Query psy3847
Match_columns 664
No_of_seqs 388 out of 1623
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 18:56:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3847.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3847hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tzt_A Glycosyl transferase fa 100.0 1.9E-41 6.5E-46 353.1 17.3 259 14-383 5-271 (276)
2 1g9r_A Glycosyl transferase; a 100.0 1.7E-37 5.8E-42 328.6 19.1 255 15-381 1-269 (311)
3 1ll2_A Glycogenin-1; protein-s 99.9 2.3E-25 7.8E-30 237.6 12.8 141 193-366 81-223 (333)
4 3u2u_A Glycogenin-1, GN-1, GN1 99.9 1.5E-24 5.1E-29 223.5 13.8 140 194-366 83-224 (263)
5 3tzt_A Glycosyl transferase fa 98.9 1.6E-09 5.5E-14 112.2 6.8 103 12-148 33-135 (276)
6 1g9r_A Glycosyl transferase; a 98.6 2.9E-08 9.8E-13 104.4 7.5 101 13-147 29-129 (311)
7 1ll2_A Glycogenin-1; protein-s 96.7 0.00036 1.2E-08 73.9 1.2 111 14-134 4-117 (333)
8 3u2u_A Glycogenin-1, GN-1, GN1 95.5 0.0037 1.3E-07 63.9 1.7 104 20-134 10-118 (263)
9 3ioh_A Histo-blood group ABO s 82.2 47 0.0016 33.9 17.1 42 12-54 57-100 (298)
10 1o7q_A N-acetyllactosaminide a 79.9 56 0.0019 33.2 20.3 115 208-335 138-263 (289)
11 4ayl_A BOGT-metal-independent 77.6 58 0.002 32.4 15.0 119 208-334 87-216 (246)
12 1qg8_A Protein (spore coat pol 72.1 28 0.00096 33.4 11.5 42 546-587 74-115 (255)
13 3bcv_A Putative glycosyltransf 71.7 3.1 0.00011 40.0 4.3 42 546-587 70-111 (240)
14 3lw6_A FI08434P, beta-4-galact 71.7 5.3 0.00018 40.7 6.0 101 473-576 12-129 (287)
15 2z86_A Chondroitin synthase; G 70.2 15 0.0005 41.2 10.1 102 478-587 96-201 (625)
16 2nxv_A ATP synthase subunits r 67.6 33 0.0011 33.5 10.9 41 547-587 61-101 (249)
17 1xhb_A Polypeptide N-acetylgal 60.8 9 0.00031 41.4 5.7 54 546-606 100-153 (472)
18 1qg8_A Protein (spore coat pol 58.5 25 0.00085 33.8 8.0 109 15-134 3-112 (255)
19 2fy7_A Beta-1,4-galactosyltran 57.9 14 0.00046 37.7 6.1 34 544-577 109-146 (287)
20 2ffu_A Ppgalnact-2, polypeptid 57.1 9.9 0.00034 41.5 5.3 54 546-606 132-185 (501)
21 2d7i_A Polypeptide N-acetylgal 49.1 12 0.0004 41.9 4.2 54 546-606 182-235 (570)
22 2p6w_A VP54, putative glycosyl 45.8 13 0.00045 35.6 3.3 80 267-360 118-200 (213)
23 3ckj_A Putative uncharacterize 43.2 22 0.00075 36.4 4.9 52 548-605 119-171 (329)
24 2ffu_A Ppgalnact-2, polypeptid 43.1 41 0.0014 36.5 7.4 101 13-134 66-170 (501)
25 3bcv_A Putative glycosyltransf 39.6 70 0.0024 30.1 7.7 99 14-134 6-108 (240)
26 2d7i_A Polypeptide N-acetylgal 39.1 57 0.002 36.2 7.9 102 13-134 112-220 (570)
27 1xhb_A Polypeptide N-acetylgal 35.0 1.1E+02 0.0037 32.6 9.1 102 13-134 29-138 (472)
28 1fo8_A Alpha-1,3-mannosyl-glyc 24.9 47 0.0016 34.7 3.7 118 15-134 2-122 (343)
29 2z86_A Chondroitin synthase; G 22.2 56 0.0019 36.3 4.0 40 547-586 441-480 (625)
No 1
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=100.00 E-value=1.9e-41 Score=353.06 Aligned_cols=259 Identities=17% Similarity=0.160 Sum_probs=182.2
Q ss_pred eEEEEEEEeCCCchHHHHHHHHHHHhhCCC-CeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCC
Q psy3847 14 VIQVAIVCAGYNSTRSLVTLIKSILFYRKN-PLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKH 92 (664)
Q Consensus 14 ~ihI~~v~~g~~~~~~~~~~ikSil~~~~~-~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~ 92 (664)
+|||++. +|.+|.++++++|+||+.|++. +++||+++++++.+..+.+-+.+...++++.+++++.. .++
T Consensus 5 ~i~I~~~-~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~--~~~------ 75 (276)
T 3tzt_A 5 ADALLLT-LDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDD--LFS------ 75 (276)
T ss_dssp CEEEEEE-CCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC-------------
T ss_pred eEEEEEE-eCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHH--HHh------
Confidence 5999974 4669999999999999999984 79999999988766555444333334678888887631 010
Q ss_pred ccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCccCccc
Q psy3847 93 YSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGF 172 (664)
Q Consensus 93 ~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~ 172 (664)
T Consensus 76 -------------------------------------------------------------------------------- 75 (276)
T 3tzt_A 76 -------------------------------------------------------------------------------- 75 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccCCCCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhh
Q psy3847 173 YLADSVVEDVSWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYL 252 (664)
Q Consensus 173 ~~~~~~~~~vs~ip~~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~ 252 (664)
.+|.+.+.+..+|+||++|+++|++++||||||+|++|++||++||+++ + ++..+|||+|+.....
