Query psy3845
Match_columns 167
No_of_seqs 130 out of 935
Neff 6.8
Searched_HMMs 46136
Date Fri Aug 16 18:53:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3845.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3845hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2624|consensus 100.0 1.4E-43 3.1E-48 308.0 10.4 163 2-166 196-399 (403)
2 PLN02872 triacylglycerol lipas 100.0 2.4E-37 5.3E-42 269.2 11.0 158 2-165 194-389 (395)
3 TIGR01836 PHA_synth_III_C poly 98.2 1.8E-06 3.9E-11 73.5 4.9 70 93-164 280-349 (350)
4 PRK07868 acyl-CoA synthetase; 97.7 3.5E-05 7.6E-10 74.4 5.1 71 94-166 292-362 (994)
5 PF00561 Abhydrolase_1: alpha/ 97.6 8.9E-06 1.9E-10 62.8 -0.5 69 81-152 157-225 (230)
6 PHA02857 monoglyceride lipase; 97.5 0.00017 3.8E-09 58.4 5.8 70 94-165 204-273 (276)
7 PLN02385 hydrolase; alpha/beta 97.4 0.0003 6.5E-09 59.7 5.8 72 94-166 274-346 (349)
8 TIGR01738 bioH putative pimelo 97.3 0.00033 7.1E-09 53.9 4.6 62 94-161 183-244 (245)
9 PRK10749 lysophospholipase L2; 97.3 0.00033 7.2E-09 59.1 4.6 73 94-166 254-330 (330)
10 TIGR02240 PHA_depoly_arom poly 97.2 0.00058 1.3E-08 55.6 5.5 65 95-166 203-267 (276)
11 PF00326 Peptidase_S9: Prolyl 97.1 0.00053 1.1E-08 53.9 4.1 83 81-166 125-210 (213)
12 PRK00870 haloalkane dehalogena 97.1 0.00083 1.8E-08 55.5 5.3 67 95-165 235-301 (302)
13 PLN02298 hydrolase, alpha/beta 97.1 0.00076 1.6E-08 56.5 5.1 72 94-166 246-318 (330)
14 TIGR03611 RutD pyrimidine util 97.1 0.00091 2E-08 52.1 5.1 64 94-163 193-256 (257)
15 PLN02652 hydrolase; alpha/beta 97.0 0.0013 2.7E-08 57.7 5.9 69 94-165 319-387 (395)
16 TIGR02427 protocat_pcaD 3-oxoa 97.0 0.0014 3E-08 50.4 5.5 63 94-162 188-250 (251)
17 TIGR03343 biphenyl_bphD 2-hydr 96.9 0.002 4.4E-08 51.9 5.7 64 94-163 218-281 (282)
18 PRK07581 hypothetical protein; 96.9 0.0022 4.8E-08 54.0 5.8 66 94-165 270-336 (339)
19 PLN02824 hydrolase, alpha/beta 96.9 0.0019 4.2E-08 52.9 5.2 66 93-164 228-293 (294)
20 PLN02965 Probable pheophorbida 96.8 0.0028 6E-08 51.1 5.9 67 94-166 188-254 (255)
21 TIGR01392 homoserO_Ac_trn homo 96.8 0.0014 3.1E-08 55.7 4.1 66 95-163 284-351 (351)
22 TIGR03056 bchO_mg_che_rel puta 96.7 0.0034 7.5E-08 50.0 5.6 64 94-163 215-278 (278)
23 PLN03087 BODYGUARD 1 domain co 96.7 0.0028 6.2E-08 57.1 5.3 62 97-163 416-477 (481)
24 TIGR01849 PHB_depoly_PhaZ poly 96.7 0.0019 4.1E-08 57.1 3.9 73 92-165 330-406 (406)
25 PRK06765 homoserine O-acetyltr 96.6 0.0032 6.9E-08 55.2 5.1 68 94-164 318-387 (389)
26 TIGR01250 pro_imino_pep_2 prol 96.6 0.004 8.7E-08 49.1 5.1 63 94-163 226-288 (288)
27 PF01738 DLH: Dienelactone hyd 96.6 0.0022 4.7E-08 50.7 3.5 83 83-165 127-217 (218)
28 PRK00175 metX homoserine O-ace 96.5 0.0041 9E-08 53.7 4.9 68 95-165 305-374 (379)
29 PLN02679 hydrolase, alpha/beta 96.4 0.007 1.5E-07 51.9 6.0 65 95-165 288-357 (360)
30 PRK08775 homoserine O-acetyltr 96.4 0.0055 1.2E-07 51.9 5.0 66 94-165 272-339 (343)
31 PRK10349 carboxylesterase BioH 96.4 0.0057 1.2E-07 49.0 4.8 62 94-161 191-252 (256)
32 PRK10985 putative hydrolase; P 96.3 0.0093 2E-07 50.3 5.6 71 92-165 248-320 (324)
33 PRK06489 hypothetical protein; 96.1 0.011 2.5E-07 50.4 5.6 66 94-166 287-358 (360)
34 PRK03592 haloalkane dehalogena 96.1 0.011 2.4E-07 48.4 5.2 65 95-165 224-289 (295)
35 PLN02578 hydrolase 96.1 0.013 2.8E-07 50.0 5.7 62 95-163 292-353 (354)
36 PRK10673 acyl-CoA esterase; Pr 95.9 0.02 4.4E-07 45.3 5.8 64 95-164 191-254 (255)
37 PF12697 Abhydrolase_6: Alpha/ 95.9 0.0065 1.4E-07 45.7 2.7 50 93-145 170-219 (228)
38 PLN02511 hydrolase 95.8 0.02 4.4E-07 49.8 5.8 70 92-164 291-364 (388)
39 COG1506 DAP2 Dipeptidyl aminop 95.6 0.016 3.5E-07 53.6 4.7 83 81-166 534-617 (620)
40 TIGR01249 pro_imino_pep_1 prol 95.6 0.024 5.1E-07 47.2 5.3 63 94-165 242-305 (306)
41 KOG3043|consensus 95.5 0.024 5.2E-07 46.6 4.8 82 84-166 150-241 (242)
42 TIGR01607 PST-A Plasmodium sub 95.5 0.029 6.3E-07 47.7 5.4 66 95-163 264-331 (332)
43 COG0429 Predicted hydrolase of 95.4 0.019 4.2E-07 49.5 4.1 100 62-165 231-340 (345)
44 KOG1455|consensus 95.4 0.027 5.8E-07 48.1 4.7 70 94-165 241-312 (313)
45 PRK03204 haloalkane dehalogena 95.3 0.036 7.7E-07 45.8 5.4 58 99-162 227-285 (286)
46 PF12695 Abhydrolase_5: Alpha/ 95.3 0.013 2.8E-07 42.3 2.3 51 90-142 95-145 (145)
47 KOG1454|consensus 95.2 0.047 1E-06 46.8 5.8 65 95-165 259-324 (326)
48 COG2267 PldB Lysophospholipase 95.2 0.048 1E-06 46.0 5.8 73 93-166 222-295 (298)
49 PRK10566 esterase; Provisional 95.0 0.043 9.2E-07 43.7 4.9 64 95-165 181-248 (249)
50 PLN02894 hydrolase, alpha/beta 95.0 0.059 1.3E-06 47.2 6.0 68 93-166 319-386 (402)
51 TIGR03695 menH_SHCHC 2-succiny 94.5 0.064 1.4E-06 40.8 4.4 62 94-162 189-250 (251)
52 PRK05077 frsA fermentation/res 94.4 0.097 2.1E-06 46.1 5.9 61 96-165 352-412 (414)
53 COG3243 PhaC Poly(3-hydroxyalk 94.3 0.048 1.1E-06 48.5 3.7 58 93-153 324-383 (445)
54 PRK13604 luxD acyl transferase 94.2 0.047 1E-06 46.7 3.3 49 93-142 196-244 (307)
55 TIGR03100 hydr1_PEP hydrolase, 94.1 0.051 1.1E-06 44.7 3.3 63 95-163 203-273 (274)
56 PF11339 DUF3141: Protein of u 94.1 0.078 1.7E-06 48.4 4.7 84 80-164 275-370 (581)
57 PLN03084 alpha/beta hydrolase 93.5 0.17 3.8E-06 44.2 5.7 61 96-163 322-382 (383)
58 COG1073 Hydrolases of the alph 93.3 0.17 3.7E-06 40.2 5.0 74 91-165 223-297 (299)
59 PRK14875 acetoin dehydrogenase 92.8 0.16 3.5E-06 42.6 4.4 62 94-164 309-370 (371)
60 PRK05855 short chain dehydroge 92.6 0.21 4.6E-06 44.3 5.0 64 95-165 229-292 (582)
61 COG0412 Dienelactone hydrolase 92.2 0.27 6E-06 40.1 4.9 83 83-165 141-233 (236)
62 TIGR01838 PHA_synth_I poly(R)- 92.0 0.17 3.7E-06 46.3 3.7 53 93-148 409-461 (532)
63 KOG4178|consensus 91.6 0.47 1E-05 40.9 5.8 100 58-166 220-321 (322)
64 PRK11126 2-succinyl-6-hydroxy- 91.6 0.49 1.1E-05 37.0 5.5 59 94-164 183-241 (242)
65 COG2021 MET2 Homoserine acetyl 90.1 0.52 1.1E-05 41.3 4.7 55 95-150 302-356 (368)
66 COG1647 Esterase/lipase [Gener 90.1 0.34 7.3E-06 40.0 3.3 67 94-164 176-243 (243)
67 PLN02980 2-oxoglutarate decarb 89.9 0.54 1.2E-05 48.4 5.4 69 94-166 1563-1640(1655)
68 TIGR01839 PHA_synth_II poly(R) 89.2 0.41 8.9E-06 44.2 3.6 51 92-145 434-484 (560)
69 PRK05371 x-prolyl-dipeptidyl a 89.2 0.44 9.5E-06 45.5 3.9 71 92-165 448-519 (767)
70 PF02230 Abhydrolase_2: Phosph 89.0 0.64 1.4E-05 36.7 4.2 59 99-164 155-214 (216)
71 PF08840 BAAT_C: BAAT / Acyl-C 88.7 0.27 5.8E-06 39.4 1.8 75 91-165 107-210 (213)
72 PLN02211 methyl indole-3-aceta 88.7 1.2 2.7E-05 36.5 5.8 60 97-163 208-268 (273)
73 COG0596 MhpC Predicted hydrola 87.5 1.6 3.4E-05 32.5 5.3 55 93-149 215-269 (282)
74 PRK11460 putative hydrolase; P 87.4 1.6 3.4E-05 35.1 5.6 61 97-164 146-207 (232)
75 KOG1838|consensus 87.1 1.2 2.6E-05 39.6 5.0 99 62-164 279-387 (409)
76 KOG2984|consensus 86.3 1.6 3.4E-05 35.9 4.9 66 94-165 211-276 (277)
77 PF10142 PhoPQ_related: PhoPQ- 86.1 1.4 3E-05 38.7 4.9 99 57-164 211-319 (367)
78 PF08386 Abhydrolase_4: TAP-li 84.4 3.4 7.4E-05 29.2 5.5 45 98-145 33-77 (103)
79 PF03583 LIP: Secretory lipase 83.7 1.2 2.6E-05 37.4 3.3 47 99-145 219-267 (290)
80 KOG4667|consensus 82.1 1.8 3.9E-05 35.8 3.6 42 98-142 198-239 (269)
81 PF12740 Chlorophyllase2: Chlo 80.7 4.8 0.0001 33.7 5.8 68 79-148 130-211 (259)
82 KOG1552|consensus 80.2 2.1 4.6E-05 35.8 3.5 49 95-145 188-236 (258)
83 PRK11071 esterase YqiA; Provis 80.1 3.7 8E-05 32.0 4.7 55 98-163 135-189 (190)
84 PF06850 PHB_depo_C: PHB de-po 79.8 2.4 5.2E-05 34.2 3.6 98 61-165 101-202 (202)
85 PF06342 DUF1057: Alpha/beta h 79.4 2.5 5.5E-05 36.0 3.7 57 94-163 207-263 (297)
86 PF02273 Acyl_transf_2: Acyl t 76.5 2.7 5.7E-05 35.5 3.0 49 92-141 188-236 (294)
87 PF05705 DUF829: Eukaryotic pr 76.2 2.6 5.7E-05 33.7 2.9 47 98-144 177-224 (240)
88 PF05448 AXE1: Acetyl xylan es 75.9 2.6 5.6E-05 36.0 2.9 61 96-164 259-319 (320)
89 COG4188 Predicted dienelactone 75.0 2 4.3E-05 37.7 2.0 50 95-145 247-297 (365)
90 KOG4409|consensus 72.6 8.4 0.00018 33.8 5.2 66 95-165 297-364 (365)
91 PRK10162 acetyl esterase; Prov 72.2 9.5 0.00021 32.1 5.4 64 100-165 249-315 (318)
92 TIGR01840 esterase_phb esteras 70.9 3.9 8.6E-05 32.0 2.7 32 97-128 166-197 (212)
93 PLN02442 S-formylglutathione h 69.1 5.6 0.00012 32.9 3.4 52 93-144 211-264 (283)
94 COG3208 GrsT Predicted thioest 64.2 7.8 0.00017 32.2 3.2 62 96-163 173-234 (244)
95 KOG4391|consensus 63.7 7 0.00015 32.6 2.8 51 96-147 218-268 (300)
96 PLN00021 chlorophyllase 63.3 15 0.00033 31.2 4.9 47 97-145 187-243 (313)
97 PF03959 FSH1: Serine hydrolas 63.1 6.2 0.00013 31.3 2.4 35 93-127 155-189 (212)
98 PRK10115 protease 2; Provision 60.3 14 0.00031 34.8 4.6 53 90-142 596-653 (686)
99 PF06821 Ser_hydrolase: Serine 59.9 4.9 0.00011 31.1 1.3 46 96-145 111-156 (171)
100 COG0400 Predicted esterase [Ge 57.2 6.9 0.00015 31.5 1.7 58 99-164 146-204 (207)
101 PF08257 Sulfakinin: Sulfakini 56.3 5.4 0.00012 16.3 0.5 8 137-144 2-9 (9)
102 COG4553 DepA Poly-beta-hydroxy 53.0 19 0.0004 31.4 3.7 100 60-166 305-408 (415)
103 TIGR02821 fghA_ester_D S-formy 51.4 21 0.00046 29.1 3.8 54 98-151 210-265 (275)
104 PF10503 Esterase_phd: Esteras 50.7 9.7 0.00021 30.9 1.6 29 100-128 170-198 (220)
105 PF07224 Chlorophyllase: Chlor 48.3 37 0.00081 29.0 4.7 61 82-145 159-233 (307)
106 PF07859 Abhydrolase_3: alpha/ 47.6 12 0.00026 28.7 1.6 40 100-141 167-207 (211)
107 COG3458 Acetyl esterase (deace 45.4 28 0.0006 29.9 3.5 46 97-144 257-302 (321)
108 PF02129 Peptidase_S15: X-Pro 44.5 16 0.00036 29.7 2.1 47 95-142 224-271 (272)
109 PF08538 DUF1749: Protein of u 43.4 14 0.00031 31.6 1.6 48 95-142 228-281 (303)
110 PF10230 DUF2305: Uncharacteri 43.3 38 0.00083 27.9 4.1 43 99-141 221-263 (266)
111 PLN02213 sinapoylglucose-malat 41.9 33 0.00072 29.0 3.6 28 99-126 233-260 (319)
112 COG3545 Predicted esterase of 41.4 72 0.0016 25.4 5.1 109 44-163 63-177 (181)
113 KOG2551|consensus 41.2 37 0.0008 28.0 3.6 64 93-165 157-220 (230)
114 PF08406 CbbQ_C: CbbQ/NirQ/Nor 36.9 21 0.00045 24.8 1.3 21 47-69 33-53 (86)
115 PF06500 DUF1100: Alpha/beta h 34.4 30 0.00064 31.0 2.2 31 96-126 349-379 (411)
116 PF09752 DUF2048: Uncharacteri 33.5 77 0.0017 27.8 4.5 57 100-163 290-347 (348)
117 COG4099 Predicted peptidase [G 32.7 18 0.00039 31.5 0.6 67 93-163 308-383 (387)
118 COG0657 Aes Esterase/lipase [L 31.5 1E+02 0.0022 25.4 4.8 65 95-163 242-308 (312)
119 KOG2100|consensus 29.5 93 0.002 29.9 4.8 72 90-163 672-745 (755)
120 PF07519 Tannase: Tannase and 27.9 1.8E+02 0.0039 26.3 6.1 70 94-164 345-426 (474)
121 PLN02209 serine carboxypeptida 25.4 63 0.0014 28.9 2.7 28 99-126 351-378 (437)
122 COG3571 Predicted hydrolase of 25.0 42 0.00091 26.8 1.3 27 94-120 137-163 (213)
123 KOG3253|consensus 24.8 86 0.0019 29.9 3.5 48 92-141 297-344 (784)
124 PRK00819 RNA 2'-phosphotransfe 24.6 84 0.0018 24.7 3.0 56 58-113 51-106 (179)
125 cd01840 SGNH_hydrolase_yrhL_li 24.1 2.5E+02 0.0055 20.4 5.5 26 101-127 53-78 (150)
126 KOG2565|consensus 24.0 1.1E+02 0.0024 27.5 3.9 114 44-166 324-464 (469)
127 COG3160 Rsd Regulator of sigma 23.6 35 0.00077 26.2 0.7 73 38-118 32-121 (162)
128 PTZ00472 serine carboxypeptida 23.2 72 0.0016 28.6 2.7 28 99-126 364-391 (462)
129 COG2945 Predicted hydrolase of 21.5 83 0.0018 25.6 2.4 82 57-142 89-188 (210)
130 PLN03016 sinapoylglucose-malat 21.5 86 0.0019 28.0 2.8 28 99-126 347-374 (433)
No 1
>KOG2624|consensus
Probab=100.00 E-value=1.4e-43 Score=308.04 Aligned_cols=163 Identities=37% Similarity=0.653 Sum_probs=142.1
Q ss_pred CceEEeccCCcHHHHHHHhhcchHHHHHHHhchh-----------hH-----------hhcch-----------------
Q psy3845 2 RPIAFINHVKSPVIRFLATISDPLASIRQSTSIN-----------GG-----------RQCME----------------- 42 (167)
Q Consensus 2 APv~~l~~~~s~~~~~l~~~~~~~~~~~~~~g~~-----------~~-----------~~C~~----------------- 42 (167)
||+++++|+++++.+.+..+......+..++|.. +. .+|.+
T Consensus 196 AP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~ 275 (403)
T KOG2624|consen 196 APAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTL 275 (403)
T ss_pred cchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcc
Confidence 8999999999998877766544433333444442 11 34431
Q ss_pred --hhhccCCCCccccchhHHHHHhhcCCCceeecccCCccCccccCCcCCccccccCCCceeEEeeeCCCcccCccCHHH
Q psy3845 43 --TVLKTKPPTKEEEPNLFILYYLLVPDRTFQQYDLGWLGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDV 120 (167)
Q Consensus 43 --~~~~~~p~gtS~~~k~~~H~~Q~~~sg~F~~yDyG~~~N~~~Yg~~~PP~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~ 120 (167)
++++|.|+|||+ ||+.||+|+++||+|++||||+.+|+++|||.+||+|++++|++||+||||++|+|++++||++
T Consensus 276 ~~~~~~h~pagtSv--k~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~ 353 (403)
T KOG2624|consen 276 LPVYLAHLPAGTSV--KNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLI 353 (403)
T ss_pred cchhhccCCCCccH--HHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHH
Confidence 189999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhhc
