RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy3841
         (73 letters)



>d2fgca1 d.58.18.6 (A:105-187) Acetolactate synthase small
          subunit,  IlvH {Thermotoga maritima [TaxId: 2336]}
          Length = 83

 Score = 22.7 bits (49), Expect = 4.3
 Identities = 6/28 (21%), Positives = 12/28 (42%)

Query: 42 QHVYPIVLLIKFKSTKQIKEIKENCRFY 69
            V   + LIK +  +  +EI +    +
Sbjct: 5  NRVEREMALIKVRFDEDKQEIFQLVEIF 32


>d1yw6a1 c.56.5.7 (A:1-322) Succinylglutamate desuccinylase AstE
           {Escherichia coli [TaxId: 562]}
          Length = 322

 Score = 22.3 bits (47), Expect = 9.3
 Identities = 7/54 (12%), Positives = 14/54 (25%), Gaps = 1/54 (1%)

Query: 4   RFNHHGLNREEPGKKTNNINNAHVILDVSLAGVERLH-RQHVYPIVLLIKFKST 56
           R+ H  +NR   G+      +        L         Q    +   +   + 
Sbjct: 96  RYCHSDMNRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLDLHTA 149


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.138    0.411 

Gapped
Lambda     K      H
   0.267   0.0697    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 273,652
Number of extensions: 9439
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 3
Length of query: 73
Length of database: 2,407,596
Length adjustment: 41
Effective length of query: 32
Effective length of database: 1,844,666
Effective search space: 59029312
Effective search space used: 59029312
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (21.9 bits)