Query psy3850
Match_columns 215
No_of_seqs 186 out of 881
Neff 4.6
Searched_HMMs 46136
Date Fri Aug 16 19:04:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3850.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3850hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2624|consensus 100.0 7.4E-34 1.6E-38 265.3 9.3 114 2-115 287-400 (403)
2 PLN02872 triacylglycerol lipas 100.0 1E-29 2.2E-34 235.7 10.2 112 2-115 278-391 (395)
3 TIGR01836 PHA_synth_III_C poly 98.0 9.1E-06 2E-10 73.0 6.1 70 41-112 280-349 (350)
4 PRK07868 acyl-CoA synthetase; 97.7 0.00013 2.8E-09 74.9 8.7 77 42-120 292-368 (994)
5 PF00561 Abhydrolase_1: alpha/ 97.6 3E-05 6.6E-10 62.1 1.8 69 29-100 157-225 (230)
6 PHA02857 monoglyceride lipase; 97.2 0.001 2.2E-08 56.5 6.8 70 42-113 204-273 (276)
7 TIGR01738 bioH putative pimelo 97.2 0.0011 2.3E-08 52.9 6.1 62 42-109 183-244 (245)
8 TIGR02240 PHA_depoly_arom poly 97.1 0.0014 3E-08 56.1 6.9 68 43-117 203-270 (276)
9 PLN02385 hydrolase; alpha/beta 97.0 0.0019 4.1E-08 57.9 7.1 72 42-114 274-346 (349)
10 PLN02298 hydrolase, alpha/beta 97.0 0.0018 3.9E-08 57.1 6.8 74 42-116 246-320 (330)
11 PF00326 Peptidase_S9: Prolyl 96.9 0.0016 3.5E-08 53.9 5.5 75 39-115 134-211 (213)
12 TIGR02427 protocat_pcaD 3-oxoa 96.9 0.0031 6.6E-08 50.2 6.2 63 42-110 188-250 (251)
13 TIGR03611 RutD pyrimidine util 96.9 0.0034 7.3E-08 50.8 6.4 64 42-111 193-256 (257)
14 PRK10749 lysophospholipase L2; 96.7 0.0029 6.3E-08 56.5 5.8 72 42-113 254-329 (330)
15 PRK07581 hypothetical protein; 96.6 0.0063 1.4E-07 54.0 7.0 66 42-113 270-336 (339)
16 TIGR01392 homoserO_Ac_trn homo 96.6 0.0038 8.3E-08 56.1 5.3 65 43-110 284-350 (351)
17 PRK00870 haloalkane dehalogena 96.5 0.0046 9.9E-08 53.8 5.5 66 43-112 235-300 (302)
18 TIGR03343 biphenyl_bphD 2-hydr 96.5 0.0067 1.4E-07 51.2 6.3 64 42-111 218-281 (282)
19 TIGR03056 bchO_mg_che_rel puta 96.5 0.0092 2E-07 49.6 6.6 63 42-110 215-277 (278)
20 PLN02652 hydrolase; alpha/beta 96.4 0.0087 1.9E-07 56.0 7.1 69 42-113 319-387 (395)
21 PLN02824 hydrolase, alpha/beta 96.4 0.0079 1.7E-07 51.8 6.3 66 41-112 228-293 (294)
22 TIGR01250 pro_imino_pep_2 prol 96.3 0.011 2.5E-07 48.2 6.2 62 42-110 226-287 (288)
23 PLN02965 Probable pheophorbida 96.2 0.017 3.7E-07 49.0 7.1 66 42-113 188-253 (255)
24 PRK00175 metX homoserine O-ace 96.1 0.012 2.7E-07 53.8 6.2 69 43-114 305-375 (379)
25 TIGR01849 PHB_depoly_PhaZ poly 96.1 0.0081 1.8E-07 57.2 5.1 72 40-112 330-405 (406)
26 PF01738 DLH: Dienelactone hyd 96.1 0.012 2.6E-07 49.1 5.3 83 30-113 126-217 (218)
27 PRK08775 homoserine O-acetyltr 96.1 0.017 3.8E-07 51.7 6.6 67 42-114 272-340 (343)
28 PRK10349 carboxylesterase BioH 95.9 0.021 4.5E-07 48.0 6.3 62 42-109 191-252 (256)
29 PLN03087 BODYGUARD 1 domain co 95.9 0.018 4E-07 55.7 6.5 62 45-111 416-477 (481)
30 PRK06765 homoserine O-acetyltr 95.9 0.02 4.4E-07 53.6 6.4 68 42-112 318-387 (389)
31 PF12697 Abhydrolase_6: Alpha/ 95.9 0.013 2.8E-07 45.6 4.4 50 41-93 170-219 (228)
32 PRK10985 putative hydrolase; P 95.8 0.026 5.6E-07 50.4 6.7 72 40-114 248-321 (324)
33 PRK06489 hypothetical protein; 95.7 0.031 6.7E-07 50.5 6.7 67 42-115 287-359 (360)
34 PLN02679 hydrolase, alpha/beta 95.6 0.032 6.9E-07 50.7 6.6 65 43-113 288-357 (360)
35 PLN02578 hydrolase 95.4 0.049 1.1E-06 49.2 7.0 62 43-111 292-353 (354)
36 PRK03592 haloalkane dehalogena 95.3 0.037 8E-07 47.7 5.7 66 43-114 224-290 (295)
37 PRK10673 acyl-CoA esterase; Pr 95.2 0.073 1.6E-06 44.1 7.0 64 43-112 191-254 (255)
38 TIGR01249 pro_imino_pep_1 prol 94.9 0.078 1.7E-06 46.5 6.6 63 42-113 242-305 (306)
39 COG0429 Predicted hydrolase of 94.8 0.05 1.1E-06 51.1 5.2 101 10-114 231-341 (345)
40 PLN02511 hydrolase 94.6 0.055 1.2E-06 50.1 5.1 72 40-114 291-366 (388)
41 PF12695 Abhydrolase_5: Alpha/ 94.5 0.063 1.4E-06 40.6 4.3 49 40-90 97-145 (145)
42 PF11339 DUF3141: Protein of u 94.4 0.12 2.7E-06 51.2 7.1 87 28-114 275-372 (581)
43 PRK10566 esterase; Provisional 94.1 0.13 2.9E-06 42.9 5.9 64 43-113 181-248 (249)
44 TIGR01607 PST-A Plasmodium sub 94.0 0.16 3.5E-06 45.9 6.7 66 43-111 264-331 (332)
45 KOG1455|consensus 94.0 0.11 2.4E-06 48.2 5.6 70 42-113 241-312 (313)
46 PLN02894 hydrolase, alpha/beta 94.0 0.2 4.3E-06 46.7 7.4 71 41-117 319-389 (402)
47 PRK03204 haloalkane dehalogena 93.9 0.16 3.4E-06 44.4 6.1 58 47-110 227-285 (286)
48 KOG1454|consensus 93.7 0.22 4.8E-06 45.6 7.1 65 43-113 259-324 (326)
49 COG1506 DAP2 Dipeptidyl aminop 93.7 0.14 3.1E-06 50.5 6.1 84 29-115 534-618 (620)
50 TIGR03695 menH_SHCHC 2-succiny 93.7 0.18 4E-06 39.7 5.7 62 42-110 189-250 (251)
51 COG2267 PldB Lysophospholipase 93.2 0.27 5.8E-06 44.4 6.6 74 41-115 222-296 (298)
52 COG3243 PhaC Poly(3-hydroxyalk 92.7 0.17 3.6E-06 49.1 4.7 71 40-113 323-399 (445)
53 TIGR03100 hydr1_PEP hydrolase, 92.6 0.2 4.3E-06 43.8 4.7 64 42-111 202-273 (274)
54 PRK05077 frsA fermentation/res 92.4 0.39 8.5E-06 45.2 6.8 61 44-113 352-412 (414)
55 KOG3043|consensus 91.6 0.46 9.9E-06 42.8 5.9 81 32-113 150-240 (242)
56 PRK13604 luxD acyl transferase 91.4 0.28 6.1E-06 45.3 4.6 54 41-98 196-249 (307)
57 COG1073 Hydrolases of the alph 91.1 0.52 1.1E-05 39.0 5.5 76 37-113 221-297 (299)
58 PRK14875 acetoin dehydrogenase 90.6 0.47 1E-05 41.8 5.0 62 42-112 309-370 (371)
59 PLN03084 alpha/beta hydrolase 90.3 0.88 1.9E-05 42.7 6.8 61 44-111 322-382 (383)
60 COG2021 MET2 Homoserine acetyl 90.2 0.71 1.5E-05 43.9 6.1 55 43-98 302-356 (368)
61 COG0412 Dienelactone hydrolase 89.9 0.69 1.5E-05 40.4 5.5 84 30-113 140-233 (236)
62 PLN02980 2-oxoglutarate decarb 89.7 0.83 1.8E-05 50.4 7.0 76 42-121 1563-1647(1655)
63 TIGR01838 PHA_synth_I poly(R)- 89.5 0.58 1.3E-05 46.1 5.1 53 41-96 409-461 (532)
64 PRK05855 short chain dehydroge 89.2 0.75 1.6E-05 43.0 5.5 66 43-115 229-294 (582)
65 PRK11126 2-succinyl-6-hydroxy- 86.6 2 4.3E-05 35.3 5.9 59 42-112 183-241 (242)
66 PRK05371 x-prolyl-dipeptidyl a 86.3 1.2 2.5E-05 45.7 5.2 74 40-115 448-521 (767)
67 COG0596 MhpC Predicted hydrola 86.0 3 6.6E-05 32.0 6.3 55 41-97 215-269 (282)
68 PLN02211 methyl indole-3-aceta 85.2 3.6 7.8E-05 35.9 7.1 60 45-111 208-268 (273)
69 TIGR01839 PHA_synth_II poly(R) 85.1 1.2 2.7E-05 44.3 4.6 51 40-93 434-484 (560)
70 PF08840 BAAT_C: BAAT / Acyl-C 84.8 1.1 2.3E-05 38.4 3.6 74 40-113 108-210 (213)
71 COG1647 Esterase/lipase [Gener 84.7 1.5 3.3E-05 39.5 4.6 66 42-111 176-242 (243)
72 KOG4178|consensus 83.4 3.3 7.1E-05 38.8 6.3 81 27-114 240-321 (322)
73 PF08386 Abhydrolase_4: TAP-li 82.5 5.2 0.00011 30.5 6.2 45 46-93 33-77 (103)
74 PF02230 Abhydrolase_2: Phosph 82.3 3.7 7.9E-05 34.4 5.7 59 47-112 155-214 (216)
75 PF10142 PhoPQ_related: PhoPQ- 81.1 5.9 0.00013 37.5 7.2 101 4-113 210-320 (367)
76 PRK11460 putative hydrolase; P 78.9 3 6.5E-05 35.7 4.2 63 45-114 146-209 (232)
77 PF06850 PHB_depo_C: PHB de-po 78.1 3.1 6.8E-05 36.6 4.0 99 8-113 100-202 (202)
78 KOG1838|consensus 76.4 3.1 6.8E-05 40.1 3.9 99 10-113 279-388 (409)
79 PF12740 Chlorophyllase2: Chlo 76.1 5 0.00011 36.4 4.9 68 27-96 130-211 (259)
80 PF05448 AXE1: Acetyl xylan es 74.1 4.7 0.0001 37.0 4.3 60 45-112 260-319 (320)
81 PF02273 Acyl_transf_2: Acyl t 73.0 5.4 0.00012 36.8 4.3 66 42-111 190-257 (294)
82 PF03583 LIP: Secretory lipase 72.6 5.5 0.00012 35.8 4.3 61 47-113 219-281 (290)
83 KOG2984|consensus 72.1 5.5 0.00012 36.1 4.1 61 43-112 212-275 (277)
84 COG4553 DepA Poly-beta-hydroxy 69.7 7.2 0.00016 37.0 4.4 104 8-118 305-412 (415)
85 PRK11071 esterase YqiA; Provis 66.3 18 0.00038 30.2 5.8 55 46-111 135-189 (190)
86 PF05705 DUF829: Eukaryotic pr 65.1 8.4 0.00018 32.7 3.7 47 46-92 177-224 (240)
87 KOG4667|consensus 64.4 9.7 0.00021 34.7 4.1 41 46-89 198-238 (269)
88 KOG4409|consensus 61.2 22 0.00048 34.0 6.0 66 43-113 297-364 (365)
89 KOG1552|consensus 58.6 9.3 0.0002 34.9 2.9 48 43-92 188-235 (258)
90 KOG2093|consensus 58.3 5.9 0.00013 41.8 1.8 47 167-214 901-948 (1016)
91 PF06342 DUF1057: Alpha/beta h 56.8 24 0.00051 32.9 5.3 56 43-111 208-263 (297)
92 PLN00021 chlorophyllase 56.7 16 0.00035 33.3 4.2 47 45-93 187-243 (313)
93 TIGR01840 esterase_phb esteras 55.7 11 0.00023 31.4 2.7 30 46-75 167-196 (212)
94 PLN02442 S-formylglutathione h 55.4 24 0.00053 31.1 5.0 49 42-90 212-262 (283)
95 PF03959 FSH1: Serine hydrolas 54.4 17 0.00037 30.7 3.8 35 41-75 155-189 (212)
96 PRK10162 acetyl esterase; Prov 54.0 33 0.00072 30.8 5.7 64 48-113 249-315 (318)
97 COG0400 Predicted esterase [Ge 51.2 14 0.0003 32.1 2.8 29 47-75 146-174 (207)
98 PF06821 Ser_hydrolase: Serine 50.9 17 0.00036 30.3 3.1 62 42-111 109-170 (171)
99 PRK10115 protease 2; Provision 48.0 33 0.00071 34.7 5.2 53 38-90 596-653 (686)
100 COG3208 GrsT Predicted thioest 46.4 31 0.00066 31.3 4.2 62 44-111 173-234 (244)
101 COG4188 Predicted dienelactone 42.6 13 0.00029 35.4 1.4 50 43-93 247-297 (365)
102 PF02129 Peptidase_S15: X-Pro 41.5 30 0.00065 30.0 3.4 48 42-90 223-271 (272)
103 COG3545 Predicted esterase of 38.2 2.7E+02 0.0059 24.3 8.7 100 4-109 70-175 (181)
104 PF07859 Abhydrolase_3: alpha/ 37.5 32 0.0007 27.8 2.8 40 48-89 167-207 (211)
105 KOG4391|consensus 36.3 73 0.0016 29.3 5.0 63 46-113 220-282 (300)
106 TIGR02821 fghA_ester_D S-formy 32.7 54 0.0012 28.5 3.6 52 46-97 210-263 (275)
107 PF10503 Esterase_phd: Esteras 32.3 39 0.00085 29.6 2.6 28 48-75 170-197 (220)
108 KOG2100|consensus 30.2 1.1E+02 0.0024 31.6 5.8 74 37-112 671-746 (755)
109 PF10230 DUF2305: Uncharacteri 30.0 1.2E+02 0.0025 26.9 5.3 44 47-90 221-264 (266)
110 cd07936 SCAN SCAN oligomerizat 28.3 27 0.00058 26.3 0.8 15 196-210 24-38 (85)
111 COG3458 Acetyl esterase (deace 28.1 68 0.0015 30.2 3.5 46 45-92 257-302 (321)
112 smart00431 SCAN leucine rich r 27.1 32 0.00069 27.7 1.0 15 196-210 24-38 (113)
113 PF06500 DUF1100: Alpha/beta h 27.1 71 0.0015 31.0 3.6 31 44-74 349-379 (411)
114 PF07224 Chlorophyllase: Chlor 26.0 79 0.0017 29.6 3.5 60 32-93 161-233 (307)
115 KOG2551|consensus 25.6 86 0.0019 28.3 3.6 66 41-115 157-222 (230)
116 PF08538 DUF1749: Protein of u 22.9 51 0.0011 30.7 1.7 34 43-76 228-262 (303)
117 PF09752 DUF2048: Uncharacteri 22.5 1.5E+02 0.0033 28.2 4.8 46 48-97 290-335 (348)
118 PLN02213 sinapoylglucose-malat 21.3 92 0.002 28.2 3.0 27 48-74 234-260 (319)
119 cd00167 SANT 'SWI3, ADA2, N-Co 20.9 82 0.0018 18.8 1.9 38 168-206 4-42 (45)
120 COG0657 Aes Esterase/lipase [L 20.3 2E+02 0.0043 25.2 4.9 64 43-111 242-308 (312)
121 PRK00819 RNA 2'-phosphotransfe 20.2 1.6E+02 0.0034 25.2 4.1 56 6-61 51-106 (179)
No 1
>KOG2624|consensus
Probab=100.00 E-value=7.4e-34 Score=265.30 Aligned_cols=114 Identities=37% Similarity=0.647 Sum_probs=109.1
Q ss_pred chhhhHHHHHHHHhCCCccccccCCcccccccCCccCccccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeE
Q psy3850 2 QSRYCGRFLSTSIDGRKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFK 81 (215)
Q Consensus 2 TSvK~l~H~~Q~i~Sg~Fq~YDYG~~~Nl~~YGq~tPP~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~ 81 (215)
||+||++||+|+++||+|++||||..+|+++|||.+||+|++++|++||+||||++|+|++++||+.++..++|....+.