Q psy3845 121 LSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 121 L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~~ 166 (167)
+...++|....+.+++++|||+||+||.||+++||++||++|++++
T Consensus 354 ~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 354 LLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred HHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 9999998777677779999999999999999999999999999765
No 2
>PLN02872 triacylglycerol lipase
Probab=100.00 E-value=2.4e-37 Score=269.17 Aligned_cols=158 Identities=24% Similarity=0.472 Sum_probs=134.9
Q ss_pred CceEEeccCCcHHHHHHHhhcchHHHHHHHhchh-----------hH-hhcc------h------------------hhh
Q psy3845 2 RPIAFINHVKSPVIRFLATISDPLASIRQSTSIN-----------GG-RQCM------E------------------TVL 45 (167)
Q Consensus 2 APv~~l~~~~s~~~~~l~~~~~~~~~~~~~~g~~-----------~~-~~C~------~------------------~~~ 45 (167)
||+++++|+++|++..+.... +..++..+|.. +. .+|. + .++
T Consensus 194 ~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~ 271 (395)
T PLN02872 194 CPISYLDHVTAPLVLRMVFMH--LDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYL 271 (395)
T ss_pred cchhhhccCCCHHHHHHHHHh--HHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHH
Confidence 799999999999876444311 22344445554 22 4553 1 188
Q ss_pred ccCCCCccccchhHHHHHhhcCCCceeecccCCccCccccCCcCCccccccCC--CceeEEeeeCCCcccCccCHHHHHh
Q psy3845 46 KTKPPTKEEEPNLFILYYLLVPDRTFQQYDLGWLGNWRKYGQLRPPSYRLSNV--KVPVALFYSNNDWLAPGEDVDVLSR 123 (167)
Q Consensus 46 ~~~p~gtS~~~k~~~H~~Q~~~sg~F~~yDyG~~~N~~~Yg~~~PP~Y~l~~i--~~Pv~l~~g~~D~L~~~~Dv~~L~~ 123 (167)
+|.|+|||+ ||+.||+|++++|+||+||||..+|+++|||.+||+|+|++| ++||+++||++|++++++|++++.+
T Consensus 272 ~~~pagtS~--k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~ 349 (395)
T PLN02872 272 EYEPHPSSV--KNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLA 349 (395)
T ss_pred hcCCCcchH--HHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHH
Confidence 999999999 999999999999999999999999999999999999999999 5899999999999999999999999
Q ss_pred hCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 124 KLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 124 ~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
+||+.. ..+.+++++|+||+|+.+++++||+.|+++|+++
T Consensus 350 ~Lp~~~--~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 350 ELPSKP--ELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred HCCCcc--EEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 999854 3456789999999999999999999999999875
No 3
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.20 E-value=1.8e-06 Score=73.50 Aligned_cols=70 Identities=17% Similarity=0.255 Sum_probs=60.1
Q ss_pred ccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhh
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
.++++|++|+.+++|++|.+++++.++.+.+.+++.. +..+.+ +.+|.+++.+.++.+.++++|+++|++
T Consensus 280 ~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~-~~~~~~-~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 280 VDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSED-YTELSF-PGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred ccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCC-eEEEEc-CCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 5688999999999999999999999999999998632 222333 479999999999999999999999875
No 4
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.74 E-value=3.5e-05 Score=74.38 Aligned_cols=71 Identities=18% Similarity=0.237 Sum_probs=63.5
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhhc
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~~ 166 (167)
+|++|++|+.+++|+.|.+++++.++.+.+.+|+.. ....++..+|+..+.|..+.+.+++.|.++|++.+
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~--~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAE--VYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCe--EEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 589999999999999999999999999999999854 22335799999999999999999999999998764
No 5
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.65 E-value=8.9e-06 Score=62.82 Aligned_cols=69 Identities=30% Similarity=0.413 Sum_probs=58.6
Q ss_pred CccccCCcCCccccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchh
Q psy3845 81 NWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKK 152 (167)
Q Consensus 81 N~~~Yg~~~PP~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~ 152 (167)
|...|....++...+++|++|+.+++|+.|.+++++++..+.+.+|+.. .+.+++.+|..|+++.+...
T Consensus 157 ~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~---~~~~~~~GH~~~~~~~~~~~ 225 (230)
T PF00561_consen 157 NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQ---LVLIEGSGHFAFLEGPDEFN 225 (230)
T ss_dssp HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEE---EEEETTCCSTHHHHSHHHHH
T ss_pred ccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCE---EEECCCCChHHHhcCHHhhh
Confidence 5566777777888999999999999999999999999999999999943 34567889999999877643
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=97.54 E-value=0.00017 Score=58.42 Aligned_cols=70 Identities=10% Similarity=0.051 Sum_probs=55.8
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
.+.+|++||.+++|++|.+++++..+.+.++++.-+ ..+.+++-+|.=..=-.+.++.++++|+++|++.
T Consensus 204 ~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~--~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 204 IIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNR--EIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred hcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCc--eEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 477899999999999999999999999988874322 2344678899765434455889999999999874
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=97.41 E-value=0.0003 Score=59.71 Aligned_cols=72 Identities=17% Similarity=0.123 Sum_probs=54.0
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccc-hhHHHHHHHHHHhhhc
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDV-KKLLYDDVVRVLHKYN 166 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a-~~~vy~~ii~~l~~~~ 166 (167)
.+.+|++|+.+++|++|.+++++..+.+.+++++- ....+.+++-+|.=+.=-.+. .+.|++.|+++|+++.
T Consensus 274 ~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~-~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 274 QLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSS-DKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred hcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCC-CceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 47789999999999999999999999999988541 112344688999643323333 4569999999998753
No 8
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.33 E-value=0.00033 Score=53.89 Aligned_cols=62 Identities=23% Similarity=0.304 Sum_probs=48.5
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHH
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRV 161 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~ 161 (167)
.+.+|++||.+++|++|.+++++..+.+.+.+|+.. .+.+++-+|.-++ +..+.+.+.|.++
T Consensus 183 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~---e~p~~~~~~i~~f 244 (245)
T TIGR01738 183 PLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSE---LYIFAKAAHAPFL---SHAEAFCALLVAF 244 (245)
T ss_pred HHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCe---EEEeCCCCCCccc---cCHHHHHHHHHhh
Confidence 467899999999999999999998888999999854 2346789999666 4455566665554
No 9
>PRK10749 lysophospholipase L2; Provisional
Probab=97.29 E-value=0.00033 Score=59.13 Aligned_cols=73 Identities=11% Similarity=0.170 Sum_probs=55.8
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCc----eeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhhc
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNV----VGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~----~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~~ 166 (167)
.+.++++|+.+++|++|.+++++..+.+.+.+++. ..+..+.+++.+|.=+.=....++.|+++|++.|++.+
T Consensus 254 ~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~~ 330 (330)
T PRK10749 254 GAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRHN 330 (330)
T ss_pred hccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhcC
Confidence 35779999999999999999999888888887542 12234567899997553333347889999999998764
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.25 E-value=0.00058 Score=55.60 Aligned_cols=65 Identities=15% Similarity=0.289 Sum_probs=53.3
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhhc
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~~ 166 (167)
+.+|++|+.+++|++|.+++++..+.+.+.+|+.. ...+ +. +|+-++ +..+.+.+.|.+++++.+
T Consensus 203 l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~-~~~i--~~-gH~~~~---e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 203 LHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAE-LHII--DD-GHLFLI---TRAEAVAPIIMKFLAEER 267 (276)
T ss_pred hhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCE-EEEE--cC-CCchhh---ccHHHHHHHHHHHHHHhh
Confidence 68899999999999999999999999999999843 3333 45 997553 567788899999988765
No 11
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.14 E-value=0.00053 Score=53.91 Aligned_cols=83 Identities=20% Similarity=0.213 Sum_probs=58.0
Q ss_pred CccccCCcCCccccccC--CCceeEEeeeCCCcccCccCHHHHHhhCCCc-eeeEEeeCCCCCccchhhcccchhHHHHH
Q psy3845 81 NWRKYGQLRPPSYRLSN--VKVPVALFYSNNDWLAPGEDVDVLSRKLPNV-VGKYKVPLKRFNHLDFMWAIDVKKLLYDD 157 (167)
Q Consensus 81 N~~~Yg~~~PP~Y~l~~--i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~-~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ 157 (167)
+...|.. .-|..++.+ +++||.+++|++|..++++....+.+.|... +....+.+|+-+| .|.-. ......+.+
T Consensus 125 ~~~~~~~-~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH-~~~~~-~~~~~~~~~ 201 (213)
T PF00326_consen 125 NPEFYRE-LSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH-GFGNP-ENRRDWYER 201 (213)
T ss_dssp SHHHHHH-HHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS-STTSH-HHHHHHHHH
T ss_pred hhhhhhh-hccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC-CCCCc-hhHHHHHHH
Confidence 4444432 224566777 8999999999999999999999988877531 2245566789999 22222 333468899
Q ss_pred HHHHHhhhc
Q psy3845 158 VVRVLHKYN 166 (167)
Q Consensus 158 ii~~l~~~~ 166 (167)
++++++++-
T Consensus 202 ~~~f~~~~l 210 (213)
T PF00326_consen 202 ILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 999998864
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=97.13 E-value=0.00083 Score=55.47 Aligned_cols=67 Identities=21% Similarity=0.335 Sum_probs=52.6
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
+.+|++|+.+++|++|.+++++. +.+.+.+|+......+.+++-+|.=+ .+..+.+.+.|.++|++.
T Consensus 235 l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~---~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 235 LERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQ---EDSGEELAEAVLEFIRAT 301 (302)
T ss_pred hhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccch---hhChHHHHHHHHHHHhcC
Confidence 57899999999999999999866 88998999753222345678999843 366678899999988754
No 13
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=97.13 E-value=0.00076 Score=56.51 Aligned_cols=72 Identities=14% Similarity=0.147 Sum_probs=54.7
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhccc-chhHHHHHHHHHHhhhc
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAID-VKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~-a~~~vy~~ii~~l~~~~ 166 (167)
.+.+|++|+.+++|++|.+++++..+++.++++.- ....+.+++-+|.=+.--.+ ..+.+++.|+++|+++.
T Consensus 246 ~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~-~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 246 KLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSE-DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred hhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccC-CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 36789999999999999999999999998888631 11334567888976554443 35678899999988763
No 14
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=97.11 E-value=0.00091 Score=52.12 Aligned_cols=64 Identities=23% Similarity=0.264 Sum_probs=50.8
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
.+.++++|+.+++|++|.+++++..+.+.+.+|+.. .+.+++-+|.-++ +..+.+.+.|.++|+
T Consensus 193 ~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~---~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 193 RLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQ---LKLLPYGGHASNV---TDPETFNRALLDFLK 256 (257)
T ss_pred HhcccCccEEEEecCcCcccCHHHHHHHHHhcCCce---EEEECCCCCCccc---cCHHHHHHHHHHHhc
Confidence 477899999999999999999999999999999853 2345788998443 455667778877775
No 15
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.05 E-value=0.0013 Score=57.72 Aligned_cols=69 Identities=14% Similarity=0.106 Sum_probs=55.0
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
.+.+|++|+.+++|++|.+++++..+.+.+++++.. +..+.+++..|.-+. .+.+++++++|+++|+..
