BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3842
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94511|NDUS1_DROME NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Drosophila melanogaster GN=ND75 PE=2 SV=3
Length = 731
Score = 140 bits (352), Expect = 3e-33, Method: Composition-based stats.
Identities = 57/66 (86%), Positives = 66/66 (100%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
MKGWR+KTNS++TR+AREGVMEFLL+NHPLDCPICDQGGECDLQDQ+MAFGSDRSRFTDI
Sbjct: 107 MKGWRIKTNSDLTRKAREGVMEFLLMNHPLDCPICDQGGECDLQDQAMAFGSDRSRFTDI 166
Query: 61 DFSGKR 66
+++GKR
Sbjct: 167 NYTGKR 172
Score = 109 bits (272), Expect = 5e-24, Method: Composition-based stats.
Identities = 45/50 (90%), Positives = 50/50 (100%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDIDFSGK 139
AREGVMEFLL+NHPLDCPICDQGGECDLQDQ+MAFGSDRSRFTDI+++GK
Sbjct: 122 AREGVMEFLLMNHPLDCPICDQGGECDLQDQAMAFGSDRSRFTDINYTGK 171
>sp|P15690|NDUS1_BOVIN NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Bos
taurus GN=NDUFS1 PE=1 SV=1
Length = 727
Score = 117 bits (293), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/66 (78%), Positives = 56/66 (84%), Gaps = 4/66 (6%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
MKGW + TNSE T++AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FGSDRSRF +
Sbjct: 97 MKGWNILTNSEKTKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLE- 155
Query: 61 DFSGKR 66
GKR
Sbjct: 156 ---GKR 158
Score = 95.1 bits (235), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/44 (90%), Positives = 41/44 (93%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FGSDRSRF +
Sbjct: 112 AREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLE 155
>sp|Q66HF1|NDUS1_RAT NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Rattus norvegicus GN=Ndufs1 PE=1 SV=1
Length = 727
Score = 116 bits (290), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/66 (77%), Positives = 56/66 (84%), Gaps = 4/66 (6%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
MKGW + TNSE +++AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FGSDRSRF +
Sbjct: 97 MKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLE- 155
Query: 61 DFSGKR 66
GKR
Sbjct: 156 ---GKR 158
Score = 95.5 bits (236), Expect = 9e-20, Method: Composition-based stats.
Identities = 40/44 (90%), Positives = 41/44 (93%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FGSDRSRF +
Sbjct: 112 AREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLE 155
>sp|Q91VD9|NDUS1_MOUSE NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus
musculus GN=Ndufs1 PE=1 SV=2
Length = 727
Score = 116 bits (290), Expect = 5e-26, Method: Composition-based stats.
Identities = 51/66 (77%), Positives = 56/66 (84%), Gaps = 4/66 (6%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
MKGW + TNSE +++AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FGSDRSRF +
Sbjct: 97 MKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLE- 155
Query: 61 DFSGKR 66
GKR
Sbjct: 156 ---GKR 158
Score = 95.5 bits (236), Expect = 9e-20, Method: Composition-based stats.
