RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3848
(552 letters)
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris)
[TaxId: 9615]}
Length = 377
Score = 207 bits (526), Expect = 4e-62
Identities = 131/349 (37%), Positives = 187/349 (53%), Gaps = 32/349 (9%)
Query: 1 PKIIRRHGYPAESYIVQTEDGYLLEIHRIPYGRKG-RRSGKKEVVFLQHGVFGSSADWVV 59
++I GYPAE Y V TEDGY+L I RIPYGRK G++ V FLQHG+ S+ +W+
Sbjct: 17 SQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWIS 76
Query: 60 AGPDTALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHI 119
P+ +L A++LAD GYDVWLGN+RGNT++R ++
Sbjct: 77 NLPNNSL---------------------------AFILADAGYDVWLGNSRGNTWARRNL 109
Query: 120 SYSPMDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEY 179
YSP + FW FSF EM +DLPA IDFIL KT ++ Y+GHS GTT+ ++ S P+
Sbjct: 110 YYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKL 169
Query: 180 NEKLLGAISLAPVAYLSRTRSPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIAC 239
+++ +LAPVA + T + I L + GN F H+ ++ C
Sbjct: 170 AKRIKTFYALAPVATVKYTETLINKLMLVPSFL--FKLIFGNKIFYPHHFFDQFLATEVC 227
Query: 240 ELNHMEMKRCEDFLFILCGHDPYQFKMSLLPVILGHTPAGGSTRTLVHFAQFIDSGKFRQ 299
C + LFI+CG D MS L V L H PAG S + ++H++Q + SGKF+
Sbjct: 228 -SRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQA 286
Query: 300 FDYG-KDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQVTIRL 347
FD+G +N+ Y+ + PP Y+L + +A + NDLL + L
Sbjct: 287 FDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLL 335
Score = 73.6 bits (179), Expect = 1e-14
Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 8/244 (3%)
Query: 212 IEKIMDWIGNGEF-LAHNTMLNYVTKIACELNHMEMKRCEDFLFILCGHDPYQFKMSLLP 270
I+ I+ G + ++ + IA N KR + F + + +
Sbjct: 135 IDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINK 194
Query: 271 VILGHTPA----GGSTRTLVHFAQFIDSGKFRQFDYGKDENLHIYNSTFPPKYDLKFIST 326
++L + G+ H D + +
Sbjct: 195 LMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMS 254
Query: 327 KVAFFYADNDLLTNEQVTIRLGLVDLFRKFRQFDYG-KDENLHIYNSTFPPKYDLKFIST 385
++ + + N T+ Q + KF+ FD+G +N+ Y+ + PP Y+L +
Sbjct: 255 RLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHV 314
Query: 386 KVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLL 445
+A + NDLL + DV L + LPN + K+ +NHLDF+WA D VYN+++
Sbjct: 315 PIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIP--PYNHLDFIWAMDAPQAVYNEIVS 372
Query: 446 VLKT 449
++ T
Sbjct: 373 MMGT 376
>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida
antarctica), form b [TaxId: 34362]}
Length = 317
Score = 51.3 bits (122), Expect = 1e-07
Identities = 16/133 (12%), Positives = 36/133 (27%), Gaps = 20/133 (15%)
Query: 77 GIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEM 136
G G++ L GY + + + + +
Sbjct: 39 GTGTTGPQSFDSN---WIPLSTQLGYTPCWISPPP--FMLNDTQVNTEYMV--------- 84
Query: 137 GYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLS 196
I + + + ++ + S G + + P K+ ++ AP +
Sbjct: 85 ------NAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 138
Query: 197 RTRSPIRYLAPFA 209
P+ LA A
Sbjct: 139 VLAGPLDALAVSA 151
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio
harveyi [TaxId: 669]}
Length = 302
Score = 46.1 bits (108), Expect = 5e-06
Identities = 22/247 (8%), Positives = 54/247 (21%), Gaps = 46/247 (18%)
Query: 14 YIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVT 73
++++ +G L + P K K + + G +
Sbjct: 7 HVLRVNNGQELHVWETP--PKENVPFKNNTILIASGFARRMDHFA--------------- 49
Query: 74 SDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSF 133
LA L+ G+ V+ ++ + S + +F+