T Consensus 319 ~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~-k~l~~~~ga~H~l~~--e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 319 NFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRH-KDIKLYDGFLHDLLF--EPEREEVGRDIIDWMEKR 387 (395)
T ss_pred hcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCC-ceEEEECCCeEEecc--CCCHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999877521 122346788898655 456889999999999864
No 16
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.04 E-value=0.0014 Score=50.41 Aligned_cols=63 Identities=17% Similarity=0.262 Sum_probs=48.5
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHH
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVL 162 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l 162 (167)
.++++++||.+++|++|.+++++.++.+.+.+++.. .+.+++-+|.-++ +..+.+.+.|.+++
T Consensus 188 ~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~---~~p~~~~~~i~~fl 250 (251)
T TIGR02427 188 RLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGAR---FAEIRGAGHIPCV---EQPEAFNAALRDFL 250 (251)
T ss_pred HhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCce---EEEECCCCCcccc---cChHHHHHHHHHHh
Confidence 467899999999999999999999999999999853 3345789997765 44555555555544
No 17
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=96.92 E-value=0.002 Score=51.92 Aligned_cols=64 Identities=17% Similarity=0.235 Sum_probs=50.5
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
.+++|++|+.+++|++|.+++++..+.+.+.+|+.. .+.+++-+|+-.. +-.+.+.+.|.++|+
T Consensus 218 ~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~---~~~i~~agH~~~~---e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 218 RLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQ---LHVFSRCGHWAQW---EHADAFNRLVIDFLR 281 (282)
T ss_pred HHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCE---EEEeCCCCcCCcc---cCHHHHHHHHHHHhh
Confidence 478899999999999999999998999999999854 2346789998543 444556677777664
No 18
>PRK07581 hypothetical protein; Validated
Probab=96.87 E-value=0.0022 Score=53.96 Aligned_cols=66 Identities=17% Similarity=0.218 Sum_probs=50.8
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCC-CCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKR-FNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~-~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
.+.+|++|+.+++|++|.+++++..+.+.+.+|+.. .+.+++ .+|+-++ ...+.+...|-+.|+++
T Consensus 270 ~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~---l~~i~~~~GH~~~~---~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 270 ALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAE---LRPIESIWGHLAGF---GQNPADIAFIDAALKEL 336 (339)
T ss_pred HHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCe---EEEeCCCCCccccc---cCcHHHHHHHHHHHHHH
Confidence 477899999999999999999999999999999853 234577 8999887 33334556666666654
No 19
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=96.86 E-value=0.0019 Score=52.93 Aligned_cols=66 Identities=17% Similarity=0.084 Sum_probs=51.4
Q ss_pred ccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhh
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
-.+.+|++|+.+++|++|.+++.+..+.+.+.+++.. .+.+++-+|+-+. ...+.+.+.|.+++++
T Consensus 228 ~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~---~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 228 ELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVED---FIVLPGVGHCPQD---EAPELVNPLIESFVAR 293 (294)
T ss_pred HHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccc---eEEeCCCCCChhh---hCHHHHHHHHHHHHhc
Confidence 3478899999999999999999988888766666532 3456789997553 6677788888888865
No 20
>PLN02965 Probable pheophorbidase
Probab=96.84 E-value=0.0028 Score=51.09 Aligned_cols=67 Identities=19% Similarity=0.262 Sum_probs=54.3
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhhc
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~~ 166 (167)
.+..+++|+.+++|++|.+++++..+.+.+++|+.. .+.+++-+|.=++ ...+.|.+.|.+++++.+
T Consensus 188 ~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~---~~~i~~~GH~~~~---e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 188 NPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQ---TYVLEDSDHSAFF---SVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred hhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcce---EEEecCCCCchhh---cCHHHHHHHHHHHHHHhc
Confidence 345799999999999999999988899999999853 2345788998777 566668888888887654
No 21
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=96.80 E-value=0.0014 Score=55.69 Aligned_cols=66 Identities=21% Similarity=0.308 Sum_probs=51.3
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceee-EE-eeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGK-YK-VPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~-~~-~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
+.+|++|+.+++|++|.+++++.++.+.+.+|+.... .. ...++.+|+-++ +..+.+.+.|.++|+
T Consensus 284 l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l---e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 284 LSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL---VETDQVEELIRGFLR 351 (351)
T ss_pred HhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh---cCHHHHHHHHHHHhC
Confidence 5689999999999999999999999999999985321 11 234689998887 556667777777653
No 22
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=96.72 E-value=0.0034 Score=49.96 Aligned_cols=64 Identities=13% Similarity=0.204 Sum_probs=49.4
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
.+.+|++|+.+++|++|.+++++.++.+.+.+|+.. .+.+++-+|+=+ .+..+.+.+.|.++++
T Consensus 215 ~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~---~~~~~~~gH~~~---~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 215 DLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTAT---LHVVPGGGHLVH---EEQADGVVGLILQAAE 278 (278)
T ss_pred hcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCe---EEEECCCCCccc---ccCHHHHHHHHHHHhC
Confidence 467799999999999999999999999999999853 234578899633 2446667777776653
No 23
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=96.69 E-value=0.0028 Score=57.10 Aligned_cols=62 Identities=19% Similarity=0.267 Sum_probs=50.6
Q ss_pred CCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 97 NVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 97 ~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
+|++|+.+++|++|.+++++..+.+.+.+|+.. .+.+++-+|+.++.+. .+.+.+.|.++.+
T Consensus 416 ~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~---l~vI~~aGH~~~v~e~--p~~fa~~L~~F~~ 477 (481)
T PLN03087 416 QLKCDVAIFHGGDDELIPVECSYAVKAKVPRAR---VKVIDDKDHITIVVGR--QKEFARELEEIWR 477 (481)
T ss_pred hCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCE---EEEeCCCCCcchhhcC--HHHHHHHHHHHhh
Confidence 799999999999999999999999999999954 3456899999998744 3556666666654
No 24
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.66 E-value=0.0019 Score=57.10 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=61.6
Q ss_pred cccccCCC-ceeEEeeeCCCcccCccCHHHHHhh---CCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 92 SYRLSNVK-VPVALFYSNNDWLAPGEDVDVLSRK---LPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 92 ~Y~l~~i~-~Pv~l~~g~~D~L~~~~Dv~~L~~~---L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
.-|+++|+ +|+..+.|++|.++++..+.-+.+. +|... +.....+.-+|+...-|..+++.+++.|.++|.++
T Consensus 330 ~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~-k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 330 RVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDM-KRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred EecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhh-ceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 36899999 9999999999999999999887775 55432 33444568899999999999999999999999763
No 25
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=96.62 E-value=0.0032 Score=55.16 Aligned_cols=68 Identities=16% Similarity=0.121 Sum_probs=51.9
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCc-eeeEEeeCCC-CCccchhhcccchhHHHHHHHHHHhh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNV-VGKYKVPLKR-FNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~-~~~~~~~~~~-~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
.|++|++|+.+++|++|.+++++..+.+.+.+|+. .....+.++. .+|+-|+ ...+.+.+.|.++|++
T Consensus 318 ~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l---e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 318 ALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV---FDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh---cCHHHHHHHHHHHHcc
Confidence 47789999999999999999999999999999742 1122334564 9999998 4555677777777764
No 26
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=96.60 E-value=0.004 Score=49.06 Aligned_cols=63 Identities=16% Similarity=0.252 Sum_probs=48.1
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
.+.+|++|+.+++|++|.+ ++++.+.+.+++++.. .+.+++-+|.-++ +-.+.+.+.|.++|+
T Consensus 226 ~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~---e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 226 KLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSR---LVVFPDGSHMTMI---EDPEVYFKLLSDFIR 288 (288)
T ss_pred HhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCe---EEEeCCCCCCccc---CCHHHHHHHHHHHhC
Confidence 3567999999999999985 5678888888898853 3456789997664 346677777777663
No 27
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=96.58 E-value=0.0022 Score=50.72 Aligned_cols=83 Identities=19% Similarity=0.238 Sum_probs=49.6
Q ss_pred cccC--CcCCccccccCCCceeEEeeeCCCcccCccCHHHHHhhCC-CceeeEEeeCCCCCccch-----hhcccchhHH
Q psy3845 83 RKYG--QLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLP-NVVGKYKVPLKRFNHLDF-----MWAIDVKKLL 154 (167)
Q Consensus 83 ~~Yg--~~~PP~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~-n~~~~~~~~~~~~~HlDF-----i~~~~a~~~v 154 (167)
..|| ...+|.....++++|+.+.+|++|.++++++++.+.+.|. +-.......+++-.|-=. -+-..+.++-
T Consensus 127 ~~yg~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a 206 (218)
T PF01738_consen 127 SFYGGSPPPPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDA 206 (218)
T ss_dssp EES-SSSGGGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHH
T ss_pred EEcCCCCCCcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHH
Confidence 3566 3444555789999999999999999999999999888872 212223334455555322 2333467788
Q ss_pred HHHHHHHHhhh
Q psy3845 155 YDDVVRVLHKY 165 (167)
Q Consensus 155 y~~ii~~l~~~ 165 (167)
+++++++++++
T Consensus 207 ~~~~~~ff~~~ 217 (218)
T PF01738_consen 207 WQRTLAFFKRH 217 (218)
T ss_dssp HHHHHHHHCC-
T ss_pred HHHHHHHHHhc
Confidence 88999998875
No 28
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.49 E-value=0.0041 Score=53.70 Aligned_cols=68 Identities=16% Similarity=0.159 Sum_probs=53.4
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhhCCCce-eeEEeeC-CCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVV-GKYKVPL-KRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~-~~~~~~~-~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
+.+|++|+.+++|++|.+++++..+.+.+.+|+.. ....+.+ ++.+|+-++ ...+.+.+.|.++|++-
T Consensus 305 l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l---e~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 305 LARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL---LDDPRYGRLVRAFLERA 374 (379)
T ss_pred HhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh---cCHHHHHHHHHHHHHhh
Confidence 57899999999999999999999999999998852 1122334 489999887 55556778888888764
No 29
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=96.45 E-value=0.007 Score=51.86 Aligned_cols=65 Identities=20% Similarity=0.388 Sum_probs=50.5
Q ss_pred ccCCCceeEEeeeCCCcccCccC-----HHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGED-----VDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~D-----v~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
+.+|++|+.+++|++|.+++++. .+.+.+.+|+.. .+.+++-+|+=+ .+..+.+.+.|.++|++.
T Consensus 288 l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~---l~~i~~aGH~~~---~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 288 IPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVT---LYVLEGVGHCPH---DDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred hhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceE---EEEcCCCCCCcc---ccCHHHHHHHHHHHHHhc
Confidence 67899999999999999998863 245667788843 344688999633 466888999999998764
No 30
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.39 E-value=0.0055 Score=51.92 Aligned_cols=66 Identities=20% Similarity=0.267 Sum_probs=52.9
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhC-CCceeeEEeeCC-CCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKL-PNVVGKYKVPLK-RFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L-~n~~~~~~~~~~-~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
++.+|++|+.+++|++|.++++++++.+.+.+ |+.. .+.++ +-+|+=++ +..+.+.+.|.++|++-
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~---l~~i~~~aGH~~~l---E~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGS---LRVLRSPYGHDAFL---KETDRIDAILTTALRST 339 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCe---EEEEeCCccHHHHh---cCHHHHHHHHHHHHHhc
Confidence 47889999999999999999999999999988 5643 23455 48998777 56777888888888753
No 31
>PRK10349 carboxylesterase BioH; Provisional
Probab=96.39 E-value=0.0057 Score=48.96 Aligned_cols=62 Identities=23% Similarity=0.309 Sum_probs=47.3
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHH
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRV 161 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~ 161 (167)
.+.+|++|+.+++|++|.+++.+..+.+.+.+||.. .+.+++-+|+=++ +.++.+.+.|.++
T Consensus 191 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~---~~~i~~~gH~~~~---e~p~~f~~~l~~~ 252 (256)
T PRK10349 191 PLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSE---SYIFAKAAHAPFI---SHPAEFCHLLVAL 252 (256)
T ss_pred HHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCe---EEEeCCCCCCccc---cCHHHHHHHHHHH
Confidence 467899999999999999998888888888899864 3446899996444 5566566555544
No 32
>PRK10985 putative hydrolase; Provisional
Probab=96.26 E-value=0.0093 Score=50.26 Aligned_cols=71 Identities=17% Similarity=0.140 Sum_probs=51.8
Q ss_pred cccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhccc--chhHHHHHHHHHHhhh
Q psy3845 92 SYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAID--VKKLLYDDVVRVLHKY 165 (167)
Q Consensus 92 ~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~--a~~~vy~~ii~~l~~~ 165 (167)
.-.+++|++|+.+.+|++|.+++++.++.+.+..|++. .+..++-+|+.|+=|.- -..-.-+.++++++.+
T Consensus 248 ~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 248 LPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVE---YQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred HHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeE---EEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 34578999999999999999999988888776677743 34567899999996641 1122335666666554
No 33
>PRK06489 hypothetical protein; Provisional
Probab=96.13 E-value=0.011 Score=50.40 Aligned_cols=66 Identities=18% Similarity=0.153 Sum_probs=51.0
Q ss_pred cccCCCceeEEeeeCCCcccCccCH--HHHHhhCCCceeeEEeeCCC----CCccchhhcccchhHHHHHHHHHHhhhc
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDV--DVLSRKLPNVVGKYKVPLKR----FNHLDFMWAIDVKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv--~~L~~~L~n~~~~~~~~~~~----~~HlDFi~~~~a~~~vy~~ii~~l~~~~ 166 (167)
.|.+|++||.+++|++|.+++++.. +++.+.+|+.. .+.+++ .+|.-+ ...+.+.+.|.++|++..
T Consensus 287 ~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~---l~~i~~a~~~~GH~~~----e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 287 DLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGR---LVLIPASPETRGHGTT----GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred HHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCe---EEEECCCCCCCCcccc----cCHHHHHHHHHHHHHhcc
Confidence 4778999999999999999999875 78999999853 233456 599642 367777788888887653
No 34
>PRK03592 haloalkane dehalogenase; Provisional
Probab=96.09 E-value=0.011 Score=48.39 Aligned_cols=65 Identities=12% Similarity=0.073 Sum_probs=49.9
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhh-CCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRK-LPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~-L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
+.+|++|+.+++|++|.++++........+ +++.. ...+++-+|+=++ +..+.+.+.|++++++.
T Consensus 224 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~---~~~i~~~gH~~~~---e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 224 LATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLE---ITVFGAGLHFAQE---DSPEEIGAAIAAWLRRL 289 (295)
T ss_pred hccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcc---eeeccCcchhhhh---cCHHHHHHHHHHHHHHh
Confidence 677999999999999999977777665544 66643 2335788998774 56788999999998764
No 35
>PLN02578 hydrolase
Probab=96.07 E-value=0.013 Score=49.98 Aligned_cols=62 Identities=16% Similarity=0.235 Sum_probs=49.0
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
+.+|++|+.+++|++|.+++.++.+.+.+.+|+.. .. .+ +-+|.=+ .+..+.+.+.|.++++
T Consensus 292 l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~-l~--~i-~~GH~~~---~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 292 LSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTT-LV--NL-QAGHCPH---DEVPEQVNKALLEWLS 353 (354)
T ss_pred hhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCE-EE--Ee-CCCCCcc---ccCHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999853 22 23 4688743 4677778888888775
No 36
>PRK10673 acyl-CoA esterase; Provisional
Probab=95.93 E-value=0.02 Score=45.28 Aligned_cols=64 Identities=13% Similarity=0.113 Sum_probs=49.7
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
+.++++|+.+++|++|.+++++..+.+.+.+|+.. ...+++-+|.=. .+..+.+.+.|.++|++
T Consensus 191 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~---~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 191 IPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQAR---AHVIAGAGHWVH---AEKPDAVLRAIRRYLND 254 (255)
T ss_pred cCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcE---EEEeCCCCCeee---ccCHHHHHHHHHHHHhc
Confidence 56788999999999999999999999999999864 234578999532 34466677777777754
No 37
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=95.88 E-value=0.0065 Score=45.67 Aligned_cols=50 Identities=32% Similarity=0.486 Sum_probs=42.2
Q ss_pred ccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchh
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFM 145 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi 145 (167)
-.+.++++||.+++|+.|.+++.+.++.+.+.+|+.. .+.+++.+|+-++
T Consensus 170 ~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 170 EALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAE---LVVIPGAGHFLFL 219 (228)
T ss_dssp HHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEE---EEEETTSSSTHHH
T ss_pred ccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCE---EEEECCCCCccHH
Confidence 4678899999999999999999999999999999853 3456789998554
No 38
>PLN02511 hydrolase
Probab=95.81 E-value=0.02 Score=49.77 Aligned_cols=70 Identities=20% Similarity=0.236 Sum_probs=51.3
Q ss_pred cccccCCCceeEEeeeCCCcccCccCH-HHHHhhCCCceeeEEeeCCCCCccchhhcccch---hHHHHHHHHHHhh
Q psy3845 92 SYRLSNVKVPVALFYSNNDWLAPGEDV-DVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVK---KLLYDDVVRVLHK 164 (167)
Q Consensus 92 ~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv-~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~---~~vy~~ii~~l~~ 164 (167)
...|.+|++|+.+.+|++|.+++++.+ ..+.+.+|+.. .+..++-+|+.|+-+.+.. .-+.+.|.++++.
T Consensus 291 ~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~---l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 291 SDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCL---LIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred hhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEE---EEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 446899999999999999999998876 44667788854 3456789999998765432 1234566666654
No 39
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=95.62 E-value=0.016 Score=53.55 Aligned_cols=83 Identities=17% Similarity=0.150 Sum_probs=65.3
Q ss_pred CccccCCcCCccccccCCCceeEEeeeCCCcccCccCHHHHHhhCC-CceeeEEeeCCCCCccchhhcccchhHHHHHHH
Q psy3845 81 NWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLP-NVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVV 159 (167)
Q Consensus 81 N~~~Yg~~~PP~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~-n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii 159 (167)
|...|-+..| .+...+|++|+.|++|.+|.-++.+..+.+.+.|. +.+.+..+.+|+-+|---- .+.+..++.+++
T Consensus 534 ~~~~~~~~sp-~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~~~~~~~~~~~ 610 (620)
T COG1506 534 DREKYEDRSP-IFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR--PENRVKVLKEIL 610 (620)
T ss_pred ChHHHHhcCh-hhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC--chhHHHHHHHHH
Confidence 5566655554 66779999999999999999999999999988876 4455666778888885333 566667899999
Q ss_pred HHHhhhc
Q psy3845 160 RVLHKYN 166 (167)
Q Consensus 160 ~~l~~~~ 166 (167)
++++++.