T Consensus 287 tSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~ 366 (403)
T KOG2624|consen 287 TSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYI 366 (403)
T ss_pred ccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhccccccccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999998776666
Q ss_pred eeCCCCcccchhhcccchhHHHHHHHHHHHhccc
Q psy3850 82 VNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSK 115 (215)
Q Consensus 82 v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~~ 115 (215)
+++++|||+||+||.+|+++||++||++|++++.
T Consensus 367 ~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~~ 400 (403)
T KOG2624|consen 367 VPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFER 400 (403)
T ss_pred ccCCCccceeeeeccCcHHHHHHHHHHHHHhhhc
Confidence 7799999999999999999999999999998873
No 2
>PLN02872 triacylglycerol lipase
Probab=99.96 E-value=1e-29 Score=235.70 Aligned_cols=112 Identities=29% Similarity=0.470 Sum_probs=104.9
Q ss_pred chhhhHHHHHHHHhCCCccccccCCcccccccCCccCcccccccc--CceEEEEeeCCCccCchHhHHHHHhhCCCceee
Q psy3850 2 QSRYCGRFLSTSIDGRKFRQFDYGKDENLHIYNSTFPPKYDLKFI--STKVAFFYADNDLLTNEQDVKELYTLLPNPVGL 79 (215)
Q Consensus 2 TSvK~l~H~~Q~i~Sg~Fq~YDYG~~~Nl~~YGq~tPP~YnLsnI--tvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~ 79 (215)
||+|+++||+|++++|+||+||||..+|+++|||.+||+|||++| ++||++|||++|++++++|++++.+.|++..
T Consensus 278 tS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~-- 355 (395)
T PLN02872 278 SSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKP-- 355 (395)
T ss_pred chHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCcc--
Confidence 899999999999999999999999999999999999999999999 5899999999999999999999999999854
Q ss_pred eEeeCCCCcccchhhcccchhHHHHHHHHHHHhccc
Q psy3850 80 FKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSK 115 (215)
Q Consensus 80 ~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~~ 115 (215)
..+.+++++|+||+|+.++++.||+.|+++|+++..
T Consensus 356 ~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 356 ELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred EEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 345679999999999999999999999999986543
No 3
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.03 E-value=9.1e-06 Score=73.03 Aligned_cols=70 Identities=21% Similarity=0.192 Sum_probs=60.0
Q ss_pred ccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 41 YDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 41 YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
.++++|++|+.+++|.+|.+++++.++.+.+.+++... ..+.. ..+|.+++.+.++.+.|++.|+++|.+
T Consensus 280 ~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 280 VDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDY-TELSF-PGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred ccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCe-EEEEc-CCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 67889999999999999999999999999999986322 22223 479999999999999999999999875
No 4
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.70 E-value=0.00013 Score=74.93 Aligned_cols=77 Identities=13% Similarity=0.134 Sum_probs=67.8
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhcccCcccc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKTRARS 120 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~~~~~~s 120 (215)
+|++|++|+.+++|..|.+++++.++.+.+.+|+.. ....++..+|+.++-|..+.+.+++.|.++|++.+.....-
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~--~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~~~~~ 368 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAE--VYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGDGDKP 368 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCe--EEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccCCCCC
Confidence 589999999999999999999999999999999854 22345789999999999999999999999999987666543
No 5
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.58 E-value=3e-05 Score=62.12 Aligned_cols=69 Identities=25% Similarity=0.289 Sum_probs=58.3
Q ss_pred cccccCCccCccccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchh
Q psy3850 29 NLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKA 100 (215)
Q Consensus 29 Nl~~YGq~tPP~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~ 100 (215)
|...|....++...+++|++|+.+++|..|.+++++++..+.+.+|+.. .+.+++.+|..|+++.+...
T Consensus 157 ~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~---~~~~~~~GH~~~~~~~~~~~ 225 (230)
T PF00561_consen 157 NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQ---LVLIEGSGHFAFLEGPDEFN 225 (230)
T ss_dssp HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEE---EEEETTCCSTHHHHSHHHHH
T ss_pred ccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCE---EEECCCCChHHHhcCHHhhh
Confidence 5566777778888999999999999999999999999999999999943 34567889999999876543
No 6
>PHA02857 monoglyceride lipase; Provisional
Probab=97.21 E-value=0.001 Score=56.54 Aligned_cols=70 Identities=10% Similarity=-0.038 Sum_probs=55.5
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
.|.+|++||.+++|.+|.+++++.++.+.+.++..+ ..+.+++-+|.=..=-.+.++.|+++|+++|++.
T Consensus 204 ~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~--~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 204 IIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNR--EIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred hcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCc--eEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 577899999999999999999999999999875322 2334678888765433355888999999999874
No 7
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.16 E-value=0.0011 Score=52.85 Aligned_cols=62 Identities=24% Similarity=0.163 Sum_probs=48.2
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLV 109 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~i 109 (215)
.+.+|++||.+++|.+|.+++++..+.+.+.+|+.. .+.+++-+|.-++ +..+.+.+.|.++
T Consensus 183 ~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~---e~p~~~~~~i~~f 244 (245)
T TIGR01738 183 PLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSE---LYIFAKAAHAPFL---SHAEAFCALLVAF 244 (245)
T ss_pred HHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCe---EEEeCCCCCCccc---cCHHHHHHHHHhh
Confidence 467899999999999999999999999999999854 2346788999665 3455566655554
No 8
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.13 E-value=0.0014 Score=56.12 Aligned_cols=68 Identities=18% Similarity=0.158 Sum_probs=55.4
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhcccCc
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKTR 117 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~~~~ 117 (215)
|.+|++|+.+++|+.|.+++++..+.+.+.+|+.. ...+ +. +|+-++ +..+.+...|.+++++.+.+.
T Consensus 203 l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~-~~~i--~~-gH~~~~---e~p~~~~~~i~~fl~~~~~~~ 270 (276)
T TIGR02240 203 LHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAE-LHII--DD-GHLFLI---TRAEAVAPIIMKFLAEERQRA 270 (276)
T ss_pred hhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCE-EEEE--cC-CCchhh---ccHHHHHHHHHHHHHHhhhhc
Confidence 68999999999999999999999999999999853 2333 44 997553 566778999999998876654
No 9
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=97.04 E-value=0.0019 Score=57.91 Aligned_cols=72 Identities=18% Similarity=0.092 Sum_probs=53.8
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccc-hhHHHHHHHHHHHhcc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDV-KALVYNDLLLVLKTFS 114 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da-~~~VY~~II~iL~k~~ 114 (215)
.+.+|++|+.+++|.+|.+++++..+.+.+.+++... ..+.+++-+|.-+.=-.+. .+.|++.|+++|+++.
T Consensus 274 ~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~-~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 274 QLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDK-KLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred hcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCc-eEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 4778999999999999999999999999999854111 2334688899644322232 4558999999998764
No 10
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=97.03 E-value=0.0018 Score=57.12 Aligned_cols=74 Identities=18% Similarity=0.116 Sum_probs=55.5
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhccc-chhHHHHHHHHHHHhcccC
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKD-VKALVYNDLLLVLKTFSKT 116 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~d-a~~~VY~~II~iL~k~~~~ 116 (215)
.+.+|++|+.+++|..|.+++++.++.+++.++... ...+.+++-+|.-+.--.+ ..+.+++.|+++|.++...
T Consensus 246 ~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~-~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 246 KLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSED-KTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred hhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCC-ceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 356899999999999999999999999999886311 1233467788876544333 3567899999999887543
No 11
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=96.95 E-value=0.0016 Score=53.87 Aligned_cols=75 Identities=19% Similarity=0.153 Sum_probs=55.2
Q ss_pred ccccccc--cCceEEEEeeCCCccCchHhHHHHHhhCCC-ceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhccc
Q psy3850 39 PKYDLKF--ISTKVAFFYADNDLLTNEQDVKELYTLLPN-PVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSK 115 (215)
Q Consensus 39 P~YnLsn--ItvPV~LfyG~nD~La~p~DV~~L~~~LpN-v~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~~ 115 (215)
|..++.+ +++||.|++|.+|..+++.....|.+.|.. .+....+.+++-+| .|.- ......++.+++++|+++-+
T Consensus 134 ~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH-~~~~-~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 134 PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH-GFGN-PENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS-STTS-HHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC-CCCC-chhHHHHHHHHHHHHHHHcC
Confidence 4567788 899999999999999999999998888853 12234456788999 2222 23334688999999988743
No 12
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=96.87 E-value=0.0031 Score=50.24 Aligned_cols=63 Identities=19% Similarity=0.150 Sum_probs=48.4
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVL 110 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL 110 (215)
.+.++++||.+++|.+|.+++++.++.+.+.+++.. .+.+++-+|.-++ +..+.+.+.|.++|
T Consensus 188 ~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~---~~p~~~~~~i~~fl 250 (251)
T TIGR02427 188 RLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGAR---FAEIRGAGHIPCV---EQPEAFNAALRDFL 250 (251)
T ss_pred HhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCce---EEEECCCCCcccc---cChHHHHHHHHHHh
Confidence 467899999999999999999999999999999853 2346778997765 34555555555544
No 13
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=96.85 E-value=0.0034 Score=50.83 Aligned_cols=64 Identities=23% Similarity=0.199 Sum_probs=50.0
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
.+.+|++|+.+++|.+|.+++++..+.+.+.+++.. .+.+++-+|.-++ ...+.+.+.|.++|+
T Consensus 193 ~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~---~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 193 RLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQ---LKLLPYGGHASNV---TDPETFNRALLDFLK 256 (257)
T ss_pred HhcccCccEEEEecCcCcccCHHHHHHHHHhcCCce---EEEECCCCCCccc---cCHHHHHHHHHHHhc
Confidence 477899999999999999999999999999999853 2335778998443 344556777777764
No 14
>PRK10749 lysophospholipase L2; Provisional
Probab=96.75 E-value=0.0029 Score=56.47 Aligned_cols=72 Identities=8% Similarity=0.062 Sum_probs=54.4
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCc----eeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNP----VGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv----~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
.+.+|++|+.+++|+.|.+++++.++.+.+.+++. .....+.+++-+|.=+.=....++.|++.|+++|++.
T Consensus 254 ~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 254 GAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 35789999999999999999999989898888542 1112345788999755322234678999999999865
No 15
>PRK07581 hypothetical protein; Validated
Probab=96.62 E-value=0.0063 Score=53.97 Aligned_cols=66 Identities=20% Similarity=0.163 Sum_probs=50.8
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCC-CcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTY-FNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~-fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
.|.+|++|+.+++|..|.+++++..+.+.+.+|+.. .+.++. .+|+-++ .....+...|-++|+++
T Consensus 270 ~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~---l~~i~~~~GH~~~~---~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 270 ALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAE---LRPIESIWGHLAGF---GQNPADIAFIDAALKEL 336 (339)
T ss_pred HHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCe---EEEeCCCCCccccc---cCcHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999843 234577 7999887 33344556666666654
No 16
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=96.57 E-value=0.0038 Score=56.07 Aligned_cols=65 Identities=20% Similarity=0.063 Sum_probs=50.7
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceee-eE-eeCCCCcccchhhcccchhHHHHHHHHHH
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGL-FK-VNFTYFNHLDFLWAKDVKALVYNDLLLVL 110 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~-~~-v~~~~fnHLDFIwg~da~~~VY~~II~iL 110 (215)
|.+|++|+.+++|.+|.+++++.++.+.+.+|+.... .. .-.++.+|+-++ +..+.+.+.|.++|
T Consensus 284 l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l---e~p~~~~~~l~~FL 350 (351)
T TIGR01392 284 LSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL---VETDQVEELIRGFL 350 (351)
T ss_pred HhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh---cCHHHHHHHHHHHh
Confidence 5689999999999999999999999999999985321 11 134678998887 55666777777665
No 17
>PRK00870 haloalkane dehalogenase; Provisional
Probab=96.55 E-value=0.0046 Score=53.76 Aligned_cols=66 Identities=17% Similarity=0.170 Sum_probs=51.3
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
+.+|++|+.+++|.+|.++++.. +.+.+.+|+......+.+++-+|.-+ ....+.+++.|.++|++
T Consensus 235 l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~---~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 235 LERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQ---EDSGEELAEAVLEFIRA 300 (302)
T ss_pred hhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccch---hhChHHHHHHHHHHHhc
Confidence 57899999999999999999866 88999999743112345678899844 35567888999988865
No 18
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=96.53 E-value=0.0067 Score=51.20 Aligned_cols=64 Identities=14% Similarity=0.104 Sum_probs=50.3
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
.+.+|++|+.+++|..|.+++++..+.+.+.+|+.. .+.+++-+|.-.+ +-.+.+.+.|.++|+
T Consensus 218 ~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~---~~~i~~agH~~~~---e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 218 RLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQ---LHVFSRCGHWAQW---EHADAFNRLVIDFLR 281 (282)
T ss_pred HHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCE---EEEeCCCCcCCcc---cCHHHHHHHHHHHhh
Confidence 478899999999999999999998999999999854 2346788998543 344556777777764
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=96.46 E-value=0.0092 Score=49.57 Aligned_cols=63 Identities=17% Similarity=0.111 Sum_probs=48.5
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVL 110 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL 110 (215)
.+.+|++|+.+++|..|.+++++.++.+.+.+++.. .+.+++-+|+=+ .+..+.+.+.|.++|
T Consensus 215 ~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~---~~~~~~~gH~~~---~e~p~~~~~~i~~f~ 277 (278)
T TIGR03056 215 DLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTAT---LHVVPGGGHLVH---EEQADGVVGLILQAA 277 (278)
T ss_pred hcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCe---EEEECCCCCccc---ccCHHHHHHHHHHHh
Confidence 467799999999999999999999999999999853 234577889633 234566777777665
No 20
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=96.45 E-value=0.0087 Score=56.00 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=55.1
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
++.+|++|+.+++|.+|.+++++..+.+++.+++... ..+.+++..|.-+. ....+.+++.|+++|+..
