Query psy3840
Match_columns 131
No_of_seqs 215 out of 1934
Neff 11.7
Searched_HMMs 46136
Date Fri Aug 16 18:46:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3840.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3840hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 100.0 1E-28 2.2E-33 154.3 12.3 124 3-126 122-253 (480)
2 KOG0272|consensus 100.0 3.7E-29 8E-34 157.3 8.1 123 3-125 268-392 (459)
3 KOG0272|consensus 99.9 5.2E-27 1.1E-31 147.7 9.9 123 3-125 310-435 (459)
4 KOG0266|consensus 99.9 8.3E-26 1.8E-30 149.7 15.0 120 3-122 210-334 (456)
5 KOG0279|consensus 99.9 7.2E-26 1.6E-30 136.4 12.8 127 3-129 112-243 (315)
6 KOG0271|consensus 99.9 1.6E-26 3.4E-31 144.6 10.2 124 3-126 164-294 (480)
7 KOG0263|consensus 99.9 2E-26 4.4E-31 153.6 10.4 124 3-126 500-625 (707)
8 KOG0286|consensus 99.9 1.1E-25 2.5E-30 136.4 12.4 124 7-131 155-281 (343)
9 PTZ00421 coronin; Provisional 99.9 2.2E-24 4.7E-29 143.4 17.1 120 3-122 82-212 (493)
10 KOG0279|consensus 99.9 1.9E-24 4.1E-29 130.3 12.8 122 4-126 71-198 (315)
11 KOG0284|consensus 99.9 1.5E-25 3.2E-30 140.9 7.8 124 3-126 187-312 (464)
12 KOG0263|consensus 99.9 1.2E-24 2.7E-29 145.1 11.6 124 3-126 458-583 (707)
13 KOG0285|consensus 99.9 3.5E-24 7.7E-29 133.3 11.7 126 3-128 158-285 (460)
14 KOG0319|consensus 99.9 2.8E-24 6.1E-29 143.0 11.9 124 3-126 470-595 (775)
15 KOG0266|consensus 99.9 3.3E-23 7.1E-28 137.4 15.2 124 3-126 166-294 (456)
16 KOG0284|consensus 99.9 1.3E-24 2.8E-29 136.7 8.0 123 3-125 145-269 (464)
17 KOG0286|consensus 99.9 3.3E-23 7.2E-28 125.8 13.1 123 3-126 104-235 (343)
18 PTZ00420 coronin; Provisional 99.9 2E-22 4.2E-27 135.3 17.2 119 3-122 81-211 (568)
19 KOG0273|consensus 99.9 8E-23 1.7E-27 130.6 12.6 124 3-126 242-407 (524)
20 KOG0285|consensus 99.9 1.7E-22 3.7E-27 125.9 12.8 122 3-124 200-323 (460)
21 KOG0273|consensus 99.9 2.7E-22 5.9E-27 128.2 13.7 121 3-123 366-497 (524)
22 KOG0295|consensus 99.9 2.1E-22 4.6E-27 125.2 12.8 122 4-125 243-381 (406)
23 KOG0316|consensus 99.9 2.3E-22 5.1E-27 119.3 10.7 114 4-117 25-142 (307)
24 KOG0275|consensus 99.9 7.8E-24 1.7E-28 130.9 4.6 124 3-126 220-354 (508)
25 KOG0292|consensus 99.9 2.5E-22 5.4E-27 136.7 11.8 124 3-126 16-141 (1202)
26 KOG0282|consensus 99.9 2.4E-23 5.1E-28 133.2 6.2 124 2-126 221-348 (503)
27 KOG0291|consensus 99.9 1.1E-21 2.3E-26 131.5 13.5 123 3-125 357-483 (893)
28 KOG0265|consensus 99.9 2E-21 4.3E-26 118.4 11.6 115 3-117 54-172 (338)
29 KOG0276|consensus 99.9 9.8E-22 2.1E-26 129.6 10.2 124 4-127 105-234 (794)
30 KOG0647|consensus 99.9 6E-21 1.3E-25 116.5 12.7 117 3-120 34-157 (347)
31 KOG0319|consensus 99.9 3.1E-21 6.8E-26 128.8 11.9 119 8-126 424-553 (775)
32 KOG0315|consensus 99.9 1.7E-20 3.6E-25 112.2 13.4 122 4-125 175-305 (311)
33 KOG0277|consensus 99.9 1.1E-20 2.4E-25 113.2 12.3 120 4-123 68-193 (311)
34 KOG0275|consensus 99.9 1.5E-22 3.3E-27 125.2 4.5 117 3-119 270-389 (508)
35 KOG0645|consensus 99.9 5.8E-20 1.3E-24 110.8 14.5 124 3-126 21-156 (312)
36 KOG0315|consensus 99.9 1.2E-20 2.5E-25 112.9 11.2 110 3-114 47-160 (311)
37 KOG0277|consensus 99.9 5.1E-20 1.1E-24 110.4 13.2 121 6-126 115-240 (311)
38 KOG0318|consensus 99.9 1.2E-19 2.7E-24 117.6 15.1 120 4-123 198-366 (603)
39 KOG0318|consensus 99.9 8.7E-20 1.9E-24 118.3 14.4 111 8-118 160-275 (603)
40 KOG0645|consensus 99.8 2.3E-19 5.1E-24 108.3 14.8 121 3-123 68-198 (312)
41 PLN00181 protein SPA1-RELATED; 99.8 1.9E-19 4.1E-24 126.5 16.7 119 6-125 543-666 (793)
42 KOG0265|consensus 99.8 5E-20 1.1E-24 112.4 11.8 124 4-128 98-224 (338)
43 KOG0302|consensus 99.8 5.2E-20 1.1E-24 115.4 11.8 105 4-108 265-378 (440)
44 KOG0289|consensus 99.8 1.7E-19 3.8E-24 114.7 13.5 125 4-128 311-441 (506)
45 cd00200 WD40 WD40 domain, foun 99.8 8E-19 1.7E-23 108.8 16.5 122 3-124 16-139 (289)
46 KOG0291|consensus 99.8 2.3E-19 4.9E-24 120.6 14.4 121 3-123 314-437 (893)
47 PLN00181 protein SPA1-RELATED; 99.8 8.2E-19 1.8E-23 123.3 17.2 117 3-120 490-618 (793)
48 KOG0303|consensus 99.8 7.2E-20 1.6E-24 115.4 10.6 119 3-122 89-217 (472)
49 PTZ00421 coronin; Provisional 99.8 1.1E-18 2.5E-23 116.4 16.5 122 4-125 28-173 (493)
50 KOG0310|consensus 99.8 1.2E-19 2.6E-24 116.4 11.2 123 4-127 76-203 (487)
51 KOG0276|consensus 99.8 2.8E-19 6.2E-24 118.2 12.8 123 4-126 63-189 (794)
52 KOG0293|consensus 99.8 9.9E-20 2.2E-24 115.4 10.2 106 3-108 231-342 (519)
53 cd00200 WD40 WD40 domain, foun 99.8 2E-18 4.3E-23 107.1 15.9 121 3-123 58-180 (289)
54 KOG0296|consensus 99.8 1E-18 2.2E-23 109.1 14.1 122 3-124 71-194 (399)
55 KOG0283|consensus 99.8 1.3E-19 2.7E-24 122.2 10.7 107 4-112 275-444 (712)
56 KOG0295|consensus 99.8 6.6E-19 1.4E-23 109.9 12.3 122 4-125 201-339 (406)
57 KOG0264|consensus 99.8 4.8E-19 1E-23 112.6 11.7 103 7-109 239-348 (422)
58 KOG0274|consensus 99.8 1.5E-18 3.3E-23 116.4 14.7 117 7-126 260-377 (537)
59 KOG0292|consensus 99.8 2.4E-19 5.2E-24 122.5 10.8 106 3-108 58-165 (1202)
60 KOG0306|consensus 99.8 3.8E-19 8.3E-24 119.5 11.4 124 3-126 515-640 (888)
61 KOG0269|consensus 99.8 2E-19 4.3E-24 120.9 10.0 108 4-111 142-253 (839)
62 PTZ00420 coronin; Provisional 99.8 4.9E-18 1.1E-22 114.5 16.6 105 14-118 50-166 (568)
63 KOG0310|consensus 99.8 1.1E-18 2.4E-23 112.1 12.9 122 4-126 118-244 (487)
64 KOG0264|consensus 99.8 5.5E-19 1.2E-23 112.4 11.1 120 7-126 189-322 (422)
65 KOG0308|consensus 99.8 1.8E-18 3.8E-23 114.7 13.1 122 5-126 127-261 (735)
66 KOG0267|consensus 99.8 5.1E-20 1.1E-24 123.1 5.5 120 4-123 78-199 (825)
67 KOG0283|consensus 99.8 1.4E-18 3E-23 117.2 12.1 112 3-116 376-489 (712)
68 KOG0274|consensus 99.8 6.1E-19 1.3E-23 118.3 10.3 118 5-124 298-417 (537)
69 KOG0973|consensus 99.8 1.3E-18 2.8E-23 120.1 11.9 127 4-130 21-182 (942)
70 KOG0646|consensus 99.8 3.3E-18 7.2E-23 109.5 12.9 126 4-129 89-227 (476)
71 KOG0640|consensus 99.8 1.2E-18 2.5E-23 107.4 10.4 117 3-119 223-346 (430)
72 KOG0296|consensus 99.8 4.4E-18 9.5E-23 106.3 12.9 115 3-117 113-229 (399)
73 KOG0643|consensus 99.8 5.5E-18 1.2E-22 102.4 12.8 120 4-123 18-193 (327)
74 KOG0316|consensus 99.8 1.5E-18 3.3E-23 103.3 10.2 106 4-110 67-175 (307)
75 KOG0294|consensus 99.8 3E-18 6.4E-23 105.4 11.3 110 3-112 48-161 (362)
76 KOG0269|consensus 99.8 2.9E-19 6.4E-24 120.1 7.5 124 3-126 95-226 (839)
77 KOG0640|consensus 99.8 1.5E-18 3.2E-23 107.0 9.3 115 2-117 118-255 (430)
78 KOG0305|consensus 99.8 2.7E-18 5.8E-23 112.7 11.0 121 3-125 224-348 (484)
79 KOG0289|consensus 99.8 4.8E-18 1E-22 108.3 11.8 118 3-120 354-476 (506)
80 KOG1407|consensus 99.8 8.2E-18 1.8E-22 101.3 11.8 117 3-119 113-272 (313)
81 KOG0282|consensus 99.8 1.6E-18 3.4E-23 111.4 9.1 112 3-115 265-379 (503)
82 KOG0313|consensus 99.8 2.1E-18 4.6E-23 108.2 9.5 105 4-108 308-418 (423)
83 KOG0973|consensus 99.8 4.7E-18 1E-22 117.4 11.9 114 4-117 77-210 (942)
84 KOG1445|consensus 99.8 5.8E-19 1.3E-23 117.4 7.1 108 4-111 635-753 (1012)
85 KOG0313|consensus 99.8 6.6E-18 1.4E-22 106.0 11.3 116 8-124 271-393 (423)
86 KOG0281|consensus 99.8 1.5E-18 3.3E-23 108.4 8.1 117 6-125 245-365 (499)
87 KOG0306|consensus 99.8 1.1E-17 2.5E-22 112.6 12.4 121 5-125 74-196 (888)
88 KOG0278|consensus 99.8 1.8E-18 3.9E-23 103.8 7.5 117 3-120 107-225 (334)
89 KOG0281|consensus 99.8 4.8E-19 1E-23 110.6 4.7 114 7-124 286-404 (499)
90 KOG0270|consensus 99.8 3.5E-17 7.6E-22 104.4 13.1 120 7-127 255-380 (463)
91 KOG0649|consensus 99.8 5.1E-17 1.1E-21 97.4 12.8 79 40-118 117-196 (325)
92 KOG0305|consensus 99.8 2.8E-17 6.2E-22 107.9 12.8 122 3-125 308-436 (484)
93 KOG1034|consensus 99.8 7.1E-18 1.5E-22 104.4 9.3 102 8-109 105-212 (385)
94 KOG0300|consensus 99.8 1.8E-17 4E-22 102.7 10.7 114 4-117 280-396 (481)
95 KOG1446|consensus 99.8 1.9E-16 4.1E-21 97.3 14.8 119 1-119 145-273 (311)
96 KOG4283|consensus 99.8 2.6E-17 5.6E-22 100.9 11.0 119 2-120 108-232 (397)
97 KOG0267|consensus 99.8 2.1E-18 4.5E-23 115.5 6.8 116 4-119 120-237 (825)
98 KOG0302|consensus 99.8 1.2E-17 2.7E-22 104.9 9.6 122 4-126 219-353 (440)
99 KOG1273|consensus 99.8 5.4E-17 1.2E-21 100.2 12.0 116 3-119 30-194 (405)
100 KOG0647|consensus 99.8 2.6E-17 5.6E-22 100.9 10.3 123 3-125 79-298 (347)
101 KOG0772|consensus 99.8 7.8E-18 1.7E-22 109.4 8.5 114 3-116 275-403 (641)
102 KOG0641|consensus 99.7 3E-16 6.4E-21 93.5 12.8 123 3-126 96-279 (350)
103 KOG0639|consensus 99.7 6.3E-18 1.4E-22 109.8 6.1 114 4-117 473-590 (705)
104 KOG1446|consensus 99.7 5E-16 1.1E-20 95.4 13.6 114 3-116 21-138 (311)
105 KOG0301|consensus 99.7 5.5E-17 1.2E-21 108.3 10.1 113 10-127 114-226 (745)
106 KOG0308|consensus 99.7 2.1E-16 4.6E-21 105.1 12.0 106 5-110 180-287 (735)
107 KOG0646|consensus 99.7 1.5E-16 3.3E-21 102.0 10.7 119 4-122 131-321 (476)
108 KOG0643|consensus 99.7 4.1E-16 8.9E-21 94.4 11.8 97 33-129 143-241 (327)
109 KOG0772|consensus 99.7 1E-16 2.2E-21 104.4 9.5 117 3-119 324-456 (641)
110 KOG1407|consensus 99.7 5.1E-16 1.1E-20 93.7 11.3 114 3-117 27-145 (313)
111 KOG1332|consensus 99.7 3E-16 6.5E-21 94.0 10.2 105 6-110 21-136 (299)
112 KOG1036|consensus 99.7 9E-16 2E-20 94.2 12.4 110 4-115 21-131 (323)
113 KOG0299|consensus 99.7 2E-16 4.4E-21 101.4 9.9 118 3-121 209-328 (479)
114 KOG0641|consensus 99.7 1.9E-15 4E-20 90.1 13.3 105 5-109 191-304 (350)
115 PF08662 eIF2A: Eukaryotic tra 99.7 2.9E-15 6.2E-20 89.5 14.3 110 3-117 66-187 (194)
116 KOG0301|consensus 99.7 1.1E-15 2.3E-20 102.3 13.2 112 10-126 153-265 (745)
117 KOG1009|consensus 99.7 3.8E-16 8.2E-21 98.9 10.4 117 9-125 27-170 (434)
118 KOG2394|consensus 99.7 2.8E-16 6E-21 102.7 8.8 86 3-88 297-383 (636)
119 KOG1539|consensus 99.7 4.2E-15 9.1E-20 101.3 14.6 121 4-124 456-622 (910)
120 KOG0299|consensus 99.7 2.8E-16 6E-21 100.7 8.5 124 3-126 149-292 (479)
121 KOG0293|consensus 99.7 1.7E-15 3.6E-20 96.6 11.6 125 3-127 361-489 (519)
122 KOG0294|consensus 99.7 5.6E-15 1.2E-19 91.3 12.1 115 10-126 3-133 (362)
123 KOG4283|consensus 99.7 1.7E-15 3.7E-20 93.1 9.4 105 7-111 157-279 (397)
124 KOG0270|consensus 99.7 1.5E-15 3.4E-20 97.0 9.4 103 7-109 191-318 (463)
125 KOG0649|consensus 99.7 2.2E-14 4.7E-19 86.3 13.6 112 4-117 122-244 (325)
126 KOG0278|consensus 99.6 5.4E-15 1.2E-19 89.1 10.8 108 4-113 192-302 (334)
127 KOG2394|consensus 99.6 3.8E-15 8.2E-20 97.5 10.7 123 3-125 227-379 (636)
128 KOG0639|consensus 99.6 2.2E-15 4.7E-20 98.3 8.5 117 3-121 516-634 (705)
129 KOG4378|consensus 99.6 1.1E-14 2.4E-19 94.9 11.6 122 4-126 172-299 (673)
130 KOG0642|consensus 99.6 9.4E-15 2E-19 95.9 10.9 111 2-112 300-430 (577)
131 KOG0288|consensus 99.6 1.7E-15 3.8E-20 96.2 7.3 116 4-121 227-343 (459)
132 KOG0771|consensus 99.6 1.7E-14 3.6E-19 91.7 11.6 121 3-124 151-328 (398)
133 KOG0290|consensus 99.6 1.8E-14 3.9E-19 88.4 11.1 105 5-109 160-319 (364)
134 KOG0300|consensus 99.6 3E-15 6.5E-20 93.0 7.6 119 8-126 160-320 (481)
135 KOG0268|consensus 99.6 1.3E-15 2.9E-20 95.5 6.1 111 3-113 236-350 (433)
136 KOG1408|consensus 99.6 1.6E-14 3.6E-19 97.7 11.2 106 4-109 604-714 (1080)
137 TIGR03866 PQQ_ABC_repeats PQQ- 99.6 1.6E-13 3.5E-18 86.5 15.1 119 3-122 163-293 (300)
138 KOG1273|consensus 99.6 9E-15 2E-19 90.6 9.0 78 40-117 26-104 (405)
139 KOG1274|consensus 99.6 3.5E-14 7.6E-19 97.6 12.4 116 3-118 103-228 (933)
140 KOG2096|consensus 99.6 1.6E-14 3.5E-19 89.7 9.9 103 6-108 197-308 (420)
141 KOG0288|consensus 99.6 6.4E-14 1.4E-18 89.2 12.7 111 8-119 312-428 (459)
142 KOG1036|consensus 99.6 5.5E-14 1.2E-18 86.5 11.8 103 7-111 64-166 (323)
143 KOG2048|consensus 99.6 4.1E-14 8.9E-19 94.6 11.5 124 3-126 117-251 (691)
144 KOG2048|consensus 99.6 1.4E-13 3.1E-18 92.1 13.8 111 3-114 76-190 (691)
145 KOG0307|consensus 99.6 3E-15 6.5E-20 104.5 6.2 112 10-121 82-205 (1049)
146 KOG1063|consensus 99.6 1.2E-14 2.6E-19 97.4 8.7 108 3-110 532-650 (764)
147 KOG2110|consensus 99.6 1.6E-13 3.5E-18 86.3 13.2 106 5-110 138-250 (391)
148 KOG1007|consensus 99.6 4.1E-14 8.8E-19 86.9 9.6 120 4-125 131-263 (370)
149 KOG2096|consensus 99.6 5.9E-14 1.3E-18 87.2 10.3 123 1-123 233-376 (420)
150 KOG2445|consensus 99.6 2.3E-13 5E-18 84.1 12.2 108 3-110 20-146 (361)
151 KOG0322|consensus 99.6 4.3E-14 9.3E-19 85.7 8.9 69 39-107 253-322 (323)
152 KOG3881|consensus 99.6 1.2E-13 2.5E-18 87.5 11.0 110 8-117 216-329 (412)
153 TIGR03866 PQQ_ABC_repeats PQQ- 99.6 7.3E-13 1.6E-17 83.5 15.0 108 8-117 1-112 (300)
154 KOG0268|consensus 99.6 5.2E-14 1.1E-18 88.5 9.1 107 9-117 80-227 (433)
155 KOG1332|consensus 99.6 3.6E-14 7.7E-19 85.2 8.0 118 5-122 67-209 (299)
156 KOG0321|consensus 99.6 3.4E-14 7.4E-19 94.7 8.7 103 7-109 63-176 (720)
157 KOG2919|consensus 99.6 7.9E-14 1.7E-18 86.7 9.4 118 3-120 214-340 (406)
158 KOG1007|consensus 99.5 6.6E-14 1.4E-18 86.0 8.8 104 3-107 177-288 (370)
159 KOG1539|consensus 99.5 3.8E-13 8.3E-18 92.0 13.1 114 8-121 172-289 (910)
160 KOG1034|consensus 99.5 3.2E-13 6.8E-18 84.1 11.1 64 4-67 144-211 (385)
161 KOG1445|consensus 99.5 6.4E-14 1.4E-18 94.0 8.7 116 7-122 91-215 (1012)
162 KOG0321|consensus 99.5 6.2E-14 1.4E-18 93.4 8.5 108 4-111 108-251 (720)
163 PF08662 eIF2A: Eukaryotic tra 99.5 3.5E-12 7.5E-17 76.3 15.2 112 3-117 12-142 (194)
164 KOG4328|consensus 99.5 2.1E-13 4.5E-18 87.9 10.0 105 4-108 287-399 (498)
165 KOG2106|consensus 99.5 9.9E-13 2.1E-17 86.0 13.1 104 3-110 375-479 (626)
166 KOG1009|consensus 99.5 6.5E-14 1.4E-18 89.0 7.3 108 4-111 73-198 (434)
167 KOG0303|consensus 99.5 4.4E-13 9.6E-18 85.3 10.9 106 4-110 139-251 (472)
168 KOG1272|consensus 99.5 5.1E-14 1.1E-18 91.0 6.5 115 4-118 217-333 (545)
169 KOG1310|consensus 99.5 1.4E-13 3E-18 90.9 8.4 107 3-109 57-179 (758)
170 KOG1274|consensus 99.5 4.8E-13 1E-17 92.2 11.2 115 3-117 61-177 (933)
171 KOG1188|consensus 99.5 4.2E-13 9.1E-18 83.8 9.8 101 9-109 41-197 (376)
172 KOG1524|consensus 99.5 7.1E-13 1.5E-17 87.4 11.2 121 3-125 111-232 (737)
173 KOG4328|consensus 99.5 6.5E-13 1.4E-17 85.7 9.7 124 3-126 193-375 (498)
174 KOG1408|consensus 99.5 6.8E-13 1.5E-17 90.1 10.2 119 8-126 516-689 (1080)
175 KOG0644|consensus 99.5 2.8E-14 6E-19 97.8 3.4 103 3-108 197-300 (1113)
176 KOG2110|consensus 99.5 8.3E-12 1.8E-16 78.8 14.1 123 7-131 96-226 (391)
177 KOG2055|consensus 99.5 4.2E-12 9E-17 82.2 12.8 117 3-119 220-385 (514)
178 KOG2111|consensus 99.5 2.9E-12 6.3E-17 79.5 11.3 96 14-109 155-257 (346)
179 KOG1272|consensus 99.4 1.1E-12 2.4E-17 84.9 7.9 101 4-106 259-360 (545)
180 KOG1538|consensus 99.4 6.1E-12 1.3E-16 85.2 11.6 113 3-117 19-170 (1081)
181 KOG0974|consensus 99.4 4.7E-12 1E-16 88.3 10.9 115 4-120 141-257 (967)
182 KOG2919|consensus 99.4 3.1E-12 6.6E-17 79.8 9.1 117 3-120 165-294 (406)
183 KOG2055|consensus 99.4 6E-12 1.3E-16 81.5 10.7 105 4-109 311-418 (514)
184 KOG1063|consensus 99.4 3.3E-12 7.2E-17 86.1 9.4 106 3-108 579-699 (764)
185 COG2319 FOG: WD40 repeat [Gene 99.4 7.1E-11 1.5E-15 76.6 15.5 121 3-124 162-288 (466)
186 KOG4378|consensus 99.4 2.9E-12 6.3E-17 83.9 8.7 110 7-116 90-203 (673)
187 KOG0642|consensus 99.4 6.2E-12 1.3E-16 83.0 9.6 65 4-68 352-427 (577)
188 COG2319 FOG: WD40 repeat [Gene 99.4 5.5E-11 1.2E-15 77.2 14.2 118 5-122 119-244 (466)
189 KOG4227|consensus 99.4 2E-11 4.4E-16 78.2 10.4 109 3-111 63-182 (609)
190 KOG0307|consensus 99.3 3.7E-12 8E-17 89.5 7.3 108 3-110 213-329 (1049)
191 KOG1963|consensus 99.3 2.2E-11 4.9E-16 83.7 10.7 114 2-116 211-330 (792)
192 KOG1523|consensus 99.3 3E-11 6.6E-16 75.2 10.0 107 2-108 16-130 (361)
193 KOG2445|consensus 99.3 3.5E-11 7.6E-16 74.6 10.0 113 8-121 184-334 (361)
194 KOG4547|consensus 99.3 1.6E-10 3.5E-15 76.7 13.3 119 6-126 68-190 (541)
195 KOG1188|consensus 99.3 2.7E-11 5.9E-16 75.9 9.1 80 35-115 163-249 (376)
196 KOG2695|consensus 99.3 1.4E-11 3.1E-16 77.5 7.8 117 4-120 260-388 (425)
197 KOG1524|consensus 99.3 4.3E-11 9.4E-16 79.2 9.9 116 8-125 75-191 (737)
198 KOG0290|consensus 99.3 1.2E-10 2.7E-15 71.9 10.6 102 9-112 114-231 (364)
199 KOG2106|consensus 99.3 6.2E-10 1.3E-14 73.3 14.1 112 3-115 414-528 (626)
200 KOG1517|consensus 99.3 1.1E-10 2.3E-15 82.5 10.9 111 5-117 1218-1341(1387)
201 KOG1240|consensus 99.3 4.3E-10 9.4E-15 80.4 13.7 114 4-117 1057-1234(1431)
202 KOG0650|consensus 99.3 3.3E-11 7.1E-16 80.5 7.5 103 3-105 614-732 (733)
203 KOG0280|consensus 99.3 2E-10 4.3E-15 71.0 10.3 111 4-114 129-248 (339)
204 KOG0644|consensus 99.2 2.5E-12 5.5E-17 88.5 1.8 97 30-126 183-280 (1113)
205 PF00400 WD40: WD domain, G-be 99.2 3.6E-11 7.7E-16 53.5 4.9 38 28-65 2-39 (39)
206 PRK01742 tolB translocation pr 99.2 4.8E-10 1E-14 74.7 12.3 105 3-108 210-322 (429)
207 KOG3914|consensus 99.2 1E-10 2.2E-15 74.5 8.4 98 20-117 134-232 (390)
208 PRK05137 tolB translocation pr 99.2 2E-09 4.3E-14 71.9 14.7 109 3-112 208-326 (435)
209 KOG0771|consensus 99.2 8.6E-11 1.9E-15 75.2 7.6 76 41-117 148-224 (398)
210 KOG2139|consensus 99.2 1.3E-09 2.8E-14 69.3 12.6 103 3-107 202-308 (445)
211 KOG1310|consensus 99.2 4.8E-11 1E-15 79.2 6.2 80 30-109 43-126 (758)
212 KOG1523|consensus 99.2 1.9E-10 4.2E-15 71.7 8.5 103 4-106 63-174 (361)
213 KOG0322|consensus 99.2 3.5E-11 7.7E-16 73.3 4.8 63 4-66 259-322 (323)
214 KOG0974|consensus 99.2 2.3E-10 4.9E-15 80.2 8.6 103 4-109 183-289 (967)
215 KOG2111|consensus 99.2 2.6E-09 5.7E-14 66.7 12.3 65 4-68 189-257 (346)
216 PF02239 Cytochrom_D1: Cytochr 99.2 5.3E-09 1.2E-13 68.4 14.3 109 9-118 6-118 (369)
217 KOG2139|consensus 99.2 2.7E-09 5.8E-14 67.9 12.2 103 4-108 148-268 (445)
218 KOG2321|consensus 99.2 1.6E-09 3.5E-14 72.4 11.4 111 5-116 143-266 (703)
219 PRK03629 tolB translocation pr 99.1 8.3E-09 1.8E-13 68.9 14.8 109 3-112 205-323 (429)
220 KOG2321|consensus 99.1 7.2E-10 1.6E-14 74.0 9.4 116 4-119 183-313 (703)
221 PRK04922 tolB translocation pr 99.1 1E-08 2.2E-13 68.6 15.0 108 3-111 210-327 (433)
222 KOG1517|consensus 99.1 2.2E-09 4.7E-14 76.2 11.8 107 4-110 1173-1289(1387)
223 KOG0650|consensus 99.1 1E-09 2.2E-14 73.6 9.3 82 28-110 391-474 (733)
224 PRK01742 tolB translocation pr 99.1 3.5E-09 7.5E-14 70.7 12.0 107 3-113 254-366 (429)
225 COG4946 Uncharacterized protei 99.1 1.2E-08 2.7E-13 67.2 14.0 113 5-117 368-486 (668)
226 KOG1587|consensus 99.1 9.5E-10 2.1E-14 74.6 9.1 106 4-109 406-517 (555)
227 KOG0280|consensus 99.1 1.5E-09 3.2E-14 67.2 8.8 102 6-109 176-285 (339)
228 PRK02889 tolB translocation pr 99.1 1.5E-08 3.2E-13 67.7 14.1 107 3-110 202-318 (427)
229 PRK01029 tolB translocation pr 99.1 1.5E-08 3.2E-13 67.6 13.8 114 3-117 287-412 (428)
230 PRK04922 tolB translocation pr 99.1 2.2E-08 4.7E-13 67.0 14.3 110 3-113 254-373 (433)
231 PF00400 WD40: WD domain, G-be 99.1 1E-09 2.2E-14 48.7 5.5 38 69-106 1-39 (39)
232 TIGR02800 propeller_TolB tol-p 99.1 3.8E-08 8.2E-13 65.4 15.1 109 3-112 196-314 (417)
233 KOG1538|consensus 99.1 2E-09 4.3E-14 73.5 8.8 77 39-117 14-91 (1081)
234 PRK03629 tolB translocation pr 99.1 2.6E-08 5.7E-13 66.5 14.0 109 3-112 249-367 (429)
235 PRK11028 6-phosphogluconolacto 99.0 3.4E-08 7.4E-13 63.8 13.5 106 3-109 86-206 (330)
236 PRK05137 tolB translocation pr 99.0 5.3E-08 1.2E-12 65.2 14.6 93 19-112 183-282 (435)
237 PRK00178 tolB translocation pr 99.0 6.5E-08 1.4E-12 64.6 14.9 109 3-112 205-323 (430)
238 PRK02889 tolB translocation pr 99.0 1.5E-08 3.2E-13 67.7 11.7 110 3-113 246-365 (427)
239 KOG1409|consensus 99.0 1.4E-09 3E-14 68.7 6.3 66 3-68 204-271 (404)
240 KOG4532|consensus 99.0 5.9E-08 1.3E-12 59.8 13.0 115 3-117 165-291 (344)
241 KOG4497|consensus 99.0 9.4E-09 2E-13 64.9 9.8 110 3-113 15-127 (447)
242 PRK11028 6-phosphogluconolacto 99.0 3.6E-08 7.9E-13 63.6 12.9 105 3-108 181-304 (330)
243 KOG1587|consensus 99.0 7.3E-09 1.6E-13 70.4 9.9 105 5-110 357-474 (555)
244 KOG3881|consensus 99.0 2.5E-08 5.5E-13 63.9 10.8 111 5-115 158-284 (412)
245 PF11768 DUF3312: Protein of u 99.0 2.6E-08 5.7E-13 66.8 11.0 74 35-110 257-331 (545)
246 PF02239 Cytochrom_D1: Cytochr 98.9 2E-07 4.3E-12 61.2 14.8 109 3-112 43-162 (369)
247 PRK04792 tolB translocation pr 98.9 1.7E-07 3.7E-12 63.0 14.5 109 3-112 224-342 (448)
248 TIGR02800 propeller_TolB tol-p 98.9 2.6E-07 5.7E-12 61.4 14.1 108 3-111 240-357 (417)
249 KOG2315|consensus 98.9 1.1E-07 2.5E-12 63.4 11.8 101 4-108 278-390 (566)
250 KOG1963|consensus 98.9 1.3E-07 2.9E-12 65.8 11.9 116 2-117 257-384 (792)
251 KOG1240|consensus 98.8 3.5E-08 7.7E-13 71.1 9.0 87 23-109 1034-1129(1431)
252 PRK00178 tolB translocation pr 98.8 5.3E-07 1.2E-11 60.3 14.3 109 3-112 249-367 (430)
253 KOG3914|consensus 98.8 1.4E-08 3.1E-13 65.1 6.3 72 3-75 158-231 (390)
254 PF15492 Nbas_N: Neuroblastoma 98.8 5.4E-07 1.2E-11 55.9 12.5 45 79-123 229-274 (282)
255 PRK01029 tolB translocation pr 98.8 5.6E-07 1.2E-11 60.3 13.4 111 3-113 237-364 (428)
256 KOG4547|consensus 98.8 1.6E-07 3.6E-12 62.8 10.3 102 5-108 111-220 (541)
257 KOG4227|consensus 98.8 2.6E-07 5.6E-12 59.9 10.1 108 3-110 112-227 (609)
258 PRK04792 tolB translocation pr 98.7 1.5E-06 3.3E-11 58.6 13.8 109 3-112 268-386 (448)
259 PF11768 DUF3312: Protein of u 98.7 3E-07 6.5E-12 61.9 9.7 66 3-69 266-331 (545)
260 KOG4714|consensus 98.7 1.4E-07 3E-12 57.9 7.4 63 6-68 190-255 (319)
261 KOG1354|consensus 98.7 5E-08 1.1E-12 61.9 5.3 116 4-120 172-314 (433)
262 KOG1064|consensus 98.7 3.9E-08 8.5E-13 73.4 5.5 112 3-116 2258-2374(2439)
263 KOG1064|consensus 98.7 2.4E-08 5.3E-13 74.4 4.0 93 16-117 2313-2407(2439)
264 PLN02919 haloacid dehalogenase 98.7 2.9E-06 6.2E-11 62.5 14.4 110 3-112 746-892 (1057)
265 KOG4714|consensus 98.7 6.9E-08 1.5E-12 59.2 5.1 72 38-109 180-255 (319)
266 KOG4190|consensus 98.6 2E-07 4.3E-12 63.0 6.8 110 7-118 746-916 (1034)
267 KOG1409|consensus 98.6 6.4E-07 1.4E-11 57.0 8.3 84 27-110 187-272 (404)
268 KOG2695|consensus 98.6 1.3E-07 2.8E-12 60.1 5.2 104 17-122 233-346 (425)
269 PF10282 Lactonase: Lactonase, 98.6 6.2E-06 1.3E-10 53.8 12.9 112 3-114 198-330 (345)
270 KOG1645|consensus 98.6 4.7E-07 1E-11 58.6 7.5 78 32-110 188-268 (463)
271 TIGR02658 TTQ_MADH_Hv methylam 98.6 3.4E-05 7.4E-10 50.4 15.7 109 7-117 205-339 (352)
272 KOG4640|consensus 98.6 5.8E-07 1.3E-11 61.1 7.7 86 3-88 27-114 (665)
273 KOG3621|consensus 98.5 6.6E-07 1.4E-11 61.5 7.9 107 3-109 40-155 (726)
274 PRK04043 tolB translocation pr 98.5 1.5E-05 3.2E-10 53.4 14.0 109 3-112 194-313 (419)
275 KOG4640|consensus 98.5 1.9E-06 4.1E-11 58.7 8.9 78 37-115 20-99 (665)
276 KOG2066|consensus 98.5 5.3E-06 1.1E-10 58.0 11.0 110 6-118 81-197 (846)
277 KOG0309|consensus 98.4 2.2E-06 4.8E-11 59.7 8.0 117 9-125 82-206 (1081)
278 COG2706 3-carboxymuconate cycl 98.4 5.4E-05 1.2E-09 48.6 13.4 107 3-109 95-222 (346)
279 KOG1334|consensus 98.4 2E-06 4.3E-11 57.0 7.0 111 4-114 150-269 (559)
280 PLN02919 haloacid dehalogenase 98.4 4.9E-05 1.1E-09 56.3 14.7 110 4-113 690-838 (1057)
281 TIGR02658 TTQ_MADH_Hv methylam 98.4 0.00016 3.5E-09 47.3 15.6 110 7-118 11-146 (352)
282 TIGR03300 assembly_YfgL outer 98.4 4.6E-05 9.9E-10 50.3 13.1 109 8-121 241-351 (377)
283 COG5170 CDC55 Serine/threonine 98.4 7.9E-07 1.7E-11 56.2 4.5 116 3-119 179-321 (460)
284 KOG1334|consensus 98.3 1.3E-06 2.8E-11 57.9 5.4 107 3-109 343-467 (559)
285 smart00320 WD40 WD40 repeats. 98.3 2.2E-06 4.8E-11 36.6 4.6 37 29-65 4-40 (40)
286 KOG2041|consensus 98.3 5.4E-06 1.2E-10 57.8 8.1 102 3-104 21-141 (1189)
287 KOG4532|consensus 98.3 5.3E-05 1.1E-09 47.2 11.5 100 10-110 130-235 (344)
288 TIGR03300 assembly_YfgL outer 98.3 5.7E-05 1.2E-09 49.9 12.6 109 7-118 64-173 (377)
289 KOG1354|consensus 98.3 1.3E-05 2.8E-10 51.4 8.8 105 4-108 33-193 (433)
290 PRK04043 tolB translocation pr 98.3 0.00011 2.3E-09 49.4 13.7 107 3-112 239-361 (419)
291 PF10282 Lactonase: Lactonase, 98.3 0.00012 2.6E-09 47.9 13.7 106 3-108 93-222 (345)
292 KOG2314|consensus 98.3 1.9E-05 4.2E-10 53.5 9.9 105 3-110 217-336 (698)
293 KOG1912|consensus 98.3 3.8E-05 8.3E-10 54.1 11.4 116 4-121 23-156 (1062)
294 KOG4497|consensus 98.2 4E-05 8.6E-10 49.1 9.7 99 2-101 324-425 (447)
295 PF13360 PQQ_2: PQQ-like domai 98.2 7E-05 1.5E-09 46.1 10.8 111 7-120 35-152 (238)
296 KOG1275|consensus 98.2 1.6E-05 3.6E-10 56.6 8.6 98 6-106 185-294 (1118)
297 KOG3617|consensus 98.2 8.4E-06 1.8E-10 57.9 6.9 107 1-108 20-131 (1416)
298 PF04762 IKI3: IKI3 family; I 98.2 7.9E-05 1.7E-09 54.5 12.0 107 3-111 216-336 (928)
299 KOG2315|consensus 98.2 9.8E-05 2.1E-09 50.0 11.5 96 19-117 252-353 (566)
300 KOG2444|consensus 98.1 2.9E-05 6.4E-10 47.1 7.4 103 7-109 69-178 (238)
301 KOG2079|consensus 98.1 2.5E-05 5.5E-10 56.5 8.1 94 8-101 99-198 (1206)
302 KOG0309|consensus 98.1 7.1E-06 1.5E-10 57.3 5.3 104 7-110 126-234 (1081)
303 smart00320 WD40 WD40 repeats. 98.1 1.9E-05 4E-10 33.5 5.0 36 71-106 4-40 (40)
304 PF14783 BBS2_Mid: Ciliary BBS 98.1 0.00027 5.9E-09 38.4 12.5 89 9-103 16-109 (111)
305 KOG2066|consensus 98.1 6.7E-05 1.4E-09 52.8 9.5 91 7-106 48-144 (846)
306 PF08450 SGL: SMP-30/Gluconola 98.1 0.00073 1.6E-08 42.1 16.0 122 4-127 93-232 (246)
307 PRK02888 nitrous-oxide reducta 98.0 0.00029 6.3E-09 49.1 11.6 104 3-109 283-405 (635)
308 KOG4190|consensus 98.0 4.1E-06 8.9E-11 56.9 2.7 84 30-114 728-818 (1034)
309 KOG1832|consensus 98.0 6.3E-06 1.4E-10 58.8 2.8 110 3-116 1108-1222(1516)
310 COG4946 Uncharacterized protei 98.0 0.002 4.4E-08 43.5 14.8 102 7-111 331-434 (668)
311 PF07433 DUF1513: Protein of u 97.9 0.0016 3.4E-08 41.8 13.4 115 3-117 57-256 (305)
312 PF08553 VID27: VID27 cytoplas 97.9 0.00055 1.2E-08 49.2 11.6 99 8-107 542-646 (794)
313 PF13360 PQQ_2: PQQ-like domai 97.9 0.0015 3.3E-08 40.2 15.2 106 7-115 121-237 (238)
314 COG2706 3-carboxymuconate cycl 97.9 0.0021 4.5E-08 41.6 13.0 106 3-108 197-321 (346)
315 PF12894 Apc4_WD40: Anaphase-p 97.9 0.00011 2.3E-09 33.8 5.3 34 37-71 11-44 (47)
316 COG0823 TolB Periplasmic compo 97.9 0.00065 1.4E-08 45.8 10.9 109 2-111 243-361 (425)
317 KOG1912|consensus 97.9 0.00031 6.8E-09 49.8 9.4 100 8-107 79-185 (1062)
318 COG5354 Uncharacterized protei 97.8 0.00013 2.7E-09 49.1 7.1 102 3-107 39-159 (561)
319 PRK11138 outer membrane biogen 97.8 0.0014 3E-08 43.8 12.1 106 8-118 256-363 (394)
320 KOG0882|consensus 97.8 0.00023 5E-09 47.4 8.1 108 10-117 113-240 (558)
321 COG5170 CDC55 Serine/threonine 97.8 0.00021 4.5E-09 45.7 7.5 106 4-109 34-202 (460)
322 KOG4649|consensus 97.8 0.0024 5.2E-08 40.1 12.6 108 8-117 23-132 (354)
323 PRK11138 outer membrane biogen 97.8 0.00085 1.8E-08 44.7 10.8 110 7-118 68-188 (394)
324 KOG1275|consensus 97.8 0.00019 4.1E-09 51.6 7.8 106 7-115 146-261 (1118)
325 KOG2114|consensus 97.8 0.00037 8.1E-09 49.7 8.8 106 1-106 28-153 (933)
326 KOG4649|consensus 97.8 0.0019 4.1E-08 40.5 10.8 95 8-102 63-159 (354)
327 KOG1645|consensus 97.8 0.00029 6.2E-09 46.3 7.5 67 3-70 200-269 (463)
328 KOG2314|consensus 97.6 0.00033 7.1E-09 47.9 6.8 77 39-118 212-300 (698)
329 PF04762 IKI3: IKI3 family; I 97.6 0.0034 7.4E-08 46.4 12.4 104 3-107 263-378 (928)
330 COG5354 Uncharacterized protei 97.6 0.0018 3.9E-08 43.9 9.9 102 3-108 281-395 (561)
331 KOG1920|consensus 97.6 0.0023 4.9E-08 47.5 10.8 108 3-110 202-324 (1265)
332 PRK02888 nitrous-oxide reducta 97.5 0.01 2.2E-07 41.8 12.5 52 59-111 296-354 (635)
333 KOG1008|consensus 97.5 2.7E-05 5.8E-10 53.7 0.3 104 5-108 67-184 (783)
334 PF00930 DPPIV_N: Dipeptidyl p 97.5 0.002 4.3E-08 42.4 8.7 100 5-105 1-128 (353)
335 PF14655 RAB3GAP2_N: Rab3 GTPa 97.4 0.0093 2E-07 40.2 11.1 83 36-118 306-408 (415)
336 KOG1008|consensus 97.4 7.9E-05 1.7E-09 51.5 1.5 104 4-108 162-275 (783)
337 PF12894 Apc4_WD40: Anaphase-p 97.4 0.0011 2.5E-08 30.4 4.9 34 79-113 11-45 (47)
338 PF04053 Coatomer_WDAD: Coatom 97.4 0.0053 1.2E-07 41.7 9.8 108 3-120 39-146 (443)
339 KOG2041|consensus 97.4 0.0013 2.7E-08 46.7 6.9 75 36-110 13-103 (1189)
340 KOG2114|consensus 97.4 0.03 6.4E-07 40.7 13.8 118 4-122 133-258 (933)
341 KOG2079|consensus 97.3 0.00098 2.1E-08 48.9 5.9 80 48-127 98-179 (1206)
342 PRK13616 lipoprotein LpqB; Pro 97.3 0.011 2.3E-07 41.8 10.8 102 3-107 403-524 (591)
343 PF08450 SGL: SMP-30/Gluconola 97.3 0.017 3.8E-07 36.0 15.4 101 4-108 7-123 (246)
344 PF06977 SdiA-regulated: SdiA- 97.2 0.014 3E-07 36.7 9.9 102 3-105 124-247 (248)
345 PF14783 BBS2_Mid: Ciliary BBS 97.2 0.0097 2.1E-07 32.5 11.8 64 40-106 2-69 (111)
346 PF06433 Me-amine-dh_H: Methyl 97.2 0.025 5.4E-07 37.1 11.4 115 7-122 194-334 (342)
347 COG0823 TolB Periplasmic compo 97.2 0.0061 1.3E-07 41.3 8.8 108 3-111 199-317 (425)
348 KOG1832|consensus 97.2 0.0007 1.5E-08 49.0 4.5 91 27-117 1091-1185(1516)
349 PF10313 DUF2415: Uncharacteri 97.2 0.0045 9.8E-08 27.7 5.4 32 38-69 1-35 (43)
350 PF15492 Nbas_N: Neuroblastoma 97.1 0.026 5.7E-07 35.8 13.2 102 4-107 5-126 (282)
351 PF12234 Rav1p_C: RAVE protein 97.1 0.041 8.8E-07 39.1 11.9 97 10-107 42-155 (631)
352 KOG2395|consensus 97.0 0.01 2.3E-07 40.8 8.3 97 11-108 397-500 (644)
353 PRK13616 lipoprotein LpqB; Pro 97.0 0.027 5.8E-07 39.9 10.4 96 3-104 356-472 (591)
354 COG3386 Gluconolactonase [Carb 97.0 0.045 9.7E-07 35.6 12.1 99 20-119 145-253 (307)
355 KOG3617|consensus 97.0 0.0011 2.5E-08 47.8 3.7 65 3-67 66-131 (1416)
356 PF04053 Coatomer_WDAD: Coatom 96.9 0.022 4.8E-07 38.8 9.5 97 4-108 76-173 (443)
357 KOG0882|consensus 96.9 0.0035 7.7E-08 42.1 5.3 104 7-110 19-132 (558)
358 cd00216 PQQ_DH Dehydrogenases 96.9 0.071 1.5E-06 36.9 11.8 103 10-118 303-434 (488)
359 PF07433 DUF1513: Protein of u 96.9 0.055 1.2E-06 35.0 13.2 113 4-116 12-154 (305)
360 cd00216 PQQ_DH Dehydrogenases 96.9 0.061 1.3E-06 37.2 11.4 110 8-118 61-193 (488)
361 PF14870 PSII_BNR: Photosynthe 96.8 0.059 1.3E-06 34.9 12.3 98 5-103 153-256 (302)
362 COG3391 Uncharacterized conser 96.8 0.074 1.6E-06 35.6 14.4 109 4-113 81-195 (381)
363 PF08553 VID27: VID27 cytoplas 96.8 0.065 1.4E-06 39.2 11.2 100 8-107 493-605 (794)
364 KOG3621|consensus 96.7 0.0048 1.1E-07 43.4 5.3 66 3-68 83-155 (726)
365 PF00780 CNH: CNH domain; Int 96.7 0.073 1.6E-06 33.7 13.5 111 6-120 5-139 (275)
366 PF07569 Hira: TUP1-like enhan 96.6 0.075 1.6E-06 32.8 9.6 68 46-113 19-100 (219)
367 COG3391 Uncharacterized conser 96.5 0.13 2.9E-06 34.5 14.1 114 3-117 166-292 (381)
368 PF03178 CPSF_A: CPSF A subuni 96.4 0.074 1.6E-06 34.6 8.9 98 8-108 98-202 (321)
369 KOG2444|consensus 96.3 0.012 2.5E-07 36.2 4.5 62 7-68 113-178 (238)
370 COG3386 Gluconolactonase [Carb 96.3 0.16 3.5E-06 33.1 10.7 86 3-89 169-264 (307)
371 KOG4499|consensus 96.3 0.13 2.9E-06 32.2 11.1 87 40-126 160-259 (310)
372 PF00930 DPPIV_N: Dipeptidyl p 96.3 0.032 6.9E-07 36.9 6.8 68 46-114 1-77 (353)
373 PF08596 Lgl_C: Lethal giant l 96.2 0.23 4.9E-06 33.6 10.4 77 39-115 3-122 (395)
374 TIGR03074 PQQ_membr_DH membran 96.1 0.34 7.5E-06 35.6 13.5 109 8-117 194-353 (764)
375 PF07569 Hira: TUP1-like enhan 96.1 0.11 2.4E-06 32.1 8.2 63 5-68 19-96 (219)
376 COG3490 Uncharacterized protei 96.1 0.19 4.2E-06 32.4 9.6 55 3-57 120-181 (366)
377 PF10313 DUF2415: Uncharacteri 96.1 0.042 9.1E-07 24.6 5.3 30 80-109 1-34 (43)
378 TIGR03075 PQQ_enz_alc_DH PQQ-d 96.1 0.31 6.7E-06 34.3 13.6 62 59-120 441-502 (527)
379 KOG1920|consensus 96.0 0.21 4.5E-06 38.0 10.1 102 3-106 248-363 (1265)
380 KOG1916|consensus 95.9 0.005 1.1E-07 44.9 2.0 102 18-120 153-282 (1283)
381 PF04841 Vps16_N: Vps16, N-ter 95.9 0.33 7.1E-06 33.0 11.1 64 4-68 36-110 (410)
382 PF06977 SdiA-regulated: SdiA- 95.8 0.24 5.2E-06 31.3 11.2 106 3-108 28-147 (248)
383 PF11715 Nup160: Nucleoporin N 95.8 0.15 3.2E-06 35.8 8.7 37 39-75 216-256 (547)
384 PF02897 Peptidase_S9_N: Proly 95.7 0.37 8E-06 32.6 16.2 107 3-110 130-262 (414)
385 TIGR03075 PQQ_enz_alc_DH PQQ-d 95.7 0.45 9.7E-06 33.5 11.7 108 8-117 69-198 (527)
386 PF08728 CRT10: CRT10; InterP 95.7 0.29 6.2E-06 35.6 9.4 101 7-107 113-245 (717)
387 PF10168 Nup88: Nuclear pore c 95.6 0.61 1.3E-05 34.2 13.1 72 39-110 86-181 (717)
388 KOG1916|consensus 95.3 0.018 4E-07 42.2 3.0 108 5-113 192-328 (1283)
389 KOG4499|consensus 95.3 0.39 8.5E-06 30.2 10.6 87 4-90 165-264 (310)
390 PF11715 Nup160: Nucleoporin N 95.2 0.29 6.2E-06 34.5 8.3 73 47-119 156-259 (547)
391 PHA02713 hypothetical protein; 94.8 0.43 9.4E-06 33.8 8.3 71 48-120 463-545 (557)
392 KOG3630|consensus 94.8 0.19 4.1E-06 38.2 6.6 69 38-107 156-227 (1405)
393 PF14655 RAB3GAP2_N: Rab3 GTPa 94.7 0.68 1.5E-05 31.6 8.7 74 4-77 315-408 (415)
394 PF12234 Rav1p_C: RAVE protein 94.7 0.93 2E-05 32.7 9.6 68 39-106 31-102 (631)
395 KOG2395|consensus 94.6 0.68 1.5E-05 32.5 8.5 95 12-107 350-458 (644)
396 PF08596 Lgl_C: Lethal giant l 94.6 0.91 2E-05 30.8 12.3 72 36-108 85-173 (395)
397 TIGR02276 beta_rpt_yvtn 40-res 94.5 0.16 3.6E-06 22.0 5.4 37 89-125 1-39 (42)
398 PF10647 Gmad1: Lipoprotein Lp 94.5 0.72 1.6E-05 29.2 11.6 103 3-107 30-143 (253)
399 smart00564 PQQ beta-propeller 94.4 0.15 3.2E-06 20.9 3.8 27 90-116 6-32 (33)
400 COG1520 FOG: WD40-like repeat 94.3 0.99 2.2E-05 30.1 11.7 108 9-117 69-180 (370)
401 KOG2247|consensus 94.1 0.013 2.9E-07 40.0 -0.0 100 4-103 82-183 (615)
402 KOG2377|consensus 94.1 1.3 2.8E-05 30.8 10.0 91 9-99 34-132 (657)
403 TIGR02276 beta_rpt_yvtn 40-res 94.1 0.21 4.6E-06 21.7 5.8 31 47-77 1-32 (42)
404 PF04841 Vps16_N: Vps16, N-ter 94.0 1.3 2.8E-05 30.2 14.4 56 37-92 216-272 (410)
405 PF02897 Peptidase_S9_N: Proly 93.8 1.4 3E-05 29.8 9.7 69 41-110 127-212 (414)
406 PF14870 PSII_BNR: Photosynthe 93.8 1.2 2.6E-05 29.1 12.7 70 37-106 144-213 (302)
407 PF00780 CNH: CNH domain; Int 93.5 0.84 1.8E-05 28.9 7.2 64 47-112 5-68 (275)
408 PF15390 DUF4613: Domain of un 93.5 2 4.4E-05 30.7 10.1 100 8-108 72-186 (671)
409 PF06433 Me-amine-dh_H: Methyl 93.3 1.3 2.8E-05 29.5 7.6 58 20-78 271-331 (342)
410 PF01011 PQQ: PQQ enzyme repea 93.3 0.32 7E-06 20.9 4.4 28 92-119 2-29 (38)
411 KOG2247|consensus 93.2 0.0047 1E-07 42.1 -3.3 106 4-110 42-149 (615)
412 COG5167 VID27 Protein involved 93.0 2 4.2E-05 30.4 8.5 61 48-108 572-632 (776)
413 PHA02713 hypothetical protein; 92.8 2 4.3E-05 30.6 8.7 52 7-58 351-408 (557)
414 PF10168 Nup88: Nuclear pore c 92.6 3.2 6.9E-05 30.7 10.1 66 4-69 92-181 (717)
415 PLN00033 photosystem II stabil 92.5 2.4 5.1E-05 29.0 11.8 67 37-105 280-353 (398)
416 PF05096 Glu_cyclase_2: Glutam 92.4 1.9 4.1E-05 27.6 12.8 109 6-117 54-166 (264)
417 COG1520 FOG: WD40-like repeat 92.3 2.2 4.8E-05 28.5 8.1 71 50-120 69-141 (370)
418 PF14583 Pectate_lyase22: Olig 92.2 2.5 5.5E-05 28.6 8.9 77 44-120 42-122 (386)
419 COG5167 VID27 Protein involved 92.1 1.2 2.6E-05 31.4 6.6 60 7-67 572-632 (776)
420 PF03178 CPSF_A: CPSF A subuni 92.0 2.3 5E-05 27.8 10.0 97 8-108 42-157 (321)
421 PF10647 Gmad1: Lipoprotein Lp 91.7 2.2 4.9E-05 27.0 11.8 93 3-95 72-181 (253)
422 COG3204 Uncharacterized protei 91.6 2.6 5.7E-05 27.5 8.3 76 35-110 83-160 (316)
423 PF05935 Arylsulfotrans: Aryls 91.4 3.7 7.9E-05 28.8 13.2 113 5-120 156-313 (477)
424 PF14781 BBS2_N: Ciliary BBSom 91.3 1.7 3.7E-05 24.8 12.4 111 4-117 6-134 (136)
425 COG4590 ABC-type uncharacteriz 91.3 3.5 7.6E-05 28.8 8.0 106 7-113 279-391 (733)
426 COG3204 Uncharacterized protei 91.1 3 6.5E-05 27.2 10.4 105 3-108 92-210 (316)
427 KOG4441|consensus 91.0 4.5 9.7E-05 29.1 9.6 104 7-111 380-502 (571)
428 PF10214 Rrn6: RNA polymerase 90.8 5.2 0.00011 29.8 9.2 74 38-112 146-236 (765)
429 KOG3630|consensus 90.8 1.7 3.6E-05 33.6 6.6 81 11-92 171-256 (1405)
430 COG3490 Uncharacterized protei 90.4 3.6 7.7E-05 27.0 9.9 49 44-92 120-174 (366)
431 PHA03098 kelch-like protein; P 90.2 5 0.00011 28.3 9.0 102 7-111 342-467 (534)
432 PF05694 SBP56: 56kDa selenium 90.1 4.8 0.0001 27.9 13.6 113 7-119 86-241 (461)
433 KOG3616|consensus 90.1 1.6 3.6E-05 32.4 6.0 67 38-106 15-81 (1636)
434 TIGR02604 Piru_Ver_Nterm putat 89.9 4.3 9.4E-05 27.2 12.5 90 3-94 20-138 (367)
435 KOG4460|consensus 89.9 5.6 0.00012 28.4 8.6 75 39-113 105-203 (741)
436 PRK13684 Ycf48-like protein; P 89.8 4.2 9.2E-05 27.0 12.1 97 5-103 181-283 (334)
437 PF03088 Str_synth: Strictosid 89.6 1.9 4.2E-05 22.7 5.2 42 16-57 35-76 (89)
438 TIGR02171 Fb_sc_TIGR02171 Fibr 89.5 7.7 0.00017 29.5 9.4 74 17-90 328-409 (912)
439 PF14269 Arylsulfotran_2: Aryl 89.4 4.4 9.4E-05 26.5 7.6 68 40-107 146-219 (299)
440 KOG2377|consensus 89.3 5.8 0.00013 27.8 8.7 87 4-92 74-166 (657)
441 PF14761 HPS3_N: Hermansky-Pud 88.6 4.2 9.1E-05 25.3 6.4 99 9-109 29-164 (215)
442 PF15390 DUF4613: Domain of un 88.4 7.7 0.00017 28.1 10.8 65 4-68 120-187 (671)
443 KOG3616|consensus 88.1 2.1 4.6E-05 31.8 5.5 59 5-65 23-81 (1636)
444 PF14583 Pectate_lyase22: Olig 87.5 7.1 0.00015 26.6 13.4 85 3-87 42-130 (386)
445 KOG4441|consensus 87.5 8.8 0.00019 27.7 9.3 102 7-110 332-454 (571)
446 KOG2280|consensus 87.0 8.7 0.00019 28.6 7.8 49 19-68 65-113 (829)
447 PHA03098 kelch-like protein; P 87.0 8.7 0.00019 27.2 9.9 103 7-112 389-515 (534)
448 TIGR03118 PEPCTERM_chp_1 conse 87.0 6.8 0.00015 25.9 8.0 77 13-89 217-307 (336)
449 PF12657 TFIIIC_delta: Transcr 86.1 5.2 0.00011 23.7 8.2 29 80-108 86-121 (173)
450 TIGR03074 PQQ_membr_DH membran 86.0 13 0.00027 28.0 9.5 69 49-117 194-287 (764)
451 PRK10115 protease 2; Provision 85.3 13 0.00028 27.5 9.6 70 39-110 128-209 (686)
452 TIGR02604 Piru_Ver_Nterm putat 85.1 9.3 0.0002 25.7 10.0 58 39-97 125-201 (367)
453 PF07676 PD40: WD40-like Beta 84.3 2.3 5E-05 18.0 5.1 27 79-105 8-38 (39)
454 KOG4460|consensus 84.2 13 0.00028 26.7 7.6 69 4-72 111-203 (741)
455 PF07995 GSDH: Glucose / Sorbo 84.0 5.3 0.00011 26.5 5.6 56 7-62 270-330 (331)
456 PF12341 DUF3639: Protein of u 82.4 2.4 5.1E-05 16.9 2.2 22 3-24 6-27 (27)
457 PF13570 PQQ_3: PQQ-like domai 82.1 3.1 6.6E-05 17.9 4.2 20 90-109 21-40 (40)
458 PF02333 Phytase: Phytase; In 81.9 14 0.0003 25.3 12.6 120 6-128 66-216 (381)
459 PHA02790 Kelch-like protein; P 81.6 16 0.00034 25.7 9.6 100 7-111 362-473 (480)
460 PF05935 Arylsulfotrans: Aryls 81.6 16 0.00034 25.7 10.3 98 16-117 126-240 (477)
461 PF01436 NHL: NHL repeat; Int 79.3 3.2 7E-05 16.4 4.0 23 41-63 5-27 (28)
462 PF14779 BBS1: Ciliary BBSome 79.0 14 0.00031 23.7 6.8 69 37-105 176-255 (257)
463 PF07995 GSDH: Glucose / Sorbo 79.0 16 0.00035 24.3 9.9 45 3-48 8-59 (331)
464 COG5290 IkappaB kinase complex 78.1 7.6 0.00016 29.3 4.9 87 2-91 252-348 (1243)
465 PRK10115 protease 2; Provision 76.1 30 0.00064 25.8 15.7 103 3-107 133-254 (686)
466 PRK13684 Ycf48-like protein; P 75.1 22 0.00047 23.7 10.9 65 37-103 172-238 (334)
467 KOG1900|consensus 75.1 42 0.0009 27.0 8.1 89 15-103 96-202 (1311)
468 KOG3535|consensus 74.9 22 0.00048 24.7 6.1 55 51-111 94-154 (557)
469 TIGR03118 PEPCTERM_chp_1 conse 73.5 24 0.00052 23.5 8.1 70 39-108 24-118 (336)
470 PF08954 DUF1900: Domain of un 72.5 9.8 0.00021 21.8 3.7 45 3-47 17-66 (136)
471 COG3823 Glutamine cyclotransfe 72.4 21 0.00046 22.5 7.1 100 8-109 56-159 (262)
472 KOG2280|consensus 72.3 26 0.00057 26.3 6.3 48 60-108 65-112 (829)
473 PF10214 Rrn6: RNA polymerase 70.1 45 0.00098 25.2 11.9 103 4-109 153-277 (765)
474 PF01731 Arylesterase: Arylest 69.7 14 0.00031 19.3 6.0 29 39-67 55-84 (86)
475 PF12768 Rax2: Cortical protei 69.7 28 0.00062 22.7 5.8 53 59-111 16-75 (281)
476 PF14761 HPS3_N: Hermansky-Pud 69.4 25 0.00054 22.0 6.2 46 50-96 29-77 (215)
477 PF07250 Glyoxal_oxid_N: Glyox 68.6 25 0.00053 22.5 5.1 28 41-68 70-100 (243)
478 KOG3522|consensus 68.2 32 0.0007 26.2 6.1 72 37-111 626-700 (925)
479 PF12768 Rax2: Cortical protei 68.0 31 0.00068 22.6 11.5 93 17-110 15-125 (281)
480 KOG3611|consensus 67.3 51 0.0011 24.9 7.0 57 7-63 424-489 (737)
481 PF14781 BBS2_N: Ciliary BBSom 67.1 22 0.00048 20.5 9.8 67 44-111 5-84 (136)
482 PHA02790 Kelch-like protein; P 67.0 42 0.00091 23.7 9.5 63 7-69 318-386 (480)
483 TIGR03606 non_repeat_PQQ dehyd 66.0 44 0.00096 23.6 6.8 56 7-62 368-430 (454)
484 PF08728 CRT10: CRT10; InterP 65.7 34 0.00074 25.7 5.9 61 6-66 175-245 (717)
485 KOG3522|consensus 65.6 16 0.00034 27.7 4.2 102 8-116 547-661 (925)
486 PF05694 SBP56: 56kDa selenium 65.4 45 0.00098 23.5 9.4 94 17-110 221-344 (461)
487 KOG2103|consensus 64.6 62 0.0013 24.8 7.0 78 38-120 36-115 (910)
488 TIGR02171 Fb_sc_TIGR02171 Fibr 63.1 53 0.0011 25.5 6.5 54 57-110 327-387 (912)
489 COG5308 NUP170 Nuclear pore co 63.1 51 0.0011 25.7 6.3 91 15-107 99-208 (1263)
490 PF11635 Med16: Mediator compl 62.6 66 0.0014 24.4 7.0 66 38-103 260-345 (753)
491 COG4880 Secreted protein conta 62.0 54 0.0012 23.2 8.1 91 19-109 407-504 (603)
492 KOG2727|consensus 60.6 24 0.00052 27.3 4.4 76 42-117 326-415 (1244)
493 PF10584 Proteasome_A_N: Prote 60.1 6.1 0.00013 15.1 0.9 9 2-10 6-14 (23)
494 PF05096 Glu_cyclase_2: Glutam 58.5 48 0.001 21.5 12.7 98 15-116 107-211 (264)
495 TIGR03032 conserved hypothetic 58.4 54 0.0012 22.1 11.8 78 48-129 212-310 (335)
496 cd06919 Asp_decarbox Aspartate 57.7 21 0.00045 19.8 2.9 20 99-118 40-59 (111)
497 PF14727 PHTB1_N: PTHB1 N-term 55.6 69 0.0015 22.4 12.8 104 6-109 35-164 (418)
498 TIGR02608 delta_60_rpt delta-6 54.9 23 0.00051 16.8 4.5 19 39-57 2-20 (55)
499 PRK05449 aspartate alpha-decar 54.2 25 0.00053 20.0 2.9 20 99-118 41-60 (126)
500 PLN00033 photosystem II stabil 53.6 73 0.0016 22.1 12.0 99 4-105 288-396 (398)
No 1
>KOG0271|consensus
Probab=99.96 E-value=1e-28 Score=154.27 Aligned_cols=124 Identities=26% Similarity=0.381 Sum_probs=114.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCccee-eeeecCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE-QQFSFHSA 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~-~~~~~~~~ 80 (131)
.|+|++..|++|+.|.++|+||+. ..+..+.++|...|.|++|+|||+.+++|+.||+|++||..+++.+ ..+.+|..
T Consensus 122 ~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K 201 (480)
T KOG0271|consen 122 QFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKK 201 (480)
T ss_pred EecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCccc
Confidence 589999999999999999999998 7788899999999999999999999999999999999999998765 67889999
Q ss_pred CeEEEEEcC-----CCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 81 PALDVDWQS-----NTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 81 ~v~~~~~~~-----~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
.|++++|.| +.+ +++++.||.++|||+..+.++..+.+|...++++
T Consensus 202 ~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCv 253 (480)
T KOG0271|consen 202 WITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCV 253 (480)
T ss_pred ceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEE
Confidence 999999976 334 8999999999999999999999999999998876
No 2
>KOG0272|consensus
Probab=99.96 E-value=3.7e-29 Score=157.30 Aligned_cols=123 Identities=23% Similarity=0.402 Sum_probs=115.4
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
+|+|+|++|++++.|.+-++||+. +..+....+|...|.+++|+|+|.++++|+.|..-++||+++++++..+.+|..+
T Consensus 268 afHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~ 347 (459)
T KOG0272|consen 268 AFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKE 347 (459)
T ss_pred eecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccc
Confidence 589999999999999999999998 6666777899999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
|.++.|+|+|. +++|+.|++++|||++..+++.++.+|.+.|..
T Consensus 348 I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~ 392 (459)
T KOG0272|consen 348 ILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQ 392 (459)
T ss_pred eeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhh
Confidence 99999999998 999999999999999999999999999876643
No 3
>KOG0272|consensus
Probab=99.95 E-value=5.2e-27 Score=147.71 Aligned_cols=123 Identities=22% Similarity=0.357 Sum_probs=116.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
+|.+||..+++|+-|..-++||+. ++.+..+.+|..+|..|+|+|+|-.+++|+.|+++++||++....+..+..|...
T Consensus 310 af~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nl 389 (459)
T KOG0272|consen 310 AFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNL 389 (459)
T ss_pred EecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccch
Confidence 589999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCC-Cc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 82 ALDVDWQSN-TS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 82 v~~~~~~~~-~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
|+.++|+|+ |. |++++.|++++||..++++++.++.+|.+.|.+
T Consensus 390 VS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s 435 (459)
T KOG0272|consen 390 VSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVIS 435 (459)
T ss_pred hhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEE
Confidence 999999995 66 899999999999999999999999999887644
No 4
>KOG0266|consensus
Probab=99.94 E-value=8.3e-26 Score=149.69 Aligned_cols=120 Identities=28% Similarity=0.448 Sum_probs=110.8
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (131)
.|+|+++++++++.|++|++||+. +..++++.+|...|.+++|+|+++.+++|+.|++|++||++++++...+..|..
T Consensus 210 ~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~ 289 (456)
T KOG0266|consen 210 AFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSD 289 (456)
T ss_pred EECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCC
Confidence 589999999999999999999994 578899999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCe--eeEEEecccce
Q psy3840 81 PALDVDWQSNTS-FASCSTDQHIHVCKLHSDK--PVKSFEGHTRV 122 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~ 122 (131)
.+.+++|++++. +++++.|+.|++||+.++. ++..+..+...
T Consensus 290 ~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~ 334 (456)
T KOG0266|consen 290 GISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENS 334 (456)
T ss_pred ceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCC
Confidence 999999999987 8888889999999999998 56677666655
No 5
>KOG0279|consensus
Probab=99.94 E-value=7.2e-26 Score=136.39 Aligned_cols=127 Identities=23% Similarity=0.291 Sum_probs=112.9
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccc--cccEEEEEEcCC--CCEEEEEeCCCcEEEEECCCcceeeeeecC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQH--KGPIFALKWNKR--GNYILSAGVDKTTIIWDAASGQCEQQFSFH 78 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~--~~~i~~~~~~~~--~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 78 (131)
++++|+..+++|+.|.+|.+||+.+.+..+...+ .+.|.|+.|+|+ ...+++++.|+++++||+++-+....+.+|
T Consensus 112 a~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh 191 (315)
T KOG0279|consen 112 AFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGH 191 (315)
T ss_pred EecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccc
Confidence 5899999999999999999999988777666554 789999999996 789999999999999999999999999999
Q ss_pred CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEEeee
Q psy3840 79 SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLAMDL 129 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 129 (131)
.+.++.+.++|||. .++|+.||.+.+||++.++.+.++.+.......+|++
T Consensus 192 ~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~fsp 243 (315)
T KOG0279|consen 192 SGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSP 243 (315)
T ss_pred cccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeEeeEEecC
Confidence 99999999999988 7899999999999999999998887666555555543
No 6
>KOG0271|consensus
Probab=99.94 E-value=1.6e-26 Score=144.56 Aligned_cols=124 Identities=28% Similarity=0.438 Sum_probs=113.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcC-----CCCEEEEEeCCCcEEEEECCCcceeeee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNK-----RGNYILSAGVDKTTIIWDAASGQCEQQF 75 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~-----~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 75 (131)
+|+|||..||+|+.||+|++||.+ +..-..+.+|...|++++|.| ..+++++++.||.++|||+..+.++..+
T Consensus 164 awsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l 243 (480)
T KOG0271|consen 164 AWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL 243 (480)
T ss_pred EECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe
Confidence 589999999999999999999976 444567899999999999976 5678999999999999999999999999
Q ss_pred ecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 76 SFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
.+|..+|+|++|-.++.+++++.|++|++|+...|.+.+.+++|..-++.+
T Consensus 244 sgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~l 294 (480)
T KOG0271|consen 244 SGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHL 294 (480)
T ss_pred ccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeee
Confidence 999999999999989999999999999999999999999999998876543
No 7
>KOG0263|consensus
Probab=99.94 E-value=2e-26 Score=153.55 Aligned_cols=124 Identities=25% Similarity=0.452 Sum_probs=116.7
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.|+|.|-++|+++.|++.++|... ..+.+.+.+|...+.|+.|+|+..++++|+.|.++++||..+|..++.+.+|..+
T Consensus 500 ~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~ 579 (707)
T KOG0263|consen 500 QFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGP 579 (707)
T ss_pred EecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCc
Confidence 478999999999999999999987 7788889999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
|.+++|+|+|+ |++|+.|+.|.+||+.++..+..+.+|.+.++++
T Consensus 580 V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~Sl 625 (707)
T KOG0263|consen 580 VTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSL 625 (707)
T ss_pred eEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEE
Confidence 99999999998 8999999999999999999999999997766543
No 8
>KOG0286|consensus
Probab=99.94 E-value=1.1e-25 Score=136.41 Aligned_cols=124 Identities=27% Similarity=0.492 Sum_probs=113.4
Q ss_pred CCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEE
Q psy3840 7 NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALD 84 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~ 84 (131)
+...|++++.|.+.-+||++ ++.+..+.+|.+.|.++.++| +++.+++|+-|+..++||++.+.+++.|.+|...|++
T Consensus 155 dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINs 234 (343)
T KOG0286|consen 155 DDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINS 234 (343)
T ss_pred CCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccce
Confidence 36778888999999999998 888999999999999999999 9999999999999999999999999999999999999
Q ss_pred EEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEEeeecC
Q psy3840 85 VDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLAMDLLF 131 (131)
Q Consensus 85 ~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~f 131 (131)
++|.|+|. +++|++|++.++||+|..+.+..++ |...+..+.++.|
T Consensus 235 v~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys-~~~~~~gitSv~F 281 (343)
T KOG0286|consen 235 VRFFPSGDAFATGSDDATCRLYDLRADQELAVYS-HDSIICGITSVAF 281 (343)
T ss_pred EEEccCCCeeeecCCCceeEEEeecCCcEEeeec-cCcccCCceeEEE
Confidence 99999987 9999999999999999999999988 5556666666554
No 9
>PTZ00421 coronin; Provisional
Probab=99.93 E-value=2.2e-24 Score=143.42 Aligned_cols=120 Identities=22% Similarity=0.335 Sum_probs=107.3
Q ss_pred cccC-CCCEEEEEeCCCeEEEEcCCC--------CceeecccccccEEEEEEcCCC-CEEEEEeCCCcEEEEECCCccee
Q psy3840 3 SSRN-NGSFLATGSYDGYARIWTSDG--------SLKSTLGQHKGPIFALKWNKRG-NYILSAGVDKTTIIWDAASGQCE 72 (131)
Q Consensus 3 ~~~~-~~~~l~~~~~d~~i~~~~~~~--------~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~ 72 (131)
.|+| ++++|++|+.|++|++||+.. ..+..+.+|...|.+++|+|++ .++++++.|+.|++||+++++.+
T Consensus 82 ~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~ 161 (493)
T PTZ00421 82 AFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAV 161 (493)
T ss_pred EEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEE
Confidence 4777 789999999999999999862 3466788999999999999975 79999999999999999999988
Q ss_pred eeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccce
Q psy3840 73 QQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRV 122 (131)
Q Consensus 73 ~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 122 (131)
..+..|...|.+++|+|++. +++++.|+.|++||+++++.+.++.+|...
T Consensus 162 ~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~ 212 (493)
T PTZ00421 162 EVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASA 212 (493)
T ss_pred EEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCC
Confidence 88888889999999999987 899999999999999999998888888653
No 10
>KOG0279|consensus
Probab=99.93 E-value=1.9e-24 Score=130.32 Aligned_cols=122 Identities=20% Similarity=0.331 Sum_probs=107.0
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC--CC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH--SA 80 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~--~~ 80 (131)
.++++++.++++.|+++++||+. ++....+.+|...|.+++|+|+.+++++|+.|.+|++|+..... ..++... +.
T Consensus 71 ~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~c-k~t~~~~~~~~ 149 (315)
T KOG0279|consen 71 LSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVC-KYTIHEDSHRE 149 (315)
T ss_pred EccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccE-EEEEecCCCcC
Confidence 57899999999999999999988 68889999999999999999999999999999999999976543 3444433 67
Q ss_pred CeEEEEEcCCC--c-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 81 PALDVDWQSNT--S-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 81 ~v~~~~~~~~~--~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
-|.++.|+|+. - +++++.|+.+++||+++.+....+.+|.+.++.+
T Consensus 150 WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~ 198 (315)
T KOG0279|consen 150 WVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTV 198 (315)
T ss_pred cEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEE
Confidence 79999999973 2 8999999999999999999999999998877544
No 11
>KOG0284|consensus
Probab=99.93 E-value=1.5e-25 Score=140.88 Aligned_cols=124 Identities=24% Similarity=0.366 Sum_probs=115.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
+|+|+...+++++.||+|+|||.. .+....+.+|...+.+++|+|.-.+++++++|..|++||.+++.++.++..|+..
T Consensus 187 afSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKnt 266 (464)
T KOG0284|consen 187 AFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNT 266 (464)
T ss_pred ccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccce
Confidence 689999999999999999999976 6677778999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
|..+.|++++. |++++.|..++++|+++.+.+..+++|...+..+
T Consensus 267 Vl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~ 312 (464)
T KOG0284|consen 267 VLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSL 312 (464)
T ss_pred EEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheee
Confidence 99999999977 8999999999999999999999999888776554
No 12
>KOG0263|consensus
Probab=99.92 E-value=1.2e-24 Score=145.13 Aligned_cols=124 Identities=23% Similarity=0.390 Sum_probs=116.5
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.|+|+.++|++++.|+++|+|.+. ...+..+++|..||+.+.|+|-|-++++++.|++.++|......+++.+.+|...
T Consensus 458 sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsD 537 (707)
T KOG0263|consen 458 SFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSD 537 (707)
T ss_pred eecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccc
Confidence 589999999999999999999987 6677788899999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
|.|+.|+|+.. +++|+.|.++++||..+|..++.+.+|..++..+
T Consensus 538 V~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al 583 (707)
T KOG0263|consen 538 VDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTAL 583 (707)
T ss_pred cceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEE
Confidence 99999999976 8999999999999999999999999999887543
No 13
>KOG0285|consensus
Probab=99.92 E-value=3.5e-24 Score=133.27 Aligned_cols=126 Identities=26% Similarity=0.384 Sum_probs=117.7
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
++.|.++++++|+.|+++.|||+. |+...++.+|...+..+++++...++++++.|+.++.||+...+.++.+.+|-..
T Consensus 158 avdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~ 237 (460)
T KOG0285|consen 158 AVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSG 237 (460)
T ss_pred eeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccce
Confidence 357889999999999999999987 7888889999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCC-cEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEEee
Q psy3840 82 ALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLAMD 128 (131)
Q Consensus 82 v~~~~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 128 (131)
|.+++.+|.- .+++++.|..+++||+|+...+..+.+|...+..++.
T Consensus 238 V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~ 285 (460)
T KOG0285|consen 238 VYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMC 285 (460)
T ss_pred eEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEe
Confidence 9999999974 5999999999999999999999999999998877654
No 14
>KOG0319|consensus
Probab=99.92 E-value=2.8e-24 Score=143.03 Aligned_cols=124 Identities=22% Similarity=0.397 Sum_probs=116.5
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
+++|+..++++|+.|.+.++|+++ .....++.+|...++++.|+|..+.+++++.|.++++|.+.+..++.++.+|...
T Consensus 470 aia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~a 549 (775)
T KOG0319|consen 470 AIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSA 549 (775)
T ss_pred EecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccce
Confidence 468999999999999999999987 6778899999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
|....|-.++. +++++.||.+++|++++++|+.++..|...+...
T Consensus 550 Vlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL 595 (775)
T KOG0319|consen 550 VLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWAL 595 (775)
T ss_pred eEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEE
Confidence 99999988766 9999999999999999999999999998877554
No 15
>KOG0266|consensus
Probab=99.92 E-value=3.3e-23 Score=137.45 Aligned_cols=124 Identities=26% Similarity=0.402 Sum_probs=113.0
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CC--ceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEEC-CCcceeeeeecC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GS--LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA-ASGQCEQQFSFH 78 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~--~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~-~~~~~~~~~~~~ 78 (131)
.|+++|+.+++++.++.+++|+.. .+ ....+.+|...|..++|+|+++++++++.|+++++||+ ..+..++++.+|
T Consensus 166 ~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH 245 (456)
T KOG0266|consen 166 DFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGH 245 (456)
T ss_pred EEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCC
Confidence 478999999999999999999985 44 56667889999999999999999999999999999999 456888999999
Q ss_pred CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 79 SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
...+++++|+|+++ +++|+.|++|++||+++++++..+.+|...+..+
T Consensus 246 ~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~ 294 (456)
T KOG0266|consen 246 STYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGL 294 (456)
T ss_pred CCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEE
Confidence 99999999999986 8999999999999999999999999999877644
No 16
>KOG0284|consensus
Probab=99.92 E-value=1.3e-24 Score=136.72 Aligned_cols=123 Identities=21% Similarity=0.345 Sum_probs=112.2
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeeccccc-ccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHK-GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.|++++.++++|+.+|.|++|+.+...+..++.|. ..|++++|+|+...+++++.||+|+|||....+.-..+.+|.-.
T Consensus 145 ~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwd 224 (464)
T KOG0284|consen 145 KWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWD 224 (464)
T ss_pred EEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCC
Confidence 37889999999999999999999877777777766 89999999999999999999999999999998888888999999
Q ss_pred eEEEEEcCC-CcEEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 82 ALDVDWQSN-TSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 82 v~~~~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
|.+++|+|. +.+++++.|..|++||.+++.++.++..|...+..
T Consensus 225 VksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~ 269 (464)
T KOG0284|consen 225 VKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLA 269 (464)
T ss_pred cceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEE
Confidence 999999998 55899999999999999999999999988876643
No 17
>KOG0286|consensus
Probab=99.91 E-value=3.3e-23 Score=125.83 Aligned_cols=123 Identities=24% Similarity=0.408 Sum_probs=112.0
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCC-------CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDG-------SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 75 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 75 (131)
+|+|+++++|+|+-|+...+|+++. +..+.+.+|++.+.|+.|-+ ...+++++.|.++.+||+++++.+..+
T Consensus 104 A~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f 182 (343)
T KOG0286|consen 104 AYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVF 182 (343)
T ss_pred EECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEe
Confidence 5899999999999999999999871 34567889999999999987 667899999999999999999999999
Q ss_pred ecCCCCeEEEEEcC-CCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 76 SFHSAPALDVDWQS-NTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 76 ~~~~~~v~~~~~~~-~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
.+|.+.|.+++++| +++ +++|+.|+..++||+|.+.+.+++.+|...++.+
T Consensus 183 ~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv 235 (343)
T KOG0286|consen 183 HGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSV 235 (343)
T ss_pred cCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceE
Confidence 99999999999999 555 9999999999999999999999999999887654
No 18
>PTZ00420 coronin; Provisional
Probab=99.91 E-value=2e-22 Score=135.34 Aligned_cols=119 Identities=23% Similarity=0.379 Sum_probs=101.4
Q ss_pred cccCC-CCEEEEEeCCCeEEEEcCC-CC--------ceeecccccccEEEEEEcCCCCE-EEEEeCCCcEEEEECCCcce
Q psy3840 3 SSRNN-GSFLATGSYDGYARIWTSD-GS--------LKSTLGQHKGPIFALKWNKRGNY-ILSAGVDKTTIIWDAASGQC 71 (131)
Q Consensus 3 ~~~~~-~~~l~~~~~d~~i~~~~~~-~~--------~~~~~~~~~~~i~~~~~~~~~~~-~~s~~~d~~i~~~d~~~~~~ 71 (131)
+|+|+ +++|++|+.|++|++||+. +. ++..+.+|...|.+++|+|++.. +++++.|+.+++||+++++.