T Consensus 76 -----------~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~d--l-~~~~~aav~d~~~~~~ 141 (276)
T 3tzt_A 76 -----------FAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTD--I-SDYILAAASHTGKTDM 141 (276)
T ss_dssp -------------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCC--C-TTSSEEEEEC------
T ss_pred -----------cCccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcC--C-CCCeEEEEEecccchH
Confidence 0111112357899999999999988999999999999999999999996 5 4567888887653211
Q ss_pred ccccccCCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEEeCC-ccc
Q psy3847 253 GKLWKNHKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYTLPC-QWN 331 (664)
Q Consensus 253 ~~~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~Lp~-~wN 331 (664)
... .+..+++..+.|||||||||||++||+.++.+++.++++++ ...+.++|||+||.+|+++ ++.||+ +||
T Consensus 142 ~~~-~~~~~l~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~---~~~~~~~DQd~LN~~f~~~---~~~Lp~~~wN 214 (276)
T 3tzt_A 142 ANN-VNRIRLGTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDN---HMNLLLPDQDILNAMYGDR---IYPLDDLIYN 214 (276)
T ss_dssp ---------------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC-----------CHHHHHHHGGG---EEEEEHHHHS
T ss_pred HHH-HHHhcCCCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhc---cccccCCChhHHHHHHhCC---EEECCchhee
Confidence 100 01223333347999999999999999999999999888765 3456799999999999999 999999 999
Q ss_pred cccCCCCCC------hhhhhhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHhcc
Q psy3847 332 VQLSDNTRS------DELCYTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLEYD 383 (664)
Q Consensus 332 ~q~~~~~~~------~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~~~ 383 (664)
++.+..... ........++++||||+|+.|||...+ .++|+++|+.|.++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~-~~~~~~~w~~Y~~~~ 271 (276)
T 3tzt_A 215 YDARNYSSYLIRSKKQADLAWLMDHTVVLHFCGRDKPWKKNH-RNKFTSLYKHYMSLT 271 (276)
T ss_dssp EETTCHHHHHHHTTTCCSHHHHHHHCCEEECCSSCCTTSTTC-CSTTHHHHHHHHHHH
T ss_pred eecccchhhhccccchhhhhhhccCCeEEEECCCCCCcCCCC-CCchHHHHHHHHHHH
Confidence 997432110 001112356799999999999999876 789999999999874
No 2
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=100.00 E-value=1.7e-37 Score=328.58 Aligned_cols=255 Identities=16% Similarity=0.189 Sum_probs=186.9
Q ss_pred EEEEEEEeCCCchHHHHHHHHHH-HhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCc
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSI-LFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHY 93 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSi-l~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~ 93 (664)
|||++++ |.+|.+++.++++|| +.|++.+++||+++++++.+..+.+-+.....++++.+++++.. .+
T Consensus 1 m~I~~~~-d~~Y~~~~~vli~Sl~l~~~~~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~--~~-------- 69 (311)
T 1g9r_A 1 MDIVFAA-DDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPE--DF-------- 69 (311)
T ss_dssp CEEEEEE-CGGGHHHHHHHHHHHHHTCTTSCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEECCGG--GG--------
T ss_pred CeEEEEC-CHhHHHHHHHHHHHHHHHcCCCCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEcCHH--HH--------
Confidence 6899865 559999999999999 99988889999999987765544433322222556666665421 00
Q ss_pred cchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccccchhHHHHhhhhccccCCccCcccc
Q psy3847 94 SGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFY 173 (664)
Q Consensus 94 ~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~ 173 (664)
T Consensus 70 -------------------------------------------------------------------------------- 69 (311)
T 1g9r_A 70 -------------------------------------------------------------------------------- 69 (311)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccCC-CCCCchhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhh
Q psy3847 174 LADSVVEDVSWIPN-KHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYL 252 (664)
Q Consensus 174 ~~~~~~~~vs~ip~-~hy~~~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~ 252 (664)
...|. ..+.+.++|+||++|++|| +++||||||||+||++||++||+++ + +++.+|+|+|.....
T Consensus 70 ---------~~~~~~~~~~s~~~y~Rl~l~~ll~-~~~kvlyLD~D~iv~~di~eL~~~~--l-~~~~~aav~d~~~~~- 135 (311)
T 1g9r_A 70 ---------AGFPLNIRHISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTPLWDTD--L-GDNWLGASIDLFVER- 135 (311)
T ss_dssp ---------TTSCCCCTTCCGGGGGGGGHHHHCC-SCSCEEEECSSEEECSCCHHHHTCC--C-TTCSEEEEECHHHHT-
T ss_pred ---------hcCccccccCCHHHHHHHHHHHHhh-hcCEEEEEcCCeEeccCHHHHhccC--C-CCcEEEEEeccchhh-
Confidence 01111 2233568999999999998 8999999999999999999999986 4 567788888753210
Q ss_pred ccccccCCCCCCCCCceeEEEEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEEeCCcccc
Q psy3847 253 GKLWKNHKPWPALGRGFNTGVILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYTLPCQWNV 332 (664)
Q Consensus 253 ~~~~~~~~~~p~~~~yfNSGVmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~Lp~~wN~ 332 (664)
...++...+.+....||||||||||+++||+.++.+++.++++++ .....++|||+||.+|.++ ++.||++||+
T Consensus 136 ~~~~~~~~~~~~~~~yfNsGv~linl~~~r~~~~~~~~~~~~~~~---~~~~~~~DQd~lN~~f~~~---~~~Lp~~wN~ 209 (311)
T 1g9r_A 136 QEGYKQKIGMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQY---KDVMQYQDQDILNGLFKGG---VCYANSRFNF 209 (311)
T ss_dssp STTHHHHTTCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHH---TTTCSSHHHHHHHHHHTTS---EEEECGGGSB
T ss_pred hHHHHHhcCCCCCCceEeeeeeeeeHHHHHhcchHHHHHHHHHhc---cCcCccCCcCHHHHHHcCC---EEEcChhhcc
Confidence 111123344444457999999999999999999999999888775 3557899999999999998 9999999999
Q ss_pred ccCCCCCC---------hhhh---hhhcCCcEEEEcCCCCCCCccCCCchhhHHHHHHHHh
Q psy3847 333 QLSDNTRS---------DELC---YTELTDLKIIHWNSPKKLKVKNKHMEFFRNLYLTFLE 381 (664)
Q Consensus 333 q~~~~~~~---------~~~~---~~~~~~~~IIHf~g~~KPW~~~~~~~~f~~~y~~~~~ 381 (664)
+.+..... ...+ ....++++||||+|+.|||...+ .++.+.+|+.+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~-~~~~~~~~~~~~~ 269 (311)
T 1g9r_A 210 MPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDC-TAWGAERFTELAG 269 (311)
T ss_dssp CHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSSSC-CSTTTHHHHHHHH
T ss_pred CcchhhHHhhhcccccchhhhhHHhhccCCCEEEEeCCcCCCCCCCC-CCccHHHHHHHHH
Confidence 86321100 0111 12346889999999999999875 5566666666553
No 3
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=99.92 E-value=2.3e-25 Score=237.59 Aligned_cols=141 Identities=17% Similarity=0.201 Sum_probs=104.5
Q ss_pred hhhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhccccccCCCCCCCCCceeEE
Q psy3847 193 VYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFNTG 272 (664)
Q Consensus 193 ~~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~~~~~~~~~p~~~~yfNSG 272 (664)
..+|.||+++++ + +++||||||||++|++||++||+++ .+|+++|. +|| .|||||
T Consensus 81 ~~t~~Kl~i~~l-~-~ydrvlYLDaD~lv~~di~eLf~~~-------~~aAv~d~-------------~~~---~~fNsG 135 (333)
T 1ll2_A 81 GVTLTKLHCWSL-T-QYSKCVFMDADTLVLANIDDLFERE-------ELSAAPDP-------------GWP---DCFNSG 135 (333)
T ss_dssp HHHHHHGGGGGC-T-TCSEEEEECTTEEECSCCGGGGGSC-------SSEEEECS-------------SST---TSEEEE
T ss_pred HHHHHHHHHhHh-c-CCCeEEEEeCCEEeccCHHHHhCCC-------ceeEEecC-------------CCC---cceeee
Confidence 368999999996 4 8999999999999999999999874 24556653 233 499999
Q ss_pred EEEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCC--CeEEEeCCccccccCCCCCChhhhhhhcCC
Q psy3847 273 VILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHP--YLVYTLPCQWNVQLSDNTRSDELCYTELTD 350 (664)
Q Consensus 273 VmLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p--~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~ 350 (664)
|||||++. ..+ +++.+.+++ .+.+.++|||+||.+|.+.. +++..||++||++.+........+.....+
T Consensus 136 vmlin~~~---~~~-~~l~~~~~~----~~~~~~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~~p~~~~~~~~ 207 (333)
T 1ll2_A 136 VFVYQPSV---ETY-NQLLHVASE----QGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGAN 207 (333)
T ss_dssp EEEECCCH---HHH-HHHHHHHHH----TCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHHTHHHHHHHGGG
T ss_pred EEEEeCCH---HHH-HHHHHHHHh----cCCCCCCCHHHHHHHHHhhcccCccccCCcHHhcccccchhccHHHHhhcCC
Confidence 99999873 222 344445444 24667899999999998751 334799999999974321111223334678
Q ss_pred cEEEEcCCCCCCCccC
Q psy3847 351 LKIIHWNSPKKLKVKN 366 (664)
Q Consensus 351 ~~IIHf~g~~KPW~~~ 366 (664)
++||||+|+.|||...