T Consensus 319 ~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k-~l~~~~ga~H~l~~--e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 319 NFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHK-DIKLYDGFLHDLLF--EPEREEVGRDIIDWMEKR 387 (395)
T ss_pred hcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCc-eEEEECCCeEEecc--CCCHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999875321 22336788898655 456788999999999865
No 21
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=96.44 E-value=0.0079 Score=51.83 Aligned_cols=66 Identities=9% Similarity=-0.056 Sum_probs=51.1
Q ss_pred ccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 41 YDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 41 YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
..|.+|++|+.+++|.+|.+++.+..+.+.+.+++.. .+.+++-+|+-++ ...+.|.+.|.++|++
T Consensus 228 ~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~---~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 228 ELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVED---FIVLPGVGHCPQD---EAPELVNPLIESFVAR 293 (294)
T ss_pred HHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccc---eEEeCCCCCChhh---hCHHHHHHHHHHHHhc
Confidence 4578999999999999999999988888777666532 3456788997553 5566688888888764
No 22
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=96.30 E-value=0.011 Score=48.25 Aligned_cols=62 Identities=15% Similarity=0.204 Sum_probs=47.5
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVL 110 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL 110 (215)
.+.+|++|+.+++|+.|.+ ++++.+.+.+.+++.. .+.+++-+|.-++ +-.+.+.+.|.++|
T Consensus 226 ~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~---e~p~~~~~~i~~fl 287 (288)
T TIGR01250 226 KLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSR---LVVFPDGSHMTMI---EDPEVYFKLLSDFI 287 (288)
T ss_pred HhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCe---EEEeCCCCCCccc---CCHHHHHHHHHHHh
Confidence 3567999999999999985 6788888999998753 3346789997664 34666777777765
No 23
>PLN02965 Probable pheophorbidase
Probab=96.22 E-value=0.017 Score=48.96 Aligned_cols=66 Identities=12% Similarity=0.153 Sum_probs=53.2
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
.+..|++|+.+++|.+|.+++++..+.+.+.+|+.. .+.+++-+|.=++ ...+.|.+.|.+++++.
T Consensus 188 ~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~---~~~i~~~GH~~~~---e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 188 NPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQ---TYVLEDSDHSAFF---SVPTTLFQYLLQAVSSL 253 (255)
T ss_pred hhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcce---EEEecCCCCchhh---cCHHHHHHHHHHHHHHh
Confidence 455799999999999999999988899999999853 2345778998776 56666788888887654
No 24
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.13 E-value=0.012 Score=53.83 Aligned_cols=69 Identities=14% Similarity=0.037 Sum_probs=53.8
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceee-eEeeC-CCCcccchhhcccchhHHHHHHHHHHHhcc
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGL-FKVNF-TYFNHLDFLWAKDVKALVYNDLLLVLKTFS 114 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~-~~v~~-~~fnHLDFIwg~da~~~VY~~II~iL~k~~ 114 (215)
|.+|++|+.+++|.+|.+++++..+.+.+.+++.... ..+.+ ++.+|+-++ ...+.+...|.++|++..
T Consensus 305 l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l---e~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 305 LARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL---LDDPRYGRLVRAFLERAA 375 (379)
T ss_pred HhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh---cCHHHHHHHHHHHHHhhh
Confidence 5689999999999999999999999999999875210 12334 489999887 555567888888887643
No 25
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.12 E-value=0.0081 Score=57.22 Aligned_cols=72 Identities=13% Similarity=0.126 Sum_probs=60.7
Q ss_pred cccccccC-ceEEEEeeCCCccCchHhHHHHHhh---CCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 40 KYDLKFIS-TKVAFFYADNDLLTNEQDVKELYTL---LPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 40 ~YnLsnIt-vPV~LfyG~nD~La~p~DV~~L~~~---LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
.-+|++|+ +|+..+.|.+|-++++..+.-+.+. ++... +.....+.-+|+..+-|..+++.|++.|.++|.+
T Consensus 330 ~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~-k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 330 RVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDM-KRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred EecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhh-ceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 36899999 9999999999999999999877665 56532 2334456789999999999999999999999975
No 26
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=96.06 E-value=0.012 Score=49.11 Aligned_cols=83 Identities=19% Similarity=0.251 Sum_probs=49.0
Q ss_pred ccccC--CccCccccccccCceEEEEeeCCCccCchHhHHHHHhhCCC-ceeeeEeeCCCCcccchh------hcccchh
Q psy3850 30 LHIYN--STFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPN-PVGLFKVNFTYFNHLDFL------WAKDVKA 100 (215)
Q Consensus 30 l~~YG--q~tPP~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpN-v~~~~~v~~~~fnHLDFI------wg~da~~ 100 (215)
...|| ...+|.....+|++|+.+++|.+|.++++++++.+.+.|.. ........+++-.|- |. +...+.+
T Consensus 126 v~~yg~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~Hg-F~~~~~~~~~~~aa~ 204 (218)
T PF01738_consen 126 VSFYGGSPPPPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHG-FANPSRPPYDPAAAE 204 (218)
T ss_dssp EEES-SSSGGGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TT-TTSTTSTT--HHHHH
T ss_pred EEEcCCCCCCcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCccc-ccCCCCcccCHHHHH
Confidence 34677 34555567889999999999999999999999998888821 112122233444442 33 3334667
Q ss_pred HHHHHHHHHHHhc
Q psy3850 101 LVYNDLLLVLKTF 113 (215)
Q Consensus 101 ~VY~~II~iL~k~ 113 (215)
..++.++++++++
T Consensus 205 ~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 205 DAWQRTLAFFKRH 217 (218)
T ss_dssp HHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhc
Confidence 7888888888764
No 27
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.05 E-value=0.017 Score=51.69 Aligned_cols=67 Identities=21% Similarity=0.173 Sum_probs=53.6
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhC-CCceeeeEeeCC-CCcccchhhcccchhHHHHHHHHHHHhcc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLL-PNPVGLFKVNFT-YFNHLDFLWAKDVKALVYNDLLLVLKTFS 114 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~L-pNv~~~~~v~~~-~fnHLDFIwg~da~~~VY~~II~iL~k~~ 114 (215)
++.+|++|+.+++|..|.++++++++.+.+.+ |+.. .+.++ .-+|+=++ +..+.|..-|.++|++..
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~---l~~i~~~aGH~~~l---E~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGS---LRVLRSPYGHDAFL---KETDRIDAILTTALRSTG 340 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCe---EEEEeCCccHHHHh---cCHHHHHHHHHHHHHhcc
Confidence 47899999999999999999999999999988 5633 23355 48998776 677788888888887543
No 28
>PRK10349 carboxylesterase BioH; Provisional
Probab=95.95 E-value=0.021 Score=47.98 Aligned_cols=62 Identities=23% Similarity=0.189 Sum_probs=47.3
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLV 109 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~i 109 (215)
.|.+|++||.+++|.+|.+++++..+.+.+.++|.. .+.+++-+|+=++ +..+.++..|.++
T Consensus 191 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~---~~~i~~~gH~~~~---e~p~~f~~~l~~~ 252 (256)
T PRK10349 191 PLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSE---SYIFAKAAHAPFI---SHPAEFCHLLVAL 252 (256)
T ss_pred HHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCe---EEEeCCCCCCccc---cCHHHHHHHHHHH
Confidence 467899999999999999999888888889999854 2347888996554 5556566555443
No 29
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=95.92 E-value=0.018 Score=55.74 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=50.5
Q ss_pred ccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 45 FISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 45 nItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
+|++|+.+++|.+|.+++++..+.+.+.+|+.. .+.+++-+|+.++.+.- +.+...|.++.+
T Consensus 416 ~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~---l~vI~~aGH~~~v~e~p--~~fa~~L~~F~~ 477 (481)
T PLN03087 416 QLKCDVAIFHGGDDELIPVECSYAVKAKVPRAR---VKVIDDKDHITIVVGRQ--KEFARELEEIWR 477 (481)
T ss_pred hCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCE---EEEeCCCCCcchhhcCH--HHHHHHHHHHhh
Confidence 799999999999999999999999999999854 33568889999987543 556666666654
No 30
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=95.85 E-value=0.02 Score=53.60 Aligned_cols=68 Identities=15% Similarity=0.056 Sum_probs=51.2
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCce-eeeEeeCC-CCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPV-GLFKVNFT-YFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~-~~~~v~~~-~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
.|.+|++|+.+++|..|.+++++..+.+.+.+|+.. ....+.++ ..+|+-|+ ...+.+.+.|.++|++
T Consensus 318 ~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l---e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 318 ALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV---FDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh---cCHHHHHHHHHHHHcc
Confidence 477899999999999999999999999999997421 11233455 48999998 4555567777777653
No 31
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=95.85 E-value=0.013 Score=45.59 Aligned_cols=50 Identities=26% Similarity=0.274 Sum_probs=42.2
Q ss_pred ccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchh
Q psy3850 41 YDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFL 93 (215)
Q Consensus 41 YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFI 93 (215)
-.+.++++||.+++|..|.+++++.++.+.+.+++.. .+.+++-+|+-++
T Consensus 170 ~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 170 EALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAE---LVVIPGAGHFLFL 219 (228)
T ss_dssp HHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEE---EEEETTSSSTHHH
T ss_pred ccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCE---EEEECCCCCccHH
Confidence 4678899999999999999999999999999999853 3456789998554
No 32
>PRK10985 putative hydrolase; Provisional
Probab=95.84 E-value=0.026 Score=50.37 Aligned_cols=72 Identities=15% Similarity=0.038 Sum_probs=53.9
Q ss_pred cccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhccc--chhHHHHHHHHHHHhcc
Q psy3850 40 KYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKD--VKALVYNDLLLVLKTFS 114 (215)
Q Consensus 40 ~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~d--a~~~VY~~II~iL~k~~ 114 (215)
.-.|.+|++|+.+++|.+|.+++++.+..+.+..+++. .+..++-+|+.|+=|.- -..-.-+.+++++..+.
T Consensus 248 ~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 248 LPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVE---YQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred HHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeE---EEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 34578999999999999999999988888877777643 34467889999997641 23345567778776553
No 33
>PRK06489 hypothetical protein; Provisional
Probab=95.68 E-value=0.031 Score=50.51 Aligned_cols=67 Identities=16% Similarity=0.037 Sum_probs=51.6
Q ss_pred cccccCceEEEEeeCCCccCchHhH--HHHHhhCCCceeeeEeeCCC----CcccchhhcccchhHHHHHHHHHHHhccc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDV--KELYTLLPNPVGLFKVNFTY----FNHLDFLWAKDVKALVYNDLLLVLKTFSK 115 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV--~~L~~~LpNv~~~~~v~~~~----fnHLDFIwg~da~~~VY~~II~iL~k~~~ 115 (215)
.|.+|++||.+++|.+|.+++++.. +++.+.+|+.. . +.+++ .+|.-+ ...+.+.+.|.++|++..+
T Consensus 287 ~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~-l--~~i~~a~~~~GH~~~----e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 287 DLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGR-L--VLIPASPETRGHGTT----GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred HHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCe-E--EEECCCCCCCCcccc----cCHHHHHHHHHHHHHhccc
Confidence 4778999999999999999999875 78999999853 2 33455 599642 3677788888888876543
No 34
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=95.63 E-value=0.032 Score=50.71 Aligned_cols=65 Identities=25% Similarity=0.261 Sum_probs=50.0
Q ss_pred ccccCceEEEEeeCCCccCchHh-----HHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQD-----VKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~D-----V~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
+.+|++||.+++|.+|.+++++. .+.+.+.+|+.. .+.+++-+|+=+ .+..+.+.+.|.++|++.
T Consensus 288 l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~---l~~i~~aGH~~~---~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 288 IPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVT---LYVLEGVGHCPH---DDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred hhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceE---EEEcCCCCCCcc---ccCHHHHHHHHHHHHHhc
Confidence 66899999999999999998763 345777788843 334688899643 366888999999999764
No 35
>PLN02578 hydrolase
Probab=95.41 E-value=0.049 Score=49.19 Aligned_cols=62 Identities=21% Similarity=0.307 Sum_probs=48.8
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
+.+|++|+.+++|.+|.++++++.+.+.+.+|+.. .. .+ +-+|.=+ .+..+.+.+.|.++|+
T Consensus 292 l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~-l~--~i-~~GH~~~---~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 292 LSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTT-LV--NL-QAGHCPH---DEVPEQVNKALLEWLS 353 (354)
T ss_pred hhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCE-EE--Ee-CCCCCcc---ccCHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999853 22 23 3688743 4667777888887774
No 36
>PRK03592 haloalkane dehalogenase; Provisional
Probab=95.33 E-value=0.037 Score=47.70 Aligned_cols=66 Identities=9% Similarity=0.011 Sum_probs=49.5
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHH-hhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhcc
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELY-TLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFS 114 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~-~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~ 114 (215)
|.+|++|+.+++|.+|.++++.....++ ..+++.. .+.+++-+|+=++ +..+.|.+.|++++++..
T Consensus 224 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~---~~~i~~~gH~~~~---e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 224 LATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLE---ITVFGAGLHFAQE---DSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred hccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcc---eeeccCcchhhhh---cCHHHHHHHHHHHHHHhc
Confidence 6789999999999999999776665554 4566643 2335678998774 556788999999987553
No 37
>PRK10673 acyl-CoA esterase; Provisional
Probab=95.25 E-value=0.073 Score=44.06 Aligned_cols=64 Identities=13% Similarity=0.089 Sum_probs=48.8
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
+.+|++|+.+++|++|.+++++..+.+.+.+|+.. ...+++-+|.-+ .+..+.+.+.|.++|.+
T Consensus 191 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~---~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 191 IPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQAR---AHVIAGAGHWVH---AEKPDAVLRAIRRYLND 254 (255)
T ss_pred cCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcE---EEEeCCCCCeee---ccCHHHHHHHHHHHHhc
Confidence 55788999999999999999999999999999854 233678899533 23355566777777653
No 38
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=94.92 E-value=0.078 Score=46.55 Aligned_cols=63 Identities=17% Similarity=0.133 Sum_probs=47.4
Q ss_pred ccccc-CceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 42 DLKFI-STKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 42 nLsnI-tvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
.+.+| ++|+.+++|.+|.+++++..+.+.+.+++.. .+.+++-+|.-| .+.+.+.|++.++.+
T Consensus 242 ~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~---~~~~~~~gH~~~------~~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 242 NISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAE---LKVTNNAGHSAF------DPNNLAALVHALETY 305 (306)
T ss_pred hhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCE---EEEECCCCCCCC------ChHHHHHHHHHHHHh
Confidence 45667 5899999999999999999999999999743 233567889854 233456777777654
No 39
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=94.77 E-value=0.05 Score=51.07 Aligned_cols=101 Identities=22% Similarity=0.211 Sum_probs=72.6
Q ss_pred HHHHHhCCCcccccc-------CCcccccccCCccCccccccccCceEEEEeeCCCccCchHhHHHHHhhC-CCceeeeE
Q psy3850 10 LSTSIDGRKFRQFDY-------GKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLL-PNPVGLFK 81 (215)
Q Consensus 10 ~~Q~i~Sg~Fq~YDY-------G~~~Nl~~YGq~tPP~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~L-pNv~~~~~ 81 (215)
-.|+.+-.+++.||. |-..=...|-+..+ ..-|.+|.+|+.+.++.+|.+.++++|......+ |++. .