T Consensus 611 ~~~~~~~ 617 (620)
T COG1506 611 DWFKRHL 617 (620)
T ss_pred HHHHHHh
Confidence 9998864
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=95.62 E-value=0.024 Score=47.15 Aligned_cols=63 Identities=17% Similarity=0.272 Sum_probs=48.0
Q ss_pred cccCC-CceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 94 RLSNV-KVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 94 ~l~~i-~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
.+.++ ++|+.+++|.+|.+++++..+.+.+.+|+.. .+.+++-+|.-+ .+.+.+.|++.++.+
T Consensus 242 ~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~---~~~~~~~gH~~~------~~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 242 NISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAE---LKVTNNAGHSAF------DPNNLAALVHALETY 305 (306)
T ss_pred hhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCE---EEEECCCCCCCC------ChHHHHHHHHHHHHh
Confidence 35667 5999999999999999999999999999743 333568899853 333557777777654
No 41
>KOG3043|consensus
Probab=95.54 E-value=0.024 Score=46.62 Aligned_cols=82 Identities=18% Similarity=0.175 Sum_probs=56.5
Q ss_pred ccCCcCCccccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceee-EEeeCCCCCccchhh---------cccchhH
Q psy3845 84 KYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGK-YKVPLKRFNHLDFMW---------AIDVKKL 153 (167)
Q Consensus 84 ~Yg~~~PP~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~-~~~~~~~~~HlDFi~---------~~~a~~~ 153 (167)
.||+..- .=|..++++||.+..|++|.+++++||..+.++|.+...+ +.+..-.=.|-.|+- .+.+.++
T Consensus 150 ~hps~~d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~ee 228 (242)
T KOG3043|consen 150 FHPSFVD-SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEE 228 (242)
T ss_pred ecCCcCC-hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHH
Confidence 3454433 3467889999999999999999999998877776543321 233332333445664 2456788
Q ss_pred HHHHHHHHHhhhc
Q psy3845 154 LYDDVVRVLHKYN 166 (167)
Q Consensus 154 vy~~ii~~l~~~~ 166 (167)
.|.++++++++|-
T Consensus 229 a~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 229 AYQRFISWFKHYL 241 (242)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998874
No 42
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=95.46 E-value=0.029 Score=47.69 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=49.2
Q ss_pred ccCC--CceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 95 LSNV--KVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 95 l~~i--~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
+.++ ++|+.+++|++|.+++++..+.+.+++... .+..+.+++..|.-+.= . -++.|+++|+++|+
T Consensus 264 ~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~-~~~l~~~~g~~H~i~~E-~-~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 264 IDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSIS-NKELHTLEDMDHVITIE-P-GNEEVLKKIIEWIS 331 (332)
T ss_pred HhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCC-CcEEEEECCCCCCCccC-C-CHHHHHHHHHHHhh
Confidence 4455 699999999999999999999888877531 11234467888877643 2 26779999999885
No 43
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=95.41 E-value=0.019 Score=49.55 Aligned_cols=100 Identities=19% Similarity=0.250 Sum_probs=71.0
Q ss_pred HHhhcCCCceeecc-------cCCccCccccCCcCCccccccCCCceeEEeeeCCCcccCccCHHHHHh-hCCCceeeEE
Q psy3845 62 YYLLVPDRTFQQYD-------LGWLGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSR-KLPNVVGKYK 133 (167)
Q Consensus 62 ~~Q~~~sg~F~~yD-------yG~~~N~~~Yg~~~PP~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~-~L~n~~~~~~ 133 (167)
-.|+.+..+++.|| .|...=...|.+..+ ..-|.+|.+|+.+.+..+|.+.+++++..... ..|++. .
T Consensus 231 ~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs-~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~---l 306 (345)
T COG0429 231 LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASS-LPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVL---L 306 (345)
T ss_pred HHHHHhhchHHhccceeeecccCCCcHHHHHHhccc-cccccccccceEEEecCCCCCCChhhCCcchhcCCCceE---E
Confidence 45666677899999 454333444544433 45689999999999999999999999988877 456654 2
Q ss_pred eeCCCCCccchhhcccchh--HHHHHHHHHHhhh
Q psy3845 134 VPLKRFNHLDFMWAIDVKK--LLYDDVVRVLHKY 165 (167)
Q Consensus 134 ~~~~~~~HlDFi~~~~a~~--~vy~~ii~~l~~~ 165 (167)
..-+.-+|+.|+=++.... -.=+.|++.++.+
T Consensus 307 ~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 307 QLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred EeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 2346889999998755444 2345677777665
No 44
>KOG1455|consensus
Probab=95.37 E-value=0.027 Score=48.10 Aligned_cols=70 Identities=16% Similarity=0.190 Sum_probs=54.3
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhh--cccchhHHHHHHHHHHhhh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMW--AIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~--~~~a~~~vy~~ii~~l~~~ 165 (167)
++.+|++|+.+.+|+.|.++|++-.+.|.++=+..- +..+-+|+.=|- .+. -....+.|+.+|+++|++.
T Consensus 241 ~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~D-KTlKlYpGm~H~-Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 241 NLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSD-KTLKLYPGMWHS-LLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred hcccccccEEEEecCCCcccCcHHHHHHHHhccCCC-CceeccccHHHH-hhcCCCchhHHHHHHHHHHHHHhc
Confidence 467899999999999999999999999998876532 333446776663 343 4567788999999999863
No 45
>PRK03204 haloalkane dehalogenase; Provisional
Probab=95.33 E-value=0.036 Score=45.77 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=44.8
Q ss_pred CceeEEeeeCCCcccCccCH-HHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHH
Q psy3845 99 KVPVALFYSNNDWLAPGEDV-DVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVL 162 (167)
Q Consensus 99 ~~Pv~l~~g~~D~L~~~~Dv-~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l 162 (167)
++|+.+.+|++|.++.+.++ +.+.+.+|+.. .+.+++-+|.=.+ +..+.+.+.|.+++
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~---~~~i~~aGH~~~~---e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFPDHV---LVELPNAKHFIQE---DAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcCCCe---EEEcCCCcccccc---cCHHHHHHHHHHhc
Confidence 89999999999999988774 77888999853 3346789998443 67777777766654
No 46
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=95.26 E-value=0.013 Score=42.28 Aligned_cols=51 Identities=29% Similarity=0.415 Sum_probs=39.0
Q ss_pred CccccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCcc
Q psy3845 90 PPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHL 142 (167)
Q Consensus 90 PP~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~Hl 142 (167)
|..-++.+.++|+.+.+|++|.++++++++.+.++++.-.+. +.+++-+|.
T Consensus 95 ~~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~--~~i~g~~H~ 145 (145)
T PF12695_consen 95 PDSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKEL--YIIPGAGHF 145 (145)
T ss_dssp SGCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEE--EEETTS-TT
T ss_pred cchhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEE--EEeCCCcCc
Confidence 334568889999999999999999999999999999843433 445787773
No 47
>KOG1454|consensus
Probab=95.20 E-value=0.047 Score=46.77 Aligned_cols=65 Identities=20% Similarity=0.344 Sum_probs=51.6
Q ss_pred ccCCC-ceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 95 LSNVK-VPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 95 l~~i~-~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
+.+|. +||.++||+.|.+++.+..+.+.+++||.. ...+++-+|+=-+ +.++.+.+.|..++...
T Consensus 259 ~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~---~~~I~~~gH~~h~---e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 259 IKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAE---LVEIPGAGHLPHL---ERPEEVAALLRSFIARL 324 (326)
T ss_pred hccccCCceEEEEcCcCCccCHHHHHHHHhhCCCce---EEEeCCCCccccc---CCHHHHHHHHHHHHHHh
Confidence 34555 999999999999999999999999998854 3345788998766 67777777777777654
No 48
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=95.20 E-value=0.048 Score=46.05 Aligned_cols=73 Identities=12% Similarity=0.051 Sum_probs=56.3
Q ss_pred ccccCCCceeEEeeeCCCcccC-ccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhhc
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAP-GEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~-~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~~ 166 (167)
-+-.++++||.|++|++|.+++ .+....+.+++..-. +..+.+++.-|-=|.=....++.+++++.+.+.+..
T Consensus 222 ~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~-~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 222 RDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPD-KELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred hccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCC-ceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 3467789999999999999999 677777777664321 345667899997666666666899999999998753
No 49
>PRK10566 esterase; Provisional
Probab=95.05 E-value=0.043 Score=43.66 Aligned_cols=64 Identities=16% Similarity=0.097 Sum_probs=48.5
Q ss_pred ccCC-CceeEEeeeCCCcccCccCHHHHHhhCCCce---eeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 95 LSNV-KVPVALFYSNNDWLAPGEDVDVLSRKLPNVV---GKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 95 l~~i-~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~---~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
+.++ +.|+.+++|++|.++++++.+.+.+.|+... ....+.+++-+|. + . ...+++++++|+++
T Consensus 181 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~-~--~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 181 LEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHR-I--T----PEALDAGVAFFRQH 248 (249)
T ss_pred hhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCc-c--C----HHHHHHHHHHHHhh
Confidence 4566 6999999999999999999999998886421 1234456788996 2 1 34678999999864
No 50
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=95.01 E-value=0.059 Score=47.15 Aligned_cols=68 Identities=21% Similarity=0.309 Sum_probs=48.9
Q ss_pred ccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhhc
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~~ 166 (167)
..+.+|++||.+++|++|++. ++..+.+....+.-.+ .+.+++-+|..++ +..+.+++.|+++++.+-
T Consensus 319 ~~l~~I~vP~liI~G~~D~i~-~~~~~~~~~~~~~~~~--~~~i~~aGH~~~~---E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 319 ESASEWKVPTTFIYGRHDWMN-YEGAVEARKRMKVPCE--IIRVPQGGHFVFL---DNPSGFHSAVLYACRKYL 386 (402)
T ss_pred hhcccCCCCEEEEEeCCCCCC-cHHHHHHHHHcCCCCc--EEEeCCCCCeeec---cCHHHHHHHHHHHHHHhc
Confidence 457889999999999999976 4666666666643232 3456799998665 345667788888887663
No 51
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=94.47 E-value=0.064 Score=40.82 Aligned_cols=62 Identities=16% Similarity=0.225 Sum_probs=43.8
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHH
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVL 162 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l 162 (167)
.+.++++|+.+.+|++|.++. +..+.+.+.+++.. .+.+++-+|.-++ +..+.+.+.|.++|
T Consensus 189 ~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~---~~~~~~~gH~~~~---e~~~~~~~~i~~~l 250 (251)
T TIGR03695 189 KLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLT---LVIIANAGHNIHL---ENPEAFAKILLAFL 250 (251)
T ss_pred HhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCc---EEEEcCCCCCcCc---cChHHHHHHHHHHh
Confidence 367899999999999998773 44566777788753 3345788996554 33556667776665
No 52
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=94.39 E-value=0.097 Score=46.13 Aligned_cols=61 Identities=13% Similarity=0.078 Sum_probs=46.2
Q ss_pred cCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 96 SNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 96 ~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
.++++|+.+.+|++|.++++++.+.+.+..|+... +.+++--|. ...+++.+.|+++|++.
T Consensus 352 ~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l---~~i~~~~~~------e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 352 RRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKL---LEIPFKPVY------RNFDKALQEISDWLEDR 412 (414)
T ss_pred cCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeE---EEccCCCcc------CCHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999888887542 233442111 25577888898888764
No 53
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=94.30 E-value=0.048 Score=48.50 Aligned_cols=58 Identities=26% Similarity=0.233 Sum_probs=47.1
Q ss_pred ccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhc--ccchhH
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWA--IDVKKL 153 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~--~~a~~~ 153 (167)
-||++|++||+.++|++|.+++++.|....+.++|-+ ..+ .-.-+|+.-+.+ -+++..
T Consensus 324 VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~--~f~-l~~sGHIa~vVN~p~~~k~~ 383 (445)
T COG3243 324 VDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEV--TFV-LSRSGHIAGVVNPPGNAKYQ 383 (445)
T ss_pred echhhcccceEEEeecccccCCHHHHHHHHHhcCCce--EEE-EecCceEEEEeCCcchhhhh
Confidence 7999999999999999999999999999999999833 222 347899998888 444433
No 54
>PRK13604 luxD acyl transferase; Provisional
Probab=94.18 E-value=0.047 Score=46.67 Aligned_cols=49 Identities=18% Similarity=0.156 Sum_probs=38.9
Q ss_pred ccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCcc
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHL 142 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~Hl 142 (167)
-.+++++.|+.+++|++|.+++++.++.+.+.+++.. +..+.+++-+|.
T Consensus 196 ~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~-kkl~~i~Ga~H~ 244 (307)
T PRK13604 196 NKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQ-CKLYSLIGSSHD 244 (307)
T ss_pred HHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCC-cEEEEeCCCccc
Confidence 3366788999999999999999999999999987522 234556787774
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=94.10 E-value=0.051 Score=44.72 Aligned_cols=63 Identities=21% Similarity=0.223 Sum_probs=46.3
Q ss_pred ccCCCceeEEeeeCCCcccCccCH------HHHHhhC--CCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDV------DVLSRKL--PNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv------~~L~~~L--~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
|..+++|+.++||..|..++ +-. .+..+.+ +++ ..+.+++-.| ++--.+++++|++.|.++|+
T Consensus 203 l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v---~~~~~~~~~H--~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 203 LERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGI---ERVEIDGADH--TFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCe---EEEecCCCCc--ccccHHHHHHHHHHHHHHHh
Confidence 55789999999999999863 211 2333445 553 3456789999 66678888999999999885
No 56
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=94.09 E-value=0.078 Score=48.42 Aligned_cols=84 Identities=19% Similarity=0.286 Sum_probs=59.8
Q ss_pred cCccccCCc---CCccccccCCCceeEEeeeCCCcccCccCH-HHHHhhCCCc--------eeeEEeeCCCCCccchhhc
Q psy3845 80 GNWRKYGQL---RPPSYRLSNVKVPVALFYSNNDWLAPGEDV-DVLSRKLPNV--------VGKYKVPLKRFNHLDFMWA 147 (167)
Q Consensus 80 ~N~~~Yg~~---~PP~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv-~~L~~~L~n~--------~~~~~~~~~~~~HlDFi~~ 147 (167)
+|...=|+. .=-..||.+|++||++|.|..|.+++|+.+ .|+.+--++. ..+|. ..+.-+||....+
T Consensus 275 gNrL~~g~~~~~~G~~~DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~-~h~~vGHLGIFVS 353 (581)
T PF11339_consen 275 GNRLAKGEFRVSDGRRVDLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYL-LHESVGHLGIFVS 353 (581)
T ss_pred cchhccCceeccCCcEeehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEE-ecCCCCceEEEec
Confidence 455554543 224689999999999999999999999986 4544433432 22333 3578999997777
Q ss_pred ccchhHHHHHHHHHHhh
Q psy3845 148 IDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 148 ~~a~~~vy~~ii~~l~~ 164 (167)
-.+..+=..+|++.|+.
T Consensus 354 ~~VarkEH~~i~~~ld~ 370 (581)
T PF11339_consen 354 GKVARKEHREIASNLDL 370 (581)
T ss_pred cHhhHHHHHHHHHHHHH
Confidence 77776677888887764
No 57
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=93.49 E-value=0.17 Score=44.20 Aligned_cols=61 Identities=16% Similarity=0.146 Sum_probs=46.5
Q ss_pred cCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 96 SNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 96 ~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
.+|++||.+++|+.|.+++++..+.+.+. ++.. .+.+++-+|+=.. +..+.+.+.|.++|+
T Consensus 322 ~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~---l~vIp~aGH~~~~---E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 322 KNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHK---LIELPMAGHHVQE---DCGEELGGIISGILS 382 (383)
T ss_pred ccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCe---EEEECCCCCCcch---hCHHHHHHHHHHHhh
Confidence 35899999999999999998878877776 3432 3446788895443 778888888888775
No 58
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=93.34 E-value=0.17 Score=40.20 Aligned_cols=74 Identities=18% Similarity=0.146 Sum_probs=55.5
Q ss_pred ccccccCCC-ceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 91 PSYRLSNVK-VPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 91 P~Y~l~~i~-~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
+.-++.+|. .|+.+++|.+|..++..+.+.+.+....- .......++.+|.+.-......+....++.+.+.+.
T Consensus 223 ~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 223 PFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER-PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred chhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC-CceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 344566777 79999999999999999999888877652 223344578889999855555556778888888765
No 59
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=92.78 E-value=0.16 Score=42.57 Aligned_cols=62 Identities=23% Similarity=0.345 Sum_probs=43.2
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
.+.++++|+.+++|++|.+++++..+.+ +... ....+++-+|+-++ +..+.+.+.|.+++++
T Consensus 309 ~l~~i~~Pvlii~g~~D~~vp~~~~~~l----~~~~--~~~~~~~~gH~~~~---e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 309 RLASLAIPVLVIWGEQDRIIPAAHAQGL----PDGV--AVHVLPGAGHMPQM---EAAADVNRLLAEFLGK 370 (371)
T ss_pred HHhcCCCCEEEEEECCCCccCHHHHhhc----cCCC--eEEEeCCCCCChhh---hCHHHHHHHHHHHhcc
Confidence 4678999999999999999987765443 3222 23346789997553 3456677777777764
No 60
>PRK05855 short chain dehydrogenase; Validated
Probab=92.58 E-value=0.21 Score=44.35 Aligned_cols=64 Identities=23% Similarity=0.206 Sum_probs=46.0
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
+.++++|+.+++|++|.+++++..+.+.+.+|+.. .. .++ -+|+-+. ...+.+.+.|.+++.+.
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~--~~~-~gH~~~~---e~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLW-RR--EIK-AGHWLPM---SHPQVLAAAVAEFVDAV 292 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHhccccccCCcce-EE--Ecc-CCCcchh---hChhHHHHHHHHHHHhc
Confidence 55689999999999999999998888888888743 22 223 4787663 34555666666676653
No 61
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.20 E-value=0.27 Score=40.08 Aligned_cols=83 Identities=22% Similarity=0.222 Sum_probs=54.7
Q ss_pred cccCCcCCcccc-ccCCCceeEEeeeCCCcccCccCHHHHHhhCCCc-eeeEEeeCCCCCccc--------hhhcccchh
Q psy3845 83 RKYGQLRPPSYR-LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNV-VGKYKVPLKRFNHLD--------FMWAIDVKK 152 (167)
Q Consensus 83 ~~Yg~~~PP~Y~-l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~-~~~~~~~~~~~~HlD--------Fi~~~~a~~ 152 (167)
-.||+..++.-. -.++++||.+.+|++|...+.++++.+.+.+... +......++.-+|-= ..+-..+.+
T Consensus 141 ~fyg~~~~~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~ 220 (236)
T COG0412 141 AFYGGLIADDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAE 220 (236)
T ss_pred EecCCCCCCcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHH
Confidence 346655433322 4689999999999999999999999998888643 122222222322321 234455677
Q ss_pred HHHHHHHHHHhhh
Q psy3845 153 LLYDDVVRVLHKY 165 (167)
Q Consensus 153 ~vy~~ii~~l~~~ 165 (167)
+-++++++++++.
