYSVE 1320 (1659)
Q Consensus 1312 ~L~v~r~~~ 1320 (1659)
.|+|.|+..
T Consensus 86 ~l~v~R~g~ 94 (101)
T 1uez_A 86 VLSVYSAGR 94 (101)
T ss_dssp CEEECCCCC
T ss_pred EEEEEECCc
Confidence 999988743
No 336
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.71 E-value=3.5e-08 Score=101.80 Aligned_cols=86 Identities=31% Similarity=0.422 Sum_probs=71.0
Q ss_pred CCCeEEEEecCC---cCccCeEEecCC--------------CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCH
Q psy3835 1235 GEPRFLMIETRK---CSNLGISLVGGN--------------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATA 1297 (1659)
Q Consensus 1235 ~~~~~v~l~k~~---~~~lGi~l~gg~--------------~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~ 1297 (1659)
+..+.+.|.+.. ...|||++.++. ..|++|..|.+||||+++||++||+|++|||+++.+++.
T Consensus 22 ~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~ 101 (139)
T 2vz5_A 22 SMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTH 101 (139)
T ss_dssp CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCH
T ss_pred CceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCH
Confidence 345667776643 237999997642 358999999999999999999999999999999999999
Q ss_pred HHHHHHHcC-CCCeEEEEEEeCcc
Q psy3835 1298 EEAAYELAK-PADKVTVLAQYSVE 1320 (1659)
Q Consensus 1298 ~~~~~~l~~-~~~~v~L~v~r~~~ 1320 (1659)
.++...+.. .+..+.|+|.|+..
T Consensus 102 ~~~~~~l~~~~g~~v~l~v~R~g~ 125 (139)
T 2vz5_A 102 DQARKRLTKRSEEVVRLLVTRQSL 125 (139)
T ss_dssp HHHHHHHCCTTCSEEEEEEEECC-
T ss_pred HHHHHHHHhCCCCEEEEEEEECCE
Confidence 999988876 45789999999753
No 337
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.71 E-value=4.9e-08 Score=93.20 Aligned_cols=71 Identities=30% Similarity=0.462 Sum_probs=63.7
Q ss_pred CCCCcCeEecCceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcCCCeEEEEEEccC
Q psy3835 821 NSYDHGLTLESGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDSPDVLTITTLKPT 892 (1659)
Q Consensus 821 ~~~~lG~~~~~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~~~~v~l~v~r~~ 892 (1659)
....|||.+..|++|..|.+||||+++|.|++||+|++|||.++.+ +++.++..+|+...+.+.|.|.|..
T Consensus 13 ~~~~~g~~~~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~-~~~~~~~~~l~~~~~~v~l~v~r~g 83 (92)
T 3cyy_A 13 KNEEYGLRLASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTEN-MSLTDAKTLIERSKGKLKMVVQRDE 83 (92)
T ss_dssp TTSCCCEEEEEEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTT-CCHHHHHHHHHTTTTEEEEEEEC--
T ss_pred CCCCCCEEEeCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHcCCCcEEEEEEeCC
Confidence 3467999888899999999999999987799999999999999998 8899999999988889999998875
No 338
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.71 E-value=5.5e-08 Score=90.36 Aligned_cols=76 Identities=24% Similarity=0.431 Sum_probs=65.3
Q ss_pred EEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEe
Q psy3835 1239 FLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQY 1317 (1659)
Q Consensus 1239 ~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r 1317 (1659)
+..+.......|||.+. .|++|..|.++|||+++| |++||+|++|||.++.+++..++...+....+.+.|+|.|
T Consensus 4 ~~~~~~~~~~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 79 (81)
T 2rcz_A 4 VTLVKSRKNEEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQR 79 (81)
T ss_dssp EEEECCSTTCCCCEEEE----EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC
T ss_pred EEEEECCCCCCCCEEEe----CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEe
Confidence 44556666678999876 489999999999999999 9999999999999999999999888888777789999987
Q ss_pred C
Q psy3835 1318 S 1318 (1659)
Q Consensus 1318 ~ 1318 (1659)
+
T Consensus 80 ~ 80 (81)
T 2rcz_A 80 D 80 (81)
T ss_dssp -
T ss_pred C
Confidence 4
No 339
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.70 E-value=5.2e-08 Score=95.42 Aligned_cols=70 Identities=37% Similarity=0.555 Sum_probs=61.2
Q ss_pred ccCeEEecCC--------------CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcC-CCCeEEE
Q psy3835 1249 NLGISLVGGN--------------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK-PADKVTV 1313 (1659)
Q Consensus 1249 ~lGi~l~gg~--------------~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~-~~~~v~L 1313 (1659)
.|||++.|+. ..|++|..|.++|||+++||++||+|++|||.++.++++.+++..+.. .+..+.|
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l 99 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRL 99 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEE
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEE
Confidence 6999999542 347999999999999999999999999999999999999998888865 4578999
Q ss_pred EEEeC
Q psy3835 1314 LAQYS 1318 (1659)
Q Consensus 1314 ~v~r~ 1318 (1659)
+|.|.
T Consensus 100 ~v~R~ 104 (104)
T 3sfj_A 100 LVTRQ 104 (104)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 98873
No 340
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.70 E-value=5.7e-08 Score=96.85 Aligned_cols=84 Identities=29% Similarity=0.448 Sum_probs=71.9
Q ss_pred CCCCeEEEEecCCcCccCeEEecCC--CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 1311 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~--~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v 1311 (1659)
....+.+.+.+....+|||++.++. ..|++|..|.++|||+++||++||+|++|||+++.++++.+++..+... ..+
T Consensus 13 ~~~~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~v 91 (114)
T 1x5n_A 13 ENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RSL 91 (114)
T ss_dssp CCSSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC-SSE
T ss_pred CCCcEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CeE
Confidence 4556888888878889999999763 3589999999999999999999999999999999999987777766544 689
Q ss_pred EEEEEeC
Q psy3835 1312 TVLAQYS 1318 (1659)
Q Consensus 1312 ~L~v~r~ 1318 (1659)
.|+|.|+
T Consensus 92 ~l~v~r~ 98 (114)
T 1x5n_A 92 TISIVAA 98 (114)
T ss_dssp EEEECSS
T ss_pred EEEEEcC
Confidence 9999876
No 341
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.69 E-value=1.5e-08 Score=112.30 Aligned_cols=86 Identities=23% Similarity=0.333 Sum_probs=76.8
Q ss_pred CCCeEEEEEecCCCCceEEEEecC-CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeE-E
Q psy3835 1126 PGELRRVHIDKSVEPLGIQIQCLD-SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSI-T 1203 (1659)
Q Consensus 1126 ~~~~~~v~l~k~~~~lG~sl~~~~-~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v-~ 1203 (1659)
...++.|.|.+...+|||+|.++. ..|++|..|.+||||+++||++||+|++|||.++.++++.++..+++..+..| .
T Consensus 7 ~~~~r~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~~ 86 (216)
T 2krg_A 7 MLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKL 86 (216)
T ss_dssp TCCCEEEEEECCSSSSCEEECCCSSSCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEEE
T ss_pred ccceEEEEEEeCCCCceEEEEecCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEE
Confidence 356799999999999999998874 35899999999999999999999999999999999999999999988778888 8
Q ss_pred EEEEecCC
Q psy3835 1204 MLVQYSPD 1211 (1659)
Q Consensus 1204 l~v~r~~~ 1211 (1659)
|+|.|++.
T Consensus 87 l~V~R~g~ 94 (216)
T 2krg_A 87 LVVDRETD 94 (216)
T ss_dssp EECCHHHH
T ss_pred EEEEECCE
Confidence 88877665
No 342
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.68 E-value=9.3e-08 Score=94.97 Aligned_cols=83 Identities=22% Similarity=0.225 Sum_probs=70.7
Q ss_pred eEEEEecCCcCccCeEEecCC-CcceEEEEeCCCChhhhcCC-CCCCEEEEECCeeCCCcCHHHHHHHHcC-CCCeEEEE
Q psy3835 1238 RFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGL-RTGDRILEYNGTDLRAATAEEAAYELAK-PADKVTVL 1314 (1659)
Q Consensus 1238 ~~v~l~k~~~~~lGi~l~gg~-~~gi~V~~V~~gs~A~~~gL-~~GD~Il~VNg~~v~~~t~~~~~~~l~~-~~~~v~L~ 1314 (1659)
..|.|.+....+|||++.+.. ..|++|..|.+||||+++|| ++||+|++|||.++.++++.++...+.. .+..+.|.
T Consensus 3 ~~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~ 82 (112)
T 1qau_A 3 ISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVL 82 (112)
T ss_dssp EEEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEE
T ss_pred EEEEEEcCCCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEE
Confidence 346777776678999998764 35899999999999999998 9999999999999999888888877764 46899999
Q ss_pred EEeCcc
Q psy3835 1315 AQYSVE 1320 (1659)
Q Consensus 1315 v~r~~~ 1320 (1659)
|.|+..
T Consensus 83 v~R~g~ 88 (112)
T 1qau_A 83 ILRGPE 88 (112)
T ss_dssp EEECCT
T ss_pred EEeCCc
Confidence 999753
No 343
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.67 E-value=1.6e-08 Score=98.93 Aligned_cols=75 Identities=20% Similarity=0.263 Sum_probs=66.6
Q ss_pred CcCccCeEEecCCC--cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1246 KCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1246 ~~~~lGi~l~gg~~--~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
....|||++.++.+ .+++|..|.++|||+++||++||+|++|||+++.++++.++...+...+..+.|+|.|+..
T Consensus 13 ~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 13 GPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET 89 (103)
T ss_dssp SSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCTT
T ss_pred CCCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCe
Confidence 34489999987653 4899999999999999999999999999999999999999998888778999999998754
No 344
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.67 E-value=1.6e-08 Score=100.04 Aligned_cols=86 Identities=22% Similarity=0.277 Sum_probs=71.3
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCC-eEE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPAD-KVT 1312 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~-~v~ 1312 (1659)
+..++.|.|.+.. .+|||++.+. .+++|..|.++|||+++||++||+|++|||+++.++++.++...+....+ .+.
T Consensus 13 ~~~~r~v~l~~~~-~~~G~~l~~~--~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~ 89 (111)
T 1vae_A 13 WSPPRGIHFTVEE-GDLGFTLRGN--TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVE 89 (111)
T ss_dssp ECCCCCCCEECCS-SCCSCCEESS--SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEEC
T ss_pred CCCCeEEEEEcCC-CcccEEEeCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEE
Confidence 4566778888854 5999998764 58999999999999999999999999999999998888888888776544 699
Q ss_pred EEEEeCcccc
Q psy3835 1313 VLAQYSVERY 1322 (1659)
Q Consensus 1313 L~v~r~~~~~ 1322 (1659)
|+|.+.....
T Consensus 90 l~V~~~~~~~ 99 (111)
T 1vae_A 90 MKVVSLLDST 99 (111)
T ss_dssp EEEECEECCC
T ss_pred EEEEecCCCc
Confidence 9998764433
No 345
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.66 E-value=6.8e-08 Score=98.46 Aligned_cols=86 Identities=20% Similarity=0.349 Sum_probs=73.6
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC-cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCC-CeE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA-VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPA-DKV 1311 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~-~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~-~~v 1311 (1659)
...++++.+.+... +|||++.++.. .|++|..|.++|||+++||++||+|++|||+++.+++..++...+.... ..+
T Consensus 7 ~~~~r~v~l~~~~~-g~G~~l~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 85 (128)
T 2kjd_A 7 MLRPRLCTMKKGPS-GYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK 85 (128)
T ss_dssp TCCCEEEEEECCSS-SCCEEEEECSSSCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEE
T ss_pred CCCcEEEEEecCCC-cccEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEE
Confidence 45688999998775 89999987653 4899999999999999999999999999999999998888888887654 456
Q ss_pred EEEEEeCcc
Q psy3835 1312 TVLAQYSVE 1320 (1659)
Q Consensus 1312 ~L~v~r~~~ 1320 (1659)
.|+|.|+..
T Consensus 86 ~l~v~R~g~ 94 (128)
T 2kjd_A 86 LLVVDRETD 94 (128)
T ss_dssp EEEECHHHH
T ss_pred EEEEEeCCc
Confidence 788888754
No 346
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=1.1e-07 Score=91.42 Aligned_cols=83 Identities=18% Similarity=0.229 Sum_probs=69.6
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcC--CCCeE
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK--PADKV 1311 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~--~~~~v 1311 (1659)
....+.+.+.+.. .+|||++.+. ..|++|..|.++ |+.+||++||+|++|||+++.++++.+++..|+. .+..+
T Consensus 8 ~~~~~~v~l~~~~-~g~G~~i~~~-~~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v 83 (96)
T 1ujv_A 8 QAELMTLTIVKGA-QGFGFTIADS-PTGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSET 83 (96)
T ss_dssp CCCCEEEEEECCS-SSSSEEEEEE-TTEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEE
T ss_pred CceEEEEEEEeCC-CceeEEEEcC-CCCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEE
Confidence 3456778888866 4999999753 348999999984 6779999999999999999999999999888876 37899
Q ss_pred EEEEEeCcc
Q psy3835 1312 TVLAQYSVE 1320 (1659)
Q Consensus 1312 ~L~v~r~~~ 1320 (1659)
.|+|.|+..
T Consensus 84 ~l~v~R~g~ 92 (96)
T 1ujv_A 84 SLIIHRGSG 92 (96)
T ss_dssp EEEEECCSS
T ss_pred EEEEEECCC
Confidence 999998753
No 347
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.66 E-value=8.4e-08 Score=95.91 Aligned_cols=73 Identities=19% Similarity=0.334 Sum_probs=63.4
Q ss_pred CCceEEEEecC-----CCcEEEEEeCC--CChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEecCC
Q psy3835 1139 EPLGIQIQCLD-----SGGVFVSTVSE--HSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1139 ~~lG~sl~~~~-----~~gv~I~~V~~--gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 1211 (1659)
+.+||++.... ..|++|..|.+ ++||+++||++||+|++|||.++.++++.++...++..+..+.|+|.|++.
T Consensus 27 g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~ 106 (118)
T 2yub_A 27 CRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPV 106 (118)
T ss_dssp SSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSS
T ss_pred CCceEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCE
Confidence 45666665432 36999999999 999999999999999999999999999999999988777899999999876
No 348
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=1.1e-07 Score=96.38 Aligned_cols=85 Identities=20% Similarity=0.421 Sum_probs=69.5
Q ss_pred CCeEEEEEecCC--CCceEEEEecC----CCcEEEEEeCCCChhhhcC-CCCCCEEEeeCCeecCCCCHHHHHHHHHhC-
Q psy3835 1127 GELRRVHIDKSV--EPLGIQIQCLD----SGGVFVSTVSEHSLASQVG-LQVGDQLLEVCGINMRSATYQLAASVLRQC- 1198 (1659)
Q Consensus 1127 ~~~~~v~l~k~~--~~lG~sl~~~~----~~gv~I~~V~~gs~A~~~G-L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~- 1198 (1659)
...+.+.+.+.+ .+|||++.... ..|++|..|.++|||+++| |++||+|++|||.++.+ +.++..+++..
T Consensus 18 ~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~~~ 95 (124)
T 1wh1_A 18 LELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSEE 95 (124)
T ss_dssp CEECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTCSS
T ss_pred ceEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHhCC
Confidence 344555565653 48999998774 3799999999999999999 99999999999999985 66777888764
Q ss_pred CCeEEEEEEecCCcc
Q psy3835 1199 GNSITMLVQYSPDKY 1213 (1659)
Q Consensus 1199 ~~~v~l~v~r~~~~~ 1213 (1659)
+..|.|+|.|++...
T Consensus 96 g~~v~l~v~R~g~~~ 110 (124)
T 1wh1_A 96 NKNFSLLIARPELQL 110 (124)
T ss_dssp CCSCCEEEEECSSCC
T ss_pred CCEEEEEEEECCEEe
Confidence 789999999987643
No 349
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.62 E-value=8.4e-08 Score=91.18 Aligned_cols=70 Identities=23% Similarity=0.298 Sum_probs=58.9
Q ss_pred ccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcC--CCCeEEEEEEeCc
Q psy3835 1249 NLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK--PADKVTVLAQYSV 1319 (1659)
Q Consensus 1249 ~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~--~~~~v~L~v~r~~ 1319 (1659)
.|||++... ..|++|..|.++|||+++||++||+|++|||.++.+.+..+....+.. .+..+.|+|.|+.
T Consensus 18 ~lG~~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 18 DFGFTIKWD-IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp CCSEEEEEE-TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cccEEEEec-CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 789988753 358999999999999999999999999999999976677766666653 5789999998863
No 350
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.61 E-value=1.1e-07 Score=96.86 Aligned_cols=86 Identities=21% Similarity=0.213 Sum_probs=74.5
Q ss_pred CCCeEEEEecCCcCccCeEEecCCC-cceEEEEeCCCChhhhcCC-CCCCEEEEECCeeCCCcCHHHHHHHHcC-CCCeE
Q psy3835 1235 GEPRFLMIETRKCSNLGISLVGGNA-VGIYVHSVQSGSLGYSAGL-RTGDRILEYNGTDLRAATAEEAAYELAK-PADKV 1311 (1659)
Q Consensus 1235 ~~~~~v~l~k~~~~~lGi~l~gg~~-~gi~V~~V~~gs~A~~~gL-~~GD~Il~VNg~~v~~~t~~~~~~~l~~-~~~~v 1311 (1659)
...+.+.+.+....+|||++.+..+ .|++|..|.+||||+++|| ++||+|++|||+++.+++..++...+.. .+..+
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v 86 (127)
T 1b8q_A 7 PNVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETH 86 (127)
T ss_dssp CCSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCE
T ss_pred CceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeE
Confidence 4577889988876799999987643 5899999999999999998 9999999999999999888888888875 45799
Q ss_pred EEEEEeCcc
Q psy3835 1312 TVLAQYSVE 1320 (1659)
Q Consensus 1312 ~L~v~r~~~ 1320 (1659)
.|.|.|+..
T Consensus 87 ~l~v~R~g~ 95 (127)
T 1b8q_A 87 VVLILRGPE 95 (127)
T ss_dssp EEEEECCCC
T ss_pred EEEEEeCCc
Confidence 999998754
No 351
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.57 E-value=1.8e-07 Score=93.51 Aligned_cols=83 Identities=23% Similarity=0.309 Sum_probs=66.2
Q ss_pred eEEEEecCCcCccCeEEecCC-----CcceEEEEeCC--CChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCe
Q psy3835 1238 RFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQS--GSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK 1310 (1659)
Q Consensus 1238 ~~v~l~k~~~~~lGi~l~gg~-----~~gi~V~~V~~--gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~ 1310 (1659)
+++.+.+.....+||.+.... ..|++|..|.+ +|||+++||++||+|++|||.++.++++.+....+...+..
T Consensus 17 ~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~ 96 (118)
T 2yub_A 17 TLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQT 96 (118)
T ss_dssp EEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSC
T ss_pred EEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhCCCE
Confidence 344444444446777776331 35899999999 99999999999999999999999999888888777766779
Q ss_pred EEEEEEeCcc
Q psy3835 1311 VTVLAQYSVE 1320 (1659)
Q Consensus 1311 v~L~v~r~~~ 1320 (1659)
+.|+|.|+..