T Consensus 208 ~~IiHf~g~~KPW~~~ 223 (333)
T 1ll2_A 208 AKVVHFLGQTKPWNYT 223 (333)
T ss_dssp CSEEECCSSCCGGGSC
T ss_pred CEEEEECCCCCCCCCC
Confidence 9999999999999875
No 4
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=99.91 E-value=1.5e-24 Score=223.49 Aligned_cols=140 Identities=19% Similarity=0.170 Sum_probs=105.3
Q ss_pred hhhhhhcccccCccCCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhccccccCCCCCCCCCceeEEE
Q psy3847 194 YGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGKLWKNHKPWPALGRGFNTGV 273 (664)
Q Consensus 194 ~~y~RL~lp~lLp~~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~~~~~~~~~p~~~~yfNSGV 273 (664)
.+|.||.++++. +++||||||+|++|++||++||+++ .+|+++|. +|| .||||||
T Consensus 83 ~~~~kl~~~~l~--~~~~vlylD~D~~v~~~~~~Lf~~~-------~~aA~~d~-------------~~~---~~fNsGv 137 (263)
T 3u2u_A 83 VTLTKLHCWSLT--QYSKCVFMDADTLVLANIDDLFDRE-------ELSAAPDP-------------GWP---DCFNSGV 137 (263)
T ss_dssp GGGGGGGGGGCT--TCSEEEEECTTEEECSCCGGGGGSC-------SSEEEECT-------------TST---TSEEEEE
T ss_pred HHhHHHHhcccc--CcceEEEEcCCEeeccCHHHHhCCC-------cceEeccC-------------CCC---ccccCeE
Confidence 578999999987 4899999999999999999999774 24556652 233 4999999
Q ss_pred EEEechhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcC--CCeEEEeCCccccccCCCCCChhhhhhhcCCc
Q psy3847 274 ILLDLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEH--PYLVYTLPCQWNVQLSDNTRSDELCYTELTDL 351 (664)
Q Consensus 274 mLinL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~--p~~v~~Lp~~wN~q~~~~~~~~~~~~~~~~~~ 351 (664)
||||++. +..+++.+.+++. ....++|||+||.+|.+. ++.++.||++||++....+.....+....+++
T Consensus 138 ~li~p~~----~~~~~l~~~~~~~----~~~~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~~~~~~~~~~~ 209 (263)
T 3u2u_A 138 FVYQPSV----ETYNQLLHLASEQ----GSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKVFGASA 209 (263)
T ss_dssp EEECCCH----HHHHHHHHHHHHH----CCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHSSHHHHHHHGGGC
T ss_pred EEEcccH----HHHHHHHHHHHhc----CCCCcccHHHHHHHhccccccCeeEeCCcccccccchhccccHHHHhhcCCe
Confidence 9999874 3334455555542 467899999999999873 22478999999998743222212333346789
Q ss_pred EEEEcCCCCCCCccC
Q psy3847 352 KIIHWNSPKKLKVKN 366 (664)
Q Consensus 352 ~IIHf~g~~KPW~~~ 366 (664)
+||||+|+.|||...
T Consensus 210 ~IIHf~g~~KPW~~~ 224 (263)
T 3u2u_A 210 KVVHFLGRVKPWNYT 224 (263)
T ss_dssp SEEECCSSSCGGGSE
T ss_pred EEEEECCCCcCCCCC
Confidence 999999999999863
No 5
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=98.88 E-value=1.6e-09 Score=112.23 Aligned_cols=103 Identities=15% Similarity=0.110 Sum_probs=73.9
Q ss_pred cceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCC
Q psy3847 12 CEVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNK 91 (664)
Q Consensus 12 ~~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~ 91 (664)
++.++|+++..|. .......|++++...+..++++-+.+. .++. ... +
T Consensus 33 ~~~~~~~il~~~i--s~~~~~~L~~~~~~~~~~i~~~~~~~~----~~~~----~~~----------------------~ 80 (276)
T 3tzt_A 33 GRIFDVYLIHSRI--SEDKLKDLGEDLKKFSYTLYPIRATDD----LFSF----AKV----------------------T 80 (276)
T ss_dssp TCCEEEEEEESCC--CHHHHHHHHHHHHTTTCEEEEEECC----------------------------------------
T ss_pred CCceEEEEEeCCC--CHHHHHHHHHHHHHcCCEEEEEEeCHH----HHhc----Ccc----------------------c
Confidence 3578888877654 667778888888765556666665432 1221 100 0
Q ss_pred CccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhccccccccccc
Q psy3847 92 HYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVE 148 (664)
Q Consensus 92 ~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~~ 148 (664)
.+.+..+++||++|+++|++++||||||||+||++||.+||++ ++++..++|+.+
T Consensus 81 ~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~--dl~~~~~aav~d 135 (276)
T 3tzt_A 81 DRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRT--DISDYILAAASH 135 (276)
T ss_dssp ---CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTC--CCTTSSEEEEEC
T ss_pred cccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhc--CCCCCeEEEEEe
Confidence 1235789999999999999999999999999999999999998 998876666543
No 6
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=98.65 E-value=2.9e-08 Score=104.43 Aligned_cols=101 Identities=17% Similarity=0.233 Sum_probs=73.5
Q ss_pred ceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCC
Q psy3847 13 EVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKH 92 (664)
Q Consensus 13 ~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~ 92 (664)
..+++++++.+ -.......|++++......++++-+.++. ++.+.. +..
T Consensus 29 ~~~~f~il~~~--ls~~~~~~L~~~~~~~~~~i~~~~~~~~~--------~~~~~~---------------------~~~ 77 (311)
T 1g9r_A 29 TEIRFHVLDAG--ISEANRAAVAANLRGGGGNIRFIDVNPED--------FAGFPL---------------------NIR 77 (311)
T ss_dssp SCCEEEEEESS--CCHHHHHHHHHHSGGGTTTEEEEECCGGG--------GTTSCC---------------------CCT
T ss_pred CCceEEEEECC--CCHHHHHHHHHHHHHcCCEEEEEEcCHHH--------HhcCcc---------------------ccc
Confidence 46777777654 36667778888877655667776554321 222210 013
Q ss_pred ccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHHhhhcccccccccc
Q psy3847 93 YSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLV 147 (664)
Q Consensus 93 ~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~f~~~~~~~~~~~~ 147 (664)
+.+..+++||++|++|| +++||||||||+||++||.+||++ ++++..++|+.
