Query psy3847
Match_columns 664
No_of_seqs 388 out of 1623
Neff 6.9
Searched_HMMs 46136
Date Fri Aug 16 18:56:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3847.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3847hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd06431 GT8_LARGE_C LARGE cata 100.0 2.8E-56 6.2E-61 465.2 25.8 279 15-391 1-279 (280)
2 cd06430 GT8_like_2 GT8_like_2 100.0 9E-51 2E-55 422.7 22.8 285 15-417 1-303 (304)
3 PF13896 Glyco_transf_49: Glyc 100.0 1.5E-50 3.3E-55 429.5 18.5 184 478-664 1-257 (317)
4 PRK15171 lipopolysaccharide 1, 100.0 2.2E-42 4.7E-47 369.8 20.1 261 12-384 23-290 (334)
5 cd00505 Glyco_transf_8 Members 100.0 5.3E-41 1.2E-45 345.4 22.4 245 15-365 1-246 (246)
6 cd06429 GT8_like_1 GT8_like_1 100.0 8.8E-40 1.9E-44 336.8 20.2 251 15-380 1-256 (257)
7 PLN02718 Probable galacturonos 100.0 6E-37 1.3E-41 337.7 18.2 273 11-388 310-597 (603)
8 cd04194 GT8_A4GalT_like A4GalT 100.0 3.9E-36 8.4E-41 309.3 18.0 239 15-364 1-247 (248)
9 PLN02742 Probable galacturonos 100.0 7.6E-36 1.6E-40 325.1 20.0 294 11-388 224-529 (534)
10 PLN02523 galacturonosyltransfe 100.0 4.9E-35 1.1E-39 319.0 19.7 293 11-388 245-553 (559)
11 COG1442 RfaJ Lipopolysaccharid 100.0 1.1E-34 2.3E-39 305.7 17.9 248 13-373 1-253 (325)
12 PLN02769 Probable galacturonos 100.0 1.7E-34 3.7E-39 319.6 19.7 294 11-388 327-624 (629)
13 PLN02659 Probable galacturonos 100.0 1.4E-34 3E-39 314.6 17.9 303 11-388 204-527 (534)
14 cd06432 GT8_HUGT1_C_like The C 100.0 1.2E-34 2.6E-39 298.0 16.1 227 15-359 1-240 (248)
15 PLN02870 Probable galacturonos 100.0 1.3E-34 2.7E-39 314.9 16.4 307 10-388 202-526 (533)
16 PLN02867 Probable galacturonos 100.0 3E-34 6.5E-39 313.4 18.7 305 11-388 208-529 (535)
17 PLN02829 Probable galacturonos 100.0 7.2E-34 1.6E-38 312.4 16.9 293 12-388 329-633 (639)
18 PLN02910 polygalacturonate 4-a 100.0 2.5E-32 5.4E-37 299.7 15.8 296 11-388 342-651 (657)
19 PF01501 Glyco_transf_8: Glyco 100.0 1.5E-31 3.3E-36 272.5 16.3 169 187-366 78-249 (250)
20 KOG3765|consensus 100.0 7.3E-32 1.6E-36 289.9 12.8 286 241-664 5-323 (386)
21 cd02537 GT8_Glycogenin Glycoge 99.9 9.4E-25 2E-29 224.1 18.1 141 193-367 76-216 (240)
22 PLN00176 galactinol synthase 99.9 2.5E-23 5.4E-28 220.4 22.1 151 195-365 101-268 (333)
23 cd06914 GT8_GNT1 GNT1 is a fun 99.8 5.5E-18 1.2E-22 176.0 16.5 141 195-367 80-242 (278)
24 cd06431 GT8_LARGE_C LARGE cata 99.6 1.7E-15 3.7E-20 158.7 8.5 135 13-178 29-163 (280)
25 KOG1879|consensus 99.4 3.5E-13 7.5E-18 157.2 10.5 241 7-366 1174-1426(1470)
26 PRK15171 lipopolysaccharide 1, 99.3 9.2E-12 2E-16 133.9 9.4 131 13-179 54-185 (334)
27 cd06430 GT8_like_2 GT8_like_2 99.2 4E-11 8.6E-16 126.0 8.7 132 12-180 27-164 (304)
28 cd06429 GT8_like_1 GT8_like_1 99.1 2.2E-10 4.8E-15 118.7 7.0 111 13-146 28-146 (257)
29 cd00505 Glyco_transf_8 Members 99.0 1.4E-09 3E-14 112.2 8.2 106 14-154 30-135 (246)
30 PLN02523 galacturonosyltransfe 98.9 3.7E-09 8E-14 117.1 8.3 57 90-150 356-412 (559)
31 cd06432 GT8_HUGT1_C_like The C 98.8 6.9E-09 1.5E-13 107.2 7.1 101 13-148 29-129 (248)
32 PLN02870 Probable galacturonos 98.8 3.8E-09 8.3E-14 116.6 3.5 56 89-147 321-376 (533)
33 PLN02659 Probable galacturonos 98.7 3E-09 6.5E-14 117.4 2.2 57 89-149 322-378 (534)
34 PLN02742 Probable galacturonos 98.7 4.2E-09 9.1E-14 116.5 3.2 58 89-150 331-388 (534)
35 PLN02718 Probable galacturonos 98.7 1.7E-08 3.7E-13 113.2 7.1 55 92-150 399-453 (603)
36 PLN02867 Probable galacturonos 98.7 3.8E-09 8.3E-14 117.0 1.9 57 90-149 324-380 (535)
37 PLN02829 Probable galacturonos 98.7 6.3E-09 1.4E-13 116.4 2.6 55 89-146 435-489 (639)
38 PLN02769 Probable galacturonos 98.7 6.4E-09 1.4E-13 117.0 2.1 56 90-149 431-486 (629)
39 cd04194 GT8_A4GalT_like A4GalT 98.6 6.6E-08 1.4E-12 99.6 8.4 104 13-151 29-132 (248)
40 PLN02910 polygalacturonate 4-a 98.6 2.1E-08 4.6E-13 112.1 2.8 56 90-149 454-509 (657)
41 COG1442 RfaJ Lipopolysaccharid 98.4 8.2E-07 1.8E-11 94.7 8.6 109 14-156 32-140 (325)
42 PF01501 Glyco_transf_8: Glyco 98.0 8.6E-06 1.9E-10 82.8 6.4 129 16-149 1-133 (250)
43 COG5597 Alpha-N-acetylglucosam 97.8 1.4E-05 3.1E-10 82.4 3.9 151 189-366 150-339 (368)
44 PF03407 Nucleotid_trans: Nucl 97.3 0.0016 3.5E-08 65.4 10.5 127 211-359 68-202 (212)
45 PF10111 Glyco_tranf_2_2: Glyc 97.1 0.0028 6.1E-08 66.7 10.4 61 543-606 71-131 (281)
46 KOG3765|consensus 96.7 0.0014 3E-08 71.8 3.7 66 476-542 62-134 (386)
47 cd02537 GT8_Glycogenin Glycoge 96.4 0.0017 3.7E-08 66.8 2.5 109 17-134 3-112 (240)
48 PF05637 Glyco_transf_34: gala 96.0 0.0035 7.5E-08 64.7 2.0 141 206-359 75-232 (239)
49 PLN00176 galactinol synthase 95.9 0.0045 9.8E-08 66.6 2.7 119 16-149 25-146 (333)
50 KOG1879|consensus 94.4 0.022 4.8E-07 68.9 2.5 55 97-153 1262-1321(1470)
51 cd06914 GT8_GNT1 GNT1 is a fun 94.4 0.021 4.5E-07 60.1 2.0 105 21-134 7-114 (278)
52 COG4092 Predicted glycosyltran 94.0 0.045 9.7E-07 56.2 3.4 60 549-609 79-142 (346)
53 PF11051 Mannosyl_trans3: Mann 92.2 0.41 8.8E-06 50.3 7.4 104 17-134 4-113 (271)
54 PF00535 Glycos_transf_2: Glyc 92.2 1.1 2.4E-05 41.3 9.7 101 479-587 2-105 (169)
55 cd02510 pp-GalNAc-T pp-GalNAc- 89.8 1.1 2.4E-05 47.2 8.1 49 550-605 73-121 (299)
56 cd06420 GT2_Chondriotin_Pol_N 89.3 1.7 3.6E-05 41.5 8.3 44 542-585 61-104 (182)
57 PLN03182 xyloglucan 6-xylosylt 86.0 2.6 5.6E-05 46.4 7.9 144 205-365 195-364 (429)
58 cd02515 Glyco_transf_6 Glycosy 85.8 32 0.00068 36.1 15.3 42 12-54 33-76 (271)
59 KOG1928|consensus 85.6 0.68 1.5E-05 50.2 3.3 43 212-279 241-283 (409)
60 cd04186 GT_2_like_c Subfamily 84.3 10 0.00022 34.9 10.5 43 544-586 58-100 (166)
61 KOG1950|consensus 82.6 1.9 4.2E-05 47.3 5.4 123 208-365 163-288 (369)
62 PF11051 Mannosyl_trans3: Mann 81.2 2.9 6.3E-05 43.9 5.9 31 201-232 84-114 (271)
63 PF03414 Glyco_transf_6: Glyco 81.2 51 0.0011 35.7 15.0 114 208-334 188-312 (337)
64 PF00535 Glycos_transf_2: Glyc 79.9 5.4 0.00012 36.5 6.7 100 17-137 2-105 (169)
65 cd06423 CESA_like CESA_like is 78.6 23 0.00051 32.2 10.6 56 546-607 64-119 (180)
66 cd00761 Glyco_tranf_GTA_type G 76.8 12 0.00026 33.2 7.9 96 18-131 2-97 (156)
67 COG5597 Alpha-N-acetylglucosam 75.5 1.1 2.3E-05 47.4 0.5 37 96-134 154-190 (368)
68 cd02525 Succinoglycan_BP_ExoA 74.8 22 0.00048 35.4 10.0 49 536-586 59-107 (249)
69 cd04195 GT2_AmsE_like GT2_AmsE 73.7 6.2 0.00013 38.2 5.5 54 547-606 67-120 (201)
70 cd06439 CESA_like_1 CESA_like_ 72.5 20 0.00044 36.1 9.1 103 14-136 30-135 (251)
71 cd04186 GT_2_like_c Subfamily 71.8 41 0.00089 30.8 10.4 91 25-134 7-98 (166)
72 cd00899 b4GalT Beta-4-Galactos 71.5 7.1 0.00015 39.8 5.3 70 505-577 3-83 (219)
73 KOG1928|consensus 69.9 2.3 5.1E-05 46.2 1.5 31 116-155 242-272 (409)
74 cd02522 GT_2_like_a GT_2_like_ 69.0 39 0.00086 33.0 10.1 33 549-581 61-93 (221)
75 cd02511 Beta4Glucosyltransfera 68.2 4.7 0.0001 40.7 3.3 40 548-587 59-98 (229)
76 cd06433 GT_2_WfgS_like WfgS an 67.2 48 0.001 31.4 10.1 40 546-585 61-100 (202)
77 cd04185 GT_2_like_b Subfamily 66.6 26 0.00057 33.9 8.2 43 543-586 63-105 (202)
78 PLN03181 glycosyltransferase; 66.2 16 0.00035 40.4 7.0 108 205-333 196-325 (453)
79 cd06434 GT2_HAS Hyaluronan syn 65.6 46 0.00099 32.9 9.9 100 15-136 2-103 (235)
80 cd06423 CESA_like CESA_like is 64.1 40 0.00086 30.6 8.5 94 25-134 7-102 (180)
81 cd04184 GT2_RfbC_Mx_like Myxoc 61.1 7.7 0.00017 37.5 3.2 39 547-585 70-108 (202)
82 cd06439 CESA_like_1 CESA_like_ 60.7 39 0.00084 34.0 8.4 37 549-585 98-134 (251)
83 PF03071 GNT-I: GNT-I family; 59.0 11 0.00023 42.3 4.1 117 11-134 91-214 (434)
84 cd06437 CESA_CaSu_A2 Cellulose 56.7 17 0.00037 36.3 5.0 48 551-605 78-125 (232)
85 cd02514 GT13_GLCNAC-TI GT13_GL 56.6 41 0.00089 36.5 8.0 115 15-134 2-120 (334)
86 KOG3917|consensus 53.9 14 0.0003 37.5 3.6 70 505-574 75-150 (310)
87 cd06421 CESA_CelA_like CESA_Ce 52.3 1.4E+02 0.003 29.3 10.7 41 545-586 70-110 (234)
88 cd04192 GT_2_like_e Subfamily 52.0 72 0.0016 31.1 8.5 39 548-586 70-108 (229)
89 cd02520 Glucosylceramide_synth 51.6 62 0.0013 31.4 7.9 34 552-585 78-111 (196)
90 cd06442 DPM1_like DPM1_like re 49.7 16 0.00035 35.9 3.4 37 549-585 67-103 (224)
91 PRK10073 putative glycosyl tra 49.4 20 0.00042 38.7 4.2 40 547-586 72-111 (328)
92 cd06434 GT2_HAS Hyaluronan syn 49.4 14 0.00029 36.8 2.8 38 548-585 65-102 (235)
93 KOG4748|consensus 49.2 32 0.00069 37.6 5.6 154 208-377 175-348 (364)
94 PRK14583 hmsR N-glycosyltransf 46.6 94 0.002 34.9 9.3 102 12-134 74-179 (444)
95 cd02526 GT2_RfbF_like RfbF is 44.3 32 0.00069 34.1 4.6 55 548-605 60-117 (237)
96 PRK11204 N-glycosyltransferase 44.1 98 0.0021 34.1 8.9 102 13-135 54-159 (420)
97 cd06427 CESA_like_2 CESA_like_ 42.9 28 0.0006 35.1 4.0 40 547-586 71-110 (241)
98 PRK11204 N-glycosyltransferase 41.7 1.6E+02 0.0036 32.4 10.2 39 548-586 122-160 (420)
99 PRK10018 putative glycosyl tra 41.6 1.9E+02 0.0041 30.4 10.1 102 14-134 6-109 (279)
100 cd00761 Glyco_tranf_GTA_type G 40.8 53 0.0011 28.9 5.1 37 545-581 62-98 (156)
101 cd04184 GT2_RfbC_Mx_like Myxoc 40.6 1.4E+02 0.003 28.6 8.4 99 15-130 3-102 (202)
102 cd04192 GT_2_like_e Subfamily 40.2 87 0.0019 30.5 7.0 92 25-130 7-101 (229)
103 cd06913 beta3GnTL1_like Beta 1 39.9 37 0.00081 33.5 4.3 38 547-584 71-108 (219)
104 PF13641 Glyco_tranf_2_3: Glyc 39.4 23 0.0005 35.0 2.7 93 486-585 12-111 (228)
105 PF04488 Gly_transf_sug: Glyco 38.9 17 0.00037 32.1 1.4 33 191-228 63-96 (103)
106 TIGR03472 HpnI hopanoid biosyn 38.4 1.7E+02 0.0037 31.9 9.5 104 11-130 39-145 (373)
107 cd04191 Glucan_BSP_ModH Glucan 37.4 94 0.002 32.2 6.9 53 533-585 66-120 (254)
108 cd04187 DPM1_like_bac Bacteria 36.4 34 0.00073 32.5 3.2 39 546-584 66-104 (181)
109 cd04179 DPM_DPG-synthase_like 36.1 38 0.00083 32.0 3.6 38 547-584 66-103 (185)
110 PF01644 Chitin_synth_1: Chiti 36.0 1.4E+02 0.003 29.2 7.2 112 12-134 37-162 (163)
111 PF05679 CHGN: Chondroitin N-a 36.0 1.9E+02 0.004 33.3 9.6 106 476-583 246-364 (499)
112 cd04195 GT2_AmsE_like GT2_AmsE 34.9 1.9E+02 0.0041 27.6 8.4 101 18-134 3-104 (201)
113 PF04765 DUF616: Protein of un 34.2 60 0.0013 34.8 4.8 80 40-134 87-175 (305)
114 cd06421 CESA_CelA_like CESA_Ce 34.0 2E+02 0.0043 28.1 8.5 98 15-129 3-102 (234)
115 TIGR03469 HonB hopene-associat 33.8 2.9E+02 0.0064 30.2 10.5 114 3-127 30-149 (384)
116 TIGR01556 rhamnosyltran L-rham 33.3 55 0.0012 33.9 4.4 40 547-586 57-99 (281)
117 PLN02726 dolichyl-phosphate be 33.0 42 0.00091 34.0 3.4 37 549-585 82-118 (243)
118 PRK11498 bcsA cellulose syntha 32.4 59 0.0013 39.8 5.0 33 551-583 330-362 (852)
119 cd04190 Chitin_synth_C C-termi 32.2 1E+02 0.0022 31.4 6.1 96 17-147 1-108 (244)
120 TIGR03030 CelA cellulose synth 32.0 60 0.0013 39.0 5.0 35 551-585 219-253 (713)
121 PRK10018 putative glycosyl tra 32.0 55 0.0012 34.5 4.2 42 545-586 70-111 (279)
122 cd04196 GT_2_like_d Subfamily 32.0 2.5E+02 0.0055 26.8 8.8 40 545-584 64-103 (214)
123 PRK14583 hmsR N-glycosyltransf 31.9 2.8E+02 0.006 31.1 10.1 38 548-585 143-180 (444)
124 cd04185 GT_2_like_b Subfamily 31.7 2.1E+02 0.0045 27.5 8.0 91 25-130 7-98 (202)
125 cd02514 GT13_GLCNAC-TI GT13_GL 31.7 5.5E+02 0.012 28.0 11.8 51 551-605 88-138 (334)
126 cd04196 GT_2_like_d Subfamily 30.8 2.6E+02 0.0057 26.7 8.6 93 24-134 7-103 (214)
127 cd06438 EpsO_like EpsO protein 30.5 46 0.00099 31.9 3.1 38 549-586 65-107 (183)
128 cd04188 DPG_synthase DPG_synth 30.4 49 0.0011 32.4 3.3 38 548-585 70-107 (211)
129 cd06420 GT2_Chondriotin_Pol_N 29.8 3.4E+02 0.0073 25.3 9.0 30 25-54 7-36 (182)
130 PF04765 DUF616: Protein of un 29.6 69 0.0015 34.4 4.4 48 195-245 140-188 (305)
131 cd06435 CESA_NdvC_like NdvC_li 29.4 51 0.0011 32.8 3.3 35 551-585 73-109 (236)
132 COG0463 WcaA Glycosyltransfera 28.3 1.3E+02 0.0028 27.4 5.7 41 15-58 5-45 (291)
133 cd06442 DPM1_like DPM1_like re 27.9 1.4E+02 0.0029 29.2 6.1 91 25-134 7-102 (224)
134 cd04179 DPM_DPG-synthase_like 27.9 2E+02 0.0044 26.9 7.1 91 25-134 7-103 (185)
135 TIGR03111 glyc2_xrt_Gpos1 puta 27.0 2.8E+02 0.0061 31.1 9.0 39 548-586 119-157 (439)
136 cd02520 Glucosylceramide_synth 26.9 4.1E+02 0.0089 25.5 9.2 49 15-65 3-54 (196)
137 cd06427 CESA_like_2 CESA_like_ 26.6 2.6E+02 0.0056 28.0 7.9 102 15-134 3-108 (241)
138 PLN02726 dolichyl-phosphate be 26.4 6.6E+02 0.014 25.1 11.0 102 14-134 10-117 (243)
139 PF13641 Glyco_tranf_2_3: Glyc 25.7 61 0.0013 31.9 3.1 104 15-134 3-110 (228)
140 cd02525 Succinoglycan_BP_ExoA 24.3 2.6E+02 0.0055 27.5 7.4 38 15-54 2-41 (249)
141 PF05679 CHGN: Chondroitin N-a 24.2 4E+02 0.0088 30.6 9.7 109 7-130 241-360 (499)
142 PF13733 Glyco_transf_7N: N-te 23.9 74 0.0016 30.0 3.0 69 505-576 48-127 (136)
143 TIGR03472 HpnI hopanoid biosyn 23.3 2.6E+02 0.0056 30.5 7.7 50 535-585 99-151 (373)
144 PRK05454 glucosyltransferase M 23.0 4.9E+02 0.011 31.3 10.3 111 11-134 122-244 (691)
145 COG0761 lytB 4-Hydroxy-3-methy 21.5 1.9E+02 0.004 30.8 5.6 119 427-560 115-239 (294)
146 PF03314 DUF273: Protein of un 20.9 49 0.0011 33.5 1.3 94 201-319 35-128 (222)
147 PRK10073 putative glycosyl tra 20.7 3.2E+02 0.0069 29.4 7.6 39 14-54 7-45 (328)
148 cd02510 pp-GalNAc-T pp-GalNAc- 20.4 4.4E+02 0.0096 27.4 8.5 36 17-54 2-40 (299)
No 1
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=2.8e-56 Score=465.24 Aligned_cols=279 Identities=72% Similarity=1.279 Sum_probs=244.6
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCcc
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYS 94 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~ 94 (664)
||+++|+++.+|.++++++|+||+.|++.+++||||+++++++.++.+.+.+...++++.||++++..+
T Consensus 1 ~~~~iv~~~~~y~~~~~~~i~Sil~n~~~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~~----------- 69 (280)
T cd06431 1 IHVAIVCAGYNASRDVVTLVKSVLFYRRNPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEELKS----------- 69 (280)
T ss_pred CEEEEEEccCCcHHHHHHHHHHHHHcCCCCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHhhh-----------
Confidence 689999999999999999999999999888999999999999999999888887889999998853221
Q ss_pred chhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCccCccccc
Q psy3847 95 GVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFYL 174 (664)
Q Consensus 95 ~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~ 174 (664)
T Consensus 70 -------------------------------------------------------------------------------- 69 (280)
T cd06431 70 -------------------------------------------------------------------------------- 69 (280)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhcc
Q psy3847 175 ADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGK 254 (664)
Q Consensus 175 ~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~ 254 (664)
.++++|+.||++.++|+||+||++||++++||||||||+||++||++||+++++|.+++++|++++.++||.++
T Consensus 70 ------~~~~~~~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~ 143 (280)
T cd06431 70 ------RVSWIPNKHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGN 143 (280)
T ss_pred ------hhccCcccchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhh
Confidence 23456677888877899999999999889999999999999999999999977788899999999988888776
Q ss_pred ccccCCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEEeCCcccccc
Q psy3847 255 LWKNHKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYTLPCQWNVQL 334 (664)
Q Consensus 255 ~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~Lp~~wN~q~ 334 (664)
.++...+++..+.|||||||||||++||+.+++++|...++++......+.++|||+||+++.++|++++.|||+||+|.
T Consensus 144 ~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~ 223 (280)
T cd06431 144 LWKNHRPWPALGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQL 223 (280)
T ss_pred hhhccCCCcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCcccccc
Confidence 54444566666789999999999999999999999988887765445667899999999999999999999999999998
Q ss_pred CCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccchhhHHhh
Q psy3847 335 SDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDGNLLRREL 391 (664)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g~~l~~~~ 391 (664)
+.+... +.|..+.++|+||||+|+.|||..++..++||++|.+|++++|++|||+.
T Consensus 224 ~~~~~~-~~~~~~~~~p~IIHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 279 (280)
T cd06431 224 SDHTRS-EQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRREL 279 (280)
T ss_pred CccchH-hHhhcCcCCCEEEEeCCCCCCCCcCCCChHHHHHHHHHHhcCchhhhhhc
Confidence 766655 55665678999999999999999998789999999999999999999875
No 2
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=9e-51 Score=422.66 Aligned_cols=285 Identities=24% Similarity=0.510 Sum_probs=231.8
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCcc
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYS 94 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~ 94 (664)
|||++|+||++ .+++.++|||++.|+..+++|||++|+...+.+.+.+++|.....+..+|.+... + +|+++++
T Consensus 1 ~~~~vv~~g~~-~~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I----~-~P~~~~~ 74 (304)
T cd06430 1 MHLAVVACGER-LEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPI----T-FPSGNAA 74 (304)
T ss_pred CEEEEEEcCCc-HHHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEE----e-cCccchh
Confidence 69999999965 8999999999999998899999999998788888888998654444444444221 1 1222111
Q ss_pred chhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCccCccccc
Q psy3847 95 GVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFYL 174 (664)
Q Consensus 95 ~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~ 174 (664)
-|.
T Consensus 75 ------------------------------------~ws----------------------------------------- 77 (304)
T cd06430 75 ------------------------------------EWK----------------------------------------- 77 (304)
T ss_pred ------------------------------------hhh-----------------------------------------
Confidence 011
Q ss_pred cccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccch----h
Q psy3847 175 ADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSD----W 250 (664)
Q Consensus 175 ~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~----~ 250 (664)
+..+.++|+||++|++|| ++|||||||||+||.+||+|||+++++|++.+++|++++..+ |
T Consensus 78 --------------~l~~~~~y~RL~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~ 142 (304)
T cd06430 78 --------------KLFKPCAAQRLFLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGW 142 (304)
T ss_pred --------------hcccHHHHHHHHHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhh
Confidence 011346899999999999 899999999999999999999999777988889999988754 6
Q ss_pred hhccccccCCCCCCCC-CceeEEEEEEechhHHh-----------hchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhc
Q psy3847 251 YLGKLWKNHKPWPALG-RGFNTGVILLDLTKLRD-----------ISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISE 318 (664)
Q Consensus 251 y~~~~~~~~~~~p~~~-~yfNSGVmLinL~~~R~-----------~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~ 318 (664)
|.. ....|..| .|||||||||||++||+ .+|++++.++++++ ...+.++|||+||++|++
T Consensus 143 ~~~-----~~~~~~~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~DQDiLN~v~~~ 214 (304)
T cd06430 143 YNR-----FARHPYYGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKY---KLKITWGDQDLINIIFHH 214 (304)
T ss_pred hhh-----hcccCcccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhc---ccCCCCCCHHHHHHHHcC
Confidence 641 11223333 58999999999999999 78999999999876 467889999999999999
Q ss_pred CCCeEEEeCCccccccCCCCCChhhhhh-hcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhcc-chhhHHhhccCCC
Q psy3847 319 HPYLVYTLPCQWNVQLSDNTRSDELCYT-ELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYD-GNLLRRELFGCNL 396 (664)
Q Consensus 319 ~p~~v~~Lp~~wN~q~~~~~~~~~~~~~-~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~-g~~l~~~~~~c~~ 396 (664)
+|+.++.|||+||+|. ++++++..|.. +.++++||||+++.| .+.+.+.||.+|.++.+|+ |+.|+++++. +
T Consensus 215 ~p~~~~~Lp~~wN~~~-d~~~y~~~~~~~~~~~~~~~H~n~~~~---~~~~~~~f~~~~~~~~~~~~g~~~~~~~~~-~- 288 (304)
T cd06430 215 NPEMLYVFPCHWNYRP-DHCMYGSNCKAAEEEGVFILHGNRGVY---HSDKQPAFRAVYEAIREYTFGDDLHQSLLR-P- 288 (304)
T ss_pred CCCeEEEcCccccCCc-cceeecccccccccccceEEEcCCCCC---CCccchHHHHHHHHHHhcccccchHHHhHH-H-
Confidence 9999999999999998 88876678885 568999999999988 2556999999999999999 9999999987 3
Q ss_pred ccchhHHHHhhcCCCCCcchh
Q psy3847 397 TQTTLQQAELSNLNEEDPCYD 417 (664)
Q Consensus 397 ~~~~~~~~~l~~~~~~~~C~~ 417 (664)
||+.|... ..+.|++
T Consensus 289 -----l~~~~~~~-~~~~c~~ 303 (304)
T cd06430 289 -----LELSLQLT-VHTYCGK 303 (304)
T ss_pred -----HHHHhhhh-cccCccc
Confidence 88888544 5789985
No 3
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=100.00 E-value=1.5e-50 Score=429.46 Aligned_cols=184 Identities=43% Similarity=0.815 Sum_probs=165.1
Q ss_pred cEEEEEeeChhhHHHHHHHhhccCCcEEEEEEeCchhHHHHHH---HHhccccccccccEEEEEEeec------------
Q psy3847 478 DVTLVAQLSMDRLQMVEMLFKHWEGPISLTLYMSDAEAQQFLS---YAGNSEALRSRRNIGYHVVYKE------------ 542 (664)
Q Consensus 478 dVTLvTq~s~drL~~l~~l~~~W~GPiS~av~~~~~e~~~~~~---~~~~~~~~~~r~~v~~h~v~~~------------ 542 (664)
|||||||+|+|||++|+++|++|+||||+|||+|+.+.+.+++ .+..++.+.+|++|++|+||+.
T Consensus 1 ~VTL~Th~t~drL~~l~~l~~~W~GPiSvAvf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~H~v~~~~~~~~~~~~~~~ 80 (317)
T PF13896_consen 1 DVTLVTHATVDRLDHLEELCERWDGPISVAVFVPGPDAKQALDAISYLLRCCCPRVRKNVTFHLVFPNSHFPTSCDSIEA 80 (317)
T ss_pred CEEEEEccCHHHHHHHHHHHHhCCCCEEEEEEecchhHHHHHHHHHHHHHhcCHHhHhhEEEEEEeecccCccccccccc
Confidence 7999999999999999999999999999999999988775443 3433444678999999999863
Q ss_pred -----------------------------CCCCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHhcccCCC
Q psy3847 543 -----------------------------GNFYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGH 593 (664)
Q Consensus 543 -----------------------------~~~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~ 593 (664)
+.+||||+|||+||++|+|+|||++||||+||.||++.|++++++.. .
T Consensus 81 ~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~YPiN~LRNvAr~~a~T~~v~~~DvD~~ps~~l~~~l~~~~~~~~---~ 157 (317)
T PF13896_consen 81 NLSSPFSCSDFVRLLSELTSRENNYDPAPNALYPINLLRNVARSGARTDYVFLLDVDFLPSPGLYEKLLRFARRNI---D 157 (317)
T ss_pred ccCCCCCcCchhhhHHHHhhhhhhcccccCCCCChHHHHHHHHHhcCcceEEEecceeeeCcchHHHHHHHhhhhc---c
Confidence 26899999999999999999999999999999999999999998765 4
Q ss_pred CCcEEEEEcceeeccccc-----------------------cCCCCCCCCChhhhhcc------CCceEeecCCCCceEE
Q psy3847 594 GGKKVLVVPAFETQRYRT-----------------------AFPASHAPTNFSRWVNA------TTPYQIEWAPDFEPYI 644 (664)
Q Consensus 594 ~~~~a~VvPaFE~~~~~~-----------------------~~P~~h~~t~~~~W~~~------~~~y~v~~~~~~EPy~ 644 (664)
..++||||||||+..+.. .||.||+||||++|+++ ..+|+|.|+.+|||||
T Consensus 158 ~~~~a~VvPaFE~~~~~~~P~~K~eL~~~~~~~~~~~Fh~~~~~~~h~~t~~~~W~~~~~~~~~~~~y~v~~~~~~EP~~ 237 (317)
T PF13896_consen 158 KSKTAFVVPAFETREGADIPRTKKELLELLKNGKARPFHHKVCPQGHGPTNYDRWFSAPESDELDVPYEVKYEDGWEPYY 237 (317)
T ss_pred CCceEEEEeeeecccCcCCCCCHHHHHHHHHhCchhhccccccccCcCCccHHHHhccCCcCCCcceEEEccCCCccCEE
Confidence 789999999999987521 26888999999999999 5689999999999999
Q ss_pred EEcCCCCCCcccccccCcCC
Q psy3847 645 VAHRDLPRYDTRFVGFGWNK 664 (664)
Q Consensus 645 i~~r~~P~yDerF~gyG~nK 664 (664)
|++|++|+|||||+||||||
T Consensus 238 I~~~~~P~yDErF~~yg~nk 257 (317)
T PF13896_consen 238 IGRRNVPLYDERFRGYGFNK 257 (317)
T ss_pred EccCCCCCCcccccccccch
Confidence 99999999999999999998
No 4
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=2.2e-42 Score=369.84 Aligned_cols=261 Identities=17% Similarity=0.211 Sum_probs=198.9
Q ss_pred cceEEEEEEEeCCCchHHHHHHHHHHHhhCCC-CeEEEEEeCchhHHHHH---HHhhccCCCceeEEEEecccccccccc
Q psy3847 12 CEVIQVAIVCAGYNSTRSLVTLIKSILFYRKN-PLHFHLITDTVALNILQ---TLFSTWSVPQVEVSFYLADSVVEDVSW 87 (664)
Q Consensus 12 ~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~-~l~fhii~d~~s~~~l~---~l~~~~~~~~~~~~fy~~~~~~~~v~~ 87 (664)
..+|||++.+ |.+|.++++++|+||+.|++. +++|||++++++.+..+ ++.+.+ +.++.+|.++... +
T Consensus 23 ~~~i~Iv~~~-D~ny~~~~~vsi~Sil~nn~~~~~~f~Il~~~is~e~~~~l~~l~~~~---~~~i~~~~id~~~--~-- 94 (334)
T PRK15171 23 KNSLDIAYGI-DKNFLFGCGVSIASVLLNNPDKSLVFHVFTDYISDADKQRFSALAKQY---NTRINIYLINCER--L-- 94 (334)
T ss_pred CCceeEEEEC-cHhhHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCHHHHHHHHHHHHhc---CCeEEEEEeCHHH--H--
Confidence 3689999966 459999999999999998765 59999999988755555 444444 5677777765211 0
Q ss_pred cCCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCc
Q psy3847 88 IPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPA 167 (664)
Q Consensus 88 ip~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~ 167 (664)
T Consensus 95 -------------------------------------------------------------------------------- 94 (334)
T PRK15171 95 -------------------------------------------------------------------------------- 94 (334)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeecc
Q psy3847 168 LGRGFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQ 247 (664)
Q Consensus 168 ~~~~~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~ 247 (664)
.++|.+.+.+.++|+||+||++||++++||||||||+||++||++||+++ |.++.++|++.+.
T Consensus 95 ---------------~~~~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~d--l~~~~~aav~~d~ 157 (334)
T PRK15171 95 ---------------KSLPSTKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLD--FAENEIAAVVAEG 157 (334)
T ss_pred ---------------hCCcccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhcc--CCCCeEEEEEecc
Confidence 11223334578899999999999988999999999999999999999997 7768888887665
Q ss_pred c-hhhhccccccCCCCCCC-CCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEE
Q psy3847 248 S-DWYLGKLWKNHKPWPAL-GRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYT 325 (664)
Q Consensus 248 ~-~~y~~~~~~~~~~~p~~-~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~ 325 (664)
. .|+.... .+...|.. +.|||||||||||++||+.++.+++.+++++.- ....+.++|||+||++|.++ +..
