Your job contains 1 sequence.
>psy3854
MTEDAGSSNESSPAEEPGKYVLKPKDNTENSKKYKKGIIYLSKVPPHMNVTQLTEFMSRF
GEVGRVYLMPKKRKPGEKKPAKQFTEGWIEFLKKKVAKQVAAQYNNTQIDCRKRSKHYDF
IWNFKYLPRFKWIHLNERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVADRIQKKNGK
KKTNVPEQSSNKKNDGKGKQIVKKSNTKPVEDRKQFLTSLFS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3854
(222 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0052708 - symbol:CG32708 species:7227 "Drosophila ... 371 3.6e-34 1
CGD|CAL0002361 - symbol:orf19.3161 species:5476 "Candida ... 258 3.5e-25 2
ZFIN|ZDB-GENE-050522-127 - symbol:abt1 "activator of basa... 285 4.6e-25 1
POMBASE|SPBC28E12.05 - symbol:esf2 "U3 snoRNP-associated ... 280 1.6e-24 1
MGI|MGI:1353636 - symbol:Abt1 "activator of basal transcr... 272 1.1e-23 1
RGD|1310785 - symbol:Abt1 "activator of basal transcripti... 267 3.8e-23 1
TAIR|locus:2102594 - symbol:AT3G56510 species:3702 "Arabi... 264 7.8e-23 1
UNIPROTKB|Q9ULW3 - symbol:ABT1 "Activator of basal transc... 259 2.6e-22 1
DICTYBASE|DDB_G0293576 - symbol:esf2 "U3 snoRNP-associate... 254 9.0e-22 1
UNIPROTKB|Q148M8 - symbol:ABT1 "Activator of basal transc... 253 1.1e-21 1
UNIPROTKB|J9P2J3 - symbol:ABT1 "Uncharacterized protein" ... 252 1.5e-21 1
UNIPROTKB|F1RQ93 - symbol:LOC100156526 "Uncharacterized p... 251 1.9e-21 1
WB|WBGene00019005 - symbol:F57B10.8 species:6239 "Caenorh... 250 2.4e-21 1
FB|FBgn0085521 - symbol:CG40813 species:7227 "Drosophila ... 242 1.7e-20 1
FB|FBgn0085693 - symbol:CG41562 species:7227 "Drosophila ... 241 2.1e-20 1
SGD|S000005337 - symbol:ESF2 "Essential nucleolar protein... 240 2.7e-20 1
UNIPROTKB|G4N0U5 - symbol:MGG_05815 "Pre-rRNA-processing ... 217 7.8e-18 1
FB|FBgn0030524 - symbol:CG10993 species:7227 "Drosophila ... 204 1.8e-16 1
ASPGD|ASPL0000064131 - symbol:AN7305 species:162425 "Emer... 197 2.3e-15 1
FB|FBgn0052706 - symbol:CG32706 species:7227 "Drosophila ... 188 8.8e-15 1
FB|FBgn0030085 - symbol:CG6999 species:7227 "Drosophila m... 184 2.3e-14 1
>FB|FBgn0052708 [details] [associations]
symbol:CG32708 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0022008 GO:GO:0000166 EMBL:AE014298
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00390000002062
KO:K14785 OrthoDB:EOG4NS1TQ EMBL:BT029073 RefSeq:NP_727306.1
UniGene:Dm.23782 SMR:Q9W394 IntAct:Q9W394 MINT:MINT-926850
STRING:Q9W394 EnsemblMetazoa:FBtr0071286 GeneID:318161
KEGG:dme:Dmel_CG32708 UCSC:CG32708-RA FlyBase:FBgn0052708
InParanoid:Q9W394 OMA:NTIPRDM GenomeRNAi:318161 NextBio:845024
Uniprot:Q9W394
Length = 239
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 78/203 (38%), Positives = 115/203 (56%)
Query: 3 EDAGSSNESSPAEEPGKYVLKPKDNTENS----KKYKKGIIYLSKVPPHMNVTQLTEFMS 58
E ++ E++P+++ L T +S KK K GIIY+S +P HMNVT+L E +
Sbjct: 36 EGETANGEANPSDDDDDMDLANFKATSSSSAPAKKRKMGIIYISNIPKHMNVTRLREILG 95
Query: 59 RFGEVGRVYLMXXXXXXXXXXXXXQ------FTEGWIEFLXXXXXXXXXXXYNNTQIDCR 112
+G +GRVYL + FTEGW+EF NN QI R
Sbjct: 96 EYGAIGRVYLQPEKLSSAKAKKNKRKRYNIHFTEGWVEFKSKRVAKQIVPLLNNKQISGR 155
Query: 113 KRSKHYDFIWNFKYLPRFKWIHLNERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVAD 172
K S+ YD +W+ KYLPRFKW+HL ER+ YE+ H+Q+L E+++A++E +F NNLD ++
Sbjct: 156 KTSQFYDSLWSMKYLPRFKWVHLTERMNYEQAVHKQRLHTEVSQARKETTFFQNNLDKSE 215
Query: 173 RIQKKNGKKKTNVPEQSSNKKND 195
I+K+ KK N E++ K+D
Sbjct: 216 FIRKQ-AKKAKNA-EKALAAKSD 236
>CGD|CAL0002361 [details] [associations]
symbol:orf19.3161 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0034462 "small-subunit
processome assembly" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0001671 "ATPase activator activity" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:NOG332037 KO:K14785 EMBL:AACQ01000100 EMBL:AACQ01000097
GO:GO:0006364 RefSeq:XP_714579.1 RefSeq:XP_714709.1
ProteinModelPortal:Q59YL9 STRING:Q59YL9 GeneID:3643622