Sbjct: 50 ------------------GLAEYLSTNGFHVFRYDSLHHVGLSSG--------SIDEFTM 83
Query: 134 HEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVA 193
L + L + I S+ + Y E + + +
Sbjct: 84 TTGKN-SLCT-VYHWLQTKGTQNIGLIAASLSARVAY-EVISDLELSFLITAVGVVNLRD 140
Query: 194 YLSRTRSPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCEDFL 253
L + P + + ++ L
Sbjct: 141 TLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPL 200
Query: 254 FILCGHD 260
++
Sbjct: 201 IAFTANN 207
Score = 28.7 bits (63), Expect = 1.6
Identities = 10/72 (13%), Positives = 24/72 (33%)
Query: 348 GLVDLFRKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELY 407
L K + +D H +++ + S + F A+ND +++V ++
Sbjct: 161 DLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDML 220
Query: 408 TLLPNPVGLFKV 419
+
Sbjct: 221 AHIRTGHCKLYS 232
>d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 280
Score = 42.2 bits (98), Expect = 8e-05
Identities = 26/212 (12%), Positives = 58/212 (27%), Gaps = 11/212 (5%)
Query: 77 GIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEM 136
G+ + D+ +T G V + +++ S + + + +
Sbjct: 37 GLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETF 96
Query: 137 GYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLS 196
++PA + T +G SM +L + P ++ A SL+ S
Sbjct: 97 LTREMPAWLQAN-KGVSPTGNAAVGLSMSGGSALILAAYYP---QQFPYAASLSGFLNPS 152
Query: 197 RTRSPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCEDFLFIL 256
+ P + + + N L + +++
Sbjct: 153 ESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKR-NDPMVQIPRLVANNTR-----IWVY 206
Query: 257 CG-HDPYQFKMSLLPVILGHTPAGGSTRTLVH 287
CG P +P + +T
Sbjct: 207 CGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRD 238
>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
Length = 285
Score = 40.1 bits (93), Expect = 4e-04
Identities = 14/107 (13%), Positives = 31/107 (28%), Gaps = 19/107 (17%)
Query: 77 GIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEM 136
G+ + + + L G V++ E+
Sbjct: 15 GMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQ-------------------LDTSEV 55
Query: 137 GYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKL 183
L +++ I+ + ++ IGHS G + + RP+
Sbjct: 56 RGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASA 102
>d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId:
42739]}
Length = 319
Score = 39.4 bits (91), Expect = 7e-04
Identities = 21/149 (14%), Positives = 40/149 (26%), Gaps = 25/149 (16%)
Query: 79 GSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGY 138
G+ V + L G V++ N G + L
Sbjct: 19 GTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSD-DGPNGRGEQLL----------- 66
Query: 139 FDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLA------PV 192
A + +L T T++ IGHS G + + P+ + ++
Sbjct: 67 ----AYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASV---TTIGTPHRGSEF 119
Query: 193 AYLSRTRSPIRYLAPFALNIEKIMDWIGN 221
A + + I ++ G
Sbjct: 120 ADFVQDVLKTDPTGLSSTVIAAFVNVFGT 148
>d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 288
Score = 38.4 bits (88), Expect = 0.002
Identities = 22/212 (10%), Positives = 58/212 (27%), Gaps = 11/212 (5%)
Query: 77 GIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEM 136
G+ + D+ +T G V + +++ + + +
Sbjct: 42 GLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETF 101
Query: 137 GYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLS 196
+LP + + T +G SM + L + ++ + A +++ + S
Sbjct: 102 LTSELPGWLQANRHV-KPTGSAVVGLSMAASSALTLAIY---HPQQFVYAGAMSGLLDPS 157
Query: 197 RTRSPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCEDFLFIL 256