T Consensus 221 ~a~~~~~~ff~~~ 233 (236)
T COG0412 221 DAWQRVLAFFKRL 233 (236)
T ss_pred HHHHHHHHHHHHh
Confidence 7888899888765
No 62
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=92.00 E-value=0.17 Score=46.31 Aligned_cols=53 Identities=25% Similarity=0.196 Sum_probs=43.3
Q ss_pred ccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcc
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAI 148 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~ 148 (167)
-+|++|++|+.+++|+.|.+++++-++.+.+.+++... ..++.-+|+-.+-..
T Consensus 409 ~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~---~vL~~sGHi~~ienP 461 (532)
T TIGR01838 409 LDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKT---FVLGESGHIAGVVNP 461 (532)
T ss_pred cchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEE---EEECCCCCchHhhCC
Confidence 57999999999999999999999999999999997542 345788888665443
No 63
>KOG4178|consensus
Probab=91.62 E-value=0.47 Score=40.85 Aligned_cols=100 Identities=12% Similarity=0.307 Sum_probs=66.1
Q ss_pred hHHHHHhhcCCCcee-ecccCCccCccccCCcCCccccccCCCceeEEeeeCCCcccCccCH-HHHHhhCCCceeeEEee
Q psy3845 58 LFILYYLLVPDRTFQ-QYDLGWLGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDV-DVLSRKLPNVVGKYKVP 135 (167)
Q Consensus 58 ~~~H~~Q~~~sg~F~-~yDyG~~~N~~~Yg~~~PP~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv-~~L~~~L~n~~~~~~~~ 135 (167)
.+.-|.+....+.|. .++| .+|+.++-. .-.--+.+|++||.++||.+|..-+..-. +...+.+|+..+ .+.
T Consensus 220 di~~~~~~f~~~g~~gplNy--yrn~~r~w~--a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~--~vv 293 (322)
T KOG4178|consen 220 DIAFYVSKFQIDGFTGPLNY--YRNFRRNWE--AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTE--RVV 293 (322)
T ss_pred HHHHHHhccccccccccchh--hHHHhhCch--hccccccccccceEEEEecCcccccchhHHHHHHHhhccccc--eEE
Confidence 344444443333343 3333 467766632 22456789999999999999999988743 345556788753 334
Q ss_pred CCCCCccchhhcccchhHHHHHHHHHHhhhc
Q psy3845 136 LKRFNHLDFMWAIDVKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 136 ~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~~ 166 (167)
+++-+|. --.+-.+.|.+.|+++|++++
T Consensus 294 ~~~~gH~---vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 294 IEGIGHF---VQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred ecCCccc---ccccCHHHHHHHHHHHHHhhc
Confidence 4566664 456778889999999999875
No 64
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=91.56 E-value=0.49 Score=37.02 Aligned_cols=59 Identities=10% Similarity=0.105 Sum_probs=40.0
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
.+.+|++|+.+++|++|.++ ..+.++ ++. ..+.+++.+|+=+ .+..+.+.+.|.+++++
T Consensus 183 ~l~~i~~P~lii~G~~D~~~-----~~~~~~-~~~---~~~~i~~~gH~~~---~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 183 ALQALTFPFYYLCGERDSKF-----QALAQQ-LAL---PLHVIPNAGHNAH---RENPAAFAASLAQILRL 241 (242)
T ss_pred HhhccCCCeEEEEeCCcchH-----HHHHHH-hcC---eEEEeCCCCCchh---hhChHHHHHHHHHHHhh
Confidence 46789999999999999854 234433 232 2344689999433 25566677778777764
No 65
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=90.12 E-value=0.52 Score=41.29 Aligned_cols=55 Identities=25% Similarity=0.415 Sum_probs=46.4
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccc
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDV 150 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a 150 (167)
|++|++|+.++--..|||-++++.+.+.+.|+.....+.+ ...++|-.|+.-...
T Consensus 302 l~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i-~S~~GHDaFL~e~~~ 356 (368)
T COG2021 302 LARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREI-DSPYGHDAFLVESEA 356 (368)
T ss_pred HhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEe-cCCCCchhhhcchhh
Confidence 8889999999999999999999999999999975543344 456799999976655
No 66
>COG1647 Esterase/lipase [General function prediction only]
Probab=90.10 E-value=0.34 Score=39.97 Aligned_cols=67 Identities=18% Similarity=0.260 Sum_probs=49.7
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhccc-chhHHHHHHHHHHhh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAID-VKKLLYDDVVRVLHK 164 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~-a~~~vy~~ii~~l~~ 164 (167)
+++.|.+|+.+..|++|.+++.+.++.+.+.+-.... ...-+++-+| +...| -++.|.+.|+++|++
T Consensus 176 ~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~K-eL~~~e~SgH---VIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 176 SLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDK-ELKWLEGSGH---VITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred hhhhcccchhheecccCCCCCHHHHHHHHHhccCCcc-eeEEEccCCc---eeecchhHHHHHHHHHHHhhC
Confidence 4778999999999999999999999999988765332 2222345555 33333 467799999998863
No 67
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=89.95 E-value=0.54 Score=48.41 Aligned_cols=69 Identities=12% Similarity=0.114 Sum_probs=51.9
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCce---------eeEEeeCCCCCccchhhcccchhHHHHHHHHHHhh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVV---------GKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~---------~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
.|.+|++|+.+++|++|.+.. +..+.+.+.+++.. ....+.+++-+|+=++ +..+.+.+.|.++|++
T Consensus 1563 ~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l---E~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1563 DLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL---ENPLPVIRALRKFLTR 1638 (1655)
T ss_pred HHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHH---HCHHHHHHHHHHHHHh
Confidence 388999999999999999873 55567788888631 1234567899998776 5666788888888876
Q ss_pred hc
Q psy3845 165 YN 166 (167)
Q Consensus 165 ~~ 166 (167)
.+
T Consensus 1639 ~~ 1640 (1655)
T PLN02980 1639 LH 1640 (1655)
T ss_pred cc
Confidence 53
No 68
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=89.25 E-value=0.41 Score=44.16 Aligned_cols=51 Identities=22% Similarity=0.151 Sum_probs=39.9
Q ss_pred cccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchh
Q psy3845 92 SYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFM 145 (167)
Q Consensus 92 ~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi 145 (167)
.-||++|++|++.+.|.+|.+|+++.+..+...+..-+ ..+ .-.-+|+.=|
T Consensus 434 ~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~--~fv-l~~gGHIggi 484 (560)
T TIGR01839 434 PIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKR--RFV-LSNSGHIQSI 484 (560)
T ss_pred EechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCe--EEE-ecCCCccccc
Confidence 37899999999999999999999999999988887632 222 2356676433
No 69
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=89.22 E-value=0.44 Score=45.48 Aligned_cols=71 Identities=18% Similarity=0.068 Sum_probs=47.2
Q ss_pred cccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCc-eeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 92 SYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNV-VGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 92 ~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~-~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
..++++|++|+.+.+|.+|+.+.++.+..+.+.|... ..+. +-+..++|...-.. -+....+.+++++.++
T Consensus 448 ~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkk-L~l~~g~H~~~~~~--~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 448 LKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKK-LFLHQGGHVYPNNW--QSIDFRDTMNAWFTHK 519 (767)
T ss_pred hhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeE-EEEeCCCccCCCch--hHHHHHHHHHHHHHhc
Confidence 3457889999999999999999998887777777431 1112 22347788643221 1334556777777655
No 70
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=89.01 E-value=0.64 Score=36.67 Aligned_cols=59 Identities=17% Similarity=0.115 Sum_probs=38.7
Q ss_pred CceeEEeeeCCCcccCccCHHHHHhhCCCce-eeEEeeCCCCCccchhhcccchhHHHHHHHHHHhh
Q psy3845 99 KVPVALFYSNNDWLAPGEDVDVLSRKLPNVV-GKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 99 ~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~-~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
.+||.+.+|.+|.+++.+..+.+.+.|.+.. ......+++-+| .......+++.++|++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH-------~i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGH-------EISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SS-------S--HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCC-------CCCHHHHHHHHHHHhh
Confidence 5899999999999999988887777664322 234445566788 3344566778887765
No 71
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=88.73 E-value=0.27 Score=39.38 Aligned_cols=75 Identities=15% Similarity=0.320 Sum_probs=42.1
Q ss_pred ccccccCCCceeEEeeeCCCcccCccCHH-HHHhhCCCc---eeeEEeeCCCCCcc---------c----------hhhc
Q psy3845 91 PSYRLSNVKVPVALFYSNNDWLAPGEDVD-VLSRKLPNV---VGKYKVPLKRFNHL---------D----------FMWA 147 (167)
Q Consensus 91 P~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~-~L~~~L~n~---~~~~~~~~~~~~Hl---------D----------Fi~~ 147 (167)
-..++++|+.|+.|+.|+.|.+.+..... .+.++|... .....+.+++-+|+ . ..||
T Consensus 107 a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~G 186 (213)
T PF08840_consen 107 ARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWG 186 (213)
T ss_dssp CB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--
T ss_pred ccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCC
Confidence 35689999999999999999999888753 344444321 11233445566665 2 1232
Q ss_pred cc------chhHHHHHHHHHHhhh
Q psy3845 148 ID------VKKLLYDDVVRVLHKY 165 (167)
Q Consensus 148 ~~------a~~~vy~~ii~~l~~~ 165 (167)
-. |.+.-+++++++|++.
T Consensus 187 G~~~~~a~A~~dsW~~~l~Fl~~~ 210 (213)
T PF08840_consen 187 GEPEAHAKAQEDSWKKILEFLRKH 210 (213)
T ss_dssp B-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHH
Confidence 22 6677889999999875
No 72
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=88.72 E-value=1.2 Score=36.51 Aligned_cols=60 Identities=20% Similarity=0.397 Sum_probs=45.2
Q ss_pred CC-CceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 97 NV-KVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 97 ~i-~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
.+ ++|+.+.+|++|..++++..+.+.+++|.. .... ++ -+|.=|+ ...+.|-+-|+++.+
T Consensus 208 ~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~-~~~~--l~-~gH~p~l---s~P~~~~~~i~~~a~ 268 (273)
T PLN02211 208 DIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPS-QVYE--LE-SDHSPFF---STPFLLFGLLIKAAA 268 (273)
T ss_pred ccCccceEEEEeCCCCCCCHHHHHHHHHhCCcc-EEEE--EC-CCCCccc---cCHHHHHHHHHHHHH
Confidence 45 789999999999999999889999999875 2333 34 5898887 556656555555544
No 73
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=87.45 E-value=1.6 Score=32.49 Aligned_cols=55 Identities=24% Similarity=0.318 Sum_probs=40.7
Q ss_pred ccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhccc
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAID 149 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~ 149 (167)
..+.++++|+.+.+|.+|.+.+..........+++ ....+.+++-+|........
T Consensus 215 ~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~ 269 (282)
T COG0596 215 AALARITVPTLIIHGEDDPVVPAELARRLAAALPN--DARLVVIPGAGHFPHLEAPE 269 (282)
T ss_pred hhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC--CceEEEeCCCCCcchhhcHH
Confidence 45677889999999999955555445667777776 22345578999999888776
No 74
>PRK11460 putative hydrolase; Provisional
Probab=87.44 E-value=1.6 Score=35.12 Aligned_cols=61 Identities=10% Similarity=-0.015 Sum_probs=41.7
Q ss_pred CCCceeEEeeeCCCcccCccCHHHHHhhCCCc-eeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhh
Q psy3845 97 NVKVPVALFYSNNDWLAPGEDVDVLSRKLPNV-VGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 97 ~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~-~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
..++|+.+++|.+|.+++.+..+.+.+.|... .......+++-+|. + .....+.+.+.|++
T Consensus 146 ~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~---i----~~~~~~~~~~~l~~ 207 (232)
T PRK11460 146 PTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHA---I----DPRLMQFALDRLRY 207 (232)
T ss_pred cCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCC---C----CHHHHHHHHHHHHH
Confidence 45799999999999999999999888877532 12233445778886 1 22334555555554
No 75
>KOG1838|consensus
Probab=87.14 E-value=1.2 Score=39.63 Aligned_cols=99 Identities=21% Similarity=0.347 Sum_probs=65.1
Q ss_pred HHhhcCCCceeecc-------cCCccCccccCCcCCccccccCCCceeEEeeeCCCcccCccCHHH-HHhhCCCceeeEE
Q psy3845 62 YYLLVPDRTFQQYD-------LGWLGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDV-LSRKLPNVVGKYK 133 (167)
Q Consensus 62 ~~Q~~~sg~F~~yD-------yG~~~N~~~Yg~~~PP~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~-L~~~L~n~~~~~~ 133 (167)
|-++.++..-+.|| ||.. +..-|=+..-+.-.+.+|++|+....+.+|.+++++++-+ ...+-||+..
T Consensus 279 ~d~~~~~~SvreFD~~~t~~~~gf~-~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l--- 354 (409)
T KOG1838|consen 279 FDVILKSRSVREFDEALTRPMFGFK-SVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLL--- 354 (409)
T ss_pred hhhhhhcCcHHHHHhhhhhhhcCCC-cHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEE---
Confidence 44555566677777 4433 3444433333455689999999999999999999999854 5667788753
Q ss_pred eeCCCCCccchhhcccchhHH-HHH-HHHHHhh
Q psy3845 134 VPLKRFNHLDFMWAIDVKKLL-YDD-VVRVLHK 164 (167)
Q Consensus 134 ~~~~~~~HlDFi~~~~a~~~v-y~~-ii~~l~~ 164 (167)
+.-..-+|+.|+=|..+.... .++ +.+.+.+
T Consensus 355 ~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 355 VITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred EEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 334688999999885322222 234 4555443
No 76
>KOG2984|consensus
Probab=86.31 E-value=1.6 Score=35.93 Aligned_cols=66 Identities=15% Similarity=0.028 Sum_probs=45.1
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
-|.+|++|+.+.+|+.|.++...-|-++...++-. +++.. ++-.|-= -..-.+..+..+.+++++.
T Consensus 211 ~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a-~~~~~--peGkHn~---hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 211 VLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA-KVEIH--PEGKHNF---HLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred hcccccCCeeEeeCCcCCCCCCCCccchhhhcccc-eEEEc--cCCCcce---eeechHHHHHHHHHHHhcc
Confidence 37789999999999999999999999988777653 23322 3444421 1122345666777777764
No 77
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=86.14 E-value=1.4 Score=38.67 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=69.2
Q ss_pred hhHHHHHhhcC-CCceeecccCCccCccccC---------CcCCccccccCCCceeEEeeeCCCcccCccCHHHHHhhCC
Q psy3845 57 NLFILYYLLVP-DRTFQQYDLGWLGNWRKYG---------QLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLP 126 (167)
Q Consensus 57 k~~~H~~Q~~~-sg~F~~yDyG~~~N~~~Yg---------~~~PP~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~ 126 (167)
+++.|..|... .=.|+..||-..+=.+.=+ =..|-.|. ++++.|-+++.|.+|..-.|++...-.++||
T Consensus 211 ~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~-~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~ 289 (367)
T PF10142_consen 211 ANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYR-DRLTMPKYIINATGDEFFVPDSSNFYYDKLP 289 (367)
T ss_pred HHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHH-HhcCccEEEEecCCCceeccCchHHHHhhCC
Confidence 79999999987 4457777874321111111 24566665 6779999999999999999999999999999
Q ss_pred CceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhh
Q psy3845 127 NVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 127 n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
..+ +..-+|+-+|---- ..+...++.+++.
T Consensus 290 G~K--~lr~vPN~~H~~~~------~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 290 GEK--YLRYVPNAGHSLIG------SDVVQSLRAFYNR 319 (367)
T ss_pred CCe--eEEeCCCCCcccch------HHHHHHHHHHHHH
Confidence 855 34446899997543 3344555555443
No 78
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=84.35 E-value=3.4 Score=29.21 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=38.8
Q ss_pred CCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchh
Q psy3845 98 VKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFM 145 (167)
Q Consensus 98 i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi 145 (167)
-+.||.+..|+.|..++.+..+.+.++|++.. .+..+..+|--+.
