RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3845
(167 letters)
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris)
[TaxId: 9615]}
Length = 377
Score = 83.6 bits (205), Expect = 3e-20
Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 62 YYLLVPDRTFQQYDLGW-LGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDV 120
+ V FQ +D G + N Y Q PP Y L+++ VP+A++ ND LA DVD+
Sbjct: 275 WSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDL 334
Query: 121 LSRKLPNVVGKYKVPLKRFNHLDFMWAIDVKKLLYDDVVRVL 162
L KLPN++ K+P +NHLDF+WA+D + +Y+++V ++
Sbjct: 335 LLSKLPNLIYHRKIP--PYNHLDFIWAMDAPQAVYNEIVSMM 374
>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC
{Janthinobacterium sp. J3 [TaxId: 213804]}
Length = 268
Score = 30.2 bits (66), Expect = 0.088
Identities = 11/67 (16%), Positives = 23/67 (34%)
Query: 62 YYLLVPDRTFQQYDLGWLGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVL 121
Y D ++ + + R+ G L + V+VP + +D + P E
Sbjct: 171 RYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKF 230
Query: 122 SRKLPNV 128
+ +
Sbjct: 231 LDLIDDS 237
>d2rhwa1 c.69.1.10 (A:4-286)
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
(BPHD) {Burkholderia xenovorans [TaxId: 36873]}
Length = 283
Score = 30.2 bits (66), Expect = 0.097
Identities = 8/90 (8%), Positives = 26/90 (28%)
Query: 39 QCMETVLKTKPPTKEEEPNLFILYYLLVPDRTFQQYDLGWLGNWRKYGQLRPPSYRLSNV 98
+ ++ +L+ + + R + + + + RL +
Sbjct: 163 ETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEI 222
Query: 99 KVPVALFYSNNDWLAPGEDVDVLSRKLPNV 128
K + + +D P + L + +
Sbjct: 223 KAKTFITWGRDDRFVPLDHGLKLLWNIDDA 252
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio
harveyi [TaxId: 669]}
Length = 302
Score = 29.9 bits (66), Expect = 0.13
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Query: 84 KYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNVVGKYKVPLKRFNHLD 143
+ L +++N VP+ F +NND E+V + + L +H D
Sbjct: 182 HWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGH-CKLYSLLGSSH-D 239
Query: 144 FMWAIDVKKLLYDDVV 159
+ V + Y V
Sbjct: 240 LGENLVVLRNFYQSVT 255
>d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens
[TaxId: 615]}
Length = 313
Score = 27.9 bits (60), Expect = 0.68
Identities = 4/51 (7%), Positives = 13/51 (25%)
Query: 78 WLGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNV 128
+ + +P + + D ++ L++ P
Sbjct: 233 FTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEA 283
>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp.
[TaxId: 1831]}
Length = 291
Score = 27.5 bits (59), Expect = 0.79
Identities = 11/51 (21%), Positives = 15/51 (29%)
Query: 78 WLGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNV 128
+ L VP LF+ L P + L+ LPN
Sbjct: 209 AGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNC 259
>d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 322
Score = 27.5 bits (59), Expect = 0.83
Identities = 3/51 (5%), Positives = 15/51 (29%)
Query: 78 WLGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNV 128
+ + +P + + D++ + + +P++
Sbjct: 238 NWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHL 288
>d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase
{Leptospira interrogans [TaxId: 173]}
Length = 362
Score = 27.0 bits (59), Expect = 1.3
Identities = 11/59 (18%), Positives = 17/59 (28%), Gaps = 9/59 (15%)
Query: 69 RTFQQYDLGWLGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPN 127
+ Y LG LSN + ++DWL P + + L
Sbjct: 275 KALDHYSLGKGKELTA---------ALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEA 324
>d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C
acetyltransferase CefG {Acremonium chrysogenum [TaxId:
5044]}
Length = 376
Score = 27.1 bits (59), Expect = 1.3
Identities = 7/34 (20%), Positives = 16/34 (47%)
Query: 95 LSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPNV 128
L+ + P + + +D L ++ + R +PN
Sbjct: 312 LAMITQPALIICARSDGLYSFDEHVEMGRSIPNS 345
>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas
campestris, pv. citri [TaxId: 339]}
Length = 313
Score = 26.7 bits (57), Expect = 1.3
Identities = 12/108 (11%), Positives = 29/108 (26%), Gaps = 7/108 (6%)
Query: 20 TISDPLASIRQSTSINGGRQCMETVLKTKPPTKEEEPNLFILYYLLVPDRTFQQYDLGWL 79
T D + + + + + + E F L + + + F +
Sbjct: 183 TSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEV 242
Query: 80 GNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLPN 127
+ R +P + + D + P + L + P
Sbjct: 243 EDQLLRDAHR-------IADIPGVIVHGRYDVVCPLQSAWDLHKAWPK 283
>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 71
Score = 24.4 bits (53), Expect = 2.9
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 81 NWRKYGQ 87
WRKYGQ
Sbjct: 15 RWRKYGQ 21
>d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase
PepX, middle domain {Lactococcus lactis [TaxId: 1358]}
Length = 405
Score = 25.3 bits (54), Expect = 4.0
Identities = 11/68 (16%), Positives = 19/68 (27%)
Query: 67 PDRTFQQYDLGWLGNWRKYGQLRPPSYRLSNVKVPVALFYSNNDWLAPGEDVDVLSRKLP 126
G++ ++ R VK V + + DW E + LP
Sbjct: 280 RLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALP 339
Query: 127 NVVGKYKV 134
K+
Sbjct: 340 EGHAKHAF 347
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.141 0.441
Gapped
Lambda K H
0.267 0.0490 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 665,228
Number of extensions: 29898
Number of successful extensions: 62
Number of sequences better than 10.0: 1
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 15
Length of query: 167
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 88
Effective length of database: 1,322,926
Effective search space: 116417488
Effective search space used: 116417488
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.2 bits)