T Consensus 97 v~l~v~R~g~ 106 (118)
T 2yub_A 97 LQLLIEHDPV 106 (118)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEECCE
Confidence 9999999754
No 352
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.57 E-value=1.2e-07 Score=104.19 Aligned_cols=69 Identities=28% Similarity=0.380 Sum_probs=63.8
Q ss_pred CccCeEEecCC----------CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEe
Q psy3835 1248 SNLGISLVGGN----------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQY 1317 (1659)
Q Consensus 1248 ~~lGi~l~gg~----------~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r 1317 (1659)
.+|||++.|+. ..|++|..|.+||||++ ||++||+|++|||+++.++++.+++..++..++.|.|.|.|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 47999999863 35899999999999999 99999999999999999999999999988888899999998
No 353
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.51 E-value=2.9e-07 Score=87.57 Aligned_cols=76 Identities=25% Similarity=0.298 Sum_probs=62.4
Q ss_pred EEEecCCcCccCeEEecCCCcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcC---CCCeEEEEEE
Q psy3835 1240 LMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK---PADKVTVLAQ 1316 (1659)
Q Consensus 1240 v~l~k~~~~~lGi~l~gg~~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~---~~~~v~L~v~ 1316 (1659)
+.+.+. ..++||.+... ..+++|..|.+||||+++||++||+|++|||.++...+..+....+.. .++++.|.|.
T Consensus 21 l~l~~~-~~g~G~~l~~~-~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 21 LLILPQ-EEDYGFDIEEK-NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp EEECCC-SSSSSEEEEEE-TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEeC-CCcccEEEEcc-CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 444443 34899998764 358999999999999999999999999999999987777777777765 6899999986
Q ss_pred e
Q psy3835 1317 Y 1317 (1659)
Q Consensus 1317 r 1317 (1659)
.
T Consensus 99 ~ 99 (101)
T 3qik_A 99 T 99 (101)
T ss_dssp C
T ss_pred c
Confidence 4
No 354
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.47 E-value=8e-08 Score=106.38 Aligned_cols=87 Identities=21% Similarity=0.365 Sum_probs=74.3
Q ss_pred CCCCeEEEEecCCcCccCeEEecCCC-cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeE-
Q psy3835 1234 SGEPRFLMIETRKCSNLGISLVGGNA-VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV- 1311 (1659)
Q Consensus 1234 ~~~~~~v~l~k~~~~~lGi~l~gg~~-~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v- 1311 (1659)
...++.+.|.+... +|||++.++.. .|++|..|.+||||+++||++||+|++|||++|.++++.++...+...+..+
T Consensus 7 ~~~~r~v~l~k~~~-glG~~l~~~~~~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~ 85 (216)
T 2krg_A 7 MLRPRLCTMKKGPS-GYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK 85 (216)
T ss_dssp TCCCEEEEEECCSS-SSCEEECCCSSSCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEE
T ss_pred ccceEEEEEEeCCC-CceEEEEecCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEE
Confidence 35678899998775 89999987653 4899999999999999999999999999999999888888887776667788
Q ss_pred EEEEEeCccc
Q psy3835 1312 TVLAQYSVER 1321 (1659)
Q Consensus 1312 ~L~v~r~~~~ 1321 (1659)
.|+|.|+...
T Consensus 86 ~l~V~R~g~~ 95 (216)
T 2krg_A 86 LLVVDRETDE 95 (216)
T ss_dssp EEECCHHHHH
T ss_pred EEEEEECCEE
Confidence 8888876543
No 355
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.43 E-value=5.8e-07 Score=90.90 Aligned_cols=72 Identities=26% Similarity=0.511 Sum_probs=60.3
Q ss_pred CccCeEEecCCC----cceEEEEeCCCChhhhcC-CCCCCEEEEECCeeCCCcCHHHHHHHHcC-CCCeEEEEEEeCccc
Q psy3835 1248 SNLGISLVGGNA----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK-PADKVTVLAQYSVER 1321 (1659)
Q Consensus 1248 ~~lGi~l~gg~~----~gi~V~~V~~gs~A~~~g-L~~GD~Il~VNg~~v~~~t~~~~~~~l~~-~~~~v~L~v~r~~~~ 1321 (1659)
..|||++..... .|++|..|.++|||+++| |++||+|++|||+++.+ ..++...|.. .+..+.|+|.|+...
T Consensus 32 ~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 32 DKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSEENKNFSLLIARPELQ 109 (124)
T ss_dssp CCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTCSSCCSCCEEEEECSSC
T ss_pred CcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCEEEEEEEECCEE
Confidence 479999987643 699999999999999999 99999999999999986 4556666665 467899999998643
No 356
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=98.24 E-value=7.2e-07 Score=78.57 Aligned_cols=56 Identities=27% Similarity=0.360 Sum_probs=46.4
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
.+.|.+||+|+|.+..++ .|+|++||++.|++. .+.+||.+.... + ...|++|+..
T Consensus 4 ~~~~~~~Alydy~a~~~~--ELs~~~Gd~i~v~~~---~~~gWw~g~~~~-~---g~~G~~P~ny 59 (65)
T 2lj0_A 4 QDLFSYQALYSYIPQNDD--ELELRDGDIVDVMEK---CDDGWFVGTSRR-T---KQFGTFPGNY 59 (65)
T ss_dssp SSSCEEEESSCBCCSSTT--BCCBCTTCEEEEEEE---CTTSEEEEEETT-T---CCEEEEETTS
T ss_pred CcCEEEEEceeECCCCcC--CcCCCCCCEEEEeEe---CCCCEEEEEECC-C---CCEEEEehhH
Confidence 467889999999999877 899999999999984 577899986532 2 3589999975
No 357
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=98.21 E-value=8.7e-07 Score=76.54 Aligned_cols=52 Identities=25% Similarity=0.468 Sum_probs=41.9
Q ss_pred eeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1334 YMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1334 yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
.+||+|+|.+..+++ .|+|++|||+.|++. .+.+||.+.. .+| ..|++|+.+
T Consensus 5 ~~rAlydy~~~~~~e-~Ls~~~Gd~i~v~~~---~~~~Ww~g~~--~~G---~~G~fP~ny 56 (60)
T 2lx7_A 5 RCRTLYPFSGERHGQ-GLRFAAGELITLLQV---PDGGWWEGEK--EDG---LRGWFPASY 56 (60)
T ss_dssp EEEESCCCCSCCCSS-CCCCCTTCEEEBSCC---CTTSCEEEEC--TTS---CEEEECGGG
T ss_pred EEEECcccCCCCCCC-CccCCCCCEEEEeEe---cCCCeEEEEe--CCC---CEEEEcHHH
Confidence 689999999987651 399999999999984 6778999863 223 589999975
No 358
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.13 E-value=1.4e-05 Score=99.74 Aligned_cols=128 Identities=15% Similarity=0.102 Sum_probs=91.0
Q ss_pred cccccC---CCCCCCCCCEEEEECCEeCCCCChH--------HHHHHHH--hcCCeEEEEEEeCCCCCcceEEEEEeccC
Q psy3835 755 LSALLN---NPPSYKVNDCIVRVNNLDCSNVSKR--------MVLETVR--SSGTSALMVIRRRRVGARSLVTTQLQLNN 821 (1659)
Q Consensus 755 V~~v~p---~~g~l~~GD~Il~VNg~~~~~~~~~--------~~~~~l~--~~~~~v~l~v~R~~~~~~~~~~~~i~~~~ 821 (1659)
|..|.| ++..|++||.|++|||+++.+.... ....++. ..|..|.|+|.|++.. ..+++++..
T Consensus 281 V~~V~~~spA~~al~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~----~~v~Vtl~~ 356 (539)
T 4fln_A 281 VRRVEPTSDASKVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEH----KKVQVVLRP 356 (539)
T ss_dssp EEEECTTSGGGGTCCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEE----EEEEEECBC
T ss_pred eecccCCChHHhCccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEE----EEEEEEEcc
Confidence 555665 5555999999999999999754320 1122333 3799999999998632 223333310
Q ss_pred -----------C-----CCcCeEe---------------------------------cCceEEEEeCCCChhhhcCCCCC
Q psy3835 822 -----------S-----YDHGLTL---------------------------------ESGLYICKISPGSLAAKEGSLAV 852 (1659)
Q Consensus 822 -----------~-----~~lG~~~---------------------------------~~gi~I~~v~~gs~A~~~g~L~~ 852 (1659)
. ...|+.+ ..|++|..|.|+++|...| +++
T Consensus 357 ~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g-~~~ 435 (539)
T 4fln_A 357 RVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYE-DMN 435 (539)
T ss_dssp CCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCS-SCC
T ss_pred CccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcC-CCC
Confidence 0 0134332 1368999999999999876 999
Q ss_pred CCEEEEeCCcccCCcccHHHHHHHHhcCC-CeEEEEEEc
Q psy3835 853 GDRVLSINNRTVDGLSSAREGMALLSDSP-DVLTITTLK 890 (1659)
Q Consensus 853 GD~Il~ing~~v~~~~~~~ea~~~l~~~~-~~v~l~v~r 890 (1659)
||.|++|||++|.+ ..+...+|+.+. ..+.|.+..
T Consensus 436 gdiI~~vNg~~V~s---~~~l~~~l~~~k~~~l~~~~~~ 471 (539)
T 4fln_A 436 NQQVLKFNGIPIRN---IHHLAHLIDMCKDKYLVFEFED 471 (539)
T ss_dssp SEEEEEETTEECCS---HHHHHHHHHTCCSSEEEEEETT
T ss_pred CCEEEeECCEEcCC---HHHHHHHHHHcCCCeEEEEECC
Confidence 99999999999999 888999999987 677776543
No 359
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=98.13 E-value=2.5e-06 Score=79.30 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=47.6
Q ss_pred CCcceeeecccc-CCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSR-TGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y-~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...++++|+|+| .+..++ +|+|++|||+.|++. .+.+||++...+.+......|++|+.+.
T Consensus 16 ~~~~~~~Alydy~~a~~~~--eLsf~~GDiI~V~~~---~~~gWw~G~~~~~~~~tg~~G~fPsnyV 77 (83)
T 2ke9_A 16 RGSLKVRALKDFWNLHDPT--ALNVRAGDVITVLEQ---HPDGRWKGHIHESQRGTDRIGYFPPGIV 77 (83)
T ss_dssp -CCEEEEESSCBCCCSCTT--BCCBCTTCEEEESCS---SCSSCEEEEECCSSTTSCCCEEECGGGE
T ss_pred CCCeEEEEccccCCCCCCC--cccccCCCEEEEEEe---cCCCeEEEEECCCCCCCCCEEEechHHE
Confidence 356789999999 677656 899999999999984 5678999986543333357999998753
No 360
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=98.13 E-value=1.4e-06 Score=77.01 Aligned_cols=55 Identities=33% Similarity=0.538 Sum_probs=45.6
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ +|+|++||++.|++. .+.+||++... + ...|+||+...
T Consensus 2 ~~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~---~~~~Ww~g~~~--~---g~~G~~P~~yv 56 (65)
T 1b07_A 2 SAEYVRALFDFNGNDEE--DLPFKKGDILRIRDK---PEEQWWNAEDS--E---GKRGMIPVPYV 56 (65)
T ss_dssp CCCEEEESSCBCCSSTT--BCCBCTTCEEEEEEC---SSSSEEEEECT--T---SCEEEEEGGGE
T ss_pred CceEEEECCcCCCCCCC--ccCCcCCCEEEEEEe---cCCCeEEEEEC--C---CCEEEEChHHE
Confidence 35689999999998877 899999999999994 56899999743 2 35899999864
No 361
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=98.11 E-value=2.2e-06 Score=78.44 Aligned_cols=57 Identities=14% Similarity=0.362 Sum_probs=47.4
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+|+|.+..++ +|+|++||||+|++ +.+.+||+++..+..| ..|+||+.+.
T Consensus 9 ~~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~---~~~~~Ww~g~~~~~~g---~~G~~P~~yv 65 (76)
T 2ed1_A 9 KVRRVKTIYDCQADNDD--ELTFIEGEVIIVTG---EEDQEWWIGHIEGQPE---RKGVFPVSFV 65 (76)
T ss_dssp CCEEEEESSCCCCSSSS--BCCCCSSCEEEESS---CCSSSEEEEEETTCTT---CEEEEEGGGE
T ss_pred CCeEEEECccCCCCCcC--CcCcCCCCEEEEEE---ecCCCEEEEEECCCCC---CEEEEehHHe
Confidence 56789999999998877 89999999999998 4678899998644333 5899999864
No 362
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=98.10 E-value=2.4e-06 Score=76.39 Aligned_cols=61 Identities=25% Similarity=0.314 Sum_probs=48.7
Q ss_pred CCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1329 PGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
|...++++|+|+|.+..++ .|+|++||++.|++. .+.+||++...+. |.....|++|+.+.
T Consensus 4 p~~~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~---~~~~Ww~g~~~~~-g~~~~~G~fP~~yv 64 (68)
T 1tg0_A 4 PEVPFKVVAQFPYKSDYED--DLNFEKDQEIIVTSV---EDAEWYFGEYQDS-NGDVIEGIFPKSFV 64 (68)
T ss_dssp CCSSEEEEESSCBCCSCTT--BCCBCTTCEEEEEEE---CSSSEEEEEEECT-TSCEEEEEEEGGGE
T ss_pred CCCCEEEEECeeECcCCcC--CCCCCCCCEEEEEEe---cCCCeEEEEECCC-CCCCEEEEEchHHE
Confidence 4466799999999998877 899999999999984 6778999987653 21226899998753
No 363
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.09 E-value=2.2e-06 Score=77.53 Aligned_cols=61 Identities=21% Similarity=0.295 Sum_probs=47.9
Q ss_pred CCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1329 PGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+....+++|+|+|.+..++ +|+|++||+|+| +. .+.+||++...+.+|.....|+||+.+.
T Consensus 7 ~~~~~~~~alydy~~~~~~--eLs~~~Gd~i~v-~~---~~~~Ww~g~~~~~~g~~~~~G~~P~~yv 67 (72)
T 2kgt_A 7 AHLGPKYVGLWDFKSRTDE--ELSFRAGDVFHV-AR---KEEQWWWATLLDEAGGAVAQGYVPHNYL 67 (72)
T ss_dssp SSCCCEEECCTTCBCSSTT--SCBCCTTCCEEE-EE---ECSSCEEEEEECTTSCEEEEEEECTTTS
T ss_pred CCCCcEEEEcccCCCCCcC--CcCCCCCCEEEE-ee---CCCCEEEEEEcCCCCCEeCCcEEcHhHE
Confidence 3456789999999998877 899999999999 74 5788999988754343222399999864
No 364
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.07 E-value=1.9e-06 Score=81.78 Aligned_cols=57 Identities=25% Similarity=0.385 Sum_probs=47.9
Q ss_pred ceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcC--CCCeEEEEEEeCcc
Q psy3835 1261 GIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK--PADKVTVLAQYSVE 1320 (1659)
Q Consensus 1261 gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~--~~~~v~L~v~r~~~ 1320 (1659)
|++|..|.++|||++ ||++||+|++|||.++.++. +....+.. .+..+.|+|.|+..
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~ 60 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSAE--KLIDYISSKKAGDKVTLKIEREEK 60 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSHH--HHHHHHSSCCSSCEECEEEESSSC
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCHH--HHHHHHHcCCCCCEEEEEEEECCE
Confidence 788999999999999 99999999999999998765 44444554 47899999999754
No 365
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.07 E-value=7.7e-06 Score=78.20 Aligned_cols=61 Identities=25% Similarity=0.296 Sum_probs=50.1
Q ss_pred CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1259 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1259 ~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
..|++|..|.++|||++ ||++||+|++|||.++.++.....+..-...+..+.|+|.|+..
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~ 64 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRK 64 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTE
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 35899999999999999 99999999999999998876554433322368899999999754
No 366
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.07 E-value=5.9e-06 Score=77.80 Aligned_cols=59 Identities=19% Similarity=0.274 Sum_probs=49.2
Q ss_pred CcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHH--hCCCeEEEEEEecCC
Q psy3835 1151 GGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLR--QCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1151 ~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~--~~~~~v~l~v~r~~~ 1211 (1659)
.|+.|..+.|+|||+++||++||.|++|||.++.++.... .++. ..+..+.|.|.|++.
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~--~~~~~~~~g~~v~l~v~R~g~ 79 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMN--TLFQSMNEMTEMSLTVERDGQ 79 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHH--HHHHTGGGCSEEEEEEEETTE
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHH--HHHHhcCCCCEEEEEEEECCE
Confidence 4788999999999999999999999999999999875543 3443 357899999999875
No 367
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.05 E-value=3.6e-06 Score=79.23 Aligned_cols=61 Identities=20% Similarity=0.273 Sum_probs=49.6
Q ss_pred cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1260 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1260 ~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
.|+.|..+.|+|+|+++||++||+|++|||+++.++.....+......++.+.|.|.|+..
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~ 79 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQ 79 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTE
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 4888999999999999999999999999999999887655333222357899999998753
No 368
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.05 E-value=9.3e-06 Score=83.12 Aligned_cols=60 Identities=23% Similarity=0.236 Sum_probs=50.7
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh--CCCeEEEEEEecCCc
Q psy3835 1150 SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ--CGNSITMLVQYSPDK 1212 (1659)
Q Consensus 1150 ~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~~ 1212 (1659)
..|++|..|.++|||+ +||++||.|++|||.++.++.. ....+.. +|..++|+|.|++..
T Consensus 56 ~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~ 117 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTD--LQSALYNHSIGDTIKITYYRNGKE 117 (134)
T ss_dssp CSCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCHHH--HHHHHHHSSTTCEEEEEEEETTEE
T ss_pred CCCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCHHH--HHHHHHhCCCCCEEEEEEEECCEE
Confidence 4689999999999999 9999999999999999998754 3444443 588999999998763
No 369
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.04 E-value=1.1e-05 Score=82.57 Aligned_cols=61 Identities=20% Similarity=0.180 Sum_probs=51.0
Q ss_pred CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1259 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1259 ~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
..|++|..|.+||||+ +||++||+|++|||.++.++........-...++.+.|+|.|+..
T Consensus 56 ~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~ 116 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGK 116 (134)
T ss_dssp CSCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEETTE
T ss_pred CCCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 3589999999999999 999999999999999999886655443333468899999999754
No 370
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=98.04 E-value=2.9e-06 Score=75.42 Aligned_cols=54 Identities=20% Similarity=0.410 Sum_probs=44.9
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+|+|.+..++ +|+|++||+|.|++. +.+||++... + +..|+||+...
T Consensus 3 ~~~~~~Alydy~a~~~~--ELsf~~Gd~i~vl~~----~~~Ww~~~~~--~---g~~G~~Psnyv 56 (67)
T 2b86_A 3 EEVIVIAKWDYTAQQDQ--ELDIKKNERLWLLDD----SKTWWRVRNA--A---NRTGYVPSNYV 56 (67)
T ss_dssp CCEEEEESSCBCCSSTT--SCCBCTTCEEEEEEC----SSSSCEEECT--T---SCEEECCCCSE
T ss_pred CCeEEEEeeeECCCCCC--ccccCCCCEEEEEec----CCCeEEEEeC--C---CCEEEeChHHE
Confidence 35689999999998877 999999999999994 4689999754 2 35899999864
No 371
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=98.03 E-value=3.9e-06 Score=72.38 Aligned_cols=54 Identities=28% Similarity=0.541 Sum_probs=44.9
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
..-+++|+++|.+..++ .|+|++||++.|++. .+.+||.+.. + ...|++|+...
T Consensus 2 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 55 (58)
T 1zlm_A 2 QVKVFRALYTFEPRTPD--ELYFEEGDIIYITDM---SDTNWWKGTS---K---GRTGLIPSNYV 55 (58)
T ss_dssp CCEEEEESSCBCCSSTT--BCCBCTTCEEEEEEC---CSSSEEEEEE---T---TEEEEEEGGGE
T ss_pred CcEEEEECccCCCCCCC--CccCCCCCEEEEEEe---CCCCEEEEEE---C---CCEEEEehHHE
Confidence 34579999999998766 999999999999985 5678999975 2 35899998764
No 372
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=98.03 E-value=3.9e-06 Score=72.35 Aligned_cols=53 Identities=26% Similarity=0.598 Sum_probs=44.7
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
...+++|+++|.+..++ +|+|++||+++|++. .+.+||++.. + ...|++|+..