T Consensus 158 ~~~~~~~~~--~~l~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~-~~~~~~~~DQDiLN~~~~~~---~~~ 231 (334)
T PRK15171 158 DAEWWSKRA--QSLQTPGLASGYFNSGFLLINIPAWAQENISAKAIEMLADPE-IVSRITHLDQDVLNILLAGK---VKF 231 (334)
T ss_pred chhHHHHHH--HhcCCccccccceecceEEEcHHHHHHhhHHHHHHHHHhccc-cccceeecChhHHHHHHcCC---eEE
Confidence 3 2433211 23344432 359999999999999999999999988776531 12356789999999999999 999
Q ss_pred eCCccccccCCCCCChhhhh-hhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccc
Q psy3847 326 LPCQWNVQLSDNTRSDELCY-TELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDG 384 (664)
Q Consensus 326 Lp~~wN~q~~~~~~~~~~~~-~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g 384 (664)
||++||+|.+........+. ....+|+||||+|+.|||+..+ ..+++++|+.|.+.++
T Consensus 232 L~~~wN~~~~~~~~~~~~~~~~~~~~p~IIHy~G~~KPW~~~~-~~~~~~~f~~~~~~sp 290 (334)
T PRK15171 232 IDAKYNTQFSLNYELKDSVINPVNDETVFIHYIGPTKPWHSWA-DYPVSQYFLKAKEASP 290 (334)
T ss_pred CCHhhCCccchhHHHHhcccccccCCCEEEEECCCCCCCCCCC-CCchHHHHHHHHhcCC
Confidence 99999998643321111122 1246899999999999998766 6778999999999874
No 5
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=5.3e-41 Score=345.41 Aligned_cols=245 Identities=28% Similarity=0.389 Sum_probs=191.4
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCcc
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYS 94 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~ 94 (664)
|||+++++|.+|+++++++|+||+.|++.+++|||++++++.+..+.+-+.+...++++.|++++..... .
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~-~-------- 71 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTKPLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSV-D-------- 71 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCCCeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcc-h--------
Confidence 6899999999999999999999999998899999999998876666555555445778888877521100 0
Q ss_pred chhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCccCccccc
Q psy3847 95 GVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFYL 174 (664)
Q Consensus 95 ~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~ 174 (664)
.
T Consensus 72 --------------------------------------------------------------------~----------- 72 (246)
T cd00505 72 --------------------------------------------------------------------S----------- 72 (246)
T ss_pred --------------------------------------------------------------------h-----------
Confidence 0
Q ss_pred cccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhcc
Q psy3847 175 ADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGK 254 (664)
Q Consensus 175 ~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~ 254 (664)
..+ .++.+.++|+||+||++|| +++||||||+|+||++||++||+++ .++..+|+|+|...++...
T Consensus 73 ---------~~~-~~~~~~~~y~RL~i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~---l~~~~~aav~d~~~~~~~~ 138 (246)
T cd00505 73 ---------EHL-KRPIKIVTLTKLHLPNLVP-DYDKILYVDADILVLTDIDELWDTP---LGGQELAAAPDPGDRREGK 138 (246)
T ss_pred ---------hhh-cCccccceeHHHHHHHHhh-ccCeEEEEcCCeeeccCHHHHhhcc---CCCCeEEEccCchhhhccc
Confidence 000 2445788999999999999 9999999999999999999999997 4678999999876544333
Q ss_pred ccccCCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEEeCCcccccc
Q psy3847 255 LWKNHKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYTLPCQWNVQL 334 (664)
Q Consensus 255 ~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~Lp~~wN~q~ 334 (664)
..+...+++....|||||||||||++||+++..++..+...++ ...+.++|||+||.+|.++|..+..||++||++.
T Consensus 139 ~~~~~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~---~~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~ 215 (246)
T cd00505 139 YYRQKRSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQS---LSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRL 215 (246)
T ss_pred hhhcccCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhh---cccCccCCcHHHHHHHhcCCCeEEECCCeeeEEe
Confidence 2223344555567999999999999999776666555544443 3567899999999999999888999999999998
Q ss_pred CCCCCChhhh-hhhcCCcEEEEcCCCCCCCcc
Q psy3847 335 SDNTRSDELC-YTELTDLKIIHWNSPKKLKVK 365 (664)
Q Consensus 335 ~~~~~~~~~~-~~~~~~~~IIHf~g~~KPW~~ 365 (664)
+..... ..| .+..++++||||+|+.|||.+
T Consensus 216 ~~~~~~-~~~~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 216 TGCYRS-LNCFKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred cCcccc-ccchhhhcCCCEEEEeCCCCCCCCC
Confidence 654443 345 345789999999999999953
No 6
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=8.8e-40 Score=336.85 Aligned_cols=251 Identities=21% Similarity=0.275 Sum_probs=194.1
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCCC--CeEEEEEeCchhHHHHHHHhhccCCCceeEEEEeccccc--ccccccCC
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRKN--PLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVV--EDVSWIPN 90 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~~--~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~--~~v~~ip~ 90 (664)
+||++.++ ++. .+++++.|++.|+++ +++||+++|+.+.+.++.+++.+...++++.||.++... ..+.+
T Consensus 1 ~hiv~~~D--n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~--- 74 (257)
T cd06429 1 IHVVIFSD--NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKV--- 74 (257)
T ss_pred CCEEEEec--chh-HHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhccccc---
Confidence 58899664 677 477888888888765 599999999999999999998887778999999997532 11110
Q ss_pred CCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCccCc
Q psy3847 91 KHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGR 170 (664)
Q Consensus 91 ~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~ 170 (664)
..+.+|...+ +
T Consensus 75 -----------------------------------~~~~~~~~~~------------~---------------------- 85 (257)
T cd06429 75 -----------------------------------DSLMQLESEA------------D---------------------- 85 (257)
T ss_pred -----------------------------------chhhhhhccc------------c----------------------
Confidence 0011111110 0
Q ss_pred cccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchh
Q psy3847 171 GFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDW 250 (664)
Q Consensus 171 ~~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~ 250 (664)
..-.-.|+++|.+.++|+||+||++|| +++||||||||+||++||+|||+++ + +++++|||+|
T Consensus 86 ---------~~~~~~~~~~~~s~~~y~Rl~ip~llp-~~~kvlYLD~Dviv~~dl~eL~~~d--l-~~~~~aav~d---- 148 (257)
T cd06429 86 ---------TSNLKQRKPEYISLLNFARFYLPELFP-KLEKVIYLDDDVVVQKDLTELWNTD--L-GGGVAGAVET---- 148 (257)
T ss_pred ---------ccccccCCccccCHHHHHHHHHHHHhh-hhCeEEEEeCCEEEeCCHHHHhhCC--C-CCCEEEEEhh----
Confidence 001123677888999999999999999 7999999999999999999999997 4 5678888875
Q ss_pred hhccccccCCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhc-CCCCCCChHHHHHHHhcCCCeEEEeCCc
Q psy3847 251 YLGKLWKNHKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTR-LWTSLADQDIFNAIISEHPYLVYTLPCQ 329 (664)
Q Consensus 251 y~~~~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~-~~~~~~DQDiLN~v~~~~p~~v~~Lp~~ 329 (664)
|||||||||||++||+.++++++.+++++..... .....+|||+||.+|.++ +..||++
T Consensus 149 -----------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~---~~~L~~~ 208 (257)
T cd06429 149 -----------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGL---TSPLDPS 208 (257)
T ss_pred -----------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCe---eEECChH
Confidence 7999999999999999999999988887652211 124568999999999999 9999999
Q ss_pred cccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHH
Q psy3847 330 WNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFL 380 (664)
Q Consensus 330 wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~ 380 (664)
||++. ........ .....+++||||+|+.|||...+ ..+++++|+.|+
T Consensus 209 wN~~~-l~~~~~~~-~~~~~~~~IIHy~G~~KPW~~~~-~~~~~~~w~~yl 256 (257)
T cd06429 209 WHVRG-LGYNYGIR-PQDIKAAAVLHFNGNMKPWLRTA-IPSYKELWEKYL 256 (257)
T ss_pred HcccC-Cccccccc-ccccCCcEEEEECCCCCCcCCCC-CChHHHHHHHHh
Confidence 99983 22111011 23457899999999999999876 678999999886
No 7
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=6e-37 Score=337.71 Aligned_cols=273 Identities=15% Similarity=0.265 Sum_probs=206.0
Q ss_pred CcceEEEEEEEeCCCchHHHHHHHHHHHhhCCC--CeEEEEEeCchhHHHHHHHhhccCCCceeEEEEeccccccccccc
Q psy3847 11 TCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKN--PLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWI 88 (664)
Q Consensus 11 ~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~--~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~i 88 (664)
....+||++++++ + ..++++|.|++.|+.+ .++|||++|..+.+.++.++..-...++++.||++++ +.|+
T Consensus 310 d~~~~Hia~~sDN--v-laasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Idd----f~~l 382 (603)
T PLN02718 310 DPDLYHYVVFSDN--V-LACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDD----MNVL 382 (603)
T ss_pred CCcceeEEEEcCC--c-eeEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecch----hccc
Confidence 4567999997644 5 4899999999999544 4999999999998888876653322378999999975 4576
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCcc
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPAL 168 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~ 168 (664)
|+++..-.. -+|.
T Consensus 383 p~~~~~~lk---------~l~s---------------------------------------------------------- 395 (603)
T PLN02718 383 PADYNSLLM---------KQNS---------------------------------------------------------- 395 (603)
T ss_pred cccchhhhh---------hccc----------------------------------------------------------
Confidence 655421000 0000
Q ss_pred CccccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccc
Q psy3847 169 GRGFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQS 248 (664)
Q Consensus 169 ~~~~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~ 248 (664)
..+.|.+.++|+||+||++|| +++||||||+|+||++||++||+++ | +++++|+|+++.
T Consensus 396 -----------------~~~~~~S~~~y~Rl~ipellp-~l~KvLYLD~DvVV~~DL~eL~~iD--l-~~~v~aaVedC~ 454 (603)
T PLN02718 396 -----------------HDPRYISALNHARFYLPDIFP-GLNKIVLFDHDVVVQRDLSRLWSLD--M-KGKVVGAVETCL 454 (603)
T ss_pred -----------------cccccccHHHHHHHHHHHHhc-ccCEEEEEECCEEecCCHHHHhcCC--C-CCcEEEEecccc
Confidence 122456789999999999999 6999999999999999999999997 5 577899999874
Q ss_pred h---hhhc---ccc-cc---CCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHH---HH
Q psy3847 249 D---WYLG---KLW-KN---HKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFN---AI 315 (664)
Q Consensus 249 ~---~y~~---~~~-~~---~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN---~v 315 (664)
. .+.. .+. .+ ...+....+|||+|||||||++||+.++++++..+++.+ ....+.|||.|| ++
T Consensus 455 ~~~~~~~~~~~~lnfs~p~i~~~fn~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n----~~~~l~dqdaLpp~Llv 530 (603)
T PLN02718 455 EGEPSFRSMDTFINFSDPWVAKKFDPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLG----VKRPLWKAGSLPIGWLT 530 (603)
T ss_pred ccccchhhhhhhhhccchhhhcccCCCccccccceEEEeHHHHHhcChHHHHHHHHHhc----cCccccCcccccHHHHH
Confidence 2 2221 000 00 001222357999999999999999999999999888764 223678899987 99
Q ss_pred HhcCCCeEEEeCCccccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccchhhH
Q psy3847 316 ISEHPYLVYTLPCQWNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDGNLLR 388 (664)
Q Consensus 316 ~~~~p~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g~~l~ 388 (664)
|+++ ++.||.+||+.. ..... ..-....++++||||+|+.|||...+ .+.|+.+|.+|..++...|+
T Consensus 531 F~gr---i~~LD~rWNv~g-LG~~~-~i~~~~i~~aaIIHYnG~~KPWle~~-i~~yr~~W~k~v~~~~~~l~ 597 (603)
T PLN02718 531 FYNQ---TVALDKRWHVLG-LGHES-GVGASDIEQAAVIHYDGVMKPWLDIG-IGKYKRYWNIHVPYHHPYLQ 597 (603)
T ss_pred hcCc---eeecChHHhccC-ccccc-cccccccCCCEEEEECCCCCccccCC-hhhHHHHHHhhcCCCChHHH
Confidence 9999 999999999875 22211 11112468999999999999999986 88999999999999987766
No 8
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=3.9e-36 Score=309.34 Aligned_cols=239 Identities=21% Similarity=0.250 Sum_probs=182.2
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCC-CCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCc
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRK-NPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHY 93 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~-~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~ 93 (664)
|||+++++ .+|..+++++++|++.|++ .+++||+++++++.+..+.+-+.+...+.++.|+.++... ..
T Consensus 1 ~~I~~~~d-~~y~~~~~~~l~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~--~~------- 70 (248)
T cd04194 1 MNIVFAID-DNYAPYLAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDD--FK------- 70 (248)
T ss_pred CCEEEEec-HhhHHHHHHHHHHHHhcCCCCceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHH--Hh-------
Confidence 68899664 5999999999999999988 5799999999877666555444443346777877765321 00
Q ss_pred cchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCccCcccc
Q psy3847 94 SGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFY 173 (664)
Q Consensus 94 ~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~ 173 (664)
.
T Consensus 71 ----------------------------------------~--------------------------------------- 71 (248)
T cd04194 71 ----------------------------------------F--------------------------------------- 71 (248)
T ss_pred ----------------------------------------c---------------------------------------
Confidence 0
Q ss_pred ccccccccccccC-CCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhh
Q psy3847 174 LADSVVEDVSWIP-NKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYL 252 (664)
Q Consensus 174 ~~~~~~~~vs~ip-~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~ 252 (664)
.+ ...+.+..+|+||++|+++| +++||||||+|++|++||++||+++ + +++.+|+++|......
T Consensus 72 -----------~~~~~~~~~~~~y~rl~l~~ll~-~~~rvlylD~D~lv~~di~~L~~~~--~-~~~~~aa~~d~~~~~~ 136 (248)
T cd04194 72 -----------FPATTDHISYATYYRLLIPDLLP-DYDKVLYLDADIIVLGDLSELFDID--L-GDNLLAAVRDPFIEQE 136 (248)
T ss_pred -----------CCcccccccHHHHHHHHHHHHhc-ccCEEEEEeCCEEecCCHHHHhcCC--c-CCCEEEEEecccHHHH
Confidence 00 11223578999999999999 9999999999999999999999986 4 6788999988754222
Q ss_pred ccccccCCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEEeCCcccc
Q psy3847 253 GKLWKNHKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYTLPCQWNV 332 (664)
Q Consensus 253 ~~~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~Lp~~wN~ 332 (664)
... +...+.+....||||||||+|+++||+.++.+++.+.++++ .....++|||+||.+|.++ +..||++||+
T Consensus 137 ~~~-~~~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~---~~~~~~~DQd~LN~~~~~~---~~~L~~~~N~ 209 (248)
T cd04194 137 KKR-KRRLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEY---GGRLIYPDQDILNAVLKDK---ILYLPPRYNF 209 (248)
T ss_pred HHH-HhhcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhC---CCceeeCChHHHHHHHhCC---eEEcCccccc
Confidence 110 11223334457999999999999999999999999888875 3457899999999999999 9999999999
Q ss_pred ccCCCCCCh------hhhhhhcCCcEEEEcCCCCCCCc
Q psy3847 333 QLSDNTRSD------ELCYTELTDLKIIHWNSPKKLKV 364 (664)
Q Consensus 333 q~~~~~~~~------~~~~~~~~~~~IIHf~g~~KPW~ 364 (664)
+.+...... .......++++||||+|+.|||.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~ 247 (248)
T cd04194 210 QTGFYYLLKKKSKEEQELEEARKNPVIIHYTGSDKPWN 247 (248)
T ss_pred chhHhHHhhccchhHHHHHHHhcCCEEEEeCCCCCCCC
Confidence 976543220 01224578999999999999995
No 9
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=7.6e-36 Score=325.14 Aligned_cols=294 Identities=19% Similarity=0.303 Sum_probs=217.0
Q ss_pred CcceEEEEEEEeCCCchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhhccCCCceeEEEEeccccccccccc
Q psy3847 11 TCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWI 88 (664)
Q Consensus 11 ~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~i 88 (664)
+..-.|.++.+++ +..+.+.+.|...|++.| ++|||+||..+...++.++..|+..++.+.+++++ .++|+
T Consensus 224 d~~l~Hy~ifSdN---vlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e----~f~wl 296 (534)
T PLN02742 224 DNNLYHFCVFSDN---ILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIE----EFSWL 296 (534)
T ss_pred CCCcceEEEEecc---chhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEec----ccccc
Confidence 4456788886654 778899999999999988 99999999999999999999999999999999995 46787
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCcc
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPAL 168 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~ 168 (664)
+++... . +++|... +....| |+...
T Consensus 297 ~~~~~p----v----------------------------l~ql~~~--------------~~~~~y-------f~~~~-- 321 (534)
T PLN02742 297 NASYVP----V----------------------------LKQLQDS--------------DTQSYY-------FSGSQ-- 321 (534)
T ss_pred ccccch----H----------------------------HHHhhhh--------------hhhhhh-------ccccc--
Confidence 766411 1 1111110 000011 11110
Q ss_pred CccccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccc
Q psy3847 169 GRGFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQS 248 (664)
Q Consensus 169 ~~~~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~ 248 (664)
++ .......-++||.|.++|+||+||++|| +++||||||+|+||++||++||+++ | +++++|+|+|+.
T Consensus 322 ------~~--~~~~~k~r~p~y~s~~~y~R~~lP~llp-~l~KvlYLD~DvVV~~DL~eL~~~D--L-~~~viaAVedC~ 389 (534)
T PLN02742 322 ------DD--GKTEIKFRNPKYLSMLNHLRFYIPEIYP-ALEKVVFLDDDVVVQKDLTPLFSID--L-HGNVNGAVETCL 389 (534)
T ss_pred ------cc--ccccccccCcccccHHHHHHHHHHHHhh-ccCeEEEEeCCEEecCChHHHhcCC--C-CCCEEEEeCchh
Confidence 00 0011112368999999999999999999 7999999999999999999999997 5 588999999874
Q ss_pred h---hhhcccccc----CCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHH---HHhc
Q psy3847 249 D---WYLGKLWKN----HKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNA---IISE 318 (664)
Q Consensus 249 ~---~y~~~~~~~----~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~---v~~~ 318 (664)
. .|...+.-. ..+.....+|||+|||||||++||+.++++....+.+. .....+.||+.||. +|++
T Consensus 390 ~~f~ry~~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~----n~~~~l~d~gaLpp~LLaF~g 465 (534)
T PLN02742 390 ETFHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQ----NVDRTLWKLGTLPPGLLTFYG 465 (534)
T ss_pred hhhhhhhhhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHh----ccccccccccccchHHHHHcC
Confidence 2 122111100 01111235799999999999999999999966555543 34567889999996 4999
Q ss_pred CCCeEEEeCCccccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccchhhH
Q psy3847 319 HPYLVYTLPCQWNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDGNLLR 388 (664)
Q Consensus 319 ~p~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g~~l~ 388 (664)
+ +..||.+||+.. ........+ ...++++||||+|+.|||...+ .+.|+++|.+|+.++...|+
T Consensus 466 ~---~~~LD~rWNv~g-LG~~~~v~~-~~i~~aaILHynG~~KPWl~~~-i~~yr~~W~kYl~~s~~fl~ 529 (534)
T PLN02742 466 L---TEPLDRRWHVLG-LGYDTNIDP-RLIESAAVLHFNGNMKPWLKLA-IERYKPLWERYVNYSHPYLQ 529 (534)
T ss_pred c---ceecChhheecc-cccccccch-hhccCCeEEEECCCCCcccccC-CcccchHHHHHHccCCHHHH
Confidence 9 999999999974 222110112 3578999999999999999886 77899999999999987666
No 10
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=4.9e-35 Score=318.99 Aligned_cols=293 Identities=19% Similarity=0.328 Sum_probs=204.2
Q ss_pred CcceEEEEEEEeCCCchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhhccCCCceeEEEEeccccccccccc
Q psy3847 11 TCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWI 88 (664)
Q Consensus 11 ~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~i 88 (664)
+..-.|+++.+++ +..+.++|.|++.|.+.+ ++|||++|..+....+.++..-...++.+.++++++. +|.
T Consensus 245 dp~l~Hy~ifSdN---vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf----~~l 317 (559)
T PLN02523 245 DPSLYHYAIFSDN---VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDY----KFL 317 (559)
T ss_pred CCCcceEEEecCc---chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehh----hhc
Confidence 4456788886643 899999999999998776 9999999999988888887654444788999998853 221
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhcccc-CCc
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKP-WPA 167 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~-~~~ 167 (664)
..+. ....| .|-.. ++...| |+. ...
T Consensus 318 n~~~----~pvlk----------------------------~l~s~--------------~~~~~~-------f~~~~~~ 344 (559)
T PLN02523 318 NSSY----VPVLR----------------------------QLESA--------------NLQKFY-------FENKLEN 344 (559)
T ss_pred cccc----chHHH----------------------------hhhhh--------------hhhhhh-------ccccccc
Confidence 1110 00000 00000 000000 100 000
Q ss_pred cCccccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeecc
Q psy3847 168 LGRGFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQ 247 (664)
Q Consensus 168 ~~~~~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~ 247 (664)
.. .+. .. -...+++|.+.++|+||+||++|| +++||||||+|+||++||++||+++ | ++.++|+|+|+
T Consensus 345 ~~-----~~~--~~-~k~~~p~ylS~~ny~Rf~IPeLLP-~ldKVLYLD~DVVVq~DLseLw~iD--L-~gkv~aAVeDc 412 (559)
T PLN02523 345 AT-----KDS--SN-MKFRNPKYLSMLNHLRFYLPEMYP-KLHRILFLDDDVVVQKDLTGLWKID--M-DGKVNGAVETC 412 (559)
T ss_pred cc-----ccc--cc-ccccCcchhhHHHHHHHHHHHHhc-ccCeEEEEeCCEEecCCHHHHHhCc--C-CCceEEEehhh
Confidence 00 000 00 012356888999999999999999 7999999999999999999999998 5 57899999987
Q ss_pred ch---hhhccccccCCCCCCC-------CCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHH---H
Q psy3847 248 SD---WYLGKLWKNHKPWPAL-------GRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFN---A 314 (664)
Q Consensus 248 ~~---~y~~~~~~~~~~~p~~-------~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN---~ 314 (664)
.. +|...+ ....|.. .+|||+|||+|||++||+.++++++.. ..+. .....+.|||+|| +
T Consensus 413 ~~~~~r~~~~l---n~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~-w~~l---n~~~~l~DqdaLpp~Li 485 (559)
T PLN02523 413 FGSFHRYAQYL---NFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHY-WQNL---NENRTLWKLGTLPPGLI 485 (559)
T ss_pred hhHHHHHHHhh---cccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHH-HHHh---ccccccccccccchHHH
Confidence 32 222211 1122222 245556999999999999999998753 3332 2346789999995 8
Q ss_pred HHhcCCCeEEEeCCccccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccchhhH
Q psy3847 315 IISEHPYLVYTLPCQWNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDGNLLR 388 (664)
Q Consensus 315 v~~~~p~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g~~l~ 388 (664)
+|+++ ++.||.+||++.- .... .......++++||||+|+.|||...+ .+.|+++|++|+.++...|+
T Consensus 486 vF~gr---i~~LD~rWNvlgl-Gy~~-~i~~~~i~~paIIHYnG~~KPWle~~-i~~yr~~W~kYl~~~~~fl~ 553 (559)
T PLN02523 486 TFYST---TKPLDKSWHVLGL-GYNP-SISMDEIRNAAVIHFNGNMKPWLDIA-MNQFKPLWTKYVDYDMEFVQ 553 (559)
T ss_pred HhcCc---eEecCchhhccCC-ccCC-CccccccCCCEEEEECCCCCccccCC-CCcchHHHHHHHccCCHHHH
Confidence 99999 9999999998742 2211 11223467899999999999998765 67899999999999987766
No 11
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.1e-34 Score=305.69 Aligned_cols=248 Identities=21% Similarity=0.234 Sum_probs=182.6
Q ss_pred ceEEEEEEEeCCCchHHHHHHHHHHHhhCCC-CeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCC
Q psy3847 13 EVIQVAIVCAGYNSTRSLVTLIKSILFYRKN-PLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNK 91 (664)
Q Consensus 13 ~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~-~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~ 91 (664)
++++|++.+ |.||+.+++++|+|+|.|++. .+.||+++++.+.+..+.+-++-..-+..+.++.++.
T Consensus 1 ~~~~Iv~a~-D~nY~~~~gvsI~SiL~~n~~~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~----------- 68 (325)
T COG1442 1 ETIPIAFAF-DKNYLIPAGVSIYSLLEHNRKIFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDI----------- 68 (325)
T ss_pred CcccEEEEc-ccccchhHHHHHHHHHHhCccccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEec-----------
Confidence 368899965 569999999999999999996 7999999999876665554333221133344333321
Q ss_pred CccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCccCcc
Q psy3847 92 HYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRG 171 (664)
Q Consensus 92 ~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~ 171 (664)
.+ ++.
T Consensus 69 -------------------------------------~~-------------------------------~~~------- 73 (325)
T COG1442 69 -------------------------------------EP-------------------------------FLD------- 73 (325)
T ss_pred -------------------------------------hh-------------------------------hhc-------
Confidence 10 000
Q ss_pred cccccccccccccc-CCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccch-
Q psy3847 172 FYLADSVVEDVSWI-PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSD- 249 (664)
Q Consensus 172 ~~~~~~~~~~vs~i-p~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~- 249 (664)
+. ..++++ .++|+|++||+++|+ ++|+||||+|++|+|||++||+++ .+++++|||.|...
T Consensus 74 ------------~~~~~~~~s-~~v~~R~fiadlf~~-~dK~lylD~Dvi~~g~l~~lf~~~---~~~~~~aaV~D~~~~ 136 (325)
T COG1442 74 ------------YPPFTKRFS-KMVLVRYFLADLFPQ-YDKMLYLDVDVIFCGDLSELFFID---LEEYYLAAVRDVFSH 136 (325)
T ss_pred ------------ccccccchH-HHHHHHHHHHHhccc-cCeEEEEecCEEEcCcHHHHHhcC---CCcceEEEEeehhhh
Confidence 11 133444 899999999999994 599999999999999999999998 45888888887532
Q ss_pred hhhccccccCCCCC-CCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEEeCC
Q psy3847 250 WYLGKLWKNHKPWP-ALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYTLPC 328 (664)
Q Consensus 250 ~y~~~~~~~~~~~p-~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~Lp~ 328 (664)
+-..... +...+ ..+.|||||||++|++.||++++.+++.+..++. ...+.++|||+||.+|+++ +..||+
T Consensus 137 ~~~~~~~--~~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~---~~~~~~~DQdiLN~i~~~~---~~~L~~ 208 (325)
T COG1442 137 YMKEGAL--RLEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDK---ENDLLYPDQDILNMIFEDR---VLELPI 208 (325)
T ss_pred hhhhhhh--HhhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhcc---ccccCCccccHHHHHHHhh---hhccCc
Confidence 2111111 11111 1246899999999999999999999999988665 3578999999999999999 999999
Q ss_pred ccccccCCCCCChhhh-hhhcCCcEEEEcCCCCCCCccCCCchhhH
Q psy3847 329 QWNVQLSDNTRSDELC-YTELTDLKIIHWNSPKKLKVKNKHMEFFR 373 (664)
Q Consensus 329 ~wN~q~~~~~~~~~~~-~~~~~~~~IIHf~g~~KPW~~~~~~~~f~ 373 (664)
+||++.+........+ .....++.|+||+|+.|||+..+ .+..|
T Consensus 209 ~YN~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~-~~~~~ 253 (325)
T COG1442 209 RYNAIPYIDSQLKDKYIYPFGDDPVILHYAGPTKPWHSDS-SNYPR 253 (325)
T ss_pred ccceeehhhhccchhhhccCCCCceEEEecCCCCCCcCcc-ccccH
Confidence 9999975543221212 23467899999999999999876 44444
No 12
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=1.7e-34 Score=319.56 Aligned_cols=294 Identities=17% Similarity=0.243 Sum_probs=205.2
Q ss_pred CcceEEEEEEEeCCCchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhhccCCCceeEEEEeccccccccccc
Q psy3847 11 TCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWI 88 (664)
Q Consensus 11 ~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~i 88 (664)
+..-.|.++.+++ .-.+.+.+.|...|++.| +.|||+||..+-..++..|..-......+.+-++++.. |
T Consensus 327 d~~l~Hy~ifSdN---vlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~----~- 398 (629)
T PLN02769 327 DPSLRHYVIFSKN---VLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLI----L- 398 (629)
T ss_pred CCccceEEEEecc---ceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeee----e-
Confidence 3446788886654 677889999999999854 99999999999888888776554445566655555431 2
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCcc
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPAL 168 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~ 168 (664)
.+. + ...+++|+.. ++ ++
T Consensus 399 ~~~-----------------~---------------~~~~~~l~~~-------------~~----~~------------- 416 (629)
T PLN02769 399 KDL-----------------D---------------KFALKQLSLP-------------EE----FR------------- 416 (629)
T ss_pred ccc-----------------c---------------hHHHHhhccc-------------hh----hh-------------
Confidence 000 0 0112222221 00 00
Q ss_pred CccccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccc
Q psy3847 169 GRGFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQS 248 (664)
Q Consensus 169 ~~~~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~ 248 (664)
..|...+ .+. ..--+++|.+.++|+||+||++|| +++||||||+|+||++||++||+++ | +++++|||+++.
T Consensus 417 -~~~~~~~--~~~-~~~~~~eyiS~~nh~RfyIPELLP-~LdKVLYLD~DVVVqgDLseLw~iD--L-~gkviAAVedc~ 488 (629)
T PLN02769 417 -VSFRSVD--NPS-SKQMRTEYLSVFSHSHFLLPEIFK-KLKKVVVLDDDVVVQRDLSFLWNLD--M-GGKVNGAVQFCG 488 (629)
T ss_pred -hhhccCC--CCc-hhccCcccccHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCcHHHHhcCC--C-CCCeEEEehhhh
Confidence 0000000 000 011167899999999999999999 7999999999999999999999998 5 577899998764
Q ss_pred hhhhcc-ccccCCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhh-cCCCCCCChHHHHHHHhcCCCeEEEe
Q psy3847 249 DWYLGK-LWKNHKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLT-RLWTSLADQDIFNAIISEHPYLVYTL 326 (664)
Q Consensus 249 ~~y~~~-~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~-~~~~~~~DQDiLN~v~~~~p~~v~~L 326 (664)
..+... .+.+..++....+|||||||||||++||+.++++++..+++++... ......++|+++|++|+++ ++.|
T Consensus 489 ~rl~~~~~yl~~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~---v~~L 565 (629)
T PLN02769 489 VRLGQLKNYLGDTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDL---IYPL 565 (629)
T ss_pred hhhhhhhhhhcccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCe---EEEC
Confidence 211110 0001122222357999999999999999999999998877765321 2334567889999999999 9999
Q ss_pred CCccccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccchhhH
Q psy3847 327 PCQWNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDGNLLR 388 (664)
Q Consensus 327 p~~wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g~~l~ 388 (664)
|++||++.-. ... .......++++||||+|+.|||...+ .+.|+++|++|+.++...|+
T Consensus 566 D~rWNv~gLG-~~~-~i~~~~i~~paIIHYnG~~KPW~e~~-i~~yr~~W~kYl~~~~~fl~ 624 (629)
T PLN02769 566 DDRWVLSGLG-HDY-GIDEQAIKKAAVLHYNGNMKPWLELG-IPKYKKYWKRFLNRDDRFMD 624 (629)
T ss_pred CHHHcccccc-ccc-cccccccCCcEEEEECCCCCCccCCC-CChHHHHHHHHhccCChHHh
Confidence 9999987311 111 11224467999999999999998875 67899999999999987766
No 13
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=1.4e-34 Score=314.64 Aligned_cols=303 Identities=15% Similarity=0.250 Sum_probs=207.8
Q ss_pred CcceEEEEEEEeCCCchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhhccCCCceeEEEEeccccccccccc
Q psy3847 11 TCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWI 88 (664)
Q Consensus 11 ~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~i 88 (664)
...--|.++.+++ +-.+.+.+.|-+.|++.| +.|||+||..+--..+..+..-......+.+-++++ ++|+
T Consensus 204 d~~l~Hy~ifSdN---vLAasVVvnStv~~a~~p~~~VFHivTD~~ny~aM~~WF~~n~~~~a~v~V~~~e~----f~wl 276 (534)
T PLN02659 204 DNSYFHFVLASDN---ILAASVVANSLVQNALRPHKFVLHIITDRKTYSPMQAWFSLHPLSPAIIEVKALHH----FDWF 276 (534)
T ss_pred CCCcceEEEEecc---eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehh----cccc
Confidence 3445788886654 556778899999998876 999999999987777777654443466666666654 3564
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccc-cCCc
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHK-PWPA 167 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~-~~~~ 167 (664)
..+.- |- +++|=.. .. +.-|++ ..+
T Consensus 277 ~~~~~---------------pv-----------------l~ql~~~--------------~~-------~~~~~~~~~~- 302 (534)
T PLN02659 277 AKGKV---------------PV-----------------LEAMEKD--------------QR-------VRSQFRGGSS- 302 (534)
T ss_pred ccccc---------------HH-----------------HHHHhhh--------------hh-------hhhhhccccc-
Confidence 43321 10 0000000 00 000011 000
Q ss_pred cCcccccccccccc-cccc--CCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEe
Q psy3847 168 LGRGFYLADSVVED-VSWI--PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLV 244 (664)
Q Consensus 168 ~~~~~~~~~~~~~~-vs~i--p~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v 244 (664)
..+-..+..... -+.+ -++.|.|+++|+||+||++|| +++||||||+|+||++||++||+++ | +++++|||
T Consensus 303 --~~~~~~~~~~~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP-~LdKVLYLD~DVVVqgDLseLw~iD--L-~gkv~AAV 376 (534)
T PLN02659 303 --AIVANNTEKPHVIAAKLQALSPKYNSVMNHIRIHLPELFP-SLNKVVFLDDDIVVQTDLSPLWDID--M-NGKVNGAV 376 (534)
T ss_pred --ccccccccCccccccccccCCccceeHHHHHHHHHHHHhh-hcCeEEEeeCCEEEcCchHHHHhCC--C-CCcEEEEe
Confidence 000000000000 0111 378899999999999999999 8999999999999999999999998 5 67799999
Q ss_pred eccch---h-----hhcccccc----CCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHH
Q psy3847 245 ENQSD---W-----YLGKLWKN----HKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIF 312 (664)
Q Consensus 245 ~d~~~---~-----y~~~~~~~----~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiL 312 (664)
+|+.. + +...+... ........+|||||||||||++||+.+++++..++++++. .....+.|||+|
T Consensus 377 eDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~--~~~l~l~DQdaL 454 (534)
T PLN02659 377 ETCRGEDKFVMSKKLKSYLNFSHPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENL--KSDLSLWQLGTL 454 (534)
T ss_pred eccccccchhhhHHHHHhhcccchhhhhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhcc--cccccccccccc
Confidence 98521 1 11100000 0011123469999999999999999999999999987752 134678899999
Q ss_pred ---HHHHhcCCCeEEEeCCccccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccchhhH
Q psy3847 313 ---NAIISEHPYLVYTLPCQWNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDGNLLR 388 (664)
Q Consensus 313 ---N~v~~~~p~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g~~l~ 388 (664)
|++|+++ ++.||.+||+.. ..... .......++++||||+|+.|||...+ .++||++|.+|++++...|+
T Consensus 455 p~~LivF~g~---v~~LD~rWN~~g-Lg~~~-~~~~~~i~~paIIHYnG~~KPW~~~~-~~~yr~~W~kYl~~s~~fl~ 527 (534)
T PLN02659 455 PPGLIAFHGH---VHVIDPFWHMLG-LGYQE-NTSLADAESAGVVHFNGRAKPWLDIA-FPQLRPLWAKYIDSSDKFIK 527 (534)
T ss_pred hHHHHHhcCC---EEECChhheecC-Ccccc-cccccccCCcEEEEECCCCCcccccc-CCcchhHHHHHhccCCHHHH
Confidence 6899999 999999999863 32222 11234568999999999999999987 88999999999999987766
No 14
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=100.00 E-value=1.2e-34 Score=298.04 Aligned_cols=227 Identities=21% Similarity=0.289 Sum_probs=171.1
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhH---HHHHHHhhccCCCceeEEEEecccccccccccCCC
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVAL---NILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNK 91 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~---~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~ 91 (664)
|||+++++|..|+.+++++|+|++.|++.+++||+++++++. +.++++.+.+ ++++.|+.++.... +.