GeneID:3643746 KEGG:cal:CaO19.10670 KEGG:cal:CaO19.3161
Uniprot:Q59YL9
Length = 320
Score = 258 (95.9 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 64/216 (29%), Positives = 105/216 (48%)
Query: 22 LKPKDNTENSKKYKK-GIIYLSKVPPHMNVTQLTEFMSRFGEVGRVYL------MXXXXX 74
L K+ + K+ K+ G+ YLS+VPP+M +L +SRFGE+ R++L +
Sbjct: 108 LTSKELAKEQKRIKRTGVCYLSRVPPYMKPAKLRSVLSRFGEIDRLFLKPEDPSVYHKRV 167
Query: 75 XXXXXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSKHYDFIWNFKYLPRFKWIH 134
FTEGWIEF+ N ++ +K S +YD I N KYLP FKW+
Sbjct: 168 KYGGNKKKNFTEGWIEFVNKSDAKLCAATLNGNKLGGKKTSYYYDDIINIKYLPGFKWLD 227
Query: 135 LNERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVADRIQKKNGKKKTNVPEQSSNKKN 194
L +++A E + + KL EI++ ++ F +N++ + I K+KT N +
Sbjct: 228 LTQQIAKENEVRQAKLAMEISQQQKLNKSFVSNVEKSKMIANIQKKRKTT---DDDNIRR 284
Query: 195 DGKGKQIVK---------KSNTKPVEDRKQFLTSLF 221
D K +++ KS +KP + L+ +F
Sbjct: 285 DFKQRKVTTTRSDAKDDLKSKSKPTDKLNDILSKVF 320
Score = 43 (20.2 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 3 EDAGSSNESSPAEEPGKYVLKPKDNTEN 30
ED E ++ G KPKD N
Sbjct: 42 EDFSEDEEDKDEQDEGDTKTKPKDGKHN 69
>ZFIN|ZDB-GENE-050522-127 [details] [associations]
symbol:abt1 "activator of basal transcription 1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 SMART:SM00360 ZFIN:ZDB-GENE-050522-127
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 CTD:29777
GeneTree:ENSGT00390000002062 HOGENOM:HOG000242500
HOVERGEN:HBG057308 KO:K14785 OMA:PGFKWAD EMBL:CR457452
EMBL:BC095115 IPI:IPI00607266 RefSeq:NP_001018383.1
UniGene:Dr.84063 STRING:Q503Z6 Ensembl:ENSDART00000064113
GeneID:553568 KEGG:dre:553568 InParanoid:Q503Z6 NextBio:20880307
Uniprot:Q503Z6
Length = 305
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 60/191 (31%), Positives = 103/191 (53%)
Query: 32 KKYKKGIIYLSKVPPHMNVTQLTEFMSRFGEVGRVYLM-----XXXXXXXXXXXXXQFTE 86
KK GI+YL +PP M + +S +GE+GR++L FTE
Sbjct: 81 KKCVPGIVYLGHIPPRMRPKHMRNLLSAYGEIGRIFLQPEDRCVKRKKKKAGCKSSSFTE 140
Query: 87 GWIEFLXXXXXXXXXXXYNNTQIDCRKRSKHYDFIWNFKYLPRFKWIHLNERLAYEKQAH 146
GW+EF +NT + RKRS+ +W+ KYL RF+W HL+ERLAYE+ +
Sbjct: 141 GWVEFRDKRVAKRVAASLHNTPMANRKRSRFSSDLWSIKYLHRFQWCHLSERLAYEQTVY 200
Query: 147 RQKLRAEIAEAKREALYFSNNLDVA---DRIQKKNGKKKTNVPEQSSNKKNDGKGKQI-V 202
Q++R EI++AK+E ++ +++ + ++++KK KK V E++ + K ++I +
Sbjct: 201 HQRMRTEISQAKKETNFYLASVEKSQSLEKLRKKRAKKGEVVEEKTWDYKQRPTEEEIHL 260
Query: 203 KKSNTKPVEDR 213
K+ +K + +
Sbjct: 261 KRFKSKGISKK 271
>POMBASE|SPBC28E12.05 [details] [associations]
symbol:esf2 "U3 snoRNP-associated protein Esf2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 PomBase:SPBC28E12.05 GO:GO:0005730
GO:GO:0000166 EMBL:CU329671 Gene3D:3.30.70.330
GenomeReviews:CU329671_GR GO:GO:0003723 eggNOG:NOG332037
HOGENOM:HOG000242500 KO:K14785 HSSP:P40343 GO:GO:0006364
OrthoDB:EOG40VZZV PIR:T40042 RefSeq:NP_595758.1
ProteinModelPortal:O74362 STRING:O74362 EnsemblFungi:SPBC28E12.05.1
GeneID:2540503 KEGG:spo:SPBC28E12.05 OMA:ENAARES NextBio:20801630
Uniprot:O74362
Length = 334
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 73/237 (30%), Positives = 115/237 (48%)
Query: 3 EDAGSSNESSPAEEPGKYVLKPKD-NTENSKKYKK-----GIIYLSKVPPHMNVTQLTEF 56
ED +E+ EE K K + E +K +K G+IYLS++PP+M +L +
Sbjct: 82 EDFSGGSENELDEETTKNANSIKKISLEEVEKQRKAIKRSGVIYLSRIPPYMAPNKLRQI 141
Query: 57 MSRFGEVGRVYLMXXXXXXXXXXXXX------QFTEGWIEFLXXXXXXXXXXXYNNTQID 110
+S++G++GRVYL + EGWIEF N QI
Sbjct: 142 LSQYGKIGRVYLTPESSAKRAQRLRNGGNKRVMYEEGWIEFESKRVAKSVAELLNTNQIG 201
Query: 111 CRKRSKHYDFIWNFKYLPRFKWIHLNERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDV 170
+K S ++D IWN KYLP+FKW HL E++A E A +L+ EI + +++ + N++
Sbjct: 202 GKKSSWYHDDIWNMKYLPKFKWHHLTEQIAAENAARESRLKVEIEQGRKQLKQYMRNVEN 261
Query: 171 A---DRIQKKNGKKKT-NV----PEQSSNKKNDGK-GKQIVKKSNTKPVEDRKQFLT 218
A + I+KK ++ T NV PE++ + D K KQ + K + + T