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~---lvt~~g~gHg~~~ 77 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGSR---LVTVDGAGHGVYA 77 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCce---EEEEeccCcceec
Confidence 35999999999999999999999999999843 3455688999886
No 79
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=83.71 E-value=1.2 Score=37.38 Aligned_cols=47 Identities=26% Similarity=0.236 Sum_probs=36.5
Q ss_pred CceeEEeeeCCCcccCccCHHHHHhhCC-Cc-eeeEEeeCCCCCccchh
Q psy3845 99 KVPVALFYSNNDWLAPGEDVDVLSRKLP-NV-VGKYKVPLKRFNHLDFM 145 (167)
Q Consensus 99 ~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~-n~-~~~~~~~~~~~~HlDFi 145 (167)
++||.+++|..|.++++.+++.+.+++- +- ..+....++.-+|..-+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~ 267 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA 267 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh
Confidence 6899999999999999999999988862 22 23345566778898743
No 80
>KOG4667|consensus
Probab=82.13 E-value=1.8 Score=35.84 Aligned_cols=42 Identities=19% Similarity=0.229 Sum_probs=34.3
Q ss_pred CCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCcc
Q psy3845 98 VKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHL 142 (167)
Q Consensus 98 i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~Hl 142 (167)
.++||.-.||..|.+++.+|...+++.+|| ...+.+ +.-+|-
T Consensus 198 ~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iI--EgADHn 239 (269)
T KOG4667|consen 198 KQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEII--EGADHN 239 (269)
T ss_pred ccCceEEEeccCCceeechhHHHHHHhccC-CceEEe--cCCCcC
Confidence 459999999999999999999999999999 333433 465553
No 81
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=80.70 E-value=4.8 Score=33.67 Aligned_cols=68 Identities=15% Similarity=0.180 Sum_probs=47.3
Q ss_pred ccCccccCCcCCccccc--cCC--CceeEEeeeCCCc--------ccCccCH--HHHHhhCCCceeeEEeeCCCCCccch
Q psy3845 79 LGNWRKYGQLRPPSYRL--SNV--KVPVALFYSNNDW--------LAPGEDV--DVLSRKLPNVVGKYKVPLKRFNHLDF 144 (167)
Q Consensus 79 ~~N~~~Yg~~~PP~Y~l--~~i--~~Pv~l~~g~~D~--------L~~~~Dv--~~L~~~L~n~~~~~~~~~~~~~HlDF 144 (167)
..++...++.+|+.++. ... ++|+++.=.+-+. =+.|+++ ++..++.+.-. ..+..++|+|+||
T Consensus 130 VdG~~~~~~~~P~v~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~--~~~v~~~~GH~d~ 207 (259)
T PF12740_consen 130 VDGMSKGSQTEPPVLTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPS--WHFVAKDYGHMDF 207 (259)
T ss_pred ccccccccCCCCccccCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCE--EEEEeCCCCchHh
Confidence 34566668888988876 333 3899777655553 3677777 66788886533 4566789999999
Q ss_pred hhcc
Q psy3845 145 MWAI 148 (167)
Q Consensus 145 i~~~ 148 (167)
+=..
T Consensus 208 LDd~ 211 (259)
T PF12740_consen 208 LDDD 211 (259)
T ss_pred hcCC
Confidence 8554
No 82
>KOG1552|consensus
Probab=80.20 E-value=2.1 Score=35.81 Aligned_cols=49 Identities=20% Similarity=0.199 Sum_probs=37.4
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFM 145 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi 145 (167)
+..|++||.+.+|..|.+++..--..|.+..++-++...+ +.-+|-|..
T Consensus 188 I~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v--~g~gH~~~~ 236 (258)
T KOG1552|consen 188 ISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWV--KGAGHNDIE 236 (258)
T ss_pred ceeccCCEEEEecccCceecccccHHHHHhccccCCCcEE--ecCCCcccc
Confidence 4557799999999999999999889999988774433222 466776653
No 83
>PRK11071 esterase YqiA; Provisional
Probab=80.12 E-value=3.7 Score=32.01 Aligned_cols=55 Identities=11% Similarity=0.002 Sum_probs=40.1
Q ss_pred CCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 98 VKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 98 i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
.+.||.+.+|++|.+++.+...++.+... .+.+++-+|.---+ +++.+.|+++++
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~~------~~~~~ggdH~f~~~-----~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAACR------QTVEEGGNHAFVGF-----ERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhcc------eEEECCCCcchhhH-----HHhHHHHHHHhc
Confidence 55788999999999999999988887532 12346777765222 667778877764
No 84
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=79.82 E-value=2.4 Score=34.22 Aligned_cols=98 Identities=13% Similarity=0.194 Sum_probs=69.4
Q ss_pred HHHhhcCCCceeecccCCccCccccCCcCCccccccCCC-ceeEEeeeCCCcccCccCH---HHHHhhCCCceeeEEeeC
Q psy3845 61 LYYLLVPDRTFQQYDLGWLGNWRKYGQLRPPSYRLSNVK-VPVALFYSNNDWLAPGEDV---DVLSRKLPNVVGKYKVPL 136 (167)
Q Consensus 61 H~~Q~~~sg~F~~yDyG~~~N~~~Yg~~~PP~Y~l~~i~-~Pv~l~~g~~D~L~~~~Dv---~~L~~~L~n~~~~~~~~~ 136 (167)
.|.|.++. -||.+.-- .+.+.+-|.. -+.+.|+ +++.-.=|++|-++.+-.. ..|..-||.-...+ ...
T Consensus 101 fyL~Ti~~-VFq~~~L~-~G~~~~~Gr~----Vdp~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~-~~~ 173 (202)
T PF06850_consen 101 FYLDTIRR-VFQEHLLP-RGTWTVRGRP----VDPAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRH-HLQ 173 (202)
T ss_pred HHHHHHHH-HHHhCccc-CCceEECCEE----cchHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhh-ccc
Confidence 44455432 46665542 2333444533 5667886 7777789999999998775 34667787644433 446
Q ss_pred CCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 137 KRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 137 ~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
++-+|.+..-|...++.||+.|-++|.++
T Consensus 174 ~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 174 PGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred CCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 89999999999999999999999998764
No 85
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=79.39 E-value=2.5 Score=35.98 Aligned_cols=57 Identities=14% Similarity=0.260 Sum_probs=41.7
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
.+.+-++|+.+-||++|.|+..+.+...+.... +-.|+++ ..+..+.-.++|.+-+.
T Consensus 207 ~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~-----------~l~Hf~~--~~~~seee~~kI~~~f~ 263 (297)
T PF06342_consen 207 KLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFK-----------GLDHFNI--EKEISEEEKPKILKSFA 263 (297)
T ss_pred HhccCCCcEEEEEcCcchhhHHHHHHHHHHHhC-----------Cccceee--ecCCChhHHHHHHHHHh
Confidence 355666899999999999999998887776553 4457666 66666655667666553
No 86
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=76.53 E-value=2.7 Score=35.46 Aligned_cols=49 Identities=16% Similarity=0.186 Sum_probs=31.3
Q ss_pred cccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCc
Q psy3845 92 SYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNH 141 (167)
Q Consensus 92 ~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~H 141 (167)
.-++.++.+|+.+|.+..|.-+.+.+|+.+.+.+..-. .+....++-.|
T Consensus 188 ~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~-~klysl~Gs~H 236 (294)
T PF02273_consen 188 INDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNK-CKLYSLPGSSH 236 (294)
T ss_dssp HHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT---EEEEEETT-SS
T ss_pred HHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCc-eeEEEecCccc
Confidence 34677788999999999999999999999998775422 23344567777
No 87
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=76.18 E-value=2.6 Score=33.71 Aligned_cols=47 Identities=19% Similarity=0.199 Sum_probs=34.3
Q ss_pred CCceeEEeeeCCCcccCccCHHHHHhhCCC-ceeeEEeeCCCCCccch
Q psy3845 98 VKVPVALFYSNNDWLAPGEDVDVLSRKLPN-VVGKYKVPLKRFNHLDF 144 (167)
Q Consensus 98 i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n-~~~~~~~~~~~~~HlDF 144 (167)
..+|-..+||++|.+++.+||+.+.++-.. -..+.....++-.|..-
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H 224 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAH 224 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhh
Confidence 448999999999999999999998776432 12234455566677665
No 88
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=75.89 E-value=2.6 Score=36.02 Aligned_cols=61 Identities=16% Similarity=0.155 Sum_probs=38.0
Q ss_pred cCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhh
Q psy3845 96 SNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 96 ~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
..|++||.+-.|-.|..++|.-+-.+.+.|+.-+ ....++.++|-. ..+...++.+++|++
T Consensus 259 ~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K--~l~vyp~~~He~------~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 259 RRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPK--ELVVYPEYGHEY------GPEFQEDKQLNFLKE 319 (320)
T ss_dssp GG--SEEEEEEETT-SSS-HHHHHHHHCC--SSE--EEEEETT--SST------THHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEecCCCCCCchhHHHHHhccCCCe--eEEeccCcCCCc------hhhHHHHHHHHHHhc
Confidence 3489999999999999999999999999998754 344567888842 122224566666654
No 89
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=75.00 E-value=2 Score=37.68 Aligned_cols=50 Identities=28% Similarity=0.292 Sum_probs=40.0
Q ss_pred ccCCCceeEEeeeCCCcccCccC-HHHHHhhCCCceeeEEeeCCCCCccchh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGED-VDVLSRKLPNVVGKYKVPLKRFNHLDFM 145 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~D-v~~L~~~L~n~~~~~~~~~~~~~HlDFi 145 (167)
+.+|++|+.+.-|..|..++++. ..+....||+.. ++...+++-.|+||+
T Consensus 247 l~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~-k~~~~vp~a~h~sfl 297 (365)
T COG4188 247 LVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGAL-KYLRLVPGATHFSFL 297 (365)
T ss_pred ceeeecceeeecccccccCCcccccccccccCCcch-hheeecCCCcccccc
Confidence 67899999999999999877655 455777888853 345567899999997
No 90
>KOG4409|consensus
Probab=72.58 E-value=8.4 Score=33.79 Aligned_cols=66 Identities=20% Similarity=0.340 Sum_probs=42.8
Q ss_pred ccCCC--ceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 95 LSNVK--VPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 95 l~~i~--~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
+..++ +||.+.||++||+=..... +..++|++. .+..+.+++-+|-=| + |-.+...+-|++.+++.
T Consensus 297 ~~~l~~~~pv~fiyG~~dWmD~~~g~-~~~~~~~~~-~~~~~~v~~aGHhvy--l-Dnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 297 LRELKKDVPVTFIYGDRDWMDKNAGL-EVTKSLMKE-YVEIIIVPGAGHHVY--L-DNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHhhccCCCEEEEecCcccccchhHH-HHHHHhhcc-cceEEEecCCCceee--c-CCHHHHHHHHHHHHhcc
Confidence 44444 9999999999998655443 344444442 234556789999644 4 44555667777777653
No 91
>PRK10162 acetyl esterase; Provisional
Probab=72.16 E-value=9.5 Score=32.09 Aligned_cols=64 Identities=14% Similarity=-0.022 Sum_probs=44.4
Q ss_pred ceeEEeeeCCCcccCccCHHHHHhhCCC-ceeeEEeeCCCCCccchhhcc--cchhHHHHHHHHHHhhh
Q psy3845 100 VPVALFYSNNDWLAPGEDVDVLSRKLPN-VVGKYKVPLKRFNHLDFMWAI--DVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 100 ~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n-~~~~~~~~~~~~~HlDFi~~~--~a~~~vy~~ii~~l~~~ 165 (167)
.|+++++|+.|.|.+ +.+.+.++|.. -+.+....+++-.|-=+.++. ...+..++++.+++++.
T Consensus 249 Pp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 249 PPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred CCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 799999999999974 56777777642 123445567889996444543 33556778888888764
No 92
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=70.91 E-value=3.9 Score=31.97 Aligned_cols=32 Identities=9% Similarity=0.144 Sum_probs=26.1
Q ss_pred CCCceeEEeeeCCCcccCccCHHHHHhhCCCc
Q psy3845 97 NVKVPVALFYSNNDWLAPGEDVDVLSRKLPNV 128 (167)
Q Consensus 97 ~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~ 128 (167)
..+.|+.+++|.+|.+++++..+.+.++|..+
T Consensus 166 ~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 166 GPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred CCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 34456789999999999999999888877653
No 93
>PLN02442 S-formylglutathione hydrolase
Probab=69.15 E-value=5.6 Score=32.89 Aligned_cols=52 Identities=8% Similarity=0.053 Sum_probs=32.6
Q ss_pred ccccCCCceeEEeeeCCCcccCcc-CHHHHHhhCCCc-eeeEEeeCCCCCccch
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAPGE-DVDVLSRKLPNV-VGKYKVPLKRFNHLDF 144 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~~~-Dv~~L~~~L~n~-~~~~~~~~~~~~HlDF 144 (167)
..+.++++|+.+++|+.|.+++.. ..+.+.+.+.+. .......+++-+|-=+
T Consensus 211 ~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 211 SKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred hhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 345567899999999999998863 234444443211 1123445678899533
No 94
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=64.24 E-value=7.8 Score=32.20 Aligned_cols=62 Identities=8% Similarity=0.107 Sum_probs=43.3
Q ss_pred cCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 96 SNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 96 ~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
..+.+||+++-|++|++++.+++....++..+.-..+.. +-+|+ +=....++|-..|.+.+.
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~f---dGgHF---fl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVF---DGGHF---FLNQQREEVLARLEQHLA 234 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEe---cCcce---ehhhhHHHHHHHHHHHhh
Confidence 568899999999999999999998777777654332322 44554 334555556667766664
No 95
>KOG4391|consensus
Probab=63.72 E-value=7 Score=32.58 Aligned_cols=51 Identities=18% Similarity=0.136 Sum_probs=41.1
Q ss_pred cCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhc
Q psy3845 96 SNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWA 147 (167)
Q Consensus 96 ~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~ 147 (167)
++-.+|+....|..|.|++|.....|.+.-|... +...++|+-.|-|-..+
T Consensus 218 ~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~-Krl~eFP~gtHNDT~i~ 268 (300)
T KOG4391|consen 218 GQCRMPFLFISGLKDELVPPVMMRQLYELCPSRT-KRLAEFPDGTHNDTWIC 268 (300)
T ss_pred ccccCceEEeecCccccCCcHHHHHHHHhCchhh-hhheeCCCCccCceEEe
Confidence 3445899999999999999999999998888743 34567899999996443
No 96
>PLN00021 chlorophyllase
Probab=63.31 E-value=15 Score=31.16 Aligned_cols=47 Identities=17% Similarity=0.282 Sum_probs=30.9
Q ss_pred CCCceeEEeeeCCCc-----c---cCccCH--HHHHhhCCCceeeEEeeCCCCCccchh
Q psy3845 97 NVKVPVALFYSNNDW-----L---APGEDV--DVLSRKLPNVVGKYKVPLKRFNHLDFM 145 (167)
Q Consensus 97 ~i~~Pv~l~~g~~D~-----L---~~~~Dv--~~L~~~L~n~~~~~~~~~~~~~HlDFi 145 (167)
++.+|+.++.++.|. + +.+..+ ..+.++.+.-+ .....++++|+||+
T Consensus 187 ~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~--~~~~~~~~gH~~~~ 243 (313)
T PLN00021 187 NLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPA--VHFVAKDYGHMDML 243 (313)
T ss_pred cCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCe--eeeeecCCCcceee
Confidence 477999988888663 2 234444 44666665422 34556899999994
No 97
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=63.10 E-value=6.2 Score=31.25 Aligned_cols=35 Identities=20% Similarity=0.367 Sum_probs=24.1
Q ss_pred ccccCCCceeEEeeeCCCcccCccCHHHHHhhCCC
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPN 127 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n 127 (167)
|.-..|++|+.-++|.+|.+++++..+.|.+...+
T Consensus 155 ~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~ 189 (212)
T PF03959_consen 155 YDEPKISIPTLHVIGENDPVVPPERSEALAEMFDP 189 (212)
T ss_dssp T--TT---EEEEEEETT-SSS-HHHHHHHHHHHHH
T ss_pred hccccCCCCeEEEEeCCCCCcchHHHHHHHHhccC
Confidence 34567899999999999999999888888887665
No 98
>PRK10115 protease 2; Provisional
Probab=60.30 E-value=14 Score=34.81 Aligned_cols=53 Identities=11% Similarity=-0.031 Sum_probs=38.4
Q ss_pred CccccccCCCce-eEEeeeCCCcccCccCHHHHHhhCCCc-ee---eEEeeCCCCCcc
Q psy3845 90 PPSYRLSNVKVP-VALFYSNNDWLAPGEDVDVLSRKLPNV-VG---KYKVPLKRFNHL 142 (167)
Q Consensus 90 PP~Y~l~~i~~P-v~l~~g~~D~L~~~~Dv~~L~~~L~n~-~~---~~~~~~~~~~Hl 142 (167)
-|-.++++++.| +.+..|.+|.-|++..-.++..+|... +. ......++-+|-
T Consensus 596 SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 596 SPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred CchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Confidence 467789999999 556699999999999988877777431 11 112223788997
No 99
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=59.90 E-value=4.9 Score=31.11 Aligned_cols=46 Identities=22% Similarity=0.235 Sum_probs=33.8
Q ss_pred cCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchh
Q psy3845 96 SNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFM 145 (167)
Q Consensus 96 ~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi 145 (167)
.....|..++.|+||..++.+..+.+.++|... .+..+.-+|+.--
T Consensus 111 ~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~a~----~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 111 DPLPFPSIVIASDNDPYVPFERAQRLAQRLGAE----LIILGGGGHFNAA 156 (171)
T ss_dssp CHHHCCEEEEEETTBSSS-HHHHHHHHHHHT-E----EEEETS-TTSSGG
T ss_pred cccCCCeEEEEcCCCCccCHHHHHHHHHHcCCC----eEECCCCCCcccc
Confidence 344577799999999999999999999999652 3445788887644
No 100
>COG0400 Predicted esterase [General function prediction only]
Probab=57.24 E-value=6.9 Score=31.51 Aligned_cols=58 Identities=14% Similarity=0.028 Sum_probs=37.7
Q ss_pred CceeEEeeeCCCcccCccCHHHHHhhCCCcee-eEEeeCCCCCccchhhcccchhHHHHHHHHHHhh
Q psy3845 99 KVPVALFYSNNDWLAPGEDVDVLSRKLPNVVG-KYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHK 164 (167)
Q Consensus 99 ~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~-~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~ 164 (167)
.+||.+.+|.+|.+++......|.+.|.+.-. +....++ -+| ....+..+.+.+++..