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~~~~~fyil~~~is~e~~~~l~~~~~~~---~~~i~~i~i~~~~~-~~----- 71 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTKSPVKFWFIKNFLSPQFKEFLPEMAKEY---GFEYELVTYKWPRW-LH----- 71 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCCCCEEEEEEeCCCCHHHHHHHHHHHHHh---CCceEEEEecChhh-hh-----
Confidence 689999998999999999999999999878999999998874 4455555555 67788887642100 00
Q ss_pred CccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCccCcc
Q psy3847 92 HYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRG 171 (664)
Q Consensus 92 ~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~ 171 (664)
-.|
T Consensus 72 ---------------~~~-------------------------------------------------------------- 74 (248)
T cd06432 72 ---------------KQT-------------------------------------------------------------- 74 (248)
T ss_pred ---------------ccc--------------------------------------------------------------
Confidence 000
Q ss_pred ccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccch--
Q psy3847 172 FYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSD-- 249 (664)
Q Consensus 172 ~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~-- 249 (664)
..++ ..++|.||+++++||++++||||||+|+||.+||++||+++ | +++++|||++...
T Consensus 75 ---------------~~~~-~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~d--l-~~~~~Aav~d~~~~~ 135 (248)
T cd06432 75 ---------------EKQR-IIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMD--L-KGAPYGYTPFCDSRK 135 (248)
T ss_pred ---------------ccch-hHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcC--c-CCCeEEEeeccccch
Confidence 0000 13568899999999989999999999999999999999998 5 5778898886432
Q ss_pred -------hhhccccccCCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCe
Q psy3847 250 -------WYLGKLWKNHKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYL 322 (664)
Q Consensus 250 -------~y~~~~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~ 322 (664)
|+.+ .+++. .. ...|||||||||||++||+.++++++++.++........+.++|||+||+++.++|
T Consensus 136 ~~~~~~~~~~~-~~~~~--l~-~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~-- 209 (248)
T cd06432 136 EMDGFRFWKQG-YWKSH--LR-GRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVP-- 209 (248)
T ss_pred hcccchhhhhh-hhhhh--cC-CCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCC--
Confidence 1111 11111 11 23599999999999999999999988887765333345678999999999999876
Q ss_pred EEEeCCccccccCCCCCChhhhhh-hcCCcEEEEcCCC
Q psy3847 323 VYTLPCQWNVQLSDNTRSDELCYT-ELTDLKIIHWNSP 359 (664)
Q Consensus 323 v~~Lp~~wN~q~~~~~~~~~~~~~-~~~~~~IIHf~g~ 359 (664)
+..||++||++. .-|.. ....+++||+...
T Consensus 210 i~~Lp~~w~~~~-------~~~~~~~~~~~~~~~~~~~ 240 (248)
T cd06432 210 IFSLPQEWLWCE-------TWCSDESKKKAKTIDLCNN 240 (248)
T ss_pred eEECChHHHHHH-------HHhcccccCccceeecccC
Confidence 999999999986 23442 3678999999763
No 15
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=1.3e-34 Score=314.93 Aligned_cols=307 Identities=17% Similarity=0.261 Sum_probs=210.2
Q ss_pred CCcceEEEEEEEeCCCchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccc
Q psy3847 10 PTCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSW 87 (664)
Q Consensus 10 ~~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ 87 (664)
.+..--|.++.+++ +-.+.+.+.|.+.|++.| +.|||+||..+--..+..+..-......+.+-++++ ++|
T Consensus 202 ~dp~~~Hy~ifSdN---vLAasVvvnStv~~a~~p~~~VFHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~----f~w 274 (533)
T PLN02870 202 SDNSYHHFVLSTDN---ILAASVVVSSTVQSSLKPEKIVFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQ----FDW 274 (533)
T ss_pred cCCcceeEEEEecc---eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEehhh----ccc
Confidence 34556788886654 556778899999998876 999999999987777777654433456666666654 456
Q ss_pred cCCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCc
Q psy3847 88 IPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPA 167 (664)
Q Consensus 88 ip~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~ 167 (664)
+..+.-. .+|. .++-.+.+.. |. +..++-..
T Consensus 275 l~~~~~p----vl~~----------------------~e~~~~~~~~-------------------~~----~~~~~~~~ 305 (533)
T PLN02870 275 LTRENVP----VLEA----------------------VESHNGIRNY-------------------YH----GNHIAGAN 305 (533)
T ss_pred cccccch----HHHH----------------------HhhhHHHHHH-------------------hh----cccccccc
Confidence 4433210 0000 0000011111 00 00000000
Q ss_pred c-CccccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeec
Q psy3847 168 L-GRGFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVEN 246 (664)
Q Consensus 168 ~-~~~~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d 246 (664)
. +..+.. ..... -..++.|.++.+|+||+||++|| +++||||||+|+||++||++||+++ | +++++|||+|
T Consensus 306 ~~~~~~~~---~~~~l-~~~~p~ylS~lny~Rl~LPelLP-~LdKVLYLD~DVVVqgDLseLw~iD--L-~gkviaAVeD 377 (533)
T PLN02870 306 LSETTPRT---FASKL-QARSPKYISLLNHLRIYLPELFP-NLDKVVFLDDDVVIQRDLSPLWDID--L-GGKVNGAVET 377 (533)
T ss_pred cccccchh---hhccc-ccCCccccCHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCcHHHHhhCC--C-CCceEEEEcc
Confidence 0 000000 00000 12478899999999999999999 8999999999999999999999998 4 6789999988
Q ss_pred cch--------hhhccccc----cCCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHH--
Q psy3847 247 QSD--------WYLGKLWK----NHKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIF-- 312 (664)
Q Consensus 247 ~~~--------~y~~~~~~----~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiL-- 312 (664)
+.. .+...++. ...++...++|||||||||||++||+.+++++..++++++.. ....+.|||+|
T Consensus 378 c~~~~~~~~~~~~~~YfNfs~p~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~--~~l~l~DQdaLp~ 455 (533)
T PLN02870 378 CRGEDEWVMSKRFRNYFNFSHPLIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLK--SNLTMWKLGTLPP 455 (533)
T ss_pred ccccchhhhhhhhhhhcccccchhhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhh--cCceecccccccH
Confidence 421 11111110 012333346799999999999999999999999999877632 34678999999
Q ss_pred -HHHHhcCCCeEEEeCCccccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccchhhH
Q psy3847 313 -NAIISEHPYLVYTLPCQWNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDGNLLR 388 (664)
Q Consensus 313 -N~v~~~~p~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g~~l~ 388 (664)
|++|+++ ++.||.+||+.. ..... ..-....++++||||+|+.|||...+ .+.|+.+|.+|++++...|+
T Consensus 456 ~livf~g~---v~~LD~rWN~~g-Lgy~~-~~~~~~i~~aaIIHY~G~~KPW~~~~-~~~yr~~W~kYl~~s~~fl~ 526 (533)
T PLN02870 456 ALIAFKGH---VHPIDPSWHMLG-LGYQS-KTNIESVKKAAVIHYNGQSKPWLEIG-FEHLRPFWTKYVNYSNDFIR 526 (533)
T ss_pred hHHHhcCc---eEECChHHhcCC-CCCcc-cccccccCCcEEEEECCCCCCccccC-ccchhHHHHHHHccCchHhh
Confidence 6899999 999999999864 22222 22234578999999999999998776 78899999999999987766
No 16
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=3e-34 Score=313.35 Aligned_cols=305 Identities=18% Similarity=0.274 Sum_probs=206.2
Q ss_pred CcceEEEEEEEeCCCchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhhccCCCceeEEEEeccccccccccc
Q psy3847 11 TCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWI 88 (664)
Q Consensus 11 ~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~i 88 (664)
+..--|.++.+++ +-.+.+.+.|.+.|++.| +.|||+||..+--..+..+..-+.....+.+-++++ ++|.
T Consensus 208 d~~~~Hy~ifSdN---vLAasVvvnStv~~a~~p~~~VfHvvTD~~ny~aM~~WF~~n~~~~a~v~V~~~~~----f~wl 280 (535)
T PLN02867 208 DPSFHHVVLLTDN---VLAASVVISSTVQNAANPEKLVFHIVTDKKTYTPMHAWFAINSIKSAVVEVKGLHQ----YDWS 280 (535)
T ss_pred CCCcceEEEEecc---eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehh----cccc
Confidence 3456788886654 566778899999998876 999999999987777777654433456666666653 4564
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCcc
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPAL 168 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~ 168 (664)
..++ ++ ..++. + +-+-.|.. |+....
T Consensus 281 ~~~~-~~---v~~~~------e----------------~~~~~~~~--------------------------~~~~~~-- 306 (535)
T PLN02867 281 QEVN-VG---VKEML------E----------------IHRLIWSH--------------------------YYQNLK-- 306 (535)
T ss_pred cccc-cc---HHHHH------H----------------Hhhhhhhh--------------------------hhcccc--
Confidence 4332 10 11100 0 00000110 111100
Q ss_pred CccccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccc
Q psy3847 169 GRGFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQS 248 (664)
Q Consensus 169 ~~~~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~ 248 (664)
...||.......... .-++.|.|+.+|+||+||++|| +++||||||+|+||++||++||+++ | +++++|||.|..
T Consensus 307 ~~~~~~~~~~~~~~~-~~~pkylS~lnYlRflIPeLLP-~LdKVLYLD~DVVVqgDLseLwdiD--L-~gkviaAV~D~~ 381 (535)
T PLN02867 307 ESDFQFEGTHKRSLE-ALSPSCLSLLNHLRIYIPELFP-DLNKIVFLDDDVVVQHDLSSLWELD--L-NGKVVGAVVDSW 381 (535)
T ss_pred ccccccccccccchh-hcChhhhhHHHHHHHHHHHHhh-ccCeEEEecCCEEEcCchHHHHhCc--C-CCCeEEEEeccc
Confidence 001111111111111 2478899999999999999999 8999999999999999999999998 5 567777776531
Q ss_pred --------hhhhccccc-c---CCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHH--
Q psy3847 249 --------DWYLGKLWK-N---HKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNA-- 314 (664)
Q Consensus 249 --------~~y~~~~~~-~---~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~-- 314 (664)
..+...+.. + ..+....++|||||||||||++||+.+++++...+++++.. ....+.|||+||.
T Consensus 382 c~~~~~~~~~~~~YlNfsnp~i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~--~~~~l~dqd~LN~~L 459 (535)
T PLN02867 382 CGDNCCPGRKYKDYLNFSHPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLN--SGLQLWQPGALPPAL 459 (535)
T ss_pred cccccccchhhhhhccccchhhhccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchh--cccccccccccchHH
Confidence 001111100 0 11222345799999999999999999999999888876521 2346789999996
Q ss_pred -HHhcCCCeEEEeCCccccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccchhhH
Q psy3847 315 -IISEHPYLVYTLPCQWNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDGNLLR 388 (664)
Q Consensus 315 -v~~~~p~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g~~l~ 388 (664)
+|+++ ++.||.+||++. .............++++||||+|+.|||...+ .+.||++|.+|++++...++
T Consensus 460 lvF~g~---v~~LD~rWNv~g-Lgy~~~~~~~~~i~~paIIHYnG~~KPW~e~~-~~~yR~~W~kyl~~~~~fl~ 529 (535)
T PLN02867 460 LAFKGH---VHPIDPSWHVAG-LGSRPPEVPREILESAAVLHFSGPAKPWLEIG-FPEVRSLWYRHVNFSDKFIR 529 (535)
T ss_pred HHhcCc---EEECChhhcccC-CCcccccchhhhcCCcEEEEECCCCCcccccC-CCchhHHHHHhcCccchHHH
Confidence 99999 999999999953 32222111223468999999999999999987 78999999999999987665
No 17
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=7.2e-34 Score=312.41 Aligned_cols=293 Identities=19% Similarity=0.331 Sum_probs=205.0
Q ss_pred cceEEEEEEEeCCCchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccC
Q psy3847 12 CEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIP 89 (664)
Q Consensus 12 ~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip 89 (664)
..-.|.++.+++ +-.+.+.+.|.+.|.+.| +.|||+||..+--..+..|..-......+.+-++++ +.|+.
T Consensus 329 p~l~Hy~ifSdN---VLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~V~nie~----f~wln 401 (639)
T PLN02829 329 PQLYHYALFSDN---VLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQNIEE----FTWLN 401 (639)
T ss_pred CccceEEEEecc---eeEEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhhCCCccceEEEEehhh----ccccc
Confidence 446777776644 566778899999998876 999999999987777777655443466666666654 45644
Q ss_pred CCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCccC
Q psy3847 90 NKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALG 169 (664)
Q Consensus 90 ~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~ 169 (664)
.++ ++ . +++|-.. +....| |+-+..
T Consensus 402 ~~~-~p---v----------------------------l~ql~~~--------------~~~~~y-------f~~~~~-- 426 (639)
T PLN02829 402 SSY-SP---V----------------------------LKQLGSQ--------------SMIDYY-------FRAHRA-- 426 (639)
T ss_pred ccc-cH---H----------------------------HHHhhhh--------------hhhhhh-------hhcccc--
Confidence 331 11 0 1111000 000111 110000
Q ss_pred ccccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccch
Q psy3847 170 RGFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSD 249 (664)
Q Consensus 170 ~~~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~ 249 (664)
..+ .-.-.-+++|.+.++|+||+||++|| +++||||||+|+||++||++||+++ | +++++|||+++..
T Consensus 427 ----~~~----~~~k~r~p~ylS~lnY~RfyLPeLLP-~LdKVLYLD~DVVVqgDLseLw~iD--L-~gkviAAVedc~~ 494 (639)
T PLN02829 427 ----NSD----SNLKYRNPKYLSILNHLRFYLPEIFP-KLNKVLFLDDDIVVQKDLTGLWSID--L-KGNVNGAVETCGE 494 (639)
T ss_pred ----Ccc----cccccCCcchhhHHHHHHHHHHHHhc-ccCeEEEEeCCEEeCCChHHHHhCC--C-CCceEEEeccchh
Confidence 000 00112367888999999999999999 7999999999999999999999998 5 5778999998642
Q ss_pred ---hhhcccc-cc---CCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHH---hcC
Q psy3847 250 ---WYLGKLW-KN---HKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAII---SEH 319 (664)
Q Consensus 250 ---~y~~~~~-~~---~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~---~~~ 319 (664)
+|...+. .+ ...+....+|||||||||||++||+.++++++..+++.+ ....+.||++||.++ +++
T Consensus 495 ~f~r~~~~l~fs~p~i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n----~~r~L~dlgaLPp~Ll~F~g~ 570 (639)
T PLN02829 495 SFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLN----HDRQLWKLGTLPPGLITFWKR 570 (639)
T ss_pred hhhhhhhhhhccchHhhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHc----cCCccccccCCChHHHHhcCc
Confidence 1211110 00 011122357999999999999999999999999887654 223468899999874 888
Q ss_pred CCeEEEeCCccccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccchhhH
Q psy3847 320 PYLVYTLPCQWNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDGNLLR 388 (664)
Q Consensus 320 p~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g~~l~ 388 (664)
++.||.+||+..-. ... .......++++||||+|+.|||...+ .+.|+.+|.+|+.++...|+
T Consensus 571 ---i~~LD~rWNv~GLG-y~~-~v~~~~i~~aaIIHynG~~KPWle~~-i~~yr~lW~kYl~~~~~fl~ 633 (639)
T PLN02829 571 ---TYPLDRSWHVLGLG-YNP-NVNQRDIERAAVIHYNGNMKPWLEIG-IPKYRNYWSKYVDYDQVYLR 633 (639)
T ss_pred ---eEecChhheecCCC-CCc-ccchhcccCCeEEEECCCCCccccCC-cccchHHHHHHHhcCchHHH
Confidence 99999999998532 222 12224578899999999999999887 77899999999999987766
No 18
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.98 E-value=2.5e-32 Score=299.71 Aligned_cols=296 Identities=21% Similarity=0.360 Sum_probs=204.8
Q ss_pred CcceEEEEEEEeCCCchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhhccCCCceeEEEEeccccccccccc
Q psy3847 11 TCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWI 88 (664)
Q Consensus 11 ~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~i 88 (664)
...-.|.++.+++ +-.+.+.+.|-+.|.+.| +.|||+||..+--..+..|..-......+.+-++++ +.|+
T Consensus 342 dp~l~Hy~ifSDN---VLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM~~WF~~n~~~~A~V~V~nie~----f~wl 414 (657)
T PLN02910 342 DPSLYHYAIFSDN---VLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKMWFIINPPAKATIQVENIDD----FKWL 414 (657)
T ss_pred CCcceeEEEEecc---eeeEEeehhhhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEeehhh----cccc
Confidence 3446777776644 566788999999998876 999999999987777777655443456666666654 4564
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhcccc-CC-
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKP-WP- 166 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~-~~- 166 (664)
..+. + .. ++.|... . +...| |+- ++
T Consensus 415 n~~~-~---pv----------------------------l~qles~--~------------~~~~y-------f~~~~~~ 441 (657)
T PLN02910 415 NSSY-C---SV----------------------------LRQLESA--R------------IKEYY-------FKANHPS 441 (657)
T ss_pred cccc-c---HH----------------------------HHHHhhh--h------------hhhhh-------hhccccc
Confidence 4332 1 11 1111111 0 00011 110 00
Q ss_pred ccCccccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeec
Q psy3847 167 ALGRGFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVEN 246 (664)
Q Consensus 167 ~~~~~~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d 246 (664)
....+ ..--..-+++|.+.++|+||+||++|| +++||||||+|+||++||++||+++ + ++.++|++++
T Consensus 442 ~~~~~--------~~~~k~r~p~ylS~lnY~Rf~LPelLp-~l~KVLYLD~DVVV~gDLseLw~iD--L-~g~v~AAVed 509 (657)
T PLN02910 442 SLSAG--------ADNLKYRNPKYLSMLNHLRFYLPEVYP-KLEKILFLDDDIVVQKDLTPLWSID--M-QGMVNGAVET 509 (657)
T ss_pred ccccc--------ccccccCCcchhhHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCchHHHHhCC--c-CCceEEEecc
Confidence 00000 000012367889999999999999999 7999999999999999999999998 4 5778999988
Q ss_pred cch---hhhcccccc----CCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHH---HHH
Q psy3847 247 QSD---WYLGKLWKN----HKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFN---AII 316 (664)
Q Consensus 247 ~~~---~y~~~~~~~----~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN---~v~ 316 (664)
+.. +|...+... ...+....+|||+|||+|||++||+.++++....+. +. .....+.||+.|| ++|
T Consensus 510 c~~~f~r~~~ylnfs~P~i~~yFNs~aCyfNsGVmVIDL~~WRe~nITe~ye~w~-el---n~~~~L~dqgsLPpgLLvF 585 (657)
T PLN02910 510 CKESFHRFDKYLNFSNPKISENFDPNACGWAFGMNMFDLKEWRKRNITGIYHYWQ-DL---NEDRTLWKLGSLPPGLITF 585 (657)
T ss_pred cchhhhhhhhhhccCChhhhhccCCCCceeecccEEEeHHHHHHhhHHHHHHHHH-Hh---cccccccccCCCChHHHHH
Confidence 643 222111000 001112347899999999999999999998554433 32 3567899999999 799
Q ss_pred hcCCCeEEEeCCccccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccchhhH
Q psy3847 317 SEHPYLVYTLPCQWNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDGNLLR 388 (664)
Q Consensus 317 ~~~p~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g~~l~ 388 (664)
+++ ++.||.+||+..-. ... .......++++||||+|+.|||...+ .+.|+.+|.+|+.++...|+
T Consensus 586 ~g~---i~pLD~rWNv~GLG-yd~-~v~~~~i~~AAVLHynG~~KPWl~l~-i~~Yr~~W~kYl~~d~~fl~ 651 (657)
T PLN02910 586 YNL---TYPLDRSWHVLGLG-YDP-ALNQTEIENAAVVHYNGNYKPWLDLA-IAKYKPYWSRYVQYDNPYLQ 651 (657)
T ss_pred hCc---eeecCchheecCCC-CCc-ccccccccCcEEEEeCCCCCcccccC-cccchHHHHHHccCCChHHH
Confidence 999 99999999998522 211 11223578899999999999999886 78999999999999987766
No 19
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.97 E-value=1.5e-31 Score=272.50 Aligned_cols=169 Identities=25% Similarity=0.358 Sum_probs=119.4
Q ss_pred CCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeecc--chhhhccccccCCCCCC
Q psy3847 187 NKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQ--SDWYLGKLWKNHKPWPA 264 (664)
Q Consensus 187 ~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~--~~~y~~~~~~~~~~~p~ 264 (664)
...+.+..+|+||+++++|+ ++|||||||+||+|.+||++||+++ .+++.+|++++. ...............+.
T Consensus 78 ~~~~~~~~~~~rl~i~~ll~-~~drilyLD~D~lv~~dl~~lf~~~---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 153 (250)
T PF01501_consen 78 SKRHFSPATFARLFIPDLLP-DYDRILYLDADTLVLGDLDELFDLD---LQGKYLAAVEDESFDNFPNKRFPFSERKQPG 153 (250)
T ss_dssp CCTCGGGGGGGGGGHHHHST-TSSEEEEE-TTEEESS-SHHHHC------TTSSEEEEE----HHHHTSTTSSEEECEST
T ss_pred ccccccHHHHHHhhhHHHHh-hcCeEEEEcCCeeeecChhhhhccc---chhhhccccccchhhhhhhcccchhhcccCc
Confidence 44556789999999999996 9999999999999999999999987 447788888771 11000000000111122
Q ss_pred CCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEEeCCccccccCCCCCChhhh
Q psy3847 265 LGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYTLPCQWNVQLSDNTRSDELC 344 (664)
Q Consensus 265 ~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~Lp~~wN~q~~~~~~~~~~~ 344 (664)
...|||||||++|+++||+.++.+++.+..+.. .....++||++||.+|.++ +..||++||++....... ..+
T Consensus 154 ~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~DQ~~ln~~~~~~---~~~L~~~~N~~~~~~~~~-~~~ 226 (250)
T PF01501_consen 154 NKPYFNSGVMLFNPSKWRKENILQKLIEWLEQN---GMKLGFPDQDILNIVFYGN---IKPLPCRYNCQPSWYNQS-DDY 226 (250)
T ss_dssp TTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHT---TTT-SSCHHHHHHHHHTTG---EEEEEGGGSEEHHHHHHT-HHH
T ss_pred ccccccCcEEEEeechhhhhhhhhhhhhhhhhc---ccccCcCchHHHhhhccce---eEEECchhcccccccccc-chh
Confidence 357999999999999999999999888886664 2357899999999999999 999999999997443111 223
Q ss_pred h-hhcCCcEEEEcCCCCCCCccC
Q psy3847 345 Y-TELTDLKIIHWNSPKKLKVKN 366 (664)
Q Consensus 345 ~-~~~~~~~IIHf~g~~KPW~~~ 366 (664)
. ...++++||||+|..|||...
T Consensus 227 ~~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 227 FNPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp HHHHGCC-SEEE--SSS-TTSTT
T ss_pred hHhhcCCeEEEEeCCCCcCCCCC
Confidence 3 456899999999999999753
No 20
>KOG3765|consensus
Probab=99.97 E-value=7.3e-32 Score=289.92 Aligned_cols=286 Identities=39% Similarity=0.636 Sum_probs=212.1
Q ss_pred EEEeeccchhhhccccccCCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCC
Q psy3847 241 IGLVENQSDWYLGKLWKNHKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHP 320 (664)
Q Consensus 241 ~a~v~d~~~~y~~~~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p 320 (664)
++.+..++ ..+ +....+||+.++++|.|++++.+.++|+..|..++...+... |++
T Consensus 5 ~~~~~~~~---~~~-~~~~~~~~~l~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~------------d~~-------- 60 (386)
T KOG3765|consen 5 LGFVLNQS---LIR-WKKSSPWPALGRGLNTGVILLYLDGLRKVGWYFLWRSLLFRE------------DIF-------- 60 (386)
T ss_pred hccccchh---hhh-ccccccchhhhcccccceEEEeecchhhhhHHHHHHHHHhcc------------Ccc--------
Confidence 44455444 223 456779999999999999999999999888776665544321 322
Q ss_pred CeEEEeCCccccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhccchhhHHhhccCCCccch
Q psy3847 321 YLVYTLPCQWNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYDGNLLRRELFGCNLTQTT 400 (664)
Q Consensus 321 ~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~g~~l~~~~~~c~~~~~~ 400 (664)
|-||+++..++ +.++.+..+.+..||.|+ +.-.+|.|+....+
T Consensus 61 -------~~~~v~La~h~---~~~~~~~~~~~~~~W~~P---------------------------ls~~lf~~~~d~~~ 103 (386)
T KOG3765|consen 61 -------CLENVTLATHT---ESDYLDNLEPKATRWRGP---------------------------LSFALFALPLDFHS 103 (386)
T ss_pred -------ccCceeeeccc---ccchhhccccccccCCCC---------------------------ceeEEeecccCCCc
Confidence 89999998887 345556778899999998 22233455444333
Q ss_pred ---hHHHHhhcCCCCCcchhhhhhhhhhcccceeeeecccccCCCCCchhhhhhhhhhhhhhhhcCCCCcccccccCCCC
Q psy3847 401 ---LQQAELSNLNEEDPCYDLRRSKLTSLRTHLYFLEYEYEASSDGNDVTLVAQLSMDRLQMVEINPNNVDEYEASSDGN 477 (664)
Q Consensus 401 ---~~~~~l~~~~~~~~C~~~~~~~~~~~Rt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (664)
..++++..+ .+|++.++. ..+.|++|........ +| +.
T Consensus 104 ~~~~~~~~~~~~---~~~~~~~~~---~~~~H~~f~~~~~~~~--------------------~~-------------p~ 144 (386)
T KOG3765|consen 104 NSALEQRYLAKV---HECDDLFLK---KVTVHFLFRVSPDPQV--------------------LC-------------PI 144 (386)
T ss_pred hhHHHHHHHHhc---CcchHhhhh---heeeEEEeccCccccc--------------------CC-------------cc
Confidence 223366555 555555444 7899988886444211 11 11
Q ss_pred cEEEEEeeChhhHHHHHHHhhccCCcEEEEEEeCchhHHHHHHHHhccccccccccEEEEEEeecCCCCchhhHHHHHhh
Q psy3847 478 DVTLVAQLSMDRLQMVEMLFKHWEGPISLTLYMSDAEAQQFLSYAGNSEALRSRRNIGYHVVYKEGNFYPINTLRNVALN 557 (664)
Q Consensus 478 dVTLvTq~s~drL~~l~~l~~~W~GPiS~av~~~~~e~~~~~~~~~~~~~~~~r~~v~~h~v~~~~~~yPiN~LRNvA~~ 557 (664)
..|+ ++.+.|..|.| +.+... .+..++ +.++.||+|.+||+||.
T Consensus 145 ~~~~----------~~~~~c~~~~~------------------~~~~~~---~~~~~~-----~~~~~YP~Nl~RNvAr~ 188 (386)
T KOG3765|consen 145 EDTL----------RLLESCQEFPG------------------LAKLTP---ILEEIS-----RVGQLYPFNLMRNVARK 188 (386)
T ss_pred hhhh----------HHHHhccchhh------------------hhhcch---hhhhhc-----cccccCchHHHHHHHHh
Confidence 2222 88999999999 111111 111111 67899999999999999
Q ss_pred cCCCCeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEcceeeccccc------------------------cC
Q psy3847 558 QVSTPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFETQRYRT------------------------AF 613 (664)
Q Consensus 558 ~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE~~~~~~------------------------~~ 613 (664)
+|.|+|+|++|+||+||.||++.++.+++++.. ...+.|+|||+||+...+. .|
T Consensus 189 ga~t~~~l~sD~dm~~S~gl~~~~~~~~~ql~~--~~~~~vlvi~~FE~~~~~~~~P~~k~eL~~~~~~~~~~~Fh~~~~ 266 (386)
T KOG3765|consen 189 GANTDYMLMSDIDMVPSYGLADMLKKILNQLDD--GKKKKVLVIPAFETDLPNALFPHNKDELLVLLCNGTARPFHHKYF 266 (386)
T ss_pred hcCCCcEEEEeeeeeeccchHHHHHHHHHHhhc--ccccEEEEeeehhcccccccccCCHHHHHHHHhcCCcccceeccc
Confidence 999999999999999999999999999998765 4667799999999988632 26
Q ss_pred CCCCCCCChhhhhccC------CceEeecCCCCceEEEEcCCCCCCcccccccCcCC
Q psy3847 614 PASHAPTNFSRWVNAT------TPYQIEWAPDFEPYIVAHRDLPRYDTRFVGFGWNK 664 (664)
Q Consensus 614 P~~h~~t~~~~W~~~~------~~y~v~~~~~~EPy~i~~r~~P~yDerF~gyG~nK 664 (664)
|.||.+||+.+|+..+ .++.|.|+..|||++|+.+++|.|||||.|+||||
T Consensus 267 ~~~h~~~n~~~w~~~s~~s~~~~~~~v~~~~~~Ep~~vl~~~~p~yd~ry~~~g~~~ 323 (386)
T KOG3765|consen 267 PICHEGTNLSEWVNHGNRSLEHTVYLVAYRNSWEPQVVLHREDPAYDERYFPLGHNK 323 (386)
T ss_pred cccccCCCccceeecCCcccccchhhhhhccCCccEEEccCCCcchhhhhCccccch
Confidence 8889999999999965 47888999999999999999999999999999986
No 21
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.92 E-value=9.4e-25 Score=224.09 Aligned_cols=141 Identities=18% Similarity=0.173 Sum_probs=105.0
Q ss_pred hhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhccccccCCCCCCCCCceeEE
Q psy3847 193 VYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFNTG 272 (664)
Q Consensus 193 ~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~~~~~~~~~p~~~~yfNSG 272 (664)
..+|.||+++++. +++||||||+|++|.+||++||++ +..+|++++.. + +.|||||
T Consensus 76 ~~~~~kl~~~~l~--~~drvlylD~D~~v~~~i~~Lf~~------~~~~~a~~d~~-------------~---~~~fNsG 131 (240)
T cd02537 76 KDTYTKLRLWNLT--EYDKVVFLDADTLVLRNIDELFDL------PGEFAAAPDCG-------------W---PDLFNSG 131 (240)
T ss_pred HHHhHHHHhcccc--ccceEEEEeCCeeEccCHHHHhCC------CCceeeecccC-------------c---cccccce
Confidence 4678999999974 699999999999999999999976 23355555431 1 2489999
Q ss_pred EEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEEeCCccccccCCCCCChhhhhhhcCCcE
Q psy3847 273 VILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYTLPCQWNVQLSDNTRSDELCYTELTDLK 352 (664)
Q Consensus 273 VmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~~ 352 (664)
||++|++. ...+.+.+.+.+. ....++|||+||.+|.+++ .+..||++||++.+..... ..+....++++
T Consensus 132 v~l~~~~~----~~~~~~~~~~~~~----~~~~~~DQdiLN~~~~~~~-~~~~l~~~yN~~~~~~~~~-~~~~~~~~~~~ 201 (240)
T cd02537 132 VFVLKPSE----ETFNDLLDALQDT----PSFDGGDQGLLNSYFSDRG-IWKRLPFTYNALKPLRYLH-PEALWFGDEIK 201 (240)
T ss_pred EEEEcCCH----HHHHHHHHHHhcc----CCCCCCCHHHHHHHHcCCC-CEeECCcceeeehhhhccC-chhhcccCCcE
Confidence 99999964 2223334444332 3367899999999999885 4899999999997544322 12123457899
Q ss_pred EEEcCCCCCCCccCC
Q psy3847 353 IIHWNSPKKLKVKNK 367 (664)
Q Consensus 353 IIHf~g~~KPW~~~~ 367 (664)
||||+|+.|||...+
T Consensus 202 iiHf~g~~KPW~~~~ 216 (240)
T cd02537 202 VVHFIGGDKPWSWWR 216 (240)
T ss_pred EEEEeCCCCCCCCCc
Confidence 999999999998765
No 22
>PLN00176 galactinol synthase
Probab=99.91 E-value=2.5e-23 Score=220.37 Aligned_cols=151 Identities=23% Similarity=0.263 Sum_probs=106.7
Q ss_pred hhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccch---h-----hh-cccc--ccCCCCC
Q psy3847 195 GLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSD---W-----YL-GKLW--KNHKPWP 263 (664)
Q Consensus 195 ~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~---~-----y~-~~~~--~~~~~~p 263 (664)
+|.||.++++. +++||||||+|++|.++|++||++. .+. +|+|.|+.. | |. +... ..+..||
T Consensus 101 ~~tKl~iw~l~--~ydkvlyLDaD~lv~~nid~Lf~~~----~~~-~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp 173 (333)
T PLN00176 101 NYSKLRIWEFV--EYSKMIYLDGDIQVFENIDHLFDLP----DGY-FYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWP 173 (333)
T ss_pred hhhhhhhcccc--ccceEEEecCCEEeecChHHHhcCC----Ccc-eEEEecccccccccccccccccccccchhhccch
Confidence 46688898876 6999999999999999999999874 344 455554321 1 00 0000 0123454
Q ss_pred C-C----CCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEEeCCccccccCCCC
Q psy3847 264 A-L----GRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYTLPCQWNVQLSDNT 338 (664)
Q Consensus 264 ~-~----~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~Lp~~wN~q~~~~~ 338 (664)
. . ..||||||||+|++.|+..++. +.++. .....++|||+||.+|.++ +..||.+||++.....