Identities = 40/44 (90%), Positives = 41/44 (93%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FGSDRSRF +
Sbjct: 112 AREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLE 155
>sp|P0CB68|NDUS1_PONPY NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Pongo pygmaeus GN=NDUFS1 PE=2 SV=1
Length = 727
Score = 114 bits (286), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/66 (75%), Positives = 56/66 (84%), Gaps = 4/66 (6%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
MKGW + TNSE +++AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 97 MKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE- 155
Query: 61 DFSGKR 66
GKR
Sbjct: 156 ---GKR 158
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/44 (88%), Positives = 41/44 (93%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 112 AREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE 155
>sp|Q4R6K9|NDUS1_MACFA NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Macaca fascicularis GN=NDUFS1 PE=2 SV=1
Length = 727
Score = 114 bits (286), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/66 (75%), Positives = 56/66 (84%), Gaps = 4/66 (6%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
MKGW + TNSE +++AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 97 MKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE- 155
Query: 61 DFSGKR 66
GKR
Sbjct: 156 ---GKR 158
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/44 (88%), Positives = 41/44 (93%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 112 AREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE 155
>sp|P28331|NDUS1_HUMAN NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Homo sapiens GN=NDUFS1 PE=1 SV=3
Length = 727
Score = 114 bits (286), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/66 (75%), Positives = 56/66 (84%), Gaps = 4/66 (6%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
MKGW + TNSE +++AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 97 MKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE- 155
Query: 61 DFSGKR 66
GKR
Sbjct: 156 ---GKR 158
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/44 (88%), Positives = 41/44 (93%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 112 AREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE 155
>sp|Q0MQG1|NDUS1_GORGO NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Gorilla gorilla gorilla GN=NDUFS1 PE=2 SV=1
Length = 727
Score = 114 bits (286), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/66 (75%), Positives = 56/66 (84%), Gaps = 4/66 (6%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
MKGW + TNSE +++AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 97 MKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE- 155
Query: 61 DFSGKR 66
GKR
Sbjct: 156 ---GKR 158
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/44 (88%), Positives = 41/44 (93%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 112 AREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE 155
>sp|Q0MQG2|NDUS1_PANTR NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pan
troglodytes GN=NDUFS1 PE=2 SV=1
Length = 727
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/66 (74%), Positives = 56/66 (84%), Gaps = 4/66 (6%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
MKGW + TNS+ +++AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 97 MKGWNILTNSKKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE- 155
Query: 61 DFSGKR 66
GKR
Sbjct: 156 ---GKR 158
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/44 (88%), Positives = 41/44 (93%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
AREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 112 AREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE 155
>sp|P0CB67|NDUS1_PONAB NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
OS=Pongo abelii GN=NDUFS1 PE=2 SV=1
Length = 727
Score = 112 bits (280), Expect = 6e-25, Method: Composition-based stats.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 4/66 (6%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
MKGW + TNSE +++AREGVME LL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 97 MKGWNILTNSEKSKKAREGVMELLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE- 155
Query: 61 DFSGKR 66
GKR
Sbjct: 156 ---GKR 158
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/44 (86%), Positives = 40/44 (90%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
AREGVME LL NHPLDCPICDQGGECDLQDQSM FG+DRSRF +
Sbjct: 112 AREGVMELLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLE 155
>sp|Q43644|NDUS1_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 1,
mitochondrial OS=Solanum tuberosum PE=2 SV=1
Length = 738
Score = 109 bits (272), Expect = 5e-24, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
+ G ++KT++ + ++AREGVMEFLL+NHPLDCPICDQGGECDLQDQSMAFGSDR RFT++
Sbjct: 133 LPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEM 192
Query: 61 DFS 63
S
Sbjct: 193 KRS 195
Score = 99.0 bits (245), Expect = 7e-21, Method: Composition-based stats.
Identities = 46/66 (69%), Positives = 51/66 (77%), Gaps = 4/66 (6%)
Query: 76 LSELSGKRESTCAP----AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
+ L G + T P AREGVMEFLL+NHPLDCPICDQGGECDLQDQSMAFGSDR RF
Sbjct: 130 MPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRF 189
Query: 132 TDIDFS 137
T++ S
Sbjct: 190 TEMKRS 195
>sp|Q9FGI6|NDUS1_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 1,
mitochondrial OS=Arabidopsis thaliana GN=EMB1467 PE=1
SV=2
Length = 748
Score = 108 bits (271), Expect = 7e-24, Method: Composition-based stats.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
+ G ++KT++ + ++AREGVMEFLL+NHPLDCPICDQGGECDLQDQSMAFGSDR RFT++
Sbjct: 139 LPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEM 198
Query: 61 DFS 63
S
Sbjct: 199 KRS 201
Score = 98.6 bits (244), Expect = 9e-21, Method: Composition-based stats.
