Query psy3848
Match_columns 552
No_of_seqs 186 out of 2269
Neff 6.0
Searched_HMMs 46136
Date Fri Aug 16 18:57:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3848.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3848hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2624|consensus 100.0 3.3E-56 7.2E-61 472.2 27.6 359 2-451 39-399 (403)
2 PLN02872 triacylglycerol lipas 100.0 1.5E-52 3.2E-57 446.9 28.5 355 1-452 34-391 (395)
3 PHA02857 monoglyceride lipase; 99.9 2.9E-25 6.3E-30 222.7 26.6 129 16-194 5-133 (276)
4 PLN02385 hydrolase; alpha/beta 99.9 2.3E-25 4.9E-30 233.1 25.2 141 6-195 56-199 (349)
5 PRK00870 haloalkane dehalogena 99.9 1.2E-24 2.7E-29 222.1 25.9 132 8-192 16-149 (302)
6 PLN02824 hydrolase, alpha/beta 99.9 6.6E-25 1.4E-29 222.7 23.7 121 20-193 16-137 (294)
7 PRK10749 lysophospholipase L2; 99.9 2E-24 4.4E-29 224.6 26.2 137 12-194 31-167 (330)
8 TIGR02240 PHA_depoly_arom poly 99.9 1.4E-24 3.1E-29 218.6 23.7 119 19-194 9-127 (276)
9 PRK03592 haloalkane dehalogena 99.9 1.1E-24 2.4E-29 221.2 22.9 122 11-193 7-128 (295)
10 KOG1455|consensus 99.9 9.4E-25 2E-29 221.1 21.0 284 10-450 26-312 (313)
11 PLN02298 hydrolase, alpha/beta 99.9 5.3E-24 1.1E-28 220.3 26.9 144 5-195 26-171 (330)
12 TIGR03343 biphenyl_bphD 2-hydr 99.9 4.2E-23 9.1E-28 206.5 24.0 64 379-448 218-281 (282)
13 KOG4178|consensus 99.9 8.9E-24 1.9E-28 216.6 19.2 123 12-186 22-144 (322)
14 TIGR03056 bchO_mg_che_rel puta 99.9 1.1E-22 2.5E-27 201.3 23.2 118 18-192 12-129 (278)
15 PLN02679 hydrolase, alpha/beta 99.9 1.1E-22 2.5E-27 214.3 24.6 104 40-193 87-191 (360)
16 TIGR01250 pro_imino_pep_2 prol 99.9 2.2E-22 4.8E-27 197.5 24.7 124 18-193 8-131 (288)
17 TIGR01836 PHA_synth_III_C poly 99.9 1.4E-22 3E-27 212.5 24.1 115 40-197 61-175 (350)
18 PRK03204 haloalkane dehalogena 99.9 1.7E-22 3.7E-27 206.0 23.6 128 6-193 9-136 (286)
19 PLN02965 Probable pheophorbida 99.9 1E-22 2.2E-27 203.0 21.2 101 43-192 5-106 (255)
20 COG2267 PldB Lysophospholipase 99.9 6.9E-23 1.5E-27 211.6 20.0 137 11-197 9-146 (298)
21 PRK10673 acyl-CoA esterase; Pr 99.9 2.6E-22 5.7E-27 197.6 22.7 100 39-190 14-113 (255)
22 PLN02652 hydrolase; alpha/beta 99.9 2.8E-22 6.1E-27 214.6 24.6 138 11-195 110-247 (395)
23 TIGR03611 RutD pyrimidine util 99.9 2.5E-22 5.5E-27 194.7 21.6 105 39-193 11-115 (257)
24 PLN02578 hydrolase 99.9 4.2E-22 9E-27 209.3 24.5 105 39-194 84-188 (354)
25 PRK10349 carboxylesterase BioH 99.9 3.2E-22 6.8E-27 198.6 22.0 64 379-448 191-254 (256)
26 PLN03087 BODYGUARD 1 domain co 99.9 8.7E-22 1.9E-26 215.0 26.3 129 15-195 179-311 (481)
27 PRK06489 hypothetical protein; 99.9 1.2E-21 2.6E-26 206.2 25.6 67 379-452 287-359 (360)
28 TIGR02427 protocat_pcaD 3-oxoa 99.9 3.7E-22 8.1E-27 191.2 18.9 103 40-193 12-114 (251)
29 TIGR01738 bioH putative pimelo 99.9 5.9E-22 1.3E-26 189.5 19.8 63 379-447 183-245 (245)
30 PLN02511 hydrolase 99.9 5.1E-22 1.1E-26 211.9 20.4 141 9-193 69-210 (388)
31 PRK10985 putative hydrolase; P 99.9 2.3E-21 5.1E-26 201.3 23.5 142 9-195 29-170 (324)
32 PF12697 Abhydrolase_6: Alpha/ 99.9 1.3E-21 2.9E-26 183.8 18.2 103 44-195 1-103 (228)
33 KOG1454|consensus 99.9 2.1E-21 4.6E-26 202.9 20.5 143 12-199 26-172 (326)
34 PRK07581 hypothetical protein; 99.9 3.2E-21 6.8E-26 200.5 21.7 67 379-451 270-337 (339)
35 TIGR01607 PST-A Plasmodium sub 99.9 6.2E-21 1.3E-25 199.4 23.1 160 16-195 2-187 (332)
36 PLN03084 alpha/beta hydrolase 99.9 2.3E-20 5E-25 199.1 26.9 132 9-194 102-233 (383)
37 COG1647 Esterase/lipase [Gener 99.9 3.4E-21 7.3E-26 187.6 18.4 229 40-448 14-242 (243)
38 KOG4409|consensus 99.9 4.9E-21 1.1E-25 197.4 19.6 145 2-198 56-200 (365)
39 PRK11126 2-succinyl-6-hydroxy- 99.9 1.2E-20 2.6E-25 184.6 21.5 100 41-192 2-101 (242)
40 PLN02894 hydrolase, alpha/beta 99.9 7.3E-20 1.6E-24 196.3 28.5 111 39-195 103-213 (402)
41 TIGR03695 menH_SHCHC 2-succiny 99.9 1.1E-20 2.3E-25 180.2 19.7 105 41-193 1-105 (251)
42 PRK13604 luxD acyl transferase 99.9 5.9E-20 1.3E-24 189.5 22.5 135 10-195 8-143 (307)
43 PRK07868 acyl-CoA synthetase; 99.9 1E-19 2.2E-24 215.1 26.8 85 379-465 292-376 (994)
44 TIGR01838 PHA_synth_I poly(R)- 99.8 1.7E-19 3.7E-24 199.0 25.9 116 39-197 186-306 (532)
45 PRK08775 homoserine O-acetyltr 99.8 8.4E-20 1.8E-24 190.8 22.1 67 379-451 272-340 (343)
46 TIGR01392 homoserO_Ac_trn homo 99.8 4.4E-20 9.5E-25 193.5 19.0 67 379-448 283-351 (351)
47 PRK00175 metX homoserine O-ace 99.8 3.1E-20 6.7E-25 197.3 17.7 71 379-452 304-376 (379)
48 TIGR01249 pro_imino_pep_1 prol 99.8 2.1E-19 4.6E-24 184.6 23.2 127 11-193 4-130 (306)
49 PRK14875 acetoin dehydrogenase 99.8 1.1E-19 2.3E-24 189.5 21.2 105 39-194 129-233 (371)
50 PLN02211 methyl indole-3-aceta 99.8 2E-19 4.3E-24 182.8 22.4 105 39-192 16-121 (273)
51 PRK05077 frsA fermentation/res 99.8 1.1E-18 2.4E-23 188.0 25.6 136 5-193 162-300 (414)
52 COG0429 Predicted hydrolase of 99.8 1.4E-18 3E-23 178.5 22.8 290 11-451 49-341 (345)
53 PRK05855 short chain dehydroge 99.8 7.1E-19 1.5E-23 193.5 21.1 122 15-190 6-128 (582)
54 TIGR03100 hydr1_PEP hydrolase, 99.8 1.5E-17 3.2E-22 169.1 22.6 86 93-194 49-135 (274)
55 PLN02980 2-oxoglutarate decarb 99.8 1.3E-17 2.7E-22 205.2 25.6 138 8-192 1341-1479(1655)
56 PRK10566 esterase; Provisional 99.8 9.2E-18 2E-22 165.9 19.1 116 24-178 13-130 (249)
57 PF00561 Abhydrolase_1: alpha/ 99.8 2.2E-18 4.8E-23 164.9 12.4 78 102-192 1-78 (230)
58 KOG1838|consensus 99.7 1.1E-16 2.3E-21 169.5 21.8 144 8-193 90-235 (409)
59 TIGR01839 PHA_synth_II poly(R) 99.7 4.8E-16 1E-20 171.0 25.2 116 39-197 213-332 (560)
60 PRK06765 homoserine O-acetyltr 99.7 2.8E-16 6.1E-21 168.1 22.4 68 379-449 318-387 (389)
61 KOG2382|consensus 99.7 1.5E-15 3.3E-20 156.2 19.5 110 39-193 50-161 (315)
62 PF12695 Abhydrolase_5: Alpha/ 99.7 8.3E-16 1.8E-20 138.5 13.1 92 43-191 1-93 (145)
63 COG3243 PhaC Poly(3-hydroxyalk 99.7 2.9E-15 6.3E-20 158.0 18.5 287 38-451 104-400 (445)
64 COG1506 DAP2 Dipeptidyl aminop 99.7 4.2E-15 9.2E-20 167.8 20.9 256 5-453 359-619 (620)
65 PRK11071 esterase YqiA; Provis 99.6 4.5E-15 9.7E-20 143.7 16.2 91 42-194 2-94 (190)
66 TIGR03101 hydr2_PEP hydrolase, 99.6 2E-15 4.3E-20 153.9 14.3 134 13-194 2-135 (266)
67 KOG1552|consensus 99.6 1.1E-14 2.3E-19 145.6 17.2 129 10-194 34-164 (258)
68 TIGR01849 PHB_depoly_PhaZ poly 99.6 3.9E-14 8.5E-19 151.7 22.4 84 363-450 319-406 (406)
69 COG4757 Predicted alpha/beta h 99.6 5.9E-15 1.3E-19 144.9 13.0 134 14-197 8-142 (281)
70 KOG4391|consensus 99.6 1.2E-14 2.7E-19 141.3 14.0 132 5-191 48-182 (300)
71 PLN00021 chlorophyllase 99.6 2.3E-13 5E-18 141.8 20.3 106 39-194 50-167 (313)
72 COG0596 MhpC Predicted hydrola 99.5 4.4E-13 9.6E-18 125.9 19.0 102 41-194 21-124 (282)
73 PF00326 Peptidase_S9: Prolyl 99.5 6E-14 1.3E-18 136.4 12.6 69 383-453 143-212 (213)
74 KOG2984|consensus 99.5 1.5E-13 3.2E-18 132.7 13.5 65 379-449 211-275 (277)
75 COG2021 MET2 Homoserine acetyl 99.5 8.1E-13 1.8E-17 138.1 19.7 146 15-185 24-177 (368)
76 PRK11460 putative hydrolase; P 99.5 7.6E-13 1.6E-17 131.8 17.1 70 384-460 148-218 (232)
77 TIGR02821 fghA_ester_D S-formy 99.5 5.4E-12 1.2E-16 128.4 23.6 119 39-194 40-174 (275)
78 PLN02442 S-formylglutathione h 99.5 8.7E-12 1.9E-16 127.8 23.1 123 39-194 45-179 (283)
79 PF05448 AXE1: Acetyl xylan es 99.5 2E-12 4.3E-17 135.2 18.1 141 8-191 53-207 (320)
80 TIGR01840 esterase_phb esteras 99.4 3.8E-12 8.3E-17 124.4 16.9 117 39-193 11-130 (212)
81 PF01738 DLH: Dienelactone hyd 99.4 2.4E-12 5.2E-17 125.9 13.2 70 380-450 141-217 (218)
82 PF06342 DUF1057: Alpha/beta h 99.4 1.2E-10 2.6E-15 118.2 22.5 130 14-197 9-141 (297)
83 TIGR00976 /NonD putative hydro 99.4 1.9E-11 4.2E-16 136.3 18.2 129 16-194 1-133 (550)
84 KOG4667|consensus 99.3 1.9E-11 4E-16 119.4 15.2 98 39-178 31-128 (269)
85 PF06500 DUF1100: Alpha/beta h 99.3 4.7E-11 1E-15 127.6 17.5 137 5-194 159-297 (411)
86 PRK10162 acetyl esterase; Prov 99.3 3E-10 6.5E-15 118.4 21.6 129 11-195 57-197 (318)
87 COG0412 Dienelactone hydrolase 99.3 2.3E-10 5E-15 114.8 19.8 126 12-177 3-134 (236)
88 PF04083 Abhydro_lipase: Parti 99.3 2.9E-12 6.2E-17 103.0 4.7 58 2-59 3-61 (63)
89 KOG2564|consensus 99.3 1E-11 2.3E-16 125.1 9.7 107 39-190 72-179 (343)
90 PF02230 Abhydrolase_2: Phosph 99.3 1.2E-10 2.6E-15 114.2 15.7 60 384-450 155-215 (216)
91 PRK10115 protease 2; Provision 99.2 3.7E-10 8.1E-15 129.3 20.3 147 6-195 411-561 (686)
92 cd00707 Pancreat_lipase_like P 99.2 2.1E-11 4.5E-16 124.8 8.7 111 39-194 34-148 (275)
93 TIGR03230 lipo_lipase lipoprot 99.2 6.5E-11 1.4E-15 128.3 12.2 110 39-193 39-154 (442)
94 TIGR03502 lipase_Pla1_cef extr 99.1 3E-10 6.5E-15 130.1 11.8 127 15-175 421-575 (792)
95 COG2945 Predicted hydrolase of 99.1 2E-09 4.3E-14 103.8 15.3 87 91-193 50-137 (210)
96 PF12146 Hydrolase_4: Putative 99.1 2.3E-10 5E-15 96.0 6.7 78 21-145 1-78 (79)
97 PF10230 DUF2305: Uncharacteri 99.0 2.9E-08 6.2E-13 101.4 20.5 117 41-194 2-123 (266)
98 PF00975 Thioesterase: Thioest 99.0 1.9E-08 4E-13 98.3 17.6 102 42-191 1-102 (229)
99 COG3458 Acetyl esterase (deace 99.0 1.2E-08 2.6E-13 103.0 15.3 136 14-191 59-208 (321)
100 COG0400 Predicted esterase [Ge 99.0 1E-08 2.2E-13 101.2 14.7 59 384-450 146-205 (207)
101 PF02129 Peptidase_S15: X-Pro 99.0 3.5E-08 7.5E-13 100.3 18.5 135 20-195 1-138 (272)
102 PF02273 Acyl_transf_2: Acyl t 99.0 3.6E-08 7.9E-13 98.3 17.7 118 12-175 3-121 (294)
103 PRK05371 x-prolyl-dipeptidyl a 99.0 1.9E-08 4.1E-13 116.5 18.1 89 92-194 270-374 (767)
104 PF06821 Ser_hydrolase: Serine 98.9 8.2E-09 1.8E-13 98.8 12.2 91 44-194 1-92 (171)
105 PF08538 DUF1749: Protein of u 98.9 2.1E-08 4.6E-13 103.5 15.5 114 40-200 32-155 (303)
106 PF11339 DUF3141: Protein of u 98.9 4E-07 8.7E-12 99.1 24.7 98 93-208 93-193 (581)
107 PF12715 Abhydrolase_7: Abhydr 98.9 1.1E-08 2.4E-13 108.2 10.9 164 5-191 82-258 (390)
108 PF07819 PGAP1: PGAP1-like pro 98.9 2.3E-08 4.9E-13 99.8 12.6 110 40-195 3-125 (225)
109 PF05728 UPF0227: Uncharacteri 98.8 1.4E-07 2.9E-12 91.8 17.2 90 44-195 2-93 (187)
110 PF03096 Ndr: Ndr family; Int 98.8 7.7E-08 1.7E-12 98.6 15.8 136 13-196 1-137 (283)
111 COG3208 GrsT Predicted thioest 98.8 1.5E-07 3.2E-12 94.2 17.4 63 381-449 173-235 (244)
112 PF07859 Abhydrolase_3: alpha/ 98.8 6.6E-08 1.4E-12 93.4 13.9 87 92-195 19-112 (211)
113 KOG2931|consensus 98.8 1.7E-06 3.6E-11 88.5 23.3 141 8-195 19-159 (326)
114 KOG3043|consensus 98.8 1.8E-08 3.9E-13 99.3 8.8 72 379-451 159-241 (242)
115 PF12740 Chlorophyllase2: Chlo 98.7 1.3E-07 2.7E-12 96.1 13.7 106 39-194 15-132 (259)
116 PF01674 Lipase_2: Lipase (cla 98.7 1.1E-08 2.4E-13 101.7 5.5 92 41-176 1-96 (219)
117 PF03583 LIP: Secretory lipase 98.7 3.1E-07 6.7E-12 95.0 16.4 65 384-454 219-285 (290)
118 KOG2100|consensus 98.6 8.8E-07 1.9E-11 102.6 17.2 72 379-452 676-749 (755)
119 PF07224 Chlorophyllase: Chlor 98.6 2.2E-07 4.8E-12 93.6 10.6 106 39-195 44-159 (307)
120 KOG2565|consensus 98.6 1E-06 2.3E-11 92.3 15.0 97 41-183 152-257 (469)
121 COG3571 Predicted hydrolase of 98.5 2.3E-06 5E-11 80.7 14.9 108 41-190 14-121 (213)
122 COG0657 Aes Esterase/lipase [L 98.5 3.2E-06 6.9E-11 87.4 17.6 88 93-197 102-195 (312)
123 PLN02733 phosphatidylcholine-s 98.5 2.9E-07 6.3E-12 100.4 8.7 89 92-193 112-201 (440)
124 PTZ00472 serine carboxypeptida 98.5 3.1E-05 6.6E-10 85.3 24.5 147 21-194 60-217 (462)
125 PF08840 BAAT_C: BAAT / Acyl-C 98.5 1.2E-06 2.7E-11 86.5 11.5 50 142-195 7-58 (213)
126 PF06028 DUF915: Alpha/beta hy 98.4 7.6E-06 1.6E-10 83.4 15.6 122 39-194 9-144 (255)
127 PF05990 DUF900: Alpha/beta hy 98.4 1.1E-06 2.5E-11 88.1 8.5 116 39-195 16-139 (233)
128 PF09752 DUF2048: Uncharacteri 98.4 2E-05 4.3E-10 83.0 17.7 102 39-178 90-198 (348)
129 PF03403 PAF-AH_p_II: Platelet 98.3 2.9E-06 6.4E-11 91.0 11.7 40 39-111 98-137 (379)
130 COG4188 Predicted dienelactone 98.3 2.7E-06 5.8E-11 89.8 10.1 100 40-178 70-182 (365)
131 COG3545 Predicted esterase of 98.3 2.3E-05 5E-10 75.1 15.4 63 383-449 116-178 (181)
132 PRK10252 entF enterobactin syn 98.3 1.2E-06 2.5E-11 106.5 8.5 104 39-191 1066-1169(1296)
133 PF06057 VirJ: Bacterial virul 98.2 1.2E-05 2.7E-10 78.1 12.3 90 90-194 18-108 (192)
134 PF10503 Esterase_phd: Esteras 98.2 7.9E-06 1.7E-10 81.5 10.4 99 39-180 14-122 (220)
135 KOG4627|consensus 98.2 2.9E-05 6.2E-10 76.1 13.2 84 93-194 89-173 (270)
136 COG3509 LpqC Poly(3-hydroxybut 98.1 2.1E-05 4.6E-10 80.8 12.2 122 20-183 43-172 (312)
137 PF03959 FSH1: Serine hydrolas 98.1 2.9E-06 6.4E-11 83.5 5.7 45 380-427 157-201 (212)
138 KOG1515|consensus 98.1 0.00026 5.6E-09 74.9 19.7 88 92-196 113-210 (336)
139 COG3319 Thioesterase domains o 98.0 1E-05 2.2E-10 82.4 7.5 104 42-194 1-104 (257)
140 KOG2281|consensus 98.0 0.00017 3.7E-09 80.3 17.3 146 10-195 612-764 (867)
141 PF05057 DUF676: Putative seri 98.0 9.5E-06 2.1E-10 80.4 6.7 41 133-174 55-97 (217)
142 PF00151 Lipase: Lipase; Inte 98.0 6.1E-06 1.3E-10 87.1 4.7 113 39-194 69-188 (331)
143 COG4099 Predicted peptidase [G 98.0 5.1E-05 1.1E-09 77.9 10.9 41 147-190 259-301 (387)
144 COG2936 Predicted acyl esteras 97.9 5.7E-05 1.2E-09 84.1 11.1 143 6-194 14-160 (563)
145 COG1075 LipA Predicted acetylt 97.9 2.7E-05 5.9E-10 82.3 7.0 106 40-195 58-166 (336)
146 PRK04940 hypothetical protein; 97.8 0.0011 2.5E-08 64.1 16.1 52 387-448 127-178 (180)
147 PF00756 Esterase: Putative es 97.7 7.6E-05 1.7E-09 74.1 7.6 50 144-196 102-153 (251)
148 COG1073 Hydrolases of the alph 97.7 0.00056 1.2E-08 67.8 13.8 71 379-450 226-297 (299)
149 PF05677 DUF818: Chlamydia CHL 97.7 0.0004 8.8E-09 72.9 12.9 123 11-177 112-237 (365)
150 KOG2551|consensus 97.7 0.00092 2E-08 66.4 14.5 64 379-451 158-221 (230)
151 smart00824 PKS_TE Thioesterase 97.7 0.00012 2.5E-09 69.0 7.6 83 93-191 18-100 (212)
152 KOG1553|consensus 97.5 0.0004 8.6E-09 72.7 9.8 129 12-194 215-346 (517)
153 COG4782 Uncharacterized protei 97.5 0.00034 7.4E-09 73.9 9.3 113 39-196 114-237 (377)
154 PF02450 LCAT: Lecithin:choles 97.5 0.0003 6.5E-09 75.8 8.1 84 91-193 68-160 (389)
155 PF00450 Peptidase_S10: Serine 97.4 0.0099 2.2E-07 63.4 19.0 156 15-195 15-183 (415)
156 KOG3724|consensus 97.4 0.00071 1.5E-08 77.0 10.5 150 12-193 58-220 (973)
157 COG0627 Predicted esterase [Ge 97.3 0.00031 6.6E-09 73.8 6.0 64 131-197 127-191 (316)
158 KOG2112|consensus 97.3 0.0022 4.8E-08 63.1 11.4 59 384-449 144-203 (206)
159 KOG3253|consensus 97.3 0.002 4.3E-08 71.7 12.0 70 379-451 299-375 (784)
160 KOG3975|consensus 97.3 0.016 3.5E-07 58.7 17.4 114 39-193 27-147 (301)
161 KOG3101|consensus 97.3 0.00013 2.8E-09 71.9 2.4 126 40-199 43-182 (283)
162 PRK10439 enterobactin/ferric e 97.1 0.0056 1.2E-07 66.6 13.4 37 153-192 286-322 (411)
163 PF05577 Peptidase_S28: Serine 97.1 0.0032 6.9E-08 68.5 11.1 95 93-193 50-148 (434)
164 cd00312 Esterase_lipase Estera 97.0 0.0061 1.3E-07 67.0 11.9 79 102-193 126-213 (493)
165 PF11288 DUF3089: Protein of u 97.0 0.0024 5.3E-08 63.1 7.7 91 94-191 39-134 (207)
166 COG4814 Uncharacterized protei 96.7 0.005 1.1E-07 62.4 7.6 102 41-177 45-158 (288)
167 PLN02606 palmitoyl-protein thi 96.7 0.0081 1.8E-07 62.6 9.4 35 156-191 96-130 (306)
168 KOG2541|consensus 96.7 0.0081 1.8E-07 61.3 9.1 101 42-191 24-126 (296)
169 PLN02517 phosphatidylcholine-s 96.6 0.0047 1E-07 69.4 7.0 92 91-192 159-262 (642)
170 PF12048 DUF3530: Protein of u 96.6 0.047 1E-06 57.3 14.2 144 11-193 62-229 (310)
171 PF05705 DUF829: Eukaryotic pr 96.5 0.069 1.5E-06 53.2 14.7 64 382-447 176-240 (240)
172 PF08386 Abhydrolase_4: TAP-li 96.4 0.014 3.1E-07 51.2 7.8 60 384-449 34-93 (103)
173 KOG3847|consensus 96.4 0.0035 7.5E-08 65.2 4.3 44 39-115 116-159 (399)
174 PF00135 COesterase: Carboxyle 96.4 0.017 3.7E-07 63.4 10.0 133 17-193 104-245 (535)
175 COG1505 Serine proteases of th 96.4 0.029 6.4E-07 62.8 11.6 131 7-179 390-524 (648)
176 KOG4840|consensus 96.3 0.0089 1.9E-07 59.6 6.8 108 41-196 36-147 (299)
177 cd00741 Lipase Lipase. Lipase 96.2 0.0074 1.6E-07 55.9 5.5 54 140-193 13-67 (153)
178 PF06850 PHB_depo_C: PHB de-po 96.2 0.0054 1.2E-07 60.0 4.4 87 360-450 112-202 (202)
179 PF02089 Palm_thioest: Palmito 96.1 0.0071 1.5E-07 62.4 5.2 35 155-191 80-114 (279)
180 PLN02633 palmitoyl protein thi 96.0 0.037 8E-07 57.9 9.9 105 40-191 24-129 (314)
181 COG2272 PnbA Carboxylesterase 96.0 0.033 7.1E-07 61.3 9.8 133 16-194 74-218 (491)
182 KOG2237|consensus 96.0 0.011 2.4E-07 66.5 6.2 145 7-194 437-585 (712)
183 KOG2369|consensus 96.0 0.0093 2E-07 65.1 5.5 85 92-191 128-223 (473)
184 PF10142 PhoPQ_related: PhoPQ- 96.0 0.078 1.7E-06 57.0 12.2 66 382-455 260-325 (367)
185 COG3150 Predicted esterase [Ge 95.4 0.047 1E-06 52.4 7.1 50 140-195 44-93 (191)
186 COG4553 DepA Poly-beta-hydroxy 95.4 0.43 9.3E-06 49.7 14.3 75 379-454 333-411 (415)
187 KOG1282|consensus 95.3 1.3 2.8E-05 49.0 19.0 154 15-195 48-215 (454)
188 PF04301 DUF452: Protein of un 95.2 0.64 1.4E-05 46.4 14.6 37 388-430 169-205 (213)
189 PF01764 Lipase_3: Lipase (cla 95.1 0.032 6.9E-07 50.3 4.9 37 140-176 49-85 (140)
190 COG1770 PtrB Protease II [Amin 95.1 0.1 2.2E-06 59.3 9.6 144 9-195 417-564 (682)
191 PF10340 DUF2424: Protein of u 94.6 0.11 2.4E-06 55.9 8.1 57 140-196 180-238 (374)
192 cd00519 Lipase_3 Lipase (class 94.6 0.041 8.9E-07 54.4 4.4 37 140-176 113-149 (229)
193 KOG1551|consensus 94.3 0.39 8.5E-06 49.3 10.6 59 387-451 309-367 (371)
194 PF11144 DUF2920: Protein of u 94.2 0.33 7.1E-06 52.7 10.6 49 140-191 165-217 (403)
195 KOG2183|consensus 94.1 0.18 4E-06 54.5 8.3 96 101-198 111-208 (492)
196 PF05576 Peptidase_S37: PS-10 93.0 5.4 0.00012 43.6 17.1 80 103-192 90-169 (448)
197 KOG2182|consensus 93.0 0.78 1.7E-05 50.8 11.0 118 39-190 84-204 (514)
198 COG3946 VirJ Type IV secretory 92.8 0.3 6.4E-06 52.8 7.2 104 40-177 245-348 (456)
199 KOG3967|consensus 92.5 0.65 1.4E-05 46.4 8.7 119 40-185 100-219 (297)
200 COG2939 Carboxypeptidase C (ca 92.2 0.86 1.9E-05 50.6 10.1 141 39-202 99-246 (498)
201 PF07082 DUF1350: Protein of u 91.8 0.75 1.6E-05 46.9 8.5 69 91-177 37-112 (250)
202 PLN02209 serine carboxypeptida 91.6 1.8 3.8E-05 47.8 11.8 153 19-194 49-213 (437)
203 PLN00413 triacylglycerol lipas 91.5 0.22 4.9E-06 54.9 4.7 39 136-174 265-303 (479)
204 PLN03016 sinapoylglucose-malat 91.5 1.1 2.3E-05 49.4 10.0 155 13-193 39-210 (433)
205 PF11187 DUF2974: Protein of u 91.4 0.35 7.5E-06 48.6 5.6 50 143-193 73-123 (224)
206 PLN02454 triacylglycerol lipas 90.7 0.31 6.7E-06 53.1 4.8 36 140-175 211-248 (414)
207 PLN02571 triacylglycerol lipas 89.9 0.46 1E-05 51.8 5.2 36 140-175 209-246 (413)
208 PLN02162 triacylglycerol lipas 89.5 0.43 9.4E-06 52.6 4.7 36 139-174 262-297 (475)
209 PF01083 Cutinase: Cutinase; 89.5 0.57 1.2E-05 45.2 5.1 55 140-194 66-123 (179)
210 PLN02934 triacylglycerol lipas 89.2 0.43 9.3E-06 53.2 4.4 39 136-174 302-340 (515)
211 PLN02408 phospholipase A1 87.5 0.69 1.5E-05 49.7 4.6 36 140-175 183-220 (365)
212 KOG4372|consensus 87.2 0.52 1.1E-05 51.0 3.4 21 152-172 147-167 (405)
213 COG2819 Predicted hydrolase of 86.7 0.75 1.6E-05 47.3 4.1 41 152-195 134-174 (264)
214 PLN02802 triacylglycerol lipas 85.1 0.98 2.1E-05 50.4 4.3 36 140-175 313-350 (509)
215 PLN02324 triacylglycerol lipas 83.7 1.4 3.1E-05 48.0 4.8 36 140-175 198-235 (415)
216 PLN02753 triacylglycerol lipas 83.7 1.2 2.7E-05 49.8 4.3 36 140-175 292-332 (531)
217 PLN02310 triacylglycerol lipas 83.3 1.4 3E-05 48.1 4.4 35 140-174 190-228 (405)
218 PLN02761 lipase class 3 family 83.2 1.3 2.8E-05 49.6 4.3 36 140-175 273-314 (527)
219 PF06259 Abhydrolase_8: Alpha/ 83.2 2.2 4.8E-05 41.4 5.4 44 140-183 93-137 (177)
220 PLN02719 triacylglycerol lipas 82.8 1.4 3E-05 49.2 4.3 36 140-175 278-318 (518)
221 PF07519 Tannase: Tannase and 81.7 3.1 6.7E-05 46.4 6.5 64 385-449 354-426 (474)
222 PLN03037 lipase class 3 family 80.2 2.1 4.6E-05 47.9 4.6 35 141-175 300-338 (525)
223 KOG1516|consensus 79.5 7 0.00015 43.7 8.5 69 94-174 137-214 (545)
224 PF06441 EHN: Epoxide hydrolas 79.4 2.6 5.6E-05 37.9 4.1 40 14-58 70-109 (112)
225 KOG4569|consensus 78.2 2.5 5.4E-05 44.9 4.3 36 140-175 156-191 (336)
226 PLN02847 triacylglycerol lipas 78.1 2.7 5.8E-05 47.9 4.5 33 143-175 239-271 (633)
227 PF05277 DUF726: Protein of un 70.2 7.1 0.00015 41.9 5.2 42 152-193 217-260 (345)
228 KOG2521|consensus 70.1 74 0.0016 34.3 12.8 71 384-456 225-296 (350)
229 KOG2029|consensus 66.8 7.7 0.00017 44.1 4.7 30 423-452 660-689 (697)
230 COG2382 Fes Enterochelin ester 63.6 4.2 9E-05 42.6 1.9 36 155-193 177-212 (299)
231 COG4287 PqaA PhoPQ-activated p 60.6 35 0.00075 37.1 8.0 45 382-428 327-371 (507)
232 KOG2624|consensus 55.4 6.7 0.00014 42.9 1.8 49 324-372 331-390 (403)
233 COG4947 Uncharacterized protei 50.6 13 0.00028 36.3 2.7 43 143-185 89-131 (227)
234 PF07519 Tannase: Tannase and 50.3 18 0.0004 40.3 4.2 40 154-196 114-153 (474)
235 COG5153 CVT17 Putative lipase 48.0 26 0.00057 36.8 4.6 35 142-176 263-297 (425)
236 KOG4540|consensus 48.0 26 0.00057 36.8 4.6 35 142-176 263-297 (425)
237 PLN02213 sinapoylglucose-malat 47.4 48 0.001 34.8 6.6 62 384-449 233-316 (319)
238 PF08237 PE-PPE: PE-PPE domain 46.7 45 0.00098 33.5 6.0 23 154-176 47-69 (225)
239 PLN02213 sinapoylglucose-malat 44.5 58 0.0013 34.2 6.7 64 103-175 3-71 (319)
240 COG0529 CysC Adenylylsulfate k 42.5 34 0.00075 33.6 4.2 39 39-108 20-58 (197)
241 KOG4388|consensus 39.9 30 0.00066 39.6 3.8 21 155-175 469-489 (880)
242 PLN02209 serine carboxypeptida 38.3 80 0.0017 35.0 6.8 62 384-449 351-434 (437)
243 TIGR03712 acc_sec_asp2 accesso 37.3 66 0.0014 36.2 5.9 37 140-176 340-378 (511)
244 PLN03016 sinapoylglucose-malat 36.2 95 0.002 34.3 7.0 62 384-449 347-430 (433)
245 KOG2093|consensus 35.9 20 0.00044 42.5 1.8 47 504-551 901-948 (1016)
246 KOG1202|consensus 34.2 67 0.0014 40.0 5.5 54 132-190 2163-2216(2376)
247 smart00827 PKS_AT Acyl transfe 33.4 49 0.0011 33.7 4.0 26 148-173 75-100 (298)
248 TIGR03131 malonate_mdcH malona 31.7 55 0.0012 33.5 4.0 28 147-174 68-95 (295)
249 PF00698 Acyl_transf_1: Acyl t 31.1 34 0.00074 35.6 2.4 28 146-173 75-102 (318)
250 TIGR00128 fabD malonyl CoA-acy 29.6 58 0.0013 32.9 3.8 27 148-174 75-102 (290)
251 PF02006 DUF137: Protein of un 29.6 1.1E+02 0.0023 29.8 5.2 39 72-110 81-119 (178)
252 PF10503 Esterase_phd: Esteras 28.7 48 0.001 33.3 2.9 27 385-411 170-196 (220)
253 PRK12467 peptide synthase; Pro 26.5 1.5E+02 0.0032 41.9 7.8 86 41-175 3692-3777(3956)
254 PRK13761 hypothetical protein; 26.4 1.2E+02 0.0026 30.8 5.1 39 72-110 142-180 (248)
255 COG1073 Hydrolases of the alph 25.6 9.1 0.0002 37.6 -2.9 105 39-178 47-155 (299)
256 TIGR03586 PseI pseudaminic aci 24.7 2.7E+02 0.0058 29.8 7.8 83 40-177 133-216 (327)
257 PF10605 3HBOH: 3HB-oligomer h 23.8 43 0.00092 38.6 1.6 49 384-432 555-608 (690)
258 COG4822 CbiK Cobalamin biosynt 21.9 3.2E+02 0.0069 27.8 7.0 64 39-161 136-200 (265)
259 cd01714 ETF_beta The electron 20.1 3.2E+02 0.007 26.7 6.8 62 93-176 68-134 (202)
No 1
>KOG2624|consensus
Probab=100.00 E-value=3.3e-56 Score=472.23 Aligned_cols=359 Identities=47% Similarity=0.873 Sum_probs=333.0
Q ss_pred ccccccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCC
Q psy3848 2 KIIRRHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSS 81 (552)
Q Consensus 2 ~~~~~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~ 81 (552)
++|+.+|||+|+|.|+|+|||.|.+||||++. +++|||+|+||+.+++..|..
T Consensus 39 ~~i~~~gy~~E~h~V~T~DgYiL~lhRIp~~~-----~~rp~Vll~HGLl~sS~~Wv~---------------------- 91 (403)
T KOG2624|consen 39 EIIEKYGYPVEEHEVTTEDGYILTLHRIPRGK-----KKRPVVLLQHGLLASSSSWVL---------------------- 91 (403)
T ss_pred HHHHHcCCceEEEEEEccCCeEEEEeeecCCC-----CCCCcEEEeecccccccccee----------------------
Confidence 57899999999999999999999999999875 689999999999999998888
Q ss_pred CccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCC-cccccccChhhhhhccHHHHHHHHHHHcCCCcEEEE
Q psy3848 82 ADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPM-DLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYI 160 (552)
Q Consensus 82 ~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~-~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lV 160 (552)
|.|+++++..|+++||+||+.+.||..+|++|..+++. +.+||+||++||+.+|||+.|++|++.++.+++++|
T Consensus 92 -----n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yv 166 (403)
T KOG2624|consen 92 -----NGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYV 166 (403)
T ss_pred -----cCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEE
Confidence 99999999999999999999999999999999999996 777999999999999999999999999999999999
Q ss_pred EechhHHHHHHHHHcCCcchhchheeeeccccccccCCCchh-hhhhhhhhhHHHHHHHhcCccccchhhhHHHHHHHHH
Q psy3848 161 GHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSRTRSPI-RYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIAC 239 (552)
Q Consensus 161 GHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~~~~~~pl-~~l~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~ 239 (552)
|||+|++++++.++.+|+..++|..++++||+++.....++. ..+..+......+...+|..++++.+.+.+.+.+..|
T Consensus 167 GHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C 246 (403)
T KOG2624|consen 167 GHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKIC 246 (403)
T ss_pred EEEccchhheehhcccchhhhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHh
Confidence 999999999999999999999999999999999888777776 4444444444456667888999999999999999999
Q ss_pred hhhhhhhhhhHHHHHHHhCCCCccccccchHHHhccCCCCcchhhHHHHHhhhccccccccccCcccccccccCCCCCCc
Q psy3848 240 ELNHMEMKRCEDFLFILCGHDPYQFKMSLLPVILGHTPAGGSTRTLVHFAQFIDSGKFRQFDYGKDENLHIYNSTFPPKY 319 (552)
Q Consensus 240 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~q~~~~~~f~~~d~~~~~n~~~y~~~~p~~~ 319 (552)
.........|..+++.++|++..+++..+.+.+..+.|+++|++++.||+|...+++|++||+|..+|...|++.+||.|
T Consensus 247 ~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y 326 (403)
T KOG2624|consen 247 SGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEY 326 (403)
T ss_pred cchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCC
Confidence 97667789999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccccceeeeccccccchhhhHHHhhcccchhhhhhccccccccccccccCCCCCCCCCCCccccEEEEEeCCCCCCC
Q psy3848 320 DLKFISTKVAFFYADNDLLTNEQVTIRLGLVDLFRKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTN 399 (552)
Q Consensus 320 ~~~~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PvLii~G~~D~i~p 399 (552)
++.+|++||.+++|++|.+++
T Consensus 327 -----------------------------------------------------------~l~~i~~P~~l~~g~~D~l~~ 347 (403)
T KOG2624|consen 327 -----------------------------------------------------------DLTNIKVPTALYYGDNDWLAD 347 (403)
T ss_pred -----------------------------------------------------------CccccccCEEEEecCCcccCC
Confidence 999999999999999999999
Q ss_pred HHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhc
Q psy3848 400 EQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFS 451 (552)
Q Consensus 400 ~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~ 451 (552)
+++++.+...+++......+.+++++|+||+|+.+++++||+.|++.++...
T Consensus 348 ~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 348 PEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred HHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 9999999999998775445558999999999999999999999999998765
No 2
>PLN02872 triacylglycerol lipase
Probab=100.00 E-value=1.5e-52 Score=446.92 Aligned_cols=355 Identities=30% Similarity=0.581 Sum_probs=311.0
Q ss_pred CccccccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCC
Q psy3848 1 PKIIRRHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGS 80 (552)
Q Consensus 1 ~~~~~~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~ 80 (552)
+++|+++|||+|+|.|+|+||+.|.++|++.........++++|+|+||+++++..|..
T Consensus 34 ~~~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~--------------------- 92 (395)
T PLN02872 34 AQLIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFL--------------------- 92 (395)
T ss_pred HHHHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceee---------------------
Confidence 36899999999999999999999999999854322222457899999999999999987
Q ss_pred CCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEE
Q psy3848 81 SADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYI 160 (552)
Q Consensus 81 ~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lV 160 (552)
+.+.++++..|+++||+||++|+||+|+|.+|..+++.+.+||++++++++.+|++++|+++++..+ +++++|
T Consensus 93 ------~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~V 165 (395)
T PLN02872 93 ------NSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIV 165 (395)
T ss_pred ------cCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEE
Confidence 6677789999999999999999999999999988888888899999999998899999999987665 789999
Q ss_pred EechhHHHHHHHHHcCCcchhchheeeeccccccccCCCchhh-hhhhhhhhHHHHHHHhcCccccchhhhHHHHHHHHH
Q psy3848 161 GHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSRTRSPIR-YLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIAC 239 (552)
Q Consensus 161 GHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~~~~~~pl~-~l~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~ 239 (552)
||||||++++.++ .+|++++++..+++++|+++.....+++. .+.. ..+..+...+|..++++.......+...+|
T Consensus 166 GhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C 242 (395)
T PLN02872 166 GHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVF--MHLDQMVVAMGIHQLNFRSDVLVKLLDSIC 242 (395)
T ss_pred EECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHH--HhHHHHHHHhcCceecCCcHHHHHHHHHHc
Confidence 9999999999655 67999999999999999999988888772 2221 123445567899999998888888888899
Q ss_pred hhhhhhhhhhHHHHHHHhCCCCccccccchHHHhccCCCCcchhhHHHHHhhhccccccccccCcccccccccCCCCCCc
Q psy3848 240 ELNHMEMKRCEDFLFILCGHDPYQFKMSLLPVILGHTPAGGSTRTLVHFAQFIDSGKFRQFDYGKDENLHIYNSTFPPKY 319 (552)
Q Consensus 240 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~q~~~~~~f~~~d~~~~~n~~~y~~~~p~~~ 319 (552)
... ..|..+++.++|.+ ..++...++.+..+.|+++|++++.||.|.+++++|++||+|..+|+..|++..||.|
T Consensus 243 ~~~----~~c~~~~~~~~g~~-~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y 317 (395)
T PLN02872 243 EGH----MDCNDLLTSITGTN-CCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAF 317 (395)
T ss_pred cCc----hhHHHHHHHHhCCC-cccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCc
Confidence 642 24999999999988 5699999999999999999999999999999999999999998889999999999998
Q ss_pred cccccccceeeeccccccchhhhHHHhhcccchhhhhhccccccccccccccCCCCCCCCCCCc--cccEEEEEeCCCCC
Q psy3848 320 DLKFISTKVAFFYADNDLLTNEQVTIRLGLVDLFRKFRQFDYGKDENLHIYNSTFPPKYDLKFI--STKVAFFYADNDLL 397 (552)
Q Consensus 320 ~~~~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~I--~~PvLii~G~~D~i 397 (552)
+|++| ++|+++++|++|.+
T Consensus 318 -----------------------------------------------------------~l~~i~~~~Pv~i~~G~~D~l 338 (395)
T PLN02872 318 -----------------------------------------------------------DLSLIPKSLPLWMGYGGTDGL 338 (395)
T ss_pred -----------------------------------------------------------CcccCCCCccEEEEEcCCCCC
Confidence 88888 58999999999999
Q ss_pred CCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhcc
Q psy3848 398 TNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSK 452 (552)
Q Consensus 398 ~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~~ 452 (552)
+++++++++.+.+|+.. ..+.++++||++|+++.+++++|++.|++||+++.+
T Consensus 339 v~~~dv~~l~~~Lp~~~--~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 339 ADVTDVEHTLAELPSKP--ELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred CCHHHHHHHHHHCCCcc--EEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 99999999999999854 477789999999999999999999999999986543
No 3
>PHA02857 monoglyceride lipase; Provisional
Probab=99.94 E-value=2.9e-25 Score=222.74 Aligned_cols=129 Identities=19% Similarity=0.177 Sum_probs=103.3
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHH
Q psy3848 16 VQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAY 95 (552)
Q Consensus 16 V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~ 95 (552)
+...||..|.+..+.++. ..++.|||+||+++++..|.. ++.
T Consensus 5 ~~~~~g~~l~~~~~~~~~-----~~~~~v~llHG~~~~~~~~~~---------------------------------~~~ 46 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPIT-----YPKALVFISHGAGEHSGRYEE---------------------------------LAE 46 (276)
T ss_pred eecCCCCEEEEEeccCCC-----CCCEEEEEeCCCccccchHHH---------------------------------HHH
Confidence 456799999998886642 456788888999999999988 899
Q ss_pred HHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHc
Q psy3848 96 LLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 96 ~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~ 175 (552)
.|+++||+|+++|+||||.|+.+.. + ..++.+++. |+.+.++.+.+.....+++++||||||.+++.+|.+
T Consensus 47 ~l~~~g~~via~D~~G~G~S~~~~~-~-------~~~~~~~~~-d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~ 117 (276)
T PHA02857 47 NISSLGILVFSHDHIGHGRSNGEKM-M-------IDDFGVYVR-DVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYK 117 (276)
T ss_pred HHHhCCCEEEEccCCCCCCCCCccC-C-------cCCHHHHHH-HHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHh
Confidence 9999999999999999999975321 1 124555554 777777777666666789999999999999999999
Q ss_pred CCcchhchheeeecccccc
Q psy3848 176 RPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 176 ~Pe~~~~l~~~I~laP~~~ 194 (552)
+|+ .+.++|+++|...
T Consensus 118 ~p~---~i~~lil~~p~~~ 133 (276)
T PHA02857 118 NPN---LFTAMILMSPLVN 133 (276)
T ss_pred Ccc---ccceEEEeccccc
Confidence 995 4777789998665
No 4
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=2.3e-25 Score=233.08 Aligned_cols=141 Identities=20% Similarity=0.183 Sum_probs=108.2
Q ss_pred ccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCcc-ccccCCcccccccccccccCCCCCCCcc
Q psy3848 6 RHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSAD-WVVAGPDTALGKATYVTSDKGIGSSADW 84 (552)
Q Consensus 6 ~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (552)
..|+..++..+.+.||..|.+..+.+... ..+++|||+||++++... |..
T Consensus 56 ~~~~~~~~~~~~~~~g~~l~~~~~~p~~~----~~~~~iv~lHG~~~~~~~~~~~------------------------- 106 (349)
T PLN02385 56 PSGIKTEESYEVNSRGVEIFSKSWLPENS----RPKAAVCFCHGYGDTCTFFFEG------------------------- 106 (349)
T ss_pred ccCcceeeeeEEcCCCCEEEEEEEecCCC----CCCeEEEEECCCCCccchHHHH-------------------------
Confidence 35677777888899999988877654311 357899999999988765 455
Q ss_pred ccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHH--cCCCcEEEEEe
Q psy3848 85 VVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK--TDHTQMIYIGH 162 (552)
Q Consensus 85 ~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~--~g~~ki~lVGH 162 (552)
++..|+++||+|+++|+||||.|++... . ..++++++. |+.+.++.+... ....+++++||
T Consensus 107 --------~~~~l~~~g~~v~~~D~~G~G~S~~~~~-----~---~~~~~~~~~-dv~~~l~~l~~~~~~~~~~~~LvGh 169 (349)
T PLN02385 107 --------IARKIASSGYGVFAMDYPGFGLSEGLHG-----Y---IPSFDDLVD-DVIEHYSKIKGNPEFRGLPSFLFGQ 169 (349)
T ss_pred --------HHHHHHhCCCEEEEecCCCCCCCCCCCC-----C---cCCHHHHHH-HHHHHHHHHHhccccCCCCEEEEEe
Confidence 7888998999999999999999974211 1 246788886 777777766542 23347999999
Q ss_pred chhHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 163 SMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 163 SmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
||||.+++.++.++|+ .+.++|+++|....
T Consensus 170 SmGG~val~~a~~~p~---~v~glVLi~p~~~~ 199 (349)
T PLN02385 170 SMGGAVALKVHLKQPN---AWDGAILVAPMCKI 199 (349)
T ss_pred ccchHHHHHHHHhCcc---hhhheeEecccccc
Confidence 9999999999999995 56777888886643
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=1.2e-24 Score=222.06 Aligned_cols=132 Identities=19% Similarity=0.209 Sum_probs=102.5
Q ss_pred CCCceEEEEECCC--CcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccc
Q psy3848 8 GYPAESYIVQTED--GYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWV 85 (552)
Q Consensus 8 g~p~e~~~V~t~D--G~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (552)
.||.....++..+ |....+++...+. +++++|||+||+++++..|..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~y~~~G~-----~~~~~lvliHG~~~~~~~w~~-------------------------- 64 (302)
T PRK00870 16 DYPFAPHYVDVDDGDGGPLRMHYVDEGP-----ADGPPVLLLHGEPSWSYLYRK-------------------------- 64 (302)
T ss_pred CCCCCceeEeecCCCCceEEEEEEecCC-----CCCCEEEEECCCCCchhhHHH--------------------------
Confidence 4666666676665 5556676665542 357899999999999999988
Q ss_pred cCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechh
Q psy3848 86 VAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMG 165 (552)
Q Consensus 86 ~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmG 165 (552)
++..|+++||+|+++|+||||.|+.... .. ++++++++. .+..++++++++++++||||||
T Consensus 65 -------~~~~L~~~gy~vi~~Dl~G~G~S~~~~~----~~---~~~~~~~a~-----~l~~~l~~l~~~~v~lvGhS~G 125 (302)
T PRK00870 65 -------MIPILAAAGHRVIAPDLIGFGRSDKPTR----RE---DYTYARHVE-----WMRSWFEQLDLTDVTLVCQDWG 125 (302)
T ss_pred -------HHHHHHhCCCEEEEECCCCCCCCCCCCC----cc---cCCHHHHHH-----HHHHHHHHcCCCCEEEEEEChH
Confidence 8899998899999999999999974321 11 467887774 4445556788899999999999
Q ss_pred HHHHHHHHHcCCcchhchheeeecccc
Q psy3848 166 TTMFYVLTSQRPEYNEKLLGAISLAPV 192 (552)
Q Consensus 166 G~ial~~a~~~Pe~~~~l~~~I~laP~ 192 (552)
|.+++.+|.++|+ ++.++|+++|.
T Consensus 126 g~ia~~~a~~~p~---~v~~lvl~~~~ 149 (302)
T PRK00870 126 GLIGLRLAAEHPD---RFARLVVANTG 149 (302)
T ss_pred HHHHHHHHHhChh---heeEEEEeCCC
Confidence 9999999999995 46666777764
No 6
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=6.6e-25 Score=222.70 Aligned_cols=121 Identities=21% Similarity=0.283 Sum_probs=91.9
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHh
Q psy3848 20 DGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLAD 99 (552)
Q Consensus 20 DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~ 99 (552)
||..+.+... + ..+++|||+||+++++..|.. ++..|++
T Consensus 16 ~~~~i~y~~~--G------~~~~~vlllHG~~~~~~~w~~---------------------------------~~~~L~~ 54 (294)
T PLN02824 16 KGYNIRYQRA--G------TSGPALVLVHGFGGNADHWRK---------------------------------NTPVLAK 54 (294)
T ss_pred cCeEEEEEEc--C------CCCCeEEEECCCCCChhHHHH---------------------------------HHHHHHh
Confidence 6766655443 2 135899999999999999998 8888988
Q ss_pred CCceEEEEcCCCCCCCCCCCCC-CCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCc
Q psy3848 100 KGYDVWLGNARGNTYSRSHISY-SPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPE 178 (552)
Q Consensus 100 ~Gy~Via~D~RG~G~S~~~~~~-sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe 178 (552)
+ |+|+++|+||||.|+..... .+.+. .+++++++. |+.+ ++++++.+++++|||||||++++.+|+++|+
T Consensus 55 ~-~~vi~~DlpG~G~S~~~~~~~~~~~~---~~~~~~~a~-~l~~----~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 125 (294)
T PLN02824 55 S-HRVYAIDLLGYGYSDKPNPRSAPPNS---FYTFETWGE-QLND----FCSDVVGDPAFVICNSVGGVVGLQAAVDAPE 125 (294)
T ss_pred C-CeEEEEcCCCCCCCCCCccccccccc---cCCHHHHHH-HHHH----HHHHhcCCCeEEEEeCHHHHHHHHHHHhChh
Confidence 5 79999999999999853210 00111 478888885 4444 4446678899999999999999999999995
Q ss_pred chhchheeeeccccc
Q psy3848 179 YNEKLLGAISLAPVA 193 (552)
Q Consensus 179 ~~~~l~~~I~laP~~ 193 (552)
++.++|+++|..