T Consensus 231 ~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs-~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~---l 306 (345)
T COG0429 231 LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASS-LPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVL---L 306 (345)
T ss_pred HHHHHhhchHHhccceeeecccCCCcHHHHHHhccc-cccccccccceEEEecCCCCCCChhhCCcchhcCCCceE---E
Confidence 556666778999994 43333344544443 5568999999999999999999999998887744 5533 2
Q ss_pred eeCCCCcccchhhcccchh--HHHHHHHHHHHhcc
Q psy3850 82 VNFTYFNHLDFLWAKDVKA--LVYNDLLLVLKTFS 114 (215)
Q Consensus 82 v~~~~fnHLDFIwg~da~~--~VY~~II~iL~k~~ 114 (215)
..-..-+|+.|+=++.... -.-+.|+++++.+.
T Consensus 307 ~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 307 QLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred EeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 2346679999998866555 45578888887764
No 40
>PLN02511 hydrolase
Probab=94.62 E-value=0.055 Score=50.06 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=53.8
Q ss_pred cccccccCceEEEEeeCCCccCchHhH-HHHHhhCCCceeeeEeeCCCCcccchhhcccch---hHHHHHHHHHHHhcc
Q psy3850 40 KYDLKFISTKVAFFYADNDLLTNEQDV-KELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVK---ALVYNDLLLVLKTFS 114 (215)
Q Consensus 40 ~YnLsnItvPV~LfyG~nD~La~p~DV-~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~---~~VY~~II~iL~k~~ 114 (215)
...|.+|++|+.+++|.+|.+++++.+ ..+...+|+.. .+..++-+|+.|+-+.+.. ..+.+.|+++|+...
T Consensus 291 ~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~---l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 291 SDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCL---LIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred hhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEE---EEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 447899999999999999999988766 44677788853 3446788999998765432 235677778887653
No 41
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=94.48 E-value=0.063 Score=40.57 Aligned_cols=49 Identities=31% Similarity=0.381 Sum_probs=38.3
Q ss_pred cccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCccc
Q psy3850 40 KYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHL 90 (215)
Q Consensus 40 ~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHL 90 (215)
.-.+..+++|+.+++|.+|.++++++++.+.+.++... ..+.++.-+|.
T Consensus 97 ~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~--~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPK--ELYIIPGAGHF 145 (145)
T ss_dssp CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSE--EEEEETTS-TT
T ss_pred hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCc--EEEEeCCCcCc
Confidence 45678899999999999999999999999999998434 33456777773
No 42
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=94.38 E-value=0.12 Score=51.21 Aligned_cols=87 Identities=16% Similarity=0.139 Sum_probs=60.3
Q ss_pred ccccccCCcc---CccccccccCceEEEEeeCCCccCchHhH-HHHHhhCCCcee-------eeEeeCCCCcccchhhcc
Q psy3850 28 ENLHIYNSTF---PPKYDLKFISTKVAFFYADNDLLTNEQDV-KELYTLLPNPVG-------LFKVNFTYFNHLDFLWAK 96 (215)
Q Consensus 28 ~Nl~~YGq~t---PP~YnLsnItvPV~LfyG~nD~La~p~DV-~~L~~~LpNv~~-------~~~v~~~~fnHLDFIwg~ 96 (215)
+|...=|+.. =-..||.+|++||++|.|..|.+++|+.+ .|+.+.-++... ....--+.-+||...-+-
T Consensus 275 gNrL~~g~~~~~~G~~~DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFVS~ 354 (581)
T PF11339_consen 275 GNRLAKGEFRVSDGRRVDLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFVSG 354 (581)
T ss_pred cchhccCceeccCCcEeehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEecc
Confidence 4554445541 13589999999999999999999999987 566555543211 122345778999966666
Q ss_pred cchhHHHHHHHHHHHhcc
Q psy3850 97 DVKALVYNDLLLVLKTFS 114 (215)
Q Consensus 97 da~~~VY~~II~iL~k~~ 114 (215)
.+.+.=+..|+..|+..+
T Consensus 355 ~VarkEH~~i~~~ld~Ie 372 (581)
T PF11339_consen 355 KVARKEHREIASNLDLIE 372 (581)
T ss_pred HhhHHHHHHHHHHHHHHh
Confidence 665556888888887554
No 43
>PRK10566 esterase; Provisional
Probab=94.13 E-value=0.13 Score=42.93 Aligned_cols=64 Identities=9% Similarity=0.021 Sum_probs=47.6
Q ss_pred cccc-CceEEEEeeCCCccCchHhHHHHHhhCCCce---eeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 43 LKFI-STKVAFFYADNDLLTNEQDVKELYTLLPNPV---GLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 43 LsnI-tvPV~LfyG~nD~La~p~DV~~L~~~LpNv~---~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
+.++ ++|+.+++|.+|.++++++.+.|.+.|+... ....+.+++-+|. | + ..++.+++++|+++
T Consensus 181 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~-~--~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 181 LEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHR-I--T----PEALDAGVAFFRQH 248 (249)
T ss_pred hhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCc-c--C----HHHHHHHHHHHHhh
Confidence 4555 6999999999999999999999999886421 1233346788896 2 2 34678899998753
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=94.04 E-value=0.16 Score=45.86 Aligned_cols=66 Identities=11% Similarity=0.165 Sum_probs=48.9
Q ss_pred cccc--CceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 43 LKFI--STKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 43 LsnI--tvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
+.+| ++|+.+++|.+|.+++++....+++.+..... ..+.++...|.-+.= .+ ++.|++.|+++|+
T Consensus 264 ~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~-~l~~~~g~~H~i~~E-~~-~~~v~~~i~~wL~ 331 (332)
T TIGR01607 264 IDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNK-ELHTLEDMDHVITIE-PG-NEEVLKKIIEWIS 331 (332)
T ss_pred HhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCc-EEEEECCCCCCCccC-CC-HHHHHHHHHHHhh
Confidence 4455 69999999999999999999999888753211 223467778877633 22 5778999999885
No 45
>KOG1455|consensus
Probab=94.00 E-value=0.11 Score=48.21 Aligned_cols=70 Identities=17% Similarity=0.233 Sum_probs=53.6
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhh--cccchhHHHHHHHHHHHhc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLW--AKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIw--g~da~~~VY~~II~iL~k~ 113 (215)
+|..|++|+.+.+|..|.++||+-.+.|++.=+...+.. .-+|..=|- .+. -....+.|+.+|+++|++.
T Consensus 241 ~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTl-KlYpGm~H~-Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 241 NLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTL-KLYPGMWHS-LLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred hcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCce-eccccHHHH-hhcCCCchhHHHHHHHHHHHHHhc
Confidence 466899999999999999999999999999876533322 335666664 334 4566778999999999863
No 46
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=93.98 E-value=0.2 Score=46.69 Aligned_cols=71 Identities=14% Similarity=0.166 Sum_probs=51.7
Q ss_pred ccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhcccCc
Q psy3850 41 YDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKTR 117 (215)
Q Consensus 41 YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~~~~ 117 (215)
..+.+|++||.+++|.+|++.+ .....+...++... ..+.+++-+|..++ +..+.+++.|+++++.+-+..
T Consensus 319 ~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~--~~~~i~~aGH~~~~---E~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 319 ESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPC--EIIRVPQGGHFVFL---DNPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred hhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCC--cEEEeCCCCCeeec---cCHHHHHHHHHHHHHHhccCC
Confidence 4478899999999999999864 56666666664323 23456888997664 355668888999998876553
No 47
>PRK03204 haloalkane dehalogenase; Provisional
Probab=93.86 E-value=0.16 Score=44.41 Aligned_cols=58 Identities=12% Similarity=0.187 Sum_probs=44.3
Q ss_pred CceEEEEeeCCCccCchHhH-HHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHH
Q psy3850 47 STKVAFFYADNDLLTNEQDV-KELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVL 110 (215)
Q Consensus 47 tvPV~LfyG~nD~La~p~DV-~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL 110 (215)
++||.+++|.+|.++.+.++ +.+.+.+|+.. .+.+++-+|.=.+ +..+.+...|.+++
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~---~~~i~~aGH~~~~---e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFPDHV---LVELPNAKHFIQE---DAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcCCCe---EEEcCCCcccccc---cCHHHHHHHHHHhc
Confidence 89999999999999877764 77889999854 2347888998443 66776777666554
No 48
>KOG1454|consensus
Probab=93.73 E-value=0.22 Score=45.62 Aligned_cols=65 Identities=25% Similarity=0.227 Sum_probs=51.9
Q ss_pred ccccC-ceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 43 LKFIS-TKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 43 LsnIt-vPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
+..|. +||.++||..|.+++.+....+.+++||.. .+.+++-+|+=-+ +..+.|.+.|..++...
T Consensus 259 ~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~---~~~I~~~gH~~h~---e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 259 IKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAE---LVEIPGAGHLPHL---ERPEEVAALLRSFIARL 324 (326)
T ss_pred hccccCCceEEEEcCcCCccCHHHHHHHHhhCCCce---EEEeCCCCccccc---CCHHHHHHHHHHHHHHh
Confidence 34555 999999999999999999999999998854 3456778888776 67777777787777643
No 49
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=93.65 E-value=0.14 Score=50.49 Aligned_cols=84 Identities=17% Similarity=0.102 Sum_probs=63.3
Q ss_pred cccccCCccCccccccccCceEEEEeeCCCccCchHhHHHHHhhCC-CceeeeEeeCCCCcccchhhcccchhHHHHHHH
Q psy3850 29 NLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLP-NPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLL 107 (215)
Q Consensus 29 Nl~~YGq~tPP~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~Lp-Nv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II 107 (215)
|...|=+.. |.+...+|++|+.|++|.+|.-|+.+..+.|...|. +.+....+.+|+-+|---- ......+|.+++
T Consensus 534 ~~~~~~~~s-p~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~~~~~~~~~~~ 610 (620)
T COG1506 534 DREKYEDRS-PIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR--PENRVKVLKEIL 610 (620)
T ss_pred ChHHHHhcC-hhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC--chhHHHHHHHHH
Confidence 444554444 467789999999999999999999999999988886 3444455667888885332 455666899999
Q ss_pred HHHHhccc
Q psy3850 108 LVLKTFSK 115 (215)
Q Consensus 108 ~iL~k~~~ 115 (215)
++++++.+
T Consensus 611 ~~~~~~~~ 618 (620)
T COG1506 611 DWFKRHLK 618 (620)
T ss_pred HHHHHHhc
Confidence 99988754
No 50
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=93.65 E-value=0.18 Score=39.70 Aligned_cols=62 Identities=26% Similarity=0.236 Sum_probs=43.4
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVL 110 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL 110 (215)
.+.+|++|+.+++|..|.++. +..+.+.+.+++.. .+.+++-+|.-++ +..+.+...|.++|
T Consensus 189 ~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~---~~~~~~~gH~~~~---e~~~~~~~~i~~~l 250 (251)
T TIGR03695 189 KLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLT---LVIIANAGHNIHL---ENPEAFAKILLAFL 250 (251)
T ss_pred HhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCc---EEEEcCCCCCcCc---cChHHHHHHHHHHh
Confidence 367899999999999998773 44566777788743 2345778996553 33456667776665
No 51
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=93.18 E-value=0.27 Score=44.38 Aligned_cols=74 Identities=14% Similarity=0.053 Sum_probs=56.4
Q ss_pred ccccccCceEEEEeeCCCccCc-hHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhccc
Q psy3850 41 YDLKFISTKVAFFYADNDLLTN-EQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSK 115 (215)
Q Consensus 41 YnLsnItvPV~LfyG~nD~La~-p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~~ 115 (215)
-+..++++||.|++|+.|.+++ .+....+++.+.... ...+.+++.-|-=|.=....++.++++|.+++.+...
T Consensus 222 ~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~-~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 222 RDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPD-KELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred hccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCC-ceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 3456789999999999999999 778877777775322 2455678899976655555558899999999987643
No 52
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=92.68 E-value=0.17 Score=49.06 Aligned_cols=71 Identities=20% Similarity=0.064 Sum_probs=57.1
Q ss_pred cccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhc--ccchhHHHH----HHHHHHHhc
Q psy3850 40 KYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWA--KDVKALVYN----DLLLVLKTF 113 (215)
Q Consensus 40 ~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg--~da~~~VY~----~II~iL~k~ 113 (215)
.-||++|+|||+.++|.+|.+++++.|-.....|+|-+ ....-.-+|+.-+.+ -+++...+. ++.+.|.+-
T Consensus 323 ~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~---~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a 399 (445)
T COG3243 323 MVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEV---TFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGA 399 (445)
T ss_pred EechhhcccceEEEeecccccCCHHHHHHHHHhcCCce---EEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhh
Confidence 47899999999999999999999999999999999832 233456899999999 666665555 666776544
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=92.57 E-value=0.2 Score=43.77 Aligned_cols=64 Identities=19% Similarity=0.156 Sum_probs=46.6
Q ss_pred cccccCceEEEEeeCCCccCchHhH------HHHHhhC--CCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDV------KELYTLL--PNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV------~~L~~~L--pNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
.|..+++|+.++||..|..++ .-. .+....+ +++. .+.+++-+| |+--.++++.|++.|.++|+
T Consensus 202 ~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~---~~~~~~~~H--~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 202 GLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGIE---RVEIDGADH--TFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCeE---EEecCCCCc--ccccHHHHHHHHHHHHHHHh
Confidence 356789999999999999863 222 3344445 5532 455788899 66678888999999999885
No 54
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=92.40 E-value=0.39 Score=45.19 Aligned_cols=61 Identities=13% Similarity=0.062 Sum_probs=45.2
Q ss_pred cccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 44 KFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 44 snItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
.+|++|+.+++|.+|.++++++.+.+.+..|+.. .. .+++--|. .....+...|+++|++.
T Consensus 352 ~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~-l~--~i~~~~~~------e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 352 RRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGK-LL--EIPFKPVY------RNFDKALQEISDWLEDR 412 (414)
T ss_pred cCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCe-EE--EccCCCcc------CCHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999998888744 22 23331111 25567788888888653
No 55
>KOG3043|consensus
Probab=91.60 E-value=0.46 Score=42.78 Aligned_cols=81 Identities=17% Similarity=0.133 Sum_probs=54.5
Q ss_pred ccCCccCccccccccCceEEEEeeCCCccCchHhHHHHHhhCCCcee-eeEeeCCCCcccchhh---------cccchhH
Q psy3850 32 IYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVG-LFKVNFTYFNHLDFLW---------AKDVKAL 101 (215)
Q Consensus 32 ~YGq~tPP~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~-~~~v~~~~fnHLDFIw---------g~da~~~ 101 (215)
.||+..- .=+..++++||.+..|++|.+++++||..+.+.|.+... .+.+..-.=.|-.|+- .+.+.++
T Consensus 150 ~hps~~d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~ee 228 (242)
T KOG3043|consen 150 FHPSFVD-SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEE 228 (242)
T ss_pred ecCCcCC-hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHH
Confidence 4555444 356788999999999999999999999776666543211 1233332233445653 2346678
Q ss_pred HHHHHHHHHHhc
Q psy3850 102 VYNDLLLVLKTF 113 (215)
Q Consensus 102 VY~~II~iL~k~ 113 (215)
.|..++.++++|
T Consensus 229 a~~~~~~Wf~~y 240 (242)
T KOG3043|consen 229 AYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHh
Confidence 889999998876
No 56
>PRK13604 luxD acyl transferase; Provisional
Probab=91.44 E-value=0.28 Score=45.28 Aligned_cols=54 Identities=15% Similarity=0.137 Sum_probs=41.1
Q ss_pred ccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccc
Q psy3850 41 YDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDV 98 (215)
Q Consensus 41 YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da 98 (215)
-.+++++.|+.+++|.+|.+++++.++.+.+.+++.. +..+.+++-+|. ++.|.
