Query psy3838
Match_columns 74
No_of_seqs 33 out of 35
Neff 2.7
Searched_HMMs 13730
Date Fri Aug 16 18:43:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3838.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/3838hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xy7a_ d.32.1.9 (A:) Hypothet 71.5 0.61 4.5E-05 26.6 0.9 15 9-23 17-31 (135)
2 d1sqia1 d.32.1.3 (A:8-156) 4-h 38.8 3.4 0.00025 23.6 0.2 13 11-23 23-35 (149)
3 d1t47a1 d.32.1.3 (A:16-178) 4- 23.2 9.9 0.00072 22.0 0.4 14 10-23 18-31 (163)
4 d1u6la_ d.32.1.7 (A:) Hypothet 21.1 13 0.00097 20.9 0.7 14 9-22 13-26 (137)
5 d1i7na1 c.30.1.5 (A:113-214) S 21.1 25 0.0018 21.7 2.0 29 42-73 58-86 (102)
6 d2ddha2 a.29.3.2 (A:475-655) P 20.4 16 0.0012 22.8 1.0 22 20-41 146-167 (181)
7 d2pjsa1 d.32.1.2 (A:3-113) Unc 20.3 15 0.0011 19.0 0.7 15 9-23 12-26 (111)
8 d1f9za_ d.32.1.1 (A:) Glyoxala 20.3 16 0.0011 19.1 0.8 13 11-23 14-26 (135)
9 d1sqda1 d.32.1.3 (A:14-180) 4- 19.2 17 0.0012 20.9 0.9 13 11-23 24-36 (167)
10 d2c21a1 d.32.1.1 (A:3-141) Gly 16.8 18 0.0013 18.7 0.6 15 10-24 14-28 (139)
No 1
>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=71.46 E-value=0.61 Score=26.55 Aligned_cols=15 Identities=27% Similarity=0.237 Sum_probs=12.7
Q ss_pred ccchhhhhhHHhhhc
Q psy3838 9 CSVTSVIGYQKKIGA 23 (74)
Q Consensus 9 ~~~~~i~wyqkKig~ 23 (74)
..++||.||++-+|.
T Consensus 17 ~~~eAi~FY~~~fG~ 31 (135)
T d1xy7a_ 17 KVGDAVTFYKSAFGA 31 (135)
T ss_dssp CHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHhCC
Confidence 457799999999985
No 2
>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.84 E-value=3.4 Score=23.65 Aligned_cols=13 Identities=23% Similarity=0.225 Sum_probs=11.7
Q ss_pred chhhhhhHHhhhc
Q psy3838 11 VTSVIGYQKKIGA 23 (74)
Q Consensus 11 ~~~i~wyqkKig~ 23 (74)
+.|+.||++.+|.
T Consensus 23 ~~a~~fY~~~lGf 35 (149)
T d1sqia1 23 KQAASFYCNKMGF 35 (149)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHhhccce
Confidence 7799999999987
No 3
>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}
Probab=23.25 E-value=9.9 Score=21.99 Aligned_cols=14 Identities=14% Similarity=0.216 Sum_probs=11.7
Q ss_pred cchhhhhhHHhhhc
Q psy3838 10 SVTSVIGYQKKIGA 23 (74)
Q Consensus 10 ~~~~i~wyqkKig~ 23 (74)
-+.|+.||++.+|-
T Consensus 18 ~~~a~~fY~~~lGf 31 (163)
T d1t47a1 18 AKQAAHYYSTAFGM 31 (163)
T ss_dssp HHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHhCC
Confidence 37889999999983
No 4
>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=21.13 E-value=13 Score=20.92 Aligned_cols=14 Identities=14% Similarity=0.337 Sum_probs=12.5
Q ss_pred ccchhhhhhHHhhh
Q psy3838 9 CSVTSVIGYQKKIG 22 (74)
Q Consensus 9 ~~~~~i~wyqkKig 22 (74)
+.++|+.||++.+|
T Consensus 13 ~a~eAl~FY~~~fG 26 (137)
T d1u6la_ 13 NCREAFSCYHQHLG 26 (137)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHCC
Confidence 56789999999998
No 5