T Consensus 78 ~~s~~~y~Rl~l~~ll~-~~~kvlyLD~D~iv~~di~eL~~~--~l~~~~~aav~ 129 (311)
T 1g9r_A 78 HISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTPLWDT--DLGDNWLGASI 129 (311)
T ss_dssp TCCGGGGGGGGHHHHCC-SCSCEEEECSSEEECSCCHHHHTC--CCTTCSEEEEE
T ss_pred cCCHHHHHHHHHHHHhh-hcCEEEEEcCCeEeccCHHHHhcc--CCCCcEEEEEe
Confidence 45678999999999998 799999999999999999999998 89876655543
No 7
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=96.71 E-value=0.00036 Score=73.88 Aligned_cols=111 Identities=17% Similarity=0.109 Sum_probs=73.1
Q ss_pred eEEEEEEEeCCCchHHHHHHHHHHHhhCCC-CeEEEEEeCchhHHHHHHHhhccCCCceeEEEEeccccc--ccccccCC
Q psy3847 14 VIQVAIVCAGYNSTRSLVTLIKSILFYRKN-PLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVV--EDVSWIPN 90 (664)
Q Consensus 14 ~ihI~~v~~g~~~~~~~~~~ikSil~~~~~-~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~--~~v~~ip~ 90 (664)
...|+++ +|.+|..++.++++||+.+++. ++++ +++++++.+..+.+-+.+ .++...+.-... ..++..+.
T Consensus 4 ~a~vt~~-~d~~Yl~~a~vl~~SL~~~~s~~~l~v-lv~~~is~~~~~~L~~~~----~~v~~v~~l~~~~~~~~~~~~~ 77 (333)
T 1ll2_A 4 QAFVTLT-TNDAYAKGALVLGSSLKQHRTSRRLAV-LTTPQVSDTMRKALEIVF----DEVITVDILDSGDSAHLTLMKR 77 (333)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHHHTTCCSEEEE-EECTTSCHHHHHHHHHHC----SEEEECCTTSTTSTTHHHHHHC
T ss_pred eEEEEEE-eCHHHHHHHHHHHHHHHHhCCCCCEEE-EEcCCCCHHHHHHHHHhC----CEEEEEeecCCcchhhcccccc
Confidence 5677764 5669999999999999998754 3555 556666655444443332 233332221110 01111111
Q ss_pred CCccchhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHH
Q psy3847 91 KHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWAL 134 (664)
Q Consensus 91 ~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~ 134 (664)
.+ ...++.||+++++ .+++||||||||+||++||.+||+.
T Consensus 78 -~~-~~~t~~Kl~i~~l--~~ydrvlYLDaD~lv~~di~eLf~~ 117 (333)
T 1ll2_A 78 -PE-LGVTLTKLHCWSL--TQYSKCVFMDADTLVLANIDDLFER 117 (333)
T ss_dssp -GG-GHHHHHHGGGGGC--TTCSEEEEECTTEEECSCCGGGGGS
T ss_pred -cc-hHHHHHHHHHhHh--cCCCeEEEEeCCEEeccCHHHHhCC
Confidence 11 2478999999996 4689999999999999999999987
No 8
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=95.55 E-value=0.0037 Score=63.88 Aligned_cols=104 Identities=18% Similarity=0.185 Sum_probs=67.4
Q ss_pred EEeCCCchHHHHHHHHHHHhhCCCCeEEE-EEeCchhHHHHHHHhhccCCCceeEEEEecccccc----cccccCCCCcc
Q psy3847 20 VCAGYNSTRSLVTLIKSILFYRKNPLHFH-LITDTVALNILQTLFSTWSVPQVEVSFYLADSVVE----DVSWIPNKHYS 94 (664)
Q Consensus 20 v~~g~~~~~~~~~~ikSil~~~~~~l~fh-ii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~----~v~~ip~~~~~ 94 (664)
++++++|..++.++++||..+++.. .++ +++++.+.+..+.+ +.. +.++. .++.... ..+.. .....
T Consensus 10 l~td~~Yl~ga~vL~~SL~~~~s~~-~lvvLvt~~vs~~~~~~L-~~~---~~~vi--~V~~l~~~~~~~~~~~-~rp~~ 81 (263)
T 3u2u_A 10 LTTNDAYAKGALVLGSSLKQHRTTR-RLVVLATPQVSDSMRKVL-ETV---FDEVI--MVDVLDSGDSAHLTLM-KRPEL 81 (263)
T ss_dssp EESSHHHHHHHHHHHHHHHHTTCCS-EEEEEECTTSCHHHHHHH-HHH---SSEEE--ECCCCCCCCHHHHHHT-TCTTG
T ss_pred EEECHHHHHHHHHHHHHHHHhCCCC-CEEEEecCCCCHHHHHHH-HHc---CCeEE--EeeecCCcchhhhhhh-cCcch
Confidence 3556799999999999999987653 333 45566665444433 332 22222 2221110 01100 01111
Q ss_pred chhhhhhhccCCcCccccCeEEEEecceeecccHHHHHHH
Q psy3847 95 GVYGLLKLTLPKVLPETLAKTIVLDTDVIFATDIAQLWAL 134 (664)
Q Consensus 95 ~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~di~eLw~~ 134 (664)
..++.||.++++.+ .+||||||+|++|.+||.+||+.
T Consensus 82 -~~~~~kl~~~~l~~--~~~vlylD~D~~v~~~~~~Lf~~ 118 (263)
T 3u2u_A 82 -GVTLTKLHCWSLTQ--YSKCVFMDADTLVLANIDDLFDR 118 (263)
T ss_dssp -GGGGGGGGGGGCTT--CSEEEEECTTEEECSCCGGGGGS
T ss_pred -hHHhHHHHhccccC--cceEEEEcCCEeeccCHHHHhCC
Confidence 46899999999875 79999999999999999999987
No 9
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=82.20 E-value=47 Score=33.90 Aligned_cols=42 Identities=12% Similarity=0.122 Sum_probs=34.2
Q ss_pred cceEEEEEEEeCCCchHHHHHHHHHHHhhC--CCCeEEEEEeCch
Q psy3847 12 CEVIQVAIVCAGYNSTRSLVTLIKSILFYR--KNPLHFHLITDTV 54 (664)
Q Consensus 12 ~~~ihI~~v~~g~~~~~~~~~~ikSil~~~--~~~l~fhii~d~~ 54 (664)
+-||=+.++|.| +|...+...++|.=.+- +..++++|++|..
T Consensus 57 n~tIGl~vfA~G-kY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~~ 100 (298)
T 3ioh_A 57 NTTIGLTVFAIK-KYVAFLKLFLETAEKHFMVGHRVHYYVFTDQP 100 (298)
T ss_dssp TCEEEEEEEECG-GGGGGHHHHHHHHHHHBSTTSEEEEEEEESCG
T ss_pred CCcEEEEEEEeC-cHHHHHHHHHHhHHHhccCCceEEEEEEeCCh
Confidence 458888898988 78888999999987663 4459999999875
No 10
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=79.86 E-value=56 Score=33.23 Aligned_cols=115 Identities=11% Similarity=0.095 Sum_probs=67.5
Q ss_pred CCCeEEEEecceeeccChHHHHHHhhhcCCCcEEEEeeccchhhhcc---ccccCC-----CCCC-CC-CceeEEEEEEe
Q psy3847 208 TLAKTIVLDTDVIFATDIAQLWALFSRLRQRQTIGLVENQSDWYLGK---LWKNHK-----PWPA-LG-RGFNTGVILLD 277 (664)
Q Consensus 208 ~~dkvLYLD~D~iv~~DI~eLw~~~~~~~~~~~~a~v~d~~~~y~~~---~~~~~~-----~~p~-~~-~yfNSGVmLin 277 (664)
++|-+..+|+|++|.+++.. + .. +.++|+.. ..||... ....+. -+|. .| -|+-+|+.==-
T Consensus 138 evDYLf~~dvd~~F~~~vG~-----E-~L-g~lv~~lH--p~~y~~~~~~fpYERrp~S~AyIp~~eGdfYY~Ga~fGGt 208 (289)
T 1o7q_A 138 EVDFLFCMDVDQVFQDKFGV-----E-TL-GESVAQLQ--AWWYKADPNDFTYERRKESAAYIPFGEGDFYYHAAIFGGT 208 (289)
T ss_dssp HCSEEEEECSSEEECSCBCG-----G-GC-SSEEEEEC--TTTTTSCGGGSCCCCCTTSTTCCCTTCCSCCEEEEEEEEC
T ss_pred cCCEEEEeeCCcEeeccCCH-----H-HH-HHHHHccC--HHHhCCCCCCCCCCCCcCceeeecCCCCCEEEEceeeCCc
Confidence 78999999999999998753 1 12 23666542 2234321 111111 1221 23 47777776555
Q ss_pred chhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHh-cCCCeEEEeCCccccccC
Q psy3847 278 LTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIIS-EHPYLVYTLPCQWNVQLS 335 (664)
Q Consensus 278 L~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~-~~p~~v~~Lp~~wN~q~~ 335 (664)
.+..-+ +.+.+...+..-.++.-.-.++|..-||..|- .+|. +.|+++|++...