T Consensus 196 ~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~-kkl~~i~Ga~H~---l~~~~ 249 (307)
T PRK13604 196 NKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQ-CKLYSLIGSSHD---LGENL 249 (307)
T ss_pred HHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCC-cEEEEeCCCccc---cCcch
Confidence 3366788999999999999999999999999987422 234456777774 44543
No 57
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=91.12 E-value=0.52 Score=39.04 Aligned_cols=76 Identities=17% Similarity=0.125 Sum_probs=55.7
Q ss_pred cCccccccccC-ceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 37 FPPKYDLKFIS-TKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 37 tPP~YnLsnIt-vPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
..+.-++..|. .|+.+++|.+|.+++....+.+....... .......++.+|.+.-...........++.+++.+.
T Consensus 221 ~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 221 LDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER-PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred CcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC-CceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 33444566777 79999999999999999999988887762 123444677889998755555456778888887654
No 58
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=90.56 E-value=0.47 Score=41.81 Aligned_cols=62 Identities=16% Similarity=0.123 Sum_probs=42.9
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
.+.++++|+.+++|.+|.+++++..+.+.. + . ....+++-+|+-++ ...+.+.+.|.++|++
T Consensus 309 ~l~~i~~Pvlii~g~~D~~vp~~~~~~l~~---~-~--~~~~~~~~gH~~~~---e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 309 RLASLAIPVLVIWGEQDRIIPAAHAQGLPD---G-V--AVHVLPGAGHMPQM---EAAADVNRLLAEFLGK 370 (371)
T ss_pred HHhcCCCCEEEEEECCCCccCHHHHhhccC---C-C--eEEEeCCCCCChhh---hCHHHHHHHHHHHhcc
Confidence 467899999999999999998876654432 2 2 23346778997553 3345677777777753
No 59
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=90.27 E-value=0.88 Score=42.65 Aligned_cols=61 Identities=13% Similarity=0.034 Sum_probs=46.4
Q ss_pred cccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 44 KFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 44 snItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
.+|++||.+++|..|.+++++.++.+.+.+ +.. .+.+++-+|+=+. +..+.|.+.|.++|+
T Consensus 322 ~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-~a~---l~vIp~aGH~~~~---E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 322 KNWKTPITVCWGLRDRWLNYDGVEDFCKSS-QHK---LIELPMAGHHVQE---DCGEELGGIISGILS 382 (383)
T ss_pred ccCCCCEEEEeeCCCCCcCHHHHHHHHHhc-CCe---EEEECCCCCCcch---hCHHHHHHHHHHHhh
Confidence 358999999999999999998888888764 432 2346777885443 677888888887775
No 60
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=90.20 E-value=0.71 Score=43.88 Aligned_cols=55 Identities=20% Similarity=0.172 Sum_probs=46.6
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccc
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDV 98 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da 98 (215)
|++|++|+.++--..|+|-++++...+.+.|+.... +.+-...++|-.|+--...
T Consensus 302 l~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S~~GHDaFL~e~~~ 356 (368)
T COG2021 302 LARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDSPYGHDAFLVESEA 356 (368)
T ss_pred HhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecCCCCchhhhcchhh
Confidence 888999999999999999999999999999998554 4444567899999876554
No 61
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=89.94 E-value=0.69 Score=40.40 Aligned_cols=84 Identities=14% Similarity=0.122 Sum_probs=56.5
Q ss_pred ccccCCccCcccc-ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccch---------hhcccch
Q psy3850 30 LHIYNSTFPPKYD-LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDF---------LWAKDVK 99 (215)
Q Consensus 30 l~~YGq~tPP~Yn-LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDF---------Iwg~da~ 99 (215)
..-||...++.-. -.++++||.+.+|..|...+..++..+.+.|........+.+..+.+-.| .+-..+.
T Consensus 140 v~fyg~~~~~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa 219 (236)
T COG0412 140 VAFYGGLIADDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAA 219 (236)
T ss_pred EEecCCCCCCcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHH
Confidence 3467776654333 45899999999999999999999999998886531112222222332222 3445566
Q ss_pred hHHHHHHHHHHHhc
Q psy3850 100 ALVYNDLLLVLKTF 113 (215)
Q Consensus 100 ~~VY~~II~iL~k~ 113 (215)
+.-+++++++++++
T Consensus 220 ~~a~~~~~~ff~~~ 233 (236)
T COG0412 220 EDAWQRVLAFFKRL 233 (236)
T ss_pred HHHHHHHHHHHHHh
Confidence 77888898888765
No 62
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=89.73 E-value=0.83 Score=50.41 Aligned_cols=76 Identities=18% Similarity=0.201 Sum_probs=56.6
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCcee---------eeEeeCCCCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVG---------LFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~---------~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
.|.+|++|+.+++|.+|.+. ++....+.+.+++... ...+.+++-+|+=++ +..+.+++.|.++|++
T Consensus 1563 ~L~~I~~PtLlI~Ge~D~~~-~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l---E~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1563 DLKQCDTPLLLVVGEKDVKF-KQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL---ENPLPVIRALRKFLTR 1638 (1655)
T ss_pred HHhhCCCCEEEEEECCCCcc-HHHHHHHHHHccccccccccccccceEEEEECCCCCchHH---HCHHHHHHHHHHHHHh
Confidence 38899999999999999987 4556778888886310 134557889998775 5667788999999997
Q ss_pred cccCccccc
Q psy3850 113 FSKTRARSE 121 (215)
Q Consensus 113 ~~~~~~~se 121 (215)
.+....+.|
T Consensus 1639 ~~~~~~~~~ 1647 (1655)
T PLN02980 1639 LHNSSTPGE 1647 (1655)
T ss_pred ccccCCCch
Confidence 765554433
No 63
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=89.47 E-value=0.58 Score=46.12 Aligned_cols=53 Identities=17% Similarity=0.097 Sum_probs=43.0
Q ss_pred ccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcc
Q psy3850 41 YDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAK 96 (215)
Q Consensus 41 YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~ 96 (215)
-+|++|++|+.+++|..|.+++++-+..+.+.+++.. ...++.-+|+-.+-.-
T Consensus 409 ~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~---~~vL~~sGHi~~ienP 461 (532)
T TIGR01838 409 LDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPK---TFVLGESGHIAGVVNP 461 (532)
T ss_pred cchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCE---EEEECCCCCchHhhCC
Confidence 5899999999999999999999999999999999743 2345778888555433
No 64
>PRK05855 short chain dehydrogenase; Validated
Probab=89.25 E-value=0.75 Score=42.95 Aligned_cols=66 Identities=8% Similarity=0.053 Sum_probs=48.6
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhccc
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSK 115 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~~ 115 (215)
+..+++|+.+++|.+|.++++...+.+.+.+++.. .+. ++ -+|.-+. ...+.+..-|.+++.+...
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~--~~-~gH~~~~---e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLW-RRE--IK-AGHWLPM---SHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHhccccccCCcce-EEE--cc-CCCcchh---hChhHHHHHHHHHHHhccC
Confidence 45689999999999999999998888888888643 222 23 4786663 3456667778888877654
No 65
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=86.59 E-value=2 Score=35.28 Aligned_cols=59 Identities=14% Similarity=0.067 Sum_probs=39.2
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
.+.+|++|+.+++|.+|.++ ..+.+.. +. ..+.+++-+|+=+ + +..+.+.+.|.++|++
T Consensus 183 ~l~~i~~P~lii~G~~D~~~-----~~~~~~~-~~---~~~~i~~~gH~~~-~--e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 183 ALQALTFPFYYLCGERDSKF-----QALAQQL-AL---PLHVIPNAGHNAH-R--ENPAAFAASLAQILRL 241 (242)
T ss_pred HhhccCCCeEEEEeCCcchH-----HHHHHHh-cC---eEEEeCCCCCchh-h--hChHHHHHHHHHHHhh
Confidence 46789999999999999865 2333332 32 2344688999433 2 4456677777777754
No 66
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=86.30 E-value=1.2 Score=45.69 Aligned_cols=74 Identities=14% Similarity=-0.061 Sum_probs=49.5
Q ss_pred cccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhccc
Q psy3850 40 KYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSK 115 (215)
Q Consensus 40 ~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~~ 115 (215)
..++.+|++||++++|-+|+.+.++.+..+.+.|........+-+..++|...-... .....+.+++++..+-.
T Consensus 448 ~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g~H~~~~~~~--~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 448 LKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQGGHVYPNNWQ--SIDFRDTMNAWFTHKLL 521 (767)
T ss_pred hhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCCCccCCCchh--HHHHHHHHHHHHHhccc
Confidence 345778999999999999999999888888877753111112223467886432211 23456778888877743
No 67
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=86.03 E-value=3 Score=31.97 Aligned_cols=55 Identities=20% Similarity=0.178 Sum_probs=41.1
Q ss_pred ccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhccc
Q psy3850 41 YDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKD 97 (215)
Q Consensus 41 YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~d 97 (215)
..+.++++|+.+.+|..|.+.+..........+++ ....+.+++-+|...+....
T Consensus 215 ~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~ 269 (282)
T COG0596 215 AALARITVPTLIIHGEDDPVVPAELARRLAAALPN--DARLVVIPGAGHFPHLEAPE 269 (282)
T ss_pred hhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC--CceEEEeCCCCCcchhhcHH
Confidence 45677889999999999966665556677777776 22345578889998877766
No 68
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=85.22 E-value=3.6 Score=35.92 Aligned_cols=60 Identities=12% Similarity=0.226 Sum_probs=45.4
Q ss_pred cc-CceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 45 FI-STKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 45 nI-tvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
++ ++|+.+++|.+|.+++++..+.+.+.++... .+ .++ -+|.=|+ ...+.|-+-|+++..
T Consensus 208 ~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~-~~--~l~-~gH~p~l---s~P~~~~~~i~~~a~ 268 (273)
T PLN02211 208 DIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQ-VY--ELE-SDHSPFF---STPFLLFGLLIKAAA 268 (273)
T ss_pred ccCccceEEEEeCCCCCCCHHHHHHHHHhCCccE-EE--EEC-CCCCccc---cCHHHHHHHHHHHHH
Confidence 45 7899999999999999999999999998642 23 334 5898887 556666666665544
No 69
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=85.14 E-value=1.2 Score=44.34 Aligned_cols=51 Identities=20% Similarity=0.135 Sum_probs=40.7
Q ss_pred cccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchh
Q psy3850 40 KYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFL 93 (215)
Q Consensus 40 ~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFI 93 (215)
.-+|++|++|++.+.|..|.||+++.+..+...+..-+ ..-.-.-+|+.=|
T Consensus 434 ~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~---~fvl~~gGHIggi 484 (560)
T TIGR01839 434 PIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKR---RFVLSNSGHIQSI 484 (560)
T ss_pred EechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCe---EEEecCCCccccc
Confidence 37899999999999999999999999999999887622 2223456787433
No 70
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=84.85 E-value=1.1 Score=38.36 Aligned_cols=74 Identities=11% Similarity=0.262 Sum_probs=40.9
Q ss_pred cccccccCceEEEEeeCCCccCchHhHH-HHHhhCCCce---eeeEeeCCCCccc---------c----------hhhcc
Q psy3850 40 KYDLKFISTKVAFFYADNDLLTNEQDVK-ELYTLLPNPV---GLFKVNFTYFNHL---------D----------FLWAK 96 (215)
Q Consensus 40 ~YnLsnItvPV~LfyG~nD~La~p~DV~-~L~~~LpNv~---~~~~v~~~~fnHL---------D----------FIwg~ 96 (215)
..++++|++|+.|+.|..|.+-+..... .+.++|.... ....+.+++-+|+ . +.||-
T Consensus 108 ~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG 187 (213)
T PF08840_consen 108 RIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGG 187 (213)
T ss_dssp B--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B
T ss_pred cccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCC
Confidence 4689999999999999999999877764 4555554311 1122334455554 2 22332
Q ss_pred c------chhHHHHHHHHHHHhc
Q psy3850 97 D------VKALVYNDLLLVLKTF 113 (215)
Q Consensus 97 d------a~~~VY~~II~iL~k~ 113 (215)
. |.+.-+++|+++|++.
T Consensus 188 ~~~~~a~A~~dsW~~~l~Fl~~~ 210 (213)
T PF08840_consen 188 EPEAHAKAQEDSWKKILEFLRKH 210 (213)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHH
Confidence 2 5667788999998865
No 71
>COG1647 Esterase/lipase [General function prediction only]
Probab=84.72 E-value=1.5 Score=39.48 Aligned_cols=66 Identities=14% Similarity=0.106 Sum_probs=48.6
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccc-hhHHHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDV-KALVYNDLLLVLK 111 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da-~~~VY~~II~iL~ 111 (215)
+++.|.+|+.+..|.+|.+++.+....+++.+-..... ..-+.+-+| +...|. ++.|.+.|+.+|+
T Consensus 176 ~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~Ke-L~~~e~SgH---VIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 176 SLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKE-LKWLEGSGH---VITLDKERDQVEEDVITFLE 242 (243)
T ss_pred hhhhcccchhheecccCCCCCHHHHHHHHHhccCCcce-eEEEccCCc---eeecchhHHHHHHHHHHHhh
Confidence 46789999999999999999999999999888653321 122344455 444443 5678899999886
No 72
>KOG4178|consensus
Probab=83.41 E-value=3.3 Score=38.83 Aligned_cols=81 Identities=17% Similarity=0.174 Sum_probs=56.7
Q ss_pred cccccccCCccCccccccccCceEEEEeeCCCccCchHhH-HHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHH
Q psy3850 27 DENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDV-KELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYND 105 (215)
Q Consensus 27 ~~Nl~~YGq~tPP~YnLsnItvPV~LfyG~nD~La~p~DV-~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~ 105 (215)
.+|+.++-- .-.--+..|++||.++||.+|...+..-. +...+.+|+... .+-+++-+|. --.+-.+.|.+.
T Consensus 240 yrn~~r~w~--a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~--~vv~~~~gH~---vqqe~p~~v~~~ 312 (322)
T KOG4178|consen 240 YRNFRRNWE--AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTE--RVVIEGIGHF---VQQEKPQEVNQA 312 (322)
T ss_pred hHHHhhCch--hccccccccccceEEEEecCcccccchhHHHHHHHhhccccc--eEEecCCccc---ccccCHHHHHHH
Confidence 367777632 22356789999999999999999987733 345566777542 2334555663 445667789999
Q ss_pred HHHHHHhcc
Q psy3850 106 LLLVLKTFS 114 (215)
Q Consensus 106 II~iL~k~~ 114 (215)
|+++|++++
T Consensus 313 i~~f~~~~~ 321 (322)
T KOG4178|consen 313 ILGFINSFS 321 (322)
T ss_pred HHHHHHhhc
Confidence 999998864
No 73
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=82.55 E-value=5.2 Score=30.51 Aligned_cols=45 Identities=13% Similarity=0.102 Sum_probs=38.7
Q ss_pred cCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchh
Q psy3850 46 ISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFL 93 (215)
Q Consensus 46 ItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFI 93 (215)
-..||.++.|..|..++.+..+.+.+.|++.. .+..+..+|--|.