T Consensus 174 ~~~g~~~~~yFNSGVlvinps~~~~~~ll----~~l~~----~~~~~f~DQD~LN~~F~~~---~~~Lp~~YN~~~~~~~ 242 (333)
T PLN00176 174 AELGPPPPLYFNAGMFVFEPSLSTYEDLL----ETLKI----TPPTPFAEQDFLNMFFRDI---YKPIPPVYNLVLAMLW 242 (333)
T ss_pred hhccCCCCCeEEeEEEEEEcCHHHHHHHH----HHHHh----cCCCCCCCHHHHHHHHcCc---EEECCchhcCchhhhh
Confidence 2 1 2499999999999999865543 33333 2346789999999999999 9999999999875433
Q ss_pred CChhhhhhhcCCcEEEEcCC-CCCCCcc
Q psy3847 339 RSDELCYTELTDLKIIHWNS-PKKLKVK 365 (664)
Q Consensus 339 ~~~~~~~~~~~~~~IIHf~g-~~KPW~~ 365 (664)
+. ..... .++++||||+| +.|||..
T Consensus 243 ~~-~~~~~-~~~vkIIHY~~~~~KPW~~ 268 (333)
T PLN00176 243 RH-PENVE-LDKVKVVHYCAAGSKPWRY 268 (333)
T ss_pred hC-hhhcc-cCCcEEEEeeCCCCCCCCC
Confidence 32 22222 56899999997 6899974
No 23
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.77 E-value=5.5e-18 Score=175.97 Aligned_cols=141 Identities=18% Similarity=0.176 Sum_probs=104.3
Q ss_pred hhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhccccccCCCCCCCCCceeEEEE
Q psy3847 195 GLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFNTGVI 274 (664)
Q Consensus 195 ~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~~~~~~~~~p~~~~yfNSGVm 274 (664)
+|.||.++++ . +++||||||||++|+++|++||+++ .+.. +|+ ++. .| |||||||
T Consensus 80 ~~tKl~~~~l-~-~y~kvlyLDaD~l~~~~ideLf~~~---~~~~-~Aa-p~~-------------~~-----~FNSGvm 134 (278)
T cd06914 80 SLTKLRAFNQ-T-EYDRIIYFDSDSIIRHPMDELFFLP---NYIK-FAA-PRA-------------YW-----KFASHLM 134 (278)
T ss_pred HHHHHHhccc-c-ceeeEEEecCChhhhcChHHHhcCC---cccc-eee-ecC-------------cc-----eecceeE
Confidence 5899999999 3 7999999999999999999999875 2223 333 210 11 8999999
Q ss_pred EEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcC-----CCeEEEeCCc-cccccCCCCCCh-------
Q psy3847 275 LLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEH-----PYLVYTLPCQ-WNVQLSDNTRSD------- 341 (664)
Q Consensus 275 LinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~-----p~~v~~Lp~~-wN~q~~~~~~~~------- 341 (664)
|||++.|+..++.++..+.... ....+|||+||.+|.++ |+ +..||.+ ||+..+......
T Consensus 135 vi~ps~~~~~~l~~~~~~~~~~------~~~~~DQdiLN~~~~~~~~~~~~~-~~~Lp~~~y~llt~~~r~~~~~~~l~~ 207 (278)
T cd06914 135 VIKPSKEAFKELMTEILPAYLN------KKNEYDMDLINEEFYNSKQLFKPS-VLVLPHRQYGLLTGEFREKLHKSFLSN 207 (278)
T ss_pred EEeCCHHHHHHHHHHHHHhccc------CCCCCChHHHHHHHhCCccccCcc-eEEcCccccccCChhhcccCHHHhhcc
Confidence 9999999987776655544321 23688999999999988 44 8899997 999875322110
Q ss_pred -----hh--hhhhcCCcEEEEcCCC--CCCCccCC
Q psy3847 342 -----EL--CYTELTDLKIIHWNSP--KKLKVKNK 367 (664)
Q Consensus 342 -----~~--~~~~~~~~~IIHf~g~--~KPW~~~~ 367 (664)
+. -.+..+++++|||+.. .|||....
T Consensus 208 ~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 208 AQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred ccccccccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 00 0112478999999987 79998764
No 24
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=99.59 E-value=1.7e-15 Score=158.67 Aligned_cols=135 Identities=46% Similarity=0.885 Sum_probs=101.3
Q ss_pred ceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCC
Q psy3847 13 EVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKH 92 (664)
Q Consensus 13 ~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~ 92 (664)
..+++++++++. .......+.+.....+..++||.+.+.. ..+. |+|+.|
T Consensus 29 ~~~~fhii~d~~--s~~~~~~l~~~~~~~~~~i~f~~i~~~~------~~~~----------------------~~~~~~ 78 (280)
T cd06431 29 NPLHFHLITDEI--ARRILATLFQTWMVPAVEVSFYNAEELK------SRVS----------------------WIPNKH 78 (280)
T ss_pred CCEEEEEEECCc--CHHHHHHHHHhccccCcEEEEEEhHHhh------hhhc----------------------cCcccc
Confidence 468888877653 5555555555555445568887763211 1111 235567
Q ss_pred ccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCccCccc
Q psy3847 93 YSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGF 172 (664)
Q Consensus 93 ~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~ 172 (664)
+++.++++||++|++||++++||||||||+||++||++||++|.+|++++++|++++.+++|.+.+++..++++..+. +
T Consensus 79 ~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~-y 157 (280)
T cd06431 79 YSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGR-G 157 (280)
T ss_pred hhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCccccc-c
Confidence 777779999999999999999999999999999999999999999999999999999999999888776666665542 5
Q ss_pred cccccc
Q psy3847 173 YLADSV 178 (664)
Q Consensus 173 ~~~~~~ 178 (664)
++++.+
T Consensus 158 FNsGVm 163 (280)
T cd06431 158 FNTGVI 163 (280)
T ss_pred eeeeee
Confidence 556643
No 25
>KOG1879|consensus
Probab=99.43 E-value=3.5e-13 Score=157.15 Aligned_cols=241 Identities=22% Similarity=0.287 Sum_probs=173.7
Q ss_pred CCCCCcceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchh---HHHHHHHhhccCCCceeEEEEecccccc
Q psy3847 7 PVIPTCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVA---LNILQTLFSTWSVPQVEVSFYLADSVVE 83 (664)
Q Consensus 7 ~~~~~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s---~~~l~~l~~~~~~~~~~~~fy~~~~~~~ 83 (664)
++.++.++|+|+-+++|.-|.+.+.+||.|+++|++.|+.|+++-+..| ++.+..+.+.+ ++++.+.+-
T Consensus 1174 ~~~~~~~vINIFSvASGHLYERflrIMm~SvlknTktpVKFWfLkNyLSPtFKe~iP~mA~eY---nFeyElv~Y----- 1245 (1470)
T KOG1879|consen 1174 SMKKDKEVINIFSVASGHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKESIPHMAKEY---NFEYELVQY----- 1245 (1470)
T ss_pred cccCccceEEEEeeccccHHHHHHHHHHHHHHhCCCCceeEEeehhhcChHHHHHHHHHHHHh---CceEEEEEe-----
Confidence 3345667999999999999999999999999999999999999987775 55555555655 566655443
Q ss_pred cccccCCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccc
Q psy3847 84 DVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHK 163 (664)
Q Consensus 84 ~v~~ip~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~ 163 (664)
+| |.++.+ + +++|
T Consensus 1246 --kW---------------------PrWLhq-------------------Q----~EKQ--------------------- 1258 (1470)
T KOG1879|consen 1246 --KW---------------------PRWLHQ-------------------Q----TEKQ--------------------- 1258 (1470)
T ss_pred --cC---------------------chhhhh-------------------h----hhhh---------------------
Confidence 23 322111 0 0000
Q ss_pred cCCccCccccccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEE
Q psy3847 164 PWPALGRGFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGL 243 (664)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~ 243 (664)
+ -+.+|-=|||.-+||-+++||||+|+|-||+.|+.||.+++ .+++..|-
T Consensus 1259 -----------------R----------iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfd---l~GaPygY 1308 (1470)
T KOG1879|consen 1259 -----------------R----------IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFD---LGGAPYGY 1308 (1470)
T ss_pred -----------------h----------hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcc---cCCCcccc
Confidence 1 24578889999999999999999999999999999999998 56766776
Q ss_pred eeccc-----hhh---hccccccCCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHH
Q psy3847 244 VENQS-----DWY---LGKLWKNHKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAI 315 (664)
Q Consensus 244 v~d~~-----~~y---~~~~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v 315 (664)
+|=+. +-| ....|++++. ..+|--|...++||+|+|+..-.++++-.....-+....+.--|||+-|-+
T Consensus 1309 tPfCdsR~EMDGyRFWK~GYW~~hL~---grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm 1385 (1470)
T KOG1879|consen 1309 TPFCDSRREMDGYRFWKQGYWKKHLR---GRKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNM 1385 (1470)
T ss_pred CccccccccccchhHHhhhHHHHHhc---cCccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccc
Confidence 65321 112 2334544432 235999999999999999998888887666553334566788999999999
Q ss_pred HhcCCCeEEEeCCccccccCCCCCChhhhhh-hcCCcEEEEcCCCCCCCccC
Q psy3847 316 ISEHPYLVYTLPCQWNVQLSDNTRSDELCYT-ELTDLKIIHWNSPKKLKVKN 366 (664)
Q Consensus 316 ~~~~p~~v~~Lp~~wN~q~~~~~~~~~~~~~-~~~~~~IIHf~g~~KPW~~~ 366 (664)
.+.-| |+.||..|=++- .-|.. ..+.+++|--+. -||.+.
T Consensus 1386 ~hqVp--IkSLPqeWLWCE-------TWC~d~skkkAktIDLCn--NP~TKE 1426 (1470)
T KOG1879|consen 1386 QHQVP--IKSLPQEWLWCE-------TWCDDESKKKAKTIDLCN--NPLTKE 1426 (1470)
T ss_pred eeecc--cccCCcchhhhh-------hhcCchhhhhchhhhhhc--Cccccc
Confidence 99998 999999998763 12332 245566666554 355543
No 26
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=99.27 E-value=9.2e-12 Score=133.92 Aligned_cols=131 Identities=12% Similarity=0.226 Sum_probs=93.2
Q ss_pred ceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCC
Q psy3847 13 EVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKH 92 (664)
Q Consensus 13 ~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~ 92 (664)
..++++++++| ...+....|+++....+..++++.+..+ .++. . |.+.
T Consensus 54 ~~~~f~Il~~~--is~e~~~~l~~l~~~~~~~i~~~~id~~----~~~~----~----------------------~~~~ 101 (334)
T PRK15171 54 KSLVFHVFTDY--ISDADKQRFSALAKQYNTRINIYLINCE----RLKS----L----------------------PSTK 101 (334)
T ss_pred CCEEEEEEeCC--CCHHHHHHHHHHHHhcCCeEEEEEeCHH----HHhC----C----------------------cccC
Confidence 36888887755 4777778888888776677999998432 1221 1 1123
Q ss_pred ccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccc-hhHHHHhhhhccccCCccCcc
Q psy3847 93 YSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQ-SDWYLGKLWKNHKPWPALGRG 171 (664)
Q Consensus 93 ~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~-~~~y~~~l~~~~~~~~~~~~~ 171 (664)
+++.++|+||++|++||++++||||||||+||++||++||++ ||+++.++|++.+. ..|+.+...+. ..|.++.+
T Consensus 102 ~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~--dl~~~~~aav~~d~~~~~~~~~~~~l--~~~~~~~~ 177 (334)
T PRK15171 102 NWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDL--DFAENEIAAVVAEGDAEWWSKRAQSL--QTPGLASG 177 (334)
T ss_pred cCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhc--cCCCCeEEEEEeccchhHHHHHHHhc--CCcccccc
Confidence 457899999999999999999999999999999999999999 99988888887543 33444322111 22333445
Q ss_pred cccccccc
Q psy3847 172 FYLADSVV 179 (664)
Q Consensus 172 ~~~~~~~~ 179 (664)
+++++++.
T Consensus 178 YFNsGVll 185 (334)
T PRK15171 178 YFNSGFLL 185 (334)
T ss_pred ceecceEE
Confidence 66666543
No 27
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.19 E-value=4e-11 Score=125.98 Aligned_cols=132 Identities=17% Similarity=0.344 Sum_probs=92.2
Q ss_pred cceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCe--EEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccC
Q psy3847 12 CEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPL--HFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIP 89 (664)
Q Consensus 12 ~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l--~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip 89 (664)
...+|+++++.+ .........+.+.-.-....+ ++|.|+-+... ... |
T Consensus 27 ~~~l~Fhi~~d~-~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~------~~~---------------------w-- 76 (304)
T cd06430 27 QKPLRFHIFAED-QLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGN------AAE---------------------W-- 76 (304)
T ss_pred CCCEEEEEEECC-ccCHHHHHHHHHHHHhccceeeeEEEEEecCccc------hhh---------------------h--
Confidence 358899998865 467777777888855444444 77777421110 001 2
Q ss_pred CCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchh----HHHHhhhhccccC
Q psy3847 90 NKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSD----WYLGKLWKNHKPW 165 (664)
Q Consensus 90 ~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~----~y~~~l~~~~~~~ 165 (664)
++.++.++|+||++|++|| +++||||||||+||++||++||++|.+|++.+++|++++... ||. . ++..
T Consensus 77 -s~l~~~~~y~RL~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~-~----~~~~ 149 (304)
T cd06430 77 -KKLFKPCAAQRLFLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYN-R----FARH 149 (304)
T ss_pred -hhcccHHHHHHHHHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhh-h----hccc
Confidence 2334578899999999999 899999999999999999999999999999999999876654 663 1 1223
Q ss_pred CccCccccccccccc
Q psy3847 166 PALGRGFYLADSVVE 180 (664)
Q Consensus 166 ~~~~~~~~~~~~~~~ 180 (664)
|..|...+++++++=
T Consensus 150 ~~~~~~gFNSGVmLm 164 (304)
T cd06430 150 PYYGKTGVNSGVMLM 164 (304)
T ss_pred Ccccccccccceeee
Confidence 333433466666543
No 28
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.06 E-value=2.2e-10 Score=118.69 Aligned_cols=111 Identities=22% Similarity=0.279 Sum_probs=75.9
Q ss_pred ceEEEEEEEeCCCchHHHHHHHHHHHhhC---CCCeEEEEEeCchhHH-----HHHHHhhccCCCceeEEEEeccccccc
Q psy3847 13 EVIQVAIVCAGYNSTRSLVTLIKSILFYR---KNPLHFHLITDTVALN-----ILQTLFSTWSVPQVEVSFYLADSVVED 84 (664)
Q Consensus 13 ~~ihI~~v~~g~~~~~~~~~~ikSil~~~---~~~l~fhii~d~~s~~-----~l~~l~~~~~~~~~~~~fy~~~~~~~~ 84 (664)
..+++++++++.+ ...++++.... +..++|+.+.+...+. .++++.+.. .....
T Consensus 28 ~~~~fhvvtd~~s-----~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~----------~~~~~--- 89 (257)
T cd06429 28 SNLVFHIVTDNQN-----YGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQLESEA----------DTSNL--- 89 (257)
T ss_pred CceEEEEecCccC-----HHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhhhccc----------ccccc---
Confidence 6788888887643 25566665544 3457777776442111 111211110 00000
Q ss_pred ccccCCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccc
Q psy3847 85 VSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGL 146 (664)
Q Consensus 85 v~~ip~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~ 146 (664)
=-|++++++.++|+||++|++|| +++||||||||+||++||++||++ ||+++.++|+
T Consensus 90 --~~~~~~~~s~~~y~Rl~ip~llp-~~~kvlYLD~Dviv~~dl~eL~~~--dl~~~~~aav 146 (257)
T cd06429 90 --KQRKPEYISLLNFARFYLPELFP-KLEKVIYLDDDVVVQKDLTELWNT--DLGGGVAGAV 146 (257)
T ss_pred --ccCCccccCHHHHHHHHHHHHhh-hhCeEEEEeCCEEEeCCHHHHhhC--CCCCCEEEEE
Confidence 12567889999999999999999 699999999999999999999999 9998755444
No 29
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=98.96 E-value=1.4e-09 Score=112.17 Aligned_cols=106 Identities=16% Similarity=0.258 Sum_probs=73.9
Q ss_pred eEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCc
Q psy3847 14 VIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHY 93 (664)
Q Consensus 14 ~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~ 93 (664)
.++++++..+. ..+....|+++..-.+..+.|+-+...... .+. + . .++
T Consensus 30 ~~~~~il~~~i--s~~~~~~L~~~~~~~~~~i~~~~~~~~~~~-~~~-----~-------------------~----~~~ 78 (246)
T cd00505 30 PLRFHVLTNPL--SDTFKAALDNLRKLYNFNYELIPVDILDSV-DSE-----H-------------------L----KRP 78 (246)
T ss_pred CeEEEEEEccc--cHHHHHHHHHHHhccCceEEEEeccccCcc-hhh-----h-------------------h----cCc
Confidence 78888887653 566677777776644445666655321110 000 0 0 123
Q ss_pred cchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHH
Q psy3847 94 SGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWY 154 (664)
Q Consensus 94 ~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y 154 (664)
.+.++++||++|++|| +++||||||||+||++||.+||++ ++++. .+|++++....+
T Consensus 79 ~~~~~y~RL~i~~llp-~~~kvlYLD~D~iv~~di~~L~~~--~l~~~-~~aav~d~~~~~ 135 (246)
T cd00505 79 IKIVTLTKLHLPNLVP-DYDKILYVDADILVLTDIDELWDT--PLGGQ-ELAAAPDPGDRR 135 (246)
T ss_pred cccceeHHHHHHHHhh-ccCeEEEEcCCeeeccCHHHHhhc--cCCCC-eEEEccCchhhh
Confidence 4678999999999999 899999999999999999999999 88664 566666554443
No 30
>PLN02523 galacturonosyltransferase
Probab=98.88 E-value=3.7e-09 Score=117.09 Aligned_cols=57 Identities=30% Similarity=0.622 Sum_probs=50.0
Q ss_pred CCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccc
Q psy3847 90 NKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQ 150 (664)
Q Consensus 90 ~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~ 150 (664)
+..|.+.++++|+++|++|| +++||||||||+||++||.+||++ ||+++ ++|++++.
T Consensus 356 ~p~ylS~~ny~Rf~IPeLLP-~ldKVLYLD~DVVVq~DLseLw~i--DL~gk-v~aAVeDc 412 (559)
T PLN02523 356 NPKYLSMLNHLRFYLPEMYP-KLHRILFLDDDVVVQKDLTGLWKI--DMDGK-VNGAVETC 412 (559)
T ss_pred CcchhhHHHHHHHHHHHHhc-ccCeEEEEeCCEEecCCHHHHHhC--cCCCc-eEEEehhh
Confidence 45789999999999999999 599999999999999999999999 99976 45555543
No 31
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=98.81 E-value=6.9e-09 Score=107.25 Aligned_cols=101 Identities=15% Similarity=0.159 Sum_probs=73.9
Q ss_pred ceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCC
Q psy3847 13 EVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKH 92 (664)
Q Consensus 13 ~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~ 92 (664)
..+|++++.++. ..+....+.++....+..++|+.+.... .+...... +
T Consensus 29 ~~~~fyil~~~i--s~e~~~~l~~~~~~~~~~i~~i~i~~~~---~~~~~~~~--------------------------~ 77 (248)
T cd06432 29 SPVKFWFIKNFL--SPQFKEFLPEMAKEYGFEYELVTYKWPR---WLHKQTEK--------------------------Q 77 (248)
T ss_pred CCEEEEEEeCCC--CHHHHHHHHHHHHHhCCceEEEEecChh---hhhccccc--------------------------c
Confidence 478999988654 7777788888887777778888773222 11110000 0
Q ss_pred ccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccc
Q psy3847 93 YSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVE 148 (664)
Q Consensus 93 ~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~ 148 (664)
+ ..+++.||+++++||++++||||||||+||++||++||++ ||++. ++|+++
T Consensus 78 ~-~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~--dl~~~-~~Aav~ 129 (248)
T cd06432 78 R-IIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDM--DLKGA-PYGYTP 129 (248)
T ss_pred h-hHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhc--CcCCC-eEEEee
Confidence 0 1356888999999999999999999999999999999999 99976 555543
No 32
>PLN02870 Probable galacturonosyltransferase
Probab=98.76 E-value=3.8e-09 Score=116.61 Aligned_cols=56 Identities=27% Similarity=0.584 Sum_probs=50.1
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhcccccccccc
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLV 147 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~ 147 (664)
.+..|.+..+++||++|++|| +++||||||||+||++||++||++ ||+++.++|+.
T Consensus 321 ~~p~ylS~lny~Rl~LPelLP-~LdKVLYLD~DVVVqgDLseLw~i--DL~gkviaAVe 376 (533)
T PLN02870 321 RSPKYISLLNHLRIYLPELFP-NLDKVVFLDDDVVIQRDLSPLWDI--DLGGKVNGAVE 376 (533)
T ss_pred CCccccCHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCcHHHHhhC--CCCCceEEEEc
Confidence 367889999999999999999 799999999999999999999999 99976544443
No 33
>PLN02659 Probable galacturonosyltransferase
Probab=98.75 E-value=3e-09 Score=117.44 Aligned_cols=57 Identities=30% Similarity=0.706 Sum_probs=50.6
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhcccccccccccc
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVEN 149 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~ 149 (664)
.+..|.++.+++||++|++|| +++||||||||+||++||++||++ ||+++.+ |++++
T Consensus 322 ~~p~ylS~~nY~RL~IPeLLP-~LdKVLYLD~DVVVqgDLseLw~i--DL~gkv~-AAVeD 378 (534)
T PLN02659 322 LSPKYNSVMNHIRIHLPELFP-SLNKVVFLDDDIVVQTDLSPLWDI--DMNGKVN-GAVET 378 (534)
T ss_pred CCccceeHHHHHHHHHHHHhh-hcCeEEEeeCCEEEcCchHHHHhC--CCCCcEE-EEeec
Confidence 367899999999999999999 699999999999999999999999 9998654 44443
No 34
>PLN02742 Probable galacturonosyltransferase
Probab=98.74 E-value=4.2e-09 Score=116.51 Aligned_cols=58 Identities=29% Similarity=0.576 Sum_probs=51.7
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccc
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQ 150 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~ 150 (664)
.+.+|++.++++|+++|++|| +++||||||||+||++||++||++ ||++ +++|++++.
T Consensus 331 r~p~y~s~~~y~R~~lP~llp-~l~KvlYLD~DvVV~~DL~eL~~~--DL~~-~viaAVedC 388 (534)
T PLN02742 331 RNPKYLSMLNHLRFYIPEIYP-ALEKVVFLDDDVVVQKDLTPLFSI--DLHG-NVNGAVETC 388 (534)
T ss_pred cCcccccHHHHHHHHHHHHhh-ccCeEEEEeCCEEecCChHHHhcC--CCCC-CEEEEeCch
Confidence 367999999999999999999 599999999999999999999999 9995 566666654
No 35
>PLN02718 Probable galacturonosyltransferase
Probab=98.72 E-value=1.7e-08 Score=113.22 Aligned_cols=55 Identities=29% Similarity=0.687 Sum_probs=48.6
Q ss_pred CccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccc
Q psy3847 92 HYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQ 150 (664)
Q Consensus 92 ~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~ 150 (664)
.|.+.++|+||++|++|| +++||||||||+||++||++||++ ||+++ ++|++++.
T Consensus 399 ~~~S~~~y~Rl~ipellp-~l~KvLYLD~DvVV~~DL~eL~~i--Dl~~~-v~aaVedC 453 (603)
T PLN02718 399 RYISALNHARFYLPDIFP-GLNKIVLFDHDVVVQRDLSRLWSL--DMKGK-VVGAVETC 453 (603)
T ss_pred ccccHHHHHHHHHHHHhc-ccCEEEEEECCEEecCCHHHHhcC--CCCCc-EEEEeccc
Confidence 578899999999999999 499999999999999999999999 99975 55555543
No 36
>PLN02867 Probable galacturonosyltransferase
Probab=98.72 E-value=3.8e-09 Score=117.05 Aligned_cols=57 Identities=26% Similarity=0.572 Sum_probs=52.5
Q ss_pred CCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhcccccccccccc
Q psy3847 90 NKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVEN 149 (664)
Q Consensus 90 ~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~ 149 (664)
+..|.++.+|+|+++|++|| +++||||||+|+||++||++||++ ||+++.++|+.++
T Consensus 324 ~pkylS~lnYlRflIPeLLP-~LdKVLYLD~DVVVqgDLseLwdi--DL~gkviaAV~D~ 380 (535)
T PLN02867 324 SPSCLSLLNHLRIYIPELFP-DLNKIVFLDDDVVVQHDLSSLWEL--DLNGKVVGAVVDS 380 (535)
T ss_pred ChhhhhHHHHHHHHHHHHhh-ccCeEEEecCCEEEcCchHHHHhC--cCCCCeEEEEecc
Confidence 56889999999999999999 699999999999999999999999 9999887777653
No 37
>PLN02829 Probable galacturonosyltransferase
Probab=98.69 E-value=6.3e-09 Score=116.35 Aligned_cols=55 Identities=27% Similarity=0.631 Sum_probs=49.6
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccc
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGL 146 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~ 146 (664)
.+.+|.+.++|+|++||++|| +++||||||||+||++||++||++ ||+++.++|+
T Consensus 435 r~p~ylS~lnY~RfyLPeLLP-~LdKVLYLD~DVVVqgDLseLw~i--DL~gkviAAV 489 (639)
T PLN02829 435 RNPKYLSILNHLRFYLPEIFP-KLNKVLFLDDDIVVQKDLTGLWSI--DLKGNVNGAV 489 (639)
T ss_pred CCcchhhHHHHHHHHHHHHhc-ccCeEEEEeCCEEeCCChHHHHhC--CCCCceEEEe
Confidence 367889999999999999999 699999999999999999999999 9997655444
No 38
>PLN02769 Probable galacturonosyltransferase
Probab=98.68 E-value=6.4e-09 Score=117.02 Aligned_cols=56 Identities=29% Similarity=0.545 Sum_probs=50.1
Q ss_pred CCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhcccccccccccc
Q psy3847 90 NKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVEN 149 (664)
Q Consensus 90 ~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~ 149 (664)
+.+|++.++++|++||++|| +++||||||||+||++||++||++ ||+++.++| +++
T Consensus 431 ~~eyiS~~nh~RfyIPELLP-~LdKVLYLD~DVVVqgDLseLw~i--DL~gkviAA-Ved 486 (629)
T PLN02769 431 RTEYLSVFSHSHFLLPEIFK-KLKKVVVLDDDVVVQRDLSFLWNL--DMGGKVNGA-VQF 486 (629)
T ss_pred CcccccHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCcHHHHhcC--CCCCCeEEE-ehh
Confidence 56899999999999999999 699999999999999999999999 999865444 543
No 39
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=98.65 E-value=6.6e-08 Score=99.61 Aligned_cols=104 Identities=17% Similarity=0.275 Sum_probs=76.9
Q ss_pred ceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCC
Q psy3847 13 EVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKH 92 (664)
Q Consensus 13 ~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~ 92 (664)
+.++|++++.| ........|+++.......+.|+-+.... +..... ...
T Consensus 29 ~~~~~~il~~~--is~~~~~~L~~~~~~~~~~i~~~~i~~~~----~~~~~~-------------------------~~~ 77 (248)
T cd04194 29 RDYDFYILNDD--ISEENKKKLKELLKKYNSSIEFIKIDNDD----FKFFPA-------------------------TTD 77 (248)
T ss_pred CceEEEEEeCC--CCHHHHHHHHHHHHhcCCeEEEEEcCHHH----HhcCCc-------------------------ccc
Confidence 47899988765 47777888999988766678888774321 111100 012
Q ss_pred ccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccch
Q psy3847 93 YSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQS 151 (664)
Q Consensus 93 ~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~ 151 (664)
+.+..+++||++|+++| +++||||||||++|++||.+||+. ++++ ..+|++++..
T Consensus 78 ~~~~~~y~rl~l~~ll~-~~~rvlylD~D~lv~~di~~L~~~--~~~~-~~~aa~~d~~ 132 (248)
T cd04194 78 HISYATYYRLLIPDLLP-DYDKVLYLDADIIVLGDLSELFDI--DLGD-NLLAAVRDPF 132 (248)
T ss_pred cccHHHHHHHHHHHHhc-ccCEEEEEeCCEEecCCHHHHhcC--CcCC-CEEEEEeccc
Confidence 34678999999999999 899999999999999999999998 8855 4555555443
No 40
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=98.58 E-value=2.1e-08 Score=112.07 Aligned_cols=56 Identities=32% Similarity=0.673 Sum_probs=49.9
Q ss_pred CCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhcccccccccccc
Q psy3847 90 NKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVEN 149 (664)
Q Consensus 90 ~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~ 149 (664)
+.+|.+.++|+|+++|++|| +++||||||||+||++||++||++ ||+++.+ |++++
T Consensus 454 ~p~ylS~lnY~Rf~LPelLp-~l~KVLYLD~DVVV~gDLseLw~i--DL~g~v~-AAVed 509 (657)
T PLN02910 454 NPKYLSMLNHLRFYLPEVYP-KLEKILFLDDDIVVQKDLTPLWSI--DMQGMVN-GAVET 509 (657)
T ss_pred CcchhhHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCchHHHHhC--CcCCceE-EEecc
Confidence 56889999999999999999 699999999999999999999999 9998654 44443
No 41
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=98.39 E-value=8.2e-07 Score=94.66 Aligned_cols=109 Identities=17% Similarity=0.224 Sum_probs=81.6
Q ss_pred eEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCc
Q psy3847 14 VIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHY 93 (664)
Q Consensus 14 ~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~ 93 (664)
.+.++++++|. .++-...|.-+++-.+..+.+..+..+. ++. + .|.+.+
T Consensus 32 ~~~fhil~~~i--~~e~~~~l~~~~~~f~~~i~~~~id~~~----~~~----~---------------------~~~~~~ 80 (325)
T COG1442 32 FYKFHILVDGL--NEEDKKKLNETAEPFKSFIVLEVIDIEP----FLD----Y---------------------PPFTKR 80 (325)
T ss_pred cEEEEEEecCC--CHHHHHHHHHHHHhhccceeeEEEechh----hhc----c---------------------cccccc
Confidence 34455555554 7778888888888888888888773221 111 1 112334
Q ss_pred cchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHH
Q psy3847 94 SGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLG 156 (664)
Q Consensus 94 ~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~ 156 (664)
.+.++|+|+++++++|+. +|+||||+|+||.+||++||.. +++++.++|+.+..+.+..+
T Consensus 81 ~s~~v~~R~fiadlf~~~-dK~lylD~Dvi~~g~l~~lf~~--~~~~~~~aaV~D~~~~~~~~ 140 (325)
T COG1442 81 FSKMVLVRYFLADLFPQY-DKMLYLDVDVIFCGDLSELFFI--DLEEYYLAAVRDVFSHYMKE 140 (325)
T ss_pred hHHHHHHHHHHHHhcccc-CeEEEEecCEEEcCcHHHHHhc--CCCcceEEEEeehhhhhhhh
Confidence 558999999999999998 9999999999999999999999 99977777776666666554
No 42
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=98.01 E-value=8.6e-06 Score=82.80 Aligned_cols=129 Identities=22% Similarity=0.290 Sum_probs=86.9
Q ss_pred EEEEEEeCCCchHHHHHHHHHHHhhCC--CCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccc--cccccccCCC
Q psy3847 16 QVAIVCAGYNSTRSLVTLIKSILFYRK--NPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSV--VEDVSWIPNK 91 (664)
Q Consensus 16 hI~~v~~g~~~~~~~~~~ikSil~~~~--~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~--~~~v~~ip~~ 91 (664)
||+++++ .+|..++.++++|++.+++ ..++||+++++.+.+.++.+.+....-.....++..+.. ..........