T Consensus 2 p~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~W~~g~~---~---g~~G~~P~~y 54 (58)
T 2drm_A 2 PGIQVKALYDYDAQTGD--ELTFKEGDTIIVHQK---DPAGWWEGEL---N---GKRGWVPANY 54 (58)
T ss_dssp CCEEEEESSCBCCCSTT--BCCBCTTCEEEEEEC---CTTSEEEEEE---T---TEEEEEEGGG
T ss_pred CCcEEEECccCCCCCcC--CcCCCCCCEEEEEEe---cCCCEEEEEE---C---CcEEEEeHHH
Confidence 45679999999998877 899999999999985 5678999976 2 3689999875
No 373
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=98.02 E-value=4.2e-06 Score=73.82 Aligned_cols=55 Identities=27% Similarity=0.466 Sum_probs=45.8
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...++++|+++|.+..++ .|+|++||++.|+.. .+.+||.++. + ...|++|+...
T Consensus 4 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 58 (64)
T 2ak5_A 4 NSQLVVRAKFNFQQTNED--ELSFSKGDVIHVTRV---EEGGWWEGTH---N---GRTGWFPSNYV 58 (64)
T ss_dssp CCCCEEEESSCBCCCSTT--BCCBCTTCEEEEEEC---CTTSEEEEEE---T---TEEEEEEGGGE
T ss_pred CCCEEEEEccccCCcCcC--cccCCCCCEEEEeEe---cCCCEEEEEE---C---CCEEEEehHHe
Confidence 356789999999998766 999999999999984 5678999975 2 35899998753
No 374
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A
Probab=98.01 E-value=1.5e-06 Score=84.67 Aligned_cols=60 Identities=17% Similarity=0.213 Sum_probs=48.3
Q ss_pred CCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHH
Q psy3835 1329 PGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKV 1396 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~ 1396 (1659)
|...+|++|+|+|.+..++ +|+|++||++.|++. .+.+||++...+. ....|+||+.+..
T Consensus 2 p~~~~~~~Alydy~a~~~~--ELsf~~Gd~i~vl~~---~~~~Ww~g~~~g~---~g~~G~fPsnYV~ 61 (108)
T 2rqv_A 2 PLGSLYAIVLYDFKAEKAD--ELTTYVGENLFICAH---HNCEWFIAKPIGR---LGGPGLVPVGFVS 61 (108)
T ss_dssp CCSCCCEEESSCCCCCSSS--BCCCCSSEEECCCCE---ETTTEEEECCSSS---SCCCEEEESTTCB
T ss_pred CCCCeEEEECCCcCCCCCC--cCCcCCCCEEEEeEe---cCCCEEEEEECCc---cCCeeEeecceEE
Confidence 3467899999999999877 899999999999984 5778999876332 2357999998653
No 375
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.01 E-value=9.9e-06 Score=78.42 Aligned_cols=61 Identities=23% Similarity=0.244 Sum_probs=49.8
Q ss_pred CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1259 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1259 ~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
..|++|..|.++|||+. ||++||+|++|||.++.++.....+..-...+..+.|+|.|+..
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~ 66 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDK 66 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 35999999999999996 99999999999999999876554443322367899999998754
No 376
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=98.01 E-value=0.00092 Score=70.39 Aligned_cols=71 Identities=20% Similarity=0.211 Sum_probs=49.0
Q ss_pred chhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3835 283 NSSTQTMPLYVRQHNETVRRGDHTLKELEYYRGQHQAAMAQLEAAAQESSSLRSKYSDLISDKQRLDRELLELR 356 (1659)
Q Consensus 283 ~~~~~Ele~L~~q~~E~~~rl~~le~El~~l~~~l~el~~~l~~lk~e~~~l~~e~~el~~e~~~Le~el~~lk 356 (1659)
++...++.-++....++..++..++.+++.++....++..+++ .++..++.+..++......|..++..++
T Consensus 6 ~s~~ee~~ywk~~~~~~~q~~~~le~El~EFqesSrELE~ELE---~eL~~~Ek~~~~L~~~~~~L~~E~e~~k 76 (189)
T 2v71_A 6 SSLKEETAYWKELSMKYKQSFQEARDELVEFQEGSRELEAELE---AQLVQAEQRNRDLQADNQRLKYEVEALK 76 (189)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777788888888888888888888888777766665543 4556666666666666666666655554
No 377
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.00 E-value=9.2e-06 Score=78.64 Aligned_cols=59 Identities=20% Similarity=0.345 Sum_probs=49.7
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh--CCCeEEEEEEecCC
Q psy3835 1150 SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ--CGNSITMLVQYSPD 1211 (1659)
Q Consensus 1150 ~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~ 1211 (1659)
..|++|..|.++|||+. ||++||.|++|||.++.++.. +...+.. .+..+.|+|.|++.
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~d--l~~~l~~~~~g~~v~l~v~R~g~ 66 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQE--FIDYIHSKKVGDTVKINYKHGDK 66 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHH--HHHHHHTSCTTCEEEEEEEETTE
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHH--HHHHHHhCCCCCEEEEEEEECCE
Confidence 46899999999999995 999999999999999987644 4455543 57899999999775
No 378
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.98 E-value=6e-06 Score=72.26 Aligned_cols=54 Identities=22% Similarity=0.292 Sum_probs=44.9
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ .|+|++||++.|++. .+.+||.+.. + ...|++|+...
T Consensus 4 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 57 (62)
T 1k4u_S 4 KGSQVEALFSYEATQPE--DLEFQEGDIILVLSK---VNEEWLEGES---K---GKVGIFPKVFV 57 (62)
T ss_dssp CCEEEECCSCBCCCSSS--BCCBCSSCEEEEEEE---SSSSCEEEEC---S---SCEEEECGGGC
T ss_pred CCeEEEECCCCCcCCCC--CccCCCCCEEEEEEe---CCCCEEEEEE---C---CcEEEEeHHHE
Confidence 45689999999998777 899999999999995 5678999972 2 35899998753
No 379
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=97.98 E-value=5.3e-06 Score=71.54 Aligned_cols=52 Identities=29% Similarity=0.601 Sum_probs=43.9
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
..+++|+++|.+..++ .|+|++||++.|+.. .+.+||++.. + ...|+||+..
T Consensus 2 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~y 53 (58)
T 1sem_A 2 TKFVQALFDFNPQESG--ELAFKRGDVITLINK---DDPNWWEGQL---N---NRRGIFPSNY 53 (58)
T ss_dssp CCEEEESSCBCCSSTT--BCCBCTTCEEEEEEC---SSSSEEEEEE---T---TEEEEEEGGG
T ss_pred CeEEEECcCCCCCCCC--CcCCCCCCEEEEEEe---cCCCEEEEEE---C---CcEEEechHH
Confidence 3578999999998766 999999999999995 5678999986 2 3689999875
No 380
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=97.97 E-value=5.4e-06 Score=71.48 Aligned_cols=52 Identities=25% Similarity=0.521 Sum_probs=43.7
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
.|++|+++|.+..++ +|+|++||++.|++. .+.+||.+.. + ...|++|+...
T Consensus 2 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 53 (58)
T 1uti_A 2 RWARALYDFEALEED--ELGFRSGEVVEVLDS---SNPSWWTGRL---H---NKLGLFPANYV 53 (58)
T ss_dssp CEEEESSCBCCCSTT--BCCBCTTCEEEEEEC---CSSSEEEEEE---T---TEEEEEEGGGE
T ss_pred eEEEECccCCCCCcC--CCCCCCCCEEEEEEE---CCCCEEEEEE---C---CeEEEeeHHHe
Confidence 378999999998766 999999999999984 5788999976 2 35899998753
No 381
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=97.97 E-value=3.5e-06 Score=73.27 Aligned_cols=54 Identities=22% Similarity=0.430 Sum_probs=44.3
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
+...+++|+++|.+..++ .|+|++||++.|++. .+.+||.+.. + ...|++|+..
T Consensus 4 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~y 57 (60)
T 2gnc_A 4 GSPEFAIAKFDYVGRSAR--ELSFKKGASLLLYHR---ASEDWWEGRH---N---GIDGLVPHQY 57 (60)
T ss_dssp --CEEEEESSCBCCSSTT--BCCBCTTCEEEEEEE---EETTEEEEEE---T---TEEEEEEGGG
T ss_pred CCCEEEEECCCCCcCCcC--CcCCCCCCEEEEEEe---cCCCEEEEEE---C---CeEEEEeHhh
Confidence 456789999999998766 899999999999984 4678999976 2 3689999875
No 382
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=97.97 E-value=6.2e-06 Score=72.17 Aligned_cols=57 Identities=25% Similarity=0.314 Sum_probs=46.2
Q ss_pred CCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1329 PGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+.+..+++|+++|.+..++ +|+|++||++.|++. +.+||++.... + ...|++|+...
T Consensus 3 p~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~----~~~Ww~g~~~~-~---g~~G~~P~~yv 59 (62)
T 2iim_A 3 PLQDNLVIALHSYEPSHDG--DLGFEKGEQLRILEQ----SGEWWKAQSLT-T---GQEGFIPFNFV 59 (62)
T ss_dssp TTTTCEEEESSCBCCCSTT--BCCBCTTCEEEEEEC----CSSEEEEEETT-T---CCEEEEEGGGE
T ss_pred CCCCcEEEEcccCCCCCCC--CcCCCCCCEEEEEEc----CCCEEEEEECC-C---CCEEEEEHHHE
Confidence 4567789999999998776 999999999999995 34899997642 2 35899998753
No 383
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=97.96 E-value=4.3e-06 Score=71.83 Aligned_cols=51 Identities=35% Similarity=0.606 Sum_probs=43.0
Q ss_pred eeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1334 YMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1334 yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
|++|+++|.+..++ .|+|++||++.|++. .+.+||++...+ ...|++|+..
T Consensus 3 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~~-----g~~G~~P~~y 53 (57)
T 1cka_A 3 YVRALFDFNGNDEE--DLPFKKGDILRIRDK---PEEQWWNAEDSE-----GKRGMIPVPY 53 (57)
T ss_dssp EEEESSCBCCSSTT--BCCBCTTCEEEEEEC---SSSSEEEEECTT-----SCEEEEEGGG
T ss_pred EEEECCcCCCCCCC--CCCCCCCCEEEEEEe---cCCCcEEEEeCC-----CCEEEEeHHH
Confidence 68999999998776 899999999999984 567899997432 3589999875
No 384
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.96 E-value=7.4e-06 Score=75.14 Aligned_cols=60 Identities=33% Similarity=0.494 Sum_probs=47.2
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCc---ccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFR---QQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~---~~~GlIPs~~~ 1395 (1659)
...|++|+|+|.+..++ +|+|++||+|+|++. .+.+||+++..+..|.. ...|+||+.+.
T Consensus 6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv 68 (77)
T 2d8j_A 6 SGQYFVALFDYQARTAE--DLSFRAGDKLQVLDT---SHEGWWLARHLEKKGTGLGQQLQGYIPSNYV 68 (77)
T ss_dssp CCEEEEESSCBCCSSSS--BCCBCTTCCEEEEEC---CSSSEEEEEECSSCCSSCCCCSEEEEETTTE
T ss_pred CCCEEEEccCCCCCCCC--ccCCCCCCEEEEEEC---CCCCeEEEEECCCCCcCcccCCceEECHHHe
Confidence 34589999999998877 899999999999994 57889999887532321 12399999864
No 385
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=97.96 E-value=5.7e-06 Score=71.33 Aligned_cols=51 Identities=27% Similarity=0.558 Sum_probs=43.5
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
.+++|+++|.+..++ +|+|++||++.|+.. .+.+||.+.. + ...|++|+..
T Consensus 3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~y 53 (58)
T 2vwf_A 3 TYVQALFDFDPQEDG--ELGFRRGDFIHVMDN---SDPNWWKGAC---H---GQTGMFPRNY 53 (58)
T ss_dssp CEEEESSCBCCCSTT--BCCBCTTCEEEEEEC---CSSSEEEEEE---T---TEEEEEEGGG
T ss_pred eEEEECceECCCCcC--CcCCCCCCEEEEEEc---CCCCEEEEEE---C---CcEEEEchHH
Confidence 478999999998776 899999999999984 5678999987 3 3589999875
No 386
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=97.95 E-value=5.6e-06 Score=73.85 Aligned_cols=53 Identities=19% Similarity=0.338 Sum_probs=44.7
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
..+++|+++|.+..++ +|+|++||++.|++. .+.+||.+.. + +..|+||+...
T Consensus 3 ~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 55 (68)
T 2ew3_A 3 QPCCRGLYDFEPENQG--ELGFKEGDIITLTNQ---IDENWYEGMI---H---GESGFFPINYV 55 (68)
T ss_dssp CCEEEESSCBCCCSTT--BCCBCTTCEEEEEEE---SSSSEEEEEE---T---TEEEEEEGGGE
T ss_pred CCEEEEeeeECCCCCC--ccCCCCCCEEEEEEe---cCCCEEEEEE---C---CcEEEeeHHHE
Confidence 4579999999998777 999999999999994 5678999975 3 36899999864
No 387
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=97.94 E-value=5.4e-06 Score=73.33 Aligned_cols=56 Identities=21% Similarity=0.394 Sum_probs=45.0
Q ss_pred eeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEecc-CCCc-ccccCcCChh
Q psy3835 1334 YMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDA-DGFR-QQCGIIPSKY 1394 (1659)
Q Consensus 1334 yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~-~~~~-~~~GlIPs~~ 1394 (1659)
+++|+++|.+..++ .|+|++||++.|+.. .+.+||+++.... +|.. ...|+||+..
T Consensus 3 ~~~alydy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~~~~~g~~~g~~G~~P~~y 60 (65)
T 2oaw_A 3 LVLALYDYQEKSPR--EVTMKKGDILTLLNS---TNKDWWKVEVKITVNGKTYERQGFVPAAY 60 (65)
T ss_dssp EEEECSCBCCSSTT--BCCBCTTCEEEEEEC---CSSSEEEEEEEEEETTEEEEEEEEEEGGG
T ss_pred EEEEcccCCccCCC--CCCCCCCCEEEEEEc---CCCCEEEEEEccccCCCcCCcEEEEchHH
Confidence 68999999998766 999999999999994 5788999987732 2211 4689999875
No 388
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=97.94 E-value=0.0016 Score=68.51 Aligned_cols=27 Identities=15% Similarity=0.193 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3835 307 LKELEYYRGQHQAAMAQLEAAAQESSS 333 (1659)
Q Consensus 307 e~El~~l~~~l~el~~~l~~lk~e~~~ 333 (1659)
+.++..++..+.+...++..++.++..
T Consensus 9 ~ee~~ywk~~~~~~~q~~~~le~El~E 35 (189)
T 2v71_A 9 KEETAYWKELSMKYKQSFQEARDELVE 35 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444333333333333
No 389
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=97.93 E-value=6.7e-06 Score=71.46 Aligned_cols=53 Identities=26% Similarity=0.512 Sum_probs=44.6
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
...+++|+++|.+..++ +|+|++||++.|++. .+.+||.++. + ...|++|+..
T Consensus 4 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~y 56 (60)
T 2xmf_A 4 GSPQCKALYAYDAQDTD--ELSFNANDIIDIIKE---DPSGWWTGRL---R---GKQGLFPNNY 56 (60)
T ss_dssp CSCEEEESSCBCCSSTT--BCCBCTTCEEEEEEE---CTTSEEEEEE---T---TEEEEEEGGG
T ss_pred CCcEEEECccCCcCCcC--CcCCCCCCEEEEEEe---cCCCEEEEEE---C---CEEEEEcHHH
Confidence 35679999999998766 899999999999995 5678999986 2 3589999875
No 390
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.93 E-value=6.9e-06 Score=74.91 Aligned_cols=57 Identities=18% Similarity=0.219 Sum_probs=44.9
Q ss_pred CcceeeeccccCCCCCc-----cccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGD-----ALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~-----~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+|+|.+..+. +.+|+|++|||++|+.. ..+.+||++.. + ...|+||+.+.
T Consensus 6 ~~~~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~--~~~~gWw~g~~---~---g~~G~fP~~yv 67 (75)
T 2ege_A 6 SGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGP--MDDQGFYYGEL---G---GHRGLVPAHLL 67 (75)
T ss_dssp CSEEEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEESC--CCTTCEEEEES---S---SCEEEEETTTE
T ss_pred CCcEEEECCCCCCCccccCCCCCCcceECCCCEEEEeEc--cCCCCEEEEEE---C---CcEEEEChHHe
Confidence 45689999999998721 34999999999999962 25778999864 3 35899999864
No 391
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=97.93 E-value=6.1e-06 Score=71.15 Aligned_cols=52 Identities=19% Similarity=0.337 Sum_probs=43.5
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
-+++|+++|.+..++ +|+|++||++.|++. .+.+||.+.. + ...|++|+...
T Consensus 3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 54 (58)
T 1zx6_A 3 EYVEALYQFDPQQDG--DLGLKPGDKVQLLEK---LSPEWYKGSC---N---GRTGIFPANYV 54 (58)
T ss_dssp CEEEECSCBCCCSTT--BCCBCTTCEEEEEEE---CSSSEEEEEE---T---TEEEEEEGGGE
T ss_pred eEEEECceECCCCCC--CccCCCCCEEEEEEe---cCCCEEEEEE---C---CcEEEeeHHHE
Confidence 378999999998766 999999999999984 4678999985 3 35899998753
No 392
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=97.93 E-value=6.7e-06 Score=78.03 Aligned_cols=57 Identities=19% Similarity=0.374 Sum_probs=51.1
Q ss_pred CceEEEEeCCCChhhhcCCCCCCCEEEEeCCcccCCcccHHHHHHHHhcC--CCeEEEEEEccC
Q psy3835 831 SGLYICKISPGSLAAKEGSLAVGDRVLSINNRTVDGLSSAREGMALLSDS--PDVLTITTLKPT 892 (1659)
Q Consensus 831 ~gi~I~~v~~gs~A~~~g~L~~GD~Il~ing~~v~~~~~~~ea~~~l~~~--~~~v~l~v~r~~ 892 (1659)
.|++|..|.|||||++ | |++||.|++|||.++.+ +.++..+|... +..+.|+|.|..
T Consensus 1 ~Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~---~~~l~~~l~~~~~g~~v~l~v~R~g 59 (91)
T 2kjp_A 1 NGIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS---AEKLIDYISSKKAGDKVTLKIEREE 59 (91)
T ss_dssp CCSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS---HHHHHHHHSSCCSSCEECEEEESSS
T ss_pred CceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC---HHHHHHHHHcCCCCCEEEEEEEECC
Confidence 3788999999999998 6 99999999999999998 78899999886 478999999875
No 393
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.92 E-value=7.2e-06 Score=78.37 Aligned_cols=60 Identities=20% Similarity=0.362 Sum_probs=50.9
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh--CCCeEEEEEEecCCc
Q psy3835 1150 SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ--CGNSITMLVQYSPDK 1212 (1659)
Q Consensus 1150 ~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~~ 1212 (1659)
..|++|..|.++|||++ ||++||.|++|||.++.++. ++...+.. ++..+.|.|.|++..
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~ 65 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSE--QIVSYVREKQAGDRVRVTFIRDRKQ 65 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHH--HHHHHHHHSCTTCCEEEEEEETTEE
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHH--HHHHHHHhCCCCCEEEEEEEECCEE
Confidence 46899999999999999 99999999999999998764 44555554 588999999998763
No 394
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=97.92 E-value=7.5e-06 Score=71.12 Aligned_cols=54 Identities=26% Similarity=0.433 Sum_probs=43.9
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
..+++|+++|.+..++ .|+|++||++.|+.... .+.+||.++. + ...|++|+..