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~---lvt~~g~gHg~~~ 77 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGSR---LVTVDGAGHGVYA 77 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCce---EEEEeccCcceec
Confidence 35899999999999999999999999999843 4456778999986
No 74
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=82.34 E-value=3.7 Score=34.38 Aligned_cols=59 Identities=14% Similarity=0.081 Sum_probs=37.8
Q ss_pred CceEEEEeeCCCccCchHhHHHHHhhCCCcee-eeEeeCCCCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 47 STKVAFFYADNDLLTNEQDVKELYTLLPNPVG-LFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 47 tvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~-~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
.+||.+.+|..|.+++.+..+.+.+.|.+... .....+++-+| .......+.+.++|++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH-------~i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGH-------EISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SS-------S--HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCC-------CCCHHHHHHHHHHHhh
Confidence 48999999999999999888888877754322 23344566777 2334456677777764
No 75
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=81.05 E-value=5.9 Score=37.53 Aligned_cols=101 Identities=15% Similarity=0.094 Sum_probs=71.4
Q ss_pred hhhHHHHHHHHh-CCCccccccCCc---cccc--cc----CCccCccccccccCceEEEEeeCCCccCchHhHHHHHhhC
Q psy3850 4 RYCGRFLSTSID-GRKFRQFDYGKD---ENLH--IY----NSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLL 73 (215)
Q Consensus 4 vK~l~H~~Q~i~-Sg~Fq~YDYG~~---~Nl~--~Y----Gq~tPP~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~L 73 (215)
.+++.|..|..- .=.|+.+||-.. .++. .+ .-..|-.|- +++++|.+++.|.+|.+-.|++..-..++|
T Consensus 210 ~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~-~rL~~PK~ii~atgDeFf~pD~~~~y~d~L 288 (367)
T PF10142_consen 210 KANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYR-DRLTMPKYIINATGDEFFVPDSSNFYYDKL 288 (367)
T ss_pred HHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHH-HhcCccEEEEecCCCceeccCchHHHHhhC
Confidence 578899998887 446788888432 2221 00 113555555 677999999999999999999999999999
Q ss_pred CCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 74 PNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 74 pNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
|..+ +..-+|+-+|.--- ..+...|+.+++..
T Consensus 289 ~G~K--~lr~vPN~~H~~~~------~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 289 PGEK--YLRYVPNAGHSLIG------SDVVQSLRAFYNRI 320 (367)
T ss_pred CCCe--eEEeCCCCCcccch------HHHHHHHHHHHHHH
Confidence 9744 55567999997654 33455666666554
No 76
>PRK11460 putative hydrolase; Provisional
Probab=78.90 E-value=3 Score=35.74 Aligned_cols=63 Identities=10% Similarity=-0.064 Sum_probs=43.2
Q ss_pred ccCceEEEEeeCCCccCchHhHHHHHhhCCCce-eeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhcc
Q psy3850 45 FISTKVAFFYADNDLLTNEQDVKELYTLLPNPV-GLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFS 114 (215)
Q Consensus 45 nItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~-~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~ 114 (215)
...+||.+++|.+|.+++++..+.+.+.|.... ....+.++.-+|. +. ......+.++|.+.-
T Consensus 146 ~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~---i~----~~~~~~~~~~l~~~l 209 (232)
T PRK11460 146 PTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHA---ID----PRLMQFALDRLRYTV 209 (232)
T ss_pred cCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCC---CC----HHHHHHHHHHHHHHc
Confidence 467999999999999999999999888886321 1122335777886 22 234466666666553
No 77
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=78.07 E-value=3.1 Score=36.65 Aligned_cols=99 Identities=13% Similarity=0.141 Sum_probs=72.7
Q ss_pred HHHHHHHhCCCccccccCCcccccccCCccCccccccccC-ceEEEEeeCCCccCchHhH---HHHHhhCCCceeeeEee
Q psy3850 8 RFLSTSIDGRKFRQFDYGKDENLHIYNSTFPPKYDLKFIS-TKVAFFYADNDLLTNEQDV---KELYTLLPNPVGLFKVN 83 (215)
Q Consensus 8 ~H~~Q~i~Sg~Fq~YDYG~~~Nl~~YGq~tPP~YnLsnIt-vPV~LfyG~nD~La~p~DV---~~L~~~LpNv~~~~~v~ 83 (215)
+.|.|.|+. -||.+.-- .+-+.+-|.. -+++.|+ +++.-+=|++|-++.+-.. ..|+..||..... .+-
T Consensus 100 efyL~Ti~~-VFq~~~L~-~G~~~~~Gr~----Vdp~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~-~~~ 172 (202)
T PF06850_consen 100 EFYLDTIRR-VFQEHLLP-RGTWTVRGRP----VDPAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKR-HHL 172 (202)
T ss_pred HHHHHHHHH-HHHhCccc-CCceEECCEE----cchHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhh-hcc
Confidence 456777663 57776642 2344444553 5667886 5666688999999988765 4588889874443 344
Q ss_pred CCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 84 FTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 84 ~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
.++-+|.+..-|..-++.||+.|-++|.++
T Consensus 173 ~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 173 QPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 688999999999999999999999998753
No 78
>KOG1838|consensus
Probab=76.43 E-value=3.1 Score=40.10 Aligned_cols=99 Identities=19% Similarity=0.232 Sum_probs=66.5
Q ss_pred HHHHHhCCCccccc-------cCCcccccccCCccCccccccccCceEEEEeeCCCccCchHhHHH-HHhhCCCceeeeE
Q psy3850 10 LSTSIDGRKFRQFD-------YGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKE-LYTLLPNPVGLFK 81 (215)
Q Consensus 10 ~~Q~i~Sg~Fq~YD-------YG~~~Nl~~YGq~tPP~YnLsnItvPV~LfyG~nD~La~p~DV~~-L~~~LpNv~~~~~ 81 (215)
|-++.++...+.|| ||- ++..-|=...-+.=.+.+|.+|+....+.+|.++++.++-+ .+.+-||+. .
T Consensus 279 ~d~~~~~~SvreFD~~~t~~~~gf-~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~---l 354 (409)
T KOG1838|consen 279 FDVILKSRSVREFDEALTRPMFGF-KSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVL---L 354 (409)
T ss_pred hhhhhhcCcHHHHHhhhhhhhcCC-CcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEE---E
Confidence 34555666778888 343 34544433344455689999999999999999999998855 566667754 2
Q ss_pred eeCCCCcccchhhcc--cchhHHHHH-HHHHHHhc
Q psy3850 82 VNFTYFNHLDFLWAK--DVKALVYND-LLLVLKTF 113 (215)
Q Consensus 82 v~~~~fnHLDFIwg~--da~~~VY~~-II~iL~k~ 113 (215)
+.-..=+|+.|+=|. ++.. -.++ +.+.+...
T Consensus 355 ~~T~~GGHlgfleg~~p~~~~-w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 355 VITSHGGHLGFLEGLWPSART-WMDKLLVEFLGNA 388 (409)
T ss_pred EEeCCCceeeeeccCCCccch-hHHHHHHHHHHHH
Confidence 334678999998775 3333 2344 66666544
No 79
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=76.06 E-value=5 Score=36.41 Aligned_cols=68 Identities=16% Similarity=0.178 Sum_probs=48.1
Q ss_pred cccccccCCccCccccc--ccc--CceEEEEeeCCCc--------cCchHhH--HHHHhhCCCceeeeEeeCCCCcccch
Q psy3850 27 DENLHIYNSTFPPKYDL--KFI--STKVAFFYADNDL--------LTNEQDV--KELYTLLPNPVGLFKVNFTYFNHLDF 92 (215)
Q Consensus 27 ~~Nl~~YGq~tPP~YnL--snI--tvPV~LfyG~nD~--------La~p~DV--~~L~~~LpNv~~~~~v~~~~fnHLDF 92 (215)
..++...++..|+.+.. ..+ ++|+.++=++-+. =+.|+++ +...++...-. ..+...+|+|+||
T Consensus 130 VdG~~~~~~~~P~v~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~--~~~v~~~~GH~d~ 207 (259)
T PF12740_consen 130 VDGMSKGSQTEPPVLTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPS--WHFVAKDYGHMDF 207 (259)
T ss_pred ccccccccCCCCccccCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCE--EEEEeCCCCchHh
Confidence 34555668888888765 333 4899877665553 4778887 56889887644 5677899999999
Q ss_pred hhcc
Q psy3850 93 LWAK 96 (215)
Q Consensus 93 Iwg~ 96 (215)
+=..
T Consensus 208 LDd~ 211 (259)
T PF12740_consen 208 LDDD 211 (259)
T ss_pred hcCC
Confidence 7544
No 80
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=74.06 E-value=4.7 Score=36.99 Aligned_cols=60 Identities=20% Similarity=0.155 Sum_probs=37.4
Q ss_pred ccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 45 FISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 45 nItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
+|++||++-.|-.|..|+|.-+-.+++.|+.-+ ..+..+.++|-.- ...-.++.+++|.+
T Consensus 260 ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K--~l~vyp~~~He~~------~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 260 RIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPK--ELVVYPEYGHEYG------PEFQEDKQLNFLKE 319 (320)
T ss_dssp G--SEEEEEEETT-SSS-HHHHHHHHCC--SSE--EEEEETT--SSTT------HHHHHHHHHHHHHH
T ss_pred HcCCCEEEEEecCCCCCCchhHHHHHhccCCCe--eEEeccCcCCCch------hhHHHHHHHHHHhc
Confidence 589999999999999999999999999998654 3344677777422 11114667777654
No 81
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=72.96 E-value=5.4 Score=36.80 Aligned_cols=66 Identities=20% Similarity=0.207 Sum_probs=39.3
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhccc--chhHHHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKD--VKALVYNDLLLVLK 111 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~d--a~~~VY~~II~iL~ 111 (215)
++.++.+|+++|.+..|.-+.+.+|+.+.+.+..- ....+.+++-.| | .|.| +...+|+.|-+..-
T Consensus 190 ~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~-~~klysl~Gs~H-d--L~enl~vlrnfy~svtkaai 257 (294)
T PF02273_consen 190 DMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSN-KCKLYSLPGSSH-D--LGENLVVLRNFYQSVTKAAI 257 (294)
T ss_dssp HHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT---EEEEEETT-SS----TTSSHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCC-ceeEEEecCccc-h--hhhChHHHHHHHHHHHHHHH
Confidence 46678899999999999999999999999987642 224556677777 3 2333 33445665555433
No 82
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=72.62 E-value=5.5 Score=35.76 Aligned_cols=61 Identities=18% Similarity=0.129 Sum_probs=42.7
Q ss_pred CceEEEEeeCCCccCchHhHHHHHhhCCC-c-eeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 47 STKVAFFYADNDLLTNEQDVKELYTLLPN-P-VGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 47 tvPV~LfyG~nD~La~p~DV~~L~~~LpN-v-~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
++||.+++|..|.++++.+++.+.+++-. . ........+.-+|..-+...- +..+.+|.+.
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~------~~a~~Wl~~r 281 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASA------PDALAWLDDR 281 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCc------HHHHHHHHHH
Confidence 68999999999999999999998877632 2 122445567788987543322 4566666544
No 83
>KOG2984|consensus
Probab=72.05 E-value=5.5 Score=36.06 Aligned_cols=61 Identities=15% Similarity=0.052 Sum_probs=42.9
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCc---ccchhhcccchhHHHHHHHHHHHh
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFN---HLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fn---HLDFIwg~da~~~VY~~II~iL~k 112 (215)
|.+|++|+.+++|+.|.++....|-++...++-.. .+.. +.-. ||-| .+..+..+.++|++
T Consensus 212 lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~-~~~~--peGkHn~hLry------a~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 212 LPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAK-VEIH--PEGKHNFHLRY------AKEFNKLVLDFLKS 275 (277)
T ss_pred cccccCCeeEeeCCcCCCCCCCCccchhhhcccce-EEEc--cCCCcceeeec------hHHHHHHHHHHHhc
Confidence 56899999999999999999999999888877532 2322 3333 3322 24456677777765
No 84
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=69.69 E-value=7.2 Score=37.04 Aligned_cols=104 Identities=12% Similarity=0.177 Sum_probs=76.9
Q ss_pred HHHHHHHhCCCccccccCCcccccccCCccCccccccccC-ceEEEEeeCCCccCchHh---HHHHHhhCCCceeeeEee
Q psy3850 8 RFLSTSIDGRKFRQFDYGKDENLHIYNSTFPPKYDLKFIS-TKVAFFYADNDLLTNEQD---VKELYTLLPNPVGLFKVN 83 (215)
Q Consensus 8 ~H~~Q~i~Sg~Fq~YDYG~~~Nl~~YGq~tPP~YnLsnIt-vPV~LfyG~nD~La~p~D---V~~L~~~LpNv~~~~~v~ 83 (215)
+-|.|-|.. .||+|-- +.+++.+=|... +.+.|+ +-..-+-|.+|-++-.-. ...|+..+|.....+. -
T Consensus 305 EfYLqTid~-VFqq~~L-pkG~~vhrg~~v----dp~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy-~ 377 (415)
T COG4553 305 EFYLQTIDE-VFQQHAL-PKGEMVHRGKPV----DPTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHY-M 377 (415)
T ss_pred HHHHHHHHH-HHHHhcc-cCCceeecCCcC----ChhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHh-c
Confidence 467787774 5888775 457888877754 445665 344445699999886543 3558888886554444 3
Q ss_pred CCCCcccchhhcccchhHHHHHHHHHHHhcccCcc
Q psy3850 84 FTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKTRA 118 (215)
Q Consensus 84 ~~~fnHLDFIwg~da~~~VY~~II~iL~k~~~~~~ 118 (215)
.++-+|....=|..-++.|++.|.++|.+|.+.+.
T Consensus 378 qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~~~ 412 (415)
T COG4553 378 QPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRSNR 412 (415)
T ss_pred CCCCCccceeccchHHHHHHHHHHHHHHHhCcccc
Confidence 68899999999999999999999999999977553
No 85
>PRK11071 esterase YqiA; Provisional
Probab=66.31 E-value=18 Score=30.17 Aligned_cols=55 Identities=11% Similarity=0.036 Sum_probs=39.1
Q ss_pred cCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 46 ISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 46 ItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
..+||.+++|.+|.+++++...++.+... .+.+++-+|.---+ +.+.+.|+++++
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~~------~~~~~ggdH~f~~~-----~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAACR------QTVEEGGNHAFVGF-----ERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhcc------eEEECCCCcchhhH-----HHhHHHHHHHhc
Confidence 55788999999999999999999888532 12346667765211 556777777654
No 86
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=65.11 E-value=8.4 Score=32.74 Aligned_cols=47 Identities=17% Similarity=0.122 Sum_probs=34.2
Q ss_pred cCceEEEEeeCCCccCchHhHHHHHhhCCC-ceeeeEeeCCCCcccch
Q psy3850 46 ISTKVAFFYADNDLLTNEQDVKELYTLLPN-PVGLFKVNFTYFNHLDF 92 (215)
Q Consensus 46 ItvPV~LfyG~nD~La~p~DV~~L~~~LpN-v~~~~~v~~~~fnHLDF 92 (215)
..+|-..+||.+|.+++.+||+.++++... ..........+-.|..-
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H 224 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAH 224 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhh
Confidence 348899999999999999999998776542 12223445566677765
No 87
>KOG4667|consensus
Probab=64.41 E-value=9.7 Score=34.70 Aligned_cols=41 Identities=22% Similarity=0.252 Sum_probs=33.4
Q ss_pred cCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcc
Q psy3850 46 ISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNH 89 (215)
Q Consensus 46 ItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnH 89 (215)
.+|||.-.||..|.+++.+|...+++.+||. ..+. ++.-+|
T Consensus 198 ~~C~VLTvhGs~D~IVPve~AkefAk~i~nH-~L~i--IEgADH 238 (269)
T KOG4667|consen 198 KQCRVLTVHGSEDEIVPVEDAKEFAKIIPNH-KLEI--IEGADH 238 (269)
T ss_pred ccCceEEEeccCCceeechhHHHHHHhccCC-ceEE--ecCCCc
Confidence 4599999999999999999999999999993 3333 345555
No 88
>KOG4409|consensus
Probab=61.17 E-value=22 Score=33.98 Aligned_cols=66 Identities=14% Similarity=0.188 Sum_probs=42.2
Q ss_pred ccccC--ceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 43 LKFIS--TKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 43 LsnIt--vPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
+..++ +||.++||++||+-.....+ +.++|++. ....+.+++-+|- +++.|.. ..++-|++.+++.