T Consensus 126 ---~v~~lili~~~~ 137 (294)
T PLN02824 126 ---LVRGVMLINISL 137 (294)
T ss_pred ---heeEEEEECCCc
Confidence 577778888754
No 7
>PRK10749 lysophospholipase L2; Provisional
Probab=99.93 E-value=2e-24 Score=224.57 Aligned_cols=137 Identities=21% Similarity=0.184 Sum_probs=106.6
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcH
Q psy3848 12 ESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDT 91 (552)
Q Consensus 12 e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 91 (552)
++..+...||..+.+..+... ..+++|||+||++++...|..
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~------~~~~~vll~HG~~~~~~~y~~-------------------------------- 72 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP------HHDRVVVICPGRIESYVKYAE-------------------------------- 72 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC------CCCcEEEEECCccchHHHHHH--------------------------------
Confidence 445566789988888777543 246799999999998888887
Q ss_pred HHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHH
Q psy3848 92 ALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYV 171 (552)
Q Consensus 92 ~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~ 171 (552)
++..|+++||+|+++|+||||.|.......+. ....++++++. |+.+.++.+....+..+++++||||||.+++.
T Consensus 73 -~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~---~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~ 147 (330)
T PRK10749 73 -LAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHR---GHVERFNDYVD-DLAAFWQQEIQPGPYRKRYALAHSMGGAILTL 147 (330)
T ss_pred -HHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCc---CccccHHHHHH-HHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHH
Confidence 88889899999999999999999743210111 11357888887 88888887766567789999999999999999
Q ss_pred HHHcCCcchhchheeeecccccc
Q psy3848 172 LTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 172 ~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
+|+++|+ .+.++|+++|...
T Consensus 148 ~a~~~p~---~v~~lvl~~p~~~ 167 (330)
T PRK10749 148 FLQRHPG---VFDAIALCAPMFG 167 (330)
T ss_pred HHHhCCC---CcceEEEECchhc
Confidence 9999995 4667788888654
No 8
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.93 E-value=1.4e-24 Score=218.59 Aligned_cols=119 Identities=18% Similarity=0.097 Sum_probs=93.9
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHH
Q psy3848 19 EDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLA 98 (552)
Q Consensus 19 ~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La 98 (552)
.||..+.++....+ ..+++|||+||+++++..|.. ++..|+
T Consensus 9 ~~~~~~~~~~~~~~------~~~~plvllHG~~~~~~~w~~---------------------------------~~~~L~ 49 (276)
T TIGR02240 9 LDGQSIRTAVRPGK------EGLTPLLIFNGIGANLELVFP---------------------------------FIEALD 49 (276)
T ss_pred cCCcEEEEEEecCC------CCCCcEEEEeCCCcchHHHHH---------------------------------HHHHhc
Confidence 46777767665322 235799999999999999988 788887
Q ss_pred hCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCc
Q psy3848 99 DKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPE 178 (552)
Q Consensus 99 ~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe 178 (552)
+ +|+|+++|+||||.|+.... .+++++++ +.+..+++.++++++++|||||||.+++.+|.++|+
T Consensus 50 ~-~~~vi~~Dl~G~G~S~~~~~---------~~~~~~~~-----~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~ 114 (276)
T TIGR02240 50 P-DLEVIAFDVPGVGGSSTPRH---------PYRFPGLA-----KLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPE 114 (276)
T ss_pred c-CceEEEECCCCCCCCCCCCC---------cCcHHHHH-----HHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHH
Confidence 7 69999999999999974221 46778777 444555567788899999999999999999999995
Q ss_pred chhchheeeecccccc
Q psy3848 179 YNEKLLGAISLAPVAY 194 (552)
Q Consensus 179 ~~~~l~~~I~laP~~~ 194 (552)
++.++|+++|...
T Consensus 115 ---~v~~lvl~~~~~~ 127 (276)
T TIGR02240 115 ---RCKKLILAATAAG 127 (276)
T ss_pred ---HhhheEEeccCCc
Confidence 5777788887664
No 9
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=1.1e-24 Score=221.17 Aligned_cols=122 Identities=19% Similarity=0.268 Sum_probs=95.2
Q ss_pred ceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCc
Q psy3848 11 AESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPD 90 (552)
Q Consensus 11 ~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 90 (552)
.+...++ .||..+.+... |++++|||+||++++...|..
T Consensus 7 ~~~~~~~-~~g~~i~y~~~---------G~g~~vvllHG~~~~~~~w~~------------------------------- 45 (295)
T PRK03592 7 GEMRRVE-VLGSRMAYIET---------GEGDPIVFLHGNPTSSYLWRN------------------------------- 45 (295)
T ss_pred CcceEEE-ECCEEEEEEEe---------CCCCEEEEECCCCCCHHHHHH-------------------------------
Confidence 3444443 47776666544 346899999999999999988
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHH
Q psy3848 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFY 170 (552)
Q Consensus 91 ~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial 170 (552)
++..|++++ +|+++|+||||.|+.... .++++++++ |+ ..++++++++++++|||||||.+++
T Consensus 46 --~~~~L~~~~-~via~D~~G~G~S~~~~~---------~~~~~~~a~-dl----~~ll~~l~~~~~~lvGhS~Gg~ia~ 108 (295)
T PRK03592 46 --IIPHLAGLG-RCLAPDLIGMGASDKPDI---------DYTFADHAR-YL----DAWFDALGLDDVVLVGHDWGSALGF 108 (295)
T ss_pred --HHHHHhhCC-EEEEEcCCCCCCCCCCCC---------CCCHHHHHH-HH----HHHHHHhCCCCeEEEEECHHHHHHH
Confidence 888899875 999999999999974321 467888884 44 4445567889999999999999999
Q ss_pred HHHHcCCcchhchheeeeccccc
Q psy3848 171 VLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 171 ~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
.+|.++|+ ++.++|+++|..
T Consensus 109 ~~a~~~p~---~v~~lil~~~~~ 128 (295)
T PRK03592 109 DWAARHPD---RVRGIAFMEAIV 128 (295)
T ss_pred HHHHhChh---heeEEEEECCCC
Confidence 99999995 466668888743
No 10
>KOG1455|consensus
Probab=99.93 E-value=9.4e-25 Score=221.15 Aligned_cols=284 Identities=18% Similarity=0.180 Sum_probs=191.9
Q ss_pred CceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCC
Q psy3848 10 PAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGP 89 (552)
Q Consensus 10 p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 89 (552)
-...-.+.+.+|..|....|.+... ...+..|+++||+++.+.....
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~---~~pr~lv~~~HG~g~~~s~~~~------------------------------ 72 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSG---TEPRGLVFLCHGYGEHSSWRYQ------------------------------ 72 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCC---CCCceEEEEEcCCcccchhhHH------------------------------
Confidence 3455678899999998888765321 1356789999999987743332
Q ss_pred cHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHH--cCCCcEEEEEechhHH
Q psy3848 90 DTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK--TDHTQMIYIGHSMGTT 167 (552)
Q Consensus 90 ~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~--~g~~ki~lVGHSmGG~ 167 (552)
+++..|+..||.|+++|++|||.|++-..+-| +++..+. |+.+.++.++.. ....+.++.||||||.
T Consensus 73 --~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~--------~~d~~v~-D~~~~~~~i~~~~e~~~lp~FL~GeSMGGA 141 (313)
T KOG1455|consen 73 --STAKRLAKSGFAVYAIDYEGHGRSDGLHAYVP--------SFDLVVD-DVISFFDSIKEREENKGLPRFLFGESMGGA 141 (313)
T ss_pred --HHHHHHHhCCCeEEEeeccCCCcCCCCcccCC--------cHHHHHH-HHHHHHHHHhhccccCCCCeeeeecCcchH
Confidence 48999999999999999999999996444333 3677776 888888887654 3345799999999999
Q ss_pred HHHHHHHcCCcchhchheeeeccccccccCCCchhhhhhhhhhhHHHHHHHhcCccccchhhhHHHHHHHHHhhhhhhhh
Q psy3848 168 MFYVLTSQRPEYNEKLLGAISLAPVAYLSRTRSPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMK 247 (552)
Q Consensus 168 ial~~a~~~Pe~~~~l~~~I~laP~~~~~~~~~pl~~l~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 247 (552)
+++.++.++| ....|+|++||++.......|-..+..++ ..+...+.+....|.........+....
T Consensus 142 V~Ll~~~k~p---~~w~G~ilvaPmc~i~~~~kp~p~v~~~l---~~l~~liP~wk~vp~~d~~~~~~kdp~~------- 208 (313)
T KOG1455|consen 142 VALLIALKDP---NFWDGAILVAPMCKISEDTKPHPPVISIL---TLLSKLIPTWKIVPTKDIIDVAFKDPEK------- 208 (313)
T ss_pred HHHHHHhhCC---cccccceeeecccccCCccCCCcHHHHHH---HHHHHhCCceeecCCccccccccCCHHH-------
Confidence 9999999989 56888899999888766554432222211 2233444444444443322211111000
Q ss_pred hhHHHHHHHhCCCCccccccchHHHhccCCCCcchhhHHHHHhhhccccccccccCcccccccccCCCCCCccccccccc
Q psy3848 248 RCEDFLFILCGHDPYQFKMSLLPVILGHTPAGGSTRTLVHFAQFIDSGKFRQFDYGKDENLHIYNSTFPPKYDLKFISTK 327 (552)
Q Consensus 248 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~q~~~~~~f~~~d~~~~~n~~~y~~~~p~~~~~~~i~~~ 327 (552)
......++.. .......+++..+++...
T Consensus 209 ------r~~~~~npl~------------y~g~pRl~T~~ElLr~~~---------------------------------- 236 (313)
T KOG1455|consen 209 ------RKILRSDPLC------------YTGKPRLKTAYELLRVTA---------------------------------- 236 (313)
T ss_pred ------HHHhhcCCce------------ecCCccHHHHHHHHHHHH----------------------------------
Confidence 0000111110 001112333333332211
Q ss_pred eeeeccccccchhhhHHHhhcccchhhhhhccccccccccccccCCCCCCCCCCCccccEEEEEeCCCCCCCHHHHHHHH
Q psy3848 328 VAFFYADNDLLTNEQVTIRLGLVDLFRKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELY 407 (552)
Q Consensus 328 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PvLii~G~~D~i~p~~~~~~l~ 407 (552)
|+ -+ .+.++++|++++||++|.+++++.++.++
T Consensus 237 --------~l------------e~---------------------------~l~~vtvPflilHG~dD~VTDp~~Sk~Ly 269 (313)
T KOG1455|consen 237 --------DL------------EK---------------------------NLNEVTVPFLILHGTDDKVTDPKVSKELY 269 (313)
T ss_pred --------HH------------HH---------------------------hcccccccEEEEecCCCcccCcHHHHHHH
Confidence 00 00 67899999999999999999999999999
Q ss_pred HhCCCCccceEEEeCCCCccccc-ccccchHHHHHHHHHHHHhh
Q psy3848 408 TLLPNPVGLFKVNFTYFNHLDFL-WAKDVKALVYNDLLLVLKTF 450 (552)
Q Consensus 408 ~~lp~~~~~~~v~~~~~gH~~~l-~~~~~~~~V~~~il~fL~~~ 450 (552)
+..++.+ +.+..+|+.-|.-+. +.+++.+.|+.+|++||+++
T Consensus 270 e~A~S~D-KTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 270 EKASSSD-KTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HhccCCC-CceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9998865 467789999997553 56789999999999999875
No 11
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=5.3e-24 Score=220.29 Aligned_cols=144 Identities=17% Similarity=0.246 Sum_probs=108.1
Q ss_pred cccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCcc
Q psy3848 5 RRHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADW 84 (552)
Q Consensus 5 ~~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (552)
+..|.+.++..+.+.||..|.+..+..... ...+++|||+||++++. .|..
T Consensus 26 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~---~~~~~~VvllHG~~~~~-~~~~------------------------- 76 (330)
T PLN02298 26 ALKGIKGSKSFFTSPRGLSLFTRSWLPSSS---SPPRALIFMVHGYGNDI-SWTF------------------------- 76 (330)
T ss_pred hccCCccccceEEcCCCCEEEEEEEecCCC---CCCceEEEEEcCCCCCc-ceeh-------------------------
Confidence 456677777789999999998876643211 02467899999997664 3433
Q ss_pred ccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHc--CCCcEEEEEe
Q psy3848 85 VVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT--DHTQMIYIGH 162 (552)
Q Consensus 85 ~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~--g~~ki~lVGH 162 (552)
+.++..|+++||+|+++|+||||.|.+... . ..++++++. |+.++++++.... ...+++++||
T Consensus 77 ------~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-----~---~~~~~~~~~-D~~~~i~~l~~~~~~~~~~i~l~Gh 141 (330)
T PLN02298 77 ------QSTAIFLAQMGFACFALDLEGHGRSEGLRA-----Y---VPNVDLVVE-DCLSFFNSVKQREEFQGLPRFLYGE 141 (330)
T ss_pred ------hHHHHHHHhCCCEEEEecCCCCCCCCCccc-----c---CCCHHHHHH-HHHHHHHHHHhcccCCCCCEEEEEe
Confidence 237888999999999999999999974221 0 245777776 8999999887542 2347999999
Q ss_pred chhHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 163 SMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 163 SmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
||||.+++.++.++|+ .+.++|+++|....
T Consensus 142 SmGG~ia~~~a~~~p~---~v~~lvl~~~~~~~ 171 (330)
T PLN02298 142 SMGGAICLLIHLANPE---GFDGAVLVAPMCKI 171 (330)
T ss_pred cchhHHHHHHHhcCcc---cceeEEEecccccC
Confidence 9999999999999995 57777888886543
No 12
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.91 E-value=4.2e-23 Score=206.53 Aligned_cols=64 Identities=14% Similarity=0.104 Sum_probs=58.1
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHH
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 448 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~ 448 (552)
.+++|++|+|+++|++|.+++++.++.+++.+|+.. ++.++++||+.+. +.++.+.+.|.+||+
T Consensus 218 ~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~---~~~i~~agH~~~~---e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 218 RLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQ---LHVFSRCGHWAQW---EHADAFNRLVIDFLR 281 (282)
T ss_pred HHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCE---EEEeCCCCcCCcc---cCHHHHHHHHHHHhh
Confidence 678899999999999999999999999999999877 7889999999764 788899999999996
No 13
>KOG4178|consensus
Probab=99.91 E-value=8.9e-24 Score=216.64 Aligned_cols=123 Identities=24% Similarity=0.350 Sum_probs=101.2
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcH
Q psy3848 12 ESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDT 91 (552)
Q Consensus 12 e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 91 (552)
-++...|-+| +.+|....+. +.+|.|+|+||++.+..+|+.
T Consensus 22 ~~hk~~~~~g--I~~h~~e~g~-----~~gP~illlHGfPe~wyswr~-------------------------------- 62 (322)
T KOG4178|consen 22 ISHKFVTYKG--IRLHYVEGGP-----GDGPIVLLLHGFPESWYSWRH-------------------------------- 62 (322)
T ss_pred cceeeEEEcc--EEEEEEeecC-----CCCCEEEEEccCCccchhhhh--------------------------------
Confidence 3466667777 7888876654 689999999999999999998
Q ss_pred HHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHH
Q psy3848 92 ALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYV 171 (552)
Q Consensus 92 ~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~ 171 (552)
....|+++||+|+|+|+||+|.|+.+... . .||+..++ ..+..++++++.++++++||+||+++|+.
T Consensus 63 -q~~~la~~~~rviA~DlrGyG~Sd~P~~~----~---~Yt~~~l~-----~di~~lld~Lg~~k~~lvgHDwGaivaw~ 129 (322)
T KOG4178|consen 63 -QIPGLASRGYRVIAPDLRGYGFSDAPPHI----S---EYTIDELV-----GDIVALLDHLGLKKAFLVGHDWGAIVAWR 129 (322)
T ss_pred -hhhhhhhcceEEEecCCCCCCCCCCCCCc----c---eeeHHHHH-----HHHHHHHHHhccceeEEEeccchhHHHHH
Confidence 56669999999999999999999965421 2 68999888 45555666889999999999999999999
Q ss_pred HHHcCCcchhchhee
Q psy3848 172 LTSQRPEYNEKLLGA 186 (552)
Q Consensus 172 ~a~~~Pe~~~~l~~~ 186 (552)
+|..+|+++++++.+
T Consensus 130 la~~~Perv~~lv~~ 144 (322)
T KOG4178|consen 130 LALFYPERVDGLVTL 144 (322)
T ss_pred HHHhChhhcceEEEe
Confidence 999999776665443
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.91 E-value=1.1e-22 Score=201.31 Aligned_cols=118 Identities=18% Similarity=0.263 Sum_probs=90.6
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHH
Q psy3848 18 TEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLL 97 (552)
Q Consensus 18 t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~L 97 (552)
+-+|..+.+..... .++++|||+||++++...|.. ++..|
T Consensus 12 ~~~~~~~~~~~~g~-------~~~~~vv~~hG~~~~~~~~~~---------------------------------~~~~l 51 (278)
T TIGR03056 12 TVGPFHWHVQDMGP-------TAGPLLLLLHGTGASTHSWRD---------------------------------LMPPL 51 (278)
T ss_pred eECCEEEEEEecCC-------CCCCeEEEEcCCCCCHHHHHH---------------------------------HHHHH
Confidence 44776666554321 346899999999999999988 78888
Q ss_pred HhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCC
Q psy3848 98 ADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRP 177 (552)
Q Consensus 98 a~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~P 177 (552)
++ +|+|+++|+||||.|+... .. .+++++++. .+..+++++++++++++||||||.+++.+|.++|
T Consensus 52 ~~-~~~vi~~D~~G~G~S~~~~-----~~---~~~~~~~~~-----~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 117 (278)
T TIGR03056 52 AR-SFRVVAPDLPGHGFTRAPF-----RF---RFTLPSMAE-----DLSALCAAEGLSPDGVIGHSAGAAIALRLALDGP 117 (278)
T ss_pred hh-CcEEEeecCCCCCCCCCcc-----cc---CCCHHHHHH-----HHHHHHHHcCCCCceEEEECccHHHHHHHHHhCC
Confidence 77 6999999999999997422 11 467787774 4445556778889999999999999999999999
Q ss_pred cchhchheeeecccc
Q psy3848 178 EYNEKLLGAISLAPV 192 (552)
Q Consensus 178 e~~~~l~~~I~laP~ 192 (552)
++ +.+++++++.
T Consensus 118 ~~---v~~~v~~~~~ 129 (278)
T TIGR03056 118 VT---PRMVVGINAA 129 (278)
T ss_pred cc---cceEEEEcCc
Confidence 54 5556666654
No 15
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=1.1e-22 Score=214.32 Aligned_cols=104 Identities=19% Similarity=0.229 Sum_probs=82.9
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCC
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHI 119 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~ 119 (552)
.+++|||+||++++...|.. ++..|++ +|+|+++|+||||.|+...
T Consensus 87 ~gp~lvllHG~~~~~~~w~~---------------------------------~~~~L~~-~~~via~Dl~G~G~S~~~~ 132 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRR---------------------------------NIGVLAK-NYTVYAIDLLGFGASDKPP 132 (360)
T ss_pred CCCeEEEECCCCCCHHHHHH---------------------------------HHHHHhc-CCEEEEECCCCCCCCCCCC
Confidence 45899999999999999998 7778887 7999999999999997421
Q ss_pred CCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHc-CCcchhchheeeeccccc
Q psy3848 120 SYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQ-RPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 120 ~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~-~Pe~~~~l~~~I~laP~~ 193 (552)
+. .+++++++. |+ ..++++++.+++++|||||||.+++.++++ +|+ ++.++|+++|..
T Consensus 133 -----~~---~~~~~~~a~-~l----~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~---rV~~LVLi~~~~ 191 (360)
T PLN02679 133 -----GF---SYTMETWAE-LI----LDFLEEVVQKPTVLIGNSVGSLACVIAASESTRD---LVRGLVLLNCAG 191 (360)
T ss_pred -----Cc---cccHHHHHH-HH----HHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChh---hcCEEEEECCcc
Confidence 11 467887774 44 444456788899999999999999998874 685 466667777754
No 16
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.91 E-value=2.2e-22 Score=197.50 Aligned_cols=124 Identities=23% Similarity=0.243 Sum_probs=88.8
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHH
Q psy3848 18 TEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLL 97 (552)
Q Consensus 18 t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~L 97 (552)
+.||..+.+...... +.+++|||+||+++++..|.. .+...|
T Consensus 8 ~~~~~~~~~~~~~~~------~~~~~vl~~hG~~g~~~~~~~--------------------------------~~~~~l 49 (288)
T TIGR01250 8 TVDGGYHLFTKTGGE------GEKIKLLLLHGGPGMSHEYLE--------------------------------NLRELL 49 (288)
T ss_pred cCCCCeEEEEeccCC------CCCCeEEEEcCCCCccHHHHH--------------------------------HHHHHH
Confidence 444555555544322 347899999998877765544 266667
Q ss_pred HhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCC
Q psy3848 98 ADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRP 177 (552)
Q Consensus 98 a~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~P 177 (552)
.++||+|+++|+||||.|..... ... .+++++++ +.+..++++++.++++++||||||.+++.+|.++|
T Consensus 50 ~~~g~~vi~~d~~G~G~s~~~~~---~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p 118 (288)
T TIGR01250 50 KEEGREVIMYDQLGCGYSDQPDD---SDE---LWTIDYFV-----DELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYG 118 (288)
T ss_pred HhcCCEEEEEcCCCCCCCCCCCc---ccc---cccHHHHH-----HHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCc
Confidence 77799999999999999974321 110 25677666 45566677888889999999999999999999999
Q ss_pred cchhchheeeeccccc
Q psy3848 178 EYNEKLLGAISLAPVA 193 (552)
Q Consensus 178 e~~~~l~~~I~laP~~ 193 (552)
++ +.++|++++..
T Consensus 119 ~~---v~~lvl~~~~~ 131 (288)
T TIGR01250 119 QH---LKGLIISSMLD 131 (288)
T ss_pred cc---cceeeEecccc
Confidence 65 55556666544
No 17
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.91 E-value=1.4e-22 Score=212.45 Aligned_cols=115 Identities=14% Similarity=0.172 Sum_probs=96.3
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCC
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHI 119 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~ 119 (552)
.++|||++||+..+...+.. .+.+++++.|+++||+||++|+||+|.|..
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~----------------------------~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~-- 110 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDL----------------------------QEDRSLVRGLLERGQDVYLIDWGYPDRADR-- 110 (350)
T ss_pred CCCcEEEeccccccceeccC----------------------------CCCchHHHHHHHCCCeEEEEeCCCCCHHHh--
Confidence 46789999999766665543 456779999999999999999999987753
Q ss_pred CCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccccccC
Q psy3848 120 SYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSR 197 (552)
Q Consensus 120 ~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~~~ 197 (552)
.+++++++..|+.++++++++.++.++++++||||||++++.+++.+|+ ++.++|+++|......
T Consensus 111 ----------~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~---~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 111 ----------YLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPD---KIKNLVTMVTPVDFET 175 (350)
T ss_pred ----------cCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCch---heeeEEEeccccccCC
Confidence 3567888876799999999999999999999999999999999999984 5777888888776543
No 18
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.90 E-value=1.7e-22 Score=205.95 Aligned_cols=128 Identities=16% Similarity=0.153 Sum_probs=97.9
Q ss_pred ccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccc
Q psy3848 6 RHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWV 85 (552)
Q Consensus 6 ~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (552)
.+.||.++..+.+. |..+. +... |++++|||+||+++++..|..
T Consensus 9 ~~~~~~~~~~~~~~-~~~i~--y~~~-------G~~~~iv~lHG~~~~~~~~~~-------------------------- 52 (286)
T PRK03204 9 PQLYPFESRWFDSS-RGRIH--YIDE-------GTGPPILLCHGNPTWSFLYRD-------------------------- 52 (286)
T ss_pred CccccccceEEEcC-CcEEE--EEEC-------CCCCEEEEECCCCccHHHHHH--------------------------
Confidence 45788888888875 54443 3332 346899999999988888887
Q ss_pred cCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechh
Q psy3848 86 VAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMG 165 (552)
Q Consensus 86 ~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmG 165 (552)
++..|.+ +|+|+++|+||||.|+... +. ++++++++ +.+..++++++.++++++|||||
T Consensus 53 -------~~~~l~~-~~~vi~~D~~G~G~S~~~~-----~~---~~~~~~~~-----~~~~~~~~~~~~~~~~lvG~S~G 111 (286)
T PRK03204 53 -------IIVALRD-RFRCVAPDYLGFGLSERPS-----GF---GYQIDEHA-----RVIGEFVDHLGLDRYLSMGQDWG 111 (286)
T ss_pred -------HHHHHhC-CcEEEEECCCCCCCCCCCC-----cc---ccCHHHHH-----HHHHHHHHHhCCCCEEEEEECcc
Confidence 7778876 6999999999999997422 11 35566666 66667777889899999999999
Q ss_pred HHHHHHHHHcCCcchhchheeeeccccc
Q psy3848 166 TTMFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 166 G~ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
|.+++.++..+|++ +.++|++++..
T Consensus 112 g~va~~~a~~~p~~---v~~lvl~~~~~ 136 (286)
T PRK03204 112 GPISMAVAVERADR---VRGVVLGNTWF 136 (286)
T ss_pred HHHHHHHHHhChhh---eeEEEEECccc
Confidence 99999999999965 55556666543
No 19
>PLN02965 Probable pheophorbidase
Probab=99.90 E-value=1e-22 Score=202.99 Aligned_cols=101 Identities=22% Similarity=0.211 Sum_probs=81.1
Q ss_pred EEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCC
Q psy3848 43 VVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYS 122 (552)
Q Consensus 43 ~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~s 122 (552)
.|||+||++++...|.. ++..|+++||+|+++|+||||.|.....
T Consensus 5 ~vvllHG~~~~~~~w~~---------------------------------~~~~L~~~~~~via~Dl~G~G~S~~~~~-- 49 (255)
T PLN02965 5 HFVFVHGASHGAWCWYK---------------------------------LATLLDAAGFKSTCVDLTGAGISLTDSN-- 49 (255)
T ss_pred EEEEECCCCCCcCcHHH---------------------------------HHHHHhhCCceEEEecCCcCCCCCCCcc--
Confidence 59999999999999998 8888988899999999999999974221
Q ss_pred CCcccccccChhhhhhccHHHHHHHHHHHcCC-CcEEEEEechhHHHHHHHHHcCCcchhchheeeecccc
Q psy3848 123 PMDLAFWDFSFHEMGYFDLPAEIDFILNKTDH-TQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPV 192 (552)
Q Consensus 123 p~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~-~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~ 192 (552)
. .+++++++. |+.+ +++.++. +++++|||||||.+++.++.++|++ |.++|++++.
T Consensus 50 ---~---~~~~~~~a~-dl~~----~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~---v~~lvl~~~~ 106 (255)
T PLN02965 50 ---T---VSSSDQYNR-PLFA----LLSDLPPDHKVILVGHSIGGGSVTEALCKFTDK---ISMAIYVAAA 106 (255)
T ss_pred ---c---cCCHHHHHH-HHHH----HHHhcCCCCCEEEEecCcchHHHHHHHHhCchh---eeEEEEEccc
Confidence 1 467787774 4444 4446776 4999999999999999999999965 5566777764
No 20
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.90 E-value=6.9e-23 Score=211.60 Aligned_cols=137 Identities=26% Similarity=0.279 Sum_probs=112.7
Q ss_pred ceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCc
Q psy3848 11 AESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPD 90 (552)
Q Consensus 11 ~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 90 (552)
..+..+.+.||..+.++.+.... ..+.+||++||+..++..|..
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~-----~~~g~Vvl~HG~~Eh~~ry~~------------------------------- 52 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPE-----PPKGVVVLVHGLGEHSGRYEE------------------------------- 52 (298)
T ss_pred cccceeecCCCceEEEEeecCCC-----CCCcEEEEecCchHHHHHHHH-------------------------------
Confidence 35567889999999999987653 233799999999999999998
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCC-CCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHH
Q psy3848 91 TALAYLLADKGYDVWLGNARGNTYSRS-HISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMF 169 (552)
Q Consensus 91 ~~la~~La~~Gy~Via~D~RG~G~S~~-~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ia 169 (552)
+++.|+.+||.|+++|+||||.|.. ... . --+|+++.. |+.+.++.+.+.....+++++||||||.++
T Consensus 53 --la~~l~~~G~~V~~~D~RGhG~S~r~~rg---~-----~~~f~~~~~-dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia 121 (298)
T COG2267 53 --LADDLAARGFDVYALDLRGHGRSPRGQRG---H-----VDSFADYVD-DLDAFVETIAEPDPGLPVFLLGHSMGGLIA 121 (298)
T ss_pred --HHHHHHhCCCEEEEecCCCCCCCCCCCcC---C-----chhHHHHHH-HHHHHHHHHhccCCCCCeEEEEeCcHHHHH
Confidence 9999999999999999999999972 111 1 123677776 888888877765455789999999999999
Q ss_pred HHHHHcCCcchhchheeeeccccccccC
Q psy3848 170 YVLTSQRPEYNEKLLGAISLAPVAYLSR 197 (552)
Q Consensus 170 l~~a~~~Pe~~~~l~~~I~laP~~~~~~ 197 (552)
+.++.+++ .++.++|+.+|......
T Consensus 122 ~~~~~~~~---~~i~~~vLssP~~~l~~ 146 (298)
T COG2267 122 LLYLARYP---PRIDGLVLSSPALGLGG 146 (298)
T ss_pred HHHHHhCC---ccccEEEEECccccCCh
Confidence 99999998 77999999999887653
No 21
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.90 E-value=2.6e-22 Score=197.58 Aligned_cols=100 Identities=26% Similarity=0.371 Sum_probs=81.7
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
+++++|||+||++++...|.. ++..|++ +|+|+++|+||||.|...
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~---------------------------------~~~~l~~-~~~vi~~D~~G~G~s~~~ 59 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGV---------------------------------LARDLVN-DHDIIQVDMRNHGLSPRD 59 (255)
T ss_pred CCCCCEEEECCCCCchhHHHH---------------------------------HHHHHhh-CCeEEEECCCCCCCCCCC
Confidence 578999999999999999988 7888877 799999999999999742
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLA 190 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~la 190 (552)
. .+++++++. |+.+ +++.++.++++++||||||.+++.+|.++|++ +.++|+++
T Consensus 60 ~----------~~~~~~~~~-d~~~----~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~---v~~lvli~ 113 (255)
T PRK10673 60 P----------VMNYPAMAQ-DLLD----TLDALQIEKATFIGHSMGGKAVMALTALAPDR---IDKLVAID 113 (255)
T ss_pred C----------CCCHHHHHH-HHHH----HHHHcCCCceEEEEECHHHHHHHHHHHhCHhh---cceEEEEe
Confidence 2 467888875 5544 44467888999999999999999999999965 55555554
No 22
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.90 E-value=2.8e-22 Score=214.56 Aligned_cols=138 Identities=17% Similarity=0.176 Sum_probs=107.4
Q ss_pred ceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCc
Q psy3848 11 AESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPD 90 (552)
Q Consensus 11 ~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 90 (552)
.....++..||..+.+..+.+... ..+++||++||++++...|..
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~----~~~~~Vl~lHG~~~~~~~~~~------------------------------- 154 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAG----EMRGILIIIHGLNEHSGRYLH------------------------------- 154 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCC----CCceEEEEECCchHHHHHHHH-------------------------------
Confidence 455567778888777766654311 346799999999999888877
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHH
Q psy3848 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFY 170 (552)
Q Consensus 91 ~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial 170 (552)
++..|+++||+|+++|+||||.|++... ...+++.+.. |+.+.++.+.......+++++||||||.+++
T Consensus 155 --~a~~L~~~Gy~V~~~D~rGhG~S~~~~~--------~~~~~~~~~~-Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial 223 (395)
T PLN02652 155 --FAKQLTSCGFGVYAMDWIGHGGSDGLHG--------YVPSLDYVVE-DTEAFLEKIRSENPGVPCFLFGHSTGGAVVL 223 (395)
T ss_pred --HHHHHHHCCCEEEEeCCCCCCCCCCCCC--------CCcCHHHHHH-HHHHHHHHHHHhCCCCCEEEEEECHHHHHHH
Confidence 8999999999999999999999975321 0235666665 8889999888766656899999999999999
Q ss_pred HHHHcCCcchhchheeeeccccccc
Q psy3848 171 VLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 171 ~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
.++ .+|+..+++.++|+.+|....
T Consensus 224 ~~a-~~p~~~~~v~glVL~sP~l~~ 247 (395)
T PLN02652 224 KAA-SYPSIEDKLEGIVLTSPALRV 247 (395)
T ss_pred HHH-hccCcccccceEEEECccccc
Confidence 765 567655678899999987643
No 23
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.90 E-value=2.5e-22 Score=194.66 Aligned_cols=105 Identities=23% Similarity=0.371 Sum_probs=82.8
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
.++|+|||+||+++++..|.. ++..|.+ ||+|+++|+||||.|...
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~---------------------------------~~~~l~~-~~~vi~~D~~G~G~S~~~ 56 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAP---------------------------------QLDVLTQ-RFHVVTYDHRGTGRSPGE 56 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHH---------------------------------HHHHHHh-ccEEEEEcCCCCCCCCCC
Confidence 357899999999999999987 7777776 799999999999999742
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
. .. .+++++++. |+ ..+++..+..+++++||||||.+++.+++++|+ ++.++|++++..
T Consensus 57 ~-----~~---~~~~~~~~~-~~----~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~---~v~~~i~~~~~~ 115 (257)
T TIGR03611 57 L-----PP---GYSIAHMAD-DV----LQLLDALNIERFHFVGHALGGLIGLQLALRYPE---RLLSLVLINAWS 115 (257)
T ss_pred C-----cc---cCCHHHHHH-HH----HHHHHHhCCCcEEEEEechhHHHHHHHHHHChH---HhHHheeecCCC
Confidence 1 11 467777774 44 444456778899999999999999999999995 466667776644
No 24
>PLN02578 hydrolase
Probab=99.90 E-value=4.2e-22 Score=209.35 Aligned_cols=105 Identities=18% Similarity=0.232 Sum_probs=83.1
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
|++++|||+||+++++..|.. ++..|++ +|+|+++|+||||.|++.
T Consensus 84 g~g~~vvliHG~~~~~~~w~~---------------------------------~~~~l~~-~~~v~~~D~~G~G~S~~~ 129 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFHWRY---------------------------------NIPELAK-KYKVYALDLLGFGWSDKA 129 (354)
T ss_pred CCCCeEEEECCCCCCHHHHHH---------------------------------HHHHHhc-CCEEEEECCCCCCCCCCc
Confidence 356899999999999999988 6777877 699999999999999853
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
.. .|+..+++. |+.+.++ ..+.++++++||||||.+++.+|+++|++ +.+++++++...
T Consensus 130 ~~---------~~~~~~~a~-~l~~~i~----~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~---v~~lvLv~~~~~ 188 (354)
T PLN02578 130 LI---------EYDAMVWRD-QVADFVK----EVVKEPAVLVGNSLGGFTALSTAVGYPEL---VAGVALLNSAGQ 188 (354)
T ss_pred cc---------ccCHHHHHH-HHHHHHH----HhccCCeEEEEECHHHHHHHHHHHhChHh---cceEEEECCCcc
Confidence 21 467777774 5555444 44567899999999999999999999954 666677776543
No 25
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.90 E-value=3.2e-22 Score=198.61 Aligned_cols=64 Identities=22% Similarity=0.180 Sum_probs=57.2
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHH
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 448 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~ 448 (552)
.+.+|++|||+++|++|.++|.+.++.+.+.+|++. .++++++||+.++ +.++.|...|.+|-+
T Consensus 191 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~---~~~i~~~gH~~~~---e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 191 PLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSE---SYIFAKAAHAPFI---SHPAEFCHLLVALKQ 254 (256)
T ss_pred HHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCe---EEEeCCCCCCccc---cCHHHHHHHHHHHhc
Confidence 678899999999999999999999999999999987 7889999998775 788889998888743
No 26
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.90 E-value=8.7e-22 Score=215.01 Aligned_cols=129 Identities=22% Similarity=0.238 Sum_probs=93.8
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHH
Q psy3848 15 IVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALA 94 (552)
Q Consensus 15 ~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la 94 (552)
...+..|..|.++...+.. ...+++|||+||++++...|.. .+.
T Consensus 179 ~~~~~~~~~l~~~~~gp~~----~~~k~~VVLlHG~~~s~~~W~~--------------------------------~~~ 222 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKD----NKAKEDVLFIHGFISSSAFWTE--------------------------------TLF 222 (481)
T ss_pred eeEeeCCeEEEEEEecCCC----CCCCCeEEEECCCCccHHHHHH--------------------------------HHH
Confidence 3344455566555544321 1236899999999999999975 133
Q ss_pred HHHH---hCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHH-HHHHHHcCCCcEEEEEechhHHHHH
Q psy3848 95 YLLA---DKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEI-DFILNKTDHTQMIYIGHSMGTTMFY 170 (552)
Q Consensus 95 ~~La---~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I-~~I~~~~g~~ki~lVGHSmGG~ial 170 (552)
..|+ +++|+|+++|+||||.|+... +. .|++++++ +.+ ..+++.++.++++++||||||.+++
T Consensus 223 ~~L~~~~~~~yrVia~Dl~G~G~S~~p~-----~~---~ytl~~~a-----~~l~~~ll~~lg~~k~~LVGhSmGG~iAl 289 (481)
T PLN03087 223 PNFSDAAKSTYRLFAVDLLGFGRSPKPA-----DS---LYTLREHL-----EMIERSVLERYKVKSFHIVAHSLGCILAL 289 (481)
T ss_pred HHHHHHhhCCCEEEEECCCCCCCCcCCC-----CC---cCCHHHHH-----HHHHHHHHHHcCCCCEEEEEECHHHHHHH
Confidence 4444 368999999999999997421 12 46778777 344 3567788999999999999999999
Q ss_pred HHHHcCCcchhchheeeeccccccc
Q psy3848 171 VLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 171 ~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
.+|.++|+ ++.++|+++|..+.
T Consensus 290 ~~A~~~Pe---~V~~LVLi~~~~~~ 311 (481)
T PLN03087 290 ALAVKHPG---AVKSLTLLAPPYYP 311 (481)
T ss_pred HHHHhChH---hccEEEEECCCccc
Confidence 99999995 56666888876543
No 27
>PRK06489 hypothetical protein; Provisional
Probab=99.89 E-value=1.2e-21 Score=206.23 Aligned_cols=67 Identities=15% Similarity=0.008 Sum_probs=58.2
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHH--HHHHHhCCCCccceEEEeCCC----CcccccccccchHHHHHHHHHHHHhhcc
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDV--KELYTLLPNPVGLFKVNFTYF----NHLDFLWAKDVKALVYNDLLLVLKTFSK 452 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~--~~l~~~lp~~~~~~~v~~~~~----gH~~~l~~~~~~~~V~~~il~fL~~~~~ 452 (552)
.+++|++|||+++|++|.++|++.+ +.+.+.+|++. +++++++ ||..+ +.++.+.+.|.+||++..+
T Consensus 287 ~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~---l~~i~~a~~~~GH~~~----e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 287 DLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGR---LVLIPASPETRGHGTT----GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred HHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCe---EEEECCCCCCCCcccc----cCHHHHHHHHHHHHHhccc
Confidence 6889999999999999999999876 78999999987 7889985 99753 4889999999999987654
No 28
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.89 E-value=3.7e-22 Score=191.16 Aligned_cols=103 Identities=16% Similarity=0.232 Sum_probs=81.2
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCC
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHI 119 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~ 119 (552)
.+|+|||+||++++...|.. +++.|++ ||+|+++|+||+|.|....
T Consensus 12 ~~~~li~~hg~~~~~~~~~~---------------------------------~~~~l~~-~~~v~~~d~~G~G~s~~~~ 57 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDP---------------------------------VLPALTP-DFRVLRYDKRGHGLSDAPE 57 (251)
T ss_pred CCCeEEEEcCcccchhhHHH---------------------------------HHHHhhc-ccEEEEecCCCCCCCCCCC
Confidence 56899999999999999988 7888875 8999999999999986321
Q ss_pred CCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccc
Q psy3848 120 SYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 120 ~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
. .+++.+++ +.+..+++.++.++++++||||||.+++.+|.++|++ +.++|++++..
T Consensus 58 ------~---~~~~~~~~-----~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~---v~~li~~~~~~ 114 (251)
T TIGR02427 58 ------G---PYSIEDLA-----DDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDR---VRALVLSNTAA 114 (251)
T ss_pred ------C---CCCHHHHH-----HHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHH---hHHHhhccCcc
Confidence 1 45677767 4445555567778999999999999999999999865 44446666543
No 29
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.89 E-value=5.9e-22 Score=189.48 Aligned_cols=63 Identities=24% Similarity=0.149 Sum_probs=56.4
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHH
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVL 447 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL 447 (552)
.+.+|++|+++++|++|.++|++.++.+.+.+|+.. .+.++++||+.++ +.++++.+.|.+|+
T Consensus 183 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~---e~p~~~~~~i~~fi 245 (245)
T TIGR01738 183 PLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSE---LYIFAKAAHAPFL---SHAEAFCALLVAFK 245 (245)
T ss_pred HHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCe---EEEeCCCCCCccc---cCHHHHHHHHHhhC
Confidence 567899999999999999999999999999999876 7789999999776 67889999999885
No 30
>PLN02511 hydrolase
Probab=99.89 E-value=5.1e-22 Score=211.89 Aligned_cols=141 Identities=22% Similarity=0.271 Sum_probs=104.5
Q ss_pred CCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCcc-ccccCCcccccccccccccCCCCCCCccccC
Q psy3848 9 YPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSAD-WVVAGPDTALGKATYVTSDKGIGSSADWVVA 87 (552)
Q Consensus 9 ~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (552)
...++..+.+.||..+.+.+...... .....+|+|||+||+++++.. |..
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~---------------------------- 119 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVR---------------------------- 119 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHH----------------------------
Confidence 45677889999999999877643211 112457899999999887754 543
Q ss_pred CCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHH
Q psy3848 88 GPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTT 167 (552)
Q Consensus 88 ~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ 167 (552)
.++..+.++||+|+++|+||||.|.... +. +....+.. |+.+.++++..+++..++++|||||||.
T Consensus 120 ----~~~~~~~~~g~~vv~~d~rG~G~s~~~~---~~------~~~~~~~~-Dl~~~i~~l~~~~~~~~~~lvG~SlGg~ 185 (388)
T PLN02511 120 ----HMLLRARSKGWRVVVFNSRGCADSPVTT---PQ------FYSASFTG-DLRQVVDHVAGRYPSANLYAAGWSLGAN 185 (388)
T ss_pred ----HHHHHHHHCCCEEEEEecCCCCCCCCCC---cC------EEcCCchH-HHHHHHHHHHHHCCCCCEEEEEechhHH
Confidence 2666677789999999999999997421 11 11233443 8889999998888777899999999999
Q ss_pred HHHHHHHcCCcchhchheeeeccccc
Q psy3848 168 MFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 168 ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
+++.++.++|+. ..|.+++++++..
T Consensus 186 i~~~yl~~~~~~-~~v~~~v~is~p~ 210 (388)
T PLN02511 186 ILVNYLGEEGEN-CPLSGAVSLCNPF 210 (388)
T ss_pred HHHHHHHhcCCC-CCceEEEEECCCc
Confidence 999999999964 2366777776544
No 31
>PRK10985 putative hydrolase; Provisional
Probab=99.88 E-value=2.3e-21 Score=201.32 Aligned_cols=142 Identities=16% Similarity=0.154 Sum_probs=103.4
Q ss_pred CCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCC
Q psy3848 9 YPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAG 88 (552)
Q Consensus 9 ~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (552)
.+.+...+++.||..+.+.+..... ....+|+||++||+++++.....
T Consensus 29 ~~~~~~~~~~~dg~~~~l~w~~~~~---~~~~~p~vll~HG~~g~~~~~~~----------------------------- 76 (324)
T PRK10985 29 FTPYWQRLELPDGDFVDLAWSEDPA---QARHKPRLVLFHGLEGSFNSPYA----------------------------- 76 (324)
T ss_pred CCcceeEEECCCCCEEEEecCCCCc---cCCCCCEEEEeCCCCCCCcCHHH-----------------------------
Confidence 3456678999999888877653221 12457899999999987654222
Q ss_pred CcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHH
Q psy3848 89 PDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTM 168 (552)
Q Consensus 89 p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~i 168 (552)
+.++..|+++||+|+++|+||+|.|.... +. .+...... |+.+.++++.++++..+++++||||||.+
T Consensus 77 --~~~~~~l~~~G~~v~~~d~rG~g~~~~~~---~~-----~~~~~~~~--D~~~~i~~l~~~~~~~~~~~vG~S~GG~i 144 (324)
T PRK10985 77 --HGLLEAAQKRGWLGVVMHFRGCSGEPNRL---HR-----IYHSGETE--DARFFLRWLQREFGHVPTAAVGYSLGGNM 144 (324)
T ss_pred --HHHHHHHHHCCCEEEEEeCCCCCCCccCC---cc-----eECCCchH--HHHHHHHHHHHhCCCCCEEEEEecchHHH
Confidence 23888899999999999999999775311 11 12222222 88889999998888889999999999999
Q ss_pred HHHHHHcCCcchhchheeeeccccccc
Q psy3848 169 FYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 169 al~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
++.+++++++. ..+.++++++++...
T Consensus 145 ~~~~~~~~~~~-~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 145 LACLLAKEGDD-LPLDAAVIVSAPLML 170 (324)
T ss_pred HHHHHHhhCCC-CCccEEEEEcCCCCH
Confidence 99988887642 237777888876654
No 32
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.88 E-value=1.3e-21 Score=183.77 Aligned_cols=103 Identities=29% Similarity=0.473 Sum_probs=84.3
Q ss_pred EEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCC
Q psy3848 44 VFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSP 123 (552)
Q Consensus 44 VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp 123 (552)
|||+||+++++..|.. ++..|+ +||+|+++|+||+|.|.....
T Consensus 1 vv~~hG~~~~~~~~~~---------------------------------~~~~l~-~~~~v~~~d~~G~G~s~~~~~--- 43 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDP---------------------------------LAEALA-RGYRVIAFDLPGHGRSDPPPD--- 43 (228)
T ss_dssp EEEE-STTTTGGGGHH---------------------------------HHHHHH-TTSEEEEEECTTSTTSSSHSS---
T ss_pred eEEECCCCCCHHHHHH---------------------------------HHHHHh-CCCEEEEEecCCccccccccc---
Confidence 7999999999999998 899996 699999999999999985321
Q ss_pred CcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 124 MDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 124 ~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
+..+++++++ +.+..++++++.++++++||||||.+++.++.++|+ ++.++|+++|....
T Consensus 44 ----~~~~~~~~~~-----~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 44 ----YSPYSIEDYA-----EDLAELLDALGIKKVILVGHSMGGMIALRLAARYPD---RVKGLVLLSPPPPL 103 (228)
T ss_dssp ----GSGGSHHHHH-----HHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGG---GEEEEEEESESSSH
T ss_pred ----cCCcchhhhh-----hhhhhccccccccccccccccccccccccccccccc---ccccceeecccccc
Confidence 1146677776 455566677888899999999999999999999995 67777888887754
No 33
>KOG1454|consensus
Probab=99.88 E-value=2.1e-21 Score=202.93 Aligned_cols=143 Identities=23% Similarity=0.254 Sum_probs=102.8
Q ss_pred eEEEEECCCCc-EEEEEEEcCCCC--CCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCC
Q psy3848 12 ESYIVQTEDGY-LLEIHRIPYGRK--GRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAG 88 (552)
Q Consensus 12 e~~~V~t~DG~-~L~~~~i~~~~~--~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (552)
++..++...|. .....+++.... ..++..+++||++|||+++...|.. +.
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~---------------------------~~ 78 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRR---------------------------VV 78 (326)
T ss_pred cceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhh---------------------------hc
Confidence 44556666675 454555544310 0112478999999999999999998 44
Q ss_pred CcHHHHHHHHhC-CceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHH
Q psy3848 89 PDTALAYLLADK-GYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTT 167 (552)
Q Consensus 89 p~~~la~~La~~-Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ 167 (552)
+. |.+. |++|+++|+.|+|+|+.. +... .|+..+++ ..+..+....+..++++|||||||.
T Consensus 79 ~~------L~~~~~~~v~aiDl~G~g~~s~~----~~~~---~y~~~~~v-----~~i~~~~~~~~~~~~~lvghS~Gg~ 140 (326)
T KOG1454|consen 79 PL------LSKAKGLRVLAIDLPGHGYSSPL----PRGP---LYTLRELV-----ELIRRFVKEVFVEPVSLVGHSLGGI 140 (326)
T ss_pred cc------cccccceEEEEEecCCCCcCCCC----CCCC---ceehhHHH-----HHHHHHHHhhcCcceEEEEeCcHHH
Confidence 33 5554 699999999999976532 2222 36666666 5666666667777899999999999
Q ss_pred HHHHHHHcCCcchhchheeeeccccccccCCC
Q psy3848 168 MFYVLTSQRPEYNEKLLGAISLAPVAYLSRTR 199 (552)
Q Consensus 168 ial~~a~~~Pe~~~~l~~~I~laP~~~~~~~~ 199 (552)
+++.+|+.+|+.++++.++.+++|..+.....
T Consensus 141 va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~ 172 (326)
T KOG1454|consen 141 VALKAAAYYPETVDSLVLLDLLGPPVYSTPKG 172 (326)
T ss_pred HHHHHHHhCcccccceeeecccccccccCCcc
Confidence 99999999999888887766778777655433
No 34
>PRK07581 hypothetical protein; Validated
Probab=99.88 E-value=3.2e-21 Score=200.51 Aligned_cols=67 Identities=19% Similarity=0.150 Sum_probs=59.2
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCC-CCcccccccccchHHHHHHHHHHHHhhc
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTY-FNHLDFLWAKDVKALVYNDLLLVLKTFS 451 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~-~gH~~~l~~~~~~~~V~~~il~fL~~~~ 451 (552)
.+++|++|||+++|++|.++|++.++.+.+.+|++. ++++++ +||+.++ +.++++...|.+||+++-
T Consensus 270 ~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~---l~~i~~~~GH~~~~---~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 270 ALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAE---LRPIESIWGHLAGF---GQNPADIAFIDAALKELL 337 (339)
T ss_pred HHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCe---EEEeCCCCCccccc---cCcHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999999999976 777898 9999876 667788899999998763
No 35
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.87 E-value=6.2e-21 Score=199.39 Aligned_cols=160 Identities=20% Similarity=0.211 Sum_probs=104.0
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCc-cccccCCcccccccccccccCCCCCCCccccCCCcHHHH
Q psy3848 16 VQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSA-DWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALA 94 (552)
Q Consensus 16 V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la 94 (552)
+++.||..|.++.+.+. ..+.+|+++||+++++. .+.. .. +.++.-++.+-..+++ -......++
T Consensus 2 ~~~~~g~~l~~~~~~~~------~~kg~v~i~HG~~eh~~~~~~~-----~~--~~~~~~~~~~~~~~~r-y~~y~~~~~ 67 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK------NAIGIIVLIHGLKSHLRLQFLK-----IN--AKIVNNDRAVLIDTDN-YYIYKDSWI 67 (332)
T ss_pred ccCCCCCeEEEeeeecc------CCeEEEEEECCCchhhhhhhhh-----cC--cccCCCCeeEEEcCCc-ceEeeHHHH
Confidence 56889999988887654 35679999999999985 2211 00 0000000000000000 000113589
Q ss_pred HHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHH-------------------cC-C
Q psy3848 95 YLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK-------------------TD-H 154 (552)
Q Consensus 95 ~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~-------------------~g-~ 154 (552)
+.|+++||+|+++|+||||.|.+... ... + ..++++++. |+.+.++.+.+. .. .
T Consensus 68 ~~l~~~G~~V~~~D~rGHG~S~~~~~-~~g---~-~~~~~~~v~-Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (332)
T TIGR01607 68 ENFNKNGYSVYGLDLQGHGESDGLQN-LRG---H-INCFDDLVY-DVIQYMNRINDSIILENETKSDDESYDIVNTKENR 141 (332)
T ss_pred HHHHHCCCcEEEecccccCCCccccc-ccc---c-hhhHHHHHH-HHHHHHHHhhhhhccccccccccccccccccccCC
Confidence 99999999999999999999985321 000 0 136788886 888888877652 22 3
Q ss_pred CcEEEEEechhHHHHHHHHHcCCcc---h--hchheeeeccccccc
Q psy3848 155 TQMIYIGHSMGTTMFYVLTSQRPEY---N--EKLLGAISLAPVAYL 195 (552)
Q Consensus 155 ~ki~lVGHSmGG~ial~~a~~~Pe~---~--~~l~~~I~laP~~~~ 195 (552)
.+++++||||||.+++.++..+++. . ..+.|+|+++|+...
T Consensus 142 ~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i 187 (332)
T TIGR01607 142 LPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISI 187 (332)
T ss_pred CceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEE
Confidence 5799999999999999998766532 1 258888889987643
No 36
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.87 E-value=2.3e-20 Score=199.09 Aligned_cols=132 Identities=13% Similarity=0.151 Sum_probs=99.0
Q ss_pred CCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCC
Q psy3848 9 YPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAG 88 (552)
Q Consensus 9 ~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (552)
.+.......+.||+.+.+... +. +.+++|||+||++++...|..
