RPS-BLAST 2.2.26 [Sep-21-2011]

Database: CDD.v3.10 
           44,354 sequences; 10,937,602 total letters

Searching..................................................done

Query= psy3850
         (215 letters)



>gnl|CDD|215470 PLN02872, PLN02872, triacylglycerol lipase.
          Length = 395

 Score = 48.3 bits (115), Expect = 7e-07
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 6/112 (5%)

Query: 8   RFLSTSIDGRKFRQFDYGKDENLHIYNSTFPPKYDLKFISTKVAFF--YADNDLLTNEQD 65
           R L   I    F  +DYG  +NL +Y    PP +DL  I   +  +  Y   D L +  D
Sbjct: 284 RHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTD 343

Query: 66  VKELYTLLPN-PVGLFKVNFTYFNHLDFLWAKDVKALVYNDLLLVLKTFSKT 116
           V+     LP+ P  L+  N   + H+DFL +   K  VYN ++   ++  K+
Sbjct: 344 VEHTLAELPSKPELLYLEN---YGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392


>gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family.  This family
           contains a diverse range of alpha/beta hydrolase
           enzymes.
          Length = 145

 Score = 31.6 bits (72), Expect = 0.14
 Identities = 9/53 (16%), Positives = 18/53 (33%)

Query: 30  LHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKV 82
           +           DL  ++  V   +   D +   ++ + L   LP P  L  +
Sbjct: 87  VLAAGDPPDALDDLAKLTVPVLIIHGTRDGVVPPEEAEALAAALPGPAELVVI 139


>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and
           cobyric acid decarboxylase [Amino acid transport and
           metabolism].
          Length = 356

 Score = 29.6 bits (67), Expect = 1.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 91  DFLWAKDVKALVYNDLLLVLKTFSKTRA 118
           +F     ++ L Y   L+VL+TFSK   
Sbjct: 188 EFSPESSLELLKYPPNLIVLRTFSKAFG 215


>gnl|CDD|226077 COG3547, COG3547, Transposase and inactivated derivatives [DNA
           replication, recombination, and repair].
          Length = 303

 Score = 28.0 bits (62), Expect = 3.9
 Identities = 20/130 (15%), Positives = 35/130 (26%), Gaps = 17/130 (13%)

Query: 85  TYFNHLDFLWAKDVKALVYNDLLL----VLKTFSKTRARSEVLTVTNVIPQNPSLISDTD 140
              N   +L A+     + N   +      K     +A +  + V  + P+         
Sbjct: 46  YSENLARYLRAEGYPVRLINPRQVKKKARGKRAKTDKADALAIAVAALRPKL-------- 97

Query: 141 QGSPWERYLQMTMTERSLYATEKRLSTKRSDQTFMQKISAFP---GDFSRKMERKWNNST 197
              P     +     R L    +RL   R+      +        GDF      K     
Sbjct: 98  --EPVSVPSEEQRALRELKRRRRRLLRLRTQLDNRIRGLLEEFGLGDFPELRLLKELAEI 155

Query: 198 MREMLNHWIR 207
           +   L+   R
Sbjct: 156 VLYELDELAR 165


>gnl|CDD|113237 pfam04458, DUF505, Protein of unknown function (DUF505).  Family of
           uncharacterized prokaryotic proteins.
          Length = 591

 Score = 27.5 bits (61), Expect = 6.3
 Identities = 30/153 (19%), Positives = 46/153 (30%), Gaps = 32/153 (20%)

Query: 24  YGKDENLHIYNSTFPPKYDLKFISTKVAFFYADNDLLTNEQDVKELYTLLPNPVGLFKVN 83
           YGK   L IY  T P  Y    ++ +VA +                   +P   G     
Sbjct: 127 YGK-AVLEIYRETHPKLY----VTPEVAGYIRK----------------MPPGPGELDEL 165

Query: 84  FTYFNHLD-----FLWAKDVKALVYNDLLLVLKTFSKTRARSEVLTVTNVIPQ------N 132
            TY + L      FL  + ++ L  +        ++ T    EVL      P        
Sbjct: 166 ITYKSTLPYGDNIFLALEAMRLLAISPPTEKGDAYALTGLGQEVLKALRKAPVAMDALIL 225

Query: 133 PSLISDTDQGSPWERYLQMTMTERSLYATEKRL 165
             ++ D       E   +    ER  +  E  L
Sbjct: 226 RKIMEDFVAVEELEEGERNVELERGGFDWEGSL 258


  Database: CDD.v3.10
    Posted date:  Mar 20, 2013  7:55 AM
  Number of letters in database: 10,937,602
  Number of sequences in database:  44,354
  
Lambda     K      H
   0.320    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0695    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 10,825,277
Number of extensions: 970955
Number of successful extensions: 680
Number of sequences better than 10.0: 1
Number of HSP's gapped: 679
Number of HSP's successfully gapped: 17
Length of query: 215
Length of database: 10,937,602
Length adjustment: 93
Effective length of query: 122
Effective length of database: 6,812,680
Effective search space: 831146960
Effective search space used: 831146960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (25.8 bits)