Sbjct: 262 AKMIEGIRKKRSERDTLNVSTEFPEETKDLSEDTKPSKQARRFFGQKSIVSNRNMPT 318
>MGI|MGI:1353636 [details] [associations]
symbol:Abt1 "activator of basal transcription 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0021522 "spinal
cord motor neuron differentiation" evidence=IGI] InterPro:IPR012677
PROSITE:PS50102 MGI:MGI:1353636 GO:GO:0005730 GO:GO:0000166
GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006357 GO:GO:0003723
GO:GO:0005667 CTD:29777 eggNOG:NOG332037
GeneTree:ENSGT00390000002062 HOGENOM:HOG000242500
HOVERGEN:HBG057308 KO:K14785 OMA:HVPPRFR OrthoDB:EOG4S1T7W
GO:GO:0021522 GO:GO:0006366 EMBL:AB021860 EMBL:AK009557
EMBL:AK029222 EMBL:AL714025 EMBL:BC082609 IPI:IPI00471226
RefSeq:NP_038952.1 UniGene:Mm.292094 ProteinModelPortal:Q9QYL7
SMR:Q9QYL7 STRING:Q9QYL7 PhosphoSite:Q9QYL7 PRIDE:Q9QYL7
Ensembl:ENSMUST00000041782 GeneID:30946 KEGG:mmu:30946
UCSC:uc007pto.1 InParanoid:Q0VGU7 NextBio:307402 Bgee:Q9QYL7
CleanEx:MM_ABT1 Genevestigator:Q9QYL7 GermOnline:ENSMUSG00000036376
Uniprot:Q9QYL7
Length = 269
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 62/191 (32%), Positives = 90/191 (47%)
Query: 3 EDAGSSNESSPAEEPGKYVLKPKDNTENSKKYKKGIIYLSKVPPHMNVTQLTEFMSRFGE 62
E+ ++ + EEP +++ KK GI+YL VPP + +S +GE
Sbjct: 16 EEEANAEAAEDQEEPEDTACS--SSSKKKKKVVPGIVYLGHVPPRFRPLHVRNLLSAYGE 73
Query: 63 VGRVYLMX-------------XXXXXXXXXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQI 109
VGRV+ +TEGW+EF +NT +
Sbjct: 74 VGRVFFQAEDHFVKRKKKAAAAAGGKKGAKYSKDYTEGWVEFRDKRVAKRVAASLHNTPM 133
Query: 110 DCRKRSK-HYDFIWNFKYLPRFKWIHLNERLAYEKQAHRQKLRAEIAEAKREALYFSNNL 168
RKRS YD +WN KYL RF W HL+E LA+E+Q RQ+LRAE+A+AKRE ++ N+
Sbjct: 134 GARKRSPFRYD-LWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLRNV 192
Query: 169 DVADRIQKKNG 179
+ +G
Sbjct: 193 EQGQHFLAADG 203
>RGD|1310785 [details] [associations]
symbol:Abt1 "activator of basal transcription 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=ISO] InterPro:IPR012677
PROSITE:PS50102 RGD:1310785 GO:GO:0005730 GO:GO:0006355
GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351
GO:GO:0003723 CTD:29777 eggNOG:NOG332037
GeneTree:ENSGT00390000002062 HOGENOM:HOG000242500
HOVERGEN:HBG057308 KO:K14785 OMA:HVPPRFR OrthoDB:EOG4S1T7W
EMBL:BC099109 IPI:IPI00366354 RefSeq:NP_001020845.1
UniGene:Rn.16564 STRING:Q4KLM5 PRIDE:Q4KLM5
Ensembl:ENSRNOT00000023649 GeneID:306960 KEGG:rno:306960
UCSC:RGD:1310785 InParanoid:Q4KLM5 NextBio:656746
Genevestigator:Q4KLM5 GermOnline:ENSRNOG00000017585 Uniprot:Q4KLM5
Length = 268
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 59/164 (35%), Positives = 81/164 (49%)
Query: 30 NSKKYKKGIIYLSKVPPHMNVTQLTEFMSRFGEVGRVYLMX-------------XXXXXX 76
+ KK GI+YL VPP + +S +GEVGRV+
Sbjct: 40 SKKKVVPGIVYLGHVPPRFRPLHVRNLLSVYGEVGRVFFQAEDPFVRRKKKAAAAAGGKK 99
Query: 77 XXXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSK-HYDFIWNFKYLPRFKWIHL 135
+TEGW+EF +NT + RKRS YD +WN KYL RF W HL
Sbjct: 100 GAKYSKDYTEGWVEFRDKRIAKRVAASLHNTPMGARKRSPFRYD-LWNLKYLHRFTWSHL 158
Query: 136 NERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVADRIQKKNG 179
+E LA+E+Q RQ+LRAE+A+AKRE ++ N++ R +G
Sbjct: 159 SEHLAFERQVRRQRLRAEVAQAKRETDFYLRNVEQGQRFLAADG 202
>TAIR|locus:2102594 [details] [associations]
symbol:AT3G56510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0017025 "TBP-class protein binding" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012677 SMART:SM00360 EMBL:CP002686
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG332037
HOGENOM:HOG000242500 KO:K14785 EMBL:BT010761 EMBL:BT011791
EMBL:AK228191 IPI:IPI00528350 RefSeq:NP_001030873.1
RefSeq:NP_191210.2 UniGene:At.34931 ProteinModelPortal:Q6NM71
SMR:Q6NM71 STRING:Q6NM71 PaxDb:Q6NM71 PRIDE:Q6NM71 ProMEX:Q6NM71
EnsemblPlants:AT3G56510.1 EnsemblPlants:AT3G56510.2 GeneID:824818
KEGG:ath:AT3G56510 TAIR:At3g56510 InParanoid:Q6NM71 OMA:SIENETS