+ P + + + + + +L + +++
Sbjct: 158 QAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVG-KLIANNTR-----VWVY 211
Query: 257 CG-HDPYQFKMSLLPVILGHTPAGGSTRTLVH 287
CG P + LP S
Sbjct: 212 CGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQD 243
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 33.5 bits (75), Expect = 0.067
Identities = 26/165 (15%), Positives = 47/165 (28%), Gaps = 7/165 (4%)
Query: 92 ALAYLLADKGYDVWLGNAR----GNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDF 147
A A LL D G +V + AR G TY+ + +DL + L E+
Sbjct: 13 AAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGL 72
Query: 148 ILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSRTRSPIRYLAP 207
K + + + Y P + + I AP
Sbjct: 73 ETYKVNEVERLIHHVKG---KSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAP 129
Query: 208 FALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCEDF 252
+ + + D + E L ++A ++ +
Sbjct: 130 WKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHE 174
>d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens
[TaxId: 615]}
Length = 313
Score = 32.6 bits (72), Expect = 0.10
Identities = 23/120 (19%), Positives = 36/120 (30%), Gaps = 7/120 (5%)
Query: 10 PAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKA 69
+S + T DG HRI + G +GK VF+ HG G
Sbjct: 10 AYDSGWLDTGDG-----HRIYWELSGNPNGKP-AVFI-HGGPGGGISPHHRQLFDPERYK 62
Query: 70 TYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFW 129
+ +G G S +T + + G + + S S + A
Sbjct: 63 VLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQT 122
>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp.
[TaxId: 1831]}
Length = 291
Score = 32.1 bits (71), Expect = 0.15
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 8/50 (16%)
Query: 8 GYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADW 57
G+P + + V+ R+ Y G R G V HG SS W
Sbjct: 4 GFPFDPHYVEVLG------ERMHYVDVGPRDG--TPVLFLHGNPTSSYLW 45
>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 274
Score = 31.0 bits (68), Expect = 0.34
Identities = 32/261 (12%), Positives = 50/261 (19%), Gaps = 43/261 (16%)
Query: 15 IVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTS 74
I T DG I Y + G+ V HG + W
Sbjct: 2 ICTTRDG-----VEIFY----KDWGQGRPVVFIHGWPLNGDAW----------------- 35
Query: 75 DKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFH 134
+ D GY + RG+ +S D D +
Sbjct: 36 ----------------QDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDL 79
Query: 135 EMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAY 194
+ H G VL S P K P
Sbjct: 80 LTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEV 139
Query: 195 LSRTRSPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCEDFLF 254
++ + + + T N +
Sbjct: 140 FDALKNGV-LTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDA 198
Query: 255 ILCGHDPYQFKMSLLPVILGH 275
K +P ++ H
Sbjct: 199 FGYTDFTEDLKKFDIPTLVVH 219
>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas
campestris, pv. citri [TaxId: 339]}
Length = 313
Score = 30.9 bits (68), Expect = 0.41
Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Query: 10 PAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKA 69
P + ++ +D H + + + G GK VV L HG G + +
Sbjct: 10 PYQQGSLKVDDR-----HTLYFEQCGNPHGKP-VVML-HGGPGGGCNDKMRRFHDPAKYR 62
Query: 70 TYVTSDKGIGSSADW 84
+ +G G S
Sbjct: 63 IVLFDQRGSGRSTPH 77
>d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 242
Score = 30.2 bits (66), Expect = 0.53
Identities = 27/230 (11%), Positives = 54/230 (23%), Gaps = 49/230 (21%)
Query: 30 PYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVVAGP 89
