RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3840
(131 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 65.9 bits (159), Expect = 2e-14
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 3 SSRNNGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTT 61
S G FL +GS D ++W S G TL H + + ++ G +ILS DKT
Sbjct: 212 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 271
Query: 62 IIWDAASGQCEQQFSFHSAPALDVDW-QSNTSFASCSTDQHIHV 104
+WD + +C + + H +D+ ++ + S DQ + V
Sbjct: 272 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 315
Score = 55.5 bits (132), Expect = 1e-10
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 23/151 (15%)
Query: 1 MQSSRNNGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWN------------- 46
M +G+ +A+ S D R+W + K+ L +H+ + + W
Sbjct: 148 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATG 207
Query: 47 -------KRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSF-ASCST 98
K G ++LS DKT +WD ++G C H V + S F SC+
Sbjct: 208 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD 267
Query: 99 DQHIHVCKLHSDKPVKSFEGHT-RVYYLAMD 128
D+ + V + + +K+ H V L
Sbjct: 268 DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 298
Score = 54.7 bits (130), Expect = 2e-10
Identities = 15/88 (17%), Positives = 33/88 (37%)
Query: 21 RIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80
+ W K L H+ P+ + ++ + ++SA D T +WD +G E+ H+
Sbjct: 1 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 60
Query: 81 PALDVDWQSNTSFASCSTDQHIHVCKLH 108
D+ + + + +
Sbjct: 61 SVQDISFDHSGKLLASCSADMTIKLWDF 88
Score = 52.4 bits (124), Expect = 1e-09
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 7 NGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65
G F+ + + D R+W + TL H+ + +L ++K Y+++ VD+T +W+
Sbjct: 258 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 45.9 bits (107), Expect = 2e-07
Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 2/120 (1%)
Query: 7 NGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65
S + + S D ++W G + TL H + + ++ G + S D T +WD
Sbjct: 28 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 87
Query: 66 AASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYY 124
+C + H V N S S D+ I + ++ + VK+F GH
Sbjct: 88 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 147
Score = 45.9 bits (107), Expect = 2e-07
Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 22/142 (15%)
Query: 1 MQSSRNNGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDK 59
S NG + + S D ++W G T H+ + ++ N+ G I S D+
Sbjct: 106 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 165
Query: 60 TTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS---------------------FASCST 98
T +W A+ +C+ + H + W +S S S
Sbjct: 166 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR 225
Query: 99 DQHIHVCKLHSDKPVKSFEGHT 120
D+ I + + + + + GH
Sbjct: 226 DKTIKMWDVSTGMCLMTLVGHD 247
Score = 30.1 bits (66), Expect = 0.059
Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 73 QQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHT 120
S H +P V + S S S D I V + ++ +GHT
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 58.2 bits (139), Expect = 1e-11
Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 4/102 (3%)
Query: 7 NGSFLATGSYDGYARI---WTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTII 63
NG+ ATGS D R+ + + I ++ ++K G +L+ D +
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296
Query: 64 WDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHV 104
WDA + H + + A+ S D + +
Sbjct: 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Score = 55.1 bits (131), Expect = 1e-10
Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 5/132 (3%)
Query: 1 MQSSRNNGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDK 59
S + +G+ D A++W +G + T H+ I A+ + GN + D
Sbjct: 189 SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248
Query: 60 TTII--WDAASGQCEQQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSF 116
T + A V + + + D + +V
Sbjct: 249 TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL 308
Query: 117 EGHT-RVYYLAM 127
GH RV L +
Sbjct: 309 AGHDNRVSCLGV 320
Score = 54.4 bits (129), Expect = 2e-10
Identities = 12/61 (19%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Query: 6 NNGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIW 64
+G L G D +W L H + L G + + D IW
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Query: 65 D 65
+
Sbjct: 340 N 340
Score = 44.7 bits (104), Expect = 6e-07
Identities = 16/92 (17%), Positives = 32/92 (34%)
Query: 29 LKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQ 88
+ TL H I+A+ W ++SA D IIWD+ + S+ + +
Sbjct: 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 89 SNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120
+ ++ +C +I +
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRE 138
Score = 39.7 bits (91), Expect = 4e-05