PhylomeDB:Q6NM71 ProtClustDB:CLSN2680425 Genevestigator:Q6NM71
Uniprot:Q6NM71
Length = 257
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 60/197 (30%), Positives = 101/197 (51%)
Query: 3 EDAGSSNESSPAEEPGKYVLKPKDNTENSKKYKKGIIYLSKVPPHMNVTQLTEFMSRFGE 62
+++ + +S A+ K LK K E SK +G+ YLS++PPHM+ +L ++++GE
Sbjct: 17 KESKETMKSQKADRKKKK-LKEKLLKEASKADNRGVCYLSRIPPHMDHVRLRHILAQYGE 75
Query: 63 VGRVYLMXXXXXXXXXXXXX------QFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSK 116
+GR+YL +F+EGW+EF N QI +K+S
Sbjct: 76 LGRIYLAPEDSEAQVHRKRAGGFRGQRFSEGWVEFAKKSVAKRVADMLNGEQIGGKKKSS 135
Query: 117 HYDFIWNFKYLPRFKWIHLNERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVADRIQK 176
Y IWN KYL +FKW L E +AY+ QKL ++ AKRE ++ + ++ + + +
Sbjct: 136 VYYDIWNIKYLTKFKWDDLTEEIAYKSAIREQKLNMVLSAAKREKDFYLSKIEKSRAMTE 195
Query: 177 KNGK--KKTNVPEQSSN 191
+ + KK + E+S +
Sbjct: 196 IDARMEKKRKIQEESGS 212
>UNIPROTKB|Q9ULW3 [details] [associations]
symbol:ABT1 "Activator of basal transcription 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] InterPro:IPR012677 PROSITE:PS50102 GO:GO:0005634
GO:GO:0005730 GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330
GO:GO:0006357 GO:GO:0003723 GO:GO:0005667 GO:GO:0003713 CTD:29777
eggNOG:NOG332037 HOGENOM:HOG000242500 HOVERGEN:HBG057308 KO:K14785
OMA:HVPPRFR OrthoDB:EOG4S1T7W GO:GO:0021522 GO:GO:0006366
EMBL:AB027258 EMBL:AL513548 EMBL:BC048812 EMBL:BC066313
IPI:IPI00002938 RefSeq:NP_037507.1 UniGene:Hs.254406
ProteinModelPortal:Q9ULW3 SMR:Q9ULW3 IntAct:Q9ULW3 STRING:Q9ULW3
PhosphoSite:Q9ULW3 DMDM:74753396 PRIDE:Q9ULW3 DNASU:29777
Ensembl:ENST00000274849 GeneID:29777 KEGG:hsa:29777 UCSC:uc003nii.3
GeneCards:GC06P026597 HGNC:HGNC:17369 neXtProt:NX_Q9ULW3
PharmGKB:PA38451 InParanoid:Q9ULW3 PhylomeDB:Q9ULW3
GenomeRNAi:29777 NextBio:52298 Bgee:Q9ULW3 CleanEx:HS_ABT1
Genevestigator:Q9ULW3 GermOnline:ENSG00000146109 Uniprot:Q9ULW3
Length = 272
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 55/163 (33%), Positives = 81/163 (49%)
Query: 30 NSKKYKKGIIYLSKVPPHMNVTQLTEFMSRFGEVGRVYLMX------------XXXXXXX 77
+ K+ GI+YL +PP + +S +GEVGRV+
Sbjct: 39 SKKRVVPGIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKK 98
Query: 78 XXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSK-HYDFIWNFKYLPRFKWIHLN 136
+TEGW+EF +NT + R+RS YD +WN KYL RF W HL+
Sbjct: 99 RSYTKDYTEGWVEFRDKRIAKRVAASLHNTPMGARRRSPFRYD-LWNLKYLHRFTWSHLS 157
Query: 137 ERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVADRIQKKNG 179
E LA+E+Q RQ+LRAE+A+AKRE ++ +++ R +G
Sbjct: 158 EHLAFERQVRRQRLRAEVAQAKRETDFYLQSVERGQRFLAADG 200
>DICTYBASE|DDB_G0293576 [details] [associations]
symbol:esf2 "U3 snoRNP-associated protein Esf2"
species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 dictyBase:DDB_G0293576
GenomeReviews:CM000155_GR GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG332037 KO:K14785
EMBL:AAFI02000218 GO:GO:0006364 RefSeq:XP_629017.1
ProteinModelPortal:Q54BL2 STRING:Q54BL2 EnsemblProtists:DDB0266368
GeneID:8629301 KEGG:ddi:DDB_G0293576 OMA:PGFKWAD
ProtClustDB:CLSZ2846560 Uniprot:Q54BL2
Length = 296
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 60/205 (29%), Positives = 98/205 (47%)
Query: 22 LKPKDNTENSKKYK-----KGIIYLSKVPPHMNVTQLTEFMSRFGEVGRVYLMXXXXXXX 76
+KP D E KK K KGIIYLS +P M +L + ++++G+V R++L+
Sbjct: 91 IKPMD-IEKMKKLKEQNENKGIIYLSTIPSRMKPAKLKQLLAKYGKVTRMHLVRANVERK 149
Query: 77 XXXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSKHYDFIWNFKYLPRFKWIHLN 136
F EGWIEF NN + + R H D +WN +YLP+FKW HL
Sbjct: 150 NHRND-MFKEGWIEFEDKALARKIATILNNIPMGGKARDIHKDCLWNLRYLPKFKWHHLQ 208
Query: 137 ERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVADRIQKKNGKKKTNVPEQ------SS 190
++L ++ +KLR EI + +++ L ++++ + +K+ K + E+
Sbjct: 209 DKLVSQRMERDKKLRLEINQVRKQNLILLEQVELSKHVNQKHESKGKPIKEKVVRTFKQR 268