T Consensus 209 ~~~vl~--l~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~KPt--KvLSPEY~wd~~ 263 (289)
T 1o7q_A 209 PTQVLN--ITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNKPT--KILSPEYCWDYH 263 (289)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCS--EEECGGGSBCGG
T ss_pred HHHHHH--HHHHHHHHHHHHHhCCeEEEecchhhhhHHHhhcCCC--EEECHHHCCCcc
Confidence 554433 34444444443333344457999999999954 5664 569999998753
No 11
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=77.58 E-value=58 Score=32.38 Aligned_cols=119 Identities=10% Similarity=0.083 Sum_probs=60.4
Q ss_pred CCCeEEEEecceeeccChHH-HHHHhhhcCCCcEEEEeeccchhhhccc---cccCC-----CCCC-CC-CceeEEEEEE
Q psy3847 208 TLAKTIVLDTDVIFATDIAQ-LWALFSRLRQRQTIGLVENQSDWYLGKL---WKNHK-----PWPA-LG-RGFNTGVILL 276 (664)
Q Consensus 208 ~~dkvLYLD~D~iv~~DI~e-Lw~~~~~~~~~~~~a~v~d~~~~y~~~~---~~~~~-----~~p~-~~-~yfNSGVmLi 276 (664)
++|-+..+|+|++|.+++.. .. +. -.++.++|... ..||.... ...+. -+|. .| -|+-+|+.==
T Consensus 87 evDyLf~~dvd~~F~~~vG~E~L-~p--~~~~~lva~lH--p~~y~~~~~~fpYERrp~S~AyIp~~eGdfYY~ga~fGG 161 (246)
T 4ayl_A 87 ETDYLFFFNANLLFTSPIGKEIL-PP--SDSNGLLGTMH--PGFYNKPNSEFTYERRDASTAYIPEGEGRYYYAGGLSGG 161 (246)
T ss_dssp HCSEEEEECTTEEECSCBCGGGS-CC--TTSCCEEEEBC--GGGC------------------------CCCBCSSEEEE
T ss_pred hCCEEEEEeCCceeeccCCHHHc-cc--CCCCCEEEEec--hhhhCCCcccCcccCCccccccccCCCCCeEEeeeecCC
Confidence 68999999999999998752 10 01 01234555432 22333211 11111 1111 12 2333333322
Q ss_pred echhHHhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeEEEeCCcccccc
Q psy3847 277 DLTKLRDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLVYTLPCQWNVQL 334 (664)
Q Consensus 277 nL~~~R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v~~Lp~~wN~q~ 334 (664)
-..... ++++.+...+..-.++.-.-.++|..-||..|-.|+- -..|+++|++..
T Consensus 162 ~~~~vl--~Lt~~c~~~i~~D~~n~I~A~whDESHLNKYfl~~KP-~~vLSPEY~wd~ 216 (246)
T 4ayl_A 162 CTKAYL--KLCTTICSWVDRDATNHIIPIWHDESLINKYFLDNPP-AITLSPAYLYPE 216 (246)
T ss_dssp EHHHHH--HHHHHHHHHHHHHHTTCSSCSCCHHHHHHHHHHHSCC-SEEECGGGGEET
T ss_pred cHHHHH--HHHHHHHHHHHHHHhCCceEeccchhHhHHHHHhCCC-CeeeCHHHcCCc
Confidence 233322 2344444444333333445679999999999885543 337999999865
No 12
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=72.08 E-value=28 Score=33.39 Aligned_cols=42 Identities=14% Similarity=0.071 Sum_probs=36.7
Q ss_pred CchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHh
Q psy3847 546 YPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRS 587 (664)
Q Consensus 546 yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~ 587 (664)
--....||.|+..|+++|++++|.|-++.++.-+.+.+.+.+
T Consensus 74 ~G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~ 115 (255)
T 1qg8_A 74 TRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDT 115 (255)
T ss_dssp CHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHh
Confidence 456788999999999999999999999999988888777654
No 13
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=71.74 E-value=3.1 Score=39.96 Aligned_cols=42 Identities=17% Similarity=0.130 Sum_probs=37.3
Q ss_pred CchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHh
Q psy3847 546 YPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRS 587 (664)
Q Consensus 546 yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~ 587 (664)
.-....||.|+..|+.+||+++|.|-++.++..+.+.+.+..
T Consensus 70 ~G~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 70 AGLGMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQK 111 (240)
T ss_dssp CCHHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHh
Confidence 447789999999999999999999999999988888877754
No 14
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=71.71 E-value=5.3 Score=40.72 Aligned_cols=101 Identities=17% Similarity=0.238 Sum_probs=49.0
Q ss_pred cCCCCcEEEEEeeChhhHHHHHHHh---hccC-----CcEEEEEEeCch----hHHHHHHHHhccccccccccEEEEEEe
Q psy3847 473 SSDGNDVTLVAQLSMDRLQMVEMLF---KHWE-----GPISLTLYMSDA----EAQQFLSYAGNSEALRSRRNIGYHVVY 540 (664)
Q Consensus 473 ~~~~~dVTLvTq~s~drL~~l~~l~---~~W~-----GPiS~av~~~~~----e~~~~~~~~~~~~~~~~r~~v~~h~v~ 540 (664)
+.++-.|++-...|++.+..-...+ -+|. .+-.+||-+|=. ++..++.++.. . ..|+.+.+++..