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 35 QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTS-F 93
H G + +L +S D + +WD G C Q F+ H + + + N + F
Sbjct: 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241
Query: 94 ASCSTDQHIHVCKLH 108
A+ S D + L
Sbjct: 242 ATGSDDATCRLFDLR 256
Score = 28.9 bits (63), Expect = 0.19
Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Query: 7 NGSFLATGSYDG-YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65
+ L + S DG + + + + + GNY+ G+D I++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 66 AASGQCEQQFSFH 78
+ + + S
Sbjct: 126 LKTREGNVRVSRE 138
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 54.9 bits (130), Expect = 2e-10
Identities = 12/121 (9%), Positives = 33/121 (27%), Gaps = 3/121 (2%)
Query: 7 NGSFLATGSYDGYARIW---TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTII 63
+ + +A + I+ + L +H G + + W N I++ G D+ +
Sbjct: 18 DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYV 77
Query: 64 WDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVY 123
W + + + + V + + + +
Sbjct: 78 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIK 137
Query: 124 Y 124
Sbjct: 138 K 138
Score = 45.6 bits (106), Expect = 3e-07
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 36 HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF--HSAPALDVDWQSNTS- 92
PI WNK I + I++ + + Q H+ VDW +++
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 93 FASCSTDQHIHVCKLH 108
+C TD++ +V L
Sbjct: 66 IVTCGTDRNAYVWTLK 81
Score = 31.0 bits (68), Expect = 0.039
Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 4/72 (5%)
Query: 3 SSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNY----ILSAGVD 58
S R + + D A S + HK + + G + G+D
Sbjct: 291 SQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMD 350
Query: 59 KTTIIWDAASGQ 70
IWD S +
Sbjct: 351 GGMSIWDVRSLE 362
Score = 26.7 bits (57), Expect = 0.93
Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 2 QSSRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHK 37
+ S T DG IW SL+S L K
Sbjct: 335 SGGKAKCSQFCTTGMDGGMSIWDVR-SLESALKDLK 369
Score = 26.4 bits (56), Expect = 1.3
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Query: 76 SFHSAPALDVDW-QSNTSFASCSTDQHIHVCKLHSDKP--VKSFEGHTR 121
SF P W + T A C + +H+ + +K V + H
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG 52
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 53.3 bits (126), Expect = 6e-10
Identities = 24/122 (19%), Positives = 42/122 (34%), Gaps = 20/122 (16%)
Query: 6 NNGSFLATGSYDGYARIWTSDG-------------SLKSTLGQHKGPIFALKWNKRGNYI 52
+G + +GS D ++W + + T HK + ++ + YI
Sbjct: 264 RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI 323
Query: 53 LSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSF-------ASCSTDQHIHVC 105
LS D+ + WD SG H + V + +S A+ S D +
Sbjct: 324 LSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383
Query: 106 KL 107
K
Sbjct: 384 KY 385
Score = 53.3 bits (126), Expect = 7e-10
Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 21/141 (14%)
Query: 1 MQSSRNNGSFLATGSYDGYARIWTSDG--------SLKSTLGQHKGPIFALKWNKRGNYI 52
+ S +G ++A GS D R+W S+ S + HK ++++ + + G +
Sbjct: 210 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV 269
Query: 53 LSAGVDKTTIIWDAASGQ------------CEQQFSFHSAPALDVDWQSNTSF-ASCSTD 99
+S +D++ +W+ + CE + H L V N + S S D
Sbjct: 270 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 329
Query: 100 QHIHVCKLHSDKPVKSFEGHT 120
+ + S P+ +GH
Sbjct: 330 RGVLFWDKKSGNPLLMLQGHR 350
Score = 42.1 bits (97), Expect = 6e-06
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 10/107 (9%)
Query: 10 FLATGSYDGYARIWTS------DGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTII 63
+ Y ++ D L +L H + +K++ G Y+ + G +KTT +
Sbjct: 30 DALKKQTNDYYILYNPALPREIDVELHKSLD-HTSVVCCVKFSNDGEYLAT-GCNKTTQV 87
Query: 64 WDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSD 110
+ + G + S SA D + + + +S S+D +I D
Sbjct: 88 YRVSDGSLVARLSDDSAANKDPENLN--TSSSPSSDLYIRSVCFSPD 132
Score = 31.3 bits (69), Expect = 0.025
Identities = 10/89 (11%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Query: 39 PIFALKWNKRGN-YILSAGVDKTTIIWDAASGQC----EQQFSFHSAPALDVDWQSNTSF 93
P F L + + L + I+++ A + + H++ V + ++ +
Sbjct: 17 PPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEY 76
Query: 94 ASCSTDQHIHVCKLHSDKPVKSFEGHTRV 122
+ ++ V ++ V +
Sbjct: 77 LATGCNKTTQVYRVSDGSLVARLSDDSAA 105
Score = 27.8 bits (60), Expect = 0.44
Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 18/118 (15%)
Query: 6 NNGSFLATGSYDGYARIWTSDGSLKSTL------------------GQHKGPIFALKWNK 47
N+G +LATG SDGSL + L I ++ ++
Sbjct: 72 NDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 131
Query: 48 RGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVC 105
G ++ + D+ IWD + + H +D+ + +
Sbjct: 132 DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRI 189
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 50.0 bits (117), Expect = 9e-09
Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 1/86 (1%)
Query: 27 GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFS-FHSAPALDV 85
GS+ H I AL + G + SA + WD ++G + F H+ +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 86 DWQSNTSFASCSTDQHIHVCKLHSDK 111
S + S D H+ V
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAGGSG 87
Score = 33.4 bits (74), Expect = 0.004
Identities = 14/115 (12%), Positives = 36/115 (31%), Gaps = 2/115 (1%)
Query: 7 NGSFLATGSYDGYARIW--TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIW 64
+G L + +G+ W ++ S + H I +K +G+ + D ++
Sbjct: 23 DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVP 82
Query: 65 DAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGH 119
SG + + + + + + H+ K + +
Sbjct: 83 AGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISY 137
Score = 33.0 bits (73), Expect = 0.006
Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 12 ATGSYDGYARIW----TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65
ATGS D +W SD + + ++ W I+SAG D W+
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN-ETTIVSAGQDSNIKFWN 296
Score = 30.3 bits (66), Expect = 0.056
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Query: 45 WNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF---HSAPALDVDWQSNTSFASCSTDQH 101
W+ + + +D + I+W+ + V W + T+ S D +
Sbjct: 232 WSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSN 291
Query: 102 IHV 104
I
Sbjct: 292 IKF 294
Score = 23.8 bits (49), Expect = 9.4
Identities = 3/17 (17%), Positives = 7/17 (41%)
Query: 7 NGSFLATGSYDGYARIW 23
N + + + D + W
Sbjct: 279 NETTIVSAGQDSNIKFW 295
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 48.7 bits (114), Expect = 2e-08
Identities = 7/59 (11%), Positives = 19/59 (32%)
Query: 7 NGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65
G + + D W + + + + + YI++ DK +++
Sbjct: 276 CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 45.2 bits (105), Expect = 5e-07
Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 35 QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSN-TSF 93
H+ + +LK+ G + +S G D W G Q S+ L D +
Sbjct: 263 LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYI 321
Query: 94 ASCSTDQHIHVCKL 107
+ S D+ V ++
Sbjct: 322 VTGSGDKKATVYEV 335
Score = 34.4 bits (77), Expect = 0.003
Identities = 7/126 (5%), Positives = 24/126 (19%), Gaps = 6/126 (4%)
Query: 4 SRNNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTII 63
+ + D + + H + A+ + ++ + G +
Sbjct: 18 TADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKV 76
Query: 64 WDAASGQCEQ-----QFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEG 118
WD + + + + + +
Sbjct: 77 WDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAE 136
Query: 119 HTRVYY 124
T
Sbjct: 137 LTSSAP 142
Score = 31.3 bits (69), Expect = 0.027
Identities = 16/116 (13%), Positives = 34/116 (29%), Gaps = 2/116 (1%)
Query: 13 TGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCE 72
TG D R W + IF+L + G ++ + + +
Sbjct: 200 TGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV-NKPDK 258
Query: 73 QQFSFHSAPALDVDWQSNTS-FASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLAM 127
Q H + L + + F S D ++ + + + + V +
Sbjct: 259 YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 314
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 47.6 bits (111), Expect = 7e-08
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Query: 30 KSTLGQHKGPIF-ALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQ 88
++TL H + L++ NY+++ DK ++D+ + + Q S H + +
Sbjct: 5 RTTLRGHMTSVITCLQFE--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA 62
Query: 89 SNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYY 124
S STD+ + V + FEGH
Sbjct: 63 HGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR 98
Score = 46.0 bits (107), Expect = 2e-07
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 5/120 (4%)
Query: 7 NGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65
+++ TG+ D R++ + + L H G ++ALK+ G ++S D+T +WD
Sbjct: 22 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-GGILVSGSTDRTVRVWD 80
Query: 66 AASGQCEQQFSFHSAPALDVDWQSNTSF---ASCSTDQHIHVCKLHSDKPVKSFEGHTRV 122
G C F H++ +D + + S D +HV KL + V
Sbjct: 81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 140
Score = 41.4 bits (95), Expect = 1e-05
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Query: 35 QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQ-FSFHSAPALDVDWQSNTSF 93
H + A+ + IL +G + I++ SG+ + V+++ T
Sbjct: 279 YHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLV 338
Query: 94 ASCSTDQHIHV 104
A+ D +
Sbjct: 339 AAVEKDGQSFL 349
Score = 33.7 bits (75), Expect = 0.003
Identities = 7/65 (10%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 3 SSRNNGSFLATGSYDGYARIW--TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKT 60
+ + + L +GS + I+ S + + + + I+++ + + + + D
Sbjct: 289 TFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQ 346