Query: 191 NKKNDGKGKQIVKKSNTKPVEDRKQ 215
+ D I K K V ++KQ
Sbjct: 269 SSHEDSLNSNISSKVLEKVVSNKKQ 293
>UNIPROTKB|Q148M8 [details] [associations]
symbol:ABT1 "Activator of basal transcription 1"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR012677
PROSITE:PS50102 GO:GO:0005730 GO:GO:0000166 GO:GO:0003677
Gene3D:3.30.70.330 GO:GO:0006357 GO:GO:0003723 GO:GO:0005667
EMBL:BC118119 IPI:IPI00702129 RefSeq:NP_001069620.1
UniGene:Bt.24078 STRING:Q148M8 PRIDE:Q148M8
Ensembl:ENSBTAT00000014277 GeneID:539270 KEGG:bta:539270 CTD:29777
eggNOG:NOG332037 GeneTree:ENSGT00390000002062 HOGENOM:HOG000242500
HOVERGEN:HBG057308 InParanoid:Q148M8 KO:K14785 OMA:HVPPRFR
OrthoDB:EOG4S1T7W NextBio:20877889 GO:GO:0021522 GO:GO:0006366
Uniprot:Q148M8
Length = 275
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 62/189 (32%), Positives = 91/189 (48%)
Query: 8 SNESSPAEEPGKYVLKPKDNTENSKK-YKKGIIYLSKVPPHMNVTQLTEFMSRFGEVGRV 66
S++ AEE + + +D SKK GI+YL +PP + +S +GEVGRV
Sbjct: 19 SHQKLEAEEEQE---ESEDAAGGSKKRVVPGIVYLGHIPPRFRPLHVRNLLSAYGEVGRV 75
Query: 67 YLMX---------------XXXXXXXXXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQIDC 111
+ +TEGW+EF +NT +
Sbjct: 76 FFQAEDGFVKRKKKAAAASAAGGKKRSKYSKDYTEGWVEFRDKRVAKRVAVSLHNTPMGS 135
Query: 112 RKRSK-HYDFIWNFKYLPRFKWIHLNERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDV 170
R+RS YD +WN KYL RF W HL+E LA+E+Q RQ+LRAE+A+AKRE ++ +++
Sbjct: 136 RRRSPFRYD-LWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLRSVER 194
Query: 171 ADRIQKKNG 179
R +G
Sbjct: 195 GQRFLAADG 203
>UNIPROTKB|J9P2J3 [details] [associations]
symbol:ABT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330
GeneTree:ENSGT00390000002062 OMA:HVPPRFR EMBL:AAEX03017609
Ensembl:ENSCAFT00000049560 Uniprot:J9P2J3
Length = 308
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 56/164 (34%), Positives = 80/164 (48%)
Query: 32 KKYKKGIIYLSKVPPHMNVTQLTEFMSRFGEVGRVYLM---------------XXXXXXX 76
K+ GI+YL +PP + +S FGEVGRV+
Sbjct: 74 KRVVPGIVYLGHLPPRFRPLHVRNLLSAFGEVGRVFFQPEDGFVRRKKKAVSASATGGKK 133
Query: 77 XXXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSK-HYDFIWNFKYLPRFKWIHL 135
+TEGW+EF +NT + R+RS YD +WN KYL RF W HL
Sbjct: 134 RSKYSKDYTEGWVEFRDKRVAKRVAASLHNTPMGARRRSPFRYD-LWNLKYLHRFTWSHL 192
Query: 136 NERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVADRIQKKNG 179
+E LA+E+Q RQ+LRAE+A+AKRE ++ +++ R +G
Sbjct: 193 SEHLAFERQVRRQRLRAEVAQAKRETDFYLRSVERGQRFLATDG 236
>UNIPROTKB|F1RQ93 [details] [associations]
symbol:LOC100156526 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330
GeneTree:ENSGT00390000002062 KO:K14785 OMA:HVPPRFR EMBL:CU469443
EMBL:CU469442 RefSeq:XP_001926341.2 RefSeq:XP_001928444.1
Ensembl:ENSSSCT00000001251 Ensembl:ENSSSCT00000001258
GeneID:100153723 GeneID:100156526 KEGG:ssc:100153723
KEGG:ssc:100156526 Uniprot:F1RQ93
Length = 272
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 55/166 (33%), Positives = 81/166 (48%)
Query: 30 NSKKYKKGIIYLSKVPPHMNVTQLTEFMSRFGEVGRVYLM---------------XXXXX 74
+ K+ GI+YL +PP + +S +GEVGRV+
Sbjct: 36 SKKRVVPGIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQPEDGFVRRKKKAAAASTTGG 95
Query: 75 XXXXXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSK-HYDFIWNFKYLPRFKWI 133
+TEGW+EF +NT + R+RS YD +WN KYL RF W
Sbjct: 96 KKRSKYSKDYTEGWVEFRDKRVAKRVAASLHNTPMGSRRRSPFRYD-LWNLKYLHRFTWS 154
Query: 134 HLNERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVADRIQKKNG 179
HL+E LA+E+Q RQ+LRAE+A+AKRE ++ +++ R +G
Sbjct: 155 HLSEHLAFERQVRRQRLRAEVAQAKRETDFYLRSVERGQRFLAADG 200
>WB|WBGene00019005 [details] [associations]
symbol:F57B10.8 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
eggNOG:NOG332037 GeneTree:ENSGT00390000002062 KO:K14785
GO:GO:0040035 EMBL:FO081416 OMA:PGFKWAD PIR:T32740
RefSeq:NP_491887.1 ProteinModelPortal:O44734 SMR:O44734