T Consensus 297 ~~~l~~~~pv~fiyG~~dWmD~~~g~~-~~~~~~~~-~~~~~~v~~aGHh--vylDnp~-~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 297 LRELKKDVPVTFIYGDRDWMDKNAGLE-VTKSLMKE-YVEIIIVPGAGHH--VYLDNPE-FFNQIVLEECDKV 364 (365)
T ss_pred HHhhccCCCEEEEecCcccccchhHHH-HHHHhhcc-cceEEEecCCCce--eecCCHH-HHHHHHHHHHhcc
Confidence 44444 99999999999997655443 33333432 1234567888995 5566654 4567777777653
No 89
>KOG1552|consensus
Probab=58.59 E-value=9.3 Score=34.85 Aligned_cols=48 Identities=19% Similarity=0.146 Sum_probs=36.0
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccch
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDF 92 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDF 92 (215)
+..|++||.+.+|..|.+++..-=..|.+..++-.+... +..-+|-|.
T Consensus 188 I~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~--v~g~gH~~~ 235 (258)
T KOG1552|consen 188 ISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLW--VKGAGHNDI 235 (258)
T ss_pred ceeccCCEEEEecccCceecccccHHHHHhccccCCCcE--EecCCCccc
Confidence 556789999999999999988777889999886433222 244577665
No 90
>KOG2093|consensus
Probab=58.35 E-value=5.9 Score=41.83 Aligned_cols=47 Identities=34% Similarity=0.604 Sum_probs=37.3
Q ss_pred cccchhHHHHHhhcCCCchh-HHHHhhhchhhHHHHhhcccCCCCCCCC
Q psy3850 167 TKRSDQTFMQKISAFPGDFS-RKMERKWNNSTMREMLNHWIRPEPTPVP 214 (215)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (215)
+|+|+|-.|++++|+||++. |.||.- -.-...+|++.|+.-+..|.+
T Consensus 901 ~~~s~ql~~~~ls~~~~~~~p~P~E~~-~e~~vk~l~~~w~S~~~~p~~ 948 (1016)
T KOG2093|consen 901 FKVSGQLVMEKLSALPGKVGPRPMEKP-LEHDVKELLSFWDSASASPLD 948 (1016)
T ss_pred HhhhhhHhHhHHHhcccccCCCcccch-hhhhHHHHHhhhhcccccccc
Confidence 46789999999999999986 677765 335678999999987666643
No 91
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=56.82 E-value=24 Score=32.92 Aligned_cols=56 Identities=20% Similarity=0.225 Sum_probs=39.6
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
|.+-++|+.+.||.+|.|+..+.+...+.... +..|+++ .++..+.-.++|.+-+.
T Consensus 208 ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~-----------~l~Hf~~--~~~~seee~~kI~~~f~ 263 (297)
T PF06342_consen 208 LNKKPIKVLIAYGGKDHLIEEEISFEFAMKFK-----------GLDHFNI--EKEISEEEKPKILKSFA 263 (297)
T ss_pred hccCCCcEEEEEcCcchhhHHHHHHHHHHHhC-----------Cccceee--ecCCChhHHHHHHHHHh
Confidence 33445899999999999999888887766543 3477777 66666654555555443
No 92
>PLN00021 chlorophyllase
Probab=56.75 E-value=16 Score=33.30 Aligned_cols=47 Identities=15% Similarity=0.172 Sum_probs=31.8
Q ss_pred ccCceEEEEeeCCCc--------cCchHhH--HHHHhhCCCceeeeEeeCCCCcccchh
Q psy3850 45 FISTKVAFFYADNDL--------LTNEQDV--KELYTLLPNPVGLFKVNFTYFNHLDFL 93 (215)
Q Consensus 45 nItvPV~LfyG~nD~--------La~p~DV--~~L~~~LpNv~~~~~v~~~~fnHLDFI 93 (215)
++.+|+.++.++.|. -+.|..+ ..+....+.-+ .....++++|+||+
T Consensus 187 ~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~--~~~~~~~~gH~~~~ 243 (313)
T PLN00021 187 NLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPA--VHFVAKDYGHMDML 243 (313)
T ss_pred cCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCe--eeeeecCCCcceee
Confidence 577999988888663 2334444 45777765423 45557899999994
No 93
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=55.74 E-value=11 Score=31.41 Aligned_cols=30 Identities=10% Similarity=0.101 Sum_probs=24.8
Q ss_pred cCceEEEEeeCCCccCchHhHHHHHhhCCC
Q psy3850 46 ISTKVAFFYADNDLLTNEQDVKELYTLLPN 75 (215)
Q Consensus 46 ItvPV~LfyG~nD~La~p~DV~~L~~~LpN 75 (215)
.+.|+.+++|.+|.+++++..+.+.+.|..
T Consensus 167 ~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 167 PTPIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred CCCeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 445577999999999999999888887754
No 94
>PLN02442 S-formylglutathione hydrolase
Probab=55.41 E-value=24 Score=31.05 Aligned_cols=49 Identities=10% Similarity=0.029 Sum_probs=30.3
Q ss_pred cccccCceEEEEeeCCCccCchH-hHHHHHhhCCCc-eeeeEeeCCCCccc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQ-DVKELYTLLPNP-VGLFKVNFTYFNHL 90 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~-DV~~L~~~LpNv-~~~~~v~~~~fnHL 90 (215)
.+.++++|+.+++|+.|.+++.. ..+.+.+.|... ........+.-+|-
T Consensus 212 ~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~ 262 (283)
T PLN02442 212 KFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS 262 (283)
T ss_pred hccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc
Confidence 34567899999999999998752 233444333211 11233446788885
No 95
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=54.38 E-value=17 Score=30.71 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=24.2
Q ss_pred ccccccCceEEEEeeCCCccCchHhHHHHHhhCCC
Q psy3850 41 YDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPN 75 (215)
Q Consensus 41 YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpN 75 (215)
|.-..|++|+.-++|.+|.+++++..+.|.+...+
T Consensus 155 ~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~ 189 (212)
T PF03959_consen 155 YDEPKISIPTLHVIGENDPVVPPERSEALAEMFDP 189 (212)
T ss_dssp T--TT---EEEEEEETT-SSS-HHHHHHHHHHHHH
T ss_pred hccccCCCCeEEEEeCCCCCcchHHHHHHHHhccC
Confidence 34567899999999999999999888888887765
No 96
>PRK10162 acetyl esterase; Provisional
Probab=54.04 E-value=33 Score=30.75 Aligned_cols=64 Identities=16% Similarity=0.028 Sum_probs=43.4
Q ss_pred ceEEEEeeCCCccCchHhHHHHHhhCCC-ceeeeEeeCCCCcccchhhcc--cchhHHHHHHHHHHHhc
Q psy3850 48 TKVAFFYADNDLLTNEQDVKELYTLLPN-PVGLFKVNFTYFNHLDFLWAK--DVKALVYNDLLLVLKTF 113 (215)
Q Consensus 48 vPV~LfyG~nD~La~p~DV~~L~~~LpN-v~~~~~v~~~~fnHLDFIwg~--da~~~VY~~II~iL~k~ 113 (215)
.|+++++|+.|.|.+ +.+.+.+.|.. .+....+..+.-.|-=+.++. ...+..++.|.++|++.
T Consensus 249 Pp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 249 PPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred CCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 699999999999985 66777777742 122334567888896444543 33445678888888754
No 97
>COG0400 Predicted esterase [General function prediction only]
Probab=51.16 E-value=14 Score=32.15 Aligned_cols=29 Identities=14% Similarity=0.068 Sum_probs=26.1
Q ss_pred CceEEEEeeCCCccCchHhHHHHHhhCCC
Q psy3850 47 STKVAFFYADNDLLTNEQDVKELYTLLPN 75 (215)
Q Consensus 47 tvPV~LfyG~nD~La~p~DV~~L~~~LpN 75 (215)
.+||.|.+|..|.+++......|.+.|.+
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~ 174 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTA 174 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHH
Confidence 38999999999999999999888888865
No 98
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=50.87 E-value=17 Score=30.31 Aligned_cols=62 Identities=13% Similarity=0.008 Sum_probs=40.0
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
+.....+|.+++.|+||..++.+.-+.+.+.|... .+..+.-+|+.--=|-. =++.++++|+
T Consensus 109 p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~a~----~~~~~~~GHf~~~~G~~----~~p~~~~~l~ 170 (171)
T PF06821_consen 109 PRDPLPFPSIVIASDNDPYVPFERAQRLAQRLGAE----LIILGGGGHFNAASGFG----PWPEGLDLLQ 170 (171)
T ss_dssp HCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT-E----EEEETS-TTSSGGGTHS----S-HHHHHHHH
T ss_pred cccccCCCeEEEEcCCCCccCHHHHHHHHHHcCCC----eEECCCCCCcccccCCC----chHHHHHHhc
Confidence 33455577799999999999999999999999752 34457788876433322 2345555543
No 99
>PRK10115 protease 2; Provisional
Probab=47.97 E-value=33 Score=34.73 Aligned_cols=53 Identities=9% Similarity=-0.083 Sum_probs=39.0
Q ss_pred CccccccccCce-EEEEeeCCCccCchHhHHHHHhhCCCce-e---eeEeeCCCCccc
Q psy3850 38 PPKYDLKFISTK-VAFFYADNDLLTNEQDVKELYTLLPNPV-G---LFKVNFTYFNHL 90 (215)
Q Consensus 38 PP~YnLsnItvP-V~LfyG~nD~La~p~DV~~L~~~LpNv~-~---~~~v~~~~fnHL 90 (215)
-|-.++.+++.| +.+.+|.+|.-|++..-.++...|.... . ......++-+|-
T Consensus 596 SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 596 SPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred CchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Confidence 577889999999 5566999999999999888888875321 1 111223778997
No 100
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.42 E-value=31 Score=31.30 Aligned_cols=62 Identities=10% Similarity=0.058 Sum_probs=41.9
Q ss_pred cccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHH
Q psy3850 44 KFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 44 snItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~ 111 (215)
..+.+||++|-|..|++++.+++..-.+...+... ...-+-+|+ +=....+.|-..|++.+.
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~---l~~fdGgHF---fl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFT---LRVFDGGHF---FLNQQREEVLARLEQHLA 234 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHhhcCCce---EEEecCcce---ehhhhHHHHHHHHHHHhh
Confidence 35889999999999999999999866666554332 222334664 334455556666766664
No 101
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=42.64 E-value=13 Score=35.41 Aligned_cols=50 Identities=16% Similarity=0.174 Sum_probs=39.2
Q ss_pred ccccCceEEEEeeCCCccCchHh-HHHHHhhCCCceeeeEeeCCCCcccchh
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQD-VKELYTLLPNPVGLFKVNFTYFNHLDFL 93 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~D-V~~L~~~LpNv~~~~~v~~~~fnHLDFI 93 (215)
+.+|++|+.+.-|..|..++++. .......|++.. .+...+++-.|+||+
T Consensus 247 l~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~-k~~~~vp~a~h~sfl 297 (365)
T COG4188 247 LVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGAL-KYLRLVPGATHFSFL 297 (365)
T ss_pred ceeeecceeeecccccccCCcccccccccccCCcch-hheeecCCCcccccc
Confidence 67899999999999999876654 345778888753 245668999999996
No 102
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=41.50 E-value=30 Score=29.97 Aligned_cols=48 Identities=19% Similarity=0.077 Sum_probs=30.9
Q ss_pred cccccCceEEEEeeCCCccCchHhHHHHHhhCCCce-eeeEeeCCCCccc
Q psy3850 42 DLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPV-GLFKVNFTYFNHL 90 (215)
Q Consensus 42 nLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~-~~~~v~~~~fnHL 90 (215)
.+.+|++||+++.|-.|.+.. .....+.+.|.+.. ....+-+-.|+|.
T Consensus 223 ~~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw~H~ 271 (272)
T PF02129_consen 223 RLDKIDVPVLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPWTHG 271 (272)
T ss_dssp HHGG--SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESESTT
T ss_pred HHhhCCCCEEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCCCCC
Confidence 358999999999999996666 56666667766533 2123334567774
No 103
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=38.24 E-value=2.7e+02 Score=24.27 Aligned_cols=100 Identities=11% Similarity=-0.038 Sum_probs=63.0
Q ss_pred hhhHHHHHHHHhCC---C--ccccccCCccccccc-CCccCccccccccCceEEEEeeCCCccCchHhHHHHHhhCCCce
Q psy3850 4 RYCGRFLSTSIDGR---K--FRQFDYGKDENLHIY-NSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPV 77 (215)
Q Consensus 4 vK~l~H~~Q~i~Sg---~--Fq~YDYG~~~Nl~~Y-Gq~tPP~YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~ 77 (215)
+-.+.||+..+.-. - ...+|-+...=...+ ++..| |+.....-|.+++.|+||..++.+--+.+++..++..
T Consensus 70 c~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf~~--~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~l 147 (181)
T COG3545 70 CATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTFDP--IPREPLPFPSVVVASRNDPYVSYEHAEDLANAWGSAL 147 (181)
T ss_pred HHHHHHHHHhhhhccceEEEecCCCccccccchhhccccCC--CccccCCCceeEEEecCCCCCCHHHHHHHHHhccHhh
Confidence 34567888776642 2 245665543222222 22332 5666677899999999999999999999999998632
Q ss_pred eeeEeeCCCCcccchhhcccchhHHHHHHHHH
Q psy3850 78 GLFKVNFTYFNHLDFLWAKDVKALVYNDLLLV 109 (215)
Q Consensus 78 ~~~~v~~~~fnHLDFIwg~da~~~VY~~II~i 109 (215)
+...+.+|+.-=-|-..=...|..+-++
T Consensus 148 ----v~~g~~GHiN~~sG~g~wpeg~~~l~~~ 175 (181)
T COG3545 148 ----VDVGEGGHINAESGFGPWPEGYALLAQL 175 (181)
T ss_pred ----eecccccccchhhcCCCcHHHHHHHHHH
Confidence 3456677776555555444455443333
No 104
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=37.54 E-value=32 Score=27.82 Aligned_cols=40 Identities=15% Similarity=0.196 Sum_probs=27.5
Q ss_pred ceEEEEeeCCCccCchHhHHHHHhhCCCc-eeeeEeeCCCCcc
Q psy3850 48 TKVAFFYADNDLLTNEQDVKELYTLLPNP-VGLFKVNFTYFNH 89 (215)
Q Consensus 48 vPV~LfyG~nD~La~p~DV~~L~~~LpNv-~~~~~v~~~~fnH 89 (215)
.|+++++|+.|.|.+ +...+.++|... +....+.+++-.|
T Consensus 167 Pp~~i~~g~~D~l~~--~~~~~~~~L~~~gv~v~~~~~~g~~H 207 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVD--DSLRFAEKLKKAGVDVELHVYPGMPH 207 (211)
T ss_dssp HEEEEEEETTSTTHH--HHHHHHHHHHHTT-EEEEEEETTEET
T ss_pred CCeeeeccccccchH--HHHHHHHHHHHCCCCEEEEEECCCeE
Confidence 599999999999974 667777777532 2223344566677
No 105
>KOG4391|consensus
Probab=36.31 E-value=73 Score=29.32 Aligned_cols=63 Identities=19% Similarity=0.160 Sum_probs=46.6
Q ss_pred cCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhc
Q psy3850 46 ISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTF 113 (215)
Q Consensus 46 ItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~ 113 (215)
-.+|.....|..|.|++|.-...|+..-|...+ ...++|+-.|-|-..+ |-. |+-|-++|.+.