T Consensus 1 ~i~~~~d-~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (250)
T PF01501_consen 1 HIVLACD-DNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSK 79 (250)
T ss_dssp -EEEECS-GGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCC
T ss_pred CEEEEeC-HHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhccccc
Confidence 6888664 5999999999999999999 569999999988877776664332211111112222211 1112344567
Q ss_pred CccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhcccccccccccc
Q psy3847 92 HYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVEN 149 (664)
Q Consensus 92 ~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~ 149 (664)
.+.+..+++||+++++| .+++||||||+|++|.+||.+||+. ++++.. +|++++
T Consensus 80 ~~~~~~~~~rl~i~~ll-~~~drilyLD~D~lv~~dl~~lf~~--~~~~~~-~~a~~~ 133 (250)
T PF01501_consen 80 RHFSPATFARLFIPDLL-PDYDRILYLDADTLVLGDLDELFDL--DLQGKY-LAAVED 133 (250)
T ss_dssp TCGGGGGGGGGGHHHHS-TTSSEEEEE-TTEEESS-SHHHHC-----TTSS-EEEEE-
T ss_pred ccccHHHHHHhhhHHHH-hhcCeEEEEcCCeeeecChhhhhcc--cchhhh-cccccc
Confidence 88999999999999999 5689999999999999999999998 778544 444443
No 43
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=97.81 E-value=1.4e-05 Score=82.42 Aligned_cols=151 Identities=19% Similarity=0.183 Sum_probs=85.4
Q ss_pred CCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccch-------------h-----
Q psy3847 189 HYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSD-------------W----- 250 (664)
Q Consensus 189 hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~-------------~----- 250 (664)
.|+-...+.||.+-+.- ++|||||||+|.|++.++++||+.. -+-+++.+|... |
T Consensus 150 ~~rw~~mftKLrVfeqt--EyDRvifLDsDaivlknmDklFd~P-----vyef~a~pD~~~sp~~fhrp~~~i~~~ft~~ 222 (368)
T COG5597 150 FHRWLDMFTKLRVFEQT--EYDRVIFLDSDAIVLKNMDKLFDYP-----VYEFAAAPDVYESPADFHRPNSGIFVSFTPA 222 (368)
T ss_pred cCcHHHHhHHHHhhhhh--hhceEEEeccchHHhhhhHHHhcch-----hhhhccCCchhhCHHHhcCCCCccceeecHH
Confidence 33345667788777765 7999999999999999999999843 111222222110 0
Q ss_pred -----------hhcc-cccc------CCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHH
Q psy3847 251 -----------YLGK-LWKN------HKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIF 312 (664)
Q Consensus 251 -----------y~~~-~~~~------~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiL 312 (664)
|... .|.+ +.--|..+.+||||.|+++..++.=..+. .++--.+ .....+-.|.++
T Consensus 223 faayg~~r~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv----~~alPkl--ydda~mmeqsll 296 (368)
T COG5597 223 FAAYGKMRAALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIV----WFALPKL--YDDADMMEQSLL 296 (368)
T ss_pred HHhhcccHhhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHH----HHhhHHh--hhhhhHHHHHHH
Confidence 1000 0000 01113345699999999999986433221 1221110 111223357888
Q ss_pred HHHHhcC---CCeEEEeCCccccccCCCCCChhhhhhhcCCcEEEEcCCCCCCCccC
Q psy3847 313 NAIISEH---PYLVYTLPCQWNVQLSDNTRSDELCYTELTDLKIIHWNSPKKLKVKN 366 (664)
Q Consensus 313 N~v~~~~---p~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~ 366 (664)
|...+.. | +..++.+|| |..+.. ....-.+.+|+ |||.-.
T Consensus 297 nlaYn~~g~FP--werld~~yN---G~wa~~-----ndlPylka~Hg----K~W~y~ 339 (368)
T COG5597 297 NLAYNYEGFFP--WERLDPRYN---GYWADA-----NDLPYLKAWHG----KPWFYT 339 (368)
T ss_pred HHHHhhhccCc--hhhcCcccc---cccccc-----cccchHHHhhc----CcCCCC
Confidence 8775543 4 678888888 443332 11223466777 999754
No 44
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.29 E-value=0.0016 Score=65.40 Aligned_cols=127 Identities=20% Similarity=0.154 Sum_probs=72.5
Q ss_pred eEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhccccccCCCCCCCCCceeEEEEEEechhHHhhchhHHH
Q psy3847 211 KTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFNTGVILLDLTKLRDISWAGFW 290 (664)
Q Consensus 211 kvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~ 290 (664)
-|+++|+|+++.+|+.++++. .+..++ +..|... .......+..+|+|+|.+.-+. +-..+-+.|
T Consensus 68 ~vl~~D~Dvv~~~dp~~~~~~----~~~Di~-~~~d~~~---------~~~~~~~~~~~n~G~~~~r~t~-~~~~~~~~w 132 (212)
T PF03407_consen 68 DVLFSDADVVWLRDPLPYFEN----PDADIL-FSSDGWD---------GTNSDRNGNLVNTGFYYFRPTP-RTIAFLEDW 132 (212)
T ss_pred ceEEecCCEEEecCcHHhhcc----CCCceE-EecCCCc---------ccchhhcCCccccceEEEecCH-HHHHHHHHH
Confidence 499999999999999999711 222223 2223211 0111122345799999997765 222333444
Q ss_pred HHHHHHHhhhcCCCCCCChHHHHHHHhc-----CCCeEEEeCCccccccCCCC-C--ChhhhhhhcCCcEEEEcCCC
Q psy3847 291 RIIAEKFLLTRLWTSLADQDIFNAIISE-----HPYLVYTLPCQWNVQLSDNT-R--SDELCYTELTDLKIIHWNSP 359 (664)
Q Consensus 291 ~~~~~~~l~~~~~~~~~DQDiLN~v~~~-----~p~~v~~Lp~~wN~q~~~~~-~--~~~~~~~~~~~~~IIHf~g~ 359 (664)
.+...+ .....||.++|.++.+ ..-.+..||...-.....+. . ....... ..+|.|||.++.
T Consensus 133 ~~~~~~------~~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~-~~~p~~vH~n~~ 202 (212)
T PF03407_consen 133 LERMAE------SPGCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRDWAWVPT-KNKPYIVHANCC 202 (212)
T ss_pred HHHHHh------CCCcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecchhhhhcc-ccccceEEEcCC
Confidence 443332 1234599999999998 35557888876542211110 0 0011111 368999999875
No 45
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=97.10 E-value=0.0028 Score=66.72 Aligned_cols=61 Identities=21% Similarity=0.385 Sum_probs=49.4
Q ss_pred CCCCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEcceee
Q psy3847 543 GNFYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFET 606 (664)
Q Consensus 543 ~~~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE~ 606 (664)
+..++.-..||+|...|++++++++|+|++|++++.+.+.+....+. .....++++|..-.
T Consensus 71 ~~~f~~a~arN~g~~~A~~d~l~flD~D~i~~~~~i~~~~~~~~~l~---~~~~~~~~~p~~yl 131 (281)
T PF10111_consen 71 GEPFSRAKARNIGAKYARGDYLIFLDADCIPSPDFIEKLLNHVKKLD---KNPNAFLVYPCLYL 131 (281)
T ss_pred CCCcCHHHHHHHHHHHcCCCEEEEEcCCeeeCHHHHHHHHHHHHHHh---cCCCceEEEeeeec
Confidence 46799999999999999999999999999999999999988444433 24556777786443
No 46
>KOG3765|consensus
Probab=96.66 E-value=0.0014 Score=71.85 Aligned_cols=66 Identities=21% Similarity=0.391 Sum_probs=50.2
Q ss_pred CCcEEEEEeeChhhHHHHHHHhhccCCcEEEEEEeCchh------HHH-HHHHHhccccccccccEEEEEEeec
Q psy3847 476 GNDVTLVAQLSMDRLQMVEMLFKHWEGPISLTLYMSDAE------AQQ-FLSYAGNSEALRSRRNIGYHVVYKE 542 (664)
Q Consensus 476 ~~dVTLvTq~s~drL~~l~~l~~~W~GPiS~av~~~~~e------~~~-~~~~~~~~~~~~~r~~v~~h~v~~~ 542 (664)
..+|||.||++.+.+..++.++.+|+||+|.++|++..+ +++ .+..+..+. ...+..+++|++++.
T Consensus 62 ~~~v~La~h~~~~~~~~~~~~~~~W~~Pls~~lf~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~H~~f~~ 134 (386)
T KOG3765|consen 62 LENVTLATHTESDYLDNLEPKATRWRGPLSFALFALPLDFHSNSALEQRYLAKVHECD-DLFLKKVTVHFLFRV 134 (386)
T ss_pred cCceeeecccccchhhccccccccCCCCceeEEeecccCCCchhHHHHHHHHhcCcch-HhhhhheeeEEEecc
Confidence 679999999999999999999999999999999995432 221 233333333 235557999999874
No 47
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=96.41 E-value=0.0017 Score=66.81 Aligned_cols=109 Identities=15% Similarity=0.033 Sum_probs=73.4
Q ss_pred EEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeC-chhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCccc
Q psy3847 17 VAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITD-TVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYSG 95 (664)
Q Consensus 17 I~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d-~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~~ 95 (664)
.+.++++++|..++.++++||+.+++. .+++++.+ +++.+..+.+-+.. . .+..++................
T Consensus 3 y~t~~~~~~Y~~~a~vl~~SL~~~~~~-~~~~vl~~~~is~~~~~~L~~~~----~--~~~~v~~i~~~~~~~~~~~~~~ 75 (240)
T cd02537 3 YVTLLTNDDYLPGALVLGYSLRKVGSS-YDLVVLVTPGVSEESREALEEVG----W--IVREVEPIDPPDSANLLKRPRF 75 (240)
T ss_pred EEEEecChhHHHHHHHHHHHHHhcCCC-CCEEEEECCCCCHHHHHHHHHcC----C--EEEecCccCCcchhhhccchHH
Confidence 455667779999999999999999765 56666554 46655544443321 2 2233332111000001123455
Q ss_pred hhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHH
Q psy3847 96 VYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWAL 134 (664)
Q Consensus 96 ~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~ 134 (664)
..++.||+++++. .++||||||+|++|.+||.+||+.
T Consensus 76 ~~~~~kl~~~~l~--~~drvlylD~D~~v~~~i~~Lf~~ 112 (240)
T cd02537 76 KDTYTKLRLWNLT--EYDKVVFLDADTLVLRNIDELFDL 112 (240)
T ss_pred HHHhHHHHhcccc--ccceEEEEeCCeeEccCHHHHhCC
Confidence 7889999999975 489999999999999999999986
No 48
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=95.97 E-value=0.0035 Score=64.67 Aligned_cols=141 Identities=18% Similarity=0.168 Sum_probs=12.1
Q ss_pred ccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEE-Eeeccc--hh--hhc---cccc-c-CCCCCCCCCceeEEEEE
Q psy3847 206 PETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIG-LVENQS--DW--YLG---KLWK-N-HKPWPALGRGFNTGVIL 275 (664)
Q Consensus 206 p~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a-~v~d~~--~~--y~~---~~~~-~-~~~~p~~~~yfNSGVmL 275 (664)
| +.+-|+|||+|++|...=-.|-+.. ++...+-. +..|.. ++ +.+ .... . .........|+|+|+++
T Consensus 75 P-~~~wv~~lD~Dali~n~~~~L~~~i--l~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~t~d~~gLNtGsFl 151 (239)
T PF05637_consen 75 P-EAEWVWWLDSDALIMNPDFSLEEHI--LSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLIITQDWNGLNTGSFL 151 (239)
T ss_dssp T-T-SEEEEE-TTEEE----------------------------------------------------------------
T ss_pred C-CCCEEEEEcCCeEEEeccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5 7899999999999986544443322 11111000 001100 00 000 0000 0 01111223699999999
Q ss_pred EechhHHhhchhHHHHHHHHHHhhhcC---CCCCCChHHHHHHHhcCCCe---EEEeCCcc-ccccCCCCCChhhhhhhc
Q psy3847 276 LDLTKLRDISWAGFWRIIAEKFLLTRL---WTSLADQDIFNAIISEHPYL---VYTLPCQW-NVQLSDNTRSDELCYTEL 348 (664)
Q Consensus 276 inL~~~R~~~~~~~~~~~~~~~l~~~~---~~~~~DQDiLN~v~~~~p~~---v~~Lp~~w-N~q~~~~~~~~~~~~~~~ 348 (664)
+--..|-+ .+++.......... ....+||++|-.++..+|+. +..+|.++ |-.... .......
T Consensus 152 iRns~ws~-----~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~nsy~~~-----~~~~~~~ 221 (239)
T PF05637_consen 152 IRNSPWSR-----DFLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNSYPED-----ECNYQYK 221 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccc
Confidence 96665543 33333222211111 13478999999999888754 34556443 211100 1112334
Q ss_pred CCcEEEEcCCC
Q psy3847 349 TDLKIIHWNSP 359 (664)
Q Consensus 349 ~~~~IIHf~g~ 359 (664)
+..-|+||.|=
T Consensus 222 ~GDfvvhfaGC 232 (239)
T PF05637_consen 222 EGDFVVHFAGC 232 (239)
T ss_dssp -----------
T ss_pred ccccccccccc
Confidence 56788888884
No 49
>PLN00176 galactinol synthase
Probab=95.93 E-value=0.0045 Score=66.60 Aligned_cols=119 Identities=18% Similarity=0.178 Sum_probs=72.1
Q ss_pred EEEEEEeCCCchHHHHHHHHHHHhhCCC-CeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccc--cccccCCCC
Q psy3847 16 QVAIVCAGYNSTRSLVTLIKSILFYRKN-PLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVE--DVSWIPNKH 92 (664)
Q Consensus 16 hI~~v~~g~~~~~~~~~~ikSil~~~~~-~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~--~v~~ip~~~ 92 (664)
=|.+++++.+|+.++.++.+||...... ++.+ +++++++.+..+.|-+. +. .+.+++.... ....+....
T Consensus 25 yVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVv-lVt~dVp~e~r~~L~~~----g~--~V~~V~~i~~~~~~~~~~~~~ 97 (333)
T PLN00176 25 YVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVV-AVLPDVPEEHRRILVSQ----GC--IVREIEPVYPPENQTQFAMAY 97 (333)
T ss_pred EEEEEecCcchHHHHHHHHHHHHHhCCCCCEEE-EECCCCCHHHHHHHHHc----CC--EEEEecccCCcccccccccch
Confidence 3444455678999999999999877433 3433 34466776654443222 22 2233332210 000011111
Q ss_pred ccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhcccccccccccc
Q psy3847 93 YSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVEN 149 (664)
Q Consensus 93 ~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~ 149 (664)
-...+.||.+.++. ..+||||||||+||.+||.+||+. .++.++|+++.
T Consensus 98 --~~i~~tKl~iw~l~--~ydkvlyLDaD~lv~~nid~Lf~~----~~~~~aAV~dc 146 (333)
T PLN00176 98 --YVINYSKLRIWEFV--EYSKMIYLDGDIQVFENIDHLFDL----PDGYFYAVMDC 146 (333)
T ss_pred --hhhhhhhhhhcccc--ccceEEEecCCEEeecChHHHhcC----CCcceEEEecc
Confidence 12346689988875 589999999999999999999986 33455566543
No 50
>KOG1879|consensus
Probab=94.44 E-value=0.022 Score=68.87 Aligned_cols=55 Identities=22% Similarity=0.364 Sum_probs=45.0
Q ss_pred hhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccc--cccccccc---cchhH
Q psy3847 97 YGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQ--RQTIGLVE---NQSDW 153 (664)
Q Consensus 97 ~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~--~~~~~~~~---~~~~~ 153 (664)
.||==||+.-++|-+|+||||+|.|-||++|+.||.+. |++| +.-..+|+ ++.+.
T Consensus 1262 WgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~df--dl~GaPygYtPfCdsR~EMDGy 1321 (1470)
T KOG1879|consen 1262 WGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDF--DLGGAPYGYTPFCDSRREMDGY 1321 (1470)
T ss_pred hhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhc--ccCCCccccCccccccccccch
Confidence 35556788889999999999999999999999999999 8888 55555663 55544
No 51
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=94.38 E-value=0.021 Score=60.10 Aligned_cols=105 Identities=15% Similarity=0.141 Sum_probs=63.7
Q ss_pred EeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHH---HhhccCCCceeEEEEecccccccccccCCCCccchh
Q psy3847 21 CAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQT---LFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYSGVY 97 (664)
Q Consensus 21 ~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~---l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~~~~ 97 (664)
+.+..|...+.++.+||-...+..=.+-++++..+...... ...... ...+....++..... .....++.
T Consensus 7 ~Tn~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~--~~~~~v~~v~~~~~~----~~~~~~~~- 79 (278)
T cd06914 7 ATNADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLA--RDKVIVKLIPVIIAS----GGDAYWAK- 79 (278)
T ss_pred ecChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhh--ccCcEEEEcCcccCC----CCCccHHH-
Confidence 34668999999999999877664333334444443222111 110001 112222333321100 01223333
Q ss_pred hhhhhccCCcCccccCeEEEEecceeecccHHHHHHH
Q psy3847 98 GLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWAL 134 (664)
Q Consensus 98 ~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~ 134 (664)
++.||.+.++ ...+||||||+|++|.++|.+||..
T Consensus 80 ~~tKl~~~~l--~~y~kvlyLDaD~l~~~~ideLf~~ 114 (278)
T cd06914 80 SLTKLRAFNQ--TEYDRIIYFDSDSIIRHPMDELFFL 114 (278)
T ss_pred HHHHHHhccc--cceeeEEEecCChhhhcChHHHhcC
Confidence 4999999999 4699999999999999999999987
No 52
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=94.02 E-value=0.045 Score=56.20 Aligned_cols=60 Identities=17% Similarity=0.206 Sum_probs=44.7
Q ss_pred hhHHHHHhhcCC----CCeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEcceeeccc
Q psy3847 549 NTLRNVALNQVS----TPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFETQRY 609 (664)
Q Consensus 549 N~LRNvA~~~a~----T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE~~~~ 609 (664)
-..||.|...+- |++|+.+|||.+-|.+-..+++..+....+. ..-.+-+|+|+.-....
T Consensus 79 ~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~-tnI~a~~vlPV~~LNk~ 142 (346)
T COG4092 79 TICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMR-TNIDAPLVLPVYHLNKA 142 (346)
T ss_pred hhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHH-hccCcceeeeeeecchh
Confidence 668888888776 9999999999999977667776665543332 23456789999887654
No 53
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=92.17 E-value=0.41 Score=50.34 Aligned_cols=104 Identities=19% Similarity=0.273 Sum_probs=63.4
Q ss_pred EEEEEeCCCchHHHHHHHHHHHhh-CCCCeEEEEEe-CchhHHHHHHHhhccCCCceeEEEEecccccc--cccc-cCCC
Q psy3847 17 VAIVCAGYNSTRSLVTLIKSILFY-RKNPLHFHLIT-DTVALNILQTLFSTWSVPQVEVSFYLADSVVE--DVSW-IPNK 91 (664)
Q Consensus 17 I~~v~~g~~~~~~~~~~ikSil~~-~~~~l~fhii~-d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~--~v~~-ip~~ 91 (664)
|++++ |..+...+..+|+.|-.. ++-||.+..-. ++.+.+..++++. ..++.++++..... .... +..+
T Consensus 4 IVi~~-g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~-----~q~v~~vd~~~~~~~~~~~~~~~~~ 77 (271)
T PF11051_consen 4 IVITA-GDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLP-----DQDVWFVDASCVIDPDYLGKSFSKK 77 (271)
T ss_pred EEEEe-cCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhh-----hhhhheecceEEeeccccccccccC
Confidence 45544 447888888999888662 34467776665 4456665555554 23445556554321 1110 1100
Q ss_pred Cccchhhh-hhhccCCcCccccCeEEEEecceeecccHHHHHHH
Q psy3847 92 HYSGVYGL-LKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWAL 134 (664)
Q Consensus 92 ~~~~~~~~-~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~ 134 (664)
++ .|.+ .++=.+.+.||+||+|.+...|+..||+.
T Consensus 78 ------~~~~K~l--A~l~ssFeevllLDaD~vpl~~p~~lF~~ 113 (271)
T PF11051_consen 78 ------GFQNKWL--ALLFSSFEEVLLLDADNVPLVDPEKLFES 113 (271)
T ss_pred ------Cchhhhh--hhhhCCcceEEEEcCCcccccCHHHHhcC
Confidence 11 1111 24456789999999999999999999886
No 54
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=92.17 E-value=1.1 Score=41.25 Aligned_cols=101 Identities=15% Similarity=0.205 Sum_probs=63.2
Q ss_pred EEEEEeeChhhHHH-HHHHhhccCCcEEEEEEeCch--hHHHHHHHHhccccccccccEEEEEEeecCCCCchhhHHHHH
Q psy3847 479 VTLVAQLSMDRLQM-VEMLFKHWEGPISLTLYMSDA--EAQQFLSYAGNSEALRSRRNIGYHVVYKEGNFYPINTLRNVA 555 (664)
Q Consensus 479 VTLvTq~s~drL~~-l~~l~~~W~GPiS~av~~~~~--e~~~~~~~~~~~~~~~~r~~v~~h~v~~~~~~yPiN~LRNvA 555 (664)
|.+.|.-..+.|.. |..+.+.-..+.-+-|.-.+. +..++++-+.+ ....++++..+... .....||.|
T Consensus 2 vvip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~~~~~~~~~~~-------~~~~i~~i~~~~n~-g~~~~~n~~ 73 (169)
T PF00535_consen 2 VVIPTYNEAEYLERTLESLLKQTDPDFEIIVVDDGSTDETEEILEEYAE-------SDPNIRYIRNPENL-GFSAARNRG 73 (169)
T ss_dssp EEEEESS-TTTHHHHHHHHHHHSGCEEEEEEEECS-SSSHHHHHHHHHC-------CSTTEEEEEHCCCS-HHHHHHHHH
T ss_pred EEEEeeCCHHHHHHHHHHHhhccCCCEEEEEeccccccccccccccccc-------cccccccccccccc-ccccccccc
Confidence 55666666677775 445666655566665544433 33333333322 12224555544333 889999999
Q ss_pred hhcCCCCeEEEeecCcccCCCcHHHHHHHHHh
Q psy3847 556 LNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRS 587 (664)
Q Consensus 556 ~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~ 587 (664)
.+.|+++|++++|.|.++.++.-+.+.+.+.+
T Consensus 74 ~~~a~~~~i~~ld~D~~~~~~~l~~l~~~~~~ 105 (169)
T PF00535_consen 74 IKHAKGEYILFLDDDDIISPDWLEELVEALEK 105 (169)
T ss_dssp HHH--SSEEEEEETTEEE-TTHHHHHHHHHHH
T ss_pred ccccceeEEEEeCCCceEcHHHHHHHHHHHHh
Confidence 99999999999999999999988888777765
No 55
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=89.76 E-value=1.1 Score=47.15 Aligned_cols=49 Identities=18% Similarity=0.227 Sum_probs=40.4
Q ss_pred hHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEccee
Q psy3847 550 TLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFE 605 (664)
Q Consensus 550 ~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE 605 (664)
..||.|...|+.+|++++|.|..+.++.-+.+.+.+.+ ...++|.|...
T Consensus 73 ~a~N~g~~~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~-------~~~~~v~p~~~ 121 (299)
T cd02510 73 RARIAGARAATGDVLVFLDSHCEVNVGWLEPLLARIAE-------NRKTVVCPIID 121 (299)
T ss_pred HHHHHHHHHccCCEEEEEeCCcccCccHHHHHHHHHHh-------CCCeEEEeeec
Confidence 67999999999999999999999999988888777653 22356778654
No 56
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=89.35 E-value=1.7 Score=41.50 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=35.5
Q ss_pred cCCCCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 542 EGNFYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 542 ~~~~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
.+.-+.....||.|+..|+.+|++++|.|.+|+++.-+.+.+..
T Consensus 61 ~~~~~~~~~~~n~g~~~a~g~~i~~lD~D~~~~~~~l~~~~~~~ 104 (182)
T cd06420 61 EDEGFRKAKIRNKAIAAAKGDYLIFIDGDCIPHPDFIADHIELA 104 (182)
T ss_pred CCcchhHHHHHHHHHHHhcCCEEEEEcCCcccCHHHHHHHHHHh
Confidence 33446677889999999999999999999999988766655443
No 57
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=86.05 E-value=2.6 Score=46.37 Aligned_cols=144 Identities=15% Similarity=0.036 Sum_probs=74.8
Q ss_pred CccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhccccccCCCCCCCCCceeEEEEEEechhHHhh
Q psy3847 205 LPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFNTGVILLDLTKLRDI 284 (664)
Q Consensus 205 Lp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~~~~~~~~~p~~~~yfNSGVmLinL~~~R~~ 284 (664)
.| +.+.+.|||+|++|..---+| -+. +..+.. -++. +| ...+. .... -.|+|+||+||....|-..
T Consensus 195 ~P-eaEWiWWLDsDALImNmsfel-Ple-ry~~~N--lVih---g~-~~~l~-~~kd----W~GLNtGsFLIRNcqWSld 260 (429)
T PLN03182 195 HP-EVEWIWWMDSDALFTDMTFEI-PLE-KYEGYN--LVIH---GW-DELVY-DQKS----WIGLNTGSFLIRNCQWSLD 260 (429)
T ss_pred CC-CceEEEEecCCceeecCCCCC-CHh-HcCCcC--eeec---cc-hhhhe-eccc----cCccceeeEEEEcCHHHHH
Confidence 45 899999999999998631111 000 001100 0111 00 00000 0111 2499999999976665432
Q ss_pred c------------hhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeE---EEeCCccccccCCCCCChhhhhh---
Q psy3847 285 S------------WAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLV---YTLPCQWNVQLSDNTRSDELCYT--- 346 (664)
Q Consensus 285 ~------------~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v---~~Lp~~wN~q~~~~~~~~~~~~~--- 346 (664)
- ..+.|-++....+..+......||.+|-.++....+.+ ..|...|-++. +...- -.+++
T Consensus 261 lLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l~G-yw~~i-v~~yee~~ 338 (429)
T PLN03182 261 LLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHG-YWVGL-VDRYEEMM 338 (429)
T ss_pred HHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecceecc-ccHHH-HHHHHHHH
Confidence 1 11223334444555567788999999999885442222 44555554442 22110 11111
Q ss_pred --------hcCCcEEEEcCCCCCCCcc
Q psy3847 347 --------ELTDLKIIHWNSPKKLKVK 365 (664)
Q Consensus 347 --------~~~~~~IIHf~g~~KPW~~ 365 (664)
...-|.|.||+|- ||-..
T Consensus 339 ~~~~~g~gd~rwPfvtHF~Gc-kpC~~ 364 (429)
T PLN03182 339 EKYHPGLGDDRWPFVTHFVGC-KPCGG 364 (429)
T ss_pred HhcCCCCCCcccceeEeeccc-eecCC
Confidence 1245899999995 66643
No 58
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=85.76 E-value=32 Score=36.12 Aligned_cols=42 Identities=17% Similarity=0.133 Sum_probs=34.1
Q ss_pred cceEEEEEEEeCCCchHHHHHHHHHHHhhC--CCCeEEEEEeCch
Q psy3847 12 CEVIQVAIVCAGYNSTRSLVTLIKSILFYR--KNPLHFHLITDTV 54 (664)
Q Consensus 12 ~~~ihI~~v~~g~~~~~~~~~~ikSil~~~--~~~l~fhii~d~~ 54 (664)
+-+|-|.++|.| +|...+...++|.=.+- +..++++|++|..
T Consensus 33 n~tIgl~vfatG-kY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~ 76 (271)
T cd02515 33 NITIGLTVFAVG-KYTEFLERFLESAEKHFMVGYRVIYYIFTDKP 76 (271)
T ss_pred CCEEEEEEEEec-cHHHHHHHHHHHHHHhccCCCeeEEEEEeCCc
Confidence 458889999999 89988889999986653 4459999999865
No 59
>KOG1928|consensus
Probab=85.61 E-value=0.68 Score=50.22 Aligned_cols=43 Identities=30% Similarity=0.574 Sum_probs=29.2
Q ss_pred EEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhccccccCCCCCCCCCceeEEEEEEech
Q psy3847 212 TIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFNTGVILLDLT 279 (664)
Q Consensus 212 vLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~~~~~~~~~p~~~~yfNSGVmLinL~ 279 (664)
=||||+|+||++++..|= .++|+.+....| .+.|-+||.++..
T Consensus 241 GvYLDTDvIvLksl~~l~---------N~ig~~~~~~~~----------------~~lnnavl~F~k~ 283 (409)
T KOG1928|consen 241 GVYLDTDVIVLKSLSNLR---------NVIGVDPATQAW----------------TRLNNAVLIFDKN 283 (409)
T ss_pred CEEeeccEEEeccccccc---------ccccccchhhHH----------------HhhcCceeecCCC
Confidence 489999999999998873 234533332222 2577788888754
No 60
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=84.35 E-value=10 Score=34.88 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=36.0
Q ss_pred CCCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 544 NFYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 544 ~~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
.-......||.|++.+.+++++++|.|.+++++..+.+.+...
T Consensus 58 ~~~g~~~a~n~~~~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~ 100 (166)
T cd04186 58 ENLGFGAGNNQGIREAKGDYVLLLNPDTVVEPGALLELLDAAE 100 (166)
T ss_pred CCcChHHHhhHHHhhCCCCEEEEECCCcEECccHHHHHHHHHH
Confidence 3455678999999999999999999999999987777766543
No 61
>KOG1950|consensus
Probab=82.60 E-value=1.9 Score=47.31 Aligned_cols=123 Identities=18% Similarity=0.139 Sum_probs=75.0
Q ss_pred CCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhccccccCCCCCCCCCceeEEEEEEechhHHhhchh
Q psy3847 208 TLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFNTGVILLDLTKLRDISWA 287 (664)
Q Consensus 208 ~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~ 287 (664)
.++|.+-+|+|..+..+...+|....++.. . .. ....||+|.|++-..-. ++.
T Consensus 163 ~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~--------------------~-~~---l~~~~n~~~~v~~ps~~---~~~ 215 (369)
T KOG1950|consen 163 FYSKLVKIDADDCILKNDDLLFSNWPDLFA--------------------T-NI---LPLIFNSGLLVFEPSLC---NYK 215 (369)
T ss_pred ccccceEEeccchhcCChhhhhhhchhhcc--------------------C-CC---ccceeccCccccCCCcc---chh
Confidence 578999999999999988888774211110 0 01 11258999988844331 122
Q ss_pred HHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEEeCCccccccCCCCCCh--hhhh-hhcCCcEEEEcCCCCCCCc
Q psy3847 288 GFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYTLPCQWNVQLSDNTRSD--ELCY-TELTDLKIIHWNSPKKLKV 364 (664)
Q Consensus 288 ~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~Lp~~wN~q~~~~~~~~--~~~~-~~~~~~~IIHf~g~~KPW~ 364 (664)
. +.+... .......+||+++|.+|...++ ..|..+|...+...+.. .... .........||.|..|||.
T Consensus 216 ~-~~~~~~----~~~~~~~~~q~~l~~~f~~~~~---~~~~~~n~~~~~~~~~p~~~~l~~~~~~~~~~~~y~~~~~p~~ 287 (369)
T KOG1950|consen 216 D-LMEFSE----EFESYNGADQGFLHLIFSWIPD---RPPPSVNLNLAKLWRHPKKNDLSRASSVLRYALHYLGANKPEL 287 (369)
T ss_pred h-HHHhhc----ccCCCCCccchhhHHHhhcccC---CCcccccccccccccCccccchhhcccccchhhhccccCCCCc
Confidence 1 111211 2355679999999999998843 77888888765544331 1111 1123445569999877775
Q ss_pred c
Q psy3847 365 K 365 (664)
Q Consensus 365 ~ 365 (664)
.
T Consensus 288 ~ 288 (369)
T KOG1950|consen 288 C 288 (369)
T ss_pred c
Confidence 3
No 62
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=81.24 E-value=2.9 Score=43.92 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=26.4
Q ss_pred ccccCccCCCeEEEEecceeeccChHHHHHHh
Q psy3847 201 LPKVLPETLAKTIVLDTDVIFATDIAQLWALF 232 (664)
Q Consensus 201 lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~ 232 (664)
+.-++. ..+.||+||+|++...|++.||+..
T Consensus 84 lA~l~s-sFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 84 LALLFS-SFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred hhhhhC-CcceEEEEcCCcccccCHHHHhcCc
Confidence 344455 8899999999999999999999874
No 63
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=81.16 E-value=51 Score=35.71 Aligned_cols=114 Identities=10% Similarity=0.103 Sum_probs=54.7
Q ss_pred CCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhcc---ccccCCC-----CCC-CC-CceeEEEEEEe
Q psy3847 208 TLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGK---LWKNHKP-----WPA-LG-RGFNTGVILLD 277 (664)
Q Consensus 208 ~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~---~~~~~~~-----~p~-~~-~yfNSGVmLin 277 (664)
++|-+..+|+|++|.+++.. + .. +..+|... ..||... +...+.+ +|. .| -|+-+|+.==-
T Consensus 188 EvDYLFc~dvd~~F~~~vGv--E----~L-g~lva~LH--p~~y~~~~~~FpYERrp~S~AyIp~~eGDfYY~ga~fGGt 258 (337)
T PF03414_consen 188 EVDYLFCMDVDMVFQDHVGV--E----IL-GDLVATLH--PWFYFKPRESFPYERRPKSQAYIPYGEGDFYYHGAFFGGT 258 (337)
T ss_dssp H-SEEEEEESSEEE-S-B-G--G----G--SSEEEEES--TTTTTSTGGGS--B-STTSTTB--TT--S--EECCEEEEC
T ss_pred cCCEEEEEecceEEecccCH--H----HH-HHHHHHhC--HHHHCCChhhCccccCccccccccCCCCCeEEeceecCCc
Confidence 78999999999999998763 1 12 34555443 2244321 1111111 121 12 25555554433
Q ss_pred chhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHh-cCCCeEEEeCCcccccc
Q psy3847 278 LTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIIS-EHPYLVYTLPCQWNVQL 334 (664)
Q Consensus 278 L~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~-~~p~~v~~Lp~~wN~q~ 334 (664)
..... ++.+.|...+..-.++.-.-.++|..-||..|- .+| .+.|+++|++..