STRING:O44734 PaxDb:O44734 EnsemblMetazoa:F57B10.8 GeneID:172368
KEGG:cel:CELE_F57B10.8 UCSC:F57B10.8 CTD:172368 WormBase:F57B10.8
InParanoid:O44734 NextBio:875229 Uniprot:O44734
Length = 268
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 56/224 (25%), Positives = 112/224 (50%)
Query: 3 EDAGSSNESS-PAEEPGKYVLKPKDNTENSKKYKKGIIYLSKVPPHMNVTQLTEFMSRF- 60
++AG+ ++S EE ++ ++ E +K K G+++ S +PP NV ++ E+ +
Sbjct: 48 DEAGNLDDSEIKTEESEDDEMETFEDPEQKQK-KTGVVFFSTIPPKYNVVRMREYFEKRC 106
Query: 61 -GEVGRVYLMXXXXXXXXXXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSKHYD 119
G+VGR++L ++EGW+E +NT I + +
Sbjct: 107 PGQVGRIFLARNKHSKNPQYL---YSEGWMELKKKKIAKAIAEQIDNTPIGGKNKDPVSS 163
Query: 120 FIWNFKYLPRFKWIHLNERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVADRIQKKNG 179
+WN +YL FKW+HL E+L YEK+ ++++ E+A+A+R A +F ++ ++K
Sbjct: 164 MLWNIRYLSGFKWVHLMEQLQYEKEVEKRRMNVEVAQARRIAAHFEEQIEKGKHLRKLEA 223
Query: 180 KKKTNVPEQSSNKKNDGKGKQI-VKKSNTKPVE-DRKQFLTSLF 221
K + + +++ + K + VKK +K V + + + +F
Sbjct: 224 KVTASGGKWDKFQRDVQQKKVVKVKKERSKHVNTESSELMNMIF 267
>FB|FBgn0085521 [details] [associations]
symbol:CG40813 species:7227 "Drosophila melanogaster"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG332037
GeneTree:ENSGT00390000002062 EMBL:DS483593 RefSeq:NP_001104071.1
UniGene:Dm.36329 ProteinModelPortal:A8QI13 SMR:A8QI13
EnsemblMetazoa:FBtr0113934 GeneID:5740386 KEGG:dme:Dmel_CG40813
UCSC:CG40813-RA FlyBase:FBgn0085521 InParanoid:A8QI13
OrthoDB:EOG4NS1TQ PhylomeDB:A8QI13 NextBio:20891425 Uniprot:A8QI13
Length = 213
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 57/165 (34%), Positives = 84/165 (50%)
Query: 3 EDAGSSN-ESSPAEEPGKYVLKP-K---DNTENSKKYKKGIIYLSKVPPHMNVTQLTEFM 57
ED S+N E++P++E + L K +++ +KK KKGIIY+S +P HM +T+L E +
Sbjct: 31 EDGESANGEANPSDEGDEMELASFKAACSSSDPAKKIKKGIIYISNIPKHMTLTRLREIL 90
Query: 58 SRFGEVGRVYLMXXXXXXXXXXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSKH 117
+G +GR +L F EGW+EF NN QI R S
Sbjct: 91 GEYGGIGRAFLRSQSSKHHNIL----FAEGWVEFKSKHVAKQLVLLLNNKQISTRNNSPF 146
Query: 118 YDFIWNFKYLPRFKWIHLNERLAY----EKQAHRQKLRAEIAEAK 158
Y +W+ +YLPRFKW L E + + Q H + L+ + EAK
Sbjct: 147 YYSLWSMEYLPRFKWARLAELMNFVQVTNSQNHLEFLKKKAKEAK 191
>FB|FBgn0085693 [details] [associations]
symbol:CG41562 species:7227 "Drosophila melanogaster"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG332037
GeneTree:ENSGT00390000002062 OrthoDB:EOG4NS1TQ EMBL:BT125112
EMBL:BT128898 EMBL:DS483747 RefSeq:NP_001104090.1 UniGene:Dm.35205
SMR:A8QI32 EnsemblMetazoa:FBtr0114142 GeneID:5740411
KEGG:dme:Dmel_CG41562 UCSC:CG41562-RA FlyBase:FBgn0085693
InParanoid:A8QI32 OMA:SAYCEVG NextBio:20891450 Uniprot:A8QI32
Length = 213
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 57/165 (34%), Positives = 83/165 (50%)
Query: 3 EDAGSSN-ESSPAEEPGKYVLKP-K---DNTENSKKYKKGIIYLSKVPPHMNVTQLTEFM 57
ED S+N E++P++E + L K +++ +KK KKGIIY+S +P HM +T L E +
Sbjct: 31 EDGESANGEANPSDEGDEMELASFKAACSSSDPAKKIKKGIIYISNIPKHMTLTHLREIL 90
Query: 58 SRFGEVGRVYLMXXXXXXXXXXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSKH 117
+G +GR +L F EGW+EF NN QI R S
Sbjct: 91 GEYGGIGRAFLRSQSSKHHNIL----FAEGWVEFKSKHVAKQLVLLLNNKQISTRNNSPF 146
Query: 118 YDFIWNFKYLPRFKWIHLNERLAY----EKQAHRQKLRAEIAEAK 158
Y +W+ +YLPRFKW L E + + Q H + L+ + EAK
Sbjct: 147 YYSLWSMEYLPRFKWARLAELMNFVQVTNSQNHLEFLKKKAKEAK 191
>SGD|S000005337 [details] [associations]
symbol:ESF2 "Essential nucleolar protein involved in pre-18S
rRNA processing" species:4932 "Saccharomyces cerevisiae"
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA;IDA]
[GO:0001671 "ATPase activator activity" evidence=IDA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0034462
"small-subunit processome assembly" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR012677 PROSITE:PS50102 SGD:S000005337