T Consensus 81 afsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~ 160 (568)
T PTZ00420 81 QFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKR 160 (568)
T ss_pred EEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 46775 7899999999999999986 21 23456789999999999998875 57899999999999999887
Q ss_pred eeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccce
Q psy3840 72 EQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRV 122 (131)
Q Consensus 72 ~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 122 (131)
+..+. +...+.+++|+|++. +++++.|+.|++||+++++.+.++.+|.+.
T Consensus 161 ~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~ 211 (568)
T PTZ00420 161 AFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGG 211 (568)
T ss_pred EEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCC
Confidence 76665 457899999999987 777888999999999999999999888764
No 19
>KOG0273|consensus
Probab=99.90 E-value=8e-23 Score=130.62 Aligned_cols=124 Identities=48% Similarity=0.845 Sum_probs=110.0
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc------------
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ------------ 70 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~------------ 70 (131)
+|+.+|..|++|+.||.+++|+..|..+.++..|.+||.+++|+.+|.++++++.|+++.+||..++.
T Consensus 242 ~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~ 321 (524)
T KOG0273|consen 242 DWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPA 321 (524)
T ss_pred EecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCc
Confidence 58899999999999999999999999999999999999999999999999999999999999996653
Q ss_pred -----------------------------eeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEeccc
Q psy3840 71 -----------------------------CEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHT 120 (131)
Q Consensus 71 -----------------------------~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~ 120 (131)
++.++.+|.++|.++.|+|.+. |++++.|++++||+.........+..|.
T Consensus 322 lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hs 401 (524)
T KOG0273|consen 322 LDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHS 401 (524)
T ss_pred cceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhc
Confidence 2233457889999999999988 8999999999999988888888888887
Q ss_pred ceEEEE
Q psy3840 121 RVYYLA 126 (131)
Q Consensus 121 ~~~~~~ 126 (131)
..++.+
T Consensus 402 kei~t~ 407 (524)
T KOG0273|consen 402 KEIYTI 407 (524)
T ss_pred cceeeE
Confidence 665544
No 20
>KOG0285|consensus
Probab=99.90 E-value=1.7e-22 Score=125.87 Aligned_cols=122 Identities=16% Similarity=0.310 Sum_probs=112.5
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
++|+-..++++++.|+.|+.||+. .+.++.+.+|-..|.+++.+|.-..+++++.|.++++||+++...+..+.+|..+
T Consensus 200 avS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~ 279 (460)
T KOG0285|consen 200 AVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNP 279 (460)
T ss_pred eecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCc
Confidence 467788999999999999999998 7788899999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcC-CCcEEEEeCCCcEEEEeCCCCeeeEEEecccceEE
Q psy3840 82 ALDVDWQS-NTSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYY 124 (131)
Q Consensus 82 v~~~~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 124 (131)
|.++.+.| +.++++|+.|++|++||++.++...++..|...+.
T Consensus 280 V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvr 323 (460)
T KOG0285|consen 280 VASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVR 323 (460)
T ss_pred ceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceee
Confidence 99999987 57799999999999999999998888887776553
No 21
>KOG0273|consensus
Probab=99.90 E-value=2.7e-22 Score=128.20 Aligned_cols=121 Identities=31% Similarity=0.516 Sum_probs=110.1
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCC---------CEEEEEeCCCcEEEEECCCccee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRG---------NYILSAGVDKTTIIWDAASGQCE 72 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~---------~~~~s~~~d~~i~~~d~~~~~~~ 72 (131)
.|+|.+.+|++++.|+++++|+.. ......+..|...|..+.|+|.+ ..+++++.|+++++||+..+.++
T Consensus 366 k~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i 445 (524)
T KOG0273|consen 366 KWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPI 445 (524)
T ss_pred EECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCcee
Confidence 378999999999999999999965 77888899999999999999854 36899999999999999999999
Q ss_pred eeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceE
Q psy3840 73 QQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVY 123 (131)
Q Consensus 73 ~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 123 (131)
..+..|..+|++++|+|+++ +++|+.|+.|.+|++++++.++.+.+.....
T Consensus 446 ~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~If 497 (524)
T KOG0273|consen 446 HTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIF 497 (524)
T ss_pred EeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCCCeEE
Confidence 99999999999999999988 8999999999999999999999988766533
No 22
>KOG0295|consensus
Probab=99.90 E-value=2.1e-22 Score=125.24 Aligned_cols=122 Identities=25% Similarity=0.457 Sum_probs=110.0
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCC---------------CCEEEEEeCCCcEEEEECC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKR---------------GNYILSAGVDKTTIIWDAA 67 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~---------------~~~~~s~~~d~~i~~~d~~ 67 (131)
.+.||.++++++.|.++++|-+. +.+...+..|+-++.+++|.|. ++.+.+++.|++|++||+.
T Consensus 243 v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~ 322 (406)
T KOG0295|consen 243 VNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVS 322 (406)
T ss_pred ecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEecc
Confidence 46789999999999999999987 6677788899999999999763 2478899999999999999
Q ss_pred CcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 68 SGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 68 ~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
++.++.++.+|..-|..++|+|.|+ |+++.+|+++++||+++++++.++..|+..++.
T Consensus 323 tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~ 381 (406)
T KOG0295|consen 323 TGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTS 381 (406)
T ss_pred CCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEE
Confidence 9999999999999999999999999 899999999999999999999999988876543
No 23
>KOG0316|consensus
Probab=99.89 E-value=2.3e-22 Score=119.32 Aligned_cols=114 Identities=24% Similarity=0.413 Sum_probs=105.6
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
|+-+|++.++++.|.+|++||.. +..++++.+|...|..++.+.+...+++++.|..+.+||+.+|+..+.+.+|...|
T Consensus 25 yN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqV 104 (307)
T KOG0316|consen 25 YNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQV 104 (307)
T ss_pred EccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeeccccccee
Confidence 67899999999999999999965 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCc-EEEEeCCCcEEEEeCCCC--eeeEEEe
Q psy3840 83 LDVDWQSNTS-FASCSTDQHIHVCKLHSD--KPVKSFE 117 (131)
Q Consensus 83 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~~--~~~~~~~ 117 (131)
+.++|+.+.. +++|+-|..+++||.|+. ++++.+.
T Consensus 105 NtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQild 142 (307)
T KOG0316|consen 105 NTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILD 142 (307)
T ss_pred eEEEecCcceEEEeccccceeEEEEcccCCCCccchhh
Confidence 9999998866 899999999999999864 6666654
No 24
>KOG0275|consensus
Probab=99.89 E-value=7.8e-24 Score=130.88 Aligned_cols=124 Identities=24% Similarity=0.500 Sum_probs=110.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceee--------cccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKST--------LGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ 73 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~--------~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~ 73 (131)
-|+|||+++++|+.||.|.+||.. |+.... +--++.+|.|+.|+.+...+++|+.||.|++|.+++|.+++
T Consensus 220 ~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClR 299 (508)
T KOG0275|consen 220 RFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLR 299 (508)
T ss_pred eeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHH
Confidence 489999999999999999999975 544332 22367899999999999999999999999999999999999
Q ss_pred eee-cCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 74 QFS-FHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 74 ~~~-~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
.+. .|...|+++.|+.|+. +++++.|..+++.-+++|+++..+.+|...++-+
T Consensus 300 rFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a 354 (508)
T KOG0275|consen 300 RFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEA 354 (508)
T ss_pred HhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccce
Confidence 987 7889999999999865 9999999999999999999999999998877543
No 25
>KOG0292|consensus
Probab=99.89 E-value=2.5e-22 Score=136.69 Aligned_cols=124 Identities=21% Similarity=0.356 Sum_probs=117.8
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
+|+|....++++-.+|.|++||.. +..+..+..|+++|+.++|+|++..++||+.|-.|++|+..+.+++.++.+|-+-
T Consensus 16 sFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDY 95 (1202)
T KOG0292|consen 16 SFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDY 95 (1202)
T ss_pred ecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccce
Confidence 689999999999999999999998 8889999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
|..+.|+++-- ++++++|.+|+||+..+..++..+.+|...+.++
T Consensus 96 VRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcA 141 (1202)
T KOG0292|consen 96 VRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCA 141 (1202)
T ss_pred eEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEee
Confidence 99999999865 8999999999999999999999999999887554
No 26
>KOG0282|consensus
Probab=99.89 E-value=2.4e-23 Score=133.16 Aligned_cols=124 Identities=23% Similarity=0.425 Sum_probs=111.1
Q ss_pred ccccCCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCC
Q psy3840 2 QSSRNNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 2 ~~~~~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
++|...+.+|++++.|+.|+||++. +++++++.+|..+|..++|+++|..+++++.|+.+++||.++|+++..+.. .
T Consensus 221 ~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~-~ 299 (503)
T KOG0282|consen 221 QWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHL-D 299 (503)
T ss_pred hhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEec-C
Confidence 4556689999999999999999975 889999999999999999999999999999999999999999999988875 4
Q ss_pred CCeEEEEEcCCC-c-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 80 APALDVDWQSNT-S-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 80 ~~v~~~~~~~~~-~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
..+.++.|+|++ . +++|+.|+.|+.||+|+++.++++..|-+.+..+
T Consensus 300 ~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i 348 (503)
T KOG0282|consen 300 KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDI 348 (503)
T ss_pred CCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeee
Confidence 578999999986 3 8999999999999999999998888777665443
No 27
>KOG0291|consensus
Probab=99.89 E-value=1.1e-21 Score=131.52 Aligned_cols=123 Identities=22% Similarity=0.362 Sum_probs=110.2
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCC-C
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-A 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~ 80 (131)
+++|||+++++|+.||.|++||.. +-+..++..|+..++.+.|+..++.+++.+-||+++.||+...+..+++.... .
T Consensus 357 ~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~ 436 (893)
T KOG0291|consen 357 AYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPI 436 (893)
T ss_pred EECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCce
Confidence 589999999999999999999987 88999999999999999999999999999999999999999999988887643 3
Q ss_pred CeEEEEEcCCCcE-EEEeCCC-cEEEEeCCCCeeeEEEecccceEEE
Q psy3840 81 PALDVDWQSNTSF-ASCSTDQ-HIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 81 ~v~~~~~~~~~~~-~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
...+++..|.|.+ .+|+.|. .|.+|++++|+.+..+++|.+++..
T Consensus 437 QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~ 483 (893)
T KOG0291|consen 437 QFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSG 483 (893)
T ss_pred eeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCccee
Confidence 5678888998885 4555565 6999999999999999999999875
No 28
>KOG0265|consensus
Probab=99.88 E-value=2e-21 Score=118.43 Aligned_cols=115 Identities=27% Similarity=0.398 Sum_probs=100.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCC--ceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGS--LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (131)
.|+|+|..+++|+.|..|.+|++.+. -...+++|.+.|..+.|.++++.+++++.|.+++.||.++|+..+.++.|..
T Consensus 54 ~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~ 133 (338)
T KOG0265|consen 54 KFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTS 133 (338)
T ss_pred EECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccc
Confidence 48999999999999999999998743 4567789999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEcCCCc--EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 81 PALDVDWQSNTS--FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 81 ~v~~~~~~~~~~--~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
-++++.-..-|. +.+++.|+++++||+|+.+++.++.
T Consensus 134 ~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~ 172 (338)
T KOG0265|consen 134 FVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE 172 (338)
T ss_pred eeeecCccccCCeEEEecCCCceEEEEeecccchhhccc
Confidence 998887333343 5788899999999999877766653
No 29
>KOG0276|consensus
Probab=99.87 E-value=9.8e-22 Score=129.64 Aligned_cols=124 Identities=21% Similarity=0.291 Sum_probs=114.0
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeecCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (131)
.+|...+++++++|-+|++||-+ -.+.+++.+|+..|.+++|.| |.+.+++++-|+++++|.+....+..++.+|..
T Consensus 105 vHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHek 184 (794)
T KOG0276|consen 105 VHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEK 184 (794)
T ss_pred ecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeecccc
Confidence 57889999999999999999976 456788999999999999999 788999999999999999999999999999999
Q ss_pred CeEEEEEcCCC---cEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEEe
Q psy3840 81 PALDVDWQSNT---SFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLAM 127 (131)
Q Consensus 81 ~v~~~~~~~~~---~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 127 (131)
.|+++.|-+.+ .+++|++|..++|||..+..|++++.+|.+.+..++
T Consensus 185 GVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~ 234 (794)
T KOG0276|consen 185 GVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVF 234 (794)
T ss_pred CcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEE
Confidence 99999998865 489999999999999999999999999999887654
No 30
>KOG0647|consensus
Probab=99.87 E-value=6e-21 Score=116.52 Aligned_cols=117 Identities=31% Similarity=0.602 Sum_probs=98.4
Q ss_pred cccC-CCCEEEEEeCCCeEEEEcCC--CCce-eecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC
Q psy3840 3 SSRN-NGSFLATGSYDGYARIWTSD--GSLK-STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH 78 (131)
Q Consensus 3 ~~~~-~~~~l~~~~~d~~i~~~~~~--~~~~-~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 78 (131)
+||| ...++++++.|++||+|+++ |..+ .....|++++.+++|+.+|..+++|+.|+.+++||+.+++ +..+..|
T Consensus 34 ~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q-~~~v~~H 112 (347)
T KOG0647|consen 34 AFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ-VSQVAAH 112 (347)
T ss_pred EeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC-eeeeeec
Confidence 5788 55666788899999999987 2333 3445789999999999999999999999999999999995 4566778
Q ss_pred CCCeEEEEEcCC-C-c-EEEEeCCCcEEEEeCCCCeeeEEEeccc
Q psy3840 79 SAPALDVDWQSN-T-S-FASCSTDQHIHVCKLHSDKPVKSFEGHT 120 (131)
Q Consensus 79 ~~~v~~~~~~~~-~-~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~ 120 (131)
..+|..+.|-+. . . |++|+.|.+|+.||+|...++.+++..+
T Consensus 113 d~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe 157 (347)
T KOG0647|consen 113 DAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE 157 (347)
T ss_pred ccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccc
Confidence 999999999775 2 2 8999999999999999988888876544
No 31
>KOG0319|consensus
Probab=99.87 E-value=3.1e-21 Score=128.76 Aligned_cols=119 Identities=25% Similarity=0.352 Sum_probs=106.3
Q ss_pred CCEEEEEeCCCeEEEEcCCC------Cce----eecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeec
Q psy3840 8 GSFLATGSYDGYARIWTSDG------SLK----STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF 77 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~~------~~~----~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 77 (131)
..++++++.|.++++|++.. ... .+...|+..|.+++++|+.+++++|+.|.+.++|+++.......+.+
T Consensus 424 asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsG 503 (775)
T KOG0319|consen 424 ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSG 503 (775)
T ss_pred ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeC
Confidence 46899999999999999863 111 13356999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 78 HSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 78 ~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
|+..++++.|+|..+ +++++.|.+|+||.+.+..++.++++|...+-.+
T Consensus 504 H~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra 553 (775)
T KOG0319|consen 504 HTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRA 553 (775)
T ss_pred CccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEee
Confidence 999999999999877 8999999999999999999999999999877543
No 32
>KOG0315|consensus
Probab=99.87 E-value=1.7e-20 Score=112.20 Aligned_cols=122 Identities=20% Similarity=0.343 Sum_probs=108.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-------CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc-ceeeee
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-------GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG-QCEQQF 75 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~-~~~~~~ 75 (131)
..|||.+++++.+.|+..+|++- -.++..++.|++.+..+.++|+++++++++.|.++++|+..+. +....+
T Consensus 175 v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l 254 (311)
T KOG0315|consen 175 VMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVL 254 (311)
T ss_pred EcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEe
Confidence 57899999999999999999975 2456778889999999999999999999999999999999887 555667
Q ss_pred ecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 76 SFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
.+|..-++..+|+.|++ |++++.|+.+++|+++.++.++.+.+|-+...+
T Consensus 255 ~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc 305 (311)
T KOG0315|consen 255 TGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVC 305 (311)
T ss_pred ecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEE
Confidence 78888899999999988 899999999999999999999999998765443
No 33
>KOG0277|consensus
Probab=99.87 E-value=1.1e-20 Score=113.20 Aligned_cols=120 Identities=22% Similarity=0.356 Sum_probs=103.5
Q ss_pred ccC-CCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeecCC
Q psy3840 4 SRN-NGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 4 ~~~-~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
|++ ..+.+++++.||++++||.. .+++..++.|...|.++.|++ ....+++++.|++|++|+...++.+.++.+|.
T Consensus 68 Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~ 147 (311)
T KOG0277|consen 68 WSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHN 147 (311)
T ss_pred ecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCc
Confidence 444 45678888899999999975 678899999999999999999 66778888999999999999999999999999
Q ss_pred CCeEEEEEcCC--CcEEEEeCCCcEEEEeCCCCeeeEEEecccceE
Q psy3840 80 APALDVDWQSN--TSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVY 123 (131)
Q Consensus 80 ~~v~~~~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 123 (131)
..|....|+|. +.+++++.|+.+++||++.......+..|...+
T Consensus 148 ~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Ei 193 (311)
T KOG0277|consen 148 SCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEI 193 (311)
T ss_pred cEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEecccee
Confidence 99999999996 348999999999999998765555588887443
No 34
>KOG0275|consensus
Probab=99.87 E-value=1.5e-22 Score=125.25 Aligned_cols=117 Identities=25% Similarity=0.413 Sum_probs=109.8
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecc-cccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLG-QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~-~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (131)
.|+.|.+.+++|+.||.|++|.+. |.+++.+. .|+..|+|+.|+.++..+++++.|.++++.-+.+|+++..+.+|..
T Consensus 270 ~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsS 349 (508)
T KOG0275|consen 270 SFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSS 349 (508)
T ss_pred eecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccc
Confidence 478999999999999999999987 88888886 7999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecc
Q psy3840 81 PALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
-|+...|.++|. +++++.||+|++|+.++.+|+.+++..
T Consensus 350 yvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~ 389 (508)
T KOG0275|consen 350 YVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPL 389 (508)
T ss_pred cccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCC
Confidence 999999999987 999999999999999999999888653
No 35
>KOG0645|consensus
Probab=99.86 E-value=5.8e-20 Score=110.83 Aligned_cols=124 Identities=25% Similarity=0.501 Sum_probs=105.4
Q ss_pred cccCC-CCEEEEEeCCCeEEEEcCCC-Cc---eeec-ccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC--cceeee
Q psy3840 3 SSRNN-GSFLATGSYDGYARIWTSDG-SL---KSTL-GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS--GQCEQQ 74 (131)
Q Consensus 3 ~~~~~-~~~l~~~~~d~~i~~~~~~~-~~---~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~--~~~~~~ 74 (131)
+|+|- |..||+++.|..|++|+..+ .. ...+ .+|...|++++|+|.|+++++++.|.++.+|.-.. .+++..
T Consensus 21 awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~ 100 (312)
T KOG0645|consen 21 AWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVAT 100 (312)
T ss_pred EeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEee
Confidence 57776 78999999999999999873 22 2222 46889999999999999999999999999998654 477889
Q ss_pred eecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCC---eeeEEEecccceEEEE
Q psy3840 75 FSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSD---KPVKSFEGHTRVYYLA 126 (131)
Q Consensus 75 ~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~~ 126 (131)
+.+|..+|-+++|+++|. |++++.|..|.||....+ +++..+++|.+.+..+
T Consensus 101 lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V 156 (312)
T KOG0645|consen 101 LEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHV 156 (312)
T ss_pred eeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEE
Confidence 999999999999999987 899999999999998754 6788888898877554
No 36
>KOG0315|consensus
Probab=99.86 E-value=1.2e-20 Score=112.87 Aligned_cols=110 Identities=20% Similarity=0.323 Sum_probs=95.0
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC---CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD---GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
...|++..|++++. ..||+||++ ..++.++.+|+..|..+.|..+|+++++|+.||++++||++...+.+.+. +.
T Consensus 47 eiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~ 124 (311)
T KOG0315|consen 47 EITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HN 124 (311)
T ss_pred EEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CC
Confidence 35789999999874 579999997 34788999999999999999999999999999999999999966655555 56
Q ss_pred CCeEEEEEcCCC-cEEEEeCCCcEEEEeCCCCeeeE
Q psy3840 80 APALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVK 114 (131)
Q Consensus 80 ~~v~~~~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~ 114 (131)
.+|+++..+|+. .|++|..+|.|++||+++..+..
T Consensus 125 spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~ 160 (311)
T KOG0315|consen 125 SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTH 160 (311)
T ss_pred CCcceEEecCCcceEEeecCCCcEEEEEccCCcccc
Confidence 899999999984 59999999999999998764433
No 37
>KOG0277|consensus
Probab=99.86 E-value=5.1e-20 Score=110.38 Aligned_cols=121 Identities=21% Similarity=0.322 Sum_probs=102.6
Q ss_pred CCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeE
Q psy3840 6 NNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 83 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~ 83 (131)
.+++.+++++-|++|++|+.. .+.+.++.+|...|...+|+| .++.+++++.|+.+++||++..-....+..|..++.
T Consensus 115 ~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil 194 (311)
T KOG0277|consen 115 VRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEIL 194 (311)
T ss_pred ccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeE
Confidence 356778888999999999987 788899999999999999999 889999999999999999987444444888888999
Q ss_pred EEEEcCCC--cEEEEeCCCcEEEEeCCCC-eeeEEEecccceEEEE
Q psy3840 84 DVDWQSNT--SFASCSTDQHIHVCKLHSD-KPVKSFEGHTRVYYLA 126 (131)
Q Consensus 84 ~~~~~~~~--~~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~ 126 (131)
++.|+.-. .+++|+.|+.|+.||++.. .++..+.+|.-.+..+
T Consensus 195 ~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkv 240 (311)
T KOG0277|consen 195 CCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKV 240 (311)
T ss_pred eecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEE
Confidence 99998643 3899999999999999975 5677778887666544
No 38
>KOG0318|consensus
Probab=99.85 E-value=1.2e-19 Score=117.64 Aligned_cols=120 Identities=29% Similarity=0.398 Sum_probs=101.3
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecc---cccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeee-----
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLG---QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ----- 74 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~---~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~----- 74 (131)
|+|||+++++.+.||++.+||-. ++.+..+. .|.+.|..+.|+||++.+++++.|.++++||+.+.+++++
T Consensus 198 ysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~ 277 (603)
T KOG0318|consen 198 YSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGS 277 (603)
T ss_pred ECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCC
Confidence 79999999999999999999966 77777776 7999999999999999999999999999999987654333
Q ss_pred --------------------------------------eecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEE
Q psy3840 75 --------------------------------------FSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKS 115 (131)
Q Consensus 75 --------------------------------------~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~ 115 (131)
+.+|...|+++..+|++. +++|+.||.|.-||..++..-+.
T Consensus 278 ~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~ 357 (603)
T KOG0318|consen 278 TVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRL 357 (603)
T ss_pred chhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCcccccc
Confidence 246778899999999987 99999999999999988755433
Q ss_pred E-ecccceE
Q psy3840 116 F-EGHTRVY 123 (131)
Q Consensus 116 ~-~~~~~~~ 123 (131)
. +.|...+
T Consensus 358 ~g~~h~nqI 366 (603)
T KOG0318|consen 358 AGKGHTNQI 366 (603)
T ss_pred ccccccceE
Confidence 2 4444443
No 39
>KOG0318|consensus
Probab=99.85 E-value=8.7e-20 Score=118.35 Aligned_cols=111 Identities=20% Similarity=0.382 Sum_probs=101.4
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee---cCCCCeE
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS---FHSAPAL 83 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~---~~~~~v~ 83 (131)
.-++++|++|++|-+|+-. .+...++..|...|.+++|+|||+.+++.+.||++.+||-.+++.+..+. .|.+.|.
T Consensus 160 PfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIf 239 (603)
T KOG0318|consen 160 PFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIF 239 (603)
T ss_pred ceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEE
Confidence 3578999999999999854 67777888999999999999999999999999999999999999998887 7899999
Q ss_pred EEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEec
Q psy3840 84 DVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 84 ~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
+++|+||++ +++++.|.+++|||..+.+.++++.-
T Consensus 240 alsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~ 275 (603)
T KOG0318|consen 240 ALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPM 275 (603)
T ss_pred EEEECCCCceEEEecCCceEEEEEeeccceEEEeec
Confidence 999999976 99999999999999999988888753
No 40
>KOG0645|consensus
Probab=99.85 E-value=2.3e-19 Score=108.26 Aligned_cols=121 Identities=26% Similarity=0.507 Sum_probs=107.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC---CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc---ceeeeee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD---GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG---QCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~---~~~~~~~ 76 (131)
+|+|.|++|++|+-|.++.+|.-. .+.+..+.+|+..|.+++|+++|++|++++.|+++-+|....+ ++...++
T Consensus 68 Awsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~ 147 (312)
T KOG0645|consen 68 AWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQ 147 (312)
T ss_pred eecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeec
Confidence 589999999999999999999754 5778899999999999999999999999999999999998754 5677889
Q ss_pred cCCCCeEEEEEcCC-CcEEEEeCCCcEEEEeCC---CCeeeEEEecccceE
Q psy3840 77 FHSAPALDVDWQSN-TSFASCSTDQHIHVCKLH---SDKPVKSFEGHTRVY 123 (131)
Q Consensus 77 ~~~~~v~~~~~~~~-~~~~~~~~d~~i~i~d~~---~~~~~~~~~~~~~~~ 123 (131)
.|...|-.+.|+|. ..|++++.|++|++|+-. ..++.+++.+|...+
T Consensus 148 ~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TV 198 (312)
T KOG0645|consen 148 EHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTV 198 (312)
T ss_pred cccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceE
Confidence 99999999999997 458999999999999866 337899999988644
No 41
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.85 E-value=1.9e-19 Score=126.48 Aligned_cols=119 Identities=18% Similarity=0.352 Sum_probs=101.7
Q ss_pred CCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeE
Q psy3840 6 NNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 83 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~ 83 (131)
+++.+|++++.|++|++||+. ++.+..+.+|.+.|.+++|+| ++.++++++.|+.+++||++++..+..+..+ ..+.
T Consensus 543 ~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~ 621 (793)
T PLN00181 543 YIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANIC 621 (793)
T ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeE
Confidence 357899999999999999987 667788889999999999997 7899999999999999999999888777754 6788
Q ss_pred EEEEcC-CCc-EEEEeCCCcEEEEeCCCCe-eeEEEecccceEEE
Q psy3840 84 DVDWQS-NTS-FASCSTDQHIHVCKLHSDK-PVKSFEGHTRVYYL 125 (131)
Q Consensus 84 ~~~~~~-~~~-~~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~ 125 (131)
++.|.+ ++. +++|+.|+.|++||+++.. ++..+.+|...+..
T Consensus 622 ~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~ 666 (793)
T PLN00181 622 CVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSY 666 (793)
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEE
Confidence 999965 465 8999999999999998765 56677778766543
No 42
>KOG0265|consensus
Probab=99.85 E-value=5e-20 Score=112.42 Aligned_cols=124 Identities=18% Similarity=0.241 Sum_probs=109.0
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
|.+|++.+++++.|.+++.||.+ |+....+++|...+..+.-+. ...++.+++.|+++++||+++...+.++.. ..+
T Consensus 98 ~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~-kyq 176 (338)
T KOG0265|consen 98 GMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN-KYQ 176 (338)
T ss_pred eccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcccc-cee
Confidence 67899999999999999999987 899999999999999887444 445677888999999999999988877764 468
Q ss_pred eEEEEEcCCC-cEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEEee
Q psy3840 82 ALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLAMD 128 (131)
Q Consensus 82 v~~~~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 128 (131)
++++.|..++ ++.+|+=|+.|++||++..+.....++|...+..++.
T Consensus 177 ltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsl 224 (338)
T KOG0265|consen 177 LTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSL 224 (338)
T ss_pred EEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEe
Confidence 8999998775 4999999999999999999999999999999887764
No 43
>KOG0302|consensus
Probab=99.85 E-value=5.2e-20 Score=115.36 Aligned_cols=105 Identities=28% Similarity=0.541 Sum_probs=91.0
Q ss_pred ccC-CCCEEEEEeCCCeEEEEcCCC---CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC---cceeeeee
Q psy3840 4 SRN-NGSFLATGSYDGYARIWTSDG---SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS---GQCEQQFS 76 (131)
Q Consensus 4 ~~~-~~~~l~~~~~d~~i~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~---~~~~~~~~ 76 (131)
||| ....|++|+-||.|+|||+.. +.....+.|.+-|..+.|+....++++|+.||++++||++. ++++..+.
T Consensus 265 WSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk 344 (440)
T KOG0302|consen 265 WSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFK 344 (440)
T ss_pred cCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEE
Confidence 555 557889999999999999872 23444588999999999999888999999999999999986 57788999
Q ss_pred cCCCCeEEEEEcCC--CcEEEEeCCCcEEEEeCC
Q psy3840 77 FHSAPALDVDWQSN--TSFASCSTDQHIHVCKLH 108 (131)
Q Consensus 77 ~~~~~v~~~~~~~~--~~~~~~~~d~~i~i~d~~ 108 (131)
.|..+|+++.|+|. +.+++++.|.+|.+||+.
T Consensus 345 ~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 345 YHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred eccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 99999999999996 448999999999999985
No 44
>KOG0289|consensus
Probab=99.84 E-value=1.7e-19 Score=114.72 Aligned_cols=125 Identities=20% Similarity=0.281 Sum_probs=104.2
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeeccc--ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQ--HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~--~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (131)
.+|+|++|+++++|+..-+.|++ +..+..... ..-.+++.+|+|||..+.+|..|+.+++||+.++..+..|.+|.+
T Consensus 311 ~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~ 390 (506)
T KOG0289|consen 311 LHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTG 390 (506)
T ss_pred eccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCC
Confidence 57899999999999999999987 444433322 223589999999999999999999999999999999999999999
Q ss_pred CeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccc--eEEEEee
Q psy3840 81 PALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTR--VYYLAMD 128 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~~~~ 128 (131)
+|..++|+.+|. ++++..|+.|++||+|..+...++..... .....+|
T Consensus 391 ~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD 441 (506)
T KOG0289|consen 391 PVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFD 441 (506)
T ss_pred ceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEc
Confidence 999999999998 89999999999999998887777754433 3444443
No 45
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.84 E-value=8e-19 Score=108.82 Aligned_cols=122 Identities=30% Similarity=0.547 Sum_probs=105.7
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.|+|+++++++++.+|.+++|+.. ++....+..|...+..+.|+|+++.+++++.++.+++||+.+++.+..+..+...
T Consensus 16 ~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 95 (289)
T cd00200 16 AFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSY 95 (289)
T ss_pred EEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCc
Confidence 478899999999999999999987 5566777788889999999999999999999999999999998888888888889
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEE
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYY 124 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 124 (131)
+.++.|++++. +++++.++.+.+||+++++.+..+..|...+.
T Consensus 96 i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~ 139 (289)
T cd00200 96 VSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVN 139 (289)
T ss_pred EEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEE
Confidence 99999999877 55566699999999998888888877765443
No 46
>KOG0291|consensus
Probab=99.84 E-value=2.3e-19 Score=120.60 Aligned_cols=121 Identities=21% Similarity=0.361 Sum_probs=109.0
Q ss_pred cccCCCCEEEEEeC-CCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC
Q psy3840 3 SSRNNGSFLATGSY-DGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (131)
+|+..|+.||.|+. -|.+-+|+-+ ..-+...++|...+.+++++|||+++++|+.||.|++||..++-+..++..|+.
T Consensus 314 ~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts 393 (893)
T KOG0291|consen 314 SFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTS 393 (893)
T ss_pred EecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCC
Confidence 46778999999887 4789999976 556777889999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceE
Q psy3840 81 PALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVY 123 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 123 (131)
.|+.+.|+..++ +++.+-||+|+.||+...+..+++..+...-
T Consensus 394 ~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~Q 437 (893)
T KOG0291|consen 394 GVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQ 437 (893)
T ss_pred ceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCcee
Confidence 999999999887 8999999999999999999999987665443
No 47
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.83 E-value=8.2e-19 Score=123.34 Aligned_cols=117 Identities=17% Similarity=0.348 Sum_probs=98.7
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCC---------ceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCccee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGS---------LKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCE 72 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~---------~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~ 72 (131)
+|+|+++++++|+.|+.|++|+.... +...+. +...+.+++|+| .+.++++++.|+++++||+.+++.+
T Consensus 490 ~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~ 568 (793)
T PLN00181 490 GFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLV 568 (793)
T ss_pred EECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEE
Confidence 58899999999999999999997421 112222 346789999988 5789999999999999999999988
Q ss_pred eeeecCCCCeEEEEEcC-CCc-EEEEeCCCcEEEEeCCCCeeeEEEeccc
Q psy3840 73 QQFSFHSAPALDVDWQS-NTS-FASCSTDQHIHVCKLHSDKPVKSFEGHT 120 (131)
Q Consensus 73 ~~~~~~~~~v~~~~~~~-~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~ 120 (131)
..+..|...|++++|+| ++. +++++.|+.|++||++++..+..+..+.
T Consensus 569 ~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~ 618 (793)
T PLN00181 569 TEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA 618 (793)
T ss_pred EEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCC
Confidence 89999999999999997 555 8999999999999999998888776554
No 48
>KOG0303|consensus
Probab=99.83 E-value=7.2e-20 Score=115.37 Aligned_cols=119 Identities=21% Similarity=0.338 Sum_probs=105.0
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC--------CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD--------GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQ 73 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~--------~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~ 73 (131)
|...+.+.||+|+.|.+|.+|.+. .+++..+.+|...|--++|+| -.+.+++++.|.++.+||+.+++.+.
T Consensus 89 w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali 168 (472)
T KOG0303|consen 89 WCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALI 168 (472)
T ss_pred cCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceee
Confidence 444477899999999999999976 356788899999999999999 56788899999999999999999988
Q ss_pred eeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccce
Q psy3840 74 QFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRV 122 (131)
Q Consensus 74 ~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 122 (131)
.+. |...|+++.|+.+|. +++.+.|.+|+|||.++++.+..-.+|.+.
T Consensus 169 ~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~ 217 (472)
T KOG0303|consen 169 TLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGA 217 (472)
T ss_pred ecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCC
Confidence 887 889999999999977 899999999999999999999888777653
No 49
>PTZ00421 coronin; Provisional
Probab=99.83 E-value=1.1e-18 Score=116.37 Aligned_cols=122 Identities=19% Similarity=0.204 Sum_probs=97.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCCCc--------------eeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDGSL--------------KSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAAS 68 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~~~--------------~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~ 68 (131)
.++++..+++++.+.....|+..|.. ...+.+|.+.|.+++|+| ++.++++++.|++|++||+.+
T Consensus 28 ~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~ 107 (493)
T PTZ00421 28 ALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPE 107 (493)
T ss_pred ccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCC
Confidence 34566666666666666677654221 124678999999999999 889999999999999999976
Q ss_pred c-------ceeeeeecCCCCeEEEEEcCCC--cEEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 69 G-------QCEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 69 ~-------~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
+ +.+..+.+|...|.+++|+|++ .+++++.|+.|++||+++++.+..+..|...+..
T Consensus 108 ~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~s 173 (493)
T PTZ00421 108 EGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITS 173 (493)
T ss_pred CccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEE
Confidence 4 3456778899999999999974 3899999999999999999999888888776543
No 50
>KOG0310|consensus
Probab=99.83 E-value=1.2e-19 Score=116.41 Aligned_cols=123 Identities=19% Similarity=0.277 Sum_probs=103.0
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCC-CceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDG-SLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
|-.||+++++|+..|.|++||.+. ..+..+..|+.++..+.|+| ++..+++|+.|+.+++||+.+......+.+|++-
T Consensus 76 fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDY 155 (487)
T KOG0310|consen 76 FRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDY 155 (487)
T ss_pred eecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcce
Confidence 567899999999999999999653 45677889999999999999 5567778888999999999998876688899999
Q ss_pred eEEEEEcCCC-c-EEEEeCCCcEEEEeCCCC-eeeEEEecccceEEEEe
Q psy3840 82 ALDVDWQSNT-S-FASCSTDQHIHVCKLHSD-KPVKSFEGHTRVYYLAM 127 (131)
Q Consensus 82 v~~~~~~~~~-~-~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~ 127 (131)
|.+.+|+|.+ . +++|+.||.|++||+++. ..+.++. |..++..++
T Consensus 156 VR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl 203 (487)
T KOG0310|consen 156 VRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVL 203 (487)
T ss_pred eEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEE
Confidence 9999999963 3 899999999999999987 5566655 555554443
No 51
>KOG0276|consensus
Probab=99.83 E-value=2.8e-19 Score=118.23 Aligned_cols=123 Identities=27% Similarity=0.390 Sum_probs=112.2
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC-cceeeeeecCCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS-GQCEQQFSFHSAP 81 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~-~~~~~~~~~~~~~ 81 (131)
|-+..+.+++|++|..|++|+.+ ++.+..+..|.+.|++++.+|...++++++.|-.|++||-+. ..+.+++.+|..-
T Consensus 63 fiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~Hy 142 (794)
T KOG0276|consen 63 FIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHY 142 (794)
T ss_pred eeeccceEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceE
Confidence 44567899999999999999988 889999999999999999999999999999999999999886 4677889999999
Q ss_pred eEEEEEcCC--CcEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 82 ALDVDWQSN--TSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 82 v~~~~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
|+.++|.|. +.+++++-|++|+||.+.+..+.-++++|...++++
T Consensus 143 VMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~V 189 (794)
T KOG0276|consen 143 VMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCV 189 (794)
T ss_pred EEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceE
Confidence 999999996 349999999999999999999999999999888765
No 52
>KOG0293|consensus
Probab=99.83 E-value=9.9e-20 Score=115.40 Aligned_cols=106 Identities=27% Similarity=0.490 Sum_probs=95.7
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC----CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeec-
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD----GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF- 77 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~- 77 (131)
.||++|.+||+++.|.+..+|.+. -+...++.+|..+|..+.|+||.+++++++.+..+.+||..+|.....+..
T Consensus 231 ~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~ 310 (519)
T KOG0293|consen 231 QFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSG 310 (519)
T ss_pred EEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccC
Confidence 589999999999999999999864 355788899999999999999999999999999999999999998777764
Q ss_pred CCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCC
Q psy3840 78 HSAPALDVDWQSNTS-FASCSTDQHIHVCKLH 108 (131)
Q Consensus 78 ~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~ 108 (131)
+...+.+.+|.||+. +++|+.|+.+..||+.
T Consensus 311 ~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD 342 (519)
T KOG0293|consen 311 LGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD 342 (519)
T ss_pred cCCCcceeEEccCCceeEecCCCCcEEEecCC
Confidence 357899999999987 9999999999999986
No 53
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.83 E-value=2e-18 Score=107.07 Aligned_cols=121 Identities=28% Similarity=0.485 Sum_probs=104.2
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.|+++++.+++++.++.|++|++. ++....+..|...+.++.|+|++.++++++.++.+++||+++++....+..+...
T Consensus 58 ~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 137 (289)
T cd00200 58 AASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDW 137 (289)
T ss_pred EECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCc
Confidence 367888899999999999999987 4677777888889999999999888888888999999999988888888878888
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceE
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVY 123 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 123 (131)
+.++.|+|++. +++++.++.+++||+++++.+..+..|...+
T Consensus 138 i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i 180 (289)
T cd00200 138 VNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEV 180 (289)
T ss_pred EEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCcccc
Confidence 99999999877 5555559999999999888888887776443
No 54
>KOG0296|consensus
Probab=99.83 E-value=1e-18 Score=109.11 Aligned_cols=122 Identities=18% Similarity=0.343 Sum_probs=109.4
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
+.+|+.+++++|+.|..-.+|++. +.....+.+|.+.|.++.|+.+|.++++|+.+|.+++|...++.....+...-..
T Consensus 71 sl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~d 150 (399)
T KOG0296|consen 71 SLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVED 150 (399)
T ss_pred EeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCc
Confidence 357899999999999999999987 7788889999999999999999999999999999999999999888888755667
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEE
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYY 124 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 124 (131)
+.-+.|+|.+. ++.|+.||.+.+|.+.++...+.+.+|..+.+
T Consensus 151 ieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct 194 (399)
T KOG0296|consen 151 IEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCT 194 (399)
T ss_pred eEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcc
Confidence 88899999877 88999999999999998878888888876653
No 55
>KOG0283|consensus
Probab=99.82 E-value=1.3e-19 Score=122.18 Aligned_cols=107 Identities=27% Similarity=0.510 Sum_probs=91.9
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCC--------------------------------------------------------
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDG-------------------------------------------------------- 27 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~-------------------------------------------------------- 27 (131)
|++||++||+|+.|+.|+||.+..
T Consensus 275 FS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~~~~~p~~~ 354 (712)
T KOG0283|consen 275 FSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSPCVLLPLKA 354 (712)
T ss_pred eCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCccccCCCcc
Confidence 899999999999999999996321
Q ss_pred -----CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCC-Cc-EEEEeCCC
Q psy3840 28 -----SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSN-TS-FASCSTDQ 100 (131)
Q Consensus 28 -----~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~-~~-~~~~~~d~ 100 (131)
+++..+.+|.+.|..+.|+. ..+|++++.|.+++||++...+++..|. |..-|+|++|+|- .+ +++|+-|+
T Consensus 355 f~f~ekP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~ 432 (712)
T KOG0283|consen 355 FVFSEKPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDG 432 (712)
T ss_pred ccccccchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeeccccc
Confidence 34456678999999999985 4578999999999999999999998887 7889999999994 44 99999999
Q ss_pred cEEEEeCCCCee
Q psy3840 101 HIHVCKLHSDKP 112 (131)
Q Consensus 101 ~i~i~d~~~~~~ 112 (131)
+++||++...+.
T Consensus 433 KvRiWsI~d~~V 444 (712)
T KOG0283|consen 433 KVRLWSISDKKV 444 (712)
T ss_pred ceEEeecCcCee
Confidence 999999875443
No 56
>KOG0295|consensus
Probab=99.82 E-value=6.6e-19 Score=109.92 Aligned_cols=122 Identities=22% Similarity=0.340 Sum_probs=110.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
|-|.|..+++++.|.+|+.|++. +-++.++.+|...+..++.+.||..+++++.|.++++|-+.++++...+..|..++
T Consensus 201 f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~v 280 (406)
T KOG0295|consen 201 FLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPV 280 (406)
T ss_pred EEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccce
Confidence 45778999999999999999998 88999999999999999999999999999999999999999999988999999999
Q ss_pred EEEEEcCC---------------Cc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 83 LDVDWQSN---------------TS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 83 ~~~~~~~~---------------~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
.+++|.|+ ++ +.+++.|++|++||+.++.++.++.+|.+-+..
T Consensus 281 Eci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~ 339 (406)
T KOG0295|consen 281 ECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRG 339 (406)
T ss_pred EEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeee
Confidence 99999541 13 678899999999999999999999998876643
No 57
>KOG0264|consensus
Probab=99.82 E-value=4.8e-19 Score=112.64 Aligned_cols=103 Identities=20% Similarity=0.420 Sum_probs=90.8
Q ss_pred CCCEEEEEeCCCeEEEEcCC---CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCC-cceeeeeecCCCC
Q psy3840 7 NGSFLATGSYDGYARIWTSD---GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAAS-GQCEQQFSFHSAP 81 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~---~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~-~~~~~~~~~~~~~ 81 (131)
+...+++++.|+.+.|||++ .+.......|++++.|++|+| ++..+|+|+.|+++.+||+|+ .+++..+.+|...
T Consensus 239 h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~de 318 (422)
T KOG0264|consen 239 HEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDE 318 (422)
T ss_pred chhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcc
Confidence 56788889999999999987 355566788999999999999 788899999999999999997 4567888899999
Q ss_pred eEEEEEcCCCc--EEEEeCCCcEEEEeCCC
Q psy3840 82 ALDVDWQSNTS--FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 82 v~~~~~~~~~~--~~~~~~d~~i~i~d~~~ 109 (131)
|..+.|+|... +++++.|+.+.|||+..
T Consensus 319 v~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 319 VFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred eEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 99999999743 89999999999999965
No 58
>KOG0274|consensus
Probab=99.82 E-value=1.5e-18 Score=116.36 Aligned_cols=117 Identities=27% Similarity=0.430 Sum_probs=106.9
Q ss_pred CCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEE
Q psy3840 7 NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDV 85 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~ 85 (131)
-+.++++|+.|.++++||.. |.+...+.+|.+.+.++.. .+..+++|+.|.++++|+++++..+..+.+|..+|.++
T Consensus 260 ~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~--~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v 337 (537)
T KOG0274|consen 260 GGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTI--DPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCV 337 (537)
T ss_pred CCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEc--cCceEeeccCCceEEEEeccCcceEEEeccccccEEEE
Confidence 47899999999999999987 9999999999999999865 45667788999999999999999999999999999999
Q ss_pred EEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 86 DWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 86 ~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
... ++.+++|+.|+.|.+||.++++++.++++|...+.++
T Consensus 338 ~~~-~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl 377 (537)
T KOG0274|consen 338 QLD-EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSL 377 (537)
T ss_pred Eec-CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEE
Confidence 997 5569999999999999999999999999999988774
No 59
>KOG0292|consensus
Probab=99.82 E-value=2.4e-19 Score=122.50 Aligned_cols=106 Identities=21% Similarity=0.288 Sum_probs=100.8
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.|+|+..++++|++|-.|++|+.+ .+++.++.+|.+.|+.+.|++.-.+++|++.|.+|++|+..+++++..+.+|..-
T Consensus 58 ~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHY 137 (1202)
T KOG0292|consen 58 DFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHY 137 (1202)
T ss_pred eecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceE
Confidence 489999999999999999999987 7888999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCC-CcEEEEeCCCcEEEEeCC
Q psy3840 82 ALDVDWQSN-TSFASCSTDQHIHVCKLH 108 (131)
Q Consensus 82 v~~~~~~~~-~~~~~~~~d~~i~i~d~~ 108 (131)
|+|..|+|. ..+++++-|.+|+|||+.
T Consensus 138 VMcAqFhptEDlIVSaSLDQTVRVWDis 165 (1202)
T KOG0292|consen 138 VMCAQFHPTEDLIVSASLDQTVRVWDIS 165 (1202)
T ss_pred EEeeccCCccceEEEecccceEEEEeec
Confidence 999999995 559999999999999985
No 60
>KOG0306|consensus
Probab=99.82 E-value=3.8e-19 Score=119.47 Aligned_cols=124 Identities=21% Similarity=0.408 Sum_probs=115.2
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
++|||+.+|+++--|.+|++|-+. -+....+.+|.-||.||..+|+++.+++|+.|..+++|-+.=|.+-..+.+|.+.
T Consensus 515 ~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDS 594 (888)
T KOG0306|consen 515 SVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDS 594 (888)
T ss_pred EEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCc
Confidence 479999999999999999999887 5677788999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
|+++.|.|+.. +.+++.|+.++-||-...+.++.+.+|...+.+.
T Consensus 595 vm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cL 640 (888)
T KOG0306|consen 595 VMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCL 640 (888)
T ss_pred eeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeee
Confidence 99999999876 8999999999999999999999999998877554
No 61
>KOG0269|consensus
Probab=99.81 E-value=2e-19 Score=120.94 Aligned_cols=108 Identities=23% Similarity=0.465 Sum_probs=94.0
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCc-ceeeeeecCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASG-QCEQQFSFHSA 80 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~-~~~~~~~~~~~ 80 (131)
.+-..++|++|++||+|++||+. .+...++.+..+.|+.++|+| .+..++++...|.+.+||++.. ++...+..|.+
T Consensus 142 h~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~G 221 (839)
T KOG0269|consen 142 HSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNG 221 (839)
T ss_pred ccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccC
Confidence 34467899999999999999997 556667777888999999999 7889999999999999999975 45677888999
Q ss_pred CeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCe
Q psy3840 81 PALDVDWQSNTS-FASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~ 111 (131)
+|.++.|+|++. |++|+.|+.|+|||..+.+
T Consensus 222 pV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~ 253 (839)
T KOG0269|consen 222 PVLCLNWHPNREWLATGGRDKMVKIWDMTDSR 253 (839)
T ss_pred ceEEEeecCCCceeeecCCCccEEEEeccCCC
Confidence 999999999866 8999999999999997653
No 62
>PTZ00420 coronin; Provisional
Probab=99.81 E-value=4.9e-18 Score=114.46 Aligned_cols=105 Identities=17% Similarity=0.255 Sum_probs=86.6
Q ss_pred EeCCCeEEEEcCC-CCceeecccccccEEEEEEcCC-CCEEEEEeCCCcEEEEECCCcc--------eeeeeecCCCCeE
Q psy3840 14 GSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKR-GNYILSAGVDKTTIIWDAASGQ--------CEQQFSFHSAPAL 83 (131)
Q Consensus 14 ~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~--------~~~~~~~~~~~v~ 83 (131)
|+.++.+++|+.. ...+..+.+|.+.|.+++|+|+ +.++++++.|++|++||+.++. .+..+.+|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 4456778888865 4566778899999999999995 7899999999999999997642 2345677888999
Q ss_pred EEEEcCCCc--EEEEeCCCcEEEEeCCCCeeeEEEec
Q psy3840 84 DVDWQSNTS--FASCSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 84 ~~~~~~~~~--~~~~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
+++|+|++. +++++.|+.|++||+++++.+..+..
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~ 166 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM 166 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 999999865 57889999999999999887766653
No 63
>KOG0310|consensus
Probab=99.81 E-value=1.1e-18 Score=112.06 Aligned_cols=122 Identities=16% Similarity=0.238 Sum_probs=95.9
Q ss_pred ccC-CCCEEEEEeCCCeEEEEcCCCCcee-ecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCc-ceeeeeecCC
Q psy3840 4 SRN-NGSFLATGSYDGYARIWTSDGSLKS-TLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASG-QCEQQFSFHS 79 (131)
Q Consensus 4 ~~~-~~~~l~~~~~d~~i~~~~~~~~~~~-~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~-~~~~~~~~~~ 79 (131)
|+| ++..+++|++|+.+++||+.+..+. .+.+|++.|.|.+|+| ++..+++|+.||.|++||.+.. ..+..+. |.
T Consensus 118 f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg 196 (487)
T KOG0310|consen 118 FSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HG 196 (487)
T ss_pred ecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CC
Confidence 455 5567778888999999999855444 7889999999999999 6779999999999999999986 5555555 67
Q ss_pred CCeEEEEEcCCCcEEEEeCCCcEEEEeCCCC-eeeEEEecccceEEEE
Q psy3840 80 APALDVDWQSNTSFASCSTDQHIHVCKLHSD-KPVKSFEGHTRVYYLA 126 (131)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~ 126 (131)
.+|.++.+-|.|.++.....+.+++||+.+| +.+.....|...+++.
T Consensus 197 ~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL 244 (487)
T KOG0310|consen 197 CPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCL 244 (487)
T ss_pred CceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEE
Confidence 8999999999977444445578999999966 4455555477766553
No 64
>KOG0264|consensus
Probab=99.81 E-value=5.5e-19 Score=112.39 Aligned_cols=120 Identities=23% Similarity=0.399 Sum_probs=100.8
Q ss_pred CCCEEEEEeCCCeEEEEcCC--C------CceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECC--Ccceeeee
Q psy3840 7 NGSFLATGSYDGYARIWTSD--G------SLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAA--SGQCEQQF 75 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~--~------~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~--~~~~~~~~ 75 (131)
....+++++.|+.|++||++ + .+...+.+|+..|..++|++ ...++++++.|+.+.|||.| +.++....
T Consensus 189 ~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~ 268 (422)
T KOG0264|consen 189 QEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSV 268 (422)
T ss_pred cceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccc
Confidence 45678889999999999987 1 23456788999999999999 77789999999999999999 55666667
Q ss_pred ecCCCCeEEEEEcCCC-c-EEEEeCCCcEEEEeCCCC-eeeEEEecccceEEEE
Q psy3840 76 SFHSAPALDVDWQSNT-S-FASCSTDQHIHVCKLHSD-KPVKSFEGHTRVYYLA 126 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~~-~-~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~ 126 (131)
..|..++.+++|+|-+ . ||+|+.|++|.+||+|.. +++.++.+|...+..+
T Consensus 269 ~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V 322 (422)
T KOG0264|consen 269 KAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQV 322 (422)
T ss_pred cccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEE
Confidence 7899999999999964 3 899999999999999976 6788888888776544
No 65
>KOG0308|consensus
Probab=99.81 E-value=1.8e-18 Score=114.72 Aligned_cols=122 Identities=21% Similarity=0.365 Sum_probs=108.0
Q ss_pred cCCCCEEEEEeCCCeEEEEcCC-C----------Cceeecc-cccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCccee
Q psy3840 5 RNNGSFLATGSYDGYARIWTSD-G----------SLKSTLG-QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 72 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~-~----------~~~~~~~-~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~ 72 (131)
.++...+++|+-|+.|.+||++ + .....+. ++...+.+++.++.+..+++|+..+-+++||+++++.+
T Consensus 127 ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~ki 206 (735)
T KOG0308|consen 127 AKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKI 206 (735)
T ss_pred ccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccce
Confidence 4678899999999999999987 2 1122333 67889999999999999999999999999999999999
Q ss_pred eeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 73 QQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 73 ~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
..+++|+..|..+..+++|. +++++.|++|++||+...+++.++..|...+...
T Consensus 207 mkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL 261 (735)
T KOG0308|consen 207 MKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWAL 261 (735)
T ss_pred eeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEE
Confidence 99999999999999999986 9999999999999999999999999998886544
No 66
>KOG0267|consensus
Probab=99.80 E-value=5.1e-20 Score=123.06 Aligned_cols=120 Identities=22% Similarity=0.378 Sum_probs=109.0
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
|+++...|++|+.+|+|++||+. .+.++++.+|..++.++.|+|-+.+.++|+.|..+++||.+..-+...+.+|...+
T Consensus 78 f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv 157 (825)
T KOG0267|consen 78 FDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVV 157 (825)
T ss_pred cCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCccee
Confidence 56777889999999999999997 77888999999999999999999999999999999999999888888999888889
Q ss_pred EEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceE
Q psy3840 83 LDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVY 123 (131)
Q Consensus 83 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 123 (131)
..+.|+|+|+ ++.++.|..++|||+..|+.+..|..|...+
T Consensus 158 ~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v 199 (825)
T KOG0267|consen 158 DVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKV 199 (825)
T ss_pred EEEeecCCCceeeccCCcceeeeecccccccccccccccccc
Confidence 9999999998 7888889999999999999988888776544
No 67
>KOG0283|consensus
Probab=99.80 E-value=1.4e-18 Score=117.24 Aligned_cols=112 Identities=15% Similarity=0.219 Sum_probs=93.7
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
+|+. +++|++++-|.+|++|++..+.-.....|.+.|+|++|+| |.+++++|+-|+.++||++...+.+. +..-..-
T Consensus 376 SWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~-W~Dl~~l 453 (712)
T KOG0283|consen 376 SWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVD-WNDLRDL 453 (712)
T ss_pred cccc-CCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEe-ehhhhhh
Confidence 4675 5888999999999999998444444556999999999999 99999999999999999998776543 3444578
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEE
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~ 116 (131)
|++++|.|+|+ .+.|+-+|.+++|+.+..+.....
T Consensus 454 ITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~ 489 (712)
T KOG0283|consen 454 ITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDF 489 (712)
T ss_pred heeEEeccCCceEEEEEeccEEEEEEccCCeEEEee
Confidence 99999999999 788999999999999876655544
No 68
>KOG0274|consensus
Probab=99.80 E-value=6.1e-19 Score=118.26 Aligned_cols=118 Identities=25% Similarity=0.462 Sum_probs=106.7
Q ss_pred cCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeE
Q psy3840 5 RNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 83 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~ 83 (131)
.-.+..+.+|+.|.+|++|+++ +..+..+.+|.++|.++..+ +..+++|+.|++|++||+.+++++..+.+|...|.
T Consensus 298 ~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~ 375 (537)
T KOG0274|consen 298 TIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVY 375 (537)
T ss_pred EccCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEE
Confidence 3445677888999999999998 78888888899999999987 88999999999999999999999999999999999
Q ss_pred EEEEcCCCcEEEEeCCCcEEEEeCCCC-eeeEEEecccceEE
Q psy3840 84 DVDWQSNTSFASCSTDQHIHVCKLHSD-KPVKSFEGHTRVYY 124 (131)
Q Consensus 84 ~~~~~~~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~ 124 (131)
++.+.+...+++|+.|+.|++||+++. +++.++.+|...+.
T Consensus 376 sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~ 417 (537)
T KOG0274|consen 376 SLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVS 417 (537)
T ss_pred EEEecCcceEEeeeeccceEeecCCchhhhhhhhcCCccccc
Confidence 998877656999999999999999999 99999999987763
No 69
>KOG0973|consensus
Probab=99.80 E-value=1.3e-18 Score=120.08 Aligned_cols=127 Identities=25% Similarity=0.476 Sum_probs=108.0
Q ss_pred ccCCCCEEEEEe--CCCeEEEEcCC-------------CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy3840 4 SRNNGSFLATGS--YDGYARIWTSD-------------GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 68 (131)
Q Consensus 4 ~~~~~~~l~~~~--~d~~i~~~~~~-------------~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 68 (131)
.+|++..+++|+ .|+.+.+|+.. .+.+.....|.+.|.|+.|+|+|+++++|+.|+.+.+|+...
T Consensus 21 v~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~ 100 (942)
T KOG0973|consen 21 VHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAE 100 (942)
T ss_pred ecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecc
Confidence 589999999999 79999999865 133455677999999999999999999999999999998762
Q ss_pred ------------------cceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceE-EEEee
Q psy3840 69 ------------------GQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVY-YLAMD 128 (131)
Q Consensus 69 ------------------~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~~~~ 128 (131)
.+.+..+.+|...|..+.|+|++. +++++-|++|.+||.++.+.+..+.+|...+ ...+|
T Consensus 101 ~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~D 180 (942)
T KOG0973|consen 101 IGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWD 180 (942)
T ss_pred cCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEEC
Confidence 135567788999999999999987 8999999999999999999999999998765 44445
Q ss_pred ec
Q psy3840 129 LL 130 (131)
Q Consensus 129 ~~ 130 (131)
+.
T Consensus 181 P~ 182 (942)
T KOG0973|consen 181 PI 182 (942)
T ss_pred Cc
Confidence 43
No 70
>KOG0646|consensus
Probab=99.80 E-value=3.3e-18 Score=109.48 Aligned_cols=126 Identities=25% Similarity=0.357 Sum_probs=110.4
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECC---------Ccceee
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA---------SGQCEQ 73 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~---------~~~~~~ 73 (131)
-+|+|.+++.|+..|.+++|.+. |..+..+..|-..|+|+.|+-|+.++++|+.||.+.+|.+. +.+++.
T Consensus 89 s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~ 168 (476)
T KOG0646|consen 89 SSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLH 168 (476)
T ss_pred cCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCcccee
Confidence 36789999999899999999998 88888899999999999999999999999999999999764 245677
Q ss_pred eeecCCCCeEEEEEcCC---CcEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEEeee
Q psy3840 74 QFSFHSAPALDVDWQSN---TSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLAMDL 129 (131)
Q Consensus 74 ~~~~~~~~v~~~~~~~~---~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 129 (131)
.+..|.-+|+++...+. .++++++.|+++++||+..+..+.++.........++|+
T Consensus 169 ~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDp 227 (476)
T KOG0646|consen 169 IFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDP 227 (476)
T ss_pred eeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcc
Confidence 88889999999998765 459999999999999999999999887776666666665
No 71
>KOG0640|consensus
Probab=99.80 E-value=1.2e-18 Score=107.45 Aligned_cols=117 Identities=20% Similarity=0.401 Sum_probs=101.4
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCC-Cce---eecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeec-
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDG-SLK---STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF- 77 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~-~~~---~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~- 77 (131)
+|+|.|+++++|.+-.++++||++. ++. .--..|++.|+++.+++.+++.++++.||.|++||--+++++.++..
T Consensus 223 SfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~A 302 (430)
T KOG0640|consen 223 SFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNA 302 (430)
T ss_pred eecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhh
Confidence 5899999999999999999999872 221 22356999999999999999999999999999999999999988763
Q ss_pred C-CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecc
Q psy3840 78 H-SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 78 ~-~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
| ...|++..|..+++ +++.+.|..+++|.+.+++++..+.+-
T Consensus 303 H~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGA 346 (430)
T KOG0640|consen 303 HGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGA 346 (430)
T ss_pred cCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecC
Confidence 3 34789999999988 889999999999999999999988653
No 72
>KOG0296|consensus
Probab=99.80 E-value=4.4e-18 Score=106.29 Aligned_cols=115 Identities=23% Similarity=0.364 Sum_probs=103.5
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.|+.+|.+||+|+-+|.|++|... +.....+..--+.+.-|.|+|.+..++.|+.||.+.+|.+.++...+.+.+|..+
T Consensus 113 ~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ 192 (399)
T KOG0296|consen 113 SFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSP 192 (399)
T ss_pred EEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCC
Confidence 488999999999999999999987 5555555545567888999999999999999999999999998888999999999
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
+++-.|.|+|+ ++++..|++|++||+++++++..+.
T Consensus 193 ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 193 CTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred cccccccCCCceEEEEecCceEEEEecCCCceeEEec
Confidence 99999999988 8999999999999999999988876
No 73
>KOG0643|consensus
Probab=99.80 E-value=5.5e-18 Score=102.42 Aligned_cols=120 Identities=18% Similarity=0.320 Sum_probs=99.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEc-CCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee------
Q psy3840 4 SRNNGSFLATGSYDGYARIWT-SDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS------ 76 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~------ 76 (131)
|+.+|.+|.+++.|.+..+|- .+|+.+.++.+|++.|+|+..+.+.+.+++|+.|.++++||+++|+.+..+.
T Consensus 18 yN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk 97 (327)
T KOG0643|consen 18 YNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVK 97 (327)
T ss_pred ecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeE
Confidence 678999999999999999996 4799999999999999999999999999999999999999999998655431
Q ss_pred -----------------------------------------------cCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCC
Q psy3840 77 -----------------------------------------------FHSAPALDVDWQSNTS-FASCSTDQHIHVCKLH 108 (131)
Q Consensus 77 -----------------------------------------------~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~ 108 (131)
.+...++..-|.|-+. +++|..+|.|.+||.+
T Consensus 98 ~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~ 177 (327)
T KOG0643|consen 98 RVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDAR 177 (327)
T ss_pred EEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcc
Confidence 1234566777888776 8888899999999999
Q ss_pred CCe-eeEEEecccceE
Q psy3840 109 SDK-PVKSFEGHTRVY 123 (131)
Q Consensus 109 ~~~-~~~~~~~~~~~~ 123 (131)
+++ .+.+.+.|...+
T Consensus 178 ~g~~~v~s~~~h~~~I 193 (327)
T KOG0643|consen 178 TGKELVDSDEEHSSKI 193 (327)
T ss_pred cCceeeechhhhcccc
Confidence 874 445555565533
No 74
>KOG0316|consensus
Probab=99.80 E-value=1.5e-18 Score=103.28 Aligned_cols=106 Identities=15% Similarity=0.287 Sum_probs=78.4
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc--ceeeeeecCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG--QCEQQFSFHSA 80 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~--~~~~~~~~~~~ 80 (131)
.+.|+..+++|+.|..+.+||++ |+..+.+.+|.+.|..++|+.+...+++|+.|.++++||+++. ++++.+.....
T Consensus 67 ~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D 146 (307)
T KOG0316|consen 67 LSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKD 146 (307)
T ss_pred ccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcC
Confidence 46688899999999999999998 8999999999999999999999999999999999999999864 44555444334
Q ss_pred CeEEEEEcCCCcEEEEeCCCcEEEEeCCCC
Q psy3840 81 PALDVDWQSNTSFASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~ 110 (131)
.|.++... +..+++|+.||+++.||+|.|
T Consensus 147 ~V~Si~v~-~heIvaGS~DGtvRtydiR~G 175 (307)
T KOG0316|consen 147 GVSSIDVA-EHEIVAGSVDGTVRTYDIRKG 175 (307)
T ss_pred ceeEEEec-ccEEEeeccCCcEEEEEeecc
Confidence 44444332 112444444444444444443
No 75
>KOG0294|consensus
Probab=99.79 E-value=3e-18 Score=105.45 Aligned_cols=110 Identities=24% Similarity=0.301 Sum_probs=98.2
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCC--EEEEEeCCCcEEEEECCCcceeeeeecCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGN--YILSAGVDKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~--~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
+..-++.++++|+.|.+|++||.. ......+..|.+.|+++.|.+... .+++|+.||.|.+|+....+++..++.|.
T Consensus 48 avAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~ 127 (362)
T KOG0294|consen 48 ALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHK 127 (362)
T ss_pred EEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccc
Confidence 445678999999999999999987 566777788999999999998665 89999999999999999999999999999
Q ss_pred CCeEEEEEcCCCcE-EEEeCCCcEEEEeCCCCee
Q psy3840 80 APALDVDWQSNTSF-ASCSTDQHIHVCKLHSDKP 112 (131)
Q Consensus 80 ~~v~~~~~~~~~~~-~~~~~d~~i~i~d~~~~~~ 112 (131)
+.|+.++.+|.++| ++.+.|+.+++||+-+|+.
T Consensus 128 ~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~ 161 (362)
T KOG0294|consen 128 GQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRV 161 (362)
T ss_pred cccceeEecCCCceEEEEcCCceeeeehhhcCcc
Confidence 99999999999995 6778999999999977643
No 76
>KOG0269|consensus
Probab=99.79 E-value=2.9e-19 Score=120.12 Aligned_cols=124 Identities=20% Similarity=0.322 Sum_probs=106.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC----CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeec
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD----GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSF 77 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~----~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 77 (131)
|-.-+.++||+++.+|.|.+||+. .+.+..+..|+..+.++.|++ ...++++|++||.|++||++..+...++.+
T Consensus 95 W~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~ 174 (839)
T KOG0269|consen 95 WGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRS 174 (839)
T ss_pred cccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccc
Confidence 334567899999999999999987 345567788999999999999 788999999999999999999998888888
Q ss_pred CCCCeEEEEEcCC--CcEEEEeCCCcEEEEeCCCC-eeeEEEecccceEEEE
Q psy3840 78 HSAPALDVDWQSN--TSFASCSTDQHIHVCKLHSD-KPVKSFEGHTRVYYLA 126 (131)
Q Consensus 78 ~~~~v~~~~~~~~--~~~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~ 126 (131)
....+..++|+|. ..++++.+.|.+++||+|.. ++...+.+|.+++.++
T Consensus 175 nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~ 226 (839)
T KOG0269|consen 175 NSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCL 226 (839)
T ss_pred cchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEE
Confidence 8889999999996 34899999999999999976 5667778888776543
No 77
>KOG0640|consensus
Probab=99.79 E-value=1.5e-18 Score=106.98 Aligned_cols=115 Identities=17% Similarity=0.298 Sum_probs=96.9
Q ss_pred ccccCCCCEEEEEeCCCeEEEEcCC-------------------CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEE
Q psy3840 2 QSSRNNGSFLATGSYDGYARIWTSD-------------------GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTI 62 (131)
Q Consensus 2 ~~~~~~~~~l~~~~~d~~i~~~~~~-------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~ 62 (131)
.+|++||.++++|+.|..|++.|++ ...++++..|.+.|.++.|+|....+++++.|++++
T Consensus 118 aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvK 197 (430)
T KOG0640|consen 118 AAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVK 197 (430)
T ss_pred eeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCCCeEE
Confidence 4699999999999999999999976 034577888999999999999999999999999999
Q ss_pred EEECCCccee---eeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 63 IWDAASGQCE---QQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 63 ~~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
+||+.+.... +.++ ...++.++.|+|.|. ++.|.....+++||+++.++...-.
T Consensus 198 lFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsan 255 (430)
T KOG0640|consen 198 LFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN 255 (430)
T ss_pred EEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecC
Confidence 9999764332 2333 456899999999988 6777777899999999998877654
No 78
>KOG0305|consensus
Probab=99.79 E-value=2.7e-18 Score=112.66 Aligned_cols=121 Identities=24% Similarity=0.345 Sum_probs=107.9
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeeccc-ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeee-eecCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQ-HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ-FSFHS 79 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~-~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~-~~~~~ 79 (131)
.|+++|..|++|..+|.|.+||.. .+.+..+.+ |...|.+++|. +..+.+|+.++.|..+|++..+.... +.+|.
T Consensus 224 ~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~ 301 (484)
T KOG0305|consen 224 KWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHR 301 (484)
T ss_pred EECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhccc
Confidence 378999999999999999999987 666777777 99999999997 77889999999999999998766555 88899
Q ss_pred CCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 80 APALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 80 ~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
..|+.++|++++. +++|+.|+.+.|||....+++..+..|...+..
T Consensus 302 qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA 348 (484)
T KOG0305|consen 302 QEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKA 348 (484)
T ss_pred ceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeE
Confidence 9999999999987 999999999999999888999999999887643
No 79
>KOG0289|consensus
Probab=99.79 E-value=4.8e-18 Score=108.26 Aligned_cols=118 Identities=19% Similarity=0.418 Sum_probs=98.4
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC-CC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH-SA 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~-~~ 80 (131)
+|+|||.++.+|..|+.|++||++ +..+..+.+|+++|..++|+.+|-+++++..|+.+++||++.-+...++.-. ..
T Consensus 354 ~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~ 433 (506)
T KOG0289|consen 354 AFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKK 433 (506)
T ss_pred eEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccc
Confidence 589999999999999999999997 6677889999999999999999999999999999999999998877777643 34
Q ss_pred CeEEEEEcCCCc-EEEEeCCCcEEEEeCC--CCeeeEEEeccc
Q psy3840 81 PALDVDWQSNTS-FASCSTDQHIHVCKLH--SDKPVKSFEGHT 120 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d~~i~i~d~~--~~~~~~~~~~~~ 120 (131)
++.++.|.+.|. ++.++.+=+|++++-. ...++..+..|.
T Consensus 434 ~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~s 476 (506)
T KOG0289|consen 434 EVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHS 476 (506)
T ss_pred cceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcc
Confidence 799999999988 7777666667776633 345566555555
No 80
>KOG1407|consensus
Probab=99.78 E-value=8.2e-18 Score=101.33 Aligned_cols=117 Identities=17% Similarity=0.328 Sum_probs=101.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC------------------------------------------CCceeecccccccE
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD------------------------------------------GSLKSTLGQHKGPI 40 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~------------------------------------------~~~~~~~~~~~~~i 40 (131)
.|+|+|+++++++.|..|.+.|.. -+++..++.|+..+
T Consensus 113 ~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snC 192 (313)
T KOG1407|consen 113 TWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNC 192 (313)
T ss_pred EEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcce
Confidence 477888888888888777777653 14556677799999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecc
Q psy3840 41 FALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 41 ~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
.|+.|+|+|+++++|+.|-.+.+||+.+--+++.+....-+|..+.|+.+++ |++++.|..|-|=++++|..+..+...
T Consensus 193 icI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~ 272 (313)
T KOG1407|consen 193 ICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCE 272 (313)
T ss_pred EEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEeecc
Confidence 9999999999999999999999999999999999998888999999999998 899999999999999999888877643
No 81
>KOG0282|consensus
Probab=99.78 E-value=1.6e-18 Score=111.39 Aligned_cols=112 Identities=25% Similarity=0.469 Sum_probs=98.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCC-CEEEEEeCCCcEEEEECCCcceeeeeecCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRG-NYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (131)
.|+++|..+++++.|+.+++||++ |+.+..+. -...+.|+.|+|++ +.+++|+.|+.|+.||+++++.++.+..|-+
T Consensus 265 ~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg 343 (503)
T KOG0282|consen 265 SFNNCGTSFLSASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLG 343 (503)
T ss_pred hccccCCeeeeeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhh
Confidence 589999999999999999999998 66665544 33467999999977 8899999999999999999999999999999
Q ss_pred CeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEE
Q psy3840 81 PALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKS 115 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~ 115 (131)
.+..+.|-++++ +++.++|+.++||+.+...++..
T Consensus 344 ~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~ 379 (503)
T KOG0282|consen 344 AILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKN 379 (503)
T ss_pred heeeeEEccCCceEeeeccCccEEEEEcCCCccchh
Confidence 999999999987 99999999999999987765543
No 82
>KOG0313|consensus
Probab=99.78 E-value=2.1e-18 Score=108.20 Aligned_cols=105 Identities=27% Similarity=0.430 Sum_probs=93.2
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC---CC-ceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcc-eeeeeec
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD---GS-LKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQ-CEQQFSF 77 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~---~~-~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~-~~~~~~~ 77 (131)
++|..++|++|+.|..+++||.. +. ....+.+|.+.|..+.|+| +..++++++.|+++++||+++.+ ++..+.+
T Consensus 308 ~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~ 387 (423)
T KOG0313|consen 308 YSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAG 387 (423)
T ss_pred cccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeecc
Confidence 56788999999999999999986 33 3467889999999999999 66688999999999999999877 8899999
Q ss_pred CCCCeEEEEEcCCCcEEEEeCCCcEEEEeCC
Q psy3840 78 HSAPALDVDWQSNTSFASCSTDQHIHVCKLH 108 (131)
Q Consensus 78 ~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~ 108 (131)
|...|.++.|.....+++|+.|++++|+.-.
T Consensus 388 h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 388 HNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred CCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 9999999999877779999999999998643
No 83
>KOG0973|consensus
Probab=99.78 E-value=4.7e-18 Score=117.40 Aligned_cols=114 Identities=27% Similarity=0.460 Sum_probs=102.6
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC--------C-----------CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD--------G-----------SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIW 64 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~--------~-----------~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~ 64 (131)
|++||++||+|++|..|.+|... + +.+..+.+|+..|..++|+|++.++++++.|++|.+|
T Consensus 77 ~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiw 156 (942)
T KOG0973|consen 77 FSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIW 156 (942)
T ss_pred ECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEE
Confidence 89999999999999999999754 1 2566788999999999999999999999999999999
Q ss_pred ECCCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 65 DAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 65 d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
|.++.+.+..+.+|...|-.+.|+|-|+ +++-+.|++++||++.+......+.
T Consensus 157 n~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It 210 (942)
T KOG0973|consen 157 NAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSIT 210 (942)
T ss_pred ccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeec
Confidence 9999999999999999999999999998 8999999999999987665555544
No 84
>KOG1445|consensus
Probab=99.78 E-value=5.8e-19 Score=117.44 Aligned_cols=108 Identities=19% Similarity=0.339 Sum_probs=97.0
Q ss_pred ccC-CCCEEEEEeCCCeEEEEcCC--------CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceee
Q psy3840 4 SRN-NGSFLATGSYDGYARIWTSD--------GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQ 73 (131)
Q Consensus 4 ~~~-~~~~l~~~~~d~~i~~~~~~--------~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~ 73 (131)
|.| |.++|+++++||.|++|.+. ..+...+..|..+|+++.|+| -...+++++.|.+|++||+++++...
T Consensus 635 WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~ 714 (1012)
T KOG1445|consen 635 WDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYS 714 (1012)
T ss_pred cCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhh
Confidence 444 78999999999999999875 244567788999999999999 67789999999999999999999999
Q ss_pred eeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCe
Q psy3840 74 QFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 74 ~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~ 111 (131)
.+.+|.+.|..++|+|+|+ +++.+.|+++++|+.++++
T Consensus 715 ~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e 753 (1012)
T KOG1445|consen 715 RLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSRE 753 (1012)
T ss_pred eeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCC
Confidence 9999999999999999998 8999999999999998763
No 85
>KOG0313|consensus
Probab=99.78 E-value=6.6e-18 Score=106.02 Aligned_cols=116 Identities=22% Similarity=0.436 Sum_probs=98.7
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc---eeeeeecCCCCeE
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ---CEQQFSFHSAPAL 83 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~---~~~~~~~~~~~v~ 83 (131)
...+++++.|.+|+.||+. ++.+.++. ....+.++..+|...++++|+.|..+++||++++. ...++.+|..-|.
T Consensus 271 ~~v~yS~SwDHTIk~WDletg~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVs 349 (423)
T KOG0313|consen 271 ATVIYSVSWDHTIKVWDLETGGLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVS 349 (423)
T ss_pred CCceEeecccceEEEEEeecccceeeee-cCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhh
Confidence 6788999999999999998 55555544 34578999999999999999999999999999753 3466788999999
Q ss_pred EEEEcCCCc--EEEEeCCCcEEEEeCCCCe-eeEEEecccceEE
Q psy3840 84 DVDWQSNTS--FASCSTDQHIHVCKLHSDK-PVKSFEGHTRVYY 124 (131)
Q Consensus 84 ~~~~~~~~~--~~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~ 124 (131)
++.|+|... |++++.|+++++||+|+.. ++..+.+|..-+-
T Consensus 350 svkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl 393 (423)
T KOG0313|consen 350 SVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVL 393 (423)
T ss_pred heecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEE
Confidence 999999753 8999999999999999987 8999988866543
No 86
>KOG0281|consensus
Probab=99.78 E-value=1.5e-18 Score=108.42 Aligned_cols=117 Identities=25% Similarity=0.427 Sum_probs=95.1
Q ss_pred CCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc---eeeeeecCCCC
Q psy3840 6 NNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ---CEQQFSFHSAP 81 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~---~~~~~~~~~~~ 81 (131)
-+.+.+++|+.|.+|++||.+ ++++.++..|.+.|..+.|+ ..++++++.|.++.+||+.... +...+.+|...
T Consensus 245 yd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAa 322 (499)
T KOG0281|consen 245 YDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA 322 (499)
T ss_pred ccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhh
Confidence 356678888888899999887 88888888888888888885 5678888899999999887653 23456688888
Q ss_pred eEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 82 ALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 82 v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
|+.+.|+.. .+++++.|++|++|++.+++.++++.+|...+.+
T Consensus 323 VNvVdfd~k-yIVsASgDRTikvW~~st~efvRtl~gHkRGIAC 365 (499)
T KOG0281|consen 323 VNVVDFDDK-YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIAC 365 (499)
T ss_pred eeeeccccc-eEEEecCCceEEEEeccceeeehhhhccccccee
Confidence 998888543 4889999999999999999999999999877654
No 87
>KOG0306|consensus
Probab=99.77 E-value=1.1e-17 Score=112.56 Aligned_cols=121 Identities=21% Similarity=0.325 Sum_probs=109.1
Q ss_pred cCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeE
Q psy3840 5 RNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 83 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~ 83 (131)
+++.-.||+|..||.|++|+.. +....++.+|...|+++.|+..|..+++|+.|+.|.+||+-...-+..+.+|...++
T Consensus 74 ~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT 153 (888)
T KOG0306|consen 74 SDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSIT 153 (888)
T ss_pred cCCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHh
Confidence 4677788999999999999986 667778899999999999999999999999999999999988888889999999999
Q ss_pred EEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 84 DVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 84 ~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
...|..+.. +++.+.|+.|++||+.+..|..+...|...+..
T Consensus 154 ~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~ 196 (888)
T KOG0306|consen 154 QALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWA 196 (888)
T ss_pred HHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEE
Confidence 999988544 899999999999999999999999888877643
No 88
>KOG0278|consensus
Probab=99.77 E-value=1.8e-18 Score=103.84 Aligned_cols=117 Identities=20% Similarity=0.357 Sum_probs=105.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (131)
+|+.|.++|++|+.+..+++||++ ..+...+.+|++.|..+.|....+.+++...|+++++||.++++.+.++.. ..
T Consensus 107 af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~-~s 185 (334)
T KOG0278|consen 107 AFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEF-NS 185 (334)
T ss_pred EecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEec-CC
Confidence 588999999999999999999987 567788899999999999999999999999999999999999999999884 57
Q ss_pred CeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEeccc
Q psy3840 81 PALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120 (131)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~ 120 (131)
+|.++-.+++|++++-...+.|.+||.++...+..++...
T Consensus 186 ~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~ 225 (334)
T KOG0278|consen 186 PVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPC 225 (334)
T ss_pred CCcceeeccCCCEEEEecCceeEEeccccccceeeccCcc
Confidence 8999999999998888888999999999888877765443
No 89
>KOG0281|consensus
Probab=99.77 E-value=4.8e-19 Score=110.58 Aligned_cols=114 Identities=19% Similarity=0.379 Sum_probs=99.6
Q ss_pred CCCEEEEEeCCCeEEEEcCC----CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 7 NGSFLATGSYDGYARIWTSD----GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
++.++++++.|.++.+||.. -...+.+.+|...|..+.|+ .+++++++.|.++++|+..+++.++++.+|...+
T Consensus 286 ~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGI 363 (499)
T KOG0281|consen 286 SNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI 363 (499)
T ss_pred eCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccc
Confidence 46789999999999999976 23446678999999999886 5599999999999999999999999999999898
Q ss_pred EEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEE
Q psy3840 83 LDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYY 124 (131)
Q Consensus 83 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 124 (131)
.++.+ .++ +++|+.|.+|++||+..|.+++.+++|+..+.
T Consensus 364 AClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvR 404 (499)
T KOG0281|consen 364 ACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 404 (499)
T ss_pred eehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhh
Confidence 88766 456 78999999999999999999999999987553
No 90
>KOG0270|consensus
Probab=99.77 E-value=3.5e-17 Score=104.39 Aligned_cols=120 Identities=22% Similarity=0.381 Sum_probs=101.6
Q ss_pred CCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcce-eeeeecCCCCeE
Q psy3840 7 NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQC-EQQFSFHSAPAL 83 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~-~~~~~~~~~~v~ 83 (131)
..+.||+|+.|.+|.+||+. +++...+..|.++|.++.|+| .+..+++|+.|+++.+.|++.... -..++ ..+.|.