Query: 61 TIIWD 65
+ +
Sbjct: 347 SFLEI 351
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 46.7 bits (109), Expect = 1e-07
Identities = 15/101 (14%), Positives = 29/101 (28%), Gaps = 1/101 (0%)
Query: 24 TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPAL 83
+ L H + GN I+S D T +W A +G+C + H+
Sbjct: 3 RGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW 61
Query: 84 DVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYY 124
+ N + + + + + V
Sbjct: 62 SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 102
Score = 41.7 bits (96), Expect = 6e-06
Identities = 17/115 (14%), Positives = 34/115 (29%), Gaps = 4/115 (3%)
Query: 7 NGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65
G+ + +GS D ++W G TL H G +++ + S +
Sbjct: 26 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 85
Query: 66 AASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120
+ + S S D + V + + + + GH
Sbjct: 86 ---TGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHV 137
Score = 41.0 bits (94), Expect = 1e-05
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 7 NGSFLATGSYDGYARIWTSD-GSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65
+G + +GS D R+W + G+ TL H+ ++ N ++S D T IWD
Sbjct: 186 DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWD 243
Query: 66 AASGQCEQQFSFHSAPALDVDWQS--NTSFASCSTDQHIHVCKLHSDKPVKSFEGH 119
+GQC Q + V + S D + + L + + +++
Sbjct: 244 IKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTL 299
Score = 38.3 bits (87), Expect = 1e-04
Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 7/109 (6%)
Query: 7 NGSFLATGSYDGYARIW--TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIW 64
+ L +G+ D +IW + L++ G +K N+++++ D T +W
Sbjct: 226 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 285
Query: 65 DAASGQCEQQFSF-----HSAPALDVDWQSNTSFASCSTDQHIHVCKLH 108
D +G+ + + + + + KL
Sbjct: 286 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLL 334
Score = 34.8 bits (78), Expect = 0.002
Identities = 20/112 (17%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 9 SFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAA 67
+ +G+YD ++W + TL H +++L+++ G +++S +D + +WD
Sbjct: 148 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVE 205
Query: 68 SGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGH 119
+G C + H + ++ + N S + D + + + + + +++ +G
Sbjct: 206 TGNCIHTLTGHQSLTSGMELKDNI-LVSGNADSTVKIWDIKTGQCLQTLQGP 256
Score = 33.2 bits (74), Expect = 0.006
Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 10/69 (14%)
Query: 7 NGSFLATGSYDGYARIW-TSDGSLKSTL-----GQHKGPIFALKWNKRGNYILSAGVDKT 60
N +F+ T S DG ++W G L G G ++ ++ + + T
Sbjct: 269 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 328
Query: 61 T----IIWD 65
++ D
Sbjct: 329 EETKLLVLD 337
Score = 29.8 bits (65), Expect = 0.077
Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Query: 45 WNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHV 104
G ++S D +WD + C H+ + + S S D I V
Sbjct: 143 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH-VVSGSLDTSIRV 201
Query: 105 CKLHSDKPVKSFEGHTRV 122
+ + + + GH +
Sbjct: 202 WDVETGNCIHTLTGHQSL 219
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 42.5 bits (98), Expect = 4e-06
Identities = 9/73 (12%), Positives = 19/73 (26%), Gaps = 3/73 (4%)
Query: 36 HKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSF---HSAPALDVDWQSNTS 92
K I +K + +L D + ++ + P L ++ NT
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTD 69
Query: 93 FASCSTDQHIHVC 105
+
Sbjct: 70 LQIYVGTVQGEIL 82
Score = 37.9 bits (86), Expect = 1e-04
Identities = 16/132 (12%), Positives = 39/132 (29%), Gaps = 17/132 (12%)
Query: 1 MQSSRNNGSFLATGSYDGYARIWTSDGSLK----------------STLGQHKGPIFALK 44
+ A S DG + D P+ +++
Sbjct: 199 VALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIE 258
Query: 45 WNKRGNYILSAGVDKTTIIWDAASGQCEQQFS-FHSAPALDVDWQSNTSFASCSTDQHIH 103
++ R ++ +AG D W+ + + + F+ F+ + + N + S D
Sbjct: 259 FSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKT 318
Query: 104 VCKLHSDKPVKS 115
+ + +
Sbjct: 319 NAAIDQTIELNA 330
Score = 37.1 bits (84), Expect = 3e-04
Identities = 14/103 (13%), Positives = 31/103 (30%), Gaps = 4/103 (3%)
Query: 7 NGSFLATGSYDGYARIWTSDGSLKS----TLGQHKGPIFALKWNKRGNYILSAGVDKTTI 62
+ S L S+DG ++ D K+ ++K P+ + + + G + I
Sbjct: 22 SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI 81
Query: 63 IWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVC 105
+ G Q ++ L + +
Sbjct: 82 LKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 41.8 bits (96), Expect = 6e-06
Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Query: 45 WNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP----ALDVDWQSNTSFASCSTDQ 100
+ G D T +WD + +C Q+++ + V N S S D
Sbjct: 259 SWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 318
Query: 101 HIHVCKL 107
++ +L
Sbjct: 319 TLNFYEL 325
Score = 35.3 bits (79), Expect = 0.001