P+ + G++ V+ L HG G+SAD
Sbjct: 4 PFFFEA---GERAVLLL-HGFTGNSADV-------------------------------- 27
Query: 90 DTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFIL 149
L L KGY +G+ ++ L
Sbjct: 28 -RMLGRFLESKGYTCHAPIYKGH-----------GVPPEELVHTGPDDWWQDVMNGYEFL 75
Query: 150 NKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSRTRSPIRYLAPFA 209
+ ++ G S+G L P + A + + + + Y +
Sbjct: 76 KNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCA-PMYIKSEETMYEGVLEYAREYK 134
Query: 210 LNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCEDFLFILCGH 259
K + I T + + + + + +
Sbjct: 135 KREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQ 184
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline
dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Length = 184
Score = 29.9 bits (66), Expect = 0.54
Identities = 13/79 (16%), Positives = 19/79 (24%), Gaps = 5/79 (6%)
Query: 91 TALAYLLADKGYDVWLGNARGNTY-----SRSHISYSPMDLAFWDFSFHEMGYFDLPAEI 145
A A LA KG V + + I+ P +
Sbjct: 14 HAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDA 73
Query: 146 DFILNKTDHTQMIYIGHSM 164
D IL I ++
Sbjct: 74 DVILIVVPAIHHASIAANI 92
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 29.5 bits (65), Expect = 0.64
Identities = 12/98 (12%), Positives = 23/98 (23%), Gaps = 2/98 (2%)
Query: 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILN 150
L +G++V R S F + F +++ +
Sbjct: 13 QLWLTALCKQGHEVQGW-LRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTL 71
Query: 151 KTDHT-QMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAI 187
K + S +L + L I
Sbjct: 72 KAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNI 109
>d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 322
Score = 29.5 bits (64), Expect = 1.2
Identities = 12/52 (23%), Positives = 15/52 (28%), Gaps = 15/52 (28%)
Query: 6 RHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADW 57
HGY V + R+ + G V L HG S W
Sbjct: 12 SHGY------VTVKPR-----VRLHF----VELGSGPAVCLCHGFPESWYSW 48
>d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 208
Score = 28.9 bits (63), Expect = 1.2
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 16 VQTEDGYL-LEIHRIPYGRKGRRSGK-KEVVFLQHGVFGSSADWVVAGPDTALGKATY 71
V+ +G + ++ + + SG+ + V L HG+ SS W G L +A Y
Sbjct: 4 VEQREGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGY 61
>d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase
{Xanthomonas citri [TaxId: 346]}
Length = 381
Score = 29.3 bits (64), Expect = 1.2
Identities = 16/130 (12%), Positives = 33/130 (25%), Gaps = 4/130 (3%)
Query: 92 ALAYLLADKGYDVWLGNARGNTYSRSH-ISYSPMDLAFWDFSFHEMGYFDLPAEIDFILN 150
A + + GY + RG S + P+ +
Sbjct: 79 AGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNV 138
Query: 151 KTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSRTRSPIRYLAPFAL 210
+ ++ IG S + + L A+ +P+ Y A +
Sbjct: 139 SESNGKVGMIGSSYEGFTVVMALTNPHPA---LKVAVPESPMIDGWMGDDWFNYGAFRQV 195
Query: 211 NIEKIMDWIG 220
N + +
Sbjct: 196 NFDYFTGQLS 205
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 29.0 bits (64), Expect = 1.5
Identities = 12/77 (15%), Positives = 20/77 (25%), Gaps = 4/77 (5%)
Query: 92 ALAYLLADKGYDVWLGNAR----GNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDF 147
A L V + R GN Y+ F ++ +D ++
Sbjct: 15 VCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHTNDKYIWDYVNDLVE 74
Query: 148 ILNKTDHTQMIYIGHSM 164
T+ IY
Sbjct: 75 FNRFTNSPLAIYKDKLF 91
>d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 290
Score = 28.7 bits (62), Expect = 1.9