T Consensus 259 ~~~vl--~Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~KP--tKvLSPEY~Wd~ 312 (337)
T PF03414_consen 259 VEEVL--RLTEACHQGIMQDKANGIEALWHDESHLNKYFLYHKP--TKVLSPEYCWDE 312 (337)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS----SEEE-GGGSBSH
T ss_pred HHHHH--HHHHHHHHHHHhhhhcCceEeccchhhhHHHHhhCCC--ceecCHHHccCc
Confidence 33332 233444443333333334457999999999776 666 579999998854
No 64
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=79.92 E-value=5.4 Score=36.54 Aligned_cols=100 Identities=15% Similarity=0.199 Sum_probs=59.1
Q ss_pred EEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCch---hHHHHHHHhhccCCCceeEEEEecccccccccccCCCCc
Q psy3847 17 VAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTV---ALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHY 93 (664)
Q Consensus 17 I~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~---s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~ 93 (664)
|++.+.+ -...+..+|.|++.....+..+.|+.|.. +.+.++++.+ ....+.++..+...
T Consensus 2 vvip~~n--~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~~~~~~~~~~~----~~~~i~~i~~~~n~----------- 64 (169)
T PF00535_consen 2 VVIPTYN--EAEYLERTLESLLKQTDPDFEIIVVDDGSTDETEEILEEYAE----SDPNIRYIRNPENL----------- 64 (169)
T ss_dssp EEEEESS---TTTHHHHHHHHHHHSGCEEEEEEEECS-SSSHHHHHHHHHC----CSTTEEEEEHCCCS-----------
T ss_pred EEEEeeC--CHHHHHHHHHHHhhccCCCEEEEEeccccccccccccccccc----cccccccccccccc-----------
Confidence 4454544 47888899999999977778888887655 3444444443 23445555554321
Q ss_pred cchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHHhhh
Q psy3847 94 SGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWALFSR 137 (664)
Q Consensus 94 ~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~f~~ 137 (664)
|..+-....+-..-. +-++.+|.|.++..+ +.+|.+.+.+
T Consensus 65 -g~~~~~n~~~~~a~~---~~i~~ld~D~~~~~~~l~~l~~~~~~ 105 (169)
T PF00535_consen 65 -GFSAARNRGIKHAKG---EYILFLDDDDIISPDWLEELVEALEK 105 (169)
T ss_dssp -HHHHHHHHHHHH--S---SEEEEEETTEEE-TTHHHHHHHHHHH
T ss_pred -cccccccccccccce---eEEEEeCCCceEcHHHHHHHHHHHHh
Confidence 222222223322222 368999999999888 7888777444
No 65
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=78.58 E-value=23 Score=32.17 Aligned_cols=56 Identities=16% Similarity=-0.010 Sum_probs=40.3
Q ss_pred CchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEcceeec
Q psy3847 546 YPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFETQ 607 (664)
Q Consensus 546 yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE~~ 607 (664)
.-.-..||.|+..++++|++++|.|.++.++.-+.+..... .......|.+.....
T Consensus 64 ~g~~~~~n~~~~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~ 119 (180)
T cd06423 64 GGKAGALNAGLRHAKGDIVVVLDADTILEPDALKRLVVPFF------ADPKVGAVQGRVRVR 119 (180)
T ss_pred CCchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHhc------cCCCeeeEeeeEEEe
Confidence 34567899999999999999999999998876666622221 234556666666543
No 66
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=76.77 E-value=12 Score=33.17 Aligned_cols=96 Identities=15% Similarity=0.072 Sum_probs=53.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCccchh
Q psy3847 18 AIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYSGVY 97 (664)
Q Consensus 18 ~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~~~~ 97 (664)
++.+.|. .+.+..+|+|++.....+..+.++++....+....+.+.... ......+... ...|..
T Consensus 2 ii~~~~~--~~~l~~~l~s~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------------~~~g~~ 66 (156)
T cd00761 2 IIPAYNE--EPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKK-DPRVIRVINE------------ENQGLA 66 (156)
T ss_pred EEeecCc--HHHHHHHHHHHHhCCccceEEEEEeCCCCccHHHHHHHHHhc-CCCeEEEEec------------CCCChH
Confidence 3444443 788899999999987767888888876544333333222211 0111111111 111222
Q ss_pred hhhhhccCCcCccccCeEEEEecceeecccHHHH
Q psy3847 98 GLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQL 131 (664)
Q Consensus 98 ~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eL 131 (664)
.-....+... ..+.++++|+|.++..+..+.
T Consensus 67 ~~~~~~~~~~---~~d~v~~~d~D~~~~~~~~~~ 97 (156)
T cd00761 67 AARNAGLKAA---RGEYILFLDADDLLLPDWLER 97 (156)
T ss_pred HHHHHHHHHh---cCCEEEEECCCCccCccHHHH
Confidence 2222223222 468899999999998876554
No 67
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=75.46 E-value=1.1 Score=47.37 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=28.0
Q ss_pred hhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHH
Q psy3847 96 VYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWAL 134 (664)
Q Consensus 96 ~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~ 134 (664)
...+.||.+=+. ...+||||||+|+|++.++.+|+..
T Consensus 154 ~~mftKLrVfeq--tEyDRvifLDsDaivlknmDklFd~ 190 (368)
T COG5597 154 LDMFTKLRVFEQ--TEYDRVIFLDSDAIVLKNMDKLFDY 190 (368)
T ss_pred HHHhHHHHhhhh--hhhceEEEeccchHHhhhhHHHhcc
Confidence 334455544333 3579999999999999999999984
No 68
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=74.81 E-value=22 Score=35.37 Aligned_cols=49 Identities=6% Similarity=0.036 Sum_probs=37.4
Q ss_pred EEEEeecCCCCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 536 YHVVYKEGNFYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 536 ~h~v~~~~~~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
++++-.++.-.. ..||.|++.|+++|++++|.|..+.++.-+.+.+...
T Consensus 59 v~~i~~~~~~~~--~a~N~g~~~a~~d~v~~lD~D~~~~~~~l~~~~~~~~ 107 (249)
T cd02525 59 IRLIDNPKRIQS--AGLNIGIRNSRGDIIIRVDAHAVYPKDYILELVEALK 107 (249)
T ss_pred EEEEeCCCCCch--HHHHHHHHHhCCCEEEEECCCccCCHHHHHHHHHHHh
Confidence 455544432232 4699999999999999999999999998888776543
No 69
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=73.67 E-value=6.2 Score=38.23 Aligned_cols=54 Identities=13% Similarity=0.069 Sum_probs=42.7
Q ss_pred chhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEcceee
Q psy3847 547 PINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFET 606 (664)
Q Consensus 547 PiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE~ 606 (664)
-...-||.|+..|+++|++++|.|.++.++..+.+.+.+.+ .++..+|.+.++.
T Consensus 67 G~~~a~N~g~~~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~ 120 (201)
T cd04195 67 GLGKALNEGLKHCTYDWVARMDTDDISLPDRFEKQLDFIEK------NPEIDIVGGGVLE 120 (201)
T ss_pred cHHHHHHHHHHhcCCCEEEEeCCccccCcHHHHHHHHHHHh------CCCeEEEcccEEE
Confidence 44667999999999999999999999999988888776643 3345666666654
No 70
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=72.49 E-value=20 Score=36.08 Aligned_cols=103 Identities=12% Similarity=0.147 Sum_probs=58.3
Q ss_pred eEEEEEEEeCCCchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCC
Q psy3847 14 VIQVAIVCAGYNSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNK 91 (664)
Q Consensus 14 ~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~ 91 (664)
.+-|++.+.+ -...+..+|+|++.....+ +.+.++.|.. .+...++++.+... .+.++..+..
T Consensus 30 ~isVvip~~n--~~~~l~~~l~si~~q~~~~~~~eiivvdd~s-~d~t~~~~~~~~~~--~v~~i~~~~~---------- 94 (251)
T cd06439 30 TVTIIIPAYN--EEAVIEAKLENLLALDYPRDRLEIIVVSDGS-TDGTAEIAREYADK--GVKLLRFPER---------- 94 (251)
T ss_pred EEEEEEecCC--cHHHHHHHHHHHHhCcCCCCcEEEEEEECCC-CccHHHHHHHHhhC--cEEEEEcCCC----------
Confidence 4556665554 4788899999998765433 6666665543 33333444444322 2333333221
Q ss_pred CccchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHHhh
Q psy3847 92 HYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWALFS 136 (664)
Q Consensus 92 ~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~f~ 136 (664)
.|..+-....+...-. +=|+++|+|.++..+ ++++++.+.
T Consensus 95 --~g~~~a~n~gi~~a~~---d~i~~lD~D~~~~~~~l~~l~~~~~ 135 (251)
T cd06439 95 --RGKAAALNRALALATG---EIVVFTDANALLDPDALRLLVRHFA 135 (251)
T ss_pred --CChHHHHHHHHHHcCC---CEEEEEccccCcCHHHHHHHHHHhc
Confidence 1222223333333211 669999999999766 788887743
No 71
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=71.84 E-value=41 Score=30.76 Aligned_cols=91 Identities=14% Similarity=0.132 Sum_probs=52.6
Q ss_pred CchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCccchhhhhhhcc
Q psy3847 25 NSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYSGVYGLLKLTL 104 (664)
Q Consensus 25 ~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~~~~~~~rL~l 104 (664)
+-...+..+|+|+......+..+.++.|....+. .+.++... . ++.++..... .|.++-....+
T Consensus 7 ~~~~~l~~~l~sl~~~~~~~~~iiivdd~s~~~~-~~~~~~~~-~--~~~~~~~~~~------------~g~~~a~n~~~ 70 (166)
T cd04186 7 NSLEYLKACLDSLLAQTYPDFEVIVVDNASTDGS-VELLRELF-P--EVRLIRNGEN------------LGFGAGNNQGI 70 (166)
T ss_pred CCHHHHHHHHHHHHhccCCCeEEEEEECCCCchH-HHHHHHhC-C--CeEEEecCCC------------cChHHHhhHHH
Confidence 3378889999999987766678877776554333 33333321 1 2332222211 12233333333
Q ss_pred CCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 105 PKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 105 p~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
... .-+-++++|.|.++..+ +..+++.
T Consensus 71 ~~~---~~~~i~~~D~D~~~~~~~l~~~~~~ 98 (166)
T cd04186 71 REA---KGDYVLLLNPDTVVEPGALLELLDA 98 (166)
T ss_pred hhC---CCCEEEEECCCcEECccHHHHHHHH
Confidence 333 46789999999999776 5555554
No 72
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=71.54 E-value=7.1 Score=39.78 Aligned_cols=70 Identities=21% Similarity=0.257 Sum_probs=45.3
Q ss_pred EEEEEeCchh----HHHHHHHHhccccccccccEEEEEEeec-CCCCchh--hHHHH----HhhcCCCCeEEEeecCccc
Q psy3847 505 SLTLYMSDAE----AQQFLSYAGNSEALRSRRNIGYHVVYKE-GNFYPIN--TLRNV----ALNQVSTPYVFLLDIDFLP 573 (664)
Q Consensus 505 S~av~~~~~e----~~~~~~~~~~~~~~~~r~~v~~h~v~~~-~~~yPiN--~LRNv----A~~~a~T~~v~~~DiD~~P 573 (664)
.+||-+|=.+ +..++.++.. . ..|+.+.+++..-+ ..-.|-| .|-|+ |++.-.++++++-|||++|
T Consensus 3 ~~aiivpyr~R~~~l~~~l~~~~~--~-L~rq~~~~~i~vi~Q~~~~~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP 79 (219)
T cd00899 3 KVAIIVPFRNRFEHLLIFLPHLHP--F-LQRQQLDYRIFVIEQVGNFRFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLP 79 (219)
T ss_pred ceEEEEecCCHHHHHHHHHHHHHH--H-HHhcCCcEEEEEEEecCCccchhhhhhhHHHHHHhhcCCccEEEEecccccc
Confidence 5788888543 2333333322 2 23667777766432 2335777 57799 6666668999999999999
Q ss_pred CCCc
Q psy3847 574 MFGL 577 (664)
Q Consensus 574 s~~l 577 (664)
-.+.
T Consensus 80 ~~~~ 83 (219)
T cd00899 80 ENDR 83 (219)
T ss_pred cCcc
Confidence 8764
No 73
>KOG1928|consensus
Probab=69.88 E-value=2.3 Score=46.19 Aligned_cols=31 Identities=32% Similarity=0.551 Sum_probs=25.2
Q ss_pred EEEecceeecccHHHHHHHhhhccccccccccccchhHHH
Q psy3847 116 IVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYL 155 (664)
Q Consensus 116 IyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~ 155 (664)
||||+|+||..++..|= +++|+.+.+..|++
T Consensus 242 vYLDTDvIvLksl~~l~---------N~ig~~~~~~~~~~ 272 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLR---------NVIGVDPATQAWTR 272 (409)
T ss_pred EEeeccEEEeccccccc---------ccccccchhhHHHh
Confidence 79999999999999874 45677777777765
No 74
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=68.99 E-value=39 Score=32.99 Aligned_cols=33 Identities=9% Similarity=0.000 Sum_probs=30.0
Q ss_pred hhHHHHHhhcCCCCeEEEeecCcccCCCcHHHH
Q psy3847 549 NTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYL 581 (664)
Q Consensus 549 N~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l 581 (664)
-..||.|+..|++++++++|.|..|.++.-+.+
T Consensus 61 ~~a~n~g~~~a~~~~i~~~D~D~~~~~~~l~~l 93 (221)
T cd02522 61 ARQMNAGAAAARGDWLLFLHADTRLPPDWDAAI 93 (221)
T ss_pred HHHHHHHHHhccCCEEEEEcCCCCCChhHHHHH
Confidence 467899999999999999999999998877776
No 75
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=68.16 E-value=4.7 Score=40.65 Aligned_cols=40 Identities=23% Similarity=0.204 Sum_probs=35.4
Q ss_pred hhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHh
Q psy3847 548 INTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRS 587 (664)
Q Consensus 548 iN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~ 587 (664)
.-..||.|+..|+.++|+.+|.|-++++++.+.+.+....
T Consensus 59 ~~~~~n~~~~~a~~d~vl~lDaD~~~~~~~~~~l~~~~~~ 98 (229)
T cd02511 59 FGAQRNFALELATNDWVLSLDADERLTPELADEILALLAT 98 (229)
T ss_pred hHHHHHHHHHhCCCCEEEEEeCCcCcCHHHHHHHHHHHhC
Confidence 4577999999999999999999999999999988877653
No 76
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=67.25 E-value=48 Score=31.38 Aligned_cols=40 Identities=13% Similarity=0.025 Sum_probs=33.8
Q ss_pred CchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 546 YPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 546 yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
...-..||.|++.|+.+||+++|.|-.+.++....+....
T Consensus 61 ~g~~~a~n~~~~~a~~~~v~~ld~D~~~~~~~~~~~~~~~ 100 (202)
T cd06433 61 KGIYDAMNKGIALATGDIIGFLNSDDTLLPGALLAVVAAF 100 (202)
T ss_pred cCHHHHHHHHHHHcCCCEEEEeCCCcccCchHHHHHHHHH
Confidence 4567889999999999999999999999988777776433
No 77
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=66.56 E-value=26 Score=33.91 Aligned_cols=43 Identities=16% Similarity=0.118 Sum_probs=34.7
Q ss_pred CCCCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 543 GNFYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 543 ~~~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
|.-.-+|..+|.|. .+..+|++++|.|..+.++..+.+.+...
T Consensus 63 g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~~~~l~~l~~~~~ 105 (202)
T cd04185 63 GGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPDPDALEKLLAYAD 105 (202)
T ss_pred chhhHHHHHHHHHh-ccCCCEEEEeCCCCCcChHHHHHHHHHHh
Confidence 44456788888887 67899999999999999988777776654
No 78
>PLN03181 glycosyltransferase; Provisional
Probab=66.16 E-value=16 Score=40.42 Aligned_cols=108 Identities=20% Similarity=0.301 Sum_probs=61.1
Q ss_pred CccCCCeEEEEecceeeccChHHH-HHHhhhcCCCcEEEEeeccchhhhccccccCCCCCC------CCCceeEEEEEEe
Q psy3847 205 LPETLAKTIVLDTDVIFATDIAQL-WALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPA------LGRGFNTGVILLD 277 (664)
Q Consensus 205 Lp~~~dkvLYLD~D~iv~~DI~eL-w~~~~~~~~~~~~a~v~d~~~~y~~~~~~~~~~~p~------~~~yfNSGVmLin 277 (664)
.| +.+.+-|||+|++|...=-+| .+ ++.+..+ + -.+||. .-.|+|+||+||.
T Consensus 196 ~P-eAEWfWWLDsDALIMNp~~sLPl~---ry~~~NL---v--------------vhg~p~~vy~~qdw~GlN~GsFLIR 254 (453)
T PLN03181 196 HP-EAEWIWWVDSDAVFTDMDFKLPLH---RYRDHNL---V--------------VHGWPKLIYEKRSWTALNAGVFLIR 254 (453)
T ss_pred CC-CceEEEEecCCceeecCCCCCCHh---hcCCccc---c--------------ccCCcccccccccccccceeeeEEe
Confidence 56 789999999999998651111 00 1111110 0 011121 1259999999997
Q ss_pred chhHHhh---ch---------hHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeE---EEeCCccccc
Q psy3847 278 LTKLRDI---SW---------AGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLV---YTLPCQWNVQ 333 (664)
Q Consensus 278 L~~~R~~---~~---------~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v---~~Lp~~wN~q 333 (664)
-..|-.. .| .++|-++....++.+....-.||..|-.++..+.+.+ ..|...|-++
T Consensus 255 NcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~~ 325 (453)
T PLN03181 255 NCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYFE 325 (453)
T ss_pred cCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceeee
Confidence 6655432 11 1233344445555556667889999988776654433 3455555444
No 79
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=65.55 E-value=46 Score=32.94 Aligned_cols=100 Identities=21% Similarity=0.257 Sum_probs=55.3
Q ss_pred EEEEEEEeCCCch-HHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCc
Q psy3847 15 IQVAIVCAGYNST-RSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHY 93 (664)
Q Consensus 15 ihI~~v~~g~~~~-~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~ 93 (664)
|-|++.+.+. . ..+..+|+|++..+ +..+.|+.|+.+.+....+.+....+.+.+ ..-. +
T Consensus 2 isVvIp~~ne--~~~~l~~~l~sl~~q~--~~eiivvdd~s~d~~~~~l~~~~~~~~~~v--~~~~----------~--- 62 (235)
T cd06434 2 VTVIIPVYDE--DPDVFRECLRSILRQK--PLEIIVVTDGDDEPYLSILSQTVKYGGIFV--ITVP----------H--- 62 (235)
T ss_pred eEEEEeecCC--ChHHHHHHHHHHHhCC--CCEEEEEeCCCChHHHHHHHhhccCCcEEE--EecC----------C---
Confidence 4566666553 5 88999999999876 678877776655443333322221112222 2111 1
Q ss_pred cchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHHhh
Q psy3847 94 SGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWALFS 136 (664)
Q Consensus 94 ~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~f~ 136 (664)
.|..+-....+... .-+-|++||.|.++..| +.++.+.|.
T Consensus 63 ~g~~~a~n~g~~~a---~~d~v~~lD~D~~~~~~~l~~l~~~~~ 103 (235)
T cd06434 63 PGKRRALAEGIRHV---TTDIVVLLDSDTVWPPNALPEMLKPFE 103 (235)
T ss_pred CChHHHHHHHHHHh---CCCEEEEECCCceeChhHHHHHHHhcc
Confidence 11111111111111 34789999999999777 777777643
No 80
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=64.07 E-value=40 Score=30.61 Aligned_cols=94 Identities=19% Similarity=0.196 Sum_probs=51.0
Q ss_pred CchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCc-eeEEEEecccccccccccCCCCccchhhhhhhc
Q psy3847 25 NSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQ-VEVSFYLADSVVEDVSWIPNKHYSGVYGLLKLT 103 (664)
Q Consensus 25 ~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~-~~~~fy~~~~~~~~v~~ip~~~~~~~~~~~rL~ 103 (664)
|....+..+|+|++.....+..+.++.|..+.+. .+.+..+.... ..+.++..+.. .|...-....
T Consensus 7 n~~~~l~~~l~sl~~q~~~~~~iivvdd~s~d~t-~~~~~~~~~~~~~~~~~~~~~~~------------~g~~~~~n~~ 73 (180)
T cd06423 7 NEEAVIERTIESLLALDYPKLEVIVVDDGSTDDT-LEILEELAALYIRRVLVVRDKEN------------GGKAGALNAG 73 (180)
T ss_pred ChHHHHHHHHHHHHhCCCCceEEEEEeCCCccch-HHHHHHHhccccceEEEEEeccc------------CCchHHHHHH
Confidence 4468899999999987766788888866554322 22333332111 11122211111 1222222222
Q ss_pred cCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 104 LPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 104 lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
+... .-+-++++|+|.++..+ +.+++..
T Consensus 74 ~~~~---~~~~i~~~D~D~~~~~~~l~~~~~~ 102 (180)
T cd06423 74 LRHA---KGDIVVVLDADTILEPDALKRLVVP 102 (180)
T ss_pred HHhc---CCCEEEEECCCCCcChHHHHHHHHH
Confidence 3222 34679999999999766 5555454
No 81
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=61.08 E-value=7.7 Score=37.52 Aligned_cols=39 Identities=23% Similarity=0.122 Sum_probs=34.4
Q ss_pred chhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 547 PINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 547 PiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
-....||.|...++++|++++|.|..+.++..+.+.+..
T Consensus 70 g~~~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~ 108 (202)
T cd04184 70 GISAATNSALELATGEFVALLDHDDELAPHALYEVVKAL 108 (202)
T ss_pred CHHHHHHHHHHhhcCCEEEEECCCCcCChHHHHHHHHHH
Confidence 345679999999999999999999999999888887766
No 82
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=60.71 E-value=39 Score=33.96 Aligned_cols=37 Identities=19% Similarity=0.059 Sum_probs=32.1
Q ss_pred hhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 549 NTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 549 N~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
...||.|+..+++++++++|.|.+|.++..+.+.+..
T Consensus 98 ~~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~ 134 (251)
T cd06439 98 AAALNRALALATGEIVVFTDANALLDPDALRLLVRHF 134 (251)
T ss_pred HHHHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHHh
Confidence 4568999999999999999999999988777776665
No 83
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=59.03 E-value=11 Score=42.33 Aligned_cols=117 Identities=20% Similarity=0.287 Sum_probs=60.6
Q ss_pred CcceEEEEEEEeCCCchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhhccCCCceeEEEEeccccccccccc
Q psy3847 11 TCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWI 88 (664)
Q Consensus 11 ~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~i 88 (664)
..+.+-|++++| |...++..+|.||+.++... ..+.|.-|.. .+...+.++.+.. .++ .+.+.+ . +.+.-.
T Consensus 91 ~~~~~pVlV~Ac--NRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~-~~~~~~vi~~y~~-~v~-~i~~~~-~-~~i~~~ 163 (434)
T PF03071_consen 91 KEPVIPVLVFAC--NRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGD-DEEVAEVIKSYGD-QVT-YIQHPD-F-SPITIP 163 (434)
T ss_dssp ------EEEEES--S-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT--HHHHHHHHGGGG-GSE-EEE-S----S-----
T ss_pred CCCcceEEEEec--CCcHHHHHHHHHHHHcCCCCCCccEEEEecCC-cHHHHHHHHHhhh-hhe-eeecCC-c-CCceeC
Confidence 345777778777 55888999999999987653 3444433443 3334444555521 122 122221 1 112111
Q ss_pred CC----CCccchhhhhhhccCCcCcc-ccCeEEEEecceeecccHHHHHHH
Q psy3847 89 PN----KHYSGVYGLLKLTLPKVLPE-TLAKTIVLDTDVIFATDIAQLWAL 134 (664)
Q Consensus 89 p~----~~~~~~~~~~rL~lp~iLP~-~v~kvIyLD~Dilv~~di~eLw~~ 134 (664)
|. ..|.+++.-+|..+..++.. ..++||.|.=|+.+..|.-+-+..
T Consensus 164 ~~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 164 PKEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp TT-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred cccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 21 13455677777777777753 578999999999999999987765
No 84
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=56.73 E-value=17 Score=36.25 Aligned_cols=48 Identities=17% Similarity=0.192 Sum_probs=35.6
Q ss_pred HHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEccee
Q psy3847 551 LRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFE 605 (664)
Q Consensus 551 LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE 605 (664)
.+|.|...++.+|++++|.|.++.++.-+.+..... .++.+.|-+-.+
T Consensus 78 a~n~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~~~~-------~~~v~~v~~~~~ 125 (232)
T cd06437 78 ALAEGMKVAKGEYVAIFDADFVPPPDFLQKTPPYFA-------DPKLGFVQTRWG 125 (232)
T ss_pred HHHHHHHhCCCCEEEEEcCCCCCChHHHHHhhhhhc-------CCCeEEEeccee
Confidence 589999999999999999999999887766544332 234555555443
No 85
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=56.60 E-value=41 Score=36.55 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=64.9
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhC--CCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccc-cCCC
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYR--KNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSW-IPNK 91 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~--~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~-ip~~ 91 (664)
+-|+++++ |....+..+|.||+... ..+..++|..|+...+ ..+.++.+. ..++ .+.+.+.....+.- -...
T Consensus 2 ~PVlv~ay--NRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~-~~~~v~~~~-~~i~-~i~~~~~~~~~~~~~~~~~ 76 (334)
T cd02514 2 IPVLVIAC--NRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE-VADVAKSFG-DGVT-HIQHPPISIKNVNPPHKFQ 76 (334)
T ss_pred cCEEEEec--CCHHHHHHHHHHHHhccccCCCceEEEEeCCCchH-HHHHHHhhc-cccE-EEEcccccccccCcccccc
Confidence 34666665 56889999999999985 4568888887776433 334444431 1222 11221111000000 0011
Q ss_pred CccchhhhhhhccCCcCcc-ccCeEEEEecceeecccHHHHHHH
Q psy3847 92 HYSGVYGLLKLTLPKVLPE-TLAKTIVLDTDVIFATDIAQLWAL 134 (664)
Q Consensus 92 ~~~~~~~~~rL~lp~iLP~-~v~kvIyLD~Dilv~~di~eLw~~ 134 (664)
.|.+++.-+|..+..++-. ..++||+||-|+++..|.-+-.+.
T Consensus 77 ~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~ 120 (334)
T cd02514 77 GYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQA 120 (334)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHH
Confidence 2233444333445544432 479999999999999998776554
No 86
>KOG3917|consensus
Probab=53.90 E-value=14 Score=37.48 Aligned_cols=70 Identities=21% Similarity=0.421 Sum_probs=44.0
Q ss_pred EEEEEeCchh-HHHHHHHHhccccccccccEEEEEEeecC---CCCchhhHHHHHhhcCC--CCeEEEeecCcccC
Q psy3847 505 SLTLYMSDAE-AQQFLSYAGNSEALRSRRNIGYHVVYKEG---NFYPINTLRNVALNQVS--TPYVFLLDIDFLPM 574 (664)
Q Consensus 505 S~av~~~~~e-~~~~~~~~~~~~~~~~r~~v~~h~v~~~~---~~yPiN~LRNvA~~~a~--T~~v~~~DiD~~Ps 574 (664)
-+||.+|=.| .+.++.|+-.......|++|+=|+..-+. ..|---.|=||+-..|. |+|+.|-|+|++|-
T Consensus 75 klavlVPfRdRfEELl~FvPHM~~FL~rq~v~HHI~vlNQvD~fRFNRAsLINVGf~eas~~~DYiaMhDVDLLPl 150 (310)
T KOG3917|consen 75 KLAVLVPFRDRFEELLEFVPHMSKFLHRQNVSHHILVLNQVDPFRFNRASLINVGFNEASRLCDYIAMHDVDLLPL 150 (310)
T ss_pred eEEEEechHHHHHHHHHhhHHHHHHHhhcCcceEEEEeeccCcceechhhheecchhhhcchhceeeecccccccC
Confidence 3677787654 34555554321112347889888875432 22333346677776653 99999999999985
No 87
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=52.27 E-value=1.4e+02 Score=29.25 Aligned_cols=41 Identities=20% Similarity=0.164 Sum_probs=33.5
Q ss_pred CCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 545 FYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 545 ~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
-++.. .+|.|++.++.+|++++|.|-.+.++.-+.+.+...
T Consensus 70 ~~~~~-~~n~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~ 110 (234)
T cd06421 70 HAKAG-NLNNALAHTTGDFVAILDADHVPTPDFLRRTLGYFL 110 (234)
T ss_pred CCcHH-HHHHHHHhCCCCEEEEEccccCcCccHHHHHHHHHh
Confidence 34433 379999999999999999999999988777776664
No 88
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=52.05 E-value=72 Score=31.12 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=32.3
Q ss_pred hhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 548 INTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 548 iN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
....+|.|+..+..+|++++|.|.++.++.-+.+.+...
T Consensus 70 ~~~a~n~g~~~~~~d~i~~~D~D~~~~~~~l~~l~~~~~ 108 (229)
T cd04192 70 KKNALTTAIKAAKGDWIVTTDADCVVPSNWLLTFVAFIQ 108 (229)
T ss_pred hHHHHHHHHHHhcCCEEEEECCCcccCHHHHHHHHHHhh
Confidence 345679999999999999999999999887777766443
No 89
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=51.61 E-value=62 Score=31.38 Aligned_cols=34 Identities=6% Similarity=-0.028 Sum_probs=29.1
Q ss_pred HHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 552 RNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 552 RNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
+|.|...++.+|++++|.|..+.++.-+.+.+..
T Consensus 78 ~n~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~ 111 (196)
T cd02520 78 LIKGYEEARYDILVISDSDISVPPDYLRRMVAPL 111 (196)
T ss_pred HHHHHHhCCCCEEEEECCCceEChhHHHHHHHHh
Confidence 4789999999999999999999888777776654
No 90
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=49.71 E-value=16 Score=35.87 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=31.8
Q ss_pred hhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 549 NTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 549 N~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
-..||.++..|+++|++++|.|..+.++.-+.+.+.+
T Consensus 67 ~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~ 103 (224)
T cd06442 67 GSAYIEGFKAARGDVIVVMDADLSHPPEYIPELLEAQ 103 (224)
T ss_pred HHHHHHHHHHcCCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 4689999999999999999999999888777766654
No 91
>PRK10073 putative glycosyl transferase; Provisional
Probab=49.38 E-value=20 Score=38.71 Aligned_cols=40 Identities=23% Similarity=0.233 Sum_probs=35.4
Q ss_pred chhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 547 PINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 547 PiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
-+...||.|++.|+++||+.+|.|-+..++..+.+.+.+.
T Consensus 72 G~~~arN~gl~~a~g~yi~flD~DD~~~p~~l~~l~~~~~ 111 (328)
T PRK10073 72 GVSVARNTGLAVATGKYVAFPDADDVVYPTMYETLMTMAL 111 (328)
T ss_pred ChHHHHHHHHHhCCCCEEEEECCCCccChhHHHHHHHHHH
Confidence 3577899999999999999999999999998888877654
No 92
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=49.37 E-value=14 Score=36.80 Aligned_cols=38 Identities=21% Similarity=0.151 Sum_probs=31.6
Q ss_pred hhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 548 INTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 548 iN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
...-+|.|+..++++||+++|.|..|.++.-+.+.+..
T Consensus 65 ~~~a~n~g~~~a~~d~v~~lD~D~~~~~~~l~~l~~~~ 102 (235)
T cd06434 65 KRRALAEGIRHVTTDIVVLLDSDTVWPPNALPEMLKPF 102 (235)
T ss_pred hHHHHHHHHHHhCCCEEEEECCCceeChhHHHHHHHhc
Confidence 34567999999999999999999999999766665554
No 93
>KOG4748|consensus
Probab=49.17 E-value=32 Score=37.58 Aligned_cols=154 Identities=18% Similarity=0.143 Sum_probs=79.9
Q ss_pred CCCeEEEEecceeeccChHHHHHHhhhcCCCc--EEEEeeccchhhh-------cccccc------CCCCCCCCCceeEE
Q psy3847 208 TLAKTIVLDTDVIFATDIAQLWALFSRLRQRQ--TIGLVENQSDWYL-------GKLWKN------HKPWPALGRGFNTG 272 (664)
Q Consensus 208 ~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~--~~a~v~d~~~~y~-------~~~~~~------~~~~p~~~~yfNSG 272 (664)
+.+-+=.||.|.+|..---+|=+.. +.... ..+...|+..|-. ...++. ..-.|....|+|+|
T Consensus 175 ~AeWIWWlD~DAlimn~~lsL~~~i--lk~~~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~~~~~~~ii~qD~nG~naG 252 (364)
T KOG4748|consen 175 DAEWIWWLDQDALIMNPDLSLQDHI--LKPENLVTHLLRNDQKSINPLNIFRLRPRTPSLDDLEDIAFIIPQDCNGINAG 252 (364)
T ss_pred CCcEEEEecccchhhCcccchhHHh--cCHHHHHHhhccccccccccCCccccccccccccchhhhceecccCCCCcccc
Confidence 8899999999999986544442222 22211 1222213322211 011100 01123333589999
Q ss_pred EEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCe---EEEeCCccccccCCCCCChhhh-hhhc
Q psy3847 273 VILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYL---VYTLPCQWNVQLSDNTRSDELC-YTEL 348 (664)
Q Consensus 273 VmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~---v~~Lp~~wN~q~~~~~~~~~~~-~~~~ 348 (664)
=+|+--.+|-+ .+.++..+-+-........+|+++-.++..||.+ |..||.++=-.... ..| +...
T Consensus 253 SfLirns~~~~-----~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~~~-----~~~~~g~~ 322 (364)
T KOG4748|consen 253 SFLIRNSEWGR-----LLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSYPN-----GAPGYGYE 322 (364)
T ss_pred ceEEecCccch-----hHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcCCC-----CCCCCccc
Confidence 99995554332 2223222211111334678899999998887643 56677665322111 111 1335
Q ss_pred CCcEEEEcCCCCCCCcc-CCCchhhHHHHH
Q psy3847 349 TDLKIIHWNSPKKLKVK-NKHMEFFRNLYL 377 (664)
Q Consensus 349 ~~~~IIHf~g~~KPW~~-~~~~~~f~~~y~ 377 (664)
+..-++||.|= |.. .| ...+.+.+.