T Consensus 12 ~~gp~~~~~~~~~~l~~v~~~~~~v~~gG~~~P~~c~~~~kvAIIIPyRdR~~hL~~fl~~lhp--~-L~rQ~l~y~I~V 88 (287)
T 3lw6_A 12 GSGPMLIEFNIPVDLKLVEQQNPKVKLGGRYTPMDGASVHKMALLVPFRDRFEELLQFVPHMTA--F-LKRQGVAHHIFV 88 (287)
T ss_dssp -----------------------------------CCCCCEEEEEEEESSCHHHHHHHHHHHHH--H-HHHTTCEEEEEE
T ss_pred CCCCeEEEcCCCCCHHHHHHhCCCcccCCEECCCccCCcceEEEEEEeCCHHHHHHHHHHHHHH--H-HHHcCCceEEEE
Confidence 3344455555555555554332222 2554 456899999853 33444544432 2 246678777664
Q ss_pred ec-CCCCchh--hHHHHHhhcCC--CCeEEEeecCcccCCC
Q psy3847 541 KE-GNFYPIN--TLRNVALNQVS--TPYVFLLDIDFLPMFG 576 (664)
Q Consensus 541 ~~-~~~yPiN--~LRNvA~~~a~--T~~v~~~DiD~~Ps~~ 576 (664)
-+ ..-.|.| .|-||+-..|. .+++++-|||++|..+
T Consensus 89 ieQ~~~~~FNRa~LlNvGf~ea~~~~d~~ifHDVDLlP~dd 129 (287)
T 3lw6_A 89 LNQVDRFRFNRASLINVGFQFASDVYDYIAMHDVDLLPLND 129 (287)
T ss_dssp EEECSSSCCCHHHHHHHHHHHSCTTCCEEEEECTTEEECCT
T ss_pred EecCCCCccchhheecccHHHHhccCCEEEEecccccccCC
Confidence 32 2335666 78999998875 6999999999999864
No 15
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=70.25 E-value=15 Score=41.23 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=63.2
Q ss_pred cEEEEEeeChhhHHH-HHHHhhccC-CcEEEEEEeCc--hhHHHHHHHHhccccccccccEEEEEEeecCCCCchhhHHH
Q psy3847 478 DVTLVAQLSMDRLQM-VEMLFKHWE-GPISLTLYMSD--AEAQQFLSYAGNSEALRSRRNIGYHVVYKEGNFYPINTLRN 553 (664)
Q Consensus 478 dVTLvTq~s~drL~~-l~~l~~~W~-GPiS~av~~~~--~e~~~~~~~~~~~~~~~~r~~v~~h~v~~~~~~yPiN~LRN 553 (664)
.|.+.|.-..+.|.. |..+.+... .+.-+-|.-.+ .+... .+++.. ....++++...+.-.-.-..||
T Consensus 96 sviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~---~~~~~~-----~~~~i~~i~~~~~~~g~~~a~N 167 (625)
T 2z86_A 96 SIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEE---IVREFE-----SLLNIKYVRQKDYGYQLCAVRN 167 (625)
T ss_dssp EEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHH---HHHTTT-----TTSCEEEEEECCCSCCHHHHHH
T ss_pred EEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHH---HHHHhh-----hcCCeEEEEeCCCCcchhHHHH
Confidence 455556656666664 555655533 35555444322 22222 333211 1112444545444445678899
Q ss_pred HHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHh
Q psy3847 554 VALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRS 587 (664)
Q Consensus 554 vA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~ 587 (664)
.|+..|+++||+++|.|..+.++.-+.+...+..
T Consensus 168 ~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~ 201 (625)
T 2z86_A 168 LGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAV 201 (625)
T ss_dssp HHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHH
T ss_pred HHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999988888776653
No 16
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=67.63 E-value=33 Score=33.52 Aligned_cols=41 Identities=17% Similarity=0.084 Sum_probs=36.5
Q ss_pred chhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHh
Q psy3847 547 PINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRS 587 (664)
Q Consensus 547 PiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~ 587 (664)
-+-..||.|++.|+.+|++++|.|.++.++.-+.+.+.+.+
T Consensus 61 g~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 61 HGFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CTTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 45689999999999999999999999999998888887664
No 17
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=60.82 E-value=9 Score=41.37 Aligned_cols=54 Identities=15% Similarity=0.127 Sum_probs=43.8
Q ss_pred CchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEcceee
Q psy3847 546 YPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFET 606 (664)
Q Consensus 546 yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE~ 606 (664)
.-.-..||.|+..|+.+||+++|.|..+.++.-+.+.+.+.+. ..+.|+|....
T Consensus 100 ~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~-------~~~~v~~~~~~ 153 (472)
T 1xhb_A 100 SGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHD-------RRTVVCPIIDV 153 (472)
T ss_dssp CCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHC-------TTEEEEEEEEE
T ss_pred CChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhC-------CCEEEEeeeee
Confidence 3477899999999999999999999999999999888877642 23457776654
No 18
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=58.48 E-value=25 Score=33.79 Aligned_cols=109 Identities=16% Similarity=0.185 Sum_probs=57.9
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCcc
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHYS 94 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~~ 94 (664)
|-|++.+ .|....+..+|.|++.....++.+.|+.|.. .+...++++.+.. ..++.++..+... . .....-.
T Consensus 3 vSViIp~--yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S-~d~t~~~~~~~~~-~~~i~~i~~~~~~--~--~~~~~n~ 74 (255)
T 1qg8_A 3 VSVIMTS--YNKSDYVAKSISSILSQTFSDFELFIMDDNS-NEETLNVIRPFLN-DNRVRFYQSDISG--V--KERTEKT 74 (255)
T ss_dssp EEEEEEE--SSCTTTHHHHHHHHHTCSCCCEEEEEEECSC-CHHHHHHHGGGGG-STTEEEEECCCCS--H--HHHHSSC
T ss_pred EEEEEEc--CCCHHHHHHHHHHHHhccCCceEEEEEECCC-CchHHHHHHHHhh-cCCEEEEeccccc--c--ccccccc
Confidence 4555555 3557889999999998776678887776554 3334455555522 2234444433000 0 0000011
Q ss_pred chhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 95 GVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 95 ~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
|.+.-.-..+... .-+-|++||+|.++..| +..+.+.
T Consensus 75 G~~~a~N~gi~~a---~g~~i~~lD~Dd~~~~~~l~~~~~~ 112 (255)
T 1qg8_A 75 RYAALINQAIEMA---EGEYITYATDDNIYMPDRLLKMVRE 112 (255)
T ss_dssp HHHHHHHHHHHHC---CCSEEEEEETTEEECTTHHHHHHHH
T ss_pred CHHHHHHHHHHHc---CCCEEEEeCCCCccChHHHHHHHHH
Confidence 2222222222211 33679999999999766 4444444
No 19
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=57.92 E-value=14 Score=37.68 Aligned_cols=34 Identities=21% Similarity=0.372 Sum_probs=29.2
Q ss_pred CCCchhhHHHHHh----hcCCCCeEEEeecCcccCCCc
Q psy3847 544 NFYPINTLRNVAL----NQVSTPYVFLLDIDFLPMFGL 577 (664)
Q Consensus 544 ~~yPiN~LRNvA~----~~a~T~~v~~~DiD~~Ps~~l 577 (664)
..+..-.+||+|. ..|+.+|++++|+|.+|.++.
T Consensus 109 ~~f~~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 109 TIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp SCCCHHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTT
T ss_pred CccchhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCc
Confidence 3455667899999 899999999999999999883
No 20
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=57.15 E-value=9.9 Score=41.50 Aligned_cols=54 Identities=11% Similarity=0.018 Sum_probs=44.1
Q ss_pred CchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEcceee
Q psy3847 546 YPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFET 606 (664)
Q Consensus 546 yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE~ 606 (664)
.-.-..||.|+..|+.+||+++|.|..+.++.-+.+.+.+.+. ..++|.|....
T Consensus 132 ~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~-------~~~vv~~~~~~ 185 (501)
T 2ffu_A 132 EGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAED-------RTRVVSPIIDV 185 (501)
T ss_dssp CHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHC-------TTEEEEEEEEE
T ss_pred cCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhC-------CCeEEEeeecc
Confidence 3467899999999999999999999999999999888877642 22467787654
No 21
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=49.09 E-value=12 Score=41.90 Aligned_cols=54 Identities=17% Similarity=0.192 Sum_probs=43.3
Q ss_pred CchhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHHhcccCCCCCcEEEEEcceee
Q psy3847 546 YPINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFET 606 (664)
Q Consensus 546 yPiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE~ 606 (664)
.-.-..||.|+..|+.+||+++|.|..+.++.-+.+.+.+... ..+.|.|....