T Consensus 3 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~-~~~~Ww~g~~---~---g~~G~~P~~y 56 (60)
T 1oot_A 3 SPKAVALYSFAGEESG--DLPFRKGDVITILKKSD-SQNDWWTGRV---N---GREGIFPANY 56 (60)
T ss_dssp CCEEEESSCBCCCSTT--BCCBCTTCEEEEEECCS-CTTSEEEEEE---T---TEEEEEEGGG
T ss_pred ccEEEECccCCcCCcC--EeeEcCCCEEEEEEeCC-CCCCeEEEEE---C---CEEEEEeHHH
Confidence 4579999999998766 89999999999998521 2678999976 2 3589999875
No 395
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=97.92 E-value=0.00096 Score=75.94 Aligned_cols=13 Identities=15% Similarity=0.164 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHH
Q psy3835 574 RDKALKECNDLRE 586 (1659)
Q Consensus 574 ~~~aieE~e~l~e 586 (1659)
-..+...|+.++.
T Consensus 174 ~~~lL~~Yerir~ 186 (256)
T 3na7_A 174 EPKIYSFYERIRR 186 (256)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4455666766654
No 396
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.91 E-value=2.2e-05 Score=77.77 Aligned_cols=59 Identities=19% Similarity=0.288 Sum_probs=51.5
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEecCC
Q psy3835 1150 SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1150 ~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 1211 (1659)
..|++|..|.++|||+++||++||.|++|||.++.+ ..++...+.. +..+.|+|.|++.
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~v~R~g~ 92 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGRE 92 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHHHH-CSSEEEEEEETTE
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEEEEECCE
Confidence 468999999999999999999999999999999986 4556666666 7889999999775
No 397
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=97.91 E-value=7.4e-06 Score=70.62 Aligned_cols=52 Identities=21% Similarity=0.327 Sum_probs=43.2
Q ss_pred eeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1334 YMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1334 yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
+++|+++|.+..++ .|+|++||+++|+.. .+.+||.+.... + ...|++|+..
T Consensus 2 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~~-~---g~~G~~P~~y 53 (58)
T 1jo8_A 2 WATAEYDYDAAEDN--ELTFVENDKIINIEF---VDDDWWLGELEK-D---GSKGLFPSNY 53 (58)
T ss_dssp CEEESSCBCCCSTT--BCCBCTTCEEEEEEC---CSSSEEEEEETT-T---CCEEEEEGGG
T ss_pred EEEECceECCCCCC--CcccCCCCEEEEEEe---cCCCcEEEEECC-C---CCEEEechHH
Confidence 57999999998776 899999999999994 567899987642 2 3589999875
No 398
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=97.91 E-value=7.1e-06 Score=71.81 Aligned_cols=54 Identities=19% Similarity=0.345 Sum_probs=44.8
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ +|+|++||++.|++. .+.+||++... ...|+||+...
T Consensus 4 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~------g~~G~~P~~yv 57 (62)
T 1uj0_A 4 MARRVRALYDFEAVEDN--ELTFKHGELITVLDD---SDANWWQGENH------RGTGLFPSNFV 57 (62)
T ss_dssp CCEEEEESSCBCCCSTT--BCCBCTTCEEEEEEC---CSSSEEEEEET------TEEEEEEGGGE
T ss_pred CCeEEEECccCCCCCcC--CcCCCCCCEEEEEEe---CCCCEEEEEEC------CCEEEechhHE
Confidence 35689999999998876 899999999999984 56789998752 24899998754
No 399
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}
Probab=97.91 E-value=6.7e-06 Score=82.20 Aligned_cols=57 Identities=16% Similarity=0.213 Sum_probs=47.9
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHH
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKV 1396 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~ 1396 (1659)
.+|++|+|+|.+..++ +|+|++||++.|++. .+.+||+++..+..| ..|++|+.+..
T Consensus 3 ~~~~~Alydy~a~~~~--ELsf~~Gd~i~vl~~---~~~~Ww~g~~~~~~g---~~G~~P~nyv~ 59 (120)
T 2kym_A 3 PLFAVTLYEFKAERDD--ELDVSPGENLSICAH---YDYEWFIAKPINRLG---GPGLVPVSYVR 59 (120)
T ss_dssp CCEEEECSCBCCCSTT--CCCBCTTCEEEEEEE---ETTTEEEEEESSSCS---CCCCEEGGGEE
T ss_pred CEEEEEcccCCCCCCC--ccCCCCCCEEEEEEe---cCCCEEEEEECCCCC---CEEEEchHHEE
Confidence 5789999999998877 899999999999984 677899998754444 58999998653
No 400
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=97.91 E-value=5.1e-06 Score=74.88 Aligned_cols=56 Identities=21% Similarity=0.443 Sum_probs=45.8
Q ss_pred CCCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1328 KPGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1328 ~~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
.+....+++|+|+|.+..++ +|+|++||+|.|++. .+.+||++..- ...|+||+.+
T Consensus 13 ~~~~~~~~~Alydy~a~~~~--eLsf~~Gd~i~Vl~~---~~~gWw~g~~~------g~~G~fP~~y 68 (72)
T 2l0a_A 13 HQHEARKVRAIYDFEAAEDN--ELTFKAGEIITVLDD---SDPNWWKGETH------QGIGLFPSNF 68 (72)
T ss_dssp SCCCCEEEEESSCBCCSSTT--BCCBCTTCEEEEEEE---EETTEEEEECS------SCEEECTTCC
T ss_pred CCCCCeEEEECCccCCCCCC--ccCCCCCCEEEEEEe---cCCCEEEEEEC------CCEEEechhh
Confidence 34466789999999998877 999999999999984 56789998642 2489999875
No 401
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=97.91 E-value=5.2e-06 Score=73.31 Aligned_cols=52 Identities=23% Similarity=0.452 Sum_probs=43.6
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
.+++|+++|.+..++ +|+|++||++.|++. .+.+||.+.. + +..|++|+.+.
T Consensus 2 ~~~~Alydy~~~~~~--eLs~~~Gd~i~v~~~---~~~gWw~g~~---~---g~~G~fP~~yv 53 (65)
T 2fei_A 2 RQCKVLFEYIPQNED--ELELKVGDIIDINEE---VEEGWWSGTL---N---NKLGLFPSNFV 53 (65)
T ss_dssp CEEECSSCCCCCSTT--BCCCCTTCEEECCCC---SSSSEEEEES---S---SCEEEEETTTS
T ss_pred eEEEECccCCcCCcC--ccCCCCCCEEEEEEe---cCCCEEEEEE---C---CcEEEecHHHE
Confidence 378999999998877 999999999999984 6788999963 2 35899999864
No 402
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=97.91 E-value=9.7e-06 Score=71.44 Aligned_cols=56 Identities=30% Similarity=0.630 Sum_probs=45.1
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
....+++|+++|.+..++ +|+|++||+++|+... ..+.+||.++. + ...|++|+..
T Consensus 4 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~~~~W~~g~~---~---g~~G~~P~~y 59 (64)
T 2jte_A 4 GAKEYCRTLFPYTGTNED--ELTFREGEIIHLISKE-TGEAGWWKGEL---N---GKEGVFPDNF 59 (64)
T ss_dssp CSSEEEEESSCBCCSSSS--BCCBCTTCEEEEEESC-SSSTTEEEEEE---T---TEEEEEEGGG
T ss_pred CCCEEEEECccCCccCCC--ccCCCCCCEEEEEECC-CCCCCEEEEEE---C---CeEEEEeHHH
Confidence 456789999999998776 9999999999999741 13678999974 2 3689999875
No 403
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=97.90 E-value=7.8e-06 Score=70.75 Aligned_cols=52 Identities=29% Similarity=0.469 Sum_probs=43.5
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
..+++|+++|.+..++ .|+|++||++.|++. .+.+||.+.. + ...|++|+..
T Consensus 4 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~y 55 (59)
T 2g6f_X 4 GSVVRAKFNFQQTNED--ELSFSKGDVIHVTRV---EEGGWWEGTH---N---GRTGWFPSNY 55 (59)
T ss_dssp CCEEEESSCBCCSSTT--BCCBCTTCEEEEEEE---CTTSEEEEEE---T---TEEEEEEGGG
T ss_pred CcEEEECceeCCCCcC--CcCCCCCCEEEEEEe---cCCCEEEEEE---C---CcEEEEeHHH
Confidence 3579999999998766 999999999999984 5678999975 2 3589999875
No 404
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.90 E-value=7.9e-06 Score=72.97 Aligned_cols=55 Identities=27% Similarity=0.540 Sum_probs=45.9
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+...+++|+++|.+..++ .|+|++||+++|++. .+.+||+++. + ...|+||+.+.
T Consensus 5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 59 (68)
T 1x2k_A 5 SSGKVFRALYTFEPRTPD--ELYFEEGDIIYITDM---SDTNWWKGTS---K---GRTGLIPSNYV 59 (68)
T ss_dssp CCSEEEEESSCCCCCSTT--BCCCCSSCEEEEEEC---SCSSEEEEES---S---SCEEEEETTTE
T ss_pred CCcEEEEECceECCCCCC--cccCCCCCEEEEEEc---CCCCEEEEEE---C---CcEEEEehHHe
Confidence 456789999999998776 999999999999985 5678999974 2 35899999864
No 405
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=97.90 E-value=6.7e-06 Score=71.43 Aligned_cols=52 Identities=21% Similarity=0.337 Sum_probs=44.0
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
.++++|+++|.+..++ +|+|++||++.|++. .+.+||.+.. + ...|++|+..
T Consensus 4 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~W~~g~~---~---g~~G~~P~~y 55 (60)
T 1w70_A 4 HMRAEALFDFTGNSKL--ELNFKAGDVIFLLSR---INKDWLEGTV---R---GATGIFPLSF 55 (60)
T ss_dssp SCEEEESSCBCCSSTT--BCCBCTTCEEEEEEE---CSSSEEEEEE---T---TEEEEEEGGG
T ss_pred CcEEEECccCCcCCCC--CccCCCCCEEEEEEe---CCCCeEEEEE---C---CCEEEechHH
Confidence 5689999999998877 899999999999995 4678999874 2 3589999875
No 406
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.89 E-value=1e-05 Score=73.40 Aligned_cols=57 Identities=23% Similarity=0.465 Sum_probs=46.0
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ +|+|++||+|+|++.....+.+||+++. + ...|+||+.+.
T Consensus 7 ~~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~---~---g~~G~~P~~yv 63 (73)
T 2dl7_A 7 GVCFVKALYDYEGQTDD--ELSFPEGAIIRILNKENQDDDGFWEGEF---N---GRIGVFPSVLV 63 (73)
T ss_dssp CCEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCCSSSSSCEEEEE---T---TEEEEECSSSE
T ss_pred CCEEEEECccCCcCCCC--cCCCCCCCEEEEEECCCCCCCCcEEEEE---C---CCEEEEChHHE
Confidence 45789999999998877 8999999999999853224778999973 2 35899999754
No 407
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=97.89 E-value=1.6e-05 Score=76.16 Aligned_cols=57 Identities=21% Similarity=0.194 Sum_probs=46.8
Q ss_pred EEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh-C-CCeEEEEEEecCC
Q psy3835 1153 VFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ-C-GNSITMLVQYSPD 1211 (1659)
Q Consensus 1153 v~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~-~~~v~l~v~r~~~ 1211 (1659)
.+|..|.++|||+++||++||.|++|||..+.++.. +...+.. . +..+.|.|.|++.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d--~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDA--VRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHH--HHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHH--HHHHHHHhcCCCcEEEEEEECCC
Confidence 368899999999999999999999999999998754 4444443 2 3689999999774
No 408
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=97.88 E-value=9.5e-06 Score=71.67 Aligned_cols=51 Identities=22% Similarity=0.321 Sum_probs=43.1
Q ss_pred eeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1334 YMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1334 yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+++|+++|.+..++ .|+|++||++.|++. .+.+||.+.. + +..|++|+.+.
T Consensus 3 ~~~alydy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~fP~~yv 53 (65)
T 2nwm_A 3 AARLKFDFQAQSPK--ELTLQKGDIVYIHKE---VDKNWLEGEH---H---GRLGIFPANYV 53 (65)
T ss_dssp EEEECSCBCCCSTT--BCCBCTTCEEEEEEC---CTTTCEEEEE---T---TEEEEECGGGE
T ss_pred EEEEeeeECCCCcC--ccCCcCCCEEEEEEe---cCCCEEEEEE---C---CcEEEEehhhE
Confidence 68999999998777 999999999999984 5688999973 2 35899999864
No 409
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.87 E-value=1.1e-05 Score=76.18 Aligned_cols=57 Identities=19% Similarity=0.332 Sum_probs=47.1
Q ss_pred CCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHH
Q psy3835 1329 PGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKV 1396 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~ 1396 (1659)
+....+++|+|+|.+..++ +|+|++||+|+|++. .+.+||++... ...|++|+.+..
T Consensus 14 ~~~~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~---~~~~Ww~g~~~------g~~G~~P~~yv~ 70 (88)
T 1x2q_A 14 NKVARKVRALYDFEAVEDN--ELTFKHGEIIIVLDD---SDANWWKGENH------RGIGLFPSNFVT 70 (88)
T ss_dssp CCCCEEEEESSCCCCCSSS--CCCCCSSCEEEEEEC---SCSSSEEEEET------TEEEEECGGGEE
T ss_pred CCCCeEEEEcccCCCCCcC--ccCCCCCCEEEEEEe---CCCCEEEEEEC------CcEEEEehHHEE
Confidence 3456789999999998877 899999999999984 57789999763 248999998643
No 410
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=97.87 E-value=9.5e-06 Score=72.58 Aligned_cols=53 Identities=23% Similarity=0.449 Sum_probs=43.4
Q ss_pred eeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1334 YMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1334 yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+++|+++|.+..++ +|+|++||++.|++... .+.+||++.. + ...|+||+...
T Consensus 4 ~~~Alydy~a~~~~--eLs~~~Gd~i~vl~~~~-~~~gWw~g~~---~---g~~G~~P~~yV 56 (69)
T 2ydl_A 4 YCKVIFPYEAQNDD--ELTIKEGDIVTLINKDC-IDVGWWEGEL---N---GRRGVFPDNFV 56 (69)
T ss_dssp EEEESSCBCCCSTT--BCCBCTTCEEEEEESCC-SSTTEEEEEE---T---TEEEEEEGGGE
T ss_pred EEEEcccCCCCCCC--ccccCCCCEEEEEEcCC-CCCCEEEEEE---C---CcEEEecHHHE
Confidence 68999999998877 99999999999998411 2678999974 3 35899999864
No 411
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=97.87 E-value=7.9e-06 Score=73.43 Aligned_cols=55 Identities=31% Similarity=0.580 Sum_probs=45.1
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
.++++|+++|.+..+++..|+|++||++.|++. +.+||+++.. + +..|+||+...
T Consensus 5 ~~~~~alydy~~~~~~~~eLsf~~Gd~i~v~~~----~~~Ww~g~~~--~---g~~G~~P~~yv 59 (70)
T 2vkn_A 5 IYKAKALYPYDADDDDAYEISFEQNEILQVSDI----EGRWWKARRA--N---GETGIIPSNYV 59 (70)
T ss_dssp EEEEEESSCBCCCSSSTTBCCBCTTCEEEEECT----TSSEEEEECT--T---SCEEEEEGGGE
T ss_pred CEEEEECccCCCCCCCCCcccCCCCCEEEEEEc----CCCeEEEEEC--C---CCEEEEehHHE
Confidence 478999999999875556999999999999983 5789998754 3 35899999864
No 412
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.87 E-value=7.8e-06 Score=73.92 Aligned_cols=56 Identities=23% Similarity=0.407 Sum_probs=46.5
Q ss_pred CCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1329 PGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+...++++|+++|.+..++ .|+|++||++.|+.. .+.+||.++. + ...|+||+.+.
T Consensus 6 ~~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 61 (72)
T 2dl8_A 6 SGEPIEAIAKFDYVGRTAR--ELSFKKGASLLLYQR---ASDDWWEGRH---N---GIDGLIPHQYI 61 (72)
T ss_dssp SCSCEEEEESSCBCCSSSS--BCCBCTTCEEEEEEE---EETTEEEEEE---T---TEEEEECSSSE
T ss_pred CCCCEEEEECccCCcCCCC--EeccCCCCEEEEEee---cCCCEEEEEE---C---CEEEEEchHHe
Confidence 3467899999999998766 899999999999984 4678999976 2 36899998764
No 413
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=97.87 E-value=7.2e-06 Score=73.47 Aligned_cols=56 Identities=29% Similarity=0.507 Sum_probs=44.9
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
.++++|+++|.+..++ +|+|++||+++|+......+.+||.++. + ...|++|+...
T Consensus 3 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~---~---g~~G~~P~~yv 58 (69)
T 1wyx_A 3 NVLAKALYDNVAESPD--ELSFRKGDIMTVLEQDTQGLDGWWLCSL---H---GRQGIVPGNRL 58 (69)
T ss_dssp EEEEEESSCBCCSSTT--BCCBCTTCEEEEEETTGGGCTTEEEEEE---T---TEEEEEEGGGE
T ss_pred CEEEEECccCCcCCCC--ccCCcCCCEEEEeECCCCCCCCcEEEEE---C---CcEEEechhhE
Confidence 4689999999998776 9999999999999852212678999973 2 35999999863
No 414
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=97.86 E-value=0.0011 Score=75.38 Aligned_cols=6 Identities=17% Similarity=0.252 Sum_probs=2.5
Q ss_pred ccceEE
Q psy3835 739 GTGTIL 744 (1659)
Q Consensus 739 glG~~i 744 (1659)
|+|+.-
T Consensus 190 g~avv~ 195 (256)
T 3na7_A 190 NTSIVT 195 (256)
T ss_dssp GGSEEE
T ss_pred CceEEE
Confidence 444433
No 415
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.86 E-value=2.7e-05 Score=76.07 Aligned_cols=61 Identities=18% Similarity=0.181 Sum_probs=49.7
Q ss_pred CcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEecCC
Q psy3835 1151 GGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1151 ~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 1211 (1659)
.|+.|..+.|+|||+++||++||.|++|||.++.++............+..+.|.|.|++.
T Consensus 37 ~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~ 97 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQ 97 (105)
T ss_dssp EEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETTE
T ss_pred EEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECCE
Confidence 3677888888899999999999999999999999987765332222457899999999875
No 416
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.86 E-value=1.2e-05 Score=74.31 Aligned_cols=59 Identities=15% Similarity=0.250 Sum_probs=47.7
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...|++|+++|.+..++ .|+|++||+++|+.. .+.+||++...+. |.....|++|+.+.
T Consensus 6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~gWw~g~~~~~-g~~~~~G~fP~~yv 64 (80)
T 1ue9_A 6 SGEIAQVTSAYVASGSE--QLSLAPGQLILILKK---NTSGWWQGELQAR-GKKRQKGWFPASHV 64 (80)
T ss_dssp CCEEEEECSCCCCCSTT--BCCCCTTCEEEEEEE---CSSSEEEEEECSC-CSSCCEEEEETTSE
T ss_pred CCeEEEECcccCCCCCC--CCCCCCCCEEEEEEe---cCCCcEEEEECCC-CCCCcEEEEchHHe
Confidence 45689999999998766 899999999999984 5688999987642 22246999999864
No 417
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=97.86 E-value=1.2e-05 Score=72.90 Aligned_cols=56 Identities=27% Similarity=0.423 Sum_probs=45.9
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+|+|.+..++ +|+|++||+++|++. .+.+||+++.... ...|+||+.+.