T Consensus 255 ~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VE 333 (463)
T KOG0270|consen 255 FRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVE 333 (463)
T ss_pred cceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccceE
Confidence 35789999999999999998 888888888999999999999 788999999999999999995322 23333 357899
Q ss_pred EEEEcCCCc--EEEEeCCCcEEEEeCCCC-eeeEEEecccceEEEEe
Q psy3840 84 DVDWQSNTS--FASCSTDQHIHVCKLHSD-KPVKSFEGHTRVYYLAM 127 (131)
Q Consensus 84 ~~~~~~~~~--~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~ 127 (131)
.++|.|... ++++..||.++-+|+|.. +++.+++.|...+..+.
T Consensus 334 kv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~ 380 (463)
T KOG0270|consen 334 KVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLS 380 (463)
T ss_pred EEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEE
Confidence 999998743 788899999999999976 89999999998887654
No 91
>KOG0649|consensus
Probab=99.76 E-value=5.1e-17 Score=97.36 Aligned_cols=79 Identities=24% Similarity=0.224 Sum_probs=67.7
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEE-cCCCcEEEEeCCCcEEEEeCCCCeeeEEEec
Q psy3840 40 IFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDW-QSNTSFASCSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 40 i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
|.+|-..|..+.++.++.|+.++.||+++|+..+.+++|.+-+.++.- +.++++++|+.||++++||+++++++..+..
T Consensus 117 INam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~ 196 (325)
T KOG0649|consen 117 INAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEP 196 (325)
T ss_pred cceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEecc
Confidence 344555676667777779999999999999999999999999999887 5567899999999999999999999888754
No 92
>KOG0305|consensus
Probab=99.76 E-value=2.8e-17 Score=107.91 Aligned_cols=122 Identities=22% Similarity=0.369 Sum_probs=105.2
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcC-CCCEEEEEe--CCCcEEEEECCCcceeeeeecC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNK-RGNYILSAG--VDKTTIIWDAASGQCEQQFSFH 78 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~--~d~~i~~~d~~~~~~~~~~~~~ 78 (131)
.|++|+.++|+|+.|+.+.+||.. ..++..+..|...|..++|+| ....||+|+ .|+.|++||..+++.+.....
T Consensus 308 kws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt- 386 (484)
T KOG0305|consen 308 KWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT- 386 (484)
T ss_pred EECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc-
Confidence 589999999999999999999985 677788899999999999999 778888875 499999999999998877764
Q ss_pred CCCeEEEEEcCCCc-EEEE--eCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 79 SAPALDVDWQSNTS-FASC--STDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
...|+.+.|++..+ ++++ -.++.|.||+..+.+.+..+.+|...+..
T Consensus 387 gsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~ 436 (484)
T KOG0305|consen 387 GSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLY 436 (484)
T ss_pred CCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEE
Confidence 57899999999865 5543 34668999999999999999999887643
No 93
>KOG1034|consensus
Probab=99.76 E-value=7.1e-18 Score=104.36 Aligned_cols=102 Identities=28% Similarity=0.527 Sum_probs=93.3
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeee---cCCCCe
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFS---FHSAPA 82 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~---~~~~~v 82 (131)
..++++|+.-|.|++.|+. ++....+.+|.+.|..+.++| +.+++++++.|.++++|++++..++..+. +|++.|
T Consensus 105 ~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeV 184 (385)
T KOG1034|consen 105 NPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEV 184 (385)
T ss_pred CeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcE
Confidence 5688889999999999986 788888999999999999999 67899999999999999999999988875 588999
Q ss_pred EEEEEcCCCc-EEEEeCCCcEEEEeCCC
Q psy3840 83 LDVDWQSNTS-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 83 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~ 109 (131)
.++.|++++. +++++.|..+++|++..
T Consensus 185 LSvD~~~~gd~i~ScGmDhslk~W~l~~ 212 (385)
T KOG1034|consen 185 LSVDFSLDGDRIASCGMDHSLKLWRLNV 212 (385)
T ss_pred EEEEEcCCCCeeeccCCcceEEEEecCh
Confidence 9999999976 99999999999999984
No 94
>KOG0300|consensus
Probab=99.76 E-value=1.8e-17 Score=102.69 Aligned_cols=114 Identities=20% Similarity=0.347 Sum_probs=101.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc-ceeeeeecCCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG-QCEQQFSFHSAP 81 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~-~~~~~~~~~~~~ 81 (131)
|-..++.+++++.|.+..+||++ +..+..+.+|+...+.+.-+|..+++++.+.|.+.++||++.. ..+..|++|...
T Consensus 280 WL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdt 359 (481)
T KOG0300|consen 280 WLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDT 359 (481)
T ss_pred hhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccc
Confidence 44568999999999999999998 8889999999999999999999999999999999999999863 556789999999
Q ss_pred eEEEEEcCCCcEEEEeCCCcEEEEeCCCC-eeeEEEe
Q psy3840 82 ALDVDWQSNTSFASCSTDQHIHVCKLHSD-KPVKSFE 117 (131)
Q Consensus 82 v~~~~~~~~~~~~~~~~d~~i~i~d~~~~-~~~~~~~ 117 (131)
|++..|..+.++++|++|.+|++||+++. .++.++.
T Consensus 360 VTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIR 396 (481)
T KOG0300|consen 360 VTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIR 396 (481)
T ss_pred eeEEEEecCCceeecCCCceEEEeeeccccCcceeee
Confidence 99999999999999999999999999875 3555554
No 95
>KOG1446|consensus
Probab=99.76 E-value=1.9e-16 Score=97.29 Aligned_cols=119 Identities=19% Similarity=0.258 Sum_probs=94.9
Q ss_pred CccccCCCCEEEEEeCCCeEEEEcCC---CCceeecc---cccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeee
Q psy3840 1 MQSSRNNGSFLATGSYDGYARIWTSD---GSLKSTLG---QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ 74 (131)
Q Consensus 1 ~~~~~~~~~~l~~~~~d~~i~~~~~~---~~~~~~~~---~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 74 (131)
+.+|.|+|-++|++...+.|++||++ ..+-.++. ........|.|+|+|+.++.+...+.+++.|.-+|.....
T Consensus 145 i~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~t 224 (311)
T KOG1446|consen 145 IAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKST 224 (311)
T ss_pred ceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeee
Confidence 35788888888888877788888876 22322222 2345678999999999999999999999999999998888
Q ss_pred eecCCCC---eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecc
Q psy3840 75 FSFHSAP---ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 75 ~~~~~~~---v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
+..+... .....|.||++ +++|+.||+|++|+++++..+..+.+.
T Consensus 225 fs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~ 273 (311)
T KOG1446|consen 225 FSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGP 273 (311)
T ss_pred EeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCC
Confidence 7765433 25678899998 678888899999999999999998873
No 96
>KOG4283|consensus
Probab=99.76 E-value=2.6e-17 Score=100.94 Aligned_cols=119 Identities=17% Similarity=0.285 Sum_probs=100.2
Q ss_pred ccccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCC---CCEEEEEeCCCcEEEEECCCcceeeeeecC
Q psy3840 2 QSSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKR---GNYILSAGVDKTTIIWDAASGQCEQQFSFH 78 (131)
Q Consensus 2 ~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 78 (131)
.||+-|..++.+++-|.++++||.+.-........++.|.+-+++|- ..++++|..+..+++.|+.+|.....+.+|
T Consensus 108 ~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGH 187 (397)
T KOG4283|consen 108 IWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGH 187 (397)
T ss_pred EEeeecCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccc
Confidence 46777888999999999999999985444444557788888899993 447888888999999999999999999999
Q ss_pred CCCeEEEEEcCCCc--EEEEeCCCcEEEEeCCCC-eeeEEEeccc
Q psy3840 79 SAPALDVDWQSNTS--FASCSTDQHIHVCKLHSD-KPVKSFEGHT 120 (131)
Q Consensus 79 ~~~v~~~~~~~~~~--~~~~~~d~~i~i~d~~~~-~~~~~~~~~~ 120 (131)
++.|.++.|+|... |++|+.|+.|++||+|.- .+...+..|.
T Consensus 188 r~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn 232 (397)
T KOG4283|consen 188 RDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHN 232 (397)
T ss_pred cCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeeccc
Confidence 99999999999865 799999999999999875 5666666554
No 97
>KOG0267|consensus
Probab=99.76 E-value=2.1e-18 Score=115.53 Aligned_cols=116 Identities=23% Similarity=0.401 Sum_probs=107.2
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
|+|-+.+.+.|+.|+.+.+||.. ..+...+.+|...+..++|+|+|+++++++.|.++++||+..|+....|..|...+
T Consensus 120 f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v 199 (825)
T KOG0267|consen 120 FHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKV 199 (825)
T ss_pred eccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccc
Confidence 89999999999999999999998 78888999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecc
Q psy3840 83 LDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 83 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
..+.|+|... +++|+.|+.+++||+++.+.+......
T Consensus 200 ~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~ 237 (825)
T KOG0267|consen 200 QSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPE 237 (825)
T ss_pred cccccCchhhhhccCCCCceeeeeccceeEEeeccCCc
Confidence 9999999876 789999999999999988777665543
No 98
>KOG0302|consensus
Probab=99.76 E-value=1.2e-17 Score=104.86 Aligned_cols=122 Identities=20% Similarity=0.356 Sum_probs=96.4
Q ss_pred ccC-CCCEEEEEeCCCeEEEEcCC-CC---ceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcc---eeee
Q psy3840 4 SRN-NGSFLATGSYDGYARIWTSD-GS---LKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQ---CEQQ 74 (131)
Q Consensus 4 ~~~-~~~~l~~~~~d~~i~~~~~~-~~---~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~---~~~~ 74 (131)
||| ....+++|.--+.|++|... +. -..-+.+|+..|..++|+| ....+++++.|++|+|||++.++ ++..
T Consensus 219 WSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~ 298 (440)
T KOG0302|consen 219 WSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST 298 (440)
T ss_pred cccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe
Confidence 455 33457788777789999865 21 1123456999999999999 66789999999999999999873 3333
Q ss_pred eecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCC---CeeeEEEecccceEEEE
Q psy3840 75 FSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHS---DKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 75 ~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~---~~~~~~~~~~~~~~~~~ 126 (131)
+.|...|+.+.|+..-. |++|+.||+++|||+|. ++++..++.|..+++++
T Consensus 299 -kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsi 353 (440)
T KOG0302|consen 299 -KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSI 353 (440)
T ss_pred -eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEE
Confidence 66888999999988744 89999999999999986 47889999998888765
No 99
>KOG1273|consensus
Probab=99.75 E-value=5.4e-17 Score=100.25 Aligned_cols=116 Identities=22% Similarity=0.360 Sum_probs=91.1
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.|++.|.++|+|+.||.|-+||+. ...-+.+.+|..+|++++|+++|+.+++++.|..+.+||+..|.++..+.- ..+
T Consensus 30 ~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf-~sp 108 (405)
T KOG1273|consen 30 QFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF-DSP 108 (405)
T ss_pred EeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc-cCc
Confidence 378999999999999999999987 556677889999999999999999999999999999999998876544321 011
Q ss_pred eE-----------------------------------------------EEEEcCCCc-EEEEeCCCcEEEEeCCCCeee
Q psy3840 82 AL-----------------------------------------------DVDWQSNTS-FASCSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 82 v~-----------------------------------------------~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~ 113 (131)
|+ +..|.+.|+ +++|..-|.+.++|..+.+++
T Consensus 109 v~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~v 188 (405)
T KOG1273|consen 109 VWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECV 188 (405)
T ss_pred cceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheee
Confidence 11 112444455 677888888899998888887
Q ss_pred EEEecc
Q psy3840 114 KSFEGH 119 (131)
Q Consensus 114 ~~~~~~ 119 (131)
..++.-
T Consensus 189 as~rit 194 (405)
T KOG1273|consen 189 ASFRIT 194 (405)
T ss_pred eeeeec
Confidence 776543
No 100
>KOG0647|consensus
Probab=99.75 E-value=2.6e-17 Score=100.87 Aligned_cols=123 Identities=19% Similarity=0.330 Sum_probs=98.7
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCC--EEEEEeCCCcEEEEECCCcceeee------
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGN--YILSAGVDKTTIIWDAASGQCEQQ------ 74 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~s~~~d~~i~~~d~~~~~~~~~------ 74 (131)
.|+.+|..+++|+-|+.+++||+....+..+..|.++|..+.|-+... .+++|++|.+++.||.+...++.+
T Consensus 79 ~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeR 158 (347)
T KOG0647|consen 79 CWSDDGSKVFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPER 158 (347)
T ss_pred EEccCCceEEeeccCCceEEEEccCCCeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccce
Confidence 488999999999999999999999778888899999999999988554 899999999999999986432111
Q ss_pred -------------------------------------------------------------------------------e
Q psy3840 75 -------------------------------------------------------------------------------F 75 (131)
Q Consensus 75 -------------------------------------------------------------------------------~ 75 (131)
+
T Consensus 159 vYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtF 238 (347)
T KOG0647|consen 159 VYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTF 238 (347)
T ss_pred eeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeE
Confidence 1
Q ss_pred ecCC---------CCeEEEEEcCC-CcEEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 76 SFHS---------APALDVDWQSN-TSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 76 ~~~~---------~~v~~~~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
+.|+ ..|++++|+|. +.|++.+.||...+||-.....+.+.+.|..++.+
T Consensus 239 kCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItc 298 (347)
T KOG0647|consen 239 KCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITC 298 (347)
T ss_pred EEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccce
Confidence 1222 13678899997 66999999999999998777667766666666544
No 101
>KOG0772|consensus
Probab=99.75 E-value=7.8e-18 Score=109.44 Aligned_cols=114 Identities=24% Similarity=0.375 Sum_probs=85.8
Q ss_pred cccC-CCCEEEEEeCCCeEEEEcCCC--Cceeecc-----cccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcce---
Q psy3840 3 SSRN-NGSFLATGSYDGYARIWTSDG--SLKSTLG-----QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQC--- 71 (131)
Q Consensus 3 ~~~~-~~~~l~~~~~d~~i~~~~~~~--~~~~~~~-----~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~--- 71 (131)
.|+| +.+.+++++.||++++|++.. +....++ +..-+++.++|+|++++++.|..||+|.+|+..+...
T Consensus 275 ~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~ 354 (641)
T KOG0772|consen 275 CWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPV 354 (641)
T ss_pred ccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccc
Confidence 3666 457889999999999999872 2222221 2334778999999999999999999999999754321
Q ss_pred eeeeecCCC--CeEEEEEcCCCc-EEEEeCCCcEEEEeCCCC-eeeEEE
Q psy3840 72 EQQFSFHSA--PALDVDWQSNTS-FASCSTDQHIHVCKLHSD-KPVKSF 116 (131)
Q Consensus 72 ~~~~~~~~~--~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~-~~~~~~ 116 (131)
...-..|.. .++++.|+++|+ |++-+.|+.+++||++.. +++.+.
T Consensus 355 ~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~ 403 (641)
T KOG0772|consen 355 MKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVR 403 (641)
T ss_pred eEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhh
Confidence 222234544 799999999987 899999999999999875 455443
No 102
>KOG0641|consensus
Probab=99.73 E-value=3e-16 Score=93.47 Aligned_cols=123 Identities=23% Similarity=0.334 Sum_probs=95.1
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-------C----------------------------------------------Cc
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-------G----------------------------------------------SL 29 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-------~----------------------------------------------~~ 29 (131)
+|+|+|+++++|++|.+|++...+ | ..
T Consensus 96 ~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~ 175 (350)
T KOG0641|consen 96 AWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQG 175 (350)
T ss_pred EecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCc
Confidence 689999999999999998876433 1 12
Q ss_pred eeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeec-------CCCCeEEEEEcCCCc-EEEEeCCCc
Q psy3840 30 KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF-------HSAPALDVDWQSNTS-FASCSTDQH 101 (131)
Q Consensus 30 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~-------~~~~v~~~~~~~~~~-~~~~~~d~~ 101 (131)
...+.+|++.|.++ ++-++-.+++|+.|.+|++||++-..++..+.. ....|.+++..|.|+ +++|-.|..
T Consensus 176 ~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dss 254 (350)
T KOG0641|consen 176 FHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSS 254 (350)
T ss_pred ceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCc
Confidence 22344456655554 233577888999999999999998887776542 125688999999998 788889999
Q ss_pred EEEEeCCCCeeeEEEecccceEEEE
Q psy3840 102 IHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 102 i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
..+||++.++.++.+.+|...+.++
T Consensus 255 c~lydirg~r~iq~f~phsadir~v 279 (350)
T KOG0641|consen 255 CMLYDIRGGRMIQRFHPHSADIRCV 279 (350)
T ss_pred eEEEEeeCCceeeeeCCCccceeEE
Confidence 9999999999999999998876543
No 103
>KOG0639|consensus
Probab=99.73 E-value=6.3e-18 Score=109.83 Aligned_cols=114 Identities=18% Similarity=0.275 Sum_probs=98.4
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC--CC-ceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD--GS-LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~--~~-~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (131)
..|||+.|++|+.-.++.|||+. .. ....+......+..++.+||.+..+++..||.|.+||+.+...++.+++|.+
T Consensus 473 L~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtD 552 (705)
T KOG0639|consen 473 LLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 552 (705)
T ss_pred ecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCC
Confidence 46899999999998899999986 22 2223333345678899999999999999999999999999999999999999
Q ss_pred CeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 81 PALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
.+.+|..+++|. |-+|+-|++|+-||+++++.++...
T Consensus 553 GascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd 590 (705)
T KOG0639|consen 553 GASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD 590 (705)
T ss_pred CceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh
Confidence 999999999986 9999999999999999987766543
No 104
>KOG1446|consensus
Probab=99.73 E-value=5e-16 Score=95.45 Aligned_cols=114 Identities=18% Similarity=0.208 Sum_probs=99.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeC--CCcEEEEECCCcceeeeeecCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGV--DKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~--d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
.|+++|+.+++++.|.++++||.. ++.+.++..+...+..++|....+.++.++. |.+|++.++.+.+.++-+.+|.
T Consensus 21 ~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~ 100 (311)
T KOG1446|consen 21 DFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHK 100 (311)
T ss_pred EecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCC
Confidence 478999999999999999999976 8888888888778889999877776666655 8899999999999999999999
Q ss_pred CCeEEEEEcCCC-cEEEEeCCCcEEEEeCCCCeeeEEE
Q psy3840 80 APALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 80 ~~v~~~~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~ 116 (131)
..|.+++.+|-+ .+++++.|++|++||+|..++...+
T Consensus 101 ~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l 138 (311)
T KOG1446|consen 101 KRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLL 138 (311)
T ss_pred ceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEE
Confidence 999999999965 4999999999999999976654444
No 105
>KOG0301|consensus
Probab=99.73 E-value=5.5e-17 Score=108.30 Aligned_cols=113 Identities=27% Similarity=0.458 Sum_probs=103.0
Q ss_pred EEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcC
Q psy3840 10 FLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQS 89 (131)
Q Consensus 10 ~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 89 (131)
.+++|+.|.++++|.. ++....+.+|+..|++++.-|++ .+++|+.|.+|++|.- ++.++++.+|.+.|..+++-+
T Consensus 114 ~~iSgSWD~TakvW~~-~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~ 189 (745)
T KOG0301|consen 114 TLISGSWDSTAKVWRI-GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLD 189 (745)
T ss_pred ceEecccccceEEecc-hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEec
Confidence 3899999999999986 55666689999999999999987 8899999999999986 778899999999999999999
Q ss_pred CCcEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEEe
Q psy3840 90 NTSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLAM 127 (131)
Q Consensus 90 ~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 127 (131)
++.+++++.||.|+.|++ +++.+..+.+|...++++.
T Consensus 190 ~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis 226 (745)
T KOG0301|consen 190 DSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSIS 226 (745)
T ss_pred CCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEE
Confidence 988999999999999999 7999999999999887765
No 106
>KOG0308|consensus
Probab=99.72 E-value=2.1e-16 Score=105.05 Aligned_cols=106 Identities=22% Similarity=0.348 Sum_probs=98.2
Q ss_pred cCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeE
Q psy3840 5 RNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 83 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~ 83 (131)
++.|..+++|+..+.+++||.. .+.+..+.+|++.|..+..+++|..+++++.||+|++||+...+++.++..|...++
T Consensus 180 N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VW 259 (735)
T KOG0308|consen 180 NQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVW 259 (735)
T ss_pred CCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceE
Confidence 5667789999999999999987 778888999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCC-CcEEEEeCCCcEEEEeCCCC
Q psy3840 84 DVDWQSN-TSFASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 84 ~~~~~~~-~~~~~~~~d~~i~i~d~~~~ 110 (131)
++..+|+ ..+.+|+.|+.|+.=|+++.
T Consensus 260 aL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 260 ALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred EEeeCCCcceEEecCCCCcEEecccCCc
Confidence 9999988 45999999999999999874
No 107
>KOG0646|consensus
Probab=99.72 E-value=1.5e-16 Score=102.01 Aligned_cols=119 Identities=18% Similarity=0.262 Sum_probs=97.2
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC----------CCceeecccccccEEEEEEcCC--CCEEEEEeCCCcEEEEECCCcce
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD----------GSLKSTLGQHKGPIFALKWNKR--GNYILSAGVDKTTIIWDAASGQC 71 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~----------~~~~~~~~~~~~~i~~~~~~~~--~~~~~s~~~d~~i~~~d~~~~~~ 71 (131)
|+-|+..|++|++||.|.+|.+. -++...+..|+-+|+.+...+. ...+++++.|.++++||+..+..
T Consensus 131 fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~L 210 (476)
T KOG0646|consen 131 FSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVL 210 (476)
T ss_pred EeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEecccee
Confidence 67899999999999999999753 3567778889999999998775 45899999999999999987753
Q ss_pred eee---------------------------------------------------------eecCCC--CeEEEEEcCCCc
Q psy3840 72 EQQ---------------------------------------------------------FSFHSA--PALDVDWQSNTS 92 (131)
Q Consensus 72 ~~~---------------------------------------------------------~~~~~~--~v~~~~~~~~~~ 92 (131)
+.+ +.+|.. +|++++.+-|+.
T Consensus 211 Llti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~Dgt 290 (476)
T KOG0646|consen 211 LLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGT 290 (476)
T ss_pred eEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCcc
Confidence 322 123444 899999999988
Q ss_pred -EEEEeCCCcEEEEeCCCCeeeEEEecccce
Q psy3840 93 -FASCSTDQHIHVCKLHSDKPVKSFEGHTRV 122 (131)
Q Consensus 93 -~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 122 (131)
|++|+.||.++|||+.+.++++++....++
T Consensus 291 lLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgp 321 (476)
T KOG0646|consen 291 LLLSGDEDGKVCVWDIYSKQCIRTLQTSKGP 321 (476)
T ss_pred EEEeeCCCCCEEEEecchHHHHHHHhhhccc
Confidence 899999999999999999888877633333
No 108
>KOG0643|consensus
Probab=99.72 E-value=4.1e-16 Score=94.43 Aligned_cols=97 Identities=19% Similarity=0.290 Sum_probs=81.6
Q ss_pred cccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc-eeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCC
Q psy3840 33 LGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ-CEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 33 ~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~ 110 (131)
+..+...++.+-|.|-+..+++|..||.|..||+++++ .+.....|...|+.+.++++.. +++++.|.+-++||.++.
T Consensus 143 I~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl 222 (327)
T KOG0643|consen 143 IPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL 222 (327)
T ss_pred ecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccce
Confidence 33455678889999999999999999999999999985 4555677888999999999976 999999999999999999
Q ss_pred eeeEEEecccceEEEEeee
Q psy3840 111 KPVKSFEGHTRVYYLAMDL 129 (131)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~ 129 (131)
+.+.++.........++.+
T Consensus 223 ~v~Kty~te~PvN~aaisP 241 (327)
T KOG0643|consen 223 EVLKTYTTERPVNTAAISP 241 (327)
T ss_pred eeEEEeeecccccceeccc
Confidence 9999987666555555544
No 109
>KOG0772|consensus
Probab=99.71 E-value=1e-16 Score=104.37 Aligned_cols=117 Identities=20% Similarity=0.319 Sum_probs=90.8
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCC----Cceeecccccc--cEEEEEEcCCCCEEEEEeCCCcEEEEECCCc-ceeeee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDG----SLKSTLGQHKG--PIFALKWNKRGNYILSAGVDKTTIIWDAASG-QCEQQF 75 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~----~~~~~~~~~~~--~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~-~~~~~~ 75 (131)
+|++++..||+|+.||.|.+|+..+ .....-+.|.. .|+|+.|+++|++|++-+.|+++++||++.. +++...
T Consensus 324 ~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~ 403 (641)
T KOG0772|consen 324 AWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVR 403 (641)
T ss_pred ecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhh
Confidence 5899999999999999999999752 12233356776 8999999999999999999999999999975 444443
Q ss_pred ec--CCCCeEEEEEcCCCc-EEEEe------CCCcEEEEeCCCCeeeEEEecc
Q psy3840 76 SF--HSAPALDVDWQSNTS-FASCS------TDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 76 ~~--~~~~v~~~~~~~~~~-~~~~~------~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
.+ ...+-+.++|+|+.+ +++|. ..+.+.+||-.+.+.++.+...
T Consensus 404 tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~ 456 (641)
T KOG0772|consen 404 TGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS 456 (641)
T ss_pred cCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC
Confidence 32 234567789999988 56654 3467999999888887776543
No 110
>KOG1407|consensus
Probab=99.71 E-value=5.1e-16 Score=93.72 Aligned_cols=114 Identities=23% Similarity=0.439 Sum_probs=95.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCC-C--ceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeecC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDG-S--LKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFH 78 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~-~--~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 78 (131)
+|+.+|..+++|+.|+++.+|++.. + ......+|.+.+-.++|+| ....+++++.|.++++||.+.+++.......
T Consensus 27 ~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~ 106 (313)
T KOG1407|consen 27 AWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETK 106 (313)
T ss_pred EEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeecc
Confidence 4788999999999999999999872 2 2234578999999999999 7789999999999999999999998887755
Q ss_pred CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 79 SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
... .-+.|+|++. ++.++.|..|.+.|.++.+.....+
T Consensus 107 ~en-i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~ 145 (313)
T KOG1407|consen 107 GEN-INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ 145 (313)
T ss_pred Ccc-eEEEEcCCCCEEEEecCcccEEEEEecccceeehhc
Confidence 444 4588999876 8899999999999999877666544
No 111
>KOG1332|consensus
Probab=99.71 E-value=3e-16 Score=93.95 Aligned_cols=105 Identities=30% Similarity=0.520 Sum_probs=89.3
Q ss_pred CCCCEEEEEeCCCeEEEEcCC--C--CceeecccccccEEEEEEcC--CCCEEEEEeCCCcEEEEECCCcc--eeeeeec
Q psy3840 6 NNGSFLATGSYDGYARIWTSD--G--SLKSTLGQHKGPIFALKWNK--RGNYILSAGVDKTTIIWDAASGQ--CEQQFSF 77 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~--~--~~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~--~~~~~~~ 77 (131)
-.|.+|++++.|++|+++... + +.+.++.+|.+|++.++|.. -|..+++++.||.+.+|.-.+++ .......
T Consensus 21 yygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~ 100 (299)
T KOG1332|consen 21 YYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAA 100 (299)
T ss_pred hhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhh
Confidence 358899999999999999976 2 67789999999999999954 79999999999999999988763 2334556
Q ss_pred CCCCeEEEEEcCC--Cc-EEEEeCCCcEEEEeCCCC
Q psy3840 78 HSAPALDVDWQSN--TS-FASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 78 ~~~~v~~~~~~~~--~~-~~~~~~d~~i~i~d~~~~ 110 (131)
|...+++++|.|. +. |++++.||.|.|.+.++.
T Consensus 101 h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~ 136 (299)
T KOG1332|consen 101 HSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS 136 (299)
T ss_pred hcccceeecccccccceEEEEeeCCCcEEEEEEcCC
Confidence 8889999999997 44 789999999999988754
No 112
>KOG1036|consensus
Probab=99.71 E-value=9e-16 Score=94.22 Aligned_cols=110 Identities=18% Similarity=0.239 Sum_probs=91.8
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeE
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 83 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~ 83 (131)
|+|.++.|++++.||.+++|++....+.....|..++.+++|.+ ...+++|+.||.++.+|+.+++.. .+..|..++.
T Consensus 21 f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~-~igth~~~i~ 98 (323)
T KOG1036|consen 21 FSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNED-QIGTHDEGIR 98 (323)
T ss_pred EcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccC-CceEEEeccCceEEEEEecCCcce-eeccCCCceE
Confidence 56888899999999999999998555555566899999999986 667899999999999999988753 4556888999
Q ss_pred EEEEcCC-CcEEEEeCCCcEEEEeCCCCeeeEE
Q psy3840 84 DVDWQSN-TSFASCSTDQHIHVCKLHSDKPVKS 115 (131)
Q Consensus 84 ~~~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~ 115 (131)
++.+.+. +.+++|++|+.|++||.+.......
T Consensus 99 ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~ 131 (323)
T KOG1036|consen 99 CIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGT 131 (323)
T ss_pred EEEeeccCCeEEEcccCccEEEEeccccccccc
Confidence 9999986 6699999999999999996444333
No 113
>KOG0299|consensus
Probab=99.71 E-value=2e-16 Score=101.37 Aligned_cols=118 Identities=21% Similarity=0.363 Sum_probs=101.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
+.++|+.+|++|+.|..|.+|+.. .+++..+.+|.+.|.+++|......+++++.|+++++|++.....+.++.+|...
T Consensus 209 avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~ 288 (479)
T KOG0299|consen 209 AVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDG 288 (479)
T ss_pred EEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccc
Confidence 468999999999999999999987 7888889999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCcEE-EEeCCCcEEEEeCCCCeeeEEEecccc
Q psy3840 82 ALDVDWQSNTSFA-SCSTDQHIHVCKLHSDKPVKSFEGHTR 121 (131)
Q Consensus 82 v~~~~~~~~~~~~-~~~~d~~i~i~d~~~~~~~~~~~~~~~ 121 (131)
|..+.-..-.+.+ .|+.|+++++|++..... ..+.++..
T Consensus 289 v~~IdaL~reR~vtVGgrDrT~rlwKi~eesq-lifrg~~~ 328 (479)
T KOG0299|consen 289 VLGIDALSRERCVTVGGRDRTVRLWKIPEESQ-LIFRGGEG 328 (479)
T ss_pred eeeechhcccceEEeccccceeEEEeccccce-eeeeCCCC
Confidence 9999877766754 455999999999954333 33444543
No 114
>KOG0641|consensus
Probab=99.70 E-value=1.9e-15 Score=90.11 Aligned_cols=105 Identities=28% Similarity=0.449 Sum_probs=91.6
Q ss_pred cCCCCEEEEEeCCCeEEEEcCC-CCceeeccc--c-----cccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee
Q psy3840 5 RNNGSFLATGSYDGYARIWTSD-GSLKSTLGQ--H-----KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 76 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~--~-----~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 76 (131)
+=++.++++|++|.+|++||+. ...+.++.. | ...|.+++..|.|+++++|-.|....+||++.++.++.+.
T Consensus 191 swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~ 270 (350)
T KOG0641|consen 191 SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFH 270 (350)
T ss_pred EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeC
Confidence 4468899999999999999987 445544432 2 2568899999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCC
Q psy3840 77 FHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~ 109 (131)
.|...|.++.|+|... +++++.|..|++-|+..
T Consensus 271 phsadir~vrfsp~a~yllt~syd~~ikltdlqg 304 (350)
T KOG0641|consen 271 PHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG 304 (350)
T ss_pred CCccceeEEEeCCCceEEEEecccceEEEeeccc
Confidence 9999999999999976 89999999999999863
No 115
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.70 E-value=2.9e-15 Score=89.54 Aligned_cols=110 Identities=19% Similarity=0.386 Sum_probs=85.5
Q ss_pred cccCCCCEEEEE--eCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC---CCcEEEEECCCcceeeeeec
Q psy3840 3 SSRNNGSFLATG--SYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV---DKTTIIWDAASGQCEQQFSF 77 (131)
Q Consensus 3 ~~~~~~~~l~~~--~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~---d~~i~~~d~~~~~~~~~~~~ 77 (131)
+|+|+++.+++. ..+..|.+||++++.+..+. ...+..+.|+|+|++++.++. .|.+.+||.++.+.+.....
T Consensus 66 ~WsP~g~~favi~g~~~~~v~lyd~~~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~ 143 (194)
T PF08662_consen 66 AWSPNGNEFAVIYGSMPAKVTLYDVKGKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEH 143 (194)
T ss_pred EECcCCCEEEEEEccCCcccEEEcCcccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeecccc
Confidence 589999987665 34678999999877776664 456788999999999999874 46799999998888766553
Q ss_pred CCCCeEEEEEcCCCc-EEEEeC------CCcEEEEeCCCCeeeEEEe
Q psy3840 78 HSAPALDVDWQSNTS-FASCST------DQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 78 ~~~~v~~~~~~~~~~-~~~~~~------d~~i~i~d~~~~~~~~~~~ 117 (131)
..+..++|+|+|+ ++++.. |+.++||+.. |+.+....
T Consensus 144 --~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~~~ 187 (194)
T PF08662_consen 144 --SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYKKP 187 (194)
T ss_pred --CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEecc
Confidence 3578999999998 666553 6788999985 76666543
No 116
>KOG0301|consensus
Probab=99.70 E-value=1.1e-15 Score=102.30 Aligned_cols=112 Identities=21% Similarity=0.279 Sum_probs=95.5
Q ss_pred EEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcC
Q psy3840 10 FLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQS 89 (131)
Q Consensus 10 ~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 89 (131)
.+++|+.|.+|++|.- ++.+.++.+|++.|+.+++-++. .+++++.||.|++|++ +++++..+.+|..-+.++....
T Consensus 153 ~~vTgsaDKtIklWk~-~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~ 229 (745)
T KOG0301|consen 153 TYVTGSADKTIKLWKG-GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMAL 229 (745)
T ss_pred cEEeccCcceeeeccC-CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecC
Confidence 8999999999999996 88889999999999999998754 4799999999999998 8889999999999999999555
Q ss_pred C-CcEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 90 N-TSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 90 ~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
+ +.+++++.|++++||+.. ++.+.+..+...+..+
T Consensus 230 ~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa 265 (745)
T KOG0301|consen 230 SDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSA 265 (745)
T ss_pred CCCeEEEecCCceEEEeecC--ceEEEEecCccceEEE
Confidence 4 559999999999999876 6777766555444443
No 117
>KOG1009|consensus
Probab=99.70 E-value=3.8e-16 Score=98.88 Aligned_cols=117 Identities=20% Similarity=0.394 Sum_probs=98.1
Q ss_pred CEEEEEeCCCeEEEEcCC----CC------ceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECC--------C--
Q psy3840 9 SFLATGSYDGYARIWTSD----GS------LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA--------S-- 68 (131)
Q Consensus 9 ~~l~~~~~d~~i~~~~~~----~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~--------~-- 68 (131)
+++++|+.|..|++|-++ ++ ....+..|+..+.++.|+|+|..+++|+.+|.+.+|-.. +
T Consensus 27 ~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~ 106 (434)
T KOG1009|consen 27 NKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEA 106 (434)
T ss_pred cceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchh
Confidence 399999999999999765 21 234567799999999999999999999999999999765 2
Q ss_pred ------cceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 69 ------GQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 69 ------~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
......+.+|...+..++|+|++. +++++-|+.+++||+..|+.+.....|...+..
T Consensus 107 ~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqg 170 (434)
T KOG1009|consen 107 DLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQG 170 (434)
T ss_pred hhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccce
Confidence 122345567888999999999988 889999999999999999999999888876643
No 118
>KOG2394|consensus
Probab=99.68 E-value=2.8e-16 Score=102.72 Aligned_cols=86 Identities=24% Similarity=0.425 Sum_probs=77.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
+|+|||++||+.++||.+||||.. .+.+...+..-+...|++|+|||+++++|+.|.-+.+|.+...+.+..-++|+.-
T Consensus 297 ~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSW 376 (636)
T KOG2394|consen 297 AFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSW 376 (636)
T ss_pred eEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccc
Confidence 589999999999999999999987 4444555666678999999999999999999999999999999999998899999
Q ss_pred eEEEEEc
Q psy3840 82 ALDVDWQ 88 (131)
Q Consensus 82 v~~~~~~ 88 (131)
|..++|+
T Consensus 377 Vs~VaFD 383 (636)
T KOG2394|consen 377 VSVVAFD 383 (636)
T ss_pred eeeEeec
Confidence 9999987
No 119
>KOG1539|consensus
Probab=99.68 E-value=4.2e-15 Score=101.27 Aligned_cols=121 Identities=19% Similarity=0.282 Sum_probs=100.1
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeec---ccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCccee-------
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTL---GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE------- 72 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~---~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~------- 72 (131)
.++-|++.+.|...|.|.+||++ |-....+ ..|.++|+.++.+.-++.+++++.+|.+++||..+...+
T Consensus 456 vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~ 535 (910)
T KOG1539|consen 456 VSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGS 535 (910)
T ss_pred EeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCC
Confidence 46779999999999999999998 4444444 479999999999999999999999999999999865421
Q ss_pred ----------------------------------eeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 73 ----------------------------------QQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 73 ----------------------------------~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
+.+.+|...+++++|+|||+ +++++-|++|++||+.++.++-.+.
T Consensus 536 ~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~ 615 (910)
T KOG1539|consen 536 SITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL 615 (910)
T ss_pred CcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe
Confidence 22346789999999999999 8999999999999999998887765
Q ss_pred cccceEE
Q psy3840 118 GHTRVYY 124 (131)
Q Consensus 118 ~~~~~~~ 124 (131)
-......
T Consensus 616 vd~~~~s 622 (910)
T KOG1539|consen 616 VDSPCTS 622 (910)
T ss_pred cCCccee
Confidence 4444333
No 120
>KOG0299|consensus
Probab=99.68 E-value=2.8e-16 Score=100.73 Aligned_cols=124 Identities=20% Similarity=0.298 Sum_probs=106.5
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCce-----------------eec-ccccccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLK-----------------STL-GQHKGPIFALKWNKRGNYILSAGVDKTTII 63 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~-----------------~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~ 63 (131)
+++|+..+.++++.+++|.-|++. ++.. ... ..|...+.+++.+++++++++|+.|..+.+
T Consensus 149 als~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~d~~v~I 228 (479)
T KOG0299|consen 149 ALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGRDRHVQI 228 (479)
T ss_pred EeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCCCceEEE
Confidence 368899999999999999999865 2211 111 267888999999999999999999999999
Q ss_pred EECCCcceeeeeecCCCCeEEEEEcCCC-cEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 64 WDAASGQCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 64 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
|+.++.+.+..+.+|.+.|.+++|-... .+++++.|+.+++|++.....+.++.+|+..+..+
T Consensus 229 w~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~I 292 (479)
T KOG0299|consen 229 WDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGI 292 (479)
T ss_pred ecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeee
Confidence 9999999999999999999999997664 49999999999999999888888888888877554
No 121
>KOG0293|consensus
Probab=99.68 E-value=1.7e-15 Score=96.57 Aligned_cols=125 Identities=18% Similarity=0.266 Sum_probs=103.2
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
+.++||.++++.+.|..|++|+.+...-..+..-..+|++...+.+++++++.-.+..+++||+++.+.++.+.+|+..-
T Consensus 361 ait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~ 440 (519)
T KOG0293|consen 361 AITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGH 440 (519)
T ss_pred EEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccc
Confidence 35789999999999999999998743333344455689999999999999999999999999999999999999887654
Q ss_pred EEE--EEcC-C-CcEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEEe
Q psy3840 83 LDV--DWQS-N-TSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLAM 127 (131)
Q Consensus 83 ~~~--~~~~-~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 127 (131)
.-+ +|.. + ..+++|+.|++|+||+.++++++.++.+|...++++.
T Consensus 441 fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVs 489 (519)
T KOG0293|consen 441 FIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVS 489 (519)
T ss_pred eEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEe
Confidence 433 3433 2 2389999999999999999999999999999887764
No 122
>KOG0294|consensus
Probab=99.66 E-value=5.6e-15 Score=91.25 Aligned_cols=115 Identities=22% Similarity=0.233 Sum_probs=97.5
Q ss_pred EEEEEeCCCeEEEEcCCC-------------CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee
Q psy3840 10 FLATGSYDGYARIWTSDG-------------SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 76 (131)
Q Consensus 10 ~l~~~~~d~~i~~~~~~~-------------~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 76 (131)
.|++|+....|.-+++.- .+...+..|.+.+++++.+ +.++++|+.|.+|++||+++...+..+-
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll 80 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILL 80 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhccee
Confidence 477888887777666541 1245567799999999984 8999999999999999999999999999
Q ss_pred cCCCCeEEEEEcCCC---cEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 77 FHSAPALDVDWQSNT---SFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~---~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
.|.+.++++.|.++. .|++|+.||.|.+|+....+++.++++|...++.+
T Consensus 81 ~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~l 133 (362)
T KOG0294|consen 81 SHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDL 133 (362)
T ss_pred ccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeeccccccccee
Confidence 999999999998873 59999999999999999999999999998776543
No 123
>KOG4283|consensus
Probab=99.66 E-value=1.7e-15 Score=93.08 Aligned_cols=105 Identities=25% Similarity=0.531 Sum_probs=88.1
Q ss_pred CCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCE-EEEEeCCCcEEEEECCCc-ceee----------
Q psy3840 7 NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNY-ILSAGVDKTTIIWDAASG-QCEQ---------- 73 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~-~~s~~~d~~i~~~d~~~~-~~~~---------- 73 (131)
...++|+|..+-.|++.|+. |...+.+.+|.+.|.++.|+|...+ +++|+.||.+++||++.- -+..
T Consensus 157 sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~ 236 (397)
T KOG4283|consen 157 SHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRP 236 (397)
T ss_pred cceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccC
Confidence 35688899889999999987 8889999999999999999997765 668899999999999853 2222
Q ss_pred ----eeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCe
Q psy3840 74 ----QFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 74 ----~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~ 111 (131)
.-..|.+.+..++|..++. +++++.|..+++|+..+|+
T Consensus 237 p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 237 PILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred ccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence 2235667899999999987 8999999999999988764
No 124
>KOG0270|consensus
Probab=99.65 E-value=1.5e-15 Score=97.03 Aligned_cols=103 Identities=27% Similarity=0.535 Sum_probs=87.1
Q ss_pred CCCEEEEEeCCCeEEEEcCC-----------CCce-----------eecccccccEEEEEEcC-CCCEEEEEeCCCcEEE
Q psy3840 7 NGSFLATGSYDGYARIWTSD-----------GSLK-----------STLGQHKGPIFALKWNK-RGNYILSAGVDKTTII 63 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-----------~~~~-----------~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~ 63 (131)
.|+++|.|+-+..|.|||+. |... ..-.+|++.+..|.|+. -.+.++||+.|.++++
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l 270 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL 270 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence 47899999999999999975 1100 11235888888999888 4568899999999999
Q ss_pred EECCCcceeeeeecCCCCeEEEEEcCC-Cc-EEEEeCCCcEEEEeCCC
Q psy3840 64 WDAASGQCEQQFSFHSAPALDVDWQSN-TS-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 64 ~d~~~~~~~~~~~~~~~~v~~~~~~~~-~~-~~~~~~d~~i~i~d~~~ 109 (131)
||+.++++..++..|...|.++.|+|. .. +++|+.|+++.+.|.|.
T Consensus 271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 999999999999999999999999996 44 89999999999999993
No 125
>KOG0649|consensus
Probab=99.65 E-value=2.2e-14 Score=86.27 Aligned_cols=112 Identities=15% Similarity=0.209 Sum_probs=86.9
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC-
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP- 81 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~- 81 (131)
..|..+-++.++.|+.++-||++ |+..+++++|++.+.++.-......+++|+.||++++||+++++.+..+.....+
T Consensus 122 ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~ 201 (325)
T KOG0649|consen 122 LDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPN 201 (325)
T ss_pred eccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChh
Confidence 34555556666689999999998 8888999999999999998677778999999999999999999988777532211
Q ss_pred ---------eEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 82 ---------ALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 82 ---------v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
+-+++ -+...+.++....+.+|++++.++...+.
T Consensus 202 ~lRp~~g~wigala--~~edWlvCGgGp~lslwhLrsse~t~vfp 244 (325)
T KOG0649|consen 202 LLRPDWGKWIGALA--VNEDWLVCGGGPKLSLWHLRSSESTCVFP 244 (325)
T ss_pred hcCcccCceeEEEe--ccCceEEecCCCceeEEeccCCCceEEEe
Confidence 22332 23346667777899999999988777664
No 126
>KOG0278|consensus
Probab=99.65 E-value=5.4e-15 Score=89.10 Aligned_cols=108 Identities=17% Similarity=0.294 Sum_probs=81.6
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeee-ecCCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF-SFHSAP 81 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~-~~~~~~ 81 (131)
++++|++|.++ ..+.|.+||.. .+.++.+ .....|.+...+|+-..++.|+.|..++-||..+++.+..+ ++|.++
T Consensus 192 vs~dG~ilTia-~gssV~Fwdaksf~~lKs~-k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gp 269 (334)
T KOG0278|consen 192 VSQDGRILTIA-YGSSVKFWDAKSFGLLKSY-KMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGP 269 (334)
T ss_pred eccCCCEEEEe-cCceeEEeccccccceeec-cCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCc
Confidence 34555555554 23456666654 2222222 23456777788898899999999999999999999998886 789999
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeee
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~ 113 (131)
|.++.|+|+|. .++|+.||+|++|....++..
T Consensus 270 VhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 270 VHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred eEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 99999999998 799999999999998766543
No 127
>KOG2394|consensus
Probab=99.65 E-value=3.8e-15 Score=97.54 Aligned_cols=123 Identities=15% Similarity=0.205 Sum_probs=99.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC---C--------------------------CceeecccccccEEEEEEcCCCCEEE
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD---G--------------------------SLKSTLGQHKGPIFALKWNKRGNYIL 53 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~---~--------------------------~~~~~~~~~~~~i~~~~~~~~~~~~~ 53 (131)
|..-+...++++-.+|.+.+||.. + .++.......+.|...+|+|||++++
T Consensus 227 Wvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA 306 (636)
T KOG2394|consen 227 WVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLA 306 (636)
T ss_pred EEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEE
Confidence 444456677777789999999654 0 01111111345778899999999999
Q ss_pred EEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 54 SAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 54 s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
+.+.||.+++||..+.+.+..++..-+...|++|+||++ +++|+.|.-|.||.+...+.+..-++|..-|..
T Consensus 307 ~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~ 379 (636)
T KOG2394|consen 307 TVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSV 379 (636)
T ss_pred EEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceee
Confidence 999999999999999988888777778899999999999 899999999999999999999999999886643
No 128
>KOG0639|consensus
Probab=99.63 E-value=2.2e-15 Score=98.29 Aligned_cols=117 Identities=16% Similarity=0.272 Sum_probs=98.7
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
+.+||.+..++++.||.|.+||+. ...++.+++|++.+.|+.++++|..+-+|+-|.+++.||+++++.+.... ....
T Consensus 516 a~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQ 594 (705)
T KOG0639|consen 516 AISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQ 594 (705)
T ss_pred hcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh-hhhh
Confidence 568999999999999999999997 66788999999999999999999999999999999999999998766544 4568
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccc
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTR 121 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 121 (131)
|.++-++|++. ++.|..++.+.+......+. ..+..|..
T Consensus 595 IfSLg~cP~~dWlavGMens~vevlh~skp~k-yqlhlheS 634 (705)
T KOG0639|consen 595 IFSLGYCPTGDWLAVGMENSNVEVLHTSKPEK-YQLHLHES 634 (705)
T ss_pred heecccCCCccceeeecccCcEEEEecCCccc-eeeccccc
Confidence 99999999987 88999999988887664433 33333443
No 129
>KOG4378|consensus
Probab=99.63 E-value=1.1e-14 Score=94.92 Aligned_cols=122 Identities=17% Similarity=0.276 Sum_probs=99.1
Q ss_pred ccCCC-CEEEEEeCCCeEEEEcCCCC-c-eeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeecCC
Q psy3840 4 SRNNG-SFLATGSYDGYARIWTSDGS-L-KSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 4 ~~~~~-~~l~~~~~d~~i~~~~~~~~-~-~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
|++.. ..|.+++++|.|.+||+.+. + ..-...|..+...++|+| +..++++.+.|..|.+||.+..+....+.. .
T Consensus 172 ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y-~ 250 (673)
T KOG4378|consen 172 YSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTY-S 250 (673)
T ss_pred cccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeee-c
Confidence 45544 45567889999999999843 3 344567999999999999 677888999999999999998777666654 4
Q ss_pred CCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCC-eeeEEEecccceEEEE
Q psy3840 80 APALDVDWQSNTS-FASCSTDQHIHVCKLHSD-KPVKSFEGHTRVYYLA 126 (131)
Q Consensus 80 ~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~ 126 (131)
.+...++|.++|. |+.|...|.|..||+|.. .++.++..|...+.++
T Consensus 251 ~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~v 299 (673)
T KOG4378|consen 251 HPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRV 299 (673)
T ss_pred CCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEE
Confidence 6889999999988 788889999999999965 6788888888776543
No 130
>KOG0642|consensus
Probab=99.62 E-value=9.4e-15 Score=95.87 Aligned_cols=111 Identities=21% Similarity=0.347 Sum_probs=95.0
Q ss_pred ccccCCCCEEEEEeCCCeEEEEcCC---------CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc---
Q psy3840 2 QSSRNNGSFLATGSYDGYARIWTSD---------GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG--- 69 (131)
Q Consensus 2 ~~~~~~~~~l~~~~~d~~i~~~~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~--- 69 (131)
.+|++...-|++++.||++.+|+++ -+++.++.+|.++|.|++..+++..+++|+.||+|+.|++...
T Consensus 300 l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp 379 (577)
T KOG0642|consen 300 LAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDP 379 (577)
T ss_pred hhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCc
Confidence 3577888999999999999999983 3567889999999999999999999999999999999976521
Q ss_pred -------ceeeeeecCCCCeEEEEEcCCC-cEEEEeCCCcEEEEeCCCCee
Q psy3840 70 -------QCEQQFSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLHSDKP 112 (131)
Q Consensus 70 -------~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~i~d~~~~~~ 112 (131)
.....+.+|.+.++.+++++.. +|++++.||+++.|+.....+
T Consensus 380 ~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~ 430 (577)
T KOG0642|consen 380 DDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP 430 (577)
T ss_pred ccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc
Confidence 2235577899999999999874 499999999999999876655
No 131
>KOG0288|consensus
Probab=99.62 E-value=1.7e-15 Score=96.20 Aligned_cols=116 Identities=20% Similarity=0.310 Sum_probs=96.4
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
|.+++..++++++|+.+++|++. .....++.+|++.|+++.|......+++|+.|.++++||+.+..+..+... ...+
T Consensus 227 ~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~-~S~c 305 (459)
T KOG0288|consen 227 FDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP-GSQC 305 (459)
T ss_pred ecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccc-cccc
Confidence 56788899999999999999997 777889999999999999988777799999999999999999887766543 3445
Q ss_pred EEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEecccc
Q psy3840 83 LDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTR 121 (131)
Q Consensus 83 ~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 121 (131)
..|... ...++++-.|++|++||.++..+..+...+..
T Consensus 306 nDI~~~-~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~ 343 (459)
T KOG0288|consen 306 NDIVCS-ISDVISGHFDKKVRFWDIRSADKTRSVPLGGR 343 (459)
T ss_pred cceEec-ceeeeecccccceEEEeccCCceeeEeecCcc
Confidence 555554 22378888899999999999999888877763
No 132
>KOG0771|consensus
Probab=99.62 E-value=1.7e-14 Score=91.69 Aligned_cols=121 Identities=20% Similarity=0.290 Sum_probs=97.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEc-CCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeee------
Q psy3840 3 SSRNNGSFLATGSYDGYARIWT-SDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF------ 75 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~------ 75 (131)
+++.+|..+++|+.||.+|+|+ .+...+.....|...|.++.|+||++.+++.+.| ..++|+.+++..+...
T Consensus 151 af~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~ 229 (398)
T KOG0771|consen 151 AFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKD 229 (398)
T ss_pred EEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccc
Confidence 5788999999999999999999 4466667778899999999999999999999999 8999999877211100
Q ss_pred -------------------------------------e-----------cCCCCeEEEEEcCCCc-EEEEeCCCcEEEEe
Q psy3840 76 -------------------------------------S-----------FHSAPALDVDWQSNTS-FASCSTDQHIHVCK 106 (131)
Q Consensus 76 -------------------------------------~-----------~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d 106 (131)
. .....+.+++.+++|+ ++.|+-||.|.|++
T Consensus 230 ~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~ 309 (398)
T KOG0771|consen 230 EMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYD 309 (398)
T ss_pred hhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEE
Confidence 0 0123688999999999 78899999999999
Q ss_pred CCCCeeeEEE-ecccceEE
Q psy3840 107 LHSDKPVKSF-EGHTRVYY 124 (131)
Q Consensus 107 ~~~~~~~~~~-~~~~~~~~ 124 (131)
..+.+.++.. +.|...++
T Consensus 310 ~~~lq~~~~vk~aH~~~VT 328 (398)
T KOG0771|consen 310 AKSLQRLQYVKEAHLGFVT 328 (398)
T ss_pred eceeeeeEeehhhheeeee
Confidence 9988877765 45665443
No 133
>KOG0290|consensus
Probab=99.62 E-value=1.8e-14 Score=88.40 Aligned_cols=105 Identities=18% Similarity=0.350 Sum_probs=86.2
Q ss_pred cCCCCEEEEEeCCCeEEEEcCCC----CceeecccccccEEEEEEcCCC-CEEEEEeCCCcEEEEECCCcc---------
Q psy3840 5 RNNGSFLATGSYDGYARIWTSDG----SLKSTLGQHKGPIFALKWNKRG-NYILSAGVDKTTIIWDAASGQ--------- 70 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~--------- 70 (131)
--+.++|.+.+-|.+..+||++. .....+..|...|..++|...+ ..+++.+.||++++||++.-+
T Consensus 160 e~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p 239 (364)
T KOG0290|consen 160 EVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDP 239 (364)
T ss_pred cCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCC
Confidence 34678999999999999999872 2355678899999999999854 578899999999999998532
Q ss_pred ---------------------------------------eeeeeecCCCCeEEEEEcCCC--cEEEEeCCCcEEEEeCCC
Q psy3840 71 ---------------------------------------CEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHS 109 (131)
Q Consensus 71 ---------------------------------------~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~i~i~d~~~ 109 (131)
.+..++.|...|+.++|.|.. .+.++++|..+.+||+.+
T Consensus 240 ~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 240 SPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred CCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 122345788899999999974 399999999999999964
No 134
>KOG0300|consensus
Probab=99.62 E-value=3e-15 Score=93.03 Aligned_cols=119 Identities=25% Similarity=0.401 Sum_probs=100.8
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEEC------CCc-----------
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA------ASG----------- 69 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~------~~~----------- 69 (131)
...+.+++.|.+.++|.++ +.++..+.+|.+.|.+++|++.+.++++++.|++..||.. ...
T Consensus 160 qpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE 239 (481)
T KOG0300|consen 160 QPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEE 239 (481)
T ss_pred CcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhh
Confidence 4578889999999999998 9999999999999999999999999999999999999962 110
Q ss_pred -----------------------ceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 70 -----------------------QCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 70 -----------------------~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
.++..+.+|...|.+..|-..++ +++++.|++..+||+++++.+..+.+|....+.
T Consensus 240 ~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtH 319 (481)
T KOG0300|consen 240 EEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTH 319 (481)
T ss_pred hhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccc
Confidence 02344567777888888887766 899999999999999999999999998876554
Q ss_pred E
Q psy3840 126 A 126 (131)
Q Consensus 126 ~ 126 (131)
+
T Consensus 320 c 320 (481)
T KOG0300|consen 320 C 320 (481)
T ss_pred c
Confidence 3
No 135
>KOG0268|consensus
Probab=99.62 E-value=1.3e-15 Score=95.53 Aligned_cols=111 Identities=12% Similarity=0.188 Sum_probs=95.2
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC-C
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH-S 79 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~-~ 79 (131)
+|+|.+-.+.+|+.|..+..||.. ..++....+|...|..++|+|.|+-+++|+.|.+|+||..+.+.....+... -
T Consensus 236 swnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRM 315 (433)
T KOG0268|consen 236 CWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRM 315 (433)
T ss_pred ecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhh
Confidence 588988888999999999999987 7888889999999999999999999999999999999999887655444332 2
Q ss_pred CCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeee
Q psy3840 80 APALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 80 ~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~ 113 (131)
..|.++.|+-|.+ +++|++|+.|++|.-+..+.+
T Consensus 316 q~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asekl 350 (433)
T KOG0268|consen 316 QHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKL 350 (433)
T ss_pred heeeEEEEeccccEEEecCCCcceeeeecchhhhc
Confidence 4689999999988 889999999999987654443
No 136
>KOG1408|consensus
Probab=99.61 E-value=1.6e-14 Score=97.72 Aligned_cols=106 Identities=25% Similarity=0.354 Sum_probs=96.8
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeeccc---ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQ---HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~---~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
..|+..++++++.|..|++|+++ ++.++.+++ |++....+..+|.|.++++...|.++.++|.-+++++..+.+|.
T Consensus 604 Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHs 683 (1080)
T KOG1408|consen 604 VDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHS 683 (1080)
T ss_pred eCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcc
Confidence 45778999999999999999998 788877765 66778888999999999999999999999999999999999999
Q ss_pred CCeEEEEEcCCCc-EEEEeCCCcEEEEeCCC
Q psy3840 80 APALDVDWQSNTS-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 80 ~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~ 109 (131)
..|+.+.|.+|.+ |++.+.||.|.||.+..
T Consensus 684 E~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 684 EAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred hheeeeeecccchhheeecCCceEEEEECch
Confidence 9999999999976 99999999999998753
No 137
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.61 E-value=1.6e-13 Score=86.50 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=86.8
Q ss_pred cccCCCCEEEEEe-CCCeEEEEcCC-CCceeeccccc-----c--cEEEEEEcCCCCEEEEE-eCCCcEEEEECCCccee
Q psy3840 3 SSRNNGSFLATGS-YDGYARIWTSD-GSLKSTLGQHK-----G--PIFALKWNKRGNYILSA-GVDKTTIIWDAASGQCE 72 (131)
Q Consensus 3 ~~~~~~~~l~~~~-~d~~i~~~~~~-~~~~~~~~~~~-----~--~i~~~~~~~~~~~~~s~-~~d~~i~~~d~~~~~~~ 72 (131)
+|+++++.+++++ .++.|++||+. ++.+..+..+. . ....++|+|+++.++.+ ..++.+.+||+++++..
T Consensus 163 ~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~ 242 (300)
T TIGR03866 163 EFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVL 242 (300)
T ss_pred EECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEE
Confidence 4788999886554 58999999987 44434332211 1 23467899999985544 45678999999988876
Q ss_pred eeeecCCCCeEEEEEcCCCc-EEEE-eCCCcEEEEeCCCCeeeEEEecccce
Q psy3840 73 QQFSFHSAPALDVDWQSNTS-FASC-STDQHIHVCKLHSDKPVKSFEGHTRV 122 (131)
Q Consensus 73 ~~~~~~~~~v~~~~~~~~~~-~~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~ 122 (131)
..+. ....+.+++|+|++. ++++ ..++.|.+||+++++.+..+.....+
T Consensus 243 ~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 293 (300)
T TIGR03866 243 DYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVGRLP 293 (300)
T ss_pred EEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEccccc
Confidence 6554 345788999999987 6554 46899999999999999888765544
No 138
>KOG1273|consensus
Probab=99.61 E-value=9e-15 Score=90.60 Aligned_cols=78 Identities=18% Similarity=0.356 Sum_probs=72.5
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 40 IFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 40 i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
..|+.|++.|.++++|..+|.+.+||+.+...-+.+.+|..+|++++|+++|+ |++++.|..|.+||+..|.++..+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE
Confidence 68899999999999999999999999999887788889999999999999988 8999999999999999998887764
No 139
>KOG1274|consensus
Probab=99.60 E-value=3.5e-14 Score=97.63 Aligned_cols=116 Identities=20% Similarity=0.372 Sum_probs=99.4
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeec----
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF---- 77 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~---- 77 (131)
+++-+|++++.|+.|-.|++-+.. ......+++|.++|.++.++|+++.+++.+-||.+++||+.++.+...+..
T Consensus 103 ~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~ 182 (933)
T KOG1274|consen 103 AVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKD 182 (933)
T ss_pred EEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCcc
Confidence 467889999999999999999976 677788999999999999999999999999999999999999876655432
Q ss_pred ----CCCCeEEEEEcCC-CcEEEEeCCCcEEEEeCCCCeeeEEEec
Q psy3840 78 ----HSAPALDVDWQSN-TSFASCSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 78 ----~~~~v~~~~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
....+..++|+|+ ++++....|+.|.+|+...++....+..
T Consensus 183 n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~ 228 (933)
T KOG1274|consen 183 NEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRD 228 (933)
T ss_pred ccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecc
Confidence 1345678899999 5699999999999999988877666643
No 140
>KOG2096|consensus
Probab=99.60 E-value=1.6e-14 Score=89.65 Aligned_cols=103 Identities=15% Similarity=0.352 Sum_probs=89.4
Q ss_pred CCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECC---Cc-----ceeeeeec
Q psy3840 6 NNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA---SG-----QCEQQFSF 77 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~---~~-----~~~~~~~~ 77 (131)
.++.+|++++.|..|.+|++.|+.+..+..........+.+|+|+.+++++--.-+++|.+- .| ..+..+.+
T Consensus 197 ~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkG 276 (420)
T KOG2096|consen 197 GNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKG 276 (420)
T ss_pred CCceEEEEecCCCcEEEEecCCceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheecc
Confidence 45688999999999999999999988888777777888999999999999998889999863 22 34566789
Q ss_pred CCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCC
Q psy3840 78 HSAPALDVDWQSNTS-FASCSTDQHIHVCKLH 108 (131)
Q Consensus 78 ~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~ 108 (131)
|...|...+|+|+.. .++.+.||++++||+.
T Consensus 277 H~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 277 HQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred chhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 999999999999965 9999999999999975
No 141
>KOG0288|consensus
Probab=99.60 E-value=6.4e-14 Score=89.22 Aligned_cols=111 Identities=21% Similarity=0.247 Sum_probs=90.2
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC----CCCe
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH----SAPA 82 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~----~~~v 82 (131)
...+++|-.|++|++||.. ..+...... .+.|+++..++++..+++.+.|.++.+.|+++.+....+... ....
T Consensus 312 ~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~-gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDw 390 (459)
T KOG0288|consen 312 ISDVISGHFDKKVRFWDIRSADKTRSVPL-GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDW 390 (459)
T ss_pred ceeeeecccccceEEEeccCCceeeEeec-CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccccccccc
Confidence 3456677789999999977 444444444 459999999999999999999999999999998877766532 2347
Q ss_pred EEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecc
Q psy3840 83 LDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 83 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
+.+.|+|++. +++|+.||.|+||++.++++...+...
T Consensus 391 trvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s 428 (459)
T KOG0288|consen 391 TRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLS 428 (459)
T ss_pred ceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccC
Confidence 8899999987 789999999999999999888777643
No 142
>KOG1036|consensus
Probab=99.60 E-value=5.5e-14 Score=86.53 Aligned_cols=103 Identities=18% Similarity=0.315 Sum_probs=86.2
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEE
Q psy3840 7 NGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 86 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 86 (131)
+...+++|+-||.|+.+|++......+..|..++.|+..++....+++|++|++|++||.+.......+.. ...|.++.
T Consensus 64 d~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~ 142 (323)
T KOG1036|consen 64 DESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMD 142 (323)
T ss_pred CCceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEe
Confidence 35678999999999999999877788889999999999999888999999999999999998555555443 34777776
Q ss_pred EcCCCcEEEEeCCCcEEEEeCCCCe
Q psy3840 87 WQSNTSFASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 87 ~~~~~~~~~~~~d~~i~i~d~~~~~ 111 (131)
... .+|+.|+.+..+.+||+|+..
T Consensus 143 v~g-~~LvVg~~~r~v~iyDLRn~~ 166 (323)
T KOG1036|consen 143 VSG-NRLVVGTSDRKVLIYDLRNLD 166 (323)
T ss_pred ccC-CEEEEeecCceEEEEEccccc
Confidence 643 358889999999999998753
No 143
>KOG2048|consensus
Probab=99.59 E-value=4.1e-14 Score=94.58 Aligned_cols=124 Identities=19% Similarity=0.262 Sum_probs=98.9
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCce---eecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee---
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLK---STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS--- 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~--- 76 (131)
+.+|.+..++.|++||.+..++...+.+ ..+...++.+.++.|+|++..++.|+.||.|++||..++..+....
T Consensus 117 ai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~ 196 (691)
T KOG2048|consen 117 AINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQL 196 (691)
T ss_pred EeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecc
Confidence 3578889999999999777777653222 2334456899999999999999999999999999999887665221
Q ss_pred ----c-CCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 77 ----F-HSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 77 ----~-~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
. ...-|+++.+-.++.+++|+..|.|++||...+..++++..|...+.+.
T Consensus 197 d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~L 251 (691)
T KOG2048|consen 197 DRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLAL 251 (691)
T ss_pred cccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEE
Confidence 1 2234788888888999999999999999999999999988887766543
No 144
>KOG2048|consensus
Probab=99.59 E-value=1.4e-13 Score=92.05 Aligned_cols=111 Identities=14% Similarity=0.246 Sum_probs=93.8
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCccee--eeeecCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE--QQFSFHS 79 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~--~~~~~~~ 79 (131)
+|+ ++.+|++.+-+|.|.-||+. .++........+.|++++.+|.+..++.|+.||.++.++...++.. ..+...+
T Consensus 76 ~W~-e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~ 154 (691)
T KOG2048|consen 76 AWA-EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQK 154 (691)
T ss_pred EEc-cCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeeccccc
Confidence 355 46777888889999999987 7888888888899999999999999999999998878887776544 2344456
Q ss_pred CCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeE
Q psy3840 80 APALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVK 114 (131)
Q Consensus 80 ~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~ 114 (131)
+++.+++|+|++. +++|+.||.|++||..+++.+.
T Consensus 155 sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~ 190 (691)
T KOG2048|consen 155 SRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLH 190 (691)
T ss_pred ceEEEEEecCCccEEEecccCceEEEEEcCCCceEE
Confidence 8999999999987 9999999999999999987766
No 145
>KOG0307|consensus
Probab=99.59 E-value=3e-15 Score=104.49 Aligned_cols=112 Identities=21% Similarity=0.391 Sum_probs=91.0
Q ss_pred EEEEEeCCCeEEEEcCC-------CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeeeec--CC
Q psy3840 10 FLATGSYDGYARIWTSD-------GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQFSF--HS 79 (131)
Q Consensus 10 ~l~~~~~d~~i~~~~~~-------~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~--~~ 79 (131)
.|+.|..||.|-+||.. ...+.+...|++.|..+.|++ .++++++|+.+|.|.+||+.+.+....... ..
T Consensus 82 lIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~ 161 (1049)
T KOG0307|consen 82 LIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPP 161 (1049)
T ss_pred eeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCc
Confidence 48888999999999965 234566778999999999999 666999999999999999998655544422 34
Q ss_pred CCeEEEEEcCC-Cc-EEEEeCCCcEEEEeCCCCeeeEEEecccc
Q psy3840 80 APALDVDWQSN-TS-FASCSTDQHIHVCKLHSDKPVKSFEGHTR 121 (131)
Q Consensus 80 ~~v~~~~~~~~-~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 121 (131)
..|.+++|+.. .+ |++++.++.+.|||+|..+++..+..+..
T Consensus 162 ~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~ 205 (1049)
T KOG0307|consen 162 SEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPG 205 (1049)
T ss_pred ccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCC
Confidence 67999999876 33 88999999999999999888877766555
No 146
>KOG1063|consensus
Probab=99.59 E-value=1.2e-14 Score=97.44 Aligned_cols=108 Identities=19% Similarity=0.346 Sum_probs=90.9
Q ss_pred cccCCCCEEEEEeCCC-----eEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcce----e
Q psy3840 3 SSRNNGSFLATGSYDG-----YARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQC----E 72 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~-----~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~----~ 72 (131)
+.+|+++++|+++... .|++|+.. -..+..+.+|.-.|+.++|+|+++++++.+.|+++.+|...+... .
T Consensus 532 ~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~f 611 (764)
T KOG1063|consen 532 AISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRF 611 (764)
T ss_pred EecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhh
Confidence 3588999999998755 38899986 445557889999999999999999999999999999998754321 2
Q ss_pred eeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCC
Q psy3840 73 QQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 73 ~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~ 110 (131)
...+.|+.-|++..|+|+.+ ++|++.|.+|.+|.....
T Consensus 612 a~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 612 ACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred ccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 33567888899999999987 999999999999988766
No 147
>KOG2110|consensus
Probab=99.59 E-value=1.6e-13 Score=86.30 Aligned_cols=106 Identities=21% Similarity=0.349 Sum_probs=85.7
Q ss_pred cCCCCEEEEEe--CCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCc-EEEEECCCcceeeeeecCC-
Q psy3840 5 RNNGSFLATGS--YDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKT-TIIWDAASGQCEQQFSFHS- 79 (131)
Q Consensus 5 ~~~~~~l~~~~--~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~-i~~~d~~~~~~~~~~~~~~- 79 (131)
++.+.+++.=+ ..|.|.+||.. -+++..+..|.+++.+++|+++|.++++++..|+ |+++.+.+|+.+..++...
T Consensus 138 n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~ 217 (391)
T KOG2110|consen 138 NNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY 217 (391)
T ss_pred CCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce
Confidence 33444666532 26789999976 5677788899999999999999999999999987 6799999999998887433
Q ss_pred -CCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCC
Q psy3840 80 -APALDVDWQSNTS-FASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 80 -~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~ 110 (131)
..+.+++|+|+++ |.+.+..++|++|.+..-
T Consensus 218 ~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 218 PVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV 250 (391)
T ss_pred eeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence 3578999999988 566677789999988643
No 148
>KOG1007|consensus
Probab=99.58 E-value=4.1e-14 Score=86.86 Aligned_cols=120 Identities=20% Similarity=0.390 Sum_probs=92.3
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCc-eeec-----ccccccEEEEEEcC--CCCEEEEEeCCCcEEEEECCCcceeee
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSL-KSTL-----GQHKGPIFALKWNK--RGNYILSAGVDKTTIIWDAASGQCEQQ 74 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~-~~~~-----~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~~~~~ 74 (131)
|.|++..+++-. |..|.+|++. +.. +..+ ..+....++-+|+| +++.+++. .|+++..||+++.+....
T Consensus 131 w~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~s 208 (370)
T KOG1007|consen 131 WEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNS 208 (370)
T ss_pred EcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcc
Confidence 678888888864 8889999986 222 2222 22556677889999 77777665 788999999998776655
Q ss_pred ee-cCCCCeEEEEEcCCCc--EEEEeCCCcEEEEeCCCC-eeeEEEecccceEEE
Q psy3840 75 FS-FHSAPALDVDWQSNTS--FASCSTDQHIHVCKLHSD-KPVKSFEGHTRVYYL 125 (131)
Q Consensus 75 ~~-~~~~~v~~~~~~~~~~--~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~ 125 (131)
+. .|...+..+.|+|+.+ |++|++|+.|++||+|.. .++.++.+|..-+..
T Consensus 209 I~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~ 263 (370)
T KOG1007|consen 209 IEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWA 263 (370)
T ss_pred hhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEE
Confidence 54 5777899999999865 899999999999999865 578888888766544
No 149
>KOG2096|consensus
Probab=99.57 E-value=5.9e-14 Score=87.23 Aligned_cols=123 Identities=14% Similarity=0.239 Sum_probs=94.4
Q ss_pred CccccCCCCEEEEEeCCCeEEEEcCC----C-----CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc--
Q psy3840 1 MQSSRNNGSFLATGSYDGYARIWTSD----G-----SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG-- 69 (131)
Q Consensus 1 ~~~~~~~~~~l~~~~~d~~i~~~~~~----~-----~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~-- 69 (131)
+.+.||+|+++++++-...|++|.+- | ..+..+++|...|..++|+++...+++.+.||++++||..-.
T Consensus 233 ~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~ 312 (420)
T KOG2096|consen 233 DAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYE 312 (420)
T ss_pred ceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEe
Confidence 35789999999999988889999853 2 345678999999999999999999999999999999997631
Q ss_pred -----ceeeee----ecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEe-cccceE
Q psy3840 70 -----QCEQQF----SFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE-GHTRVY 123 (131)
Q Consensus 70 -----~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~ 123 (131)
+.+... .........+..+|++..+..+....+++|..++++....++ .|...+
T Consensus 313 ~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~I 376 (420)
T KOG2096|consen 313 AGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDIHSTTI 376 (420)
T ss_pred cCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHHhhcCce
Confidence 222221 122344558999999997777777889999998886655543 354443
No 150
>KOG2445|consensus
Probab=99.56 E-value=2.3e-13 Score=84.08 Aligned_cols=108 Identities=24% Similarity=0.379 Sum_probs=86.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC---C--CceeecccccccEEEEEEcC--CCCEEEEEeCCCcEEEEECCC-------
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD---G--SLKSTLGQHKGPIFALKWNK--RGNYILSAGVDKTTIIWDAAS------- 68 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~---~--~~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~------- 68 (131)
.|.+.|+++++|+.|++|++||.. + .....-+.|.+.|..+.|.+ =|+.+++++.|+++.+|.=..
T Consensus 20 s~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~ 99 (361)
T KOG2445|consen 20 SFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHG 99 (361)
T ss_pred eecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccccccccc
Confidence 477889999999999999999964 2 23344567999999999965 578999999999999997521
Q ss_pred --cceeeeeecCCCCeEEEEEcCC--Cc-EEEEeCCCcEEEEeCCCC
Q psy3840 69 --GQCEQQFSFHSAPALDVDWQSN--TS-FASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 69 --~~~~~~~~~~~~~v~~~~~~~~--~~-~~~~~~d~~i~i~d~~~~ 110 (131)
.....++...+..|+++.|.|. |. +++++.||.++||+....
T Consensus 100 ~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp 146 (361)
T KOG2445|consen 100 RRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDP 146 (361)
T ss_pred ceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCc
Confidence 1234556667789999999997 44 899999999999986544
No 151
>KOG0322|consensus
Probab=99.56 E-value=4.3e-14 Score=85.71 Aligned_cols=69 Identities=20% Similarity=0.284 Sum_probs=63.2
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCC-CcEEEEeCCCcEEEEeC
Q psy3840 39 PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSN-TSFASCSTDQHIHVCKL 107 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~d~~i~i~d~ 107 (131)
.+..+.+.||++.++++++|+.+++|..++..++..+..|...|++++|+|+ +.+++++.|++|.+|++
T Consensus 253 Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 253 GVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 3456777899999999999999999999999999999999999999999999 45899999999999986
No 152
>KOG3881|consensus
Probab=99.56 E-value=1.2e-13 Score=87.50 Aligned_cols=110 Identities=14% Similarity=0.190 Sum_probs=98.7
Q ss_pred CCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeee-eecCCCCeEE
Q psy3840 8 GSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ-FSFHSAPALD 84 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~-~~~~~~~v~~ 84 (131)
...+++++.-+.+++||.. .+++..+...+.+++++...|+++.+++|...+.+..||++.++.... +.+..+.+.+
T Consensus 216 ~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirs 295 (412)
T KOG3881|consen 216 NYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRS 295 (412)
T ss_pred CceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcce
Confidence 6889999999999999987 677788888888999999999999999999999999999999998877 7888899999
Q ss_pred EEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 85 VDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 85 ~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
+..+|... +++++-|+.++|+|+++.+.+....
T Consensus 296 ih~hp~~~~las~GLDRyvRIhD~ktrkll~kvY 329 (412)
T KOG3881|consen 296 IHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVY 329 (412)
T ss_pred EEEcCCCceEEeeccceeEEEeecccchhhhhhh
Confidence 99999977 8999999999999999866665543
No 153
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.56 E-value=7.3e-13 Score=83.53 Aligned_cols=108 Identities=12% Similarity=0.124 Sum_probs=83.4
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEE-EEEeCCCcEEEEECCCcceeeeeecCCCCeEEE
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYI-LSAGVDKTTIIWDAASGQCEQQFSFHSAPALDV 85 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~-~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~ 85 (131)
+..+++++.|+.+++||.. ++.+..+..+. .+..++|+|++..+ ++++.++.+++||..+++....+..+. .+..+
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~ 78 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP-DPELF 78 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC-CccEE
Confidence 3567888999999999986 66666666544 35789999999876 566778999999999988776665433 35678
Q ss_pred EEcCCCc-E-EEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 86 DWQSNTS-F-ASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 86 ~~~~~~~-~-~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
.++|+++ + +++..++.+++||+++.+.+..+.
T Consensus 79 ~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~ 112 (300)
T TIGR03866 79 ALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP 112 (300)
T ss_pred EECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee
Confidence 8999976 5 445568899999999887776665
No 154
>KOG0268|consensus
Probab=99.56 E-value=5.2e-14 Score=88.54 Aligned_cols=107 Identities=24% Similarity=0.412 Sum_probs=83.1
Q ss_pred CEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc------------------
Q psy3840 9 SFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG------------------ 69 (131)
Q Consensus 9 ~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~------------------ 69 (131)
..+++|+.||.|++||+. ..+..++..|.+.|..++++. ..+++++.|.+++.|-+...
T Consensus 80 s~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~ 157 (433)
T KOG0268|consen 80 STVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHR 157 (433)
T ss_pred hhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccCCcceeeecccccccccccc
Confidence 568999999999999987 677888999999999999876 67888899999988873221
Q ss_pred --------------------ceeeeeecCCCCeEEEEEcCCCc--EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 70 --------------------QCEQQFSFHSAPALDVDWQSNTS--FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 70 --------------------~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
.++..+.-....+.++.|+|-.. |++++.|+.|.+||++++.++..+.
T Consensus 158 ~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi 227 (433)
T KOG0268|consen 158 KNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI 227 (433)
T ss_pred ccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee
Confidence 12222222345677888888533 7888899999999999998877653
No 155
>KOG1332|consensus
Probab=99.56 E-value=3.6e-14 Score=85.22 Aligned_cols=118 Identities=22% Similarity=0.366 Sum_probs=91.7
Q ss_pred cCCCCEEEEEeCCCeEEEEcCCCC---ceeecccccccEEEEEEcC--CCCEEEEEeCCCcEEEEECCCc---ceeeeee
Q psy3840 5 RNNGSFLATGSYDGYARIWTSDGS---LKSTLGQHKGPIFALKWNK--RGNYILSAGVDKTTIIWDAASG---QCEQQFS 76 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~~~---~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~---~~~~~~~ 76 (131)
+.-|.+||+++.||.|.+|...+. .......|...+.+++|.| -|-.|++++.||.|.+.+.+.. .......
T Consensus 67 Pk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~ 146 (299)
T KOG1332|consen 67 PKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVF 146 (299)
T ss_pred cccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhh
Confidence 447999999999999999997633 3345567899999999999 4567889999999999988754 2234456
Q ss_pred cCCCCeEEEEEcCC---C------------cEEEEeCCCcEEEEeCCCCe--eeEEEecccce
Q psy3840 77 FHSAPALDVDWQSN---T------------SFASCSTDQHIHVCKLHSDK--PVKSFEGHTRV 122 (131)
Q Consensus 77 ~~~~~v~~~~~~~~---~------------~~~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~ 122 (131)
.|...+++++|.|. + +|++|+.|..|+||+...++ .-..+.+|..-
T Consensus 147 aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dw 209 (299)
T KOG1332|consen 147 AHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDW 209 (299)
T ss_pred ccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchh
Confidence 78889999999874 3 38999999999999988753 33345666543
No 156
>KOG0321|consensus
Probab=99.56 E-value=3.4e-14 Score=94.66 Aligned_cols=103 Identities=20% Similarity=0.268 Sum_probs=89.0
Q ss_pred CCCEEEEEeCCCeEEEEcCCC---C----ceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeee--eec
Q psy3840 7 NGSFLATGSYDGYARIWTSDG---S----LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ--FSF 77 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~---~----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~--~~~ 77 (131)
..++|+.+.++|.|.++|... . .......|.+.|..+.|-|....|++++.|.++++||+..++++.. +.+
T Consensus 63 ~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~G 142 (720)
T KOG0321|consen 63 KEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLG 142 (720)
T ss_pred ccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecc
Confidence 457899999999999999761 1 1244456999999999999888999999999999999999888766 889
Q ss_pred CCCCeEEEEEcCCCc--EEEEeCCCcEEEEeCCC
Q psy3840 78 HSAPALDVDWQSNTS--FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 78 ~~~~v~~~~~~~~~~--~~~~~~d~~i~i~d~~~ 109 (131)
|...+.+++|.|... |++|+.|+.+.|||++-
T Consensus 143 H~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~ 176 (720)
T KOG0321|consen 143 HTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRC 176 (720)
T ss_pred cccccchhhhccCCCcceeeccCCCcEEEEEEec
Confidence 999999999999754 89999999999999874
No 157
>KOG2919|consensus
Probab=99.55 E-value=7.9e-14 Score=86.74 Aligned_cols=118 Identities=23% Similarity=0.330 Sum_probs=91.8
Q ss_pred cccCC-CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeC-CCcEEEEECCC-cceeeeeecC
Q psy3840 3 SSRNN-GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGV-DKTTIIWDAAS-GQCEQQFSFH 78 (131)
Q Consensus 3 ~~~~~-~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~~~-~~~~~~~~~~ 78 (131)
+|+|. ...++.|+...++=||+-. +.++..+.+|.+.|+.++|.++|+.+++|.. +-.|..||++. +.++..+..|
T Consensus 214 a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rh 293 (406)
T KOG2919|consen 214 AFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERH 293 (406)
T ss_pred eccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhh
Confidence 45664 4588999888888888754 7788888899999999999999999999987 77899999986 4556666666
Q ss_pred CC-CeEEEEEc--CCCc-EEEEeCCCcEEEEeCCC-CeeeEEEeccc
Q psy3840 79 SA-PALDVDWQ--SNTS-FASCSTDQHIHVCKLHS-DKPVKSFEGHT 120 (131)
Q Consensus 79 ~~-~v~~~~~~--~~~~-~~~~~~d~~i~i~d~~~-~~~~~~~~~~~ 120 (131)
.. .-..|.|. |.++ |++|+.||.|++||+++ +..+..+..+.