T Consensus 182 ~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~-------~~~vv~~~i~~ 235 (570)
T 2d7i_A 182 EGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARN-------RKTIVCPMIDV 235 (570)
T ss_dssp CCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHC-------TTEEEEEEEEE
T ss_pred CCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhC-------CCEEEeeeeec
Confidence 4467889999999999999999999999999999888877641 23456676543
No 22
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=45.78 E-value=13 Score=35.64 Aligned_cols=80 Identities=15% Similarity=0.188 Sum_probs=43.9
Q ss_pred CceeEEEEEEechhH--HhhchhHHHHHHHHHHhhhcCCCCCCChHHHHHHHhcCCCeE-EEeCCccccccCCCCCChhh
Q psy3847 267 RGFNTGVILLDLTKL--RDISWAGFWRIIAEKFLLTRLWTSLADQDIFNAIISEHPYLV-YTLPCQWNVQLSDNTRSDEL 343 (664)
Q Consensus 267 ~yfNSGVmLinL~~~--R~~~~~~~~~~~~~~~l~~~~~~~~~DQDiLN~v~~~~p~~v-~~Lp~~wN~q~~~~~~~~~~ 343 (664)
.+.||||.|+.-+.+ |+-.|. .+.+..-..+.+....+...+|-.-|... ..=|..-|+.. +.
T Consensus 118 ~~lNtGvfL~~~~~~~irncqWS-------ld~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 183 (213)
T 2p6w_A 118 YPINTGVKFVHKDALEIEKIVWS-------LRNEAPWNTFPYEQKTVYEYVFPRIPGRYIVHDPYTLNCIV-------KA 183 (213)
T ss_dssp SSCCTTEEEEEGGGHHHHHHHHH-------TTTSTTTTSTTTHHHHHHHTHHHHSTTSEEEECCTTTSEET-------TT
T ss_pred ccccceeeeecccchhhhhceee-------hhhhhcccCCCcccceeeeeeccCCCcceEecCcceeeeeh-------hh
Confidence 489999999876654 332232 12222223455655567777776544322 22233333332 22
Q ss_pred hhhhcCCcEEEEcCCCC
Q psy3847 344 CYTELTDLKIIHWNSPK 360 (664)
Q Consensus 344 ~~~~~~~~~IIHf~g~~ 360 (664)
+.+..+++..+|..|..
T Consensus 184 ~~~~~~~~~~~~~~~~~ 200 (213)
T 2p6w_A 184 YPEHVKDALFVHMCGTS 200 (213)
T ss_dssp CTTTGGGCSEEECTTCC
T ss_pred chhhhhhhhhhhhccCc
Confidence 33446788899999864
No 23
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=43.19 E-value=22 Score=36.40 Aligned_cols=52 Identities=19% Similarity=0.244 Sum_probs=39.4
Q ss_pred hhhHHHHHhhcCCCCeEEEeecCcc-cCCCcHHHHHHHHHhcccCCCCCcEEEEEccee
Q psy3847 548 INTLRNVALNQVSTPYVFLLDIDFL-PMFGLYPYLKSSIRSMDMHGHGGKKVLVVPAFE 605 (664)
Q Consensus 548 iN~LRNvA~~~a~T~~v~~~DiD~~-Ps~~l~~~l~~~~~~~~~~~~~~~~a~VvPaFE 605 (664)
.-.-||.|+..|+.+||+++|.|.. +.++.-+.+.+.+.. .++..+|.+.+.
T Consensus 119 ~~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~------~~~~~~v~g~~~ 171 (329)
T 3ckj_A 119 KGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLT------GDGVHLVKSFYR 171 (329)
T ss_dssp HHHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHS------CSSCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHh------CCCccEEEEEec
Confidence 5577999999999999999999999 788877777665432 234456666554
No 24
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=43.05 E-value=41 Score=36.46 Aligned_cols=101 Identities=16% Similarity=0.099 Sum_probs=56.8
Q ss_pred ceEEEEEEEeCCCchH-HHHHHHHHHHhhCCCCe--EEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccC
Q psy3847 13 EVIQVAIVCAGYNSTR-SLVTLIKSILFYRKNPL--HFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIP 89 (664)
Q Consensus 13 ~~ihI~~v~~g~~~~~-~~~~~ikSil~~~~~~l--~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip 89 (664)
..+-|++.+-+ -.. .+..+|.||+......+ .+.|+.|....+.+..++... +++ .++..+..
T Consensus 66 p~vSVIIp~yN--~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~--~~v--~vi~~~~n-------- 131 (501)
T 2ffu_A 66 PATSVVITFHN--EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKI--EKV--RVLRNDRR-------- 131 (501)
T ss_dssp CCEEEEEEESS--CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGB--TTE--EEEECSSC--------
T ss_pred CCEEEEEEeCc--CcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcC--CCE--EEEECCCC--------
Confidence 35777776654 355 88999999999876554 676676654444444555443 233 33333221
Q ss_pred CCCccchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 90 NKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 90 ~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
.|.+.-.-..+... .=+=|++||+|.++..+ |.+|...
T Consensus 132 ----~G~~~A~N~G~~~A---~gd~i~flD~D~~~~p~~L~~ll~~ 170 (501)
T 2ffu_A 132 ----EGLMRSRVRGADAA---QAKVLTFLDSHCECNEHWLEPLLER 170 (501)
T ss_dssp ----CHHHHHHHHHHHHC---CSSEEEECCSSEEECTTCHHHHHHH
T ss_pred ----cCHHHHHHHHHHhc---CCCEEEEECCCcccCccHHHHHHHH
Confidence 12222111111111 23669999999999655 5555554
No 25
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=39.56 E-value=70 Score=30.10 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=57.4
Q ss_pred eEEEEEEEeCCCchHHHHHHHHHHHhhCCCCeEEEEEeCch---hHHHHHHHhhccCCCceeEEEEecccccccccccCC
Q psy3847 14 VIQVAIVCAGYNSTRSLVTLIKSILFYRKNPLHFHLITDTV---ALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPN 90 (664)
Q Consensus 14 ~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l~fhii~d~~---s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~ 90 (664)
.+-|++.+- |....+..+|+|++.....++.+.++.|.. +.+.++++.... +++ .+++-+.
T Consensus 6 ~vsViIp~y--n~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~--~~i--~~i~~~n---------- 69 (240)
T 3bcv_A 6 KVSVIVPIY--NVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQY--PNI--KVIHKKN---------- 69 (240)
T ss_dssp SEEEEEEES--SCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHC--SSE--EEEECCC----------
T ss_pred cEEEEEecC--CCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhC--CCE--EEEECCC----------
Confidence 466777664 457888999999998776678888887643 344555554433 233 3333211
Q ss_pred CCccchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 91 KHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 91 ~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
.|.++-.-..+... .=+-|++||+|.++..+ +.+|.+.