Identities = 11/69 (15%), Positives = 20/69 (28%), Gaps = 4/69 (5%)
Query: 1 MQSSRNNGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWN---KRGNYILSAG 56
S + AT D R+W + K + + I+S
Sbjct: 256 FALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS 315
Query: 57 VDKTTIIWD 65
+D T ++
Sbjct: 316 LDGTLNFYE 324
Score = 30.3 bits (66), Expect = 0.067
Identities = 12/127 (9%), Positives = 27/127 (21%), Gaps = 6/127 (4%)
Query: 4 SRNNGSFLATGSYDGYARIWTSDGS----LKSTLGQHKGPIFALKW--NKRGNYILSAGV 57
+ + R S + G + +K+ K Y+ S
Sbjct: 26 DPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE 85
Query: 58 DKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFE 117
I+W + + V + + + + V D
Sbjct: 86 SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS 145
Query: 118 GHTRVYY 124
+
Sbjct: 146 WDSGNSL 152
Score = 26.8 bits (57), Expect = 0.79
Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 11/117 (9%)
Query: 3 SSRNNGSFLATGSYDGYARI---------WTSDGSLKSTLGQHKGPIFALKWNKRGNYIL 53
S +L +G G + + + ++KS GPI + W+ G +
Sbjct: 72 SPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 131
Query: 54 --SAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLH 108
G D + SG + S HS + + S + V
Sbjct: 132 VVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQ 188
Score = 26.4 bits (56), Expect = 1.1
Identities = 9/51 (17%), Positives = 16/51 (31%)
Query: 70 QCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120
E + W + FA+ D I V + + K V+ +
Sbjct: 243 YIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDK 293
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 41.8 bits (96), Expect = 6e-06
Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 31 STLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSN 90
+ ++ L+++ I+S D T IWD + +C++ + H+ L + +
Sbjct: 9 HCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER 66
Query: 91 TSFASCSTDQHIHVC 105
S
Sbjct: 67 VIITGSSDSTVRVWD 81
Score = 37.5 bits (85), Expect = 2e-04
Identities = 17/107 (15%), Positives = 28/107 (26%), Gaps = 11/107 (10%)
Query: 7 NGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA 66
+ +GS D R+W + I+S D +WD
Sbjct: 187 RDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 245
Query: 67 ASG---------QCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHV 104
+ C + HS + + S S D I +
Sbjct: 246 VAALDPRAPAGTLCLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILI 291
Score = 37.5 bits (85), Expect = 2e-04
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 10 FLATGSYDGYARIW----------TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDK 59
+ +G+YDG ++W + TL +H G +F L+++ I+S+ D
Sbjct: 230 RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDD 287
Query: 60 TTIIWD 65
T +IWD
Sbjct: 288 TILIWD 293
Score = 36.0 bits (81), Expect = 6e-04
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 7 NGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWN 46
+ + +G D +IW + K L H G + L+++
Sbjct: 24 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD 64
Score = 34.4 bits (77), Expect = 0.002
Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 14/125 (11%)
Query: 15 SYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQ 73
S D ++W TS TL HK I L++ ++S D T +WD G C +
Sbjct: 155 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR 212
Query: 74 QFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHS---------DKPVKSFEGHT-RVY 123
H N S + D I V L + +++ H+ RV+
Sbjct: 213 VLEGHEELV-RCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF 271
Query: 124 YLAMD 128
L D
Sbjct: 272 RLQFD 276
Score = 29.0 bits (63), Expect = 0.13
Identities = 16/102 (15%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 23 WTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPA 82
+D +L+ L H+ + + ++ + S D+T +W+ ++ + + + H
Sbjct: 124 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGI 181
Query: 83 LDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYY 124
+ + + S S+D I + + ++ EGH +
Sbjct: 182 ACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 222
Score = 27.5 bits (59), Expect = 0.49
Identities = 9/51 (17%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Query: 70 QCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120
Q S S + + S D I + ++ + + GHT
Sbjct: 6 QRIHCRSETSKGVYCLQYDDQK-IVSGLRDNTIKIWDKNTLECKRILTGHT 55
Score = 25.6 bits (54), Expect = 1.9
Identities = 4/17 (23%), Positives = 8/17 (47%)
Query: 7 NGSFLATGSYDGYARIW 23
+ + + S+D IW
Sbjct: 276 DEFQIVSSSHDDTILIW 292
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 41.1 bits (94), Expect = 9e-06
Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 1 MQSSRNNGSFLATGSYDGYARIW--TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVD 58
+ATGS D I+ + L HK + L W + ++S+G D
Sbjct: 220 ANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET-PSTLVSSGAD 278
Query: 59 KTTIIWD 65
W+
Sbjct: 279 ACIKRWN 285
Score = 36.1 bits (81), Expect = 6e-04