GO:GO:0005737 GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330
EMBL:BK006947 GO:GO:0003723 eggNOG:NOG332037
GeneTree:ENSGT00390000002062 HOGENOM:HOG000242500 KO:K14785
GO:GO:0001671 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480 OMA:PGFKWAD
OrthoDB:EOG40VZZV EMBL:Z71669 PIR:S63385 RefSeq:NP_014452.1
ProteinModelPortal:P53743 SMR:P53743 DIP:DIP-6417N IntAct:P53743
MINT:MINT-618016 STRING:P53743 PaxDb:P53743 PeptideAtlas:P53743
EnsemblFungi:YNR054C GeneID:855790 KEGG:sce:YNR054C CYGD:YNR054c
NextBio:980277 Genevestigator:P53743 GermOnline:YNR054C
GO:GO:0034462 Uniprot:P53743
Length = 316
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 63/221 (28%), Positives = 102/221 (46%)
Query: 3 EDAGSSNESSPAEEPGKYVLKPKDNTENSKKYKKGIIYLSKVPPHMNVTQLTEFMSRFGE 62
E A S+ E + ++K K K+K G++Y S +PP+M ++ + ++RFGE
Sbjct: 82 EQASSTTSLDLKTEKLRQLVKSK--AAKKSKHKTGVVYFSSIPPYMKPAKMRQILTRFGE 139
Query: 63 VGRVYLMXXXXXXXXXXXXX------QFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSK 116
V R++L ++ EGW EF+ N I +K +
Sbjct: 140 VDRLFLKKEDDQKYKQRVKGGGNKKNKYEEGWAEFIRKRDAKLCAETLNGNIIGGKKGTF 199
Query: 117 HYDFIWNFKYLPRFKWIHLNERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVADRIQK 176
++D I N KYLP FKW L E++A E + KL EI++A + F N++ + IQ
Sbjct: 200 YHDDILNVKYLPGFKWADLTEQIARENDIRQAKLEMEISQANKLNAEFIRNVEQSKMIQN 259
Query: 177 -KNGKKKTNVPEQSSNKKNDGKGKQI-VKKSNTKPVEDRKQ 215
KN +K+ +S++ + KQ V+ S D KQ
Sbjct: 260 IKNSRKRAGKEGESADSHPHREFKQRRVETSRANAPSDIKQ 300
>UNIPROTKB|G4N0U5 [details] [associations]
symbol:MGG_05815 "Pre-rRNA-processing protein ESF2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 EMBL:CM001233 Gene3D:3.30.70.330
GO:GO:0003676 KO:K14785 RefSeq:XP_003712130.1
ProteinModelPortal:G4N0U5 EnsemblFungi:MGG_05815T0 GeneID:2684160
KEGG:mgr:MGG_05815 Uniprot:G4N0U5
Length = 330
Score = 217 (81.4 bits), Expect = 7.8e-18, P = 7.8e-18
Identities = 68/239 (28%), Positives = 108/239 (45%)
Query: 2 TEDAGSSNESSPAEEPGKYVLKPKDNTENSKKYKK-GIIYLSKVPPHMNVTQLTEFMSRF 60
++DAG + A P LK K+ K+ KK G++YLS++PP M ++L + +
Sbjct: 98 SKDAGPKLRTDAAN-P----LK-KNLVVTDKQIKKSGVVYLSRIPPFMKPSKLRSLLVPY 151
Query: 61 GEVGRVYLMXXXXXXXXXXXXXQ------FTEGWIEFLXXXXXXXXXXXYNNTQIDCRKR 114
G++ R++L F +GW+EF+ N I +K
Sbjct: 152 GKINRIFLSPEDPEARKRRLKAGGNKKRCFVDGWVEFMDKKDAKAVAEVLNGQTIGGKKG 211
Query: 115 SKHYDFIWNFKYLPRFKWIHLNERLAYEKQAHRQKLRAEIAEAKREALYFSNNLDVADRI 174
S + D IW YL FKW +L E++A E ++RAEIA + +E F + A +
Sbjct: 212 SYYRDDIWTLLYLKGFKWHNLMEQIAAENLERANRMRAEIARSTKENKEFVRQAERAKVL 271
Query: 175 QKKNGKKKTNVP-EQSSNKKNDG--------KGKQI---VKKSNTKPVEDRKQFLTSLF 221
+ KKK E+ N +NDG K +Q+ KK T+P ++ L +LF
Sbjct: 272 EGIQSKKKAKGQGEEVENAQNDGGAVKSRSMKFEQVHVASKKETTEPPAQAQKTLRTLF 330
>FB|FBgn0030524 [details] [associations]
symbol:CG10993 species:7227 "Drosophila melanogaster"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 SMART:SM00360 GO:GO:0000166 EMBL:AE014298
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG332037
GeneTree:ENSGT00390000002062 OrthoDB:EOG4NS1TQ EMBL:AY118812
EMBL:BT022760 RefSeq:NP_572923.1 UniGene:Dm.19152 SMR:Q9VY84
EnsemblMetazoa:FBtr0073837 GeneID:32344 KEGG:dme:Dmel_CG10993
UCSC:CG10993-RA FlyBase:FBgn0030524 InParanoid:Q9VY84
GenomeRNAi:32344 NextBio:778037 Uniprot:Q9VY84
Length = 210
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 44/129 (34%), Positives = 62/129 (48%)
Query: 35 KKGIIYLSKVPPHMNVTQLTEFMSRFGEVGRVYLMXXXXXXXXXXXXXQFTEGWIEFLXX 94
KKG+IY+S +P HM +T+L E + +G +GR +L F EGW+EF
Sbjct: 63 KKGVIYISNLPKHMTLTRLREILGEYGAIGRAFLRSQKLSRKPHNFL--FAEGWVEFKSK 120
Query: 95 XXXXXXXXXYNNTQIDCRKRSKHYDFIWNFKYLPRFKWIHLNERL----AYEKQAHRQKL 150
N QI K+S Y +W +YLPRFKW LNE + Q H + L
Sbjct: 121 RVAKQIVPLLNYKQISTHKKSPFYYSLWIMEYLPRFKWARLNELMNIVPVTNSQNHLKFL 180
Query: 151 RAEIAEAKR 159
+ +AK+
Sbjct: 181 NKKAKKAKK 189
>ASPGD|ASPL0000064131 [details] [associations]