T Consensus 323 egdlvvhFaGC---~~~~~C-~~~~~~y~~ 348 (364)
T KOG4748|consen 323 EGDLVVHFAGC---YVRNRC-LEEMEKYFN 348 (364)
T ss_pred cCCeEEEeccc---ccHhHH-HHHHHHHHH
Confidence 78899999996 655 34 333444333
No 94
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=46.64 E-value=94 Score=34.88 Aligned_cols=102 Identities=14% Similarity=0.172 Sum_probs=58.5
Q ss_pred cceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchh---HHHHHHHhhccCCCceeEEEEeccccccccccc
Q psy3847 12 CEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVA---LNILQTLFSTWSVPQVEVSFYLADSVVEDVSWI 88 (664)
Q Consensus 12 ~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s---~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~i 88 (664)
...+.|.+.+.++ ...+..+|+|++..+...+.+.++.|+.+ .+.++++.+.. ++ +.++..+...
T Consensus 74 ~p~vsViIP~yNE--~~~i~~~l~sll~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~--~~--v~vv~~~~n~------ 141 (444)
T PRK14583 74 HPLVSILVPCFNE--GLNARETIHAALAQTYTNIEVIAINDGSSDDTAQVLDALLAED--PR--LRVIHLAHNQ------ 141 (444)
T ss_pred CCcEEEEEEeCCC--HHHHHHHHHHHHcCCCCCeEEEEEECCCCccHHHHHHHHHHhC--CC--EEEEEeCCCC------
Confidence 3467888877765 56788999999876555688888876543 33444443332 22 3333332211
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
|.++-....+.. ..-+-++.+|+|.++..| +.++-+.
T Consensus 142 ------Gka~AlN~gl~~---a~~d~iv~lDAD~~~~~d~L~~lv~~ 179 (444)
T PRK14583 142 ------GKAIALRMGAAA---ARSEYLVCIDGDALLDKNAVPYLVAP 179 (444)
T ss_pred ------CHHHHHHHHHHh---CCCCEEEEECCCCCcCHHHHHHHHHH
Confidence 111112221211 234789999999999776 4555554
No 95
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=44.26 E-value=32 Score=34.14 Aligned_cols=55 Identities=20% Similarity=0.239 Sum_probs=38.8
Q ss_pred hhhHHHHHhhcCCC---CeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEccee
Q psy3847 548 INTLRNVALNQVST---PYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFE 605 (664)
Q Consensus 548 iN~LRNvA~~~a~T---~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE 605 (664)
....||.|.+.|+- +|++++|.|..+.++.-+.+. ....... .....+.+-|...
T Consensus 60 ~~~a~N~g~~~a~~~~~d~v~~lD~D~~~~~~~l~~l~-~~~~~~~--~~~~~~~~~~~~~ 117 (237)
T cd02526 60 IAKALNIGIKAALENGADYVLLFDQDSVPPPDMVEKLL-AYKILSD--KNSNIGAVGPRII 117 (237)
T ss_pred hHHhhhHHHHHHHhCCCCEEEEECCCCCcCHhHHHHHH-HHHHhhc--cCCCeEEEeeeEE
Confidence 78889999999864 999999999999988888775 1121111 2344555555544
No 96
>PRK11204 N-glycosyltransferase; Provisional
Probab=44.12 E-value=98 Score=34.14 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=56.9
Q ss_pred ceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCch---hHHHHHHHhhccCCCceeEEEEecccccccccccC
Q psy3847 13 EVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTV---ALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIP 89 (664)
Q Consensus 13 ~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~---s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip 89 (664)
..+-|++.+-++ ...+..+++|++..+..+..+.++.|+. +.+.++++.+.. .++.+.+.++.
T Consensus 54 p~vsViIp~yne--~~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~----~~v~~i~~~~n-------- 119 (420)
T PRK11204 54 PGVSILVPCYNE--GENVEETISHLLALRYPNYEVIAINDGSSDNTGEILDRLAAQI----PRLRVIHLAEN-------- 119 (420)
T ss_pred CCEEEEEecCCC--HHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHHHHhC----CcEEEEEcCCC--------
Confidence 356666665543 6778899999987655567888886644 233344443332 12333332211
Q ss_pred CCCccchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHHh
Q psy3847 90 NKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWALF 135 (664)
Q Consensus 90 ~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~f 135 (664)
.|.++-....+.. ..-+-++.+|+|.++..| +.++.+.|
T Consensus 120 ----~Gka~aln~g~~~---a~~d~i~~lDaD~~~~~d~L~~l~~~~ 159 (420)
T PRK11204 120 ----QGKANALNTGAAA---ARSEYLVCIDGDALLDPDAAAYMVEHF 159 (420)
T ss_pred ----CCHHHHHHHHHHH---cCCCEEEEECCCCCCChhHHHHHHHHH
Confidence 1122111222211 135789999999999776 56666654
No 97
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=42.91 E-value=28 Score=35.13 Aligned_cols=40 Identities=18% Similarity=0.082 Sum_probs=34.3
Q ss_pred chhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 547 PINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 547 PiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
..-..+|.|...++.+||+.+|.|..+.++.-+.+.+...
T Consensus 71 G~~~a~n~g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~ 110 (241)
T cd06427 71 TKPKACNYALAFARGEYVVIYDAEDAPDPDQLKKAVAAFA 110 (241)
T ss_pred chHHHHHHHHHhcCCCEEEEEcCCCCCChHHHHHHHHHHH
Confidence 4447899999999999999999999999988877776654
No 98
>PRK11204 N-glycosyltransferase; Provisional
Probab=41.67 E-value=1.6e+02 Score=32.35 Aligned_cols=39 Identities=15% Similarity=0.100 Sum_probs=32.8
Q ss_pred hhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 548 INTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 548 iN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
...-+|.|.+.++.+|++++|.|..|.++.-+.+.+...
T Consensus 122 ka~aln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~ 160 (420)
T PRK11204 122 KANALNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHFL 160 (420)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHHH
Confidence 456689999999999999999999999987776665553
No 99
>PRK10018 putative glycosyl transferase; Provisional
Probab=41.58 E-value=1.9e+02 Score=30.42 Aligned_cols=102 Identities=16% Similarity=0.219 Sum_probs=58.2
Q ss_pred eEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchh-HHHHHHHhhccCCCceeEEEEecccccccccccCCCC
Q psy3847 14 VIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVA-LNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKH 92 (664)
Q Consensus 14 ~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s-~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~ 92 (664)
.+-|++.+ .|....+..+|.|++..+-.++.+.|+.|..+ .+.+.+..+....+ ++.+...+.
T Consensus 6 ~VSVIip~--yN~~~~l~~~l~Svl~Qt~~~~EiIVVDDgS~~~~~~~~~~~~~~~~--ri~~i~~~~------------ 69 (279)
T PRK10018 6 LISIYMPT--WNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDP--RITYIHNDI------------ 69 (279)
T ss_pred EEEEEEEe--CCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCHHHHHHHHHHcCCC--CEEEEECCC------------
Confidence 46666655 45577788999999987666688887766543 24455555544322 333333221
Q ss_pred ccchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 93 YSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 93 ~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
-.|.+.-.-..+... .=+=|++||+|.++..+ |..+.+.
T Consensus 70 n~G~~~a~N~gi~~a---~g~~I~~lDaDD~~~p~~l~~~~~~ 109 (279)
T PRK10018 70 NSGACAVRNQAIMLA---QGEYITGIDDDDEWTPNRLSVFLAH 109 (279)
T ss_pred CCCHHHHHHHHHHHc---CCCEEEEECCCCCCCccHHHHHHHH
Confidence 122222111111111 23568999999999777 5655554
No 100
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=40.81 E-value=53 Score=28.91 Aligned_cols=37 Identities=24% Similarity=0.292 Sum_probs=31.6
Q ss_pred CCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHH
Q psy3847 545 FYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYL 581 (664)
Q Consensus 545 ~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l 581 (664)
..-....+|.|+..+.+++++++|.|..+.++....+
T Consensus 62 ~~g~~~~~~~~~~~~~~d~v~~~d~D~~~~~~~~~~~ 98 (156)
T cd00761 62 NQGLAAARNAGLKAARGEYILFLDADDLLLPDWLERL 98 (156)
T ss_pred CCChHHHHHHHHHHhcCCEEEEECCCCccCccHHHHH
Confidence 3456678899999999999999999999998877776
No 101
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=40.59 E-value=1.4e+02 Score=28.57 Aligned_cols=99 Identities=12% Similarity=0.126 Sum_probs=51.1
Q ss_pred EEEEEEEeCCCch-HHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCc
Q psy3847 15 IQVAIVCAGYNST-RSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHY 93 (664)
Q Consensus 15 ihI~~v~~g~~~~-~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~ 93 (664)
+-|++.+-+ -. ..+..+|+||+.....+..+.++.++.+.+..+.+++.+....-++.++.....
T Consensus 3 vsiii~~~n--~~~~~l~~~l~sl~~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~------------ 68 (202)
T cd04184 3 ISIVMPVYN--TPEKYLREAIESVRAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREEN------------ 68 (202)
T ss_pred EEEEEeccc--CcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccC------------
Confidence 455555544 35 889999999998766667777776554333334333322111112333322211
Q ss_pred cchhhhhhhccCCcCccccCeEEEEecceeecccHHH
Q psy3847 94 SGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQ 130 (664)
Q Consensus 94 ~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~e 130 (664)
.|.+.-.-..+... .-+=++.+|+|.++..|..+
T Consensus 69 ~g~~~a~n~g~~~a---~~d~i~~ld~D~~~~~~~l~ 102 (202)
T cd04184 69 GGISAATNSALELA---TGEFVALLDHDDELAPHALY 102 (202)
T ss_pred CCHHHHHHHHHHhh---cCCEEEEECCCCcCChHHHH
Confidence 11111111111111 12678999999999776433
No 102
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=40.20 E-value=87 Score=30.51 Aligned_cols=92 Identities=14% Similarity=0.177 Sum_probs=47.1
Q ss_pred CchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhh-ccCCCceeEEEEecccccccccccCCCCccchhhhhh
Q psy3847 25 NSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFS-TWSVPQVEVSFYLADSVVEDVSWIPNKHYSGVYGLLK 101 (664)
Q Consensus 25 ~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~-~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~~~~~~~r 101 (664)
|....+..+|.|++...... +.+.|+.|..+ +...+.++ ....+..++.....+.. +-.|...-..
T Consensus 7 n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~-d~t~~~~~~~~~~~~~~v~~~~~~~~----------~~~g~~~a~n 75 (229)
T cd04192 7 NEAENLPRLLQSLSALDYPKEKFEVILVDDHST-DGTVQILEFAAAKPNFQLKILNNSRV----------SISGKKNALT 75 (229)
T ss_pred CcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCC-cChHHHHHHHHhCCCcceEEeeccCc----------ccchhHHHHH
Confidence 44788899999998877655 77777765432 22222222 11112233333333210 0011111111
Q ss_pred hccCCcCccccCeEEEEecceeecccHHH
Q psy3847 102 LTLPKVLPETLAKTIVLDTDVIFATDIAQ 130 (664)
Q Consensus 102 L~lp~iLP~~v~kvIyLD~Dilv~~di~e 130 (664)
..+... .-+-|+++|.|.++..|--+
T Consensus 76 ~g~~~~---~~d~i~~~D~D~~~~~~~l~ 101 (229)
T cd04192 76 TAIKAA---KGDWIVTTDADCVVPSNWLL 101 (229)
T ss_pred HHHHHh---cCCEEEEECCCcccCHHHHH
Confidence 112111 34789999999999765443
No 103
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=39.95 E-value=37 Score=33.46 Aligned_cols=38 Identities=24% Similarity=0.188 Sum_probs=30.7
Q ss_pred chhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHH
Q psy3847 547 PINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSS 584 (664)
Q Consensus 547 PiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~ 584 (664)
-+...||.|.+.|+.+|++.+|.|-++.++.-+.+...
T Consensus 71 G~~~a~N~g~~~a~gd~i~~lD~D~~~~~~~l~~~~~~ 108 (219)
T cd06913 71 GVGYAKNQAIAQSSGRYLCFLDSDDVMMPQRIRLQYEA 108 (219)
T ss_pred cHHHHHHHHHHhcCCCEEEEECCCccCChhHHHHHHHH
Confidence 46778999999999999999999988777655544333
No 104
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=39.43 E-value=23 Score=34.96 Aligned_cols=93 Identities=17% Similarity=0.164 Sum_probs=48.5
Q ss_pred ChhhHH-HHHHHhh-ccCCcEEEEEEeCch--hHHHHHHHH-hccccccccccEEEEEEeecCCC--CchhhHHHHHhhc
Q psy3847 486 SMDRLQ-MVEMLFK-HWEGPISLTLYMSDA--EAQQFLSYA-GNSEALRSRRNIGYHVVYKEGNF--YPINTLRNVALNQ 558 (664)
Q Consensus 486 s~drL~-~l~~l~~-~W~GPiS~av~~~~~--e~~~~~~~~-~~~~~~~~r~~v~~h~v~~~~~~--yPiN~LRNvA~~~ 558 (664)
.-+.|. .|+.+++ .| +++.+.|-..+. +..+.++.+ ...+ .+.++++...... ..-...+|.|+..
T Consensus 12 ~~~~l~~~l~sl~~~~~-~~~~v~vvd~~~~~~~~~~~~~~~~~~~------~~~v~vi~~~~~~g~~~k~~a~n~~~~~ 84 (228)
T PF13641_consen 12 EDDVLRRCLESLLAQDY-PRLEVVVVDDGSDDETAEILRALAARYP------RVRVRVIRRPRNPGPGGKARALNEALAA 84 (228)
T ss_dssp -HHHHHHHHHHHTTSHH-HTEEEEEEEE-SSS-GCTTHHHHHHTTG------G-GEEEEE----HHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCC-CCeEEEEEECCCChHHHHHHHHHHHHcC------CCceEEeecCCCCCcchHHHHHHHHHHh
Confidence 344444 3555554 35 677777655322 222223222 2221 2235555443212 2345567999999
Q ss_pred CCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 559 VSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 559 a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
+++++++++|.|.+|.++.-+.+.+..
T Consensus 85 ~~~d~i~~lD~D~~~~p~~l~~~~~~~ 111 (228)
T PF13641_consen 85 ARGDYILFLDDDTVLDPDWLERLLAAF 111 (228)
T ss_dssp ---SEEEEE-SSEEE-CHHHHHHHHHH
T ss_pred cCCCEEEEECCCcEECHHHHHHHHHHH
Confidence 999999999999999998877777766
No 105
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=38.91 E-value=17 Score=32.07 Aligned_cols=33 Identities=24% Similarity=0.201 Sum_probs=23.6
Q ss_pred CchhhhhhhcccccCccCCCeEEEEecceeeccCh-HHH
Q psy3847 191 SGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDI-AQL 228 (664)
Q Consensus 191 ~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI-~eL 228 (664)
+..+-++|+.+-...- =||+|+|+++..++ +.+
T Consensus 63 ~~~sD~~R~~~L~~~G-----GiY~D~D~~~~rpl~~~~ 96 (103)
T PF04488_consen 63 AHKSDLLRYLVLYKYG-----GIYLDLDVICLRPLDDPW 96 (103)
T ss_pred HHHHHHHHHHHHHHcC-----cEEEeCccccCcchhhhh
Confidence 3445566766644443 59999999999999 655
No 106
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=38.41 E-value=1.7e+02 Score=31.93 Aligned_cols=104 Identities=14% Similarity=0.183 Sum_probs=57.6
Q ss_pred CcceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCch---hHHHHHHHhhccCCCceeEEEEecccccccccc
Q psy3847 11 TCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTV---ALNILQTLFSTWSVPQVEVSFYLADSVVEDVSW 87 (664)
Q Consensus 11 ~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~---s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ 87 (664)
....+-|.+-+.|+ ...+..+|.|++...-..+.+.++.|+. +.+.++++.+.++ +.++.+..-.... .|
T Consensus 39 ~~p~VSViiP~~ne--e~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p--~~~i~~v~~~~~~---G~ 111 (373)
T TIGR03472 39 AWPPVSVLKPLHGD--EPELYENLASFCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFP--DADIDLVIDARRH---GP 111 (373)
T ss_pred CCCCeEEEEECCCC--ChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCC--CCceEEEECCCCC---CC
Confidence 34567888877665 7788999999998665457776655433 2445555555443 4444433211110 00
Q ss_pred cCCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHH
Q psy3847 88 IPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQ 130 (664)
Q Consensus 88 ip~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~e 130 (664)
+ .+...+... +... .-|=++.+|+|+++..|--+
T Consensus 112 --~---~K~~~l~~~-~~~a---~ge~i~~~DaD~~~~p~~L~ 145 (373)
T TIGR03472 112 --N---RKVSNLINM-LPHA---RHDILVIADSDISVGPDYLR 145 (373)
T ss_pred --C---hHHHHHHHH-HHhc---cCCEEEEECCCCCcChhHHH
Confidence 0 011222221 1111 34669999999999777544
No 107
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=37.43 E-value=94 Score=32.21 Aligned_cols=53 Identities=11% Similarity=-0.026 Sum_probs=38.3
Q ss_pred cEEEEEEeec-CCCCchhhHHHHHhhc-CCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 533 NIGYHVVYKE-GNFYPINTLRNVALNQ-VSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 533 ~v~~h~v~~~-~~~yPiN~LRNvA~~~-a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
.+.++++-+. +.=+-...|+|..... ++.+|++++|+|+.|.++.-..+....
T Consensus 66 ~~~v~~~~r~~~~g~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~ 120 (254)
T cd04191 66 QGRIYYRRRRENTGRKAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRM 120 (254)
T ss_pred CCcEEEEEcCCCCCccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHH
Confidence 4455555543 3446777888877653 789999999999999988766665554
No 108
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=36.36 E-value=34 Score=32.55 Aligned_cols=39 Identities=15% Similarity=0.153 Sum_probs=32.3
Q ss_pred CchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHH
Q psy3847 546 YPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSS 584 (664)
Q Consensus 546 yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~ 584 (664)
+-....+|.|+..++.+|++++|.|..+.++.-+.+.+.
T Consensus 66 ~G~~~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~ 104 (181)
T cd04187 66 FGQQAALLAGLDHARGDAVITMDADLQDPPELIPEMLAK 104 (181)
T ss_pred CCcHHHHHHHHHhcCCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 345677899999999999999999999988766666554
No 109
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=36.12 E-value=38 Score=31.98 Aligned_cols=38 Identities=13% Similarity=0.037 Sum_probs=32.7
Q ss_pred chhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHH
Q psy3847 547 PINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSS 584 (664)
Q Consensus 547 PiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~ 584 (664)
=....||.|+..|+++|++++|.|-.++++.-+.+...
T Consensus 66 G~~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 66 GKGAAVRAGFKAARGDIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred CccHHHHHHHHHhcCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 46789999999999999999999999888776666555
No 110
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=36.00 E-value=1.4e+02 Score=29.17 Aligned_cols=112 Identities=20% Similarity=0.315 Sum_probs=64.1
Q ss_pred cceEEEEEEEeCCC-chHHHHHHHHHHHhhC---------CCCeEEEEEe--CchhHHH-HHHHhhccCCCceeEEEEec
Q psy3847 12 CEVIQVAIVCAGYN-STRSLVTLIKSILFYR---------KNPLHFHLIT--DTVALNI-LQTLFSTWSVPQVEVSFYLA 78 (664)
Q Consensus 12 ~~~ihI~~v~~g~~-~~~~~~~~ikSil~~~---------~~~l~fhii~--d~~s~~~-l~~l~~~~~~~~~~~~fy~~ 78 (664)
-+.|-|++|++|.. --+.+...|.++=.+. +.+++-|++. ...+... .......-+..-+++.|--=
T Consensus 37 WkkiVVcIv~DGr~ki~~~tl~~L~~lGvyq~gi~k~~v~~k~v~aHifEyTtq~~i~~~~~~~~~~~~~~PvQ~ifclK 116 (163)
T PF01644_consen 37 WKKIVVCIVSDGRAKINPRTLDLLAALGVYQEGIAKNQVNGKPVTAHIFEYTTQLSIDSDLKFKGPEKNIVPVQIIFCLK 116 (163)
T ss_pred CcEEEEEEEecCcccCCHHHHHHHHHcCCCcchhhhhhcCCCcceeEEEEecccceecccccccccccCCCCEEEEEEec
Confidence 45899999999953 3455666666654332 2356677764 2221110 00000011222455554443
Q ss_pred ccccccccccCCCCccchhhhhhhccCCcCccccCeEEEEecceee-cccHHHHHHH
Q psy3847 79 DSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIF-ATDIAQLWAL 134 (664)
Q Consensus 79 ~~~~~~v~~ip~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv-~~di~eLw~~ 134 (664)
+....++ |+|..=.=++.|++=|++ ++.||+.+.= .++|-.||+.
T Consensus 117 e~N~kKi----nSHrWfFnaf~~~l~P~v-------cvllDvGT~P~~~siy~Lwka 162 (163)
T PF01644_consen 117 EKNAKKI----NSHRWFFNAFCRQLQPNV-------CVLLDVGTKPGKDSIYHLWKA 162 (163)
T ss_pred ccccccc----chhhHHHHHHHhhcCCcE-------EEEEecCCCcCchHHHHHHhh
Confidence 3333344 467666666777766665 8899999987 7788999986
No 111
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=35.97 E-value=1.9e+02 Score=33.34 Aligned_cols=106 Identities=16% Similarity=0.136 Sum_probs=65.9
Q ss_pred CCcEEEEEeeChh-------hHHHHHHHhhccCCcEEEEEEe-Cc-hh---HHHHHHHHhccccccccccEEEEEEeec-
Q psy3847 476 GNDVTLVAQLSMD-------RLQMVEMLFKHWEGPISLTLYM-SD-AE---AQQFLSYAGNSEALRSRRNIGYHVVYKE- 542 (664)
Q Consensus 476 ~~dVTLvTq~s~d-------rL~~l~~l~~~W~GPiS~av~~-~~-~e---~~~~~~~~~~~~~~~~r~~v~~h~v~~~- 542 (664)
...|+++.-++-. .|++++.+|-.-++.+.+.|-+ .+ .| +.++.+.+..... + -....+.++--.
T Consensus 246 ~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~-k-~~~~~i~~i~~~~ 323 (499)
T PF05679_consen 246 STRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTVVLFYDPSDSDSISQIKELLEELER-K-YPFSRIKWISVKT 323 (499)
T ss_pred CCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEEEEecCcccchhHHHHHHHHHHHHH-h-CCccceEEEEecC
Confidence 4788888887655 3567777776668887766443 22 22 2232223322110 0 023445556554
Q ss_pred CCCCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHH
Q psy3847 543 GNFYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKS 583 (664)
Q Consensus 543 ~~~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~ 583 (664)
|..--.-.|...|...-..+.+|++|+|+....++-...+.
T Consensus 324 ~~fsr~~~Ld~g~~~~~~d~L~f~~Dvd~~f~~~fL~rcR~ 364 (499)
T PF05679_consen 324 GEFSRGAALDVGAKKFPPDSLLFFCDVDMVFTSDFLNRCRM 364 (499)
T ss_pred CCccHHHHHHhhcccCCCCcEEEEEeCCcccCHHHHHHHHH
Confidence 66667777887777777889999999999877666555543
No 112
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=34.91 E-value=1.9e+02 Score=27.62 Aligned_cols=101 Identities=17% Similarity=0.105 Sum_probs=52.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCccchh
Q psy3847 18 AIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYSGVY 97 (664)
Q Consensus 18 ~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~~~~ 97 (664)
++.+.+......+..+|.|++.....+..+.|+.|+.+.+...++++.+... ..+.++...... |..
T Consensus 3 iip~~n~~~~~~l~~~l~Sl~~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~-~~i~~i~~~~n~------------G~~ 69 (201)
T cd04195 3 LMSVYIKEKPEFLREALESILKQTLPPDEVVLVKDGPVTQSLNEVLEEFKRK-LPLKVVPLEKNR------------GLG 69 (201)
T ss_pred EEEccccchHHHHHHHHHHHHhcCCCCcEEEEEECCCCchhHHHHHHHHHhc-CCeEEEEcCccc------------cHH
Confidence 3434332234578999999999776567776676665455555555544211 113433332211 111
Q ss_pred hhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 98 GLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 98 ~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
+-.-..+-. ..-+=+++||.|.++..+ +..+.+.
T Consensus 70 ~a~N~g~~~---a~gd~i~~lD~Dd~~~~~~l~~~~~~ 104 (201)
T cd04195 70 KALNEGLKH---CTYDWVARMDTDDISLPDRFEKQLDF 104 (201)
T ss_pred HHHHHHHHh---cCCCEEEEeCCccccCcHHHHHHHHH
Confidence 111111111 133568999999988554 4444444
No 113
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=34.22 E-value=60 Score=34.83 Aligned_cols=80 Identities=19% Similarity=0.314 Sum_probs=54.0
Q ss_pred hCCCCeEEEEEeCchhHHHHHHH---------hhccCCCceeEEEEecccccccccccCCCCccchhhhhhhccCCcCcc
Q psy3847 40 YRKNPLHFHLITDTVALNILQTL---------FSTWSVPQVEVSFYLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPE 110 (664)
Q Consensus 40 ~~~~~l~fhii~d~~s~~~l~~l---------~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~~~~~~~rL~lp~iLP~ 110 (664)
.+...+.|..++|+.+.+.++.- ...| .+..++.. |-..---..-+.|++.+.+||+
T Consensus 87 ~s~~~vcf~mF~D~~t~~~l~~~~~~~~~~~~ig~W-------rIv~v~~l-------p~~d~rr~~r~~K~lpHrlfp~ 152 (305)
T PF04765_consen 87 YSKKNVCFFMFVDEETLKSLESEGHIPDENKKIGIW-------RIVVVKNL-------PYDDPRRNGRIPKLLPHRLFPN 152 (305)
T ss_pred HHhcCccEEEEEehhhHHHHHhcCCccccccccCce-------EEEEecCC-------CCcchhhcCcccceeccccCCC
Confidence 34456889999999887766551 2233 33333321 1111111345679999999996
Q ss_pred ccCeEEEEecceeecccHHHHHHH
Q psy3847 111 TLAKTIVLDTDVIFATDIAQLWAL 134 (664)
Q Consensus 111 ~v~kvIyLD~Dilv~~di~eLw~~ 134 (664)
.+--||+|+-+.+..|+..|-..
T Consensus 153 -y~ySIWID~ki~L~~Dp~~lie~ 175 (305)
T PF04765_consen 153 -YDYSIWIDGKIQLIVDPLLLIER 175 (305)
T ss_pred -CceEEEEeeeEEEecCHHHHHHH
Confidence 69999999999999999887665
No 114
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=34.03 E-value=2e+02 Score=28.12 Aligned_cols=98 Identities=18% Similarity=0.160 Sum_probs=51.1
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCCCC--eEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCC
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRKNP--LHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKH 92 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~~~--l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~ 92 (664)
+-|++.+.+. -...+..+|+|++.-.-.. +.+.|+.|. +.+...++++++.... .+..+.... +..
T Consensus 3 vsviip~~n~-~~~~l~~~l~sl~~q~~~~~~~eiivvdd~-s~d~t~~~~~~~~~~~-~~~~~~~~~---------~~~ 70 (234)
T cd06421 3 VDVFIPTYNE-PLEIVRKTLRAALAIDYPHDKLRVYVLDDG-RRPELRALAAELGVEY-GYRYLTRPD---------NRH 70 (234)
T ss_pred eEEEEecCCC-cHHHHHHHHHHHHhcCCCcccEEEEEEcCC-CchhHHHHHHHhhccc-CceEEEeCC---------CCC
Confidence 4555555442 2355788999999755444 677776544 5555666666653211 122222211 111
Q ss_pred ccchhhhhhhccCCcCccccCeEEEEecceeecccHH
Q psy3847 93 YSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIA 129 (664)
Q Consensus 93 ~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~ 129 (664)
+ ..+-....+-.. .-+-+++||+|.++..|--
T Consensus 71 ~--~~~~~n~~~~~a---~~d~i~~lD~D~~~~~~~l 102 (234)
T cd06421 71 A--KAGNLNNALAHT---TGDFVAILDADHVPTPDFL 102 (234)
T ss_pred C--cHHHHHHHHHhC---CCCEEEEEccccCcCccHH
Confidence 1 111111111111 4578999999999966643
No 115
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=33.76 E-value=2.9e+02 Score=30.24 Aligned_cols=114 Identities=11% Similarity=0.128 Sum_probs=0.0
Q ss_pred CCCCCCCCCcceEEEEEEEeCCCchHHHHHHHHHHHhhCCC-CeEEEEEeCch---hHHHHHHHhhccCCCceeEEEEec
Q psy3847 3 SDEEPVIPTCEVIQVAIVCAGYNSTRSLVTLIKSILFYRKN-PLHFHLITDTV---ALNILQTLFSTWSVPQVEVSFYLA 78 (664)
Q Consensus 3 ~~~~~~~~~~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~-~l~fhii~d~~---s~~~l~~l~~~~~~~~~~~~fy~~ 78 (664)
+.+.+.++....+-|++.+.++ ...+..+|.|++...-. ++.+.++.|.. +.+.++++.+....+. ++.+.+.
T Consensus 30 ~~~~~~~~~~p~VSVIIpa~Ne--~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~-~i~vi~~ 106 (384)
T TIGR03469 30 PPQTPSPEAWPAVVAVVPARNE--ADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGD-RLTVVSG 106 (384)
T ss_pred CCCCCCCCCCCCEEEEEecCCc--HhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCC-cEEEecC
Q ss_pred ccccccccccCCCCccchhhhhhhccCCcCccc--cCeEEEEecceeeccc
Q psy3847 79 DSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPET--LAKTIVLDTDVIFATD 127 (664)
Q Consensus 79 ~~~~~~v~~ip~~~~~~~~~~~rL~lp~iLP~~--v~kvIyLD~Dilv~~d 127 (664)
+...+... |...-+...+...-... -+-++++|.|+.+..|
T Consensus 107 ~~~~~g~~--------Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~ 149 (384)
T TIGR03469 107 QPLPPGWS--------GKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPD 149 (384)
T ss_pred CCCCCCCc--------chHHHHHHHHHHHhccCCCCCEEEEECCCCCCChh
No 116
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=33.32 E-value=55 Score=33.87 Aligned_cols=40 Identities=23% Similarity=0.155 Sum_probs=32.4
Q ss_pred chhhHHHHHhhcC---CCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 547 PINTLRNVALNQV---STPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 547 PiN~LRNvA~~~a---~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
-+-..+|.+++.| .++||+++|-|-.|.++.-+.+.+...
T Consensus 57 G~a~a~N~Gi~~a~~~~~d~i~~lD~D~~~~~~~l~~l~~~~~ 99 (281)
T TIGR01556 57 GIAGAQNQGLDASFRRGVQGVLLLDQDSRPGNAFLAAQWKLLS 99 (281)
T ss_pred chHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH
Confidence 4456789888887 789999999999999877777766554
No 117
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=33.03 E-value=42 Score=33.95 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=31.1
Q ss_pred hhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 549 NTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 549 N~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
-..+|.|+..|+++|++++|.|..+.++.-+.+.+..
T Consensus 82 ~~a~n~g~~~a~g~~i~~lD~D~~~~~~~l~~l~~~~ 118 (243)
T PLN02726 82 GTAYIHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQ 118 (243)
T ss_pred HHHHHHHHHHcCCCEEEEEcCCCCCCHHHHHHHHHHH
Confidence 3578999999999999999999998887776666554
No 118
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=32.37 E-value=59 Score=39.84 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=27.9
Q ss_pred HHHHHhhcCCCCeEEEeecCcccCCCcHHHHHH
Q psy3847 551 LRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKS 583 (664)
Q Consensus 551 LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~ 583 (664)
-+|-|+..++.+||+++|+|.+|.++.-+.+..
T Consensus 330 nLN~aL~~a~GEyIavlDAD~ip~pdfL~~~V~ 362 (852)
T PRK11498 330 NINNALKYAKGEFVAIFDCDHVPTRSFLQMTMG 362 (852)
T ss_pred HHHHHHHhCCCCEEEEECCCCCCChHHHHHHHH
Confidence 468899999999999999999998877665544
No 119
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=32.24 E-value=1e+02 Score=31.36 Aligned_cols=96 Identities=17% Similarity=0.208 Sum_probs=0.0
Q ss_pred EEEEEeCCCch-HHHHHHHHHHHhhCCC----------CeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccc
Q psy3847 17 VAIVCAGYNST-RSLVTLIKSILFYRKN----------PLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDV 85 (664)
Q Consensus 17 I~~v~~g~~~~-~~~~~~ikSil~~~~~----------~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v 85 (664)
|++.+-++ . ..+..+|.|++...-. .+.+.||.|+.+.
T Consensus 1 v~ip~yNE--~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d----------------------------- 49 (244)
T cd04190 1 VCVTMYNE--DEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK----------------------------- 49 (244)
T ss_pred CEEeeecC--CHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc-----------------------------
Q ss_pred cccCCCCccchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHHhhhcccccccccc
Q psy3847 86 SWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWALFSRLRQRQTIGLV 147 (664)
Q Consensus 86 ~~ip~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~f~~~~~~~~~~~~ 147 (664)
..-....+..-+++.+...+.-..-+=|+.+|+|+++..| |.+++..|.. +..++|++
T Consensus 50 --~~~gk~~~~~~~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~--~p~vg~v~ 108 (244)
T cd04190 50 --KNRGKRDSQLWFFNYFCRVLFPDDPEFILLVDADTKFDPDSIVQLYKAMDK--DPEIGGVC 108 (244)
T ss_pred --ccCcchHHHHHHHHHHHHHhhcCCCCEEEEECCCCcCCHhHHHHHHHHHHh--CCCEEEEE
No 120
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=32.03 E-value=60 Score=39.02 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=28.5
Q ss_pred HHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 551 LRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 551 LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
-.|.|++.++.+|++++|+|.+|.++.-+.+....