Identities = 46/66 (69%), Positives = 51/66 (77%), Gaps = 4/66 (6%)
Query: 76 LSELSGKRESTCAP----AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
+ L G + T P AREGVMEFLL+NHPLDCPICDQGGECDLQDQSMAFGSDR RF
Sbjct: 136 MPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRF 195
Query: 132 TDIDFS 137
T++ S
Sbjct: 196 TEMKRS 201
>sp|P24918|NDUS1_NEUCR NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-78 PE=1 SV=2
Length = 744
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/64 (73%), Positives = 52/64 (81%), Gaps = 2/64 (3%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDIDF 62
G VKTNS +T +AREGVMEFLL NHPLDCPICDQGGECDLQDQSM +G DR RF ++
Sbjct: 103 GMVVKTNSPLTHKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMRYGGDRGRFHEV-- 160
Query: 63 SGKR 66
GKR
Sbjct: 161 GGKR 164
Score = 90.5 bits (223), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/45 (82%), Positives = 40/45 (88%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 134
AREGVMEFLL NHPLDCPICDQGGECDLQDQSM +G DR RF ++
Sbjct: 116 AREGVMEFLLANHPLDCPICDQGGECDLQDQSMRYGGDRGRFHEV 160
>sp|O21241|NDUS1_RECAM NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Reclinomonas
americana GN=NAD11 PE=3 SV=1
Length = 691
Score = 98.6 bits (244), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 48/57 (84%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 57
M ++ TN+ + ++AREGV+EFLLVNHPLDCPICDQGGECDLQD +M +GSDR RF
Sbjct: 67 MDNMKIFTNTPLVKKAREGVLEFLLVNHPLDCPICDQGGECDLQDLTMVYGSDRGRF 123
Score = 89.7 bits (221), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/42 (85%), Positives = 39/42 (92%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
AREGV+EFLLVNHPLDCPICDQGGECDLQD +M +GSDR RF
Sbjct: 82 AREGVLEFLLVNHPLDCPICDQGGECDLQDLTMVYGSDRGRF 123
>sp|P29915|NQO3_PARDE NADH-quinone oxidoreductase chain 3 OS=Paracoccus denitrificans
GN=nqo3 PE=1 SV=4
Length = 673
Score = 98.6 bits (244), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/54 (74%), Positives = 49/54 (90%)
Query: 6 VKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 59
++TNS M ++AREGVMEFLL+NHPLDCPICDQGGECDLQDQ+MA+G D SR+ +
Sbjct: 84 IRTNSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAMAYGVDFSRYRE 137
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/44 (81%), Positives = 41/44 (93%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
AREGVMEFLL+NHPLDCPICDQGGECDLQDQ+MA+G D SR+ +
Sbjct: 94 AREGVMEFLLINHPLDCPICDQGGECDLQDQAMAYGVDFSRYRE 137
>sp|Q37373|NDUS1_ACACA NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Acanthamoeba
castellanii GN=NAD11 PE=3 SV=1
Length = 675
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/58 (67%), Positives = 46/58 (79%)
Query: 6 VKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDIDFS 63
+ TN+ ++ARE V+EFLL NHPLDCPICDQGGECDLQDQS+ FGSDR RF + S
Sbjct: 74 IYTNTLKVKKARESVLEFLLANHPLDCPICDQGGECDLQDQSVVFGSDRGRFYEFKRS 131
Score = 89.0 bits (219), Expect = 7e-18, Method: Composition-based stats.