Identities = 8/71 (11%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Query: 35 QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS-GQCEQQFSFHSAPALDVDWQSNTSF 93
A + + + + +D I+ + + + H ++ W++ ++
Sbjct: 213 WKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTL 272
Query: 94 ASCSTDQHIHV 104
S D I
Sbjct: 273 VSSGADACIKR 283
Score = 34.5 bits (77), Expect = 0.002
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 32 TLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNT 91
T+ H I AL N ++S D + W ++S + HS + +D
Sbjct: 8 TISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQD-----HSNLIVSLDNSKAQ 58
Query: 92 SFASCSTDQHIHVCKLH 108
++S S D + V +
Sbjct: 59 EYSSISWDDTLKVNGIT 75
Score = 29.2 bits (63), Expect = 0.13
Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Query: 9 SFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAAS 68
+ L +GSYDG W S S H I +L +K Y + D +
Sbjct: 22 NPLISGSYDGRIMEW----SSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKH 77
Query: 69 GQCEQQFSFHSAP 81
Q +
Sbjct: 78 EFGSQPKVASANN 90
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 40.7 bits (93), Expect = 1e-05
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 35 QHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA---PALDVDWQSNT 91
H G +F L W+ G I SA DKT IW+ A+ + E+ + L + W +
Sbjct: 236 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW-TKQ 294
Query: 92 SFASCSTDQHIHV 104
+ S S + I+
Sbjct: 295 ALVSISANGFINF 307
Score = 39.1 bits (89), Expect = 6e-05
Identities = 9/67 (13%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 1 MQSSRNNGSFLATGSYDGYARIW-TSDGSLKSTL-GQHKGPIFALKWNKRGNYILSAGVD 58
+ +G+ +A+ S D +IW + ++ T+ + L ++S +
Sbjct: 243 GLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 302
Query: 59 KTTIIWD 65
+
Sbjct: 303 GFINFVN 309
Score = 36.0 bits (81), Expect = 5e-04
Identities = 12/102 (11%), Positives = 23/102 (22%)
Query: 7 NGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDA 66
G + + + + +H K + G Y S V IWD
Sbjct: 28 AGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT 87
Query: 67 ASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLH 108
+ + D ++ + H
Sbjct: 88 TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 129
Score = 26.8 bits (57), Expect = 0.79
Identities = 10/62 (16%), Positives = 23/62 (37%)
Query: 70 QCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHTRVYYLAMDL 129
+ + + T AS S D+ I + + + K K+ TR+ + +
Sbjct: 230 DSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 289
Query: 130 LF 131
++
Sbjct: 290 IW 291
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 39.8 bits (91), Expect = 3e-05
Identities = 6/76 (7%), Positives = 19/76 (25%), Gaps = 3/76 (3%)
Query: 6 NNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65
++ G + + + K + L+ + ++ D +
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVKTR---KVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFP 342
Query: 66 AASGQCEQQFSFHSAP 81
+ E+ P
Sbjct: 343 LEKPEDERTVETDKRP 358
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 39.3 bits (90), Expect = 5e-05
Identities = 6/76 (7%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Query: 6 NNGSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWD 65
G + A+ L + + ++K+G+ + G +++
Sbjct: 261 PKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTY-YCVAFDKKGDKLYLGGTFNDLAVFN 319
Query: 66 AASGQCEQQFSFHSAP 81
+ + +
Sbjct: 320 PDTLEKVKNIKLPGGD 335
Score = 31.2 bits (69), Expect = 0.024
Identities = 10/95 (10%), Positives = 21/95 (22%), Gaps = 3/95 (3%)
Query: 7 NGSFLATGSYDGYARIW--TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTI-I 63
++ +Y + SD KS + K I
Sbjct: 7 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 66
Query: 64 WDAASGQCEQQFSFHSAPALDVDWQSNTSFASCST 98
D + + + S P + + +
Sbjct: 67 IDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK 101
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 38.7 bits (88), Expect = 7e-05
Identities = 14/139 (10%), Positives = 34/139 (24%), Gaps = 30/139 (21%)
Query: 7 NGSFLATGSYDGYARIW-TSDGSLKSTLGQ------HKGPIFAL-------KWNKRGNYI 52
SF + S DGY ++W ++ + HK + + + +
Sbjct: 23 CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 82
Query: 53 LSAGVDKTTIIWDAASGQCEQQFSFHSAPAL----------------DVDWQSNTSFASC 96
+ + + ++ F L D + +
Sbjct: 83 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT 142
Query: 97 STDQHIHVCKLHSDKPVKS 115
++ K H +
Sbjct: 143 DVKGTTYIWKFHPFADESN 161
Score = 36.0 bits (81), Expect = 7e-04
Identities = 20/141 (14%), Positives = 40/141 (28%), Gaps = 34/141 (24%)
Query: 2 QSSRNNGSFLATGSYDGYARIWTSDGSLKS-----------TLGQHKGPIFALKWNKRGN 50
+ +AT S+ G + ++ K +ALKW +
Sbjct: 73 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 132
Query: 51 -----YILSAGVDKTTIIWDA-ASGQCEQQFSFHSAPALD-----------------VDW 87
+++ V TT IW + + +P L+ VD
Sbjct: 133 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI 192
Query: 88 QSNTSFASCSTDQHIHVCKLH 108
A+ + + + +L
Sbjct: 193 SERGLIATGFNNGTVQISELS 213