T Consensus 102 ~~~~~~~~~~~~~~~~~y~~~--G~-----~~~~~ivllHG~~~~~~~w~~----------------------------- 145 (383)
T PLN03084 102 LKMGAQSQASSDLFRWFCVES--GS-----NNNPPVLLIHGFPSQAYSYRK----------------------------- 145 (383)
T ss_pred ccccceeEEcCCceEEEEEec--CC-----CCCCeEEEECCCCCCHHHHHH-----------------------------
Confidence 333344444677776654433 31 357899999999999999988
Q ss_pred CcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHH
Q psy3848 89 PDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTM 168 (552)
Q Consensus 89 p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~i 168 (552)
++..|++ +|+|+++|+||||.|+.+.. .... ++++++++. .+..++++++++++++|||||||++
T Consensus 146 ----~~~~L~~-~~~Via~DlpG~G~S~~p~~--~~~~---~ys~~~~a~-----~l~~~i~~l~~~~~~LvG~s~GG~i 210 (383)
T PLN03084 146 ----VLPVLSK-NYHAIAFDWLGFGFSDKPQP--GYGF---NYTLDEYVS-----SLESLIDELKSDKVSLVVQGYFSPP 210 (383)
T ss_pred ----HHHHHhc-CCEEEEECCCCCCCCCCCcc--cccc---cCCHHHHHH-----HHHHHHHHhCCCCceEEEECHHHHH
Confidence 7888886 79999999999999985321 0111 577888884 4445555778889999999999999
Q ss_pred HHHHHHcCCcchhchheeeecccccc
Q psy3848 169 FYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 169 al~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
++.+|.++|+ ++.++|+++|...
T Consensus 211 a~~~a~~~P~---~v~~lILi~~~~~ 233 (383)
T PLN03084 211 VVKYASAHPD---KIKKLILLNPPLT 233 (383)
T ss_pred HHHHHHhChH---hhcEEEEECCCCc
Confidence 9999999994 5777788888643
No 37
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.87 E-value=3.4e-21 Score=187.59 Aligned_cols=229 Identities=16% Similarity=0.179 Sum_probs=158.8
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCC
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHI 119 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~ 119 (552)
.+..|||+|||.|++++... |++.|.++||+|++|.+||||....
T Consensus 14 G~~AVLllHGFTGt~~Dvr~---------------------------------Lgr~L~e~GyTv~aP~ypGHG~~~e-- 58 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRM---------------------------------LGRYLNENGYTVYAPRYPGHGTLPE-- 58 (243)
T ss_pred CCEEEEEEeccCCCcHHHHH---------------------------------HHHHHHHCCceEecCCCCCCCCCHH--
Confidence 35899999999999999888 9999999999999999999996652
Q ss_pred CCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccccccCCC
Q psy3848 120 SYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSRTR 199 (552)
Q Consensus 120 ~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~~~~~ 199 (552)
.|-..+.++|.+ |+.+..+++.+ .+.+.+.++|.||||.+++.+|.++| +.+++.+|++.......
T Consensus 59 -------~fl~t~~~DW~~-~v~d~Y~~L~~-~gy~eI~v~GlSmGGv~alkla~~~p-----~K~iv~m~a~~~~k~~~ 124 (243)
T COG1647 59 -------DFLKTTPRDWWE-DVEDGYRDLKE-AGYDEIAVVGLSMGGVFALKLAYHYP-----PKKIVPMCAPVNVKSWR 124 (243)
T ss_pred -------HHhcCCHHHHHH-HHHHHHHHHHH-cCCCeEEEEeecchhHHHHHHHhhCC-----ccceeeecCCcccccch
Confidence 234677889987 88888888875 47789999999999999999999998 55667777766544444
Q ss_pred chhhhhhhhhhhHHHHHHHhcCccccchhhhHHHHHHHHHhhhhhhhhhhHHHHHHHhCCCCccccccchHHHhccCCCC
Q psy3848 200 SPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCEDFLFILCGHDPYQFKMSLLPVILGHTPAG 279 (552)
Q Consensus 200 ~pl~~l~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 279 (552)
..+..+..+..+ .....+. .. +.+.+ .+..+ .+
T Consensus 125 ~iie~~l~y~~~---~kk~e~k----~~----e~~~~---------------e~~~~---~~------------------ 157 (243)
T COG1647 125 IIIEGLLEYFRN---AKKYEGK----DQ----EQIDK---------------EMKSY---KD------------------ 157 (243)
T ss_pred hhhHHHHHHHHH---hhhccCC----CH----HHHHH---------------HHHHh---hc------------------
Confidence 433222111100 0000000 00 00000 00000 00
Q ss_pred cchhhHHHHHhhhccccccccccCcccccccccCCCCCCccccccccceeeeccccccchhhhHHHhhcccchhhhhhcc
Q psy3848 280 GSTRTLVHFAQFIDSGKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQVTIRLGLVDLFRKFRQF 359 (552)
Q Consensus 280 ~s~~~~~~~~q~~~~~~f~~~d~~~~~n~~~y~~~~p~~~~~~~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~f~~~ 359 (552)
....+...+..++..
T Consensus 158 ~~~~~~~~~~~~i~~----------------------------------------------------------------- 172 (243)
T COG1647 158 TPMTTTAQLKKLIKD----------------------------------------------------------------- 172 (243)
T ss_pred chHHHHHHHHHHHHH-----------------------------------------------------------------
Confidence 000011111111110
Q ss_pred ccccccccccccCCCCCCCCCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHH
Q psy3848 360 DYGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALV 439 (552)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V 439 (552)
.+..+..|..|++++.|.+|.++|.+++..++..+-+.. +.++.+++.||. +.....++.|
T Consensus 173 ----------------~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~-KeL~~~e~SgHV--It~D~Erd~v 233 (243)
T COG1647 173 ----------------ARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDD-KELKWLEGSGHV--ITLDKERDQV 233 (243)
T ss_pred ----------------HHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCc-ceeEEEccCCce--eecchhHHHH
Confidence 011678899999999999999999999999999976543 378889999998 6778899999
Q ss_pred HHHHHHHHH
Q psy3848 440 YNDLLLVLK 448 (552)
Q Consensus 440 ~~~il~fL~ 448 (552)
..+|+.||+
T Consensus 234 ~e~V~~FL~ 242 (243)
T COG1647 234 EEDVITFLE 242 (243)
T ss_pred HHHHHHHhh
Confidence 999999996
No 38
>KOG4409|consensus
Probab=99.87 E-value=4.9e-21 Score=197.42 Aligned_cols=145 Identities=22% Similarity=0.189 Sum_probs=109.3
Q ss_pred ccccccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCC
Q psy3848 2 KIIRRHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSS 81 (552)
Q Consensus 2 ~~~~~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~ 81 (552)
+++...+.+.+...|+..++..+........ +..+.|+||+||++++...|..
T Consensus 56 ril~~~~v~~~~~~v~i~~~~~iw~~~~~~~-----~~~~~plVliHGyGAg~g~f~~---------------------- 108 (365)
T KOG4409|consen 56 RILSSVPVPYSKKYVRIPNGIEIWTITVSNE-----SANKTPLVLIHGYGAGLGLFFR---------------------- 108 (365)
T ss_pred hhhhhcCCCcceeeeecCCCceeEEEeeccc-----ccCCCcEEEEeccchhHHHHHH----------------------
Confidence 4566777788888888887754443333322 2578999999999999999998
Q ss_pred CccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEE
Q psy3848 82 ADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIG 161 (552)
Q Consensus 82 ~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVG 161 (552)
|.+. |++ ..+|+++|++|+|.|+.+.- +-+.. -.-.. ..+-|++.+.+.++++++|||
T Consensus 109 -----Nf~~------La~-~~~vyaiDllG~G~SSRP~F-~~d~~----~~e~~-----fvesiE~WR~~~~L~KmilvG 166 (365)
T KOG4409|consen 109 -----NFDD------LAK-IRNVYAIDLLGFGRSSRPKF-SIDPT----TAEKE-----FVESIEQWRKKMGLEKMILVG 166 (365)
T ss_pred -----hhhh------hhh-cCceEEecccCCCCCCCCCC-CCCcc----cchHH-----HHHHHHHHHHHcCCcceeEee
Confidence 4443 777 79999999999999986542 11110 00112 336778888899999999999
Q ss_pred echhHHHHHHHHHcCCcchhchheeeeccccccccCC
Q psy3848 162 HSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSRT 198 (552)
Q Consensus 162 HSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~~~~ 198 (552)
|||||.++..||..||+++++| |+++|.+.....
T Consensus 167 HSfGGYLaa~YAlKyPerV~kL---iLvsP~Gf~~~~ 200 (365)
T KOG4409|consen 167 HSFGGYLAAKYALKYPERVEKL---ILVSPWGFPEKP 200 (365)
T ss_pred ccchHHHHHHHHHhChHhhceE---EEecccccccCC
Confidence 9999999999999999877766 888998776644
No 39
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.87 E-value=1.2e-20 Score=184.65 Aligned_cols=100 Identities=19% Similarity=0.191 Sum_probs=79.5
Q ss_pred CcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCC
Q psy3848 41 KEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHIS 120 (552)
Q Consensus 41 ~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~ 120 (552)
+|+|||+||+++++..|.. ++..| + +|+|+++|+||||.|....
T Consensus 2 ~p~vvllHG~~~~~~~w~~---------------------------------~~~~l-~-~~~vi~~D~~G~G~S~~~~- 45 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQP---------------------------------VGEAL-P-DYPRLYIDLPGHGGSAAIS- 45 (242)
T ss_pred CCEEEEECCCCCChHHHHH---------------------------------HHHHc-C-CCCEEEecCCCCCCCCCcc-
Confidence 5789999999999999988 77777 3 6999999999999997432
Q ss_pred CCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccc
Q psy3848 121 YSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPV 192 (552)
Q Consensus 121 ~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~ 192 (552)
..++++++. .+..+++.++++++++|||||||.+++.+|.++|+. ++.+++++++.
T Consensus 46 ---------~~~~~~~~~-----~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~--~v~~lvl~~~~ 101 (242)
T PRK11126 46 ---------VDGFADVSR-----LLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAG--GLCGLIVEGGN 101 (242)
T ss_pred ---------ccCHHHHHH-----HHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcc--cccEEEEeCCC
Confidence 235676674 444445567889999999999999999999998742 36666776654
No 40
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=7.3e-20 Score=196.26 Aligned_cols=111 Identities=17% Similarity=0.109 Sum_probs=83.3
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
+++++|||+||++++...|.. .+..|++ +|+|+++|+||||.|+..
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~---------------------------------~~~~L~~-~~~vi~~D~rG~G~S~~~ 148 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFR---------------------------------NFDALAS-RFRVIAIDQLGWGGSSRP 148 (402)
T ss_pred CCCCEEEEECCCCcchhHHHH---------------------------------HHHHHHh-CCEEEEECCCCCCCCCCC
Confidence 467999999999999888887 5677877 699999999999999742
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
.. . ..+.++... .+.+.+..+++..++++++++||||||.+++.+|.++|+ ++.++|+++|....
T Consensus 149 ~~-~-------~~~~~~~~~-~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~---~v~~lvl~~p~~~~ 213 (402)
T PLN02894 149 DF-T-------CKSTEETEA-WFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPE---HVQHLILVGPAGFS 213 (402)
T ss_pred Cc-c-------cccHHHHHH-HHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCch---hhcEEEEECCcccc
Confidence 21 0 011122221 234555566667888999999999999999999999995 46666888886543
No 41
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.87 E-value=1.1e-20 Score=180.22 Aligned_cols=105 Identities=26% Similarity=0.371 Sum_probs=83.6
Q ss_pred CcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCC
Q psy3848 41 KEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHIS 120 (552)
Q Consensus 41 ~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~ 120 (552)
+++|||+||++++...|.. ++..|+ +||+|+++|+||+|.|.....
T Consensus 1 ~~~vv~~hG~~~~~~~~~~---------------------------------~~~~L~-~~~~v~~~d~~g~G~s~~~~~ 46 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQA---------------------------------LIELLG-PHFRCLAIDLPGHGSSQSPDE 46 (251)
T ss_pred CCEEEEEcCCCCchhhHHH---------------------------------HHHHhc-ccCeEEEEcCCCCCCCCCCCc
Confidence 4789999999999999988 888898 699999999999999975321
Q ss_pred CCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccc
Q psy3848 121 YSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 121 ~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
. . .+++++++. +.+..+++.++.++++++||||||.+++.+|.++|+ .+.+++++++..
T Consensus 47 ~----~---~~~~~~~~~----~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~---~v~~lil~~~~~ 105 (251)
T TIGR03695 47 I----E---RYDFEEAAQ----DILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPE---RVQGLILESGSP 105 (251)
T ss_pred c----C---hhhHHHHHH----HHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCch---heeeeEEecCCC
Confidence 0 1 345666663 225566677788899999999999999999999995 566667777643
No 42
>PRK13604 luxD acyl transferase; Provisional
Probab=99.85 E-value=5.9e-20 Score=189.52 Aligned_cols=135 Identities=16% Similarity=0.203 Sum_probs=105.6
Q ss_pred CceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCC
Q psy3848 10 PAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGP 89 (552)
Q Consensus 10 p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 89 (552)
-...|.+.+.||..|..++.++... ...+.++||++||++++...+..
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~~--~~~~~~~vIi~HGf~~~~~~~~~------------------------------ 55 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKEN--SPKKNNTILIASGFARRMDHFAG------------------------------ 55 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCccc--CCCCCCEEEEeCCCCCChHHHHH------------------------------
Confidence 3466889999999999999887521 12456899999999998765555
Q ss_pred cHHHHHHHHhCCceEEEEcCCCC-CCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHH
Q psy3848 90 DTALAYLLADKGYDVWLGNARGN-TYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTM 168 (552)
Q Consensus 90 ~~~la~~La~~Gy~Via~D~RG~-G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~i 168 (552)
+|++|+++||.|+.+|.||+ |.|++... ++++.... .|+.+.|+++++. +.+++.++||||||.+
T Consensus 56 ---~A~~La~~G~~vLrfD~rg~~GeS~G~~~---------~~t~s~g~-~Dl~aaid~lk~~-~~~~I~LiG~SmGgav 121 (307)
T PRK13604 56 ---LAEYLSSNGFHVIRYDSLHHVGLSSGTID---------EFTMSIGK-NSLLTVVDWLNTR-GINNLGLIAASLSARI 121 (307)
T ss_pred ---HHHHHHHCCCEEEEecCCCCCCCCCCccc---------cCcccccH-HHHHHHHHHHHhc-CCCceEEEEECHHHHH
Confidence 99999999999999999987 99975332 23333333 4999999999875 5678999999999999
Q ss_pred HHHHHHcCCcchhchheeeeccccccc
Q psy3848 169 FYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 169 al~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
++..|+.. .+.++|+.||....
T Consensus 122 a~~~A~~~-----~v~~lI~~sp~~~l 143 (307)
T PRK13604 122 AYEVINEI-----DLSFLITAVGVVNL 143 (307)
T ss_pred HHHHhcCC-----CCCEEEEcCCcccH
Confidence 87776543 27778899988764
No 43
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.85 E-value=1e-19 Score=215.06 Aligned_cols=85 Identities=13% Similarity=0.129 Sum_probs=75.7
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhcccccccc
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKTRARSE 458 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~~~~~~~~ 458 (552)
+|++|++|+|+|+|++|.++|++.++.+.+.+|+.. ....++++||++++.+..+++.+|+.|.+||++++....+.+
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~--~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~~~~~~ 369 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAE--VYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGDGDKPE 369 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCe--EEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccCCCCCc
Confidence 689999999999999999999999999999999876 336689999999999999999999999999999998777766
Q ss_pred ccccccc
Q psy3848 459 VLTVTNV 465 (552)
Q Consensus 459 ~~~~~~~ 465 (552)
.+..+..
T Consensus 370 ~~~~~~~ 376 (994)
T PRK07868 370 NIHLMAD 376 (994)
T ss_pred ccccccc
Confidence 6655544
No 44
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.85 E-value=1.7e-19 Score=199.04 Aligned_cols=116 Identities=16% Similarity=0.198 Sum_probs=95.2
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
..++|||++||+.....+|.. .|+++++++|+++||+|+++|+||+|.|..
T Consensus 186 ~~~~PlLiVp~~i~k~yilDL----------------------------~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~- 236 (532)
T TIGR01838 186 VHKTPLLIVPPWINKYYILDL----------------------------RPQNSLVRWLVEQGHTVFVISWRNPDASQA- 236 (532)
T ss_pred CCCCcEEEECcccccceeeec----------------------------ccchHHHHHHHHCCcEEEEEECCCCCcccc-
Confidence 357999999999888888876 778899999999999999999999998864
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHH----HHHcC-Ccchhchheeeeccccc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYV----LTSQR-PEYNEKLLGAISLAPVA 193 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~----~a~~~-Pe~~~~l~~~I~laP~~ 193 (552)
.+++++++..++.++|+.|++.+|.++++++||||||+++.. +++.+ + +++.+++++++..
T Consensus 237 -----------~~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~---~rv~slvll~t~~ 302 (532)
T TIGR01838 237 -----------DKTFDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDD---KRIKSATFFTTLL 302 (532)
T ss_pred -----------cCChhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCC---CccceEEEEecCc
Confidence 344667777678899999999999999999999999998632 45555 5 4577778888776
Q ss_pred cccC
Q psy3848 194 YLSR 197 (552)
Q Consensus 194 ~~~~ 197 (552)
.++.
T Consensus 303 Df~~ 306 (532)
T TIGR01838 303 DFSD 306 (532)
T ss_pred CCCC
Confidence 6553
No 45
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.85 E-value=8.4e-20 Score=190.81 Aligned_cols=67 Identities=21% Similarity=0.179 Sum_probs=58.3
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhC-CCCccceEEEeCC-CCcccccccccchHHHHHHHHHHHHhhc
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLL-PNPVGLFKVNFTY-FNHLDFLWAKDVKALVYNDLLLVLKTFS 451 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~l-p~~~~~~~v~~~~-~gH~~~l~~~~~~~~V~~~il~fL~~~~ 451 (552)
++++|++|+|+++|++|.++|++.++++.+.+ |+.. ++++++ +||+.++ +.++.|...|.+||++..
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~---l~~i~~~aGH~~~l---E~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGS---LRVLRSPYGHDAFL---KETDRIDAILTTALRSTG 340 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCe---EEEEeCCccHHHHh---cCHHHHHHHHHHHHHhcc
Confidence 56789999999999999999999999999988 5665 777884 9999876 688999999999997654
No 46
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.84 E-value=4.4e-20 Score=193.54 Aligned_cols=67 Identities=19% Similarity=0.073 Sum_probs=56.7
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccc-eE-EEeCCCCcccccccccchHHHHHHHHHHHH
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGL-FK-VNFTYFNHLDFLWAKDVKALVYNDLLLVLK 448 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~-~~-v~~~~~gH~~~l~~~~~~~~V~~~il~fL~ 448 (552)
.+++|++|+|+|+|++|.++|++.++.+.+.+|+.... .+ .+++++||+.++ +.++++.+.|.+||+
T Consensus 283 ~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l---e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 283 ALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL---VETDQVEELIRGFLR 351 (351)
T ss_pred HHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh---cCHHHHHHHHHHHhC
Confidence 67899999999999999999999999999999987621 11 146789999876 678899999999984
No 47
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=3.1e-20 Score=197.29 Aligned_cols=71 Identities=14% Similarity=0.067 Sum_probs=59.7
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCcc-ceEEEeC-CCCcccccccccchHHHHHHHHHHHHhhcc
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVG-LFKVNFT-YFNHLDFLWAKDVKALVYNDLLLVLKTFSK 452 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~-~~~v~~~-~~gH~~~l~~~~~~~~V~~~il~fL~~~~~ 452 (552)
.+++|++|+|+|+|++|.++|++.++.+.+.+|+... ..+++++ ++||+.++ +.++++...|.+||++...
T Consensus 304 ~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l---e~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 304 ALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL---LDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred HHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh---cCHHHHHHHHHHHHHhhhh
Confidence 6789999999999999999999999999999998621 1255564 89999886 6788899999999987653
No 48
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.84 E-value=2.1e-19 Score=184.58 Aligned_cols=127 Identities=20% Similarity=0.217 Sum_probs=91.2
Q ss_pred ceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCc
Q psy3848 11 AESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPD 90 (552)
Q Consensus 11 ~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 90 (552)
..+..+...||..+.+... +. .++++|||+||++++...+..
T Consensus 4 ~~~~~~~~~~~~~l~y~~~--g~-----~~~~~lvllHG~~~~~~~~~~------------------------------- 45 (306)
T TIGR01249 4 FVSGYLNVSDNHQLYYEQS--GN-----PDGKPVVFLHGGPGSGTDPGC------------------------------- 45 (306)
T ss_pred ccCCeEEcCCCcEEEEEEC--cC-----CCCCEEEEECCCCCCCCCHHH-------------------------------
Confidence 4566788889987766543 32 246789999998877654322
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHH
Q psy3848 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFY 170 (552)
Q Consensus 91 ~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial 170 (552)
...+...+|+|+++|+||||.|..... ...++.++++ +.+..+++++++++++++||||||.+++
T Consensus 46 ---~~~~~~~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~-----~dl~~l~~~l~~~~~~lvG~S~GG~ia~ 110 (306)
T TIGR01249 46 ---RRFFDPETYRIVLFDQRGCGKSTPHAC-------LEENTTWDLV-----ADIEKLREKLGIKNWLVFGGSWGSTLAL 110 (306)
T ss_pred ---HhccCccCCEEEEECCCCCCCCCCCCC-------cccCCHHHHH-----HHHHHHHHHcCCCCEEEEEECHHHHHHH
Confidence 233444589999999999999974321 0134455444 6677777888889999999999999999
Q ss_pred HHHHcCCcchhchheeeeccccc
Q psy3848 171 VLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 171 ~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
.++.++|++ +.++|++++..
T Consensus 111 ~~a~~~p~~---v~~lvl~~~~~ 130 (306)
T TIGR01249 111 AYAQTHPEV---VTGLVLRGIFL 130 (306)
T ss_pred HHHHHChHh---hhhheeecccc
Confidence 999999965 55556666543
No 49
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.84 E-value=1.1e-19 Score=189.47 Aligned_cols=105 Identities=25% Similarity=0.352 Sum_probs=84.9
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
+++++|||+||++++...|.. ++..|.+ +|+|+++|+||||.|...
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~---------------------------------~~~~l~~-~~~v~~~d~~g~G~s~~~ 174 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLF---------------------------------NHAALAA-GRPVIALDLPGHGASSKA 174 (371)
T ss_pred CCCCeEEEECCCCCccchHHH---------------------------------HHHHHhc-CCEEEEEcCCCCCCCCCC
Confidence 457899999999999999988 7778877 599999999999999642
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
.. ..++++++ +.+..+++.++.++++++||||||.+++.+|.++|+ ++.++|+++|...
T Consensus 175 ~~---------~~~~~~~~-----~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~v~~lv~~~~~~~ 233 (371)
T PRK14875 175 VG---------AGSLDELA-----AAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQ---RVASLTLIAPAGL 233 (371)
T ss_pred CC---------CCCHHHHH-----HHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCch---heeEEEEECcCCc
Confidence 21 34566555 556666778888899999999999999999999884 5667788887643
No 50
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.84 E-value=2e-19 Score=182.83 Aligned_cols=105 Identities=23% Similarity=0.302 Sum_probs=82.5
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
+++|+|||+||+++++..|.. ++..|+++||+|+++|+||||.|...
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~---------------------------------~~~~L~~~g~~vi~~dl~g~G~s~~~ 62 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYK---------------------------------IRCLMENSGYKVTCIDLKSAGIDQSD 62 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHH---------------------------------HHHHHHhCCCEEEEecccCCCCCCCC
Confidence 568899999999999999988 88899988999999999999987532
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcC-CCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD-HTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPV 192 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g-~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~ 192 (552)
. . . .+++++++. ++.+ +++.++ .+++++|||||||.+++.++.++|+ ++.++|.+++.
T Consensus 63 ~----~-~---~~~~~~~~~-~l~~----~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~---~v~~lv~~~~~ 121 (273)
T PLN02211 63 A----D-S---VTTFDEYNK-PLID----FLSSLPENEKVILVGHSAGGLSVTQAIHRFPK---KICLAVYVAAT 121 (273)
T ss_pred c----c-c---CCCHHHHHH-HHHH----HHHhcCCCCCEEEEEECchHHHHHHHHHhChh---heeEEEEeccc
Confidence 1 1 1 256777774 3333 333443 5799999999999999999999985 56666777664
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.83 E-value=1.1e-18 Score=187.95 Aligned_cols=136 Identities=16% Similarity=0.136 Sum_probs=97.7
Q ss_pred cccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCC-ccccccCCcccccccccccccCCCCCCCc
Q psy3848 5 RRHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSS-ADWVVAGPDTALGKATYVTSDKGIGSSAD 83 (552)
Q Consensus 5 ~~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (552)
+..+++++...+.+.||..|..+.+.+... ++.|+||+.||+.+.. ..|..
T Consensus 162 ~~~~~~~e~v~i~~~~g~~l~g~l~~P~~~----~~~P~Vli~gG~~~~~~~~~~~------------------------ 213 (414)
T PRK05077 162 KRLPGELKELEFPIPGGGPITGFLHLPKGD----GPFPTVLVCGGLDSLQTDYYRL------------------------ 213 (414)
T ss_pred hhcCCceEEEEEEcCCCcEEEEEEEECCCC----CCccEEEEeCCcccchhhhHHH------------------------
Confidence 445778999999999997777665433211 4567777777766653 45655
Q ss_pred cccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHH--cCCCcEEEEE
Q psy3848 84 WVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK--TDHTQMIYIG 161 (552)
Q Consensus 84 ~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~--~g~~ki~lVG 161 (552)
++..|+++||.|+++|+||+|.|..... . .....+. .+.++++... .+.+++.++|
T Consensus 214 ---------~~~~La~~Gy~vl~~D~pG~G~s~~~~~-~--------~d~~~~~----~avld~l~~~~~vd~~ri~l~G 271 (414)
T PRK05077 214 ---------FRDYLAPRGIAMLTIDMPSVGFSSKWKL-T--------QDSSLLH----QAVLNALPNVPWVDHTRVAAFG 271 (414)
T ss_pred ---------HHHHHHhCCCEEEEECCCCCCCCCCCCc-c--------ccHHHHH----HHHHHHHHhCcccCcccEEEEE
Confidence 7888999999999999999999964210 1 1111111 2556666544 2567999999
Q ss_pred echhHHHHHHHHHcCCcchhchheeeeccccc
Q psy3848 162 HSMGTTMFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 162 HSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
|||||.+++.+|+.+| ++|.++|+++|+.
T Consensus 272 ~S~GG~~Al~~A~~~p---~ri~a~V~~~~~~ 300 (414)
T PRK05077 272 FRFGANVAVRLAYLEP---PRLKAVACLGPVV 300 (414)
T ss_pred EChHHHHHHHHHHhCC---cCceEEEEECCcc
Confidence 9999999999999888 4577788888765
No 52
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.82 E-value=1.4e-18 Score=178.49 Aligned_cols=290 Identities=21% Similarity=0.193 Sum_probs=181.8
Q ss_pred ceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCc
Q psy3848 11 AESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPD 90 (552)
Q Consensus 11 ~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 90 (552)
..+..|.+.||..+.+.+...... ..+|.||++||+.|+++.-+.
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p~~----~~~P~vVl~HGL~G~s~s~y~------------------------------- 93 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDPRA----AKKPLVVLFHGLEGSSNSPYA------------------------------- 93 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCccc----cCCceEEEEeccCCCCcCHHH-------------------------------
Confidence 356689999998888777654332 567999999999999987665
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHH
Q psy3848 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFY 170 (552)
Q Consensus 91 ~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial 170 (552)
+.++..+.++||.|+++|+||++++... +|. -| +.-...|+..+++.++......++..||.|+||.+..
T Consensus 94 r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~---~p~-----~y--h~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa 163 (345)
T COG0429 94 RGLMRALSRRGWLVVVFHFRGCSGEANT---SPR-----LY--HSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLA 163 (345)
T ss_pred HHHHHHHHhcCCeEEEEecccccCCccc---Ccc-----ee--cccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHH
Confidence 5799999999999999999999988753 222 11 2222238889999998888888999999999997777
Q ss_pred HHHHcCCcchhchheeeeccccccccCCCchhhhhhhhhhhHHHHHHHhcCccccchhhhHHHHHHHHHhhhhhhhhhhH
Q psy3848 171 VLTSQRPEYNEKLLGAISLAPVAYLSRTRSPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCE 250 (552)
Q Consensus 171 ~~a~~~Pe~~~~l~~~I~laP~~~~~~~~~pl~~l~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (552)
.+.....+. ..+.++++++.+..+......+ -..+. . .+-...+.+.+.+.+...
T Consensus 164 ~ylgeeg~d-~~~~aa~~vs~P~Dl~~~~~~l--~~~~s-----------~--~ly~r~l~~~L~~~~~~k--------- 218 (345)
T COG0429 164 NYLGEEGDD-LPLDAAVAVSAPFDLEACAYRL--DSGFS-----------L--RLYSRYLLRNLKRNAARK--------- 218 (345)
T ss_pred HHHHhhccC-cccceeeeeeCHHHHHHHHHHh--cCchh-----------h--hhhHHHHHHHHHHHHHHH---------
Confidence 776654432 2333333333222111000000 00000 0 011111111121111110
Q ss_pred HHHHHHhCCCCccccccchHHHhccCCCCcchhhHHHHHhhhccccccccccCcccccccccCCCCCCccccccccceee
Q psy3848 251 DFLFILCGHDPYQFKMSLLPVILGHTPAGGSTRTLVHFAQFIDSGKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAF 330 (552)
Q Consensus 251 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~q~~~~~~f~~~d~~~~~n~~~y~~~~p~~~~~~~i~~~~~~ 330 (552)
+..+.+..+. .+ ..+.....++++||. .+++|...
T Consensus 219 --l~~l~~~~p~------------------~~-----~~~ik~~~ti~eFD~--------------------~~Tap~~G 253 (345)
T COG0429 219 --LKELEPSLPG------------------TV-----LAAIKRCRTIREFDD--------------------LLTAPLHG 253 (345)
T ss_pred --HHhcCcccCc------------------HH-----HHHHHhhchHHhccc--------------------eeeecccC
Confidence 0000000000 00 111222234566663 24555555
Q ss_pred eccccccchhhhHHHhhcccchhhhhhccccccccccccccCCCCCCCCCCCccccEEEEEeCCCCCCCHHHHHHHHH-h
Q psy3848 331 FYADNDLLTNEQVTIRLGLVDLFRKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYT-L 409 (552)
Q Consensus 331 ~~~~~d~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PvLii~G~~D~i~p~~~~~~l~~-~ 409 (552)
|....| |++++.+...|++|.+|+|||++.+|++++++.+..... .
T Consensus 254 f~da~d---------------------------------YYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~ 300 (345)
T COG0429 254 FADAED---------------------------------YYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEML 300 (345)
T ss_pred CCcHHH---------------------------------HHHhccccccccccccceEEEecCCCCCCChhhCCcchhcC
Confidence 544333 677788888999999999999999999999999987766 4
Q ss_pred CCCCccceEEEeCCCCcccccccccchH--HHHHHHHHHHHhhc
Q psy3848 410 LPNPVGLFKVNFTYFNHLDFLWAKDVKA--LVYNDLLLVLKTFS 451 (552)
Q Consensus 410 lp~~~~~~~v~~~~~gH~~~l~~~~~~~--~V~~~il~fL~~~~ 451 (552)
.|+.. +..-+..||++|+-+..... ...+.|.+||+.+.
T Consensus 301 np~v~---l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 301 NPNVL---LQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred CCceE---EEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 44544 67778999999997654444 67799999998765
No 53
>PRK05855 short chain dehydrogenase; Validated
Probab=99.81 E-value=7.1e-19 Score=193.53 Aligned_cols=122 Identities=21% Similarity=0.303 Sum_probs=88.9
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHH
Q psy3848 15 IVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALA 94 (552)
Q Consensus 15 ~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la 94 (552)
.+.+.||..|.++.+ +. .++++|||+||+++++..|.. ++
T Consensus 6 ~~~~~~g~~l~~~~~--g~-----~~~~~ivllHG~~~~~~~w~~---------------------------------~~ 45 (582)
T PRK05855 6 TVVSSDGVRLAVYEW--GD-----PDRPTVVLVHGYPDNHEVWDG---------------------------------VA 45 (582)
T ss_pred EEEeeCCEEEEEEEc--CC-----CCCCeEEEEcCCCchHHHHHH---------------------------------HH
Confidence 345568877766544 21 347899999999999999988 78
Q ss_pred HHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCc-EEEEEechhHHHHHHHH
Q psy3848 95 YLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQ-MIYIGHSMGTTMFYVLT 173 (552)
Q Consensus 95 ~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~k-i~lVGHSmGG~ial~~a 173 (552)
..|+ +||+|+++|+||||.|.... ... .+++++++. |+.+.++ +++..+ ++++||||||.+++.++
T Consensus 46 ~~L~-~~~~Vi~~D~~G~G~S~~~~----~~~---~~~~~~~a~-dl~~~i~----~l~~~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 46 PLLA-DRFRVVAYDVRGAGRSSAPK----RTA---AYTLARLAD-DFAAVID----AVSPDRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred HHhh-cceEEEEecCCCCCCCCCCC----ccc---ccCHHHHHH-HHHHHHH----HhCCCCcEEEEecChHHHHHHHHH
Confidence 8884 58999999999999997422 111 477888885 5555555 455555 99999999999998887
Q ss_pred HcCCcchhchheeeecc
Q psy3848 174 SQRPEYNEKLLGAISLA 190 (552)
Q Consensus 174 ~~~Pe~~~~l~~~I~la 190 (552)
.+ ++....+.+++.++
T Consensus 113 ~~-~~~~~~v~~~~~~~ 128 (582)
T PRK05855 113 TR-PRAAGRIASFTSVS 128 (582)
T ss_pred hC-ccchhhhhhheecc
Confidence 66 55555665544443
No 54
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.79 E-value=1.5e-17 Score=169.07 Aligned_cols=86 Identities=21% Similarity=0.283 Sum_probs=69.6
Q ss_pred HHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHc-CCCcEEEEEechhHHHHHH
Q psy3848 93 LAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT-DHTQMIYIGHSMGTTMFYV 171 (552)
Q Consensus 93 la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~-g~~ki~lVGHSmGG~ial~ 171 (552)
++..|+++||+|+++|+||||.|... ..+++++.. |+.+.++++.+.. +.++++++||||||.+++.
T Consensus 49 la~~l~~~G~~v~~~Dl~G~G~S~~~-----------~~~~~~~~~-d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~ 116 (274)
T TIGR03100 49 LARRLAEAGFPVLRFDYRGMGDSEGE-----------NLGFEGIDA-DIAAAIDAFREAAPHLRRIVAWGLCDAASAALL 116 (274)
T ss_pred HHHHHHHCCCEEEEeCCCCCCCCCCC-----------CCCHHHHHH-HHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHH
Confidence 78999999999999999999998742 123555554 8889999988765 6778999999999999999
Q ss_pred HHHcCCcchhchheeeecccccc
Q psy3848 172 LTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 172 ~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
+|.. + .++.++|+++|...
T Consensus 117 ~a~~-~---~~v~~lil~~p~~~ 135 (274)
T TIGR03100 117 YAPA-D---LRVAGLVLLNPWVR 135 (274)
T ss_pred Hhhh-C---CCccEEEEECCccC
Confidence 8765 3 36888899988643
No 55
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.78 E-value=1.3e-17 Score=205.19 Aligned_cols=138 Identities=15% Similarity=0.246 Sum_probs=94.3
Q ss_pred CCCceEEEEECC-CCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCcccc
Q psy3848 8 GYPAESYIVQTE-DGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVV 86 (552)
Q Consensus 8 g~p~e~~~V~t~-DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (552)
|.....+.+..+ ||....+++...+. ...+++|||+||++++...|..
T Consensus 1341 ~~~l~~~~~~v~~~~~~~~i~~~~~G~----~~~~~~vVllHG~~~s~~~w~~--------------------------- 1389 (1655)
T PLN02980 1341 EEQVRTYELRVDVDGFSCLIKVHEVGQ----NAEGSVVLFLHGFLGTGEDWIP--------------------------- 1389 (1655)
T ss_pred cCCCceEEEEEccCceEEEEEEEecCC----CCCCCeEEEECCCCCCHHHHHH---------------------------
Confidence 334445555444 44333333333331 1346899999999999999988
Q ss_pred CCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhH
Q psy3848 87 AGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGT 166 (552)
Q Consensus 87 ~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG 166 (552)
++..|++ +|+|+++|+||||.|........... ...+++++++ +.+..++++++.++++++||||||
T Consensus 1390 ------~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~-~~~~si~~~a-----~~l~~ll~~l~~~~v~LvGhSmGG 1456 (1655)
T PLN02980 1390 ------IMKAISG-SARCISIDLPGHGGSKIQNHAKETQT-EPTLSVELVA-----DLLYKLIEHITPGKVTLVGYSMGA 1456 (1655)
T ss_pred ------HHHHHhC-CCEEEEEcCCCCCCCCCccccccccc-cccCCHHHHH-----HHHHHHHHHhCCCCEEEEEECHHH
Confidence 7888876 69999999999999974321000000 0145677766 444455567788899999999999
Q ss_pred HHHHHHHHcCCcchhchheeeecccc
Q psy3848 167 TMFYVLTSQRPEYNEKLLGAISLAPV 192 (552)
Q Consensus 167 ~ial~~a~~~Pe~~~~l~~~I~laP~ 192 (552)
.+++.++.++|++ +.++|++++.
T Consensus 1457 ~iAl~~A~~~P~~---V~~lVlis~~ 1479 (1655)
T PLN02980 1457 RIALYMALRFSDK---IEGAVIISGS 1479 (1655)
T ss_pred HHHHHHHHhChHh---hCEEEEECCC
Confidence 9999999999954 6666776653
No 56
>PRK10566 esterase; Provisional
Probab=99.78 E-value=9.2e-18 Score=165.94 Aligned_cols=116 Identities=22% Similarity=0.245 Sum_probs=80.4
Q ss_pred EEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCce
Q psy3848 24 LEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYD 103 (552)
Q Consensus 24 L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~ 103 (552)
..++++|.+. ++++.|+||++||++++...|.. ++..|+++||+
T Consensus 13 ~~~~~~p~~~---~~~~~p~vv~~HG~~~~~~~~~~---------------------------------~~~~l~~~G~~ 56 (249)
T PRK10566 13 EVLHAFPAGQ---RDTPLPTVFFYHGFTSSKLVYSY---------------------------------FAVALAQAGFR 56 (249)
T ss_pred ceEEEcCCCC---CCCCCCEEEEeCCCCcccchHHH---------------------------------HHHHHHhCCCE
Confidence 3466666532 11356899999999998887776 89999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHH--cCCCcEEEEEechhHHHHHHHHHcCCc
Q psy3848 104 VWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK--TDHTQMIYIGHSMGTTMFYVLTSQRPE 178 (552)
Q Consensus 104 Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~--~g~~ki~lVGHSmGG~ial~~a~~~Pe 178 (552)
|+++|+||+|.|..... ...-..+|.. ..... .|+.+.++++.+. .+.++++++||||||.+++.+++++|+
T Consensus 57 v~~~d~~g~G~~~~~~~-~~~~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~ 130 (249)
T PRK10566 57 VIMPDAPMHGARFSGDE-ARRLNHFWQI-LLQNM-QEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPW 130 (249)
T ss_pred EEEecCCcccccCCCcc-ccchhhHHHH-HHHHH-HHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCC
Confidence 99999999997632110 1011112211 11111 2666777777765 345689999999999999999998885
No 57
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.77 E-value=2.2e-18 Score=164.91 Aligned_cols=78 Identities=29% Similarity=0.503 Sum_probs=63.9
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchh
Q psy3848 102 YDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNE 181 (552)
Q Consensus 102 y~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~ 181 (552)
|+|+++|+||+|.|+.+ |...+.++...|+.++++.++++++.+++++|||||||++++.+|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--- 67 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH----------WDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE--- 67 (230)
T ss_dssp EEEEEEECTTSTTSSSC----------CGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG---
T ss_pred CEEEEEeCCCCCCCCCC----------ccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch---
Confidence 79999999999999853 12334444445677999999999999999999999999999999999996
Q ss_pred chheeeecccc
Q psy3848 182 KLLGAISLAPV 192 (552)
Q Consensus 182 ~l~~~I~laP~ 192 (552)
+|.++|++++.
T Consensus 68 ~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 RVKKLVLISPP 78 (230)
T ss_dssp GEEEEEEESES
T ss_pred hhcCcEEEeee
Confidence 55556777765
No 58
>KOG1838|consensus
Probab=99.75 E-value=1.1e-16 Score=169.49 Aligned_cols=144 Identities=21% Similarity=0.262 Sum_probs=111.3
Q ss_pred CCCceEEEEECCCCcEEEEEEEcCCCCC--CCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccc
Q psy3848 8 GYPAESYIVQTEDGYLLEIHRIPYGRKG--RRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWV 85 (552)
Q Consensus 8 g~p~e~~~V~t~DG~~L~~~~i~~~~~~--~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (552)
.....+.+++++||-.+.+.+....... ...+..|.||++||+.+++..=+.
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YV-------------------------- 143 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYV-------------------------- 143 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHH--------------------------
Confidence 3456788999999999999887433211 123567999999999999987555
Q ss_pred cCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechh
Q psy3848 86 VAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMG 165 (552)
Q Consensus 86 ~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmG 165 (552)
+.++..+.++||+|+++|.||.|.|.-. +|. -|+.-.-. |+.+++++|.+++...+++.+|.|||
T Consensus 144 -----r~lv~~a~~~G~r~VVfN~RG~~g~~Lt---Tpr-----~f~ag~t~--Dl~~~v~~i~~~~P~a~l~avG~S~G 208 (409)
T KOG1838|consen 144 -----RHLVHEAQRKGYRVVVFNHRGLGGSKLT---TPR-----LFTAGWTE--DLREVVNHIKKRYPQAPLFAVGFSMG 208 (409)
T ss_pred -----HHHHHHHHhCCcEEEEECCCCCCCCccC---CCc-----eeecCCHH--HHHHHHHHHHHhCCCCceEEEEecch
Confidence 5789999999999999999999988632 222 12332222 88899999999999999999999999
Q ss_pred HHHHHHHHHcCCcchhchheeeeccccc
Q psy3848 166 TTMFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 166 G~ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
|+|...|..+..+. ..+.++++++...
T Consensus 209 g~iL~nYLGE~g~~-~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 209 GNILTNYLGEEGDN-TPLIAAVAVCNPW 235 (409)
T ss_pred HHHHHHHhhhccCC-CCceeEEEEeccc
Confidence 99999999987654 3677766666433
No 59
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.73 E-value=4.8e-16 Score=170.96 Aligned_cols=116 Identities=9% Similarity=0.087 Sum_probs=97.3
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
..+.|||+++.+-.-..+++. .|++|++++|.++||+|+++||+.-+.+..
T Consensus 213 v~~~PLLIVPp~INK~YIlDL----------------------------~P~~SlVr~lv~qG~~VflIsW~nP~~~~r- 263 (560)
T TIGR01839 213 QHARPLLVVPPQINKFYIFDL----------------------------SPEKSFVQYCLKNQLQVFIISWRNPDKAHR- 263 (560)
T ss_pred cCCCcEEEechhhhhhheeec----------------------------CCcchHHHHHHHcCCeEEEEeCCCCChhhc-
Confidence 467899999999877777765 788999999999999999999995443321
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHH----HHHcCCcchhchheeeecccccc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYV----LTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~----~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
++++++++. .+.++|+.|++.+|.++++++||||||+++.. +++++++ ++|.+++++++..+
T Consensus 264 -----------~~~ldDYv~-~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~--~~V~sltllatplD 329 (560)
T TIGR01839 264 -----------EWGLSTYVD-ALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQL--RKVNSLTYLVSLLD 329 (560)
T ss_pred -----------CCCHHHHHH-HHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCC--CceeeEEeeecccc
Confidence 678999996 99999999999999999999999999999997 7888874 25777787777666
Q ss_pred ccC
Q psy3848 195 LSR 197 (552)
Q Consensus 195 ~~~ 197 (552)
...
T Consensus 330 f~~ 332 (560)
T TIGR01839 330 STM 332 (560)
T ss_pred cCC
Confidence 543
No 60
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.73 E-value=2.8e-16 Score=168.12 Aligned_cols=68 Identities=15% Similarity=0.058 Sum_probs=57.1
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCC-ccceEEEeCC-CCcccccccccchHHHHHHHHHHHHh
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNP-VGLFKVNFTY-FNHLDFLWAKDVKALVYNDLLLVLKT 449 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~-~~~~~v~~~~-~gH~~~l~~~~~~~~V~~~il~fL~~ 449 (552)
.|++|++|+|+|+|++|.++|++.++++.+.+|+. ....++++++ +||+.++ +.++++.+.|.+||++
T Consensus 318 ~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l---e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 318 ALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV---FDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh---cCHHHHHHHHHHHHcc
Confidence 67889999999999999999999999999999741 1124677885 9999886 6788899999999964
No 61
>KOG2382|consensus
Probab=99.68 E-value=1.5e-15 Score=156.18 Aligned_cols=110 Identities=25% Similarity=0.395 Sum_probs=91.6
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhC-CceEEEEcCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADK-GYDVWLGNARGNTYSRS 117 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~-Gy~Via~D~RG~G~S~~ 117 (552)
.+.|+++++||+.|+...|.. ++..|+++ |-+|++.|.|-||.|..
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~s---------------------------------v~k~Ls~~l~~~v~~vd~RnHG~Sp~ 96 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRS---------------------------------VAKNLSRKLGRDVYAVDVRNHGSSPK 96 (315)
T ss_pred CCCCceEEecccccCCCCHHH---------------------------------HHHHhcccccCceEEEecccCCCCcc
Confidence 578999999999999999998 88889876 68999999999998864
Q ss_pred CCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhH-HHHHHHHHcCCcchhchheeeeccccc
Q psy3848 118 HISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGT-TMFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 118 ~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG-~ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
-. ..+.+.++. |+..+|+.+...+...+++++|||||| .++++++...|+..+++.. +-++|..
T Consensus 97 ~~----------~h~~~~ma~-dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv-~D~sP~~ 161 (315)
T KOG2382|consen 97 IT----------VHNYEAMAE-DVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIV-EDISPGG 161 (315)
T ss_pred cc----------ccCHHHHHH-HHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEE-EecCCcc
Confidence 32 345788887 888888887766678899999999999 8888888889988777644 5677763
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.66 E-value=8.3e-16 Score=138.50 Aligned_cols=92 Identities=33% Similarity=0.430 Sum_probs=73.5
Q ss_pred EEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCC
Q psy3848 43 VVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYS 122 (552)
Q Consensus 43 ~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~s 122 (552)
+||++||.+++...|.. +++.|+++||.|+++|+||+|.+...
T Consensus 1 ~vv~~HG~~~~~~~~~~---------------------------------~~~~l~~~G~~v~~~~~~~~~~~~~~---- 43 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQP---------------------------------LAEALAEQGYAVVAFDYPGHGDSDGA---- 43 (145)
T ss_dssp EEEEECTTTTTTHHHHH---------------------------------HHHHHHHTTEEEEEESCTTSTTSHHS----
T ss_pred CEEEECCCCCCHHHHHH---------------------------------HHHHHHHCCCEEEEEecCCCCccchh----
Confidence 69999999999888877 99999999999999999999876310
Q ss_pred CCcccccccChhhhhhccHHHHHHHHHH-HcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 123 PMDLAFWDFSFHEMGYFDLPAEIDFILN-KTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 123 p~~~~~~~~s~~~~~~~Dl~a~I~~I~~-~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
. ++.+.++.+.. ..+..+++++||||||.+++.++.+.+ ++.++|+++|
T Consensus 44 -----------~-----~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~----~v~~~v~~~~ 93 (145)
T PF12695_consen 44 -----------D-----AVERVLADIRAGYPDPDRIILIGHSMGGAIAANLAARNP----RVKAVVLLSP 93 (145)
T ss_dssp -----------H-----HHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHHHHST----TESEEEEESE
T ss_pred -----------H-----HHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHhhhcc----ceeEEEEecC
Confidence 1 33344554422 346789999999999999999998764 5777788887
No 63
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.66 E-value=2.9e-15 Score=158.04 Aligned_cols=287 Identities=17% Similarity=0.100 Sum_probs=179.9
Q ss_pred CCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCC
Q psy3848 38 SGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRS 117 (552)
Q Consensus 38 ~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~ 117 (552)
+.-+.||+++|-....-..|.. .|+++++..|.+.|++|+..++++=.++..
T Consensus 104 ~v~~~PlLiVpP~iNk~yi~Dl----------------------------~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~ 155 (445)
T COG3243 104 KVLKRPLLIVPPWINKFYILDL----------------------------SPEKSLVRWLLEQGLDVFVISWRNPDASLA 155 (445)
T ss_pred ccCCCceEeeccccCceeEEeC----------------------------CCCccHHHHHHHcCCceEEEeccCchHhhh
Confidence 3467899999999888888877 788899999999999999999984333321
Q ss_pred CCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccccccC
Q psy3848 118 HISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSR 197 (552)
Q Consensus 118 ~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~~~ 197 (552)
..+++++...++..+|+.+++.+|.+++.++|+|+||++++.+++.++.+ +|.+++.+....++..
T Consensus 156 ------------~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k--~I~S~T~lts~~DF~~ 221 (445)
T COG3243 156 ------------AKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK--RIKSLTLLTSPVDFSH 221 (445)
T ss_pred ------------hccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc--ccccceeeecchhhcc
Confidence 35689999779999999999999999999999999999999999998854 5888777766555443
Q ss_pred CCchhhhhhhhhhhHHHHHHHhcCccccchhhhHHHHHHHHHhhhhhhhhhhHHHHH-HHhCCCCccccccchHHHhccC
Q psy3848 198 TRSPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCEDFLF-ILCGHDPYQFKMSLLPVILGHT 276 (552)
Q Consensus 198 ~~~pl~~l~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~~~~~~~~ 276 (552)
.. ++...... ..++.++.-+....+++...+...+.-.... ......+.. +..|..+-.++ .+.....
T Consensus 222 ~g-~l~if~n~-~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpn-----dliw~~fV~nyl~ge~pl~fd--llyWn~d-- 290 (445)
T COG3243 222 AG-DLGIFANE-ATIEALDADIVQKGILPGWYMAIVFFLLRPN-----DLIWNYFVNNYLDGEQPLPFD--LLYWNAD-- 290 (445)
T ss_pred cc-ccccccCH-HHHHHHHhhhhhccCCChHHHHHHHHhcCcc-----ccchHHHHHHhcCCCCCCchh--HHHhhCC--
Confidence 22 11111111 1133333333333355544433222111000 001111111 11222221111 1111111
Q ss_pred CCCcchhhHHH--HH-hhhccccccccccCcccccccccCCCCCCccccccccceeeeccccccchhhhHHHhhcccchh
Q psy3848 277 PAGGSTRTLVH--FA-QFIDSGKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQVTIRLGLVDLF 353 (552)
Q Consensus 277 ~~~~s~~~~~~--~~-q~~~~~~f~~~d~~~~~n~~~y~~~~p~~~~~~~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 353 (552)
+.......| ++ +++..+.+.
T Consensus 291 --st~~~~~~~~~~Lrn~y~~N~l~------------------------------------------------------- 313 (445)
T COG3243 291 --STRLPGAAHSEYLRNFYLENRLI------------------------------------------------------- 313 (445)
T ss_pred --CccCchHHHHHHHHHHHHhChhh-------------------------------------------------------
Confidence 111111111 11 111111111
Q ss_pred hhhhccccccccccccccCCCCCCCCCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCccccccc-
Q psy3848 354 RKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWA- 432 (552)
Q Consensus 354 ~~f~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~- 432 (552)
.+..-.+.+.. +|.+|+||++++.|++|+++|.+++....+.+++.. ...+-+.||+.-+.+
T Consensus 314 -----------~g~~~v~G~~V---dL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~---~f~l~~sGHIa~vVN~ 376 (445)
T COG3243 314 -----------RGGLEVSGTMV---DLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEV---TFVLSRSGHIAGVVNP 376 (445)
T ss_pred -----------ccceEECCEEe---chhhcccceEEEeecccccCCHHHHHHHHHhcCCce---EEEEecCceEEEEeCC
Confidence 11122222223 999999999999999999999999999999999944 556788999999998
Q ss_pred -ccchHHHHH----HHHHHHHhhc
Q psy3848 433 -KDVKALVYN----DLLLVLKTFS 451 (552)
Q Consensus 433 -~~~~~~V~~----~il~fL~~~~ 451 (552)
.+.+...|. ++..||.+..