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 17 QTEDGYL-LEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADW 57
+ + Y + I Y K +++ + HG G S D+
Sbjct: 1 ECIENYAKVNGIYIYYKLCKAPEEKAKLMTM-HGGPGMSHDY 41
>d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas
paucimobilis, UT26, LinB [TaxId: 13689]}
Length = 298
Score = 28.7 bits (62), Expect = 2.1
Identities = 35/270 (12%), Positives = 60/270 (22%), Gaps = 17/270 (6%)
Query: 27 HRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVV 86
R+ Y G + + QHG SS W P + + IG +
Sbjct: 18 RRMAY----IDEGTGDPILFQHGNPTSSYLWRNIMP--HCAGLGRLIACDLIGMGDSDKL 71
Query: 87 AGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEID 146
+ Y L A + + +D++ A ++
Sbjct: 72 DPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYME 131
Query: 147 FILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSRTRSPIRYLA 206
I + + + + + + + Y
Sbjct: 132 AIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYRE 191
Query: 207 PFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCEDFLFILCGHDPYQFKM 266
PF E + + V IA + + LFI
Sbjct: 192 PFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGR 251
Query: 267 -----SLLPVILGHTPAGGSTRTLVHFAQF 291
P T AG HF Q
Sbjct: 252 MRDFCRTWPNQTEITVAGA------HFIQE 275
>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans
[TaxId: 1916]}
Length = 275
Score = 28.4 bits (61), Expect = 2.1
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 7/42 (16%)
Query: 16 VQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADW 57
V T DG I Y G R G V HG S+ DW
Sbjct: 3 VTTSDG-----TNIFYKDWGPRDG--LPVVFHHGWPLSADDW 37
>d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter
autotrophicus [TaxId: 280]}
Length = 310
Score = 28.4 bits (61), Expect = 2.4
Identities = 11/50 (22%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Query: 8 GYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADW 57
YP + GY R Y +G + + L HG S +
Sbjct: 17 QYPFSPNYLDDLPGY--PGLRAHYLDEGNSDAEDVFLCL-HGEPTWSYLY 63
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI,
C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Length = 218
Score = 28.0 bits (61), Expect = 2.5
Identities = 18/111 (16%), Positives = 30/111 (27%), Gaps = 4/111 (3%)
Query: 78 IGSSADWVVA---GPD-TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSF 133
+G +V G D AYL +G V + ++ +DLA +
Sbjct: 1 VGVGGKVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFHSPPFTSERAKQKVIDLAQELTKY 60
Query: 134 HEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLL 184
+ L + Y M M + E N +
Sbjct: 61 CKRVTLHLVPFTEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNALAI 111
>d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 203
Score = 27.8 bits (60), Expect = 2.6
Identities = 23/160 (14%), Positives = 37/160 (23%), Gaps = 43/160 (26%)
Query: 18 TEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKG 77
T+D Y H+ G G + L HG G + G
Sbjct: 2 TKDSY---FHKSRAGVAGA-----PLFVLLHGTGGDENQFFDFGA--------------- 38
Query: 78 IGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMG 137
LL +G+ + +R D
Sbjct: 39 -----------------RLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGK 81
Query: 138 YFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRP 177
D I +I +G S G + + ++P
Sbjct: 82 MADF---IKANREHYQAGPVIGLGFSNGANILANVLIEQP 118
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 180
Score = 27.7 bits (60), Expect = 3.0
Identities = 11/80 (13%), Positives = 21/80 (26%)
Query: 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILN 150
+AL+ L D G +V + +T IS ++ E