Score = 35.6 bits (80), Expect = 8e-04
Identities = 12/61 (19%), Positives = 20/61 (32%)
Query: 21 RIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSA 80
+ T H + +L +N G + SAG D WD + + + H
Sbjct: 273 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCD 332
Query: 81 P 81
Sbjct: 333 D 333
Score = 30.2 bits (66), Expect = 0.071
Identities = 20/111 (18%), Positives = 33/111 (29%), Gaps = 19/111 (17%)
Query: 1 MQSSRNNGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPI----FALKWNKRGNYILSA 55
S ++G L + +DG R W +TL H I L ++ G+ +
Sbjct: 294 SLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP 353
Query: 56 GVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASCSTDQHIHVCK 106
GV + G + N S D+ I +
Sbjct: 354 GVFD---VKFLKKGWRSGMGA-----------DLNESLCCVCLDRSIRWFR 390
Score = 27.9 bits (60), Expect = 0.34
Identities = 15/139 (10%), Positives = 42/139 (30%), Gaps = 24/139 (17%)
Query: 6 NNGSFLATGSYDGYARIWT-------SDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVD 58
+ +ATG +G +I + + ++ + I ++K++ +G+ + A
Sbjct: 193 SERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 252
Query: 59 KTTIIWDAASGQCEQQFSFHSAPALDV-----------------DWQSNTSFASCSTDQH 101
+ + ++ S P S + S D
Sbjct: 253 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK 312
Query: 102 IHVCKLHSDKPVKSFEGHT 120
+ + + + + + H
Sbjct: 313 LRFWDVKTKERITTLNMHC 331
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 35.2 bits (79), Expect = 0.001
Identities = 5/69 (7%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Query: 19 YARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFH 78
+ + +++ + G+ + G +DA + + + Q
Sbjct: 262 LESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320
Query: 79 SAPALDVDW 87
++ +
Sbjct: 321 GNASMSLAS 329
Score = 33.2 bits (74), Expect = 0.006
Identities = 9/79 (11%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 50 NYILSAGVDKTTIIWDAASGQCEQQFSFHSAP----ALDVDWQSNTSFASCSTDQHIHVC 105
+YIL+ ++ D ++ + A V ++A+ + + +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 106 KLHSDKPVKSFEGHTRVYY 124
L + + + + T
Sbjct: 62 DLVTGETLGRIDLSTPEER 80
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 31.3 bits (69), Expect = 0.028
Identities = 10/76 (13%), Positives = 24/76 (31%), Gaps = 4/76 (5%)
Query: 6 NNGSFLATGSYDGYARIW-TSDGSLKSTLGQHKGPIFALKWNKRGNYIL--SAGVDKTTI 62
+ + + + G + ++ ++ +L + DKT
Sbjct: 268 DQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEI-DSINVSQDEKPLLYALSTGDKTLY 326
Query: 63 IWDAASGQCEQQFSFH 78
I DA SG+ + +
Sbjct: 327 IHDAESGEELRSVNQL 342
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 31.0 bits (68), Expect = 0.032
Identities = 8/67 (11%), Positives = 20/67 (29%), Gaps = 2/67 (2%)
Query: 16 YDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYIL-SAGVDKTTIIWDAASGQCEQQ 74
++ + I T + + + P + G + + T + D A+
Sbjct: 223 FNTVSMIDTGTNKITARIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITAT 281
Query: 75 FSFHSAP 81
+ P
Sbjct: 282 MAVGKNP 288
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 30.3 bits (67), Expect = 0.063
Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Query: 12 ATGSYDGYARIWTSDGSLKSTLGQ--HKGPIFALKWNKRGNYIL--SAGVDKTTIIWDAA 67
+ + S+ T G + A+ + G ++ + I+DAA
Sbjct: 286 SRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345
Query: 68 SGQCEQQFSFHSAP 81
S Q + P
Sbjct: 346 SDQDQSSVELDKGP 359
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 29.2 bits (64), Expect = 0.14
Identities = 5/73 (6%), Positives = 16/73 (21%), Gaps = 9/73 (12%)
Query: 8 GSFLATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYIL--SAGVDKTTIIWD 65
Q P+ +++ ++ + ++ D
Sbjct: 249 TQVWVYDLKSKQRVARWDLA------QQKVEPLVSIQVSEDDKPLFYGLTATSDL-VVMD 301
Query: 66 AASGQCEQQFSFH 78
A +G +
Sbjct: 302 ARTGALQHVEKQI 314
Score = 28.0 bits (61), Expect = 0.36
Identities = 12/114 (10%), Positives = 20/114 (17%), Gaps = 19/114 (16%)
Query: 24 TSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG----------VDKTTIIWDAASGQCEQ 73
L + GP FA + A I D +
Sbjct: 5 ADAKKLLGQIDGGFGPGFA--IAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAG 62
Query: 74 QFSFHSAPA-------LDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGHT 120
+ + A + V + + E T
Sbjct: 63 EIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDT 116
Score = 25.3 bits (54), Expect = 2.3
Identities = 5/67 (7%), Positives = 15/67 (22%), Gaps = 9/67 (13%)
Query: 63 IWDAASGQCEQQFSFHSAPALDVDWQSNTSFASC---------STDQHIHVCKLHSDKPV 113
++DA + + Q P + S + + + + +
Sbjct: 2 VYDADAKKLLGQIDGGFGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHA 61
Query: 114 KSFEGHT 120
Sbjct: 62 GEIVIPA 68
>d1ynaa_ b.29.1.11 (A:) Xylanase II {Thermomyces lanuginosus
[TaxId: 5541]}
Length = 194
Score = 27.3 bits (61), Expect = 0.53
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 12 ATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYI----LSAGVDKTTIIWDA 66
+ G +DGY W SDG ++T +G + + W GN + + G++ I ++