T Consensus 294 v~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~s 340 (406)
T KOG2919|consen 294 VGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYS 340 (406)
T ss_pred ccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccccc
Confidence 55 45567664 5566 78888999999999988 55455544333
No 158
>KOG1007|consensus
Probab=99.55 E-value=6.6e-14 Score=85.95 Aligned_cols=104 Identities=19% Similarity=0.249 Sum_probs=84.6
Q ss_pred cccC--CCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcCC-CCEEEEEeCCCcEEEEECCC-cceeeeee
Q psy3840 3 SSRN--NGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKR-GNYILSAGVDKTTIIWDAAS-GQCEQQFS 76 (131)
Q Consensus 3 ~~~~--~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~-~~~~~~~~ 76 (131)
.|+| +++.+++. .|+++..||+. .+....-..|...+..+.|+|+ ...+++++.||.+++||.++ ..++..+.
T Consensus 177 ~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~ 255 (370)
T KOG1007|consen 177 AWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELP 255 (370)
T ss_pred ccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccC
Confidence 3555 78888886 58899999987 2333334568889999999995 55788999999999999986 45678888
Q ss_pred cCCCCeEEEEEcCC-Cc-EEEEeCCCcEEEEeC
Q psy3840 77 FHSAPALDVDWQSN-TS-FASCSTDQHIHVCKL 107 (131)
Q Consensus 77 ~~~~~v~~~~~~~~-~~-~~~~~~d~~i~i~d~ 107 (131)
+|..-++++.|+|. .+ +++++.|..|.+|..
T Consensus 256 ~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca 288 (370)
T KOG1007|consen 256 GHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCA 288 (370)
T ss_pred CCceEEEEEEecCccceEEEecCCCceeEEEec
Confidence 99999999999997 34 789999999999854
No 159
>KOG1539|consensus
Probab=99.55 E-value=3.8e-13 Score=92.00 Aligned_cols=114 Identities=15% Similarity=0.202 Sum_probs=101.9
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEE
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 86 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 86 (131)
-+.++.|+.+|.+.+||++ ++.+.+++++...|+++.-+|--..++.|..+|+|.+++++.++.+.+++...++|++++
T Consensus 172 LNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslS 251 (910)
T KOG1539|consen 172 LNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLS 251 (910)
T ss_pred eeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEE
Confidence 4789999999999999998 889999999999999999999888999999999999999999999999997778999999
Q ss_pred EcCCCc--EEEEeCCCcEEEEeCCCCeeeEEEe-cccc
Q psy3840 87 WQSNTS--FASCSTDQHIHVCKLHSDKPVKSFE-GHTR 121 (131)
Q Consensus 87 ~~~~~~--~~~~~~d~~i~i~d~~~~~~~~~~~-~~~~ 121 (131)
|..||. +++++..|.+.+||++..+.+.... .|.+
T Consensus 252 FrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~ 289 (910)
T KOG1539|consen 252 FRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYG 289 (910)
T ss_pred eccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccC
Confidence 998877 7888888999999999877666554 5633
No 160
>KOG1034|consensus
Probab=99.54 E-value=3.2e-13 Score=84.13 Aligned_cols=64 Identities=17% Similarity=0.433 Sum_probs=55.8
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeec---ccccccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTL---GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 67 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~---~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~ 67 (131)
.....+++++++.|..|++||++ ..++..+ .+|.+.|.++.|++++..+++++.|.++++|++.
T Consensus 144 ~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~ 211 (385)
T KOG1034|consen 144 HPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN 211 (385)
T ss_pred CCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence 34456899999999999999998 5555444 5699999999999999999999999999999998
No 161
>KOG1445|consensus
Probab=99.54 E-value=6.4e-14 Score=93.96 Aligned_cols=116 Identities=22% Similarity=0.389 Sum_probs=95.9
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCcee-------ecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCC
Q psy3840 7 NGSFLATGSYDGYARIWTSDGSLKS-------TLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
+..+|++|+.|..|++|.+....-. .+.+.+-.+.++.|+|...-++..+..|.+++||+.+++....+.+|.
T Consensus 91 ~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g~v~i~D~stqk~~~el~~h~ 170 (1012)
T KOG1445|consen 91 ADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHGSVYITDISTQKTAVELSGHT 170 (1012)
T ss_pred chhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCceEEEEEcccCceeecccCCc
Confidence 5678899999999999998722211 222334478899999977667777788999999999999999999999
Q ss_pred CCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCC-eeeEEEecccce
Q psy3840 80 APALDVDWQSNTS-FASCSTDQHIHVCKLHSD-KPVKSFEGHTRV 122 (131)
Q Consensus 80 ~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~ 122 (131)
..|.+..|+.||. +++++.|..|+|||.|.. ++++..++|.+.
T Consensus 171 d~vQSa~WseDG~llatscKdkqirifDPRa~~~piQ~te~H~~~ 215 (1012)
T KOG1445|consen 171 DKVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPIQTTEGHGGM 215 (1012)
T ss_pred hhhhccccccCCceEeeecCCcceEEeCCccCCCccccccccccc
Confidence 9999999999998 788899999999999864 788888888764
No 162
>KOG0321|consensus
Probab=99.53 E-value=6.2e-14 Score=93.44 Aligned_cols=108 Identities=19% Similarity=0.286 Sum_probs=81.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceee--cccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcc--e------
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKST--LGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQ--C------ 71 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~--~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~--~------ 71 (131)
|.|-...|++++.|.++++||++ ++.+.. +.+|++.+.+++|.| +...+++|+.||.+.|||++-.. .
T Consensus 108 wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~ 187 (720)
T KOG0321|consen 108 WAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDN 187 (720)
T ss_pred cCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhh
Confidence 56666788889999999999998 444444 789999999999999 67789999999999999997432 0
Q ss_pred ------------ee-------eeecCC----CCeEEEEEcCCCcEEEEeC-CCcEEEEeCCCCe
Q psy3840 72 ------------EQ-------QFSFHS----APALDVDWQSNTSFASCST-DQHIHVCKLHSDK 111 (131)
Q Consensus 72 ------------~~-------~~~~~~----~~v~~~~~~~~~~~~~~~~-d~~i~i~d~~~~~ 111 (131)
.. ....+. ..|+.+.|..+..|++++. |+.|+|||+++..
T Consensus 188 ~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~ 251 (720)
T KOG0321|consen 188 RIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNY 251 (720)
T ss_pred hhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccc
Confidence 00 001111 2356677776777888877 9999999998753
No 163
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.53 E-value=3.5e-12 Score=76.34 Aligned_cols=112 Identities=15% Similarity=0.351 Sum_probs=79.1
Q ss_pred cccCCCCEEEEEeC----------CCeEEEEcC--CCCceeeccc-ccccEEEEEEcCCCCEEEEE--eCCCcEEEEECC
Q psy3840 3 SSRNNGSFLATGSY----------DGYARIWTS--DGSLKSTLGQ-HKGPIFALKWNKRGNYILSA--GVDKTTIIWDAA 67 (131)
Q Consensus 3 ~~~~~~~~l~~~~~----------d~~i~~~~~--~~~~~~~~~~-~~~~i~~~~~~~~~~~~~s~--~~d~~i~~~d~~ 67 (131)
.|+++|+.|++-.. -+...+|.+ .+.....+.- ..++|..++|+|+++.++.. ..+..+.+||++
T Consensus 12 ~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~ 91 (194)
T PF08662_consen 12 HWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK 91 (194)
T ss_pred EecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc
Confidence 37888988876543 122444443 3444444433 34579999999999986544 457799999996
Q ss_pred CcceeeeeecCCCCeEEEEEcCCCc-EEEEeC---CCcEEEEeCCCCeeeEEEe
Q psy3840 68 SGQCEQQFSFHSAPALDVDWQSNTS-FASCST---DQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 68 ~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~---d~~i~i~d~~~~~~~~~~~ 117 (131)
++.+..+. ......+.|+|+|+ +++++. .|.+.+||.++.+.+.+..
T Consensus 92 -~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~ 142 (194)
T PF08662_consen 92 -GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE 142 (194)
T ss_pred -ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc
Confidence 65555554 45778899999988 666654 3679999999888887765
No 164
>KOG4328|consensus
Probab=99.53 E-value=2.1e-13 Score=87.90 Aligned_cols=105 Identities=18% Similarity=0.179 Sum_probs=86.1
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCc--ce--eeeee
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASG--QC--EQQFS 76 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~--~~--~~~~~ 76 (131)
++.+...++.+..-|...+||.. +.....+.-|..+|..|+++| ...++++++.|++.+|||++.- +. +....
T Consensus 287 ~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~ 366 (498)
T KOG4328|consen 287 FSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTL 366 (498)
T ss_pred ccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecc
Confidence 56667778888888889999976 565677778888999999999 6778999999999999999863 22 22233
Q ss_pred cCCCCeEEEEEcCC-CcEEEEeCCCcEEEEeCC
Q psy3840 77 FHSAPALDVDWQSN-TSFASCSTDQHIHVCKLH 108 (131)
Q Consensus 77 ~~~~~v~~~~~~~~-~~~~~~~~d~~i~i~d~~ 108 (131)
.|+..|.+..|+|. +.+++.+.|..|+|||..
T Consensus 367 ~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 367 PHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred cccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence 57889999999998 459999999999999983
No 165
>KOG2106|consensus
Probab=99.52 E-value=9.9e-13 Score=86.01 Aligned_cols=104 Identities=16% Similarity=0.228 Sum_probs=87.1
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
+.+|+.+.+++++.|+.+++|+ ..+++.+ +.-.+++.|+.|+|.+ .++.|...|...+.|.++...+..-.. ..++
T Consensus 375 a~hps~~q~~T~gqdk~v~lW~-~~k~~wt-~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~l 450 (626)
T KOG2106|consen 375 ATHPSKNQLLTCGQDKHVRLWN-DHKLEWT-KIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQL 450 (626)
T ss_pred EcCCChhheeeccCcceEEEcc-CCceeEE-EEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCce
Confidence 3578889999999999999999 4444333 3356788999999999 899999999999999999666555444 7899
Q ss_pred EEEEEcCCCc-EEEEeCCCcEEEEeCCCC
Q psy3840 83 LDVDWQSNTS-FASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 83 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~~ 110 (131)
+.++|+|+|. ++.|+.|+.|++|.+...
T Consensus 451 s~v~ysp~G~~lAvgs~d~~iyiy~Vs~~ 479 (626)
T KOG2106|consen 451 SVVRYSPDGAFLAVGSHDNHIYIYRVSAN 479 (626)
T ss_pred EEEEEcCCCCEEEEecCCCeEEEEEECCC
Confidence 9999999987 899999999999998654
No 166
>KOG1009|consensus
Probab=99.52 E-value=6.5e-14 Score=88.98 Aligned_cols=108 Identities=26% Similarity=0.478 Sum_probs=93.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC--------C-----C----ceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD--------G-----S----LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA 66 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~--------~-----~----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~ 66 (131)
|+|+|+++++|+++|.|.+|-.. . + ....+.+|...+..++|+|++..+++++.|..+++||+
T Consensus 73 f~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv 152 (434)
T KOG1009|consen 73 FSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDV 152 (434)
T ss_pred EcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEe
Confidence 78999999999999999999543 1 1 23456779999999999999999999999999999999
Q ss_pred CCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCe
Q psy3840 67 ASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 67 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~ 111 (131)
..|.....+..|..-+..++|.|.++ +++-+.|+..+.+.+...+
T Consensus 153 ~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~ 198 (434)
T KOG1009|consen 153 HAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQ 198 (434)
T ss_pred ccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeee
Confidence 99999999999999999999999877 7888888877777765443
No 167
>KOG0303|consensus
Probab=99.52 E-value=4.4e-13 Score=85.27 Aligned_cols=106 Identities=15% Similarity=0.256 Sum_probs=85.4
Q ss_pred ccC-CCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC-
Q psy3840 4 SRN-NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA- 80 (131)
Q Consensus 4 ~~~-~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~- 80 (131)
|+| ..+.|++++.|.+|.+||+. ++.+.++. |.+-|.++.|+.+|.++++.+.|..|++||.++++.+..-..|.+
T Consensus 139 wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~ 217 (472)
T KOG0303|consen 139 WHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGA 217 (472)
T ss_pred ecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCC
Confidence 444 56788899999999999997 66666666 999999999999999999999999999999999999887766654
Q ss_pred CeEEEEEcCCCcEEEEe----CCCcEEEEeCCCC
Q psy3840 81 PALDVDWQSNTSFASCS----TDQHIHVCKLHSD 110 (131)
Q Consensus 81 ~v~~~~~~~~~~~~~~~----~d~~i~i~d~~~~ 110 (131)
.....-|-.++.+++.+ .++.+-+||....
T Consensus 218 k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl 251 (472)
T KOG0303|consen 218 KPARAIFLASGKIFTTGFSRMSERQIALWDPNNL 251 (472)
T ss_pred CcceeEEeccCceeeeccccccccceeccCcccc
Confidence 45566677777765554 4567899986543
No 168
>KOG1272|consensus
Probab=99.51 E-value=5.1e-14 Score=90.99 Aligned_cols=115 Identities=15% Similarity=0.202 Sum_probs=102.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
|-|..-+|++++..|.++.-|++ |+.+..+....+.+..|..+|-...+-.|...|++.+|.....+++..+..|.++|
T Consensus 217 FLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V 296 (545)
T KOG1272|consen 217 FLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPV 296 (545)
T ss_pred ccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCc
Confidence 45666678888889999999988 88888888888899999999988888999999999999999999999999999999
Q ss_pred EEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEec
Q psy3840 83 LDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 83 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
.++++.++|+ .++.+.|+.++|||+|....+.++..
T Consensus 297 ~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t 333 (545)
T KOG1272|consen 297 SSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT 333 (545)
T ss_pred ceEEECCCCcEEeecccccceeEeeeccccccceeec
Confidence 9999999998 79999999999999998877766643
No 169
>KOG1310|consensus
Probab=99.51 E-value=1.4e-13 Score=90.90 Aligned_cols=107 Identities=24% Similarity=0.339 Sum_probs=90.5
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeec-ccccccEEEEEEcC--CCCEEEEEeCCCcEEEEECCC----------
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTL-GQHKGPIFALKWNK--RGNYILSAGVDKTTIIWDAAS---------- 68 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~-~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~---------- 68 (131)
.|+.+|.+|++|++|..+.+||.. .++++.+ .+|...|.+++|-| +.+.+++|..|..|+++|+..
T Consensus 57 eWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~ 136 (758)
T KOG1310|consen 57 EWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGM 136 (758)
T ss_pred eecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCc
Confidence 589999999999999999999976 5555444 58999999999999 567899999999999999984
Q ss_pred cceeeeeecCCCCeEEEEEcCCC-c-EEEEeCCCcEEEEeCCC
Q psy3840 69 GQCEQQFSFHSAPALDVDWQSNT-S-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 69 ~~~~~~~~~~~~~v~~~~~~~~~-~-~~~~~~d~~i~i~d~~~ 109 (131)
.+....+..|...|..++-.|++ . +-+++.||.++-+|+|.
T Consensus 137 ~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiRE 179 (758)
T KOG1310|consen 137 EETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIRE 179 (758)
T ss_pred cchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccC
Confidence 23345566788889899998885 3 88999999999999986
No 170
>KOG1274|consensus
Probab=99.51 E-value=4.8e-13 Score=92.23 Aligned_cols=115 Identities=19% Similarity=0.250 Sum_probs=98.8
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
++..+.+.+++|+.+++|..|.+. +..-..+...+-++.+++++-+|++++.|+.|-.|++-++........+.+|..+
T Consensus 61 ~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~ap 140 (933)
T KOG1274|consen 61 SIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAP 140 (933)
T ss_pred EEeecccceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCc
Confidence 455667899999999999999987 3333344556678999999999999999999999999999998888999999999
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
|.++.|+|++. |++.+.||.|++||+.++.+..++.
T Consensus 141 Vl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~ 177 (933)
T KOG1274|consen 141 VLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLT 177 (933)
T ss_pred eeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcc
Confidence 99999999988 7889999999999999876655543
No 171
>KOG1188|consensus
Probab=99.50 E-value=4.2e-13 Score=83.83 Aligned_cols=101 Identities=15% Similarity=0.236 Sum_probs=82.0
Q ss_pred CEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcC--CCCEEEEEeCCCcEEEEECCCcceeee-----------
Q psy3840 9 SFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNK--RGNYILSAGVDKTTIIWDAASGQCEQQ----------- 74 (131)
Q Consensus 9 ~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~~~~~----------- 74 (131)
..++++..+|.|++||.. ++.+..++++...+..++|.. .+..+.+++.||+|++||++.......
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 568888999999999976 788889999999999999877 577899999999999999986321100
Q ss_pred ----------------------------------------eecCCCCeEEEEEcCCC--cEEEEeCCCcEEEEeCCC
Q psy3840 75 ----------------------------------------FSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHS 109 (131)
Q Consensus 75 ----------------------------------------~~~~~~~v~~~~~~~~~--~~~~~~~d~~i~i~d~~~ 109 (131)
...|...|++++|+|.. .+++|+.||.+.+||++.
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~ 197 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKK 197 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCC
Confidence 01356779999999973 389999999999999864
No 172
>KOG1524|consensus
Probab=99.50 E-value=7.1e-13 Score=87.42 Aligned_cols=121 Identities=20% Similarity=0.275 Sum_probs=95.4
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
-|+|+|.-|++++.||.|++|.-.|-...++-....+|.|++|.|+.+.++-+.. +.+.+=.+.....+-.++.|.+-|
T Consensus 111 RW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL~~n~k~i~WkAHDGii 189 (737)
T KOG1524|consen 111 RWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIKPLAANSKIIRWRAHDGLV 189 (737)
T ss_pred ccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEeecccccceeEEeccCcEE
Confidence 3899999999999999999999888777777778889999999997776555432 345555566666667788999999
Q ss_pred EEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 83 LDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 83 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
.++.|++.+. +++|+.|-..++||-. |.++.+-..|.-++++
T Consensus 190 L~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITS 232 (737)
T KOG1524|consen 190 LSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITS 232 (737)
T ss_pred EEeecCccccceeecCCceeEEeeccc-CcccccCChhccceee
Confidence 9999999866 8999999999999965 5555555555554443
No 173
>KOG4328|consensus
Probab=99.48 E-value=6.5e-13 Score=85.67 Aligned_cols=124 Identities=21% Similarity=0.266 Sum_probs=91.3
Q ss_pred cccCCC--CEEEEEeCCCeEEEEcCC-----CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcce--e
Q psy3840 3 SSRNNG--SFLATGSYDGYARIWTSD-----GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQC--E 72 (131)
Q Consensus 3 ~~~~~~--~~l~~~~~d~~i~~~~~~-----~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~--~ 72 (131)
+|+|.. .++++|+..|.|=+||+. ...+..+..|.++|.++.|+| +...+++.+.||+|++-|++.+.. +
T Consensus 193 ~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v 272 (498)
T KOG4328|consen 193 AFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEV 272 (498)
T ss_pred EecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHH
Confidence 466644 578889899999999994 334556678999999999999 778999999999999999875310 0
Q ss_pred -------------------------------------------eeeecCCCCeEEEEEcCCCc--EEEEeCCCcEEEEeC
Q psy3840 73 -------------------------------------------QQFSFHSAPALDVDWQSNTS--FASCSTDQHIHVCKL 107 (131)
Q Consensus 73 -------------------------------------------~~~~~~~~~v~~~~~~~~~~--~~~~~~d~~i~i~d~ 107 (131)
..+.-|...|..++++|-.. +++++.|++.+|||+
T Consensus 273 ~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~ 352 (498)
T KOG4328|consen 273 LSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDL 352 (498)
T ss_pred hhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeeh
Confidence 00122446799999999643 899999999999999
Q ss_pred CCCe----eeEEEecccceEEEE
Q psy3840 108 HSDK----PVKSFEGHTRVYYLA 126 (131)
Q Consensus 108 ~~~~----~~~~~~~~~~~~~~~ 126 (131)
|.-. ++.....|...|.++
T Consensus 353 R~l~~K~sp~lst~~HrrsV~sA 375 (498)
T KOG4328|consen 353 RQLRGKASPFLSTLPHRRSVNSA 375 (498)
T ss_pred hhhcCCCCcceecccccceeeee
Confidence 8642 223334566555443
No 174
>KOG1408|consensus
Probab=99.48 E-value=6.8e-13 Score=90.13 Aligned_cols=119 Identities=18% Similarity=0.281 Sum_probs=95.0
Q ss_pred CCEEEEEeCCCeEEEEcCC--CCceeecccccc-----------------------------------------------
Q psy3840 8 GSFLATGSYDGYARIWTSD--GSLKSTLGQHKG----------------------------------------------- 38 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~----------------------------------------------- 38 (131)
..+||+++.|..|++||+. ..++.++.+|..
T Consensus 516 ~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ 595 (1080)
T KOG1408|consen 516 NKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLS 595 (1080)
T ss_pred hHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccc
Confidence 3577888889999999875 333333333333
Q ss_pred --cEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC---CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCee
Q psy3840 39 --PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH---SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKP 112 (131)
Q Consensus 39 --~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~---~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~ 112 (131)
.+..|+..|..+++++++.|+.|++||+.+++..+.+++. .+..-.+...|.+. +++...|.++.++|.-++++
T Consensus 596 ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEc 675 (1080)
T KOG1408|consen 596 KTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGEC 675 (1080)
T ss_pred cceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchh
Confidence 3456777788889999999999999999999999998863 34455677789887 89999999999999999999
Q ss_pred eEEEecccceEEEE
Q psy3840 113 VKSFEGHTRVYYLA 126 (131)
Q Consensus 113 ~~~~~~~~~~~~~~ 126 (131)
+..+.+|.+.++.+
T Consensus 676 vA~m~GHsE~VTG~ 689 (1080)
T KOG1408|consen 676 VAQMTGHSEAVTGV 689 (1080)
T ss_pred hhhhcCcchheeee
Confidence 99999999887654
No 175
>KOG0644|consensus
Probab=99.47 E-value=2.8e-14 Score=97.80 Aligned_cols=103 Identities=20% Similarity=0.340 Sum_probs=95.5
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.|...|.++++|++|..+++|... ..+...+.+|.+.++.++.+.+...+++++.|..|++|.+..+.++..+.+|.+.
T Consensus 197 ~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtga 276 (1113)
T KOG0644|consen 197 IFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGA 276 (1113)
T ss_pred eeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccc
Confidence 467789999999999999999976 7778889999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEcCCCcEEEEeCCCcEEEEeCC
Q psy3840 82 ALDVDWQSNTSFASCSTDQHIHVCKLH 108 (131)
Q Consensus 82 v~~~~~~~~~~~~~~~~d~~i~i~d~~ 108 (131)
|++++|+|-. +.+.||++++||.+
T Consensus 277 vtaiafsP~~---sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 277 VTAIAFSPRA---SSSDDGTCRIWDAR 300 (1113)
T ss_pred eeeeccCccc---cCCCCCceEecccc
Confidence 9999999954 67889999999988
No 176
>KOG2110|consensus
Probab=99.47 E-value=8.3e-12 Score=78.80 Aligned_cols=123 Identities=18% Similarity=0.206 Sum_probs=92.0
Q ss_pred CCCEEEEEeCCCeEEEEcCC-CCceeeccc---ccccEEEEEEcCCCCEEEEEe--CCCcEEEEECCCcceeeeeecCCC
Q psy3840 7 NGSFLATGSYDGYARIWTSD-GSLKSTLGQ---HKGPIFALKWNKRGNYILSAG--VDKTTIIWDAASGQCEQQFSFHSA 80 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~---~~~~i~~~~~~~~~~~~~s~~--~d~~i~~~d~~~~~~~~~~~~~~~ 80 (131)
+.++|+++-.+ .|.+||++ .+.++++.. +...+..+.+++.+.+++.-+ ..|.+.+||..+-+.+..+..|.+
T Consensus 96 Nr~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~ 174 (391)
T KOG2110|consen 96 NRKRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKG 174 (391)
T ss_pred ccceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCC
Confidence 45677776654 49999998 566665544 333455555555666777543 368999999999999999999999
Q ss_pred CeEEEEEcCCCc-EEEEeCCCc-EEEEeCCCCeeeEEEecccceEEEEeeecC
Q psy3840 81 PALDVDWQSNTS-FASCSTDQH-IHVCKLHSDKPVKSFEGHTRVYYLAMDLLF 131 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~f 131 (131)
++.+++|+++|. ++++++.|+ |+|+.+.+|+.+.+++--.. ...+.++.|
T Consensus 175 ~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~-~~~IySL~F 226 (391)
T KOG2110|consen 175 PLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY-PVSIYSLSF 226 (391)
T ss_pred ceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce-eeEEEEEEE
Confidence 999999999998 899999886 79999999999988864332 333444443
No 177
>KOG2055|consensus
Probab=99.47 E-value=4.2e-12 Score=82.17 Aligned_cols=117 Identities=18% Similarity=0.310 Sum_probs=92.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCc---eeecccccccEEEEEEcCCCC-EEEEEeCCCcEEEEECCCccee------
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSL---KSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAASGQCE------ 72 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~------ 72 (131)
.|+|....+++++.|+++++|.+.|+. +..+.-..-+|.+..|.|+|. .+++++....++.||+.+.+..
T Consensus 220 ~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~ 299 (514)
T KOG2055|consen 220 QFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPY 299 (514)
T ss_pred EecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCC
Confidence 478999999999999999999988543 344444556899999999998 8889999999999999875321
Q ss_pred -------eee-----------e--------------------cCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeee
Q psy3840 73 -------QQF-----------S--------------------FHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 73 -------~~~-----------~--------------------~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~ 113 (131)
..+ . ...+.+..+.|+.+++ +++++.+|.|++||++...++
T Consensus 300 g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~ 379 (514)
T KOG2055|consen 300 GVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCL 379 (514)
T ss_pred CcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceE
Confidence 011 0 0135688899998887 888888999999999999988
Q ss_pred EEEecc
Q psy3840 114 KSFEGH 119 (131)
Q Consensus 114 ~~~~~~ 119 (131)
..+...
T Consensus 380 ~rf~D~ 385 (514)
T KOG2055|consen 380 HRFVDD 385 (514)
T ss_pred EEEeec
Confidence 888643
No 178
>KOG2111|consensus
Probab=99.46 E-value=2.9e-12 Score=79.50 Aligned_cols=96 Identities=22% Similarity=0.309 Sum_probs=80.2
Q ss_pred EeCCCeEEEEcCCCC---ceeecccccccEEEEEEcCCCCEEEEEeCCCc-EEEEECCCcceeeeeec--CCCCeEEEEE
Q psy3840 14 GSYDGYARIWTSDGS---LKSTLGQHKGPIFALKWNKRGNYILSAGVDKT-TIIWDAASGQCEQQFSF--HSAPALDVDW 87 (131)
Q Consensus 14 ~~~d~~i~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~-i~~~d~~~~~~~~~~~~--~~~~v~~~~~ 87 (131)
|-.-|.|++-|+... .......|...|.|++.+.+|..+++++..|+ |++||..+|+.+..++. ....+.+++|
T Consensus 155 g~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaF 234 (346)
T KOG2111|consen 155 GFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAF 234 (346)
T ss_pred CCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEe
Confidence 344677888887632 23677889999999999999999999999998 77999999999988874 3456999999
Q ss_pred cCCCc-EEEEeCCCcEEEEeCCC
Q psy3840 88 QSNTS-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 88 ~~~~~-~~~~~~d~~i~i~d~~~ 109 (131)
+|+.. ++.+++-|+++||.++.
T Consensus 235 Sp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 235 SPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred CCCccEEEEEcCCCeEEEEEeec
Confidence 99987 77778888999999875
No 179
>KOG1272|consensus
Probab=99.42 E-value=1.1e-12 Score=84.92 Aligned_cols=101 Identities=19% Similarity=0.415 Sum_probs=83.6
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
-+|-+..+-+|..+|+|.+|... ..++..+..|.++|.++++.++|+++++.+.|..+++||+++-..+.++.. ..+.
T Consensus 259 qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a 337 (545)
T KOG1272|consen 259 QNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPA 337 (545)
T ss_pred cCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCc
Confidence 36778899999999999999987 677778888999999999999999999999999999999999877666655 4566
Q ss_pred EEEEEcCCCcEEEEeCCCcEEEEe
Q psy3840 83 LDVDWQSNTSFASCSTDQHIHVCK 106 (131)
Q Consensus 83 ~~~~~~~~~~~~~~~~d~~i~i~d 106 (131)
..++++..+.++ .+....+.||.
T Consensus 338 ~~ls~SqkglLA-~~~G~~v~iw~ 360 (545)
T KOG1272|consen 338 SNLSLSQKGLLA-LSYGDHVQIWK 360 (545)
T ss_pred ccccccccccee-eecCCeeeeeh
Confidence 777777666444 45556788884
No 180
>KOG1538|consensus
Probab=99.42 E-value=6.1e-12 Score=85.18 Aligned_cols=113 Identities=19% Similarity=0.351 Sum_probs=87.2
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC-c-------ceee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS-G-------QCEQ 73 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~-~-------~~~~ 73 (131)
+|.|||..++.+. +..+.+||.+ |..+.++++|.+.|.+++|+.+|+.+++|+.|..+.+|+..- | ..++
T Consensus 19 afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQ 97 (1081)
T KOG1538|consen 19 AFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQ 97 (1081)
T ss_pred EECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeee
Confidence 5789999888875 4579999987 889999999999999999999999999999999999998652 2 1111
Q ss_pred ee-----------------------------ecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 74 QF-----------------------------SFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 74 ~~-----------------------------~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
.+ ......+.+.+|..||+ ++.|-.+|+|.+-+- ++++-..++
T Consensus 98 CMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~ 170 (1081)
T KOG1538|consen 98 CMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIE 170 (1081)
T ss_pred EeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEe
Confidence 11 01124578888999988 788999999998764 344434443
No 181
>KOG0974|consensus
Probab=99.41 E-value=4.7e-12 Score=88.32 Aligned_cols=115 Identities=21% Similarity=0.326 Sum_probs=96.2
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCC-CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceee-eeecCCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDG-SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ-QFSFHSAP 81 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~-~~~~~~~~ 81 (131)
++++.-++++|+.-+.|.+|.... +....+.+|.+.+..+.++.+|+++++.+.|+++++|++.+.+... ...+|..+
T Consensus 141 ~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaR 220 (967)
T KOG0974|consen 141 DSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSAR 220 (967)
T ss_pred ccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccce
Confidence 456677889999999999999762 2223688999999999999999999999999999999999987765 66679999
Q ss_pred eEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEeccc
Q psy3840 82 ALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120 (131)
Q Consensus 82 v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~ 120 (131)
++.+++.|+ ++++++.|.+.++|+.. +..+..+..|.
T Consensus 221 vw~~~~~~n-~i~t~gedctcrvW~~~-~~~l~~y~~h~ 257 (967)
T KOG0974|consen 221 VWACCFLPN-RIITVGEDCTCRVWGVN-GTQLEVYDEHS 257 (967)
T ss_pred eEEEEeccc-eeEEeccceEEEEEecc-cceehhhhhhh
Confidence 999999998 89999999999999654 44445555543
No 182
>KOG2919|consensus
Probab=99.41 E-value=3.1e-12 Score=79.82 Aligned_cols=117 Identities=17% Similarity=0.243 Sum_probs=91.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC--CC--ceeec-----ccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCccee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD--GS--LKSTL-----GQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCE 72 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~--~~--~~~~~-----~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~ 72 (131)
.|+|||.+|++|- ...|++||+. |. .+... .+..+-+.+++|+| +...++.++....+-|+.-..+.++
T Consensus 165 ~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl 243 (406)
T KOG2919|consen 165 QFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPL 243 (406)
T ss_pred EecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCce
Confidence 5899999999985 6689999985 22 22222 23367889999999 6668999999999999988888889
Q ss_pred eeeecCCCCeEEEEEcCCCc-EEEEeC-CCcEEEEeCCCC-eeeEEEeccc
Q psy3840 73 QQFSFHSAPALDVDWQSNTS-FASCST-DQHIHVCKLHSD-KPVKSFEGHT 120 (131)
Q Consensus 73 ~~~~~~~~~v~~~~~~~~~~-~~~~~~-d~~i~i~d~~~~-~~~~~~~~~~ 120 (131)
..+.+|.+.|+.+.|+++|. +.+|.. +.+|..||+|.. .++..+..|.
T Consensus 244 ~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv 294 (406)
T KOG2919|consen 244 QLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHV 294 (406)
T ss_pred eeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhc
Confidence 99999999999999999976 777654 678999999854 4555554443
No 183
>KOG2055|consensus
Probab=99.41 E-value=6e-12 Score=81.45 Aligned_cols=105 Identities=14% Similarity=0.287 Sum_probs=86.4
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC-C
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA-P 81 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~ 81 (131)
.++++++|+..+..|.|++.... +..+..++ -.+.+..+.|+.+++.++..+.+|.|.+||++...++..+..... .
T Consensus 311 VShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~ 389 (514)
T KOG2055|consen 311 VSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVH 389 (514)
T ss_pred ecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccc
Confidence 47899999999999999998876 44444443 578899999999999999999999999999999988888875432 2
Q ss_pred eEEEEEcCCCc-EEEEeCCCcEEEEeCCC
Q psy3840 82 ALDVDWQSNTS-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 82 v~~~~~~~~~~-~~~~~~d~~i~i~d~~~ 109 (131)
-++++.++++. +++|+..|.|.|||.++
T Consensus 390 gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 390 GTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred eeeeeecCCCceEEeccCcceEEEeccch
Confidence 35667778877 89999999999999654
No 184
>KOG1063|consensus
Probab=99.40 E-value=3.3e-12 Score=86.07 Aligned_cols=106 Identities=16% Similarity=0.220 Sum_probs=85.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCC-----ceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc--ceeee-
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGS-----LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG--QCEQQ- 74 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~--~~~~~- 74 (131)
.||||+++|++.++|.++.+|..... .....+.|..-|+...|+|++.++++++.|.++++|..... +.+..
T Consensus 579 ~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~ 658 (764)
T KOG1063|consen 579 AFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRF 658 (764)
T ss_pred EECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhh
Confidence 58999999999999999999987521 12336789999999999999999999999999999998876 44333
Q ss_pred -eecCCCCeEEEEEcCC-----C-cEEEEeCCCcEEEEeCC
Q psy3840 75 -FSFHSAPALDVDWQSN-----T-SFASCSTDQHIHVCKLH 108 (131)
Q Consensus 75 -~~~~~~~v~~~~~~~~-----~-~~~~~~~d~~i~i~d~~ 108 (131)
...+..+|+++++.|- + .++.|-..|.|.+|...
T Consensus 659 a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 659 ACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred chhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 2235678999999762 2 25788889999999854
No 185
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.40 E-value=7.1e-11 Score=76.65 Aligned_cols=121 Identities=30% Similarity=0.502 Sum_probs=95.7
Q ss_pred cccCCCCEEEEEeC-CCeEEEEcCC-CCceeecccccccEEEEEEcCCCC-EEEEEeCCCcEEEEECCCcceee-eeecC
Q psy3840 3 SSRNNGSFLATGSY-DGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAASGQCEQ-QFSFH 78 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~~-~~~~~ 78 (131)
.++|++..++.++. ++.+++|+.. +..+..+.+|...+.+++|+|++. .+++++.|+.+++||...+.... .+..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~ 241 (466)
T COG2319 162 AFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGH 241 (466)
T ss_pred EECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCC
Confidence 47888888888886 9999999987 577788888999999999999887 55555899999999988777776 56666
Q ss_pred CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCee-eEEEecccceEE
Q psy3840 79 SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKP-VKSFEGHTRVYY 124 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~ 124 (131)
.... ...|+|++. +++++.|+.+++|+++.... +..+..|...+.
T Consensus 242 ~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~ 288 (466)
T COG2319 242 SDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVL 288 (466)
T ss_pred Ccce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEE
Confidence 6664 337899875 78899999999999987654 444445544443
No 186
>KOG4378|consensus
Probab=99.40 E-value=2.9e-12 Score=83.88 Aligned_cols=110 Identities=15% Similarity=0.298 Sum_probs=93.0
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCc-eeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC-CCCeEE
Q psy3840 7 NGSFLATGSYDGYARIWTSDGSL-KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH-SAPALD 84 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~-~~~v~~ 84 (131)
...++++|+..+.|+|||++.+. .+.+++|+..|+++.++-...++++++..|.|.+..+.++.....+... ...+.-
T Consensus 90 ~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRl 169 (673)
T KOG4378|consen 90 QSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRL 169 (673)
T ss_pred cceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEE
Confidence 34789999999999999998554 4567899999999999999999999999999999999998877777755 345668
Q ss_pred EEEcCCCc--EEEEeCCCcEEEEeCCCCeeeEEE
Q psy3840 85 VDWQSNTS--FASCSTDQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 85 ~~~~~~~~--~~~~~~d~~i~i~d~~~~~~~~~~ 116 (131)
+.|+|..+ |.+++.+|.|.+||+....++..+
T Consensus 170 l~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~ 203 (673)
T KOG4378|consen 170 LRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHA 203 (673)
T ss_pred eecccccceeeEeeccCCeEEEEeccCCCcccch
Confidence 89999866 678899999999999877776655
No 187
>KOG0642|consensus
Probab=99.39 E-value=6.2e-12 Score=82.96 Aligned_cols=65 Identities=26% Similarity=0.468 Sum_probs=56.2
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-----------CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-----------GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 68 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-----------~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 68 (131)
.+++++.+++|+.||+|+.|++. ......+.+|++.++.+++++....+++++.||++++|+...
T Consensus 352 v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~ 427 (577)
T KOG0642|consen 352 VPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTE 427 (577)
T ss_pred ecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCC
Confidence 56789999999999999999754 133456789999999999999888899999999999998754
No 188
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.39 E-value=5.5e-11 Score=77.19 Aligned_cols=118 Identities=23% Similarity=0.456 Sum_probs=97.7
Q ss_pred cCCCC-EEEEEeC-CCeEEEEcCCC--CceeecccccccEEEEEEcCCCCEEEEEeC-CCcEEEEECCCcceeeeeecCC
Q psy3840 5 RNNGS-FLATGSY-DGYARIWTSDG--SLKSTLGQHKGPIFALKWNKRGNYILSAGV-DKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 5 ~~~~~-~l~~~~~-d~~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
++++. .++..+. |+.+.+|+... .....+..|...+..+.|+|++..+++++. ++.+++|+...++.+..+..|.
T Consensus 119 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (466)
T COG2319 119 SPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHT 198 (466)
T ss_pred CCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCC
Confidence 45555 4555445 89999999884 777888899999999999999998888885 9999999999988888888888
Q ss_pred CCeEEEEEcCCCc-EEEE-eCCCcEEEEeCCCCeeeE-EEecccce
Q psy3840 80 APALDVDWQSNTS-FASC-STDQHIHVCKLHSDKPVK-SFEGHTRV 122 (131)
Q Consensus 80 ~~v~~~~~~~~~~-~~~~-~~d~~i~i~d~~~~~~~~-~~~~~~~~ 122 (131)
..+.+++|+|++. ++.+ +.|+.+++||.+.+..+. .+..|...
T Consensus 199 ~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 244 (466)
T COG2319 199 DPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDS 244 (466)
T ss_pred CceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcc
Confidence 9999999999875 4444 899999999998777777 57777655
No 189
>KOG4227|consensus
Probab=99.36 E-value=2e-11 Score=78.19 Aligned_cols=109 Identities=17% Similarity=0.265 Sum_probs=90.4
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-------CCceeecc-cccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-------GSLKSTLG-QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ 74 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-------~~~~~~~~-~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 74 (131)
.|+.++++|++|+.|..+++|++. .+++.... .|...|.|++|......+++|+.++++...|+.+.+.+..
T Consensus 63 qFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V 142 (609)
T KOG4227|consen 63 QFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYV 142 (609)
T ss_pred eeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeee
Confidence 478889999999999999999976 23443332 3558999999999999999999999999999999988777
Q ss_pred eec--CCCCeEEEEEcCC-CcEEEEeCCCcEEEEeCCCCe
Q psy3840 75 FSF--HSAPALDVDWQSN-TSFASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 75 ~~~--~~~~v~~~~~~~~-~~~~~~~~d~~i~i~d~~~~~ 111 (131)
+.. ..+.|..+..+|- +.+++.+.++.|.+||.+..+
T Consensus 143 ~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 143 ANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ 182 (609)
T ss_pred ecccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence 654 3458999999996 558999999999999998654
No 190
>KOG0307|consensus
Probab=99.35 E-value=3.7e-12 Score=89.53 Aligned_cols=108 Identities=23% Similarity=0.413 Sum_probs=92.1
Q ss_pred cccCCC-CEEEEEeCCC---eEEEEcCC--CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcceeeee
Q psy3840 3 SSRNNG-SFLATGSYDG---YARIWTSD--GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCEQQF 75 (131)
Q Consensus 3 ~~~~~~-~~l~~~~~d~---~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 75 (131)
+|+|+. ..+++++.|. .|.+||++ ..+++++.+|...|.+|.|++ |.+++++++.|+.+.+|+.++++.+..+
T Consensus 213 ~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~ 292 (1049)
T KOG0307|consen 213 AWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGEL 292 (1049)
T ss_pred eeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeec
Confidence 466654 5666666644 48899987 677888899999999999999 5589999999999999999999999999
Q ss_pred ecCCCCeEEEEEcCC--CcEEEEeCCCcEEEEeCCCC
Q psy3840 76 SFHSAPALDVDWQSN--TSFASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~--~~~~~~~~d~~i~i~d~~~~ 110 (131)
.....-+..+.|+|. +.++.++-||.|.||.+...
T Consensus 293 p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~ 329 (1049)
T KOG0307|consen 293 PAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGT 329 (1049)
T ss_pred CCCCcceeeeeecCCCcchhhhheeccceeeeeeecC
Confidence 987788999999997 35888899999999998754
No 191
>KOG1963|consensus
Probab=99.35 E-value=2.2e-11 Score=83.67 Aligned_cols=114 Identities=22% Similarity=0.420 Sum_probs=91.6
Q ss_pred ccccCCCCEEEEEeCCCeEEEEcCCC-----CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee
Q psy3840 2 QSSRNNGSFLATGSYDGYARIWTSDG-----SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 76 (131)
Q Consensus 2 ~~~~~~~~~l~~~~~d~~i~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 76 (131)
.+++|+++++++|..||.|.+|.-.+ .....+.=|...|.++.|+++|.++++|+..+.+-+|.+.+++ ..-++
T Consensus 211 ~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLP 289 (792)
T KOG1963|consen 211 VALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLP 289 (792)
T ss_pred EEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-ccccc
Confidence 46799999999999999999996432 2223444588899999999999999999999999999999987 34455
Q ss_pred cCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEE
Q psy3840 77 FHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~ 116 (131)
.-..++..+.++||+. .+....|+.|.+....+.....++
T Consensus 290 RLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tI 330 (792)
T KOG1963|consen 290 RLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTI 330 (792)
T ss_pred ccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhc
Confidence 5678899999999977 677788999998877554444443
No 192
>KOG1523|consensus
Probab=99.34 E-value=3e-11 Score=75.21 Aligned_cols=107 Identities=20% Similarity=0.333 Sum_probs=90.9
Q ss_pred ccccCCCCEEEEEeCCCeEEEEcCC----CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc---ceeee
Q psy3840 2 QSSRNNGSFLATGSYDGYARIWTSD----GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG---QCEQQ 74 (131)
Q Consensus 2 ~~~~~~~~~l~~~~~d~~i~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~---~~~~~ 74 (131)
.+|++|+..+|++.++..|.||... -+..+++..|...++.++|+|..+.+++++.|..-++|...++ ++.-.
T Consensus 16 hAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~Wkptlv 95 (361)
T KOG1523|consen 16 HAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLV 95 (361)
T ss_pred eeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeecccee
Confidence 3689999999999999999999865 3457888999999999999999999999999999999998543 33444
Q ss_pred eecCCCCeEEEEEcCCC-cEEEEeCCCcEEEEeCC
Q psy3840 75 FSFHSAPALDVDWQSNT-SFASCSTDQHIHVCKLH 108 (131)
Q Consensus 75 ~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~i~d~~ 108 (131)
+..++...+++.|+|.. ++++|+..+.|.||-.+
T Consensus 96 LlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E 130 (361)
T KOG1523|consen 96 LLRINRAATCVKWSPKENKFAVGSGARLISVCYYE 130 (361)
T ss_pred EEEeccceeeEeecCcCceEEeccCccEEEEEEEe
Confidence 55577889999999974 59999999999998765
No 193
>KOG2445|consensus
Probab=99.33 E-value=3.5e-11 Score=74.65 Aligned_cols=113 Identities=18% Similarity=0.288 Sum_probs=84.1
Q ss_pred CCEEEEEeCC-----CeEEEEcCC--C---CceeecccccccEEEEEEcCC----CCEEEEEeCCCcEEEEECCCc----
Q psy3840 8 GSFLATGSYD-----GYARIWTSD--G---SLKSTLGQHKGPIFALKWNKR----GNYILSAGVDKTTIIWDAASG---- 69 (131)
Q Consensus 8 ~~~l~~~~~d-----~~i~~~~~~--~---~~~~~~~~~~~~i~~~~~~~~----~~~~~s~~~d~~i~~~d~~~~---- 69 (131)
.++|++|+.+ +.+.||... + ..+.++.+|+.+|+.++|.|+ ..++++++.|| |+||.+...
T Consensus 184 ~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i 262 (361)
T KOG2445|consen 184 EPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAI 262 (361)
T ss_pred CceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchh
Confidence 4678888765 367888654 3 234567789999999999993 34789999999 999998731
Q ss_pred ----------------ceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCC---CCeeeEEEecccc
Q psy3840 70 ----------------QCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLH---SDKPVKSFEGHTR 121 (131)
Q Consensus 70 ----------------~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~---~~~~~~~~~~~~~ 121 (131)
+.+..+..|.++|+.+.|+=.|. |.+.+.||.|++|... ..++...++....
T Consensus 263 ~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~sv~~~e~~ 334 (361)
T KOG2445|consen 263 EEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCTSVLKAEGS 334 (361)
T ss_pred hhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheeeeEEeccCC
Confidence 23445667889999999988877 8888999999999643 2356665554433
No 194
>KOG4547|consensus
Probab=99.32 E-value=1.6e-10 Score=76.66 Aligned_cols=119 Identities=17% Similarity=0.220 Sum_probs=102.1
Q ss_pred CCCCEEEEEeCCCeEEEEcCC-CCceeec--ccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 6 NNGSFLATGSYDGYARIWTSD-GSLKSTL--GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~-~~~~~~~--~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
.+...++-|...|.|-+|++. ++....+ ..|.+++.++.++.+-..+.+++.|..+..|+..+...++.+......+
T Consensus 68 ~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~ 147 (541)
T KOG4547|consen 68 LDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLV 147 (541)
T ss_pred CCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCcc
Confidence 345677888889999999987 5554444 4689999999998888899999999999999999999999999888889
Q ss_pred EEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEEE
Q psy3840 83 LDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 83 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 126 (131)
.+++.+||+. +++++ ++|.+||+++++.+.++.+|.+++..+
T Consensus 148 ~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~ 190 (541)
T KOG4547|consen 148 SSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTL 190 (541)
T ss_pred ceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEE
Confidence 9999999977 55554 689999999999999999999988654
No 195
>KOG1188|consensus
Probab=99.32 E-value=2.7e-11 Score=75.92 Aligned_cols=80 Identities=15% Similarity=0.252 Sum_probs=64.6
Q ss_pred cccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcc----eeeeeecCCCCeEEEEEcCCC--cEEEEeCCCcEEEEeC
Q psy3840 35 QHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQ----CEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKL 107 (131)
Q Consensus 35 ~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~----~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~i~i~d~ 107 (131)
.|.+.|++++|+| +.+++++|+.||-+.+||+.... .+..+ .+...|..+.|..++ ++.+-++.....+|++
T Consensus 163 SH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~vi-N~~sSI~~igw~~~~ykrI~clTH~Etf~~~el 241 (376)
T KOG1188|consen 163 SHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVI-NHGSSIHLIGWLSKKYKRIMCLTHMETFAIYEL 241 (376)
T ss_pred hccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhh-cccceeeeeeeecCCcceEEEEEccCceeEEEc
Confidence 4788999999999 78899999999999999987542 22223 245679999999886 5888899999999999
Q ss_pred CCCeeeEE
Q psy3840 108 HSDKPVKS 115 (131)
Q Consensus 108 ~~~~~~~~ 115 (131)
+.+.+...
T Consensus 242 e~~~~~~~ 249 (376)
T KOG1188|consen 242 EDGSEETW 249 (376)
T ss_pred cCCChhhc
Confidence 88765443
No 196
>KOG2695|consensus
Probab=99.32 E-value=1.4e-11 Score=77.47 Aligned_cols=117 Identities=12% Similarity=0.132 Sum_probs=89.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC----CC-ceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcce---eee
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD----GS-LKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQC---EQQ 74 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~----~~-~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~---~~~ 74 (131)
|.-.++++..|+.+|.|..+|+. |. -.....-|+..|+++.... +++.+.+.+.+|+|++||++--++ +..
T Consensus 260 f~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~q 339 (425)
T KOG2695|consen 260 FAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQ 339 (425)
T ss_pred hcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceee
Confidence 55668999999999999999986 11 1223334888999998776 888899999999999999997666 777
Q ss_pred eecCCCCeE--EEEEcCC-CcEEEEeCCCcEEEEeCCCCeeeEEEeccc
Q psy3840 75 FSFHSAPAL--DVDWQSN-TSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120 (131)
Q Consensus 75 ~~~~~~~v~--~~~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~ 120 (131)
+.+|...-. -+...++ +.++++++|...+||.++.++.+.++....
T Consensus 340 YeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~ 388 (425)
T KOG2695|consen 340 YEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPY 388 (425)
T ss_pred eecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCCC
Confidence 777654322 2233444 558889999999999999999988875443
No 197
>KOG1524|consensus
Probab=99.30 E-value=4.3e-11 Score=79.23 Aligned_cols=116 Identities=20% Similarity=0.335 Sum_probs=93.6
Q ss_pred CCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEE
Q psy3840 8 GSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDW 87 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 87 (131)
...++.+++||.+.+.+-.++.......|.+.+.+-.|+|+|.-+++++.||.|++|. ++|....++.....+|.|++|
T Consensus 75 ~d~~~i~s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W 153 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARW 153 (737)
T ss_pred cceEEEEcCCceEEEecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEE
Confidence 4678888999999999988888888999999999999999999999999999999998 677666666667789999999
Q ss_pred cCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 88 QSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 88 ~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
.|+.. ++- +..+.+.|=-+.....+..++.|.+.+-+
T Consensus 154 ~p~S~~vl~-c~g~h~~IKpL~~n~k~i~WkAHDGiiL~ 191 (737)
T KOG1524|consen 154 APNSNSIVF-CQGGHISIKPLAANSKIIRWRAHDGLVLS 191 (737)
T ss_pred CCCCCceEE-ecCCeEEEeecccccceeEEeccCcEEEE
Confidence 99865 333 23345666566666677777888776643
No 198
>KOG0290|consensus
Probab=99.29 E-value=1.2e-10 Score=71.90 Aligned_cols=102 Identities=26% Similarity=0.492 Sum_probs=78.9
Q ss_pred CEEEEEeCCCeEEEEcCCC--Cce--------eecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcce---eee
Q psy3840 9 SFLATGSYDGYARIWTSDG--SLK--------STLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQC---EQQ 74 (131)
Q Consensus 9 ~~l~~~~~d~~i~~~~~~~--~~~--------~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~---~~~ 74 (131)
++||+.+ ..+|+|.+.. ..+ .+-..+..++++..|+. +.+++.+.+-|-+..+||++++.. ...
T Consensus 114 dlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQ 191 (364)
T KOG0290|consen 114 DLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQ 191 (364)
T ss_pred chhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeE
Confidence 4566653 4699998751 111 11123567999999998 888999999999999999998633 445
Q ss_pred eecCCCCeEEEEEcCCCc--EEEEeCCCcEEEEeCCCCee
Q psy3840 75 FSFHSAPALDVDWQSNTS--FASCSTDQHIHVCKLHSDKP 112 (131)
Q Consensus 75 ~~~~~~~v~~~~~~~~~~--~~~~~~d~~i~i~d~~~~~~ 112 (131)
+..|..+|..++|..++. +++.+.||.+++||+|..+.
T Consensus 192 LIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leH 231 (364)
T KOG0290|consen 192 LIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEH 231 (364)
T ss_pred EEecCcceeEEEeccCccceEEEecCCCcEEEEEeccccc
Confidence 667889999999998754 89999999999999997644
No 199
>KOG2106|consensus
Probab=99.28 E-value=6.2e-10 Score=73.32 Aligned_cols=112 Identities=17% Similarity=0.282 Sum_probs=87.7
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc-ceeeee-ecCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG-QCEQQF-SFHSA 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~-~~~~~~-~~~~~ 80 (131)
.|+|.| .++.|...|...+.|.+...+..+...+.++.+++|+|+|..++.|+.|+.|++|.+..+ ...... ..+..
T Consensus 414 ~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs 492 (626)
T KOG2106|consen 414 DFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGS 492 (626)
T ss_pred eccCcc-eEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCc
Confidence 488988 999999999999999886555555555889999999999999999999999999998754 333222 23347
Q ss_pred CeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEE
Q psy3840 81 PALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKS 115 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~ 115 (131)
+++.+.|++|++ +.+-+.|-.|..|.....+.+..
T Consensus 493 ~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts 528 (626)
T KOG2106|consen 493 PITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITS 528 (626)
T ss_pred eeEEeeecCCCceEEeccCceEEEEEccccCcccce
Confidence 899999999988 67777788899995444444433
No 200
>KOG1517|consensus
Probab=99.27 E-value=1.1e-10 Score=82.51 Aligned_cols=111 Identities=21% Similarity=0.288 Sum_probs=83.7
Q ss_pred cCCCCEEEEEeCCCeEEEEcCC----CCceeeccccccc--EEEEEEcCCCC-EEEEEeCCCcEEEEECCCccee--eee
Q psy3840 5 RNNGSFLATGSYDGYARIWTSD----GSLKSTLGQHKGP--IFALKWNKRGN-YILSAGVDKTTIIWDAASGQCE--QQF 75 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~----~~~~~~~~~~~~~--i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~--~~~ 75 (131)
...|+.+++|..||.|++||.. ...+...+.|+.. |..+.+.++|- .+++|+.+|.|++||++..... ..+
T Consensus 1218 ~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~i 1297 (1387)
T KOG1517|consen 1218 LVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTI 1297 (1387)
T ss_pred ccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCccccccee
Confidence 4458999999999999999976 3456677788877 99999998665 4999999999999999974222 122
Q ss_pred ecC---CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 76 SFH---SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 76 ~~~---~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
..+ .+..+++..++... +++|+. +.|.||++. |+.+..+.
T Consensus 1298 v~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~k 1341 (1387)
T KOG1517|consen 1298 VAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNIIK 1341 (1387)
T ss_pred eeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhcccc
Confidence 222 22488999998866 666666 999999986 55555444
No 201
>KOG1240|consensus
Probab=99.27 E-value=4.3e-10 Score=80.41 Aligned_cols=114 Identities=13% Similarity=0.182 Sum_probs=86.9
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC---CC-----ceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC--cce--
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD---GS-----LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS--GQC-- 71 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~---~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~--~~~-- 71 (131)
.++++.++++|+.||+|++|+.. ++ ...++..-...+.++...+.+..++.++.||.|.+.++.. .+.
T Consensus 1057 s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~ 1136 (1431)
T KOG1240|consen 1057 SSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRV 1136 (1431)
T ss_pred cCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccce
Confidence 45667999999999999999976 22 1223333456889999999999999999999999988764 110
Q ss_pred ---------------ee---------e---------------------------eecCCCCeEEEEEcCCCc-EEEEeCC
Q psy3840 72 ---------------EQ---------Q---------------------------FSFHSAPALDVDWQSNTS-FASCSTD 99 (131)
Q Consensus 72 ---------------~~---------~---------------------------~~~~~~~v~~~~~~~~~~-~~~~~~d 99 (131)
+. . .....+.|++++.+|.+. +++|+..
T Consensus 1137 ~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~ 1216 (1431)
T KOG1240|consen 1137 ATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSR 1216 (1431)
T ss_pred eeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCC
Confidence 00 0 011246789999999877 8899999
Q ss_pred CcEEEEeCCCCeeeEEEe
Q psy3840 100 QHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 100 ~~i~i~d~~~~~~~~~~~ 117 (131)
|.+.+||+|-+.++.++.
T Consensus 1217 G~l~lWDLRF~~~i~sw~ 1234 (1431)
T KOG1240|consen 1217 GQLVLWDLRFRVPILSWE 1234 (1431)
T ss_pred ceEEEEEeecCceeeccc
Confidence 999999999988888775
No 202
>KOG0650|consensus
Probab=99.26 E-value=3.3e-11 Score=80.50 Aligned_cols=103 Identities=24% Similarity=0.310 Sum_probs=86.9
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECC------Ccc---e
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA------SGQ---C 71 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~------~~~---~ 71 (131)
+.+|.|..|+.|+.|+.+..||+. .++..++.-|...+++++|++.-.++++++.||++.++.-. .+. +
T Consensus 614 sihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVP 693 (733)
T KOG0650|consen 614 SIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVP 693 (733)
T ss_pred eecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEe
Confidence 468899999999999999999987 67889999999999999999999999999999999988432 222 3
Q ss_pred eeeeecCCC----CeEEEEEcCCCc-EEEEeCCCcEEEE
Q psy3840 72 EQQFSFHSA----PALDVDWQSNTS-FASCSTDQHIHVC 105 (131)
Q Consensus 72 ~~~~~~~~~----~v~~~~~~~~~~-~~~~~~d~~i~i~ 105 (131)
+..+++|.. .|....|+|..- +++++.|++|++|
T Consensus 694 lK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 694 LKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 455666654 488889999865 8999999999998
No 203
>KOG0280|consensus
Probab=99.26 E-value=2e-10 Score=70.99 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=87.1
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-C--CceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECC-Ccceeee-eec
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-G--SLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAA-SGQCEQQ-FSF 77 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~--~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~-~~~~~~~-~~~ 77 (131)
|++.+..++++..+|.+.+-+.. . +.+...+.|+-.++...|+. +.+.+.+|+.|+.+..||++ .++.+.. .+.
T Consensus 129 ~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kv 208 (339)
T KOG0280|consen 129 ISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKV 208 (339)
T ss_pred eeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeeccee
Confidence 56778889999999999854433 2 23346788999999999987 67899999999999999999 3444443 456
Q ss_pred CCCCeEEEEEcCC-Cc-EEEEeCCCcEEEEeCCC-CeeeE
Q psy3840 78 HSAPALDVDWQSN-TS-FASCSTDQHIHVCKLHS-DKPVK 114 (131)
Q Consensus 78 ~~~~v~~~~~~~~-~~-~~~~~~d~~i~i~d~~~-~~~~~ 114 (131)
|...|.+|.-+|. .. +++|+.|..|++||+|+ ++++.
T Consensus 209 H~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~ 248 (339)
T KOG0280|consen 209 HTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLF 248 (339)
T ss_pred eecceEEEecCCCCCceEEEeccccceeeeehhcccCccc
Confidence 7888999998876 44 89999999999999994 45543
No 204
>KOG0644|consensus
Probab=99.24 E-value=2.5e-12 Score=88.52 Aligned_cols=97 Identities=26% Similarity=0.457 Sum_probs=89.6
Q ss_pred eeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCC
Q psy3840 30 KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLH 108 (131)
Q Consensus 30 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~ 108 (131)
+..+.+|-..|.|+.|+..|.++++|+.|..+++|...+..++....+|.+.++.++.+.++. +++++.|..|++|.+.
T Consensus 183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~ 262 (1113)
T KOG0644|consen 183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLP 262 (1113)
T ss_pred HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecC
Confidence 456678999999999999999999999999999999999999999999999999999988766 7899999999999999
Q ss_pred CCeeeEEEecccceEEEE
Q psy3840 109 SDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~ 126 (131)
.+.++..+.+|.+.++.+
T Consensus 263 ~~~pvsvLrghtgavtai 280 (1113)
T KOG0644|consen 263 DGAPVSVLRGHTGAVTAI 280 (1113)
T ss_pred CCchHHHHhccccceeee
Confidence 999999999999887654
No 205
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.24 E-value=3.6e-11 Score=53.48 Aligned_cols=38 Identities=29% Similarity=0.606 Sum_probs=35.7
Q ss_pred CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy3840 28 SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65 (131)
Q Consensus 28 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d 65 (131)
+++..+.+|.+.|.+++|+|++..+++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 46778899999999999999999999999999999997
No 206
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.24 E-value=4.8e-10 Score=74.73 Aligned_cols=105 Identities=15% Similarity=0.179 Sum_probs=70.7
Q ss_pred cccCCCCEEEEEeCC---CeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEe-CCCcEEE--EECCCcceeeeee
Q psy3840 3 SSRNNGSFLATGSYD---GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTII--WDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d---~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~--~d~~~~~~~~~~~ 76 (131)
.|+|+|+.|+..+.+ ..|.+||+.+.....+....+.....+|+|+|+.++.+. .+|.+.+ ||+.+++. ..+.
T Consensus 210 ~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt 288 (429)
T PRK01742 210 AWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLT 288 (429)
T ss_pred eEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-Eeec
Confidence 589999999887653 369999987433222222233345689999999888764 5776555 46655543 4455
Q ss_pred cCCCCeEEEEEcCCCc-EEE-EeCCCcEEEEeCC
Q psy3840 77 FHSAPALDVDWQSNTS-FAS-CSTDQHIHVCKLH 108 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~-~~~d~~i~i~d~~ 108 (131)
.+...+....|+|+++ ++. +..++...+|++.
T Consensus 289 ~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~ 322 (429)
T PRK01742 289 SGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMS 322 (429)
T ss_pred cCCCCcCCEEECCCCCEEEEEECCCCCceEEEEE
Confidence 5556678899999987 544 4456777777764
No 207
>KOG3914|consensus
Probab=99.23 E-value=1e-10 Score=74.53 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=77.8
Q ss_pred EEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee-cCCCCeEEEEEcCCCcEEEEeC
Q psy3840 20 ARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS-FHSAPALDVDWQSNTSFASCST 98 (131)
Q Consensus 20 i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~ 98 (131)
+.+|+.........-+|-.-+..++++||++.+++++.|..|++-.....-.+..+. +|+.-|..++..++..|++++.
T Consensus 134 ~di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sG 213 (390)
T KOG3914|consen 134 FDILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSG 213 (390)
T ss_pred eeeecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCC
Confidence 333443323334456799999999999999999999999999987776655555554 5888899999988877999999
Q ss_pred CCcEEEEeCCCCeeeEEEe
Q psy3840 99 DQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 99 d~~i~i~d~~~~~~~~~~~ 117 (131)
|+++++||+++|+++.++.
T Consensus 214 D~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 214 DKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred CCcEEEEecccCCcccccc
Confidence 9999999999999886654
No 208
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.22 E-value=2e-09 Score=71.92 Aligned_cols=109 Identities=16% Similarity=0.182 Sum_probs=76.9
Q ss_pred cccCCCCEEEEEeC---CCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEE-EEeCCCc--EEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLATGSY---DGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYIL-SAGVDKT--TIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~---d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-s~~~d~~--i~~~d~~~~~~~~~~~ 76 (131)
.|+|||+.|+..+. +..|.+||+.+.....+..+.+.+...+|+|+|+.++ +.+.++. |++||+.+++. ..+.
T Consensus 208 ~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt 286 (435)
T PRK05137 208 RFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLT 286 (435)
T ss_pred EECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEcc
Confidence 58999999988764 3579999998555555556667778889999998765 5555554 77778887765 3444
Q ss_pred cCCCCeEEEEEcCCCc-EEEEe-CCC--cEEEEeCCCCee
Q psy3840 77 FHSAPALDVDWQSNTS-FASCS-TDQ--HIHVCKLHSDKP 112 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~-~d~--~i~i~d~~~~~~ 112 (131)
.+........|+|+++ ++..+ .++ .|+++|+.+++.
T Consensus 287 ~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~ 326 (435)
T PRK05137 287 DSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP 326 (435)
T ss_pred CCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe
Confidence 4444566789999987 55444 333 688888876543
No 209
>KOG0771|consensus
Probab=99.22 E-value=8.6e-11 Score=75.18 Aligned_cols=76 Identities=20% Similarity=0.277 Sum_probs=66.4
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 41 FALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 41 ~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
..++|+.+|..+++++.||.+|+|+..+...+.....|+..|.+++|+||++ +++-+.| ..+||+.+++.+++...
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence 6789999999999999999999999877777777778889999999999998 7777888 89999999986655543
No 210
>KOG2139|consensus
Probab=99.22 E-value=1.3e-09 Score=69.25 Aligned_cols=103 Identities=21% Similarity=0.429 Sum_probs=74.6
Q ss_pred cccCCCCEEEEEeC-CCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC
Q psy3840 3 SSRNNGSFLATGSY-DGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (131)
.|++||..+++++. |..|.+||.. +..+.......+.+.-+.|+|++.+++.+.-|+..++|+..............+
T Consensus 202 qwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsg 281 (445)
T KOG2139|consen 202 QWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSG 281 (445)
T ss_pred EEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCC
Confidence 47899999999887 6679999988 333333334556789999999999999999999999997655433333333455
Q ss_pred CeEEEEEcCCCc--EEEEeCCCcEEEEeC
Q psy3840 81 PALDVDWQSNTS--FASCSTDQHIHVCKL 107 (131)
Q Consensus 81 ~v~~~~~~~~~~--~~~~~~d~~i~i~d~ 107 (131)
.|..-.|+|+|+ +++++. .-.+|.+
T Consensus 282 rvqtacWspcGsfLLf~~sg--sp~lysl 308 (445)
T KOG2139|consen 282 RVQTACWSPCGSFLLFACSG--SPRLYSL 308 (445)
T ss_pred ceeeeeecCCCCEEEEEEcC--CceEEEE
Confidence 899999999987 344433 3344443
No 211
>KOG1310|consensus
Probab=99.21 E-value=4.8e-11 Score=79.23 Aligned_cols=80 Identities=26% Similarity=0.410 Sum_probs=70.3
Q ss_pred eeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee-cCCCCeEEEEEcCC--Cc-EEEEeCCCcEEEE
Q psy3840 30 KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS-FHSAPALDVDWQSN--TS-FASCSTDQHIHVC 105 (131)
Q Consensus 30 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~--~~-~~~~~~d~~i~i~ 105 (131)
...+.+|++.|.++.|+.+|.++++|+.|-.+.+||.-..+.+..+. +|...|.+++|-|. .+ +++|..|..|++|
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lf 122 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLF 122 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEE
Confidence 45678999999999999999999999999999999998877776664 68888999999985 33 7899999999999
Q ss_pred eCCC
Q psy3840 106 KLHS 109 (131)
Q Consensus 106 d~~~ 109 (131)
|+..
T Consensus 123 dl~~ 126 (758)
T KOG1310|consen 123 DLDS 126 (758)
T ss_pred eccc
Confidence 9974
No 212
>KOG1523|consensus
Probab=99.20 E-value=1.9e-10 Score=71.72 Aligned_cols=103 Identities=18% Similarity=0.192 Sum_probs=84.1
Q ss_pred ccCCCCEEEEEeCCCeEEEEcC-CC---CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCccee---e-ee
Q psy3840 4 SRNNGSFLATGSYDGYARIWTS-DG---SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE---Q-QF 75 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~-~~---~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~---~-~~ 75 (131)
|+|..++|++++.|..-++|.. ++ ++...+..++...+++.|+|.++.+++|+....|.+|-++....- + .-
T Consensus 63 Wap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhik 142 (361)
T KOG1523|consen 63 WAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIK 142 (361)
T ss_pred ecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhC
Confidence 7888999999999999999997 42 455566778899999999999999999999999998877653321 1 11
Q ss_pred ecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEe
Q psy3840 76 SFHSAPALDVDWQSNTS-FASCSTDQHIHVCK 106 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d 106 (131)
+..+..|.+++|+|++. +++|+.|+..++|.
T Consensus 143 kPirStv~sldWhpnnVLlaaGs~D~k~rVfS 174 (361)
T KOG1523|consen 143 KPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFS 174 (361)
T ss_pred CccccceeeeeccCCcceecccccCcceeEEE
Confidence 23467899999999987 78899999999985
No 213
>KOG0322|consensus
Probab=99.19 E-value=3.5e-11 Score=73.31 Aligned_cols=63 Identities=21% Similarity=0.337 Sum_probs=59.1
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA 66 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~ 66 (131)
+.||++.+|+++.|+.||+|+-+ ..++..++-|.+.|.+++|+|+...++.++.|.+|.+|++
T Consensus 259 IRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 259 IRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred EccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 46899999999999999999976 7888889999999999999999999999999999999986
No 214
>KOG0974|consensus
Probab=99.17 E-value=2.3e-10 Score=80.22 Aligned_cols=103 Identities=19% Similarity=0.292 Sum_probs=85.4
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCce-eecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCC-C
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLK-STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-A 80 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~ 80 (131)
++.||.++++.+.|.++++|++. .+.. ....+|+..++.+.|.|+ .+++++.|.+.++|+.. ++.+..+..|. .
T Consensus 183 ~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~ 259 (967)
T KOG0974|consen 183 TSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGK 259 (967)
T ss_pred EccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhc
Confidence 56799999999999999999987 3333 366789999999999998 99999999999999754 44445666654 4
Q ss_pred CeEEEEEcCCCc-EEEEeCCCcEEEEeCCC
Q psy3840 81 PALDVDWQSNTS-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~ 109 (131)
.++.++..++.. .++++.|+.+++||+..
T Consensus 260 ~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 260 GIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred ceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 689999988765 79999999999999864
No 215
>KOG2111|consensus
Probab=99.17 E-value=2.6e-09 Score=66.69 Aligned_cols=65 Identities=20% Similarity=0.401 Sum_probs=56.1
Q ss_pred ccCCCCEEEEEeCCCe-EEEEcCC-CCceeeccc--ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy3840 4 SRNNGSFLATGSYDGY-ARIWTSD-GSLKSTLGQ--HKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 68 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~-i~~~~~~-~~~~~~~~~--~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 68 (131)
.+.+|.++|+++..|+ ||+||.. |..+.+++. ....|.+++|+|+..++++++..|++++|.++.
T Consensus 189 Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 189 LNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred EcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 5678999999999997 8899987 777777654 335799999999999999999999999998875
No 216
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.17 E-value=5.3e-09 Score=68.41 Aligned_cols=109 Identities=15% Similarity=0.206 Sum_probs=78.2
Q ss_pred CEEE-EEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEE
Q psy3840 9 SFLA-TGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 86 (131)
Q Consensus 9 ~~l~-~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 86 (131)
++++ +-..++.|.+.|.. .+.+.++......-..+.++|+++++++.+.|+.+.++|+.+.+.+..+... .....++
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G-~~~~~i~ 84 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG-GNPRGIA 84 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S-SEEEEEE
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC-CCcceEE
Confidence 4454 45568999999987 5566666654444455779999999999999999999999999999888764 4567899
Q ss_pred EcCCCc-EE-EEeCCCcEEEEeCCCCeeeEEEec
Q psy3840 87 WQSNTS-FA-SCSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 87 ~~~~~~-~~-~~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
++++|+ ++ +.-..+.+.++|.++.+.+..+..
T Consensus 85 ~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~ 118 (369)
T PF02239_consen 85 VSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPT 118 (369)
T ss_dssp E--TTTEEEEEEEETTEEEEEETTT--EEEEEE-
T ss_pred EcCCCCEEEEEecCCCceeEeccccccceeeccc
Confidence 999988 44 445688999999999998887753
No 217
>KOG2139|consensus
Probab=99.16 E-value=2.7e-09 Score=67.90 Aligned_cols=103 Identities=20% Similarity=0.384 Sum_probs=76.9
Q ss_pred ccC-CCCEEEEEeCCCeEEEEcCC-----CCc----------eeecccccccEEEEEEcCCCCEEEEEeC-CCcEEEEEC
Q psy3840 4 SRN-NGSFLATGSYDGYARIWTSD-----GSL----------KSTLGQHKGPIFALKWNKRGNYILSAGV-DKTTIIWDA 66 (131)
Q Consensus 4 ~~~-~~~~l~~~~~d~~i~~~~~~-----~~~----------~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~ 66 (131)
|-| .+..|++|+..| |.+|... +.. +....+| .+|++|+|.+||..+++++- +..|.+||.
T Consensus 148 wRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdp 225 (445)
T KOG2139|consen 148 WRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDP 225 (445)
T ss_pred eccCCcceeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcC
Confidence 444 345778887655 8999765 111 1122334 68999999999999999886 678999999
Q ss_pred CCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCC
Q psy3840 67 ASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLH 108 (131)
Q Consensus 67 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~ 108 (131)
.++..+-......+.+.-+.|+||+. ++++.-|+..++|+..
T Consensus 226 dtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~ 268 (445)
T KOG2139|consen 226 DTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQEN 268 (445)
T ss_pred CCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhc
Confidence 99877655544456788899999987 8888999999999543
No 218
>KOG2321|consensus
Probab=99.15 E-value=1.6e-09 Score=72.37 Aligned_cols=111 Identities=12% Similarity=0.200 Sum_probs=86.8
Q ss_pred cCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeec------
Q psy3840 5 RNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF------ 77 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~------ 77 (131)
.++..++++|+.. .|.=+|+. |..+..+....+.+.++..++...++++|+.+|.+..||.+....+..+..
T Consensus 143 ~~scDly~~gsg~-evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s 221 (703)
T KOG2321|consen 143 KPSCDLYLVGSGS-EVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNS 221 (703)
T ss_pred CCCccEEEeecCc-ceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCC
Confidence 3445566665543 45556766 777777777778999999999999999999999999999998766555432
Q ss_pred C-----CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEE
Q psy3840 78 H-----SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 78 ~-----~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~ 116 (131)
+ ...|+++.|..+|. ++.|+.+|.+.|||+++.+++..-
T Consensus 222 ~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k 266 (703)
T KOG2321|consen 222 HPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK 266 (703)
T ss_pred CccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec
Confidence 1 12499999999887 999999999999999988776553
No 219
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.15 E-value=8.3e-09 Score=68.87 Aligned_cols=109 Identities=17% Similarity=0.161 Sum_probs=72.2
Q ss_pred cccCCCCEEEEEeC---CCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEE-eCCC--cEEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLATGSY---DGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSA-GVDK--TTIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~---d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~-~~d~--~i~~~d~~~~~~~~~~~ 76 (131)
.|+|||+.|+..+. +..+.+|++.+.....+....+......|+|+|+.++.. +.++ .|++||+.+++... +.
T Consensus 205 ~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt 283 (429)
T PRK03629 205 AWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VT 283 (429)
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-cc
Confidence 58999999987543 346888998744444433334445578999999987754 4444 58889998876543 33
Q ss_pred cCCCCeEEEEEcCCCc-EEEEeC-CC--cEEEEeCCCCee
Q psy3840 77 FHSAPALDVDWQSNTS-FASCST-DQ--HIHVCKLHSDKP 112 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~~-d~--~i~i~d~~~~~~ 112 (131)
.....+....|+|+++ ++..+. ++ .|+.+|+.+++.
T Consensus 284 ~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~ 323 (429)
T PRK03629 284 DGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP 323 (429)
T ss_pred CCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe
Confidence 3344677899999987 655443 33 455557766543
No 220
>KOG2321|consensus
Probab=99.14 E-value=7.2e-10 Score=73.99 Aligned_cols=116 Identities=20% Similarity=0.319 Sum_probs=86.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCC-Ccee------ecccccc-----cEEEEEEcCCCCEEEEEeCCCcEEEEECCCcce
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDG-SLKS------TLGQHKG-----PIFALKWNKRGNYILSAGVDKTTIIWDAASGQC 71 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~-~~~~------~~~~~~~-----~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~ 71 (131)
.++-..+|++|+.+|.|..||... ..+. .+..|.+ .|+++.|+.+|-.+++|...|.+.+||++..++
T Consensus 183 in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~p 262 (703)
T KOG2321|consen 183 INEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKP 262 (703)
T ss_pred ecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCc
Confidence 456678999999999999999762 1111 2223333 389999999999999999999999999998877
Q ss_pred eeeee-cCCCCeEEEEEcCCC-c-EEEEeCCCcEEEEeCCCCeeeEEEecc
Q psy3840 72 EQQFS-FHSAPALDVDWQSNT-S-FASCSTDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 72 ~~~~~-~~~~~v~~~~~~~~~-~-~~~~~~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
+..-. ....++..+.|.+.+ + -+.......++|||-.+|++...+..-
T Consensus 263 l~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt 313 (703)
T KOG2321|consen 263 LLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKPMASIEPT 313 (703)
T ss_pred eeecccCCccceeeecccccCCCceEEecchHHhhhcccccCCceeecccc
Confidence 64433 334678899997752 2 344445568999999999988877643
No 221
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.14 E-value=1e-08 Score=68.58 Aligned_cols=108 Identities=14% Similarity=0.129 Sum_probs=73.9
Q ss_pred cccCCCCEEEEEeCC---CeEEEEcCCCCceeecccccccEEEEEEcCCCCEEE-EEeCCC--cEEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLATGSYD---GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYIL-SAGVDK--TTIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d---~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-s~~~d~--~i~~~d~~~~~~~~~~~ 76 (131)
.|+||++.|+..+.. ..|.+||+.+.....+....+.....+|+|+|+.++ +.+.++ .|++||+.+++.. .+.
T Consensus 210 ~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt 288 (433)
T PRK04922 210 AWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLT 288 (433)
T ss_pred cCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeE-ECc
Confidence 589999999887643 368999987544444444455566789999998765 445555 5999999887643 344
Q ss_pred cCCCCeEEEEEcCCCc-EEEEe-CCCc--EEEEeCCCCe
Q psy3840 77 FHSAPALDVDWQSNTS-FASCS-TDQH--IHVCKLHSDK 111 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~-~d~~--i~i~d~~~~~ 111 (131)
.+........|+|+++ ++..+ .++. |+++|+.+++
T Consensus 289 ~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~ 327 (433)
T PRK04922 289 NHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS 327 (433)
T ss_pred cCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 4444456789999987 55444 3443 7777776654
No 222
>KOG1517|consensus
Probab=99.13 E-value=2.2e-09 Score=76.21 Aligned_cols=107 Identities=17% Similarity=0.178 Sum_probs=77.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCCCc-eeec-ccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcc---eeeeeec
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDGSL-KSTL-GQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQ---CEQQFSF 77 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~~~-~~~~-~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~---~~~~~~~ 77 (131)
|......|++++.-..|++||...+. +..+ .+....++++.-+. .|+.++.|-.||.+++||.+... .+...+.
T Consensus 1173 WqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~ 1252 (1387)
T KOG1517|consen 1173 WQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYRE 1252 (1387)
T ss_pred hhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecc
Confidence 44444555555567789999987333 2222 23444667765443 67999999999999999988643 3556666
Q ss_pred CCCC--eEEEEEcCCC--cEEEEeCCCcEEEEeCCCC
Q psy3840 78 HSAP--ALDVDWQSNT--SFASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 78 ~~~~--v~~~~~~~~~--~~~~~~~d~~i~i~d~~~~ 110 (131)
|... |..+.+.++| .+++|+.+|.|++||+|..
T Consensus 1253 h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~ 1289 (1387)
T KOG1517|consen 1253 HNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMS 1289 (1387)
T ss_pred cCCcccceeEEeecCCCcceeeeccCCeEEEEecccC
Confidence 7665 8888898864 4999999999999999973
No 223
>KOG0650|consensus
Probab=99.12 E-value=1e-09 Score=73.64 Aligned_cols=82 Identities=17% Similarity=0.367 Sum_probs=66.3
Q ss_pred CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc--EEEEeCCCcEEEE
Q psy3840 28 SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS--FASCSTDQHIHVC 105 (131)
Q Consensus 28 ~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~d~~i~i~ 105 (131)
.+...+.+|++.+.++..+|.|.++++|+.||++++|.+.++.++..+... ..|.+++|+|.+. +++...+..+.|.
T Consensus 391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d-~~I~~vaw~P~~~~~vLAvA~~~~~~iv 469 (733)
T KOG0650|consen 391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD-SEIRSVAWNPLSDLCVLAVAVGECVLIV 469 (733)
T ss_pred eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec-ceeEEEEecCCCCceeEEEEecCceEEe
Confidence 344567899999999999999999999999999999999999999988754 6899999999754 4444444446666
Q ss_pred eCCCC
Q psy3840 106 KLHSD 110 (131)
Q Consensus 106 d~~~~ 110 (131)
+..-|
T Consensus 470 np~~G 474 (733)
T KOG0650|consen 470 NPIFG 474 (733)
T ss_pred Ccccc
Confidence 65444
No 224
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.12 E-value=3.5e-09 Score=70.67 Aligned_cols=107 Identities=18% Similarity=0.209 Sum_probs=72.3
Q ss_pred cccCCCCEEEEEe-CCCeEEEE--cCCCCceeecccccccEEEEEEcCCCCEEEEE-eCCCcEEEEECCCc-ceeeeeec
Q psy3840 3 SSRNNGSFLATGS-YDGYARIW--TSDGSLKSTLGQHKGPIFALKWNKRGNYILSA-GVDKTTIIWDAASG-QCEQQFSF 77 (131)
Q Consensus 3 ~~~~~~~~l~~~~-~d~~i~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~-~~d~~i~~~d~~~~-~~~~~~~~ 77 (131)
.|+|||+.|+.+. .+|.+.+| |+.+.....+..+...+....|+|+++.++.. ..++...+|++... .....+ .
T Consensus 254 ~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~ 332 (429)
T PRK01742 254 AFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-G 332 (429)
T ss_pred eECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-c
Confidence 5899999988765 57766655 66655566666666778889999999976654 45788888876432 222222 2
Q ss_pred CCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeee
Q psy3840 78 HSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 78 ~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~ 113 (131)
+.. ....|+|+++ ++..+.+ .+.+||+.+++..