Identities = 37/48 (77%), Positives = 40/48 (83%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDIDFS 137
ARE V+EFLL NHPLDCPICDQGGECDLQDQS+ FGSDR RF + S
Sbjct: 84 ARESVLEFLLANHPLDCPICDQGGECDLQDQSVVFGSDRGRFYEFKRS 131
>sp|Q9ZCF6|NUOG_RICPR NADH-quinone oxidoreductase subunit G OS=Rickettsia prowazekii
(strain Madrid E) GN=nuoG PE=3 SV=1
Length = 675
Score = 93.6 bits (231), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 2 KGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 57
KG + T++ M ++AREGVMEFLL+NHPLDCPICDQGGECDLQDQ+ +G +RF
Sbjct: 68 KGMVIHTDTPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAFRYGKGTNRF 123
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 37/42 (88%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
AREGVMEFLL+NHPLDCPICDQGGECDLQDQ+ +G +RF
Sbjct: 82 AREGVMEFLLINHPLDCPICDQGGECDLQDQAFRYGKGTNRF 123
>sp|Q68VV2|NUOG_RICTY NADH-quinone oxidoreductase subunit G OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=nuoG PE=3 SV=1
Length = 675
Score = 92.0 bits (227), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 57
G + T++ M ++AREGVMEFLL+NHPLDCPICDQGGECDLQDQ+ +G +RF
Sbjct: 69 GMVIHTDTSMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAFRYGKGTNRF 123
Score = 84.0 bits (206), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/47 (72%), Positives = 38/47 (80%)
Query: 85 STCAPAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
S AREGVMEFLL+NHPLDCPICDQGGECDLQDQ+ +G +RF
Sbjct: 77 SMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAFRYGKGTNRF 123
>sp|Q4UK22|NUOG_RICFE NADH-quinone oxidoreductase subunit G OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=nuoG PE=3 SV=1
Length = 671
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 57
G + T++ M ++AREGVMEFLL+NHPLDCPICDQGGECDLQDQ+ +G +RF
Sbjct: 69 GMVIHTDTPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAFRYGKGTNRF 123
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/42 (78%), Positives = 37/42 (88%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
AREGVMEFLL+NHPLDCPICDQGGECDLQDQ+ +G +RF
Sbjct: 82 AREGVMEFLLINHPLDCPICDQGGECDLQDQAFRYGKGTNRF 123
>sp|Q1RKD2|NUOG_RICBR NADH-quinone oxidoreductase subunit G OS=Rickettsia bellii (strain
RML369-C) GN=nuoG PE=3 SV=1
Length = 681
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 57
G + T++ M ++AREGVMEFLLVNHPLDCPICDQGGECDLQDQ+ +G +RF
Sbjct: 69 GMVIHTDTPMVKKAREGVMEFLLVNHPLDCPICDQGGECDLQDQAFRYGKGTNRF 123
Score = 83.2 bits (204), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/42 (80%), Positives = 37/42 (88%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
AREGVMEFLLVNHPLDCPICDQGGECDLQDQ+ +G +RF
Sbjct: 82 AREGVMEFLLVNHPLDCPICDQGGECDLQDQAFRYGKGTNRF 123
>sp|Q92G92|NUOG_RICCN NADH-quinone oxidoreductase subunit G OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=nuoG PE=3 SV=2
Length = 671
Score = 89.7 bits (221), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 45/55 (81%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 57
G + T++ M ++AREGVMEFLL+NHPLDCPICDQGGEC+LQDQ+ +G +RF
Sbjct: 69 GMVIHTDTPMVKKAREGVMEFLLINHPLDCPICDQGGECNLQDQAFRYGKGTNRF 123
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
AREGVMEFLL+NHPLDCPICDQGGEC+LQDQ+ +G +RF
Sbjct: 82 AREGVMEFLLINHPLDCPICDQGGECNLQDQAFRYGKGTNRF 123
>sp|Q34312|NDUS1_DICDI NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Dictyostelium
discoideum GN=nad11 PE=3 SV=1
Length = 688
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 44/52 (84%)
Query: 6 VKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 57