T Consensus 377 p~~~k~~~w~n~~~~~~~Wl~~a~ 400 (445)
T COG3243 377 PGNAKYQYWTNLPADAEAWLSGAK 400 (445)
T ss_pred cchhhhhcCCCCcchHHHHHHhhc
Confidence 566666777 8888887654
No 64
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.66 E-value=4.2e-15 Score=167.84 Aligned_cols=256 Identities=18% Similarity=0.125 Sum_probs=162.9
Q ss_pred cccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCC-CcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCc
Q psy3848 5 RRHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGK-KEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSAD 83 (552)
Q Consensus 5 ~~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~-~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (552)
+....+.|...+++.||..+..+.+.+.... .++ -|.||++||.+.....|..
T Consensus 359 ~~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~--~~k~yP~i~~~hGGP~~~~~~~~------------------------ 412 (620)
T COG1506 359 KVKLAEPEPVTYKSNDGETIHGWLYKPPGFD--PRKKYPLIVYIHGGPSAQVGYSF------------------------ 412 (620)
T ss_pred ccccCCceEEEEEcCCCCEEEEEEecCCCCC--CCCCCCEEEEeCCCCcccccccc------------------------
Confidence 4556688999999999999988887654211 122 3899999999866665444
Q ss_pred cccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC-C--CcEEEE
Q psy3848 84 WVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD-H--TQMIYI 160 (552)
Q Consensus 84 ~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g-~--~ki~lV 160 (552)
.-..+.|+.+||.|+.+|.||.+.-...-. ..... ++...++. |+.+.++++ .+.+ + +++.+.
T Consensus 413 -------~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~-~~~~~---~~g~~~~~--D~~~~~~~l-~~~~~~d~~ri~i~ 478 (620)
T COG1506 413 -------NPEIQVLASAGYAVLAPNYRGSTGYGREFA-DAIRG---DWGGVDLE--DLIAAVDAL-VKLPLVDPERIGIT 478 (620)
T ss_pred -------chhhHHHhcCCeEEEEeCCCCCCccHHHHH-Hhhhh---ccCCccHH--HHHHHHHHH-HhCCCcChHHeEEe
Confidence 126778999999999999997542110000 00000 11122222 777888844 4444 3 389999
Q ss_pred EechhHHHHHHHHHcCCcchhchheeeeccccccccCCCchhhhhhhhhhhHHHHHHHhcCccccchhhhHHHHHHHHHh
Q psy3848 161 GHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSRTRSPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACE 240 (552)
Q Consensus 161 GHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~~~~~~pl~~l~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~ 240 (552)
|||.||.|++..+...| .+.+++++++..+....... .-..+
T Consensus 479 G~SyGGymtl~~~~~~~----~f~a~~~~~~~~~~~~~~~~--~~~~~-------------------------------- 520 (620)
T COG1506 479 GGSYGGYMTLLAATKTP----RFKAAVAVAGGVDWLLYFGE--STEGL-------------------------------- 520 (620)
T ss_pred ccChHHHHHHHHHhcCc----hhheEEeccCcchhhhhccc--cchhh--------------------------------
Confidence 99999999999999887 35666666665543110000 00000
Q ss_pred hhhhhhhhhHHHHHHHhCCCCccccccchHHHhccCCCCcchhhHHHHHhhhccccccccccCcccccccccCCCCCCcc
Q psy3848 241 LNHMEMKRCEDFLFILCGHDPYQFKMSLLPVILGHTPAGGSTRTLVHFAQFIDSGKFRQFDYGKDENLHIYNSTFPPKYD 320 (552)
Q Consensus 241 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~q~~~~~~f~~~d~~~~~n~~~y~~~~p~~~~ 320 (552)
+....... + .+. . +...|...
T Consensus 521 --------~~~~~~~~-~-~~~------------------------------------------~-~~~~~~~~------ 541 (620)
T COG1506 521 --------RFDPEENG-G-GPP------------------------------------------E-DREKYEDR------ 541 (620)
T ss_pred --------cCCHHHhC-C-Ccc------------------------------------------c-ChHHHHhc------
Confidence 00000000 0 000 0 00011111
Q ss_pred ccccccceeeeccccccchhhhHHHhhcccchhhhhhccccccccccccccCCCCCCCCCCCccccEEEEEeCCCCCCCH
Q psy3848 321 LKFISTKVAFFYADNDLLTNEQVTIRLGLVDLFRKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNE 400 (552)
Q Consensus 321 ~~~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PvLii~G~~D~i~p~ 400 (552)
.|-....+|++|+|+|||++|..|+.
T Consensus 542 ------------------------------------------------------sp~~~~~~i~~P~LliHG~~D~~v~~ 567 (620)
T COG1506 542 ------------------------------------------------------SPIFYADNIKTPLLLIHGEEDDRVPI 567 (620)
T ss_pred ------------------------------------------------------ChhhhhcccCCCEEEEeecCCccCCh
Confidence 11125778999999999999999999
Q ss_pred HHHHHHHHhCC-CCccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhccc
Q psy3848 401 QDVKELYTLLP-NPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKT 453 (552)
Q Consensus 401 ~~~~~l~~~lp-~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~~~ 453 (552)
+.++.++++|. +...++++.+|+.||-- ...+....++..+++|++++.+.
T Consensus 568 ~q~~~~~~aL~~~g~~~~~~~~p~e~H~~--~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 568 EQAEQLVDALKRKGKPVELVVFPDEGHGF--SRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred HHHHHHHHHHHHcCceEEEEEeCCCCcCC--CCchhHHHHHHHHHHHHHHHhcC
Confidence 99999999887 35556789999999963 33566778999999999998754
No 65
>PRK11071 esterase YqiA; Provisional
Probab=99.64 E-value=4.5e-15 Score=143.69 Aligned_cols=91 Identities=15% Similarity=0.141 Sum_probs=72.1
Q ss_pred cEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhC--CceEEEEcCCCCCCCCCCC
Q psy3848 42 EVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADK--GYDVWLGNARGNTYSRSHI 119 (552)
Q Consensus 42 ~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~--Gy~Via~D~RG~G~S~~~~ 119 (552)
|+|||+||++++...|.. +.+...|++. +|+|+++|+||+|
T Consensus 2 p~illlHGf~ss~~~~~~-------------------------------~~~~~~l~~~~~~~~v~~~dl~g~~------ 44 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKA-------------------------------TLLKNWLAQHHPDIEMIVPQLPPYP------ 44 (190)
T ss_pred CeEEEECCCCCCcchHHH-------------------------------HHHHHHHHHhCCCCeEEeCCCCCCH------
Confidence 589999999999999985 2356667653 7999999999874
Q ss_pred CCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 120 SYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 120 ~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
+ ++.+.++.++++++.++++++||||||.+++.+|.++|. + +|+++|...
T Consensus 45 --------------~-----~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~---~vl~~~~~~ 94 (190)
T PRK11071 45 --------------A-----DAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---P---AVVVNPAVR 94 (190)
T ss_pred --------------H-----HHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---C---EEEECCCCC
Confidence 1 233666777778888899999999999999999999882 2 367777543
No 66
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.64 E-value=2e-15 Score=153.89 Aligned_cols=134 Identities=14% Similarity=0.157 Sum_probs=99.3
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHH
Q psy3848 13 SYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTA 92 (552)
Q Consensus 13 ~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 92 (552)
...+.+.+|.....++.+.+. +.+++|||+||+++....|.. .| ..
T Consensus 2 ~~~l~~~~g~~~~~~~~p~~~-----~~~~~VlllHG~g~~~~~~~~-----------------------~~------~~ 47 (266)
T TIGR03101 2 PFFLDAPHGFRFCLYHPPVAV-----GPRGVVIYLPPFAEEMNKSRR-----------------------MV------AL 47 (266)
T ss_pred CEEecCCCCcEEEEEecCCCC-----CCceEEEEECCCcccccchhH-----------------------HH------HH
Confidence 356777888766555544432 346889999999875443322 00 12
Q ss_pred HHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHH
Q psy3848 93 LAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVL 172 (552)
Q Consensus 93 la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~ 172 (552)
+++.|+++||.|+++|+||||.|.+... ..+++.+.. |+.+.++++.+ .+..+++++||||||.+++.+
T Consensus 48 la~~La~~Gy~Vl~~Dl~G~G~S~g~~~---------~~~~~~~~~-Dv~~ai~~L~~-~~~~~v~LvG~SmGG~vAl~~ 116 (266)
T TIGR03101 48 QARAFAAGGFGVLQIDLYGCGDSAGDFA---------AARWDVWKE-DVAAAYRWLIE-QGHPPVTLWGLRLGALLALDA 116 (266)
T ss_pred HHHHHHHCCCEEEEECCCCCCCCCCccc---------cCCHHHHHH-HHHHHHHHHHh-cCCCCEEEEEECHHHHHHHHH
Confidence 7889999999999999999999974321 245667775 88888887765 477899999999999999999
Q ss_pred HHcCCcchhchheeeecccccc
Q psy3848 173 TSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 173 a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
+.++|+ .+.++|+++|+..
T Consensus 117 A~~~p~---~v~~lVL~~P~~~ 135 (266)
T TIGR03101 117 ANPLAA---KCNRLVLWQPVVS 135 (266)
T ss_pred HHhCcc---ccceEEEeccccc
Confidence 999984 5666788888654
No 67
>KOG1552|consensus
Probab=99.62 E-value=1.1e-14 Score=145.59 Aligned_cols=129 Identities=19% Similarity=0.190 Sum_probs=97.5
Q ss_pred CceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCC
Q psy3848 10 PAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGP 89 (552)
Q Consensus 10 p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 89 (552)
.++...++|.-|..+...++.+.. ...+.||+.||-.........
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~-----~~~~~lly~hGNa~Dlgq~~~------------------------------ 78 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE-----AAHPTLLYSHGNAADLGQMVE------------------------------ 78 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc-----ccceEEEEcCCcccchHHHHH------------------------------
Confidence 667788999999888766665542 346899999997444443222
Q ss_pred cHHHHHHHHh-CCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC-CCcEEEEEechhHH
Q psy3848 90 DTALAYLLAD-KGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD-HTQMIYIGHSMGTT 167 (552)
Q Consensus 90 ~~~la~~La~-~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g-~~ki~lVGHSmGG~ 167 (552)
+...|+. -++.|+.+|++|+|.|.+.. .. ...++ |+.+..+.+++..| .++++++|+|||+.
T Consensus 79 ---~~~~l~~~ln~nv~~~DYSGyG~S~G~p----sE-------~n~y~--Di~avye~Lr~~~g~~~~Iil~G~SiGt~ 142 (258)
T KOG1552|consen 79 ---LFKELSIFLNCNVVSYDYSGYGRSSGKP----SE-------RNLYA--DIKAVYEWLRNRYGSPERIILYGQSIGTV 142 (258)
T ss_pred ---HHHHHhhcccceEEEEecccccccCCCc----cc-------ccchh--hHHHHHHHHHhhcCCCceEEEEEecCCch
Confidence 3333444 37999999999999998633 21 12223 99999999999995 78999999999999
Q ss_pred HHHHHHHcCCcchhchheeeecccccc
Q psy3848 168 MFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 168 ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
.++.+|++.| +.++|+.+|...
T Consensus 143 ~tv~Lasr~~-----~~alVL~SPf~S 164 (258)
T KOG1552|consen 143 PTVDLASRYP-----LAAVVLHSPFTS 164 (258)
T ss_pred hhhhHhhcCC-----cceEEEeccchh
Confidence 9999999987 788888888664
No 68
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.62 E-value=3.9e-14 Score=151.66 Aligned_cols=84 Identities=12% Similarity=0.058 Sum_probs=69.6
Q ss_pred cccccccccCCCCCCCCCCCcc-ccEEEEEeCCCCCCCHHHHHHHHHhC---CCCccceEEEeCCCCcccccccccchHH
Q psy3848 363 KDENLHIYNSTFPPKYDLKFIS-TKVAFFYADNDLLTNEQDVKELYTLL---PNPVGLFKVNFTYFNHLDFLWAKDVKAL 438 (552)
Q Consensus 363 ~~~~~~~~~~~~~~~~~l~~I~-~PvLii~G~~D~i~p~~~~~~l~~~l---p~~~~~~~v~~~~~gH~~~l~~~~~~~~ 438 (552)
+..|+....++.. ++++|+ +|+|.+.|++|.|+|++.++.+.+.+ |+.. +.....+++||++++.|...+++
T Consensus 319 L~~G~l~v~G~~V---dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~-k~~~~~~~~GH~Gvf~G~r~~~~ 394 (406)
T TIGR01849 319 LPQGKFIVEGKRV---DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDM-KRHHLQPGVGHYGVFSGSRFREE 394 (406)
T ss_pred ccCCcEEECCEEe---cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhh-ceEeecCCCCeEEEeeChhhhhh
Confidence 3445555555555 999999 99999999999999999999988874 6544 34556779999999999999999
Q ss_pred HHHHHHHHHHhh
Q psy3848 439 VYNDLLLVLKTF 450 (552)
Q Consensus 439 V~~~il~fL~~~ 450 (552)
+|+.|.+||.++
T Consensus 395 i~P~i~~wl~~~ 406 (406)
T TIGR01849 395 IYPLVREFIRRN 406 (406)
T ss_pred hchHHHHHHHhC
Confidence 999999999763
No 69
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.61 E-value=5.9e-15 Score=144.89 Aligned_cols=134 Identities=22% Similarity=0.264 Sum_probs=99.1
Q ss_pred EEEECCCCcEEEEEEEcCCCCCCCCCCCc-EEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHH
Q psy3848 14 YIVQTEDGYLLEIHRIPYGRKGRRSGKKE-VVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTA 92 (552)
Q Consensus 14 ~~V~t~DG~~L~~~~i~~~~~~~~~g~~~-~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 92 (552)
..+...||+.|...+++.. ++-+ -|++--+++.....+..
T Consensus 8 ~~l~~~DG~~l~~~~~pA~------~~~~g~~~va~a~Gv~~~fYRr--------------------------------- 48 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPAD------GKASGRLVVAGATGVGQYFYRR--------------------------------- 48 (281)
T ss_pred cccccCCCccCccccccCC------CCCCCcEEecccCCcchhHhHH---------------------------------
Confidence 3478899999999999865 3333 34444444444455555
Q ss_pred HHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHH
Q psy3848 93 LAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVL 172 (552)
Q Consensus 93 la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~ 172 (552)
+|..++.+||.|.++|+||.|.|+.... +. . .+.+.|+++.|+++.|+.++......+.+.|||||||.+.- +
T Consensus 49 fA~~a~~~Gf~Vlt~dyRG~g~S~p~~~-~~--~---~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g-L 121 (281)
T COG4757 49 FAAAAAKAGFEVLTFDYRGIGQSRPASL-SG--S---QWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALG-L 121 (281)
T ss_pred HHHHhhccCceEEEEecccccCCCcccc-cc--C---ccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeec-c
Confidence 9999999999999999999999985332 21 1 57899999999999999999988888999999999998754 4
Q ss_pred HHcCCcchhchheeeeccccccccC
Q psy3848 173 TSQRPEYNEKLLGAISLAPVAYLSR 197 (552)
Q Consensus 173 a~~~Pe~~~~l~~~I~laP~~~~~~ 197 (552)
+.+++ ++.++...+..+..+.
T Consensus 122 ~~~~~----k~~a~~vfG~gagwsg 142 (281)
T COG4757 122 LGQHP----KYAAFAVFGSGAGWSG 142 (281)
T ss_pred cccCc----ccceeeEecccccccc
Confidence 44555 4555545555554443
No 70
>KOG4391|consensus
Probab=99.60 E-value=1.2e-14 Score=141.34 Aligned_cols=132 Identities=19% Similarity=0.312 Sum_probs=102.4
Q ss_pred cccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCcc
Q psy3848 5 RRHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADW 84 (552)
Q Consensus 5 ~~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (552)
..++.|.|...++|.|...|..+.+... .+.|+|+..||=.|+-.....
T Consensus 48 ~~~n~pye~i~l~T~D~vtL~a~~~~~E------~S~pTlLyfh~NAGNmGhr~~------------------------- 96 (300)
T KOG4391|consen 48 KEFNMPYERIELRTRDKVTLDAYLMLSE------SSRPTLLYFHANAGNMGHRLP------------------------- 96 (300)
T ss_pred cccCCCceEEEEEcCcceeEeeeeeccc------CCCceEEEEccCCCcccchhh-------------------------
Confidence 4678899999999999999999888743 478999999998888766555
Q ss_pred ccCCCcHHHHHH-HHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC--CCcEEEEE
Q psy3848 85 VVAGPDTALAYL-LADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD--HTQMIYIG 161 (552)
Q Consensus 85 ~~~~p~~~la~~-La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g--~~ki~lVG 161 (552)
.+.. ...-+..|+.+++||+|.|.+ +|..+ .+ ..|..+.++++...-. ..|+++.|
T Consensus 97 --------i~~~fy~~l~mnv~ivsYRGYG~S~G----spsE~--------GL-~lDs~avldyl~t~~~~dktkivlfG 155 (300)
T KOG4391|consen 97 --------IARVFYVNLKMNVLIVSYRGYGKSEG----SPSEE--------GL-KLDSEAVLDYLMTRPDLDKTKIVLFG 155 (300)
T ss_pred --------HHHHHHHHcCceEEEEEeeccccCCC----Ccccc--------ce-eccHHHHHHHHhcCccCCcceEEEEe
Confidence 3443 334578999999999999986 33322 12 2388899999987644 56899999
Q ss_pred echhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 162 HSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 162 HSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
.|.||.+|..+|+...+ ++.++|+-..
T Consensus 156 rSlGGAvai~lask~~~---ri~~~ivENT 182 (300)
T KOG4391|consen 156 RSLGGAVAIHLASKNSD---RISAIIVENT 182 (300)
T ss_pred cccCCeeEEEeeccchh---heeeeeeech
Confidence 99999999999988774 5666555444
No 71
>PLN00021 chlorophyllase
Probab=99.56 E-value=2.3e-13 Score=141.83 Aligned_cols=106 Identities=21% Similarity=0.249 Sum_probs=76.5
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
+..|+||++||++++...|.. +++.|+++||.|+++|++|++.+..
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~---------------------------------l~~~Las~G~~VvapD~~g~~~~~~- 95 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQ---------------------------------LLQHIASHGFIVVAPQLYTLAGPDG- 95 (313)
T ss_pred CCCCEEEEECCCCCCcccHHH---------------------------------HHHHHHhCCCEEEEecCCCcCCCCc-
Confidence 567999999999998887776 8999999999999999998643211
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHH----------cCCCcEEEEEechhHHHHHHHHHcCCcch--hchhee
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK----------TDHTQMIYIGHSMGTTMFYVLTSQRPEYN--EKLLGA 186 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~----------~g~~ki~lVGHSmGG~ial~~a~~~Pe~~--~~l~~~ 186 (552)
...++ |..+.++++.+. .+.++++++||||||.+++.+|.++++.. .++.++
T Consensus 96 -----------~~~i~-----d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~al 159 (313)
T PLN00021 96 -----------TDEIK-----DAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSAL 159 (313)
T ss_pred -----------hhhHH-----HHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeE
Confidence 01122 222334444332 34468999999999999999999988643 356677
Q ss_pred eecccccc
Q psy3848 187 ISLAPVAY 194 (552)
Q Consensus 187 I~laP~~~ 194 (552)
|++.|+..
T Consensus 160 i~ldPv~g 167 (313)
T PLN00021 160 IGLDPVDG 167 (313)
T ss_pred Eeeccccc
Confidence 77777543
No 72
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.54 E-value=4.4e-13 Score=125.90 Aligned_cols=102 Identities=24% Similarity=0.425 Sum_probs=76.3
Q ss_pred CcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhC--CceEEEEcCCCCCCCCCC
Q psy3848 41 KEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADK--GYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 41 ~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~--Gy~Via~D~RG~G~S~~~ 118 (552)
+++|+++||++++...|.. ....+... .|+|+++|+||||.|.
T Consensus 21 ~~~i~~~hg~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~d~~g~g~s~-- 65 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRP---------------------------------VFKVLPALAARYRVIAPDLRGHGRSD-- 65 (282)
T ss_pred CCeEEEeCCCCCchhhhHH---------------------------------HHHHhhccccceEEEEecccCCCCCC--
Confidence 5599999999999998877 22222221 1999999999999997
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
. . .++...+ .+.+..+.+.++..+++++||||||.+++.++.++|+ ++.+++++++...
T Consensus 66 ~--~-------~~~~~~~-----~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~---~~~~~v~~~~~~~ 124 (282)
T COG0596 66 P--A-------GYSLSAY-----ADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPD---RVRGLVLIGPAPP 124 (282)
T ss_pred c--c-------cccHHHH-----HHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcch---hhheeeEecCCCC
Confidence 1 0 0122222 3666777778998889999999999999999999996 5666677776543
No 73
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.53 E-value=6e-14 Score=136.42 Aligned_cols=69 Identities=17% Similarity=0.143 Sum_probs=54.7
Q ss_pred ccccEEEEEeCCCCCCCHHHHHHHHHhCCC-CccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhccc
Q psy3848 383 ISTKVAFFYADNDLLTNEQDVKELYTLLPN-PVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKT 453 (552)
Q Consensus 383 I~~PvLii~G~~D~i~p~~~~~~l~~~lp~-~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~~~ 453 (552)
+++|+|+++|++|.+||++.+..++++|.. .....++.+|+.||. ....+...+++..+++||+++.+.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~--~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHG--FGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSS--TTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCC--CCCchhHHHHHHHHHHHHHHHcCC
Confidence 789999999999999999999998888753 233568889999993 233456668999999999988753
No 74
>KOG2984|consensus
Probab=99.52 E-value=1.5e-13 Score=132.73 Aligned_cols=65 Identities=14% Similarity=-0.038 Sum_probs=58.1
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHh
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 449 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~ 449 (552)
.|++|+||+||++|+.|++|+...+-.+....+.++ +.+.|..+|--++ +-+++++..+++||++
T Consensus 211 ~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~---~~~~peGkHn~hL---rya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 211 VLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAK---VEIHPEGKHNFHL---RYAKEFNKLVLDFLKS 275 (277)
T ss_pred hcccccCCeeEeeCCcCCCCCCCCccchhhhcccce---EEEccCCCcceee---echHHHHHHHHHHHhc
Confidence 789999999999999999999999999999998887 7779999997665 6778899999999975
No 75
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.51 E-value=8.1e-13 Score=138.09 Aligned_cols=146 Identities=20% Similarity=0.247 Sum_probs=91.6
Q ss_pred EEECCCCcEEEEEEEcCCCCCC-CCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccC-CCcHH
Q psy3848 15 IVQTEDGYLLEIHRIPYGRKGR-RSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVA-GPDTA 92 (552)
Q Consensus 15 ~V~t~DG~~L~~~~i~~~~~~~-~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~ 92 (552)
.++++-|..|.-.++.+...|. +.....+||++||+.++++.-..+..+ .+--|... .|.+.
T Consensus 24 ~l~le~G~~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~----------------~~GWW~~liGpG~~ 87 (368)
T COG2021 24 PLTLESGGVLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDG----------------EKGWWDDLIGPGKP 87 (368)
T ss_pred ceeecCCCcccCcEEEEEecccccccCCceEEEeccccCcccccccCCCC----------------CCccHHHhcCCCCC
Confidence 3556666555433333222111 113457899999999987654431100 00011111 22211
Q ss_pred HHHHHHhCCceEEEEcCCCCC-CCCCCCCCCCC----cccccccChhhhhhccHHHHHHHHHHHcCCCcEE-EEEechhH
Q psy3848 93 LAYLLADKGYDVWLGNARGNT-YSRSHISYSPM----DLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMI-YIGHSMGT 166 (552)
Q Consensus 93 la~~La~~Gy~Via~D~RG~G-~S~~~~~~sp~----~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~-lVGHSmGG 166 (552)
+.-..|-|++.|..|.+ .|.++.+..|. ..+|-.+|+.|++. +-..+++++|++++. +||-||||
T Consensus 88 ----iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~-----aq~~ll~~LGI~~l~avvGgSmGG 158 (368)
T COG2021 88 ----IDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVR-----AQRLLLDALGIKKLAAVVGGSMGG 158 (368)
T ss_pred ----CCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHH-----HHHHHHHhcCcceEeeeeccChHH
Confidence 22234999999999988 56665544444 12344577777774 446788999999987 89999999
Q ss_pred HHHHHHHHcCCcchhchhe
Q psy3848 167 TMFYVLTSQRPEYNEKLLG 185 (552)
Q Consensus 167 ~ial~~a~~~Pe~~~~l~~ 185 (552)
+.++..+..+||++++++.
T Consensus 159 MqaleWa~~yPd~V~~~i~ 177 (368)
T COG2021 159 MQALEWAIRYPDRVRRAIP 177 (368)
T ss_pred HHHHHHHHhChHHHhhhhe
Confidence 9999999999988777644
No 76
>PRK11460 putative hydrolase; Provisional
Probab=99.49 E-value=7.6e-13 Score=131.84 Aligned_cols=70 Identities=13% Similarity=-0.001 Sum_probs=50.8
Q ss_pred cccEEEEEeCCCCCCCHHHHHHHHHhCCCC-ccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhcccccccccc
Q psy3848 384 STKVAFFYADNDLLTNEQDVKELYTLLPNP-VGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKTRARSEVL 460 (552)
Q Consensus 384 ~~PvLii~G~~D~i~p~~~~~~l~~~lp~~-~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~~~~~~~~~~ 460 (552)
.+|++++||++|.++|++.++.+.+.+... .....+.+++.||.- ..+...++.+||++.-..+-=+|.+
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i-------~~~~~~~~~~~l~~~l~~~~~~~~~ 218 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI-------DPRLMQFALDRLRYTVPKRYWDEAL 218 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC-------CHHHHHHHHHHHHHHcchhhHHHHh
Confidence 579999999999999999999888877532 223467789999962 2456778888887766444334433
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.49 E-value=5.4e-12 Score=128.44 Aligned_cols=119 Identities=15% Similarity=0.241 Sum_probs=73.7
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcC--CCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNA--RGNTYSR 116 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~--RG~G~S~ 116 (552)
++.|+|+|+||++++...|.. . ..+...+++.||.|+++|. ||+|.+.
T Consensus 40 ~~~P~vvllHG~~~~~~~~~~---------------------------~---~~~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTHENFMI---------------------------K---AGAQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred CCCCEEEEccCCCCCccHHHh---------------------------h---hHHHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 357899999999999988865 1 0123344557999999998 6665433
Q ss_pred CCCCCCC--Cccccc---------ccChhhhhhccHHHHHHHHHHH---cCCCcEEEEEechhHHHHHHHHHcCCcchhc
Q psy3848 117 SHISYSP--MDLAFW---------DFSFHEMGYFDLPAEIDFILNK---TDHTQMIYIGHSMGTTMFYVLTSQRPEYNEK 182 (552)
Q Consensus 117 ~~~~~sp--~~~~~~---------~~s~~~~~~~Dl~a~I~~I~~~---~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~ 182 (552)
....-.. ...-|+ .+.+.++. .+++..++++ ++.++++++||||||.+++.++.++|+.
T Consensus 90 ~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~--- 162 (275)
T TIGR02821 90 EDDAWDFGKGAGFYVDATEEPWSQHYRMYSYI----VQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDR--- 162 (275)
T ss_pred CcccccccCCccccccCCcCcccccchHHHHH----HHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCccc---
Confidence 1100000 000000 11222222 2333333333 4556899999999999999999999964
Q ss_pred hheeeecccccc
Q psy3848 183 LLGAISLAPVAY 194 (552)
Q Consensus 183 l~~~I~laP~~~ 194 (552)
+.++++++|...
T Consensus 163 ~~~~~~~~~~~~ 174 (275)
T TIGR02821 163 FKSVSAFAPIVA 174 (275)
T ss_pred ceEEEEECCccC
Confidence 566677777754
No 78
>PLN02442 S-formylglutathione hydrolase
Probab=99.47 E-value=8.7e-12 Score=127.81 Aligned_cols=123 Identities=17% Similarity=0.276 Sum_probs=80.7
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCC----
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTY---- 114 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~---- 114 (552)
.+.|+|+|+||++++...|.. . ..+.+.++..|+.|+.+|..++|.
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~---------------------------~---~~~~~~~~~~g~~Vv~pd~~~~g~~~~~ 94 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQ---------------------------K---SGAQRAAAARGIALVAPDTSPRGLNVEG 94 (283)
T ss_pred CCCCEEEEecCCCcChHHHHH---------------------------h---hhHHHHHhhcCeEEEecCCCCCCCCCCC
Confidence 457999999999998887755 1 124566778899999999887662
Q ss_pred -CCCC----C-C-CCCCccccc-ccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchhee
Q psy3848 115 -SRSH----I-S-YSPMDLAFW-DFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGA 186 (552)
Q Consensus 115 -S~~~----~-~-~sp~~~~~~-~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~ 186 (552)
+... . + +.......| .+.+.++...++++.++...+..+.++++++||||||.+++.++.++|++ +.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~---~~~~ 171 (283)
T PLN02442 95 EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDK---YKSV 171 (283)
T ss_pred CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchh---EEEE
Confidence 1100 0 0 000000000 01122333335666676666667888999999999999999999999954 5566
Q ss_pred eecccccc
Q psy3848 187 ISLAPVAY 194 (552)
Q Consensus 187 I~laP~~~ 194 (552)
++++|...
T Consensus 172 ~~~~~~~~ 179 (283)
T PLN02442 172 SAFAPIAN 179 (283)
T ss_pred EEECCccC
Confidence 77777654
No 79
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.46 E-value=2e-12 Score=135.24 Aligned_cols=141 Identities=21% Similarity=0.176 Sum_probs=88.0
Q ss_pred CCCceEEEEECCCCcEEEEEEEcCC-CCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCcccc
Q psy3848 8 GYPAESYIVQTEDGYLLEIHRIPYG-RKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVV 86 (552)
Q Consensus 8 g~p~e~~~V~t~DG~~L~~~~i~~~-~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (552)
+..+....+++.+|..+..+...+. .+ ++-|.||..||.++....|..
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~~~----~~~Pavv~~hGyg~~~~~~~~--------------------------- 101 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKNAK----GKLPAVVQFHGYGGRSGDPFD--------------------------- 101 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES-SS----SSEEEEEEE--TT--GGGHHH---------------------------
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCCCC----CCcCEEEEecCCCCCCCCccc---------------------------
Confidence 3445566788889988887765433 22 667899999999998777655
Q ss_pred CCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCC--CCCCCcccccccC---------hhhhhhccHHHHHHHHHHHc--C
Q psy3848 87 AGPDTALAYLLADKGYDVWLGNARGNTYSRSHI--SYSPMDLAFWDFS---------FHEMGYFDLPAEIDFILNKT--D 153 (552)
Q Consensus 87 ~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~--~~sp~~~~~~~~s---------~~~~~~~Dl~a~I~~I~~~~--g 153 (552)
.. .++.+||.|+.+|.||+|...... ...+....+.... +..+. .|...+++++...- +
T Consensus 102 ------~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~-~D~~ravd~l~slpevD 173 (320)
T PF05448_consen 102 ------LL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVY-LDAVRAVDFLRSLPEVD 173 (320)
T ss_dssp ------HH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHH-HHHHHHHHHHHTSTTEE
T ss_pred ------cc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHH-HHHHHHHHHHHhCCCcC
Confidence 22 367789999999999999322111 0011111111111 22233 38888999888653 3
Q ss_pred CCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 154 HTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 154 ~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
.+++.+.|.|+||.+++.+|+..| +|.++++..|
T Consensus 174 ~~rI~v~G~SqGG~lal~~aaLd~----rv~~~~~~vP 207 (320)
T PF05448_consen 174 GKRIGVTGGSQGGGLALAAAALDP----RVKAAAADVP 207 (320)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHSS----T-SEEEEESE
T ss_pred cceEEEEeecCchHHHHHHHHhCc----cccEEEecCC
Confidence 468999999999999999999876 4777666666
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.43 E-value=3.8e-12 Score=124.38 Aligned_cols=117 Identities=18% Similarity=0.150 Sum_probs=79.2
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
++.|+||++||.+++...+.. . ..+...+.+.||.|+++|.+|++.+...
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~---------------------------~---~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~ 60 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVI---------------------------D---WGWKAAADRYGFVLVAPEQTSYNSSNNC 60 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhh---------------------------h---cChHHHHHhCCeEEEecCCcCccccCCC
Confidence 467999999999988877653 0 0145556667999999999998855321
Q ss_pred C-CCCCCcccccccChhhhhhccHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccc
Q psy3848 119 I-SYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDH--TQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 119 ~-~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~--~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
. ...+... .....+ ..|+.+.++++.+..++ ++++++||||||.+++.++.++|+ .+.++++++...
T Consensus 61 ~~~~~~~~~---~~~~~~--~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~~~~~g~~ 130 (212)
T TIGR01840 61 WDWFFTHHR---ARGTGE--VESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPD---VFAGGASNAGLP 130 (212)
T ss_pred CCCCCcccc---CCCCcc--HHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCch---hheEEEeecCCc
Confidence 0 0000000 000111 12677888888877665 489999999999999999999995 455656666543
No 81
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.40 E-value=2.4e-12 Score=125.90 Aligned_cols=70 Identities=17% Similarity=0.164 Sum_probs=47.7
Q ss_pred CCCccccEEEEEeCCCCCCCHHHHHHHHHhC-CCCccceEEEeCCCCcccccccc------cchHHHHHHHHHHHHhh
Q psy3848 380 LKFISTKVAFFYADNDLLTNEQDVKELYTLL-PNPVGLFKVNFTYFNHLDFLWAK------DVKALVYNDLLLVLKTF 450 (552)
Q Consensus 380 l~~I~~PvLii~G~~D~i~p~~~~~~l~~~l-p~~~~~~~v~~~~~gH~~~l~~~------~~~~~V~~~il~fL~~~ 450 (552)
..++++|+++++|++|++++++.++.+.+.+ ........+.+++.+|. |.... .+.++.|+.+++||+++
T Consensus 141 ~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~Hg-F~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 141 APKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHG-FANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp GGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TT-TTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred hcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCccc-ccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 3456899999999999999999988888777 22334468889999994 54332 46678899999999875
No 82
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.36 E-value=1.2e-10 Score=118.22 Aligned_cols=130 Identities=20% Similarity=0.280 Sum_probs=100.0
Q ss_pred EEEECCCCcEEEEEEE--cCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcH
Q psy3848 14 YIVQTEDGYLLEIHRI--PYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDT 91 (552)
Q Consensus 14 ~~V~t~DG~~L~~~~i--~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 91 (552)
+.+++++|..+.+.-. .....+ ....+||=+||.+||..++..
T Consensus 9 ~k~~~~~~~~~~~~a~y~D~~~~g---s~~gTVv~~hGsPGSH~DFkY-------------------------------- 53 (297)
T PF06342_consen 9 VKFQAENGKIVTVQAVYEDSLPSG---SPLGTVVAFHGSPGSHNDFKY-------------------------------- 53 (297)
T ss_pred EEcccccCceEEEEEEEEecCCCC---CCceeEEEecCCCCCccchhh--------------------------------
Confidence 4577888877766432 111110 234489999999999999998
Q ss_pred HHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCC-cEEEEEechhHHHHH
Q psy3848 92 ALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHT-QMIYIGHSMGTTMFY 170 (552)
Q Consensus 92 ~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~-ki~lVGHSmGG~ial 170 (552)
+...|.++|.||+..++||+|.+.++.. . .++-.+-. ..+..+++.++++ +++++|||.||-.|+
T Consensus 54 -i~~~l~~~~iR~I~iN~PGf~~t~~~~~-----~---~~~n~er~-----~~~~~ll~~l~i~~~~i~~gHSrGcenal 119 (297)
T PF06342_consen 54 -IRPPLDEAGIRFIGINYPGFGFTPGYPD-----Q---QYTNEERQ-----NFVNALLDELGIKGKLIFLGHSRGCENAL 119 (297)
T ss_pred -hhhHHHHcCeEEEEeCCCCCCCCCCCcc-----c---ccChHHHH-----HHHHHHHHHcCCCCceEEEEeccchHHHH
Confidence 8899999999999999999999985432 2 34444444 6777888888875 799999999999999
Q ss_pred HHHHcCCcchhchheeeeccccccccC
Q psy3848 171 VLTSQRPEYNEKLLGAISLAPVAYLSR 197 (552)
Q Consensus 171 ~~a~~~Pe~~~~l~~~I~laP~~~~~~ 197 (552)
.+|+.+| +.|+++++|+....+
T Consensus 120 ~la~~~~-----~~g~~lin~~G~r~H 141 (297)
T PF06342_consen 120 QLAVTHP-----LHGLVLINPPGLRPH 141 (297)
T ss_pred HHHhcCc-----cceEEEecCCccccc
Confidence 9999986 678899999776443
No 83
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.36 E-value=1.9e-11 Score=136.30 Aligned_cols=129 Identities=16% Similarity=0.116 Sum_probs=93.4
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCcc---ccccCCcccccccccccccCCCCCCCccccCCCcHH
Q psy3848 16 VQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSAD---WVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTA 92 (552)
Q Consensus 16 V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~---w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 92 (552)
|++.||..|....+.+.. .++.|+||++||++.+... +.. .
T Consensus 1 i~~~DG~~L~~~~~~P~~----~~~~P~Il~~~gyg~~~~~~~~~~~--------------------------------~ 44 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG----GGPVPVILSRTPYGKDAGLRWGLDK--------------------------------T 44 (550)
T ss_pred CcCCCCCEEEEEEEecCC----CCCCCEEEEecCCCCchhhcccccc--------------------------------c
Confidence 468899999876554321 1467899999999876531 211 1
Q ss_pred HHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHc-CCCcEEEEEechhHHHHHH
Q psy3848 93 LAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT-DHTQMIYIGHSMGTTMFYV 171 (552)
Q Consensus 93 la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~-g~~ki~lVGHSmGG~ial~ 171 (552)
.+..|+++||.|+++|+||+|.|.+... .++ ...+. |+.+.|+++..+- ...++.++||||||.+++.
T Consensus 45 ~~~~l~~~Gy~vv~~D~RG~g~S~g~~~---------~~~-~~~~~-D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~ 113 (550)
T TIGR00976 45 EPAWFVAQGYAVVIQDTRGRGASEGEFD---------LLG-SDEAA-DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLL 113 (550)
T ss_pred cHHHHHhCCcEEEEEeccccccCCCceE---------ecC-cccch-HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHH
Confidence 4567888999999999999999985321 122 23333 8889999987652 2358999999999999999
Q ss_pred HHHcCCcchhchheeeecccccc
Q psy3848 172 LTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 172 ~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
+|+.+| .+|++++..++...
T Consensus 114 ~a~~~~---~~l~aiv~~~~~~d 133 (550)
T TIGR00976 114 AAVLQP---PALRAIAPQEGVWD 133 (550)
T ss_pred HhccCC---CceeEEeecCcccc
Confidence 999988 45777777666543
No 84
>KOG4667|consensus
Probab=99.35 E-value=1.9e-11 Score=119.37 Aligned_cols=98 Identities=22% Similarity=0.366 Sum_probs=75.0
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
+..+.|+|+||+-.+...-.. +.+|..|++.||.++.+|++|+|.|.+.
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~-------------------------------~~vA~~~e~~gis~fRfDF~GnGeS~gs 79 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIM-------------------------------KNVAKALEKEGISAFRFDFSGNGESEGS 79 (269)
T ss_pred CCceEEEEeeccccccchHHH-------------------------------HHHHHHHHhcCceEEEEEecCCCCcCCc
Confidence 677899999999888775444 6799999999999999999999999853
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPE 178 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe 178 (552)
-.+. . +...+ +||...+.++.+.. .-=-+++|||=||.+++.+|+.+++
T Consensus 80 f~~G-------n--~~~ea-dDL~sV~q~~s~~n-r~v~vi~gHSkGg~Vvl~ya~K~~d 128 (269)
T KOG4667|consen 80 FYYG-------N--YNTEA-DDLHSVIQYFSNSN-RVVPVILGHSKGGDVVLLYASKYHD 128 (269)
T ss_pred cccC-------c--ccchH-HHHHHHHHHhccCc-eEEEEEEeecCccHHHHHHHHhhcC
Confidence 2111 1 22333 38888888776632 2235789999999999999998875
No 85
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.32 E-value=4.7e-11 Score=127.58 Aligned_cols=137 Identities=18% Similarity=0.207 Sum_probs=89.8
Q ss_pred cccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCcc
Q psy3848 5 RRHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADW 84 (552)
Q Consensus 5 ~~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (552)
+..++++++..|.-+++..-.+.+.|.+. ++.|+||++-|+-+-..++..
T Consensus 159 ~l~~~~i~~v~iP~eg~~I~g~LhlP~~~-----~p~P~VIv~gGlDs~qeD~~~------------------------- 208 (411)
T PF06500_consen 159 KLSDYPIEEVEIPFEGKTIPGYLHLPSGE-----KPYPTVIVCGGLDSLQEDLYR------------------------- 208 (411)
T ss_dssp HHSSSEEEEEEEEETTCEEEEEEEESSSS-----S-EEEEEEE--TTS-GGGGHH-------------------------
T ss_pred HhCCCCcEEEEEeeCCcEEEEEEEcCCCC-----CCCCEEEEeCCcchhHHHHHH-------------------------
Confidence 45688999999999987666666677642 456777777777666666544
Q ss_pred ccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHH--cCCCcEEEEEe
Q psy3848 85 VVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK--TDHTQMIYIGH 162 (552)
Q Consensus 85 ~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~--~g~~ki~lVGH 162 (552)
-+..+|+.+|+.++++|.+|.|.|.... +.++ .+.+.. +.++++.+. .+.+++.++|.
T Consensus 209 -------l~~~~l~~rGiA~LtvDmPG~G~s~~~~-l~~D--------~~~l~~----aVLd~L~~~p~VD~~RV~~~G~ 268 (411)
T PF06500_consen 209 -------LFRDYLAPRGIAMLTVDMPGQGESPKWP-LTQD--------SSRLHQ----AVLDYLASRPWVDHTRVGAWGF 268 (411)
T ss_dssp -------HHHCCCHHCT-EEEEE--TTSGGGTTT--S-S---------CCHHHH----HHHHHHHHSTTEEEEEEEEEEE
T ss_pred -------HHHHHHHhCCCEEEEEccCCCcccccCC-CCcC--------HHHHHH----HHHHHHhcCCccChhheEEEEe
Confidence 1345688999999999999999996432 2322 112222 556666553 34569999999
Q ss_pred chhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 163 SMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 163 SmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
|+||.+|..+|..++ .+|+++|.++|++.
T Consensus 269 SfGGy~AvRlA~le~---~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 269 SFGGYYAVRLAALED---PRLKAVVALGAPVH 297 (411)
T ss_dssp THHHHHHHHHHHHTT---TT-SEEEEES---S
T ss_pred ccchHHHHHHHHhcc---cceeeEeeeCchHh
Confidence 999999999998776 57999999998764
No 86
>PRK10162 acetyl esterase; Provisional
Probab=99.29 E-value=3e-10 Score=118.36 Aligned_cols=129 Identities=17% Similarity=0.113 Sum_probs=85.8
Q ss_pred ceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCC---CCCccccccCCcccccccccccccCCCCCCCccccC
Q psy3848 11 AESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVF---GSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVA 87 (552)
Q Consensus 11 ~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~---~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (552)
.+...+.+.+|. +.+..+.+.. ...|+||++||.+ ++...|..
T Consensus 57 ~~~~~i~~~~g~-i~~~~y~P~~-----~~~p~vv~~HGGg~~~g~~~~~~~---------------------------- 102 (318)
T PRK10162 57 TRAYMVPTPYGQ-VETRLYYPQP-----DSQATLFYLHGGGFILGNLDTHDR---------------------------- 102 (318)
T ss_pred EEEEEEecCCCc-eEEEEECCCC-----CCCCEEEEEeCCcccCCCchhhhH----------------------------
Confidence 567788888883 6665554432 3468999999965 34444444
Q ss_pred CCcHHHHHHHHh-CCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHH---HcCC--CcEEEEE
Q psy3848 88 GPDTALAYLLAD-KGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILN---KTDH--TQMIYIG 161 (552)
Q Consensus 88 ~p~~~la~~La~-~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~---~~g~--~ki~lVG 161 (552)
+...|++ .|+.|+.+|+|.... +. +.... .|+.+.++++.+ .+++ ++++++|
T Consensus 103 -----~~~~la~~~g~~Vv~vdYrlape---~~-------------~p~~~-~D~~~a~~~l~~~~~~~~~d~~~i~l~G 160 (318)
T PRK10162 103 -----IMRLLASYSGCTVIGIDYTLSPE---AR-------------FPQAI-EEIVAVCCYFHQHAEDYGINMSRIGFAG 160 (318)
T ss_pred -----HHHHHHHHcCCEEEEecCCCCCC---CC-------------CCCcH-HHHHHHHHHHHHhHHHhCCChhHEEEEE
Confidence 6777876 599999999994321 11 11112 256677777754 4554 5899999
Q ss_pred echhHHHHHHHHHcCCcc---hhchheeeeccccccc
Q psy3848 162 HSMGTTMFYVLTSQRPEY---NEKLLGAISLAPVAYL 195 (552)
Q Consensus 162 HSmGG~ial~~a~~~Pe~---~~~l~~~I~laP~~~~ 195 (552)
+|+||.+++.++.+..+. ...+.+++++.|....
T Consensus 161 ~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 161 DSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 999999999998764322 1457777888886543
No 87
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.29 E-value=2.3e-10 Score=114.81 Aligned_cols=126 Identities=22% Similarity=0.288 Sum_probs=84.4
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcH
Q psy3848 12 ESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDT 91 (552)
Q Consensus 12 e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 91 (552)
+...+.+.|+..-.++..|.+. +..|.||++|+..|-......
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~-----~~~P~VIv~hei~Gl~~~i~~-------------------------------- 45 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGA-----GGFPGVIVLHEIFGLNPHIRD-------------------------------- 45 (236)
T ss_pred cceEeeCCCceEeEEEecCCcC-----CCCCEEEEEecccCCchHHHH--------------------------------
Confidence 4556778884433344444442 334899999999887775554
Q ss_pred HHHHHHHhCCceEEEEcCCC-CCCCCCCCCCCCCcccc---cccChhhhhhccHHHHHHHHHHHc--CCCcEEEEEechh
Q psy3848 92 ALAYLLADKGYDVWLGNARG-NTYSRSHISYSPMDLAF---WDFSFHEMGYFDLPAEIDFILNKT--DHTQMIYIGHSMG 165 (552)
Q Consensus 92 ~la~~La~~Gy~Via~D~RG-~G~S~~~~~~sp~~~~~---~~~s~~~~~~~Dl~a~I~~I~~~~--g~~ki~lVGHSmG 165 (552)
+++.|++.||.|+++|+-+ .|.+.... ..+..... -..+..+.. .|+.+.++++...- +.+++.++|+|||
T Consensus 46 -~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~d~~a~~~~L~~~~~~~~~~ig~~GfC~G 122 (236)
T COG0412 46 -VARRLAKAGYVVLAPDLYGRQGDPTDIE-DEPAELETGLVERVDPAEVL-ADIDAALDYLARQPQVDPKRIGVVGFCMG 122 (236)
T ss_pred -HHHHHHhCCcEEEechhhccCCCCCccc-ccHHHHhhhhhccCCHHHHH-HHHHHHHHHHHhCCCCCCceEEEEEEccc
Confidence 9999999999999999986 33332211 01111000 012223333 38889999887654 3568999999999
Q ss_pred HHHHHHHHHcCC
Q psy3848 166 TTMFYVLTSQRP 177 (552)
Q Consensus 166 G~ial~~a~~~P 177 (552)
|.+++.++...|
T Consensus 123 G~~a~~~a~~~~ 134 (236)
T COG0412 123 GGLALLAATRAP 134 (236)
T ss_pred HHHHHHhhcccC
Confidence 999999998876
No 88
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=99.29 E-value=2.9e-12 Score=103.04 Aligned_cols=58 Identities=52% Similarity=0.963 Sum_probs=40.7
Q ss_pred ccccccCCCceEEEEECCCCcEEEEEEEcCCCC-CCCCCCCcEEEEeCCCCCCCccccc
Q psy3848 2 KIIRRHGYPAESYIVQTEDGYLLEIHRIPYGRK-GRRSGKKEVVFLQHGVFGSSADWVV 59 (552)
Q Consensus 2 ~~~~~~g~p~e~~~V~t~DG~~L~~~~i~~~~~-~~~~g~~~~VlLlHG~~~ss~~w~~ 59 (552)
++|+.+|||+|+|.|+|+|||.|.+||++.++. ....++++||+|+||+.+++..|..
T Consensus 3 ~~i~~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv~ 61 (63)
T PF04083_consen 3 ELIEKHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWVL 61 (63)
T ss_dssp HHHHHTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGCS
T ss_pred HHHHHcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHHc
Confidence 689999999999999999999999999998752 2344678999999999999999975
No 89
>KOG2564|consensus
Probab=99.29 E-value=1e-11 Score=125.10 Aligned_cols=107 Identities=22% Similarity=0.323 Sum_probs=81.8
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhC-CceEEEEcCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADK-GYDVWLGNARGNTYSRS 117 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~-Gy~Via~D~RG~G~S~~ 117 (552)
..+|.++|+||.+.|.-.|.. ++..|..+ ..+|+|+|+||||.|.-
T Consensus 72 t~gpil~l~HG~G~S~LSfA~---------------------------------~a~el~s~~~~r~~a~DlRgHGeTk~ 118 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSFAI---------------------------------FASELKSKIRCRCLALDLRGHGETKV 118 (343)
T ss_pred CCccEEEEeecCcccchhHHH---------------------------------HHHHHHhhcceeEEEeeccccCcccc
Confidence 578999999999999999998 88887764 57899999999999973
Q ss_pred CCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecc
Q psy3848 118 HISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLA 190 (552)
Q Consensus 118 ~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~la 190 (552)
. + .. +++.+.++. |+.+.|.++--.. ..++++|||||||.++...|+..- +.+++|++.+.
T Consensus 119 ~----~-e~---dlS~eT~~K-D~~~~i~~~fge~-~~~iilVGHSmGGaIav~~a~~k~--lpsl~Gl~viD 179 (343)
T KOG2564|consen 119 E----N-ED---DLSLETMSK-DFGAVIKELFGEL-PPQIILVGHSMGGAIAVHTAASKT--LPSLAGLVVID 179 (343)
T ss_pred C----C-hh---hcCHHHHHH-HHHHHHHHHhccC-CCceEEEeccccchhhhhhhhhhh--chhhhceEEEE
Confidence 2 2 12 688899997 7777766654322 368999999999999987776532 23466665543
No 90
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.26 E-value=1.2e-10 Score=114.25 Aligned_cols=60 Identities=13% Similarity=0.048 Sum_probs=45.1
Q ss_pred cccEEEEEeCCCCCCCHHHHHHHHHhCCCCc-cceEEEeCCCCcccccccccchHHHHHHHHHHHHhh
Q psy3848 384 STKVAFFYADNDLLTNEQDVKELYTLLPNPV-GLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 450 (552)
Q Consensus 384 ~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~-~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~ 450 (552)
.+|++++||++|.++|.+.++...+.+.+.. .+....+++.||- ...+.+.++.+||+++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~-------i~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE-------ISPEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS---------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC-------CCHHHHHHHHHHHhhh
Confidence 6799999999999999999888888775432 3467889999995 3467889999999864
No 91
>PRK10115 protease 2; Provisional
Probab=99.24 E-value=3.7e-10 Score=129.25 Aligned_cols=147 Identities=20% Similarity=0.253 Sum_probs=100.8
Q ss_pred ccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccc
Q psy3848 6 RHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWV 85 (552)
Q Consensus 6 ~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (552)
...+.+|...+++.||..+.++.+.... ....++.|.||++||.++.+..+..
T Consensus 411 ~~~~~~e~v~~~s~DG~~Ip~~l~~~~~-~~~~~~~P~ll~~hGg~~~~~~p~f-------------------------- 463 (686)
T PRK10115 411 AANYRSEHLWITARDGVEVPVSLVYHRK-HFRKGHNPLLVYGYGSYGASIDADF-------------------------- 463 (686)
T ss_pred ccccEEEEEEEECCCCCEEEEEEEEECC-CCCCCCCCEEEEEECCCCCCCCCCc--------------------------
Confidence 3466788999999999999875543211 1112567999999998887765443
Q ss_pred cCCCcHHHHHHHHhCCceEEEEcCCCCCCCCC--CCCCCCCcccccccChhhhhhccHHHHHHHHHHH--cCCCcEEEEE
Q psy3848 86 VAGPDTALAYLLADKGYDVWLGNARGNTYSRS--HISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK--TDHTQMIYIG 161 (552)
Q Consensus 86 ~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~--~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~--~g~~ki~lVG 161 (552)
......|+++||.|..+|.||-|.=.. +....-..+ ..+++ |+.++++++.++ ++.+++.+.|
T Consensus 464 -----~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k---~~~~~-----D~~a~~~~Lv~~g~~d~~rl~i~G 530 (686)
T PRK10115 464 -----SFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKK---KNTFN-----DYLDACDALLKLGYGSPSLCYGMG 530 (686)
T ss_pred -----cHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcC---CCcHH-----HHHHHHHHHHHcCCCChHHeEEEE
Confidence 124557888999999999998542210 000000000 12233 667899988865 2346899999
Q ss_pred echhHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 162 HSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 162 HSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
-|.||.++.+.+.++|+ ...++|+..|+.++
T Consensus 531 ~S~GG~l~~~~~~~~Pd---lf~A~v~~vp~~D~ 561 (686)
T PRK10115 531 GSAGGMLMGVAINQRPE---LFHGVIAQVPFVDV 561 (686)
T ss_pred ECHHHHHHHHHHhcChh---heeEEEecCCchhH
Confidence 99999999999999995 47777777777764
No 92
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.23 E-value=2.1e-11 Score=124.83 Aligned_cols=111 Identities=21% Similarity=0.282 Sum_probs=80.6
Q ss_pred CCCcEEEEeCCCCCCC-ccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHH-HHhCCceEEEEcCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSS-ADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYL-LADKGYDVWLGNARGNTYSR 116 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~-La~~Gy~Via~D~RG~G~S~ 116 (552)
..+|+||++||+.++. ..|.. .++.. |...+|+|+++|++|++.+.