T Consensus 333 ~~~--~~~~~SpDG~~ia~~~~~-~i~~~Dl~~g~~~ 366 (429)
T PRK01742 333 GRG--YSAQISADGKTLVMINGD-NVVKQDLTSGSTE 366 (429)
T ss_pred CCC--CCccCCCCCCEEEEEcCC-CEEEEECCCCCeE
Confidence 222 4577999987 6555554 4667999887543
No 225
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.11 E-value=1.2e-08 Score=67.16 Aligned_cols=113 Identities=19% Similarity=0.218 Sum_probs=92.9
Q ss_pred cCCCCEEEEEeCCC-eEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeE
Q psy3840 5 RNNGSFLATGSYDG-YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 83 (131)
Q Consensus 5 ~~~~~~l~~~~~d~-~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~ 83 (131)
..+++-++.|..|| .+-+||..+..+......-+.|.++..+|+|+.++.+.....+.+.|+.++.....-+...+-++
T Consensus 368 ~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lIt 447 (668)
T COG4946 368 QVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLIT 447 (668)
T ss_pred ccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeE
Confidence 34567888899999 79999999888888888888999999999999999999999999999999987655555667899
Q ss_pred EEEEcCCCc-EEEEeCC----CcEEEEeCCCCeeeEEEe
Q psy3840 84 DVDWQSNTS-FASCSTD----QHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 84 ~~~~~~~~~-~~~~~~d----~~i~i~d~~~~~~~~~~~ 117 (131)
.+.|+|+++ ++-+-.+ ..|+++|+..++....-.
T Consensus 448 df~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT 486 (668)
T COG4946 448 DFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT 486 (668)
T ss_pred EEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC
Confidence 999999998 5555444 468999999877665543
No 226
>KOG1587|consensus
Probab=99.11 E-value=9.5e-10 Score=74.62 Aligned_cols=106 Identities=20% Similarity=0.224 Sum_probs=79.7
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCc--ceeeeeecC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASG--QCEQQFSFH 78 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~--~~~~~~~~~ 78 (131)
++|=+..++..+.|-++++|... ..++..+..+...+.+++||| ....++++..+|.+.+||+... .++.+....
T Consensus 406 ~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~ 485 (555)
T KOG1587|consen 406 RNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVC 485 (555)
T ss_pred cCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCccccccc
Confidence 34444444333348899999865 566677777888899999999 6678888999999999999753 344444444
Q ss_pred CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCC
Q psy3840 79 SAPALDVDWQSNTS-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~ 109 (131)
......+.|+++++ ++.|+..|.+++|++..
T Consensus 486 ~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 486 SPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred ccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 55667788888887 88899999999999863
No 227
>KOG0280|consensus
Probab=99.10 E-value=1.5e-09 Score=67.23 Aligned_cols=102 Identities=13% Similarity=0.222 Sum_probs=76.7
Q ss_pred CCCCEEEEEeCCCeEEEEcCC--CCceee-cccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCC-cceeeeeecCCC
Q psy3840 6 NNGSFLATGSYDGYARIWTSD--GSLKST-LGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAAS-GQCEQQFSFHSA 80 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~--~~~~~~-~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~-~~~~~~~~~~~~ 80 (131)
.+.+.+.+|++|+.+..||+. ++.+.. .+.|...|.++.-+| .+.++++|+.|..|++||.++ ++++..-. -.+
T Consensus 176 ~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~G 254 (339)
T KOG0280|consen 176 KEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGG 254 (339)
T ss_pred CCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc-ccc
Confidence 356899999999999999987 444443 567888999998887 788999999999999999995 55554433 347
Q ss_pred CeEEEEEcCCC--c-EEEEeCCCcEEEEeCCC
Q psy3840 81 PALDVDWQSNT--S-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 81 ~v~~~~~~~~~--~-~~~~~~d~~i~i~d~~~ 109 (131)
.|+.+.++|.. + ++++..+| .+|.+...
T Consensus 255 GVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~ 285 (339)
T KOG0280|consen 255 GVWRIKHHPEIFHRLLAACMHNG-AKILDSSD 285 (339)
T ss_pred ceEEEEecchhhhHHHHHHHhcC-ceEEEecc
Confidence 89999999963 3 45554444 45555543
No 228
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.09 E-value=1.5e-08 Score=67.67 Aligned_cols=107 Identities=13% Similarity=0.147 Sum_probs=69.6
Q ss_pred cccCCCCEEEEEeCC---CeEEEEcCCCCceeecccccccEEEEEEcCCCCEEE-EEeCCCcEEEEE--CCCcceeeeee
Q psy3840 3 SSRNNGSFLATGSYD---GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYIL-SAGVDKTTIIWD--AASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d---~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-s~~~d~~i~~~d--~~~~~~~~~~~ 76 (131)
.|+|||+.|+..+.+ ..|.+||+.+.....+....+.+....|+|+|+.++ +.+.++...+|. +..+. ...+.
T Consensus 202 ~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt 280 (427)
T PRK02889 202 AWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLT 280 (427)
T ss_pred eEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECC
Confidence 589999999887643 358999987544444444445667889999998876 566777766654 44443 34444
Q ss_pred cCCCCeEEEEEcCCCc-EEEEe-CCCcEEEE--eCCCC
Q psy3840 77 FHSAPALDVDWQSNTS-FASCS-TDQHIHVC--KLHSD 110 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~-~d~~i~i~--d~~~~ 110 (131)
.+........|+|+++ ++..+ .++...+| ++.++
T Consensus 281 ~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g 318 (427)
T PRK02889 281 QSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGG 318 (427)
T ss_pred CCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCC
Confidence 4444556788999987 55443 34555555 44444
No 229
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.08 E-value=1.5e-08 Score=67.62 Aligned_cols=114 Identities=21% Similarity=0.269 Sum_probs=74.8
Q ss_pred cccCCCCEEEEEe-CCCeEEEE--cCC--CCceeecccccccEEEEEEcCCCCEEEEEeCC---CcEEEEECCCcceeee
Q psy3840 3 SSRNNGSFLATGS-YDGYARIW--TSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVD---KTTIIWDAASGQCEQQ 74 (131)
Q Consensus 3 ~~~~~~~~l~~~~-~d~~i~~~--~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d---~~i~~~d~~~~~~~~~ 74 (131)
.|+|||+.|+..+ .+|...+| ++. +.....+..+...+....|+|+|+.++....+ ..+.+||+.+++...
T Consensus 287 ~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~- 365 (428)
T PRK01029 287 SFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ- 365 (428)
T ss_pred EECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-
Confidence 5899999887765 46655555 443 33344444444566788999999988766543 468899998886543
Q ss_pred eecCCCCeEEEEEcCCCc-EE-EEeC--CCcEEEEeCCCCeeeEEEe
Q psy3840 75 FSFHSAPALDVDWQSNTS-FA-SCST--DQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 75 ~~~~~~~v~~~~~~~~~~-~~-~~~~--d~~i~i~d~~~~~~~~~~~ 117 (131)
+......+....|+|+++ ++ +... ...++++|+..++......
T Consensus 366 Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~ 412 (428)
T PRK01029 366 LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVI 412 (428)
T ss_pred ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec
Confidence 332234567789999987 44 3332 3468899998776544443
No 230
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.07 E-value=2.2e-08 Score=66.98 Aligned_cols=110 Identities=19% Similarity=0.160 Sum_probs=73.4
Q ss_pred cccCCCCEEEE-EeCCC--eEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC-CCc--EEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLAT-GSYDG--YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV-DKT--TIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~-~~~d~--~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~--i~~~d~~~~~~~~~~~ 76 (131)
.|+|+|+.++. .+.++ .|.+||+.+.....+..+........|+|+++.++..+. ++. ++++|+.+++.. .+.
T Consensus 254 ~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt 332 (433)
T PRK04922 254 SFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE-RLT 332 (433)
T ss_pred eECCCCCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE-Eee
Confidence 58999998764 44555 588899886656666666555677899999998876653 444 666777666532 232
Q ss_pred cCCCCeEEEEEcCCCc-EEEEeC-CC--cEEEEeCCCCeee
Q psy3840 77 FHSAPALDVDWQSNTS-FASCST-DQ--HIHVCKLHSDKPV 113 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~~-d~--~i~i~d~~~~~~~ 113 (131)
..........|+|+++ ++..+. ++ .|.+||+.+++..
T Consensus 333 ~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~ 373 (433)
T PRK04922 333 FQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR 373 (433)
T ss_pred cCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE
Confidence 2233445689999987 544332 22 5999999877543
No 231
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.07 E-value=1e-09 Score=48.68 Aligned_cols=38 Identities=32% Similarity=0.579 Sum_probs=34.4
Q ss_pred cceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEe
Q psy3840 69 GQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCK 106 (131)
Q Consensus 69 ~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d 106 (131)
++++..+.+|...|.+++|+|++. +++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 356788999999999999999966 99999999999997
No 232
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.06 E-value=3.8e-08 Score=65.36 Aligned_cols=109 Identities=13% Similarity=0.117 Sum_probs=73.6
Q ss_pred cccCCCCEEEEEeCC---CeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEE-EeCCC--cEEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLATGSYD---GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILS-AGVDK--TTIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d---~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s-~~~d~--~i~~~d~~~~~~~~~~~ 76 (131)
.|+|+|++++..... ..|.+||+.......+..+.+....+.|+|+++.++. .+.++ .+++||+.+++.. .+.
T Consensus 196 ~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l~ 274 (417)
T TIGR02800 196 AWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT-RLT 274 (417)
T ss_pred cCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEE-ECC
Confidence 489999999887653 3799999875444444455566777899999987664 44443 5888998876543 333
Q ss_pred cCCCCeEEEEEcCCCc-EEEEeC-CC--cEEEEeCCCCee
Q psy3840 77 FHSAPALDVDWQSNTS-FASCST-DQ--HIHVCKLHSDKP 112 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~~-d~--~i~i~d~~~~~~ 112 (131)
.+........|+|+++ ++..+. ++ .|+++|+.+++.
T Consensus 275 ~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~ 314 (417)
T TIGR02800 275 NGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV 314 (417)
T ss_pred CCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 3334445678999976 554433 33 588888876653
No 233
>KOG1538|consensus
Probab=99.06 E-value=2e-09 Score=73.45 Aligned_cols=77 Identities=17% Similarity=0.286 Sum_probs=66.2
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 39 PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
.|..++|-|||..++.+. +..+.+||...|..+.++++|.+.|.+++|+.+|+ +++|+.|..|.+|+.+ .+-+..++
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k-lEG~LkYS 91 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK-LEGILKYS 91 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccc-ccceeeec
Confidence 688999999999988874 44799999999999999999999999999999988 8999999999999864 33334444
No 234
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.05 E-value=2.6e-08 Score=66.52 Aligned_cols=109 Identities=16% Similarity=0.137 Sum_probs=72.6
Q ss_pred cccCCCCEEEEE-eCCC--eEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC-CCc--EEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLATG-SYDG--YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV-DKT--TIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~-~~d~--~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~--i~~~d~~~~~~~~~~~ 76 (131)
.|+|||+.|+.. +.++ .|.+||+.+.....+..+...+....|+|+++.++..+. ++. ++.+|+.+++. ..+.
T Consensus 249 ~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt 327 (429)
T PRK03629 249 AFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRIT 327 (429)
T ss_pred EECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEee
Confidence 589999988865 3344 488889885555555555556788899999998876654 444 44556666543 3333
Q ss_pred cCCCCeEEEEEcCCCc-EEEEeC-C--CcEEEEeCCCCee
Q psy3840 77 FHSAPALDVDWQSNTS-FASCST-D--QHIHVCKLHSDKP 112 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~~-d--~~i~i~d~~~~~~ 112 (131)
..........|+|+++ ++.... + ..|.+||+.+++.
T Consensus 328 ~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~ 367 (429)
T PRK03629 328 WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 367 (429)
T ss_pred cCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe
Confidence 3334456788999987 544433 2 3588899987753
No 235
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.03 E-value=3.4e-08 Score=63.76 Aligned_cols=106 Identities=11% Similarity=0.150 Sum_probs=72.1
Q ss_pred cccCCCCEEEEEeC-CCeEEEEcCC--CC---ceeecccccccEEEEEEcCCCCEEEEEe-CCCcEEEEECCCcceeee-
Q psy3840 3 SSRNNGSFLATGSY-DGYARIWTSD--GS---LKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQ- 74 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~i~~~~~~--~~---~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~- 74 (131)
+++|+++++++++. ++.|.+|++. +. .+..+. +......++++|+++++++++ .++.|.+||+.+...+..
T Consensus 86 ~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~ 164 (330)
T PRK11028 86 STDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQ 164 (330)
T ss_pred EECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCccccc
Confidence 36889999988775 7889999875 22 222222 223457788999998886555 579999999976332211
Q ss_pred ----ee-cCCCCeEEEEEcCCCc-EEEEeC-CCcEEEEeCCC
Q psy3840 75 ----FS-FHSAPALDVDWQSNTS-FASCST-DQHIHVCKLHS 109 (131)
Q Consensus 75 ----~~-~~~~~v~~~~~~~~~~-~~~~~~-d~~i~i~d~~~ 109 (131)
.. ........+.|+|+++ +++... ++.|.+|+++.
T Consensus 165 ~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~ 206 (330)
T PRK11028 165 EPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD 206 (330)
T ss_pred CCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence 11 1123467899999987 545544 88999999973
No 236
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.02 E-value=5.3e-08 Score=65.18 Aligned_cols=93 Identities=15% Similarity=0.139 Sum_probs=70.0
Q ss_pred eEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC---CCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-E-
Q psy3840 19 YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV---DKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-F- 93 (131)
Q Consensus 19 ~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~---d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~- 93 (131)
.|.++|..+.....+..+...+...+|+|+|+.++..+. +..+++||+.+++.. .+......+....|+|+++ +
T Consensus 183 ~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la 261 (435)
T PRK05137 183 RLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVV 261 (435)
T ss_pred EEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEE
Confidence 688888887777777778889999999999998887653 467999999887653 3444455677889999986 5
Q ss_pred EEEeCCC--cEEEEeCCCCee
Q psy3840 94 ASCSTDQ--HIHVCKLHSDKP 112 (131)
Q Consensus 94 ~~~~~d~--~i~i~d~~~~~~ 112 (131)
++.+.++ .|++||+.+++.
T Consensus 262 ~~~~~~g~~~Iy~~d~~~~~~ 282 (435)
T PRK05137 262 MSLSQGGNTDIYTMDLRSGTT 282 (435)
T ss_pred EEEecCCCceEEEEECCCCce
Confidence 3555554 488889887654
No 237
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.02 E-value=6.5e-08 Score=64.62 Aligned_cols=109 Identities=17% Similarity=0.181 Sum_probs=72.8
Q ss_pred cccCCCCEEEEEeCC---CeEEEEcCCCCceeecccccccEEEEEEcCCCCEEE-EEeCCC--cEEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLATGSYD---GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYIL-SAGVDK--TTIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d---~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-s~~~d~--~i~~~d~~~~~~~~~~~ 76 (131)
.|+|||+.|+..+.+ ..|.+|++.+.....+....+......|+|+|+.++ +...++ .++++|+.+++.. .+.
T Consensus 205 ~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt 283 (430)
T PRK00178 205 RWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVT 283 (430)
T ss_pred eECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-Ecc
Confidence 589999999876543 358888987544444444445556789999998776 444444 5888899877643 344
Q ss_pred cCCCCeEEEEEcCCCc-EEEEe-CCC--cEEEEeCCCCee
Q psy3840 77 FHSAPALDVDWQSNTS-FASCS-TDQ--HIHVCKLHSDKP 112 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~-~d~--~i~i~d~~~~~~ 112 (131)
.+........|+|+++ ++..+ .++ .|+++|+.+++.
T Consensus 284 ~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~ 323 (430)
T PRK00178 284 NHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA 323 (430)
T ss_pred cCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 3444556788999976 54433 333 577788877653
No 238
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.01 E-value=1.5e-08 Score=67.65 Aligned_cols=110 Identities=22% Similarity=0.213 Sum_probs=70.1
Q ss_pred cccCCCCEEEE-EeCCCeEEEEc--CCCCceeecccccccEEEEEEcCCCCEEEEEeC-CCcEEEEEC--CCcceeeeee
Q psy3840 3 SSRNNGSFLAT-GSYDGYARIWT--SDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV-DKTTIIWDA--ASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~-~~~d~~i~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~--~~~~~~~~~~ 76 (131)
.|+|||+.|+. .+.++...+|. ..+.....+..+.+......|+|+|+.++..+. ++...+|.+ ..++. ..+.
T Consensus 246 ~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt 324 (427)
T PRK02889 246 AWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA-QRVT 324 (427)
T ss_pred EECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce-EEEe
Confidence 58999998874 56677766664 555555556555555667889999998775543 455566654 44433 2222
Q ss_pred cCCCCeEEEEEcCCCc-EEEEeCCC---cEEEEeCCCCeee
Q psy3840 77 FHSAPALDVDWQSNTS-FASCSTDQ---HIHVCKLHSDKPV 113 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~~d~---~i~i~d~~~~~~~ 113 (131)
..........|+|+++ ++..+.++ .|.+||+.+++..
T Consensus 325 ~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~ 365 (427)
T PRK02889 325 FTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT 365 (427)
T ss_pred cCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE
Confidence 2223344678999987 55444333 6999999877543
No 239
>KOG1409|consensus
Probab=99.01 E-value=1.4e-09 Score=68.67 Aligned_cols=66 Identities=20% Similarity=0.392 Sum_probs=58.0
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCC--CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDG--SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 68 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 68 (131)
+|.+....+.+|..|..+.+||+.+ .....+.+|...+..+...+--+.+.+++.||.|.+||++.
T Consensus 204 ~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 204 KWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNV 271 (404)
T ss_pred EEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccc
Confidence 5788889999999999999999873 44567789999999998888888999999999999999874
No 240
>KOG4532|consensus
Probab=99.01 E-value=5.9e-08 Score=59.82 Aligned_cols=115 Identities=10% Similarity=-0.002 Sum_probs=85.4
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC--CC-cee-ecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCccee-----e
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD--GS-LKS-TLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE-----Q 73 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~--~~-~~~-~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~-----~ 73 (131)
++++++.+.++.++...|..|.+. +. .+. .+..-++.-.+..|+.....++++..||++.+||++..... .
T Consensus 165 ~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~ss 244 (344)
T KOG4532|consen 165 HYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISS 244 (344)
T ss_pred EEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcc
Confidence 578999999999998899999876 22 222 22333444567789999999999999999999999864322 2
Q ss_pred eeecCCCCeEEEEEcCCCc---EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 74 QFSFHSAPALDVDWQSNTS---FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 74 ~~~~~~~~v~~~~~~~~~~---~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
+-+.|.+.+..+.|++.|. |+..-.-+.+++.|+|++...+.+.
T Consensus 245 trp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~ 291 (344)
T KOG4532|consen 245 TRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIV 291 (344)
T ss_pred cCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEe
Confidence 2345778999999998654 4455556789999999986655543
No 241
>KOG4497|consensus
Probab=99.01 E-value=9.4e-09 Score=64.90 Aligned_cols=110 Identities=19% Similarity=0.198 Sum_probs=85.0
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYIL-SAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.|||+|+++|+.++- .+-+-|.+.-.+..+...-+.|.-+.|..+...++ ....++.+.+|++...+--..+.....+
T Consensus 15 ~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~ag 93 (447)
T KOG4497|consen 15 SFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAG 93 (447)
T ss_pred eECCCCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCc
Confidence 589999999999765 66677765433333334456788888888766555 5567889999999988877778877789
Q ss_pred eEEEEEcCCCc--EEEEeCCCcEEEEeCCCCeee
Q psy3840 82 ALDVDWQSNTS--FASCSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 82 v~~~~~~~~~~--~~~~~~d~~i~i~d~~~~~~~ 113 (131)
+.+++|+|+|+ +.+..-+-+|.+|.+.+....
T Consensus 94 ls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~ 127 (447)
T KOG4497|consen 94 LSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY 127 (447)
T ss_pred ceeeeECCCcceEeeeecceeEEEEEEeccceeE
Confidence 99999999986 566777889999999876543
No 242
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.00 E-value=3.6e-08 Score=63.64 Aligned_cols=105 Identities=10% Similarity=0.152 Sum_probs=70.9
Q ss_pred cccCCCCEEEEEeC-CCeEEEEcCC---CCc--eeecccc------cccEEEEEEcCCCCEEEEEeC-CCcEEEEECCCc
Q psy3840 3 SSRNNGSFLATGSY-DGYARIWTSD---GSL--KSTLGQH------KGPIFALKWNKRGNYILSAGV-DKTTIIWDAASG 69 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~i~~~~~~---~~~--~~~~~~~------~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~~~~ 69 (131)
.|+|++++++++.. ++.|.+|++. ++. +..+..+ ......+.++|++++++++.. ++.|.+|++...
T Consensus 181 ~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~ 260 (330)
T PRK11028 181 VFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSED 260 (330)
T ss_pred EECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCC
Confidence 47899999988877 8899999986 221 2222211 112335889999999888865 789999998643
Q ss_pred c----eeeeeecCCCCeEEEEEcCCCc-EEEEe-CCCcEEEEeCC
Q psy3840 70 Q----CEQQFSFHSAPALDVDWQSNTS-FASCS-TDQHIHVCKLH 108 (131)
Q Consensus 70 ~----~~~~~~~~~~~v~~~~~~~~~~-~~~~~-~d~~i~i~d~~ 108 (131)
. .+..... ......+.++|+++ ++++. .++.|.+|++.
T Consensus 261 ~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 261 GSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred CCeEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 2 2222222 23456789999987 55444 48899999874
No 243
>KOG1587|consensus
Probab=99.00 E-value=7.3e-09 Score=70.44 Aligned_cols=105 Identities=23% Similarity=0.309 Sum_probs=80.2
Q ss_pred cCCCCEEEEEeCCCeEEEEcCC-----C----CceeecccccccEEEEEEcCCCC-EEEEEeCCCcEEEEECC-Ccceee
Q psy3840 5 RNNGSFLATGSYDGYARIWTSD-----G----SLKSTLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAA-SGQCEQ 73 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~-----~----~~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~-~~~~~~ 73 (131)
..+...+++|+.+|.|.--+-. . +.......|.+++.++.++|=+. .+++++ |.++++|... ...++.
T Consensus 357 ~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~ 435 (555)
T KOG1587|consen 357 PTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLL 435 (555)
T ss_pred cCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcch
Confidence 3466789999999998873322 1 22445667899999999999444 455554 9999999987 566666
Q ss_pred eeecCCCCeEEEEEcCCC--cEEEEeCCCcEEEEeCCCC
Q psy3840 74 QFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 74 ~~~~~~~~v~~~~~~~~~--~~~~~~~d~~i~i~d~~~~ 110 (131)
.+..+...+++++|+|.. .++++..+|.+.+||+...
T Consensus 436 ~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~ 474 (555)
T KOG1587|consen 436 SLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD 474 (555)
T ss_pred hhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc
Confidence 666667779999999973 3899999999999999654
No 244
>KOG3881|consensus
Probab=98.97 E-value=2.5e-08 Score=63.87 Aligned_cols=111 Identities=13% Similarity=0.149 Sum_probs=85.5
Q ss_pred cCCCCEEEEEeCC--CeEEEEcCC-CCceeeccc---------ccccEEEEEEcCC--CCEEEEEeCCCcEEEEECCCc-
Q psy3840 5 RNNGSFLATGSYD--GYARIWTSD-GSLKSTLGQ---------HKGPIFALKWNKR--GNYILSAGVDKTTIIWDAASG- 69 (131)
Q Consensus 5 ~~~~~~l~~~~~d--~~i~~~~~~-~~~~~~~~~---------~~~~i~~~~~~~~--~~~~~s~~~d~~i~~~d~~~~- 69 (131)
..+..++++|+.. ..+.+||++ .+.+..-+. -.-.++.+.|-+. ...++++..-+.+++||.+.+
T Consensus 158 ~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR 237 (412)
T KOG3881|consen 158 DTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR 237 (412)
T ss_pred CCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccC
Confidence 3456778889988 789999987 333322221 1234567788886 788999999999999999875
Q ss_pred ceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEE
Q psy3840 70 QCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKS 115 (131)
Q Consensus 70 ~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~ 115 (131)
+++..+.....+++++...|++. ++++..-+.+..||++.++.+..
T Consensus 238 RPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~ 284 (412)
T KOG3881|consen 238 RPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGC 284 (412)
T ss_pred cceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeecc
Confidence 45667776778999999999977 88999999999999998876554
No 245
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.96 E-value=2.6e-08 Score=66.80 Aligned_cols=74 Identities=9% Similarity=0.163 Sum_probs=61.2
Q ss_pred cccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCC
Q psy3840 35 QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 35 ~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~ 110 (131)
.....+.+++++|+...++.|+.||++.+||...+..... ...-.+..++|+|+|. ++.|+..|.+.+||+.-.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 4667899999999999999999999999999877643322 3345678899999987 788888999999998643
No 246
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.95 E-value=2e-07 Score=61.16 Aligned_cols=109 Identities=15% Similarity=0.153 Sum_probs=75.1
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEe-CCCcEEEEECCCcceeeeeecC--
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIWDAASGQCEQQFSFH-- 78 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~-- 78 (131)
.++||++++++.+.||.|.++|+. ++.+.++.... ....++++++|+++++++ ..+.+.++|.++.+.++.+...
T Consensus 43 ~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~ 121 (369)
T PF02239_consen 43 KFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGM 121 (369)
T ss_dssp E-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE
T ss_pred EecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccc
Confidence 478999999999999999999987 66666665543 457899999999998776 4899999999999888877642
Q ss_pred -----CCCeEEEEEcCCCc-EEEE-eCCCcEEEEeCCCCee
Q psy3840 79 -----SAPALDVDWQSNTS-FASC-STDQHIHVCKLHSDKP 112 (131)
Q Consensus 79 -----~~~v~~~~~~~~~~-~~~~-~~d~~i~i~d~~~~~~ 112 (131)
..++..+..+|... ++.. -..++|.+.|....+.
T Consensus 122 ~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~ 162 (369)
T PF02239_consen 122 PVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKN 162 (369)
T ss_dssp -TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSC
T ss_pred cccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccc
Confidence 23566777777755 5444 4457888888766543
No 247
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.94 E-value=1.7e-07 Score=63.02 Aligned_cols=109 Identities=16% Similarity=0.145 Sum_probs=70.6
Q ss_pred cccCCCCEEEEEeC-CC--eEEEEcCCCCceeecccccccEEEEEEcCCCCEEEE-EeCCCc--EEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLATGSY-DG--YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILS-AGVDKT--TIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~--~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s-~~~d~~--i~~~d~~~~~~~~~~~ 76 (131)
.|+|||+.|+..+. ++ .|.++|+.+.....+....+......|+|+++.++. .+.++. |+++|+.+++. ..+.
T Consensus 224 ~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt 302 (448)
T PRK04792 224 AWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL-TRIT 302 (448)
T ss_pred eECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECc
Confidence 58999999987654 33 477888874433333333334457799999997764 455664 77788877754 3344
Q ss_pred cCCCCeEEEEEcCCCc-EEE-EeCCC--cEEEEeCCCCee
Q psy3840 77 FHSAPALDVDWQSNTS-FAS-CSTDQ--HIHVCKLHSDKP 112 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~-~~~d~--~i~i~d~~~~~~ 112 (131)
.+........|+|+++ ++. ...++ .|+++|+.+++.
T Consensus 303 ~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~ 342 (448)
T PRK04792 303 RHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV 342 (448)
T ss_pred cCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 3444567789999987 543 33333 577778876654
No 248
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.89 E-value=2.6e-07 Score=61.40 Aligned_cols=108 Identities=21% Similarity=0.297 Sum_probs=73.2
Q ss_pred cccCCCCEEEEE-eCCC--eEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC-CC--cEEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLATG-SYDG--YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV-DK--TTIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~-~~d~--~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~--~i~~~d~~~~~~~~~~~ 76 (131)
.|+|+++.|+.. +.++ .|.+|++.+.....+..+........|+|+++.++..+. ++ .++++|+.+++. ..+.
T Consensus 240 ~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-~~l~ 318 (417)
T TIGR02800 240 AFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-RRLT 318 (417)
T ss_pred EECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEee
Confidence 479999877654 4444 588888876555555555555567789999998776544 33 577788876654 3333
Q ss_pred cCCCCeEEEEEcCCCc-EEEEeCCC---cEEEEeCCCCe
Q psy3840 77 FHSAPALDVDWQSNTS-FASCSTDQ---HIHVCKLHSDK 111 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~~d~---~i~i~d~~~~~ 111 (131)
..........|+|+++ ++....++ .|.+||+.++.
T Consensus 319 ~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~ 357 (417)
T TIGR02800 319 FRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG 357 (417)
T ss_pred cCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCC
Confidence 3445567789999987 65555554 78899988754
No 249
>KOG2315|consensus
Probab=98.88 E-value=1.1e-07 Score=63.42 Aligned_cols=101 Identities=21% Similarity=0.321 Sum_probs=77.7
Q ss_pred ccCCCCEEEEEe--CCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC---CCcEEEEECCCcceeeeeecC
Q psy3840 4 SRNNGSFLATGS--YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV---DKTTIIWDAASGQCEQQFSFH 78 (131)
Q Consensus 4 ~~~~~~~l~~~~--~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~---d~~i~~~d~~~~~~~~~~~~~ 78 (131)
|++++..++++- .--.+.+||++++++..+. +++-.++-|+|.|++++.++- .|.+-+||..+.+++..+...
T Consensus 278 W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~ 355 (566)
T KOG2315|consen 278 WSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAA 355 (566)
T ss_pred ECCCCCEEEEEEecccceEEEEcCCCCEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccC
Confidence 788887766643 2446899999988887654 356688999999999888765 588999999998888777653
Q ss_pred CCCeEEEEEcCCCc-EEEEeC------CCcEEEEeCC
Q psy3840 79 SAPALDVDWQSNTS-FASCST------DQHIHVCKLH 108 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~~~~~~------d~~i~i~d~~ 108 (131)
..+-..|+|||. +++++. |+.++||+..
T Consensus 356 --~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 356 --NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred --CceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence 334578999998 766654 6778899875
No 250
>KOG1963|consensus
Probab=98.86 E-value=1.3e-07 Score=65.75 Aligned_cols=116 Identities=16% Similarity=0.216 Sum_probs=91.3
Q ss_pred ccccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC---
Q psy3840 2 QSSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH--- 78 (131)
Q Consensus 2 ~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~--- 78 (131)
.+|+++|.+|++|+..+.+-+|....+...-+..-.++|..+.++|++.+.+....|..|.+....+.....++.+.
T Consensus 257 L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~ 336 (792)
T KOG1963|consen 257 LSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPP 336 (792)
T ss_pred eEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCC
Confidence 36899999999999999999999874445556667789999999999999999999999999887655443333321
Q ss_pred --------CCCeEEEEEcCC-CcEEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 79 --------SAPALDVDWQSN-TSFASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 79 --------~~~v~~~~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
.+-.+.++++|. +.++..+..+.|++||+-+.+.+..+.
T Consensus 337 ~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~ 384 (792)
T KOG1963|consen 337 TPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQ 384 (792)
T ss_pred CccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEE
Confidence 233567788885 458888999999999998887766553
No 251
>KOG1240|consensus
Probab=98.84 E-value=3.5e-08 Score=71.11 Aligned_cols=87 Identities=21% Similarity=0.364 Sum_probs=70.4
Q ss_pred EcCCCCceeecccccccEEEEEEcCC-CCEEEEEeCCCcEEEEECCCcc-------eeeeeecCCCCeEEEEEcCCCc-E
Q psy3840 23 WTSDGSLKSTLGQHKGPIFALKWNKR-GNYILSAGVDKTTIIWDAASGQ-------CEQQFSFHSAPALDVDWQSNTS-F 93 (131)
Q Consensus 23 ~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~-------~~~~~~~~~~~v~~~~~~~~~~-~ 93 (131)
|+.+|..+..+..|...+..++.+++ +.++++|+.||++++||+++-. ...++...+.++..+...+.+. +
T Consensus 1034 W~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~ 1113 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQF 1113 (1431)
T ss_pred CCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeE
Confidence 78889999999999999989988874 5999999999999999997521 1223333456788888888865 9
Q ss_pred EEEeCCCcEEEEeCCC
Q psy3840 94 ASCSTDQHIHVCKLHS 109 (131)
Q Consensus 94 ~~~~~d~~i~i~d~~~ 109 (131)
+.++.||.|.+.++..
T Consensus 1114 Av~t~DG~v~~~~id~ 1129 (1431)
T KOG1240|consen 1114 AVSTKDGSVRVLRIDH 1129 (1431)
T ss_pred EEEcCCCeEEEEEccc
Confidence 9999999999998865
No 252
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.84 E-value=5.3e-07 Score=60.33 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=71.0
Q ss_pred cccCCCCEEEE-EeCCC--eEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC-CC--cEEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLAT-GSYDG--YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV-DK--TTIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~-~~~d~--~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~--~i~~~d~~~~~~~~~~~ 76 (131)
.|+|||+.|+. ...++ .|.++|+.++....+..+........|+|+++.++..+. ++ .++++|+.+++... +.
T Consensus 249 ~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-lt 327 (430)
T PRK00178 249 AWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-VT 327 (430)
T ss_pred EECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-ee
Confidence 58999998874 44455 577889886665556555555667889999987765543 33 57777887776432 22
Q ss_pred cCCCCeEEEEEcCCCc-EEEEeC-CC--cEEEEeCCCCee
Q psy3840 77 FHSAPALDVDWQSNTS-FASCST-DQ--HIHVCKLHSDKP 112 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~~-d~--~i~i~d~~~~~~ 112 (131)
..........|+|+++ ++.... ++ .|.++|+.+++.
T Consensus 328 ~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~ 367 (430)
T PRK00178 328 FVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV 367 (430)
T ss_pred cCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCE
Confidence 2222334578999987 544332 33 588899887653
No 253
>KOG3914|consensus
Probab=98.84 E-value=1.4e-08 Score=65.07 Aligned_cols=72 Identities=22% Similarity=0.279 Sum_probs=58.4
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCC--ceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGS--LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 75 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 75 (131)
+++||+++|+++..|+.|++-..... .-.-..||...|..++.-++. .+++++.|+++++||+++++.+..+
T Consensus 158 avS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 158 AVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRLWDITSGKLLDTC 231 (390)
T ss_pred eecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEEEEecccCCccccc
Confidence 47999999999999999998766522 223346799999999877654 4899999999999999999877554
No 254
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.82 E-value=5.4e-07 Score=55.88 Aligned_cols=45 Identities=9% Similarity=0.104 Sum_probs=37.4
Q ss_pred CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceE
Q psy3840 79 SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVY 123 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 123 (131)
...|..|..+|++. |++...+|.|.+|++.+-.+...+..++.+-
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~eqPg 274 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDEQPG 274 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhhCCC
Confidence 35688999999988 8888999999999999988888877655543
No 255
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.81 E-value=5.6e-07 Score=60.26 Aligned_cols=111 Identities=16% Similarity=0.220 Sum_probs=66.4
Q ss_pred cccCCCCEEEEEeC-CC----eEEEEcCCC----CceeecccccccEEEEEEcCCCCEEEEEe-CCCcEEEE--ECCC-c
Q psy3840 3 SSRNNGSFLATGSY-DG----YARIWTSDG----SLKSTLGQHKGPIFALKWNKRGNYILSAG-VDKTTIIW--DAAS-G 69 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~----~i~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~--d~~~-~ 69 (131)
.|+|||+.|+..+. +| .+..|++.. ..........+......|+|+|+.++..+ .++...+| ++.. +
T Consensus 237 ~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g 316 (428)
T PRK01029 237 TFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEG 316 (428)
T ss_pred EECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccc
Confidence 58999998887653 23 233466542 22222222223345679999999777554 46654555 4432 2
Q ss_pred ceeeeeecCCCCeEEEEEcCCCc-EEEEeC-C--CcEEEEeCCCCeee
Q psy3840 70 QCEQQFSFHSAPALDVDWQSNTS-FASCST-D--QHIHVCKLHSDKPV 113 (131)
Q Consensus 70 ~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~-d--~~i~i~d~~~~~~~ 113 (131)
.....+......+....|+|+++ ++.... + ..|.+||+.+++..
T Consensus 317 ~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~ 364 (428)
T PRK01029 317 QSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY 364 (428)
T ss_pred cceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE
Confidence 23344444445667889999987 554433 2 36999999877553
No 256
>KOG4547|consensus
Probab=98.79 E-value=1.6e-07 Score=62.83 Aligned_cols=102 Identities=13% Similarity=0.124 Sum_probs=80.9
Q ss_pred cCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeE
Q psy3840 5 RNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 83 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~ 83 (131)
+.+-..|.+++.|+.+..|+.. .............+.+++.+||+..+++++. +|++||+++++.+..+.+|.++|.
T Consensus 111 ~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as~--~ik~~~~~~kevv~~ftgh~s~v~ 188 (541)
T KOG4547|consen 111 AQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTASR--QIKVLDIETKEVVITFTGHGSPVR 188 (541)
T ss_pred ccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEeccc--eEEEEEccCceEEEEecCCCcceE
Confidence 4455678888999999999987 5556666777788999999999998887764 599999999999999999999999
Q ss_pred EEEEcCC-----Cc-E-EEEeCCCcEEEEeCC
Q psy3840 84 DVDWQSN-----TS-F-ASCSTDQHIHVCKLH 108 (131)
Q Consensus 84 ~~~~~~~-----~~-~-~~~~~d~~i~i~d~~ 108 (131)
+++|... |. + .+...+..+.+|-.+
T Consensus 189 t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 189 TLSFTTLIDGIIGKYVLSSAAAERGITVWVVE 220 (541)
T ss_pred EEEEEEeccccccceeeeccccccceeEEEEE
Confidence 9999654 44 3 333445567777654
No 257
>KOG4227|consensus
Probab=98.76 E-value=2.6e-07 Score=59.91 Aligned_cols=108 Identities=11% Similarity=0.065 Sum_probs=83.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeeccccc---ccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcce-eee--ee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHK---GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQC-EQQ--FS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~-~~~--~~ 76 (131)
+|...+.++++|..+++|.+.|+..+...-+..|. +.|..+..+|..+.+++.+.++.+.+||.+..+. ... ..
T Consensus 112 ~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~A 191 (609)
T KOG4227|consen 112 EFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPA 191 (609)
T ss_pred EEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeec
Confidence 46667889999999999999999855544444454 4899999999999999999999999999987552 221 12
Q ss_pred cCCCCeEEEEEcCCC-c-EEEEeCCCcEEEEeCCCC
Q psy3840 77 FHSAPALDVDWQSNT-S-FASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~-~-~~~~~~d~~i~i~d~~~~ 110 (131)
........+.|+|.. . +++.+..+.+-+||.+..
T Consensus 192 N~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~ 227 (609)
T KOG4227|consen 192 NSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQ 227 (609)
T ss_pred CCCccceeeeecCCCceeEEeccccCCCCceeeccc
Confidence 234567888999973 4 778888888999998854
No 258
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.73 E-value=1.5e-06 Score=58.56 Aligned_cols=109 Identities=16% Similarity=0.169 Sum_probs=69.5
Q ss_pred cccCCCCEEEE-EeCCCe--EEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC-CC--cEEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLAT-GSYDGY--ARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV-DK--TTIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~-~~~d~~--i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~--~i~~~d~~~~~~~~~~~ 76 (131)
.|+|||+.|+. .+.++. |.++|+.+.....+..+........|+|+++.++..+. ++ .++++|+.+++... +.
T Consensus 268 ~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt 346 (448)
T PRK04792 268 RFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LT 346 (448)
T ss_pred eECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-Ee
Confidence 58999998875 455665 66778776666666555556677899999997765543 44 46667777766432 22
Q ss_pred cCCCCeEEEEEcCCCc-EEEE-eCCC--cEEEEeCCCCee
Q psy3840 77 FHSAPALDVDWQSNTS-FASC-STDQ--HIHVCKLHSDKP 112 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~-~~d~--~i~i~d~~~~~~ 112 (131)
..........|+|+++ ++.. ..++ .|.++|+.+++.
T Consensus 347 ~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~ 386 (448)
T PRK04792 347 FEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM 386 (448)
T ss_pred cCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe
Confidence 2222334568999987 4443 3334 466678877653
No 259
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.71 E-value=3e-07 Score=61.89 Aligned_cols=66 Identities=12% Similarity=0.155 Sum_probs=54.0
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG 69 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~ 69 (131)
+++|+...++.|+.||.|.+||...+..... ...-....++|+|+|..+++|+..|.+.+||+.-.
T Consensus 266 a~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 266 ARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred ecCcccceEEEEecCCeEEEEEcCCCeeeee-eecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 5789999999999999999999864433222 23345688999999999999999999999998643
No 260
>KOG4714|consensus
Probab=98.70 E-value=1.4e-07 Score=57.92 Aligned_cols=63 Identities=21% Similarity=0.447 Sum_probs=55.1
Q ss_pred CCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCC
Q psy3840 6 NNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAAS 68 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~ 68 (131)
...+.+++|+.||.+.+||.. ..+...++.|..+++.+-|+| ++..+++++.||.+..||..+
T Consensus 190 ~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 190 AQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 356788889999999999987 456677889999999999999 788999999999999999764
No 261
>KOG1354|consensus
Probab=98.69 E-value=5e-08 Score=61.95 Aligned_cols=116 Identities=12% Similarity=0.148 Sum_probs=80.6
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC--CCc--eeecc-----cccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCccee-
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD--GSL--KSTLG-----QHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQCE- 72 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~--~~~--~~~~~-----~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~- 72 (131)
++.|.+.++++ +|-.|.+|++. .+. +.-++ .-+..|++..|+| ..+.++-.+..|+|++.|++.....
T Consensus 172 ~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd 250 (433)
T KOG1354|consen 172 VNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCD 250 (433)
T ss_pred ecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhc
Confidence 56678888886 57789999976 211 11122 2346788889999 5678888889999999999853211
Q ss_pred -----eee----------ecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCC-CCeeeEEEeccc
Q psy3840 73 -----QQF----------SFHSAPALDVDWQSNTSFASCSTDQHIHVCKLH-SDKPVKSFEGHT 120 (131)
Q Consensus 73 -----~~~----------~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~-~~~~~~~~~~~~ 120 (131)
... ..--..|..+.|+++|+++..-.--+|++||+. ..+++.++..|.
T Consensus 251 ~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~ 314 (433)
T KOG1354|consen 251 AHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHE 314 (433)
T ss_pred chhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehH
Confidence 111 111245888999999997666666799999994 457777776654
No 262
>KOG1064|consensus
Probab=98.69 E-value=3.9e-08 Score=73.36 Aligned_cols=112 Identities=12% Similarity=0.240 Sum_probs=87.9
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEe---CCCcEEEEECCCcce-eeeeecC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG---VDKTTIIWDAASGQC-EQQFSFH 78 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~---~d~~i~~~d~~~~~~-~~~~~~~ 78 (131)
.|+.+|+.+..+..||.+.+|.+..++...-+.|........|-. ..+++++ .++.+.+||...... -..-..|
T Consensus 2258 ~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H 2335 (2439)
T KOG1064|consen 2258 RFNHQGNKFGIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCH 2335 (2439)
T ss_pred hhcccCCceeeeccCCceeecccCCcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeec
Confidence 367889999999999999999998777777788888888887764 5566554 367899999754322 1222678
Q ss_pred CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEE
Q psy3840 79 SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~ 116 (131)
.+.++++++.|..+ +++|+.+|.|++||++..+.+..+
T Consensus 2336 ~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~ 2374 (2439)
T KOG1064|consen 2336 DGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTF 2374 (2439)
T ss_pred CCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHh
Confidence 88999999999977 899999999999999876655544
No 263
>KOG1064|consensus
Probab=98.67 E-value=2.4e-08 Score=74.40 Aligned_cols=93 Identities=15% Similarity=0.253 Sum_probs=73.1
Q ss_pred CCCeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCcE
Q psy3840 16 YDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSF 93 (131)
Q Consensus 16 ~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 93 (131)
.++.+.+||.. +........|.+.++++++.|..+.+++|+++|.+++||++..+.+..++. ++....+
T Consensus 2313 d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~~~~~f 2383 (2439)
T KOG1064|consen 2313 DNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LDTREYF 2383 (2439)
T ss_pred CCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh---------hhhhhee
Confidence 36679999964 322222378999999999999999999999999999999998877666554 3333448
Q ss_pred EEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 94 ASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 94 ~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
++++..|.++||++.....+.++.
T Consensus 2384 ~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2384 VTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred eccCcccceEEEEccccchhhcCc
Confidence 999999999999998776666553
No 264
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.66 E-value=2.9e-06 Score=62.50 Aligned_cols=110 Identities=13% Similarity=0.071 Sum_probs=74.8
Q ss_pred cccCCCCEEEEE-eCCCeEEEEcCCCCceeecc--------------cc--------cccEEEEEEcCCCCEEEEEeCCC
Q psy3840 3 SSRNNGSFLATG-SYDGYARIWTSDGSLKSTLG--------------QH--------KGPIFALKWNKRGNYILSAGVDK 59 (131)
Q Consensus 3 ~~~~~~~~l~~~-~~d~~i~~~~~~~~~~~~~~--------------~~--------~~~i~~~~~~~~~~~~~s~~~d~ 59 (131)
+++|+++.++++ ..++.|++||+.......+. .. -.....++++++|..+++-..++
T Consensus 746 avspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~ 825 (1057)
T PLN02919 746 SLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNH 825 (1057)
T ss_pred EEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCC
Confidence 367888755544 45789999998632111110 00 01235789999999888888899
Q ss_pred cEEEEECCCcceeeeee-------------cCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCee
Q psy3840 60 TTIIWDAASGQCEQQFS-------------FHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKP 112 (131)
Q Consensus 60 ~i~~~d~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~ 112 (131)
.|++||..++....... ..-.....++++++++ +++-+.++.|++||+++++.
T Consensus 826 rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 826 KIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 99999998765442221 1112467889999988 56667788999999988764
No 265
>KOG4714|consensus
Probab=98.65 E-value=6.9e-08 Score=59.24 Aligned_cols=72 Identities=17% Similarity=0.251 Sum_probs=59.8
Q ss_pred ccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcce-eeeeecCCCCeEEEEEcCC-C-cEEEEeCCCcEEEEeCCC
Q psy3840 38 GPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQC-EQQFSFHSAPALDVDWQSN-T-SFASCSTDQHIHVCKLHS 109 (131)
Q Consensus 38 ~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~-~~~~~~~~~~v~~~~~~~~-~-~~~~~~~d~~i~i~d~~~ 109 (131)
..+.+++-+| +.+.+++|+.||.+.+||.++... ...+..|+.+++.+.|+|. + +|++++.||.+..||-.+
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 3488889899 566778888899999999998644 3456778999999999996 3 499999999999999764
No 266
>KOG4190|consensus
Probab=98.61 E-value=2e-07 Score=63.00 Aligned_cols=110 Identities=20% Similarity=0.284 Sum_probs=73.9
Q ss_pred CCCEEEEEeCCCeEEEEcCC--C------CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeee---
Q psy3840 7 NGSFLATGSYDGYARIWTSD--G------SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF--- 75 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~--~------~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~--- 75 (131)
+.+.+++++.|.+|++|.++ + .+..++..|..+|..+.|-.+-++++++ ||-+.+||.--++.+...
T Consensus 746 NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWDPFigr~Laq~~da 823 (1034)
T KOG4190|consen 746 NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLWDPFIGRLLAQMEDA 823 (1034)
T ss_pred cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcceeecccccchhHhhhcC
Confidence 45677888999999999976 2 2456778899999999888777776654 667888987544322211
Q ss_pred --------------------------------------------e-----cCCCCeEEEEEcCCCc-EEEEeCCCcEEEE
Q psy3840 76 --------------------------------------------S-----FHSAPALDVDWQSNTS-FASCSTDQHIHVC 105 (131)
Q Consensus 76 --------------------------------------------~-----~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~ 105 (131)
+ +....+.+++..+.|. ++.+-.+|.|.+.
T Consensus 824 pk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~L 903 (1034)
T KOG4190|consen 824 PKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAIL 903 (1034)
T ss_pred cccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEE
Confidence 0 1112345555555544 6666677788888
Q ss_pred eCCCCeeeEEEec
Q psy3840 106 KLHSDKPVKSFEG 118 (131)
Q Consensus 106 d~~~~~~~~~~~~ 118 (131)
|.|+|+.+.++.+
T Consensus 904 DaR~G~vINswrp 916 (1034)
T KOG4190|consen 904 DARNGKVINSWRP 916 (1034)
T ss_pred ecCCCceeccCCc
Confidence 8888877765543
No 267
>KOG1409|consensus
Probab=98.59 E-value=6.4e-07 Score=57.02 Aligned_cols=84 Identities=23% Similarity=0.459 Sum_probs=69.7
Q ss_pred CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCccee-eeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEE
Q psy3840 27 GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE-QQFSFHSAPALDVDWQSNTS-FASCSTDQHIHV 104 (131)
Q Consensus 27 ~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i 104 (131)
-..+.++.+|.+.+.++.|.|....+.++..|..+.+||+--.+-. ..+.+|...|..+.+.+-.+ +.+++.|+.|.+
T Consensus 187 ~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~ 266 (404)
T KOG1409|consen 187 CQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVV 266 (404)
T ss_pred CceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEE
Confidence 3566788899999999999999999999999999999998755433 45567778888887766544 899999999999
Q ss_pred EeCCCC
Q psy3840 105 CKLHSD 110 (131)
Q Consensus 105 ~d~~~~ 110 (131)
||++..
T Consensus 267 w~mn~~ 272 (404)
T KOG1409|consen 267 WNMNVK 272 (404)
T ss_pred Eeccce
Confidence 998754
No 268
>KOG2695|consensus
Probab=98.59 E-value=1.3e-07 Score=60.14 Aligned_cols=104 Identities=15% Similarity=0.323 Sum_probs=76.6
Q ss_pred CCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc-----ceeeeeecCCCCeEEEEEcC-C
Q psy3840 17 DGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG-----QCEQQFSFHSAPALDVDWQS-N 90 (131)
Q Consensus 17 d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~-----~~~~~~~~~~~~v~~~~~~~-~ 90 (131)
+..|-+-|+.++....+. ..+.|.++.|...++++..|..+|.|...|++.+ .+...+ .|...++++..-. +
T Consensus 233 sqqv~L~nvetg~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s 310 (425)
T KOG2695|consen 233 SQQVLLTNVETGHQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFS 310 (425)
T ss_pred cceeEEEEeecccccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccc
Confidence 445566666655544444 4456788889988999999999999999999864 233333 3567788777644 4
Q ss_pred Cc-EEEEeCCCcEEEEeCCCCee---eEEEecccce
Q psy3840 91 TS-FASCSTDQHIHVCKLHSDKP---VKSFEGHTRV 122 (131)
Q Consensus 91 ~~-~~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~ 122 (131)
++ |++.+-+|+|.+||+|.-++ ++++.+|-+.
T Consensus 311 ~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~ 346 (425)
T KOG2695|consen 311 QQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNL 346 (425)
T ss_pred cceEeeccCcCceeEeeehhhhcccceeeeeccccc
Confidence 44 88888999999999998777 8999888653
No 269
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.58 E-value=6.2e-06 Score=53.83 Aligned_cols=112 Identities=8% Similarity=0.147 Sum_probs=71.9
Q ss_pred cccCCCCEEEEEeC-CCeEEEEcCC--CCce---eeccc----c--cccEEEEEEcCCCCEEEEEeC-CCcEEEEECCC-
Q psy3840 3 SSRNNGSFLATGSY-DGYARIWTSD--GSLK---STLGQ----H--KGPIFALKWNKRGNYILSAGV-DKTTIIWDAAS- 68 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~i~~~~~~--~~~~---~~~~~----~--~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~~~- 68 (131)
.|+|+++++++... +++|.++++. .... ..... . ......++++|++++++++.. +++|.+|++..
T Consensus 198 ~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~ 277 (345)
T PF10282_consen 198 AFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPA 277 (345)
T ss_dssp EE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTT
T ss_pred EEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecC
Confidence 47899999877766 7789998865 2111 11111 1 125788999999998877665 77899999842
Q ss_pred -cce--eeeeecCCCCeEEEEEcCCCc-EEEE-eCCCcEEEEeC--CCCeeeE
Q psy3840 69 -GQC--EQQFSFHSAPALDVDWQSNTS-FASC-STDQHIHVCKL--HSDKPVK 114 (131)
Q Consensus 69 -~~~--~~~~~~~~~~v~~~~~~~~~~-~~~~-~~d~~i~i~d~--~~~~~~~ 114 (131)
++. +..+.........+.++|+++ ++.+ ..++.|.+|++ ++|....
T Consensus 278 ~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~ 330 (345)
T PF10282_consen 278 TGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTP 330 (345)
T ss_dssp TTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred CCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEE
Confidence 332 333443345578999999987 5444 45678999976 4665433
No 270
>KOG1645|consensus
Probab=98.58 E-value=4.7e-07 Score=58.63 Aligned_cols=78 Identities=10% Similarity=0.082 Sum_probs=66.1
Q ss_pred ecccccccEEEEEEcCCCC-EEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc--EEEEeCCCcEEEEeCC
Q psy3840 32 TLGQHKGPIFALKWNKRGN-YILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS--FASCSTDQHIHVCKLH 108 (131)
Q Consensus 32 ~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~d~~i~i~d~~ 108 (131)
.+..+...|..++|+|..+ ++..++.+..|++.|+++...+..+..+ ..+++++|+-+.. +..|..+|.|.|||++
T Consensus 188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R 266 (463)
T KOG1645|consen 188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMR 266 (463)
T ss_pred cccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEcc
Confidence 3445667899999999666 7888999999999999999888888876 7899999987743 7888999999999998
Q ss_pred CC
Q psy3840 109 SD 110 (131)
Q Consensus 109 ~~ 110 (131)
..
T Consensus 267 ~~ 268 (463)
T KOG1645|consen 267 QP 268 (463)
T ss_pred CC
Confidence 64
No 271
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.56 E-value=3.4e-05 Score=50.38 Aligned_cols=109 Identities=10% Similarity=0.152 Sum_probs=79.3
Q ss_pred CCCEEEEEeCCCeEEEEcCCCC------ceeeccc-------ccccEEEEEEcCCCCEEEEEe----------CCCcEEE
Q psy3840 7 NGSFLATGSYDGYARIWTSDGS------LKSTLGQ-------HKGPIFALKWNKRGNYILSAG----------VDKTTII 63 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~~------~~~~~~~-------~~~~i~~~~~~~~~~~~~s~~----------~d~~i~~ 63 (131)
++.++.+... |.|.+.|+.+. ....+.. ..+...-++++|+++.++... ..+.+.+
T Consensus 205 dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~V 283 (352)
T TIGR02658 205 SGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFV 283 (352)
T ss_pred CCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEE
Confidence 7878877655 99999996422 2222111 223444589999988877742 1257999
Q ss_pred EECCCcceeeeeecCCCCeEEEEEcCCCc-E--EEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 64 WDAASGQCEQQFSFHSAPALDVDWQSNTS-F--ASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 64 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~--~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
+|..+++.+..+.. ...+..++++|+++ + ++...++.|.++|..+++.+.++.
T Consensus 284 iD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~ 339 (352)
T TIGR02658 284 VDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVN 339 (352)
T ss_pred EECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence 99999999988875 45889999999977 3 344467889999999999999884
No 272
>KOG4640|consensus
Probab=98.55 E-value=5.8e-07 Score=61.12 Aligned_cols=86 Identities=16% Similarity=0.102 Sum_probs=70.8
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEE-EEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee-cCCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIF-ALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS-FHSA 80 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~-~~~~ 80 (131)
.|+|.-..+|.+..+|.|-+..++-..+.++..+..+++ +++|.|+|+.++.|-.||+|++.|..++..+.... ....
T Consensus 27 ewnP~~dLiA~~t~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~ 106 (665)
T KOG4640|consen 27 EWNPKMDLIATRTEKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVET 106 (665)
T ss_pred EEcCccchhheeccCCcEEEEEeccceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceecccccccc
Confidence 478889999999999999999888788888887777777 99999999999999999999999999987766532 1234
Q ss_pred CeEEEEEc
Q psy3840 81 PALDVDWQ 88 (131)
Q Consensus 81 ~v~~~~~~ 88 (131)
.+..+.|.
T Consensus 107 ~is~~~w~ 114 (665)
T KOG4640|consen 107 DISKGIWD 114 (665)
T ss_pred chheeecc
Confidence 56666664
No 273
>KOG3621|consensus
Probab=98.55 E-value=6.6e-07 Score=61.50 Aligned_cols=107 Identities=12% Similarity=0.172 Sum_probs=81.4
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeeccc--ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceee-----ee
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQ--HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ-----QF 75 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~-----~~ 75 (131)
.++..+.+++.|+.-|.+.+|+-.++....++. -.+.+.....+++..+++.|+..|.|.++.+.+..... ..
T Consensus 40 c~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~ 119 (726)
T KOG3621|consen 40 CVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPC 119 (726)
T ss_pred EeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccc
Confidence 456678999999999999999977555444433 44555666778888899999999999999887642211 11
Q ss_pred -ecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCC
Q psy3840 76 -SFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 76 -~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~ 109 (131)
..|...|++++|++++. +.+|...|+|..-.+.+
T Consensus 120 d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 120 DKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 12567899999999987 99999999998877765
No 274
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.54 E-value=1.5e-05 Score=53.39 Aligned_cols=109 Identities=13% Similarity=0.118 Sum_probs=69.0
Q ss_pred cccCCCCE-EEEEeCC---CeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEE-EeCC--CcEEEEECCCcceeeee
Q psy3840 3 SSRNNGSF-LATGSYD---GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILS-AGVD--KTTIIWDAASGQCEQQF 75 (131)
Q Consensus 3 ~~~~~~~~-l~~~~~d---~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s-~~~d--~~i~~~d~~~~~~~~~~ 75 (131)
.|+|+|+. ++..+.+ ..|.++|+.+.....+....+......|+|+|+.++. .+.+ ..+.++|+..++. ..+
T Consensus 194 ~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~-~~L 272 (419)
T PRK04043 194 KWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL-TQI 272 (419)
T ss_pred EECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcE-EEc
Confidence 58999985 6644443 4588888875544444445555667789999986654 3333 4677888877764 334
Q ss_pred ecCCCCeEEEEEcCCCc-EEE-EeCCC--cEEEEeCCCCee
Q psy3840 76 SFHSAPALDVDWQSNTS-FAS-CSTDQ--HIHVCKLHSDKP 112 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~~~-~~~-~~~d~--~i~i~d~~~~~~ 112 (131)
...........|+||++ ++. ....+ .|++.|+.+++.
T Consensus 273 T~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~ 313 (419)
T PRK04043 273 TNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSV 313 (419)
T ss_pred ccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCe
Confidence 33333334567999986 433 33333 588888877654
No 275
>KOG4640|consensus
Probab=98.50 E-value=1.9e-06 Score=58.74 Aligned_cols=78 Identities=14% Similarity=0.161 Sum_probs=68.7
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeE-EEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeE
Q psy3840 37 KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL-DVDWQSNTS-FASCSTDQHIHVCKLHSDKPVK 114 (131)
Q Consensus 37 ~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~ 114 (131)
...+..+.|+|.-.++|.+..+|.+.+..+. .+.+.+++.+...+. +++|.|||+ ++.|-.||+|++.|..++..+.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 3467889999999999999999999999988 778888886666666 999999999 7889999999999999998777
Q ss_pred E
Q psy3840 115 S 115 (131)
Q Consensus 115 ~ 115 (131)
.
T Consensus 99 ~ 99 (665)
T KOG4640|consen 99 S 99 (665)
T ss_pred c
Confidence 6
No 276
>KOG2066|consensus
Probab=98.48 E-value=5.3e-06 Score=58.04 Aligned_cols=110 Identities=15% Similarity=0.219 Sum_probs=76.4
Q ss_pred CCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCC-----CCEEEEEeCCCcEEEEECC--CcceeeeeecC
Q psy3840 6 NNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKR-----GNYILSAGVDKTTIIWDAA--SGQCEQQFSFH 78 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~s~~~d~~i~~~d~~--~~~~~~~~~~~ 78 (131)
.+|+++++|+.||+|.+..+......+......++.+++++|+ .+.+++|+..| +.++.-+ ..+....+...
T Consensus 81 ~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~ 159 (846)
T KOG2066|consen 81 LEGEYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEG 159 (846)
T ss_pred cCCceEEEecCCCcEEEeeccCCccceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecC
Confidence 3689999999999999877653332232334568999999997 46799999988 6665422 12222245556
Q ss_pred CCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEec
Q psy3840 79 SAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
.++|.++.|. |.+++=..|-.|++||+.+.+.+..+..
T Consensus 160 eG~I~~i~W~--g~lIAWand~Gv~vyd~~~~~~l~~i~~ 197 (846)
T KOG2066|consen 160 EGPIHSIKWR--GNLIAWANDDGVKVYDTPTRQRLTNIPP 197 (846)
T ss_pred ccceEEEEec--CcEEEEecCCCcEEEeccccceeeccCC
Confidence 7899999994 3444444555689999998888777653
No 277
>KOG0309|consensus
Probab=98.42 E-value=2.2e-06 Score=59.73 Aligned_cols=117 Identities=21% Similarity=0.317 Sum_probs=85.2
Q ss_pred CEEEEEeCCCeEEEEcCC----CCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCc-ceeeeeecCCCCe
Q psy3840 9 SFLATGSYDGYARIWTSD----GSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASG-QCEQQFSFHSAPA 82 (131)
Q Consensus 9 ~~l~~~~~d~~i~~~~~~----~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~-~~~~~~~~~~~~v 82 (131)
.+-++......-.+|++. ......+.+|...++.+.|+| ....+++++.|..+..||+++. ..+..........
T Consensus 82 ~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~a 161 (1081)
T KOG0309|consen 82 PYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAA 161 (1081)
T ss_pred ceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccC
Confidence 344444445556678864 344456788999999999999 5567889999999999999975 3455555555666
Q ss_pred EEEEEcCC-CcEEEEeCCCcEEEEeCCCC-eeeEEEecccceEEE
Q psy3840 83 LDVDWQSN-TSFASCSTDQHIHVCKLHSD-KPVKSFEGHTRVYYL 125 (131)
Q Consensus 83 ~~~~~~~~-~~~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~ 125 (131)
..++|+.. +.+++.+..+.|.+||++.| .++..+++|...++.
T Consensus 162 sqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~ 206 (1081)
T KOG0309|consen 162 SQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNS 206 (1081)
T ss_pred ceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeeh
Confidence 77899764 55666677788999999987 577778877655543
No 278
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.41 E-value=5.4e-05 Score=48.62 Aligned_cols=107 Identities=16% Similarity=0.369 Sum_probs=77.0
Q ss_pred cccCCCCEEEEEeC-CCeEEEEcCC--CCcee--eccccccc----------EEEEEEcCCCCEEEEEeC-CCcEEEEEC
Q psy3840 3 SSRNNGSFLATGSY-DGYARIWTSD--GSLKS--TLGQHKGP----------IFALKWNKRGNYILSAGV-DKTTIIWDA 66 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~i~~~~~~--~~~~~--~~~~~~~~----------i~~~~~~~~~~~~~s~~~-d~~i~~~d~ 66 (131)
+.++++++++++.. .|.|.++.++ |.... ....|.+. +....+.|+++++++.+. --.+.+|++
T Consensus 95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~ 174 (346)
T COG2706 95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDL 174 (346)
T ss_pred EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEc
Confidence 45788999999877 6789999875 32211 12234444 888999999999988765 357899999
Q ss_pred CCcceeeee---ecCCCCeEEEEEcCCCc--EEEEeCCCcEEEEeCCC
Q psy3840 67 ASGQCEQQF---SFHSAPALDVDWQSNTS--FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 67 ~~~~~~~~~---~~~~~~v~~~~~~~~~~--~~~~~~d~~i~i~d~~~ 109 (131)
..++....- .........|.|+|+++ .+..--+++|.+|....
T Consensus 175 ~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~ 222 (346)
T COG2706 175 DDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP 222 (346)
T ss_pred ccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence 977643221 12345678899999998 45666789999998876
No 279
>KOG1334|consensus
Probab=98.40 E-value=2e-06 Score=57.05 Aligned_cols=111 Identities=23% Similarity=0.372 Sum_probs=86.7
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeec-ccccccEEEEEEcC--CCCEEEEEeCCCcEEEEECCC-cce--eeeee
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTL-GQHKGPIFALKWNK--RGNYILSAGVDKTTIIWDAAS-GQC--EQQFS 76 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~-~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~-~~~--~~~~~ 76 (131)
|+..|..+++|+.|..|.+||=. +.....+ .+|...|..-.|-| +.+.+++.+.||.+++=.+.. +.. ...+.
T Consensus 150 FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~ 229 (559)
T KOG1334|consen 150 FNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLA 229 (559)
T ss_pred ecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecceecc
Confidence 67789999999999999999944 5544443 57888888888988 567889999999999866543 322 34455
Q ss_pred cCCCCeEEEEEcCCCc--EEEEeCCCcEEEEeCCCCeeeE
Q psy3840 77 FHSAPALDVDWQSNTS--FASCSTDQHIHVCKLHSDKPVK 114 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~--~~~~~~d~~i~i~d~~~~~~~~ 114 (131)
.|.+++..++..|+.. |.+++.|+.+.-+|++...+-.
T Consensus 230 ~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~ 269 (559)
T KOG1334|consen 230 PHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAE 269 (559)
T ss_pred cccCccceeeecCCCCCcccccccccceeeeeeccCCccc
Confidence 6888999999999743 9999999999999998775433
No 280
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.39 E-value=4.9e-05 Score=56.31 Aligned_cols=110 Identities=6% Similarity=-0.030 Sum_probs=69.9
Q ss_pred ccC-CCCEEEEEeCCCeEEEEcCCCCceeecccc---------------cccEEEEEEcCCCCE-EEEEeCCCcEEEEEC
Q psy3840 4 SRN-NGSFLATGSYDGYARIWTSDGSLKSTLGQH---------------KGPIFALKWNKRGNY-ILSAGVDKTTIIWDA 66 (131)
Q Consensus 4 ~~~-~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~---------------~~~i~~~~~~~~~~~-~~s~~~d~~i~~~d~ 66 (131)
++| ++..+++...++.|++||.....+..+.+. -.....++++|++.. +++...++.|++||+
T Consensus 690 ~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~ 769 (1057)
T PLN02919 690 FEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDL 769 (1057)
T ss_pred EecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEEC
Confidence 456 445556656678899999764333222110 123456899999884 455556789999999
Q ss_pred CCcceeeee-------------ec--------CCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeee
Q psy3840 67 ASGQCEQQF-------------SF--------HSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 67 ~~~~~~~~~-------------~~--------~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~ 113 (131)
.++...... .. .-.....+++++++. +++...++.|++||..++...
T Consensus 770 ~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~ 838 (1057)
T PLN02919 770 KTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVT 838 (1057)
T ss_pred CCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEE
Confidence 875432110 00 011346788999887 566677889999999876544
No 281
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.38 E-value=0.00016 Score=47.32 Aligned_cols=110 Identities=7% Similarity=0.025 Sum_probs=77.7
Q ss_pred CCCEEEEEeCC-----CeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeC----------CCcEEEEECCCcc
Q psy3840 7 NGSFLATGSYD-----GYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGV----------DKTTIIWDAASGQ 70 (131)
Q Consensus 7 ~~~~l~~~~~d-----~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~----------d~~i~~~d~~~~~ 70 (131)
++.++++-... ++|.+.|.. ++.+.++..-..+- .+ ++|+++.++.+.. +..|.+||..+.+
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~ 88 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHL 88 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCc
Confidence 44555554443 789999987 55555555433333 34 8999998777655 7889999999999
Q ss_pred eeeeeecCCC-------CeEEEEEcCCCc-EEEEe-C-CCcEEEEeCCCCeeeEEEec
Q psy3840 71 CEQQFSFHSA-------PALDVDWQSNTS-FASCS-T-DQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 71 ~~~~~~~~~~-------~v~~~~~~~~~~-~~~~~-~-d~~i~i~d~~~~~~~~~~~~ 118 (131)
.+..+..... ....++++|+++ ++... . +..+.+.|+.+++.+.++..
T Consensus 89 ~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v 146 (352)
T TIGR02658 89 PIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV 146 (352)
T ss_pred EEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC
Confidence 9887764222 234688899988 54444 3 68899999999988887754
No 282
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.37 E-value=4.6e-05 Score=50.31 Aligned_cols=109 Identities=11% Similarity=0.005 Sum_probs=74.0
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC-CeEEE
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA-PALDV 85 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~v~~~ 85 (131)
+..+++++.+|.+..+|.. ++.+..... .. .... ...+..++.++.+|.+..+|..+++.+........ .....
T Consensus 241 ~~~vy~~~~~g~l~a~d~~tG~~~W~~~~-~~-~~~p--~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp 316 (377)
T TIGR03300 241 GGQVYAVSYQGRVAALDLRSGRVLWKRDA-SS-YQGP--AVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAP 316 (377)
T ss_pred CCEEEEEEcCCEEEEEECCCCcEEEeecc-CC-ccCc--eEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccC
Confidence 4677778889999999986 665554431 11 1111 12466778888999999999999987765532111 11222
Q ss_pred EEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEecccc
Q psy3840 86 DWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTR 121 (131)
Q Consensus 86 ~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 121 (131)
.. .++.+++++.+|.++++|.++++.+.+++.+..
T Consensus 317 ~i-~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~ 351 (377)
T TIGR03300 317 AV-VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGS 351 (377)
T ss_pred EE-ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCC
Confidence 22 245688889999999999999999988875543
No 283
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.37 E-value=7.9e-07 Score=56.20 Aligned_cols=116 Identities=14% Similarity=0.183 Sum_probs=78.3
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC---CC-ceeecccc-----cccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcce-
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD---GS-LKSTLGQH-----KGPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQC- 71 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~---~~-~~~~~~~~-----~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~- 71 (131)
+++.|.+.++++ .|-.|.+|++. +. .+..++.| +..|++..|+| ..+.+.-.+..|.|++-|++....
T Consensus 179 S~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alc 257 (460)
T COG5170 179 SFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALC 257 (460)
T ss_pred eecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhc
Confidence 356667777776 57789999976 21 12222333 45788889999 455666777899999999984321
Q ss_pred -----eee----------eecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCC-eeeEEEecc
Q psy3840 72 -----EQQ----------FSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSD-KPVKSFEGH 119 (131)
Q Consensus 72 -----~~~----------~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~~ 119 (131)
+.. +.+....+..+.|+++|+++.+..-.++++||.+.. .++.++..|
T Consensus 258 dn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi~~h 321 (460)
T COG5170 258 DNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTIPMH 321 (460)
T ss_pred cCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceeechH
Confidence 111 112235688899999999777666779999999865 566666444
No 284
>KOG1334|consensus
Probab=98.35 E-value=1.3e-06 Score=57.88 Aligned_cols=107 Identities=15% Similarity=0.243 Sum_probs=82.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC---C----------Cceee-cccccc--cEEEEE-EcCCCCEEEEEeCCCcEEEEE
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD---G----------SLKST-LGQHKG--PIFALK-WNKRGNYILSAGVDKTTIIWD 65 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~---~----------~~~~~-~~~~~~--~i~~~~-~~~~~~~~~s~~~d~~i~~~d 65 (131)
.|+.++.-+++.-.|-.|++++-. | ..+.. +++|.. .|..+. |-|...++++|+.-|.|.+|+
T Consensus 343 ~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~ 422 (559)
T KOG1334|consen 343 VYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWD 422 (559)
T ss_pred EecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEe
Confidence 366566666666678889999644 3 22233 677764 466676 467899999999999999999
Q ss_pred CCCcceeeeeecCCCCeEEEEEcCC-CcEEEEeCCCcEEEEeCCC
Q psy3840 66 AASGQCEQQFSFHSAPALDVDWQSN-TSFASCSTDQHIHVCKLHS 109 (131)
Q Consensus 66 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~d~~i~i~d~~~ 109 (131)
-.+++.+.-+.+.+.-|+|+.-+|- ..|++++-|..|+||-..+
T Consensus 423 K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 423 KKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred cchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCc
Confidence 9999998888887778888888886 4589999999999998743
No 285
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.34 E-value=2.2e-06 Score=36.62 Aligned_cols=37 Identities=38% Similarity=0.700 Sum_probs=31.8
Q ss_pred ceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy3840 29 LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65 (131)
Q Consensus 29 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d 65 (131)
....+..|...+.++.|++++..+++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3445567888999999999989999999999999996
No 286
>KOG2041|consensus
Probab=98.33 E-value=5.4e-06 Score=57.84 Aligned_cols=102 Identities=17% Similarity=0.411 Sum_probs=77.6
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC---------C-------CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD---------G-------SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA 66 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~---------~-------~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~ 66 (131)
+|+....++++|+.||.+++-.+. | ..-.++.+|.+.|..+.|+.+.+.+-+.+.+|.|.+|-+
T Consensus 21 ~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWml 100 (1189)
T KOG2041|consen 21 EWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWML 100 (1189)
T ss_pred EEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCceEEEEee
Confidence 588899999999999999987543 1 112467899999999999999999999999999999998
Q ss_pred CCcceeeee--ecCCCCeEEEEEcCCCc-EEEEeCCCcEEE
Q psy3840 67 ASGQCEQQF--SFHSAPALDVDWQSNTS-FASCSTDQHIHV 104 (131)
Q Consensus 67 ~~~~~~~~~--~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i 104 (131)
-++.=...+ ......|.+++|..+|. +...-.||.|.+
T Consensus 101 ykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIV 141 (1189)
T KOG2041|consen 101 YKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIV 141 (1189)
T ss_pred ecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEE
Confidence 776432222 12345688999988875 666666666543
No 287
>KOG4532|consensus
Probab=98.32 E-value=5.3e-05 Score=47.23 Aligned_cols=100 Identities=13% Similarity=0.125 Sum_probs=68.5
Q ss_pred EEEEEeCCCeEEEEcCCCCceeecccccc--cEEEEEEcCCCCEEEEEeCCCcEEEEECCC-cceeeeee--cCCCCeEE
Q psy3840 10 FLATGSYDGYARIWTSDGSLKSTLGQHKG--PIFALKWNKRGNYILSAGVDKTTIIWDAAS-GQCEQQFS--FHSAPALD 84 (131)
Q Consensus 10 ~l~~~~~d~~i~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~-~~~~~~~~--~~~~~v~~ 84 (131)
.+..++.|.++++.++++..... ..|.. ...++.++++++++++.+....+..|.+.. ++.+.... ...+.-.+
T Consensus 130 ~~~i~sndht~k~~~~~~~s~~~-~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~ 208 (344)
T KOG4532|consen 130 PLNIASNDHTGKTMVVSGDSNKF-AVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFY 208 (344)
T ss_pred ceeeccCCcceeEEEEecCcccc-eeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCcee
Confidence 45556677778877766333221 11322 267889999999999999999999998864 33333322 22334456
Q ss_pred EEEcCCCc-EEEEeCCCcEEEEeCCCC
Q psy3840 85 VDWQSNTS-FASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 85 ~~~~~~~~-~~~~~~d~~i~i~d~~~~ 110 (131)
..|+.... ++++..||++.|||+|..
T Consensus 209 ~S~s~~~~~FAv~~Qdg~~~I~DVR~~ 235 (344)
T KOG4532|consen 209 NSFSENDLQFAVVFQDGTCAIYDVRNM 235 (344)
T ss_pred eeeccCcceEEEEecCCcEEEEEeccc
Confidence 67776654 999999999999999865
No 288
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.32 E-value=5.7e-05 Score=49.86 Aligned_cols=109 Identities=11% Similarity=0.103 Sum_probs=74.0
Q ss_pred CCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEE
Q psy3840 7 NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDV 85 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~ 85 (131)
.+..+++++.++.+..+|.. |+.+.............. .++..++.++.++.++.+|..+|+.+...... ..+.+.
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~ 140 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLS-SEVLSP 140 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccC-ceeecC
Confidence 46688888889999999965 777665543332111222 25677888889999999999999987765532 222211
Q ss_pred EEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEec
Q psy3840 86 DWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 86 ~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
....++.++.+..++.++.+|.++++.+.++..
T Consensus 141 p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 173 (377)
T TIGR03300 141 PLVANGLVVVRTNDGRLTALDAATGERLWTYSR 173 (377)
T ss_pred CEEECCEEEEECCCCeEEEEEcCCCceeeEEcc
Confidence 111245677778899999999999988776543
No 289
>KOG1354|consensus
Probab=98.30 E-value=1.3e-05 Score=51.39 Aligned_cols=105 Identities=19% Similarity=0.317 Sum_probs=73.2
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC--CC----ceeecccc------------cccEEEEEEcCCC--CEEEEEeCCCcEEE
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD--GS----LKSTLGQH------------KGPIFALKWNKRG--NYILSAGVDKTTII 63 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~--~~----~~~~~~~~------------~~~i~~~~~~~~~--~~~~s~~~d~~i~~ 63 (131)
|..+|++|++|+.+|.|-+|.-. .+ ....++.| ..+|..+.|.+++ ..++....|.++++
T Consensus 33 f~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNdktiKl 112 (433)
T KOG1354|consen 33 FDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDKTIKL 112 (433)
T ss_pred eecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCCcceee
Confidence 67789999999999999998643 21 22233333 3567888998854 46777889999999
Q ss_pred EECCCccee-----------------------------------eee-ecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeC
Q psy3840 64 WDAASGQCE-----------------------------------QQF-SFHSAPALDVDWQSNTSFASCSTDQHIHVCKL 107 (131)
Q Consensus 64 ~d~~~~~~~-----------------------------------~~~-~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~ 107 (131)
|-+...... +.+ ..|...+.++.++.|.......+|-.|.+|++
T Consensus 113 WKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSADdLRINLWnl 192 (433)
T KOG1354|consen 113 WKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSADDLRINLWNL 192 (433)
T ss_pred eeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeeccceeeeeccc
Confidence 987642110 000 13455688899988877555667888999998
Q ss_pred C
Q psy3840 108 H 108 (131)
Q Consensus 108 ~ 108 (131)
.
T Consensus 193 e 193 (433)
T KOG1354|consen 193 E 193 (433)
T ss_pred c
Confidence 6
No 290
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.30 E-value=0.00011 Score=49.42 Aligned_cols=107 Identities=11% Similarity=0.043 Sum_probs=65.9
Q ss_pred cccCCCCEEEEEeC-C--CeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEe-CCC--cEEEEECCCcceeeeee
Q psy3840 3 SSRNNGSFLATGSY-D--GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG-VDK--TTIIWDAASGQCEQQFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d--~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~--~i~~~d~~~~~~~~~~~ 76 (131)
.|+|||+.++.... + ..|.++++.+.....+..+.+......|+|+|+.++-.+ ..+ .|++.|+.+++......
T Consensus 239 ~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~ 318 (419)
T PRK04043 239 DVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF 318 (419)
T ss_pred EECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc
Confidence 48999987765433 3 357777877555555554444334568999998766544 333 57778887776533322
Q ss_pred cCCCCeEEEEEcCCCc-EEEEeCC---------CcEEEEeCCCCee
Q psy3840 77 FHSAPALDVDWQSNTS-FASCSTD---------QHIHVCKLHSDKP 112 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~~d---------~~i~i~d~~~~~~ 112 (131)
. .. ....|+|+++ ++..... ..|.+.|+.+++.
T Consensus 319 ~-g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~ 361 (419)
T PRK04043 319 H-GK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI 361 (419)
T ss_pred C-CC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe
Confidence 1 11 1248999987 4433322 3688888877653
No 291
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.30 E-value=0.00012 Score=47.89 Aligned_cols=106 Identities=12% Similarity=0.265 Sum_probs=72.0
Q ss_pred cccCCCCEEEEEeC-CCeEEEEcCC--CCceee--cc-----------cccccEEEEEEcCCCCEEEEEeC-CCcEEEEE
Q psy3840 3 SSRNNGSFLATGSY-DGYARIWTSD--GSLKST--LG-----------QHKGPIFALKWNKRGNYILSAGV-DKTTIIWD 65 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~i~~~~~~--~~~~~~--~~-----------~~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d 65 (131)
+.+|++++++++.. +|.|.++++. +..... .. .-.....++.++|+++++++.+. ...|.+|+
T Consensus 93 ~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~ 172 (345)
T PF10282_consen 93 AVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYD 172 (345)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEE
T ss_pred EEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEE
Confidence 35789999999876 8899999986 322221 11 11245688999999998887754 56799999
Q ss_pred CCCcc--ee--eeee-cCCCCeEEEEEcCCCc--EEEEeCCCcEEEEeCC
Q psy3840 66 AASGQ--CE--QQFS-FHSAPALDVDWQSNTS--FASCSTDQHIHVCKLH 108 (131)
Q Consensus 66 ~~~~~--~~--~~~~-~~~~~v~~~~~~~~~~--~~~~~~d~~i~i~d~~ 108 (131)
+.... .. ..+. ........+.|+|+++ +++...++.|.++++.
T Consensus 173 ~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~ 222 (345)
T PF10282_consen 173 IDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD 222 (345)
T ss_dssp E-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred EeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence 87654 21 2222 2345678999999976 4666678889999987
No 292
>KOG2314|consensus
Probab=98.29 E-value=1.9e-05 Score=53.48 Aligned_cols=105 Identities=17% Similarity=0.319 Sum_probs=75.1
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeC-----------CCcEEEEECCCcc
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGV-----------DKTTIIWDAASGQ 70 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-----------d~~i~~~d~~~~~ 70 (131)
.|||-|.+|++-...| |.+|--. ...+..+ .|+ .+..+.|||..++|++-+. ...+.+||+++|.
T Consensus 217 ~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF-~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~ 293 (698)
T KOG2314|consen 217 RWSPKGTYLVTFHKQG-IALWGGESFDRIQRF-YHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGL 293 (698)
T ss_pred EecCCceEEEEEeccc-eeeecCccHHHHHhc-cCC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccc
Confidence 3799999999987665 7888744 2222222 244 5789999999999998542 2468999999999
Q ss_pred eeeeeecCC--CCeE-EEEEcCCCcEEEEeCCCcEEEEeCCCC
Q psy3840 71 CEQQFSFHS--APAL-DVDWQSNTSFASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 71 ~~~~~~~~~--~~v~-~~~~~~~~~~~~~~~d~~i~i~d~~~~ 110 (131)
..+.+.... ...+ -..|+.|+++++.-....|.||+..+.