++T + +AREGVMEFLL+NHPLDCPICDQGGECDLQ+Q++A+G D RF
Sbjct: 79 IETEIDEILKAREGVMEFLLINHPLDCPICDQGGECDLQEQTLAYGLDTGRF 130
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/42 (80%), Positives = 39/42 (92%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
AREGVMEFLL+NHPLDCPICDQGGECDLQ+Q++A+G D RF
Sbjct: 89 AREGVMEFLLINHPLDCPICDQGGECDLQEQTLAYGLDTGRF 130
>sp|Q2LCP5|NDUS1_DICCI NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Dictyostelium
citrinum GN=nad11 PE=3 SV=2
Length = 688
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/52 (67%), Positives = 44/52 (84%)
Query: 6 VKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 57
++T + +AREGVMEFLL+NHPLDCPICDQGGECDLQ+Q++A+G D RF
Sbjct: 79 IETEIDEILKAREGVMEFLLINHPLDCPICDQGGECDLQEQTIAYGLDTGRF 130
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 34/42 (80%), Positives = 39/42 (92%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
AREGVMEFLL+NHPLDCPICDQGGECDLQ+Q++A+G D RF
Sbjct: 89 AREGVMEFLLINHPLDCPICDQGGECDLQEQTIAYGLDTGRF 130
>sp|P95175|NUOG_MYCTU NADH-quinone oxidoreductase subunit G OS=Mycobacterium tuberculosis
GN=nuoG PE=3 SV=2
Length = 806
Score = 79.0 bits (193), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 43/55 (78%)
Query: 5 RVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 59
R + SE+ +A+ GVME LL+NHPLDCP+CD+GGEC LQ+Q+M+ G SRFT+
Sbjct: 88 RTQLTSEIADKAQHGVMELLLINHPLDCPMCDKGGECPLQNQAMSNGRTDSRFTE 142
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
A+ GVME LL+NHPLDCP+CD+GGEC LQ+Q+M+ G SRFT+
Sbjct: 99 AQHGVMELLLINHPLDCPMCDKGGECPLQNQAMSNGRTDSRFTE 142
>sp|P59962|NUOG_MYCBO NADH-quinone oxidoreductase subunit G OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=nuoG PE=3 SV=1
Length = 806
Score = 79.0 bits (193), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 43/55 (78%)
Query: 5 RVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 59
R + SE+ +A+ GVME LL+NHPLDCP+CD+GGEC LQ+Q+M+ G SRFT+
Sbjct: 88 RTQLTSEIADKAQHGVMELLLINHPLDCPMCDKGGECPLQNQAMSNGRTDSRFTE 142
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
A+ GVME LL+NHPLDCP+CD+GGEC LQ+Q+M+ G SRFT+
Sbjct: 99 AQHGVMELLLINHPLDCPMCDKGGECPLQNQAMSNGRTDSRFTE 142
>sp|Q9XAR0|NUOG_STRCO NADH-quinone oxidoreductase subunit G OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=nuoG PE=3 SV=1
Length = 843
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 3 GWRVKTN--SEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDI 60
G VKT S + +A+ GVME LL+NHPLDCP+CD+GGEC LQ+Q+M+ G SR
Sbjct: 89 GMVVKTQLTSPVAEKAQHGVMELLLINHPLDCPVCDKGGECPLQNQAMSHGQSDSR---- 144
Query: 61 DFSGKRWGYLREKLFLSELSGKRESTCAPAR 91
F GK+ Y + +++ RE AR
Sbjct: 145 -FEGKKRTYEKPVPISTQVLLDRERCVLCAR 174
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
A+ GVME LL+NHPLDCP+CD+GGEC LQ+Q+M+ G SRF
Sbjct: 104 AQHGVMELLLINHPLDCPVCDKGGECPLQNQAMSHGQSDSRF 145
>sp|P56914|NUOG2_RHIME NADH-quinone oxidoreductase subunit G 2 OS=Rhizobium meliloti
(strain 1021) GN=nuoG2 PE=3 SV=2
Length = 853
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 59
G V+TN+ + R +++ LL NHPLDCPICD+GGEC+LQD MA+G SRF D
Sbjct: 69 GMVVRTNTPLIEETRSSMLDMLLANHPLDCPICDKGGECELQDMVMAYGPGESRFRD 125
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTD 133
R +++ LL NHPLDCPICD+GGEC+LQD MA+G SRF D
Sbjct: 83 RSSMLDMLLANHPLDCPICDKGGECELQDMVMAYGPGESRFRD 125
>sp|Q56223|NQO3_THET8 NADH-quinone oxidoreductase subunit 3 OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=nqo3 PE=1 SV=2
Length = 783
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFG 51
G V T S++ R A+ G++EF L+NHPLDCP CD+GG C+LQD+++ +G