Sbjct: 13 SALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENA 72
Query: 151 KTDHTQMIYIGHSMGTTMFY 170
+ + G +
Sbjct: 73 EVVLLGVSTDGVLPVMSRIL 92
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 277
Score = 27.6 bits (59), Expect = 3.7
Identities = 31/257 (12%), Positives = 55/257 (21%), Gaps = 45/257 (17%)
Query: 16 VQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSD 75
V E+ ++++ Y G + V L HG S W
Sbjct: 5 VGQENSTSIDLY---Y----EDHGTGQPVVLIHGFPLSGHSW------------------ 39
Query: 76 KGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHE 135
+ L D GY V + RG S + D D +
Sbjct: 40 ---------------ERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVL 84
Query: 136 MGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYL 195
A + T + + + K A
Sbjct: 85 ETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEF 144
Query: 196 SRTRSPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCEDFLFI 255
+A + N + + +++ A + F
Sbjct: 145 FD-----GIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAA 199
Query: 256 LCGHDPYQFKMSLLPVI 272
Y + +P I
Sbjct: 200 AAPTTWYTDFRADIPRI 216
>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC
{Streptomyces purpurascens [TaxId: 1924]}
Length = 297
Score = 27.6 bits (59), Expect = 3.8
Identities = 13/144 (9%), Positives = 27/144 (18%), Gaps = 34/144 (23%)
Query: 27 HRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGIGSSADWVV 86
+ G + + L G S+ W
Sbjct: 10 VELWSDDFGDPAD--PALLLVMGGNLSALGW----------------------------- 38
Query: 87 AGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEID 146
A LAD G V + R S + + + +
Sbjct: 39 ---PDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRA 95
Query: 147 FILNKTDHTQMIYIGHSMGTTMFY 170
++ + + +
Sbjct: 96 HVVGLSMGATITQVIALDHHDRLS 119
>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp.
[TaxId: 51671]}
Length = 279
Score = 27.2 bits (58), Expect = 4.8
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 7/42 (16%)
Query: 16 VQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADW 57
V E+ +E++ Y G + V L HG W
Sbjct: 5 VGNENSTPIELY---Y----EDQGSGQPVVLIHGYPLDGHSW 39
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium
radiobacter [TaxId: 358]}
Length = 293
Score = 27.2 bits (58), Expect = 5.4
Identities = 35/260 (13%), Positives = 57/260 (21%), Gaps = 15/260 (5%)
Query: 4 IRRHGYPAESYIVQTEDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPD 63
IRR + Y VQ D +I Y R G + L HG G +W
Sbjct: 2 IRRP-EDFKHYEVQLPD------VKIHY----VREGAGPTLLLLHGWPGFWWEWSKVIGP 50
Query: 64 TALGKATYVTSDKGIGSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSP 123
A V +G G S + AD + Y H +
Sbjct: 51 LAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAI 110
Query: 124 MDLAFWDFSFHEMGYFDLPAEIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKL 183
+ F + + D I + E
Sbjct: 111 VLHKFIRKYSDRVIKAAI---FDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSS 167
Query: 184 LGAISLAPVAYLSRTRSPIRYLAPFALNIEKIMDWIGNGEFLAHNTMLNYVTKIACELNH 243
+ L L + + N + A
Sbjct: 168 REVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTD 227
Query: 244 MEMKRCEDFLFILCG-HDPY 262
++ + + ++ G D
Sbjct: 228 LDHTMSDLPVTMIWGLGDTC 247
>d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374
{Mesorhizobium loti [TaxId: 381]}
Length = 209
Score = 26.9 bits (58), Expect = 5.5
Identities = 22/162 (13%), Positives = 38/162 (23%), Gaps = 37/162 (22%)
Query: 19 EDGYLLEIHRIPYGRKGRRSGKKEVVFLQHGVFGSSADWVVAGPDTALGKATYVTSDKGI 78
E+ LL PY G +E +FL HG V
Sbjct: 1 ENSPLLTDLAFPYRLLGAGKESRECLFLLHGSGVDETTLV-------------------- 40
Query: 79 GSSADWVVAGPDTALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGY 138
LA + + R + +D ++
Sbjct: 41 -------------PLARRI-APTATLVAARGR-IPQEDGFRWFERIDPTRFEQKSILAET 85
Query: 139 FDLPAEIDFILNK--TDHTQMIYIGHSMGTTMFYVLTSQRPE 178
A + + + ++G+S G + L P
Sbjct: 86 AAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPG 127
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 27.0 bits (58), Expect = 6.9
Identities = 24/180 (13%), Positives = 42/180 (23%), Gaps = 9/180 (5%)
Query: 92 ALAYLLADKGYDVWL--------GNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPA 143
+ AY+LA G+ V + G R + + + + Y
Sbjct: 44 SAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFD 103
Query: 144 EIDFILNKTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAPVAYLSRTRSPIR 203
++ + +I + +Y K A A Y +
Sbjct: 104 LRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVE 163
Query: 204 YLAPFALN-IEKIMDWIGNGEFLAHNTMLNYVTKIACELNHMEMKRCEDFLFILCGHDPY 262
L + I D E+L L+ E HD
Sbjct: 164 ELKRTNCSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDI 223
>d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio
cholerae [TaxId: 666]}
Length = 264
Score = 26.8 bits (57), Expect = 7.0
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 27 HRIPYGRKGRRSGKKEVVFLQHGVFGSSADW 57
+++ + + + +V L HG+ GS ADW
Sbjct: 5 NQLHFAKPT---ARTPLVVLVHGLLGSGADW 32
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice
blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 182
Score = 26.5 bits (57), Expect = 7.3
Identities = 16/130 (12%), Positives = 34/130 (26%), Gaps = 3/130 (2%)
Query: 91 TALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEMGYFDLPAEIDFILN 150
+L D G V + + + D + ++ I
Sbjct: 15 RPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISL 74
Query: 151 KTDHTQMIYIGHSMGTTMFYVLTSQRPEYNEKLLGAISLAP---VAYLSRTRSPIRYLAP 207
I ++ V TS +L A A + + + P
Sbjct: 75 IPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGYSAMAKLVGVP 134
Query: 208 FALNIEKIMD 217
A+ ++ ++D
Sbjct: 135 CAVAVKFVLD 144
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC
{Thermotoga maritima [TaxId: 2336]}
Length = 89
Score = 25.2 bits (55), Expect = 7.4
Identities = 9/45 (20%), Positives = 14/45 (31%), Gaps = 5/45 (11%)
Query: 92 ALAYLLADKGYDVWLGNARGNTYSRSHISYSPMDLAFWDFSFHEM 136
A+A G DV+ G+ + + L F H
Sbjct: 16 AVALHEFSNGNDVY-----GSNIEETERTAYLRKLGIPIFVPHSA 55
>d2zjrs1 b.53.1.1 (S:1-175) Ribosomal protein TL5 (general stress
protein CTC) {Deinococcus radiodurans [TaxId: 1299]}
Length = 175
Score = 26.2 bits (57), Expect = 9.1
Identities = 13/109 (11%), Positives = 28/109 (25%), Gaps = 10/109 (9%)
Query: 361 YGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVN 420
Y K+ N+ + + + L + E + L V
Sbjct: 24 YNKENNVSFAL----DRKAFDRAFRQQST----TGLFDITVEGGETFPALVKAV-QMDKR 74
Query: 421 FTYFNHLDFLW-AKDVKALVYNDLLLVLKTFSKTRARSEVLTVTNVIPQ 468
H+DF V + ++ + + + V N+
Sbjct: 75 KRAPIHVDFYMVTYGEPVEVSVPVHTTGRSQGEVQGGLVDIVVHNLQIV 123
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.424
Gapped
Lambda K H
0.267 0.0504 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,115,781
Number of extensions: 100554
Number of successful extensions: 334
Number of sequences better than 10.0: 1
Number of HSP's gapped: 327
Number of HSP's successfully gapped: 62
Length of query: 552
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 462
Effective length of database: 1,171,896
Effective search space: 541415952
Effective search space used: 541415952
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.5 bits)