T Consensus 14 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~~~----g~~G~~P~~yv 69 (73)
T 3h0h_A 14 GVTLFVALYDYEAITED--DLSFHKGEKFQILNS---SEGDWWEARSLTT----GETGYIPSNYV 69 (73)
T ss_dssp TTCEEEESSCBCCSSTT--BCCBCTTCEEEEEEC---SSSSEEEEEETTT----CCEEEEEGGGE
T ss_pred CCEEEEECccCCCCCCC--cceEeCCCEEEEEEe---cCCCeEEEEECCC----CCEEEEEHHHe
Confidence 45688999999998776 999999999999984 5678999987532 25899998753
No 418
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=97.86 E-value=9.9e-06 Score=70.86 Aligned_cols=55 Identities=24% Similarity=0.319 Sum_probs=44.4
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
.-+++|+++|.+..++ +|+|++||++.|+.. .+.+||.+.... + ...|++|+...
T Consensus 3 ~~~~~al~~y~~~~~~--eLs~~~Gd~i~v~~~---~~~~W~~g~~~~-~---g~~G~fP~~yv 57 (62)
T 2fpe_A 3 EQTHRAIFRFVPRHED--ELELEVDDPLLVELQ---AEDYWYEAYNMR-T---GARGVFPAYYA 57 (62)
T ss_dssp CCCEEECSCBCCSSTT--BCCBCTTCEEEEEEE---CTTSEEEEEETT-T---CCEEEEEGGGE
T ss_pred CCEEEECccCCccCcC--cCcCCCCCEEEEEEe---cCCCEEEEEECC-C---CCEEEechHHE
Confidence 3468999999998877 899999999999874 678899987543 2 35899998753
No 419
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=97.86 E-value=1e-05 Score=69.66 Aligned_cols=52 Identities=15% Similarity=0.304 Sum_probs=43.3
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+.++|+++|.+..++ .|+|++||++.|+.. .+.+||.+.. + ...|++|+...
T Consensus 2 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 53 (58)
T 2bz8_A 2 VEAIVEFDYQAQHDD--ELTISVGEIITNIRK---EDGGWWEGQI---N---GRRGLFPDNFV 53 (58)
T ss_dssp CCEEESSCBCCCSTT--BCCBCTTCEEEEEEC---CTTTEEEEEE---T---TEEEEEEGGGE
T ss_pred EEEEECcccCCCCcC--EeeECCCCEEEEEEe---CCCCEEEEEE---C---CeEEEEehHHe
Confidence 457899999998766 999999999999994 5788999975 2 36899998753
No 420
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.86 E-value=1.1e-05 Score=77.40 Aligned_cols=60 Identities=23% Similarity=0.306 Sum_probs=46.7
Q ss_pred CCCcceeeeccccCCCC----CccccccccCCcEEEEe-cCCCCCCCCcEEEEEeccCCCcccccCcCChhHH
Q psy3835 1329 PGDSFYMRALFSRTGDL----GDALQLRFHKDDILYVD-NTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKV 1396 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~----~~~~~L~f~~gdil~v~-~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~ 1396 (1659)
+....+++|+|+|.+.. +.+.+|+|++||||.|+ + ..+.+||++...+ ...|+||+.+..
T Consensus 14 ~~~~~~~~Alydy~~~~~~~~~~~~eLsf~~Gd~i~v~~~---~~~~gWw~g~~~~-----g~~G~~Psnyv~ 78 (96)
T 1wie_A 14 SGKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGD---MDEDGFYEGELLD-----GQRGLVPSNFVD 78 (96)
T ss_dssp TSCEEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESS---CCSSSCCEEEETT-----CCBCBCCTTSEE
T ss_pred CCCCcEEEECCccCCCcccCCCCCCeeeECCCCEEEEeEe---cCCCCEEEEEECC-----CCEEEEchHHEE
Confidence 34567899999999865 11449999999999999 5 3678899998432 358999998653
No 421
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.85 E-value=1.1e-05 Score=71.95 Aligned_cols=54 Identities=20% Similarity=0.342 Sum_probs=44.5
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
..-|++|+++|.+..++ .|+|++||+++|++. .+.+||.+.. + ...|++|+.+.
T Consensus 6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 59 (68)
T 2dmo_A 6 SGEAHRVLFGFVPETKE--ELQVMPGNIVFVLKK---GNDNWATVMF---N---GQKGLVPCNYL 59 (68)
T ss_dssp CSEEEEECSSCCCCSSS--SCCCCTTCEEEECEE---CSSSCEEEEE---T---TEEEEECSTTE
T ss_pred CCCEEEECcCCCcCCcC--CCCCCCCCEEEEEEe---CCCCEEEEEe---C---CCEEEeehHHe
Confidence 45689999999998877 899999999999984 5678998843 2 35899999763
No 422
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.85 E-value=1.2e-05 Score=73.44 Aligned_cols=56 Identities=29% Similarity=0.491 Sum_probs=46.7
Q ss_pred CCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1329 PGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+....+++|+|+|.+..++ .|+|++||++.|+.. .+.+||++.. + ...|++|+.+.
T Consensus 7 ~~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 62 (76)
T 1ujy_A 7 GSHQLIVKARFNFKQTNED--ELSVCKGDIIYVTRV---EEGGWWEGTL---N---GRTGWFPSNYV 62 (76)
T ss_dssp SCCCEEEECCSCBCCSSTT--SCCBCSSCCEEESSC---CSSSCEEEEE---T---TEEEEECTTTS
T ss_pred CCCCEEEEECccCCcCCCC--cccCCCCCEEEEEEe---cCCCEEEEEE---C---CCEEEechHHE
Confidence 3467889999999998766 999999999999984 5678999975 2 35899999864
No 423
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.85 E-value=1e-05 Score=72.43 Aligned_cols=55 Identities=18% Similarity=0.311 Sum_probs=45.2
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
..++++|+++|.+..++ .|+|++||+++|++. .+.+||++...+ ...|++|+.+.
T Consensus 6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~~-----~~~G~~P~~yv 60 (69)
T 2eqi_A 6 SGRTVKALYDYKAKRSD--ELTFCRGALIHNVSK---EPGGWWKGDYGT-----RIQQYFPSNYV 60 (69)
T ss_dssp CCCEEEESSCBCCCSSS--CCCBCTTCEEESCCC---CSSSCEEEEETT-----EEEEEECGGGE
T ss_pred CCcEEEECeeECCCCcC--ccCCCCCCEEEEEEc---CCCCeEEEEECC-----CCEEEEchHHc
Confidence 56789999999998877 999999999999984 567899997532 23599999864
No 424
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.85 E-value=1.5e-05 Score=71.84 Aligned_cols=58 Identities=24% Similarity=0.483 Sum_probs=46.3
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
....+++|+++|.+..++ .|+|++||++.|+......+.+||.++ . + ...|++|+.+.
T Consensus 5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~~Ww~g~-~--~---g~~G~~P~~yv 62 (71)
T 2cre_A 5 SSGLLARALYDNCPDCSD--ELAFSRGDILTILEQHVPESEGWWKCL-L--H---GRQGLAPANRL 62 (71)
T ss_dssp CCCEEEEESSCCCCSSSS--BCCCCSSCCEEEEESCCTTSTTEEEEE-S--S---SCCEEEETTTE
T ss_pred CCcEEEEECcccCcCCCC--CCCCCCCCEEEEeEcCCCCCCCcEEEE-E--C---CCEEEEehHHE
Confidence 356789999999998766 999999999999985322378999997 2 2 35899998753
No 425
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=97.85 E-value=1.1e-05 Score=71.99 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=45.3
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
....+++|+|+|.+..++ +|+|++||++.|++. +.+||+++.. + ...|+||+.+.
T Consensus 6 ~~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~----~~~Ww~~~~~--~---g~~G~~P~~yv 60 (68)
T 2k2m_A 6 GALKWVLCNYDFQARNSS--ELSVKQRDVLEVLDD----SRKWWKVRDP--A---GQEGYVPYNIL 60 (68)
T ss_dssp CCCCEEEESSCBCCCSSS--BCCBCTTCEEEEEEC----SSSEEEEECT--T---SCCEEEEGGGE
T ss_pred CCCEEEEECccCCCCCCC--cccCCCCCEEEEEEc----CCCeEEEEeC--C---CCEEEEEhhhE
Confidence 356789999999998877 999999999999994 3789998653 2 35899999864
No 426
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=97.84 E-value=9.8e-06 Score=72.10 Aligned_cols=56 Identities=20% Similarity=0.345 Sum_probs=44.5
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..+++.+|+|++|||++|+.. .+.+||++.. + ...|++|+...
T Consensus 5 ~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~---~~~gWw~g~~---~---g~~G~fP~~yv 60 (67)
T 2eyx_A 5 GPIYARVIQKRVPNAYDKTALALEVGELVKVTKI---NVSGQWEGEC---N---GKRGHFPFTHV 60 (67)
T ss_dssp CSCBEEECCCBCCCTTCSSBCCBCSSEEEEEEEE---CTTSEEEEEE---T---TEEEEEEGGGB
T ss_pred CCEEEEEeEEECCCCCCCCccccCCCCEEEEEEe---cCCCEEEEEE---C---CCEEEEehHhE
Confidence 3468999999998843344999999999999984 5778999943 2 35899999753
No 427
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.84 E-value=1.2e-05 Score=73.29 Aligned_cols=58 Identities=19% Similarity=0.257 Sum_probs=46.4
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKV 1396 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~ 1396 (1659)
..-+++|+|+|.+. ++ +|+|++||+|.|++. .+.+||++...+.. ....|+||+.+..
T Consensus 9 ~~~~~~alydy~~~-~~--eLs~~~Gd~i~vl~~---~~~gWw~g~~~~~~--~g~~G~~P~~yv~ 66 (75)
T 2egc_A 9 LKDVYVSIADYEGD-EE--TAGFQEGVSMEVLER---NPNGWWYCQILDGV--KPFKGWVPSNYLE 66 (75)
T ss_dssp CCEEEEECSCBCCC-SS--SCCBCTTCEEEECEE---CTTSEEEEEECCSS--SCEEEEEEGGGEE
T ss_pred CCeEEEECCCcCCC-CC--cCCCCCCCEEEEEEc---CCCCeEEEEeCCCC--CCcEEEEehHHCE
Confidence 44578999999997 66 899999999999984 57789999876542 1358999998643
No 428
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=97.84 E-value=2.3e-05 Score=74.97 Aligned_cols=58 Identities=12% Similarity=0.051 Sum_probs=46.9
Q ss_pred eEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCc
Q psy3835 1262 IYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1262 i~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~ 1319 (1659)
.+|..|.++|||+++||++||+|++|||+.+.++........-...+..+.|+|.|+.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTT
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECC
Confidence 4689999999999999999999999999999987655443322223478999999875
No 429
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=97.82 E-value=1.3e-05 Score=70.78 Aligned_cols=54 Identities=24% Similarity=0.398 Sum_probs=45.0
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
....+++|+|+|.+..++ .|+|++||++.|++. .+.+||.++. + ...|++|+.+
T Consensus 7 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~y 60 (65)
T 3ulr_B 7 DLGITAIALYDYQAAGDD--EISFDPDDIITNIEM---IDDGWWRGVC---K---GRYGLFPANY 60 (65)
T ss_dssp SCCSCEEECSCBCCCSTT--BCCBCTTCEEEEEEC---CSSSEEEEEE---T---TEEEEEEGGG
T ss_pred CCceEEEEEeeECCCCcC--EeeEecCCEEEEEEe---cCCCEEEEEE---C---CcEEEEehHH
Confidence 456789999999998776 899999999999984 4678999873 2 3589999875
No 430
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=97.82 E-value=1.3e-05 Score=72.75 Aligned_cols=55 Identities=22% Similarity=0.349 Sum_probs=45.7
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
....+++|+++|.+..++ .|+|++||+|.|+.. .+.+||.+.. + ...|++|+.+.
T Consensus 5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 59 (73)
T 2dbm_A 5 SSGPCCRALYDFEPENEG--ELGFKEGDIITLTNQ---IDENWYEGML---H---GHSGFFPINYV 59 (73)
T ss_dssp CCCCEEEESSCBCCCSTT--CCCBCTTCEEECCBC---SSSSEEEEEE---T---TEEEEEESSSE
T ss_pred CCCCEEEEccccCCCCCC--CccCCCCCEEEEEEe---cCCCEEEEEE---C---CCEEEechHHE
Confidence 356789999999998776 999999999999984 4678999975 2 35899999864
No 431
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.82 E-value=1.3e-05 Score=71.52 Aligned_cols=54 Identities=15% Similarity=0.337 Sum_probs=44.6
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ +|+|++||+++|+.. .+.+||+++. + ...|++|+.+.
T Consensus 6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 59 (68)
T 2dl4_A 6 SGNTYVALYKFVPQENE--DLEMRPGDIITLLED---SNEDWWKGKI---Q---DRIGFFPANFV 59 (68)
T ss_dssp CCCEEEESSCCCCSSTT--BCCCCTTCEEEEEEC---CCSSEEEEEC---S---SCEEEEETTTE
T ss_pred CCCEEEEeeeECCCCcC--CcCCCCCCEEEEEEe---CCCCEEEEEE---C---CcEEEEehHHe
Confidence 45689999999998766 999999999999994 5778999873 2 35899999753
No 432
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.81 E-value=3e-05 Score=75.74 Aligned_cols=61 Identities=20% Similarity=0.273 Sum_probs=50.4
Q ss_pred cceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1260 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1260 ~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
.|++|..+.|+|+|+++||++||+|++|||+++.++.....+......++.+.|+|.|+..
T Consensus 37 ~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~ 97 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQ 97 (105)
T ss_dssp EEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETTE
T ss_pred EEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECCE
Confidence 3777888888888899999999999999999999998776443333567899999998753
No 433
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=97.81 E-value=1.5e-05 Score=69.28 Aligned_cols=54 Identities=19% Similarity=0.394 Sum_probs=44.0
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
.+++|+++|.+..++ +|+|++||++.|++. ..+.+||++..... ...|++|+..
T Consensus 3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~--~~~~~Ww~g~~~~~----g~~G~~P~~y 56 (60)
T 2v1q_A 3 ERGIVQYDFMAESQD--ELTIKSGDKVYILDD--KKSKDWWMCQLVDS----GKSGLVPAQF 56 (60)
T ss_dssp CEEEECSCBCCCSTT--BCCBCTTCEEEEEES--SSCSSEEEEEETTT----CCEEEEEGGG
T ss_pred cEEEEeeeECCCCCC--CccCCCCCEEEEEeC--CCCCCCEEEEECCC----CCEEEEEHHH
Confidence 478999999998766 999999999999983 14678999976422 3589999875
No 434
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=97.81 E-value=9.1e-06 Score=70.60 Aligned_cols=51 Identities=18% Similarity=0.376 Sum_probs=43.0
Q ss_pred eeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1334 YMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1334 yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
|++|+++|.+..++ +|+|++||++.|++. +.+||+++..+ ...|+||+...
T Consensus 3 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~----~~~Ww~~~~~~-----g~~G~~P~~yv 53 (60)
T 1i07_A 3 YAKSKYDFVARNSS--ELSVMKDDVLEILDD----RRQWWKVRNAS-----GDSGFVPNNIL 53 (60)
T ss_dssp EEEESSCBCCSSTT--BCCBCTTCEEEECGG----GCCEEEEECTT-----SCEEEEEGGGE
T ss_pred EEEECccCCCCCCC--cccCCCCCEEEEEEc----CCCeEEEEECC-----CCEEEEEHHHe
Confidence 78999999998877 999999999999984 67899987543 35899999764
No 435
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=97.81 E-value=1.1e-05 Score=71.86 Aligned_cols=54 Identities=20% Similarity=0.252 Sum_probs=44.6
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHH
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKV 1396 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~ 1396 (1659)
-+++|+++|.+..++ .|+|++||++.|+.. .+.+||+++.. + ...|++|+....
T Consensus 3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~--~---g~~G~~P~~yv~ 56 (67)
T 1gl5_A 3 EIVVAMYDFQATEAH--DLRLERGQEYIILEK---NDLHWWRARDK--Y---GSEGYIPSNYVT 56 (67)
T ss_dssp SCEEECSCBCCSSSS--BCCBCTTCEEEEEEC---SSSSEEEEECS--S---SCEEEEETTSEE
T ss_pred eEEEECccCCCCCCC--eecCCcCCEEEEEEc---cCCCcEEEEEC--C---CCEEEEEhHhEE
Confidence 368999999998877 999999999999995 56889999744 2 358999998643
No 436
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=97.80 E-value=1.4e-05 Score=72.40 Aligned_cols=55 Identities=22% Similarity=0.325 Sum_probs=45.6
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
....+++|+++|.+..++ +|+|++||+++|++. .+.+||.+.. + ...|++|+...
T Consensus 11 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~W~~g~~---~---g~~G~~P~~yv 65 (73)
T 3c0c_A 11 LDQPSCKALYDFEPENDG--ELGFREGDLITLTNQ---IDENWYEGML---H---GQSGFFPLSYV 65 (73)
T ss_dssp CCSCEEEESSCBCCSSTT--BCCBCTTCEEEEEEE---CSSSEEEEEE---T---TEEEEEEGGGE
T ss_pred CCCeEEEECccCCCCCCC--CccCcCCCEEEEEEe---cCCCEEEEEE---C---CCEEEeChHHE
Confidence 356789999999998777 999999999999994 5678999975 2 36899998753
No 437
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=97.80 E-value=1.2e-05 Score=74.36 Aligned_cols=56 Identities=21% Similarity=0.243 Sum_probs=45.8
Q ss_pred CCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCC-cEEEEEeccCCCcccccCcCChhH
Q psy3835 1329 PGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPG-HWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~-~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+....+++|+|+|.+..++ +|+|++||++.|++. .+.+ ||.+.. + ...|+||+.+.
T Consensus 7 ~~~~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~---~~~~gWw~g~~---~---g~~G~fP~~yv 63 (80)
T 2i0n_A 7 PEFAKYARALKDYNVSDTS--LLPFKRNDIITITFK---DQENKWFMGQL---N---GKEGSFPVDHV 63 (80)
T ss_dssp CCCCCEEEESSCBCCCSSS--SCCBCSSEEEEEEEE---SSSSSEEEEEE---T---TEEEEEEGGGE
T ss_pred CCCCeEEEECCCCCcCCCC--CcCCCCCCEEEEEEe---cCCCCEEEEEE---C---CcEEEechHHE
Confidence 4467899999999998777 899999999999995 4455 999863 2 35899999864
No 438
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.80 E-value=2.6e-05 Score=77.16 Aligned_cols=58 Identities=22% Similarity=0.341 Sum_probs=48.7
Q ss_pred CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCc
Q psy3835 1259 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSV 1319 (1659)
Q Consensus 1259 ~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~ 1319 (1659)
..|++|..|.++|||+++||++||+|++|||+++.++.... ..+ ..+..+.|+|.|+.
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--~~l-~~g~~v~l~v~R~g 91 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQ--EAV-LTESPLLLEVRRGN 91 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHH--HHH-HHCSSEEEEEEETT
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHH--HHH-hCCCeEEEEEEECC
Confidence 35899999999999999999999999999999998765443 333 35778999999874
No 439
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=97.80 E-value=1.8e-05 Score=70.69 Aligned_cols=54 Identities=19% Similarity=0.303 Sum_probs=45.2
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ .|+|++||++.|+.. .+.+||.++. + ...|++|+...