>d1i7na1 c.30.1.5 (A:113-214) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.06 E-value=25 Score=21.72 Aligned_cols=29 Identities=10% Similarity=0.181 Sum_probs=21.2
Q ss_pred ccccceecccCCceEEEeeeeeceecccCccC
Q psy3838 42 THVPKKTAKLKTELIDVDLVRVVFINDFKSIE 73 (74)
Q Consensus 42 ~~kpkk~~~iKpdLIDvDLVrGstF~KaKp~~ 73 (74)
++-.|..-.+|||.+ |||..++..+.-+|
T Consensus 58 r~gtkvvRsFkPDFv---LvRQh~~sm~~~~D 86 (102)
T d1i7na1 58 RNGTKVVRSFRPDFV---LIRQHAFGMAENED 86 (102)
T ss_dssp SSSSSEEEEECCSEE---EECSCCCCSSTTCC
T ss_pred cCCceeeeecCCCEE---EEeccccccccccc
Confidence 344566678899876 89999998776554
No 6
>d2ddha2 a.29.3.2 (A:475-655) Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.43 E-value=16 Score=22.78 Aligned_cols=22 Identities=23% Similarity=0.336 Sum_probs=16.7
Q ss_pred hhhchhHHHHHHHhhhhhccCC
Q psy3838 20 KIGAYDKQQWETTVEQRILNGF 41 (74)
Q Consensus 20 Kig~YD~q~WEKsvEq~~l~gl 41 (74)
=||+||+.+-|.-.+-..-..|
T Consensus 146 ~lG~~DG~vYe~l~~~a~~~pl 167 (181)
T d2ddha2 146 VLGRYDGNVYENLFEWAKKSPL 167 (181)
T ss_dssp STTCTTCCHHHHHHHHHHHSGG
T ss_pred HHhccCChHHHHHHHHHHhCCC
Confidence 4899999999988876543444
No 7
>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=20.28 E-value=15 Score=18.96 Aligned_cols=15 Identities=13% Similarity=0.109 Sum_probs=12.7
Q ss_pred ccchhhhhhHHhhhc
Q psy3838 9 CSVTSVIGYQKKIGA 23 (74)
Q Consensus 9 ~~~~~i~wyqkKig~ 23 (74)
....++.||++.+|.
T Consensus 12 d~~~a~~FY~~~lG~ 26 (111)
T d2pjsa1 12 EPARAQAFYGDILGM 26 (111)
T ss_dssp CGGGGHHHHTTTTCC
T ss_pred CHHHHHHHHHHhhCC
Confidence 457899999999987
No 8
>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}
Probab=20.27 E-value=16 Score=19.07 Aligned_cols=13 Identities=31% Similarity=0.325 Sum_probs=10.9
Q ss_pred chhhhhhHHhhhc
Q psy3838 11 VTSVIGYQKKIGA 23 (74)
Q Consensus 11 ~~~i~wyqkKig~ 23 (74)
+.++.||++-+|.
T Consensus 14 ~~s~~FY~~iLG~ 26 (135)
T d1f9za_ 14 QRSIDFYTKVLGM 26 (135)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCC
Confidence 6789999998875
No 9
>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=19.21 E-value=17 Score=20.93 Aligned_cols=13 Identities=8% Similarity=0.146 Sum_probs=11.7
Q ss_pred chhhhhhHHhhhc
Q psy3838 11 VTSVIGYQKKIGA 23 (74)
Q Consensus 11 ~~~i~wyqkKig~ 23 (74)
+.++.||++.+|.
T Consensus 24 e~a~~fY~~~LGf 36 (167)
T d1sqda1 24 TNVARRFSWGLGM 36 (167)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCC
Confidence 6899999999986
No 10
>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}
Probab=16.75 E-value=18 Score=18.70 Aligned_cols=15 Identities=20% Similarity=0.248 Sum_probs=12.3
Q ss_pred cchhhhhhHHhhhch
Q psy3838 10 SVTSVIGYQKKIGAY 24 (74)
Q Consensus 10 ~~~~i~wyqkKig~Y 24 (74)
-+.++.||++-+|.-
T Consensus 14 l~~s~~FY~~~LG~~ 28 (139)
T d2c21a1 14 LDRSIKFYTERLGMK 28 (139)
T ss_dssp HHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHhCCE
Confidence 378999999999854
Done!