Sbjct: 6 SEGWHDGYYYSWWSDGGAQATYTNLEGGTYEISWGDGGNLVGGKGWNPGLNARAIHFEG 64
>d1n7va_ b.126.1.1 (A:) Adsorption protein p2 {Bacteriophage prd1
[TaxId: 10658]}
Length = 555
Score = 27.0 bits (59), Expect = 0.70
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 28 SLKSTLGQHKGPIFALKWNKRGNYILSAGVDKTTII 63
SL +LG K I N G + +S G+DKTT++
Sbjct: 394 SLPLSLGGSKAAIDEWVANNCGLFPMSGGLDKTTLL 429
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 26.8 bits (58), Expect = 0.88
Identities = 9/77 (11%), Positives = 20/77 (25%), Gaps = 2/77 (2%)
Query: 42 ALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAP-ALDVDWQSNTSFASCSTDQ 100
+ + ++ + D S + + A + D
Sbjct: 25 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRY-LLVIGRDA 83
Query: 101 HIHVCKLHSDKPVKSFE 117
I + L + +P K E
Sbjct: 84 RIDMIDLWAKEPTKVAE 100
Score = 23.8 bits (50), Expect = 8.5
Identities = 6/84 (7%), Positives = 18/84 (21%), Gaps = 6/84 (7%)
Query: 7 NGSFLATGSYDGYARIW---TSDGSLKSTLGQHKGP---IFALKWNKRGNYILSAGVDKT 60
+G +L D + + + + + + Y ++
Sbjct: 72 SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP 131
Query: 61 TIIWDAASGQCEQQFSFHSAPALD 84
+Q +D
Sbjct: 132 QFAIMDGETLEPKQIVSTRGMTVD 155
>d1xnka1 b.29.1.11 (A:1-191) Xylanase II {Chaetomium thermophilum
[TaxId: 209285]}
Length = 191
Score = 26.2 bits (58), Expect = 1.2
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 12 ATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYI----LSAGVDKTTIIWDA 66
ATG+++GY + +DG G +++ W+ GN++ + G D I + A
Sbjct: 7 ATGTHNGYYYSFWTDGQGNIRFNLESGGQYSVTWSGNGNWVGGKGWNPGTDNRVINYTA 65
>d1m4wa_ b.29.1.11 (A:) Xylanase II {Nonomuraea flexuosa [TaxId:
103836]}
Length = 197
Score = 25.8 bits (57), Expect = 1.5
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 12 ATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG 56
TG +GY + +D ++ H G ++ W GN++ G
Sbjct: 8 QTGYDNGYFYSFWTDAPGTVSMTLHSGGSYSTSWRNTGNFVAGKG 52
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 25.9 bits (56), Expect = 1.8
Identities = 6/76 (7%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Query: 37 KGPIFALKWNKRGNYILSAGVDKTTIIWDAASGQCEQQFSFHSAPALDVDWQSNTSFASC 96
+ + + ++ + D ++ + + A + S
Sbjct: 22 TQQMNDW--DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVI 79
Query: 97 STDQHIHVCKLHSDKP 112
D +++ L +P
Sbjct: 80 GRDGKVNMIDLWMKEP 95
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Length = 263
Score = 25.6 bits (55), Expect = 2.1
Identities = 8/56 (14%), Positives = 15/56 (26%), Gaps = 1/56 (1%)
Query: 74 QFSFHSAPALDVDWQSNTSFASCSTDQHIHVCKLHSDKPVKSFEGH-TRVYYLAMD 128
L D + + ++ I LH +P +A+D
Sbjct: 32 HIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALD 87
>d2dk5a1 a.4.5.85 (A:8-85) DNA-directed RNA polymerase III subunit
RPC6, RPO3F {Human (Homo sapiens) [TaxId: 9606]}
Length = 78
Score = 24.3 bits (53), Expect = 2.2
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 111 KPVKSFEGHTRVYYLAMDL 129
K VKS + Y+ +L
Sbjct: 60 KAVKSVAASKKKVYMLYNL 78
>d1h4ga_ b.29.1.11 (A:) Xylanase II {Bacillus agaradhaerens
[TaxId: 76935]}
Length = 206
Score = 25.1 bits (55), Expect = 2.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 12 ATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG 56
+ G++DGY + D T+ + G F+ +WN N + G
Sbjct: 7 SIGNHDGYDYEFWKDSGGSGTMILNHGGTFSAQWNNVNNILFRKG 51
>d1te1b_ b.29.1.11 (B:) Xylanase II {Penicillium funiculosum
[TaxId: 28572]}
Length = 190
Score = 25.0 bits (55), Expect = 2.7
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 12 ATGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG 56
TG+ +GY + ++G + T +++ W G++ G
Sbjct: 7 QTGTNNGYYYSFWTNGGGEVTYTNGDNGEYSVTWVDCGDFTSGKG 51
>d1f5ja_ b.29.1.11 (A:) Xylanase II {Dictyoglomus thermophilum
[TaxId: 14]}
Length = 199
Score = 25.0 bits (55), Expect = 3.0
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 12 ATGSYDGYA-RIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG 56
A+G++DGY +W G+ T+ F+ +W+ N + G
Sbjct: 6 ASGTFDGYYYELWKDTGNTTMTVYT--QGRFSCQWSNINNALFRTG 49
>d2dfba1 b.29.1.11 (A:1-190) Xylanase II {Trichoderma reesei,
xynII [TaxId: 51453]}
Length = 190
Score = 24.6 bits (54), Expect = 4.2
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 13 TGSYDGYARIWTSDGSLKSTLGQHKGPIFALKWNKRGNYILSAG 56
TG +GY + +DG T G F++ W+ GN++ G
Sbjct: 7 TGYNNGYFYSYWNDGHGGVTYTNGPGGQFSVNWSNSGNFVGGKG 50
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.131 0.415
Gapped
Lambda K H
0.267 0.0484 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 479,402
Number of extensions: 18724
Number of successful extensions: 202
Number of sequences better than 10.0: 1
Number of HSP's gapped: 146
Number of HSP's successfully gapped: 115
Length of query: 131
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 55
Effective length of database: 1,364,116
Effective search space: 75026380
Effective search space used: 75026380
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (22.9 bits)