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~--------------------------------~l~~~ll~~~~~nVi~vD~~~~~~~~ 81 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWIS--------------------------------DLRKAYLSRGDYNVIVVDWGRGANPN 81 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHH--------------------------------HHHHHHHhcCCCEEEEEECccccccC
Confidence 4578999999999987 66665 25544 44457999999999873221
Q ss_pred CCCCCCCCcccccccChhhhhhccHHHHHHHHHHHc--CCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 117 SHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT--DHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 117 ~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~--g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
. . . . ..+...++. ++.+.|+.+.+.. +.+++++|||||||.++..++.++|+ +|..++++.|+..
T Consensus 82 y----~-~-a---~~~~~~v~~-~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~---~v~~iv~LDPa~p 148 (275)
T cd00707 82 Y----P-Q-A---VNNTRVVGA-ELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNG---KLGRITGLDPAGP 148 (275)
T ss_pred h----H-H-H---HHhHHHHHH-HHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcC---ccceeEEecCCcc
Confidence 1 1 0 0 233455554 7778888888764 45789999999999999999999885 5666677877643
No 93
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.22 E-value=6.5e-11 Score=128.31 Aligned_cols=110 Identities=15% Similarity=0.202 Sum_probs=78.9
Q ss_pred CCCcEEEEeCCCCCCC--ccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHh--CCceEEEEcCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSS--ADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLAD--KGYDVWLGNARGNTY 114 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss--~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~--~Gy~Via~D~RG~G~ 114 (552)
..+|++|++||+.++. ..|.. .++..|.. ..|+|+++|++|+|.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~--------------------------------~l~~al~~~~~d~nVI~VDw~g~g~ 86 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVP--------------------------------KLVAALYEREPSANVIVVDWLSRAQ 86 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHH--------------------------------HHHHHHHhccCCCEEEEEECCCcCC
Confidence 4578999999998754 34554 25555442 259999999999998
Q ss_pred CCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC--CCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccc
Q psy3848 115 SRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD--HTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPV 192 (552)
Q Consensus 115 S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g--~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~ 192 (552)
|..... . .+ ...++. ++.++|+.+.+.++ .+++++|||||||.+|..++.++|++ |..++++.|+
T Consensus 87 s~y~~a-----~---~~-t~~vg~-~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~r---V~rItgLDPA 153 (442)
T TIGR03230 87 QHYPTS-----A---AY-TKLVGK-DVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHK---VNRITGLDPA 153 (442)
T ss_pred CCCccc-----c---cc-HHHHHH-HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcc---eeEEEEEcCC
Confidence 753211 0 12 244554 77788888876554 68999999999999999999988854 5556777775
Q ss_pred c
Q psy3848 193 A 193 (552)
Q Consensus 193 ~ 193 (552)
.
T Consensus 154 g 154 (442)
T TIGR03230 154 G 154 (442)
T ss_pred C
Confidence 4
No 94
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.11 E-value=3e-10 Score=130.14 Aligned_cols=127 Identities=19% Similarity=0.200 Sum_probs=87.7
Q ss_pred EEECCCCcEEEEEEEcCCCC--CCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHH
Q psy3848 15 IVQTEDGYLLEIHRIPYGRK--GRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTA 92 (552)
Q Consensus 15 ~V~t~DG~~L~~~~i~~~~~--~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 92 (552)
.+.+.||..+++.+...+.. .......|+|+++||++++...|..
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~--------------------------------- 467 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALA--------------------------------- 467 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHH---------------------------------
Confidence 45567776666555432211 0011235799999999999999988
Q ss_pred HHHHHHhCCceEEEEcCCCCCCCCCCCCCC-----C-Cccccccc--------ChhhhhhccHHHHHHHHH------HH-
Q psy3848 93 LAYLLADKGYDVWLGNARGNTYSRSHISYS-----P-MDLAFWDF--------SFHEMGYFDLPAEIDFIL------NK- 151 (552)
Q Consensus 93 la~~La~~Gy~Via~D~RG~G~S~~~~~~s-----p-~~~~~~~~--------s~~~~~~~Dl~a~I~~I~------~~- 151 (552)
++..|+++||+|+++|+||||.|....... . ....|.+. .++..+. |+......+. ..
T Consensus 468 lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~-Dll~L~~~l~~~~~~~~~~ 546 (792)
T TIGR03502 468 FAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL-DLLGLRLSLNGSALAGAPL 546 (792)
T ss_pred HHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH-HHHHHHHHHhccccccccc
Confidence 899999999999999999999994321000 0 11112222 5677775 7777777665 22
Q ss_pred -----cCCCcEEEEEechhHHHHHHHHHc
Q psy3848 152 -----TDHTQMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 152 -----~g~~ki~lVGHSmGG~ial~~a~~ 175 (552)
++..+++++||||||.++..++..
T Consensus 547 ~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 547 SGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 335689999999999999999975
No 95
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.11 E-value=2e-09 Score=103.83 Aligned_cols=87 Identities=28% Similarity=0.399 Sum_probs=69.8
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcE-EEEEechhHHHH
Q psy3848 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQM-IYIGHSMGTTMF 169 (552)
Q Consensus 91 ~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki-~lVGHSmGG~ia 169 (552)
+.+++.|.++||.++.+|+||-|.|.+. |+..+-|.. |..+++++++......+. .+.|+|.|+.|+
T Consensus 50 ~~la~~l~~~G~atlRfNfRgVG~S~G~----------fD~GiGE~~--Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia 117 (210)
T COG2945 50 QTLARALVKRGFATLRFNFRGVGRSQGE----------FDNGIGELE--DAAAALDWLQARHPDSASCWLAGFSFGAYIA 117 (210)
T ss_pred HHHHHHHHhCCceEEeecccccccccCc----------ccCCcchHH--HHHHHHHHHHhhCCCchhhhhcccchHHHHH
Confidence 4588999999999999999999999852 245566666 899999999988775554 789999999999
Q ss_pred HHHHHcCCcchhchheeeeccccc
Q psy3848 170 YVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 170 l~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
+.+|.+.|| ..++|+++|..
T Consensus 118 ~~la~r~~e----~~~~is~~p~~ 137 (210)
T COG2945 118 MQLAMRRPE----ILVFISILPPI 137 (210)
T ss_pred HHHHHhccc----ccceeeccCCC
Confidence 999999885 34455555544
No 96
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.08 E-value=2.3e-10 Score=96.02 Aligned_cols=78 Identities=31% Similarity=0.298 Sum_probs=61.5
Q ss_pred CcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhC
Q psy3848 21 GYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADK 100 (552)
Q Consensus 21 G~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~ 100 (552)
|..|.++.|.+.. ..+.+|+++||++.++..|.. ++..|+++
T Consensus 1 G~~L~~~~w~p~~-----~~k~~v~i~HG~~eh~~ry~~---------------------------------~a~~L~~~ 42 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-----PPKAVVVIVHGFGEHSGRYAH---------------------------------LAEFLAEQ 42 (79)
T ss_pred CcEEEEEEecCCC-----CCCEEEEEeCCcHHHHHHHHH---------------------------------HHHHHHhC
Confidence 6778888887653 258899999999999998877 99999999
Q ss_pred CceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHH
Q psy3848 101 GYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEI 145 (552)
Q Consensus 101 Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I 145 (552)
||.|+++|+||||+|.+.... .-++++++. |+.+.+
T Consensus 43 G~~V~~~D~rGhG~S~g~rg~--------~~~~~~~v~-D~~~~~ 78 (79)
T PF12146_consen 43 GYAVFAYDHRGHGRSEGKRGH--------IDSFDDYVD-DLHQFI 78 (79)
T ss_pred CCEEEEECCCcCCCCCCcccc--------cCCHHHHHH-HHHHHh
Confidence 999999999999999853321 234677775 555544
No 97
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.02 E-value=2.9e-08 Score=101.38 Aligned_cols=117 Identities=19% Similarity=0.240 Sum_probs=90.0
Q ss_pred CcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhC---CceEEEEcCCCCCCCCC
Q psy3848 41 KEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADK---GYDVWLGNARGNTYSRS 117 (552)
Q Consensus 41 ~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~---Gy~Via~D~RG~G~S~~ 117 (552)
+..++++.|=+|-...|.. +...|.++ .+.|++..+.||-.+..
T Consensus 2 ~~li~~IPGNPGlv~fY~~---------------------------------Fl~~L~~~l~~~~~i~~ish~Gh~~~~~ 48 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEE---------------------------------FLSALYEKLNPQFEILGISHAGHSTSPS 48 (266)
T ss_pred cEEEEEECCCCChHHHHHH---------------------------------HHHHHHHhCCCCCeeEEecCCCCcCCcc
Confidence 4689999999998888877 77777754 69999999999987765
Q ss_pred CCCCCCCcccccccChhhhhhccHHHHHHHHHHHc--CCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 118 HISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT--DHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 118 ~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~--g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
....+.... .|++++.+. -..+.|+.+.... ...+++++|||+|+.|++..+.+.++...+|..++++-|...
T Consensus 49 ~~~~~~~~~---~~sL~~QI~-hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 49 NSKFSPNGR---LFSLQDQIE-HKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred cccccCCCC---ccCHHHHHH-HHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 421111222 678888886 4556666666544 457899999999999999999999855578888899999654
No 98
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.00 E-value=1.9e-08 Score=98.28 Aligned_cols=102 Identities=20% Similarity=0.187 Sum_probs=78.7
Q ss_pred cEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCC
Q psy3848 42 EVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISY 121 (552)
Q Consensus 42 ~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~ 121 (552)
++||++||.+|+...|.. ++..|.+.++.|+++..+|.+...
T Consensus 1 ~~lf~~p~~gG~~~~y~~---------------------------------la~~l~~~~~~v~~i~~~~~~~~~----- 42 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRP---------------------------------LARALPDDVIGVYGIEYPGRGDDE----- 42 (229)
T ss_dssp -EEEEESSTTCSGGGGHH---------------------------------HHHHHTTTEEEEEEECSTTSCTTS-----
T ss_pred CeEEEEcCCccCHHHHHH---------------------------------HHHhCCCCeEEEEEEecCCCCCCC-----
Confidence 489999999999999888 999998855899999999887222
Q ss_pred CCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 122 SPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 122 sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
+. ..++++++. ..++.|+......+++++|||+||.+|+.+|.+-.+....+..++++.+
T Consensus 43 -~~-----~~si~~la~----~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~ 102 (229)
T PF00975_consen 43 -PP-----PDSIEELAS----RYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDS 102 (229)
T ss_dssp -HE-----ESSHHHHHH----HHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESC
T ss_pred -CC-----CCCHHHHHH----HHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecC
Confidence 11 356888886 6666776666656999999999999999999875544455666667764
No 99
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.98 E-value=1.2e-08 Score=102.99 Aligned_cols=136 Identities=18% Similarity=0.261 Sum_probs=90.6
Q ss_pred EEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHH
Q psy3848 14 YIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTAL 93 (552)
Q Consensus 14 ~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l 93 (552)
.++..-+|..+..|.+-+.. ++++-|.||--||.++....|.. +
T Consensus 59 vTf~g~~g~rI~gwlvlP~~---~~~~~P~vV~fhGY~g~~g~~~~---------------------------------~ 102 (321)
T COG3458 59 VTFTGYGGARIKGWLVLPRH---EKGKLPAVVQFHGYGGRGGEWHD---------------------------------M 102 (321)
T ss_pred EEEeccCCceEEEEEEeecc---cCCccceEEEEeeccCCCCCccc---------------------------------c
Confidence 45667788888888764321 12567899999999999987765 1
Q ss_pred HHHHHhCCceEEEEcCCCCCCCCCCCCCCCCc---cccc---------ccChhhhhhccHHHHHHHHHHH--cCCCcEEE
Q psy3848 94 AYLLADKGYDVWLGNARGNTYSRSHISYSPMD---LAFW---------DFSFHEMGYFDLPAEIDFILNK--TDHTQMIY 159 (552)
Q Consensus 94 a~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~---~~~~---------~~s~~~~~~~Dl~a~I~~I~~~--~g~~ki~l 159 (552)
.. ++..||.|+.+|-||.|.|+.....+|.. ..|. +|=+.... .|+..+++.+..- .+.+++.+
T Consensus 103 l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~-~D~~~ave~~~sl~~vde~Ri~v 180 (321)
T COG3458 103 LH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVF-LDAVRAVEILASLDEVDEERIGV 180 (321)
T ss_pred cc-ccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeeh-HHHHHHHHHHhccCccchhheEE
Confidence 11 55569999999999999995432222221 1111 11122222 3777888766543 34568999
Q ss_pred EEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 160 IGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 160 VGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
.|.|+||.++++.++..| ++...++.-|
T Consensus 181 ~G~SqGGglalaaaal~~----rik~~~~~~P 208 (321)
T COG3458 181 TGGSQGGGLALAAAALDP----RIKAVVADYP 208 (321)
T ss_pred eccccCchhhhhhhhcCh----hhhccccccc
Confidence 999999999999998876 4555444444
No 100
>COG0400 Predicted esterase [General function prediction only]
Probab=98.98 E-value=1e-08 Score=101.17 Aligned_cols=59 Identities=10% Similarity=-0.067 Sum_probs=43.5
Q ss_pred cccEEEEEeCCCCCCCHHHHHHHHHhCCCC-ccceEEEeCCCCcccccccccchHHHHHHHHHHHHhh
Q psy3848 384 STKVAFFYADNDLLTNEQDVKELYTLLPNP-VGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 450 (552)
Q Consensus 384 ~~PvLii~G~~D~i~p~~~~~~l~~~lp~~-~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~ 450 (552)
.+||++++|++|++||...+.++.+.+... ..+....++ .||. ...+..+.+.+||...
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~-------i~~e~~~~~~~wl~~~ 205 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHE-------IPPEELEAARSWLANT 205 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCc-------CCHHHHHHHHHHHHhc
Confidence 469999999999999999988888776532 222344455 7885 4556678888898753
No 101
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.96 E-value=3.5e-08 Score=100.32 Aligned_cols=135 Identities=21% Similarity=0.233 Sum_probs=83.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCcc-ccccCCcccccccccccccCCCCCCCccccCCC-cHHHHHHH
Q psy3848 20 DGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSAD-WVVAGPDTALGKATYVTSDKGIGSSADWVVAGP-DTALAYLL 97 (552)
Q Consensus 20 DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~la~~L 97 (552)
||..|....+.++. ...++-|+||..|+.+.+... .... ...+ .......|
T Consensus 1 DGv~L~adv~~P~~--~~~~~~P~il~~tpY~~~~~~~~~~~-------------------------~~~~~~~~~~~~~ 53 (272)
T PF02129_consen 1 DGVRLAADVYRPGA--DGGGPFPVILTRTPYGKGDQTASDLA-------------------------GANPGPPSARRPF 53 (272)
T ss_dssp TS-EEEEEEEEE----TTSSSEEEEEEEESSTCTC-HHHHHH-------------------------TTCHHSHGGGHHH
T ss_pred CCCEEEEEEEecCC--CCCCcccEEEEccCcCCCCCcccchh-------------------------hhhcccchhHHHH
Confidence 89999886654411 112567888888998865411 1110 0000 00112238
Q ss_pred HhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC-CCcEEEEEechhHHHHHHHHHcC
Q psy3848 98 ADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD-HTQMIYIGHSMGTTMFYVLTSQR 176 (552)
Q Consensus 98 a~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g-~~ki~lVGHSmGG~ial~~a~~~ 176 (552)
+++||.|+..|.||.|.|.+.-. + ....+.. |..+.|+++..+-- -.+|-++|.|.+|...+.+|++.
T Consensus 54 ~~~GY~vV~~D~RG~g~S~G~~~--~-------~~~~e~~--D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~ 122 (272)
T PF02129_consen 54 AERGYAVVVQDVRGTGGSEGEFD--P-------MSPNEAQ--DGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARR 122 (272)
T ss_dssp HHTT-EEEEEE-TTSTTS-S-B---T-------TSHHHHH--HHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT
T ss_pred HhCCCEEEEECCcccccCCCccc--c-------CChhHHH--HHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcC
Confidence 99999999999999999986432 1 1233333 88899999987622 13899999999999999999977
Q ss_pred Ccchhchheeeeccccccc
Q psy3848 177 PEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 177 Pe~~~~l~~~I~laP~~~~ 195 (552)
| ..|++++..++....
T Consensus 123 ~---p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 123 P---PHLKAIVPQSGWSDL 138 (272)
T ss_dssp ----TTEEEEEEESE-SBT
T ss_pred C---CCceEEEecccCCcc
Confidence 7 467777776665443
No 102
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.96 E-value=3.6e-08 Score=98.30 Aligned_cols=118 Identities=15% Similarity=0.242 Sum_probs=77.7
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcH
Q psy3848 12 ESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDT 91 (552)
Q Consensus 12 e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 91 (552)
-.|.+..+||..+.+|.-++.. ..+.++++|++..||+..-..+..
T Consensus 3 idhvi~~~~~~~I~vwet~P~~--~~~~~~~tiliA~Gf~rrmdh~ag-------------------------------- 48 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRVWETRPKN--NEPKRNNTILIAPGFARRMDHFAG-------------------------------- 48 (294)
T ss_dssp EEEEEEETTTEEEEEEEE---T--TS---S-EEEEE-TT-GGGGGGHH--------------------------------
T ss_pred ccceeEcCCCCEEEEeccCCCC--CCcccCCeEEEecchhHHHHHHHH--------------------------------
Confidence 3578899999999998765542 223456899999999988888887
Q ss_pred HHHHHHHhCCceEEEEcCCC-CCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHH
Q psy3848 92 ALAYLLADKGYDVWLGNARG-NTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFY 170 (552)
Q Consensus 92 ~la~~La~~Gy~Via~D~RG-~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial 170 (552)
+|++|+..||+|+.+|.-- -|.|++.+. +|++..... |+...++++. ..|..++-+|.-|+-|-+|+
T Consensus 49 -LA~YL~~NGFhViRyDsl~HvGlSsG~I~---------eftms~g~~-sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy 116 (294)
T PF02273_consen 49 -LAEYLSANGFHVIRYDSLNHVGLSSGDIN---------EFTMSIGKA-SLLTVIDWLA-TRGIRRIGLIAASLSARIAY 116 (294)
T ss_dssp -HHHHHHTTT--EEEE---B----------------------HHHHHH-HHHHHHHHHH-HTT---EEEEEETTHHHHHH
T ss_pred -HHHHHhhCCeEEEeccccccccCCCCChh---------hcchHHhHH-HHHHHHHHHH-hcCCCcchhhhhhhhHHHHH
Confidence 9999999999999999763 366665432 688888776 9999999888 67889999999999999999
Q ss_pred HHHHc
Q psy3848 171 VLTSQ 175 (552)
Q Consensus 171 ~~a~~ 175 (552)
..|++
T Consensus 117 ~Va~~ 121 (294)
T PF02273_consen 117 EVAAD 121 (294)
T ss_dssp HHTTT
T ss_pred HHhhc
Confidence 99974
No 103
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.95 E-value=1.9e-08 Score=116.50 Aligned_cols=89 Identities=18% Similarity=0.213 Sum_probs=67.8
Q ss_pred HHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC----------------CC
Q psy3848 92 ALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD----------------HT 155 (552)
Q Consensus 92 ~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g----------------~~ 155 (552)
.+..+|+.+||.|+..|.||.|.|.+... .+..++.. |..+.|+++..... -.
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~---------~~~~~E~~--D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnG 338 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT---------TGDYQEIE--SMKAVIDWLNGRATAYTDRTRGKEVKADWSNG 338 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc---------cCCHHHHH--HHHHHHHHHhhCCccccccccccccccCCCCC
Confidence 46788999999999999999999986431 11223333 88899999984311 25
Q ss_pred cEEEEEechhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 156 QMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 156 ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
++.++|.|+||++++.+|+..| ..|+++|..++...
T Consensus 339 kVGm~G~SY~G~~~~~aAa~~p---p~LkAIVp~a~is~ 374 (767)
T PRK05371 339 KVAMTGKSYLGTLPNAVATTGV---EGLETIIPEAAISS 374 (767)
T ss_pred eeEEEEEcHHHHHHHHHHhhCC---CcceEEEeeCCCCc
Confidence 8999999999999999998877 56777777776543
No 104
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.94 E-value=8.2e-09 Score=98.85 Aligned_cols=91 Identities=24% Similarity=0.348 Sum_probs=59.3
Q ss_pred EEEeCCCCCCC-ccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCC
Q psy3848 44 VFLQHGVFGSS-ADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYS 122 (552)
Q Consensus 44 VlLlHG~~~ss-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~s 122 (552)
|+++||++++. ..|.. -+...|... ++|..+|+- .
T Consensus 1 v~IvhG~~~s~~~HW~~--------------------------------wl~~~l~~~-~~V~~~~~~-----------~ 36 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQP--------------------------------WLERQLENS-VRVEQPDWD-----------N 36 (171)
T ss_dssp EEEE--TTSSTTTSTHH--------------------------------HHHHHHTTS-EEEEEC--T-----------S
T ss_pred CEEeCCCCCCCccHHHH--------------------------------HHHHhCCCC-eEEeccccC-----------C
Confidence 68999999985 57877 366777776 899988872 2
Q ss_pred CCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 123 PMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 123 p~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
| +.++|. +.++..+...+ +++++||||+|+..++.+++.. ...+|.|++++||...
T Consensus 37 P--------~~~~W~-----~~l~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~--~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 37 P--------DLDEWV-----QALDQAIDAID-EPTILVAHSLGCLTALRWLAEQ--SQKKVAGALLVAPFDP 92 (171)
T ss_dssp ----------HHHHH-----HHHHHCCHC-T-TTEEEEEETHHHHHHHHHHHHT--CCSSEEEEEEES--SC
T ss_pred C--------CHHHHH-----HHHHHHHhhcC-CCeEEEEeCHHHHHHHHHHhhc--ccccccEEEEEcCCCc
Confidence 2 245555 34443333333 4699999999999999999522 2378999999998754
No 105
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.93 E-value=2.1e-08 Score=103.55 Aligned_cols=114 Identities=16% Similarity=0.191 Sum_probs=71.4
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCC----CCCCC
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNAR----GNTYS 115 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~R----G~G~S 115 (552)
....||||-|++.....-.. -..++..|...||.|+-+-++ |+|.|
T Consensus 32 ~~~~llfIGGLtDGl~tvpY------------------------------~~~La~aL~~~~wsl~q~~LsSSy~G~G~~ 81 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPY------------------------------LPDLAEALEETGWSLFQVQLSSSYSGWGTS 81 (303)
T ss_dssp SSSEEEEE--TT--TT-STC------------------------------HHHHHHHHT-TT-EEEEE--GGGBTTS-S-
T ss_pred CCcEEEEECCCCCCCCCCch------------------------------HHHHHHHhccCCeEEEEEEecCccCCcCcc
Confidence 45689999999886654222 135899998889999999886 34433
Q ss_pred CCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHc----CCCcEEEEEechhHHHHHHHHHcCCc--chhchheeeec
Q psy3848 116 RSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT----DHTQMIYIGHSMGTTMFYVLTSQRPE--YNEKLLGAISL 189 (552)
Q Consensus 116 ~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~----g~~ki~lVGHSmGG~ial~~a~~~Pe--~~~~l~~~I~l 189 (552)
+ ++.=++ |+.++|++++... +.++|+++|||.|+.-++.|+..... ....|.|+|+.
T Consensus 82 S----------------L~~D~~-eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQ 144 (303)
T PF08538_consen 82 S----------------LDRDVE-EIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQ 144 (303)
T ss_dssp -----------------HHHHHH-HHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEE
T ss_pred h----------------hhhHHH-HHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEe
Confidence 2 222232 7889999999874 56799999999999999999986532 24679999999
Q ss_pred cccccccCCCc
Q psy3848 190 APVAYLSRTRS 200 (552)
Q Consensus 190 aP~~~~~~~~~ 200 (552)
||+........
T Consensus 145 ApVSDREa~~~ 155 (303)
T PF08538_consen 145 APVSDREAILN 155 (303)
T ss_dssp EE---TTSTTT
T ss_pred CCCCChhHhhh
Confidence 99988765443
No 106
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.90 E-value=4e-07 Score=99.07 Aligned_cols=98 Identities=18% Similarity=0.306 Sum_probs=63.8
Q ss_pred HHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCC-CcEEEEEechhHHHHHH
Q psy3848 93 LAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDH-TQMIYIGHSMGTTMFYV 171 (552)
Q Consensus 93 la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~-~ki~lVGHSmGG~ial~ 171 (552)
+.-.|.. |+.||-.-+. ... .| .-|+.|... -..++++.|.+.... .|.++||.|+||.+++.
T Consensus 93 vG~AL~~-GHPvYFV~F~------p~P--~p------gQTl~DV~~-ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~m 156 (581)
T PF11339_consen 93 VGVALRA-GHPVYFVGFF------PEP--EP------GQTLEDVMR-AEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMM 156 (581)
T ss_pred HHHHHHc-CCCeEEEEec------CCC--CC------CCcHHHHHH-HHHHHHHHHHHhCCCCCCceEEeccHHHHHHHH
Confidence 4445655 9999998875 111 12 234666554 344566666655543 38999999999999999
Q ss_pred HHHcCCcchhchheeeeccccccccC--CCchhhhhhhh
Q psy3848 172 LTSQRPEYNEKLLGAISLAPVAYLSR--TRSPIRYLAPF 208 (552)
Q Consensus 172 ~a~~~Pe~~~~l~~~I~laP~~~~~~--~~~pl~~l~~~ 208 (552)
+|+.+|+.+..+ ++.-||..|... ...|+++...+
T Consensus 157 lAA~~Pd~~gpl--vlaGaPlsywaG~~g~nPmRy~ggl 193 (581)
T PF11339_consen 157 LAALRPDLVGPL--VLAGAPLSYWAGERGDNPMRYMGGL 193 (581)
T ss_pred HHhcCcCccCce--eecCCCcccccCCCCCCcHHHhcCC
Confidence 999999754444 234567777663 34566666543
No 107
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.86 E-value=1.1e-08 Score=108.18 Aligned_cols=164 Identities=24% Similarity=0.291 Sum_probs=92.1
Q ss_pred cccCCCceEEEEECCCCcEEEEEE-EcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCc
Q psy3848 5 RRHGYPAESYIVQTEDGYLLEIHR-IPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSAD 83 (552)
Q Consensus 5 ~~~g~p~e~~~V~t~DG~~L~~~~-i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (552)
++.||..|...+++.++..+..+. +|.+.+ ++-|.||++||-+++.+... |++. | +.+ + +.+
T Consensus 82 qrdGY~~EKv~f~~~p~~~vpaylLvPd~~~----~p~PAVL~lHgHg~~Ke~~~--g~~g-------v-~~~-~--~~~ 144 (390)
T PF12715_consen 82 QRDGYTREKVEFNTTPGSRVPAYLLVPDGAK----GPFPAVLCLHGHGGGKEKMA--GEDG-------V-SPD-L--KDD 144 (390)
T ss_dssp EETTEEEEEEEE--STTB-EEEEEEEETT------S-EEEEEEE--TT--HHHHC--T----------S-SGC-G----S
T ss_pred ecCCeEEEEEEEEccCCeeEEEEEEecCCCC----CCCCEEEEeCCCCCCccccc--CCcc-------c-ccc-c--chh
Confidence 567999999999999998887664 565532 67799999999876543211 1110 0 011 1 111
Q ss_pred cccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCC---c---ccc----cccChhhhhhccHHHHHHHHHHHc-
Q psy3848 84 WVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPM---D---LAF----WDFSFHEMGYFDLPAEIDFILNKT- 152 (552)
Q Consensus 84 ~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~---~---~~~----~~~s~~~~~~~Dl~a~I~~I~~~~- 152 (552)
|. .+.+.++..|+++||-|+++|.+|+|........... + ... ...|+..+...|....++++...-
T Consensus 145 ~~--~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpe 222 (390)
T PF12715_consen 145 YD--DPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPE 222 (390)
T ss_dssp TT--STTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TT
T ss_pred hc--cccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcc
Confidence 21 2244589999999999999999999987543211110 0 001 134444444456667888876543
Q ss_pred -CCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 153 -DHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 153 -g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
+-++|.++|+||||..++.+++..+ +|.++++.+-
T Consensus 223 VD~~RIG~~GfSmGg~~a~~LaALDd----RIka~v~~~~ 258 (390)
T PF12715_consen 223 VDPDRIGCMGFSMGGYRAWWLAALDD----RIKATVANGY 258 (390)
T ss_dssp EEEEEEEEEEEGGGHHHHHHHHHH-T----T--EEEEES-
T ss_pred cCccceEEEeecccHHHHHHHHHcch----hhHhHhhhhh
Confidence 3458999999999999999999865 6766655443
No 108
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.86 E-value=2.3e-08 Score=99.78 Aligned_cols=110 Identities=21% Similarity=0.173 Sum_probs=77.5
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHH--------HhCCceEEEEcCCC
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLL--------ADKGYDVWLGNARG 111 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~L--------a~~Gy~Via~D~RG 111 (552)
.|.||||+||..|+...|+. ++..+ ....+++++.|+..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rs---------------------------------l~~~~~~~~~~~~~~~~~d~ft~df~~ 49 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRS---------------------------------LASELQRKALLNDNSSHFDFFTVDFNE 49 (225)
T ss_pred CCCEEEEECcCCCCHhHHHH---------------------------------HHHHHhhhhhhccCccceeEEEeccCc
Confidence 57899999999999888777 33333 12258999999874
Q ss_pred CCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHc-----CCCcEEEEEechhHHHHHHHHHcCCcchhchhee
Q psy3848 112 NTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT-----DHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGA 186 (552)
Q Consensus 112 ~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~-----g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~ 186 (552)
.... .+ ...+.+.+. -+.+.++.|++.+ +.+++++|||||||.++..++...+.....+.++
T Consensus 50 ~~s~-~~-----------g~~l~~q~~-~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~i 116 (225)
T PF07819_consen 50 ELSA-FH-----------GRTLQRQAE-FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTI 116 (225)
T ss_pred cccc-cc-----------cccHHHHHH-HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEE
Confidence 3211 11 122344443 5567888888777 5679999999999999999887755444678888
Q ss_pred eeccccccc
Q psy3848 187 ISLAPVAYL 195 (552)
Q Consensus 187 I~laP~~~~ 195 (552)
|.++.+...
T Consensus 117 itl~tPh~g 125 (225)
T PF07819_consen 117 ITLGTPHRG 125 (225)
T ss_pred EEEcCCCCC
Confidence 888765543
No 109
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.85 E-value=1.4e-07 Score=91.82 Aligned_cols=90 Identities=17% Similarity=0.242 Sum_probs=64.9
Q ss_pred EEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCC--ceEEEEcCCCCCCCCCCCCC
Q psy3848 44 VFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKG--YDVWLGNARGNTYSRSHISY 121 (552)
Q Consensus 44 VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~G--y~Via~D~RG~G~S~~~~~~ 121 (552)
|+.+|||.+|...... +.+.+.+++.| ..+.++|++ .
T Consensus 2 ilYlHGF~Ssp~S~Ka-------------------------------~~l~~~~~~~~~~~~~~~p~l~------~---- 40 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKA-------------------------------QALKQYFAEHGPDIQYPCPDLP------P---- 40 (187)
T ss_pred eEEecCCCCCCCCHHH-------------------------------HHHHHHHHHhCCCceEECCCCC------c----
Confidence 7899999998887665 45777888865 456667664 0
Q ss_pred CCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 122 SPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 122 sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
. .+ ++.+.++.+++....+.+.+||+||||..|..+|.+++ +.. |++.|+..+
T Consensus 41 ~----------p~-----~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~-----~~a-vLiNPav~p 93 (187)
T PF05728_consen 41 F----------PE-----EAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG-----LPA-VLINPAVRP 93 (187)
T ss_pred C----------HH-----HHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC-----CCE-EEEcCCCCH
Confidence 1 12 22255666666776667999999999999999998876 333 788887754
No 110
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.84 E-value=7.7e-08 Score=98.61 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=78.8
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCcc-ccccCCcccccccccccccCCCCCCCccccCCCcH
Q psy3848 13 SYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSAD-WVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDT 91 (552)
Q Consensus 13 ~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 91 (552)
++.|+|.-|. +.+...... ++++|++|=.|-++.+... +.. ....
T Consensus 1 eh~v~t~~G~-v~V~v~G~~-----~~~kp~ilT~HDvGlNh~scF~~----------------------------ff~~ 46 (283)
T PF03096_consen 1 EHDVETPYGS-VHVTVQGDP-----KGNKPAILTYHDVGLNHKSCFQG----------------------------FFNF 46 (283)
T ss_dssp -EEEEETTEE-EEEEEESS-------TTS-EEEEE--TT--HHHHCHH----------------------------HHCS
T ss_pred CceeccCceE-EEEEEEecC-----CCCCceEEEeccccccchHHHHH----------------------------Hhcc
Confidence 4678888883 333333222 1469999999999988766 332 0011
Q ss_pred HHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHH
Q psy3848 92 ALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYV 171 (552)
Q Consensus 92 ~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~ 171 (552)
.-...+.+ .|.|+-.|.+|+..-... .|.+ |---|+++++ +.|..++++++++.++-+|--.|+.|...
T Consensus 47 ~~m~~i~~-~f~i~Hi~aPGqe~ga~~---~p~~--y~yPsmd~LA-----e~l~~Vl~~f~lk~vIg~GvGAGAnIL~r 115 (283)
T PF03096_consen 47 EDMQEILQ-NFCIYHIDAPGQEEGAAT---LPEG--YQYPSMDQLA-----EMLPEVLDHFGLKSVIGFGVGAGANILAR 115 (283)
T ss_dssp HHHHHHHT-TSEEEEEE-TTTSTT--------TT-------HHHHH-----CTHHHHHHHHT---EEEEEETHHHHHHHH
T ss_pred hhHHHHhh-ceEEEEEeCCCCCCCccc---cccc--ccccCHHHHH-----HHHHHHHHhCCccEEEEEeeccchhhhhh
Confidence 13445555 599999999998754321 2232 1134677777 45666777899999999999999999999
Q ss_pred HHHcCCcchhchheeeecccccccc
Q psy3848 172 LTSQRPEYNEKLLGAISLAPVAYLS 196 (552)
Q Consensus 172 ~a~~~Pe~~~~l~~~I~laP~~~~~ 196 (552)
+|..+|+ ++.|+|++.|.....
T Consensus 116 fAl~~p~---~V~GLiLvn~~~~~~ 137 (283)
T PF03096_consen 116 FALKHPE---RVLGLILVNPTCTAA 137 (283)
T ss_dssp HHHHSGG---GEEEEEEES---S--
T ss_pred ccccCcc---ceeEEEEEecCCCCc
Confidence 9999994 577889999877543
No 111
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.84 E-value=1.5e-07 Score=94.18 Aligned_cols=63 Identities=11% Similarity=0.028 Sum_probs=49.8
Q ss_pred CCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHh
Q psy3848 381 KFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 449 (552)
Q Consensus 381 ~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~ 449 (552)
..++|||.++.|++|..+..+......+...+.- .+..+ ..||+-+ ....++|...|.+.+..
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f--~l~~f-dGgHFfl---~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREHTKGDF--TLRVF-DGGHFFL---NQQREEVLARLEQHLAH 235 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHhhcCCc--eEEEe-cCcceeh---hhhHHHHHHHHHHHhhh
Confidence 4578999999999999999999999999988765 34444 5689733 36777888888888754
No 112
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.82 E-value=6.6e-08 Score=93.36 Aligned_cols=87 Identities=25% Similarity=0.321 Sum_probs=65.0
Q ss_pred HHHHHHHh-CCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHH-----cCCCcEEEEEechh
Q psy3848 92 ALAYLLAD-KGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK-----TDHTQMIYIGHSMG 165 (552)
Q Consensus 92 ~la~~La~-~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~-----~g~~ki~lVGHSmG 165 (552)
.++..+++ .|+.|+.+|+| +.|. .++.+... |+.++++++++. .+.++++++|+|-|
T Consensus 19 ~~~~~la~~~g~~v~~~~Yr----------l~p~------~~~p~~~~-D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAG 81 (211)
T PF07859_consen 19 PFAARLAAERGFVVVSIDYR----------LAPE------APFPAALE-DVKAAYRWLLKNADKLGIDPERIVLIGDSAG 81 (211)
T ss_dssp HHHHHHHHHHTSEEEEEE-------------TTT------SSTTHHHH-HHHHHHHHHHHTHHHHTEEEEEEEEEEETHH
T ss_pred HHHHHHHhhccEEEEEeecc----------cccc------cccccccc-ccccceeeeccccccccccccceEEeecccc
Confidence 35666664 89999999999 2332 34566665 999999999987 56679999999999
Q ss_pred HHHHHHHHHcCCcc-hhchheeeeccccccc
Q psy3848 166 TTMFYVLTSQRPEY-NEKLLGAISLAPVAYL 195 (552)
Q Consensus 166 G~ial~~a~~~Pe~-~~~l~~~I~laP~~~~ 195 (552)
|.+++.++....+. ...+.++++++|....
T Consensus 82 g~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 82 GHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred cchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999765432 2358888999996654
No 113
>KOG2931|consensus
Probab=98.79 E-value=1.7e-06 Score=88.52 Aligned_cols=141 Identities=18% Similarity=0.247 Sum_probs=95.2
Q ss_pred CCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccC
Q psy3848 8 GYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVA 87 (552)
Q Consensus 8 g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (552)
|-++.++.|.|.-|. +|..-+|.. ++.||++|=.|.++.+....... -++
T Consensus 19 ~~~~~e~~V~T~~G~---v~V~V~Gd~---~~~kpaiiTyhDlglN~~scFq~------------------------ff~ 68 (326)
T KOG2931|consen 19 GATCQEHDVETAHGV---VHVTVYGDP---KGNKPAIITYHDLGLNHKSCFQG------------------------FFN 68 (326)
T ss_pred CCcceeeeecccccc---EEEEEecCC---CCCCceEEEecccccchHhHhHH------------------------hhc
Confidence 445788999999983 333323321 14688899999999988763320 012
Q ss_pred CCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHH
Q psy3848 88 GPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTT 167 (552)
Q Consensus 88 ~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ 167 (552)
.|+ +..+.++ |.|+-+|.+|+-.-.. .-|.+ |---|+++++ +.|-.+++.++.+.++-+|--.|+.
T Consensus 69 ~p~---m~ei~~~-fcv~HV~~PGqe~gAp---~~p~~--y~yPsmd~LA-----d~l~~VL~~f~lk~vIg~GvGAGAy 134 (326)
T KOG2931|consen 69 FPD---MAEILEH-FCVYHVDAPGQEDGAP---SFPEG--YPYPSMDDLA-----DMLPEVLDHFGLKSVIGMGVGAGAY 134 (326)
T ss_pred CHh---HHHHHhh-eEEEecCCCccccCCc---cCCCC--CCCCCHHHHH-----HHHHHHHHhcCcceEEEecccccHH
Confidence 333 4445554 9999999999753321 12221 1123455554 7888888899999999999999999
Q ss_pred HHHHHHHcCCcchhchheeeeccccccc
Q psy3848 168 MFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 168 ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
|...+|..||+ +|.|+|++.+....
T Consensus 135 IL~rFAl~hp~---rV~GLvLIn~~~~a 159 (326)
T KOG2931|consen 135 ILARFALNHPE---RVLGLVLINCDPCA 159 (326)
T ss_pred HHHHHHhcChh---heeEEEEEecCCCC
Confidence 99999999995 46666777765543
No 114
>KOG3043|consensus
Probab=98.79 E-value=1.8e-08 Score=99.26 Aligned_cols=72 Identities=19% Similarity=0.263 Sum_probs=57.4
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCcc--ceEEEeCCCCcccccc---------cccchHHHHHHHHHHH
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVG--LFKVNFTYFNHLDFLW---------AKDVKALVYNDLLLVL 447 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~--~~~v~~~~~gH~~~l~---------~~~~~~~V~~~il~fL 447 (552)
+.+++++||||+.|+.|.++|++.+..+.+.+.+... .+..++++.+| +|+- .+.+.++.|..+++|+
T Consensus 159 D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~H-Gf~~~r~~~~~Ped~~~~eea~~~~~~Wf 237 (242)
T KOG3043|consen 159 DIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGH-GFVARRANISSPEDKKAAEEAYQRFISWF 237 (242)
T ss_pred HHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccc-hhhhhccCCCChhHHHHHHHHHHHHHHHH
Confidence 5667789999999999999999999888887764331 34778999999 5552 2356788999999999
Q ss_pred Hhhc
Q psy3848 448 KTFS 451 (552)
Q Consensus 448 ~~~~ 451 (552)
+++.
T Consensus 238 ~~y~ 241 (242)
T KOG3043|consen 238 KHYL 241 (242)
T ss_pred HHhh
Confidence 9874
No 115
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.75 E-value=1.3e-07 Score=96.13 Aligned_cols=106 Identities=22% Similarity=0.317 Sum_probs=74.2
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
+.=|+|||+||+... ..|+. ++.+.+|..||-|+++|+...+....
T Consensus 15 g~yPVv~f~~G~~~~-~s~Ys--------------------------------~ll~hvAShGyIVV~~d~~~~~~~~~- 60 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLI-NSWYS--------------------------------QLLEHVASHGYIVVAPDLYSIGGPDD- 60 (259)
T ss_pred CCcCEEEEeCCcCCC-HHHHH--------------------------------HHHHHHHhCceEEEEecccccCCCCc-
Confidence 677999999999944 44443 49999999999999999765332110
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHH----------cCCCcEEEEEechhHHHHHHHHHcCCc--chhchhee
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK----------TDHTQMIYIGHSMGTTMFYVLTSQRPE--YNEKLLGA 186 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~----------~g~~ki~lVGHSmGG~ial~~a~~~Pe--~~~~l~~~ 186 (552)
-.+.. ++.+.++++.+. .+..++.+.|||-||-+++.++..+-+ ...++.++
T Consensus 61 --------------~~~~~--~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~al 124 (259)
T PF12740_consen 61 --------------TDEVA--SAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSAL 124 (259)
T ss_pred --------------chhHH--HHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEE
Confidence 01111 344555555432 245689999999999999999987621 12468888
Q ss_pred eecccccc
Q psy3848 187 ISLAPVAY 194 (552)
Q Consensus 187 I~laP~~~ 194 (552)
+++.|+.-
T Consensus 125 i~lDPVdG 132 (259)
T PF12740_consen 125 ILLDPVDG 132 (259)
T ss_pred EEeccccc
Confidence 89998873
No 116
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.73 E-value=1.1e-08 Score=101.69 Aligned_cols=92 Identities=29% Similarity=0.312 Sum_probs=59.3
Q ss_pred CcEEEEeCCCCC-CCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCce---EEEEcCCCCCCCC
Q psy3848 41 KEVVFLQHGVFG-SSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYD---VWLGNARGNTYSR 116 (552)
Q Consensus 41 ~~~VlLlHG~~~-ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~---Via~D~RG~G~S~ 116 (552)
+.||||+||..+ ....|.. +++.|+++||. |+++++-....+.
T Consensus 1 ~~PVVlVHG~~~~~~~~w~~---------------------------------~~~~l~~~GY~~~~vya~tyg~~~~~~ 47 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNWST---------------------------------LAPYLKAAGYCDSEVYALTYGSGNGSP 47 (219)
T ss_dssp S--EEEE--TTTTTCGGCCH---------------------------------HHHHHHHTT--CCCEEEE--S-CCHHT
T ss_pred CCCEEEECCCCcchhhCHHH---------------------------------HHHHHHHcCCCcceeEeccCCCCCCCC
Confidence 359999999998 6678888 99999999999 8999984222111
Q ss_pred CCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcC
Q psy3848 117 SHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQR 176 (552)
Q Consensus 117 ~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~ 176 (552)
.... .....+.+. .+.++|+.+++.+|- |+.||||||||+++..+....
T Consensus 48 -----~~~~----~~~~~~~~~-~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 48 -----SVQN----AHMSCESAK-QLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp -----HHHH----HHB-HHHHH-HHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC
T ss_pred -----cccc----cccchhhHH-HHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 0000 111122333 788999999999999 999999999999999887543
No 117
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.73 E-value=3.1e-07 Score=95.00 Aligned_cols=65 Identities=17% Similarity=0.098 Sum_probs=49.4
Q ss_pred cccEEEEEeCCCCCCCHHHHHHHHHhCCC-C-ccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhcccc
Q psy3848 384 STKVAFFYADNDLLTNEQDVKELYTLLPN-P-VGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKTR 454 (552)
Q Consensus 384 ~~PvLii~G~~D~i~p~~~~~~l~~~lp~-~-~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~~~~ 454 (552)
++|+++.+|..|.++|...++.+.+..+. . ..+.++.++..+|..-... -.++.+.||+.+-.++
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~------~~~~a~~Wl~~rf~G~ 285 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA------SAPDALAWLDDRFAGK 285 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc------CcHHHHHHHHHHHCCC
Confidence 68999999999999999999988887653 2 3456777888999864322 1467889998776543
No 118
>KOG2100|consensus
Probab=98.61 E-value=8.8e-07 Score=102.62 Aligned_cols=72 Identities=19% Similarity=0.074 Sum_probs=56.0
Q ss_pred CCCCccccE-EEEEeCCCCCCCHHHHHHHHHhCCC-CccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhcc
Q psy3848 379 DLKFISTKV-AFFYADNDLLTNEQDVKELYTLLPN-PVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSK 452 (552)
Q Consensus 379 ~l~~I~~Pv-Lii~G~~D~i~p~~~~~~l~~~lp~-~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~~ 452 (552)
.+.+++.|. |++||+.|..+..+.+..++++|.. .......++|+.+|- +...++...++..+..||..+-.
T Consensus 676 ~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~--is~~~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 676 PANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHG--ISYVEVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred hhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcc--cccccchHHHHHHHHHHHHHHcC
Confidence 455667676 9999999999999999998887753 222567889999997 33456668899999999985443
No 119
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.61 E-value=2.2e-07 Score=93.64 Aligned_cols=106 Identities=20% Similarity=0.225 Sum_probs=77.6
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
|.=|+|+|+||+......|.. +...++.+||-|+++++-.- .
T Consensus 44 G~yPVilF~HG~~l~ns~Ys~---------------------------------lL~HIASHGfIVVAPQl~~~--~--- 85 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSFYSQ---------------------------------LLAHIASHGFIVVAPQLYTL--F--- 85 (307)
T ss_pred CCccEEEEeechhhhhHHHHH---------------------------------HHHHHhhcCeEEEechhhcc--c---
Confidence 677999999999888666665 89999999999999999621 0
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHc----------CCCcEEEEEechhHHHHHHHHHcCCcchhchheeee
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT----------DHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAIS 188 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~----------g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~ 188 (552)
.|. ..+|+. +..+.++++.+-+ ++.++.++|||.||-.|+++|..+. ..-++.++|.
T Consensus 86 ---~p~-------~~~Ei~--~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a-~~lkfsaLIG 152 (307)
T PF07224_consen 86 ---PPD-------GQDEIK--SAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA-TSLKFSALIG 152 (307)
T ss_pred ---CCC-------chHHHH--HHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc-ccCchhheec
Confidence 111 123322 5556677665442 3568999999999999999999775 3356777777
Q ss_pred ccccccc
Q psy3848 189 LAPVAYL 195 (552)
Q Consensus 189 laP~~~~ 195 (552)
+.|+.-.
T Consensus 153 iDPV~G~ 159 (307)
T PF07224_consen 153 IDPVAGT 159 (307)
T ss_pred ccccCCC
Confidence 7776654
No 120
>KOG2565|consensus
Probab=98.58 E-value=1e-06 Score=92.35 Aligned_cols=97 Identities=20% Similarity=0.231 Sum_probs=76.4
Q ss_pred CcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhC---------CceEEEEcCCC
Q psy3848 41 KEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADK---------GYDVWLGNARG 111 (552)
Q Consensus 41 ~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~---------Gy~Via~D~RG 111 (552)
--||+++||++||-..+.. ++..|.+. -|.|++|.++|
T Consensus 152 v~PlLl~HGwPGsv~EFyk---------------------------------fIPlLT~p~~hg~~~d~~FEVI~PSlPG 198 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVREFYK---------------------------------FIPLLTDPKRHGNESDYAFEVIAPSLPG 198 (469)
T ss_pred ccceEEecCCCchHHHHHh---------------------------------hhhhhcCccccCCccceeEEEeccCCCC
Confidence 3589999999999988877 55556543 27899999999
Q ss_pred CCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhch
Q psy3848 112 NTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKL 183 (552)
Q Consensus 112 ~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l 183 (552)
+|.|+... .. .++-...+ ..+..+.-++|..++++=|-.+|+.|+-.+|+.+|+.+..+
T Consensus 199 ygwSd~~s-----k~---GFn~~a~A-----rvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 199 YGWSDAPS-----KT---GFNAAATA-----RVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred cccCcCCc-----cC---CccHHHHH-----HHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 99999533 22 34445455 56777778899999999999999999999999999654443
No 121
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.55 E-value=2.3e-06 Score=80.75 Aligned_cols=108 Identities=20% Similarity=0.115 Sum_probs=69.0
Q ss_pred CcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCC
Q psy3848 41 KEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHIS 120 (552)
Q Consensus 41 ~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~ 120 (552)
.-+|||.||.+++-++-.. +..+..|+.+|+.|..++++-.-.-+ .+.
T Consensus 14 ~~tilLaHGAGasmdSt~m-------------------------------~~~a~~la~~G~~vaRfefpYma~Rr-tg~ 61 (213)
T COG3571 14 PVTILLAHGAGASMDSTSM-------------------------------TAVAAALARRGWLVARFEFPYMAARR-TGR 61 (213)
T ss_pred CEEEEEecCCCCCCCCHHH-------------------------------HHHHHHHHhCceeEEEeecchhhhcc-ccC
Confidence 3478888999988876555 56889999999999999986321111 111
Q ss_pred CCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecc
Q psy3848 121 YSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLA 190 (552)
Q Consensus 121 ~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~la 190 (552)
..|.... .---.++. ..+.+++..+...++++-||||||-++.+.+..-. ..|.++++++
T Consensus 62 rkPp~~~--~t~~~~~~-----~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~---A~i~~L~clg 121 (213)
T COG3571 62 RKPPPGS--GTLNPEYI-----VAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQ---APIDGLVCLG 121 (213)
T ss_pred CCCcCcc--ccCCHHHH-----HHHHHHHhcccCCceeeccccccchHHHHHHHhhc---CCcceEEEec
Confidence 1121110 11122333 55666766665568999999999999998885433 3355555544
No 122
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.55 E-value=3.2e-06 Score=87.43 Aligned_cols=88 Identities=18% Similarity=0.175 Sum_probs=61.6
Q ss_pred HHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHc---C--CCcEEEEEechhHH
Q psy3848 93 LAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT---D--HTQMIYIGHSMGTT 167 (552)
Q Consensus 93 la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~---g--~~ki~lVGHSmGG~ 167 (552)
++..++..|+.|+.+|+| +.|.. .+..... |+.+.+.++.+.. + .+++.++|+|.||.
T Consensus 102 ~~~~~~~~g~~vv~vdYr----------laPe~------~~p~~~~-d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~ 164 (312)
T COG0657 102 VARLAAAAGAVVVSVDYR----------LAPEH------PFPAALE-DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGH 164 (312)
T ss_pred HHHHHHHcCCEEEecCCC----------CCCCC------CCCchHH-HHHHHHHHHHhhhHhhCCCccceEEEecCcccH
Confidence 566677789999999999 23332 2333333 6668888888663 3 56899999999999
Q ss_pred HHHHHHHcCCcc-hhchheeeeccccccccC
Q psy3848 168 MFYVLTSQRPEY-NEKLLGAISLAPVAYLSR 197 (552)
Q Consensus 168 ial~~a~~~Pe~-~~~l~~~I~laP~~~~~~ 197 (552)
+++.++..-.+. .......+++.|......