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH-------~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGH-------EIPPEELEAARSWLAN 204 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCC-------cCCHHHHHHHHHHHHh
Confidence 48999999999999999998888887754221 1111111 333 4555555666665543
No 101
>PF08257 Sulfakinin: Sulfakinin family; InterPro: IPR013259 The sulfakinin (SK) family of neuropeptides have only been identified in crustaceans and insects. For most species there is the potential for producing two sulfakinin peptides, one has a short sulfakinin sequence. The function of the sulfakinins is difficult to assess. For the Periplaneta americana (American cockroach), various forms of the endogenous sulfakinins have been shown to be active on the hindgut, and also on the heart. In Calliphora vomitoria (Blue blowfly) the peptides act as neurotransmitters or neuromodulators, linking the brain with all thoracic and abdominal ganglia. In adults of Penaeus monodon (Penoeid shrimp) they appear to be restricted to a few neurones in the brain with a neural pathway extending along to the ventral thoracic and abdominal ganglia [].
Probab=56.30 E-value=5.4 Score=16.34 Aligned_cols=8 Identities=25% Similarity=0.883 Sum_probs=6.0
Q ss_pred CCCCccch
Q psy3845 137 KRFNHLDF 144 (167)
Q Consensus 137 ~~~~HlDF 144 (167)
++|+|+-|
T Consensus 2 ~dyghmrf 9 (9)
T PF08257_consen 2 DDYGHMRF 9 (9)
T ss_pred CccccccC
Confidence 57888865
No 102
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=53.00 E-value=19 Score=31.37 Aligned_cols=100 Identities=14% Similarity=0.189 Sum_probs=71.2
Q ss_pred HHHHhhcCCCceeecccCCccCccccCCcCCccccccCCC-ceeEEeeeCCCcccCccCH---HHHHhhCCCceeeEEee
Q psy3845 60 ILYYLLVPDRTFQQYDLGWLGNWRKYGQLRPPSYRLSNVK-VPVALFYSNNDWLAPGEDV---DVLSRKLPNVVGKYKVP 135 (167)
Q Consensus 60 ~H~~Q~~~sg~F~~yDyG~~~N~~~Yg~~~PP~Y~l~~i~-~Pv~l~~g~~D~L~~~~Dv---~~L~~~L~n~~~~~~~~ 135 (167)
+-|.|-+. .-||+|-. +.+++.+=|.. -+.+.|+ +-..-.=|++|.++-.-.. ..|...+|.....+.+
T Consensus 305 EfYLqTid-~VFqq~~L-pkG~~vhrg~~----vdp~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~- 377 (415)
T COG4553 305 EFYLQTID-EVFQQHAL-PKGEMVHRGKP----VDPTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYM- 377 (415)
T ss_pred HHHHHHHH-HHHHHhcc-cCCceeecCCc----CChhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhc-
Confidence 35556553 34777665 35677777765 4456665 4455567999998866554 4466667765544544
Q ss_pred CCCCCccchhhcccchhHHHHHHHHHHhhhc
Q psy3845 136 LKRFNHLDFMWAIDVKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 136 ~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~~ 166 (167)
-++-+|....=|..-++.+++.|.++|.+|.
T Consensus 378 qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d 408 (415)
T COG4553 378 QPDVGHYGVFNGSRFREEIVPRIRDFIRRYD 408 (415)
T ss_pred CCCCCccceeccchHHHHHHHHHHHHHHHhC
Confidence 4899999999999999999999999999885
No 103
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=51.40 E-value=21 Score=29.11 Aligned_cols=54 Identities=7% Similarity=-0.011 Sum_probs=36.2
Q ss_pred CCceeEEeeeCCCcccCc-cCHHHHHhhCCCc-eeeEEeeCCCCCccchhhcccch
Q psy3845 98 VKVPVALFYSNNDWLAPG-EDVDVLSRKLPNV-VGKYKVPLKRFNHLDFMWAIDVK 151 (167)
Q Consensus 98 i~~Pv~l~~g~~D~L~~~-~Dv~~L~~~L~n~-~~~~~~~~~~~~HlDFi~~~~a~ 151 (167)
...|+.+.+|++|.+++. ...+.+.+.|... +.......++-+|-=+.|..-..
T Consensus 210 ~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~~~~~~ 265 (275)
T TIGR02821 210 RHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFIASFIA 265 (275)
T ss_pred cCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhHHHhHH
Confidence 467999999999999998 4655665555321 12234456788887766665443
No 104
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=50.67 E-value=9.7 Score=30.93 Aligned_cols=29 Identities=24% Similarity=0.274 Sum_probs=24.9
Q ss_pred ceeEEeeeCCCcccCccCHHHHHhhCCCc
Q psy3845 100 VPVALFYSNNDWLAPGEDVDVLSRKLPNV 128 (167)
Q Consensus 100 ~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~ 128 (167)
.|+.+|+|+.|..+.+...+.+.++..++
T Consensus 170 ~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 170 YPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred CCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 48999999999999999988888776543
No 105
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=48.27 E-value=37 Score=28.98 Aligned_cols=61 Identities=20% Similarity=0.266 Sum_probs=35.9
Q ss_pred ccccCCcCCccccc----cCCCceeEEeeeCCC-------cccCccCH--HHHHhhC-CCceeeEEeeCCCCCccchh
Q psy3845 82 WRKYGQLRPPSYRL----SNVKVPVALFYSNND-------WLAPGEDV--DVLSRKL-PNVVGKYKVPLKRFNHLDFM 145 (167)
Q Consensus 82 ~~~Yg~~~PP~Y~l----~~i~~Pv~l~~g~~D-------~L~~~~Dv--~~L~~~L-~n~~~~~~~~~~~~~HlDFi 145 (167)
..+++|+.|+.-.. =++.+||.++=++-- .=+.|++| +...++= +... +.+ ..+|+|||++
T Consensus 159 ~~k~~~t~P~iLty~p~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~p~~--hfV-~~dYGHmDmL 233 (307)
T PF07224_consen 159 TSKGKQTPPPILTYVPQSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKPPCA--HFV-AKDYGHMDML 233 (307)
T ss_pred CCCCCCCCCCeeecCCcccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcccce--eee-eccccccccc
Confidence 33467777776443 134589988655433 34566666 3355543 3322 333 4799999986
No 106
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=47.64 E-value=12 Score=28.69 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=28.1
Q ss_pred ceeEEeeeCCCcccCccCHHHHHhhCCC-ceeeEEeeCCCCCc
Q psy3845 100 VPVALFYSNNDWLAPGEDVDVLSRKLPN-VVGKYKVPLKRFNH 141 (167)
Q Consensus 100 ~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n-~~~~~~~~~~~~~H 141 (167)
.|+.+++|+.|.|.+ +...+.++|.. -+.+....+++-.|
T Consensus 167 Pp~~i~~g~~D~l~~--~~~~~~~~L~~~gv~v~~~~~~g~~H 207 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVD--DSLRFAEKLKKAGVDVELHVYPGMPH 207 (211)
T ss_dssp HEEEEEEETTSTTHH--HHHHHHHHHHHTT-EEEEEEETTEET
T ss_pred CCeeeeccccccchH--HHHHHHHHHHHCCCCEEEEEECCCeE
Confidence 699999999999974 56777777752 23344455677777
No 107
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=45.38 E-value=28 Score=29.89 Aligned_cols=46 Identities=20% Similarity=0.066 Sum_probs=38.4
Q ss_pred CCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccch
Q psy3845 97 NVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDF 144 (167)
Q Consensus 97 ~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDF 144 (167)
+|++|+.+--|--|..++|.-+--..+.|+..+... .++.++|-+.
T Consensus 257 RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~--iy~~~aHe~~ 302 (321)
T COG3458 257 RIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIE--IYPYFAHEGG 302 (321)
T ss_pred hhccceEEeecccCCCCCChhhHHHhhcccCCceEE--EeeccccccC
Confidence 489999999999999999999999999998765433 3568889763
No 108
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=44.49 E-value=16 Score=29.69 Aligned_cols=47 Identities=17% Similarity=0.082 Sum_probs=30.8
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhhCCCce-eeEEeeCCCCCcc
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVV-GKYKVPLKRFNHL 142 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~-~~~~~~~~~~~Hl 142 (167)
+++|++||++..|-.|.+.. .......+.|.+-. ...++-+-.|+|.
T Consensus 224 ~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw~H~ 271 (272)
T PF02129_consen 224 LDKIDVPVLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPWTHG 271 (272)
T ss_dssp HGG--SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESESTT
T ss_pred HhhCCCCEEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCCCCC
Confidence 58999999999999997776 66666666665433 2123334577775
No 109
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=43.45 E-value=14 Score=31.62 Aligned_cols=48 Identities=19% Similarity=0.272 Sum_probs=10.6
Q ss_pred ccCCCceeEEeeeCCCcccCc-cCHHHHHhhCCCceee-----EEeeCCCCCcc
Q psy3845 95 LSNVKVPVALFYSNNDWLAPG-EDVDVLSRKLPNVVGK-----YKVPLKRFNHL 142 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~-~Dv~~L~~~L~n~~~~-----~~~~~~~~~Hl 142 (167)
+..|+.|+.+.+|++|..+++ .|.+.|.++....... ...-+|.-+|.
T Consensus 228 fG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~ 281 (303)
T PF08538_consen 228 FGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHN 281 (303)
T ss_dssp GGG--S-EEEEEE--TT-------------------------------------
T ss_pred hccCCCceEEEecCCCceeccccccccccccccccccccccccccccccccccc
Confidence 556888999999999999866 3556677777654321 12234566663
No 110
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=43.32 E-value=38 Score=27.89 Aligned_cols=43 Identities=21% Similarity=0.297 Sum_probs=33.1
Q ss_pred CceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCc
Q psy3845 99 KVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNH 141 (167)
Q Consensus 99 ~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~H 141 (167)
...+.+|||.+|.=|+.+--+.+.++.|+......+..++..|
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~~~i~H 263 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDEEGIPH 263 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEecCCCCC
Confidence 5689999999999999988899999999532223444466666
No 111
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=41.93 E-value=33 Score=29.01 Aligned_cols=28 Identities=14% Similarity=0.145 Sum_probs=25.1
Q ss_pred CceeEEeeeCCCcccCccCHHHHHhhCC
Q psy3845 99 KVPVALFYSNNDWLAPGEDVDVLSRKLP 126 (167)
Q Consensus 99 ~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~ 126 (167)
.++|.+|.|..|.+++.-..+...++|.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~ 260 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLN 260 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcC
Confidence 3799999999999999999988888875
No 112
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=41.36 E-value=72 Score=25.38 Aligned_cols=109 Identities=12% Similarity=0.047 Sum_probs=66.8
Q ss_pred hhccCCCCccccchhHHHHHhhcCC---Cce--eecccCCccCcccc-CCcCCccccccCCCceeEEeeeCCCcccCccC
Q psy3845 44 VLKTKPPTKEEEPNLFILYYLLVPD---RTF--QQYDLGWLGNWRKY-GQLRPPSYRLSNVKVPVALFYSNNDWLAPGED 117 (167)
Q Consensus 44 ~~~~~p~gtS~~~k~~~H~~Q~~~s---g~F--~~yDyG~~~N~~~Y-g~~~PP~Y~l~~i~~Pv~l~~g~~D~L~~~~D 117 (167)
+.+|...+ -.+.||+..... |-| ..+|-+..+-...+ ++..| |+.....-|.+++.|+||..++.+-
T Consensus 63 lVAHSLGc-----~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf~~--~p~~~lpfps~vvaSrnDp~~~~~~ 135 (181)
T COG3545 63 LVAHSLGC-----ATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTFDP--IPREPLPFPSVVVASRNDPYVSYEH 135 (181)
T ss_pred EEEecccH-----HHHHHHHHhhhhccceEEEecCCCccccccchhhccccCC--CccccCCCceeEEEecCCCCCCHHH
Confidence 55664432 566788866543 222 34554432222222 22322 4555666899999999999999999
Q ss_pred HHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 118 VDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 118 v~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
.+.+.+..++.. +...+.+|+.-=-|-..=...|..+-+++.
T Consensus 136 a~~~a~~wgs~l----v~~g~~GHiN~~sG~g~wpeg~~~l~~~~s 177 (181)
T COG3545 136 AEDLANAWGSAL----VDVGEGGHINAESGFGPWPEGYALLAQLLS 177 (181)
T ss_pred HHHHHHhccHhh----eecccccccchhhcCCCcHHHHHHHHHHhh
Confidence 999999998732 334577777655555555555554444443
No 113
>KOG2551|consensus
Probab=41.19 E-value=37 Score=28.00 Aligned_cols=64 Identities=11% Similarity=0.194 Sum_probs=44.6
Q ss_pred ccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhh
Q psy3845 93 YRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKY 165 (167)
Q Consensus 93 Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~ 165 (167)
+..+.|++|..=++|+.|.+++....+.|++..++-... .-..+|+ |=+.+ . .=++|.+.|.+.
T Consensus 157 ~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl----~HpggH~--VP~~~--~-~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 157 AYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVL----EHPGGHI--VPNKA--K-YKEKIADFIQSF 220 (230)
T ss_pred hhccCCCCCeeEEecccceeecchHHHHHHHhcCCCeEE----ecCCCcc--CCCch--H-HHHHHHHHHHHH
Confidence 345678999999999999999999999999998875321 1256664 22222 2 225677776654
No 114
>PF08406 CbbQ_C: CbbQ/NirQ/NorQ C-terminal ; InterPro: IPR013615 This domain is found at the C terminus of proteins of the CbbQ/NirQ/NorQ family of proteins which play a role in the post-translational activation of Rubisco []. It is also found in the Thauera aromaticaTutH protein which is similar to the CbbQ/NirQ/NorQ family [], as well as in putative chaperones. The ATPase domain associated with various cellular activities (AAA) IPR011704 from INTERPRO is found in the same bacterial and archaeal proteins as the domain described here.
Probab=36.87 E-value=21 Score=24.76 Aligned_cols=21 Identities=19% Similarity=0.105 Sum_probs=18.4
Q ss_pred cCCCCccccchhHHHHHhhcCCC
Q psy3845 47 TKPPTKEEEPNLFILYYLLVPDR 69 (167)
Q Consensus 47 ~~p~gtS~~~k~~~H~~Q~~~sg 69 (167)
-.+.+.|+ +.+.||+.++..|
T Consensus 33 ~L~e~~ST--R~Li~~A~Li~~G 53 (86)
T PF08406_consen 33 GLEETVST--RLLIYAARLIAAG 53 (86)
T ss_pred CCCCCCcH--HHHHHHHHHHHcC
Confidence 36889999 9999999999865
No 115
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=34.38 E-value=30 Score=30.97 Aligned_cols=31 Identities=16% Similarity=0.287 Sum_probs=22.7
Q ss_pred cCCCceeEEeeeCCCcccCccCHHHHHhhCC
Q psy3845 96 SNVKVPVALFYSNNDWLAPGEDVDVLSRKLP 126 (167)
Q Consensus 96 ~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~ 126 (167)
.+.++|+...+|++|.+++.+|.+.+...=.