Sbjct: 90 GMVVDTLSDVVREAQAGMVEFTLLNHPLDCPTCDKGGACELQDRTVEYG 138
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 31/36 (86%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFG 125
A+ G++EF L+NHPLDCP CD+GG C+LQD+++ +G
Sbjct: 103 AQAGMVEFTLLNHPLDCPTCDKGGACELQDRTVEYG 138
>sp|Q89AU1|NUOG_BUCBP NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=nuoG PE=3 SV=1
Length = 907
Score = 64.7 bits (156), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
+ G V T+ +++R R+G++E L++NHP DCPIC++GG C LQD ++ G R RFT
Sbjct: 72 LDGMIVSTSDKISRNFRKGIIELLMLNHPHDCPICEEGGSCHLQDMTVMAGHTVRRYRFT 131
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
R+G++E L++NHP DCPIC++GG C LQD ++ G R RFT
Sbjct: 88 RKGIIELLMLNHPHDCPICEEGGSCHLQDMTVMAGHTVRRYRFT 131
>sp|Q7UC56|NUOG_SHIFL NADH-quinone oxidoreductase subunit G OS=Shigella flexneri GN=nuoG
PE=3 SV=3
Length = 908
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
G + + E ++ RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 74 GTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 88 RESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
>sp|P33602|NUOG_ECOLI NADH-quinone oxidoreductase subunit G OS=Escherichia coli (strain
K12) GN=nuoG PE=1 SV=4
Length = 908
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
G + + E ++ RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 74 GTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 88 RESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
>sp|P0A1Y4|NUOG_SALTY NADH-quinone oxidoreductase subunit G OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=nuoG PE=3 SV=2
Length = 908
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
G + + E ++ RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 74 GTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 88 RESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
>sp|P0A1Y5|NUOG_SALTI NADH-quinone oxidoreductase subunit G OS=Salmonella typhi GN=nuoG
PE=3 SV=2
Length = 908
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
G + + E ++ RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 74 GTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 88 RESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
>sp|Q8FFJ9|NUOG_ECOL6 NADH-quinone oxidoreductase subunit G OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=nuoG PE=3 SV=3
Length = 908
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
G + + E ++ RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 74 GTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 88 RESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
>sp|Q8XCX2|NUOG_ECO57 NADH-quinone oxidoreductase subunit G OS=Escherichia coli O157:H7
GN=nuoG PE=3 SV=3
Length = 908
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
G + + E ++ RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 74 GTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 88 RESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
>sp|Q88FH2|NUOG_PSEPK NADH-quinone oxidoreductase subunit G OS=Pseudomonas putida (strain
KT2440) GN=nuoG PE=3 SV=1
Length = 904
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
G + + E ++ R V+E+L+ NHP DCP+C++GG C LQD ++ G + R RFT
Sbjct: 74 GTWISIDDEESKAFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFT 131
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
R V+E+L+ NHP DCP+C++GG C LQD ++ G + R RFT
Sbjct: 88 RASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFT 131