T Consensus 165 La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 165 LALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred HHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 999998764432 224567778888766544
No 123
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.50 E-value=2.9e-07 Score=100.38 Aligned_cols=89 Identities=17% Similarity=0.159 Sum_probs=70.9
Q ss_pred HHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHH
Q psy3848 92 ALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYV 171 (552)
Q Consensus 92 ~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~ 171 (552)
.+++.|++.||.+ ..|++|+|++.+... ..+++.. ++.+.|+.+.++.+..++++|||||||.+++.
T Consensus 112 ~li~~L~~~GY~~-~~dL~g~gYDwR~~~-----------~~~~~~~-~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 112 DMIEQLIKWGYKE-GKTLFGFGYDFRQSN-----------RLPETMD-GLKKKLETVYKASGGKKVNIISHSMGGLLVKC 178 (440)
T ss_pred HHHHHHHHcCCcc-CCCcccCCCCccccc-----------cHHHHHH-HHHHHHHHHHHHcCCCCEEEEEECHhHHHHHH
Confidence 4788899999866 889999999975321 1233443 77799999998888899999999999999999
Q ss_pred HHHcCCcch-hchheeeeccccc
Q psy3848 172 LTSQRPEYN-EKLLGAISLAPVA 193 (552)
Q Consensus 172 ~a~~~Pe~~-~~l~~~I~laP~~ 193 (552)
++..+|+.. +.|..+|++|++.
T Consensus 179 fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 179 FMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHCCHhHHhHhccEEEECCCC
Confidence 999999754 4467778887754
No 124
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.49 E-value=3.1e-05 Score=85.29 Aligned_cols=147 Identities=12% Similarity=0.051 Sum_probs=85.9
Q ss_pred CcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhC
Q psy3848 21 GYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADK 100 (552)
Q Consensus 21 G~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~ 100 (552)
+..+.++.++... .+.+.|+||+++|.+|.+..+.. -...|--. |..+ + ...+.+... ..+.
T Consensus 60 ~~~lFyw~~~s~~---~~~~~Pl~lwlnGGPG~ss~~G~---f~E~GP~~-i~~~-~----~~~~~n~~s------W~~~ 121 (462)
T PTZ00472 60 DKHYFYWAFGPRN---GNPEAPVLLWMTGGPGCSSMFAL---LAENGPCL-MNET-T----GDIYNNTYS------WNNE 121 (462)
T ss_pred CceEEEEEEEcCC---CCCCCCEEEEECCCCcHHHHHhh---hccCCCeE-EeCC-C----CceeECCcc------cccc
Confidence 5677777776432 13567999999999998876422 11222111 1111 0 011122111 2232
Q ss_pred CceEEEEcC-CCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC---CCcEEEEEechhHHHHHHHHHcC
Q psy3848 101 GYDVWLGNA-RGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD---HTQMIYIGHSMGTTMFYVLTSQR 176 (552)
Q Consensus 101 Gy~Via~D~-RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g---~~ki~lVGHSmGG~ial~~a~~~ 176 (552)
..|+.+|. +|+|.|..... +. ..+.++.+. |+.+++..+.++.. ..+++++||||||..+-.+|.+-
T Consensus 122 -~~~l~iDqP~G~G~S~~~~~----~~---~~~~~~~a~-d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i 192 (462)
T PTZ00472 122 -AYVIYVDQPAGVGFSYADKA----DY---DHNESEVSE-DMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRI 192 (462)
T ss_pred -cCeEEEeCCCCcCcccCCCC----CC---CCChHHHHH-HHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHH
Confidence 47888886 69999974221 11 234456665 77788877765543 47899999999999998888753
Q ss_pred Ccc-------hhchheeeecccccc
Q psy3848 177 PEY-------NEKLLGAISLAPVAY 194 (552)
Q Consensus 177 Pe~-------~~~l~~~I~laP~~~ 194 (552)
-+. .-.++|+++-.|...
T Consensus 193 ~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 193 NMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred HhhccccCCceeeeEEEEEeccccC
Confidence 211 124667665555443
No 125
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.47 E-value=1.2e-06 Score=86.50 Aligned_cols=50 Identities=20% Similarity=0.429 Sum_probs=39.4
Q ss_pred HHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 142 PAEIDFILNKTDH--TQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 142 ~a~I~~I~~~~g~--~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
..++++++++-.. +++.++|.|.||-+|+.+|+.+| .|.++|+++|....
T Consensus 7 e~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~----~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 7 EEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP----QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS----SEEEEEEES--SB-
T ss_pred HHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC----CccEEEEeCCceeE
Confidence 3788888876554 58999999999999999999998 57777888886654
No 126
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.40 E-value=7.6e-06 Score=83.35 Aligned_cols=122 Identities=16% Similarity=0.195 Sum_probs=70.0
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHH-hCCc--eEEEE--cCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLA-DKGY--DVWLG--NARGNT 113 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La-~~Gy--~Via~--D~RG~G 113 (552)
....|.||+||++++...+.. ++..+. ++|. .|+.. +.-|.=
T Consensus 9 ~~~tPTifihG~~gt~~s~~~---------------------------------mi~~~~~~~~~~~~~l~v~V~~~G~v 55 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSFNH---------------------------------MINRLENKQGVAQKVLTVTVSKNGKV 55 (255)
T ss_dssp -S-EEEEEE--TTGGCCCCHH---------------------------------HHHHHHHCSTS-S-EEEEEEETTSEE
T ss_pred cCCCcEEEECCCCCChhHHHH---------------------------------HHHHHHhhcCCCceEEEEEECCCCeE
Confidence 356799999999999888877 888886 6553 33333 333321
Q ss_pred CCCCCC---CCCCCcc-ccc-cc--ChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcc--hhchh
Q psy3848 114 YSRSHI---SYSPMDL-AFW-DF--SFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEY--NEKLL 184 (552)
Q Consensus 114 ~S~~~~---~~sp~~~-~~~-~~--s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~--~~~l~ 184 (552)
.-.+.. ...|.-. .|- +. ++...+. =+...+.++.++++++++.+|||||||..++.|+..+... .-+|.
T Consensus 56 ~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~-wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~ 134 (255)
T PF06028_consen 56 KVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK-WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLN 134 (255)
T ss_dssp EEES---TT-SS-EEEEEESSTT-CHHHHHHH-HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEE
T ss_pred EEeeecCCCCCCCEEEEEecCCCcCCHHHHHH-HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccc
Confidence 111110 0012100 010 11 2444443 5668889999999999999999999999999999886432 12566
Q ss_pred eeeecccccc
Q psy3848 185 GAISLAPVAY 194 (552)
Q Consensus 185 ~~I~laP~~~ 194 (552)
-+|++|.+..
T Consensus 135 K~V~Ia~pfn 144 (255)
T PF06028_consen 135 KLVTIAGPFN 144 (255)
T ss_dssp EEEEES--TT
T ss_pred eEEEeccccC
Confidence 6677775443
No 127
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.36 E-value=1.1e-06 Score=88.09 Aligned_cols=116 Identities=20% Similarity=0.114 Sum_probs=76.9
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCc--eEEEEcCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGY--DVWLGNARGNTYSR 116 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy--~Via~D~RG~G~S~ 116 (552)
..++++|++||+..+-..-.. ..++...+.|+ .|+++.|++.|.-.
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~--------------------------------r~aql~~~~~~~~~~i~FsWPS~g~~~ 63 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALR--------------------------------RAAQLAHDLGFPGVVILFSWPSDGSLL 63 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHH--------------------------------HHHHHHHHhCCCceEEEEEcCCCCChh
Confidence 568999999999877544322 24555555455 69999999776422
Q ss_pred CCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCC------cchhchheeeecc
Q psy3848 117 SHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRP------EYNEKLLGAISLA 190 (552)
Q Consensus 117 ~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~P------e~~~~l~~~I~la 190 (552)
. +... . .-......++.+.|..+.+..+.+++++++||||+.+.+....... +...++..+|+++
T Consensus 64 ~---Y~~d-~-----~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~A 134 (233)
T PF05990_consen 64 G---YFYD-R-----ESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAA 134 (233)
T ss_pred h---hhhh-h-----hhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEEC
Confidence 1 1111 0 1112233366678888887778899999999999999988765421 2334677888888
Q ss_pred ccccc
Q psy3848 191 PVAYL 195 (552)
Q Consensus 191 P~~~~ 195 (552)
|-...
T Consensus 135 pDid~ 139 (233)
T PF05990_consen 135 PDIDN 139 (233)
T ss_pred CCCCH
Confidence 86654
No 128
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.35 E-value=2e-05 Score=83.00 Aligned_cols=102 Identities=15% Similarity=0.091 Sum_probs=67.9
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHH-HHHHHhCCceEEEEcCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTAL-AYLLADKGYDVWLGNARGNTYSRS 117 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-a~~La~~Gy~Via~D~RG~G~S~~ 117 (552)
..+|++|.+.|.+.+. .|+. +.+ |..|.+.|+..+.+-.+=||.=+.
T Consensus 90 ~~rp~~IhLagTGDh~-f~rR-------------------------------~~l~a~pLl~~gi~s~~le~Pyyg~RkP 137 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHG-FWRR-------------------------------RRLMARPLLKEGIASLILENPYYGQRKP 137 (348)
T ss_pred CCCceEEEecCCCccc-hhhh-------------------------------hhhhhhHHHHcCcceEEEecccccccCh
Confidence 4689999999976644 4444 234 888888899999999997775432
Q ss_pred CCCCCCCcccccccChhhhh------hccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCc
Q psy3848 118 HISYSPMDLAFWDFSFHEMG------YFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPE 178 (552)
Q Consensus 118 ~~~~sp~~~~~~~~s~~~~~------~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe 178 (552)
... .-.. -.+..|+. ..+....+.++.++ |..++.+.|.||||.+|...|+..|.
T Consensus 138 ~~Q-~~s~----l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~ 198 (348)
T PF09752_consen 138 KDQ-RRSS----LRNVSDLFVMGRATILESRALLHWLERE-GYGPLGLTGISMGGHMAALAASNWPR 198 (348)
T ss_pred hHh-hccc----ccchhHHHHHHhHHHHHHHHHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCCC
Confidence 211 0000 00111111 11444555666665 88899999999999999999999994
No 129
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.35 E-value=2.9e-06 Score=91.01 Aligned_cols=40 Identities=35% Similarity=0.439 Sum_probs=28.1
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARG 111 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG 111 (552)
++-|+|||-||++++...+.. ++..||.+||-|+++|+|.
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~---------------------------------~~~eLAS~GyVV~aieHrD 137 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSA---------------------------------ICGELASHGYVVAAIEHRD 137 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHH---------------------------------HHHHHHHTT-EEEEE---S
T ss_pred CCCCEEEEeCCCCcchhhHHH---------------------------------HHHHHHhCCeEEEEeccCC
Confidence 456899999999999999877 9999999999999999994
No 130
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.31 E-value=2.7e-06 Score=89.81 Aligned_cols=100 Identities=23% Similarity=0.243 Sum_probs=71.5
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCC--CCCCC
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGN--TYSRS 117 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~--G~S~~ 117 (552)
..|.|+|-||.+.....+.. +++.|++.||-|.++|++|- |....
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~---------------------------------~A~~lAs~Gf~Va~~~hpgs~~~~~~~ 116 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAW---------------------------------LAEHLASYGFVVAAPDHPGSNAGGAPA 116 (365)
T ss_pred cCCeEEecCCCCCCccchhh---------------------------------hHHHHhhCceEEEeccCCCcccccCCh
Confidence 57899999999999887777 89999999999999999983 22222
Q ss_pred CCCC--CCCcccccccChhhhhhccHHHHHHHHHHH---------cCCCcEEEEEechhHHHHHHHHHcCCc
Q psy3848 118 HISY--SPMDLAFWDFSFHEMGYFDLPAEIDFILNK---------TDHTQMIYIGHSMGTTMFYVLTSQRPE 178 (552)
Q Consensus 118 ~~~~--sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~---------~g~~ki~lVGHSmGG~ial~~a~~~Pe 178 (552)
+... ++...+|| +.-. |+...|+++.+. ++..+|-++|||.||.-++.++.-+.+
T Consensus 117 ~~~~~~~~~p~~~~----erp~--dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 117 AYAGPGSYAPAEWW----ERPL--DISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hhcCCcccchhhhh----cccc--cHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 1110 00111222 2222 788888887765 335689999999999999998866553
No 131
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.31 E-value=2.3e-05 Score=75.08 Aligned_cols=63 Identities=13% Similarity=0.018 Sum_probs=51.6
Q ss_pred ccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHh
Q psy3848 383 ISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 449 (552)
Q Consensus 383 I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~ 449 (552)
..-|.+++.+++|++++.+.++.+.+..++. ++...+.||+---.+-....+.+..+.+++.+
T Consensus 116 lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~----lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 116 LPFPSVVVASRNDPYVSYEHAEDLANAWGSA----LVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred CCCceeEEEecCCCCCCHHHHHHHHHhccHh----heecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 3459999999999999999999999999874 56678889986655667777788887777754
No 132
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.31 E-value=1.2e-06 Score=106.47 Aligned_cols=104 Identities=16% Similarity=0.126 Sum_probs=77.1
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
+.+++++++||++++...|.. ++..|.. +++|++++.+|+|.+...
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~---------------------------------l~~~l~~-~~~v~~~~~~g~~~~~~~ 1111 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSV---------------------------------LSRYLDP-QWSIYGIQSPRPDGPMQT 1111 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHH---------------------------------HHHhcCC-CCcEEEEECCCCCCCCCC
Confidence 346889999999999999988 8888866 699999999999855310
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
.+++++++. ++.+.++ ......+++++||||||.+++.+|.+.++..+++..++++++
T Consensus 1112 -----------~~~l~~la~-~~~~~i~---~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1112 -----------ATSLDEVCE-AHLATLL---EQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred -----------CCCHHHHHH-HHHHHHH---hhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 357888885 4444333 222335899999999999999999875444456666666654
No 133
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.25 E-value=1.2e-05 Score=78.12 Aligned_cols=90 Identities=19% Similarity=0.242 Sum_probs=72.1
Q ss_pred cHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHH
Q psy3848 90 DTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMF 169 (552)
Q Consensus 90 ~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ia 169 (552)
++.++..|+++|+.|+.+|-+=+=.+. -|-++.+. |+.+.|++..++.+..+++|||.|+|+-+.
T Consensus 18 d~~~a~~l~~~G~~VvGvdsl~Yfw~~--------------rtP~~~a~-Dl~~~i~~y~~~w~~~~vvLiGYSFGADvl 82 (192)
T PF06057_consen 18 DKQIAEALAKQGVPVVGVDSLRYFWSE--------------RTPEQTAA-DLARIIRHYRARWGRKRVVLIGYSFGADVL 82 (192)
T ss_pred hHHHHHHHHHCCCeEEEechHHHHhhh--------------CCHHHHHH-HHHHHHHHHHHHhCCceEEEEeecCCchhH
Confidence 456999999999999999987444433 23456665 888999999999999999999999999888
Q ss_pred HHHHHcCCc-chhchheeeecccccc
Q psy3848 170 YVLTSQRPE-YNEKLLGAISLAPVAY 194 (552)
Q Consensus 170 l~~a~~~Pe-~~~~l~~~I~laP~~~ 194 (552)
-...-+-|. ..++|..+++++|...
T Consensus 83 P~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 83 PFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred HHHHhhCCHHHHhheeEEEEeccCCc
Confidence 777777774 4578888888888554
No 134
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.21 E-value=7.9e-06 Score=81.49 Aligned_cols=99 Identities=21% Similarity=0.338 Sum_probs=66.8
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHh-CCceEEEEcCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLAD-KGYDVWLGNARGNTYSRS 117 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~-~Gy~Via~D~RG~G~S~~ 117 (552)
++.|.||++||.+++...+.. .. .+. .|++ .||-|+.|+.......
T Consensus 14 ~~~PLVv~LHG~~~~a~~~~~---------------------------~s---~~~-~lAd~~GfivvyP~~~~~~~~-- 60 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQSAEDFAA---------------------------GS---GWN-ALADREGFIVVYPEQSRRANP-- 60 (220)
T ss_pred CCCCEEEEeCCCCCCHHHHHh---------------------------hc---CHH-HHhhcCCeEEEcccccccCCC--
Confidence 356899999999998887665 11 122 3554 5899999985421100
Q ss_pred CCCCCCCccccccc-------ChhhhhhccHHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHcCCcch
Q psy3848 118 HISYSPMDLAFWDF-------SFHEMGYFDLPAEIDFILNKTDHT--QMIYIGHSMGTTMFYVLTSQRPEYN 180 (552)
Q Consensus 118 ~~~~sp~~~~~~~~-------s~~~~~~~Dl~a~I~~I~~~~g~~--ki~lVGHSmGG~ial~~a~~~Pe~~ 180 (552)
...|++ .-.|.. .+.++|+++..+++++ ++++.|+|.||+|+..+++.+||+.
T Consensus 61 --------~~cw~w~~~~~~~g~~d~~--~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~f 122 (220)
T PF10503_consen 61 --------QGCWNWFSDDQQRGGGDVA--FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLF 122 (220)
T ss_pred --------CCcccccccccccCccchh--hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccc
Confidence 112221 112222 4567788888877765 8999999999999999999999653
No 135
>KOG4627|consensus
Probab=98.18 E-value=2.9e-05 Score=76.13 Aligned_cols=84 Identities=19% Similarity=0.243 Sum_probs=58.7
Q ss_pred HHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCC-cEEEEEechhHHHHHH
Q psy3848 93 LAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHT-QMIYIGHSMGTTMFYV 171 (552)
Q Consensus 93 la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~-ki~lVGHSmGG~ial~ 171 (552)
.+..+..+||+|...++ +++. . +-++.+... ++...+++|++.+... .+.+.|||.|+.+++.
T Consensus 89 iv~~a~~~gY~vasvgY---~l~~-------q-----~htL~qt~~-~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~q 152 (270)
T KOG4627|consen 89 IVGPAVRRGYRVASVGY---NLCP-------Q-----VHTLEQTMT-QFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQ 152 (270)
T ss_pred hhhhhhhcCeEEEEecc---CcCc-------c-----cccHHHHHH-HHHHHHHHHHHhcccceeEEEcccchHHHHHHH
Confidence 45567778999998765 4443 2 234555554 7778999999888754 4777899999999998
Q ss_pred HHHcCCcchhchheeeecccccc
Q psy3848 172 LTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 172 ~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
...+. +..+|.|+++++....
T Consensus 153 av~R~--r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 153 AVMRQ--RSPRIWGLILLCGVYD 173 (270)
T ss_pred HHHHh--cCchHHHHHHHhhHhh
Confidence 88763 2356777665555443
No 136
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.15 E-value=2.1e-05 Score=80.78 Aligned_cols=122 Identities=21% Similarity=0.257 Sum_probs=81.2
Q ss_pred CCcEEEEEE-EcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHH
Q psy3848 20 DGYLLEIHR-IPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLA 98 (552)
Q Consensus 20 DG~~L~~~~-i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La 98 (552)
+|....++. .|.+.+ .+.|.||++||..++...... .+. +- .|+
T Consensus 43 ~g~~r~y~l~vP~g~~----~~apLvv~LHG~~~sgag~~~---------------------~sg---------~d-~lA 87 (312)
T COG3509 43 NGLKRSYRLYVPPGLP----SGAPLVVVLHGSGGSGAGQLH---------------------GTG---------WD-ALA 87 (312)
T ss_pred CCCccceEEEcCCCCC----CCCCEEEEEecCCCChHHhhc---------------------ccc---------hh-hhh
Confidence 344444443 455543 455899999999999887766 011 22 244
Q ss_pred h-CCceEEEEcCCCCCCCCCC--C--CCCCCcccccccChhhhhhccHHHHHHHHHHHcCCC--cEEEEEechhHHHHHH
Q psy3848 99 D-KGYDVWLGNARGNTYSRSH--I--SYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHT--QMIYIGHSMGTTMFYV 171 (552)
Q Consensus 99 ~-~Gy~Via~D~RG~G~S~~~--~--~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~--ki~lVGHSmGG~ial~ 171 (552)
+ .||-|..+|-- ..+.+. . ...|.+. ....+|.. +|.++++.+..+++++ ++++.|.|-||.|+..
T Consensus 88 d~~gFlV~yPdg~--~~~wn~~~~~~~~~p~~~---~~g~ddVg--flr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~ 160 (312)
T COG3509 88 DREGFLVAYPDGY--DRAWNANGCGNWFGPADR---RRGVDDVG--FLRALVAKLVNEYGIDPARVYVTGLSNGGRMANR 160 (312)
T ss_pred cccCcEEECcCcc--ccccCCCcccccCCcccc---cCCccHHH--HHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHH
Confidence 4 59999999532 222110 0 0012221 23456777 7889999999999988 8999999999999999
Q ss_pred HHHcCCcchhch
Q psy3848 172 LTSQRPEYNEKL 183 (552)
Q Consensus 172 ~a~~~Pe~~~~l 183 (552)
+++.+|+....+
T Consensus 161 lac~~p~~faa~ 172 (312)
T COG3509 161 LACEYPDIFAAI 172 (312)
T ss_pred HHhcCcccccce
Confidence 999999764444
No 137
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.14 E-value=2.9e-06 Score=83.54 Aligned_cols=45 Identities=16% Similarity=0.059 Sum_probs=31.6
Q ss_pred CCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcc
Q psy3848 380 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHL 427 (552)
Q Consensus 380 l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~ 427 (552)
-..|++|+|.++|++|.+++++.++.+++...+.. .+.....||.
T Consensus 157 ~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~---~v~~h~gGH~ 201 (212)
T PF03959_consen 157 EPKISIPTLHVIGENDPVVPPERSEALAEMFDPDA---RVIEHDGGHH 201 (212)
T ss_dssp -TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHE---EEEEESSSSS
T ss_pred cccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCc---EEEEECCCCc
Confidence 34578999999999999999999999999877632 4445677886
No 138
>KOG1515|consensus
Probab=98.10 E-value=0.00026 Score=74.91 Aligned_cols=88 Identities=20% Similarity=0.288 Sum_probs=61.1
Q ss_pred HHHHHHH-hCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHH------cCCCcEEEEEech
Q psy3848 92 ALAYLLA-DKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK------TDHTQMIYIGHSM 164 (552)
Q Consensus 92 ~la~~La-~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~------~g~~ki~lVGHSm 164 (552)
.+...++ +.+.-|+.+|+| . .|... | .-.++ |..+++.++.+. .+.++++++|-|-
T Consensus 113 ~~~~~~a~~~~~vvvSVdYR---L-------APEh~-~-Pa~y~-----D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSa 175 (336)
T KOG1515|consen 113 SFCTRLAAELNCVVVSVDYR---L-------APEHP-F-PAAYD-----DGWAALKWVLKNSWLKLGADPSRVFLAGDSA 175 (336)
T ss_pred HHHHHHHHHcCeEEEecCcc---c-------CCCCC-C-Cccch-----HHHHHHHHHHHhHHHHhCCCcccEEEEccCc
Confidence 4666664 568899999999 2 33221 0 11233 555777777664 3456899999999
Q ss_pred hHHHHHHHHHcCCc---chhchheeeecccccccc
Q psy3848 165 GTTMFYVLTSQRPE---YNEKLLGAISLAPVAYLS 196 (552)
Q Consensus 165 GG~ial~~a~~~Pe---~~~~l~~~I~laP~~~~~ 196 (552)
||.+|..+|.+.-+ ..-+|.+.|++-|.....
T Consensus 176 GGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 176 GGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred cHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 99999999987542 236789999999976543
No 139
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.04 E-value=1e-05 Score=82.43 Aligned_cols=104 Identities=20% Similarity=0.141 Sum_probs=81.0
Q ss_pred cEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCC
Q psy3848 42 EVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISY 121 (552)
Q Consensus 42 ~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~ 121 (552)
+|||++||..|+...|.. |+..|... ..|+..+.+|.|.-..+
T Consensus 1 ~pLF~fhp~~G~~~~~~~---------------------------------L~~~l~~~-~~v~~l~a~g~~~~~~~--- 43 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAP---------------------------------LAAALGPL-LPVYGLQAPGYGAGEQP--- 43 (257)
T ss_pred CCEEEEcCCCCcHHHHHH---------------------------------HHHHhccC-ceeeccccCcccccccc---
Confidence 589999999999999988 88888885 89999999998742211
Q ss_pred CCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 122 SPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 122 sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
.-++++++. ..++.|+......+.+++|||+||.+|+..|.+--..-+.+.-++++.+...
T Consensus 44 --------~~~l~~~a~----~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 44 --------FASLDDMAA----AYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred --------cCCHHHHHH----HHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 235788886 6667777777778999999999999999999875433345666666665444
No 140
>KOG2281|consensus
Probab=98.04 E-value=0.00017 Score=80.29 Aligned_cols=146 Identities=23% Similarity=0.121 Sum_probs=89.9
Q ss_pred CceEEEEECCCCcEEEEEEEcCCCCCCCC-CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCC
Q psy3848 10 PAESYIVQTEDGYLLEIHRIPYGRKGRRS-GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAG 88 (552)
Q Consensus 10 p~e~~~V~t~DG~~L~~~~i~~~~~~~~~-g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (552)
|.|-+.+|+..|..+-.-.+.+.. -.. .+-|+|+.+.|.++-.-.... =||| .-.
T Consensus 612 p~eif~fqs~tg~~lYgmiyKPhn--~~pgkkYptvl~VYGGP~VQlVnns---------------fkgi-------~yl 667 (867)
T KOG2281|consen 612 PPEIFSFQSKTGLTLYGMIYKPHN--FQPGKKYPTVLNVYGGPGVQLVNNS---------------FKGI-------QYL 667 (867)
T ss_pred ChhheeeecCCCcEEEEEEEcccc--CCCCCCCceEEEEcCCCceEEeecc---------------ccce-------ehh
Confidence 446677899888777544433221 111 235899999998764432221 1222 111
Q ss_pred CcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhh---ccHHHHHHHHHHHcC---CCcEEEEEe
Q psy3848 89 PDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGY---FDLPAEIDFILNKTD---HTQMIYIGH 162 (552)
Q Consensus 89 p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~---~Dl~a~I~~I~~~~g---~~ki~lVGH 162 (552)
-...|+..||-||.+|.||... ..+.-. ..--..|+. .|=.+.+..+.+++| .+++.+-|+
T Consensus 668 ----R~~~LaslGy~Vv~IDnRGS~h----RGlkFE-----~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGW 734 (867)
T KOG2281|consen 668 ----RFCRLASLGYVVVFIDNRGSAH----RGLKFE-----SHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGW 734 (867)
T ss_pred ----hhhhhhhcceEEEEEcCCCccc----cchhhH-----HHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEecc
Confidence 2446889999999999998532 111100 000011221 144456667778875 568999999
Q ss_pred chhHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 163 SMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 163 SmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
|.||.++++..+++|+. .+.+|+-||+...
T Consensus 735 SYGGYLSlm~L~~~P~I---frvAIAGapVT~W 764 (867)
T KOG2281|consen 735 SYGGYLSLMGLAQYPNI---FRVAIAGAPVTDW 764 (867)
T ss_pred ccccHHHHHHhhcCcce---eeEEeccCcceee
Confidence 99999999999999954 5666777776654
No 141
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.02 E-value=9.5e-06 Score=80.37 Aligned_cols=41 Identities=22% Similarity=0.301 Sum_probs=26.7
Q ss_pred hhhhhhccHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHH
Q psy3848 133 FHEMGYFDLPAEIDFILNKTDH--TQMIYIGHSMGTTMFYVLTS 174 (552)
Q Consensus 133 ~~~~~~~Dl~a~I~~I~~~~g~--~ki~lVGHSmGG~ial~~a~ 174 (552)
++.++. .+.+.|....+.... .++++|||||||.++-.+..
T Consensus 55 I~~~g~-rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 55 IDVCGE-RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred hHHHHH-HHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 555564 444444444433333 48999999999999876555
No 142
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.98 E-value=6.1e-06 Score=87.07 Aligned_cols=113 Identities=20% Similarity=0.287 Sum_probs=66.4
Q ss_pred CCCcEEEEeCCCCCCC--ccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHH-Hh--CCceEEEEcCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSS--ADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLL-AD--KGYDVWLGNARGNT 113 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss--~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~L-a~--~Gy~Via~D~RG~G 113 (552)
.++|++|++||+.++. ..|.. .+...| .. .++.|++.||...
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~--------------------------------~~~~all~~~~~d~NVI~VDWs~~- 115 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQ--------------------------------DMIKALLQKDTGDYNVIVVDWSRG- 115 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHH--------------------------------HHHHHHHCC--S-EEEEEEE-HHH-
T ss_pred CCCCeEEEEcCcCCcccchhHHH--------------------------------HHHHHHHhhccCCceEEEEcchhh-
Confidence 4689999999999988 45655 355544 44 4799999999621
Q ss_pred CCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC--CCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 114 YSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD--HTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 114 ~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g--~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
+.. . +.-. .......+. .+..+|..+.+..+ .+++++||||+|+.+|-..+.+... ..+|.-++.|.|
T Consensus 116 -a~~-~-Y~~a-----~~n~~~vg~-~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~-~~ki~rItgLDP 185 (331)
T PF00151_consen 116 -ASN-N-YPQA-----VANTRLVGR-QLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKG-GGKIGRITGLDP 185 (331)
T ss_dssp -HSS---HHHH-----HHHHHHHHH-HHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT----SSEEEEES-
T ss_pred -ccc-c-ccch-----hhhHHHHHH-HHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccC-cceeeEEEecCc
Confidence 110 0 0000 011233333 55566777765544 5789999999999999988877664 346766777887
Q ss_pred ccc
Q psy3848 192 VAY 194 (552)
Q Consensus 192 ~~~ 194 (552)
+..
T Consensus 186 AgP 188 (331)
T PF00151_consen 186 AGP 188 (331)
T ss_dssp B-T
T ss_pred ccc
Confidence 654
No 143
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.97 E-value=5.1e-05 Score=77.95 Aligned_cols=41 Identities=20% Similarity=0.298 Sum_probs=32.7
Q ss_pred HHHHHcCCC--cEEEEEechhHHHHHHHHHcCCcchhchheeeecc
Q psy3848 147 FILNKTDHT--QMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLA 190 (552)
Q Consensus 147 ~I~~~~g~~--ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~la 190 (552)
.+.++++++ +++++|.|+||+.+++++.++|+ ..++++.+|
T Consensus 259 vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd---fFAaa~~ia 301 (387)
T COG4099 259 VLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD---FFAAAVPIA 301 (387)
T ss_pred HHhhccCcccceEEEEeecCcchhhHHHHHhCch---hhheeeeec
Confidence 556677765 79999999999999999999994 466655544
No 144
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.92 E-value=5.7e-05 Score=84.10 Aligned_cols=143 Identities=18% Similarity=0.188 Sum_probs=95.9
Q ss_pred ccCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccc
Q psy3848 6 RHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWV 85 (552)
Q Consensus 6 ~~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (552)
.+||-.....|.+.||..|....+.+... ++.|+++..+-++=....+..
T Consensus 14 ~~~~~~~~v~V~MRDGvrL~~dIy~Pa~~----g~~Pvll~~~~~Py~k~~~~~-------------------------- 63 (563)
T COG2936 14 YAGYIERDVMVPMRDGVRLAADIYRPAGA----GPLPVLLSRTRLPYRKRNGTF-------------------------- 63 (563)
T ss_pred ccceeeeeeeEEecCCeEEEEEEEccCCC----CCCceeEEeeccccccccccC--------------------------
Confidence 45566667899999999999877655422 567888888822222221111
Q ss_pred cCCCcHHHHH---HHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHc-CCCcEEEEE
Q psy3848 86 VAGPDTALAY---LLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT-DHTQMIYIG 161 (552)
Q Consensus 86 ~~~p~~~la~---~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~-g~~ki~lVG 161 (552)
.+...... .++.+||.|+..|.||.|.|.+... + -++ ++.. |-.+.|++|..+- ...++-.+|
T Consensus 64 --~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~--~------~~~-~E~~--Dg~D~I~Wia~QpWsNG~Vgm~G 130 (563)
T COG2936 64 --GPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFD--P------ESS-REAE--DGYDTIEWLAKQPWSNGNVGMLG 130 (563)
T ss_pred --cchhhcccccceeecCceEEEEecccccccCCcccc--e------ecc-cccc--chhHHHHHHHhCCccCCeeeeec
Confidence 00111222 5788899999999999999986432 1 112 2333 7778888887642 234899999
Q ss_pred echhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 162 HSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 162 HSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
-|.+|+..+.+|+..| ..|++++..++...
T Consensus 131 ~SY~g~tq~~~Aa~~p---PaLkai~p~~~~~D 160 (563)
T COG2936 131 LSYLGFTQLAAAALQP---PALKAIAPTEGLVD 160 (563)
T ss_pred ccHHHHHHHHHHhcCC---chheeecccccccc
Confidence 9999999999999877 46766665555443
No 145
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.86 E-value=2.7e-05 Score=82.27 Aligned_cols=106 Identities=26% Similarity=0.281 Sum_probs=78.0
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCce---EEEEcCCCCCCCC
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYD---VWLGNARGNTYSR 116 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~---Via~D~RG~G~S~ 116 (552)
...|++++||+.++...|.. +...++..|+. |+++++.+. .
T Consensus 58 ~~~pivlVhG~~~~~~~~~~---------------------------------~~~~~~~~g~~~~~~~~~~~~~~---~ 101 (336)
T COG1075 58 AKEPIVLVHGLGGGYGNFLP---------------------------------LDYRLAILGWLTNGVYAFELSGG---D 101 (336)
T ss_pred CCceEEEEccCcCCcchhhh---------------------------------hhhhhcchHHHhccccccccccc---C
Confidence 35699999999888888887 66677777877 999998855 1
Q ss_pred CCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 117 SHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 117 ~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
... + ....+. -+.+.|+.++..++.+++.++||||||.+...++...+.. .++...+.++++-.-
T Consensus 102 ~~~--~----------~~~~~~-ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~-~~V~~~~tl~tp~~G 166 (336)
T COG1075 102 GTY--S----------LAVRGE-QLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGA-NRVASVVTLGTPHHG 166 (336)
T ss_pred CCc--c----------ccccHH-HHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCcc-ceEEEEEEeccCCCC
Confidence 111 1 111221 3447888888888989999999999999999888887743 566777777765543
No 146
>PRK04940 hypothetical protein; Provisional
Probab=97.78 E-value=0.0011 Score=64.10 Aligned_cols=52 Identities=13% Similarity=-0.031 Sum_probs=38.1
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHH
Q psy3848 387 VAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 448 (552)
Q Consensus 387 vLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~ 448 (552)
.+++..+.|.+.+.+.+...+...- . ..+.++..|- | ...++..+.|++|++
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~~~y--~---~~v~~GGdH~-f----~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELHPYY--E---IVWDEEQTHK-F----KNISPHLQRIKAFKT 178 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhccCc--e---EEEECCCCCC-C----CCHHHHHHHHHHHHh
Confidence 4889999999999888765553321 2 4556777774 4 577889999999984
No 147
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.73 E-value=7.6e-05 Score=74.06 Aligned_cols=50 Identities=22% Similarity=0.227 Sum_probs=36.7
Q ss_pred HHHHHHHHcCCC--cEEEEEechhHHHHHHHHHcCCcchhchheeeecccccccc
Q psy3848 144 EIDFILNKTDHT--QMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLS 196 (552)
Q Consensus 144 ~I~~I~~~~g~~--ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~~ 196 (552)
.+.+|.+++... +..++|+||||..++.++.++|+. ..++++++|.....
T Consensus 102 l~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~---F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDL---FGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTT---ESEEEEESEESETT
T ss_pred chhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccc---cccccccCcccccc
Confidence 334444555533 279999999999999999999954 55667788776543
No 148
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.73 E-value=0.00056 Score=67.80 Aligned_cols=71 Identities=17% Similarity=0.121 Sum_probs=56.3
Q ss_pred CCCCcc-ccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHhh
Q psy3848 379 DLKFIS-TKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 450 (552)
Q Consensus 379 ~l~~I~-~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~ 450 (552)
.+.+|. +|+|+++|.+|.++|...+..+++..... .+....+++.+|.......+..++.+.++.+|+.+.
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER-PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC-CceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 455566 79999999999999999999999998883 225777899999876433344457899999999875
No 149
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.72 E-value=0.0004 Score=72.93 Aligned_cols=123 Identities=15% Similarity=0.174 Sum_probs=81.0
Q ss_pred ceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCc
Q psy3848 11 AESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPD 90 (552)
Q Consensus 11 ~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 90 (552)
..+..+|. ||+.+..-.+..... ....-|++.-|-++.-+.... +.+. +
T Consensus 112 ~kRv~Iq~-D~~~IDt~~I~~~~a----~~~RWiL~s~GNg~~~E~~~~------------------~~~~--------~ 160 (365)
T PF05677_consen 112 VKRVPIQY-DGVKIDTMAIHQPEA----KPQRWILVSNGNGECYENRAM------------------LDYK--------D 160 (365)
T ss_pred eeeEEEee-CCEEEEEEEeeCCCC----CCCcEEEEEcCChHHhhhhhh------------------hccc--------c
Confidence 34455555 998888766643211 345678888775443333111 0011 1
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHc-C--CCcEEEEEechhHH
Q psy3848 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT-D--HTQMIYIGHSMGTT 167 (552)
Q Consensus 91 ~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~-g--~~ki~lVGHSmGG~ 167 (552)
.++.....+.|-.|+++|+||.|.|.+.. +..+++. |..+++++++++- | .+++++-|||+||.
T Consensus 161 ~~~~~~ak~~~aNvl~fNYpGVg~S~G~~------------s~~dLv~-~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~ 227 (365)
T PF05677_consen 161 DWIQRFAKELGANVLVFNYPGVGSSTGPP------------SRKDLVK-DYQACVRYLRDEEQGPKAKNIILYGHSLGGG 227 (365)
T ss_pred HHHHHHHHHcCCcEEEECCCccccCCCCC------------CHHHHHH-HHHHHHHHHHhcccCCChheEEEeeccccHH
Confidence 12333344468899999999999998644 2467776 8889999998753 3 36899999999999
Q ss_pred HHHHHHHcCC
Q psy3848 168 MFYVLTSQRP 177 (552)
Q Consensus 168 ial~~a~~~P 177 (552)
++...+.++.
T Consensus 228 Vqa~AL~~~~ 237 (365)
T PF05677_consen 228 VQAEALKKEV 237 (365)
T ss_pred HHHHHHHhcc
Confidence 9888666554
No 150
>KOG2551|consensus
Probab=97.71 E-value=0.00092 Score=66.40 Aligned_cols=64 Identities=14% Similarity=0.118 Sum_probs=52.9
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhc
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFS 451 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~ 451 (552)
..+.|++|.|.|.|+.|.++|.+.++.|++..+++ .+.....||+- .+....-..|.+||+...
T Consensus 158 ~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a----~vl~HpggH~V-----P~~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 158 YKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA----TVLEHPGGHIV-----PNKAKYKEKIADFIQSFL 221 (230)
T ss_pred hccCCCCCeeEEecccceeecchHHHHHHHhcCCC----eEEecCCCccC-----CCchHHHHHHHHHHHHHH
Confidence 45578999999999999999999999999999997 45567889973 455567788888887765
No 151
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.68 E-value=0.00012 Score=69.02 Aligned_cols=83 Identities=17% Similarity=0.105 Sum_probs=55.5
Q ss_pred HHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHH
Q psy3848 93 LAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVL 172 (552)
Q Consensus 93 la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~ 172 (552)
++..|.. ++.|+++|.+|+|.+... ..++++++. ..++.+....+..+++++||||||.+++..
T Consensus 18 ~~~~l~~-~~~v~~~~~~g~~~~~~~-----------~~~~~~~~~----~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~ 81 (212)
T smart00824 18 LAAALRG-RRDVSALPLPGFGPGEPL-----------PASADALVE----AQAEAVLRAAGGRPFVLVGHSSGGLLAHAV 81 (212)
T ss_pred HHHhcCC-CccEEEecCCCCCCCCCC-----------CCCHHHHHH----HHHHHHHHhcCCCCeEEEEECHHHHHHHHH
Confidence 7777776 589999999999865431 123444443 333445555556789999999999999998
Q ss_pred HHcCCcchhchheeeeccc
Q psy3848 173 TSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 173 a~~~Pe~~~~l~~~I~laP 191 (552)
+.+..+....+.+++++.+
T Consensus 82 a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 82 AARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHhCCCCCcEEEEEcc
Confidence 8864433234555555544
No 152
>KOG1553|consensus
Probab=97.55 E-value=0.0004 Score=72.70 Aligned_cols=129 Identities=19% Similarity=0.233 Sum_probs=81.7
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCCCCC-cEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCc
Q psy3848 12 ESYIVQTEDGYLLEIHRIPYGRKGRRSGKK-EVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPD 90 (552)
Q Consensus 12 e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~-~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 90 (552)
.+..+.+.||..+..-.+....+ ..+++ ..||+.-|= ...|.. |
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n--~~~ngq~LvIC~EGN---AGFYEv-----------------G------------- 259 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPN--QSGNGQDLVICFEGN---AGFYEV-----------------G------------- 259 (517)
T ss_pred eEEEEeecCCcchhheeecCCCC--CCCCCceEEEEecCC---ccceEe-----------------e-------------
Confidence 45677888887776655532211 12333 456666663 334443 1
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC--CCcEEEEEechhHHH
Q psy3848 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD--HTQMIYIGHSMGTTM 168 (552)
Q Consensus 91 ~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g--~~ki~lVGHSmGG~i 168 (552)
...-=++.||.|...+++|++.|.+-.. |.+ +.. -+.+.+.+..+.+| .+.+++.|+|.||.-
T Consensus 260 --~m~tP~~lgYsvLGwNhPGFagSTG~P~--p~n---------~~n--A~DaVvQfAI~~Lgf~~edIilygWSIGGF~ 324 (517)
T KOG1553|consen 260 --VMNTPAQLGYSVLGWNHPGFAGSTGLPY--PVN---------TLN--AADAVVQFAIQVLGFRQEDIILYGWSIGGFP 324 (517)
T ss_pred --eecChHHhCceeeccCCCCccccCCCCC--ccc---------chH--HHHHHHHHHHHHcCCCccceEEEEeecCCch
Confidence 1111334599999999999999986442 221 111 12245566666776 457999999999999
Q ss_pred HHHHHHcCCcchhchheeeecccccc
Q psy3848 169 FYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 169 al~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
+..+|+.+|+ +.++|+-|...+
T Consensus 325 ~~waAs~YPd----VkavvLDAtFDD 346 (517)
T KOG1553|consen 325 VAWAASNYPD----VKAVVLDATFDD 346 (517)
T ss_pred HHHHhhcCCC----ceEEEeecchhh
Confidence 9999999995 666666665443
No 153
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.54 E-value=0.00034 Score=73.86 Aligned_cols=113 Identities=19% Similarity=0.212 Sum_probs=78.4
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCce--EEEEcCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYD--VWLGNARGNTYSR 116 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~--Via~D~RG~G~S~ 116 (552)
..|.+++|+||+..+=.+=.. -+++...+.|+. .+++-|+-.|.--
T Consensus 114 ~~k~vlvFvHGfNntf~dav~--------------------------------R~aqI~~d~g~~~~pVvFSWPS~g~l~ 161 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVY--------------------------------RTAQIVHDSGNDGVPVVFSWPSRGSLL 161 (377)
T ss_pred CCCeEEEEEcccCCchhHHHH--------------------------------HHHHHHhhcCCCcceEEEEcCCCCeee
Confidence 468899999998655432221 256677777764 6788888444221
Q ss_pred CCCCCCCCcccccccChh----hhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHc----CCc-chhchheee
Q psy3848 117 SHISYSPMDLAFWDFSFH----EMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQ----RPE-YNEKLLGAI 187 (552)
Q Consensus 117 ~~~~~sp~~~~~~~~s~~----~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~----~Pe-~~~~l~~~I 187 (552)
+|.++ .+..-+|...|.+|.+..+.+++++++||||+.+++..+.+ ..+ .+.++.-+|
T Consensus 162 -------------~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nVi 228 (377)
T COG4782 162 -------------GYNYDRESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVI 228 (377)
T ss_pred -------------ecccchhhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheE
Confidence 22222 33344677889999988888999999999999998876543 334 567888888
Q ss_pred ecccccccc
Q psy3848 188 SLAPVAYLS 196 (552)
Q Consensus 188 ~laP~~~~~ 196 (552)
+-+|-....
T Consensus 229 LAaPDiD~D 237 (377)
T COG4782 229 LAAPDIDVD 237 (377)
T ss_pred eeCCCCChh
Confidence 888876654
No 154
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.47 E-value=0.0003 Score=75.81 Aligned_cols=84 Identities=24% Similarity=0.209 Sum_probs=61.9
Q ss_pred HHHHHHHHhCCceE-----EE-EcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEech
Q psy3848 91 TALAYLLADKGYDV-----WL-GNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSM 164 (552)
Q Consensus 91 ~~la~~La~~Gy~V-----ia-~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSm 164 (552)
..+++.|.+.||+. -+ +|+| +++. ..+++.. .|.+.|+.+.+.. ..++++|||||
T Consensus 68 ~~li~~L~~~GY~~~~~l~~~pYDWR----------~~~~-------~~~~~~~-~lk~~ie~~~~~~-~~kv~li~HSm 128 (389)
T PF02450_consen 68 AKLIENLEKLGYDRGKDLFAAPYDWR----------LSPA-------ERDEYFT-KLKQLIEEAYKKN-GKKVVLIAHSM 128 (389)
T ss_pred HHHHHHHHhcCcccCCEEEEEeechh----------hchh-------hHHHHHH-HHHHHHHHHHHhc-CCcEEEEEeCC
Confidence 34888999988862 23 7998 1222 1234443 6778888887766 58999999999
Q ss_pred hHHHHHHHHHcCCc---chhchheeeeccccc
Q psy3848 165 GTTMFYVLTSQRPE---YNEKLLGAISLAPVA 193 (552)
Q Consensus 165 GG~ial~~a~~~Pe---~~~~l~~~I~laP~~ 193 (552)
||.+++.+....+. ..+.|..+|.+|++.
T Consensus 129 Ggl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 129 GGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred CchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 99999999988753 346789999998754
No 155
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.42 E-value=0.0099 Score=63.41 Aligned_cols=156 Identities=13% Similarity=0.030 Sum_probs=86.6
Q ss_pred EEECC--CCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHH
Q psy3848 15 IVQTE--DGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTA 92 (552)
Q Consensus 15 ~V~t~--DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 92 (552)
.+... .+..+.++.++... ...+.|.||++.|.+|.+..|.. -...|--+.. .+ .....+.|..
T Consensus 15 yl~~~~~~~~~lfyw~~~s~~---~~~~~Pl~~wlnGGPG~SS~~g~---f~e~GP~~~~-~~----~~~~l~~n~~--- 80 (415)
T PF00450_consen 15 YLPVNDNENAHLFYWFFESRN---DPEDDPLILWLNGGPGCSSMWGL---FGENGPFRIN-PD----GPYTLEDNPY--- 80 (415)
T ss_dssp EEEECTTTTEEEEEEEEE-SS---GGCSS-EEEEEE-TTTB-THHHH---HCTTSSEEEE-TT----STSEEEE-TT---
T ss_pred EEecCCCCCcEEEEEEEEeCC---CCCCccEEEEecCCceecccccc---ccccCceEEe-ec----cccccccccc---
Confidence 44444 67788888887543 23578999999999999987743 1122222211 00 0011111111
Q ss_pred HHHHHHhCCceEEEEc-CCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC---CCcEEEEEechhHHH
Q psy3848 93 LAYLLADKGYDVWLGN-ARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD---HTQMIYIGHSMGTTM 168 (552)
Q Consensus 93 la~~La~~Gy~Via~D-~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g---~~ki~lVGHSmGG~i 168 (552)
...+ -..|+-+| ..|.|.|..... ... ..+.++.+. |+.+++..+..+.. ..+++|.|.|.||..
T Consensus 81 ---sW~~-~an~l~iD~PvGtGfS~~~~~---~~~---~~~~~~~a~-~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~y 149 (415)
T PF00450_consen 81 ---SWNK-FANLLFIDQPVGTGFSYGNDP---SDY---VWNDDQAAE-DLYEFLQQFFQKFPEYRSNPLYIAGESYGGHY 149 (415)
T ss_dssp ----GGG-TSEEEEE--STTSTT-EESSG---GGG---S-SHHHHHH-HHHHHHHHHHHHSGGGTTSEEEEEEETTHHHH
T ss_pred ---cccc-ccceEEEeecCceEEeecccc---ccc---cchhhHHHH-HHHHHHHHhhhhhhhccCCCEEEEcccccccc
Confidence 1233 36899999 559999974221 111 235566665 77777777766543 458999999999998
Q ss_pred HHHHHHcCCcc-------hhchheeeeccccccc
Q psy3848 169 FYVLTSQRPEY-------NEKLLGAISLAPVAYL 195 (552)
Q Consensus 169 al~~a~~~Pe~-------~~~l~~~I~laP~~~~ 195 (552)
+-.+|..--+. .-.|+|+++..|...+
T Consensus 150 vP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 150 VPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred chhhHHhhhhccccccccccccccceecCccccc
Confidence 76666542111 2457787777776554
No 156
>KOG3724|consensus
Probab=97.42 E-value=0.00071 Score=77.02 Aligned_cols=150 Identities=19% Similarity=0.150 Sum_probs=82.0
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCC---CCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCcccc-C
Q psy3848 12 ESYIVQTEDGYLLEIHRIPYGRKG---RRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVV-A 87 (552)
Q Consensus 12 e~~~V~t~DG~~L~~~~i~~~~~~---~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 87 (552)
.+..-++.|-|.|-+++-.. ++. .-+-+|-||+++.|=.||-.+-+. |++-++=.. +
T Consensus 58 ~~r~t~~a~kY~LYLY~Egs-~~~e~~~lelsGIPVLFIPGNAGSyKQvRS------------------iAS~a~n~y~~ 118 (973)
T KOG3724|consen 58 PERLTPQADKYSLYLYREGS-RWWERSTLELSGIPVLFIPGNAGSYKQVRS------------------IASVAQNAYQG 118 (973)
T ss_pred cccccCCCCceEEEEecccc-cccccccccCCCceEEEecCCCCchHHHHH------------------HHHHHhhhhcC
Confidence 33445667778776655322 111 122468999999998888766555 000000000 0
Q ss_pred CCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCC---------CcEE
Q psy3848 88 GPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDH---------TQMI 158 (552)
Q Consensus 88 ~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~---------~ki~ 158 (552)
.|-+.-........|+-++.|+-+ ..+-. -.-++.+.++ -+.++|.+|+..+.. ..++
T Consensus 119 ~~~e~t~~~d~~~~~DFFaVDFnE--------e~tAm----~G~~l~dQtE-YV~dAIk~ILslYr~~~e~~~p~P~sVI 185 (973)
T KOG3724|consen 119 GPFEKTEDRDNPFSFDFFAVDFNE--------EFTAM----HGHILLDQTE-YVNDAIKYILSLYRGEREYASPLPHSVI 185 (973)
T ss_pred CchhhhhcccCccccceEEEcccc--------hhhhh----ccHhHHHHHH-HHHHHHHHHHHHhhcccccCCCCCceEE
Confidence 000000001111236777777642 11111 1234556665 567888888876543 2399
Q ss_pred EEEechhHHHHHHHHHcCCcchhchheeeeccccc
Q psy3848 159 YIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 159 lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
+|||||||.+|.+++..--++...|..+|.++.+.
T Consensus 186 LVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 186 LVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred EEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 99999999999988765324445566666665443
No 157
>COG0627 Predicted esterase [General function prediction only]
Probab=97.34 E-value=0.00031 Score=73.82 Aligned_cols=64 Identities=20% Similarity=0.237 Sum_probs=46.6
Q ss_pred cChhhhhhccHHHHHHHHHHHcC-CCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccccccC
Q psy3848 131 FSFHEMGYFDLPAEIDFILNKTD-HTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSR 197 (552)
Q Consensus 131 ~s~~~~~~~Dl~a~I~~I~~~~g-~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~~~ 197 (552)
+.++++....|++.++......+ .++-.++||||||.=|+.+|+.+|+ +...+.+.+|...+..