T Consensus 294 lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf 336 (698)
T KOG2314|consen 294 LKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSF 336 (698)
T ss_pred hhcceeccCCCccccceEEeccCCceeEEeccceEEEEecCce
Confidence 888877632 2333 457999988666666678889887653
No 293
>KOG1912|consensus
Probab=98.28 E-value=3.8e-05 Score=54.12 Aligned_cols=116 Identities=13% Similarity=0.205 Sum_probs=88.2
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCC------------CEEEEEeCCCcEEEEECCCcc
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRG------------NYILSAGVDKTTIIWDAASGQ 70 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~------------~~~~s~~~d~~i~~~d~~~~~ 70 (131)
|+| +..||.|+. ..|.+-|.. -+.+..+..|...|..+.|.|.. -.+++++..|.|.+||...+.
T Consensus 23 w~~-~GLiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s 100 (1062)
T KOG1912|consen 23 WSP-SGLIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLAS 100 (1062)
T ss_pred cCc-cceEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhh
Confidence 454 456666664 357777754 67777888899999999998731 256778889999999999998
Q ss_pred eeeeeecCCCCeEEEEEcC---CCc--EEEEeCCCcEEEEeCCCCeeeEEEecccc
Q psy3840 71 CEQQFSFHSAPALDVDWQS---NTS--FASCSTDQHIHVCKLHSDKPVKSFEGHTR 121 (131)
Q Consensus 71 ~~~~~~~~~~~v~~~~~~~---~~~--~~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 121 (131)
.+..+..+..++..++|-+ +.+ ++.-.....+.+|+..+|+.+..+..-..
T Consensus 101 ~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~ 156 (1062)
T KOG1912|consen 101 VINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHE 156 (1062)
T ss_pred hhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCc
Confidence 8888888889999999965 343 45555667899999999999888764333
No 294
>KOG4497|consensus
Probab=98.22 E-value=4e-05 Score=49.06 Aligned_cols=99 Identities=12% Similarity=0.211 Sum_probs=76.1
Q ss_pred ccccCCCCEEEEEeC--CCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCC
Q psy3840 2 QSSRNNGSFLATGSY--DGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 2 ~~~~~~~~~l~~~~~--d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
.+|++|..++++-.+ -+.+-+||++...+........+|....|+|....++.+.....+++|.+.-. .....+...
T Consensus 324 lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg~srLY~W~psg~-~~V~vP~~G 402 (447)
T KOG4497|consen 324 LAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGP-RVVGVPKKG 402 (447)
T ss_pred eeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcCCceEEEEcCCCc-eEEecCCCC
Confidence 478999999998654 23588999987766666667779999999998888888878888999997553 333344455
Q ss_pred CCeEEEEEcCCCc-EEEEeCCCc
Q psy3840 80 APALDVDWQSNTS-FASCSTDQH 101 (131)
Q Consensus 80 ~~v~~~~~~~~~~-~~~~~~d~~ 101 (131)
..|..+.|.-+|. ++..+.|..
T Consensus 403 F~i~~l~W~~~g~~i~l~~kDaf 425 (447)
T KOG4497|consen 403 FNIQKLQWLQPGEFIVLCGKDAF 425 (447)
T ss_pred ceeeeEEecCCCcEEEEEcCCce
Confidence 7899999988776 777777764
No 295
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.22 E-value=7e-05 Score=46.10 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=73.9
Q ss_pred CCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeee-ecCCC----
Q psy3840 7 NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF-SFHSA---- 80 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~-~~~~~---- 80 (131)
++..+++++.++.+..||.. |+.+..... .+.+.... ...+..++.+..++.++.+|..+|+.+... .....
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~ 112 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGV 112 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCST
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeecccccccccc
Confidence 56778888889999999984 776665543 22111111 224566677778889999999999988774 32211
Q ss_pred -CeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEeccc
Q psy3840 81 -PALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120 (131)
Q Consensus 81 -~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~ 120 (131)
......+. ++.++.+..++.+..+|+++|+.+..+....
T Consensus 113 ~~~~~~~~~-~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 113 RSSSSPAVD-GDRLYVGTSSGKLVALDPKTGKLLWKYPVGE 152 (238)
T ss_dssp B--SEEEEE-TTEEEEEETCSEEEEEETTTTEEEEEEESST
T ss_pred ccccCceEe-cCEEEEEeccCcEEEEecCCCcEEEEeecCC
Confidence 11122222 3447777779999999999999988886543
No 296
>KOG1275|consensus
Probab=98.21 E-value=1.6e-05 Score=56.61 Aligned_cols=98 Identities=18% Similarity=0.268 Sum_probs=76.3
Q ss_pred CCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeC---------CCcEEEEECCCcceeeee
Q psy3840 6 NNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGV---------DKTTIIWDAASGQCEQQF 75 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~---------d~~i~~~d~~~~~~~~~~ 75 (131)
.+++.+.+|...|+|.+-|.+ .+.++++..|++.+..+ +-.|+.+++++. |..+++||++..+.+..+
T Consensus 185 ~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf--Dv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI 262 (1118)
T KOG1275|consen 185 YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF--DVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPI 262 (1118)
T ss_pred ecCcEEEeecccceEEeecCCcCceeeeeeccccceeee--eccCCeEEEeecccccccccccchhhhhhhhhhhccCCc
Confidence 467889999999999999987 78889999999988765 456999998863 566889999998877776
Q ss_pred ecCCCCeEEEEEcCC--CcEEEEeCCCcEEEEe
Q psy3840 76 SFHSAPALDVDWQSN--TSFASCSTDQHIHVCK 106 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~--~~~~~~~~d~~i~i~d 106 (131)
+.+.++ .-+.|+|. .+++.++..|...+-|
T Consensus 263 ~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd 294 (1118)
T KOG1275|consen 263 QFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVD 294 (1118)
T ss_pred ccccCc-hhhhhcccccceEEEEecccceeecc
Confidence 655444 44667775 3477777777777777
No 297
>KOG3617|consensus
Probab=98.20 E-value=8.4e-06 Score=57.93 Aligned_cols=107 Identities=13% Similarity=0.251 Sum_probs=82.7
Q ss_pred CccccCCCCEEEEEeC----CCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee
Q psy3840 1 MQSSRNNGSFLATGSY----DGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 76 (131)
Q Consensus 1 ~~~~~~~~~~l~~~~~----d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 76 (131)
|.+|+|...++++++- .|.|.||--.|++-... ..+-.+.+++|+|..-.+++|-..|.+.+|...+.+.-....
T Consensus 20 i~SWHPsePlfAVA~fS~er~GSVtIfadtGEPqr~V-t~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~ 98 (1416)
T KOG3617|consen 20 ISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDV-TYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVE 98 (1416)
T ss_pred ccccCCCCceeEEEEecCCCCceEEEEecCCCCCccc-ccceehhhhccChHHHHHhhccccceeEEEecCCceeeeecc
Confidence 4579999999998864 56788886555543221 122235679999998889999899999999987776555555
Q ss_pred cCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCC
Q psy3840 77 FHSAPALDVDWQSNTS-FASCSTDQHIHVCKLH 108 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~ 108 (131)
.|..++..+.|+++|. ++++..-|.+.+|...
T Consensus 99 th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 99 THPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred CCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 6888999999999977 8898888999999875
No 298
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.19 E-value=7.9e-05 Score=54.50 Aligned_cols=107 Identities=21% Similarity=0.416 Sum_probs=74.1
Q ss_pred cccCCCCEEEEEeC---C---CeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC---CCcEEEEECCCcceee
Q psy3840 3 SSRNNGSFLATGSY---D---GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV---DKTTIIWDAASGQCEQ 73 (131)
Q Consensus 3 ~~~~~~~~l~~~~~---d---~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~---d~~i~~~d~~~~~~~~ 73 (131)
+|..||+++|+.+- . ..+++|+-+|....+...-.+--.+++|.|.|+++++.-. ...|.+|. ++|-.-.
T Consensus 216 SWRGDG~yFAVss~~~~~~~~R~iRVy~ReG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhg 294 (928)
T PF04762_consen 216 SWRGDGEYFAVSSVEPETGSRRVIRVYSREGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHG 294 (928)
T ss_pred EECCCCcEEEEEEEEcCCCceeEEEEECCCceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEee
Confidence 47889999999874 3 4699999887665555544455568899999999998765 23455555 4554433
Q ss_pred eee----cCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCe
Q psy3840 74 QFS----FHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 74 ~~~----~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~ 111 (131)
.+. .....+..+.|++++. |+..- ...|++|-..+..
T Consensus 295 eF~l~~~~~~~~v~~l~Wn~ds~iLAv~~-~~~vqLWt~~NYH 336 (928)
T PF04762_consen 295 EFTLRFDPEEEKVIELAWNSDSEILAVWL-EDRVQLWTRSNYH 336 (928)
T ss_pred eEecCCCCCCceeeEEEECCCCCEEEEEe-cCCceEEEeeCCE
Confidence 332 2345789999999988 55444 4449999877654
No 299
>KOG2315|consensus
Probab=98.19 E-value=9.8e-05 Score=49.99 Aligned_cols=96 Identities=14% Similarity=0.235 Sum_probs=68.4
Q ss_pred eEEEEcCCCCceeecccccccEEEEEEcCCCCEEEE--EeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEE
Q psy3840 19 YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILS--AGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FAS 95 (131)
Q Consensus 19 ~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s--~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~ 95 (131)
++++.+++|.....-....++|.++.|+|+++-+++ |-.--.+.+||++ ++.+..+. .++-+++-|+|.|+ ++.
T Consensus 252 ~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~--egpRN~~~fnp~g~ii~l 328 (566)
T KOG2315|consen 252 TLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP--EGPRNTAFFNPHGNIILL 328 (566)
T ss_pred eEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC--CCCccceEECCCCCEEEE
Confidence 466666664444433445789999999999987665 4456788899975 44454444 45668899999988 555
Q ss_pred EeC---CCcEEEEeCCCCeeeEEEe
Q psy3840 96 CST---DQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 96 ~~~---d~~i~i~d~~~~~~~~~~~ 117 (131)
++- .|.+-|||..+.+++..+.
T Consensus 329 AGFGNL~G~mEvwDv~n~K~i~~~~ 353 (566)
T KOG2315|consen 329 AGFGNLPGDMEVWDVPNRKLIAKFK 353 (566)
T ss_pred eecCCCCCceEEEeccchhhccccc
Confidence 554 4689999999887777664
No 300
>KOG2444|consensus
Probab=98.13 E-value=2.9e-05 Score=47.10 Aligned_cols=103 Identities=11% Similarity=0.060 Sum_probs=68.0
Q ss_pred CCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEc-CCCCEEEEEeCCCcEEEEECCCcceeeeeecCC-CCe
Q psy3840 7 NGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWN-KRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-APA 82 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~~v 82 (131)
-+..+++|+.+|.|.+|+.. +........-...+.++.-. .++.+..++..++.|+.|+...++.+.....|. .+.
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~ 148 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG 148 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc
Confidence 35788999999999998865 44433333333444444322 255688899999999999999888877766666 344
Q ss_pred EEEEEcCC-CcEEEE--eCCCcEEEEeCCC
Q psy3840 83 LDVDWQSN-TSFASC--STDQHIHVCKLHS 109 (131)
Q Consensus 83 ~~~~~~~~-~~~~~~--~~d~~i~i~d~~~ 109 (131)
........ ..+... +.|..++.|++..
T Consensus 149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 149 EELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ceeEEecCCceEEeeccccchhhhhcchhh
Confidence 43333333 335555 6777788887754
No 301
>KOG2079|consensus
Probab=98.12 E-value=2.5e-05 Score=56.51 Aligned_cols=94 Identities=20% Similarity=0.306 Sum_probs=69.6
Q ss_pred CCEEEEEeCCCeEEEEcCCCCce--eecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEE
Q psy3840 8 GSFLATGSYDGYARIWTSDGSLK--STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDV 85 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~ 85 (131)
+..++.|+..|.+-..|..+..- ..=..-.++|++++|+.+|+.++.|-.+|.|.+||...++....+..+..+...+
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~v 178 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGV 178 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceE
Confidence 34577788888888877665432 2222345799999999999999999999999999999999888887766665544
Q ss_pred E---EcCCCc-EEEEeCCCc
Q psy3840 86 D---WQSNTS-FASCSTDQH 101 (131)
Q Consensus 86 ~---~~~~~~-~~~~~~d~~ 101 (131)
- +..++. ++++...|.
T Consensus 179 i~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 179 IFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred EEEEEeCCCcEEEEccCCCc
Confidence 3 344444 777777776
No 302
>KOG0309|consensus
Probab=98.12 E-value=7.1e-06 Score=57.35 Aligned_cols=104 Identities=18% Similarity=0.308 Sum_probs=78.9
Q ss_pred CCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCc-ceeeeeecCCCCeE
Q psy3840 7 NGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASG-QCEQQFSFHSAPAL 83 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~-~~~~~~~~~~~~v~ 83 (131)
....+++++.|..++.||+. ..++............++|+-....++..+..+.+.+||.+.+ .++..++++...+.
T Consensus 126 ~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn 205 (1081)
T KOG0309|consen 126 HPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVN 205 (1081)
T ss_pred CCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeee
Confidence 45688999999999999987 4445555555556688899985555555556678999999975 45667777777888
Q ss_pred EEEEcCC--CcEEEEeCCCcEEEEeCCCC
Q psy3840 84 DVDWQSN--TSFASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 84 ~~~~~~~--~~~~~~~~d~~i~i~d~~~~ 110 (131)
.+.|..- +.+.+++.|++|+.||....
T Consensus 206 ~~~fnr~~~s~~~s~~~d~tvkfw~y~kS 234 (1081)
T KOG0309|consen 206 SIDFNRFKYSEIMSSSNDGTVKFWDYSKS 234 (1081)
T ss_pred hHHHhhhhhhhhcccCCCCceeeeccccc
Confidence 8888664 45889999999999997643
No 303
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.11 E-value=1.9e-05 Score=33.52 Aligned_cols=36 Identities=22% Similarity=0.336 Sum_probs=29.4
Q ss_pred eeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEe
Q psy3840 71 CEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCK 106 (131)
Q Consensus 71 ~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d 106 (131)
....+..+...+.++.|.+++. +++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 4455666778899999998765 88999999999996
No 304
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=98.10 E-value=0.00027 Score=38.38 Aligned_cols=89 Identities=12% Similarity=0.087 Sum_probs=59.6
Q ss_pred CEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEc
Q psy3840 9 SFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQ 88 (131)
Q Consensus 9 ~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~ 88 (131)
+.|++|+.|..|++|+-. ..+.+... .+.+.++.-... ..++.+..+|+|-+|+- ...+...+... .+.++++.
T Consensus 16 ~eLlvGs~D~~IRvf~~~-e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~RlWRiKSK~-~~~~~~~~ 89 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGD-EIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQRLWRIKSKN-QVTSMAFY 89 (111)
T ss_pred ceEEEecCCcEEEEEeCC-cEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeC--cceeeeeccCC-CeEEEEEE
Confidence 789999999999999853 33333333 346677665544 67899999999999975 33344455433 35555543
Q ss_pred -C--CCc--EEEEeCCCcEE
Q psy3840 89 -S--NTS--FASCSTDQHIH 103 (131)
Q Consensus 89 -~--~~~--~~~~~~d~~i~ 103 (131)
. ++. |++|-.+|.|-
T Consensus 90 D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 90 DINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred cCCCCCceEEEEEecCCeEE
Confidence 3 333 88888888764
No 305
>KOG2066|consensus
Probab=98.09 E-value=6.7e-05 Score=52.84 Aligned_cols=91 Identities=20% Similarity=0.292 Sum_probs=71.2
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEE
Q psy3840 7 NGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 86 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 86 (131)
.+..++-|+.+|.|++++..+.+ .+...|... ..+|.++++++.||++.+.-+-+.+....+.- ..++.+++
T Consensus 48 ~~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df-~rpiksia 119 (846)
T KOG2066|consen 48 HDKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDF-KRPIKSIA 119 (846)
T ss_pred hcceeeeccccceEEEEecCCcc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEec-CCcceeEE
Confidence 46889999999999999988776 444445433 56899999999999999998888777665553 46889999
Q ss_pred EcCC------CcEEEEeCCCcEEEEe
Q psy3840 87 WQSN------TSFASCSTDQHIHVCK 106 (131)
Q Consensus 87 ~~~~------~~~~~~~~d~~i~i~d 106 (131)
++|+ +++++|+..| +.++.
T Consensus 120 l~Pd~~~~~sk~fv~GG~ag-lvL~e 144 (846)
T KOG2066|consen 120 LHPDFSRQQSKQFVSGGMAG-LVLSE 144 (846)
T ss_pred eccchhhhhhhheeecCcce-EEEeh
Confidence 9997 2388888877 66654
No 306
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.06 E-value=0.00073 Score=42.06 Aligned_cols=122 Identities=14% Similarity=0.111 Sum_probs=74.4
Q ss_pred ccCCCCEEEEEeCC--------CeEEEEcCCCCceeecccccccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCcce---
Q psy3840 4 SRNNGSFLATGSYD--------GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYIL-SAGVDKTTIIWDAASGQC--- 71 (131)
Q Consensus 4 ~~~~~~~l~~~~~d--------~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-s~~~d~~i~~~d~~~~~~--- 71 (131)
+.++|++.++.... |.|..++..++ +......-.....++|+|+++.++ +-+..+.|..+++.....
T Consensus 93 vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~~-~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~ 171 (246)
T PF08450_consen 93 VDPDGNLYVTDSGGGGASGIDPGSVYRIDPDGK-VTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELS 171 (246)
T ss_dssp E-TTS-EEEEEECCBCTTCGGSEEEEEEETTSE-EEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEE
T ss_pred EcCCCCEEEEecCCCccccccccceEEECCCCe-EEEEecCcccccceEECCcchheeecccccceeEEEecccccccee
Confidence 46777766665443 34555565533 333333345568899999998765 555678888888853221
Q ss_pred -eeee---ecCCCCeEEEEEcCCCcE-EEEeCCCcEEEEeCCCCeeeEEEecc-cceEEEEe
Q psy3840 72 -EQQF---SFHSAPALDVDWQSNTSF-ASCSTDQHIHVCKLHSDKPVKSFEGH-TRVYYLAM 127 (131)
Q Consensus 72 -~~~~---~~~~~~v~~~~~~~~~~~-~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~ 127 (131)
...+ .......-.+++..++.+ ++.-..+.|.++|.+ |+.+..+... ..+.++++
T Consensus 172 ~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~f 232 (246)
T PF08450_consen 172 NRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAF 232 (246)
T ss_dssp EEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEE
T ss_pred eeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEE
Confidence 1122 222223678999999884 555567899999988 8888877655 44445444
No 307
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.03 E-value=0.00029 Score=49.07 Aligned_cols=104 Identities=12% Similarity=0.151 Sum_probs=73.1
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCC-----CceeecccccccEEEEEEcCCCCEEEEEeC-CCcEEEEECCCcce-----
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDG-----SLKSTLGQHKGPIFALKWNKRGNYILSAGV-DKTTIIWDAASGQC----- 71 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~~~~~~----- 71 (131)
.+.++|++...+ ++.|.+.|... ..+.....-......+.++|||++++.++. +.++.+.|+.+.+.
T Consensus 283 a~vkdGK~~~V~--gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~ 360 (635)
T PRK02888 283 EAVKAGKFKTIG--GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGK 360 (635)
T ss_pred HhhhCCCEEEEC--CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhcc
Confidence 345677766663 56799999764 333333334456688999999999887766 89999999987542
Q ss_pred -------eeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCC
Q psy3840 72 -------EQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 72 -------~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~ 109 (131)
...... .......+|.++|. +.+.--|..|..||+.+
T Consensus 361 ~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 361 IKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 222222 23445678888877 67777899999999875
No 308
>KOG4190|consensus
Probab=98.02 E-value=4.1e-06 Score=56.89 Aligned_cols=84 Identities=21% Similarity=0.334 Sum_probs=65.4
Q ss_pred eeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC-------cceeeeeecCCCCeEEEEEcCCCcEEEEeCCCcE
Q psy3840 30 KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS-------GQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHI 102 (131)
Q Consensus 30 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i 102 (131)
+..+.+|+..|+.+.--.+.+.+++++.|.++++|.++. ..+..+++.|+.++.++-|-.+.+.+ .+.|+.|
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i-~ScD~gi 806 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSI-ASCDGGI 806 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeecccee-eeccCcc
Confidence 345678999998887777888899999999999999874 23556778899999999998876522 3457889
Q ss_pred EEEeCCCCeeeE
Q psy3840 103 HVCKLHSDKPVK 114 (131)
Q Consensus 103 ~i~d~~~~~~~~ 114 (131)
++||.--++++.
T Consensus 807 HlWDPFigr~La 818 (1034)
T KOG4190|consen 807 HLWDPFIGRLLA 818 (1034)
T ss_pred eeecccccchhH
Confidence 999976665554
No 309
>KOG1832|consensus
Probab=97.96 E-value=6.3e-06 Score=58.82 Aligned_cols=110 Identities=18% Similarity=0.343 Sum_probs=82.5
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCC--cEEEEECCC-cceeeeeecC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDK--TTIIWDAAS-GQCEQQFSFH 78 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~--~i~~~d~~~-~~~~~~~~~~ 78 (131)
+|+.+.+.|++|+..|.|++|++. |........|..+++.+.-+.+|..+++.+.-. -..+|++.+ +....++
T Consensus 1108 afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf--- 1184 (1516)
T KOG1832|consen 1108 AFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSF--- 1184 (1516)
T ss_pred EeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccccCccccc---
Confidence 577888999999999999999987 777778889999999998888888777665543 355899865 3333333
Q ss_pred CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEE
Q psy3840 79 SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~ 116 (131)
....++.|+...+ -+.|+......+||+.++.++.++
T Consensus 1185 -~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~ty 1222 (1516)
T KOG1832|consen 1185 -DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTY 1222 (1516)
T ss_pred -cccceeehhhhHHHHHhcccccceEEEecccCcHHHHh
Confidence 2446778877644 455556667899999998777663
No 310
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.96 E-value=0.002 Score=43.54 Aligned_cols=102 Identities=15% Similarity=0.101 Sum_probs=77.8
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCC-cEEEEECCCcceeeeeecCCCCeEEE
Q psy3840 7 NGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDK-TTIIWDAASGQCEQQFSFHSAPALDV 85 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~-~i~~~d~~~~~~~~~~~~~~~~v~~~ 85 (131)
+|++++..+. |...+.+........ .++.+.|.-..+..+++.++.|..|| .+-++|.++++.. .+...-+.|.++
T Consensus 331 ~Gd~ia~VSR-GkaFi~~~~~~~~iq-v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~k-r~e~~lg~I~av 407 (668)
T COG4946 331 NGDYIALVSR-GKAFIMRPWDGYSIQ-VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVK-RIEKDLGNIEAV 407 (668)
T ss_pred CCcEEEEEec-CcEEEECCCCCeeEE-cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEE-EeeCCccceEEE
Confidence 6888888874 566666655333322 24666788888888888999999998 8899999888754 344456789999
Q ss_pred EEcCCCc-EEEEeCCCcEEEEeCCCCe
Q psy3840 86 DWQSNTS-FASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 86 ~~~~~~~-~~~~~~d~~i~i~d~~~~~ 111 (131)
..+++|+ ++.+....++.+.|+.++.
T Consensus 408 ~vs~dGK~~vvaNdr~el~vididngn 434 (668)
T COG4946 408 KVSPDGKKVVVANDRFELWVIDIDNGN 434 (668)
T ss_pred EEcCCCcEEEEEcCceEEEEEEecCCC
Confidence 9999998 6777777789999998874
No 311
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.94 E-value=0.0016 Score=41.79 Aligned_cols=115 Identities=13% Similarity=0.108 Sum_probs=74.2
Q ss_pred cccCCCCEEEEEeC-----CCeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEe------------------C
Q psy3840 3 SSRNNGSFLATGSY-----DGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAG------------------V 57 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-----d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~------------------~ 57 (131)
.|++||++|++.-+ .|.|-+||.. ...+.++..|.-.-..+.+.|+++.++.+. .
T Consensus 57 ~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM 136 (305)
T PF07433_consen 57 VFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTM 136 (305)
T ss_pred EEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhc
Confidence 58999999988633 4579999987 455566666655556777888886666541 2
Q ss_pred CCcEEEEECCCcceeeeee----------------------------------------------------------cCC
Q psy3840 58 DKTTIIWDAASGQCEQQFS----------------------------------------------------------FHS 79 (131)
Q Consensus 58 d~~i~~~d~~~~~~~~~~~----------------------------------------------------------~~~ 79 (131)
+.++.+.|..+|+.+.... .-.
T Consensus 137 ~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~ 216 (305)
T PF07433_consen 137 QPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLN 216 (305)
T ss_pred CCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhC
Confidence 3344445555554332210 002
Q ss_pred CCeEEEEEcCCCc-E-EEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 80 APALDVDWQSNTS-F-ASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 80 ~~v~~~~~~~~~~-~-~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
.-+-+|++++++. + +++-..+.+.+||..+++.+....
T Consensus 217 ~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~ 256 (305)
T PF07433_consen 217 GYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVP 256 (305)
T ss_pred CceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccc
Confidence 3466788888865 4 555566789999999888776553
No 312
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.91 E-value=0.00055 Score=49.17 Aligned_cols=99 Identities=10% Similarity=0.096 Sum_probs=70.1
Q ss_pred CCEEEEEeCCCeEEEEcCC--CCceeeccc----ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 8 GSFLATGSYDGYARIWTSD--GSLKSTLGQ----HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~--~~~~~~~~~----~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.+..+.|-.+..+.-||.. +..+..... ......|++-..+| +++.|+.+|.|++||-...+....+++-..+
T Consensus 542 ~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~p 620 (794)
T PF08553_consen 542 NEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDP 620 (794)
T ss_pred CCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCC
Confidence 3456677778889999976 322221112 23456777655444 6899999999999994333333456677889
Q ss_pred eEEEEEcCCCcEEEEeCCCcEEEEeC
Q psy3840 82 ALDVDWQSNTSFASCSTDQHIHVCKL 107 (131)
Q Consensus 82 v~~~~~~~~~~~~~~~~d~~i~i~d~ 107 (131)
|..+..+.||+.+.+..+..+.+++.
T Consensus 621 I~~iDvt~DGkwilaTc~tyLlLi~t 646 (794)
T PF08553_consen 621 IIGIDVTADGKWILATCKTYLLLIDT 646 (794)
T ss_pred eeEEEecCCCcEEEEeecceEEEEEE
Confidence 99999999999777777888888885
No 313
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.90 E-value=0.0015 Score=40.20 Aligned_cols=106 Identities=16% Similarity=0.095 Sum_probs=67.4
Q ss_pred CCCEEEEEeCCCeEEEEcCC-CCceeeccccccc----------EEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeee
Q psy3840 7 NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGP----------IFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 75 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~----------i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 75 (131)
+++.++++..++.|..+|.. |+.+......... +..-....++ .++.++.++.+..+|+.+++.+...
T Consensus 121 ~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~ 199 (238)
T PF13360_consen 121 DGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSK 199 (238)
T ss_dssp ETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEE
T ss_pred ecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEe
Confidence 36788888889999999977 7776655443311 1122222244 6677777775443499999866433
Q ss_pred ecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEE
Q psy3840 76 SFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKS 115 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~ 115 (131)
. ...........++.++.++.++.+..||+++++.+.+
T Consensus 200 ~--~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 200 P--ISGIYSLPSVDGGTLYVTSSDGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp C--SS-ECECEECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred c--CCCccCCceeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence 3 2233332233345577777899999999999988754
No 314
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.0021 Score=41.65 Aligned_cols=106 Identities=8% Similarity=0.099 Sum_probs=71.3
Q ss_pred cccCCCCEEEEEeC-CCeEEEEcCCC--Cceeeccc---------ccccEEEEEEcCCCCEEEEEeC-CCcEEEEECCC-
Q psy3840 3 SSRNNGSFLATGSY-DGYARIWTSDG--SLKSTLGQ---------HKGPIFALKWNKRGNYILSAGV-DKTTIIWDAAS- 68 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~i~~~~~~~--~~~~~~~~---------~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~~~- 68 (131)
.|+|++++....+. +++|.+|..+. .....++. .......+..+|+|+++.++.. ...|.+|.+..
T Consensus 197 ~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~ 276 (346)
T COG2706 197 VFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPD 276 (346)
T ss_pred EEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 58999999988887 88999998762 23332222 2345677889999999988876 55788887654
Q ss_pred -cce--eeeeecCCCCeEEEEEcCCCc-EEEEeCC-CcEEEEeCC
Q psy3840 69 -GQC--EQQFSFHSAPALDVDWQSNTS-FASCSTD-QHIHVCKLH 108 (131)
Q Consensus 69 -~~~--~~~~~~~~~~v~~~~~~~~~~-~~~~~~d-~~i~i~d~~ 108 (131)
++. +.....+........+++.++ |+++..+ ..|.+|...
T Consensus 277 ~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d 321 (346)
T COG2706 277 GGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERD 321 (346)
T ss_pred CCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEc
Confidence 322 122233444467888999887 5555544 468888654
No 315
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.89 E-value=0.00011 Score=33.75 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=29.8
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcce
Q psy3840 37 KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQC 71 (131)
Q Consensus 37 ~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~ 71 (131)
...|.+++|+|...+++.+..+|.+.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 456899999999999999999999999998 5543
No 316
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.87 E-value=0.00065 Score=45.76 Aligned_cols=109 Identities=20% Similarity=0.246 Sum_probs=66.2
Q ss_pred ccccCCCCEEEEEeC-CCe--EEEEcCCCCceeecccccccEEEEEEcCCCCEEEEE-eCCCc--EEEEECCCcceeeee
Q psy3840 2 QSSRNNGSFLATGSY-DGY--ARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSA-GVDKT--TIIWDAASGQCEQQF 75 (131)
Q Consensus 2 ~~~~~~~~~l~~~~~-d~~--i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~-~~d~~--i~~~d~~~~~~~~~~ 75 (131)
..|+|||++|+.... ||. |.++|+.++....+....+.-..-.|+|+|++++-. +..|. |.+.+++.+.. ..+
T Consensus 243 P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~ri 321 (425)
T COG0823 243 PAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRL 321 (425)
T ss_pred ccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEe
Confidence 468999998877654 665 555677765555554444444466799999987754 44555 55556555543 333
Q ss_pred ecCCCCeEEEEEcCCCc-EEEEeC-CCc--EEEEeCCCCe
Q psy3840 76 SFHSAPALDVDWQSNTS-FASCST-DQH--IHVCKLHSDK 111 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~~~-~~~~~~-d~~--i~i~d~~~~~ 111 (131)
......-..-.|+|++. ++..+. ++. |.+.|+.++.
T Consensus 322 T~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 322 TFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred eccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence 33333333677899987 544442 344 6677766554
No 317
>KOG1912|consensus
Probab=97.86 E-value=0.00031 Score=49.80 Aligned_cols=100 Identities=13% Similarity=0.242 Sum_probs=75.9
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcC---CC-CEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNK---RG-NYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~---~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
.-+||++...|.|.+||.. +..+..+..|..++..++|-+ +. ..++.-....++.+|+..+|+.+..+.......
T Consensus 79 ~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iL 158 (1062)
T KOG1912|consen 79 QLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEIL 158 (1062)
T ss_pred ceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcce
Confidence 3467788889999999986 666677788888999999876 33 356666778899999999999988877665666
Q ss_pred EEEEEcC-CCc-EEEEeCCCcEEEEeC
Q psy3840 83 LDVDWQS-NTS-FASCSTDQHIHVCKL 107 (131)
Q Consensus 83 ~~~~~~~-~~~-~~~~~~d~~i~i~d~ 107 (131)
.++.+.| +.+ +..-+..|.+.+.+.
T Consensus 159 s~f~~DPfd~rh~~~l~s~g~vl~~~~ 185 (1062)
T KOG1912|consen 159 SCFRVDPFDSRHFCVLGSKGFVLSCKD 185 (1062)
T ss_pred eeeeeCCCCcceEEEEccCceEEEEec
Confidence 7788888 333 655566677766654
No 318
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.84 E-value=0.00013 Score=49.10 Aligned_cols=102 Identities=15% Similarity=0.281 Sum_probs=72.9
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCc---------------EEEEEC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKT---------------TIIWDA 66 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~---------------i~~~d~ 66 (131)
.+||.|.+|++.... -|.+|... ...+..+. | ..|..+.|+|.+++|.+-+..+. +.+||+
T Consensus 39 ~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~-~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~ 115 (561)
T COG5354 39 SESPLGTYLFSEHAA-GVECWGGPSKAKLVRFR-H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDI 115 (561)
T ss_pred eecCcchheehhhcc-ceEEccccchhheeeee-c-CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEec
Confidence 478999999987654 48888865 22222222 3 46889999999999998765444 899999
Q ss_pred CCcceeeeeecCCCC--eE-EEEEcCCCcEEEEeCCCcEEEEeC
Q psy3840 67 ASGQCEQQFSFHSAP--AL-DVDWQSNTSFASCSTDQHIHVCKL 107 (131)
Q Consensus 67 ~~~~~~~~~~~~~~~--v~-~~~~~~~~~~~~~~~d~~i~i~d~ 107 (131)
.++..+..+.....+ .+ -+.|+-+..+++---...++|+++
T Consensus 116 ~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~ 159 (561)
T COG5354 116 ASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEI 159 (561)
T ss_pred cCceeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEec
Confidence 999999888776555 44 677877765433334457888885
No 319
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.84 E-value=0.0014 Score=43.78 Aligned_cols=106 Identities=11% Similarity=0.006 Sum_probs=69.5
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC-eEEE
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP-ALDV 85 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-v~~~ 85 (131)
+..++.++.++.+..+|.. |+.+...... . ...+. ..+..++.++.++.+..+|..+++.+......... ..+.
T Consensus 256 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~-~-~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp 331 (394)
T PRK11138 256 GGVVYALAYNGNLVALDLRSGQIVWKREYG-S-VNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAP 331 (394)
T ss_pred CCEEEEEEcCCeEEEEECCCCCEEEeecCC-C-ccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCC
Confidence 4567777788899888876 6555443211 1 11111 24667777888999999999999876543321111 1111
Q ss_pred EEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEec
Q psy3840 86 DWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 86 ~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
.. .++.++.++.+|.++..|.++|+.+.+.+.
T Consensus 332 ~v-~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~ 363 (394)
T PRK11138 332 VL-YNGYLVVGDSEGYLHWINREDGRFVAQQKV 363 (394)
T ss_pred EE-ECCEEEEEeCCCEEEEEECCCCCEEEEEEc
Confidence 11 256788889999999999999998877654
No 320
>KOG0882|consensus
Probab=97.83 E-value=0.00023 Score=47.38 Aligned_cols=108 Identities=13% Similarity=0.248 Sum_probs=79.9
Q ss_pred EEEEEe-CCCeEEEEcCCCC--ce-eecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC------cceeee-----
Q psy3840 10 FLATGS-YDGYARIWTSDGS--LK-STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS------GQCEQQ----- 74 (131)
Q Consensus 10 ~l~~~~-~d~~i~~~~~~~~--~~-~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~------~~~~~~----- 74 (131)
.++++. .++.+.++|-.+. +. ..-.-|..+|.++.+.+-+..+++....|.|..|.... .+....
T Consensus 113 ~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eT 192 (558)
T KOG0882|consen 113 LIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHET 192 (558)
T ss_pred eEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccc
Confidence 444443 3788999996522 22 33345889999999999999999999999999999873 111111
Q ss_pred ----eecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 75 ----FSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 75 ----~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
+........++.++|++. +.+-+.|..|++++.++++.++.+.
T Consensus 193 dLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiD 240 (558)
T KOG0882|consen 193 DLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEID 240 (558)
T ss_pred hhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhh
Confidence 222345678899999976 8888899999999999998777664
No 321
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.83 E-value=0.00021 Score=45.68 Aligned_cols=106 Identities=20% Similarity=0.316 Sum_probs=70.3
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC------CCceeeccccc------------ccEEEEEEcCCC--CEEEEEeCCCcEEE
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD------GSLKSTLGQHK------------GPIFALKWNKRG--NYILSAGVDKTTII 63 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~------~~~~~~~~~~~------------~~i~~~~~~~~~--~~~~s~~~d~~i~~ 63 (131)
|...|.++++|...|.|-+|.-+ .+....+++|. .+|..+.|..++ ..++..+.|.+|++
T Consensus 34 fd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlstNdktiKl 113 (460)
T COG5170 34 FDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLSTNDKTIKL 113 (460)
T ss_pred eccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEecCCceeee
Confidence 55678999999999999998644 22233445543 456777776533 45777778999999
Q ss_pred EECCCcce--e----------------------------------------eee-ecCCCCeEEEEEcCCCcEEEEeCCC
Q psy3840 64 WDAASGQC--E----------------------------------------QQF-SFHSAPALDVDWQSNTSFASCSTDQ 100 (131)
Q Consensus 64 ~d~~~~~~--~----------------------------------------~~~-~~~~~~v~~~~~~~~~~~~~~~~d~ 100 (131)
|.+.+... + +.+ ..|...+.++.+..+...+....|-
T Consensus 114 WKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~et~lSaDdL 193 (460)
T COG5170 114 WKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKETLLSADDL 193 (460)
T ss_pred eeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchheeeeccce
Confidence 98764310 0 000 1234457788888887655566778
Q ss_pred cEEEEeCCC
Q psy3840 101 HIHVCKLHS 109 (131)
Q Consensus 101 ~i~i~d~~~ 109 (131)
.|.+|++.-
T Consensus 194 rINLWnl~i 202 (460)
T COG5170 194 RINLWNLEI 202 (460)
T ss_pred eeeeccccc
Confidence 899998864
No 322
>KOG4649|consensus
Probab=97.82 E-value=0.0024 Score=40.10 Aligned_cols=108 Identities=11% Similarity=0.018 Sum_probs=74.7
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEE
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 86 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 86 (131)
..+++.|+..+.+..-|.. |+...+.. -...+.+-+.- -+..++.|...|.+++.+..+|.....+.....-=....
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~ 100 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQ 100 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceE
Confidence 4677788888888888876 55544322 22334332222 477799999999999999999987777664322112233
Q ss_pred EcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 87 WQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 87 ~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
..+++. +..+++|+..+..|.++..++.+.+
T Consensus 101 ~d~~~glIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 101 CDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred EcCCCceEEEecCCCcEEEecccccceEEecc
Confidence 455655 8899999999999999988887654
No 323
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.81 E-value=0.00085 Score=44.73 Aligned_cols=110 Identities=10% Similarity=0.007 Sum_probs=72.1
Q ss_pred CCCEEEEEeCCCeEEEEcCC-CCceeecccccc--cEE-----EEEEcC--CCCEEEEEeCCCcEEEEECCCcceeeeee
Q psy3840 7 NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKG--PIF-----ALKWNK--RGNYILSAGVDKTTIIWDAASGQCEQQFS 76 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~--~i~-----~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 76 (131)
.+..+++++.++.+.-+|.. |+.+........ ... .+.-.| .+..++.++.++.++.+|.++|+.+....
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~ 147 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTK 147 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCccccc
Confidence 45677888888899989976 776665432210 000 000112 35567778889999999999999887765
Q ss_pred cCCCCeEE-EEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEec
Q psy3840 77 FHSAPALD-VDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 77 ~~~~~v~~-~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
... .+.+ ... .++.++.+..++.++-+|.++|+.+..+..
T Consensus 148 ~~~-~~~ssP~v-~~~~v~v~~~~g~l~ald~~tG~~~W~~~~ 188 (394)
T PRK11138 148 VAG-EALSRPVV-SDGLVLVHTSNGMLQALNESDGAVKWTVNL 188 (394)
T ss_pred CCC-ceecCCEE-ECCEEEEECCCCEEEEEEccCCCEeeeecC
Confidence 432 2211 111 156677778889999999999998877653
No 324
>KOG1275|consensus
Probab=97.81 E-value=0.00019 Score=51.56 Aligned_cols=106 Identities=16% Similarity=0.186 Sum_probs=74.9
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCceeeccc-ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEE
Q psy3840 7 NGSFLATGSYDGYARIWTSDGSLKSTLGQ-HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDV 85 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~ 85 (131)
++..++.|+-...+..+|+.+........ ..+.+.-| ..+++.+.+|...|+|.+-|+++.+.+.++..|.+.+.++
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~im--R~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf 223 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIM--RYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF 223 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEE--EecCcEEEeecccceEEeecCCcCceeeeeeccccceeee
Confidence 45667777666667777877444333222 22234444 4478899999999999999999999999999999999887
Q ss_pred EEcCCCcEEEEeC---------CCcEEEEeCCCCeeeEE
Q psy3840 86 DWQSNTSFASCST---------DQHIHVCKLHSDKPVKS 115 (131)
Q Consensus 86 ~~~~~~~~~~~~~---------d~~i~i~d~~~~~~~~~ 115 (131)
....+ .|++++. |.-|+|||+|+.+.+.-
T Consensus 224 Dv~GN-lLitCG~S~R~~~l~~D~FvkVYDLRmmral~P 261 (1118)
T KOG1275|consen 224 DVQGN-LLITCGYSMRRYNLAMDPFVKVYDLRMMRALSP 261 (1118)
T ss_pred eccCC-eEEEeecccccccccccchhhhhhhhhhhccCC
Confidence 66432 3666653 55688999998665543
No 325
>KOG2114|consensus
Probab=97.77 E-value=0.00037 Score=49.71 Aligned_cols=106 Identities=20% Similarity=0.271 Sum_probs=72.9
Q ss_pred CccccCCCCEEEEEeCCCeEEEEcCCCCceeeccccccc-EEEEEEcCCCCEEEEEeCCC-----cEEEEECCCc-----
Q psy3840 1 MQSSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGP-IFALKWNKRGNYILSAGVDK-----TTIIWDAASG----- 69 (131)
Q Consensus 1 ~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~s~~~d~-----~i~~~d~~~~----- 69 (131)
++.+++.+..++.|+.+|.|.+.+-..+....++.+... +..+-...+...+++.+.|+ .+++|+++.-
T Consensus 28 isc~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s 107 (933)
T KOG2114|consen 28 ISCCSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS 107 (933)
T ss_pred eeEEcCCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence 356889999999999999999998766666667776665 44444444556777766544 4889998642
Q ss_pred -cee---eeee----cCCCCeEEEEEcCCCc-EEEEeCCCcEEEEe
Q psy3840 70 -QCE---QQFS----FHSAPALDVDWQSNTS-FASCSTDQHIHVCK 106 (131)
Q Consensus 70 -~~~---~~~~----~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d 106 (131)
.++ +.+. ....++.+++.+.+-+ ++.|-.+|.|..+.
T Consensus 108 P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~ 153 (933)
T KOG2114|consen 108 PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYK 153 (933)
T ss_pred cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEc
Confidence 122 1111 1245678888888754 78888889888774
No 326
>KOG4649|consensus
Probab=97.77 E-value=0.0019 Score=40.53 Aligned_cols=95 Identities=15% Similarity=0.128 Sum_probs=65.1
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEE
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 86 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 86 (131)
|++++.|+..|.+++.+.+ |.....+...+..-......+++..+..++.|+..+..|.++..++...+.......+-+
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~ 142 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPV 142 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccce
Confidence 6788999999999988877 656666554433222335578999999999999999999999888877664433333444
Q ss_pred EcC-CCcEEEEeCCCcE
Q psy3840 87 WQS-NTSFASCSTDQHI 102 (131)
Q Consensus 87 ~~~-~~~~~~~~~d~~i 102 (131)
..| ++.+..+...|.+
T Consensus 143 i~~g~~sly~a~t~G~v 159 (354)
T KOG4649|consen 143 IAPGDGSLYAAITAGAV 159 (354)
T ss_pred ecCCCceEEEEeccceE
Confidence 455 3445444444443
No 327
>KOG1645|consensus
Probab=97.75 E-value=0.00029 Score=46.26 Aligned_cols=67 Identities=13% Similarity=0.182 Sum_probs=52.5
Q ss_pred cccCCCC-EEEEEeCCCeEEEEcCCCC-ceeecccccccEEEEEEcCC-CCEEEEEeCCCcEEEEECCCcc
Q psy3840 3 SSRNNGS-FLATGSYDGYARIWTSDGS-LKSTLGQHKGPIFALKWNKR-GNYILSAGVDKTTIIWDAASGQ 70 (131)
Q Consensus 3 ~~~~~~~-~l~~~~~d~~i~~~~~~~~-~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~ 70 (131)
+|+|..+ ++..++.+..|++.|++.. .+..+..+ ..+++++|+.+ .+.+..|...|.|.+||++..+
T Consensus 200 afSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 200 AFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred ccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 5788777 6778888999999999844 44445555 78999999985 5577788889999999998643
No 328
>KOG2314|consensus
Probab=97.65 E-value=0.00033 Score=47.86 Aligned_cols=77 Identities=17% Similarity=0.327 Sum_probs=58.6
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEEEeC-----------CCcEEEEe
Q psy3840 39 PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCST-----------DQHIHVCK 106 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~-----------d~~i~i~d 106 (131)
.-+-+.|||.|.++++-...| |.+|--.+-..++.+. +..+.-+.|+|..+ |++-+. ...+.|||
T Consensus 212 Tetyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~--Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWD 288 (698)
T KOG2314|consen 212 TETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY--HPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWD 288 (698)
T ss_pred eeeeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc--CCCceeeecCCccceEEEecCCccccCcccCCCceEEEEE
Confidence 346789999999999987776 7789887766666665 24678889999866 666432 24799999
Q ss_pred CCCCeeeEEEec
Q psy3840 107 LHSDKPVKSFEG 118 (131)
Q Consensus 107 ~~~~~~~~~~~~ 118 (131)
+++|...+.+..
T Consensus 289 I~tG~lkrsF~~ 300 (698)
T KOG2314|consen 289 IATGLLKRSFPV 300 (698)
T ss_pred ccccchhcceec
Confidence 999988777654
No 329
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.64 E-value=0.0034 Score=46.39 Aligned_cols=104 Identities=14% Similarity=0.305 Sum_probs=69.1
Q ss_pred cccCCCCEEEEEeC---CCeEEEEcCCCCc----eeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc--eee
Q psy3840 3 SSRNNGSFLATGSY---DGYARIWTSDGSL----KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ--CEQ 73 (131)
Q Consensus 3 ~~~~~~~~l~~~~~---d~~i~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~--~~~ 73 (131)
+|.|+|++||+... ...|.+|.-+|-. ...+......+..+.|++++..++..-.|. |.+|...+-. ..+
T Consensus 263 ~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKq 341 (928)
T PF04762_consen 263 SWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQ 341 (928)
T ss_pred cCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEE
Confidence 68999999999865 3457778766432 222234556899999999999999977655 9999987632 222
Q ss_pred eeec-CCCCeEEEEEcCCC--cEEEEeCCCcEEEEeC
Q psy3840 74 QFSF-HSAPALDVDWQSNT--SFASCSTDQHIHVCKL 107 (131)
Q Consensus 74 ~~~~-~~~~v~~~~~~~~~--~~~~~~~d~~i~i~d~ 107 (131)
.+.. ....+..+.|+|+. ++.....++.+..++.
T Consensus 342 ei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~ 378 (928)
T PF04762_consen 342 EIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDF 378 (928)
T ss_pred EEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEE
Confidence 2322 22344559999973 3666666666655543
No 330
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.63 E-value=0.0018 Score=43.89 Aligned_cols=102 Identities=18% Similarity=0.212 Sum_probs=70.9
Q ss_pred cccCCCCEEEEEe--CCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC---CCcEEEEECCCcceee-eee
Q psy3840 3 SSRNNGSFLATGS--YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV---DKTTIIWDAASGQCEQ-QFS 76 (131)
Q Consensus 3 ~~~~~~~~l~~~~--~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~---d~~i~~~d~~~~~~~~-~~~ 76 (131)
.|.|.++.+++.+ ..-.+.++|+.+.....+. +.+-..+.|+|.+++++.++- .|.+-+||......+. .+.
T Consensus 281 ~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl~~~~P--e~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~ 358 (561)
T COG5354 281 TWEPLSSRFAVISGYMPASVSVFDLRGNLRFYFP--EQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFN 358 (561)
T ss_pred eecccCCceeEEecccccceeecccccceEEecC--CcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEee
Confidence 4778888777655 4667889999887544333 334466789999999998765 4779999987765544 444
Q ss_pred cCCCCeEEEEEcCCCc-EEEEe------CCCcEEEEeCC
Q psy3840 77 FHSAPALDVDWQSNTS-FASCS------TDQHIHVCKLH 108 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~-~~~~~------~d~~i~i~d~~ 108 (131)
+ ....-+.|+|+++ +.+.. .|..+.+||+.
T Consensus 359 ~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~ 395 (561)
T COG5354 359 G--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVY 395 (561)
T ss_pred c--CCceEeeccCCceEEEecCCCcccccCcceEEEEec
Confidence 3 2345567999988 33332 36789999985
No 331
>KOG1920|consensus
Probab=97.60 E-value=0.0023 Score=47.55 Aligned_cols=108 Identities=19% Similarity=0.386 Sum_probs=70.9
Q ss_pred cccCCCCEEEE-----EeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEe---CCCcEEEEECC---Ccce
Q psy3840 3 SSRNNGSFLAT-----GSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG---VDKTTIIWDAA---SGQC 71 (131)
Q Consensus 3 ~~~~~~~~l~~-----~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~---~d~~i~~~d~~---~~~~ 71 (131)
+|.-||+++++ ......+++||-+|..-..-....+--.+++|-|.|.++++-. .|+.|.+|.-+ .+..
T Consensus 202 sWRgDg~~fAVs~~~~~~~~RkirV~drEg~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f 281 (1265)
T KOG1920|consen 202 SWRGDGEYFAVSFVESETGTRKIRVYDREGALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEF 281 (1265)
T ss_pred EEccCCcEEEEEEEeccCCceeEEEecccchhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCcccccc
Confidence 36678899988 3333689999987544443334444456889999999988753 35578888733 2333
Q ss_pred eeeeecCCCCeEEEEEcCCCc-EEE---EeCCCcEEEEeCCCC
Q psy3840 72 EQQFSFHSAPALDVDWQSNTS-FAS---CSTDQHIHVCKLHSD 110 (131)
Q Consensus 72 ~~~~~~~~~~v~~~~~~~~~~-~~~---~~~d~~i~i~d~~~~ 110 (131)
...++....++..++|+.++. |+. ......|++|-+.+.
T Consensus 282 ~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 282 VLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred ccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCe
Confidence 333444445589999998876 444 344455999987664
No 332
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.50 E-value=0.01 Score=41.84 Aligned_cols=52 Identities=8% Similarity=0.060 Sum_probs=36.9
Q ss_pred CcEEEEECCC-----cceeeeeecCCCCeEEEEEcCCCc--EEEEeCCCcEEEEeCCCCe
Q psy3840 59 KTTIIWDAAS-----GQCEQQFSFHSAPALDVDWQSNTS--FASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 59 ~~i~~~d~~~-----~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~d~~i~i~d~~~~~ 111 (131)
+.+.+.|.++ .+.+..+.. ......+.++||++ ++++..+..+.|.|+.+.+
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIPV-GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k 354 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVPV-PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLD 354 (635)
T ss_pred CEEEEEECCccccCCcceEEEEEC-CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhh
Confidence 4577777776 334444443 45678899999988 4666678999999998754
No 333
>KOG1008|consensus
Probab=97.50 E-value=2.7e-05 Score=53.69 Aligned_cols=104 Identities=24% Similarity=0.302 Sum_probs=73.9
Q ss_pred cCCCCEEEEEeCCCeEEEEcCC---CCceeecccccccEEEEEEcC-CCCEEEEEe----CCCcEEEEECCCc--cee--
Q psy3840 5 RNNGSFLATGSYDGYARIWTSD---GSLKSTLGQHKGPIFALKWNK-RGNYILSAG----VDKTTIIWDAASG--QCE-- 72 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~---~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~----~d~~i~~~d~~~~--~~~-- 72 (131)
..+..++++|..+|.|-+-... ........++..++++++|++ |.+.++.|- .|..+.+||+.++ .+.
T Consensus 67 ~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~ 146 (783)
T KOG1008|consen 67 GNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKES 146 (783)
T ss_pred CCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccc
Confidence 3445788999999999988765 222344566788999999999 667777663 3678999999876 221
Q ss_pred eeeec-CCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCC
Q psy3840 73 QQFSF-HSAPALDVDWQSNTS-FASCSTDQHIHVCKLH 108 (131)
Q Consensus 73 ~~~~~-~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~ 108 (131)
..+.. ......+++|..+.+ +++|...+.++++|+|
T Consensus 147 ~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlR 184 (783)
T KOG1008|consen 147 PLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLR 184 (783)
T ss_pred cccccccccCccccccccCcchhhcccccchhhhhhhh
Confidence 22222 233456788887766 6778888899999998
No 334
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.48 E-value=0.002 Score=42.45 Aligned_cols=100 Identities=19% Similarity=0.267 Sum_probs=60.6
Q ss_pred cCCCCEEEEEe---------CCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeee
Q psy3840 5 RNNGSFLATGS---------YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 75 (131)
Q Consensus 5 ~~~~~~l~~~~---------~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 75 (131)
|||+++++... ..+.+.+||+..+....+......+....|+|+|+.++-.. ++.+.+.+..++...+.-
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT 79 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLT 79 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEec
Confidence 57888888742 23457788888666555555567889999999999988774 567999988766433211
Q ss_pred -ec-------C---------CCCeEEEEEcCCCc-EEEEe-CCCcEEEE
Q psy3840 76 -SF-------H---------SAPALDVDWQSNTS-FASCS-TDQHIHVC 105 (131)
Q Consensus 76 -~~-------~---------~~~v~~~~~~~~~~-~~~~~-~d~~i~i~ 105 (131)
.+ - -..-..+.|+|+++ |+... .+..+..+
T Consensus 80 ~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~ 128 (353)
T PF00930_consen 80 TDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEY 128 (353)
T ss_dssp S--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EE
T ss_pred cccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceE
Confidence 11 0 12346788999987 54443 33344433
No 335
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.40 E-value=0.0093 Score=40.17 Aligned_cols=83 Identities=10% Similarity=0.073 Sum_probs=60.2
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEE-EEE-cC---------------C-Cc-E-EE
Q psy3840 36 HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALD-VDW-QS---------------N-TS-F-AS 95 (131)
Q Consensus 36 ~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~-~~~-~~---------------~-~~-~-~~ 95 (131)
....+.++..+|.+++.++.+.=|.|.++|+.++..++.+++.++.-.. +.. .+ . .. | +-
T Consensus 306 ~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIy 385 (415)
T PF14655_consen 306 SKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIY 385 (415)
T ss_pred CCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEE
Confidence 3446788999999999999888899999999999888887765443111 110 01 0 11 2 34
Q ss_pred EeCCCcEEEEeCCCCeeeEEEec
Q psy3840 96 CSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 96 ~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
+...|.|-||+++.|..+..+..
T Consensus 386 aprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 386 APRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred eccCCeEEEEecCCCCEEEEEEe
Confidence 56678999999999999888764
No 336
>KOG1008|consensus
Probab=97.39 E-value=7.9e-05 Score=51.51 Aligned_cols=104 Identities=16% Similarity=0.162 Sum_probs=70.4
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcC-CCCEEEEEeCCCcEEEEE-CCCcc-eeeeeecCC-
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWD-AASGQ-CEQQFSFHS- 79 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d-~~~~~-~~~~~~~~~- 79 (131)
|-.+.+.+.+|.....++++|+...........+..+..+..+| .+.++++-. |+.+.+|| .++-+ ++..+....
T Consensus 162 wlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N 240 (783)
T KOG1008|consen 162 WLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNEN 240 (783)
T ss_pred cccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCC
Confidence 44567788888888889999887444333333444667778889 788877765 99999999 44432 223332222
Q ss_pred ---CCeEEEEEcCC--CcEEEEeCC-CcEEEEeCC
Q psy3840 80 ---APALDVDWQSN--TSFASCSTD-QHIHVCKLH 108 (131)
Q Consensus 80 ---~~v~~~~~~~~--~~~~~~~~d-~~i~i~d~~ 108 (131)
..+..++|+|. |.+++...| ++|+.+|+.
T Consensus 241 ~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 241 KKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred CcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 35889999996 556666655 579999875
No 337
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.38 E-value=0.0011 Score=30.35 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=28.0
Q ss_pred CCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeee
Q psy3840 79 SAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~ 113 (131)
..+|..+.|+|... ++.+..+|.|.++.+ +++.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qri 45 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRI 45 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence 35688999999965 899999999999998 45543
No 338
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.37 E-value=0.0053 Score=41.73 Aligned_cols=108 Identities=14% Similarity=0.162 Sum_probs=55.8
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
+++|+|+.++++ .+|...+|....-... ..+......|.+ ...+++-...++|.++.--+.+....+... ..+
T Consensus 39 s~npngr~v~V~-g~geY~iyt~~~~r~k----~~G~g~~~vw~~-~n~yAv~~~~~~I~I~kn~~~~~~k~i~~~-~~~ 111 (443)
T PF04053_consen 39 SHNPNGRFVLVC-GDGEYEIYTALAWRNK----AFGSGLSFVWSS-RNRYAVLESSSTIKIYKNFKNEVVKSIKLP-FSV 111 (443)
T ss_dssp EE-TTSSEEEEE-ETTEEEEEETTTTEEE----EEEE-SEEEE-T-SSEEEEE-TTS-EEEEETTEE-TT-----S-S-E
T ss_pred EECCCCCEEEEE-cCCEEEEEEccCCccc----ccCceeEEEEec-CccEEEEECCCeEEEEEcCccccceEEcCC-ccc
Confidence 478999999995 5788888874322211 123445667887 444666666888888632233322233321 233
Q ss_pred EEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEeccc
Q psy3840 83 LDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120 (131)
Q Consensus 83 ~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~ 120 (131)
..+.. |.++....++.|.+||+.+++.++.+....
T Consensus 112 ~~If~---G~LL~~~~~~~i~~yDw~~~~~i~~i~v~~ 146 (443)
T PF04053_consen 112 EKIFG---GNLLGVKSSDFICFYDWETGKLIRRIDVSA 146 (443)
T ss_dssp EEEE----SSSEEEEETTEEEEE-TTT--EEEEESS-E
T ss_pred ceEEc---CcEEEEECCCCEEEEEhhHcceeeEEecCC
Confidence 33433 664444445579999999998888887543
No 339
>KOG2041|consensus
Probab=97.36 E-value=0.0013 Score=46.69 Aligned_cols=75 Identities=23% Similarity=0.385 Sum_probs=60.3
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc---------------eeeeeecCCCCeEEEEEcCCCc-EEEEeCC
Q psy3840 36 HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ---------------CEQQFSFHSAPALDVDWQSNTS-FASCSTD 99 (131)
Q Consensus 36 ~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d 99 (131)
......|+.|+.+..+++.|+.||.+++..+.+.. .-+++.+|...|..+.|+.+.+ +.+.+.+
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~ 92 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS 92 (1189)
T ss_pred CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence 34567899999999999999999999998775421 1134568899999999988765 8889999
Q ss_pred CcEEEEeCCCC
Q psy3840 100 QHIHVCKLHSD 110 (131)
Q Consensus 100 ~~i~i~d~~~~ 110 (131)
|-|.+|-+-.+
T Consensus 93 GlIiVWmlykg 103 (1189)
T KOG2041|consen 93 GLIIVWMLYKG 103 (1189)
T ss_pred ceEEEEeeecc
Confidence 99999977544
No 340
>KOG2114|consensus
Probab=97.36 E-value=0.03 Score=40.68 Aligned_cols=118 Identities=14% Similarity=0.224 Sum_probs=76.9
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-----CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc-eeeeeec
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-----GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ-CEQQFSF 77 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~-~~~~~~~ 77 (131)
.+.+-..+++|-.+|.|..+.-. +....-.....++|+.+++..++..++-...-..|.+|.+.... ....+..
T Consensus 133 Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~ 212 (933)
T KOG2114|consen 133 VSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDN 212 (933)
T ss_pred EEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeecc
Confidence 34556788999899999988533 33223333345799999998888773333344568888887433 2444666
Q ss_pred CCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEe-cccce
Q psy3840 78 HSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFE-GHTRV 122 (131)
Q Consensus 78 ~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~ 122 (131)
++.+..|-.+++... ++++ .+..+.+|+.....+--.+. +|...
T Consensus 213 ~G~~lnCss~~~~t~qfIca-~~e~l~fY~sd~~~~cfaf~~g~kk~ 258 (933)
T KOG2114|consen 213 NGISLNCSSFSDGTYQFICA-GSEFLYFYDSDGRGPCFAFEVGEKKE 258 (933)
T ss_pred CCccceeeecCCCCccEEEe-cCceEEEEcCCCcceeeeecCCCeEE
Confidence 777888888877654 5554 44578999887555545554 55443
No 341
>KOG2079|consensus
Probab=97.28 E-value=0.00098 Score=48.87 Aligned_cols=80 Identities=16% Similarity=0.133 Sum_probs=59.8
Q ss_pred CCCEEEEEeCCCcEEEEECCCccee-eeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 48 RGNYILSAGVDKTTIIWDAASGQCE-QQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 48 ~~~~~~s~~~d~~i~~~d~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
.+..++.|+..|.+...|.+..-.. ..-..-.++|.+++|+.+|+ ++.|-.+|.|.+||...++.++.+..|..+...
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 4556788888888988887654221 11112346899999999988 667778899999999999999998877776655
Q ss_pred Ee
Q psy3840 126 AM 127 (131)
Q Consensus 126 ~~ 127 (131)
++
T Consensus 178 vi 179 (1206)
T KOG2079|consen 178 VI 179 (1206)
T ss_pred EE
Confidence 54
No 342
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.28 E-value=0.011 Score=41.79 Aligned_cols=102 Identities=17% Similarity=0.173 Sum_probs=58.7
Q ss_pred cccCCCCEEEEEeCC-CeEEEE-----------cCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEE---EECC
Q psy3840 3 SSRNNGSFLATGSYD-GYARIW-----------TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTII---WDAA 67 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d-~~i~~~-----------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~---~d~~ 67 (131)
.|+|+|..+++..+. ..+++. ++.+..... ...+.|..+.|+|||..++... ++.+++ -...
T Consensus 403 sWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~ 479 (591)
T PRK13616 403 SWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTE 479 (591)
T ss_pred eECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCC
Confidence 588998888777533 122232 222211111 2345799999999999887665 467776 3433
Q ss_pred Ccce-e---eeeec-CCCCeEEEEEcCCCcEEEEeCCCcEEEEeC
Q psy3840 68 SGQC-E---QQFSF-HSAPALDVDWQSNTSFASCSTDQHIHVCKL 107 (131)
Q Consensus 68 ~~~~-~---~~~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~ 107 (131)
.|+. + ..+.. ....+.++.|.+++.|+.+..++...+|.+
T Consensus 480 ~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~v~~v 524 (591)
T PRK13616 480 DGQYALTNPREVGPGLGDTAVSLDWRTGDSLVVGRSDPEHPVWYV 524 (591)
T ss_pred CCceeecccEEeecccCCccccceEecCCEEEEEecCCCCceEEE
Confidence 4431 1 11222 223357899999988666655554445543
No 343
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.26 E-value=0.017 Score=35.96 Aligned_cols=101 Identities=10% Similarity=0.040 Sum_probs=60.5
Q ss_pred ccC-CCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEc-CCCCEEEEEeCCCcEEEEECCCcceeeeeec----
Q psy3840 4 SRN-NGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWN-KRGNYILSAGVDKTTIIWDAASGQCEQQFSF---- 77 (131)
Q Consensus 4 ~~~-~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~---- 77 (131)
|.+ ++.++++-...+.|..|+..+.......... ...+++. +++ .++.+...+ +.++|+.+++.......
T Consensus 7 ~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~g-~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~ 82 (246)
T PF08450_consen 7 WDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPG--PNGMAFDRPDG-RLYVADSGG-IAVVDPDTGKVTVLADLPDGG 82 (246)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEEEESSS--EEEEEEECTTS-EEEEEETTC-EEEEETTTTEEEEEEEEETTC
T ss_pred EECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCC--CceEEEEccCC-EEEEEEcCc-eEEEecCCCcEEEEeeccCCC
Confidence 555 6667777667889999998765554433222 5667777 564 445555544 45559888754333322
Q ss_pred -CCCCeEEEEEcCCCcE-EEEeCC--------CcEEEEeCC
Q psy3840 78 -HSAPALDVDWQSNTSF-ASCSTD--------QHIHVCKLH 108 (131)
Q Consensus 78 -~~~~v~~~~~~~~~~~-~~~~~d--------~~i~i~d~~ 108 (131)
.....+.+++.|+|.+ ++.... +.++.++..
T Consensus 83 ~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~ 123 (246)
T PF08450_consen 83 VPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD 123 (246)
T ss_dssp SCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT
T ss_pred cccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC
Confidence 2345788999999884 443322 456667766
No 344
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.23 E-value=0.014 Score=36.72 Aligned_cols=102 Identities=10% Similarity=0.107 Sum_probs=57.0
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCC----Cce--ee------cccccccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCc
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDG----SLK--ST------LGQHKGPIFALKWNK-RGNYILSAGVDKTTIIWDAASG 69 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~----~~~--~~------~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~ 69 (131)
+|++.++.|+++-......+|.+.+ ... .. .......+..+.++| .+++++....+..+..+| .+|
T Consensus 124 a~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G 202 (248)
T PF06977_consen 124 AYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQG 202 (248)
T ss_dssp EEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT-
T ss_pred EEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCC
Confidence 4677777887777666666665542 111 00 111334578899999 566777777788888899 667
Q ss_pred ceeeeeecCC---------CCeEEEEEcCCCcEEEEeCCCcEEEE
Q psy3840 70 QCEQQFSFHS---------APALDVDWQSNTSFASCSTDQHIHVC 105 (131)
Q Consensus 70 ~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~~d~~i~i~ 105 (131)
+.+..+.-.. .+...|++.++|.+...+.-+..++|
T Consensus 203 ~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f 247 (248)
T PF06977_consen 203 RVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF 247 (248)
T ss_dssp -EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred CEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence 6655543221 35778999999887666666655554
No 345
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.23 E-value=0.0097 Score=32.47 Aligned_cols=64 Identities=14% Similarity=0.119 Sum_probs=46.5
Q ss_pred EEEEEEcC---CC-CEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCcEEEEeCCCcEEEEe
Q psy3840 40 IFALKWNK---RG-NYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCK 106 (131)
Q Consensus 40 i~~~~~~~---~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d 106 (131)
|++|++.. +| +.++.|+.|..|++|+-. +.+..+.. ...+..+.-...++++.+-.+|+|-+|+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e-~~~v~~L~~~~~~~F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITE-TDKVTSLCSLGGGRFAYALANGTVGVYD 69 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEec-ccceEEEEEcCCCEEEEEecCCEEEEEe
Confidence 45666544 32 579999999999998743 45555554 4678888877777888888888877665
No 346
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.23 E-value=0.025 Score=37.05 Aligned_cols=115 Identities=14% Similarity=0.153 Sum_probs=67.2
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCceeeccc-------------ccccEEEEEEcCCCCEEEEE-e-------CCC--cEEE
Q psy3840 7 NGSFLATGSYDGYARIWTSDGSLKSTLGQ-------------HKGPIFALKWNKRGNYILSA-G-------VDK--TTII 63 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~~s~-~-------~d~--~i~~ 63 (131)
.+..++--+.+|.|+--++.+........ -.+.-.-+++++..+.++.. . +++ .|-+
T Consensus 194 ~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv 273 (342)
T PF06433_consen 194 DGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWV 273 (342)
T ss_dssp TTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEE
T ss_pred CCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEE
Confidence 34445445678888877776433221111 11223456777744433332 1 222 3667
Q ss_pred EECCCcceeeeeecCCCCeEEEEEcCCCc--EEE-EeCCCcEEEEeCCCCeeeEEEecccce
Q psy3840 64 WDAASGQCEQQFSFHSAPALDVDWQSNTS--FAS-CSTDQHIHVCKLHSDKPVKSFEGHTRV 122 (131)
Q Consensus 64 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~ 122 (131)
+|+.+++.+..+... .++.++..+.+.+ |++ ...++.+.+||..+|+.++++..-...
T Consensus 274 ~D~~t~krv~Ri~l~-~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG~~ 334 (342)
T PF06433_consen 274 YDLKTHKRVARIPLE-HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLGET 334 (342)
T ss_dssp EETTTTEEEEEEEEE-EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---SSS
T ss_pred EECCCCeEEEEEeCC-CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccCCC
Confidence 788999999888743 4677899888765 443 345789999999999999998754433
No 347
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.21 E-value=0.0061 Score=41.26 Aligned_cols=108 Identities=12% Similarity=0.117 Sum_probs=62.3
Q ss_pred cccCCCCEEEEEeC---C-CeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEE-EeCCCc--EEEEECCCcceeeee
Q psy3840 3 SSRNNGSFLATGSY---D-GYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILS-AGVDKT--TIIWDAASGQCEQQF 75 (131)
Q Consensus 3 ~~~~~~~~l~~~~~---d-~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s-~~~d~~--i~~~d~~~~~~~~~~ 75 (131)
.|+|++..++.-.- . ..+.+++++.......-...+.-..-+|+|+|+.++- ...|+. |++.|+..+...+ +
T Consensus 199 ~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-L 277 (425)
T COG0823 199 AWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-L 277 (425)
T ss_pred ccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-c
Confidence 57788877655422 2 3477788773222222223333445689999987664 445665 6667877766433 4
Q ss_pred ecCCCCeEEEEEcCCCc-E-EEEeCCCc--EEEEeCCCCe
Q psy3840 76 SFHSAPALDVDWQSNTS-F-ASCSTDQH--IHVCKLHSDK 111 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~~~-~-~~~~~d~~--i~i~d~~~~~ 111 (131)
....+.-..-.|+|+|+ + .+.+..|. |.+.+...+.
T Consensus 278 t~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~ 317 (425)
T COG0823 278 TNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ 317 (425)
T ss_pred ccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc
Confidence 43333334677899987 4 44555554 5666665443
No 348
>KOG1832|consensus
Probab=97.21 E-value=0.0007 Score=49.04 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=71.2
Q ss_pred CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc--EEEEeCCC-cEE
Q psy3840 27 GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS--FASCSTDQ-HIH 103 (131)
Q Consensus 27 ~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~d~-~i~ 103 (131)
.+....+..|+...+|++|+-+.+.++.|+..|.++++++.+|.......+|..+++-+.-+-+|. +.+++... -..
T Consensus 1091 Fr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Plsa 1170 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSA 1170 (1516)
T ss_pred cccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHH
Confidence 355667778889999999999999999999999999999999999889999999998887776765 33333333 467
Q ss_pred EEeCCC-CeeeEEEe
Q psy3840 104 VCKLHS-DKPVKSFE 117 (131)
Q Consensus 104 i~d~~~-~~~~~~~~ 117 (131)
+|++.+ +.+..++.
T Consensus 1171 LW~~~s~~~~~Hsf~ 1185 (1516)
T KOG1832|consen 1171 LWDASSTGGPRHSFD 1185 (1516)
T ss_pred HhccccccCcccccc
Confidence 898754 34445443
No 349
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=97.18 E-value=0.0045 Score=27.68 Aligned_cols=32 Identities=19% Similarity=0.188 Sum_probs=26.3
Q ss_pred ccEEEEEEcCCC---CEEEEEeCCCcEEEEECCCc
Q psy3840 38 GPIFALKWNKRG---NYILSAGVDKTTIIWDAASG 69 (131)
Q Consensus 38 ~~i~~~~~~~~~---~~~~s~~~d~~i~~~d~~~~ 69 (131)
+.+.+++|+|++ .+++-+...+.+.++|++++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 468999999844 48888888899999999853
No 350
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.14 E-value=0.026 Score=35.76 Aligned_cols=102 Identities=12% Similarity=0.082 Sum_probs=62.9
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC---CCceeec---ccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeec
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD---GSLKSTL---GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF 77 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~---~~~~~~~---~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 77 (131)
.+.+|+.||+- .|..|.+-..+ ...+.+. +.-...=+.++|+||+..++.+...|+|++||+.... +..+..
T Consensus 5 ~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I~p 82 (282)
T PF15492_consen 5 LSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVIPP 82 (282)
T ss_pred ecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEEcCc
Confidence 46678888775 67788877554 2222222 2222234788999999999999999999999986533 222221
Q ss_pred -------CCCCeEEEEEcCC-------CcEEEEeCCCcEEEEeC
Q psy3840 78 -------HSAPALDVDWQSN-------TSFASCSTDQHIHVCKL 107 (131)
Q Consensus 78 -------~~~~v~~~~~~~~-------~~~~~~~~d~~i~i~d~ 107 (131)
....|..+.|.+. ..++.-..+|.++=|-+
T Consensus 83 ~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~v 126 (282)
T PF15492_consen 83 AMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLV 126 (282)
T ss_pred ccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEE
Confidence 1245666666432 12555566666665544
No 351
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=97.09 E-value=0.041 Score=39.12 Aligned_cols=97 Identities=20% Similarity=0.346 Sum_probs=63.9
Q ss_pred EEEEEeC-CCeEEEEcCCCCceeecc--cccccEEEEEEcC--CCCEEEEEeCCCcEEEEECCC------c---ceeeee
Q psy3840 10 FLATGSY-DGYARIWTSDGSLKSTLG--QHKGPIFALKWNK--RGNYILSAGVDKTTIIWDAAS------G---QCEQQF 75 (131)
Q Consensus 10 ~l~~~~~-d~~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~------~---~~~~~~ 75 (131)
.++.... ...+.|||..+.....-. ...+.|..+.|.. +++.+++.+-...|.++.... + ..+..+
T Consensus 42 k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i 121 (631)
T PF12234_consen 42 KIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKI 121 (631)
T ss_pred cEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEE
Confidence 3444444 446999998854433222 3477899999854 888999999999999885421 1 122222
Q ss_pred --ecCC-CCeEEEEEcCCCcEEEEeCCCcEEEEeC
Q psy3840 76 --SFHS-APALDVDWQSNTSFASCSTDQHIHVCKL 107 (131)
Q Consensus 76 --~~~~-~~v~~~~~~~~~~~~~~~~d~~i~i~d~ 107 (131)
..++ .+|.+..|.++|.++.|+ ++.+.|+|-
T Consensus 122 ~i~~~T~h~Igds~Wl~~G~LvV~s-GNqlfv~dk 155 (631)
T PF12234_consen 122 DISSHTPHPIGDSIWLKDGTLVVGS-GNQLFVFDK 155 (631)
T ss_pred EeecCCCCCccceeEecCCeEEEEe-CCEEEEECC
Confidence 2233 578899999999876654 356778764
No 352
>KOG2395|consensus
Probab=97.01 E-value=0.01 Score=40.80 Aligned_cols=97 Identities=8% Similarity=0.090 Sum_probs=66.5
Q ss_pred EEEEeCCCeEEEEcCC--CC-ceeeccccc----ccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeE
Q psy3840 11 LATGSYDGYARIWTSD--GS-LKSTLGQHK----GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 83 (131)
Q Consensus 11 l~~~~~d~~i~~~~~~--~~-~~~~~~~~~----~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~ 83 (131)
-+.|-.+..|.=||.. +. .+....+|+ ....|.+-. ..-+++.|+.+|.|++||-........+++...+|.
T Consensus 397 TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT-~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~ 475 (644)
T KOG2395|consen 397 TLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATT-ESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIK 475 (644)
T ss_pred cEEeecCCceEEecccccCcceeeeeeccccccccccceeeec-CCceEEEeecCCcEEeehhhhhhhhhcccccCCcee
Confidence 3456667778888865 33 222233332 234444433 445789999999999999743344455777888999
Q ss_pred EEEEcCCCcEEEEeCCCcEEEEeCC
Q psy3840 84 DVDWQSNTSFASCSTDQHIHVCKLH 108 (131)
Q Consensus 84 ~~~~~~~~~~~~~~~d~~i~i~d~~ 108 (131)
.+..+.+|+.+.|+.+.++.+-++.
T Consensus 476 hVdvtadGKwil~Tc~tyLlLi~t~ 500 (644)
T KOG2395|consen 476 HVDVTADGKWILATCKTYLLLIDTL 500 (644)
T ss_pred eEEeeccCcEEEEecccEEEEEEEe
Confidence 9999999998778888888877764
No 353
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.98 E-value=0.027 Score=39.88 Aligned_cols=96 Identities=9% Similarity=0.036 Sum_probs=54.9
Q ss_pred cccCCCCEEEEEe------CCC--eEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCC------------CcEE
Q psy3840 3 SSRNNGSFLATGS------YDG--YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVD------------KTTI 62 (131)
Q Consensus 3 ~~~~~~~~l~~~~------~d~--~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d------------~~i~ 62 (131)
+++|+|+.++..- .|. .+.+++..+.......+. ....-.|+|+|..+.+.... +.+.
T Consensus 356 aiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~ 433 (591)
T PRK13616 356 ALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLA 433 (591)
T ss_pred eECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCC--CCCCceECCCCCceEEEecCcceEEEeccCCCceEE
Confidence 4688999887765 243 455555544332222222 36777899998766655422 2333
Q ss_pred EEECCCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEE
Q psy3840 63 IWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHV 104 (131)
Q Consensus 63 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i 104 (131)
+.++..++... .....|..+.|+|||. ++... +++|++
T Consensus 434 ~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 434 RTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred EEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 33443333222 2245799999999987 43332 466666
No 354
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.98 E-value=0.045 Score=35.60 Aligned_cols=99 Identities=10% Similarity=0.034 Sum_probs=61.7
Q ss_pred EEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC-CCcEEEEECCC--cc----e-eeeeecCCCCeEEEEEcCCC
Q psy3840 20 ARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV-DKTTIIWDAAS--GQ----C-EQQFSFHSAPALDVDWQSNT 91 (131)
Q Consensus 20 i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~~~--~~----~-~~~~~~~~~~v~~~~~~~~~ 91 (131)
+.-++..+..+..+..+-..-..++|||+++.++.+.. .+.+.-+++.. +. . ...+....+..-.++...++
T Consensus 145 lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG 224 (307)
T COG3386 145 LYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADG 224 (307)
T ss_pred EEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCC
Confidence 33344335555555555556678999999988777766 47788777652 21 1 11111223444556677777
Q ss_pred cEE-EEeCCC-cEEEEeCCCCeeeEEEecc
Q psy3840 92 SFA-SCSTDQ-HIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 92 ~~~-~~~~d~-~i~i~d~~~~~~~~~~~~~ 119 (131)
.+- ++..++ .|.+|+.. ++.+..+..+
T Consensus 225 ~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP 253 (307)
T COG3386 225 NLWVAAVWGGGRVVRFNPD-GKLLGEIKLP 253 (307)
T ss_pred CEEEecccCCceEEEECCC-CcEEEEEECC
Confidence 743 444444 89999988 8888888765
No 355
>KOG3617|consensus
Probab=96.96 E-value=0.0011 Score=47.78 Aligned_cols=65 Identities=18% Similarity=0.341 Sum_probs=55.7
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCceee-cccccccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSLKST-LGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 67 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~ 67 (131)
.|+|..-.|+.|-.-|.+.+|..+.+...+ ...|+.+|..+.|+++|..++++..-|.+.+|.+.
T Consensus 66 CWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 66 CWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 478888888999889999999987544443 45799999999999999999999999999999875
No 356
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=96.94 E-value=0.022 Score=38.83 Aligned_cols=97 Identities=12% Similarity=0.124 Sum_probs=50.9
Q ss_pred ccCCCCEEEEEeCCCeEEEE-cCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 4 SRNNGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
|.+ .+.+|+-..+.+|.++ +.+......+... ..+..+-- |..++..+.+ .+.+||..+++.++.+... +|
T Consensus 76 w~~-~n~yAv~~~~~~I~I~kn~~~~~~k~i~~~-~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~v 147 (443)
T PF04053_consen 76 WSS-RNRYAVLESSSTIKIYKNFKNEVVKSIKLP-FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AV 147 (443)
T ss_dssp E-T-SSEEEEE-TTS-EEEEETTEE-TT-----S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---E-
T ss_pred Eec-CccEEEEECCCeEEEEEcCccccceEEcCC-cccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC--CC
Confidence 555 4556666667888885 5543332222211 12333322 7777776555 8999999999999888743 48
Q ss_pred EEEEEcCCCcEEEEeCCCcEEEEeCC
Q psy3840 83 LDVDWQSNTSFASCSTDQHIHVCKLH 108 (131)
Q Consensus 83 ~~~~~~~~~~~~~~~~d~~i~i~d~~ 108 (131)
..+.|++++.+++-..+..+.+++.+
T Consensus 148 k~V~Ws~~g~~val~t~~~i~il~~~ 173 (443)
T PF04053_consen 148 KYVIWSDDGELVALVTKDSIYILKYN 173 (443)
T ss_dssp EEEEE-TTSSEEEEE-S-SEEEEEE-
T ss_pred cEEEEECCCCEEEEEeCCeEEEEEec
Confidence 89999999874443345567776643
No 357
>KOG0882|consensus
Probab=96.90 E-value=0.0035 Score=42.06 Aligned_cols=104 Identities=17% Similarity=0.222 Sum_probs=71.0
Q ss_pred CCCEEEEEeCCCeEEEEcCCC----CceeecccccccEEEEEEcCCCCEEEEEeC-CCcEEEEECCCcceeeeeecCCCC
Q psy3840 7 NGSFLATGSYDGYARIWTSDG----SLKSTLGQHKGPIFALKWNKRGNYILSAGV-DKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
-.+++.+++-||.++.|-... +.+..+..|-+.+.+++.+-++.++.+.+. |..++++|+.+-..+..+.-..-+
T Consensus 19 ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lP 98 (558)
T KOG0882|consen 19 KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLP 98 (558)
T ss_pred hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCC
Confidence 357889999999999998653 345566778899999999999999999777 999999999876555433321111
Q ss_pred -eEEEEEcCCC---cEEE-EeCCCcEEEEeCCCC
Q psy3840 82 -ALDVDWQSNT---SFAS-CSTDQHIHVCKLHSD 110 (131)
Q Consensus 82 -v~~~~~~~~~---~~~~-~~~d~~i~i~d~~~~ 110 (131)
..+...++.. .++. .-.++.+.++|-+..