T Consensus 349 rr~~~plL~i~~~~D~v~P~eD~~lia~~s~ 379 (411)
T PF06500_consen 349 RRCPTPLLAINGEDDPVSPIEDSRLIAESST 379 (411)
T ss_dssp S-BSS-EEEEEETT-SSS-HHHHHHHHHTBT
T ss_pred CCCCcceEEeecCCCCCCCHHHHHHHHhcCC
Confidence 4567999999999999999999988776533
No 116
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=33.46 E-value=77 Score=27.77 Aligned_cols=57 Identities=12% Similarity=0.156 Sum_probs=41.8
Q ss_pred ceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHH-HHHHHHHh
Q psy3845 100 VPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLY-DDVVRVLH 163 (167)
Q Consensus 100 ~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy-~~ii~~l~ 163 (167)
-.+++..+++|..++.+.|..|.+.-|+. +...+ +. +|.+-..-... +| +-|++.++
T Consensus 290 ~~ii~V~A~~DaYVPr~~v~~Lq~~WPGs-EvR~l--~g-GHVsA~L~~q~---~fR~AI~Daf~ 347 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRHGVLSLQEIWPGS-EVRYL--PG-GHVSAYLLHQE---AFRQAIYDAFE 347 (348)
T ss_pred CcEEEEEecCceEechhhcchHHHhCCCC-eEEEe--cC-CcEEEeeechH---HHHHHHHHHhh
Confidence 35889999999999999999999999984 33444 34 99998887653 33 34555443
No 117
>COG4099 Predicted peptidase [General function prediction only]
Probab=32.68 E-value=18 Score=31.46 Aligned_cols=67 Identities=22% Similarity=0.355 Sum_probs=41.9
Q ss_pred ccccCCC-ceeEEeeeCCCcccCccCHHHHHhhCCCcee--------eEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 93 YRLSNVK-VPVALFYSNNDWLAPGEDVDVLSRKLPNVVG--------KYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 93 Y~l~~i~-~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~--------~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
|-++.++ .|+.+|+|.+|..++.++-..+..+|..+.. ......+.+.|-.-=|+.--. ++++++|-
T Consensus 308 ~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~~g~~~~eG~d~~g~w~atyn~----~eaieWLl 383 (387)
T COG4099 308 YLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFLEGTTVLEGVDHSGVWWATYND----AEAIEWLL 383 (387)
T ss_pred hhhhhhccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhhhccccccccCCCCcceeecCC----HHHHHHHH
Confidence 5556654 8999999999999999987666666654332 111233556666654443332 45666543
No 118
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=31.45 E-value=1e+02 Score=25.42 Aligned_cols=65 Identities=15% Similarity=0.080 Sum_probs=41.2
Q ss_pred ccCCCceeEEeeeCCCcccCccCHHHHHhhCCC-ceeeEEeeCCCCCccchhhcc-cchhHHHHHHHHHHh
Q psy3845 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPN-VVGKYKVPLKRFNHLDFMWAI-DVKKLLYDDVVRVLH 163 (167)
Q Consensus 95 l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n-~~~~~~~~~~~~~HlDFi~~~-~a~~~vy~~ii~~l~ 163 (167)
++. -.|+.+..|+.|.|.+ |.+.+.++|.. -+.......+.-.| +|.-.. .....-+..|.+.++
T Consensus 242 ~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H-~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 242 LSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIH-GFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred ccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcce-eccccCcHHHHHHHHHHHHHHH
Confidence 444 5789999999999999 66777777642 23334556678888 662222 222223556666654
No 119
>KOG2100|consensus
Probab=29.55 E-value=93 Score=29.90 Aligned_cols=72 Identities=24% Similarity=0.167 Sum_probs=54.5
Q ss_pred CccccccCCCcee-EEeeeCCCcccCccCHHHHHhhCCC-ceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHh
Q psy3845 90 PPSYRLSNVKVPV-ALFYSNNDWLAPGEDVDVLSRKLPN-VVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLH 163 (167)
Q Consensus 90 PP~Y~l~~i~~Pv-~l~~g~~D~L~~~~Dv~~L~~~L~n-~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~ 163 (167)
-|.+.+++++.|. .|++|..|.-+..+--.++.+.|.+ -+....+.+|+=+|-.+ ..++...+|.++...++
T Consensus 672 ~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is--~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 672 SVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGIS--YVEVISHLYEKLDRFLR 745 (755)
T ss_pred cccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccc--cccchHHHHHHHHHHHH
Confidence 3577888899887 8999999999998888888877753 22356677888888643 34555668888888776
No 120
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=27.88 E-value=1.8e+02 Score=26.25 Aligned_cols=70 Identities=14% Similarity=0.024 Sum_probs=48.5
Q ss_pred cccCCC---ceeEEeeeCCCcccCccCHHH----HHhhCCC----cee-eEEeeCCCCCccchhhcccchhHHHHHHHHH
Q psy3845 94 RLSNVK---VPVALFYSNNDWLAPGEDVDV----LSRKLPN----VVG-KYKVPLKRFNHLDFMWAIDVKKLLYDDVVRV 161 (167)
Q Consensus 94 ~l~~i~---~Pv~l~~g~~D~L~~~~Dv~~----L~~~L~n----~~~-~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~ 161 (167)
||+... =.+++|+|..|.++++.+... +.+.++. +.. .+....|..+|-.---|.+..+ +...+++.
T Consensus 345 DLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d-~l~aL~~W 423 (474)
T PF07519_consen 345 DLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFD-ALTALVDW 423 (474)
T ss_pred CHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCC-HHHHHHHH
Confidence 455443 579999999999999999754 4444543 222 3445679999998776666554 55777777
Q ss_pred Hhh
Q psy3845 162 LHK 164 (167)
Q Consensus 162 l~~ 164 (167)
.++
T Consensus 424 VE~ 426 (474)
T PF07519_consen 424 VEN 426 (474)
T ss_pred HhC
Confidence 764
No 121
>PLN02209 serine carboxypeptidase
Probab=25.36 E-value=63 Score=28.90 Aligned_cols=28 Identities=14% Similarity=0.186 Sum_probs=25.2
Q ss_pred CceeEEeeeCCCcccCccCHHHHHhhCC
Q psy3845 99 KVPVALFYSNNDWLAPGEDVDVLSRKLP 126 (167)
Q Consensus 99 ~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~ 126 (167)
.++|.+|.|+.|.+++.-..+...+.|.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~ 378 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLN 378 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcC
Confidence 3799999999999999999988888775
No 122
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=24.99 E-value=42 Score=26.80 Aligned_cols=27 Identities=19% Similarity=0.313 Sum_probs=23.5
Q ss_pred cccCCCceeEEeeeCCCcccCccCHHH
Q psy3845 94 RLSNVKVPVALFYSNNDWLAPGEDVDV 120 (167)
Q Consensus 94 ~l~~i~~Pv~l~~g~~D~L~~~~Dv~~ 120 (167)
.|.-+++|+.++.|..|.+.+.+.|..
T Consensus 137 HL~gl~tPtli~qGtrD~fGtr~~Va~ 163 (213)
T COG3571 137 HLTGLKTPTLITQGTRDEFGTRDEVAG 163 (213)
T ss_pred hccCCCCCeEEeecccccccCHHHHHh
Confidence 477789999999999999999887743
No 123
>KOG3253|consensus
Probab=24.79 E-value=86 Score=29.88 Aligned_cols=48 Identities=19% Similarity=0.278 Sum_probs=38.2
Q ss_pred cccccCCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCc
Q psy3845 92 SYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNH 141 (167)
Q Consensus 92 ~Y~l~~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~H 141 (167)
.=+|-.++.||.+.-|.+|..+.++-.+.+.+++....+.+.+ ..-+|
T Consensus 297 DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI--~~adh 344 (784)
T KOG3253|consen 297 DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVI--GGADH 344 (784)
T ss_pred chhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEe--cCCCc
Confidence 3356678899999999999999999999999998876654433 45555
No 124
>PRK00819 RNA 2'-phosphotransferase; Reviewed
Probab=24.60 E-value=84 Score=24.75 Aligned_cols=56 Identities=11% Similarity=0.024 Sum_probs=40.0
Q ss_pred hHHHHHhhcCCCceeecccCCccCccccCCcCCccccccCCCceeEEeeeCCCccc
Q psy3845 58 LFILYYLLVPDRTFQQYDLGWLGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLA 113 (167)
Q Consensus 58 ~~~H~~Q~~~sg~F~~yDyG~~~N~~~Yg~~~PP~Y~l~~i~~Pv~l~~g~~D~L~ 113 (167)
+..|..+++.++.=++|..-...=...||-+-+...++...+.|-.||||+.-...
T Consensus 51 t~~~l~~vV~~d~K~Rf~l~~~~IRA~qGHSi~v~~~~~~~~~P~~lyHGT~~~~~ 106 (179)
T PRK00819 51 TRELLEAVVESDDKGRFEISGDRIRARQGHSVDVDLDLEEDTPPAVLYHGTSSEEL 106 (179)
T ss_pred CHHHHHHHHHcCCCcceEecCceEEeccCcCCccccCCccCCCCceeEeCCCHHHH
Confidence 56677788888777777763222345678777777778777889999999876544
No 125
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=24.09 E-value=2.5e+02 Score=20.39 Aligned_cols=26 Identities=19% Similarity=0.112 Sum_probs=21.6
Q ss_pred eeEEeeeCCCcccCccCHHHHHhhCCC
Q psy3845 101 PVALFYSNNDWLAPGEDVDVLSRKLPN 127 (167)
Q Consensus 101 Pv~l~~g~~D~L~~~~Dv~~L~~~L~n 127 (167)
-|.+..|.||. ...++++.+.++++.
T Consensus 53 ~vvi~lGtNd~-~~~~nl~~ii~~~~~ 78 (150)
T cd01840 53 TVVIGLGTNGP-FTKDQLDELLDALGP 78 (150)
T ss_pred eEEEEecCCCC-CCHHHHHHHHHHcCC
Confidence 37899999998 467888999998874
No 126
>KOG2565|consensus
Probab=24.02 E-value=1.1e+02 Score=27.50 Aligned_cols=114 Identities=21% Similarity=0.220 Sum_probs=71.4
Q ss_pred hhccCCCCccccchhHHHHHhhcCCCceeecccCC---------ccCcccc---CCcCC--ccc-------------ccc
Q psy3845 44 VLKTKPPTKEEEPNLFILYYLLVPDRTFQQYDLGW---------LGNWRKY---GQLRP--PSY-------------RLS 96 (167)
Q Consensus 44 ~~~~~p~gtS~~~k~~~H~~Q~~~sg~F~~yDyG~---------~~N~~~Y---g~~~P--P~Y-------------~l~ 96 (167)
-+-..|.|... --+.-|.|.-+.+-=+-.|-|. ..|+..| |+.+- -.| +=.
T Consensus 324 Al~dsPvGlAa--YIleKfstwTn~~~r~l~dggL~krFt~D~lltnvmiYwlT~si~ss~r~y~e~~~~~~r~~~~~r~ 401 (469)
T KOG2565|consen 324 ALNDSPVGLAA--YILEKFSTWTNTEFRSLPDGGLNKRFTMDELLTNVMIYWLTNSITSSQRFYDESFNQRQRDLALDRV 401 (469)
T ss_pred hhccCchHHHH--HHHHHHhhccChhhhhCCCCchheeecHHHHhhhhhhheecCcchhhHHHHHHHHhHHHHHHHhhcc
Confidence 44456777776 6677777765442112223232 2566666 22111 011 223
Q ss_pred CCCceeEEeeeCCCcccCccCHHHHHhhCCCceeeEEeeCCCCCccchhhcccchhHHHHHHHHHHhhhc
Q psy3845 97 NVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVLHKYN 166 (167)
Q Consensus 97 ~i~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~n~~~~~~~~~~~~~HlDFi~~~~a~~~vy~~ii~~l~~~~ 166 (167)
.+.+|+..-++..|..-.++ ..|..+-||++. ....++-+|+- |-.+.+.+++++++++++-+
T Consensus 402 ~v~vPtg~a~f~~el~~~~~--~~lrdky~nL~~--~s~~~~GGhFa---alE~p~~La~D~~~FV~~~~ 464 (469)
T KOG2565|consen 402 QVRVPTGCARFKFELWHTSD--DVLRDKYPNLTH--SSYHPKGGHFA---ALEDPKKLAQDFFSFVEKLN 464 (469)
T ss_pred ccccchhhhccccchhhCcH--HHHhhhccccee--eEeccCCcchh---hhhCcHHHHHHHHHHHHHHH
Confidence 36689999999999888666 457788999874 33456777764 66788899999999887654
No 127
>COG3160 Rsd Regulator of sigma D [Transcription]
Probab=23.57 E-value=35 Score=26.25 Aligned_cols=73 Identities=14% Similarity=0.097 Sum_probs=45.7
Q ss_pred hhcchh-----hhccCCCCccccchhHHHHHhh----cCCCceeeccc--------CCccCccccCCcCCccccccCCCc
Q psy3845 38 RQCMET-----VLKTKPPTKEEEPNLFILYYLL----VPDRTFQQYDL--------GWLGNWRKYGQLRPPSYRLSNVKV 100 (167)
Q Consensus 38 ~~C~~~-----~~~~~p~gtS~~~k~~~H~~Q~----~~sg~F~~yDy--------G~~~N~~~Yg~~~PP~Y~l~~i~~ 100 (167)
..|.-+ --+|+|. +. |.+.||+|. +.+|.|.-||- |. +-+..-.+.-| .|..+|-
T Consensus 32 ayc~l~gikp~ke~~~pl--na--kaL~~FCq~LvDYlSaGHF~iYe~i~~k~~~~g~-~~l~la~kI~p---~l~a~Tq 103 (162)
T COG3160 32 AYCNLVGIKPGKESYMPL--NA--KALDDFCQSLVDYLSAGHFSIYERILHKLEGNGD-RQLALAAKIWP---QLEANTQ 103 (162)
T ss_pred HHHHHhccCccccccCCC--CH--HHHHHHHHHHHHHHhccchHHHHHHHHHHhccCc-HHHHHHHHHHH---HHHhhHH
Confidence 667521 3456676 77 999999998 67899999982 21 11111111111 2667778
Q ss_pred eeEEeeeCCCcccCccCH
Q psy3845 101 PVALFYSNNDWLAPGEDV 118 (167)
Q Consensus 101 Pv~l~~g~~D~L~~~~Dv 118 (167)
|+.-|+-..+..+...|-
T Consensus 104 ~imnfnD~~~n~~~d~d~ 121 (162)
T COG3160 104 QIMNFNDSSLNTAIDHDN 121 (162)
T ss_pred HHHhhcchhhccccCchH
Confidence 888888777766666653
No 128
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=23.19 E-value=72 Score=28.62 Aligned_cols=28 Identities=14% Similarity=0.177 Sum_probs=25.2
Q ss_pred CceeEEeeeCCCcccCccCHHHHHhhCC
Q psy3845 99 KVPVALFYSNNDWLAPGEDVDVLSRKLP 126 (167)
Q Consensus 99 ~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~ 126 (167)
.++|.+|.|+.|.+++....++..+.|+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~ 391 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQ 391 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCC
Confidence 4799999999999999999988888775
No 129
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=21.46 E-value=83 Score=25.59 Aligned_cols=82 Identities=11% Similarity=0.107 Sum_probs=47.3
Q ss_pred hhHHHHHhhcCCC----ceeecccCCc--cCccc-------cCCcCCc--cccccC---CCceeEEeeeCCCcccCccCH
Q psy3845 57 NLFILYYLLVPDR----TFQQYDLGWL--GNWRK-------YGQLRPP--SYRLSN---VKVPVALFYSNNDWLAPGEDV 118 (167)
Q Consensus 57 k~~~H~~Q~~~sg----~F~~yDyG~~--~N~~~-------Yg~~~PP--~Y~l~~---i~~Pv~l~~g~~D~L~~~~Dv 118 (167)
+...-|.|--.-+ -+.-|+||.. .|+.. +=+..|| .|+.+- ...|+.+.+|+.|..++..++
T Consensus 89 ~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~dfs~l~P~P~~~lvi~g~~Ddvv~l~~~ 168 (210)
T COG2945 89 AAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYDFSFLAPCPSPGLVIQGDADDVVDLVAV 168 (210)
T ss_pred HHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchhhhhccCCCCCceeEecChhhhhcHHHH
Confidence 4556666664432 2566888863 33322 2233333 345444 457899999999988877776
Q ss_pred HHHHhhCCCceeeEEeeCCCCCcc
Q psy3845 119 DVLSRKLPNVVGKYKVPLKRFNHL 142 (167)
Q Consensus 119 ~~L~~~L~n~~~~~~~~~~~~~Hl 142 (167)
-+..+..+- ..+.+++-+|+
T Consensus 169 l~~~~~~~~----~~i~i~~a~HF 188 (210)
T COG2945 169 LKWQESIKI----TVITIPGADHF 188 (210)
T ss_pred HHhhcCCCC----ceEEecCCCce
Confidence 665554221 12334666664
No 130
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=21.45 E-value=86 Score=28.01 Aligned_cols=28 Identities=14% Similarity=0.145 Sum_probs=25.1
Q ss_pred CceeEEeeeCCCcccCccCHHHHHhhCC
Q psy3845 99 KVPVALFYSNNDWLAPGEDVDVLSRKLP 126 (167)
Q Consensus 99 ~~Pv~l~~g~~D~L~~~~Dv~~L~~~L~ 126 (167)
.++|.+|.|+.|.+++.-..+...+.|.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~ 374 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLN 374 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCC
Confidence 4799999999999999999988888775
Done!