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd---~f~~~sS~Sg~~~~s~ 191 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD---RFKSASSFSGILSPSS 191 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc---hhceeccccccccccc
Confidence 66777777677776664433222 1368999999999999999999995 4666677777776653
No 158
>KOG2112|consensus
Probab=97.32 E-value=0.0022 Score=63.12 Aligned_cols=59 Identities=17% Similarity=0.058 Sum_probs=41.3
Q ss_pred cccEEEEEeCCCCCCCHHHHHHHHHhCCC-CccceEEEeCCCCcccccccccchHHHHHHHHHHHHh
Q psy3848 384 STKVAFFYADNDLLTNEQDVKELYTLLPN-PVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 449 (552)
Q Consensus 384 ~~PvLii~G~~D~i~p~~~~~~l~~~lp~-~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~ 449 (552)
.+|++..||+.|+++|....+...+.+.. ...+....+++.+|.-. ++ =..++..||++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~------~~-e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS------PQ-ELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc------HH-HHHHHHHHHHH
Confidence 57999999999999998766655554432 11146777999999732 22 25678888876
No 159
>KOG3253|consensus
Probab=97.31 E-value=0.002 Score=71.69 Aligned_cols=70 Identities=17% Similarity=0.141 Sum_probs=56.1
Q ss_pred CCCCccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccc-------cchHHHHHHHHHHHHhhc
Q psy3848 379 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAK-------DVKALVYNDLLLVLKTFS 451 (552)
Q Consensus 379 ~l~~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~-------~~~~~V~~~il~fL~~~~ 451 (552)
+|-.++.||||+.|.+|..|+++.-+.+.+++.... .++++.+++|. +-..+ ..+..|-..+.+||+++-
T Consensus 299 ~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~--elhVI~~adhs-maipk~k~esegltqseVd~~i~~aI~efv 375 (784)
T KOG3253|consen 299 ALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEV--ELHVIGGADHS-MAIPKRKVESEGLTQSEVDSAIAQAIKEFV 375 (784)
T ss_pred hhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccc--eEEEecCCCcc-ccCCccccccccccHHHHHHHHHHHHHHHH
Confidence 455678999999999999999999999999988766 58889999995 33332 456677777888887765
No 160
>KOG3975|consensus
Probab=97.31 E-value=0.016 Score=58.71 Aligned_cols=114 Identities=18% Similarity=0.187 Sum_probs=77.2
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhC-C--ceEEEEcCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADK-G--YDVWLGNARGNTYS 115 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~-G--y~Via~D~RG~G~S 115 (552)
..++.++++.|=+|....|.. ++..|... + ..||..-..||-.-
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~---------------------------------F~~~L~~~l~~r~~~wtIsh~~H~~~ 73 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTE---------------------------------FARHLHLNLIDRLPVWTISHAGHALM 73 (301)
T ss_pred CCceEEEEecCCCCchhHHHH---------------------------------HHHHHHHhcccccceeEEeccccccC
Confidence 468899999999999998887 77766653 2 56999999887654
Q ss_pred CCCCCCCC---CcccccccChhhhhhccHHHHHHHHHHHcC-CCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 116 RSHISYSP---MDLAFWDFSFHEMGYFDLPAEIDFILNKTD-HTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 116 ~~~~~~sp---~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g-~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
..+..-.+ ..+ -|++++.++ --+++|.+... ..|++++|||.|+.|.+...-..-+ .-.+.-++++-|
T Consensus 74 P~sl~~~~s~~~~e---ifsL~~QV~----HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~-~~~vqKa~~LFP 145 (301)
T KOG3975|consen 74 PASLREDHSHTNEE---IFSLQDQVD----HKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKL-VFSVQKAVLLFP 145 (301)
T ss_pred Cccccccccccccc---ccchhhHHH----HHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhccc-ccceEEEEEecc
Confidence 31111011 112 467777775 56667777654 3589999999999999998853111 234555677777
Q ss_pred cc
Q psy3848 192 VA 193 (552)
Q Consensus 192 ~~ 193 (552)
..
T Consensus 146 TI 147 (301)
T KOG3975|consen 146 TI 147 (301)
T ss_pred hH
Confidence 54
No 161
>KOG3101|consensus
Probab=97.29 E-value=0.00013 Score=71.86 Aligned_cols=126 Identities=18% Similarity=0.215 Sum_probs=78.8
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHH-hCCceEEEEcC--CCC---C
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLA-DKGYDVWLGNA--RGN---T 113 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La-~~Gy~Via~D~--RG~---G 113 (552)
.-|+|+++-|+.+..+.+.. ++-.+..| +.|+.|+++|- ||. |
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~-------------------------------Ksg~qq~As~hgl~vV~PDTSPRG~~v~g 91 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIE-------------------------------KSGFQQQASKHGLAVVAPDTSPRGVEVAG 91 (283)
T ss_pred cCceEEEecCCcccchhhHh-------------------------------hhhHHHhHhhcCeEEECCCCCCCccccCC
Confidence 35899999999999987766 44444444 56999999995 331 1
Q ss_pred CCCCCC------CCCCCccccc--ccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchhe
Q psy3848 114 YSRSHI------SYSPMDLAFW--DFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLG 185 (552)
Q Consensus 114 ~S~~~~------~~sp~~~~~~--~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~ 185 (552)
.+++.. -+-....+-| .|.+-+++...|++.++.---.++..++-+.||||||.=|+..+.+.|. +..+
T Consensus 92 ~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~---kykS 168 (283)
T KOG3101|consen 92 DDESWDFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPS---KYKS 168 (283)
T ss_pred CcccccccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcc---cccc
Confidence 121110 0000111122 2445555544444444422223445579999999999999999999994 5666
Q ss_pred eeeccccccccCCC
Q psy3848 186 AISLAPVAYLSRTR 199 (552)
Q Consensus 186 ~I~laP~~~~~~~~ 199 (552)
+-+.||.+++....
T Consensus 169 vSAFAPI~NP~~cp 182 (283)
T KOG3101|consen 169 VSAFAPICNPINCP 182 (283)
T ss_pred eeccccccCcccCc
Confidence 67778888775543
No 162
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.14 E-value=0.0056 Score=66.61 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=29.8
Q ss_pred CCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccc
Q psy3848 153 DHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPV 192 (552)
Q Consensus 153 g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~ 192 (552)
+.++.+|+|+||||..++.++.++|+. +..+++++|.
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~---Fg~v~s~Sgs 322 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPER---FGCVLSQSGS 322 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCccc---ccEEEEeccc
Confidence 345789999999999999999999965 5555666664
No 163
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.10 E-value=0.0032 Score=68.49 Aligned_cols=95 Identities=20% Similarity=0.183 Sum_probs=63.9
Q ss_pred HHHHHHhC-CceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC---CCcEEEEEechhHHH
Q psy3848 93 LAYLLADK-GYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD---HTQMIYIGHSMGTTM 168 (552)
Q Consensus 93 la~~La~~-Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g---~~ki~lVGHSmGG~i 168 (552)
+...||++ |=-|++.-+|-+|.|.....++..+.+| .|.+.... |+..+|+++.++.. ..+++++|-|.||++
T Consensus 50 ~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~y--Lt~~QALa-D~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~L 126 (434)
T PF05577_consen 50 FMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRY--LTSEQALA-DLAYFIRYVKKKYNTAPNSPWIVFGGSYGGAL 126 (434)
T ss_dssp HHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC---SHHHHHH-HHHHHHHHHHHHTTTGCC--EEEEEETHHHHH
T ss_pred hHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHh--cCHHHHHH-HHHHHHHHHHHhhcCCCCCCEEEECCcchhHH
Confidence 44455543 6689999999999998666555555544 55555554 99999999987653 348999999999999
Q ss_pred HHHHHHcCCcchhchheeeeccccc
Q psy3848 169 FYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 169 al~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
+..+-..+|+. +.|+++.+++.
T Consensus 127 aaw~r~kyP~~---~~ga~ASSapv 148 (434)
T PF05577_consen 127 AAWFRLKYPHL---FDGAWASSAPV 148 (434)
T ss_dssp HHHHHHH-TTT----SEEEEET--C
T ss_pred HHHHHhhCCCe---eEEEEecccee
Confidence 99999999964 55666554433
No 164
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.97 E-value=0.0061 Score=67.03 Aligned_cols=79 Identities=19% Similarity=0.164 Sum_probs=49.2
Q ss_pred ceEEEEcCC-C---CCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHH---cC--CCcEEEEEechhHHHHHHH
Q psy3848 102 YDVWLGNAR-G---NTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK---TD--HTQMIYIGHSMGTTMFYVL 172 (552)
Q Consensus 102 y~Via~D~R-G---~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~---~g--~~ki~lVGHSmGG~ial~~ 172 (552)
+.|+.+++| | +..+.... .+. ++.+ .|..++++++.+. .| .+++.++|||.||.++..+
T Consensus 126 ~~vv~~~yRlg~~g~~~~~~~~--~~~-----n~g~-----~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~ 193 (493)
T cd00312 126 VIVVSINYRLGVLGFLSTGDIE--LPG-----NYGL-----KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLL 193 (493)
T ss_pred EEEEEecccccccccccCCCCC--CCc-----chhH-----HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhH
Confidence 999999999 3 33222110 011 2222 2666888888765 34 4589999999999999887
Q ss_pred HHcCCcchhchheeeeccccc
Q psy3848 173 TSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 173 a~~~Pe~~~~l~~~I~laP~~ 193 (552)
+.. |.....+..+|+.+...
T Consensus 194 ~~~-~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 194 LLS-PDSKGLFHRAISQSGSA 213 (493)
T ss_pred hhC-cchhHHHHHHhhhcCCc
Confidence 765 32223355556666543
No 165
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.96 E-value=0.0024 Score=63.14 Aligned_cols=91 Identities=20% Similarity=0.255 Sum_probs=60.2
Q ss_pred HHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCC-CcEEEEEechhHHHHHHH
Q psy3848 94 AYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDH-TQMIYIGHSMGTTMFYVL 172 (552)
Q Consensus 94 a~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~-~ki~lVGHSmGG~ial~~ 172 (552)
+..|.+. .+||+|=+|=............. .-...++++.|+.++.++.+++.+. .+++|+|||+|+.+...+
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~-----~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~L 112 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDRED-----AEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRL 112 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcch-----hHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHH
Confidence 4445554 58999999832222111000111 1224567777999999999888764 489999999999999999
Q ss_pred HHcC----Ccchhchheeeeccc
Q psy3848 173 TSQR----PEYNEKLLGAISLAP 191 (552)
Q Consensus 173 a~~~----Pe~~~~l~~~I~laP 191 (552)
..++ | ..++++++-+++-
T Consensus 113 L~e~~~~~p-l~~rLVAAYliG~ 134 (207)
T PF11288_consen 113 LKEEIAGDP-LRKRLVAAYLIGY 134 (207)
T ss_pred HHHHhcCch-HHhhhheeeecCc
Confidence 8764 3 4567777655553
No 166
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.69 E-value=0.005 Score=62.44 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=65.5
Q ss_pred CcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCC-----ceEEEEcCCCC---
Q psy3848 41 KEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKG-----YDVWLGNARGN--- 112 (552)
Q Consensus 41 ~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~G-----y~Via~D~RG~--- 112 (552)
.-|.|++||.+|+...... ++..|...+ -=+...|--|-
T Consensus 45 ~iPTIfIhGsgG~asS~~~---------------------------------Mv~ql~~~~~~~~e~Lt~~V~~dgslk~ 91 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNG---------------------------------MVNQLLPDYKAGTESLTMTVDVDGSLKV 91 (288)
T ss_pred ccceEEEecCCCChhHHHH---------------------------------HHHHhhhcccccccceEEEEcCCCcEEE
Confidence 4689999999999988776 666666643 12555665551
Q ss_pred -CCCCCCCCCCCCcc-ccc--ccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCC
Q psy3848 113 -TYSRSHISYSPMDL-AFW--DFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRP 177 (552)
Q Consensus 113 -G~S~~~~~~sp~~~-~~~--~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~P 177 (552)
|.=+++.. .|.-+ .|- .-+..++.. =+...+.++.++++++++.+|||||||.-+..|+..+.
T Consensus 92 tGk~~Kd~~-nP~I~~gfe~n~~s~~~~s~-wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg 158 (288)
T COG4814 92 TGKISKDAK-NPIIEFGFEDNTASGLDQSK-WLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYG 158 (288)
T ss_pred eeeecccCC-CCeEEEEEecCcCchhhHHH-HHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhc
Confidence 11122221 12100 000 112223322 34588899999999999999999999999999988764
No 167
>PLN02606 palmitoyl-protein thioesterase
Probab=96.69 E-value=0.0081 Score=62.62 Aligned_cols=35 Identities=14% Similarity=0.071 Sum_probs=29.0
Q ss_pred cEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 156 QMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 156 ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
-+++||+|+||.++.+++.+.|+. ..+..+|+++.
T Consensus 96 G~naIGfSQGglflRa~ierc~~~-p~V~nlISlgg 130 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCDNA-PPVINYVSLGG 130 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCCCC-CCcceEEEecC
Confidence 599999999999999999998851 35777787765
No 168
>KOG2541|consensus
Probab=96.69 E-value=0.0081 Score=61.34 Aligned_cols=101 Identities=18% Similarity=0.128 Sum_probs=66.4
Q ss_pred cEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhC-CceEEEEcCCCCCCCCCCCC
Q psy3848 42 EVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADK-GYDVWLGNARGNTYSRSHIS 120 (552)
Q Consensus 42 ~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~-Gy~Via~D~RG~G~S~~~~~ 120 (552)
-|+|++||++.+...... .++.+.+.+. |..|++.+. |.| ..+.
T Consensus 24 ~P~ii~HGigd~c~~~~~-------------------------------~~~~q~l~~~~g~~v~~lei-g~g--~~~s- 68 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSM-------------------------------ANLTQLLEELPGSPVYCLEI-GDG--IKDS- 68 (296)
T ss_pred CCEEEEeccCcccccchH-------------------------------HHHHHHHHhCCCCeeEEEEe-cCC--cchh-
Confidence 589999999998887333 3477777764 899999996 555 1111
Q ss_pred CCCCcccccccChhhhhhccHHHHHHHHHHHcCC-CcEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 121 YSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDH-TQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 121 ~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~-~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
|-....+.+. .+.+.+..--.+ .-.++||.|+||.++.+++...++ ..+..+|+++.
T Consensus 69 --------~l~pl~~Qv~----~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~--ppV~n~ISL~g 126 (296)
T KOG2541|consen 69 --------SLMPLWEQVD----VACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDN--PPVKNFISLGG 126 (296)
T ss_pred --------hhccHHHHHH----HHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCC--CCcceeEeccC
Confidence 1111223332 333333321111 249999999999999999998775 67888888875
No 169
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.55 E-value=0.0047 Score=69.35 Aligned_cols=92 Identities=17% Similarity=0.218 Sum_probs=60.5
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHH
Q psy3848 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFY 170 (552)
Q Consensus 91 ~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial 170 (552)
..+++.|++.||+ --|++|..|--+. ++... ..-+++-. .|...|+.+.+..+.+|++||||||||.+++
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAPYDWRl---s~~~l----e~rd~YF~-rLK~lIE~ay~~nggkKVVLV~HSMGglv~l 228 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAAYDWRL---SFQNT----EVRDQTLS-RLKSNIELMVATNGGKKVVVVPHSMGVLYFL 228 (642)
T ss_pred HHHHHHHHHcCCC--CCceeeccccccc---Cccch----hhhhHHHH-HHHHHHHHHHHHcCCCeEEEEEeCCchHHHH
Confidence 5688999999997 4555554433221 21110 01123332 6778888888777778999999999999999
Q ss_pred HHHHcC-----------Cc-chhchheeeecccc
Q psy3848 171 VLTSQR-----------PE-YNEKLLGAISLAPV 192 (552)
Q Consensus 171 ~~a~~~-----------Pe-~~~~l~~~I~laP~ 192 (552)
.+...- ++ ..+.|..+|.++++
T Consensus 229 yFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 229 HFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 987632 22 23457788888874
No 170
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.55 E-value=0.047 Score=57.26 Aligned_cols=144 Identities=15% Similarity=0.107 Sum_probs=85.1
Q ss_pred ceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCc
Q psy3848 11 AESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPD 90 (552)
Q Consensus 11 ~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 90 (552)
-|...++..+...+.+++-..+. .....||++||.+.+...-.. .
T Consensus 62 ~e~~~L~~~~~~flaL~~~~~~~-----~~~G~vIilp~~g~~~d~p~~----------------------------i-- 106 (310)
T PF12048_consen 62 DEVQWLQAGEERFLALWRPANSA-----KPQGAVIILPDWGEHPDWPGL----------------------------I-- 106 (310)
T ss_pred hhcEEeecCCEEEEEEEecccCC-----CCceEEEEecCCCCCCCcHhH----------------------------H--
Confidence 56678888777788777643332 345699999998776643222 1
Q ss_pred HHHHHHHHhCCceEEEEcCCC--CCCCCCCC------------CC-CCCcc---------cccccChhhhhhccHHHHHH
Q psy3848 91 TALAYLLADKGYDVWLGNARG--NTYSRSHI------------SY-SPMDL---------AFWDFSFHEMGYFDLPAEID 146 (552)
Q Consensus 91 ~~la~~La~~Gy~Via~D~RG--~G~S~~~~------------~~-sp~~~---------~~~~~s~~~~~~~Dl~a~I~ 146 (552)
..|-..|.++|+.++.+-++. ...+.... .. ++.+. +- .-...+-+..-+.+.+.
T Consensus 107 ~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ari~Aa~~ 185 (310)
T PF12048_consen 107 APLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA-REAYEERLFARIEAAIA 185 (310)
T ss_pred HHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH-hHHHHHHHHHHHHHHHH
Confidence 347888999999999998885 11110000 00 00000 00 00011111112334444
Q ss_pred HHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccc
Q psy3848 147 FILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 147 ~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
++. ..+...++||||.+|+.++..+.+..+. ..+.++|+++|-.
T Consensus 186 ~~~-~~~~~~ivlIg~G~gA~~~~~~la~~~~--~~~daLV~I~a~~ 229 (310)
T PF12048_consen 186 FAQ-QQGGKNIVLIGHGTGAGWAARYLAEKPP--PMPDALVLINAYW 229 (310)
T ss_pred HHH-hcCCceEEEEEeChhHHHHHHHHhcCCC--cccCeEEEEeCCC
Confidence 333 3455669999999999999999998873 3466777777644
No 171
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.53 E-value=0.069 Score=53.17 Aligned_cols=64 Identities=14% Similarity=0.068 Sum_probs=49.0
Q ss_pred CccccEEEEEeCCCCCCCHHHHHHHHHhCCC-CccceEEEeCCCCcccccccccchHHHHHHHHHHH
Q psy3848 382 FISTKVAFFYADNDLLTNEQDVKELYTLLPN-PVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVL 447 (552)
Q Consensus 382 ~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~-~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL 447 (552)
...+|-|+++++.|.+++.+++++..+.... ...+....+++..|..|+ ...+++-++.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~--r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHL--RKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhc--ccCHHHHHHHHHhhC
Confidence 3458999999999999999999887766432 222456678999999886 567777888887764
No 172
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.40 E-value=0.014 Score=51.19 Aligned_cols=60 Identities=13% Similarity=0.053 Sum_probs=49.3
Q ss_pred cccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHh
Q psy3848 384 STKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 449 (552)
Q Consensus 384 ~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~ 449 (552)
..|+|++.++.|+++|.+.++.+.+.++++. ++..++.||..+... ..-+.+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~---lvt~~g~gHg~~~~~---s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSR---LVTVDGAGHGVYAGG---SPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCce---EEEEeccCcceecCC---ChHHHHHHHHHHHc
Confidence 5899999999999999999999999999976 888999999866422 23356666778764
No 173
>KOG3847|consensus
Probab=96.38 E-value=0.0035 Score=65.22 Aligned_cols=44 Identities=27% Similarity=0.305 Sum_probs=37.2
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYS 115 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S 115 (552)
++-|+|||-||++++...|.. +.-.||.+||-|.++.+|-+-.+
T Consensus 116 ~k~PvvvFSHGLggsRt~YSa---------------------------------~c~~LAShG~VVaavEHRD~SA~ 159 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLYSA---------------------------------YCTSLASHGFVVAAVEHRDRSAC 159 (399)
T ss_pred CCccEEEEecccccchhhHHH---------------------------------HhhhHhhCceEEEEeecccCcce
Confidence 456899999999999988876 67779999999999999965444
No 174
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.35 E-value=0.017 Score=63.38 Aligned_cols=133 Identities=21% Similarity=0.141 Sum_probs=71.5
Q ss_pred ECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHH
Q psy3848 17 QTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYL 96 (552)
Q Consensus 17 ~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~ 96 (552)
+++|=-.|.++.-..... ..+.|++|++||.+-.... + ..+...-...
T Consensus 104 ~sEDCL~LnI~~P~~~~~---~~~lPV~v~ihGG~f~~G~------------------------~-----~~~~~~~~~~ 151 (535)
T PF00135_consen 104 QSEDCLYLNIYTPSNASS---NSKLPVMVWIHGGGFMFGS------------------------G-----SFPPYDGASL 151 (535)
T ss_dssp BES---EEEEEEETSSSS---TTSEEEEEEE--STTTSSC------------------------T-----TSGGGHTHHH
T ss_pred CCchHHHHhhhhcccccc---ccccceEEEeecccccCCC------------------------c-----cccccccccc
Confidence 467776777766433211 1257999999995432211 0 0001123455
Q ss_pred HHhCCceEEEEcCC----CCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHH---cCC--CcEEEEEechhHH
Q psy3848 97 LADKGYDVWLGNAR----GNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK---TDH--TQMIYIGHSMGTT 167 (552)
Q Consensus 97 La~~Gy~Via~D~R----G~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~---~g~--~ki~lVGHSmGG~ 167 (552)
+++++.-|+.+++| |+-.+.... .+ .. ++.+. |...++++|++. +|. ++|.|+|||-||.
T Consensus 152 ~~~~~vivVt~nYRlg~~Gfl~~~~~~--~~-~g---N~Gl~-----Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~ 220 (535)
T PF00135_consen 152 AASKDVIVVTINYRLGAFGFLSLGDLD--AP-SG---NYGLL-----DQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAA 220 (535)
T ss_dssp HHHHTSEEEEE----HHHHH-BSSSTT--SH-BS---THHHH-----HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHH
T ss_pred ccCCCEEEEEecccccccccccccccc--cC-ch---hhhhh-----hhHHHHHHHHhhhhhcccCCcceeeeeeccccc
Confidence 67779999999999 433222111 11 01 33333 666899999875 443 4799999999999
Q ss_pred HHHHHHHcCCcchhchheeeeccccc
Q psy3848 168 MFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 168 ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
.+..++.. |....-+..+|+.+...
T Consensus 221 sv~~~l~s-p~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 221 SVSLLLLS-PSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHG-GGGTTSBSEEEEES--T
T ss_pred ccceeeec-ccccccccccccccccc
Confidence 98887766 54333456677777643
No 175
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.35 E-value=0.029 Score=62.81 Aligned_cols=131 Identities=21% Similarity=0.245 Sum_probs=85.7
Q ss_pred cCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCcccc
Q psy3848 7 HGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVV 86 (552)
Q Consensus 7 ~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (552)
.+|.+|.+..++.||..+.+..+..+.+ . .++|++|.-.|.+.-+..-..
T Consensus 390 ~~~~veQ~~atSkDGT~IPYFiv~K~~~--~-d~~pTll~aYGGF~vsltP~f--------------------------- 439 (648)
T COG1505 390 DNYEVEQFFATSKDGTRIPYFIVRKGAK--K-DENPTLLYAYGGFNISLTPRF--------------------------- 439 (648)
T ss_pred cCceEEEEEEEcCCCccccEEEEecCCc--C-CCCceEEEeccccccccCCcc---------------------------
Confidence 4678899999999999999877752211 1 257788777776665554333
Q ss_pred CCCcHHHHHHHHhCCceEEEEcCCCCCCCCC--CCCCCCCcccccccChhhhhhccHHHHHHHHHHH--cCCCcEEEEEe
Q psy3848 87 AGPDTALAYLLADKGYDVWLGNARGNTYSRS--HISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK--TDHTQMIYIGH 162 (552)
Q Consensus 87 ~~p~~~la~~La~~Gy~Via~D~RG~G~S~~--~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~--~g~~ki~lVGH 162 (552)
. -+. ....++|..-+..|.||-|.=.. |....-.++ ...++ |..+..+.+.++ +..+++-+-|-
T Consensus 440 -s--~~~-~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nr---q~vfd-----Df~AVaedLi~rgitspe~lgi~Gg 507 (648)
T COG1505 440 -S--GSR-KLWLERGGVFVLANIRGGGEFGPEWHQAGMKENK---QNVFD-----DFIAVAEDLIKRGITSPEKLGIQGG 507 (648)
T ss_pred -c--hhh-HHHHhcCCeEEEEecccCCccCHHHHHHHhhhcc---hhhhH-----HHHHHHHHHHHhCCCCHHHhhhccC
Confidence 1 124 55566798888999998664321 100000011 22344 555777777654 23358999999
Q ss_pred chhHHHHHHHHHcCCcc
Q psy3848 163 SMGTTMFYVLTSQRPEY 179 (552)
Q Consensus 163 SmGG~ial~~a~~~Pe~ 179 (552)
|=||.+.-+...|+||.
T Consensus 508 SNGGLLvg~alTQrPel 524 (648)
T COG1505 508 SNGGLLVGAALTQRPEL 524 (648)
T ss_pred CCCceEEEeeeccChhh
Confidence 99999999999999964
No 176
>KOG4840|consensus
Probab=96.34 E-value=0.0089 Score=59.61 Aligned_cols=108 Identities=21% Similarity=0.208 Sum_probs=76.1
Q ss_pred CcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCC----CCCCCC
Q psy3848 41 KEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNAR----GNTYSR 116 (552)
Q Consensus 41 ~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~R----G~G~S~ 116 (552)
+.-||++-|++...-.... -+-++.+|-+.+|..+-+-++ |+|.
T Consensus 36 ~~~vvfiGGLgdgLl~~~y------------------------------~~~L~~~lde~~wslVq~q~~Ssy~G~Gt-- 83 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLY------------------------------TTMLNRYLDENSWSLVQPQLRSSYNGYGT-- 83 (299)
T ss_pred EEEEEEEcccCCCcccccc------------------------------HHHHHHHHhhccceeeeeecccccccccc--
Confidence 4678899998766544332 234888999999999999887 2322
Q ss_pred CCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccccccc
Q psy3848 117 SHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLS 196 (552)
Q Consensus 117 ~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~~ 196 (552)
+++.+=++ |+...++.|...-.-++++++|||.|+.=.+.|..+. ..-.+|+++|+.||+....
T Consensus 84 --------------~slk~D~e-dl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt-~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 84 --------------FSLKDDVE-DLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNT-TKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred --------------ccccccHH-HHHHHHHHhhccCcccceEEEecCccchHHHHHHHhc-cchHHHHHHHHhCccchhh
Confidence 23333343 7777777666543345899999999999988888543 2236788889999988654
No 177
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.25 E-value=0.0074 Score=55.93 Aligned_cols=54 Identities=13% Similarity=0.119 Sum_probs=37.6
Q ss_pred cHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcc-hhchheeeeccccc
Q psy3848 140 DLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEY-NEKLLGAISLAPVA 193 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~-~~~l~~~I~laP~~ 193 (552)
.+...++..+.+....+++++||||||.+|..++.+.... ..++..++..+|+.
T Consensus 13 ~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 13 LVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 4445555555555778999999999999999998876532 12455556666544
No 178
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=96.20 E-value=0.0054 Score=60.02 Aligned_cols=87 Identities=11% Similarity=0.054 Sum_probs=67.7
Q ss_pred ccccccccccccCCCCCCCCCCCcc-ccEEEEEeCCCCCCCHHHH---HHHHHhCCCCccceEEEeCCCCcccccccccc
Q psy3848 360 DYGKDENLHIYNSTFPPKYDLKFIS-TKVAFFYADNDLLTNEQDV---KELYTLLPNPVGLFKVNFTYFNHLDFLWAKDV 435 (552)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~l~~I~-~PvLii~G~~D~i~p~~~~---~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~ 435 (552)
++.+-.|+..+..+.. +++.|+ +++|-|-|+.|.|+.+..+ ..|...+|... +..+..+++||.++.-|..-
T Consensus 112 ~~~L~~G~~~~~Gr~V---dp~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~-k~~~~~~g~GHYGlF~G~rw 187 (202)
T PF06850_consen 112 EHLLPRGTWTVRGRPV---DPAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADM-KRHHLQPGVGHYGLFNGSRW 187 (202)
T ss_pred hCcccCCceEECCEEc---chHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHH-hhhcccCCCCeeecccchhh
Confidence 4466667777777666 777777 7777899999999987554 45555566544 24566899999999999999
Q ss_pred hHHHHHHHHHHHHhh
Q psy3848 436 KALVYNDLLLVLKTF 450 (552)
Q Consensus 436 ~~~V~~~il~fL~~~ 450 (552)
.++|++.|.+||.++
T Consensus 188 r~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 188 REEIYPRIREFIRQH 202 (202)
T ss_pred hhhhhHHHHHHHHhC
Confidence 999999999999763
No 179
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.14 E-value=0.0071 Score=62.42 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=26.9
Q ss_pred CcEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 155 TQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 155 ~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
+-+++||+|.||.++.+++.+.|. ..+..+|+++.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~--~~V~nlISlgg 114 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND--PPVHNLISLGG 114 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS--S-EEEEEEES-
T ss_pred cceeeeeeccccHHHHHHHHHCCC--CCceeEEEecC
Confidence 359999999999999999999874 36777788775
No 180
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.05 E-value=0.037 Score=57.90 Aligned_cols=105 Identities=15% Similarity=0.098 Sum_probs=62.3
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHh-CCceEEEEcCCCCCCCCCC
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLAD-KGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~-~Gy~Via~D~RG~G~S~~~ 118 (552)
...|||+.||++.+...-.. .++.+.+.+ .|..|.++-. |.+ ...
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~-------------------------------~~~~~l~~~~~g~~~~~i~i-g~~--~~~ 69 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATN-------------------------------ANFTQLLTNLSGSPGFCLEI-GNG--VGD 69 (314)
T ss_pred CCCCeEEecCCCcccCCchH-------------------------------HHHHHHHHhCCCCceEEEEE-CCC--ccc
Confidence 45699999999876554222 346666655 3677776643 332 111
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
. | -..+.+.++ .+.+.|.... .+. +-+++||+|+||.++..++.+.|+. ..+..+|+++.
T Consensus 70 s--------~-~~~~~~Qve-~vce~l~~~~-~l~-~G~naIGfSQGGlflRa~ierc~~~-p~V~nlISlgg 129 (314)
T PLN02633 70 S--------W-LMPLTQQAE-IACEKVKQMK-ELS-QGYNIVGRSQGNLVARGLIEFCDGG-PPVYNYISLAG 129 (314)
T ss_pred c--------c-eeCHHHHHH-HHHHHHhhch-hhh-CcEEEEEEccchHHHHHHHHHCCCC-CCcceEEEecC
Confidence 1 1 122333332 2223333211 122 2599999999999999999998851 25777787765
No 181
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.02 E-value=0.033 Score=61.33 Aligned_cols=133 Identities=22% Similarity=0.223 Sum_probs=79.6
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCC---CCCcc-ccccCCcccccccccccccCCCCCCCccccCCCcH
Q psy3848 16 VQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVF---GSSAD-WVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDT 91 (552)
Q Consensus 16 V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~---~ss~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 91 (552)
-..+|.-.|.++.-... ..+.|++|++||.+ |+... +..
T Consensus 74 ~~sEDCL~LNIwaP~~~-----a~~~PVmV~IHGG~y~~Gs~s~~~yd-------------------------------- 116 (491)
T COG2272 74 TGSEDCLYLNIWAPEVP-----AEKLPVMVYIHGGGYIMGSGSEPLYD-------------------------------- 116 (491)
T ss_pred CccccceeEEeeccCCC-----CCCCcEEEEEeccccccCCCcccccC--------------------------------
Confidence 45677767777664411 14579999999964 22222 222
Q ss_pred HHHHHHHhCC-ceEEEEcCC-C-CCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHH---HcCCC--cEEEEEec
Q psy3848 92 ALAYLLADKG-YDVWLGNAR-G-NTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILN---KTDHT--QMIYIGHS 163 (552)
Q Consensus 92 ~la~~La~~G-y~Via~D~R-G-~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~---~~g~~--ki~lVGHS 163 (552)
...|++.| +-|+.+|+| | +|.=+.+. +... + .+ ....+..|...+++++.+ ++|.+ .|.|+|+|
T Consensus 117 --gs~La~~g~vVvVSvNYRLG~lGfL~~~~-~~~~-~---~~-~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeS 188 (491)
T COG2272 117 --GSALAARGDVVVVSVNYRLGALGFLDLSS-LDTE-D---AF-ASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGES 188 (491)
T ss_pred --hHHHHhcCCEEEEEeCcccccceeeehhh-cccc-c---cc-cccccHHHHHHHHHHHHHHHHHhCCCccceEEeecc
Confidence 34588888 999999998 1 22222111 0100 0 00 111333477788888865 45654 59999999
Q ss_pred hhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 164 MGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 164 mGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
-|++.++.+++. |...--..-+|++++...
T Consensus 189 AGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 189 AGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred chHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 999999988765 654333344566776554
No 182
>KOG2237|consensus
Probab=96.01 E-value=0.011 Score=66.48 Aligned_cols=145 Identities=21% Similarity=0.252 Sum_probs=93.2
Q ss_pred cCCCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCcccc
Q psy3848 7 HGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVV 86 (552)
Q Consensus 7 ~g~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (552)
..|.++.+.+.+.||..+.+..+... ...-.+++|-+|..||..+-+-.-.. ..
T Consensus 437 s~y~~~r~~~~SkDGt~VPM~Iv~kk-~~k~dg~~P~LLygYGay~isl~p~f-------------------------~~ 490 (712)
T KOG2237|consen 437 SDYVVERIEVSSKDGTKVPMFIVYKK-DIKLDGSKPLLLYGYGAYGISLDPSF-------------------------RA 490 (712)
T ss_pred cceEEEEEEEecCCCCccceEEEEec-hhhhcCCCceEEEEecccceeecccc-------------------------cc
Confidence 45678899999999998887665421 11223678888888887665432222 11
Q ss_pred CCCcHHHHHHHHhCCceEEEEcCCCCCCCC--CCCCCCCCcccccccChhhhhhccHHHHHHHHHHH--cCCCcEEEEEe
Q psy3848 87 AGPDTALAYLLADKGYDVWLGNARGNTYSR--SHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK--TDHTQMIYIGH 162 (552)
Q Consensus 87 ~~p~~~la~~La~~Gy~Via~D~RG~G~S~--~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~--~g~~ki~lVGH 162 (552)
..- .|.+.|.-..-.|.||-|.=. .|..-.-..+ ..+++|+. ++++++.+. +...+..+.|.
T Consensus 491 srl------~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakK---qN~f~Dfi-----a~AeyLve~gyt~~~kL~i~G~ 556 (712)
T KOG2237|consen 491 SRL------SLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKK---QNSFDDFI-----ACAEYLVENGYTQPSKLAIEGG 556 (712)
T ss_pred cee------EEEecceEEEEEeeccCcccccchhhccchhhh---cccHHHHH-----HHHHHHHHcCCCCccceeEecc
Confidence 111 155678877788999866432 1211111222 45666554 899999875 34568999999
Q ss_pred chhHHHHHHHHHcCCcchhchheeeecccccc
Q psy3848 163 SMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 163 SmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~ 194 (552)
|-||.++.++.=++|+... ++|+-.|...
T Consensus 557 SaGGlLvga~iN~rPdLF~---avia~VpfmD 585 (712)
T KOG2237|consen 557 SAGGLLVGACINQRPDLFG---AVIAKVPFMD 585 (712)
T ss_pred cCccchhHHHhccCchHhh---hhhhcCccee
Confidence 9999999999999997643 3344445444
No 183
>KOG2369|consensus
Probab=96.00 E-value=0.0093 Score=65.07 Aligned_cols=85 Identities=16% Similarity=0.183 Sum_probs=57.3
Q ss_pred HHHHHHHhCCce------EEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechh
Q psy3848 92 ALAYLLADKGYD------VWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMG 165 (552)
Q Consensus 92 ~la~~La~~Gy~------Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmG 165 (552)
.+.+.|+.-||. -..+|+| .|- | .+.. .+++.. .+...|+......|.+|+++|+||||
T Consensus 128 ~~i~~lv~~GYe~~~~l~ga~YDwR---ls~-~---~~e~-------rd~yl~-kLK~~iE~~~~~~G~kkVvlisHSMG 192 (473)
T KOG2369|consen 128 ELIENLVGIGYERGKTLFGAPYDWR---LSY-H---NSEE-------RDQYLS-KLKKKIETMYKLNGGKKVVLISHSMG 192 (473)
T ss_pred HHHHHHHhhCcccCceeeccccchh---hcc-C---ChhH-------HHHHHH-HHHHHHHHHHHHcCCCceEEEecCCc
Confidence 366778877876 4567877 111 0 1111 123332 66688888887788899999999999
Q ss_pred HHHHHHHHHcCCc-----chhchheeeeccc
Q psy3848 166 TTMFYVLTSQRPE-----YNEKLLGAISLAP 191 (552)
Q Consensus 166 G~ial~~a~~~Pe-----~~~~l~~~I~laP 191 (552)
|.+.+.+.-.+++ ..+-|.+++.+++
T Consensus 193 ~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 193 GLYVLYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred cHHHHHHHhcccccchhHHHHHHHHHHccCc
Confidence 9999999988875 2344666665554
No 184
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=95.97 E-value=0.078 Score=56.98 Aligned_cols=66 Identities=14% Similarity=0.079 Sum_probs=55.9
Q ss_pred CccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhccccc
Q psy3848 382 FISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKTRA 455 (552)
Q Consensus 382 ~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~~~~~ 455 (552)
++++|-++|.|..|.+-.|.++..++..||+.+ .+..+|+.+|... ...+...+..|+.....+..
T Consensus 260 rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K--~lr~vPN~~H~~~------~~~~~~~l~~f~~~~~~~~~ 325 (367)
T PF10142_consen 260 RLTMPKYIINATGDEFFVPDSSNFYYDKLPGEK--YLRYVPNAGHSLI------GSDVVQSLRAFYNRIQNGRP 325 (367)
T ss_pred hcCccEEEEecCCCceeccCchHHHHhhCCCCe--eEEeCCCCCcccc------hHHHHHHHHHHHHHHHcCCC
Confidence 458899999999999999999999999999976 6788999999742 16788999999988765443
No 185
>COG3150 Predicted esterase [General function prediction only]
Probab=95.41 E-value=0.047 Score=52.42 Aligned_cols=50 Identities=12% Similarity=0.129 Sum_probs=38.3
Q ss_pred cHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 140 DLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
.+.+.++.+....+.+...+||-|+||..+-.++.++. |.. +++.|...+
T Consensus 44 ~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G-----ira-v~~NPav~P 93 (191)
T COG3150 44 QALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG-----IRA-VVFNPAVRP 93 (191)
T ss_pred HHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC-----Chh-hhcCCCcCc
Confidence 44478888888888777999999999999999998865 444 456665543
No 186
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=95.39 E-value=0.43 Score=49.68 Aligned_cols=75 Identities=9% Similarity=0.162 Sum_probs=58.0
Q ss_pred CCCCcc-ccEEEEEeCCCCCCCH---HHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhcccc
Q psy3848 379 DLKFIS-TKVAFFYADNDLLTNE---QDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKTR 454 (552)
Q Consensus 379 ~l~~I~-~PvLii~G~~D~i~p~---~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~~~~ 454 (552)
+...|+ |-.+-+-|++|.+.-. +++..+...+|.... ....-+++||.+..-|.+-++++++.|.+|+.++++..
T Consensus 333 dp~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk-~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~~ 411 (415)
T COG4553 333 DPTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMK-QHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRSN 411 (415)
T ss_pred ChhheeceeEEEeecccccccccchhHHHHHHHhcChHHHH-HHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCccc
Confidence 555555 6778889999998654 556667777776542 23446899999999999999999999999999988653
No 187
>KOG1282|consensus
Probab=95.35 E-value=1.3 Score=49.02 Aligned_cols=154 Identities=15% Similarity=0.040 Sum_probs=83.6
Q ss_pred EEECC--CCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCccccccccccccc-CCCCCCCccccCCCcH
Q psy3848 15 IVQTE--DGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSD-KGIGSSADWVVAGPDT 91 (552)
Q Consensus 15 ~V~t~--DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~ 91 (552)
.|... .|..|.++.++...+ +..+|.||++-|.+|=|..- |--+.+|--.. ..| + ..+.|...
T Consensus 48 Yv~v~~~~~~~LFYwf~eS~~~---P~~dPlvLWLnGGPGCSSl~---G~~~E~GPf~v-~~~G~------tL~~N~yS- 113 (454)
T KOG1282|consen 48 YVTVNESEGRQLFYWFFESENN---PETDPLVLWLNGGPGCSSLG---GLFEENGPFRV-KYNGK------TLYLNPYS- 113 (454)
T ss_pred eEECCCCCCceEEEEEEEccCC---CCCCCEEEEeCCCCCccchh---hhhhhcCCeEE-cCCCC------cceeCCcc-
Confidence 45554 689999999987532 35689999999998755432 11222332221 111 1 12222111
Q ss_pred HHHHHHHhCCceEEEEcCC-CCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHc---CCCcEEEEEechhHH
Q psy3848 92 ALAYLLADKGYDVWLGNAR-GNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT---DHTQMIYIGHSMGTT 167 (552)
Q Consensus 92 ~la~~La~~Gy~Via~D~R-G~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~---g~~ki~lVGHSmGG~ 167 (552)
-.+ --.++-+|.| |.|.|=.... .+. ..+-+..+. |.-.++....++. ...++++.|-|.+|.
T Consensus 114 -----Wnk-~aNiLfLd~PvGvGFSYs~~~---~~~---~~~D~~~A~-d~~~FL~~wf~kfPey~~~~fyI~GESYAG~ 180 (454)
T KOG1282|consen 114 -----WNK-EANILFLDQPVGVGFSYSNTS---SDY---KTGDDGTAK-DNYEFLQKWFEKFPEYKSNDFYIAGESYAGH 180 (454)
T ss_pred -----ccc-cccEEEEecCCcCCccccCCC---CcC---cCCcHHHHH-HHHHHHHHHHHhChhhcCCCeEEecccccce
Confidence 111 1256777776 7777742221 100 112233444 6666666666553 346899999999997
Q ss_pred HHHHHHHcCCc-------chhchheeeeccccccc
Q psy3848 168 MFYVLTSQRPE-------YNEKLLGAISLAPVAYL 195 (552)
Q Consensus 168 ial~~a~~~Pe-------~~~~l~~~I~laP~~~~ 195 (552)
..=++|..--+ ..-.++|+++-.|....
T Consensus 181 YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 181 YVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDP 215 (454)
T ss_pred ehHHHHHHHHhccccccCCcccceEEEecCcccCc
Confidence 77666654221 12356776555555443
No 188
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.17 E-value=0.64 Score=46.43 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=28.0
Q ss_pred EEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCccccc
Q psy3848 388 AFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFL 430 (552)
Q Consensus 388 Lii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l 430 (552)
-.+.|++|.|.|++..+..-+.... .+.+ +++|..|.
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~~~-----~~~~-~~~Hy~F~ 205 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGRCT-----IVEI-DAPHYPFF 205 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCcCc-----EEEe-cCCCcCch
Confidence 4678999999999999988775422 3334 68999874
No 189
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.13 E-value=0.032 Score=50.33 Aligned_cols=37 Identities=14% Similarity=0.298 Sum_probs=29.9
Q ss_pred cHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcC
Q psy3848 140 DLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQR 176 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~ 176 (552)
.+.+.+..+.++.+..++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 5556777777777767899999999999999888753
No 190
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.08 E-value=0.1 Score=59.26 Aligned_cols=144 Identities=17% Similarity=0.271 Sum_probs=91.4
Q ss_pred CCceEEEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCC
Q psy3848 9 YPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAG 88 (552)
Q Consensus 9 ~p~e~~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (552)
|-.+...++..||..+.+..+-... ..-.+++|.++...|.-|.+..-.. ..
T Consensus 417 Y~s~riwa~a~dgv~VPVSLvyrkd-~~~~g~~p~lLygYGaYG~s~~p~F---------------------------s~ 468 (682)
T COG1770 417 YVSRRIWATADDGVQVPVSLVYRKD-TKLDGSAPLLLYGYGAYGISMDPSF---------------------------SI 468 (682)
T ss_pred eEEEEEEEEcCCCcEeeEEEEEecc-cCCCCCCcEEEEEeccccccCCcCc---------------------------cc
Confidence 3345566677999988875543211 0112678888888887776654333 10
Q ss_pred CcHHHHHHHHhCCceEEEEcCCCCCCCCCCC--CCCCCcccccccChhhhhhccHHHHHHHHHHH--cCCCcEEEEEech
Q psy3848 89 PDTALAYLLADKGYDVWLGNARGNTYSRSHI--SYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK--TDHTQMIYIGHSM 164 (552)
Q Consensus 89 p~~~la~~La~~Gy~Via~D~RG~G~S~~~~--~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~--~g~~ki~lVGHSm 164 (552)
..-.|.++|+---...-||-|.=...- .-.--.+ ..||.|+. ++.+++.+. ...+.++++|-|.
T Consensus 469 ----~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K---~NTf~DFI-----a~a~~Lv~~g~~~~~~i~a~GGSA 536 (682)
T COG1770 469 ----ARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNK---KNTFTDFI-----AAARHLVKEGYTSPDRIVAIGGSA 536 (682)
T ss_pred ----ceeeeecCceEEEEEEeecccccChHHHHhhhhhhc---cccHHHHH-----HHHHHHHHcCcCCccceEEeccCc
Confidence 122388899877777888866542110 0011112 45677555 777877754 2345799999999
Q ss_pred hHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 165 GTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 165 GG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
||+++-+.+-+.|+. ..++|+-.|.+..
T Consensus 537 GGmLmGav~N~~P~l---f~~iiA~VPFVDv 564 (682)
T COG1770 537 GGMLMGAVANMAPDL---FAGIIAQVPFVDV 564 (682)
T ss_pred hhHHHHHHHhhChhh---hhheeecCCccch
Confidence 999999999999954 6666776675543
No 191
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=94.64 E-value=0.11 Score=55.87 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=42.5
Q ss_pred cHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCC--cchhchheeeecccccccc
Q psy3848 140 DLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRP--EYNEKLLGAISLAPVAYLS 196 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~P--e~~~~l~~~I~laP~~~~~ 196 (552)
++.+..+++.+..|.+.++++|-|.||.+++.+++.-. ....-=.++|+++|-..+.
T Consensus 180 qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 180 QLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 55688889997788899999999999999999876421 1111125678888877654
No 192
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=94.56 E-value=0.041 Score=54.42 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=28.8
Q ss_pred cHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcC
Q psy3848 140 DLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQR 176 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~ 176 (552)
++...+..++++....++++.||||||.+|..++...
T Consensus 113 ~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 113 QVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 5556666666666667899999999999999888753
No 193
>KOG1551|consensus
Probab=94.26 E-value=0.39 Score=49.34 Aligned_cols=59 Identities=15% Similarity=0.152 Sum_probs=42.1
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhc
Q psy3848 387 VAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFS 451 (552)
Q Consensus 387 vLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~ 451 (552)
++++.+++|..+|.+.+..+.+.-|+.. .-.++ +||..-.+.+ .++.-..|.+=|++.+
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~e---Vr~~e-gGHVsayl~k--~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCE---VRYLE-GGHVSAYLFK--QDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCE---EEEee-cCceeeeehh--chHHHHHHHHHHHhhh
Confidence 7899999999999999999999999976 33344 8998755432 2333455556665443
No 194
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=94.24 E-value=0.33 Score=52.65 Aligned_cols=49 Identities=20% Similarity=0.176 Sum_probs=34.4
Q ss_pred cHHHHHHHHHHHcC----CCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccc
Q psy3848 140 DLPAEIDFILNKTD----HTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP 191 (552)
Q Consensus 140 Dl~a~I~~I~~~~g----~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP 191 (552)
|+..++.++...+. .-+++++|+|-||.+++.+|--.|-. +.++|.-+.
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~---~~~~iDns~ 217 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWL---FDGVIDNSS 217 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccc---eeEEEecCc
Confidence 66666666665533 13899999999999999999888854 444444443
No 195
>KOG2183|consensus
Probab=94.12 E-value=0.18 Score=54.51 Aligned_cols=96 Identities=20% Similarity=0.144 Sum_probs=65.6
Q ss_pred CceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC--CCcEEEEEechhHHHHHHHHHcCCc
Q psy3848 101 GYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD--HTQMIYIGHSMGTTMFYVLTSQRPE 178 (552)
Q Consensus 101 Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g--~~ki~lVGHSmGG~ial~~a~~~Pe 178 (552)
+--++-..+|=+|+|..-++.+-.+...-.|--.+.+..|....|.++++.++ ..+++.+|-|.||+++..+=..||.
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh
Confidence 45688889999999976554322222111222333343478788888888765 4589999999999999999999997
Q ss_pred chhchheeeeccccccccCC
Q psy3848 179 YNEKLLGAISLAPVAYLSRT 198 (552)
Q Consensus 179 ~~~~l~~~I~laP~~~~~~~ 198 (552)
.+..-. .+.||+.+....
T Consensus 191 iv~GAl--AaSAPvl~f~d~ 208 (492)
T KOG2183|consen 191 IVLGAL--AASAPVLYFEDT 208 (492)
T ss_pred hhhhhh--hccCceEeecCC
Confidence 644332 256777776655
No 196
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=93.03 E-value=5.4 Score=43.61 Aligned_cols=80 Identities=16% Similarity=0.078 Sum_probs=58.0
Q ss_pred eEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhc
Q psy3848 103 DVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEK 182 (552)
Q Consensus 103 ~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~ 182 (552)
.-+.+-+|=+|.|.. .|.+.. ..++..-+. |..+.+..++.-+. .+.+--|-|=||+.++.+=.-+|+-++.
T Consensus 90 NQl~vEhRfF~~SrP----~p~DW~--~Lti~QAA~-D~Hri~~A~K~iY~-~kWISTG~SKGGmTa~y~rrFyP~DVD~ 161 (448)
T PF05576_consen 90 NQLSVEHRFFGPSRP----EPADWS--YLTIWQAAS-DQHRIVQAFKPIYP-GKWISTGGSKGGMTAVYYRRFYPDDVDG 161 (448)
T ss_pred ceEEEEEeeccCCCC----CCCCcc--cccHhHhhH-HHHHHHHHHHhhcc-CCceecCcCCCceeEEEEeeeCCCCCCe
Confidence 567788999999974 333221 356777775 89898888887776 5799999999999998887778965444
Q ss_pred hheeeecccc
Q psy3848 183 LLGAISLAPV 192 (552)
Q Consensus 183 l~~~I~laP~ 192 (552)
.+. =+||.
T Consensus 162 tVa--YVAP~ 169 (448)
T PF05576_consen 162 TVA--YVAPN 169 (448)
T ss_pred eee--eeccc
Confidence 433 24554
No 197
>KOG2182|consensus
Probab=93.01 E-value=0.78 Score=50.79 Aligned_cols=118 Identities=18% Similarity=0.117 Sum_probs=80.1
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
..+|+.|+|-|=+.-...|.. +.. -.+....++-|=.|+...+|=+|.|..-
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~---------------------------~~~-~~~~~~AkkfgA~v~~lEHRFYG~S~P~ 135 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVG---------------------------NEN-LTWLQWAKKFGATVFQLEHRFYGQSSPI 135 (514)
T ss_pred CCCceEEEEcCCCCCCCCccc---------------------------cCc-chHHHHHHHhCCeeEEeeeeccccCCCC
Confidence 456777777775554555654 322 2345555556889999999999999644
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCC---CcEEEEEechhHHHHHHHHHcCCcchhchheeeecc
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDH---TQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLA 190 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~---~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~la 190 (552)
...+-.+.+ -.|.+.+.. |+..+|..+..+++. .+++..|-|.-|.++..+=..+||. +.|.++.+
T Consensus 136 ~~~st~nlk--~LSs~QALa-Dla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel---~~GsvASS 204 (514)
T KOG2182|consen 136 GDLSTSNLK--YLSSLQALA-DLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL---TVGSVASS 204 (514)
T ss_pred CCCcccchh--hhhHHHHHH-HHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchh---heeecccc
Confidence 333332332 234444443 999999988877753 2899999999999999999999965 55555443
No 198
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=92.77 E-value=0.3 Score=52.83 Aligned_cols=104 Identities=20% Similarity=0.234 Sum_probs=74.0
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCC
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHI 119 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~ 119 (552)
+.=||+-+|-=+++++.... +++-|-| |+... ++++..|+++|+.|+..|-.=+-+|.
T Consensus 245 eaLPV~e~~a~~~~sd~~av-----------~~SGDGG------Wr~lD--k~v~~~l~~~gvpVvGvdsLRYfW~~--- 302 (456)
T COG3946 245 EALPVVEVPAKPGNSDTVAV-----------FYSGDGG------WRDLD--KEVAEALQKQGVPVVGVDSLRYFWSE--- 302 (456)
T ss_pred CCCCceeeccCCCCcceEEE-----------EEecCCc------hhhhh--HHHHHHHHHCCCceeeeehhhhhhcc---
Confidence 44567777776666655444 3344433 66554 55999999999999999966444443
Q ss_pred CCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCC
Q psy3848 120 SYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRP 177 (552)
Q Consensus 120 ~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~P 177 (552)
.+-++.+. |+...|.+-..+.+..++.+||.|.|+=+.-...-+-|
T Consensus 303 -----------rtPe~~a~-Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 303 -----------RTPEQIAA-DLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred -----------CCHHHHHH-HHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 23456665 88899999999999999999999999987655444434
No 199
>KOG3967|consensus
Probab=92.53 E-value=0.65 Score=46.42 Aligned_cols=119 Identities=16% Similarity=0.135 Sum_probs=63.9
Q ss_pred CCcEEEEeCCCCCCC-ccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 40 KKEVVFLQHGVFGSS-ADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
....++|+||.+.-. .+|.. +-=|..+-+=--++| +++...+.||.|++.+.--.. +-.