T Consensus 220 ~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~K-rl~eFP~gtHNDT~i~-dGY---fq~i~dFlaE~ 282 (300)
T KOG4391|consen 220 CRMPFLFISGLKDELVPPVMMRQLYELCPSRTK-RLAEFPDGTHNDTWIC-DGY---FQAIEDFLAEV 282 (300)
T ss_pred ccCceEEeecCccccCCcHHHHHHHHhCchhhh-hheeCCCCccCceEEe-ccH---HHHHHHHHHHh
Confidence 358999999999999999999999998886433 4456899999997554 333 44444555443
No 106
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=32.66 E-value=54 Score=28.50 Aligned_cols=52 Identities=10% Similarity=0.007 Sum_probs=33.9
Q ss_pred cCceEEEEeeCCCccCch-HhHHHHHhhCCCc-eeeeEeeCCCCcccchhhccc
Q psy3850 46 ISTKVAFFYADNDLLTNE-QDVKELYTLLPNP-VGLFKVNFTYFNHLDFLWAKD 97 (215)
Q Consensus 46 ItvPV~LfyG~nD~La~p-~DV~~L~~~LpNv-~~~~~v~~~~fnHLDFIwg~d 97 (215)
...|+++.+|..|.+++. .....+.+.|... +.......+.-+|-=+.|..-
T Consensus 210 ~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~~~~ 263 (275)
T TIGR02821 210 RHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFIASF 263 (275)
T ss_pred cCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhHHHh
Confidence 457999999999999998 4555555555421 112334567788876666543
No 107
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=32.26 E-value=39 Score=29.59 Aligned_cols=28 Identities=21% Similarity=0.182 Sum_probs=24.4
Q ss_pred ceEEEEeeCCCccCchHhHHHHHhhCCC
Q psy3850 48 TKVAFFYADNDLLTNEQDVKELYTLLPN 75 (215)
Q Consensus 48 vPV~LfyG~nD~La~p~DV~~L~~~LpN 75 (215)
.|+.+|+|+.|..+.+..-+.+.++.-+
T Consensus 170 ~P~~v~hG~~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 170 YPRIVFHGTADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred CCEEEEecCCCCccCcchHHHHHHHHHH
Confidence 5899999999999999998888877654
No 108
>KOG2100|consensus
Probab=30.18 E-value=1.1e+02 Score=31.57 Aligned_cols=74 Identities=19% Similarity=0.039 Sum_probs=56.6
Q ss_pred cCccccccccCceE-EEEeeCCCccCchHhHHHHHhhCCC-ceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHh
Q psy3850 37 FPPKYDLKFISTKV-AFFYADNDLLTNEQDVKELYTLLPN-PVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKT 112 (215)
Q Consensus 37 tPP~YnLsnItvPV-~LfyG~nD~La~p~DV~~L~~~LpN-v~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k 112 (215)
.-|.+++.+|+.|. .|++|..|.-+..+.-..+.+.|.+ .+....+.+++=+|-.+ ..++...+|.++..+++.
T Consensus 671 ~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is--~~~~~~~~~~~~~~~~~~ 746 (755)
T KOG2100|consen 671 SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGIS--YVEVISHLYEKLDRFLRD 746 (755)
T ss_pred ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccc--cccchHHHHHHHHHHHHH
Confidence 34567888899887 7899999999999888888888864 23344566788888754 456667789999999883
No 109
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=29.99 E-value=1.2e+02 Score=26.87 Aligned_cols=44 Identities=20% Similarity=0.240 Sum_probs=33.7
Q ss_pred CceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCccc
Q psy3850 47 STKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHL 90 (215)
Q Consensus 47 tvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHL 90 (215)
...+.+|||.+|.=|+.+=.+.|.+..|+......+..++..|.
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~~~i~Ha 264 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDEEGIPHA 264 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEecCCCCCC
Confidence 45899999999999998888999999995322244555777773
No 110
>cd07936 SCAN SCAN oligomerization domain. The SCAN domain (named after SRE-ZBP, CTfin51, AW-1 and Number 18 cDNA) is found in several vertebrate proteins that contain C2H2 zinc finger motifs, many of which may be transcription factors playing roles in cell survival and differentiation. This protein-interaction domain is able to mediate homo- and hetero-oligomerization of SCAN-containing proteins. Some SCAN-containing proteins, including those of lower vertebrates, do not contain zinc finger motifs. It has been noted that the SCAN domain resembles a domain-swapped version of the C-terminal domain of the HIV capsid protein. This domain model features elements common to the three general groups of SCAN domains (SCAN-A1, SCAN-A2, and SCAN-B). The SCAND1 protein is truncated at the C-terminus with respect to this model, the SCAND2 protein appears to have a truncated central helix.
Probab=28.34 E-value=27 Score=26.34 Aligned_cols=15 Identities=40% Similarity=0.981 Sum_probs=12.5
Q ss_pred hhHHHHhhcccCCCC
Q psy3850 196 STMREMLNHWIRPEP 210 (215)
Q Consensus 196 ~~~~~~~~~~~~~~~ 210 (215)
++.||+.++|+||+-
T Consensus 24 ~~L~eLc~~WLrpe~ 38 (85)
T cd07936 24 QRLRELCRQWLRPEI 38 (85)
T ss_pred HHHHHHHHHHcchhh
Confidence 456999999999984
No 111
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=28.10 E-value=68 Score=30.17 Aligned_cols=46 Identities=17% Similarity=0.084 Sum_probs=38.1
Q ss_pred ccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccch
Q psy3850 45 FISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDF 92 (215)
Q Consensus 45 nItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDF 92 (215)
+|++||.+--|.-|..|+|.-+--.++.|+..+. ....+.|+|-+.
T Consensus 257 RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~--i~iy~~~aHe~~ 302 (321)
T COG3458 257 RIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKT--IEIYPYFAHEGG 302 (321)
T ss_pred hhccceEEeecccCCCCCChhhHHHhhcccCCce--EEEeeccccccC
Confidence 5899999999999999999999999999987543 233577888764
No 112
>smart00431 SCAN leucine rich region.
Probab=27.14 E-value=32 Score=27.70 Aligned_cols=15 Identities=47% Similarity=1.032 Sum_probs=12.7
Q ss_pred hhHHHHhhcccCCCC
Q psy3850 196 STMREMLNHWIRPEP 210 (215)
Q Consensus 196 ~~~~~~~~~~~~~~~ 210 (215)
++.||+.++|+|||-
T Consensus 24 ~~L~eLc~~WLrPe~ 38 (113)
T smart00431 24 SRLRELCRQWLRPEL 38 (113)
T ss_pred HHHHHHHHhhcChhh
Confidence 456999999999974
No 113
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=27.11 E-value=71 Score=30.99 Aligned_cols=31 Identities=10% Similarity=0.086 Sum_probs=22.4
Q ss_pred cccCceEEEEeeCCCccCchHhHHHHHhhCC
Q psy3850 44 KFISTKVAFFYADNDLLTNEQDVKELYTLLP 74 (215)
Q Consensus 44 snItvPV~LfyG~nD~La~p~DV~~L~~~Lp 74 (215)
.+..+|+...+|.+|.+++.+|...+...=.
T Consensus 349 rr~~~plL~i~~~~D~v~P~eD~~lia~~s~ 379 (411)
T PF06500_consen 349 RRCPTPLLAINGEDDPVSPIEDSRLIAESST 379 (411)
T ss_dssp S-BSS-EEEEEETT-SSS-HHHHHHHHHTBT
T ss_pred CCCCcceEEeecCCCCCCCHHHHHHHHhcCC
Confidence 4466999999999999999999988776533
No 114
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=26.00 E-value=79 Score=29.60 Aligned_cols=60 Identities=17% Similarity=0.150 Sum_probs=35.9
Q ss_pred ccCCccCccccc----cccCceEEEEeeCCC-------ccCchHhH--HHHHhhCCCceeeeEeeCCCCcccchh
Q psy3850 32 IYNSTFPPKYDL----KFISTKVAFFYADND-------LLTNEQDV--KELYTLLPNPVGLFKVNFTYFNHLDFL 93 (215)
Q Consensus 32 ~YGq~tPP~YnL----snItvPV~LfyG~nD-------~La~p~DV--~~L~~~LpNv~~~~~v~~~~fnHLDFI 93 (215)
+++|+.|+.-.. -++++||.++=++-- .=+.|+.| +...++-..-. .+.-..+|+|+|++
T Consensus 161 k~~~t~P~iLty~p~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~p~--~hfV~~dYGHmDmL 233 (307)
T PF07224_consen 161 KGKQTPPPILTYVPQSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKPPC--AHFVAKDYGHMDML 233 (307)
T ss_pred CCCCCCCCeeecCCcccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcccc--eeeeeccccccccc
Confidence 466666665221 145589988765544 45667777 44555543222 23346889999986
No 115
>KOG2551|consensus
Probab=25.62 E-value=86 Score=28.29 Aligned_cols=66 Identities=12% Similarity=0.110 Sum_probs=46.8
Q ss_pred ccccccCceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhcccchhHHHHHHHHHHHhccc
Q psy3850 41 YDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSK 115 (215)
Q Consensus 41 YnLsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~da~~~VY~~II~iL~k~~~ 115 (215)
|-...|++|..=++|..|.+++..-.+.|++..++.... .-..+|+ |=+.. ..-++|.++|.....
T Consensus 157 ~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl----~HpggH~--VP~~~---~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 157 AYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVL----EHPGGHI--VPNKA---KYKEKIADFIQSFLQ 222 (230)
T ss_pred hhccCCCCCeeEEecccceeecchHHHHHHHhcCCCeEE----ecCCCcc--CCCch---HHHHHHHHHHHHHHH
Confidence 335578999999999999999999999999999875321 2345673 22222 223678888876643
No 116
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=22.94 E-value=51 Score=30.67 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=10.2
Q ss_pred ccccCceEEEEeeCCCccCch-HhHHHHHhhCCCc
Q psy3850 43 LKFISTKVAFFYADNDLLTNE-QDVKELYTLLPNP 76 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p-~DV~~L~~~LpNv 76 (215)
+..|+.|+.+.+|++|..+++ .|.+.|+++....
T Consensus 228 fG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a 262 (303)
T PF08538_consen 228 FGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAA 262 (303)
T ss_dssp GGG--S-EEEEEE--TT------------------
T ss_pred hccCCCceEEEecCCCceecccccccccccccccc
Confidence 445788999999999998865 4556688877653
No 117
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=22.45 E-value=1.5e+02 Score=28.15 Aligned_cols=46 Identities=17% Similarity=0.198 Sum_probs=36.7
Q ss_pred ceEEEEeeCCCccCchHhHHHHHhhCCCceeeeEeeCCCCcccchhhccc
Q psy3850 48 TKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVNFTYFNHLDFLWAKD 97 (215)
Q Consensus 48 vPV~LfyG~nD~La~p~DV~~L~~~LpNv~~~~~v~~~~fnHLDFIwg~d 97 (215)
..++++.+.+|..++...|..|.+..|+... .. ++. +|.+..+-..
T Consensus 290 ~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEv-R~--l~g-GHVsA~L~~q 335 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRHGVLSLQEIWPGSEV-RY--LPG-GHVSAYLLHQ 335 (348)
T ss_pred CcEEEEEecCceEechhhcchHHHhCCCCeE-EE--ecC-CcEEEeeech
Confidence 3578899999999999999999999998542 22 344 9999887765
No 118
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=21.26 E-value=92 Score=28.23 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=24.9
Q ss_pred ceEEEEeeCCCccCchHhHHHHHhhCC
Q psy3850 48 TKVAFFYADNDLLTNEQDVKELYTLLP 74 (215)
Q Consensus 48 vPV~LfyG~nD~La~p~DV~~L~~~Lp 74 (215)
++|.+|.|+.|.+|+.-..+..++.|.
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~ 260 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLN 260 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcC
Confidence 799999999999999999998888885
No 119
>cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.
Probab=20.87 E-value=82 Score=18.82 Aligned_cols=38 Identities=11% Similarity=0.427 Sum_probs=25.2
Q ss_pred ccchhHHHHHhhcCC-CchhHHHHhhhchhhHHHHhhccc
Q psy3850 168 KRSDQTFMQKISAFP-GDFSRKMERKWNNSTMREMLNHWI 206 (215)
Q Consensus 168 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 206 (215)
...++.|.+.+..++ ++|. ++.+...+.|..+.-++|.
T Consensus 4 ~eE~~~l~~~~~~~g~~~w~-~Ia~~~~~rs~~~~~~~~~ 42 (45)
T cd00167 4 EEEDELLLEAVKKYGKNNWE-KIAKELPGRTPKQCRERWR 42 (45)
T ss_pred HHHHHHHHHHHHHHCcCCHH-HHHhHcCCCCHHHHHHHHH
Confidence 345677778888887 6664 4555666677777766663
No 120
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=20.32 E-value=2e+02 Score=25.22 Aligned_cols=64 Identities=16% Similarity=0.123 Sum_probs=40.0
Q ss_pred ccccCceEEEEeeCCCccCchHhHHHHHhhCCCc-eeeeEeeCCCCcccch--hhcccchhHHHHHHHHHHH
Q psy3850 43 LKFISTKVAFFYADNDLLTNEQDVKELYTLLPNP-VGLFKVNFTYFNHLDF--LWAKDVKALVYNDLLLVLK 111 (215)
Q Consensus 43 LsnItvPV~LfyG~nD~La~p~DV~~L~~~LpNv-~~~~~v~~~~fnHLDF--Iwg~da~~~VY~~II~iL~ 111 (215)
++. -.|+.++.|+.|.|.+ |.+.+.+.|... +.......+.-.| +| +-+..+.+ -+..|.+.++
T Consensus 242 ~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H-~f~~~~~~~a~~-~~~~~~~~l~ 308 (312)
T COG0657 242 LSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIH-GFDLLTGPEARS-ALRQIAAFLR 308 (312)
T ss_pred ccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcce-eccccCcHHHHH-HHHHHHHHHH
Confidence 344 4789999999999998 777777777532 2223445677788 66 33222333 2455666554
No 121
>PRK00819 RNA 2'-phosphotransferase; Reviewed
Probab=20.16 E-value=1.6e+02 Score=25.24 Aligned_cols=56 Identities=9% Similarity=0.091 Sum_probs=40.3
Q ss_pred hHHHHHHHHhCCCccccccCCcccccccCCccCccccccccCceEEEEeeCCCccC
Q psy3850 6 CGRFLSTSIDGRKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLT 61 (215)
Q Consensus 6 ~l~H~~Q~i~Sg~Fq~YDYG~~~Nl~~YGq~tPP~YnLsnItvPV~LfyG~nD~La 61 (215)
+..|..+++.++.=++|..-...=...||-+.+...++.....|-.||||..-...
T Consensus 51 t~~~l~~vV~~d~K~Rf~l~~~~IRA~qGHSi~v~~~~~~~~~P~~lyHGT~~~~~ 106 (179)
T PRK00819 51 TRELLEAVVESDDKGRFEISGDRIRARQGHSVDVDLDLEEDTPPAVLYHGTSSEEL 106 (179)
T ss_pred CHHHHHHHHHcCCCcceEecCceEEeccCcCCccccCCccCCCCceeEeCCCHHHH
Confidence 45677788887666666653222335788888878888888889999999876555
Done!