T Consensus 6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 59 (68)
T 2djq_A 6 SGPRAKALCNYRGKNPG--DLKFNKGDVILLRRQ---LDENWYQGEI---N---GVSGIFPASSV 59 (68)
T ss_dssp SCCEEEECSCCCSCCTT--CCCCCTTCEEEEEEC---CCSSEEEEEE---T---TEEEEEESSSE
T ss_pred CceEEEECCCCCCCCcC--CccCCCCCEEEEEEe---cCCCEEEEEE---C---CcEEEeehHHE
Confidence 46789999999998766 999999999999984 5688999973 2 35899998754
No 440
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=97.79 E-value=1.6e-05 Score=71.92 Aligned_cols=54 Identities=20% Similarity=0.407 Sum_probs=44.8
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+|+|.+..++ .|+|++||+|.|++. +.+||+++.. + ...|++|+.+.
T Consensus 6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~----~~~Ww~g~~~--~---g~~G~~P~~yv 59 (72)
T 2jw4_A 6 EEVVVVAKFDYVAQQEQ--ELDIKKNERLWLLDD----SKSWWRVRNS--M---NKTGFVPSNYV 59 (72)
T ss_dssp CCEEEECSSCCCCSSTT--SCCCCTTCEEEEEEC----SSSSEEEECT--T---SCEEEECTTSC
T ss_pred CCeEEEECcCCCcCCCC--cccCCCCCEEEEEEC----CCCEEEEEEC--C---CCEEEEEhhHE
Confidence 45689999999998877 999999999999984 4689999754 2 35899999864
No 441
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=97.79 E-value=1.4e-05 Score=69.97 Aligned_cols=53 Identities=13% Similarity=0.175 Sum_probs=43.2
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+.++|+++|.+..++ .|+|++||++.|+.. ..+.+||.+.. + ...|++|+...
T Consensus 2 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~--~~~~~Ww~g~~---~---g~~G~~P~~yv 54 (62)
T 2j6f_A 2 VDYIVEYDYDAVHDD--ELTIRVGEIIRNVKK--LQEEGWLEGEL---N---GRRGMFPDNFV 54 (62)
T ss_dssp CCEEECSCBCCSSTT--BCCBCTTCEEEEEEE--CSSTTEEEEEE---T---TEEEEEEGGGE
T ss_pred EEEEECccCCcCCcC--CcCCcCCCEEEEEEe--cCCCCEEEEEE---C---CcEEEechHHE
Confidence 458999999998766 899999999999984 14678999974 2 36899998753
No 442
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=97.78 E-value=0.0099 Score=87.49 Aligned_cols=19 Identities=11% Similarity=-0.198 Sum_probs=12.0
Q ss_pred CCCCCCEEEeeCCeecCCC
Q psy3835 1168 GLQVGDQLLEVCGINMRSA 1186 (1659)
Q Consensus 1168 GL~~GD~Il~VNg~~v~~~ 1186 (1659)
+.+.|+.|+==|=+-..+|
T Consensus 2693 a~~~G~WV~LqNcHL~~sW 2711 (3245)
T 3vkg_A 2693 AAKSGTWVLLKNIHLAPQW 2711 (3245)
T ss_dssp HHHHTCEEECBCGGGCTTT
T ss_pred HHHcCCEEEEechhhhHhH
Confidence 4667777776665555555
No 443
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=97.78 E-value=1.1e-05 Score=72.54 Aligned_cols=57 Identities=18% Similarity=0.220 Sum_probs=46.4
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
....+++|+++|.+..++ +|+|++||++.|+.. .+.+||++...+. ...|+||+...
T Consensus 5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~~~----g~~G~~P~~yv 61 (70)
T 2ecz_A 5 SSGGEAIAKFNFNGDTQV--EMSFRKGERITLLRQ---VDENWYEGRIPGT----SRQGIFPITYV 61 (70)
T ss_dssp CCCBCEEESSCCCCCSTT--BCCCCTTCBCEEEEE---EETTEEEEEETTT----TEEEEECTTTE
T ss_pred CCCCEEEECccCCCCCcC--CcCCCCCCEEEEEEe---cCCCeEEEEECCC----CCEEEEchHHE
Confidence 356789999999998776 899999999999984 4678999976542 35899999754
No 444
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.78 E-value=1.5e-05 Score=74.66 Aligned_cols=57 Identities=18% Similarity=0.287 Sum_probs=46.7
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKV 1396 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~ 1396 (1659)
....|++|+|+|.+..++ +|+|++||+|.|++. .+.+||+++.. + ...|+||+.+..
T Consensus 17 ~~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~~~~~--~---g~~G~~P~~yv~ 73 (85)
T 2yuq_A 17 PEETVVIALYDYQTNDPQ--ELALRRNEEYCLLDS---SEIHWWRVQDR--N---GHEGYVPSSYLV 73 (85)
T ss_dssp SSSCEEEESSCCCCSCSS--BCCCCBTEEEEEEEC---CSSSEEEEECS--S---SCEEEEETTTCE
T ss_pred CCCeEEEECcCCCCCCCC--cCCCCCCCEEEEEEe---cCCCeEEEEEC--C---CCEEEEehHHeE
Confidence 355789999999998877 999999999999995 56789998642 2 358999998654
No 445
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.78 E-value=3.7e-05 Score=76.15 Aligned_cols=59 Identities=27% Similarity=0.341 Sum_probs=49.0
Q ss_pred CcceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1259 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1259 ~~gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
..|++|..|.++|||+++||++||+|++|||+++.++.. ....+.. +..+.|+|.|+..
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~--~~~~l~~-~~~v~l~v~R~g~ 92 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAED--VYEAVRT-QSQLAVQIRRGRE 92 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHH--HHHHHHH-CSSEEEEEEETTE
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHH--HHHHHhC-CCeEEEEEEECCE
Confidence 368999999999999999999999999999999986543 3344443 6889999998753
No 446
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.77 E-value=3.2e-05 Score=76.48 Aligned_cols=59 Identities=22% Similarity=0.351 Sum_probs=50.2
Q ss_pred CCcEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHhCCCeEEEEEEecCC
Q psy3835 1150 SGGVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQCGNSITMLVQYSPD 1211 (1659)
Q Consensus 1150 ~~gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 1211 (1659)
..|++|..|.++|||+++||++||.|++|||.++.++ .++...+. .+..+.|.|.|++.
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~-~g~~v~l~v~R~g~ 92 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDS--SELQEAVL-TESPLLLEVRRGND 92 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHH-HCSSEEEEEEETTE
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCH--HHHHHHHh-CCCeEEEEEEECCE
Confidence 4689999999999999999999999999999999875 44445553 47889999998775
No 447
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.77 E-value=1.6e-05 Score=71.00 Aligned_cols=54 Identities=22% Similarity=0.360 Sum_probs=44.6
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+|+|.+..++ +|+|++||+|+|++. +.+||+++.. + ...|+||+...
T Consensus 6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~----~~~Ww~~~~~--~---g~~G~~P~~yv 59 (68)
T 1wxb_A 6 SGKYVKILYDFTARNAN--ELSVLKDEVLEVLED----GRQWWKLRSR--S---GQAGYVPCNIL 59 (68)
T ss_dssp SCCCEECSSCBCCSSSS--BCCBCTTCEEEEEEC----SSSEEEEECT--T---SCEEEEETTTC
T ss_pred CCEEEEECccCCCCCCC--ccCCCCCCEEEEEEc----CCCEEEEEEC--C---CCEEEEEHHHe
Confidence 45689999999998776 999999999999984 4789998753 2 35899999864
No 448
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.77 E-value=2.1e-05 Score=71.90 Aligned_cols=57 Identities=25% Similarity=0.351 Sum_probs=44.2
Q ss_pred CcceeeeccccCCCCCc-----cccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGD-----ALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~-----~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+|+|.+..+. +.+|+|++||||+|++.. +..+||++.. + ...|+||+.+.
T Consensus 6 ~~~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~--~~~gWw~g~~---~---g~~G~~P~~yv 67 (76)
T 2csi_A 6 SGRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEI--DEDGFYYGEL---N---GQKGLVPSNFL 67 (76)
T ss_dssp CSEEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESSC--CSSSEEEEEE---T---TEEEEEEGGGC
T ss_pred CccEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEec--CCCCeEEEEE---C---CcEEEEehHHE
Confidence 45789999999998721 449999999999999842 2247999875 2 35899999864
No 449
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=97.77 E-value=1.9e-05 Score=71.73 Aligned_cols=56 Identities=21% Similarity=0.403 Sum_probs=46.6
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
..-|++|+|+|.+..++ +|+|++||++.|+.. +.+||+++....+| ..|++|+.+.
T Consensus 10 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~----~~~W~~g~~~~~~g---~~G~~P~~yv 65 (74)
T 2m0y_A 10 EEKYGVAFYNYDARGAD--ELSLQIGDTVHILET----YEGWYRGYTLRKKS---KKGIFPASYI 65 (74)
T ss_dssp CCSCEEECSEECCCSSS--BCCEETTEEEEEEEB----SSSCEEEEESSCSS---CCEEECGGGE
T ss_pred CCeEEEEceeeCCCCcC--cccCCCCCEEEEEEc----CCCeEEEEECCCCC---CEEEEehHHE
Confidence 45689999999998877 899999999999984 36799998875444 5899999764
No 450
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=97.77 E-value=1.9e-05 Score=69.83 Aligned_cols=55 Identities=22% Similarity=0.232 Sum_probs=43.8
Q ss_pred cceeeeccccCC-CCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1332 SFYMRALFSRTG-DLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1332 ~~yvra~f~y~~-~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...++|+++|.+ ..++ +|+|++||++.|+.. .+.+||.+.... + ...|++|+...
T Consensus 5 ~~~~~alydy~~~~~~~--eLs~~~Gd~i~v~~~---~~~gW~~g~~~~-~---g~~G~~P~~yv 60 (65)
T 2j05_A 5 RRRVRAILPYTKVPDTD--EISFLKGDMFIVHNE---LEDGWMWVTNLR-T---DEQGLIVEDLV 60 (65)
T ss_dssp TCEEEESSCBCCCTTSS--BCCBCTTCEEEEEEE---CTTSEEEEEETT-T---CCEEEEEGGGE
T ss_pred CcEEEEccccCCCCCCC--cCcCCCCCEEEEeEe---cCCCEEEEEECC-C---CCEEEEEhHHe
Confidence 346899999999 7666 999999999999984 567899986432 2 35899999753
No 451
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=97.77 E-value=2.2e-05 Score=70.02 Aligned_cols=54 Identities=22% Similarity=0.290 Sum_probs=44.9
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ .|+|++||++.|+.. .+.+||++.. + ...|++|+...
T Consensus 6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~W~~g~~---~---g~~G~~P~~yv 59 (68)
T 2dl3_A 6 SGRPARAKFDFKAQTLK--ELPLQKGDIVYIYKQ---IDQNWYEGEH---H---GRVGIFPRTYI 59 (68)
T ss_dssp CSEEEEESSCBCCSSTT--BCCBCTTCEEEEEEC---CSTTEEEEEC---S---SCEEEEETTTE
T ss_pred CCcEEEECccCCCCCcC--CccCCCCCEEEEeEe---cCCCEEEEEE---C---CCEEEEchHHE
Confidence 56789999999998776 899999999999984 5678999972 2 35899998753
No 452
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=97.77 E-value=1.5e-05 Score=71.78 Aligned_cols=57 Identities=19% Similarity=0.378 Sum_probs=45.7
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ .|+|++||++.|++.. ..+.+||.++..+ ...|++|+...
T Consensus 5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~~~~Ww~g~~~~-----g~~G~~P~~yv 61 (71)
T 1u5s_A 5 VLHVVQTLYPFSSVTEE--ELNFEKGETMEVIEKP-ENDPEWWKCKNAR-----GQVGLVPKNYV 61 (71)
T ss_dssp SSSEEEESSCCCCCSSS--BCCCCSSCCEEEEECC-CTTTCEEEEEETT-----TEEEEEETTSE
T ss_pred ccEEEEEcccCCCCCCC--cccCCCCCEEEEEECC-CCCCCCEEEEeCC-----CCEEEEeHHHE
Confidence 45689999999998877 9999999999999841 1467899997532 36899999853
No 453
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=97.77 E-value=1.6e-05 Score=73.13 Aligned_cols=56 Identities=29% Similarity=0.458 Sum_probs=45.8
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHH
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKV 1396 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~ 1396 (1659)
..+++|+++|.+..++ +|+|++||++.|++. .+.+||.++.... +..|+||+.+..
T Consensus 5 ~~~~~Alydy~~~~~~--eLs~~~Gd~i~vl~~---~~~~Ww~g~~~~~----g~~G~~P~~yv~ 60 (79)
T 3cqt_A 5 STLFEALYDYEARTED--DLSFHKGEKFQILNS---SEGDWWEARSLTT----GETGYIPSIYLA 60 (79)
T ss_dssp CCCEEESSCBCCCSTT--BCCBCTTCEEEEEEC---TTSSEEEEEETTT----CCEEEEEGGGEE
T ss_pred CcEEEECccCCCCCcC--cCCCCCCCEEEEEEe---cCCCeEEEEECCC----CCEEEeehHHeE
Confidence 3478999999998766 999999999999984 5678999987532 358999998643
No 454
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=97.77 E-value=1.2e-05 Score=71.57 Aligned_cols=52 Identities=19% Similarity=0.351 Sum_probs=42.7
Q ss_pred ceeeeccccCCC--CCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1333 FYMRALFSRTGD--LGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1333 ~yvra~f~y~~~--~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
.|+||+++|.+. .++ .|+|++|||+.|++. .+.+||.+.. + ...|++|+.+.
T Consensus 2 ~~~~al~dy~~~~~~~~--eLsf~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~fP~~yv 55 (67)
T 2bzy_A 2 VFAKAIQKRVPCAYDKT--ALALEVGDIVKVTRM---NINGQWEGEV---N---GRKGLFPFTHV 55 (67)
T ss_dssp EEEEECSCBCSEEECTT--BCCBCTTCEEEEEEE---CSSSEEEEEE---T---TEEEEEEGGGE
T ss_pred cEEEEeeeECCCCCCCC--ccccCCCCEEEEEEe---cCCCeEEEEe---C---CcEEEEehHHe
Confidence 478999999987 555 999999999999984 5778998843 2 35899999864
No 455
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=97.76 E-value=1.7e-05 Score=70.10 Aligned_cols=55 Identities=27% Similarity=0.381 Sum_probs=45.4
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ .|+|++||+++|++. . .+||+++.... ...|+||+...
T Consensus 6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~-~~Ww~g~~~~~----g~~G~~P~~yv 60 (65)
T 1w1f_A 6 QGDIVVALYPYDGIHPD--DLSFKKGEKMKVLEE---H-GEWWKAKSLLT----KKEGFIPSNYV 60 (65)
T ss_dssp CCEEEEESSCBCCCSSS--CCCBCTTCEEEEEEE---C-SSEEEEEETTT----CCEEEEETTTE
T ss_pred CCCEEEEceeECCcCCC--cCCCCCCCEEEEEEc---C-CCEEEEEECCC----CCEEEEEhhHE
Confidence 45689999999998776 899999999999995 3 78999987532 35899999753
No 456
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.76 E-value=1.5e-05 Score=73.41 Aligned_cols=55 Identities=20% Similarity=0.219 Sum_probs=45.1
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
..-+++|+|+|.+..++ +|+|++||+|.|++. +.+||+++.... ...|+||+.+.
T Consensus 16 ~~~~~~Alydy~a~~~~--eLs~~~Gd~i~v~~~----~~~Ww~~~~~~~----g~~G~~P~~yv 70 (79)
T 2cud_A 16 DSDFLAVLSDYPSPDIS--PPIFRRGEKLRVISD----EGGWWKAISLST----GRESYIPGICV 70 (79)
T ss_dssp CCCEEEESSCSSCTTTS--CCSSCTTCEEEEEEE----ETTEEEEEETTT----CCEEEEEGGGE
T ss_pred CCeEEEEccCCCCCCCC--cCCCCCCCEEEEEec----CCCeEEEEECCC----CCEEEeeHHHe
Confidence 45689999999998877 899999999999982 568999976532 25899999864
No 457
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.76 E-value=1.5e-05 Score=74.67 Aligned_cols=56 Identities=25% Similarity=0.255 Sum_probs=45.6
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+..|++|+|+|.+..++ .|+|++|||++|++. ...+.+||++.. . ...|++|+.+.
T Consensus 7 ~~~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~-~~~~~~Ww~g~~---~---g~~G~fP~~yv 62 (85)
T 2dlp_A 7 GSGYVIALRSYITDNCS--LLSFHRGDLIKLLPV-ATLEPGWQFGSA---G---GRSGLFPADIV 62 (85)
T ss_dssp CCCEEEESSCBCCSSSS--BCCBCTTCEEEECCC-SCCCTTEEEEES---S---SCEEEEETTSE
T ss_pred CCEEEEECCCCCccCcC--CccCcCCCEEEEEEc-cCCCCCeEEEEE---C---CEEEEechHHe
Confidence 57899999999998877 999999999999972 125678999864 2 35899999864
No 458
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=97.76 E-value=1.9e-05 Score=71.21 Aligned_cols=58 Identities=24% Similarity=0.290 Sum_probs=45.4
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKV 1396 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~ 1396 (1659)
....+++|+|+|.+..++ +|+|++||++.|++. ..+.+||++... + ...|++|+.+..
T Consensus 9 ~~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~--~~~~~Ww~g~~~--~---g~~G~~P~~yv~ 66 (71)
T 1csk_A 9 PSGTECIAKYNFHGTAEQ--DLPFCKGDVLTIVAV--TKDPNWYKAKNK--V---GREGIIPANYVQ 66 (71)
T ss_dssp --CEEEEESSCBCCSSTT--BCCBCTTCEEEEEEE--CSSTTEEEEECT--T---SCEEEEETTSEE
T ss_pred CCCCEEEEceeECcCCCC--cCCCCCCCEEEEeEC--CCCCCCEEEEeC--C---CCEEEEehHHeE
Confidence 345679999999998877 899999999999982 256789999732 3 358999998653
No 459
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=97.76 E-value=2.1e-05 Score=70.25 Aligned_cols=54 Identities=19% Similarity=0.228 Sum_probs=44.9
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ +|+|++||+++|++. +.+||+++. .+ ...|+||+...
T Consensus 6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~----~~~Ww~~~~--~~---g~~G~~P~~yv 59 (68)
T 1wxt_A 6 SGLKMQVLYEFEARNPR--ELTVVQGEKLEVLDH----SKRWWLVKN--EA---GRSGYIPSNIL 59 (68)
T ss_dssp CCEEEEESSCBCCCSSS--BCCBCTTCEEEEEEC----SSSEEEEEC--TT---SCEEEEEGGGE
T ss_pred CCeEEEECceECCCCcC--cCCCCCCCEEEEEEc----CCCEEEEEE--CC---CCEEEEEhHHc
Confidence 45789999999998877 999999999999995 478999875 22 35899999864
No 460
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.76 E-value=1.7e-05 Score=73.55 Aligned_cols=56 Identities=14% Similarity=0.280 Sum_probs=46.3
Q ss_pred CCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1329 PGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
++...+++|+|+|.+..++ .|+|++||++.|++. .+.+||++... ...|++|+.+.
T Consensus 7 ~~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~------g~~G~~P~~yv 62 (81)
T 2ysq_A 7 GDSIVSAEAVWDHVTMANR--ELAFKAGDVIKVLDA---SNKDWWWGQID------DEEGWFPASFV 62 (81)
T ss_dssp CCCCEEEEESSCCCCSSSS--SCCCCTTCEEEEEEC---CSSSEEEEECS------SCEEEEEGGGE
T ss_pred CCCceEEEEeeeECCCCCC--cCCCCCCCEEEEEEE---cCcCEEEEEEC------CCEEEechHHE
Confidence 3456889999999998776 899999999999984 57889998742 35899998864
No 461
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.76 E-value=1.7e-05 Score=73.06 Aligned_cols=55 Identities=24% Similarity=0.382 Sum_probs=45.9
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...++++|+++|.+..++ .|+|++||+++|++. .+.+||+++. + ...|+||+.+.