T Consensus 100 ~~kLlVLIHGSGvVrAGQWAR---------------rLIIN~~Ld~GTQiP---yi~rAv~~Gygviv~N~N~~~--kfy 159 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWAR---------------RLIINEDLDSGTQIP---YIKRAVAEGYGVIVLNPNRER--KFY 159 (297)
T ss_pred ccceEEEEecCceEecchHhh---------------hhhhccccccCCcCh---HHHHHHHcCCcEEEeCCchhh--hhh
Confidence 345899999987643 46765 000111111111233 344455569999999863100 000
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchhe
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLG 185 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~ 185 (552)
.. ...+..+ -.|-.+.+. -....+......+.+++|.||.||...+.+..++|+. ++|.+
T Consensus 160 e~-k~np~ky-irt~veh~~----yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d-~~v~a 219 (297)
T KOG3967|consen 160 EK-KRNPQKY-IRTPVEHAK----YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDD-ESVFA 219 (297)
T ss_pred hc-ccCcchh-ccchHHHHH----HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCc-cceEE
Confidence 00 0011111 112233332 1222333345567899999999999999999999976 55544
No 200
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=92.19 E-value=0.86 Score=50.59 Aligned_cols=141 Identities=19% Similarity=0.183 Sum_probs=87.0
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEc-CCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGN-ARGNTYSRS 117 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D-~RG~G~S~~ 117 (552)
.+.|++|++.|.+|.+..|.. --++|--....+.+-+.. +|... +.+. =+++-+| .-|.|+|..
T Consensus 99 ~~rPvi~wlNGGPGcSS~~g~---l~elGP~rI~~~~~P~~~-----~NP~S------W~~~-adLvFiDqPvGTGfS~a 163 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVTGL---LGELGPKRIQSGTSPSYP-----DNPGS------WLDF-ADLVFIDQPVGTGFSRA 163 (498)
T ss_pred CCCceEEEecCCCChHhhhhh---hhhcCCeeeeCCCCCCCC-----CCccc------cccC-CceEEEecCcccCcccc
Confidence 468999999999999988765 223443333333322221 22111 2232 2788899 779999985
Q ss_pred CCCCCCCcccccccChhhhhhccHHHHHHHHHHHc---CC--CcEEEEEechhHHHHHHHHHcCCcchhchheeeecccc
Q psy3848 118 HISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKT---DH--TQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPV 192 (552)
Q Consensus 118 ~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~---g~--~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~ 192 (552)
... .. .-++..+.. |+..+.+.+.+.+ .. .+.+|+|.|.||.-+-.+|..-.+....+.+.+.++++
T Consensus 164 ~~~--e~-----~~d~~~~~~-D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 164 LGD--EK-----KKDFEGAGK-DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred ccc--cc-----ccchhccch-hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 221 11 223445554 7777777776653 22 38999999999998888886544332346667777776
Q ss_pred ccccC-CCchh
Q psy3848 193 AYLSR-TRSPI 202 (552)
Q Consensus 193 ~~~~~-~~~pl 202 (552)
..... ...|+
T Consensus 236 ligng~~t~Pl 246 (498)
T COG2939 236 LIGNGLWTDPL 246 (498)
T ss_pred eecCCcccChh
Confidence 65554 55554
No 201
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=91.82 E-value=0.75 Score=46.89 Aligned_cols=69 Identities=19% Similarity=0.230 Sum_probs=43.2
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhh---ccHHHHHHHHHHHcCC----CcEEEEEec
Q psy3848 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGY---FDLPAEIDFILNKTDH----TQMIYIGHS 163 (552)
Q Consensus 91 ~~la~~La~~Gy~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~---~Dl~a~I~~I~~~~g~----~ki~lVGHS 163 (552)
+.+.+.|+++||.|++.=+. . .+.-...+. .....+++.+.+..+. -+++-||||
T Consensus 37 r~lLe~La~~Gy~ViAtPy~------~------------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHS 98 (250)
T PF07082_consen 37 RYLLERLADRGYAVIATPYV------V------------TFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHS 98 (250)
T ss_pred HHHHHHHHhCCcEEEEEecC------C------------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecc
Confidence 34889999999999998764 0 011111111 1223344444443332 267889999
Q ss_pred hhHHHHHHHHHcCC
Q psy3848 164 MGTTMFYVLTSQRP 177 (552)
Q Consensus 164 mGG~ial~~a~~~P 177 (552)
||+-+-+-+.+.++
T Consensus 99 lGcklhlLi~s~~~ 112 (250)
T PF07082_consen 99 LGCKLHLLIGSLFD 112 (250)
T ss_pred cchHHHHHHhhhcc
Confidence 99999888887765
No 202
>PLN02209 serine carboxypeptidase
Probab=91.58 E-value=1.8 Score=47.81 Aligned_cols=153 Identities=14% Similarity=0.064 Sum_probs=84.3
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCccccccCCcccccccccccccCCC-CCCCccccCCCcHHHHHHH
Q psy3848 19 EDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGI-GSSADWVVAGPDTALAYLL 97 (552)
Q Consensus 19 ~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~la~~L 97 (552)
..|..+.++.++...+ +.+.|.||++-|.+|.+..+.. -..+|--. |..+ +. |.....+.|... .
T Consensus 49 ~~~~~lf~~f~es~~~---~~~~Pl~lWlnGGPG~SS~~g~---f~e~GP~~-~~~~-~~~~~~~~l~~n~~s------W 114 (437)
T PLN02209 49 EENVQFFYYFIKSDKN---PQEDPLIIWLNGGPGCSCLSGL---FFENGPLA-LKNK-VYNGSVPSLVSTTYS------W 114 (437)
T ss_pred CCCeEEEEEEEecCCC---CCCCCEEEEECCCCcHHHhhhH---HHhcCCce-eccC-CCCCCcccceeCCCc------h
Confidence 3467788888765422 3567999999999998876533 11222211 1221 11 111223333211 2
Q ss_pred HhCCceEEEEc-CCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcC---CCcEEEEEechhHHHHHHHH
Q psy3848 98 ADKGYDVWLGN-ARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTD---HTQMIYIGHSMGTTMFYVLT 173 (552)
Q Consensus 98 a~~Gy~Via~D-~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g---~~ki~lVGHSmGG~ial~~a 173 (552)
.+ -..++-+| ..|.|.|-.... .. ..+-++.+. |+.+++..+.+... ..++++.|.|.||..+-.+|
T Consensus 115 ~~-~anllfiDqPvGtGfSy~~~~-~~------~~~~~~~a~-~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a 185 (437)
T PLN02209 115 TK-TANIIFLDQPVGSGFSYSKTP-IE------RTSDTSEVK-KIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALV 185 (437)
T ss_pred hh-cCcEEEecCCCCCCccCCCCC-CC------ccCCHHHHH-HHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHH
Confidence 22 25899999 669999953221 00 011123333 66677766665543 34799999999998766666
Q ss_pred HcCCcc-------hhchheeeecccccc
Q psy3848 174 SQRPEY-------NEKLLGAISLAPVAY 194 (552)
Q Consensus 174 ~~~Pe~-------~~~l~~~I~laP~~~ 194 (552)
..--+. .=.+.|+++..|...
T Consensus 186 ~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 186 HEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHhhcccccCCceeeeeEEecCcccC
Confidence 532111 124667666665443
No 203
>PLN00413 triacylglycerol lipase
Probab=91.53 E-value=0.22 Score=54.91 Aligned_cols=39 Identities=21% Similarity=0.537 Sum_probs=31.6
Q ss_pred hhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHH
Q psy3848 136 MGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTS 174 (552)
Q Consensus 136 ~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~ 174 (552)
++++.+.+.+..++++....++++.|||+||.+|..+|+
T Consensus 265 ~ayy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 265 LAYYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred hhHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 344466677888887777778999999999999998775
No 204
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=91.49 E-value=1.1 Score=49.40 Aligned_cols=155 Identities=13% Similarity=0.065 Sum_probs=83.0
Q ss_pred EEEEECC--CCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCcc---ccccCCcccccccccccccCCCCCCCccccC
Q psy3848 13 SYIVQTE--DGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSAD---WVVAGPDTALGKATYVTSDKGIGSSADWVVA 87 (552)
Q Consensus 13 ~~~V~t~--DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~---w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (552)
+-.+... .+..+.++.++... .+.+.|.||++-|.+|.+.. +...||-. +..+.--|.......|
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~---~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~-------~~~~~~~~~~~~l~~n 108 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSEN---NPKEDPLLIWLNGGPGCSCLGGIIFENGPVG-------LKFEVFNGSAPSLFST 108 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCC---CcccCCEEEEEcCCCcHHHHHHHHHhcCCce-------eeccccCCCCCceeeC
Confidence 3344443 36777788876532 23567999999999988873 33323321 0000000111122222
Q ss_pred CCcHHHHHHHHhCCceEEEEc-CCCCCCCCCCCCCCCCcccccccCh-hhhhhccHHHHHHHHHHHcC---CCcEEEEEe
Q psy3848 88 GPDTALAYLLADKGYDVWLGN-ARGNTYSRSHISYSPMDLAFWDFSF-HEMGYFDLPAEIDFILNKTD---HTQMIYIGH 162 (552)
Q Consensus 88 ~p~~~la~~La~~Gy~Via~D-~RG~G~S~~~~~~sp~~~~~~~~s~-~~~~~~Dl~a~I~~I~~~~g---~~ki~lVGH 162 (552)
... ..+ -..|+-+| .-|.|.|..... . ..+- .+-+. |+..++..+.++.. ..+++++|.
T Consensus 109 ~~s------W~~-~anllfiDqPvGtGfSy~~~~---~-----~~~~d~~~a~-~~~~fl~~f~~~~p~~~~~~~yi~GE 172 (433)
T PLN03016 109 TYS------WTK-MANIIFLDQPVGSGFSYSKTP---I-----DKTGDISEVK-RTHEFLQKWLSRHPQYFSNPLYVVGD 172 (433)
T ss_pred CCc------hhh-cCcEEEecCCCCCCccCCCCC---C-----CccCCHHHHH-HHHHHHHHHHHhChhhcCCCEEEEcc
Confidence 111 222 25899999 669999963221 1 1111 12222 55566666554432 357999999
Q ss_pred chhHHHHHHHHHcCCcc-------hhchheeeeccccc
Q psy3848 163 SMGTTMFYVLTSQRPEY-------NEKLLGAISLAPVA 193 (552)
Q Consensus 163 SmGG~ial~~a~~~Pe~-------~~~l~~~I~laP~~ 193 (552)
|.||..+-.+|..--+. .-.++|+++-.|..
T Consensus 173 SYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 173 SYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred CccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 99998777666542211 12466766655543
No 205
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=91.42 E-value=0.35 Score=48.55 Aligned_cols=50 Identities=16% Similarity=0.186 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCc-chhchheeeeccccc
Q psy3848 143 AEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPE-YNEKLLGAISLAPVA 193 (552)
Q Consensus 143 a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe-~~~~l~~~I~laP~~ 193 (552)
+.++.+.+..+. ++++.|||.||.+|...|+..++ ..++|..+.+..++.
T Consensus 73 ~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 73 AYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 555555555554 59999999999999998887543 345676666555444
No 206
>PLN02454 triacylglycerol lipase
Probab=90.74 E-value=0.31 Score=53.10 Aligned_cols=36 Identities=22% Similarity=0.434 Sum_probs=29.3
Q ss_pred cHHHHHHHHHHHcCCCc--EEEEEechhHHHHHHHHHc
Q psy3848 140 DLPAEIDFILNKTDHTQ--MIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~k--i~lVGHSmGG~ial~~a~~ 175 (552)
++.+.|..+++++...+ +++.||||||.+|...|..
T Consensus 211 qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 211 QLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 56677888887776554 9999999999999998854
No 207
>PLN02571 triacylglycerol lipase
Probab=89.88 E-value=0.46 Score=51.80 Aligned_cols=36 Identities=17% Similarity=0.325 Sum_probs=27.7
Q ss_pred cHHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHc
Q psy3848 140 DLPAEIDFILNKTDHT--QMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~--ki~lVGHSmGG~ial~~a~~ 175 (552)
++.++|..+++++..+ ++++.||||||.+|...|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4557777777666533 68999999999999888764
No 208
>PLN02162 triacylglycerol lipase
Probab=89.50 E-value=0.43 Score=52.63 Aligned_cols=36 Identities=17% Similarity=0.369 Sum_probs=27.9
Q ss_pred ccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHH
Q psy3848 139 FDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTS 174 (552)
Q Consensus 139 ~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~ 174 (552)
+.+.+.+..++.+....++++.|||+||.+|..+|+
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 345566666666666678999999999999988764
No 209
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=89.49 E-value=0.57 Score=45.23 Aligned_cols=55 Identities=15% Similarity=0.194 Sum_probs=41.6
Q ss_pred cHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHc--C-Ccchhchheeeecccccc
Q psy3848 140 DLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQ--R-PEYNEKLLGAISLAPVAY 194 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~--~-Pe~~~~l~~~I~laP~~~ 194 (552)
++.+.|+....+-...+++++|+|+|+.++...+.. . +...++|.++++++-+..
T Consensus 66 ~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 66 NLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 666777766666666799999999999999999887 3 345678888877775443
No 210
>PLN02934 triacylglycerol lipase
Probab=89.20 E-value=0.43 Score=53.16 Aligned_cols=39 Identities=15% Similarity=0.510 Sum_probs=32.0
Q ss_pred hhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHH
Q psy3848 136 MGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTS 174 (552)
Q Consensus 136 ~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~ 174 (552)
.+++.+...+..++++....++++.|||+||.+|..+|+
T Consensus 302 ~Ay~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 302 SAYYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred hHHHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 344456788888888887789999999999999998874
No 211
>PLN02408 phospholipase A1
Probab=87.50 E-value=0.69 Score=49.73 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=28.2
Q ss_pred cHHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHc
Q psy3848 140 DLPAEIDFILNKTDHT--QMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~--ki~lVGHSmGG~ial~~a~~ 175 (552)
.+.+.|..++++++.+ ++++.|||+||.+|..+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 4557777777776643 59999999999999988764
No 212
>KOG4372|consensus
Probab=87.16 E-value=0.52 Score=50.96 Aligned_cols=21 Identities=19% Similarity=0.377 Sum_probs=17.0
Q ss_pred cCCCcEEEEEechhHHHHHHH
Q psy3848 152 TDHTQMIYIGHSMGTTMFYVL 172 (552)
Q Consensus 152 ~g~~ki~lVGHSmGG~ial~~ 172 (552)
..++++..||||+||.++...
T Consensus 147 ~si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 147 YSIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred cccceeeeeeeecCCeeeeEE
Confidence 447899999999999886543
No 213
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=86.69 E-value=0.75 Score=47.30 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=31.1
Q ss_pred cCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccccc
Q psy3848 152 TDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195 (552)
Q Consensus 152 ~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~ 195 (552)
++-++..++|||+||.+++.....+|+. ....++++|....
T Consensus 134 ~~~~~~~i~GhSlGGLfvl~aLL~~p~~---F~~y~~~SPSlWw 174 (264)
T COG2819 134 TNSERTAIIGHSLGGLFVLFALLTYPDC---FGRYGLISPSLWW 174 (264)
T ss_pred cCcccceeeeecchhHHHHHHHhcCcch---hceeeeecchhhh
Confidence 3445789999999999999999999955 4444666665543
No 214
>PLN02802 triacylglycerol lipase
Probab=85.15 E-value=0.98 Score=50.36 Aligned_cols=36 Identities=17% Similarity=0.406 Sum_probs=27.8
Q ss_pred cHHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHc
Q psy3848 140 DLPAEIDFILNKTDHT--QMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~--ki~lVGHSmGG~ial~~a~~ 175 (552)
++.+.|..+++++..+ ++++.|||+||.+|...|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 4557777777776532 69999999999999987754
No 215
>PLN02324 triacylglycerol lipase
Probab=83.72 E-value=1.4 Score=48.04 Aligned_cols=36 Identities=19% Similarity=0.428 Sum_probs=27.8
Q ss_pred cHHHHHHHHHHHcCCC--cEEEEEechhHHHHHHHHHc
Q psy3848 140 DLPAEIDFILNKTDHT--QMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~--ki~lVGHSmGG~ial~~a~~ 175 (552)
.+.+.|..+++++..+ ++.+.|||+||.+|...|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4457777777776543 69999999999999988754
No 216
>PLN02753 triacylglycerol lipase
Probab=83.68 E-value=1.2 Score=49.79 Aligned_cols=36 Identities=14% Similarity=0.324 Sum_probs=27.9
Q ss_pred cHHHHHHHHHHHcCC-----CcEEEEEechhHHHHHHHHHc
Q psy3848 140 DLPAEIDFILNKTDH-----TQMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~-----~ki~lVGHSmGG~ial~~a~~ 175 (552)
.+.+.|..++++++. .++++.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 445777777776642 479999999999999988753
No 217
>PLN02310 triacylglycerol lipase
Probab=83.26 E-value=1.4 Score=48.09 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=25.8
Q ss_pred cHHHHHHHHHHHcC----CCcEEEEEechhHHHHHHHHH
Q psy3848 140 DLPAEIDFILNKTD----HTQMIYIGHSMGTTMFYVLTS 174 (552)
Q Consensus 140 Dl~a~I~~I~~~~g----~~ki~lVGHSmGG~ial~~a~ 174 (552)
.+.++|..+.+.+. ..++++.|||+||.+|...|.
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 34466666666552 237999999999999988774
No 218
>PLN02761 lipase class 3 family protein
Probab=83.23 E-value=1.3 Score=49.57 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHHcC------CCcEEEEEechhHHHHHHHHHc
Q psy3848 140 DLPAEIDFILNKTD------HTQMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 140 Dl~a~I~~I~~~~g------~~ki~lVGHSmGG~ial~~a~~ 175 (552)
++.+.|..+++.++ ..++++.|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 45577777777762 2369999999999999987743
No 219
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=83.23 E-value=2.2 Score=41.38 Aligned_cols=44 Identities=18% Similarity=0.230 Sum_probs=32.9
Q ss_pred cHHHHHHHHHHHc-CCCcEEEEEechhHHHHHHHHHcCCcchhch
Q psy3848 140 DLPAEIDFILNKT-DHTQMIYIGHSMGTTMFYVLTSQRPEYNEKL 183 (552)
Q Consensus 140 Dl~a~I~~I~~~~-g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l 183 (552)
+|.++++.|.... ....+.++|||+|+.++-..+.+.+..++.+
T Consensus 93 ~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddv 137 (177)
T PF06259_consen 93 RLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDV 137 (177)
T ss_pred HHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccE
Confidence 7778888777665 3457999999999999988877745444444
No 220
>PLN02719 triacylglycerol lipase
Probab=82.85 E-value=1.4 Score=49.25 Aligned_cols=36 Identities=14% Similarity=0.310 Sum_probs=27.7
Q ss_pred cHHHHHHHHHHHcCC-----CcEEEEEechhHHHHHHHHHc
Q psy3848 140 DLPAEIDFILNKTDH-----TQMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~-----~ki~lVGHSmGG~ial~~a~~ 175 (552)
++.+.|..+++++.. .++.+.|||+||.+|...|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 455777777776642 379999999999999988753
No 221
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=81.73 E-value=3.1 Score=46.39 Aligned_cols=64 Identities=11% Similarity=-0.086 Sum_probs=48.0
Q ss_pred ccEEEEEeCCCCCCCHHHHHHHHHhC----CCC-----ccceEEEeCCCCcccccccccchHHHHHHHHHHHHh
Q psy3848 385 TKVAFFYADNDLLTNEQDVKELYTLL----PNP-----VGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 449 (552)
Q Consensus 385 ~PvLii~G~~D~i~p~~~~~~l~~~l----p~~-----~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~ 449 (552)
=++|++||-.|.++++..+.+.++++ +.. .-.++..+|+.+|..--.+ ...-+++..|.+|.++
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g-~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG-PDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC-CCCCCHHHHHHHHHhC
Confidence 57999999999999999987776654 321 2345677999999875433 3344789999999974
No 222
>PLN03037 lipase class 3 family protein; Provisional
Probab=80.24 E-value=2.1 Score=47.90 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHcC----CCcEEEEEechhHHHHHHHHHc
Q psy3848 141 LPAEIDFILNKTD----HTQMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 141 l~a~I~~I~~~~g----~~ki~lVGHSmGG~ial~~a~~ 175 (552)
+.++|..+.+.+. ..++.+.|||+||.+|...|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4456666665553 2369999999999999887743
No 223
>KOG1516|consensus
Probab=79.46 E-value=7 Score=43.69 Aligned_cols=69 Identities=23% Similarity=0.288 Sum_probs=42.2
Q ss_pred HHHHHhCCceEEEEcCC----CCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHH---cC--CCcEEEEEech
Q psy3848 94 AYLLADKGYDVWLGNAR----GNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNK---TD--HTQMIYIGHSM 164 (552)
Q Consensus 94 a~~La~~Gy~Via~D~R----G~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~---~g--~~ki~lVGHSm 164 (552)
...+.++..-|+.+++| |+.-. +... .|. ++.+. |...+++++.+. .| .+++.++|||.
T Consensus 137 ~~~~~~~~VVvVt~~YRLG~lGF~st-~d~~-~~g-----N~gl~-----Dq~~AL~wv~~~I~~FGGdp~~vTl~G~sa 204 (545)
T KOG1516|consen 137 AYVLLLKDVVVVTINYRLGPLGFLST-GDSA-APG-----NLGLF-----DQLLALRWVKDNIPSFGGDPKNVTLFGHSA 204 (545)
T ss_pred hhccccCCEEEEEecccceeceeeec-CCCC-CCC-----cccHH-----HHHHHHHHHHHHHHhcCCCCCeEEEEeech
Confidence 33455556778888887 32211 1111 122 33333 555788888765 34 45799999999
Q ss_pred hHHHHHHHHH
Q psy3848 165 GTTMFYVLTS 174 (552)
Q Consensus 165 GG~ial~~a~ 174 (552)
||..+..+..
T Consensus 205 Ga~~v~~l~~ 214 (545)
T KOG1516|consen 205 GAASVSLLTL 214 (545)
T ss_pred hHHHHHHHhc
Confidence 9999877654
No 224
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=79.45 E-value=2.6 Score=37.88 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=21.2
Q ss_pred EEEECCCCcEEEEEEEcCCCCCCCCCCCcEEEEeCCCCCCCcccc
Q psy3848 14 YIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWV 58 (552)
Q Consensus 14 ~~V~t~DG~~L~~~~i~~~~~~~~~g~~~~VlLlHG~~~ss~~w~ 58 (552)
++..+-||..+.+-+..... .+..||||+||++||-..+.
T Consensus 70 hf~t~I~g~~iHFih~rs~~-----~~aiPLll~HGWPgSf~Ef~ 109 (112)
T PF06441_consen 70 HFKTEIDGLDIHFIHVRSKR-----PNAIPLLLLHGWPGSFLEFL 109 (112)
T ss_dssp EEEEEETTEEEEEEEE--S------TT-EEEEEE--SS--GGGGH
T ss_pred CeeEEEeeEEEEEEEeeCCC-----CCCeEEEEECCCCccHHhHH
Confidence 44455568666654444432 46789999999999876554
No 225
>KOG4569|consensus
Probab=78.18 E-value=2.5 Score=44.91 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=30.7
Q ss_pred cHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHc
Q psy3848 140 DLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~ 175 (552)
.+.+.++.+++.+..-++.+-|||+||.+|..+|..
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 566888888888887789999999999999988864
No 226
>PLN02847 triacylglycerol lipase
Probab=78.10 E-value=2.7 Score=47.90 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=24.5
Q ss_pred HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHc
Q psy3848 143 AEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 143 a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~ 175 (552)
..+..++.....-+++++|||+||.+|..++..
T Consensus 239 ~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 239 PCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 444445555555589999999999999887764
No 227
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=70.20 E-value=7.1 Score=41.85 Aligned_cols=42 Identities=14% Similarity=0.280 Sum_probs=29.1
Q ss_pred cCCCcEEEEEechhHHHHHHHHHcCCcch--hchheeeeccccc
Q psy3848 152 TDHTQMIYIGHSMGTTMFYVLTSQRPEYN--EKLLGAISLAPVA 193 (552)
Q Consensus 152 ~g~~ki~lVGHSmGG~ial~~a~~~Pe~~--~~l~~~I~laP~~ 193 (552)
.|..++.+||||+|+-+.+.++..-.++. .-|..+++++.+.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 46678999999999999998876555431 1245556665443
No 228
>KOG2521|consensus
Probab=70.07 E-value=74 Score=34.30 Aligned_cols=71 Identities=14% Similarity=0.228 Sum_probs=49.4
Q ss_pred cccEEEEEeCCCCCCCHHHHHHHHHhCCC-CccceEEEeCCCCcccccccccchHHHHHHHHHHHHhhcccccc
Q psy3848 384 STKVAFFYADNDLLTNEQDVKELYTLLPN-PVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKTRAR 456 (552)
Q Consensus 384 ~~PvLii~G~~D~i~p~~~~~~l~~~lp~-~~~~~~v~~~~~gH~~~l~~~~~~~~V~~~il~fL~~~~~~~~~ 456 (552)
..+.+.+++..|.++|.+..+++.+.... ......+.+.+.-|..++ ..-+........+|++........
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~--r~~p~~y~~~~~~Fl~~~~~~~~~ 296 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHF--RSFPKTYLKKCSEFLRSVISSYNL 296 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeee--ccCcHHHHHHHHHHHHhcccccCC
Confidence 35788888999999999999888554332 111234557777887754 446667888999999887654433
No 229
>KOG2029|consensus
Probab=66.77 E-value=7.7 Score=44.15 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=24.0
Q ss_pred CCCcccccccccchHHHHHHHHHHHHhhcc
Q psy3848 423 YFNHLDFLWAKDVKALVYNDLLLVLKTFSK 452 (552)
Q Consensus 423 ~~gH~~~l~~~~~~~~V~~~il~fL~~~~~ 452 (552)
..+|+.+........-.|+.++.||++...
T Consensus 660 ~~dHL~icKP~~rds~lY~~ll~fI~e~i~ 689 (697)
T KOG2029|consen 660 DDDHLNICKPSERDSFLYQRLLLFIREAIL 689 (697)
T ss_pred ccccccccCcccchhhHHHHHHHHHHHHHH
Confidence 379999887766666789999999987654
No 230
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=63.61 E-value=4.2 Score=42.60 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=27.8
Q ss_pred CcEEEEEechhHHHHHHHHHcCCcchhchheeeeccccc
Q psy3848 155 TQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVA 193 (552)
Q Consensus 155 ~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~ 193 (552)
+.-+++|-|+||.+++..+.++|+....| ++.+|..
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V---~s~Sps~ 212 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHV---LSQSGSF 212 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhcee---eccCCcc
Confidence 35789999999999999999999765554 3444433
No 231
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=60.55 E-value=35 Score=37.11 Aligned_cols=45 Identities=13% Similarity=-0.052 Sum_probs=39.6
Q ss_pred CccccEEEEEeCCCCCCCHHHHHHHHHhCCCCccceEEEeCCCCccc
Q psy3848 382 FISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLD 428 (552)
Q Consensus 382 ~I~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~~~~~v~~~~~gH~~ 428 (552)
++.+|-+++.|..|.+-.|.++...+..||+.+ .+..+|+..|..
T Consensus 327 RLalpKyivnaSgDdff~pDsa~lYyd~LPG~k--aLrmvPN~~H~~ 371 (507)
T COG4287 327 RLALPKYIVNASGDDFFVPDSANLYYDDLPGEK--ALRMVPNDPHNL 371 (507)
T ss_pred hccccceeecccCCcccCCCccceeeccCCCce--eeeeCCCCcchh
Confidence 457899999999999999999999999999987 567789999974
No 232
>KOG2624|consensus
Probab=55.40 E-value=6.7 Score=42.92 Aligned_cols=49 Identities=24% Similarity=0.612 Sum_probs=35.1
Q ss_pred cccceeeeccccccchhhhHHHhh------cccch---hhhhhcccc--ccccccccccC
Q psy3848 324 ISTKVAFFYADNDLLTNEQVTIRL------GLVDL---FRKFRQFDY--GKDENLHIYNS 372 (552)
Q Consensus 324 i~~~~~~~~~~~d~~~~~~~~~~~------~~~~~---~~~f~~~~~--~~~~~~~~~~~ 372 (552)
|..|++++++++|++++++.+.++ .+.+. ...|+|+|| +.+-...+|+.
T Consensus 331 i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~ 390 (403)
T KOG2624|consen 331 IKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDP 390 (403)
T ss_pred cccCEEEEecCCcccCCHHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHH
Confidence 688999999999999999876654 22222 466888888 66545555543
No 233
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.57 E-value=13 Score=36.32 Aligned_cols=43 Identities=19% Similarity=0.222 Sum_probs=32.4
Q ss_pred HHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchhe
Q psy3848 143 AEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLG 185 (552)
Q Consensus 143 a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~ 185 (552)
+.-.++++..=....++-|-||||..++.+..++|+...++++
T Consensus 89 AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvia 131 (227)
T COG4947 89 AYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIA 131 (227)
T ss_pred HHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhhee
Confidence 3444566543334688999999999999999999988777633
No 234
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=50.28 E-value=18 Score=40.30 Aligned_cols=40 Identities=20% Similarity=0.244 Sum_probs=34.3
Q ss_pred CCcEEEEEechhHHHHHHHHHcCCcchhchheeeecccccccc
Q psy3848 154 HTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLS 196 (552)
Q Consensus 154 ~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~laP~~~~~ 196 (552)
...-++.|.|.||-.++..|.++|+ ...|+++-+|+....
T Consensus 114 p~~sY~~GcS~GGRqgl~~AQryP~---dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 114 PKYSYFSGCSTGGRQGLMAAQRYPE---DFDGILAGAPAINWT 153 (474)
T ss_pred CCceEEEEeCCCcchHHHHHHhChh---hcCeEEeCCchHHHH
Confidence 4579999999999999999999994 577778889987753
No 235
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=48.05 E-value=26 Score=36.77 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=26.2
Q ss_pred HHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcC
Q psy3848 142 PAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQR 176 (552)
Q Consensus 142 ~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~ 176 (552)
.+.+..+++.+.-.++.+-|||+||++|.-+..++
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 34444556666667899999999999988776554
No 236
>KOG4540|consensus
Probab=48.05 E-value=26 Score=36.77 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=26.2
Q ss_pred HHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcC
Q psy3848 142 PAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQR 176 (552)
Q Consensus 142 ~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~ 176 (552)
.+.+..+++.+.-.++.+-|||+||++|.-+..++
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 34444556666667899999999999988776554
No 237
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=47.41 E-value=48 Score=34.84 Aligned_cols=62 Identities=6% Similarity=-0.047 Sum_probs=46.0
Q ss_pred cccEEEEEeCCCCCCCHHHHHHHHHhCCCCc----------------------cceEEEeCCCCcccccccccchHHHHH
Q psy3848 384 STKVAFFYADNDLLTNEQDVKELYTLLPNPV----------------------GLFKVNFTYFNHLDFLWAKDVKALVYN 441 (552)
Q Consensus 384 ~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~----------------------~~~~v~~~~~gH~~~l~~~~~~~~V~~ 441 (552)
.++||+..|+.|.+||.-..+.+.+.|.... .+.++.+-++||+- . ..|+..+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV---~-~qP~~al~ 308 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA---E-YRPNETFI 308 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCC---C-cCHHHHHH
Confidence 3799999999999999988888888876211 02334455789974 2 47888888
Q ss_pred HHHHHHHh
Q psy3848 442 DLLLVLKT 449 (552)
Q Consensus 442 ~il~fL~~ 449 (552)
-|-+||+.
T Consensus 309 m~~~fi~~ 316 (319)
T PLN02213 309 MFQRWISG 316 (319)
T ss_pred HHHHHHcC
Confidence 88888853
No 238
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=46.73 E-value=45 Score=33.49 Aligned_cols=23 Identities=13% Similarity=0.140 Sum_probs=19.1
Q ss_pred CCcEEEEEechhHHHHHHHHHcC
Q psy3848 154 HTQMIYIGHSMGTTMFYVLTSQR 176 (552)
Q Consensus 154 ~~ki~lVGHSmGG~ial~~a~~~ 176 (552)
-++++++|+|+|+.++...+.+.
T Consensus 47 ~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 47 GGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CCCEEEEEECHHHHHHHHHHHHH
Confidence 36899999999999998876653
No 239
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=44.46 E-value=58 Score=34.20 Aligned_cols=64 Identities=13% Similarity=0.105 Sum_probs=40.9
Q ss_pred eEEEEcCC-CCCCCCCCCCCCCCcccccccCh-hhhhhccHHHHHHHHHHHc---CCCcEEEEEechhHHHHHHHHHc
Q psy3848 103 DVWLGNAR-GNTYSRSHISYSPMDLAFWDFSF-HEMGYFDLPAEIDFILNKT---DHTQMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 103 ~Via~D~R-G~G~S~~~~~~sp~~~~~~~~s~-~~~~~~Dl~a~I~~I~~~~---g~~ki~lVGHSmGG~ial~~a~~ 175 (552)
.|+-+|.| |.|.|-.... . .++- ++.+. |+..++..+.++. ...++++.|-|.||..+-.+|..
T Consensus 3 NvLfiDqPvGvGfSy~~~~---~-----~~~~d~~~a~-d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~ 71 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTP---I-----DKTGDISEVK-RTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 71 (319)
T ss_pred cEEEecCCCCCCCCCCCCC---C-----CccccHHHHH-HHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHH
Confidence 57788987 8998853211 1 1111 22332 6666776666554 34579999999999877777654
No 240
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=42.52 E-value=34 Score=33.62 Aligned_cols=39 Identities=36% Similarity=0.486 Sum_probs=32.1
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEc
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGN 108 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D 108 (552)
++++.||++-|+.|+.-.=.. +.+.+.|.++|+.|+++|
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA-------------------------------~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIA-------------------------------NALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHH-------------------------------HHHHHHHHHcCCeEEEec
Confidence 567899999999998765433 458888999999999998
No 241
>KOG4388|consensus
Probab=39.94 E-value=30 Score=39.56 Aligned_cols=21 Identities=14% Similarity=0.471 Sum_probs=17.2
Q ss_pred CcEEEEEechhHHHHHHHHHc
Q psy3848 155 TQMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 155 ~ki~lVGHSmGG~ial~~a~~ 175 (552)
++++++|-|.||.+.+..+.+
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr 489 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALR 489 (880)
T ss_pred ceEEEeccCCCcceeehhHHH
Confidence 689999999999876665554
No 242
>PLN02209 serine carboxypeptidase
Probab=38.33 E-value=80 Score=34.96 Aligned_cols=62 Identities=10% Similarity=-0.025 Sum_probs=46.8
Q ss_pred cccEEEEEeCCCCCCCHHHHHHHHHhCCCCc----------------------cceEEEeCCCCcccccccccchHHHHH
Q psy3848 384 STKVAFFYADNDLLTNEQDVKELYTLLPNPV----------------------GLFKVNFTYFNHLDFLWAKDVKALVYN 441 (552)
Q Consensus 384 ~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~----------------------~~~~v~~~~~gH~~~l~~~~~~~~V~~ 441 (552)
.++||++.|+.|.+|+.-.++...+.+.-.. .+.++.+.++||+- . ..++..+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmV---p-~qP~~al~ 426 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTA---E-YLPEESSI 426 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCc---C-cCHHHHHH
Confidence 3799999999999999998888888775210 02344567799974 2 48888998
Q ss_pred HHHHHHHh
Q psy3848 442 DLLLVLKT 449 (552)
Q Consensus 442 ~il~fL~~ 449 (552)
-+-+|+..
T Consensus 427 m~~~fi~~ 434 (437)
T PLN02209 427 MFQRWISG 434 (437)
T ss_pred HHHHHHcC
Confidence 88899853
No 243
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=37.34 E-value=66 Score=36.15 Aligned_cols=37 Identities=24% Similarity=0.164 Sum_probs=30.3
Q ss_pred cHHHHHHHHHHHcCC--CcEEEEEechhHHHHHHHHHcC
Q psy3848 140 DLPAEIDFILNKTDH--TQMIYIGHSMGTTMFYVLTSQR 176 (552)
Q Consensus 140 Dl~a~I~~I~~~~g~--~ki~lVGHSmGG~ial~~a~~~ 176 (552)
-+.+.|..-++.+|- .++++-|.|||+.=|+.|++..
T Consensus 340 ~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 340 GIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 555777777777774 4799999999999999999864
No 244
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=36.18 E-value=95 Score=34.33 Aligned_cols=62 Identities=6% Similarity=-0.047 Sum_probs=47.1
Q ss_pred cccEEEEEeCCCCCCCHHHHHHHHHhCCCCc----------------------cceEEEeCCCCcccccccccchHHHHH
Q psy3848 384 STKVAFFYADNDLLTNEQDVKELYTLLPNPV----------------------GLFKVNFTYFNHLDFLWAKDVKALVYN 441 (552)
Q Consensus 384 ~~PvLii~G~~D~i~p~~~~~~l~~~lp~~~----------------------~~~~v~~~~~gH~~~l~~~~~~~~V~~ 441 (552)
.++||++.|+.|.+||.-.++.+.+.|.-.. .+.++.+-++||+- . ..++..+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmV---p-~qP~~al~ 422 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA---E-YRPNETFI 422 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCC---C-CCHHHHHH
Confidence 4799999999999999999988888775210 02344566799985 2 47888999
Q ss_pred HHHHHHHh
Q psy3848 442 DLLLVLKT 449 (552)
Q Consensus 442 ~il~fL~~ 449 (552)
-+-+||+.
T Consensus 423 m~~~Fi~~ 430 (433)
T PLN03016 423 MFQRWISG 430 (433)
T ss_pred HHHHHHcC
Confidence 99999853
No 245
>KOG2093|consensus
Probab=35.93 E-value=20 Score=42.47 Aligned_cols=47 Identities=34% Similarity=0.604 Sum_probs=37.6
Q ss_pred cccchhHHHHHhhcCCCchh-HHHHhhhchhhHHHHhhcccCCCCCCCC
Q psy3848 504 TKRSDQTFMQKISAFPGDFS-RKMERKWNNSTMREMLNHWIRPEPTPVP 551 (552)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (552)
+|+|+|--|++++++||++. |.||.- -.-...+|++.|+.-+..|.+
T Consensus 901 ~~~s~ql~~~~ls~~~~~~~p~P~E~~-~e~~vk~l~~~w~S~~~~p~~ 948 (1016)
T KOG2093|consen 901 FKVSGQLVMEKLSALPGKVGPRPMEKP-LEHDVKELLSFWDSASASPLD 948 (1016)
T ss_pred HhhhhhHhHhHHHhcccccCCCcccch-hhhhHHHHHhhhhcccccccc
Confidence 56789999999999999986 677766 345678999999987666644
No 246
>KOG1202|consensus
Probab=34.22 E-value=67 Score=39.98 Aligned_cols=54 Identities=20% Similarity=0.143 Sum_probs=35.0
Q ss_pred ChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCcchhchheeeecc
Q psy3848 132 SFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLA 190 (552)
Q Consensus 132 s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe~~~~l~~~I~la 190 (552)
|+++.+. -.|+.|+.--...+-.++|.|.|+-+++.+|.+-.+...... +|++.
T Consensus 2163 Sies~A~----~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~-lillD 2216 (2376)
T KOG1202|consen 2163 SIESLAA----YYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAP-LILLD 2216 (2376)
T ss_pred hHHHHHH----HHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCc-EEEec
Confidence 4665554 334455444445589999999999999999987665433332 44443
No 247
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=33.42 E-value=49 Score=33.69 Aligned_cols=26 Identities=15% Similarity=0.188 Sum_probs=21.8
Q ss_pred HHHHcCCCcEEEEEechhHHHHHHHH
Q psy3848 148 ILNKTDHTQMIYIGHSMGTTMFYVLT 173 (552)
Q Consensus 148 I~~~~g~~ki~lVGHSmGG~ial~~a 173 (552)
++...|+.+-.++|||+|-..|+.++
T Consensus 75 ~l~~~Gi~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 75 LWRSWGVRPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred HHHHcCCcccEEEecCHHHHHHHHHh
Confidence 34568999999999999998888765
No 248
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=31.75 E-value=55 Score=33.52 Aligned_cols=28 Identities=18% Similarity=-0.003 Sum_probs=22.5
Q ss_pred HHHHHcCCCcEEEEEechhHHHHHHHHH
Q psy3848 147 FILNKTDHTQMIYIGHSMGTTMFYVLTS 174 (552)
Q Consensus 147 ~I~~~~g~~ki~lVGHSmGG~ial~~a~ 174 (552)
.++...|+.+..++|||+|=..|+.++.
T Consensus 68 ~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 68 RALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 3445678889999999999988887653
No 249
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=31.11 E-value=34 Score=35.60 Aligned_cols=28 Identities=25% Similarity=0.229 Sum_probs=22.5
Q ss_pred HHHHHHcCCCcEEEEEechhHHHHHHHH
Q psy3848 146 DFILNKTDHTQMIYIGHSMGTTMFYVLT 173 (552)
Q Consensus 146 ~~I~~~~g~~ki~lVGHSmGG~ial~~a 173 (552)
-.++...|+.+-.++|||+|=..|+.++
T Consensus 75 ~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 75 ARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhcccccccceeeccchhhHHHHHHC
Confidence 3445678899999999999998888665
No 250
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=29.57 E-value=58 Score=32.90 Aligned_cols=27 Identities=22% Similarity=0.233 Sum_probs=21.3
Q ss_pred HHHHcC-CCcEEEEEechhHHHHHHHHH
Q psy3848 148 ILNKTD-HTQMIYIGHSMGTTMFYVLTS 174 (552)
Q Consensus 148 I~~~~g-~~ki~lVGHSmGG~ial~~a~ 174 (552)
+..+.| +.+-.++|||+|=..|+.++.
T Consensus 75 ~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 75 KLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 334566 889999999999988887663
No 251
>PF02006 DUF137: Protein of unknown function DUF137; InterPro: IPR002855 The archaeal proteins in this family have no known function.
Probab=29.55 E-value=1.1e+02 Score=29.79 Aligned_cols=39 Identities=23% Similarity=0.084 Sum_probs=33.3
Q ss_pred ccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCC
Q psy3848 72 VTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNAR 110 (552)
Q Consensus 72 ~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~R 110 (552)
..|..||.+.+.=-+..++-+-.+.|.+-|-.|+++|+=
T Consensus 81 ~v~~~GIy~ADVVLVPLEDGDR~EAL~~mGK~VIaIDLN 119 (178)
T PF02006_consen 81 KVSKEGIYSADVVLVPLEDGDRTEALVKMGKTVIAIDLN 119 (178)
T ss_pred eECcccceeccEEEeccCCCcHHHHHHHcCCeEEEEeCC
Confidence 346789988877777788888999999999999999994
No 252
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=28.65 E-value=48 Score=33.26 Aligned_cols=27 Identities=19% Similarity=0.142 Sum_probs=23.0
Q ss_pred ccEEEEEeCCCCCCCHHHHHHHHHhCC
Q psy3848 385 TKVAFFYADNDLLTNEQDVKELYTLLP 411 (552)
Q Consensus 385 ~PvLii~G~~D~i~p~~~~~~l~~~lp 411 (552)
.|++++||+.|.+|.+...+++.+..-
T Consensus 170 ~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 170 YPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCEEEEecCCCCccCcchHHHHHHHHH
Confidence 599999999999999998887766643
No 253
>PRK12467 peptide synthase; Provisional
Probab=26.52 E-value=1.5e+02 Score=41.89 Aligned_cols=86 Identities=22% Similarity=0.228 Sum_probs=56.7
Q ss_pred CcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCCCC
Q psy3848 41 KEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHIS 120 (552)
Q Consensus 41 ~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~~~ 120 (552)
-+.|++.|...+....+.. ++..|.. +..|+++..+|.-.-..
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~---------------------------------l~~~l~~-~~~~~~l~~~~~~~d~~--- 3734 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEP---------------------------------LAVILEG-DRHVLGLTCRHLLDDGW--- 3734 (3956)
T ss_pred ccceeeechhhcchhhhHH---------------------------------HHHHhCC-CCcEEEEeccccccccC---
Confidence 3569999998887765544 6666654 56888888765421110
Q ss_pred CCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHc
Q psy3848 121 YSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQ 175 (552)
Q Consensus 121 ~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~ 175 (552)
. ..++.+++. ..+++++......+..+.|+|+||.++..++.+
T Consensus 3735 -~-------~~~~~~~~~----~y~~~~~~~~~~~p~~l~g~s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3735 -Q-------DTSLQAMAV----QYADYILWQQAKGPYGLLGWSLGGTLARLVAEL 3777 (3956)
T ss_pred -C-------ccchHHHHH----HHHHHHHHhccCCCeeeeeeecchHHHHHHHHH
Confidence 0 224555554 445555554455578999999999999988764
No 254
>PRK13761 hypothetical protein; Provisional
Probab=26.39 E-value=1.2e+02 Score=30.85 Aligned_cols=39 Identities=23% Similarity=0.097 Sum_probs=33.9
Q ss_pred ccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCC
Q psy3848 72 VTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNAR 110 (552)
Q Consensus 72 ~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~R 110 (552)
..|..||.+.+.=.+..++-+-++.|.+-|-.|+++|+=
T Consensus 142 ~v~~~GIy~ADVVLVPLEDGDR~EaL~~mGK~VI~IDLN 180 (248)
T PRK13761 142 KVSEDGIYSADVVLVPLEDGDRTEALVKMGKTVIAIDLN 180 (248)
T ss_pred eECcccceeccEEEecCCCCcHHHHHHHcCCeEEEEeCC
Confidence 346789988888888888888999999999999999993
No 255
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=25.61 E-value=9.1 Score=37.62 Aligned_cols=105 Identities=23% Similarity=0.138 Sum_probs=58.8
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSH 118 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy~Via~D~RG~G~S~~~ 118 (552)
+.-|.+++.||+.+....-.. .+..++..++.+...+....|.+...
T Consensus 47 ~~~p~v~~~h~~~~~~~~~~~---------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~ 93 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQSLG---------------------------------YAVLLAEKGYRVLAGDASLFGESGGD 93 (299)
T ss_pred ccCceEEeccCccccccCcch---------------------------------HHHHhhhceeEEeeeccccccccccc
Confidence 467889999999999988766 67778888888888775333333211
Q ss_pred --CCCCC--CcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCCc
Q psy3848 119 --ISYSP--MDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPE 178 (552)
Q Consensus 119 --~~~sp--~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~Pe 178 (552)
+...+ ....+|.-....... ++...-...... ...+....|+++|+..+...+...+.
T Consensus 94 ~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~ 155 (299)
T COG1073 94 PRGLADSEGYAEDFSAAVLLLLSE-GVLDKDYRLLGA-SLGPRILAGLSLGGPSAGALLAWGPT 155 (299)
T ss_pred cccccCccccccccchhheeeecc-ccccHHHHHHhh-hcCcceEEEEEeeccchHHHhhcchh
Confidence 10011 111222111111111 111111011111 12578889999999998888887763
No 256
>TIGR03586 PseI pseudaminic acid synthase.
Probab=24.73 E-value=2.7e+02 Score=29.75 Aligned_cols=83 Identities=12% Similarity=0.163 Sum_probs=54.4
Q ss_pred CCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCc-eEEEEcCCCCCCCCCC
Q psy3848 40 KKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGY-DVWLGNARGNTYSRSH 118 (552)
Q Consensus 40 ~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy-~Via~D~RG~G~S~~~ 118 (552)
.+.||+|-=|+ ++...|.. .+.++.++|. +|++.. +-|..+
T Consensus 133 ~gkPvilstG~-~t~~Ei~~---------------------------------Av~~i~~~g~~~i~Llh----C~s~YP 174 (327)
T TIGR03586 133 TGKPIIMSTGI-ATLEEIQE---------------------------------AVEACREAGCKDLVLLK----CTSSYP 174 (327)
T ss_pred cCCcEEEECCC-CCHHHHHH---------------------------------HHHHHHHCCCCcEEEEe----cCCCCC
Confidence 46688899998 57777777 6778888887 677766 223321
Q ss_pred CCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEechhHHHHHHHHHcCC
Q psy3848 119 ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRP 177 (552)
Q Consensus 119 ~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSmGG~ial~~a~~~P 177 (552)
.|. .++ || ..|..+++.++ -++-+..|+.|-.++++..+...
T Consensus 175 ---~~~---------~~~---nL-~~i~~lk~~f~-~pVG~SDHt~G~~~~~aAva~GA 216 (327)
T TIGR03586 175 ---APL---------EDA---NL-RTIPDLAERFN-VPVGLSDHTLGILAPVAAVALGA 216 (327)
T ss_pred ---CCc---------ccC---CH-HHHHHHHHHhC-CCEEeeCCCCchHHHHHHHHcCC
Confidence 111 111 33 45677888886 46878999999777766655433
No 257
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=23.76 E-value=43 Score=38.55 Aligned_cols=49 Identities=16% Similarity=0.106 Sum_probs=36.9
Q ss_pred cccEEEEEeCCCCCCCHHHHHHHHHhCC-----CCccceEEEeCCCCccccccc
Q psy3848 384 STKVAFFYADNDLLTNEQDVKELYTLLP-----NPVGLFKVNFTYFNHLDFLWA 432 (552)
Q Consensus 384 ~~PvLii~G~~D~i~p~~~~~~l~~~lp-----~~~~~~~v~~~~~gH~~~l~~ 432 (552)
-.|.+|+||..|.++|+....+-|-.+. ....+.++++++.-|+|-+..
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~ 608 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLD 608 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhcc
Confidence 4799999999999999877655444332 224567889999999996533
No 258
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=21.93 E-value=3.2e+02 Score=27.82 Aligned_cols=64 Identities=17% Similarity=0.305 Sum_probs=43.6
Q ss_pred CCCcEEEEeCCCCCCCccccccCCcccccccccccccCCCCCCCccccCCCcHHHHHHHHhCCc-eEEEEcCCCCCCCCC
Q psy3848 39 GKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGY-DVWLGNARGNTYSRS 117 (552)
Q Consensus 39 g~~~~VlLlHG~~~ss~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~la~~La~~Gy-~Via~D~RG~G~S~~ 117 (552)
.+..+|++.||..-++...+. .+-..|.+.|| .|++...-|+-
T Consensus 136 k~e~~vlmgHGt~h~s~~~Ya--------------------------------cLd~~~~~~~f~~v~v~~ve~yP---- 179 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAYA--------------------------------CLDHVLDEYGFDNVFVAAVEGYP---- 179 (265)
T ss_pred cCeEEEEEecCCCccHHHHHH--------------------------------HHHHHHHhcCCCceEEEEecCCC----
Confidence 456788999998877766655 36667888899 78887776431
Q ss_pred CCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEE
Q psy3848 118 HISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIG 161 (552)
Q Consensus 118 ~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVG 161 (552)
++...|+++.+ -++++++++-
T Consensus 180 ----------------------~~d~vi~~l~~-~~~~~v~L~P 200 (265)
T COG4822 180 ----------------------LVDTVIEYLRK-NGIKEVHLIP 200 (265)
T ss_pred ----------------------cHHHHHHHHHH-cCCceEEEee
Confidence 33356666654 5777777653
No 259
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=20.07 E-value=3.2e+02 Score=26.71 Aligned_cols=62 Identities=11% Similarity=0.012 Sum_probs=40.6
Q ss_pred HHHHHHhCCc-eEEEEcCCCCCCCCCCCCCCCCcccccccChhhhhhccHHHHHHHHHHHcCCCcEEEEEech----hHH
Q psy3848 93 LAYLLADKGY-DVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSM----GTT 167 (552)
Q Consensus 93 la~~La~~Gy-~Via~D~RG~G~S~~~~~~sp~~~~~~~~s~~~~~~~Dl~a~I~~I~~~~g~~ki~lVGHSm----GG~ 167 (552)
.+..+...|. +|+..|..+.. .|+.+.++ +.+..+.++.+ -.++++|||- |..
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~~----------------~~~~e~~a-----~al~~~i~~~~-p~lVL~~~t~~~~~grd 125 (202)
T cd01714 68 ALREALAMGADRAILVSDRAFA----------------GADTLATA-----KALAAAIKKIG-VDLILTGKQSIDGDTGQ 125 (202)
T ss_pred HHHHHHHcCCCEEEEEeccccc----------------CCChHHHH-----HHHHHHHHHhC-CCEEEEcCCcccCCcCc
Confidence 4455566676 68888765322 23344455 45555555666 4699999998 888
Q ss_pred HHHHHHHcC
Q psy3848 168 MFYVLTSQR 176 (552)
Q Consensus 168 ial~~a~~~ 176 (552)
++-.+|++.
T Consensus 126 laprlAarL 134 (202)
T cd01714 126 VGPLLAELL 134 (202)
T ss_pred HHHHHHHHh
Confidence 888888764
Done!