>sp|Q9I0J6|NUOG_PSEAE NADH-quinone oxidoreductase subunit G OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=nuoG PE=3 SV=1
Length = 905
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 6 VKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
+ E ++ R V+E+L+ NHP DCP+C++GG C LQD ++ G + R RFT
Sbjct: 77 ISIEDEEAKQFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFT 131
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
R V+E+L+ NHP DCP+C++GG C LQD ++ G + R RFT
Sbjct: 88 RASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFT 131
>sp|Q8ZDL2|NUOG_YERPE NADH-quinone oxidoreductase subunit G OS=Yersinia pestis GN=nuoG
PE=3 SV=1
Length = 914
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 84 ESTCAPAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
+S RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 81 DSEAKAFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
Score = 55.5 bits (132), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 17 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
RE V+E+L+ NHP DCP+C++GG C LQD ++ G R RFT
Sbjct: 88 RESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFT 131
>sp|Q8K9Y2|NUOG_BUCAP NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=nuoG PE=3 SV=1
Length = 910
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 1 MKGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSM 48
+ G + N + +++ R ++E LL NHP DCP+C++GG C LQD ++
Sbjct: 72 IDGTIISINDDTSKKFRSNIVELLLTNHPHDCPVCEEGGNCHLQDMTV 119
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 84 ESTCAPAREGVMEFLLVNHPLDCPICDQGGECDLQDQSM 122
+ T R ++E LL NHP DCP+C++GG C LQD ++
Sbjct: 81 DDTSKKFRSNIVELLLTNHPHDCPVCEEGGNCHLQDMTV 119
>sp|Q9KGW3|NUOG_PSEFL NADH-quinone oxidoreductase subunit G OS=Pseudomonas fluorescens
GN=nuoG PE=2 SV=1
Length = 904
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
G + + E + R V+E+L+ NHP DCP+C++GG C LQD ++ G + R RFT
Sbjct: 74 GSWISIDDEEAKVFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFT 131
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
R V+E+L+ NHP DCP+C++GG C LQD ++ G + R RFT
Sbjct: 88 RASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFT 131
>sp|Q87ZQ4|NUOG_PSESM NADH-quinone oxidoreductase subunit G OS=Pseudomonas syringae pv.
tomato (strain DC3000) GN=nuoG PE=3 SV=1
Length = 905
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 6 VKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
+ + ++ R V+E+L+ NHP DCP+C++GG C LQD ++ G + R RFT
Sbjct: 77 ISIEDDESKAFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFT 131
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
R V+E+L+ NHP DCP+C++GG C LQD ++ G + R RFT
Sbjct: 88 RASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVMTGHNERRYRFT 131
>sp|Q8EI34|NUOG_SHEON NADH-quinone oxidoreductase subunit G OS=Shewanella oneidensis
(strain MR-1) GN=nuoG PE=3 SV=1
Length = 909
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFG--SDRSRFT 58
G + E + R+ V+E+ + NHP DCP+C++GG C LQD ++ G S R RFT
Sbjct: 74 GTYISIEDEEAKEFRKCVVEWQMTNHPHDCPVCEEGGACHLQDMTVMTGHNSRRYRFT 131
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFG--SDRSRFT 132
R+ V+E+ + NHP DCP+C++GG C LQD ++ G S R RFT
Sbjct: 88 RKCVVEWQMTNHPHDCPVCEEGGACHLQDMTVMTGHNSRRYRFT 131
>sp|Q7VRV7|NUOG_BLOFL NADH-quinone oxidoreductase subunit G OS=Blochmannia floridanus
GN=nuoG PE=3 SV=1
Length = 941
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 17 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 58
R+ ++E L+VNHP DCP+C++GG C LQD ++ R RFT
Sbjct: 96 RKNILELLMVNHPHDCPVCEEGGNCHLQDMAVMVEHTYRRYRFT 139