T Consensus 15 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 69 (79)
T 1x69_A 15 DLGITAVALYDYQAAGDD--EISFDPDDIITNIEM---IDDGWWRGVC---K---GRYGLFPANYV 69 (79)
T ss_dssp CCCCCEEESSCCCCSSSS--BCCCCTTCEEEEEEE---CSSSEEEEEE---T---TEEEEEETTSE
T ss_pred CCCeEEEECccCCCCCCC--CcCcCCCCEEEEeEe---cCCCeEEEEE---C---CcEEEechHHE
Confidence 467889999999998777 899999999999984 5678999973 2 36899998753
No 462
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.76 E-value=2.3e-05 Score=70.98 Aligned_cols=57 Identities=18% Similarity=0.312 Sum_probs=45.5
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+...+++|+++|.+..++ .|+|++||+|.|+... .++.+||.++. + ...|++|+.+.
T Consensus 5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~~~~Ww~g~~---~---g~~G~~P~~yv 61 (73)
T 2dm1_A 5 SSGGTAVARYNFAARDMR--ELSLREGDVVRIYSRI-GGDQGWWKGET---N---GRIGWFPSTYV 61 (73)
T ss_dssp CSSSEEEESSCBCCCSTT--BCCBCTTCEEECCBSS-SSSSSCEEEEE---T---TEEEEECSSSE
T ss_pred CCCCEEEECccCCcCCCC--cCCCCCCCEEEEEEec-CCCCCeEEEEE---C---CeEEEeehHHE
Confidence 345689999999998766 9999999999999852 12568999974 2 35899999864
No 463
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=97.75 E-value=1.7e-05 Score=70.63 Aligned_cols=56 Identities=18% Similarity=0.198 Sum_probs=45.4
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ +|+|++||++.|+.. .+.+||++...+. ...|++|+...
T Consensus 5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~~~----g~~G~~P~~yv 60 (67)
T 2o9s_A 5 FTGEAIAKFNFNGDTQV--EMSFRKGERITLLRQ---VDENWYEGRIPGT----SRQGIFPITYV 60 (67)
T ss_dssp TSEEEEECSCBCCSSTT--BCCBCTTCEEEEEEE---CSSSEEEEECTTS----SCEEEEEGGGE
T ss_pred CCEEEEECccCCcCCcC--ccCCCCCCEEEEEEe---cCCCEEEEEECCC----CCEEEEChHHe
Confidence 34679999999998766 899999999999984 5678999875441 35899998753
No 464
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=97.75 E-value=2.3e-05 Score=70.56 Aligned_cols=57 Identities=18% Similarity=0.368 Sum_probs=45.9
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ .|+|++||++.|+.. ..+.+||++..... ...|++|+.+.
T Consensus 5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~--~~~~~Ww~g~~~~~----g~~G~~P~~yv 61 (71)
T 2jt4_A 5 SKKRGIVQYDFMAESQD--ELTIKSGDKVYILDD--KKSKDWWMCQLVDS----GKSGLVPAQFI 61 (71)
T ss_dssp CCEEEEECSCBCCSSTT--BCCBCTTCEEEEEES--SSCSSEEEEEETTT----CCEEEEEGGGE
T ss_pred CCCEEEEcccCCCCCCC--cccCCCCCEEEEEEC--CCCCCCEEEEECCC----CCeEEechHHe
Confidence 35689999999998766 999999999999984 12778999976432 35899998864
No 465
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.75 E-value=1.9e-05 Score=74.41 Aligned_cols=54 Identities=19% Similarity=0.341 Sum_probs=44.0
Q ss_pred CcceeeeccccCCC--CCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGD--LGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~--~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...|++|+|+|.+. .++ .|+|++|||++|++. .+.+||++.. + ...|++|+.+.
T Consensus 15 ~~~~~~alydy~~~a~~~~--eLsf~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~fP~~yv 70 (88)
T 2dbk_A 15 GPVFAKAIQKRVPCAYDKT--ALALEVGDIVKVTRM---NINGQWEGEV---N---GRKGLFPFTHV 70 (88)
T ss_dssp CCEEEEECSCBCCCTTCSS--BCCBCTTCEEEEEEE---CTTSCEEEEC---S---SCEEEECTTTE
T ss_pred CCEEEEEcccccCCCCCCC--cccCCCCCEEEEEEe---cCCCEEEEEe---C---CCEEEEehHHe
Confidence 45789999999966 555 899999999999984 6788998842 2 35899999864
No 466
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=97.75 E-value=2.3e-05 Score=71.02 Aligned_cols=56 Identities=21% Similarity=0.396 Sum_probs=45.2
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...|++|+++|.+..++ .|+|++||++.|+... ..+.+||++.. + ...|++|+...
T Consensus 8 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~~~~W~~g~~---~---g~~G~~P~~yv 63 (73)
T 2k9g_A 8 SKDYCKVIFPYEAQNDD--ELTIKEGDIVTLINKD-CIDVGWWEGEL---N---GRRGVFPDNFV 63 (73)
T ss_dssp SCEEEEECSCBCCSSTT--BCCBCTTCEEEEEECC-SSSTTEEEEEE---T---TEEEEEEGGGE
T ss_pred CccEEEECccCCCCCCC--eeeECCCCEEEEEECC-CCCCCEEEEEE---C---CeEEEEchHHE
Confidence 45789999999998877 9999999999999841 02678999974 3 35899998753
No 467
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=97.75 E-value=2.4e-05 Score=68.58 Aligned_cols=55 Identities=24% Similarity=0.202 Sum_probs=44.1
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+..+++|+++|.+..++ .|+|++||++.|+.. ..+.+||.++. .| ..|++|+...
T Consensus 4 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~--~~~~~W~~~~~---~g---~~G~~P~~yv 58 (63)
T 3eg3_A 4 DPNLFVALYDFVASGDN--TLSITKGEKLRVLGY--NHNGEWCEAQT---KN---GQGWVPSAYI 58 (63)
T ss_dssp CTTEEEESSCBCCCSSS--BCCBCTTCEEEEEEE--CTTSSEEEEEE---TT---EEEEEEGGGE
T ss_pred CCEEEEEcceECCCCCC--ccCCCCCCEEEEEEe--CCCCCeEEEEE---CC---CeEEEehHHe
Confidence 45689999999998777 899999999999984 24566888876 23 4799999754
No 468
>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Probab=97.74 E-value=1.9e-05 Score=71.47 Aligned_cols=56 Identities=14% Similarity=0.130 Sum_probs=44.7
Q ss_pred eeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1335 MRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1335 vra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+.++++|.+..+. +|+|++||+|+|++. ..++++||.|+..+... .+.|+||+...
T Consensus 20 ~valydF~Ar~~~--ELS~~kGd~vevle~-~~~~peW~lvr~~~~~~--~qeGlVPsnyl 75 (82)
T 1u3o_A 20 TVVLQDFSAAHSS--ELSIQVGQTVELLER-PSERPGWCLVRTTERSP--PQEGLVPSSTL 75 (82)
T ss_dssp EECSSCBCCCSTT--CCCBCTTCEEEESSC-TTSSTTEEEEEESSSSS--CEEEEEEGGGS
T ss_pred EEEEeeecCCCCC--eeeEcCCCEEEEEec-CCCCCCEEEEEECCCCC--CcEeeccccEE
Confidence 6788999988766 999999999999994 34578999998754322 35799999864
No 469
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=97.74 E-value=1.2e-05 Score=69.59 Aligned_cols=52 Identities=19% Similarity=0.358 Sum_probs=42.8
Q ss_pred eeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1334 YMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1334 yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
+++|+++|.+..++ .|+|++||++.|++. .+.+||++...+. ...|++|+..
T Consensus 3 ~~~al~d~~~~~~~--eLs~~~Gd~i~v~~~---~~~gW~~g~~~~~----g~~G~~P~~y 54 (59)
T 1yn8_A 3 RAVALYDFEPENDN--ELRLAEGDIVFISYK---HGQGWLVAENESG----SKTGLVPEEF 54 (59)
T ss_dssp EEEECSCBCCCSTT--BCCBCTTCEEEEEEE---EETTEEEEECTTS----SCEEEEEGGG
T ss_pred EEEECccCCCCCCC--CcCCCCCCEEEEEEc---CCCCeEEEEECCC----CCEEEEehHH
Confidence 68999999998766 899999999999985 5678999865432 3589999875
No 470
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.74 E-value=1.1e-05 Score=72.64 Aligned_cols=56 Identities=21% Similarity=0.235 Sum_probs=44.6
Q ss_pred CcceeeeccccCC-CCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTG-DLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~-~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
....++|+|+|.+ ..++ +|+|++|||+.|++. .+.+||++.... + ...|+||+.+.
T Consensus 6 ~~~~~~Alydy~~~~~~~--eLsf~~Gd~i~v~~~---~~~~W~~g~~~~-~---g~~G~~P~~yv 62 (71)
T 2gqi_A 6 SGRRVRAILPYTKVPDTD--EISFLKGDMFIVHNE---LEDGWMWVTNLR-T---DEQGLIVEDLV 62 (71)
T ss_dssp SCCCEEESSCCCCCTTSS--CCCCCTTCBCCCCEE---CSSSCEEEECTT-T---CCEEEECTTSE
T ss_pred CCCEEEECcccCCCCCCC--CCCCCCCCEEEEEEe---cCCCEEEEEECC-C---CCEEEeeHHHE
Confidence 3457999999999 7766 899999999999984 567899986322 2 35899999864
No 471
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=97.74 E-value=1.3e-05 Score=72.62 Aligned_cols=54 Identities=19% Similarity=0.318 Sum_probs=44.4
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
.+++|+++|.+..++ +|+|++||++.|++. .+.+||++...+. ...|+||+.+.
T Consensus 6 ~~~~Alydy~a~~~~--eLs~~~Gd~i~v~~~---~~~gWw~g~~~~~----g~~G~~P~~yv 59 (73)
T 2lcs_A 6 QRAVALYDFEPENDN--ELRLAEGDIVFISYK---HGQGWLVAENESG----SKTGLVPEEFV 59 (73)
T ss_dssp EEEEESSCBCCSSTT--BCCBCTTCEEEEEEE---ETTTEEEEECTTS----SCEEEEESTTE
T ss_pred CEEEECccCCCCCCC--ccCCcCCCEEEEEEE---cCCCEEEEEECCC----CCEEEeeHHHE
Confidence 478999999998877 899999999999984 5678999865422 35899999864
No 472
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.74 E-value=1.2e-05 Score=77.16 Aligned_cols=58 Identities=21% Similarity=0.238 Sum_probs=44.5
Q ss_pred CcceeeeccccCCCCC------ccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHH
Q psy3835 1331 DSFYMRALFSRTGDLG------DALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKV 1396 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~------~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~ 1396 (1659)
...+++|+|+|.+..+ .+.+|+|++||||+|++. .++.+||+++. + ...|+||+.+..
T Consensus 16 ~~~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~--~~~~gWw~g~~---~---g~~G~~P~~yv~ 79 (97)
T 2csq_A 16 PARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGD--KDADGFYRGET---C---ARLGLIPCNMVS 79 (97)
T ss_dssp CCEEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEEE--ECTTCEEEEEE---T---TEEEEEETTTSE
T ss_pred CceEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEEe--cCCCCeEEEEE---C---CcEEEEehHHeE
Confidence 4568999999998721 134999999999999963 24567999976 2 368999998653
No 473
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.73 E-value=2.7e-05 Score=69.87 Aligned_cols=56 Identities=20% Similarity=0.254 Sum_probs=46.0
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ +|+|++||+++|+.. .+.+||++..... ...|++|+...
T Consensus 6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~gW~~g~~~~~----g~~G~~P~~yv 61 (70)
T 2ct3_A 6 SGTPYRAMYQYRPQNED--ELELREGDRVDVMQQ---CDDGWFVGVSRRT----QKFGTFPGNYV 61 (70)
T ss_dssp CCEEEEESSCBCCSSTT--BCCBCTTEEEEEEEE---CSSSCEEEEESSS----CCEEEECTTTE
T ss_pred CCcEEEECccCCcCCcC--CccCCCCCEEEEEEE---CCCCEEEEEECCC----CCEEEechHHe
Confidence 45689999999998777 899999999999984 4678999976422 35899999864
No 474
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=97.73 E-value=2e-05 Score=68.61 Aligned_cols=52 Identities=29% Similarity=0.414 Sum_probs=42.6
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccc-cCcCChh
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQC-GIIPSKY 1394 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~-GlIPs~~ 1394 (1659)
..+++|+++|.+..++ +|+|++||++.|+.. .+.+||.+.. .+ .. |++|+..
T Consensus 3 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~W~~g~~---~g---~~gG~~P~~y 55 (61)
T 1y0m_A 3 KSAVKALFDYKAQRED--ELTFTKSAIIQNVEK---QDGGWWRGDY---GG---KKQLWFPSNY 55 (61)
T ss_dssp CCCEEESSCBCCCSTT--BCCBCTTCEEEEEEC---CSSSEEEEEE---TT---EEEEEEEGGG
T ss_pred CCEEEECcCCCcCCCC--CcCCcCCCEEEEEEe---cCCCEEEEEE---CC---eEEEEEChHH
Confidence 3579999999998877 999999999999994 5678999975 22 24 5999875
No 475
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=97.72 E-value=0.0068 Score=89.14 Aligned_cols=40 Identities=3% Similarity=0.129 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q psy3835 553 KKTLSYQIETLKREIASALHDRDKALKECNDLRERFGEFT 592 (1659)
Q Consensus 553 ~~~l~~ele~Lk~ei~~l~~~~~~aieE~e~l~er~~e~~ 592 (1659)
.+..+.++....+=+..|+.++..=.+..+.++.++..+.
T Consensus 2065 ~~~~~~kl~rA~~Li~gL~~Ek~RW~~~~~~l~~~~~~L~ 2104 (3245)
T 3vkg_A 2065 SSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMSTVV 2104 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHhcc
Confidence 3333444444444444444444444444444444444443
No 476
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=97.72 E-value=2e-05 Score=70.52 Aligned_cols=57 Identities=25% Similarity=0.327 Sum_probs=46.0
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHHHH
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKVEE 1398 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~e~ 1398 (1659)
.-+++|+++|.+..++ .|+|++||++.|++. .+.+||+++.. + +..|++|+....+.
T Consensus 6 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~--~---g~~G~~P~~yv~~~ 62 (69)
T 4esr_A 6 APTVVALYDYTANRSD--ELTIHRGDIIRVFFK---DNEDWWYGSIG--K---GQEGYFPANHVASE 62 (69)
T ss_dssp CCEEEESSCBCCCSTT--BCCBCTTCEEEEEEE---CSSSEEEEEEE--T---TEEEEEEGGGEEEH
T ss_pred cCEEEECccCCCCCcC--cCCCCCCCEEEEEEe---cCCCeEEEEeC--C---CCEEEEchHHeEEC
Confidence 3479999999998766 899999999999984 56789999652 2 35899999876543
No 477
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=97.72 E-value=1.9e-05 Score=73.27 Aligned_cols=55 Identities=22% Similarity=0.377 Sum_probs=44.6
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
....+++|+++|.+..++ +|+|++||++.|++. .+.+||.+. . + ...|++|+.+.
T Consensus 15 ~~~~~~~Alydy~a~~~~--eLsf~~Gd~i~Vl~~---~~~gWw~g~-~--~---g~~G~~P~~yv 69 (83)
T 1neg_A 15 TGKELVLALYDYQEKSPR--EVTMKKGDILTLLNS---TNKDWWKVE-V--N---DRQGFVPAAYV 69 (83)
T ss_dssp --CCEEEESSCBCCSSTT--BCCBCTTCEEEEEEC---CSSSEEEEE-E--T---TEEEEEEGGGE
T ss_pred CCceEEEEccccCCCCCC--ccccCCCCEEEEEEe---cCCCEEEEE-E--C---CeEEEEEHHHE
Confidence 466789999999998777 999999999999994 567899983 2 2 35899999864
No 478
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=97.72 E-value=1.7e-05 Score=71.40 Aligned_cols=54 Identities=24% Similarity=0.324 Sum_probs=44.3
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
-+++|+|+|.+..++ +|+|++||++.|+.. .+.+||.+.... + ...|++|+...
T Consensus 7 ~~~~al~~y~~~~~~--eLs~~~Gd~i~v~~~---~~~gW~~g~~~~-~---g~~G~fP~~yv 60 (71)
T 2fpf_A 7 QTHRAIFRFVPRHED--ELELEVDDPLLVELQ---AEDYWYEAYNMR-T---GARGVFPAYYA 60 (71)
T ss_dssp CCEEECSCBCCSSTT--BCCBCTTCEEEEEEE---CTTSEEEEEETT-T---TEEEEEEGGGE
T ss_pred eEEEECeeECccCCC--cccCcCCcEEEEeEe---cCCCEEEEEECC-C---CCEEEeehHHE
Confidence 468999999998877 899999999999874 678899987532 2 36899999864
No 479
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=97.72 E-value=2.1e-05 Score=71.04 Aligned_cols=55 Identities=24% Similarity=0.283 Sum_probs=44.3
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
....+++|+|+|.+..++ .|+|++||++.|++. .+.+||+++. + ...|++|+.+.
T Consensus 11 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~W~~g~~---~---g~~G~~P~~yv 65 (72)
T 4glm_A 11 GALTYGVALYRFQALEPN--ELDFEVGDKIRILAT---LEDGWLEGSL---K---GRTGIFPYRFV 65 (72)
T ss_dssp --CCEEEESSCBCCCSTT--BCCBCTTCEEEEEEE---CSTTEEEEEE---T---TEEEEEEGGGE
T ss_pred CCCeEEEECccCCCCCCC--cCCCCCCCEEEEEEc---cCCCEEEEEE---C---CcEEEEChHHe
Confidence 346789999999998766 899999999999984 5678999983 2 35899998753
No 480
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.72 E-value=2.1e-05 Score=72.74 Aligned_cols=58 Identities=26% Similarity=0.365 Sum_probs=46.6
Q ss_pred CCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1329 PGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1329 ~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+....+++|+++|.+..++ +|+|++||+|.|++... .+.+||+++. + ...|++|+.+.
T Consensus 14 ~~~~~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~~~-~~~~Ww~g~~---~---g~~G~~P~~yv 71 (80)
T 2d8h_A 14 LNQPIEVTALYSFEGQQPG--DLNFQAGDRITVISKTD-SHFDWWEGKL---R---GQTGIFPANYV 71 (80)
T ss_dssp CSSCEEEECSSCEECSSTT--BCEECTTCEEEEEECCS-CSSSEEEEEE---T---TEEEEEEGGGC
T ss_pred CCCCEEEEECccCCcCCCC--eeeEcCCCEEEEeECcC-CCCCeEEEEE---C---CEEEEEchhHe
Confidence 3466789999999998877 89999999999998521 1378999987 2 35899999864
No 481
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=97.71 E-value=2.7e-05 Score=69.26 Aligned_cols=57 Identities=18% Similarity=0.250 Sum_probs=43.8
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
...+++|+|+|.+..++ ..|+|++|||+.|+.. ..+.+||++.+.. + ...|++|+..