T Consensus 219 nLN~al~~a~gd~Il~lDAD~v~~pd~L~~~v~~f 253 (713)
T TIGR03030 219 NINNALKHTDGELILIFDADHVPTRDFLQRTVGWF 253 (713)
T ss_pred HHHHHHHhcCCCEEEEECCCCCcChhHHHHHHHHH
Confidence 46999999999999999999999887655554433
No 121
>PRK10018 putative glycosyl transferase; Provisional
Probab=32.00 E-value=55 Score=34.51 Aligned_cols=42 Identities=14% Similarity=-0.045 Sum_probs=34.1
Q ss_pred CCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 545 FYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 545 ~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
---.-..||.|+..|+.+||+.+|.|-...++.-+.+.+...
T Consensus 70 n~G~~~a~N~gi~~a~g~~I~~lDaDD~~~p~~l~~~~~~~~ 111 (279)
T PRK10018 70 NSGACAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQ 111 (279)
T ss_pred CCCHHHHHHHHHHHcCCCEEEEECCCCCCCccHHHHHHHHHH
Confidence 344667899999999999999999999888886666655544
No 122
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=32.00 E-value=2.5e+02 Score=26.80 Aligned_cols=40 Identities=18% Similarity=0.094 Sum_probs=32.4
Q ss_pred CCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHH
Q psy3847 545 FYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSS 584 (664)
Q Consensus 545 ~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~ 584 (664)
-.-...-+|.|...++++||+++|.|-.+.++..+.+.+.
T Consensus 64 ~~G~~~~~n~g~~~~~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 64 NLGVARNFESLLQAADGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred CccHHHHHHHHHHhCCCCEEEEECCCcccChhHHHHHHHH
Confidence 3344667788999999999999999999888877777665
No 123
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=31.89 E-value=2.8e+02 Score=31.08 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=32.7
Q ss_pred hhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 548 INTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 548 iN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
-+..+|.|...++.+|++++|+|..|.++.-+.+.+..
T Consensus 143 ka~AlN~gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~ 180 (444)
T PRK14583 143 KAIALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPL 180 (444)
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCcCHHHHHHHHHHH
Confidence 57788999999999999999999999988766665544
No 124
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=31.72 E-value=2.1e+02 Score=27.50 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=47.7
Q ss_pred CchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCccc-hhhhhhhc
Q psy3847 25 NSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYSG-VYGLLKLT 103 (664)
Q Consensus 25 ~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~~-~~~~~rL~ 103 (664)
|-...+..+|.|++.....+..+.++.+ .+.+.....++.+.. ...+.+...... .+.+. ...-.+..
T Consensus 7 n~~~~l~~~l~sl~~q~~~~~eiiivD~-~s~d~t~~~~~~~~~-~~~i~~~~~~~n---------~g~~~~~n~~~~~a 75 (202)
T cd04185 7 NRLDLLKECLDALLAQTRPPDHIIVIDN-ASTDGTAEWLTSLGD-LDNIVYLRLPEN---------LGGAGGFYEGVRRA 75 (202)
T ss_pred CCHHHHHHHHHHHHhccCCCceEEEEEC-CCCcchHHHHHHhcC-CCceEEEECccc---------cchhhHHHHHHHHH
Confidence 4467889999999887655566655544 443334444444321 111233322211 11111 11112222
Q ss_pred cCCcCccccCeEEEEecceeecccHHH
Q psy3847 104 LPKVLPETLAKTIVLDTDVIFATDIAQ 130 (664)
Q Consensus 104 lp~iLP~~v~kvIyLD~Dilv~~di~e 130 (664)
. ....+-++++|.|.++..+.-+
T Consensus 76 ~----~~~~d~v~~ld~D~~~~~~~l~ 98 (202)
T cd04185 76 Y----ELGYDWIWLMDDDAIPDPDALE 98 (202)
T ss_pred h----ccCCCEEEEeCCCCCcChHHHH
Confidence 1 2356789999999999766443
No 125
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=31.66 E-value=5.5e+02 Score=27.96 Aligned_cols=51 Identities=12% Similarity=0.311 Sum_probs=42.0
Q ss_pred HHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEccee
Q psy3847 551 LRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFE 605 (664)
Q Consensus 551 LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE 605 (664)
.+|-+.....-+++.++|-|+.|++++.+.+.+.+..+. .++.++.|-++-
T Consensus 88 aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~----~D~~v~~ISa~N 138 (334)
T cd02514 88 ALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLE----EDPSLWCISAWN 138 (334)
T ss_pred HHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHh----cCCCEEEEEeec
Confidence 556666667899999999999999999999999988764 456788888873
No 126
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=30.78 E-value=2.6e+02 Score=26.72 Aligned_cols=93 Identities=17% Similarity=0.175 Sum_probs=52.6
Q ss_pred CCchHHHHHHHHHHHhhCCCCeEEEEEeCch---hHHHHHHHhhccCCCceeEEEEecccccccccccCCCCccchhhhh
Q psy3847 24 YNSTRSLVTLIKSILFYRKNPLHFHLITDTV---ALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYSGVYGLL 100 (664)
Q Consensus 24 ~~~~~~~~~~ikSil~~~~~~l~fhii~d~~---s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~~~~~~~ 100 (664)
.|....+..+|.|++.....++.+.|+.|+. +.+.++++....+ ..+.++.-+... |..+-.
T Consensus 7 yn~~~~l~~~l~sl~~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~---~~~~~~~~~~~~------------G~~~~~ 71 (214)
T cd04196 7 YNGEKYLREQLDSILAQTYKNDELIISDDGSTDGTVEIIKEYIDKDP---FIIILIRNGKNL------------GVARNF 71 (214)
T ss_pred cCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCC---ceEEEEeCCCCc------------cHHHHH
Confidence 3557888999999998776678888886644 2344444433321 233333332211 111111
Q ss_pred hhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 101 KLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 101 rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
...+ .-..-+-|++||.|.++..+ |.++++.
T Consensus 72 n~g~---~~~~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 72 ESLL---QAADGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred HHHH---HhCCCCEEEEECCCcccChhHHHHHHHH
Confidence 1111 11234779999999888666 7777665
No 127
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=30.51 E-value=46 Score=31.87 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=29.1
Q ss_pred hhHHHHHhhcC-----CCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 549 NTLRNVALNQV-----STPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 549 N~LRNvA~~~a-----~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
...+|.|+..+ +.++++++|+|..|.++.-..+.+...
T Consensus 65 ~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~ 107 (183)
T cd06438 65 GYALDFGFRHLLNLADDPDAVVVFDADNLVDPNALEELNARFA 107 (183)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHh
Confidence 34566666654 589999999999999888887776654
No 128
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=30.39 E-value=49 Score=32.41 Aligned_cols=38 Identities=13% Similarity=0.208 Sum_probs=32.7
Q ss_pred hhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 548 INTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 548 iN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
.-..+|.|+..|+.+|++++|.|..+.++..+.+.+.+
T Consensus 70 ~~~a~~~g~~~a~gd~i~~ld~D~~~~~~~l~~l~~~~ 107 (211)
T cd04188 70 KGGAVRAGMLAARGDYILFADADLATPFEELEKLEEAL 107 (211)
T ss_pred cHHHHHHHHHHhcCCEEEEEeCCCCCCHHHHHHHHHHH
Confidence 45788999999999999999999999988777776663
No 129
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=29.77 E-value=3.4e+02 Score=25.30 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=22.9
Q ss_pred CchHHHHHHHHHHHhhCCCCeEEEEEeCch
Q psy3847 25 NSTRSLVTLIKSILFYRKNPLHFHLITDTV 54 (664)
Q Consensus 25 ~~~~~~~~~ikSil~~~~~~l~fhii~d~~ 54 (664)
|....+..+|.|++.....+..+.++.|..
T Consensus 7 n~~~~l~~~l~sl~~q~~~~~eiivvdd~s 36 (182)
T cd06420 7 NRPEALELVLKSVLNQSILPFEVIIADDGS 36 (182)
T ss_pred CChHHHHHHHHHHHhccCCCCEEEEEeCCC
Confidence 457788999999998776667777776544
No 130
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=29.58 E-value=69 Score=34.38 Aligned_cols=48 Identities=23% Similarity=0.352 Sum_probs=39.1
Q ss_pred hhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhc-CCCcEEEEee
Q psy3847 195 GLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRL-RQRQTIGLVE 245 (664)
Q Consensus 195 ~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~-~~~~~~a~v~ 245 (664)
-+.|++...+|| +++--||+|+-+.+.+|+..|.+-+ + .++.-+|+..
T Consensus 140 r~~K~lpHrlfp-~y~ySIWID~ki~L~~Dp~~lie~~--l~~~~~~~Ai~~ 188 (305)
T PF04765_consen 140 RIPKLLPHRLFP-NYDYSIWIDGKIQLIVDPLLLIERF--LWRKNADIAISK 188 (305)
T ss_pred cccceeccccCC-CCceEEEEeeeEEEecCHHHHHHHH--HhcCCCcEEEeC
Confidence 467999999999 9999999999999999999887765 2 2455566654
No 131
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=29.44 E-value=51 Score=32.76 Aligned_cols=35 Identities=17% Similarity=0.168 Sum_probs=29.0
Q ss_pred HHHHHhhcCC--CCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 551 LRNVALNQVS--TPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 551 LRNvA~~~a~--T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
.+|.|++.+. ++|++++|.|.+++++.-..+....
T Consensus 73 a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~ 109 (236)
T cd06435 73 ALNYALERTAPDAEIIAVIDADYQVEPDWLKRLVPIF 109 (236)
T ss_pred HHHHHHHhcCCCCCEEEEEcCCCCcCHHHHHHHHHHh
Confidence 5899999875 7999999999999998777766554
No 132
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=28.29 E-value=1.3e+02 Score=27.43 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=27.0
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHH
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNI 58 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~ 58 (664)
+-|++ ...|....+..+|+|++........+.++ |+.|.+.
T Consensus 5 ~siii--p~~n~~~~l~~~l~s~~~q~~~~~eiivv-ddgs~d~ 45 (291)
T COG0463 5 VSVVI--PTYNEEEYLPEALESLLNQTYKDFEIIVV-DDGSTDG 45 (291)
T ss_pred EEEEE--eccchhhhHHHHHHHHHhhhhcceEEEEE-eCCCCCC
Confidence 34444 34566899999999999988776665444 4444333
No 133
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=27.93 E-value=1.4e+02 Score=29.19 Aligned_cols=91 Identities=15% Similarity=0.180 Sum_probs=47.3
Q ss_pred CchHHHHHHHHHHHhhCC-CCeEEEEEeCch---hHHHHHHHhhccCCCceeEEEEecccccccccccCCCCccchhhhh
Q psy3847 25 NSTRSLVTLIKSILFYRK-NPLHFHLITDTV---ALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYSGVYGLL 100 (664)
Q Consensus 25 ~~~~~~~~~ikSil~~~~-~~l~fhii~d~~---s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~~~~~~~ 100 (664)
|-...+..+|+|++.... ..+.+.++.|.. +.+.++++.++. -.+.++...... |.+.-.
T Consensus 7 n~~~~l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~~~~~~~~~~----~~i~~~~~~~n~------------G~~~a~ 70 (224)
T cd06442 7 NERENIPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEY----PRVRLIVRPGKR------------GLGSAY 70 (224)
T ss_pred chhhhHHHHHHHHHHhhcCCCeEEEEEeCCCCCChHHHHHHHHHhC----CceEEEecCCCC------------ChHHHH
Confidence 446678899999997665 458888886554 233334433332 123333332211 111111
Q ss_pred hhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 101 KLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 101 rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
..-+...- =+-|++||+|.++..+ +..+.+.
T Consensus 71 n~g~~~a~---gd~i~~lD~D~~~~~~~l~~l~~~ 102 (224)
T cd06442 71 IEGFKAAR---GDVIVVMDADLSHPPEYIPELLEA 102 (224)
T ss_pred HHHHHHcC---CCEEEEEECCCCCCHHHHHHHHHH
Confidence 11111111 1568999999888654 5555554
No 134
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=27.91 E-value=2e+02 Score=26.86 Aligned_cols=91 Identities=13% Similarity=0.157 Sum_probs=48.4
Q ss_pred CchHHHHHHHHHHHhhCC--CCeEEEEEeCch---hHHHHHHHhhccCCCceeEEEEecccccccccccCCCCccchhhh
Q psy3847 25 NSTRSLVTLIKSILFYRK--NPLHFHLITDTV---ALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYSGVYGL 99 (664)
Q Consensus 25 ~~~~~~~~~ikSil~~~~--~~l~fhii~d~~---s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~~~~~~ 99 (664)
+-...+..+|.|+..... .+..+.++.|.. +.+.++.....+. .. .++..+.. .|.++-
T Consensus 7 n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~--~~--~~~~~~~n------------~G~~~a 70 (185)
T cd04179 7 NEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVP--RV--RVIRLSRN------------FGKGAA 70 (185)
T ss_pred ChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCC--Ce--EEEEccCC------------CCccHH
Confidence 446778889999988764 457777776543 2444444433331 22 22222211 111111
Q ss_pred hhhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 100 LKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 100 ~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
....+...- -+=++.||+|..+..+ +.+|+..
T Consensus 71 ~n~g~~~a~---gd~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 71 VRAGFKAAR---GDIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred HHHHHHHhc---CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 111111111 1569999999988766 6666664
No 135
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=26.98 E-value=2.8e+02 Score=31.07 Aligned_cols=39 Identities=13% Similarity=0.040 Sum_probs=32.2
Q ss_pred hhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 548 INTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 548 iN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
--..+|.|++.++.+||+.+|.|..|.++.-+.+.+...
T Consensus 119 ka~AlN~gl~~s~g~~v~~~DaD~~~~~d~L~~l~~~f~ 157 (439)
T TIGR03111 119 KAKALNAAIYNSIGKYIIHIDSDGKLHKDAIKNMVTRFE 157 (439)
T ss_pred HHHHHHHHHHHccCCEEEEECCCCCcChHHHHHHHHHHH
Confidence 345669999999999999999999999887777666553
No 136
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=26.92 E-value=4.1e+02 Score=25.50 Aligned_cols=49 Identities=6% Similarity=0.099 Sum_probs=30.8
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchh---HHHHHHHhhc
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVA---LNILQTLFST 65 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s---~~~l~~l~~~ 65 (664)
+-|++.+- |-...+..+|+|++.....++.+.++.|+.+ .+.++++...
T Consensus 3 vsviip~~--n~~~~l~~~L~sl~~q~~~~~eiivVdd~s~d~t~~~~~~~~~~ 54 (196)
T cd02520 3 VSILKPLC--GVDPNLYENLESFFQQDYPKYEILFCVQDEDDPAIPVVRKLIAK 54 (196)
T ss_pred eEEEEecC--CCCccHHHHHHHHHhccCCCeEEEEEeCCCcchHHHHHHHHHHH
Confidence 44555554 4466788999999986555577777776543 3444444443
No 137
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=26.57 E-value=2.6e+02 Score=27.99 Aligned_cols=102 Identities=12% Similarity=0.007 Sum_probs=51.8
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCCC--CeEEEEEeCchhHHHHHHHhhccCCC-ceeEEEEecccccccccccCCC
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRKN--PLHFHLITDTVALNILQTLFSTWSVP-QVEVSFYLADSVVEDVSWIPNK 91 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~~--~l~fhii~d~~s~~~l~~l~~~~~~~-~~~~~fy~~~~~~~~v~~ip~~ 91 (664)
+-|++.+- |-...+..+|+|++...-. .+.+.++.|+. .+.-.++++.+..+ +.++.... +.
T Consensus 3 vsIiIp~~--Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s-~d~t~~i~~~~~~~~~~~i~~~~------------~~ 67 (241)
T cd06427 3 YTILVPLY--KEAEVLPQLIASLSALDYPRSKLDVKLLLEED-DEETIAAARALRLPSIFRVVVVP------------PS 67 (241)
T ss_pred EEEEEecC--CcHHHHHHHHHHHHhCcCCcccEEEEEEECCC-CchHHHHHHHhccCCCeeEEEec------------CC
Confidence 44555554 4467889999999874432 26666665543 33334445554321 22332221 11
Q ss_pred CccchhhhhhhccCCcCccccCeEEEEecceeecccHH-HHHHH
Q psy3847 92 HYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIA-QLWAL 134 (664)
Q Consensus 92 ~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~-eLw~~ 134 (664)
...|.+.-....+... .=+=|+++|.|.++-.|-- ++-..
T Consensus 68 ~~~G~~~a~n~g~~~a---~gd~i~~~DaD~~~~~~~l~~~~~~ 108 (241)
T cd06427 68 QPRTKPKACNYALAFA---RGEYVVIYDAEDAPDPDQLKKAVAA 108 (241)
T ss_pred CCCchHHHHHHHHHhc---CCCEEEEEcCCCCCChHHHHHHHHH
Confidence 1112222222222222 2266999999999865543 44443
No 138
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=26.44 E-value=6.6e+02 Score=25.08 Aligned_cols=102 Identities=8% Similarity=0.095 Sum_probs=49.8
Q ss_pred eEEEEEEEeCCCchHHHHHHHHHHHhhCCC--CeEEEEEeCch---hHHHHHHHhhccCCCceeEEEEeccccccccccc
Q psy3847 14 VIQVAIVCAGYNSTRSLVTLIKSILFYRKN--PLHFHLITDTV---ALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWI 88 (664)
Q Consensus 14 ~ihI~~v~~g~~~~~~~~~~ikSil~~~~~--~l~fhii~d~~---s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~i 88 (664)
.+.|++.+- |-...+..++.++....+. ++.+.++.|.. +.+.++++.+.+.. ..+..+....
T Consensus 10 ~vsVvIp~y--ne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~--~~v~~~~~~~-------- 77 (243)
T PLN02726 10 KYSIIVPTY--NERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGE--DRILLRPRPG-------- 77 (243)
T ss_pred eEEEEEccC--CchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCC--CcEEEEecCC--------
Confidence 456666554 4466666677776543332 57777776543 24444444333321 2223222111
Q ss_pred CCCCccchhhhhhhccCCcCccccCeEEEEecceeecc-cHHHHHHH
Q psy3847 89 PNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFAT-DIAQLWAL 134 (664)
Q Consensus 89 p~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~-di~eLw~~ 134 (664)
..|..+-....+... .-+=++++|+|..+.. .+.+|++.
T Consensus 78 ----n~G~~~a~n~g~~~a---~g~~i~~lD~D~~~~~~~l~~l~~~ 117 (243)
T PLN02726 78 ----KLGLGTAYIHGLKHA---SGDFVVIMDADLSHHPKYLPSFIKK 117 (243)
T ss_pred ----CCCHHHHHHHHHHHc---CCCEEEEEcCCCCCCHHHHHHHHHH
Confidence 111111111111111 2367899999998743 45666665
No 139
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=25.69 E-value=61 Score=31.90 Aligned_cols=104 Identities=21% Similarity=0.234 Sum_probs=50.8
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchh---HHHHHHHhhccCCCceeEEEEecccccccccccCCC
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVA---LNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNK 91 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s---~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~ 91 (664)
|-|++.+. +-...+..+|.|++.....++++++++|... .+.+.++...+. +..+.+........
T Consensus 3 v~Vvip~~--~~~~~l~~~l~sl~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~--~~~v~vi~~~~~~g-------- 70 (228)
T PF13641_consen 3 VSVVIPAY--NEDDVLRRCLESLLAQDYPRLEVVVVDDGSDDETAEILRALAARYP--RVRVRVIRRPRNPG-------- 70 (228)
T ss_dssp EEEE--BS--S-HHHHHHHHHHHTTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTG--G-GEEEEE----HH--------
T ss_pred EEEEEEec--CCHHHHHHHHHHHHcCCCCCeEEEEEECCCChHHHHHHHHHHHHcC--CCceEEeecCCCCC--------
Confidence 44555444 4477899999999975445688888885442 334555555553 33344433321100
Q ss_pred CccchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 92 HYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 92 ~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
..+...-....+... .-+-|++||.|+++..| +.++...
T Consensus 71 -~~~k~~a~n~~~~~~---~~d~i~~lD~D~~~~p~~l~~~~~~ 110 (228)
T PF13641_consen 71 -PGGKARALNEALAAA---RGDYILFLDDDTVLDPDWLERLLAA 110 (228)
T ss_dssp -HHHHHHHHHHHHHH------SEEEEE-SSEEE-CHHHHHHHHH
T ss_pred -cchHHHHHHHHHHhc---CCCEEEEECCCcEECHHHHHHHHHH
Confidence 001111111222211 25789999999999655 4444554
No 140
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=24.34 E-value=2.6e+02 Score=27.55 Aligned_cols=38 Identities=13% Similarity=0.242 Sum_probs=24.8
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCC--CCeEEEEEeCch
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRK--NPLHFHLITDTV 54 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~--~~l~fhii~d~~ 54 (664)
+.|++.+- |....+..+|.|++.... ....+.++.++.
T Consensus 2 ~sIiip~~--n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s 41 (249)
T cd02525 2 VSIIIPVR--NEEKYIEELLESLLNQSYPKDLIEIIVVDGGS 41 (249)
T ss_pred EEEEEEcC--CchhhHHHHHHHHHhccCCCCccEEEEEeCCC
Confidence 44555554 446778899999987655 346676665443
No 141
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=24.24 E-value=4e+02 Score=30.60 Aligned_cols=109 Identities=13% Similarity=0.284 Sum_probs=61.2
Q ss_pred CCCCCcceEEEEEEEeCC--CchHHHHHHHHHHHhhCCCCeEEEEEe--Cch---hH----HHHHHHhhccCCCceeEEE
Q psy3847 7 PVIPTCEVIQVAIVCAGY--NSTRSLVTLIKSILFYRKNPLHFHLIT--DTV---AL----NILQTLFSTWSVPQVEVSF 75 (664)
Q Consensus 7 ~~~~~~~~ihI~~v~~g~--~~~~~~~~~ikSil~~~~~~l~fhii~--d~~---s~----~~l~~l~~~~~~~~~~~~f 75 (664)
+..++..+|||++-++|. ............++..++...++-++. +.. .. +.+.++-+.+ +..++.+
T Consensus 241 ~~~~~~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~--~~~~i~~ 318 (499)
T PF05679_consen 241 PYVTESTRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTVVLFYDPSDSDSISQIKELLEELERKY--PFSRIKW 318 (499)
T ss_pred ccccCCCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEEEEecCcccchhHHHHHHHHHHHHHhC--CccceEE
Confidence 445567899999999884 234445666666766666654444433 311 11 2333333333 3444454
Q ss_pred EecccccccccccCCCCccchhhhhhhccCCcCccccCeEEEEecceeecccHHH
Q psy3847 76 YLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQ 130 (664)
Q Consensus 76 y~~~~~~~~v~~ip~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~e 130 (664)
..+.. .-++-+..+.+.+..+=++ +=+++.|.|+.|..|+-+
T Consensus 319 i~~~~-----------~~fsr~~~Ld~g~~~~~~d--~L~f~~Dvd~~f~~~fL~ 360 (499)
T PF05679_consen 319 ISVKT-----------GEFSRGAALDVGAKKFPPD--SLLFFCDVDMVFTSDFLN 360 (499)
T ss_pred EEecC-----------CCccHHHHHHhhcccCCCC--cEEEEEeCCcccCHHHHH
Confidence 44430 3344444555555544233 347788999999998876
No 142
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=23.95 E-value=74 Score=30.00 Aligned_cols=69 Identities=20% Similarity=0.293 Sum_probs=38.8
Q ss_pred EEEEEeCchh----HHHHHHHHhccccccccccEEEEEEeec-CCCCchh--hHHHHHhhcCC----CCeEEEeecCccc
Q psy3847 505 SLTLYMSDAE----AQQFLSYAGNSEALRSRRNIGYHVVYKE-GNFYPIN--TLRNVALNQVS----TPYVFLLDIDFLP 573 (664)
Q Consensus 505 S~av~~~~~e----~~~~~~~~~~~~~~~~r~~v~~h~v~~~-~~~yPiN--~LRNvA~~~a~----T~~v~~~DiD~~P 573 (664)
.+||-+|=.+ +..++.++.. . ..|+.+.+++..-+ ..-.|.| .|-|++-..|. -+.+.+-|||++|
T Consensus 48 kvAiIIPyRdR~~hL~~fl~~l~~--~-L~rQ~~~y~I~vieQ~~~~~FNRg~L~NvGf~eA~~~~~~dc~ifHDVDllP 124 (136)
T PF13733_consen 48 KVAIIIPYRDREEHLRIFLPHLHP--F-LQRQQLDYRIFVIEQVDNGPFNRGKLMNVGFLEALKDDDFDCFIFHDVDLLP 124 (136)
T ss_dssp EEEEEEEESS-HHHHHHHHHHHHH--H-HHHTT-EEEEEEEEE-SSS---HHHHHHHHHHHHHHHS--SEEEEE-TTEEE
T ss_pred ceEEEEEeCCHHHHHHHHHHHHHH--H-HhhCcceEEEEEEeeccCCCCchhhhhhHHHHHHhhccCCCEEEEecccccc
Confidence 7888887543 2334443322 2 23567777766532 2345666 57898776653 3788889999999
Q ss_pred CCC
Q psy3847 574 MFG 576 (664)
Q Consensus 574 s~~ 576 (664)
-.+
T Consensus 125 ~~~ 127 (136)
T PF13733_consen 125 END 127 (136)
T ss_dssp SBT
T ss_pred cCC
Confidence 753
No 143
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=23.31 E-value=2.6e+02 Score=30.53 Aligned_cols=50 Identities=14% Similarity=0.147 Sum_probs=35.7
Q ss_pred EEEEEeec---CCCCchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHH
Q psy3847 535 GYHVVYKE---GNFYPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSI 585 (664)
Q Consensus 535 ~~h~v~~~---~~~yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~ 585 (664)
.++++... |.-.-+|.+.|. .+.|+.++++++|.|..|.++.-+.+.+..
T Consensus 99 ~i~~v~~~~~~G~~~K~~~l~~~-~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~ 151 (373)
T TIGR03472 99 DIDLVIDARRHGPNRKVSNLINM-LPHARHDILVIADSDISVGPDYLRQVVAPL 151 (373)
T ss_pred ceEEEECCCCCCCChHHHHHHHH-HHhccCCEEEEECCCCCcChhHHHHHHHHh
Confidence 34555332 333456778774 678999999999999999988776665544
No 144
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=23.02 E-value=4.9e+02 Score=31.30 Aligned_cols=111 Identities=13% Similarity=0.138 Sum_probs=60.2
Q ss_pred CcceEEEEEEEeCCCch---HHHHHHHHHHHhh-CCCCeEEEEEeCchhHH-------HHHHHhhccCCCceeEEEEecc
Q psy3847 11 TCEVIQVAIVCAGYNST---RSLVTLIKSILFY-RKNPLHFHLITDTVALN-------ILQTLFSTWSVPQVEVSFYLAD 79 (664)
Q Consensus 11 ~~~~ihI~~v~~g~~~~---~~~~~~ikSil~~-~~~~l~fhii~d~~s~~-------~l~~l~~~~~~~~~~~~fy~~~ 79 (664)
....+-|++-++++.-. ..+..++.|+..- ....+.|++++|....+ .+.++.+.+.. +.++.+..-.
T Consensus 122 ~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~-~~~i~yr~R~ 200 (691)
T PRK05454 122 PEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGG-EGRIFYRRRR 200 (691)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCcEEEEECC
Confidence 34467777777775322 3467778888864 34569999998765322 13344444421 2233321111
Q ss_pred cccccccccCCCCccchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 80 SVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 80 ~~~~~v~~ip~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
... +..-.++..+.|..- ...+-++.||+|.++..| +.++-..
T Consensus 201 ~n~-------~~KaGNl~~~~~~~~-----~~~eyivvLDADs~m~~d~L~~lv~~ 244 (691)
T PRK05454 201 RNV-------GRKAGNIADFCRRWG-----GAYDYMVVLDADSLMSGDTLVRLVRL 244 (691)
T ss_pred cCC-------CccHHHHHHHHHhcC-----CCcCEEEEEcCCCCCCHHHHHHHHHH
Confidence 100 011112233333221 346889999999999888 5666554
No 145
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=21.46 E-value=1.9e+02 Score=30.83 Aligned_cols=119 Identities=13% Similarity=0.119 Sum_probs=76.7
Q ss_pred ccceeeeecccccCCCCCchhhhhhhhhhhhhhhhcCCCCcccccccCCCCcEEEEEeeCh--hhHHH-HHHHhhccC--
Q psy3847 427 RTHLYFLEYEYEASSDGNDVTLVAQLSMDRLQMVEINPNNVDEYEASSDGNDVTLVAQLSM--DRLQM-VEMLFKHWE-- 501 (664)
Q Consensus 427 Rt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVTLvTq~s~--drL~~-l~~l~~~W~-- 501 (664)
++-+++-+..+ + +.++.|+|.+-..+..|+ .+.++++..... .+.+.++||.|+ |-... +..+-++.+
T Consensus 115 ~~iIliG~~gH---p--Ev~Gt~Gq~~~~~~~lve-~~~d~~~l~~~~-~~~l~~~tQTTls~ddt~~Iv~~l~~r~p~~ 187 (294)
T COG0761 115 YEIILIGHKGH---P--EVIGTMGQYPEGGVLLVE-SVEDVANLKVQL-PDKLAFVTQTTLSVDDTAEIVAALKERFPKI 187 (294)
T ss_pred CEEEEEccCCC---C--ceeeeccccCCCceEEEe-cHHHHHhcccCC-cccEEEEeeeecCHHHHHHHHHHHHHhCccc
Confidence 44455555444 3 367888998887666555 455566655333 338999999876 44444 445555554
Q ss_pred -CcEEEEEEeCchhHHHHHHHHhccccccccccEEEEEEeecCCCCchhhHHHHHhhcCC
Q psy3847 502 -GPISLTLYMSDAEAQQFLSYAGNSEALRSRRNIGYHVVYKEGNFYPINTLRNVALNQVS 560 (664)
Q Consensus 502 -GPiS~av~~~~~e~~~~~~~~~~~~~~~~r~~v~~h~v~~~~~~yPiN~LRNvA~~~a~ 560 (664)
+|.+=.|...-...|.+++.+.. .+++-+|.-....-=.|.|+=+|.+...
T Consensus 188 ~~~~~~~ICyAT~nRQ~Avk~la~--------~~Dl~iVVG~~nSSNs~rL~eiA~~~g~ 239 (294)
T COG0761 188 EVPPFNDICYATQNRQDAVKELAP--------EVDLVIVVGSKNSSNSNRLAEIAKRHGK 239 (294)
T ss_pred cCCcccccchhhhhHHHHHHHHhh--------cCCEEEEECCCCCccHHHHHHHHHHhCC
Confidence 77776666655566666655532 3556677766566677899999999887
No 146
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=20.90 E-value=49 Score=33.49 Aligned_cols=94 Identities=19% Similarity=0.275 Sum_probs=51.0
Q ss_pred ccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhccccccCCCCCCCCCceeEEEEEEechh
Q psy3847 201 LPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFNTGVILLDLTK 280 (664)
Q Consensus 201 lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~~~~~~~~~p~~~~yfNSGVmLinL~~ 280 (664)
+..+|| .++-||+||+|+-|...=.-+=+ + +.++.-+-. |. +...| -+.||--|+-...
T Consensus 35 va~~L~-~~~~vlflDaDigVvNp~~~iEe-f--id~~~Di~f-------yd-----R~~n~-----Ei~agsYlvkNT~ 93 (222)
T PF03314_consen 35 VAKILP-EYDWVLFLDADIGVVNPNRRIEE-F--IDEGYDIIF-------YD-----RFFNW-----EIAAGSYLVKNTE 93 (222)
T ss_pred HHHHhc-cCCEEEEEcCCceeecCcccHHH-h--cCCCCcEEE-------Ee-----cccch-----hhhhccceeeCCH
Confidence 455677 78999999999999876333311 1 222221111 11 11112 2556655554444
Q ss_pred HHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcC
Q psy3847 281 LRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEH 319 (664)
Q Consensus 281 ~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~ 319 (664)
|-. +|-+.|.++-.+ + .......|-.+|..++.++
T Consensus 94 ~~~-~fl~~~a~~E~~-l--P~sfhGtDNGAlH~~L~e~ 128 (222)
T PF03314_consen 94 YSR-DFLKEWADYEFK-L--PNSFHGTDNGALHIFLAEK 128 (222)
T ss_pred HHH-HHHHHHhhhCcc-C--CCccccCccHHHHHHHHHH
Confidence 332 344455444211 1 2345688999999998876
No 147
>PRK10073 putative glycosyl transferase; Provisional
Probab=20.72 E-value=3.2e+02 Score=29.37 Aligned_cols=39 Identities=15% Similarity=0.330 Sum_probs=29.4
Q ss_pred eEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCch
Q psy3847 14 VIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTV 54 (664)
Q Consensus 14 ~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~ 54 (664)
.+.|++.+ .|....+..+|.|++..+-.++.+.++.|+.
T Consensus 7 ~vSVIIP~--yN~~~~L~~~l~Sl~~Qt~~~~EIIiVdDgS 45 (328)
T PRK10073 7 KLSIIIPL--YNAGKDFRAFMESLIAQTWTALEIIIVNDGS 45 (328)
T ss_pred eEEEEEec--cCCHHHHHHHHHHHHhCCCCCeEEEEEeCCC
Confidence 46666655 4567889999999998776678888887654
No 148
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=20.42 E-value=4.4e+02 Score=27.35 Aligned_cols=36 Identities=19% Similarity=0.267 Sum_probs=23.8
Q ss_pred EEEEEeCCCch-HHHHHHHHHHHhhCCCC--eEEEEEeCch
Q psy3847 17 VAIVCAGYNST-RSLVTLIKSILFYRKNP--LHFHLITDTV 54 (664)
Q Consensus 17 I~~v~~g~~~~-~~~~~~ikSil~~~~~~--l~fhii~d~~ 54 (664)
|++.+- |.. ..+..+|.||+..+... ..+.++.|..
T Consensus 2 IIIp~~--N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S 40 (299)
T cd02510 2 VIIIFH--NEALSTLLRTVHSVINRTPPELLKEIILVDDFS 40 (299)
T ss_pred EEEEEe--cCcHHHHHHHHHHHHhcCchhcCCEEEEEECCC
Confidence 344443 446 88899999999876654 3666665544
Done!