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSD--RSRFT 132
R+ ++E L+VNHP DCP+C++GG C LQD ++ R RFT
Sbjct: 96 RKNILELLMVNHPHDCPVCEEGGNCHLQDMAVMVEHTYRRYRFT 139
>sp|P57257|NUOG_BUCAI NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=nuoG PE=3 SV=1
Length = 906
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 8 TNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSM 48
T SE+ R A ++E LL NHP DCP+C++GG C LQD ++
Sbjct: 82 TESEVFRSA---IVELLLTNHPHDCPVCEEGGHCHLQDMTV 119
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSM 122
R ++E LL NHP DCP+C++GG C LQD ++
Sbjct: 88 RSAIVELLLTNHPHDCPVCEEGGHCHLQDMTV 119
>sp|Q46508|HNDD_DESFR NADP-reducing hydrogenase subunit HndC OS=Desulfovibrio
fructosovorans GN=hndD PE=1 SV=1
Length = 585
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 6 VKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDIDFSGK 65
VKTNS AR V+E LL +HP DC +C + GEC+LQ + FG S + + S
Sbjct: 79 VKTNSLRVLNARRTVLELLLSDHPKDCLVCAKSGECELQTLAERFGIRESPYDGGEMSHY 138
Query: 66 R 66
R
Sbjct: 139 R 139
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 90 AREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
AR V+E LL +HP DC +C + GEC+LQ + FG S +
Sbjct: 89 ARRTVLELLLSDHPKDCLVCAKSGECELQTLAERFGIRESPY 130
>sp|P22318|HOXU_CUPNH NAD-reducing hydrogenase HoxS subunit gamma OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=hoxU PE=1 SV=2
Length = 234
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 2 KGWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRFTDID 61
KG V+ N R+ ++EFL +CP C++ G C LQ SRF
Sbjct: 67 KGLNVEVNDPELVDMRKALVEFLFAEGNHNCPSCEKSGRCQLQAVGYEVDMMVSRFP-YR 125
Query: 62 FSGKRWGYLREKLFL 76
F + + EK++L
Sbjct: 126 FPVRVVDHASEKIWL 140
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 91 REGVMEFLLVNHPLDCPICDQGGECDLQDQSMAFGSDRSRF 131
R+ ++EFL +CP C++ G C LQ SRF
Sbjct: 82 RKALVEFLFAEGNHNCPSCEKSGRCQLQAVGYEVDMMVSRF 122
>sp|A4IFU7|TFEC_BOVIN Transcription factor EC OS=Bos taurus GN=TFEC PE=2 SV=1
Length = 317
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 34 ICDQGGECDLQDQSMAFGSDRSRFTDIDFSG 64
+ QG +L DQ+MAF S FTD+ FS
Sbjct: 236 VLSQGTSPELCDQAMAFSDPLSHFTDLSFSA 266
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 108 ICDQGGECDLQDQSMAFGSDRSRFTDIDFSG 138
+ QG +L DQ+MAF S FTD+ FS
Sbjct: 236 VLSQGTSPELCDQAMAFSDPLSHFTDLSFSA 266
>sp|Q795Y4|FDHL_BACSU Putative formate dehydrogenase YrhE OS=Bacillus subtilis (strain
168) GN=yrhE PE=3 SV=1
Length = 980
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 3 GWRVKTNSEMTRRAREGVMEFLLVNHPLDCPICD-QGGECDLQDQSMAFGSDRSRF 57
G + + + A+ M+ LL NH L C +CD G C L + + G + ++
Sbjct: 72 GMSIDLSGNRVKEAQTEAMDRLLENHLLYCTVCDNNNGNCTLHNTAEMMGIEHQKY 127
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 78 ELSGKRESTCAPAREGVMEFLLVNHPLDCPICD-QGGECDLQDQSMAFGSDRSRF 131
+LSG R A+ M+ LL NH L C +CD G C L + + G + ++
Sbjct: 76 DLSGNR---VKEAQTEAMDRLLENHLLYCTVCDNNNGNCTLHNTAEMMGIEHQKY 127
>sp|Q3V544|RPOC2_ACOCL DNA-directed RNA polymerase subunit beta'' OS=Acorus calamus
GN=rpoC2 PE=3 SV=1
Length = 1386
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 44 QDQSMA--FGSDRSRFTDIDFSGKRWGYLREKLFLSELSGKR 83
QDQ+ A F +R +D+ + R +R KLF S+LSGKR
Sbjct: 498 QDQTNAHSFSVERRYISDLSMTNGR---VRHKLFSSDLSGKR 536
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,205,157
Number of Sequences: 539616
Number of extensions: 1996056
Number of successful extensions: 3241
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3133
Number of HSP's gapped (non-prelim): 115
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)