T Consensus 99 g~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d 132 (558)
T KOG0882|consen 99 GFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGD 132 (558)
T ss_pred CceEEecCCCCeeeeEEeecccCCCcEEECCcCC
Confidence 1112223331 2333 335678899987654
No 358
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=96.90 E-value=0.071 Score=36.92 Aligned_cols=103 Identities=10% Similarity=0.082 Sum_probs=64.5
Q ss_pred EEEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEE------------------eCCCcEEEEECCCcc
Q psy3840 10 FLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSA------------------GVDKTTIIWDAASGQ 70 (131)
Q Consensus 10 ~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~------------------~~d~~i~~~d~~~~~ 70 (131)
.+++++.+|.+...|.. |+.+...... ...+..+| ..++.+ ..+|.+.-.|+.+++
T Consensus 303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~ 377 (488)
T cd00216 303 AIVHAPKNGFFYVLDRTTGKLISARPEV---EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGK 377 (488)
T ss_pred EEEEECCCceEEEEECCCCcEeeEeEee---ccccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCc
Confidence 57778889999999976 6666544321 11123333 222221 235778888999988
Q ss_pred eeeeeecCC--------CCe--EEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEec
Q psy3840 71 CEQQFSFHS--------APA--LDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 71 ~~~~~~~~~--------~~v--~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 118 (131)
.+....... .+. ..+.. .++.++.++.|+.++.+|.++|+.+.+.+.
T Consensus 378 ~~W~~~~~~~~~~~~~g~~~~~~~~~~-~g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 378 VVWEKREGTIRDSWNIGFPHWGGSLAT-AGNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred EeeEeeCCccccccccCCcccCcceEe-cCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 776655321 111 11111 234577888999999999999999888764
No 359
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=96.87 E-value=0.055 Score=34.99 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=73.5
Q ss_pred ccC-CCCEEEEEeCCCe-EEEEcCC-CCceeecccccccE--EEEEEcCCCCEEEEEeC-----CCcEEEEECC-Cccee
Q psy3840 4 SRN-NGSFLATGSYDGY-ARIWTSD-GSLKSTLGQHKGPI--FALKWNKRGNYILSAGV-----DKTTIIWDAA-SGQCE 72 (131)
Q Consensus 4 ~~~-~~~~l~~~~~d~~-i~~~~~~-~~~~~~~~~~~~~i--~~~~~~~~~~~~~s~~~-----d~~i~~~d~~-~~~~~ 72 (131)
.+| .+..++.+-.-|+ ..+||.. ++....+....+.- ---.|+++|+++++... .|.|-+||.. .-+.+
T Consensus 12 ~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri 91 (305)
T PF07433_consen 12 AHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRI 91 (305)
T ss_pred eCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEE
Confidence 455 5566777777665 6678876 44444443322211 13478999999998743 5789999998 55677
Q ss_pred eeeecCCCCeEEEEEcCCCc-EEEEe------------------CCCcEEEEeCCCCeeeEEE
Q psy3840 73 QQFSFHSAPALDVDWQSNTS-FASCS------------------TDQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 73 ~~~~~~~~~v~~~~~~~~~~-~~~~~------------------~d~~i~i~d~~~~~~~~~~ 116 (131)
..+..+.-....+.+.|++. |+.+. -+..+...|.++|+.+.+.
T Consensus 92 ~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~ 154 (305)
T PF07433_consen 92 GEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQV 154 (305)
T ss_pred eEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeee
Confidence 78887777778888999984 55442 1233445566667666553
No 360
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=96.87 E-value=0.061 Score=37.23 Aligned_cols=110 Identities=8% Similarity=0.033 Sum_probs=67.9
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccc------cEE--EEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKG------PIF--ALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH 78 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~------~i~--~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 78 (131)
+..++.++.++.+...|.. |+.+........ .+. .+... ++..++.++.++.++-+|.++++.+......
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~ 139 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN 139 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence 4567777778899988876 666655443221 000 01111 2267778888999999999999988776543
Q ss_pred CCC--eEEEEEcC---CCcEEEEe---------CCCcEEEEeCCCCeeeEEEec
Q psy3840 79 SAP--ALDVDWQS---NTSFASCS---------TDQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 79 ~~~--v~~~~~~~---~~~~~~~~---------~d~~i~i~d~~~~~~~~~~~~ 118 (131)
... -..+.-+| ++.++.++ .++.++-+|..+|+.+..+..
T Consensus 140 ~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~ 193 (488)
T cd00216 140 DQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYT 193 (488)
T ss_pred CCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeec
Confidence 221 01111122 24444443 357889999999998887654
No 361
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.84 E-value=0.059 Score=34.94 Aligned_cols=98 Identities=12% Similarity=0.192 Sum_probs=52.1
Q ss_pred cCCCCEEEEEeCCCeEEEEcCCCCceee-cccccccEEEEEEcCCCCEEEEEeCCCcEEEEEC-CCcceee----eeecC
Q psy3840 5 RNNGSFLATGSYDGYARIWTSDGSLKST-LGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA-ASGQCEQ----QFSFH 78 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~-~~~~~~~----~~~~~ 78 (131)
+++|.+++++.......-|+........ -..-...+..|.|.|++.+.+.+ ..|.++.=+. ...+... .+...
T Consensus 153 ~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~ 231 (302)
T PF14870_consen 153 SSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTN 231 (302)
T ss_dssp -TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS-
T ss_pred CCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccC
Confidence 5788888888655555677754322222 22245689999999998877755 8888887662 2222211 12122
Q ss_pred CCCeEEEEEcCCCcEEEEeCCCcEE
Q psy3840 79 SAPALDVDWQSNTSFASCSTDQHIH 103 (131)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~d~~i~ 103 (131)
...+..++|.+++.+.+++.++.+.
T Consensus 232 ~~~~ld~a~~~~~~~wa~gg~G~l~ 256 (302)
T PF14870_consen 232 GYGILDLAYRPPNEIWAVGGSGTLL 256 (302)
T ss_dssp -S-EEEEEESSSS-EEEEESTT-EE
T ss_pred ceeeEEEEecCCCCEEEEeCCccEE
Confidence 3357899999887755555555543
No 362
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.82 E-value=0.074 Score=35.64 Aligned_cols=109 Identities=14% Similarity=0.134 Sum_probs=73.3
Q ss_pred ccCCCCEEEEE-eCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC---CCcEEEEECCCcceeeeeecCC
Q psy3840 4 SRNNGSFLATG-SYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV---DKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 4 ~~~~~~~l~~~-~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~---d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
.++.+..++.. ..++.|.+.|...........-......++++|+++.+..+.. ++++.+.|..+++.........
T Consensus 81 v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~ 160 (381)
T COG3391 81 VNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGN 160 (381)
T ss_pred eCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCC
Confidence 45566645444 3467899999663333222222225578899998877666655 6889999998888877755433
Q ss_pred CCeEEEEEcCCCc-E-EEEeCCCcEEEEeCCCCeee
Q psy3840 80 APALDVDWQSNTS-F-ASCSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 80 ~~v~~~~~~~~~~-~-~~~~~d~~i~i~d~~~~~~~ 113 (131)
.+ ..+++.|++. + ++-..++.+.+.|.......
T Consensus 161 ~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~ 195 (381)
T COG3391 161 TP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV 195 (381)
T ss_pred Cc-ceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence 34 8899999976 4 44457889999997765444
No 363
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.79 E-value=0.065 Score=39.15 Aligned_cols=100 Identities=7% Similarity=-0.046 Sum_probs=64.8
Q ss_pred CCEEEEEe-CCCeEEEEcCC-CCceeeccccccc-EEEEEEcC-----CCCEEEEEeCCCcEEEEECCCcc--eeee-e-
Q psy3840 8 GSFLATGS-YDGYARIWTSD-GSLKSTLGQHKGP-IFALKWNK-----RGNYILSAGVDKTTIIWDAASGQ--CEQQ-F- 75 (131)
Q Consensus 8 ~~~l~~~~-~d~~i~~~~~~-~~~~~~~~~~~~~-i~~~~~~~-----~~~~~~s~~~d~~i~~~d~~~~~--~~~~-~- 75 (131)
.++|+.-. ....|+-.|++ |+.+..-..+... +..++-.. ....-+.|-.+..+..||+|-.. .+.. .
T Consensus 493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k 572 (794)
T PF08553_consen 493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSK 572 (794)
T ss_pred cceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccc
Confidence 34444432 34567777777 7777666665543 44443211 23456778888889999998632 2211 1
Q ss_pred -ecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeC
Q psy3840 76 -SFHSAPALDVDWQSNTSFASCSTDQHIHVCKL 107 (131)
Q Consensus 76 -~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~ 107 (131)
........+++-+.+|.++.|+.+|.|++||-
T Consensus 573 ~Y~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~ 605 (794)
T PF08553_consen 573 QYSSKNNFSCFATTEDGYIAVGSNKGDIRLYDR 605 (794)
T ss_pred ccccCCCceEEEecCCceEEEEeCCCcEEeecc
Confidence 12344678888888999999999999999993
No 364
>KOG3621|consensus
Probab=96.75 E-value=0.0048 Score=43.42 Aligned_cols=66 Identities=21% Similarity=0.312 Sum_probs=51.5
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCC--C--Cceee---cccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSD--G--SLKST---LGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 68 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~--~--~~~~~---~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 68 (131)
..+++..++|+|+..|.|.++-++ . ..... -+.|...|+++.|++++..+++|...|.+.+-.+..
T Consensus 83 ~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 83 SVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred EecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 356777888999999999999765 1 11111 123678899999999999999999999999877766
No 365
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.68 E-value=0.073 Score=33.72 Aligned_cols=111 Identities=14% Similarity=0.066 Sum_probs=64.5
Q ss_pred CCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeee---------
Q psy3840 6 NNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ--------- 74 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~--------- 74 (131)
..++.|+.|+++| +.+++.. .+..... +...|..+...|+-+.++.-+ |+.++++++..-.....
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~ 80 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS 80 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence 3578999999888 8888883 2222222 223499999999877766664 49999999876433221
Q ss_pred -----eecCCCCeEEEE-E-cCCC-cEEEEeCCCcEEEEeCCCC-----eeeEEEeccc
Q psy3840 75 -----FSFHSAPALDVD-W-QSNT-SFASCSTDQHIHVCKLHSD-----KPVKSFEGHT 120 (131)
Q Consensus 75 -----~~~~~~~v~~~~-~-~~~~-~~~~~~~d~~i~i~d~~~~-----~~~~~~~~~~ 120 (131)
.......+...+ - ..++ ..+.....+.|.+|..... +....+....
T Consensus 81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~ 139 (275)
T PF00780_consen 81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPD 139 (275)
T ss_pred ccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCC
Confidence 011123344444 1 1222 3444445558888877542 3455554433
No 366
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=96.60 E-value=0.075 Score=32.83 Aligned_cols=68 Identities=12% Similarity=0.083 Sum_probs=47.9
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCcceeeee-------e-------cCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCe
Q psy3840 46 NKRGNYILSAGVDKTTIIWDAASGQCEQQF-------S-------FHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 46 ~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~-------~-------~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~ 111 (131)
..++++++....+|.+++||+.+++.+..- . .....|..+..+.+|..+..-.+|..+.|+..-+.
T Consensus 19 ~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~L~~ 98 (219)
T PF07569_consen 19 ECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPDLGC 98 (219)
T ss_pred EeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccccce
Confidence 446888999999999999999987654221 1 23456778888888883333456788999876554
Q ss_pred ee
Q psy3840 112 PV 113 (131)
Q Consensus 112 ~~ 113 (131)
-+
T Consensus 99 W~ 100 (219)
T PF07569_consen 99 WI 100 (219)
T ss_pred eE
Confidence 33
No 367
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.50 E-value=0.13 Score=34.48 Aligned_cols=114 Identities=15% Similarity=0.137 Sum_probs=77.0
Q ss_pred cccCCCCEEEEEe-CCCeEEEEcCCCCceee------cccccccEEEEEEcCCCCEEEEEeCC---CcEEEEECCCccee
Q psy3840 3 SSRNNGSFLATGS-YDGYARIWTSDGSLKST------LGQHKGPIFALKWNKRGNYILSAGVD---KTTIIWDAASGQCE 72 (131)
Q Consensus 3 ~~~~~~~~l~~~~-~d~~i~~~~~~~~~~~~------~~~~~~~i~~~~~~~~~~~~~s~~~d---~~i~~~d~~~~~~~ 72 (131)
+++|+++.+++.. .++.|.+.|..+..+.. .... ..-..+.++|++..+...... +.+...|..++...
T Consensus 166 a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~-~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~ 244 (381)
T COG3391 166 AVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVG-TGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVT 244 (381)
T ss_pred EECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccC-CCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEE
Confidence 4688999777765 58889999987554442 2222 233677899999977666554 58889999888766
Q ss_pred ee-eecCCCCeEEEEEcCCCc-EE-EEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 73 QQ-FSFHSAPALDVDWQSNTS-FA-SCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 73 ~~-~~~~~~~v~~~~~~~~~~-~~-~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
.. ..........+...|++. +. .-...+.+.+.|..+......+.
T Consensus 245 ~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~ 292 (381)
T COG3391 245 ATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGP 292 (381)
T ss_pred EeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeec
Confidence 55 222211456678899987 33 33445789999988776666554
No 368
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.40 E-value=0.074 Score=34.65 Aligned_cols=98 Identities=12% Similarity=0.057 Sum_probs=59.4
Q ss_pred CCEEEEEeCCCeEEEEcCCCCc-eeecccccc--cEEEEEEcCCCCEEEEEeCCCcEEEEECCC-cceeeeeec--CCCC
Q psy3840 8 GSFLATGSYDGYARIWTSDGSL-KSTLGQHKG--PIFALKWNKRGNYILSAGVDKTTIIWDAAS-GQCEQQFSF--HSAP 81 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~~~~-~~~~~~~~~--~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~-~~~~~~~~~--~~~~ 81 (131)
+.+++++. ++.|.+|++.... +.....+.. .+.++.. .+++++.|+....+.++..+. ...+..+.. ....
T Consensus 98 ~~~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~ 174 (321)
T PF03178_consen 98 NGRLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRW 174 (321)
T ss_dssp TTEEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BE
T ss_pred CCEEEEee-cCEEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCcc
Confidence 44555554 5789999987444 333333333 4555544 466999999888888775443 222333322 2334
Q ss_pred eEEEEEcCCC-cEEEEeCCCcEEEEeCC
Q psy3840 82 ALDVDWQSNT-SFASCSTDQHIHVCKLH 108 (131)
Q Consensus 82 v~~~~~~~~~-~~~~~~~d~~i~i~d~~ 108 (131)
++++.+-+++ .++.++.+|.+.++...
T Consensus 175 v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 175 VTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred EEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 7777787554 58899999999988765
No 369
>KOG2444|consensus
Probab=96.30 E-value=0.012 Score=36.23 Aligned_cols=62 Identities=19% Similarity=0.258 Sum_probs=42.5
Q ss_pred CCCEEEEEeCCCeEEEEcCC-CCceeeccccc-ccEEEEEEcCCCCEEEEE--eCCCcEEEEECCC
Q psy3840 7 NGSFLATGSYDGYARIWTSD-GSLKSTLGQHK-GPIFALKWNKRGNYILSA--GVDKTTIIWDAAS 68 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~-~~i~~~~~~~~~~~~~s~--~~d~~i~~~d~~~ 68 (131)
++.+..+++.+|.|+.|++. ++.+.....|+ .++.....+..+..+..+ +.+..++.|++..
T Consensus 113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 34578889999999999987 55555555666 455555555556666665 6677777777654
No 370
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.28 E-value=0.16 Score=33.10 Aligned_cols=86 Identities=10% Similarity=0.116 Sum_probs=58.7
Q ss_pred cccCCCCEEEEEeC-CCeEEEEcCC-------CCc-eeecccccccEEEEEEcCCCCEEEEEeCCC-cEEEEECCCccee
Q psy3840 3 SSRNNGSFLATGSY-DGYARIWTSD-------GSL-KSTLGQHKGPIFALKWNKRGNYILSAGVDK-TTIIWDAASGQCE 72 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~i~~~~~~-------~~~-~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~-~i~~~d~~~~~~~ 72 (131)
+||||++.++.+.. .+.|+-|++. ++. ........+..-.++...+|.+.+++..+| .+..|+.. ++.+
T Consensus 169 a~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~ 247 (307)
T COG3386 169 AFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLL 247 (307)
T ss_pred EECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEE
Confidence 58999988888765 4667777654 111 111222345556677788899887665554 89999988 8888
Q ss_pred eeeecCCCCeEEEEEcC
Q psy3840 73 QQFSFHSAPALDVDWQS 89 (131)
Q Consensus 73 ~~~~~~~~~v~~~~~~~ 89 (131)
..+......+.+++|-.
T Consensus 248 ~~i~lP~~~~t~~~FgG 264 (307)
T COG3386 248 GEIKLPVKRPTNPAFGG 264 (307)
T ss_pred EEEECCCCCCccceEeC
Confidence 88876656777888854
No 371
>KOG4499|consensus
Probab=96.28 E-value=0.13 Score=32.17 Aligned_cols=87 Identities=8% Similarity=0.077 Sum_probs=54.5
Q ss_pred EEEEEEcCCCCEEEEE-eCCCcEEEEE--CCCcce-----eeeeec----CCCCeEEEEEcCCCc-EEEEeCCCcEEEEe
Q psy3840 40 IFALKWNKRGNYILSA-GVDKTTIIWD--AASGQC-----EQQFSF----HSAPALDVDWQSNTS-FASCSTDQHIHVCK 106 (131)
Q Consensus 40 i~~~~~~~~~~~~~s~-~~d~~i~~~d--~~~~~~-----~~~~~~----~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d 106 (131)
-..++|+.+.+.+... +.+-++.-|| +.+|.. +..+.. .....-.++...+|. +++.-..++|...|
T Consensus 160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~d 239 (310)
T KOG4499|consen 160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVD 239 (310)
T ss_pred CccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEEC
Confidence 3567888877766554 4467787777 555532 222221 111223444556777 45555667899999
Q ss_pred CCCCeeeEEEecccceEEEE
Q psy3840 107 LHSDKPVKSFEGHTRVYYLA 126 (131)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~ 126 (131)
..+|+.+.++......++++
T Consensus 240 p~tGK~L~eiklPt~qitsc 259 (310)
T KOG4499|consen 240 PTTGKILLEIKLPTPQITSC 259 (310)
T ss_pred CCCCcEEEEEEcCCCceEEE
Confidence 99999999988765555443
No 372
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=96.27 E-value=0.032 Score=36.89 Aligned_cols=68 Identities=15% Similarity=0.326 Sum_probs=45.3
Q ss_pred cCCCCEEEEE---------eCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeE
Q psy3840 46 NKRGNYILSA---------GVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVK 114 (131)
Q Consensus 46 ~~~~~~~~s~---------~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~ 114 (131)
||++++++.. +..+...++|+.+++....... ...+....|+|+++.++--.++.|++.++.+++..+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~~~ 77 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQETQ 77 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEecCceEEEECCCCCeEE
Confidence 4566655542 2345688999998765433332 567888999999985555667899999988775443
No 373
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=96.15 E-value=0.23 Score=33.63 Aligned_cols=77 Identities=6% Similarity=0.005 Sum_probs=50.8
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc-------------------------------------------eeeee
Q psy3840 39 PIFALKWNKRGNYILSAGVDKTTIIWDAASGQ-------------------------------------------CEQQF 75 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~-------------------------------------------~~~~~ 75 (131)
.|..+.|.++..-++.+...|.+-+|.....+ +...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 46777888877777888888887777443210 00111
Q ss_pred ecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEE
Q psy3840 76 SFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKS 115 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~ 115 (131)
....++|++++.+.=|.++.|..+|.+.|.|+|....+..
T Consensus 83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~ 122 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYN 122 (395)
T ss_dssp ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEee
Confidence 2335789999997668889999999999999987776665
No 374
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=96.14 E-value=0.34 Score=35.63 Aligned_cols=109 Identities=13% Similarity=0.101 Sum_probs=69.4
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeecccccc--------cEEEEEEc----------------CCCCEEEEEeCCCcEE
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHKG--------PIFALKWN----------------KRGNYILSAGVDKTTI 62 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~--------~i~~~~~~----------------~~~~~~~s~~~d~~i~ 62 (131)
+..++.++.++.|.-.|.. |+.+.++..... .++.+.+. ..+..++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 5677777788888888866 666665543221 01222221 1344788888999999
Q ss_pred EEECCCcceeeeeecCCCCe-------------EEEEEcC---CCcEEEEeC----------CCcEEEEeCCCCeeeEEE
Q psy3840 63 IWDAASGQCEQQFSFHSAPA-------------LDVDWQS---NTSFASCST----------DQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 63 ~~d~~~~~~~~~~~~~~~~v-------------~~~~~~~---~~~~~~~~~----------d~~i~i~d~~~~~~~~~~ 116 (131)
-.|.++|+.+..+... +.+ ..+.-.| ++.++.++. +|.|+-+|.++|+.+..+
T Consensus 274 ALDA~TGk~~W~fg~~-G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~ 352 (764)
T TIGR03074 274 ALDADTGKLCEDFGNN-GTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW 352 (764)
T ss_pred EEECCCCCEEEEecCC-CceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence 9999999988765421 111 0111122 455666542 578999999999998887
Q ss_pred e
Q psy3840 117 E 117 (131)
Q Consensus 117 ~ 117 (131)
.
T Consensus 353 ~ 353 (764)
T TIGR03074 353 D 353 (764)
T ss_pred e
Confidence 5
No 375
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=96.12 E-value=0.11 Score=32.08 Aligned_cols=63 Identities=16% Similarity=0.223 Sum_probs=44.6
Q ss_pred cCCCCEEEEEeCCCeEEEEcCCC-Ccee-------ecc-------cccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy3840 5 RNNGSFLATGSYDGYARIWTSDG-SLKS-------TLG-------QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 68 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~~-~~~~-------~~~-------~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 68 (131)
..+++++++-+.+|.+++||+.. +.+. .+. .....|..+.++.+|..+++-+ +|..+.|+..-
T Consensus 19 ~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 19 ECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred EeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 45688999999999999999872 2111 111 2446788888888888877664 46788888653
No 376
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.11 E-value=0.19 Score=32.41 Aligned_cols=55 Identities=13% Similarity=0.114 Sum_probs=41.7
Q ss_pred cccCCCCEEEEEeCC-----CeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEeC
Q psy3840 3 SSRNNGSFLATGSYD-----GYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGV 57 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d-----~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~ 57 (131)
.||+||.+|++.-+| |.|=+||.. ...+.++..|.-.-..+.+.+||+.++.++.
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanG 181 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANG 181 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCC
Confidence 489999999876443 457789976 4556677777767788999999999887643
No 377
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.09 E-value=0.042 Score=24.61 Aligned_cols=30 Identities=10% Similarity=0.187 Sum_probs=23.5
Q ss_pred CCeEEEEEcCC-C--c-EEEEeCCCcEEEEeCCC
Q psy3840 80 APALDVDWQSN-T--S-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 80 ~~v~~~~~~~~-~--~-~~~~~~d~~i~i~d~~~ 109 (131)
+.+.+++|+|+ + . ++.+-..+.+.++|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 35789999975 4 3 56677778999999995
No 378
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=96.05 E-value=0.31 Score=34.29 Aligned_cols=62 Identities=10% Similarity=0.043 Sum_probs=39.9
Q ss_pred CcEEEEECCCcceeeeeecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEeccc
Q psy3840 59 KTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120 (131)
Q Consensus 59 ~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~ 120 (131)
+.+.-+|+.+++.....+..............+.++.++.++.++.+|.++|+.+.+++...
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~ 502 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTGS 502 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEEeCCC
Confidence 45667788888777655432211111111233446667789999999999999998876543
No 379
>KOG1920|consensus
Probab=96.02 E-value=0.21 Score=38.01 Aligned_cols=102 Identities=15% Similarity=0.257 Sum_probs=60.9
Q ss_pred cccCCCCEEEEEeC---CCeEEEEcCCCC----ceeecccccccEEEEEEcCCCCEEEE---EeCCCcEEEEECCCcc--
Q psy3840 3 SSRNNGSFLATGSY---DGYARIWTSDGS----LKSTLGQHKGPIFALKWNKRGNYILS---AGVDKTTIIWDAASGQ-- 70 (131)
Q Consensus 3 ~~~~~~~~l~~~~~---d~~i~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~s---~~~d~~i~~~d~~~~~-- 70 (131)
+|-|.|..+++-.. |+.|.+|.-+|- ..........++..++|+.++..++. ......+++|...+-.
T Consensus 248 sWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWY 327 (1265)
T KOG1920|consen 248 SWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWY 327 (1265)
T ss_pred eecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeEEE
Confidence 57889999988643 456888887642 22223333445899999999998887 4445569999987631
Q ss_pred eeeeeecCCCCeEEEEEcCCC--cEEEEeCCCcEEEEe
Q psy3840 71 CEQQFSFHSAPALDVDWQSNT--SFASCSTDQHIHVCK 106 (131)
Q Consensus 71 ~~~~~~~~~~~v~~~~~~~~~--~~~~~~~d~~i~i~d 106 (131)
..+.+....... +.|+|.. ++..-..+|...++|
T Consensus 328 LKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v~~ 363 (1265)
T KOG1920|consen 328 LKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLVRD 363 (1265)
T ss_pred EEEEEecccccc--ccccCCCceeEEEEecCCcEEEEE
Confidence 112222111111 7777752 243333555554444
No 380
>KOG1916|consensus
Probab=95.94 E-value=0.005 Score=44.89 Aligned_cols=102 Identities=15% Similarity=0.213 Sum_probs=60.8
Q ss_pred CeEEEEcCC---CCceeec-----ccccccEEEEEEcC---CCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEE
Q psy3840 18 GYARIWTSD---GSLKSTL-----GQHKGPIFALKWNK---RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVD 86 (131)
Q Consensus 18 ~~i~~~~~~---~~~~~~~-----~~~~~~i~~~~~~~---~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 86 (131)
|.+.+|++. |+....+ ......+.-+.|+| +..++..+..++.+++.+...... ..+..|...+..++
T Consensus 153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a 231 (1283)
T KOG1916|consen 153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMA 231 (1283)
T ss_pred hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHH
Confidence 456678764 4432222 22333456666766 556777788889988766554322 22333443333332
Q ss_pred -----------EcCCCc-EEEEeCCCcEEEEeC-----CCCeeeEEEeccc
Q psy3840 87 -----------WQSNTS-FASCSTDQHIHVCKL-----HSDKPVKSFEGHT 120 (131)
Q Consensus 87 -----------~~~~~~-~~~~~~d~~i~i~d~-----~~~~~~~~~~~~~ 120 (131)
.+|||+ ++.+..||.+.+|.+ +...++..++.|.
T Consensus 232 ~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd 282 (1283)
T KOG1916|consen 232 FFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHD 282 (1283)
T ss_pred HHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCC
Confidence 578988 888999998777764 3335666666666
No 381
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=95.86 E-value=0.33 Score=33.02 Aligned_cols=64 Identities=20% Similarity=0.320 Sum_probs=45.8
Q ss_pred ccCCCCEEEEEeCC----------C-eEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy3840 4 SRNNGSFLATGSYD----------G-YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 68 (131)
Q Consensus 4 ~~~~~~~l~~~~~d----------~-~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 68 (131)
.+|.|.-+|...++ . .|++|+..|+.+....=..+.+.++.|..+.. ++....||.++++|+..
T Consensus 36 ~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~sG~ll~~i~w~~~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~G 110 (410)
T PF04841_consen 36 VAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSSGKLLSSIPWDSGRIVGMGWTDDEE-LVVVQSDGTVRVYDLFG 110 (410)
T ss_pred EcCCCceEEEEecCcccccccCCCCcEEEEECCCCCEeEEEEECCCCEEEEEECCCCe-EEEEEcCCEEEEEeCCC
Confidence 34555556555333 1 59999999888877544448999999988655 45566999999999863
No 382
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=95.84 E-value=0.24 Score=31.28 Aligned_cols=106 Identities=13% Similarity=0.159 Sum_probs=62.3
Q ss_pred cccCCCC-EEEEEeCCCeEEEEcCCCCceeecccc-cccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc------eeee
Q psy3840 3 SSRNNGS-FLATGSYDGYARIWTSDGSLKSTLGQH-KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ------CEQQ 74 (131)
Q Consensus 3 ~~~~~~~-~l~~~~~d~~i~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~------~~~~ 74 (131)
+|+|+.+ ++++....+.|..++.+|+.+....-. .+-...+++..++.++++...++.+.++++.... ....
T Consensus 28 Ty~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~ 107 (248)
T PF06977_consen 28 TYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQK 107 (248)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEE
T ss_pred EEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceE
Confidence 4677655 555555677888888888877665432 2456788888788888877779999998884321 1111
Q ss_pred ee-----cCCCCeEEEEEcCCC-cEEEEeCCCcEEEEeCC
Q psy3840 75 FS-----FHSAPALDVDWQSNT-SFASCSTDQHIHVCKLH 108 (131)
Q Consensus 75 ~~-----~~~~~v~~~~~~~~~-~~~~~~~d~~i~i~d~~ 108 (131)
+. ..+..+..++|+|.+ +++.+....-..+|.++
T Consensus 108 ~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~ 147 (248)
T PF06977_consen 108 ISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVN 147 (248)
T ss_dssp EE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred EecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEc
Confidence 21 234568899999974 46666555545555544
No 383
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=95.81 E-value=0.15 Score=35.83 Aligned_cols=37 Identities=22% Similarity=0.443 Sum_probs=28.0
Q ss_pred cEEEEEEcC----CCCEEEEEeCCCcEEEEECCCcceeeee
Q psy3840 39 PIFALKWNK----RGNYILSAGVDKTTIIWDAASGQCEQQF 75 (131)
Q Consensus 39 ~i~~~~~~~----~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 75 (131)
....+++++ +..++++.+.|+.+|+||+.+++++...
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 455566666 6789999999999999999999885543
No 384
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=95.73 E-value=0.37 Score=32.57 Aligned_cols=107 Identities=17% Similarity=0.234 Sum_probs=62.5
Q ss_pred cccCCCCEEEEEe-CCC----eEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCC-----------cEEEEE
Q psy3840 3 SSRNNGSFLATGS-YDG----YARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDK-----------TTIIWD 65 (131)
Q Consensus 3 ~~~~~~~~l~~~~-~d~----~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~-----------~i~~~d 65 (131)
.++|++++++.+- ..| .++++|+. ++.+...... .....+.|.++++.++....+. .++.|.
T Consensus 130 ~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~-~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~ 208 (414)
T PF02897_consen 130 SVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN-PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHK 208 (414)
T ss_dssp EETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE-EESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEE
T ss_pred eECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc-cccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEE
Confidence 4789999998763 344 48899997 4443322111 1223489999988776654332 367777
Q ss_pred CCCccee--eeeecCCCC--eEEEEEcCCCc-E-EEEeC--C-CcEEEEeCCCC
Q psy3840 66 AASGQCE--QQFSFHSAP--ALDVDWQSNTS-F-ASCST--D-QHIHVCKLHSD 110 (131)
Q Consensus 66 ~~~~~~~--~~~~~~~~~--v~~~~~~~~~~-~-~~~~~--d-~~i~i~d~~~~ 110 (131)
+.+...- ..+...... ...+..+++++ + +.... + ..+++.++..+
T Consensus 209 ~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 209 LGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp TTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred CCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 7665432 334333333 55778888887 3 32322 3 45888888764
No 385
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=95.72 E-value=0.45 Score=33.51 Aligned_cols=108 Identities=6% Similarity=-0.012 Sum_probs=66.7
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCceeeccccc-ccEEE----------EEEcCCCCEEEEEeCCCcEEEEECCCcceeeee
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLKSTLGQHK-GPIFA----------LKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF 75 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~-~~i~~----------~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~ 75 (131)
+..+++++.++.|.-.|.. |+.+.+..... ..+.. +++ .+..++.++.++.+.-.|.++|+.+...
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 4667777778888888876 66666543211 11111 111 2345677888999999999999988765
Q ss_pred ecCCCC-eEEEEEcC---CCcEEEEeC------CCcEEEEeCCCCeeeEEEe
Q psy3840 76 SFHSAP-ALDVDWQS---NTSFASCST------DQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 76 ~~~~~~-v~~~~~~~---~~~~~~~~~------d~~i~i~d~~~~~~~~~~~ 117 (131)
...... -..+.-+| +++++.+.. ++.|.-+|.++|+.+..+.
T Consensus 147 ~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~ 198 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRY 198 (527)
T ss_pred ccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence 431111 01111122 455555432 6789999999999888764
No 386
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=95.65 E-value=0.29 Score=35.56 Aligned_cols=101 Identities=11% Similarity=0.109 Sum_probs=64.7
Q ss_pred CCCEEEEEeCCCeEEEEcCC------CCc---e-----------eecccccccEEEEEEc--CCCCEEEEEeCCCcEEEE
Q psy3840 7 NGSFLATGSYDGYARIWTSD------GSL---K-----------STLGQHKGPIFALKWN--KRGNYILSAGVDKTTIIW 64 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~------~~~---~-----------~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~ 64 (131)
+.+.|+.+.+||.|.+|.++ .+. . .........++.++++ ...+++|+++....|.+|
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF 192 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVF 192 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence 35788999999999999653 000 0 0001123478899998 788888888888888887
Q ss_pred ECCCc--ce-eeeeecCCCCeEEEEEcCC-----C--cEEEEeCCCcEEEEeC
Q psy3840 65 DAASG--QC-EQQFSFHSAPALDVDWQSN-----T--SFASCSTDQHIHVCKL 107 (131)
Q Consensus 65 d~~~~--~~-~~~~~~~~~~v~~~~~~~~-----~--~~~~~~~d~~i~i~d~ 107 (131)
-.... +. ...-..+..-|.++.|-++ | .+++++=.|.+.+|++
T Consensus 193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 55432 11 1111124456778888553 3 2566777898888877
No 387
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.59 E-value=0.61 Score=34.17 Aligned_cols=72 Identities=11% Similarity=0.217 Sum_probs=48.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCC---------cce---eeeee--------cCCCCeEEEEEcCC----CcEE
Q psy3840 39 PIFALKWNKRGNYILSAGVDKTTIIWDAAS---------GQC---EQQFS--------FHSAPALDVDWQSN----TSFA 94 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~---------~~~---~~~~~--------~~~~~v~~~~~~~~----~~~~ 94 (131)
.|..+.++|+|++++..+..|...+.=.+. ++. .+.+. .....|..+.|+|. ..++
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~ 165 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLV 165 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEE
Confidence 467788999999999888876444322221 111 11111 22346889999985 3488
Q ss_pred EEeCCCcEEEEeCCCC
Q psy3840 95 SCSTDQHIHVCKLHSD 110 (131)
Q Consensus 95 ~~~~d~~i~i~d~~~~ 110 (131)
.-..|+.+++||+...
T Consensus 166 vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 166 VLTSDNTLRLYDISDP 181 (717)
T ss_pred EEecCCEEEEEecCCC
Confidence 8899999999999754
No 388
>KOG1916|consensus
Probab=95.34 E-value=0.018 Score=42.18 Aligned_cols=108 Identities=11% Similarity=0.122 Sum_probs=65.0
Q ss_pred cCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEE-----------EEcCCCCEEEEEeCCCcEEEEECC-----C
Q psy3840 5 RNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFAL-----------KWNKRGNYILSAGVDKTTIIWDAA-----S 68 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~-----------~~~~~~~~~~s~~~d~~i~~~d~~-----~ 68 (131)
-++.-++..+..++++++.+.+......+.+|...+..+ ..+|||..++.+..||.++.|.+. .
T Consensus 192 ~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~ 271 (1283)
T KOG1916|consen 192 AVNKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIV 271 (1283)
T ss_pred ccccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeecccc
Confidence 345567777778888888776543334444555443332 368999999999999998888653 2
Q ss_pred cceeeeeecCCC--CeEEEEEcC------C-Cc---EEE-EeCCCcEEEEeCCCCeee
Q psy3840 69 GQCEQQFSFHSA--PALDVDWQS------N-TS---FAS-CSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 69 ~~~~~~~~~~~~--~v~~~~~~~------~-~~---~~~-~~~d~~i~i~d~~~~~~~ 113 (131)
..++..++.|.+ .++.+ ++. + +. +++ ...+..+++|.....+|+
T Consensus 272 ~rclhewkphd~~p~vC~l-c~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 272 HRCLHEWKPHDKHPRVCWL-CHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred HhhhhccCCCCCCCceeee-eccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 334444444442 23333 322 1 22 233 344567999988776665
No 389
>KOG4499|consensus
Probab=95.32 E-value=0.39 Score=30.22 Aligned_cols=87 Identities=9% Similarity=0.043 Sum_probs=57.6
Q ss_pred ccCCCCEE-EEEeCCCeEEEEcC--C-C-----Cceeeccc---cc-ccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc
Q psy3840 4 SRNNGSFL-ATGSYDGYARIWTS--D-G-----SLKSTLGQ---HK-GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ 70 (131)
Q Consensus 4 ~~~~~~~l-~~~~~d~~i~~~~~--~-~-----~~~~~~~~---~~-~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~ 70 (131)
|+.+...+ .+-+.+-+|.-||. + | +.+..++. .. ..--.++.+.+|.++++.-..+++...|+.+|+
T Consensus 165 Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK 244 (310)
T KOG4499|consen 165 WDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGK 244 (310)
T ss_pred ccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCc
Confidence 44444444 44445667777773 3 2 11222211 11 112345556788888888889999999999999
Q ss_pred eeeeeecCCCCeEEEEEcCC
Q psy3840 71 CEQQFSFHSAPALDVDWQSN 90 (131)
Q Consensus 71 ~~~~~~~~~~~v~~~~~~~~ 90 (131)
.+..+.-....+++++|-..
T Consensus 245 ~L~eiklPt~qitsccFgGk 264 (310)
T KOG4499|consen 245 ILLEIKLPTPQITSCCFGGK 264 (310)
T ss_pred EEEEEEcCCCceEEEEecCC
Confidence 99998888889999999654
No 390
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=95.16 E-value=0.29 Score=34.47 Aligned_cols=73 Identities=15% Similarity=0.140 Sum_probs=42.8
Q ss_pred CCCCEEEEEeCCCcEEEEECCC----cceeee-----------ee-----------cCCCCeEEEEEcC----C-CcEEE
Q psy3840 47 KRGNYILSAGVDKTTIIWDAAS----GQCEQQ-----------FS-----------FHSAPALDVDWQS----N-TSFAS 95 (131)
Q Consensus 47 ~~~~~~~s~~~d~~i~~~d~~~----~~~~~~-----------~~-----------~~~~~v~~~~~~~----~-~~~~~ 95 (131)
++...++.+..||.+....... +..... +. .........+.++ + ..+++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 4666778888888888776553 111110 00 0112344555554 3 33789
Q ss_pred EeCCCcEEEEeCCCCeeeEEEecc
Q psy3840 96 CSTDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 96 ~~~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
.+.|+.+++||+++++++.+....
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~~~~ 259 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATIDLL 259 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEEETT
T ss_pred EeCCCeEEEEECCCCeEEEEeccc
Confidence 999999999999999997776443
No 391
>PHA02713 hypothetical protein; Provisional
Probab=94.76 E-value=0.43 Score=33.81 Aligned_cols=71 Identities=1% Similarity=-0.002 Sum_probs=40.7
Q ss_pred CCCEEEEEeCC------CcEEEEECCC-c--ceeeeeecCCCCeEEEEEcCCCc-EEEEeCCC--cEEEEeCCCCeeeEE
Q psy3840 48 RGNYILSAGVD------KTTIIWDAAS-G--QCEQQFSFHSAPALDVDWQSNTS-FASCSTDQ--HIHVCKLHSDKPVKS 115 (131)
Q Consensus 48 ~~~~~~s~~~d------~~i~~~d~~~-~--~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~--~i~i~d~~~~~~~~~ 115 (131)
+++..+.|+.+ ..+..||+.+ . ..+..++........... +++ +++|+.++ .+..||..+.+--..
T Consensus 463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~ 540 (557)
T PHA02713 463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHI 540 (557)
T ss_pred CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCcccccccch
Confidence 56667777654 2356788876 2 333344333222222222 455 68888887 688889887765444
Q ss_pred Eeccc
Q psy3840 116 FEGHT 120 (131)
Q Consensus 116 ~~~~~ 120 (131)
...|.
T Consensus 541 ~~~~~ 545 (557)
T PHA02713 541 CHQHS 545 (557)
T ss_pred hhhcC
Confidence 44443
No 392
>KOG3630|consensus
Probab=94.76 E-value=0.19 Score=38.15 Aligned_cols=69 Identities=9% Similarity=-0.062 Sum_probs=47.8
Q ss_pred ccEEEEEEcCCC-CEEEEEeCCCcEEEEECCCcc-eeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeC
Q psy3840 38 GPIFALKWNKRG-NYILSAGVDKTTIIWDAASGQ-CEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKL 107 (131)
Q Consensus 38 ~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~ 107 (131)
....++.|.|.- ...+....|+.|++.-+.... .+..+. .....++++|+|.|+ ++.|...|++.-|-.
T Consensus 156 vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P 227 (1405)
T KOG3630|consen 156 VFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP 227 (1405)
T ss_pred cccccccccCCccchhhhhccccchhhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeec
Confidence 345677888843 345666778888877665322 222222 345789999999987 888988999887754
No 393
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=94.71 E-value=0.68 Score=31.61 Aligned_cols=74 Identities=11% Similarity=0.090 Sum_probs=46.9
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC-CCceeeccccccc-EEEEEEc-CCC---------------C--EEEEEeCCCcEEE
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGP-IFALKWN-KRG---------------N--YILSAGVDKTTII 63 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~-i~~~~~~-~~~---------------~--~~~s~~~d~~i~~ 63 (131)
.+|++++.++...-|.|.++|+. +..++..++..+. +.-+... +.. . +++-+-.-|.+.+
T Consensus 315 ~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyaprRg~lEv 394 (415)
T PF14655_consen 315 LSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPRRGILEV 394 (415)
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEeccCCeEEE
Confidence 57888988888888999999987 4445555554331 1111111 111 1 2334566788889
Q ss_pred EECCCcceeeeeec
Q psy3840 64 WDAASGQCEQQFSF 77 (131)
Q Consensus 64 ~d~~~~~~~~~~~~ 77 (131)
|.++.|..+..+..
T Consensus 395 W~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 395 WSMRQGPRVAAFNV 408 (415)
T ss_pred EecCCCCEEEEEEe
Confidence 99988887776654
No 394
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.68 E-value=0.93 Score=32.69 Aligned_cols=68 Identities=18% Similarity=0.267 Sum_probs=45.1
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee-cCCCCeEEEEEc--CCCc-EEEEeCCCcEEEEe
Q psy3840 39 PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS-FHSAPALDVDWQ--SNTS-FASCSTDQHIHVCK 106 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~--~~~~-~~~~~~d~~i~i~d 106 (131)
....+.-+.-++..++.+....+.|||.+.+....... ...+.|.++.|. |+++ +++.+-.+.|.+|-
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 33444445545555555556679999999876443322 346789999995 5676 77778888888874
No 395
>KOG2395|consensus
Probab=94.62 E-value=0.68 Score=32.50 Aligned_cols=95 Identities=8% Similarity=-0.067 Sum_probs=58.8
Q ss_pred EEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCC-------EEEEEeCCCcEEEEECCCc-c-eeeeeec----
Q psy3840 12 ATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGN-------YILSAGVDKTTIIWDAASG-Q-CEQQFSF---- 77 (131)
Q Consensus 12 ~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~-------~~~s~~~d~~i~~~d~~~~-~-~~~~~~~---- 77 (131)
..+.....++--|++ |+.+.+-+.+.. |.-+.+.|+.. .=+.|-.+..+.-||++-. . .+..-+.
T Consensus 350 ~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~ 428 (644)
T KOG2395|consen 350 MDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYS 428 (644)
T ss_pred eCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccc
Confidence 334444456666766 666655555544 66666666432 2245667778888998842 2 1211111
Q ss_pred CCCCeEEEEEcCCCcEEEEeCCCcEEEEeC
Q psy3840 78 HSAPALDVDWQSNTSFASCSTDQHIHVCKL 107 (131)
Q Consensus 78 ~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~ 107 (131)
......|.+-..+|.++.|+.+|.|++||-
T Consensus 429 ~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr 458 (644)
T KOG2395|consen 429 TKNNFSCFATTESGYIVVGSLKGDIRLYDR 458 (644)
T ss_pred cccccceeeecCCceEEEeecCCcEEeehh
Confidence 123456777777888999999999999984
No 396
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=94.61 E-value=0.91 Score=30.84 Aligned_cols=72 Identities=11% Similarity=0.132 Sum_probs=48.2
Q ss_pred ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee--c------CCCCeEEEEEc-----CCC---c-EEEEeC
Q psy3840 36 HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS--F------HSAPALDVDWQ-----SNT---S-FASCST 98 (131)
Q Consensus 36 ~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~--~------~~~~v~~~~~~-----~~~---~-~~~~~~ 98 (131)
..++|++++.+ +=-.++.|..+|.+.+.|+|....+..-. . ....++++.|. .|+ . ++.|..
T Consensus 85 ~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn 163 (395)
T PF08596_consen 85 KQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN 163 (395)
T ss_dssp -S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred cCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence 35788898876 55688899999999999998776554421 1 22346777774 233 2 677888
Q ss_pred CCcEEEEeCC
Q psy3840 99 DQHIHVCKLH 108 (131)
Q Consensus 99 d~~i~i~d~~ 108 (131)
.|.+.+|.+.
T Consensus 164 ~G~v~~fkIl 173 (395)
T PF08596_consen 164 SGNVLTFKIL 173 (395)
T ss_dssp TSEEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 8999999764
No 397
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=94.54 E-value=0.16 Score=22.02 Aligned_cols=37 Identities=8% Similarity=0.126 Sum_probs=25.0
Q ss_pred CCCc-E-EEEeCCCcEEEEeCCCCeeeEEEecccceEEE
Q psy3840 89 SNTS-F-ASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYL 125 (131)
Q Consensus 89 ~~~~-~-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 125 (131)
|+++ + ++...++.|.++|..+++.+..+..-..+...
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i 39 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGV 39 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceE
Confidence 3444 4 44556789999999999888887654444333
No 398
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=94.49 E-value=0.72 Score=29.20 Aligned_cols=103 Identities=15% Similarity=0.130 Sum_probs=60.4
Q ss_pred cccCCCCEEEEEe--C-CCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEE-CCCccee-eee--
Q psy3840 3 SSRNNGSFLATGS--Y-DGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD-AASGQCE-QQF-- 75 (131)
Q Consensus 3 ~~~~~~~~l~~~~--~-d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d-~~~~~~~-~~~-- 75 (131)
+.+++++.++... . ...+.++...+.....+.+ ..+..-.|++++...+....+...+++. ...+... ...
T Consensus 30 AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g--~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~ 107 (253)
T PF10647_consen 30 AVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTG--GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDW 107 (253)
T ss_pred EECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccC--CccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecc
Confidence 4688898887766 2 3345565554433333322 2567778999988777777666666663 3333221 111
Q ss_pred ecCCCCeEEEEEcCCCc-EEEE---eCCCcEEEEeC
Q psy3840 76 SFHSAPALDVDWQSNTS-FASC---STDQHIHVCKL 107 (131)
Q Consensus 76 ~~~~~~v~~~~~~~~~~-~~~~---~~d~~i~i~d~ 107 (131)
......|.++.++|||. ++.- ..++.|.+--+
T Consensus 108 ~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V 143 (253)
T PF10647_consen 108 PGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGV 143 (253)
T ss_pred cccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence 11122899999999986 4332 23466766543
No 399
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=94.42 E-value=0.15 Score=20.94 Aligned_cols=27 Identities=11% Similarity=0.123 Sum_probs=21.9
Q ss_pred CCcEEEEeCCCcEEEEeCCCCeeeEEE
Q psy3840 90 NTSFASCSTDQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 90 ~~~~~~~~~d~~i~i~d~~~~~~~~~~ 116 (131)
++.++.++.++.++.+|.++|+.+.++
T Consensus 6 ~~~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 6 DGTVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred CCEEEEEcCCCEEEEEEcccCcEEEEc
Confidence 456778888999999999999887654
No 400
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=94.32 E-value=0.99 Score=30.14 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=61.4
Q ss_pred CEEEEEeCCCeEEEEcCC-CCceeeccccc--ccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCC-CeEE
Q psy3840 9 SFLATGSYDGYARIWTSD-GSLKSTLGQHK--GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA-PALD 84 (131)
Q Consensus 9 ~~l~~~~~d~~i~~~~~~-~~~~~~~~~~~--~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~v~~ 84 (131)
..+.++..+|.+.-.|.. +..+.....-. ..+..-.+..+|+ ++.++.++.++.+|.++|+.+........ ....
T Consensus 69 g~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~ 147 (370)
T COG1520 69 GTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYAS 147 (370)
T ss_pred CeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCeEEec
Confidence 445555677777777766 33333222111 1111112222455 67777888888899888988877765440 1111
Q ss_pred EEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 85 VDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 85 ~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
-..-.++.+...+.++.+.-.|-.+++.+..+.
T Consensus 148 ~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~ 180 (370)
T COG1520 148 PPVVGDGTVYVGTDDGHLYALNADTGTLKWTYE 180 (370)
T ss_pred CcEEcCcEEEEecCCCeEEEEEccCCcEEEEEe
Confidence 112224445555577888888888887766654
No 401
>KOG2247|consensus
Probab=94.14 E-value=0.013 Score=39.99 Aligned_cols=100 Identities=13% Similarity=0.230 Sum_probs=67.6
Q ss_pred ccCCCCEEEE-EeCCCeEEEEcCCCCceeeccc-ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 4 SRNNGSFLAT-GSYDGYARIWTSDGSLKSTLGQ-HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 4 ~~~~~~~l~~-~~~d~~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
|..++..++. +-..+.+.+|+++.+....+.. .+..-.-+.|++....++.+...+.+.+++..+.+..-....|..+
T Consensus 82 wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RR 161 (615)
T KOG2247|consen 82 WDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRR 161 (615)
T ss_pred hccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccc
Confidence 3445555444 4457789999987433333321 1111223678888888888889999999998887766555557778
Q ss_pred eEEEEEcCCCcEEEEeCCCcEE
Q psy3840 82 ALDVDWQSNTSFASCSTDQHIH 103 (131)
Q Consensus 82 v~~~~~~~~~~~~~~~~d~~i~ 103 (131)
+..+++.+++..+.++.|..+.
T Consensus 162 gtq~av~lEd~vil~dcd~~L~ 183 (615)
T KOG2247|consen 162 GTQIAVTLEDYVILCDCDNTLS 183 (615)
T ss_pred eeEEEecccceeeecCcHHHHH
Confidence 8999999988877776655443
No 402
>KOG2377|consensus
Probab=94.14 E-value=1.3 Score=30.77 Aligned_cols=91 Identities=19% Similarity=0.124 Sum_probs=55.7
Q ss_pred CEEEEEeCCCeEEEEcCCC----CceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCccee----eeeecCCC
Q psy3840 9 SFLATGSYDGYARIWTSDG----SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE----QQFSFHSA 80 (131)
Q Consensus 9 ~~l~~~~~d~~i~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~----~~~~~~~~ 80 (131)
++.+.+...|-+.-|-+++ .++..-....++|.++.|++|.+.+++--.+.++.+++....+.. ...+....
T Consensus 34 NkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~ 113 (657)
T KOG2377|consen 34 NKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNA 113 (657)
T ss_pred cceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcc
Confidence 3333334455566665542 222222345679999999999999999999999999987433221 11222334
Q ss_pred CeEEEEEcCCCcEEEEeCC
Q psy3840 81 PALDVDWQSNTSFASCSTD 99 (131)
Q Consensus 81 ~v~~~~~~~~~~~~~~~~d 99 (131)
.+....|..+..++.-...
T Consensus 114 ~IlGF~W~~s~e~A~i~~~ 132 (657)
T KOG2377|consen 114 NILGFCWTSSTEIAFITDQ 132 (657)
T ss_pred eeEEEEEecCeeEEEEecC
Confidence 5777888766545444433
No 403
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=94.13 E-value=0.21 Score=21.66 Aligned_cols=31 Identities=13% Similarity=0.180 Sum_probs=22.8
Q ss_pred CCCCEEEEEe-CCCcEEEEECCCcceeeeeec
Q psy3840 47 KRGNYILSAG-VDKTTIIWDAASGQCEQQFSF 77 (131)
Q Consensus 47 ~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~ 77 (131)
|+++.++.+. .++++.++|..+++.+..+..
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 4566555554 578999999988887777665
No 404
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=94.00 E-value=1.3 Score=30.25 Aligned_cols=56 Identities=16% Similarity=0.300 Sum_probs=40.3
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC-CCCeEEEEEcCCCc
Q psy3840 37 KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH-SAPALDVDWQSNTS 92 (131)
Q Consensus 37 ~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 92 (131)
.+++..|+.||+++.++.-..+|.+.+....-.+....+... ......+.|+.+..
T Consensus 216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da 272 (410)
T PF04841_consen 216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA 272 (410)
T ss_pred CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence 368999999999999999989999988775544444444432 34556777776543
No 405
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=93.76 E-value=1.4 Score=29.83 Aligned_cols=69 Identities=13% Similarity=0.132 Sum_probs=42.7
Q ss_pred EEEEEcCCCCEEEEE-eCCC----cEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EE-EEeC----------CCcEE
Q psy3840 41 FALKWNKRGNYILSA-GVDK----TTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FA-SCST----------DQHIH 103 (131)
Q Consensus 41 ~~~~~~~~~~~~~s~-~~d~----~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~-~~~~----------d~~i~ 103 (131)
....++|++++++-+ +..| .++++|+.+++.+..-... .....+.|.+++. ++ +... ...|+
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~-~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~ 205 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN-PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVY 205 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE-EESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc-cccceEEEeCCCCEEEEEEeCcccccccCCCCcEEE
Confidence 356889999988754 3334 4899999999766432211 1222399999966 43 3322 22377
Q ss_pred EEeCCCC
Q psy3840 104 VCKLHSD 110 (131)
Q Consensus 104 i~d~~~~ 110 (131)
.|.+.+.
T Consensus 206 ~~~~gt~ 212 (414)
T PF02897_consen 206 RHKLGTP 212 (414)
T ss_dssp EEETTS-
T ss_pred EEECCCC
Confidence 7777665
No 406
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=93.76 E-value=1.2 Score=29.10 Aligned_cols=70 Identities=11% Similarity=0.198 Sum_probs=40.4
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCcEEEEeCCCcEEEEe
Q psy3840 37 KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCK 106 (131)
Q Consensus 37 ~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d 106 (131)
.+.+..+.-++++++++++.......-||.-...=..........+..|.|.|++.+......+.++.=+
T Consensus 144 ~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~ 213 (302)
T PF14870_consen 144 SGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSD 213 (302)
T ss_dssp ---EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE
T ss_pred cceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEeCCcEEEEcc
Confidence 4567778888999988888766666678754321111122235689999999998865556778887766
No 407
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=93.51 E-value=0.84 Score=28.94 Aligned_cols=64 Identities=14% Similarity=0.182 Sum_probs=41.7
Q ss_pred CCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCee
Q psy3840 47 KRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKP 112 (131)
Q Consensus 47 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~ 112 (131)
..++.++.|..+| +++++........... ....|..+...++-.++..-.|+.++++++.....
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~ 68 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLSDGQLYVYDLDSLEP 68 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEcCCccEEEEchhhcc
Confidence 3577888998888 8889983332222222 22348889888874433333459999999875433
No 408
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=93.48 E-value=2 Score=30.75 Aligned_cols=100 Identities=7% Similarity=0.068 Sum_probs=57.2
Q ss_pred CCEEEEEeCCCeEEEEcCC------CCceeecccc-----cccEEEEEEcCCCCEEEEEeCCCcEEEEECCC--cceeee
Q psy3840 8 GSFLATGSYDGYARIWTSD------GSLKSTLGQH-----KGPIFALKWNKRGNYILSAGVDKTTIIWDAAS--GQCEQQ 74 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~------~~~~~~~~~~-----~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~--~~~~~~ 74 (131)
...+++......|.+|.+. ++.+..-..+ .---..+.|+|....++.-.....--+++++. .+....
T Consensus 72 ~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaD 151 (671)
T PF15390_consen 72 TPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKAD 151 (671)
T ss_pred CCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEe
Confidence 3345555667889999865 2222111111 11124567999887776655544434455543 333334
Q ss_pred eecCCCCeEEEEEcCCCc-EEEE-eCCCcEEEEeCC
Q psy3840 75 FSFHSAPALDVDWQSNTS-FASC-STDQHIHVCKLH 108 (131)
Q Consensus 75 ~~~~~~~v~~~~~~~~~~-~~~~-~~d~~i~i~d~~ 108 (131)
+. ..+.|.+.+|..||+ ++.+ +..=.-++||-.
T Consensus 152 i~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 152 IK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred cc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 43 457899999999976 5433 333456889854
No 409
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=93.27 E-value=1.3 Score=29.47 Aligned_cols=58 Identities=14% Similarity=0.188 Sum_probs=35.8
Q ss_pred EEEEcCC-CCceeecccccccEEEEEEcCCCC-EEEEE-eCCCcEEEEECCCcceeeeeecC
Q psy3840 20 ARIWTSD-GSLKSTLGQHKGPIFALKWNKRGN-YILSA-GVDKTTIIWDAASGQCEQQFSFH 78 (131)
Q Consensus 20 i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~s~-~~d~~i~~~d~~~~~~~~~~~~~ 78 (131)
|-++|+. ++.+.++.. ..++.++..+.+.+ +|+.. ..++.+.+||..+++.+..+..-
T Consensus 271 VWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~l 331 (342)
T PF06433_consen 271 VWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQL 331 (342)
T ss_dssp EEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---
T ss_pred EEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhcc
Confidence 4455655 445544442 34577888888655 55444 45789999999999998887753
No 410
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=93.26 E-value=0.32 Score=20.91 Aligned_cols=28 Identities=11% Similarity=0.056 Sum_probs=23.4
Q ss_pred cEEEEeCCCcEEEEeCCCCeeeEEEecc
Q psy3840 92 SFASCSTDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 92 ~~~~~~~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
.+..++.++.++-.|.++|+.+..++..
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~ 29 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQTG 29 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEESS
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeCC
Confidence 4556688999999999999999988643
No 411
>KOG2247|consensus
Probab=93.16 E-value=0.0047 Score=42.06 Aligned_cols=106 Identities=18% Similarity=0.276 Sum_probs=65.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEE-EEeCCCcEEEEECCCcceeeeeecCCCCe
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYIL-SAGVDKTTIIWDAASGQCEQQFSFHSAPA 82 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-s~~~d~~i~~~d~~~~~~~~~~~~~~~~v 82 (131)
|.+.+.-++.++.+..+..||-.++...... .++....++|+.++..++ .+...+.+.+||+.+......-.+-...-
T Consensus 42 w~~e~~nlavaca~tiv~~YD~agq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~ 120 (615)
T KOG2247|consen 42 WRPEGHNLAVACANTIVIYYDKAGQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSK 120 (615)
T ss_pred EecCCCceehhhhhhHHHhhhhhcceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchH
Confidence 5566666888888888888886655544332 345667788888776544 55678899999997643221111111111
Q ss_pred EEEEEcCCCc-EEEEeCCCcEEEEeCCCC
Q psy3840 83 LDVDWQSNTS-FASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 83 ~~~~~~~~~~-~~~~~~d~~i~i~d~~~~ 110 (131)
.-..|++... ++.+.-.+.+.+++..+.
T Consensus 121 sll~wsKg~~el~ig~~~gn~viynhgts 149 (615)
T KOG2247|consen 121 SLLAWSKGTPELVIGNNAGNIVIYNHGTS 149 (615)
T ss_pred HHHhhccCCccccccccccceEEEeccch
Confidence 2255666644 566666677777776544
No 412
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=93.02 E-value=2 Score=30.42 Aligned_cols=61 Identities=10% Similarity=0.143 Sum_probs=45.9
Q ss_pred CCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCC
Q psy3840 48 RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLH 108 (131)
Q Consensus 48 ~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~ 108 (131)
...+++.++..|-|++||--.......+++....|-.+..+.+|..+.+.....+.+-|++
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKNYLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecceEEEEecc
Confidence 4558999999999999996554444556777778888989999885555555677777764
No 413
>PHA02713 hypothetical protein; Provisional
Probab=92.82 E-value=2 Score=30.65 Aligned_cols=52 Identities=12% Similarity=0.073 Sum_probs=25.7
Q ss_pred CCCEEEEEeCCC-----eEEEEcCCCCceeecccccccEEEEE-EcCCCCEEEEEeCC
Q psy3840 7 NGSFLATGSYDG-----YARIWTSDGSLKSTLGQHKGPIFALK-WNKRGNYILSAGVD 58 (131)
Q Consensus 7 ~~~~l~~~~~d~-----~i~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~s~~~d 58 (131)
++.+.+.|+.++ .+..||........+.....+..... ..-++..++.|+.+
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g~IYviGG~~ 408 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGGRT 408 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECCEEEEEeCCC
Confidence 456667777653 37778876433333222221111111 12267777777654
No 414
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=92.61 E-value=3.2 Score=30.69 Aligned_cols=66 Identities=18% Similarity=0.250 Sum_probs=44.3
Q ss_pred ccCCCCEEEEEeCCCeEEEEcC-----C-----CCce---eec--------ccccccEEEEEEcCC---CCEEEEEeCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTS-----D-----GSLK---STL--------GQHKGPIFALKWNKR---GNYILSAGVDK 59 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~-----~-----~~~~---~~~--------~~~~~~i~~~~~~~~---~~~~~s~~~d~ 59 (131)
.+++|..++..+..|..-+.=. . |+.. +++ ......|..+.|+|. +..++.-..|+
T Consensus 92 ~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~vLtsdn 171 (717)
T PF10168_consen 92 LNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLVVLTSDN 171 (717)
T ss_pred ECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEEEEecCC
Confidence 5889999999888764333211 1 1110 000 123457889999994 57899999999
Q ss_pred cEEEEECCCc
Q psy3840 60 TTIIWDAASG 69 (131)
Q Consensus 60 ~i~~~d~~~~ 69 (131)
++++||+...
T Consensus 172 ~lR~y~~~~~ 181 (717)
T PF10168_consen 172 TLRLYDISDP 181 (717)
T ss_pred EEEEEecCCC
Confidence 9999999753
No 415
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=92.50 E-value=2.4 Score=28.96 Aligned_cols=67 Identities=13% Similarity=0.125 Sum_probs=41.5
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc-----eeeeeec--CCCCeEEEEEcCCCcEEEEeCCCcEEEE
Q psy3840 37 KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ-----CEQQFSF--HSAPALDVDWQSNTSFASCSTDQHIHVC 105 (131)
Q Consensus 37 ~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~-----~~~~~~~--~~~~v~~~~~~~~~~~~~~~~d~~i~i~ 105 (131)
...+..+.+.+++..++.+ ..|.+. +.-..++ ....... ....+.++.+.+++.++.++.+|.+...
T Consensus 280 ~~~l~~v~~~~dg~l~l~g-~~G~l~-~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s 353 (398)
T PLN00033 280 ARRIQNMGWRADGGLWLLT-RGGGLY-VSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGGSGILLRS 353 (398)
T ss_pred ccceeeeeEcCCCCEEEEe-CCceEE-EecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEECCCcEEEe
Confidence 3467889999998888766 445543 3333332 1222221 2235788999888887777777766554
No 416
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=92.43 E-value=1.9 Score=27.64 Aligned_cols=109 Identities=8% Similarity=0.079 Sum_probs=61.4
Q ss_pred CCCCEEEEEeCCC--eEEEEcCC-CCceeeccc-ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC
Q psy3840 6 NNGSFLATGSYDG--YARIWTSD-GSLKSTLGQ-HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP 81 (131)
Q Consensus 6 ~~~~~l~~~~~d~--~i~~~~~~-~~~~~~~~~-~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (131)
.++.++-+.+.-| .|+.+|+. ++......- ..-.-..+... +++.+.-.-.++...+||..+-+.+..+.-. ..
T Consensus 54 ~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~-~E 131 (264)
T PF05096_consen 54 DDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGFVYDPNTLKKIGTFPYP-GE 131 (264)
T ss_dssp ETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEE-S-SS
T ss_pred CCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEEEEccccceEEEEEecC-Cc
Confidence 3455555555555 58888877 443322211 11112223322 2334444456889999999998888887653 46
Q ss_pred eEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 82 ALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 82 v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
-+.++.. +..++..+....++++|.++.+...++.
T Consensus 132 GWGLt~d-g~~Li~SDGS~~L~~~dP~~f~~~~~i~ 166 (264)
T PF05096_consen 132 GWGLTSD-GKRLIMSDGSSRLYFLDPETFKEVRTIQ 166 (264)
T ss_dssp --EEEEC-SSCEEEE-SSSEEEEE-TTT-SEEEEEE
T ss_pred ceEEEcC-CCEEEEECCccceEEECCcccceEEEEE
Confidence 6777742 2347777778899999998876666553
No 417
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=92.28 E-value=2.2 Score=28.52 Aligned_cols=71 Identities=11% Similarity=0.003 Sum_probs=48.6
Q ss_pred CEEEEEeCCCcEEEEECCCcceeeeeecCC--CCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEEeccc
Q psy3840 50 NYILSAGVDKTTIIWDAASGQCEQQFSFHS--APALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120 (131)
Q Consensus 50 ~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~ 120 (131)
..+..+..+|.+.-.|..+++.+....... ..+..-....+|+++.++.++.++.+|.++|+.+.+.....
T Consensus 69 g~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~ 141 (370)
T COG1520 69 GTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGG 141 (370)
T ss_pred CeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEecCC
Confidence 345555788889889999888664433221 12222222337889999999999999998898888776554
No 418
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=92.21 E-value=2.5 Score=28.64 Aligned_cols=77 Identities=12% Similarity=0.104 Sum_probs=37.5
Q ss_pred EEcCCCCEEEE-EeCCC--cEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCCCCeeeEEEecc
Q psy3840 44 KWNKRGNYILS-AGVDK--TTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 44 ~~~~~~~~~~s-~~~d~--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
+|.++|+.++- +..+| .+.+.|+.+++..+.-.+..........+|+++ ++-...+..+.-.|+++.+.-..+..+
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p 121 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVP 121 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECC
Confidence 56778876554 44454 566778888876543322212222345567655 544455568888899988765555444
Q ss_pred c
Q psy3840 120 T 120 (131)
Q Consensus 120 ~ 120 (131)
.
T Consensus 122 ~ 122 (386)
T PF14583_consen 122 D 122 (386)
T ss_dssp T
T ss_pred c
Confidence 3
No 419
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=92.10 E-value=1.2 Score=31.42 Aligned_cols=60 Identities=20% Similarity=0.271 Sum_probs=44.7
Q ss_pred CCCEEEEEeCCCeEEEEcCCCCceee-cccccccEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy3840 7 NGSFLATGSYDGYARIWTSDGSLKST-LGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 67 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~ 67 (131)
...++++|+..|.|++||--|....+ +.+....|..+....+|..++..+.. .+.+-|++
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence 45789999999999999966554433 45666788899999999987766554 56666654
No 420
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=92.04 E-value=2.3 Score=27.80 Aligned_cols=97 Identities=12% Similarity=0.189 Sum_probs=58.5
Q ss_pred CCEEEEEeC----------CCeEEEEcCCCC-----ceeec--ccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc
Q psy3840 8 GSFLATGSY----------DGYARIWTSDGS-----LKSTL--GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ 70 (131)
Q Consensus 8 ~~~l~~~~~----------d~~i~~~~~~~~-----~~~~~--~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~ 70 (131)
.+++++|.. .|.|.++++... .+..+ ....++|.+++-- ++. ++.+ .++.+.+|++...+
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~-~g~~l~v~~l~~~~ 118 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NGR-LVVA-VGNKLYVYDLDNSK 118 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TTE-EEEE-ETTEEEEEEEETTS
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CCE-EEEe-ecCEEEEEEccCcc
Confidence 467777754 288999987642 23222 3356788888755 444 4433 34789999998777
Q ss_pred -eeeeeec-CCCCeEEEEEcCCCcEEEEeCCCcEEEEeCC
Q psy3840 71 -CEQQFSF-HSAPALDVDWQSNTSFASCSTDQHIHVCKLH 108 (131)
Q Consensus 71 -~~~~~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~ 108 (131)
....-.. ....+.++....+ .++.|+....+.++..+
T Consensus 119 ~l~~~~~~~~~~~i~sl~~~~~-~I~vgD~~~sv~~~~~~ 157 (321)
T PF03178_consen 119 TLLKKAFYDSPFYITSLSVFKN-YILVGDAMKSVSLLRYD 157 (321)
T ss_dssp SEEEEEEE-BSSSEEEEEEETT-EEEEEESSSSEEEEEEE
T ss_pred cchhhheecceEEEEEEecccc-EEEEEEcccCEEEEEEE
Confidence 3332221 2335666665533 67788877777777543
No 421
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=91.73 E-value=2.2 Score=27.02 Aligned_cols=93 Identities=15% Similarity=0.173 Sum_probs=53.9
Q ss_pred cccCCCCEEEEEeCCCeEEEEc--CCCCce-eecc-ccc-ccEEEEEEcCCCCEEEEEe---CCCcEEEEECC---Cc--
Q psy3840 3 SSRNNGSFLATGSYDGYARIWT--SDGSLK-STLG-QHK-GPIFALKWNKRGNYILSAG---VDKTTIIWDAA---SG-- 69 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~--~~~~~~-~~~~-~~~-~~i~~~~~~~~~~~~~s~~---~d~~i~~~d~~---~~-- 69 (131)
+|++++...+....+...+++. ..+... ..+. ... +.|..++++|||..++... .++.+.+--+. .+
T Consensus 72 S~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~ 151 (253)
T PF10647_consen 72 SWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVP 151 (253)
T ss_pred cccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCc
Confidence 5778877666666566666663 222211 1111 111 2899999999999877654 35667765443 22
Q ss_pred c----eeeeeecCCCCeEEEEEcCCCcEEE
Q psy3840 70 Q----CEQQFSFHSAPALDVDWQSNTSFAS 95 (131)
Q Consensus 70 ~----~~~~~~~~~~~v~~~~~~~~~~~~~ 95 (131)
. ...........+..+.|.+++.|+.
T Consensus 152 ~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V 181 (253)
T PF10647_consen 152 RRLTGPRRVAPPLLSDVTDVAWSDDSTLVV 181 (253)
T ss_pred ceeccceEecccccCcceeeeecCCCEEEE
Confidence 1 1111122345788999999988433
No 422
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.58 E-value=2.6 Score=27.49 Aligned_cols=76 Identities=9% Similarity=0.212 Sum_probs=54.8
Q ss_pred cccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCC-CCeEEEEEcCCCcEEEE-eCCCcEEEEeCCCC
Q psy3840 35 QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-APALDVDWQSNTSFASC-STDQHIHVCKLHSD 110 (131)
Q Consensus 35 ~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~-~~d~~i~i~d~~~~ 110 (131)
+-...+.++.|+|+.+.+++....+.-.++=-.+|+.+++++-.. .....+.|..+++++.+ -.++.++++.+...
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 444569999999999988888888877777777898888876322 23456777777775444 45677888776654
No 423
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=91.37 E-value=3.7 Score=28.76 Aligned_cols=113 Identities=14% Similarity=0.130 Sum_probs=57.1
Q ss_pred cCCCCEEEEEeCCCeEEEEcCCCCceeecccccc---cEEEEEEcCCCCEEEEEeC-------------CCcEEEEECCC
Q psy3840 5 RNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKG---PIFALKWNKRGNYILSAGV-------------DKTTIIWDAAS 68 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~s~~~-------------d~~i~~~d~~~ 68 (131)
-++|.+++... ..+..+|.-|+.+.....-.+ .=..+...|+|++++.+.. .-.|...| .+
T Consensus 156 l~nG~ll~~~~--~~~~e~D~~G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~t 232 (477)
T PF05935_consen 156 LPNGNLLIGSG--NRLYEIDLLGKVIWEYDLPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PT 232 (477)
T ss_dssp -TTS-EEEEEB--TEEEEE-TT--EEEEEE--TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TT
T ss_pred cCCCCEEEecC--CceEEEcCCCCEEEeeecCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CC
Confidence 45677776554 678888888876655432221 1245667788888776661 11244455 55
Q ss_pred cceeeeeec--C---------------------C----CCeEEEEEcC-CCcEEEEeC-CCcEEEEeCCCCeeeEEEecc
Q psy3840 69 GQCEQQFSF--H---------------------S----APALDVDWQS-NTSFASCST-DQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 69 ~~~~~~~~~--~---------------------~----~~v~~~~~~~-~~~~~~~~~-d~~i~i~d~~~~~~~~~~~~~ 119 (131)
|+.+..+.. + . ..+.++.+.+ ++.++..+. ...|...|.++++....+..+
T Consensus 233 G~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~ 312 (477)
T PF05935_consen 233 GEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPP 312 (477)
T ss_dssp S-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-S
T ss_pred CCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCC
Confidence 554443210 0 0 2378889988 456554444 458999998888888777655
Q ss_pred c
Q psy3840 120 T 120 (131)
Q Consensus 120 ~ 120 (131)
.
T Consensus 313 ~ 313 (477)
T PF05935_consen 313 G 313 (477)
T ss_dssp T
T ss_pred C
Confidence 3
No 424
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=91.29 E-value=1.7 Score=24.80 Aligned_cols=111 Identities=10% Similarity=-0.002 Sum_probs=67.9
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCCC---------ceeecccccccEEEEEE---cC-C-CCEEEEEeCCCcEEEEECCCc
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDGS---------LKSTLGQHKGPIFALKW---NK-R-GNYILSAGVDKTTIIWDAASG 69 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~~---------~~~~~~~~~~~i~~~~~---~~-~-~~~~~s~~~d~~i~~~d~~~~ 69 (131)
|.....-|++++.-+.|.+++.... .+. +..-...|++++- .| + ...|+.| ....+..||+.+.
T Consensus 6 fDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~-~LNin~~italaaG~l~~~~~~D~LliG-t~t~llaYDV~~N 83 (136)
T PF14781_consen 6 FDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDIS-FLNINQEITALAAGRLKPDDGRDCLLIG-TQTSLLAYDVENN 83 (136)
T ss_pred eCCCceeEEEEecCCEEEEECCCccccccccccCcee-EEECCCceEEEEEEecCCCCCcCEEEEe-ccceEEEEEcccC
Confidence 4455567888889999999986521 112 2223456667653 33 2 2344444 5557889999876
Q ss_pred ceeeeeecCCCCeEEEEEcC----CCcEEEEeCCCcEEEEeCCCCeeeEEEe
Q psy3840 70 QCEQQFSFHSAPALDVDWQS----NTSFASCSTDQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 70 ~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~d~~i~i~d~~~~~~~~~~~ 117 (131)
.-+..-. -...+.++.+-. +..++..+.+..|+-||..-.+...+..
T Consensus 84 ~d~Fyke-~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtVt 134 (136)
T PF14781_consen 84 SDLFYKE-VPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTVT 134 (136)
T ss_pred chhhhhh-CccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEec
Confidence 5443222 235677776622 2337777778889999887666666543
No 425
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=91.27 E-value=3.5 Score=28.84 Aligned_cols=106 Identities=13% Similarity=0.055 Sum_probs=60.4
Q ss_pred CCCEEEEEeCCCeEEEE-cCC---CCc---eeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCC
Q psy3840 7 NGSFLATGSYDGYARIW-TSD---GSL---KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS 79 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~-~~~---~~~---~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (131)
.|..+.+++.||-|.-| |.. +.. ++.++-...++..+.-..+.+.+++-+.+|++..+.....+.+-. ..-.
T Consensus 279 Gg~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~-~~~~ 357 (733)
T COG4590 279 GGFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLF-ERAY 357 (733)
T ss_pred CceeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceeh-hhhh
Confidence 35667888899999887 443 111 111222223333332222445677777888888776544443322 1122
Q ss_pred CCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeee
Q psy3840 80 APALDVDWQSNTSFASCSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 80 ~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~ 113 (131)
....-++++|.+..+..-..+.++++.+++..+.
T Consensus 358 ~~~~~~~~Sp~~~~Ll~e~~gki~~~~l~Nr~Pe 391 (733)
T COG4590 358 QAPQLVAMSPNQAYLLSEDQGKIRLAQLENRNPE 391 (733)
T ss_pred cCcceeeeCcccchheeecCCceEEEEecCCCCC
Confidence 3556688899866444456678999988765443
No 426
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.07 E-value=3 Score=27.23 Aligned_cols=105 Identities=9% Similarity=0.109 Sum_probs=67.3
Q ss_pred cccCCCCEEEEEeCCCeEEEE-cCCCCceeecc--cccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeee-----
Q psy3840 3 SSRNNGSFLATGSYDGYARIW-TSDGSLKSTLG--QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ----- 74 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~-~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~----- 74 (131)
.|+|+.+.|++..+...-.++ +.+|..+.+.. +.. ....+.+..+++++++-..++.+.++.+.....+..
T Consensus 92 Tynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~-DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~ 170 (316)
T COG3204 92 TYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFS-DPETIEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQK 170 (316)
T ss_pred eeCCCcceEEEecCCCceEEEEecCCceEEEecccccC-ChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEeccceE
Confidence 488988888887766654444 55677766543 222 234566777788888888899999887765422211
Q ss_pred -----eecCCCCeEEEEEcCCCc-EEEEeCCCcEEEEeCC
Q psy3840 75 -----FSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLH 108 (131)
Q Consensus 75 -----~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~i~d~~ 108 (131)
....+.....++|+|..+ +..+-...-+.||...
T Consensus 171 i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~ 210 (316)
T COG3204 171 IPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT 210 (316)
T ss_pred EeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence 112245678899999755 6666666656666544
No 427
>KOG4441|consensus
Probab=90.98 E-value=4.5 Score=29.08 Aligned_cols=104 Identities=11% Similarity=0.140 Sum_probs=56.9
Q ss_pred CCCEEEEEeCCCe-----EEEEcCCCCceeecccccccEEEEEEcC-CCCEEEEEeCCC------cEEEEECCCcc--ee
Q psy3840 7 NGSFLATGSYDGY-----ARIWTSDGSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDK------TTIIWDAASGQ--CE 72 (131)
Q Consensus 7 ~~~~l~~~~~d~~-----i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~------~i~~~d~~~~~--~~ 72 (131)
+|.+.++|+.||. +..||....................... ++...+.|+.++ ++..||..+++ .+
T Consensus 380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~ 459 (571)
T KOG4441|consen 380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLI 459 (571)
T ss_pred CCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeec
Confidence 5677888888874 6667766444433333333333333333 788888887554 45678877643 22
Q ss_pred eeeecCCCCeEEEEEcCCCcEEEEeCCC-----cEEEEeCCCCe
Q psy3840 73 QQFSFHSAPALDVDWQSNTSFASCSTDQ-----HIHVCKLHSDK 111 (131)
Q Consensus 73 ~~~~~~~~~v~~~~~~~~~~~~~~~~d~-----~i~i~d~~~~~ 111 (131)
..+...+.. ..++.-.+..++.|+.|+ .+..||.++.+
T Consensus 460 ~~M~~~R~~-~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~ 502 (571)
T KOG4441|consen 460 APMNTRRSG-FGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQ 502 (571)
T ss_pred CCccccccc-ceEEEECCEEEEECCccCCCccceEEEEcCCCCc
Confidence 223222221 123333333367777665 26778877654
No 428
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=90.82 E-value=5.2 Score=29.84 Aligned_cols=74 Identities=11% Similarity=0.136 Sum_probs=47.3
Q ss_pred ccEEEEEEcC-CCCEEEEEeCCCcEEEEECCCcc-----eeeeeecC----------CCCeEEEEEcCCCc-EEEEeCCC
Q psy3840 38 GPIFALKWNK-RGNYILSAGVDKTTIIWDAASGQ-----CEQQFSFH----------SAPALDVDWQSNTS-FASCSTDQ 100 (131)
Q Consensus 38 ~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~-----~~~~~~~~----------~~~v~~~~~~~~~~-~~~~~~d~ 100 (131)
.+...++|+| +...+|..+..|...+|++.... ........ ...-..+.|.++.. ++.+ ...
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~-~r~ 224 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVC-NRS 224 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEE-cCC
Confidence 3677899999 67799999999999999992211 11111011 12233778877744 5554 445
Q ss_pred cEEEEeCCCCee
Q psy3840 101 HIHVCKLHSDKP 112 (131)
Q Consensus 101 ~i~i~d~~~~~~ 112 (131)
.+.++|+++...
T Consensus 225 ~l~~~d~~~~~~ 236 (765)
T PF10214_consen 225 KLMLIDFESNWQ 236 (765)
T ss_pred ceEEEECCCCCc
Confidence 678888886644
No 429
>KOG3630|consensus
Probab=90.81 E-value=1.7 Score=33.59 Aligned_cols=81 Identities=16% Similarity=0.196 Sum_probs=50.9
Q ss_pred EEEEeCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeec----CCCCeEEE
Q psy3840 11 LATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF----HSAPALDV 85 (131)
Q Consensus 11 l~~~~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~----~~~~v~~~ 85 (131)
.++...|+.|++..+. ......-.......++++|+|.|.+++.|...|++.-|...- +....+.+ ....|.++
T Consensus 171 ~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~l-eik~~ip~Pp~~e~yrvl~v 249 (1405)
T KOG3630|consen 171 SAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSL-EIKSEIPEPPVEENYRVLSV 249 (1405)
T ss_pred hhhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeeccc-ceeecccCCCcCCCcceeEE
Confidence 3444556666666554 111111123445679999999999999999999998877542 22222221 14678899
Q ss_pred EEcCCCc
Q psy3840 86 DWQSNTS 92 (131)
Q Consensus 86 ~~~~~~~ 92 (131)
.|-....