T Consensus 70 ---~G~~~a~N~g~~~a---~g~~i~~lD~Dd~~~~~~l~~l~~~ 108 (240)
T 3bcv_A 70 ---AGLGMACNSGLDVA---TGEYVAFCDSDDYVDSDMYMTMYNV 108 (240)
T ss_dssp ---CCHHHHHHHHHHHC---CSSEEEECCTTCCCCTTHHHHHHHH
T ss_pred ---CChHHHHHHHHHHc---CCCEEEEECCCCcCCHHHHHHHHHH
Confidence 11222211222111 22679999999999766 4455544
No 26
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=39.06 E-value=57 Score=36.19 Aligned_cols=102 Identities=17% Similarity=0.140 Sum_probs=58.0
Q ss_pred ceEEEEEEEeCCCchHHHHHHHHHHHhhCCCCe--EEEEEeCch---h-HHHHHHHhhccCCCceeEEEEeccccccccc
Q psy3847 13 EVIQVAIVCAGYNSTRSLVTLIKSILFYRKNPL--HFHLITDTV---A-LNILQTLFSTWSVPQVEVSFYLADSVVEDVS 86 (664)
Q Consensus 13 ~~ihI~~v~~g~~~~~~~~~~ikSil~~~~~~l--~fhii~d~~---s-~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~ 86 (664)
..+-|++.+-+. ....+..+|.||+..+...+ .+.|+.|.. + .+.++++.... +++ .++..+..
T Consensus 112 P~vSVIIp~yNe-~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~--~~v--~vi~~~~n----- 181 (570)
T 2d7i_A 112 PNTSIIIPFHNE-GWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALF--PSV--RILRTKKR----- 181 (570)
T ss_dssp CCEEEEEEESSC-CHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS--TTE--EEEECSSC-----
T ss_pred CCeEEEEEECCC-CHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhC--CeE--EEEECCCC-----
Confidence 457777766543 23888999999999886654 666665543 3 45566655544 233 33333221
Q ss_pred ccCCCCccchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 87 WIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 87 ~ip~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
.|.+.-.-..+-.. .=+-|++||+|+++..+ |..|...
T Consensus 182 -------~G~~~A~N~G~~~A---~gd~i~fLD~D~~~~p~~L~~ll~~ 220 (570)
T 2d7i_A 182 -------EGLIRTRMLGASVA---TGDVITFLDSHCEANVNWLPPLLDR 220 (570)
T ss_dssp -------CCHHHHHHHHHHHC---CSSEEEECCSSEEECTTCSHHHHHH
T ss_pred -------CCHHHHHHHHHHhc---CCCEEEEEcCCccccccHHHHHHHH
Confidence 12221111111111 23679999999999654 5555554
No 27
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=35.01 E-value=1.1e+02 Score=32.64 Aligned_cols=102 Identities=16% Similarity=0.117 Sum_probs=57.0
Q ss_pred ceEEEEEEEeCCCch-HHHHHHHHHHHhhCCCC--eEEEEEeCch----hHHHHHHHhhccCCCceeEEEEecccccccc
Q psy3847 13 EVIQVAIVCAGYNST-RSLVTLIKSILFYRKNP--LHFHLITDTV----ALNILQTLFSTWSVPQVEVSFYLADSVVEDV 85 (664)
Q Consensus 13 ~~ihI~~v~~g~~~~-~~~~~~ikSil~~~~~~--l~fhii~d~~----s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v 85 (664)
..+-|++.+-+ -. ..+..+|.||+...... ..+.|+.|.. +.+.++++.+.. + .++.++..+..
T Consensus 29 p~vSVIIp~yN--~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~--~-~~v~vi~~~~n---- 99 (472)
T 1xhb_A 29 PTTSVVIVFHN--EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKL--K-VPVHVIRMEQR---- 99 (472)
T ss_dssp CCEEEEEEESS--CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSS--S-SCEEEEECSSC----
T ss_pred CCeEEEEEeCC--CCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHC--C-CcEEEEECCCC----
Confidence 35777776654 46 88899999999977655 4666665432 344566655543 1 13444443321
Q ss_pred cccCCCCccchhhhhhhccCCcCccccCeEEEEecceeeccc-HHHHHHH
Q psy3847 86 SWIPNKHYSGVYGLLKLTLPKVLPETLAKTIVLDTDVIFATD-IAQLWAL 134 (664)
Q Consensus 86 ~~ip~~~~~~~~~~~rL~lp~iLP~~v~kvIyLD~Dilv~~d-i~eLw~~ 134 (664)
.|.+.-.-..+... .=+=|++||+|.++..+ |.+|...
T Consensus 100 --------~G~~~a~N~g~~~A---~gd~i~flD~D~~~~p~~L~~ll~~ 138 (472)
T 1xhb_A 100 --------SGLIRARLKGAAVS---RGQVITFLDAHCECTAGWLEPLLAR 138 (472)
T ss_dssp --------CCHHHHHHHHHHHC---CSSEEEEEESSEEECTTCHHHHHHH
T ss_pred --------CChHHHHHHHHHhc---cCCeEEEECCCeEeCccHHHHHHHH
Confidence 11111111111111 23569999999999655 5555554
No 28
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=24.85 E-value=47 Score=34.68 Aligned_cols=118 Identities=9% Similarity=0.188 Sum_probs=0.0
Q ss_pred EEEEEEEeCCCchHHHHHHHHHHHhhC-CCCeEEEEEeCchhHHHHHHHhhccCCCceeEEEEecccccccccccCCCCc
Q psy3847 15 IQVAIVCAGYNSTRSLVTLIKSILFYR-KNPLHFHLITDTVALNILQTLFSTWSVPQVEVSFYLADSVVEDVSWIPNKHY 93 (664)
Q Consensus 15 ihI~~v~~g~~~~~~~~~~ikSil~~~-~~~l~fhii~d~~s~~~l~~l~~~~~~~~~~~~fy~~~~~~~~v~~ip~~~~ 93 (664)
+.+.+++...|... +..+|.||+... ...-...+|+|+-+.+...++++.+...-..+.+-++......-.-.....|
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~g~~~y 80 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQGY 80 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGHHH
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhcCcccc
Q ss_pred cchhhhhhhccCCcCc--cccCeEEEEecceeecccHHHHHHH
Q psy3847 94 SGVYGLLKLTLPKVLP--ETLAKTIVLDTDVIFATDIAQLWAL 134 (664)
Q Consensus 94 ~~~~~~~rL~lp~iLP--~~v~kvIyLD~Dilv~~di~eLw~~ 134 (664)
..++.-++-.+..++- . .++||+||-|+++..|.-+-...
T Consensus 81 ~~ia~h~~~al~~vf~~~~-~~~vIiLEDDl~~spdF~~y~~~ 122 (343)
T 1fo8_A 81 YKIARHYRWALGQIFHNFN-YPAAVVVEDDLEVAPDFFEYFQA 122 (343)
T ss_dssp HHHHHHHHHHHHHHHTTSC-CSEEEEEETTEEECTTHHHHHHH
T ss_pred hhHhHHHHHHHHHHHHhcc-CCEEEEEcCCCeECHHHHHHHHH
No 29
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=22.24 E-value=56 Score=36.34 Aligned_cols=40 Identities=20% Similarity=0.083 Sum_probs=35.1
Q ss_pred chhhHHHHHhhcCCCCeEEEeecCcccCCCcHHHHHHHHH
Q psy3847 547 PINTLRNVALNQVSTPYVFLLDIDFLPMFGLYPYLKSSIR 586 (664)
Q Consensus 547 PiN~LRNvA~~~a~T~~v~~~DiD~~Ps~~l~~~l~~~~~ 586 (664)
-.-..||.|+..|+.+||+++|.|-++.++.-+.+.+...
T Consensus 441 G~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~ 480 (625)
T 2z86_A 441 GIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFR 480 (625)
T ss_dssp CHHHHHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHH
Confidence 4778899999999999999999999999998887776654
Done!