T Consensus 6 ~~~~~~al~dy~~~~~~-e~Lsf~~Gd~i~v~~~--~~~~gW~~g~~~~-~---g~~G~fP~~y 62 (67)
T 3rnj_A 6 GRMRVKAIFSHAAGDNS-TLLSFKEGDLITLLVP--EARDGWHYGESEK-T---KMRGWFPFSY 62 (67)
T ss_dssp CCCEEEESSCBCCCSCT-TBCCBCTTCEEEECSS--SCBTTEEEEEETT-T---CCEEEEEGGG
T ss_pred CCeEEEEccccCCCCCC-CCccCCCCCEEEEeec--cCCCCCEEEEECC-C---CCEEEEEHHH
Confidence 45689999999987655 1399999999999863 2466899997542 2 3589999875
No 482
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=97.71 E-value=2.2e-05 Score=70.27 Aligned_cols=53 Identities=23% Similarity=0.396 Sum_probs=43.2
Q ss_pred eeeeccccC-CCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1334 YMRALFSRT-GDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1334 yvra~f~y~-~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
.++|+++|. +..++ +|+|++||++.|+.. .+.+||++...+. ...|+||+.+.
T Consensus 4 ~~~alydy~~~~~~~--eLs~~~Gd~i~v~~~---~~~~W~~g~~~~~----g~~G~~P~~yv 57 (69)
T 1ruw_A 4 KFEAAYDFPGSGSSS--ELPLKKGDIVFISRD---EPSGWSLAKLLDG----SKEGWVPTAYM 57 (69)
T ss_dssp EEEESSCBCCCSCTT--BCCBCTTCEEEEEEE---CTTSEEEEEETTS----SCEEEEEGGGE
T ss_pred EEEEccccCCCCCCC--cccCCCCCEEEEEEe---cCCCeEEEEECCC----CCEEEEehHHe
Confidence 579999996 77766 899999999999984 4678999976532 35899999864
No 483
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=97.71 E-value=2.8e-05 Score=65.89 Aligned_cols=51 Identities=24% Similarity=0.336 Sum_probs=41.4
Q ss_pred eeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1334 YMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1334 yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
.++|+++|.+..++ .|+|++||++.|+... +..+||.+.. +| ..|++|+..
T Consensus 2 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~--~~~~W~~g~~---~g---~~G~~P~~y 52 (54)
T 2a28_A 2 AMEAIYAYEAQGDD--EISIDPGDIITVIRGD--DGSGWTYGEC---DG---LKGLFPTSY 52 (54)
T ss_dssp EEEBCSCBCCCSTT--BCCBCTTCEEEEEECC--CSSSEEEEEE---TT---EEEEEEGGG
T ss_pred EEEECccCCcCCCC--CccCCCCCEEEEEEec--CCCCEEEEEE---CC---eEEEeeHHH
Confidence 37899999998766 9999999999999851 2368999987 33 589999864
No 484
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=97.71 E-value=1.2e-05 Score=73.92 Aligned_cols=57 Identities=19% Similarity=0.250 Sum_probs=47.1
Q ss_pred CCCCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1328 KPGDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1328 ~~~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
.+....+++|+|+|.+..++ +|+|++||++.|++. .+.+||.+.. + +..|++|+.+.
T Consensus 14 ~~~~~~~~~Alydy~a~~~~--eLsf~~Gd~I~Vl~~---~~~gWw~g~~---~---g~~G~fP~nyV 70 (79)
T 1z9q_A 14 DRMAAPRAEALFDFTGNSKL--ELNFKAGDVIFLLSR---INKDWLEGTV---R---GATGIFPLSFV 70 (79)
T ss_dssp CCSSCCCEEESSCCCCSSTT--BCCCCTTCCBCCCEE---SSSSEEEEEE---T---TEEEEEEGGGE
T ss_pred CCCCceEEEEcCccCCCCCC--cccccCCCEEEEeEe---cCCCEEEEEE---C---CeEEEecHHHE
Confidence 34567789999999998877 899999999999984 5788999974 2 35899998764
No 485
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=97.71 E-value=8.4e-06 Score=74.78 Aligned_cols=56 Identities=20% Similarity=0.296 Sum_probs=45.6
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
.+..+++|+|+|.+..++ +|+|++||++.|++. .+.+||+++. .+ +..|+||+.+.
T Consensus 18 ~~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~~~~--~~---g~~G~~P~~yv 73 (77)
T 1awj_A 18 PEETLVIALYDYQTNDPQ--ELALRCDEEYYLLDS---SEIHWWRVQD--KN---GHEGYAPSSYL 73 (77)
T ss_dssp CSSSCCCCCCCBCCCCTT--SCCBCSSSCCSCCCT---TSSSBCCCCC--SS---SCCCCCBSTTC
T ss_pred CCceEEEECccCCCCCcC--CcCCCCCCEEEEEEe---cCCCCEEEEE--CC---CCEEEEehHHE
Confidence 345789999999998877 999999999999984 5678998754 22 36899999864
No 486
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=97.70 E-value=1.9e-05 Score=67.99 Aligned_cols=53 Identities=13% Similarity=0.250 Sum_probs=42.3
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCC-CCcEEEEEeccCCCcccccCcCChh
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGV-PGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~-~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
+.++|+++|.+..++ +|+|++||++.|+.. .+ .+||++.... + ...|++|+..
T Consensus 2 ~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~---~~~~~W~~g~~~~-~---g~~G~~P~~y 55 (58)
T 1zuu_A 2 MENKVLYAYVQKDDD--EITITPGDKISLVAR---DTGSGWTKINNDT-T---GETGLVPTTY 55 (58)
T ss_dssp -CCEECSCBCCCSTT--BCCBCTTCCEEEEEC---CSSSSEEEEEETT-T---TEEEEEEGGG
T ss_pred CEEEEeeeECCcCCC--cccCCCCCEEEEeEc---CCCCCCEEEEECC-C---CCEEEEEHHH
Confidence 457999999998776 999999999999985 33 6899997642 2 3589999875
No 487
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=97.70 E-value=3e-05 Score=70.23 Aligned_cols=53 Identities=23% Similarity=0.266 Sum_probs=42.9
Q ss_pred cceeeeccccCCC--CCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1332 SFYMRALFSRTGD--LGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1332 ~~yvra~f~y~~~--~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
..++||+++|.+. .++ +|+|++|||+.|++. .+.+||++.. + ...|++|+.+.
T Consensus 9 ~~~~~alydy~~~~~~~~--eLs~~~Gd~i~v~~~---~~~gWw~g~~---~---g~~G~fP~~yv 63 (73)
T 2ebp_A 9 CGRARVHTDFTPSPYDTD--SLKLKKGDIIDIISK---PPMGTWMGLL---N---NKVGTFKFIYV 63 (73)
T ss_dssp SEEEEECSCBCCCTTCCS--BCCBCSSCEEEEEEC---CSSSCEEEEC---S---SCEEEECSTTE
T ss_pred ceEEEEeeccCCCCCCCC--ccCCCCCCEEEEEEe---CCCCeEEEEE---C---CCEEEEeHHHE
Confidence 4579999999986 545 999999999999995 6788999853 2 35899999753
No 488
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=97.70 E-value=2.9e-05 Score=69.45 Aligned_cols=54 Identities=31% Similarity=0.416 Sum_probs=45.1
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
..-+++|+++|.+..++ .|+|++||+++|+.. .+.+||+++.- ...|++|+.+.
T Consensus 7 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~------g~~G~~P~~yv 60 (69)
T 2dil_A 7 GAQEYRALYDYTAQNPD--ELDLSAGDILEVILE---GEDGWWTVERN------GQRGFVPGSYL 60 (69)
T ss_dssp CCCEEECCSCBCCSSSS--SCCBCTTCEEEEEEC---CSSSEEEEEET------TEEEEEEGGGC
T ss_pred CCcEEEECccCCccCcC--ccCCCCCCEEEEEEC---CCCCEEEEEEC------CCEEEEehHHe
Confidence 34579999999998877 999999999999995 56789999762 36899998864
No 489
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=97.70 E-value=2.6e-05 Score=69.53 Aligned_cols=57 Identities=18% Similarity=0.377 Sum_probs=42.0
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCC--CCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMF--NGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~--~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
-|+.+|+++|.|..++ .+|+|++||++.|++... .++.+||+++..+ ...|+||+.+
T Consensus 7 ~~~~~aly~y~a~~~~-dELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~~-----G~~G~~Psny 65 (69)
T 1nm7_A 7 HHFARALYDFVPENPE-MEVALKKGDLMAILSKKDPLGRDSDWWKVRTKN-----GNIGYIPYNY 65 (69)
T ss_dssp --CEEECSCCCCSSTT-SCCCCCTTCEEEECCSSSSSCCSSSCEEEEETT-----TEEEEECGGG
T ss_pred eeEEEEEecccCCCCC-CccCCCCCCEEEEEecCCCCCCCCCeeEEEeCC-----CCEEEecHHH
Confidence 4789999999987532 289999999999998521 0135899997632 3589999975
No 490
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=97.69 E-value=1.6e-05 Score=70.78 Aligned_cols=55 Identities=25% Similarity=0.328 Sum_probs=44.9
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ .|+|++||++.|+.. .+.+||+++.. + ...|++|+.+.
T Consensus 7 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~~--~---g~~G~~P~~yv 61 (67)
T 1aww_A 7 ELKKVVALYDYMPMNAN--DLQLRKGDEYFILEE---SNLPWWRARDK--N---GQEGYIPSNYV 61 (67)
T ss_dssp CCCEEEBSSCCCCSSSS--SCCCCSSCEEECCCC---CSSSEECCBCT--T---SCBCCEETTTB
T ss_pred CCeEEEECccCCCCCCC--CccCCCCCEEEEEEc---cCCCcEEEEEC--C---CCEEEEchHhE
Confidence 45689999999998766 999999999999984 56789988643 2 35899999864
No 491
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.69 E-value=2.8e-05 Score=73.71 Aligned_cols=58 Identities=24% Similarity=0.344 Sum_probs=47.8
Q ss_pred cEEEEEeCCCChhhhcCCCCCCEEEeeCCeecCCCCHHHHHHHHHh-CCCeEEEEEEecCC
Q psy3835 1152 GVFVSTVSEHSLASQVGLQVGDQLLEVCGINMRSATYQLAASVLRQ-CGNSITMLVQYSPD 1211 (1659)
Q Consensus 1152 gv~I~~V~~gs~A~~~GL~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~l~v~r~~~ 1211 (1659)
.++|..|.++|||+++||++||.|++|||.++.++. ++...+.. .+..+.|.|.|++.
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~--~~~~~l~~~~g~~v~l~v~R~g~ 63 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWV--TFVMLVRDNPGXSLALEIERQGS 63 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHH--HHHHHHHHCTTCCEEEEEEETTE
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHH--HHHHHHhcCCCCeEEEEEEECCe
Confidence 357889999999999999999999999999998764 44445543 47789999999775
No 492
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.69 E-value=3.5e-05 Score=73.08 Aligned_cols=59 Identities=22% Similarity=0.279 Sum_probs=47.4
Q ss_pred ceEEEEeCCCChhhhcCCCCCCEEEEECCeeCCCcCHHHHHHHHcCCCCeEEEEEEeCcc
Q psy3835 1261 GIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAQYSVE 1320 (1659)
Q Consensus 1261 gi~V~~V~~gs~A~~~gL~~GD~Il~VNg~~v~~~t~~~~~~~l~~~~~~v~L~v~r~~~ 1320 (1659)
.++|..|.++|||+++||++||+|++|||.++.++........ ...+..+.|+|.|+..
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~-~~~g~~v~l~v~R~g~ 63 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVR-DNPGXSLALEIERQGS 63 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHH-HCTTCCEEEEEEETTE
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHh-cCCCCeEEEEEEECCe
Confidence 4678899999999999999999999999999998755443322 2467899999998753
No 493
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.69 E-value=4e-05 Score=70.63 Aligned_cols=55 Identities=25% Similarity=0.449 Sum_probs=45.4
Q ss_pred CCcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1330 GDSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1330 ~~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
+...+++|+++|.+..++ .|+|++||+|.|+.. .+.+||.+.. + ...|+||+.+.
T Consensus 5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~---g~~G~~P~~yv 59 (79)
T 2yun_A 5 SSGRLCKALYSFQARQDD--ELNLEKGDIVIIHEK---KEEGWWFGSL---N---GKKGHFPAAYV 59 (79)
T ss_dssp CCSEEEEESSCBCCSSTT--BCCBCTTCEEEEEEC---CSSSCEEEES---S---SCEEEECSTTE
T ss_pred CCCCEEEECccCCcCCCC--CcCCCCCCEEEEEEc---CCCCEEEEEE---C---CCEEEEEhHHe
Confidence 345789999999998766 999999999999984 5678999972 2 35899999864
No 494
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=97.69 E-value=3.3e-05 Score=68.64 Aligned_cols=57 Identities=18% Similarity=0.221 Sum_probs=44.4
Q ss_pred CcceeeeccccCC-CCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTG-DLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~-~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+ ..++ .|+|++||++.|++. ..+.+||++.... + ...|++|+.+.
T Consensus 5 ~~~~~~al~dy~a~~~~~--eLs~~~Gd~i~v~~~--~~~~~Ww~g~~~~-~---g~~G~~P~~yv 62 (67)
T 2kxc_A 5 KKQKVKTIFPHTAGSNKT--LLSFAQGDVITLLIP--EEKDGWLYGEHDV-S---KARGWFPSSYT 62 (67)
T ss_dssp CCCEEEESSCBCCSSCSS--BCCBCTTCEEEESSS--SCBTTEEEEEESS-S---CCEEEEEGGGE
T ss_pred CCEEEEEeecCCCCCCCC--CCcCCCCCEEEEeEC--CCCCCcEEEEECC-C---CCEEEEehHHe
Confidence 4568999999995 6655 899999999999972 1567899987642 2 35899999753
No 495
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=97.69 E-value=2.5e-05 Score=70.60 Aligned_cols=55 Identities=20% Similarity=0.355 Sum_probs=44.5
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+|+|.+..++ .|+|++||+++|++. ..+.+||++.. + ...|++|+.+.
T Consensus 9 ~~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~--~~~~~Ww~g~~---~---g~~G~~P~~yv 63 (72)
T 1ugv_A 9 PFRKAKALYACKAEHDS--ELSFTAGTVFDNVHP--SQEPGWLEGTL---N---GKTGLIPENYV 63 (72)
T ss_dssp SCCCEEESSCBCCCSSS--BCCBCTTCEEBSCCB--CSSTTEEEEES---S---SCEEEEEGGGE
T ss_pred CccEEEEccccCCcCCC--EeCCcCCCEEEEEEe--cCCCCeEEEEE---C---CcEEEecHHHE
Confidence 45689999999998877 899999999999872 25678999862 2 35899998764
No 496
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=97.68 E-value=2.7e-05 Score=71.89 Aligned_cols=52 Identities=21% Similarity=0.389 Sum_probs=43.6
Q ss_pred ceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1333 FYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1333 ~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
-+++|+++|.+..++ +|+|++||+|.|++. .+.+||++.. +| ..|++|+.+.
T Consensus 3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~g---~~G~~P~~yv 54 (80)
T 2pqh_A 3 ELVLALYDYQEKSPR--EVTMKKGDILTLLNS---TNKDWWKVEV---ND---RQGFVPAAYV 54 (80)
T ss_dssp EEEEECSCBCCCSTT--BCCBCTTCEEEEEEC---CSSSEEEEEE---TT---EEEEEEGGGE
T ss_pred eEEEECccCCCCCCC--ccCCCCCCEEEEEEe---cCCCEEEEEE---CC---cEEEEehHHe
Confidence 368999999998766 999999999999994 5678999876 23 5899999864
No 497
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=97.68 E-value=2.5e-05 Score=72.82 Aligned_cols=56 Identities=25% Similarity=0.392 Sum_probs=45.8
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhHH
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYKV 1396 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~~ 1396 (1659)
..+++|+|+|.+..++ .|+|++||++.|++. .+.+||+++... + ...|++|+.+..
T Consensus 6 ~~~~~Alydy~a~~~~--eLsf~~Gd~i~vl~~---~~~~Ww~g~~~~-~---g~~G~~P~~yv~ 61 (84)
T 4ag1_C 6 VTLFVALYDYNATRWT--DLSFHKGEKFQILEF---GPGDWWEARSLT-T---GETGYIPSNYVA 61 (84)
T ss_dssp CCEEEESSCBCCSBTT--BCCBCTTCEEEEEEC---CSSSEEEEEETT-T---CCEEEEEGGGEE
T ss_pred CEEEEEcccCCCCCCC--cccccCCCEEEEEEe---cCCCeEEEEECC-C---CCEEEEehHHeE
Confidence 4579999999998766 899999999999984 567899998752 2 358999998643
No 498
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.68 E-value=3e-05 Score=69.66 Aligned_cols=56 Identities=21% Similarity=0.398 Sum_probs=44.8
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
...+++|+++|.+..++ .|+|++||+++|++.. ..+.+||++.. + ...|++|+...
T Consensus 6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~~~~W~~g~~---~---g~~G~~P~~yv 61 (70)
T 2da9_A 6 SGDYCKVIFPYEAQNDD--ELTIKEGDIVTLINKD-CIDVGWWEGEL---N---GRRGVFPDNFV 61 (70)
T ss_dssp SSEEEEECSCCCCSSTT--BCCCCTTEEEEEEECC-CSSTTEEEEEC---S---SCEEEEEGGGE
T ss_pred CCcEEEECcCCCCCCcC--EeeEcCCCEEEEEECC-CCCCCeEEEEE---C---CcEEEechHHe
Confidence 45689999999998766 9999999999999841 12678999973 3 35899998763
No 499
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=97.68 E-value=2.4e-05 Score=68.88 Aligned_cols=54 Identities=17% Similarity=0.268 Sum_probs=43.2
Q ss_pred cceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChh
Q psy3835 1332 SFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKY 1394 (1659)
Q Consensus 1332 ~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~ 1394 (1659)
..+++|+++|.+..++ .|+|++||++.|+.. .+.+||++.... + ...|++|+..
T Consensus 6 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~W~~g~~~~-~---g~~G~~P~~y 59 (64)
T 4f14_A 6 LRTYRAMYDYSAQDED--EVSFRDGDYIVNVQP---IDDGWMYGTVQR-T---GRTGMLPANY 59 (64)
T ss_dssp --CEEESSCBCCCSTT--BCCBCTTCEEEEEEE---CSSSEEEEEETT-T---TEEEEEEGGG
T ss_pred CEEEEECeeeCCcCCC--cCCCCCCCEEEEEEe---CCCCeEEEEECC-C---CCEEEEeHHH
Confidence 4578999999998776 899999999999984 467899987652 2 3589999875
No 500
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.68 E-value=1.7e-05 Score=72.46 Aligned_cols=54 Identities=30% Similarity=0.534 Sum_probs=45.2
Q ss_pred CcceeeeccccCCCCCccccccccCCcEEEEecCCCCCCCCcEEEEEeccCCCcccccCcCChhH
Q psy3835 1331 DSFYMRALFSRTGDLGDALQLRFHKDDILYVDNTMFNGVPGHWRAWLVDADGFRQQCGIIPSKYK 1395 (1659)
Q Consensus 1331 ~~~yvra~f~y~~~~~~~~~L~f~~gdil~v~~t~~~~~~~~W~a~~v~~~~~~~~~GlIPs~~~ 1395 (1659)
..++++|+++|.+..++ .|+|++||+|+|++. .+.+||.+.. +| ..|+||+.+.
T Consensus 9 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~---~~~~Ww~g~~---~g---~~G~~P~~yv 62 (76)
T 2epd_A 9 GVVEAVACFAYTGRTAQ--ELSFRRGDVLRLHER---ASSDWWRGEH---NG---MRGLIPHKYI 62 (76)
T ss_dssp CCEEEEESSCEECSSTT--BCEECTTCEEEEEEE---EETTEEEEEE---TT---EEEEEESSSE
T ss_pred CCEEEEECcCCCCCCCC--ccCCCCCCEEEEEEe---CCCCEEEEEE---CC---cEEEEehHHE
Confidence 45789999999998766 899999999999985 4678999976 23 5899999864
Done!