T Consensus 250 ~Wl~t~e 256 (1405)
T KOG3630|consen 250 TWLSTQE 256 (1405)
T ss_pred EEeccee
Confidence 9976644
No 430
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.40 E-value=3.6 Score=26.95 Aligned_cols=49 Identities=20% Similarity=0.304 Sum_probs=38.5
Q ss_pred EEcCCCCEEEEEeCC-----CcEEEEECCCc-ceeeeeecCCCCeEEEEEcCCCc
Q psy3840 44 KWNKRGNYILSAGVD-----KTTIIWDAASG-QCEQQFSFHSAPALDVDWQSNTS 92 (131)
Q Consensus 44 ~~~~~~~~~~s~~~d-----~~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~ 92 (131)
.|+|+|.++.....| |.|-+||.+.+ ..+..+..+.-....+.+.+||+
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGr 174 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGR 174 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCc
Confidence 689999998876543 66889999864 45567777777788899999988
No 431
>PHA03098 kelch-like protein; Provisional
Probab=90.15 E-value=5 Score=28.31 Aligned_cols=102 Identities=10% Similarity=0.070 Sum_probs=47.0
Q ss_pred CCCEEEEEeCCC-----eEEEEcCCCCceeecccccccE--EEEEEcCCCCEEEEEeCC------CcEEEEECCCcc--e
Q psy3840 7 NGSFLATGSYDG-----YARIWTSDGSLKSTLGQHKGPI--FALKWNKRGNYILSAGVD------KTTIIWDAASGQ--C 71 (131)
Q Consensus 7 ~~~~l~~~~~d~-----~i~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~s~~~d------~~i~~~d~~~~~--~ 71 (131)
++..++.|+.++ .+..||..............+. .+++ .-++..++.|+.+ ..+..||+.+.+ .
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~ 420 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSK 420 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeee
Confidence 455666676542 3666776533332222111111 1111 2256666666632 357788877542 2
Q ss_pred eeeeecCCCCeEEEEEcCCCc-EEEEeCC--------CcEEEEeCCCCe
Q psy3840 72 EQQFSFHSAPALDVDWQSNTS-FASCSTD--------QHIHVCKLHSDK 111 (131)
Q Consensus 72 ~~~~~~~~~~v~~~~~~~~~~-~~~~~~d--------~~i~i~d~~~~~ 111 (131)
+..++...... ++.. .+++ ++.|+.+ ..+.+||..+.+
T Consensus 421 ~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 467 (534)
T PHA03098 421 GSPLPISHYGG-CAIY-HDGKIYVIGGISYIDNIKVYNIVESYNPVTNK 467 (534)
T ss_pred cCCCCccccCc-eEEE-ECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence 22222111111 2222 2445 5556542 237888887653
No 432
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=90.09 E-value=4.8 Score=27.93 Aligned_cols=113 Identities=11% Similarity=0.125 Sum_probs=53.7
Q ss_pred CCCEEEEEe-CCCeEEEEcCCC-----Cceeeccc---cc----ccEEEEEEcCCCCEEEEEe------CCCcEEEEECC
Q psy3840 7 NGSFLATGS-YDGYARIWTSDG-----SLKSTLGQ---HK----GPIFALKWNKRGNYILSAG------VDKTTIIWDAA 67 (131)
Q Consensus 7 ~~~~l~~~~-~d~~i~~~~~~~-----~~~~~~~~---~~----~~i~~~~~~~~~~~~~s~~------~d~~i~~~d~~ 67 (131)
+.++|+..+ .++.|.+.|+.. +..+.+.. +. ..-..+..-|+|..++|+- ..|.+.+.|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 455666655 688999999861 11122221 11 2223445567898888752 23457778877
Q ss_pred CcceeeeeecCCC---CeEEEEEcCCCc-EEEEe--------------------CCCcEEEEeCCCCeeeEEEecc
Q psy3840 68 SGQCEQQFSFHSA---PALDVDWQSNTS-FASCS--------------------TDQHIHVCKLHSDKPVKSFEGH 119 (131)
Q Consensus 68 ~~~~~~~~~~~~~---~v~~~~~~~~~~-~~~~~--------------------~d~~i~i~d~~~~~~~~~~~~~ 119 (131)
+.+....+..... --..+.|.|... +++.. ....+.+||+++.+.++++..-
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg 241 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLG 241 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecC
Confidence 7766666554322 234566677644 44432 2467999999999999888643
No 433
>KOG3616|consensus
Probab=90.05 E-value=1.6 Score=32.36 Aligned_cols=67 Identities=12% Similarity=0.189 Sum_probs=41.2
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCcEEEEeCCCcEEEEe
Q psy3840 38 GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCK 106 (131)
Q Consensus 38 ~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d 106 (131)
..+.++.-+|.++.++++..||++.+|+........... ...+-..+.|...| +++...|+.+.-|.
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~-~~~p~~nlv~tnhg-l~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICE-EAKPKENLVFTNHG-LVTATSDRRALAWK 81 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhh-hcCCccceeeeccc-eEEEeccchhheee
Confidence 456777878999999999999999999976543322221 11222334443333 55555555555553
No 434
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=89.95 E-value=4.3 Score=27.24 Aligned_cols=90 Identities=12% Similarity=0.143 Sum_probs=45.4
Q ss_pred cccCCCCEEEEEe-----------CCC-eEEEEc-CC--CCc--eeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy3840 3 SSRNNGSFLATGS-----------YDG-YARIWT-SD--GSL--KSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65 (131)
Q Consensus 3 ~~~~~~~~l~~~~-----------~d~-~i~~~~-~~--~~~--~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d 65 (131)
+|.++|+++++-. ..+ .|.+++ .. |+. ...+.........+++.+++ .++ +......++.|
T Consensus 20 a~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~~i~~~~d 97 (367)
T TIGR02604 20 CFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPPDILFLRD 97 (367)
T ss_pred eECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCCeEEEEeC
Confidence 4677788776643 223 666654 32 322 22222223345788888888 444 44443333434
Q ss_pred CCC-c----c--ee-eeeecC----CCCeEEEEEcCCCcEE
Q psy3840 66 AAS-G----Q--CE-QQFSFH----SAPALDVDWQSNTSFA 94 (131)
Q Consensus 66 ~~~-~----~--~~-~~~~~~----~~~v~~~~~~~~~~~~ 94 (131)
... + + .+ ..+... ......+.|.|++.|.
T Consensus 98 ~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LY 138 (367)
T TIGR02604 98 KDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLY 138 (367)
T ss_pred CCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEE
Confidence 421 1 1 11 112221 2346788999998843
No 435
>KOG4460|consensus
Probab=89.87 E-value=5.6 Score=28.39 Aligned_cols=75 Identities=11% Similarity=0.228 Sum_probs=49.2
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEEC---------CCcceeeee---------ec--CCCCeEEEEEcCCC----cEE
Q psy3840 39 PIFALKWNKRGNYILSAGVDKTTIIWDA---------ASGQCEQQF---------SF--HSAPALDVDWQSNT----SFA 94 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~---------~~~~~~~~~---------~~--~~~~v~~~~~~~~~----~~~ 94 (131)
.|..+..++.|..++-.+.+|.+.++-. +.|+..... .. ..-.+...+|+|+. .+.
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 3566778899999999888887654332 223322111 11 12245677899964 477
Q ss_pred EEeCCCcEEEEeCCCCeee
Q psy3840 95 SCSTDQHIHVCKLHSDKPV 113 (131)
Q Consensus 95 ~~~~d~~i~i~d~~~~~~~ 113 (131)
.-..|+.+++||+.....+
T Consensus 185 iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 185 LLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred EEecCcEEEEEecCCcchh
Confidence 7889999999999866554
No 436
>PRK13684 Ycf48-like protein; Provisional
Probab=89.85 E-value=4.2 Score=26.97 Aligned_cols=97 Identities=10% Similarity=0.130 Sum_probs=51.3
Q ss_pred cCCCCEEEEEeCCCeEE-EEcCCCCceeec-ccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeec----C
Q psy3840 5 RNNGSFLATGSYDGYAR-IWTSDGSLKSTL-GQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF----H 78 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~-~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~----~ 78 (131)
.+++.+++++ ..|.+. .++-.++..... ..-...+..+.+.++++.++.+ ..|.+++=....+..-..... .
T Consensus 181 ~~~g~~v~~g-~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~ 258 (334)
T PRK13684 181 SPDGKYVAVS-SRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSKPIIPEITN 258 (334)
T ss_pred CCCCeEEEEe-CCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccccccCCcccc
Confidence 3555555554 345433 222222222222 2233567888999988877765 456654322333332221111 1
Q ss_pred CCCeEEEEEcCCCcEEEEeCCCcEE
Q psy3840 79 SAPALDVDWQSNTSFASCSTDQHIH 103 (131)
Q Consensus 79 ~~~v~~~~~~~~~~~~~~~~d~~i~ 103 (131)
...+..+.+.|++.+..++.+|.+.
T Consensus 259 ~~~l~~v~~~~~~~~~~~G~~G~v~ 283 (334)
T PRK13684 259 GYGYLDLAYRTPGEIWAGGGNGTLL 283 (334)
T ss_pred ccceeeEEEcCCCCEEEEcCCCeEE
Confidence 2356788888887766666777654
No 437
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=89.58 E-value=1.9 Score=22.69 Aligned_cols=42 Identities=10% Similarity=-0.027 Sum_probs=24.5
Q ss_pred CCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeC
Q psy3840 16 YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGV 57 (131)
Q Consensus 16 ~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~ 57 (131)
.+|.+.-||...+....+...-.....+++++++..++.+..
T Consensus 35 ~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et 76 (89)
T PF03088_consen 35 PTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAET 76 (89)
T ss_dssp --EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEG
T ss_pred CCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEec
Confidence 345566666665555444444445678888998887766643
No 438
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=89.49 E-value=7.7 Score=29.48 Aligned_cols=74 Identities=8% Similarity=0.089 Sum_probs=47.6
Q ss_pred CCeEEEEcCCCCceeec-ccccccEEEEEEcCCCCEEEE-EeCCC-----cEEEEECCC-cceeeeeecCCCCeEEEEEc
Q psy3840 17 DGYARIWTSDGSLKSTL-GQHKGPIFALKWNKRGNYILS-AGVDK-----TTIIWDAAS-GQCEQQFSFHSAPALDVDWQ 88 (131)
Q Consensus 17 d~~i~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~s-~~~d~-----~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~ 88 (131)
.+.+.+-|..|.....+ ..+..++..-+|+|+|+.++- .+.++ .|++-|+.+ +..+..+......|..-...
T Consensus 328 ~~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~ 407 (912)
T TIGR02171 328 TGNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVL 407 (912)
T ss_pred CCeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEec
Confidence 45777778776555545 556788999999999999887 43333 488888875 33334444444444444444
Q ss_pred CC
Q psy3840 89 SN 90 (131)
Q Consensus 89 ~~ 90 (131)
++
T Consensus 408 e~ 409 (912)
T TIGR02171 408 EN 409 (912)
T ss_pred CC
Confidence 43
No 439
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=89.44 E-value=4.4 Score=26.54 Aligned_cols=68 Identities=19% Similarity=0.331 Sum_probs=45.0
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC-----eEEEEEcCCCcEE-EEeCCCcEEEEeC
Q psy3840 40 IFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP-----ALDVDWQSNTSFA-SCSTDQHIHVCKL 107 (131)
Q Consensus 40 i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~-~~~~d~~i~i~d~ 107 (131)
+.++...++|.+|+|.-.-..|.+.|.++++.+..+.+.... -...++..+-+++ .+..++.|.++|=
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN 219 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN 219 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence 566777788999999988889999999999988888655211 1113333333332 2345566777765
No 440
>KOG2377|consensus
Probab=89.29 E-value=5.8 Score=27.81 Aligned_cols=87 Identities=7% Similarity=-0.023 Sum_probs=55.7
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCCCce-----eecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC-cceeeeeec
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDGSLK-----STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS-GQCEQQFSF 77 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~-~~~~~~~~~ 77 (131)
|++|++.+|+--.+.+|.+++..+... .+.+..+..|....|..+... +-....| +-+|.+.. ...++....
T Consensus 74 FSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e~-A~i~~~G-~e~y~v~pekrslRlVks 151 (657)
T KOG2377|consen 74 FSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEI-AFITDQG-IEFYQVLPEKRSLRLVKS 151 (657)
T ss_pred eccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCeeE-EEEecCC-eEEEEEchhhhhhhhhhh
Confidence 799999999988899999999753221 222333455778888766443 3333333 55555443 233444455
Q ss_pred CCCCeEEEEEcCCCc
Q psy3840 78 HSAPALDVDWQSNTS 92 (131)
Q Consensus 78 ~~~~v~~~~~~~~~~ 92 (131)
+...|.-..|+++..
T Consensus 152 ~~~nvnWy~yc~et~ 166 (657)
T KOG2377|consen 152 HNLNVNWYMYCPETA 166 (657)
T ss_pred cccCccEEEEccccc
Confidence 677888889999866
No 441
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=88.61 E-value=4.2 Score=25.26 Aligned_cols=99 Identities=12% Similarity=0.205 Sum_probs=59.6
Q ss_pred CEEEEEeCCCeEEEEcCC--C-CceeecccccccEEEEEEcCCCCEEEEEeCC---C---cEEE---EECC--Ccceee-
Q psy3840 9 SFLATGSYDGYARIWTSD--G-SLKSTLGQHKGPIFALKWNKRGNYILSAGVD---K---TTII---WDAA--SGQCEQ- 73 (131)
Q Consensus 9 ~~l~~~~~d~~i~~~~~~--~-~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d---~---~i~~---~d~~--~~~~~~- 73 (131)
+.|+.+.....|.+|++. . +...++. --+.|..+.++..|.++++--.+ . .+++ |+.. ...++.
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v 107 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV 107 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence 566555667789999987 2 2333333 34789999999999999987543 2 3454 3332 111111
Q ss_pred eeec---------------------CCCCeEEEEEcCC-CcEEEEeCCCcEEEEeCCC
Q psy3840 74 QFSF---------------------HSAPALDVDWQSN-TSFASCSTDQHIHVCKLHS 109 (131)
Q Consensus 74 ~~~~---------------------~~~~v~~~~~~~~-~~~~~~~~d~~i~i~d~~~ 109 (131)
.+-+ -..++.+++.+|- |.++.|+. +.+.+|.++.
T Consensus 108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~-~~l~lf~l~~ 164 (215)
T PF14761_consen 108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCG-NKLVLFTLKY 164 (215)
T ss_pred EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcC-CEEEEEEEEE
Confidence 1111 1345677888775 66766654 5677887653
No 442
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=88.41 E-value=7.7 Score=28.06 Aligned_cols=65 Identities=18% Similarity=0.202 Sum_probs=42.5
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC--CCceeecccccccEEEEEEcCCCCEEEEEeCC-CcEEEEECCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD--GSLKSTLGQHKGPIFALKWNKRGNYILSAGVD-KTTIIWDAAS 68 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d-~~i~~~d~~~ 68 (131)
|+|....|++-.....=-++++. +..++.-..-.+.|.|.+|.+||+.++.+-.. =.-++||-..
T Consensus 120 WHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 120 WHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred ccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 78888888776554332345554 44444333556789999999999987776443 3456888543
No 443
>KOG3616|consensus
Probab=88.12 E-value=2.1 Score=31.84 Aligned_cols=59 Identities=15% Similarity=0.272 Sum_probs=34.8
Q ss_pred cCCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy3840 5 RNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65 (131)
Q Consensus 5 ~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d 65 (131)
+|.++.++.+..||.|++|+...+....+-....|-..+.|.. ..+++...|+.+.-|.
T Consensus 23 hp~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tn--hgl~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 23 HPGGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTN--HGLVTATSDRRALAWK 81 (1636)
T ss_pred cCCCceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeec--cceEEEeccchhheee
Confidence 5889999999999999999965322211111112223333432 2355666666666665
No 444
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=87.52 E-value=7.1 Score=26.63 Aligned_cols=85 Identities=12% Similarity=0.019 Sum_probs=43.0
Q ss_pred cccCCCCEEEEEeC-CCe--EEEEcCCCCceeecccccc-cEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC
Q psy3840 3 SSRNNGSFLATGSY-DGY--ARIWTSDGSLKSTLGQHKG-PIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH 78 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~--i~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 78 (131)
.|.++|++|+-++. +|. +.+.|+....+..+....+ ......++|+.+.++-......++-.|+.+.+....+...
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p 121 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVP 121 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECC
Confidence 57888977766555 665 4455666555555544332 2224556788887766656678888899988765555443
Q ss_pred CCCeEEEEE
Q psy3840 79 SAPALDVDW 87 (131)
Q Consensus 79 ~~~v~~~~~ 87 (131)
..-.-...|
T Consensus 122 ~~~~g~gt~ 130 (386)
T PF14583_consen 122 DDWKGYGTW 130 (386)
T ss_dssp TTEEEEEEE
T ss_pred cccccccce
Confidence 333333444
No 445
>KOG4441|consensus
Probab=87.48 E-value=8.8 Score=27.68 Aligned_cols=102 Identities=11% Similarity=0.132 Sum_probs=53.2
Q ss_pred CCCEEEEEeCC-C-----eEEEEcCCCCceeecccccccEEEEEEcC-CCCEEEEEeCCCc-----EEEEECCCcc--ee
Q psy3840 7 NGSFLATGSYD-G-----YARIWTSDGSLKSTLGQHKGPIFALKWNK-RGNYILSAGVDKT-----TIIWDAASGQ--CE 72 (131)
Q Consensus 7 ~~~~l~~~~~d-~-----~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~-----i~~~d~~~~~--~~ 72 (131)
++...++|+.| | ++..||..............+-....... +|...++|+.||. +..||..+.+ .+
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~v 411 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPV 411 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCccccc
Confidence 45677888888 3 46677776444333333332223333333 7888899988864 5567766532 22
Q ss_pred eeeecCCCCeEEEEEcCCCc-EEEEeCC------CcEEEEeCCCC
Q psy3840 73 QQFSFHSAPALDVDWQSNTS-FASCSTD------QHIHVCKLHSD 110 (131)
Q Consensus 73 ~~~~~~~~~v~~~~~~~~~~-~~~~~~d------~~i~i~d~~~~ 110 (131)
..+.......-.. .-+++ +++|+.+ ..+..||..+.
T Consensus 412 a~m~~~r~~~gv~--~~~g~iYi~GG~~~~~~~l~sve~YDP~t~ 454 (571)
T KOG4441|consen 412 APMLTRRSGHGVA--VLGGKLYIIGGGDGSSNCLNSVECYDPETN 454 (571)
T ss_pred CCCCcceeeeEEE--EECCEEEEEcCcCCCccccceEEEEcCCCC
Confidence 2222111111111 12455 5666644 34677877664
No 446
>KOG2280|consensus
Probab=87.03 E-value=8.7 Score=28.58 Aligned_cols=49 Identities=18% Similarity=0.418 Sum_probs=36.2
Q ss_pred eEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy3840 19 YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 68 (131)
Q Consensus 19 ~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 68 (131)
.|++|+..|..+.++.-..+.+-.+-|+.+..+ +....+|++++|++..
T Consensus 65 ~I~If~~sG~lL~~~~w~~~~lI~mgWs~~eeL-I~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 65 YIRIFNISGQLLGRILWKHGELIGMGWSDDEEL-ICVQKDGTVHVYGLLG 113 (829)
T ss_pred eEEEEeccccchHHHHhcCCCeeeecccCCceE-EEEeccceEEEeecch
Confidence 377888888777665444457889999876654 5556999999999753
No 447
>PHA03098 kelch-like protein; Provisional
Probab=87.02 E-value=8.7 Score=27.16 Aligned_cols=103 Identities=10% Similarity=0.050 Sum_probs=47.9
Q ss_pred CCCEEEEEeCC------CeEEEEcCCCCceeecccccccE--EEEEEcCCCCEEEEEeCCC--------cEEEEECCCcc
Q psy3840 7 NGSFLATGSYD------GYARIWTSDGSLKSTLGQHKGPI--FALKWNKRGNYILSAGVDK--------TTIIWDAASGQ 70 (131)
Q Consensus 7 ~~~~l~~~~~d------~~i~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~s~~~d~--------~i~~~d~~~~~ 70 (131)
++.+.+.|+.+ ..+..||..............+. .++ ...++..++.|+.+. .+..||..+++
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~ 467 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCA-IYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK 467 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceE-EEECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence 34555666531 34677776533322222111110 111 122556666665421 27788887643
Q ss_pred --eeeeeecCCCCeEEEEEcCCCc-EEEEeCC-----CcEEEEeCCCCee
Q psy3840 71 --CEQQFSFHSAPALDVDWQSNTS-FASCSTD-----QHIHVCKLHSDKP 112 (131)
Q Consensus 71 --~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d-----~~i~i~d~~~~~~ 112 (131)
.+..+.........+.. +++ ++.|+.+ +.+.+||..+.+-
T Consensus 468 W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 515 (534)
T PHA03098 468 WTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTNTW 515 (534)
T ss_pred eeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCCEE
Confidence 22222211111112222 555 5666543 4688999887653
No 448
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=86.99 E-value=6.8 Score=25.90 Aligned_cols=77 Identities=18% Similarity=0.226 Sum_probs=53.1
Q ss_pred EEeCCCeEEEEcCCCCceeeccc--ccccEEEEEEcC------CCCEEEEEeCCCcEEEEECCCcceeeeeecCC-----
Q psy3840 13 TGSYDGYARIWTSDGSLKSTLGQ--HKGPIFALKWNK------RGNYILSAGVDKTTIIWDAASGQCEQQFSFHS----- 79 (131)
Q Consensus 13 ~~~~d~~i~~~~~~~~~~~~~~~--~~~~i~~~~~~~------~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~----- 79 (131)
.|.--|.|-+||..|..++++.. .-..-+.|+..| .+.+|+---.||+|..||..+++.+..+....
T Consensus 217 ~G~G~G~VdvFd~~G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~ 296 (336)
T TIGR03118 217 AGAGLGYVNVFTLNGQLLRRVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVK 296 (336)
T ss_pred cCCCcceEEEEcCCCcEEEEeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEE
Confidence 33445789999999988887632 233456777755 45666666679999999999988776665432
Q ss_pred -CCeEEEEEcC
Q psy3840 80 -APALDVDWQS 89 (131)
Q Consensus 80 -~~v~~~~~~~ 89 (131)
...+.+.|..
T Consensus 297 i~GLWgL~fGn 307 (336)
T TIGR03118 297 VDGLWSLTFGN 307 (336)
T ss_pred ecCeEEeeeCC
Confidence 2356677744
No 449
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=86.11 E-value=5.2 Score=23.74 Aligned_cols=29 Identities=7% Similarity=0.273 Sum_probs=23.2
Q ss_pred CCeEEEEEcCC-----Cc--EEEEeCCCcEEEEeCC
Q psy3840 80 APALDVDWQSN-----TS--FASCSTDQHIHVCKLH 108 (131)
Q Consensus 80 ~~v~~~~~~~~-----~~--~~~~~~d~~i~i~d~~ 108 (131)
..+..++|+|. ++ |++.+.++.+.+|...
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 37889999983 23 6788899999999866
No 450
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=86.02 E-value=13 Score=28.02 Aligned_cols=69 Identities=16% Similarity=0.212 Sum_probs=48.0
Q ss_pred CCEEEEEeCCCcEEEEECCCcceeeeeecCCCC--------eEEEEEc-----------------CCCcEEEEeCCCcEE
Q psy3840 49 GNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP--------ALDVDWQ-----------------SNTSFASCSTDQHIH 103 (131)
Q Consensus 49 ~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~--------v~~~~~~-----------------~~~~~~~~~~d~~i~ 103 (131)
+..++.++.++.+.-.|..+|+.+..+...... ...+.+. .+++++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 556777778889999999999988776532210 1122221 123577888899999
Q ss_pred EEeCCCCeeeEEEe
Q psy3840 104 VCKLHSDKPVKSFE 117 (131)
Q Consensus 104 i~d~~~~~~~~~~~ 117 (131)
-.|.++|+.+..+.
T Consensus 274 ALDA~TGk~~W~fg 287 (764)
T TIGR03074 274 ALDADTGKLCEDFG 287 (764)
T ss_pred EEECCCCCEEEEec
Confidence 99999999887653
No 451
>PRK10115 protease 2; Provisional
Probab=85.27 E-value=13 Score=27.52 Aligned_cols=70 Identities=6% Similarity=0.011 Sum_probs=43.2
Q ss_pred cEEEEEEcCCCCEEEEEeC-C----CcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-E-EEEeCC-----CcEEEEe
Q psy3840 39 PIFALKWNKRGNYILSAGV-D----KTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-F-ASCSTD-----QHIHVCK 106 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~-d----~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~-~~~~~d-----~~i~i~d 106 (131)
.+..+.++|++++++.+.. + ..+++.|+.+++.+...... .. ..+.|.+++. + ++...+ ..|+.++
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~-~~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~ 205 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN-VE-PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT 205 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC-cc-eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence 4566788999998775432 2 35778899887643221111 11 4589998865 4 333322 3677888
Q ss_pred CCCC
Q psy3840 107 LHSD 110 (131)
Q Consensus 107 ~~~~ 110 (131)
+.++
T Consensus 206 lgt~ 209 (686)
T PRK10115 206 IGTP 209 (686)
T ss_pred CCCC
Confidence 8777
No 452
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=85.10 E-value=9.3 Score=25.70 Aligned_cols=58 Identities=12% Similarity=0.196 Sum_probs=33.2
Q ss_pred cEEEEEEcCCCCEEEEEeCC-------------------CcEEEEECCCcceeeeeecCCCCeEEEEEcCCCcEEEEe
Q psy3840 39 PIFALKWNKRGNYILSAGVD-------------------KTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCS 97 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~d-------------------~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 97 (131)
....++|.|+|.+.++-+.. +.+.-++...++. ..+.........++|++++.+....
T Consensus 125 ~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~-e~~a~G~rnp~Gl~~d~~G~l~~td 201 (367)
T TIGR02604 125 SLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKL-RVVAHGFQNPYGHSVDSWGDVFFCD 201 (367)
T ss_pred cccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeE-EEEecCcCCCccceECCCCCEEEEc
Confidence 36688999999877765521 2344444443332 2232222335678899888754443
No 453
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=84.28 E-value=2.3 Score=18.05 Aligned_cols=27 Identities=4% Similarity=0.198 Sum_probs=16.6
Q ss_pred CCCeEEEEEcCCCc-E-EEEeCC--CcEEEE
Q psy3840 79 SAPALDVDWQSNTS-F-ASCSTD--QHIHVC 105 (131)
Q Consensus 79 ~~~v~~~~~~~~~~-~-~~~~~d--~~i~i~ 105 (131)
........|+|||+ + .++..+ +...||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 44567789999987 4 445555 555555
No 454
>KOG4460|consensus
Probab=84.21 E-value=13 Score=26.69 Aligned_cols=69 Identities=12% Similarity=0.079 Sum_probs=44.2
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCC----------CCceeecc---------cc--cccEEEEEEcCC---CCEEEEEeCCC
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSD----------GSLKSTLG---------QH--KGPIFALKWNKR---GNYILSAGVDK 59 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~----------~~~~~~~~---------~~--~~~i~~~~~~~~---~~~~~s~~~d~ 59 (131)
.++.|..++-.+.+|.+-++-.. |+.+.... .. .-.+...+|+|+ ...+..-..|.
T Consensus 111 ~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sdn 190 (741)
T KOG4460|consen 111 LSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSDN 190 (741)
T ss_pred ecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEEEEecCc
Confidence 47788889888889976554311 32221111 01 113456789995 46788888999
Q ss_pred cEEEEECCCccee
Q psy3840 60 TTIIWDAASGQCE 72 (131)
Q Consensus 60 ~i~~~d~~~~~~~ 72 (131)
.+++||+.+...+
T Consensus 191 viRiy~lS~~tel 203 (741)
T KOG4460|consen 191 VIRIYSLSEPTEL 203 (741)
T ss_pred EEEEEecCCcchh
Confidence 9999998765433
No 455
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=84.02 E-value=5.3 Score=26.47 Aligned_cols=56 Identities=16% Similarity=0.121 Sum_probs=34.0
Q ss_pred CCCEEEEEeCCCeEEEEcCC-CCce----eecccccccEEEEEEcCCCCEEEEEeCCCcEE
Q psy3840 7 NGSFLATGSYDGYARIWTSD-GSLK----STLGQHKGPIFALKWNKRGNYILSAGVDKTTI 62 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~-~~~~----~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~ 62 (131)
.+.++++.-..+.|....+. +..+ ..+......+..+++.|+|.++++.+.+|.|+
T Consensus 270 ~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 270 RGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred cCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 34555555545566665554 2111 12233444789999999999999888888774
No 456
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=82.41 E-value=2.4 Score=16.94 Aligned_cols=22 Identities=27% Similarity=0.542 Sum_probs=15.8
Q ss_pred cccCCCCEEEEEeCCCeEEEEc
Q psy3840 3 SSRNNGSFLATGSYDGYARIWT 24 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~ 24 (131)
+......+++++...+-+|+|+
T Consensus 6 aia~g~~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 6 AIAAGDSWVAVATSAGYLRIFS 27 (27)
T ss_pred EEEccCCEEEEEeCCCeEEecC
Confidence 3444567888888888888874
No 457
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=82.12 E-value=3.1 Score=17.87 Aligned_cols=20 Identities=5% Similarity=-0.022 Sum_probs=15.2
Q ss_pred CCcEEEEeCCCcEEEEeCCC
Q psy3840 90 NTSFASCSTDQHIHVCKLHS 109 (131)
Q Consensus 90 ~~~~~~~~~d~~i~i~d~~~ 109 (131)
++.++.++.|+.++.+|.++
T Consensus 21 ~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 21 GGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp TSEEEEE-TTSEEEEEETT-
T ss_pred CCEEEEEcCCCEEEEEeCCC
Confidence 56788888999999998764
No 458
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=81.85 E-value=14 Score=25.27 Aligned_cols=120 Identities=11% Similarity=0.124 Sum_probs=62.8
Q ss_pred CCCCEEEEEeCCCeEEEEcCCCCceeecccccccEEEEEEc----CCCCE--E-EEEeCC---CcEEEEECC--Ccceee
Q psy3840 6 NNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWN----KRGNY--I-LSAGVD---KTTIIWDAA--SGQCEQ 73 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~--~-~s~~~d---~~i~~~d~~--~~~~~~ 73 (131)
|...+++....++-+.+||+.|+.+..+.. +....+... -.++. + +....+ .+|++|.+. ++. +.
T Consensus 66 p~kSlIigTdK~~GL~VYdL~Gk~lq~~~~--Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~-L~ 142 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLDGKELQSLPV--GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGE-LT 142 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETTS-EEEEE-S--S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTE-EE
T ss_pred cccceEEEEeCCCCEEEEcCCCcEEEeecC--CCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCc-ce
Confidence 455677777788889999999998877642 233333321 13432 3 333333 468888765 332 22
Q ss_pred eee-------cCCCCeEEEEE--cC-CCc--EEEEeCCCcEEEEeCC---CC----eeeEEEecccceEEEEee
Q psy3840 74 QFS-------FHSAPALDVDW--QS-NTS--FASCSTDQHIHVCKLH---SD----KPVKSFEGHTRVYYLAMD 128 (131)
Q Consensus 74 ~~~-------~~~~~v~~~~~--~~-~~~--~~~~~~d~~i~i~d~~---~~----~~~~~~~~~~~~~~~~~~ 128 (131)
.+. .....++.++. ++ ++. .+....+|.+..|.+. .+ +.++++....+.-.++.|
T Consensus 143 ~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVD 216 (381)
T PF02333_consen 143 DVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVD 216 (381)
T ss_dssp E-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEE
T ss_pred EcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEe
Confidence 222 11233555654 44 354 4556778888877764 23 467777765555555544
No 459
>PHA02790 Kelch-like protein; Provisional
Probab=81.64 E-value=16 Score=25.72 Aligned_cols=100 Identities=7% Similarity=-0.039 Sum_probs=44.5
Q ss_pred CCCEEEEEeCCC---eEEEEcCCCCceeecccccccEEE-EEEcCCCCEEEEEeCCCcEEEEECCCcc--eeeeeecCCC
Q psy3840 7 NGSFLATGSYDG---YARIWTSDGSLKSTLGQHKGPIFA-LKWNKRGNYILSAGVDKTTIIWDAASGQ--CEQQFSFHSA 80 (131)
Q Consensus 7 ~~~~l~~~~~d~---~i~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~s~~~d~~i~~~d~~~~~--~~~~~~~~~~ 80 (131)
++.+.+.|+.++ .+..||..............+... ....-++..++.|+ ....||..+++ .+..+.....
T Consensus 362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r~ 438 (480)
T PHA02790 362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYPRD 438 (480)
T ss_pred CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEECC---ceEEecCCCCcEeEcCCCCCCcc
Confidence 455556666443 355677653332222111111111 11123556666653 46678876532 2222222222
Q ss_pred CeEEEEEcCCCc-EEEEeCC-----CcEEEEeCCCCe
Q psy3840 81 PALDVDWQSNTS-FASCSTD-----QHIHVCKLHSDK 111 (131)
Q Consensus 81 ~v~~~~~~~~~~-~~~~~~d-----~~i~i~d~~~~~ 111 (131)
.. .++.. +++ ++.||.+ ..+..||..+.+
T Consensus 439 ~~-~~~v~-~~~IYviGG~~~~~~~~~ve~Yd~~~~~ 473 (480)
T PHA02790 439 NP-ELIIV-DNKLLLIGGFYRGSYIDTIEVYNNRTYS 473 (480)
T ss_pred cc-EEEEE-CCEEEEECCcCCCcccceEEEEECCCCe
Confidence 22 22222 445 5667654 346677776554
No 460
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=81.60 E-value=16 Score=25.75 Aligned_cols=98 Identities=16% Similarity=0.223 Sum_probs=45.4
Q ss_pred CCCeEEEEcCCCCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCC---eEEEEEcCCCc
Q psy3840 16 YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP---ALDVDWQSNTS 92 (131)
Q Consensus 16 ~d~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~---v~~~~~~~~~~ 92 (131)
......++|.+|..+..+.........+...++|.+++... ..++.+|+. |+.+..+...... =..+...|+|.
T Consensus 126 ~~~~~~~iD~~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nGn 202 (477)
T PF05935_consen 126 SSSYTYLIDNNGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNGN 202 (477)
T ss_dssp BEEEEEEEETTS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS-
T ss_pred CCceEEEECCCccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECCCCC
Confidence 34557777877777665544332222256678888877655 677778864 5554444322211 23455667776
Q ss_pred -EEEEeC-------------CCcEEEEeCCCCeeeEEEe
Q psy3840 93 -FASCST-------------DQHIHVCKLHSDKPVKSFE 117 (131)
Q Consensus 93 -~~~~~~-------------d~~i~i~d~~~~~~~~~~~ 117 (131)
|+.+.. ...|...| ++|+.+..+.
T Consensus 203 ~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd 240 (477)
T PF05935_consen 203 LLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWD 240 (477)
T ss_dssp EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEE
T ss_pred EEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEe
Confidence 444431 12355566 6676666654
No 461
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=79.32 E-value=3.2 Score=16.38 Aligned_cols=23 Identities=9% Similarity=0.200 Sum_probs=12.2
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEE
Q psy3840 41 FALKWNKRGNYILSAGVDKTTII 63 (131)
Q Consensus 41 ~~~~~~~~~~~~~s~~~d~~i~~ 63 (131)
..++.+++|+.+++-.....|.+
T Consensus 5 ~gvav~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 5 HGVAVDSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EEEEEETTSEEEEEECCCTEEEE
T ss_pred cEEEEeCCCCEEEEECCCCEEEE
Confidence 45555555655555544544443
No 462
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=79.04 E-value=14 Score=23.71 Aligned_cols=69 Identities=13% Similarity=0.092 Sum_probs=45.8
Q ss_pred cccEEEEEEcC----C---CCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEE---EEc-CCCcEEEEeCCCcEEEE
Q psy3840 37 KGPIFALKWNK----R---GNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDV---DWQ-SNTSFASCSTDQHIHVC 105 (131)
Q Consensus 37 ~~~i~~~~~~~----~---~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~---~~~-~~~~~~~~~~d~~i~i~ 105 (131)
...|+||+--. + -..++.|..+|.+++.|......+..+.-..-++.-. .|. -|.+++.++.||.|++.
T Consensus 176 ~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdyRI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 176 QTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDYRIVVACRDGKIYTI 255 (257)
T ss_pred CceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccceEEEEEeCCCEEEEE
Confidence 45677776422 1 2368889999999999988777666665444444211 233 45668888999988753
No 463
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=78.96 E-value=16 Score=24.26 Aligned_cols=45 Identities=18% Similarity=0.324 Sum_probs=28.8
Q ss_pred cccCCCCEEEEEeCCCeEEEEcCCCCc---eeec----ccccccEEEEEEcCC
Q psy3840 3 SSRNNGSFLATGSYDGYARIWTSDGSL---KSTL----GQHKGPIFALKWNKR 48 (131)
Q Consensus 3 ~~~~~~~~l~~~~~d~~i~~~~~~~~~---~~~~----~~~~~~i~~~~~~~~ 48 (131)
+|.|+++++++ ...|.|.+++..+.. +..+ .........++++|+
T Consensus 8 a~~pdG~l~v~-e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 8 AFLPDGRLLVA-ERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp EEETTSCEEEE-ETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred EEeCCCcEEEE-eCCceEEEEeCCCcCcceecccccccccccCCcccceeccc
Confidence 46788877665 569999999854432 2221 224457899999994
No 464
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=78.09 E-value=7.6 Score=29.30 Aligned_cols=87 Identities=16% Similarity=0.186 Sum_probs=47.5
Q ss_pred ccccCCCCEEEEEeCCC-----eEEEEcCCCCce---eecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc--e
Q psy3840 2 QSSRNNGSFLATGSYDG-----YARIWTSDGSLK---STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQ--C 71 (131)
Q Consensus 2 ~~~~~~~~~l~~~~~d~-----~i~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~--~ 71 (131)
.+|-|+|..+++-..|| .|.++..+|-.- ....+.......++|+.....++. ...+.+++|...+-. .
T Consensus 252 LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav-~~~n~~~lwttkNyhWYL 330 (1243)
T COG5290 252 LSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAV-AEGNLLKLWTTKNYHWYL 330 (1243)
T ss_pred cccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHH-hhcceEEEEEccceEEEE
Confidence 36889999999977555 366666542111 111233445566666654443333 345678889865521 1
Q ss_pred eeeeecCCCCeEEEEEcCCC
Q psy3840 72 EQQFSFHSAPALDVDWQSNT 91 (131)
Q Consensus 72 ~~~~~~~~~~v~~~~~~~~~ 91 (131)
.... .-..+.-+.|+|+.
T Consensus 331 K~e~--~ip~~s~vkwhpe~ 348 (1243)
T COG5290 331 KVER--QIPGISYVKWHPEE 348 (1243)
T ss_pred EEee--cCCCcceeeecccc
Confidence 1111 12345667888863
No 465
>PRK10115 protease 2; Provisional
Probab=76.08 E-value=30 Score=25.77 Aligned_cols=103 Identities=8% Similarity=0.016 Sum_probs=55.1
Q ss_pred cccCCCCEEEEEeC-CC----eEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCC------CcEEEEECCCc-
Q psy3840 3 SSRNNGSFLATGSY-DG----YARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVD------KTTIIWDAASG- 69 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~----~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d------~~i~~~d~~~~- 69 (131)
.++|++++|+.+.+ +| .|++.|+. +..+....... -..+.|.++++.++....+ ..++.+++.++
T Consensus 133 ~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~--~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~ 210 (686)
T PRK10115 133 AITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV--EPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPA 210 (686)
T ss_pred EECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc--ceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCCh
Confidence 36899998887654 33 36677775 43222221111 1458999988866654332 35677788776
Q ss_pred -ceeeeeecCCCCeE-EEEEcCCCc-EEEE---eCCCcEEEEeC
Q psy3840 70 -QCEQQFSFHSAPAL-DVDWQSNTS-FASC---STDQHIHVCKL 107 (131)
Q Consensus 70 -~~~~~~~~~~~~v~-~~~~~~~~~-~~~~---~~d~~i~i~d~ 107 (131)
+....+........ ....+.+++ ++.. ..++.+.+++.
T Consensus 211 ~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 211 SQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred hHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 33333433223333 222333554 3222 23457888884
No 466
>PRK13684 Ycf48-like protein; Provisional
Probab=75.11 E-value=22 Score=23.73 Aligned_cols=65 Identities=12% Similarity=0.209 Sum_probs=37.0
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEE-EEECCCcceeeeee-cCCCCeEEEEEcCCCcEEEEeCCCcEE
Q psy3840 37 KGPIFALKWNKRGNYILSAGVDKTTI-IWDAASGQCEQQFS-FHSAPALDVDWQSNTSFASCSTDQHIH 103 (131)
Q Consensus 37 ~~~i~~~~~~~~~~~~~s~~~d~~i~-~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~d~~i~ 103 (131)
.+.+..+.+.|++.+++++ ..|.+. .+| ..++...... .....+..+.+.+++.++..+..|.+.
T Consensus 172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~ 238 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVS-SRGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIR 238 (334)
T ss_pred cceEEEEEECCCCeEEEEe-CCceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEE
Confidence 4567888899988766555 444443 222 1122222222 233567888888887755555566554
No 467
>KOG1900|consensus
Probab=75.11 E-value=42 Score=27.00 Aligned_cols=89 Identities=10% Similarity=0.157 Sum_probs=50.6
Q ss_pred eCCCeEEEEcCC-CCceeecccccccEEEEEE-cCCC-------CEEEEEeCCCcEEEEECCC----cce-----eeeee
Q psy3840 15 SYDGYARIWTSD-GSLKSTLGQHKGPIFALKW-NKRG-------NYILSAGVDKTTIIWDAAS----GQC-----EQQFS 76 (131)
Q Consensus 15 ~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~-~~~~-------~~~~s~~~d~~i~~~d~~~----~~~-----~~~~~ 76 (131)
+.|..+.+|+.+ +.....+.+....|..+.. -|.. ++++....--.+.++-+.- +.. ...+.
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 347889999987 4555666665555655542 3332 2333333444455554321 111 02223
Q ss_pred cCCCCeEEEEEcCCCcEEEEeCCCcEE
Q psy3840 77 FHSAPALDVDWQSNTSFASCSTDQHIH 103 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~~~~~~~d~~i~ 103 (131)
.....|.++....+|++..+|.|+.++
T Consensus 176 ~dg~~V~~I~~t~nGRIF~~G~dg~ly 202 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGRIFFAGRDGNLY 202 (1311)
T ss_pred cCCceEEEEEeccCCcEEEeecCCCEE
Confidence 345568888888889977777777543
No 468
>KOG3535|consensus
Probab=74.87 E-value=22 Score=24.67 Aligned_cols=55 Identities=16% Similarity=0.372 Sum_probs=35.7
Q ss_pred EEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcC----CCc-E-EEEeCCCcEEEEeCCCCe
Q psy3840 51 YILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQS----NTS-F-ASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 51 ~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~----~~~-~-~~~~~d~~i~i~d~~~~~ 111 (131)
..+..+-+| |+|+|-.+|... |..+|..|.|-. |.+ + +.++..|.-++|-+++++
T Consensus 94 I~l~Is~~G-IKI~DEKtGav~-----H~hpV~~ISfIArD~tD~RAFGyVcG~eG~hkF~aIKTaQ 154 (557)
T KOG3535|consen 94 ITLQISIDG-IKILDEKTGAVL-----HNHPVSRISFIARDSTDARAFGYVCGEEGKHKFYAIKTAQ 154 (557)
T ss_pred EEEEEeecc-eEEeecccccee-----ccCccceeeeeecccccccceeeeecCCCceeEEEEeccc
Confidence 344445554 888888777653 566777777743 344 3 445566888888887764
No 469
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=73.47 E-value=24 Score=23.52 Aligned_cols=70 Identities=7% Similarity=0.093 Sum_probs=47.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECC-------Ccceeeeeec-----CCCCeEEEEEcCC-------------CcE
Q psy3840 39 PIFALKWNKRGNYILSAGVDKTTIIWDAA-------SGQCEQQFSF-----HSAPALDVDWQSN-------------TSF 93 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~-------~~~~~~~~~~-----~~~~v~~~~~~~~-------------~~~ 93 (131)
.-+.++++|.+...++....+...+||.. ....+..+.. .....+.+.|+.. ..+
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F 103 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF 103 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence 34789999999999998889999999986 1122333332 1124555655421 125
Q ss_pred EEEeCCCcEEEEeCC
Q psy3840 94 ASCSTDQHIHVCKLH 108 (131)
Q Consensus 94 ~~~~~d~~i~i~d~~ 108 (131)
+.+++||+|.-|...
T Consensus 104 if~tEdGTisaW~p~ 118 (336)
T TIGR03118 104 LFVTEDGTLSGWAPA 118 (336)
T ss_pred EEEeCCceEEeecCc
Confidence 778899999999853
No 470
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=72.53 E-value=9.8 Score=21.84 Aligned_cols=45 Identities=13% Similarity=0.157 Sum_probs=22.0
Q ss_pred cccCCCCEEEEEeC-CCeEEEEcCCCC--ceeeccc--ccccEEEEEEcC
Q psy3840 3 SSRNNGSFLATGSY-DGYARIWTSDGS--LKSTLGQ--HKGPIFALKWNK 47 (131)
Q Consensus 3 ~~~~~~~~l~~~~~-d~~i~~~~~~~~--~~~~~~~--~~~~i~~~~~~~ 47 (131)
.|.+|.+.|+.++. |++|+.|.+... .+..+.. ...+...+++-|
T Consensus 17 ~yD~dt~llyl~gKGD~~ir~yEv~~~~p~l~~l~~~~s~~~~~G~~~lP 66 (136)
T PF08954_consen 17 FYDEDTNLLYLAGKGDGNIRYYEVSDESPYLHYLSEYRSPEPQKGFAFLP 66 (136)
T ss_dssp EE-TTT-EEEEEETT-S-EEEEEE-SSTTSEEEEEEE--SS--SEEEE--
T ss_pred eEcCCCCEEEEEeccCcEEEEEEEcCCCCceEEccccccCCCeEeeEecC
Confidence 36677888877776 888999998633 3333322 234555666666
No 471
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=72.44 E-value=21 Score=22.46 Aligned_cols=100 Identities=13% Similarity=0.159 Sum_probs=48.5
Q ss_pred CCEEEEEeCCC--eEEEEcCC-CCceeecccccccEEEEEEcCCCCEE-EEEeCCCcEEEEECCCcceeeeeecCCCCeE
Q psy3840 8 GSFLATGSYDG--YARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYI-LSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 83 (131)
Q Consensus 8 ~~~l~~~~~d~--~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~-~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~ 83 (131)
+.++.+.+.-| .|+.||+. ++.+....--...+..--...-+..+ .-.-.++....+|.++-+++..+.- .+.-+
T Consensus 56 g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y-~GeGW 134 (262)
T COG3823 56 GHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSY-EGEGW 134 (262)
T ss_pred CEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccccc-CCcce
Confidence 45555554433 58888887 44433222111111111111112222 2334577788888888777666553 23445
Q ss_pred EEEEcCCCcEEEEeCCCcEEEEeCCC
Q psy3840 84 DVDWQSNTSFASCSTDQHIHVCKLHS 109 (131)
Q Consensus 84 ~~~~~~~~~~~~~~~d~~i~i~d~~~ 109 (131)
.++....+ ++.++....++.-|.++
T Consensus 135 gLt~d~~~-LimsdGsatL~frdP~t 159 (262)
T COG3823 135 GLTSDDKN-LIMSDGSATLQFRDPKT 159 (262)
T ss_pred eeecCCcc-eEeeCCceEEEecCHHH
Confidence 54442222 55555555566555544
No 472
>KOG2280|consensus
Probab=72.32 E-value=26 Score=26.31 Aligned_cols=48 Identities=19% Similarity=0.371 Sum_probs=37.0
Q ss_pred cEEEEECCCcceeeeeecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCC
Q psy3840 60 TTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLH 108 (131)
Q Consensus 60 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~ 108 (131)
.|++|+. +|..+..+.-.+.++-.+-|+.+..|++-..+|++++|++.
T Consensus 65 ~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ 112 (829)
T KOG2280|consen 65 YIRIFNI-SGQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLL 112 (829)
T ss_pred eEEEEec-cccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecc
Confidence 4666664 46666555555568888999988889999999999999975
No 473
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=70.06 E-value=45 Score=25.22 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=60.7
Q ss_pred ccC-CCCEEEEEeCCCeEEEEcCC------CCceeecccccc----------cEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy3840 4 SRN-NGSFLATGSYDGYARIWTSD------GSLKSTLGQHKG----------PIFALKWNKRGNYILSAGVDKTTIIWDA 66 (131)
Q Consensus 4 ~~~-~~~~l~~~~~d~~i~~~~~~------~~~~~~~~~~~~----------~i~~~~~~~~~~~~~s~~~d~~i~~~d~ 66 (131)
|+| +...||+....|...+|++. ...........+ .-..+.|.++.+.++.++.. .+.++|+
T Consensus 153 FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~-~l~~~d~ 231 (765)
T PF10214_consen 153 FNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS-KLMLIDF 231 (765)
T ss_pred eccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-ceEEEEC
Confidence 554 55789999999999999993 111111111112 22367788877777777655 5778898
Q ss_pred CCcceeeee--ecCCCCeEEEEEcCC--Cc-EEEEeCCCcEEEEeCCC
Q psy3840 67 ASGQCEQQF--SFHSAPALDVDWQSN--TS-FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 67 ~~~~~~~~~--~~~~~~v~~~~~~~~--~~-~~~~~~d~~i~i~d~~~ 109 (131)
.+......+ ......+..+.-+|+ +. ++. ....|...+++.
T Consensus 232 ~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL--Ts~eiiw~~~~~ 277 (765)
T PF10214_consen 232 ESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFIL--TSKEIIWLDVKS 277 (765)
T ss_pred CCCCccchhccCCChhheeeEEecCCccceEEEE--ecCeEEEEEccC
Confidence 876542211 123356777777776 33 322 224565566654
No 474
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=69.70 E-value=14 Score=19.32 Aligned_cols=29 Identities=7% Similarity=0.115 Sum_probs=21.4
Q ss_pred cEEEEEEcCCCCEEEEEeC-CCcEEEEECC
Q psy3840 39 PIFALKWNKRGNYILSAGV-DKTTIIWDAA 67 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~-d~~i~~~d~~ 67 (131)
....+.++|+++.+..++. .+.|+++...
T Consensus 55 ~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 55 FANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 3467888998887776654 6788888754
No 475
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=69.66 E-value=28 Score=22.74 Aligned_cols=53 Identities=13% Similarity=0.249 Sum_probs=32.1
Q ss_pred CcEEEEECCCcceeeeeecCCCCeEEEEEcCCCcE-EEEe------CCCcEEEEeCCCCe
Q psy3840 59 KTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSF-ASCS------TDQHIHVCKLHSDK 111 (131)
Q Consensus 59 ~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~------~d~~i~i~d~~~~~ 111 (131)
..+.+||..+.+=...-..-.+.|.++.|..+.++ +.|. ....+..||+.+..
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~ 75 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT 75 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe
Confidence 34788997664322222224567999999866664 4432 23467888877553
No 476
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=69.37 E-value=25 Score=22.00 Aligned_cols=46 Identities=11% Similarity=0.122 Sum_probs=31.4
Q ss_pred CEEEEEeCCCcEEEEECCC--cceeeeeecCCCCeEEEEEcCCCc-EEEE
Q psy3840 50 NYILSAGVDKTTIIWDAAS--GQCEQQFSFHSAPALDVDWQSNTS-FASC 96 (131)
Q Consensus 50 ~~~~s~~~d~~i~~~d~~~--~~~~~~~~~~~~~v~~~~~~~~~~-~~~~ 96 (131)
..++.+.....|.+|++.. .+.+..+..- +.|..+.++..|. +++-
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTl 77 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTL 77 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEE
Confidence 3444446677799999883 4455566654 7888999998776 5553
No 477
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=68.56 E-value=25 Score=22.48 Aligned_cols=28 Identities=18% Similarity=0.261 Sum_probs=19.1
Q ss_pred EEEEEcCCCCEEEEEeC-C--CcEEEEECCC
Q psy3840 41 FALKWNKRGNYILSAGV-D--KTTIIWDAAS 68 (131)
Q Consensus 41 ~~~~~~~~~~~~~s~~~-d--~~i~~~d~~~ 68 (131)
..=.+.++|+++.+|+. + ..+++++...
T Consensus 70 Sgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~ 100 (243)
T PF07250_consen 70 SGGAFLPDGRLLQTGGDNDGNKAIRIFTPCT 100 (243)
T ss_pred cCcCCCCCCCEEEeCCCCccccceEEEecCC
Confidence 33456789999988875 3 3477777654
No 478
>KOG3522|consensus
Probab=68.24 E-value=32 Score=26.23 Aligned_cols=72 Identities=6% Similarity=0.010 Sum_probs=44.7
Q ss_pred cccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee---cCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCe
Q psy3840 37 KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS---FHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDK 111 (131)
Q Consensus 37 ~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~ 111 (131)
..++...++.. -++-++.+|.+.++...+......+. .+...|+.+.+...+.+++-.....++.++..+..
T Consensus 626 ~lPvrsla~~e---d~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~~~rlfhtetl~ 700 (925)
T KOG3522|consen 626 SLPVRSLAFQE---DFVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGDEERLFHTETLW 700 (925)
T ss_pred Cccccchhhhh---ceeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCCEEEEecccccC
Confidence 34555555433 34667788999999887754443332 35567888888877775544444456666655443
No 479
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=67.98 E-value=31 Score=22.56 Aligned_cols=93 Identities=13% Similarity=0.183 Sum_probs=56.9
Q ss_pred CCeEEEEcCCCCceeecc-cccccEEEEEEcCCCCEEEEEe------CCCcEEEEECCCcceeeeeec-----CCCCeEE
Q psy3840 17 DGYARIWTSDGSLKSTLG-QHKGPIFALKWNKRGNYILSAG------VDKTTIIWDAASGQCEQQFSF-----HSAPALD 84 (131)
Q Consensus 17 d~~i~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~s~~------~d~~i~~~d~~~~~~~~~~~~-----~~~~v~~ 84 (131)
...|++||........+. +-.+.|..|.|..+.++++.|. ....+..||+.+..- ..+.. -.+++..
T Consensus 15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~ipgpv~a 93 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNSIPGPVTA 93 (281)
T ss_pred CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccccCCCcEEE
Confidence 456999998866655443 3567899999987777777764 345677899876532 22222 2367777
Q ss_pred EEEcCC--Cc-EEEEe-CC--CcEEEEeCCCC
Q psy3840 85 VDWQSN--TS-FASCS-TD--QHIHVCKLHSD 110 (131)
Q Consensus 85 ~~~~~~--~~-~~~~~-~d--~~i~i~d~~~~ 110 (131)
+.+..+ .. ++.|. .+ ..+..||=.+.
T Consensus 94 ~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W 125 (281)
T PF12768_consen 94 LTFISNDGSNFWVAGRSANGSTFLMKYDGSSW 125 (281)
T ss_pred EEeeccCCceEEEeceecCCCceEEEEcCCce
Confidence 777432 23 34443 23 34677764433
No 480
>KOG3611|consensus
Probab=67.33 E-value=51 Score=24.94 Aligned_cols=57 Identities=14% Similarity=0.168 Sum_probs=38.2
Q ss_pred CCCEEEEEeCCCeEE-EEcCCC------Cceeecc--cccccEEEEEEcCCCCEEEEEeCCCcEEE
Q psy3840 7 NGSFLATGSYDGYAR-IWTSDG------SLKSTLG--QHKGPIFALKWNKRGNYILSAGVDKTTII 63 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~-~~~~~~------~~~~~~~--~~~~~i~~~~~~~~~~~~~s~~~d~~i~~ 63 (131)
.-..++.|+++|+|. +-.... ..+.+++ .+..+|..|..++....+++++..+.+++
T Consensus 424 ~ydVlflGTd~G~vlKvV~~~~~~~~~~~llEElqvf~~~~pI~~m~Ls~~~~~LyVgs~~gV~qv 489 (737)
T KOG3611|consen 424 NYDVLFLGTDAGTVLKVVSPGKESGKSNVLLEELQVFPDAEPIRSMQLSSKRGSLYVGSRSGVVQV 489 (737)
T ss_pred cEEEEEEecCCCeEEEEEecCCccCccceeEEEEeecCCCCceeEEEecccCCeEEEEccCcEEEe
Confidence 345678888999865 333221 1233332 34578999999998888888888887664
No 481
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=67.12 E-value=22 Score=20.48 Aligned_cols=67 Identities=6% Similarity=0.027 Sum_probs=40.7
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCcc--------eeeeeecCCCCeEEEEE---cCC-Cc-EEEEeCCCcEEEEeCCCC
Q psy3840 44 KWNKRGNYILSAGVDKTTIIWDAASGQ--------CEQQFSFHSAPALDVDW---QSN-TS-FASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 44 ~~~~~~~~~~s~~~d~~i~~~d~~~~~--------~~~~~~~~~~~v~~~~~---~~~-~~-~~~~~~d~~i~i~d~~~~ 110 (131)
+|......++.+...++|.+++..... .+..+. ....|++++- .|+ ++ ++.-+....+..||....
T Consensus 5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N 83 (136)
T PF14781_consen 5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENN 83 (136)
T ss_pred EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccC
Confidence 455656677778888889998876432 223333 3456666654 333 33 444455567889998754
Q ss_pred e
Q psy3840 111 K 111 (131)
Q Consensus 111 ~ 111 (131)
.
T Consensus 84 ~ 84 (136)
T PF14781_consen 84 S 84 (136)
T ss_pred c
Confidence 3
No 482
>PHA02790 Kelch-like protein; Provisional
Probab=67.04 E-value=42 Score=23.70 Aligned_cols=63 Identities=11% Similarity=0.053 Sum_probs=31.2
Q ss_pred CCCEEEEEeCCC--eEEEEcCCCCceeecccccccEEEE-EEcCCCCEEEEEeCCC---cEEEEECCCc
Q psy3840 7 NGSFLATGSYDG--YARIWTSDGSLKSTLGQHKGPIFAL-KWNKRGNYILSAGVDK---TTIIWDAASG 69 (131)
Q Consensus 7 ~~~~l~~~~~d~--~i~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~s~~~d~---~i~~~d~~~~ 69 (131)
++...+.|+.++ .+..||..............+.... ...-++...+.|+.++ .+..||.++.
T Consensus 318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~ 386 (480)
T PHA02790 318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHD 386 (480)
T ss_pred CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCC
Confidence 455666676533 4667775433222222222111111 1122677777777543 4667887653
No 483
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=66.03 E-value=44 Score=23.60 Aligned_cols=56 Identities=9% Similarity=-0.030 Sum_probs=34.8
Q ss_pred CCCEEEEEeCCCeEEEEcCCCC---c---eeecccccccEEEEEEcCCC-CEEEEEeCCCcEE
Q psy3840 7 NGSFLATGSYDGYARIWTSDGS---L---KSTLGQHKGPIFALKWNKRG-NYILSAGVDKTTI 62 (131)
Q Consensus 7 ~~~~l~~~~~d~~i~~~~~~~~---~---~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~ 62 (131)
++++|+.+-..+.|....+.+. . ...+....+.++.++..|+| .+.+..+..|.+.
T Consensus 368 ~g~llv~~L~~~~l~r~~l~~~~~~v~~~~~~~~~~~~RiRdv~~~pDg~~iy~~td~~g~~~ 430 (454)
T TIGR03606 368 ENSLLIPSLKRGVIYRIKLDPDYSTVYGDAVPMFKTNNRYRDVIASPDGNVLYVATDNFGNVQ 430 (454)
T ss_pred CCCEEEEEcCCCeEEEEEecCCcceecceeEEeecCCCeeEEEEECCCCCEEEEEEcCCCccc
Confidence 4677777777777766665422 1 12222225689999999997 6666666666544
No 484
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=65.75 E-value=34 Score=25.66 Aligned_cols=61 Identities=10% Similarity=0.151 Sum_probs=39.7
Q ss_pred CCCCEEEEEeCCCeEEEEcCC---CCcee-ecccccccEEEEEEcCCC---C---EEEEEeCCCcEEEEEC
Q psy3840 6 NNGSFLATGSYDGYARIWTSD---GSLKS-TLGQHKGPIFALKWNKRG---N---YILSAGVDKTTIIWDA 66 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~---~~~~~-~~~~~~~~i~~~~~~~~~---~---~~~s~~~d~~i~~~d~ 66 (131)
...++||++++...|.+|-.. .+... .-..+...|-++.|-++. . .+++++-.|.+.+|++
T Consensus 175 ~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 175 KKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred CcceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 456788888888888887543 11111 112355578888886632 2 6777888999998887
No 485
>KOG3522|consensus
Probab=65.63 E-value=16 Score=27.73 Aligned_cols=102 Identities=17% Similarity=0.191 Sum_probs=54.0
Q ss_pred CCEEEEEeCCCeEEEEcCC-CCce----eecccccccEEEEEEcCCCCEEEEEeCCCcEEE--------EECCCcceeee
Q psy3840 8 GSFLATGSYDGYARIWTSD-GSLK----STLGQHKGPIFALKWNKRGNYILSAGVDKTTII--------WDAASGQCEQQ 74 (131)
Q Consensus 8 ~~~l~~~~~d~~i~~~~~~-~~~~----~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~--------~d~~~~~~~~~ 74 (131)
...+..|+.++.+.++.-. +... .........+.++.+++. .+..|.-||++-. ||.. ....
T Consensus 547 ~PTic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss~--Slgagl~dgt~a~y~rap~gSwd~e---p~~~ 621 (925)
T KOG3522|consen 547 HPTICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSSG--SLGAGLIDGTLAVYGRAPSGSWDGE---PNIS 621 (925)
T ss_pred CCcccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhcccc--ccccCccCCccccccCCCCCCCCCC---Cccc
Confidence 3567778888999988754 2111 111222334555555432 1222333444333 4443 2222
Q ss_pred eecCCCCeEEEEEcCCCcEEEEeCCCcEEEEeCCCCeeeEEE
Q psy3840 75 FSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 75 ~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~ 116 (131)
+.....++...++..+ .+.++.+|.+.++...+.......
T Consensus 622 ~~~g~lPvrsla~~ed--~~was~gG~V~vi~~tt~~~~~~l 661 (925)
T KOG3522|consen 622 IPTGSLPVRSLAFQED--FVWASEGGCVHVIPSTTFIRSWDL 661 (925)
T ss_pred cccCCccccchhhhhc--eeeeecCCceEEEechhccccchh
Confidence 3334456777766554 566778889999987765444433
No 486
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=65.40 E-value=45 Score=23.50 Aligned_cols=94 Identities=9% Similarity=0.106 Sum_probs=43.6
Q ss_pred CCeEEEEcCC-CCceeeccccc--ccEEEEEEcC--CCCEEEEE-eCCCcEEEEEC-CCcc----eeeeeecC-------
Q psy3840 17 DGYARIWTSD-GSLKSTLGQHK--GPIFALKWNK--RGNYILSA-GVDKTTIIWDA-ASGQ----CEQQFSFH------- 78 (131)
Q Consensus 17 d~~i~~~~~~-~~~~~~~~~~~--~~i~~~~~~~--~~~~~~s~-~~d~~i~~~d~-~~~~----~~~~~~~~------- 78 (131)
..++++||.. .+.++++.--. .-...++|.. +..+-+++ .-.++|..|-- ..++ .+..+...
T Consensus 221 G~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~l 300 (461)
T PF05694_consen 221 GHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWIL 300 (461)
T ss_dssp --EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS--
T ss_pred cCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccc
Confidence 4679999987 55555554322 2345666654 44443333 33555554433 3321 12222110
Q ss_pred ----------CCCeEEEEEcCCCc-E-EEEeCCCcEEEEeCCCC
Q psy3840 79 ----------SAPALDVDWQSNTS-F-ASCSTDQHIHVCKLHSD 110 (131)
Q Consensus 79 ----------~~~v~~~~~~~~~~-~-~~~~~d~~i~i~d~~~~ 110 (131)
..-++.|..+.|.+ | +++--+|.++.||+...
T Consensus 301 p~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP 344 (461)
T PF05694_consen 301 PEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDP 344 (461)
T ss_dssp -GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SST
T ss_pred cccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCC
Confidence 23478888999877 3 56667899999999754
No 487
>KOG2103|consensus
Probab=64.64 E-value=62 Score=24.80 Aligned_cols=78 Identities=9% Similarity=0.054 Sum_probs=49.4
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecC-CCCeEEEEEcCCCcEEEEeCC-CcEEEEeCCCCeeeEE
Q psy3840 38 GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH-SAPALDVDWQSNTSFASCSTD-QHIHVCKLHSDKPVKS 115 (131)
Q Consensus 38 ~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~d-~~i~i~d~~~~~~~~~ 115 (131)
.++..+.+.+..+++++....|.+.-.++++|+.+....-. ......+.+ .-+-+.| ..++.||.+.|.....
T Consensus 36 ~k~~~~~~~t~~~rlivsT~~~vlAsL~~~tGei~WRqvl~~~~~~~~~~~-----~~~iS~dg~~lr~wn~~~g~l~~~ 110 (910)
T KOG2103|consen 36 KKVNFLVYDTKSKRLIVSTEKGVLASLNLRTGEIIWRQVLEPKTSGLGVPL-----TNTISVDGRYLRSWNTNNGILDWE 110 (910)
T ss_pred eeEEEEeecCCCceEEEEeccchhheecccCCcEEEEEeccCCCcccCcce-----eEEEccCCcEEEeecCCCceeeee
Confidence 35677888888888999999999999999999887553311 111111111 1112333 4688999888866555
Q ss_pred Eeccc
Q psy3840 116 FEGHT 120 (131)
Q Consensus 116 ~~~~~ 120 (131)
+..+.
T Consensus 111 i~l~~ 115 (910)
T KOG2103|consen 111 IELAD 115 (910)
T ss_pred ccccc
Confidence 54443
No 488
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=63.11 E-value=53 Score=25.45 Aligned_cols=54 Identities=13% Similarity=0.071 Sum_probs=33.5
Q ss_pred CCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEE-Ee-CC----CcEEEEeCCCC
Q psy3840 57 VDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FAS-CS-TD----QHIHVCKLHSD 110 (131)
Q Consensus 57 ~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~-~~-~d----~~i~i~d~~~~ 110 (131)
..+.+.+-|.........-..+..++.+-.|+|||+ ++- .+ .. ..|++-|+++.
T Consensus 327 ~~~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~ 387 (912)
T TIGR02171 327 VTGNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNAS 387 (912)
T ss_pred CCCeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhcc
Confidence 334677777665444333133567888999999988 543 22 22 24888888753
No 489
>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]
Probab=63.09 E-value=51 Score=25.72 Aligned_cols=91 Identities=14% Similarity=0.212 Sum_probs=44.4
Q ss_pred eCCCeEEEEcCC-CCceeecccccccEEEEE-EcCCCCEEEE-------EeCCCcEEEEEC----CCcceee-----eee
Q psy3840 15 SYDGYARIWTSD-GSLKSTLGQHKGPIFALK-WNKRGNYILS-------AGVDKTTIIWDA----ASGQCEQ-----QFS 76 (131)
Q Consensus 15 ~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~-~~~~~~~~~s-------~~~d~~i~~~d~----~~~~~~~-----~~~ 76 (131)
+.|+.+.+||.. +...+........|..++ +.|..+.+++ ......+.++-+ ++++... ...
T Consensus 99 T~dnkLiLWnynn~neyq~idd~shtIlkVkLvrPkantFvs~i~hlL~vAT~~e~~ilgvs~d~~T~Els~fnTgl~vs 178 (1263)
T COG5308 99 TNDNKLILWNYNNSNEYQEIDDFSHTILKVKLVRPKANTFVSRISHLLFVATEKEVMILGVSKDTKTGELSLFNTGLVVS 178 (1263)
T ss_pred EcCCEEEEEecCCCcchhhhhhhhhheeEEEEeccCCcccHHhhhhhhhhhhhheeeEEEEEeccccceeEEEecceEEe
Confidence 357889999987 444444433333444443 3444443222 122233444332 2333210 111
Q ss_pred cCCCCeEEEEEcCCCcE-EEEeCCCcEEEEeC
Q psy3840 77 FHSAPALDVDWQSNTSF-ASCSTDQHIHVCKL 107 (131)
Q Consensus 77 ~~~~~v~~~~~~~~~~~-~~~~~d~~i~i~d~ 107 (131)
.....|.++..+.+|++ .+|..| +.+|.+
T Consensus 179 vqGinV~civs~e~GrIFf~g~~d--~nvyEl 208 (1263)
T COG5308 179 VQGINVRCIVSEEDGRIFFGGEND--PNVYEL 208 (1263)
T ss_pred ccCceeEEEEeccCCcEEEecCCC--CCeEEE
Confidence 22345777777778885 455444 666654
No 490
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=62.65 E-value=66 Score=24.41 Aligned_cols=66 Identities=11% Similarity=0.055 Sum_probs=43.2
Q ss_pred ccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeee----e-----------cCC----CCeEEEEEcCCCc-EEEEe
Q psy3840 38 GPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQF----S-----------FHS----APALDVDWQSNTS-FASCS 97 (131)
Q Consensus 38 ~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~----~-----------~~~----~~v~~~~~~~~~~-~~~~~ 97 (131)
..|.++....-+..++..-.||+|.++|..+.+.+... . +.. .++..++|+|.+. ++.-.
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~ 339 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQID 339 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEe
Confidence 45667766666778888999999999998775443222 0 001 1234577899866 66666
Q ss_pred CCCcEE
Q psy3840 98 TDQHIH 103 (131)
Q Consensus 98 ~d~~i~ 103 (131)
.++.+.
T Consensus 340 ~~~~~~ 345 (753)
T PF11635_consen 340 EDGKTK 345 (753)
T ss_pred cCCCce
Confidence 777644
No 491
>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]
Probab=62.04 E-value=54 Score=23.20 Aligned_cols=91 Identities=10% Similarity=0.124 Sum_probs=53.7
Q ss_pred eEEEEcCCCCceeeccc--ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcC--CCcE-
Q psy3840 19 YARIWTSDGSLKSTLGQ--HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQS--NTSF- 93 (131)
Q Consensus 19 ~i~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~- 93 (131)
.+.+.|-+...+..+.+ ....|..++|..+--++++--.-..+.+.|+.+.+..+.+..-.-+-.+--.+| ++++
T Consensus 407 ~vYilDe~lnvvGkltGl~~gERIYAvRf~gdv~yiVTfrqtDPlfviDlsNPenPkvlGeLKIPGfS~YLHpigen~~l 486 (603)
T COG4880 407 AVYILDENLNVVGKLTGLAPGERIYAVRFVGDVLYIVTFRQTDPLFVIDLSNPENPKVLGELKIPGFSEYLHPIGENRLL 486 (603)
T ss_pred eeEEEcCCCcEEEEEeccCCCceEEEEEEeCceEEEEEEeccCceEEEEcCCCCCCceeEEEecCCchhhccccCCCcEE
Confidence 35555655555555554 346889999987777777777766788889887655444332222222222344 3443
Q ss_pred EEEeCCC--cEEEEeCCC
Q psy3840 94 ASCSTDQ--HIHVCKLHS 109 (131)
Q Consensus 94 ~~~~~d~--~i~i~d~~~ 109 (131)
-.|..+| +|.+||+..
T Consensus 487 GvG~~~g~vKiSLFdiSd 504 (603)
T COG4880 487 GVGAYQGGVKISLFDISD 504 (603)
T ss_pred EeecccCCceEEEEeccC
Confidence 3444555 467788754
No 492
>KOG2727|consensus
Probab=60.60 E-value=24 Score=27.31 Aligned_cols=76 Identities=9% Similarity=0.045 Sum_probs=0.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEE---------cCCCc-----EEEEeCCCcEEEEeC
Q psy3840 42 ALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDW---------QSNTS-----FASCSTDQHIHVCKL 107 (131)
Q Consensus 42 ~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~---------~~~~~-----~~~~~~d~~i~i~d~ 107 (131)
.+..+|++++.+..+.=+.+.+.|......++.+++.++.-....- .-+.+ .+-+-..|.+-||.+
T Consensus 326 ~lslSP~gtlAAVTD~lgRVlLlDta~~ivvr~wKGYRDAsc~fv~vkek~~~s~~~~sRvAlFLvIyAPRrgiLEVW~~ 405 (1244)
T KOG2727|consen 326 KLSLSPSGTLAAVTDSLGRVLLLDTAALIVVRLWKGYRDASCVFVEVKEKKGKSEPVKSRVALFLVIYAPRRGILEVWQM 405 (1244)
T ss_pred eeeeCCCccEEEEecccCcEEEEehhhhhHHHHhcccccceeEEEEcccccCCCccCcCceeEEEEEecccccHHHHHHh
Q ss_pred CCCeeeEEEe
Q psy3840 108 HSDKPVKSFE 117 (131)
Q Consensus 108 ~~~~~~~~~~ 117 (131)
.+|..+..+.
T Consensus 406 q~gpRV~Afn 415 (1244)
T KOG2727|consen 406 QTGPRVLAFN 415 (1244)
T ss_pred ccCCeEEEEe
No 493
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=60.12 E-value=6.1 Score=15.10 Aligned_cols=9 Identities=11% Similarity=0.305 Sum_probs=5.9
Q ss_pred ccccCCCCE
Q psy3840 2 QSSRNNGSF 10 (131)
Q Consensus 2 ~~~~~~~~~ 10 (131)
..|||+|++
T Consensus 6 t~FSp~Grl 14 (23)
T PF10584_consen 6 TTFSPDGRL 14 (23)
T ss_dssp TSBBTTSSB
T ss_pred eeECCCCeE
Confidence 457777764
No 494
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=58.52 E-value=48 Score=21.54 Aligned_cols=98 Identities=11% Similarity=0.115 Sum_probs=53.6
Q ss_pred eCCCeEEEEcCC-CCceeecccccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeeecCC-----CCeEEEEEc
Q psy3840 15 SYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHS-----APALDVDWQ 88 (131)
Q Consensus 15 ~~d~~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-----~~v~~~~~~ 88 (131)
-.++...+||.. -+.+.++. ..+.=+.++ .++..++..+....++.+|..+.+....+.... ..++.+-|.
T Consensus 107 Wk~~~~f~yd~~tl~~~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i 183 (264)
T PF05096_consen 107 WKEGTGFVYDPNTLKKIGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI 183 (264)
T ss_dssp SSSSEEEEEETTTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE
T ss_pred ecCCeEEEEccccceEEEEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE
Confidence 346777788875 33443332 223335555 456677777778899999998877666554321 234555554
Q ss_pred CCCc-EEEEeCCCcEEEEeCCCCeeeEEE
Q psy3840 89 SNTS-FASCSTDQHIHVCKLHSDKPVKSF 116 (131)
Q Consensus 89 ~~~~-~~~~~~d~~i~i~d~~~~~~~~~~ 116 (131)
+|. ++-.=....|...|..+|+.+..+
T Consensus 184 -~G~IyANVW~td~I~~Idp~tG~V~~~i 211 (264)
T PF05096_consen 184 -NGKIYANVWQTDRIVRIDPETGKVVGWI 211 (264)
T ss_dssp -TTEEEEEETTSSEEEEEETTT-BEEEEE
T ss_pred -cCEEEEEeCCCCeEEEEeCCCCeEEEEE
Confidence 444 333334556777777777766655
No 495
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=58.45 E-value=54 Score=22.07 Aligned_cols=78 Identities=14% Similarity=0.011 Sum_probs=46.2
Q ss_pred CCCEEEEEeCCCcEEEEECCCcceeeeeecCCCCeEEEEEcCCCc-EEEE-e-------------------CCCcEEEEe
Q psy3840 48 RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-FASC-S-------------------TDQHIHVCK 106 (131)
Q Consensus 48 ~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~-~-------------------~d~~i~i~d 106 (131)
++++.++-+..|.+..+|..+|+...... -.+....+.|. |. ++.+ + ...-+.+.|
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~-vpG~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~vid 288 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAF-LPGFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAVID 288 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEE-CCCCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEEEE
Confidence 67788888889999999987775432222 12233445554 22 1111 1 124578899
Q ss_pred CCCCeeeEEEecccceEEEEeee
Q psy3840 107 LHSDKPVKSFEGHTRVYYLAMDL 129 (131)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~ 129 (131)
+++|..+..++... .+.-++|+
T Consensus 289 l~tG~vv~~l~feg-~v~EifdV 310 (335)
T TIGR03032 289 LNSGDVVHWLRFEG-VIEEIYDV 310 (335)
T ss_pred CCCCCEEEEEEeCC-ceeEEEEE
Confidence 99999888776433 34444443
No 496
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=57.68 E-value=21 Score=19.76 Aligned_cols=20 Identities=5% Similarity=0.154 Sum_probs=15.5
Q ss_pred CCcEEEEeCCCCeeeEEEec
Q psy3840 99 DQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 99 d~~i~i~d~~~~~~~~~~~~ 118 (131)
...|.|||+.+|+.+.++..
T Consensus 40 ~E~V~I~Nv~NG~Rf~TYvI 59 (111)
T cd06919 40 YEKVLVVNVNNGARFETYVI 59 (111)
T ss_pred CCEEEEEECCCCcEEEEEEE
Confidence 35788999999988887753
No 497
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=55.61 E-value=69 Score=22.43 Aligned_cols=104 Identities=18% Similarity=0.218 Sum_probs=58.7
Q ss_pred CCCCEEEEEeCCCeEEEEcCCC---Cc--eeecccccccEEEEEEc---C-CCCEEEEEeCCCcEEEEECCC--cc----
Q psy3840 6 NNGSFLATGSYDGYARIWTSDG---SL--KSTLGQHKGPIFALKWN---K-RGNYILSAGVDKTTIIWDAAS--GQ---- 70 (131)
Q Consensus 6 ~~~~~l~~~~~d~~i~~~~~~~---~~--~~~~~~~~~~i~~~~~~---~-~~~~~~s~~~d~~i~~~d~~~--~~---- 70 (131)
.+...|++|+..|.+++|+... +. +..-..-..+|..+..- + .....+..-.-..+.+|.+.. +.
T Consensus 35 ~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g 114 (418)
T PF14727_consen 35 SGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHG 114 (418)
T ss_pred CCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccC
Confidence 3567999999999999999762 11 11112244678777643 3 233333345666777777632 11
Q ss_pred ---eeeeeecCCC--CeEEEEEcC----CCc--EEEEeCCCcEEEEeCCC
Q psy3840 71 ---CEQQFSFHSA--PALDVDWQS----NTS--FASCSTDQHIHVCKLHS 109 (131)
Q Consensus 71 ---~~~~~~~~~~--~v~~~~~~~----~~~--~~~~~~d~~i~i~d~~~ 109 (131)
.+..+..|.- ....+.+-| .++ +..-+-||.+.+|+-+.
T Consensus 115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~ 164 (418)
T PF14727_consen 115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQES 164 (418)
T ss_pred cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCc
Confidence 1222223322 223333322 223 66678899999998654
No 498
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=54.89 E-value=23 Score=16.79 Aligned_cols=19 Identities=16% Similarity=0.307 Sum_probs=15.2
Q ss_pred cEEEEEEcCCCCEEEEEeC
Q psy3840 39 PIFALKWNKRGNYILSAGV 57 (131)
Q Consensus 39 ~i~~~~~~~~~~~~~s~~~ 57 (131)
....++..|+|+.++.|..
T Consensus 2 ~~~~~~~q~DGkIlv~G~~ 20 (55)
T TIGR02608 2 RAYAVAVQSDGKILVAGYV 20 (55)
T ss_pred ceEEEEECCCCcEEEEEEe
Confidence 3577888999999998854
No 499
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=54.17 E-value=25 Score=19.97 Aligned_cols=20 Identities=0% Similarity=0.283 Sum_probs=15.8
Q ss_pred CCcEEEEeCCCCeeeEEEec
Q psy3840 99 DQHIHVCKLHSDKPVKSFEG 118 (131)
Q Consensus 99 d~~i~i~d~~~~~~~~~~~~ 118 (131)
...|.|||+.+|+.+.++..
T Consensus 41 ~E~V~V~Nv~NG~Rf~TYvI 60 (126)
T PRK05449 41 NEKVQIVNVNNGARFETYVI 60 (126)
T ss_pred CCEEEEEECCCCcEEEEEEE
Confidence 35789999999988887753
No 500
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=53.56 E-value=73 Score=22.10 Aligned_cols=99 Identities=9% Similarity=-0.021 Sum_probs=53.0
Q ss_pred ccCCCCEEEEEeCCCeEEEEcCCCC-----ceeeccc--ccccEEEEEEcCCCCEEEEEeCCCcEEEEECCCcceeeeee
Q psy3840 4 SRNNGSFLATGSYDGYARIWTSDGS-----LKSTLGQ--HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS 76 (131)
Q Consensus 4 ~~~~~~~l~~~~~d~~i~~~~~~~~-----~~~~~~~--~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 76 (131)
+.+++..++++ ..|.+..=+-.+. ....... -...+..+.+.+++..+++| ..|.+... ...++.-....
T Consensus 288 ~~~dg~l~l~g-~~G~l~~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s-~D~G~tW~~~~ 364 (398)
T PLN00033 288 WRADGGLWLLT-RGGGLYVSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRS-TDGGKSWKRDK 364 (398)
T ss_pred EcCCCCEEEEe-CCceEEEecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEe-CCCCcceeEcc
Confidence 34566666655 4555443222232 1122111 11247888888887776666 55555543 34444433322
Q ss_pred ---cCCCCeEEEEEcCCCcEEEEeCCCcEEEE
Q psy3840 77 ---FHSAPALDVDWQSNTSFASCSTDQHIHVC 105 (131)
Q Consensus 77 ---~~~~~v~~~~~~~~~~~~~~~~d~~i~i~ 105 (131)
.-....+.+.|.++++....+.+|.|.-|
T Consensus 365 ~~~~~~~~ly~v~f~~~~~g~~~G~~G~il~~ 396 (398)
T PLN00033 365 GADNIAANLYSVKFFDDKKGFVLGNDGVLLRY 396 (398)
T ss_pred ccCCCCcceeEEEEcCCCceEEEeCCcEEEEe
Confidence 12346778998887775556667766443
Done!