symbol:AN7305 species:162425 "Emericella nidulans"
[GO:0034462 "small-subunit processome assembly" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0001671 "ATPase activator activity"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] PROSITE:PS50102 GO:GO:0005730 GO:GO:0003723
eggNOG:NOG332037 KO:K14785 EMBL:BN001304 EMBL:AACD01000127
GO:GO:0006364 RefSeq:XP_680574.1 STRING:Q5AWM5
EnsemblFungi:CADANIAT00000132 GeneID:2870178 KEGG:ani:AN7305.2
HOGENOM:HOG000048364 OMA:YHDDVWN OrthoDB:EOG40VZZV Uniprot:Q5AWM5
Length = 346
Score = 197 (74.4 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 52/190 (27%), Positives = 80/190 (42%)
Query: 23 KPKDNTENS--KKYKKGIIYLSKVPPHMNVTQLTEFMSR--FGEVGRVYLMXX----XXX 74
KP D +N KK K G++Y S +PP++ L + F + +V+L
Sbjct: 120 KPLDKLKNKPPKKNKTGVVYFSSLPPYLKPFALKSLLETRGFKPITKVFLTPAVRPPSAP 179
Query: 75 XXXXXXXXQFTEGWIEFLXXXXXXXXXXXYNNTQIDCRKRSKHYDFIWNFKYLPRFKWIH 134
+T+GW+EF N T + +K ++D +WN KYL FKW
Sbjct: 180 RRRSNKRKTYTDGWVEFASKKTAKICAETLNATIVGGKKGGWYHDDVWNMKYLKGFKWAD 239
Query: 135 LNERLAYEKQAHRQKLRAEIAEAKREALYFSNNLD---VADRIQKKNGKKKTNVPEQSSN 191
L E E+ K R E A A++E F + + + IQKKN +K+
Sbjct: 240 LMETQERERSEREAKRRIEDARARKEEKVFLQGYEKGKMLEGIQKKNEEKRRKKMADKDG 299
Query: 192 KKNDGKGKQI 201
+ GK + I
Sbjct: 300 HGDQGKEQAI 309
>FB|FBgn0052706 [details] [associations]
symbol:CG32706 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
SMART:SM00360 GO:GO:0000166 EMBL:AE014298 GO:GO:0042742
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00390000002062
RefSeq:NP_727307.1 UniGene:Dm.23781 ProteinModelPortal:Q8IRM9
SMR:Q8IRM9 IntAct:Q8IRM9 MINT:MINT-760119 PRIDE:Q8IRM9
EnsemblMetazoa:FBtr0071287 GeneID:318160 KEGG:dme:Dmel_CG32706
UCSC:CG32706-RA FlyBase:FBgn0052706 InParanoid:Q8IRM9
OrthoDB:EOG4PVMGW PhylomeDB:Q8IRM9 NextBio:845019
ArrayExpress:Q8IRM9 Uniprot:Q8IRM9
Length = 230
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 50/181 (27%), Positives = 85/181 (46%)
Query: 29 ENSKKYKKGIIYLSKVPPHMNVTQLTEFMSRFGEVGRVYLMXXXXXXXXXXXXXQFTEGW 88
+ K +K G+I +S +P M+ L E M+ VGRVY+ + +GW
Sbjct: 53 KREKMHKVGVILISNIPKDMDGDCLKEIMNLHSVVGRVYVQPETLSSFKTKKNMR--KGW 110
Query: 89 IEFLXXXXXXXXXXXYNNTQIDCRKRSKHYDFIWNFKYLPRFKWIHLNERLAYEKQAHRQ 148
+EF+ NN I K S+ +W K+LPRFKW +L +R+ YE +
Sbjct: 111 VEFISKSGAKKIALELNNKPITDGKSSRFRGLLWKMKFLPRFKWYYLTDRMDYELAVCKV 170
Query: 149 KLRAEIAEAKREALYFSNNLDVADRIQKKNGK-KKTNVPEQSSN---KKNDGKGKQIVKK 204
++ ++ A + LY + ++ + KK K KK + +++ KK + K++ KK
Sbjct: 171 RVWSQ-ARKRATFLYDPDQMEYFKKQVKKMKKVKKAEMATRNAEMAAKKAEMAAKKL-KK 228
Query: 205 S 205
S
Sbjct: 229 S 229
>FB|FBgn0030085 [details] [associations]
symbol:CG6999 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 EMBL:AE014298 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000002062 GO:GO:0000381 OrthoDB:EOG4PVMGW
EMBL:AY752552 EMBL:AY752553 EMBL:AY752554 EMBL:AY752555
EMBL:AY752558 RefSeq:NP_572523.1 UniGene:Dm.11688 SMR:Q9W393
IntAct:Q9W393 MINT:MINT-846774 EnsemblMetazoa:FBtr0071288
GeneID:31837 KEGG:dme:Dmel_CG6999 UCSC:CG6999-RA
FlyBase:FBgn0030085 InParanoid:Q9W393 OMA:MISDIMQ GenomeRNAi:31837
NextBio:775568 Uniprot:Q9W393
Length = 233
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 47/166 (28%), Positives = 71/166 (42%)
Query: 29 ENSKKYKKGIIYLSKVPPHMNVTQLTEFMSRFGEVGRVYLMXXXXXXXXXXXXXQFTEGW 88
+ K +K G+I +S +P M+ L E M+ VGRVY+ + +GW
Sbjct: 53 KREKMHKVGVILISNIPKDMDGDCLKEIMNLHSVVGRVYVQPETLSSFKTKKNMR--KGW 110
Query: 89 IEFLXXXXXXXXXXXYNNTQIDCRKRSKHYDFIWNFKYLPRFKWIHLNERLAYEKQAHRQ 148
+EF+ NN I K S+ +W K+LPRFKW +L +R+ YE
Sbjct: 111 VEFISKSGAKKIALELNNKPITDGKSSRFRGLLWKMKFLPRFKWYYLTDRMDYELAVC-- 168
Query: 149 KLRAEIAEAKREALYFSNNLDVADRIQKKNGKKKTNVPEQSSNKKN 194
K+R KR ++ + + Q K KK V E +N
Sbjct: 169 KVRVWSQARKRATFWYDPDQMEYFKKQVKKMKKMKKVKEAEMATRN 214
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 222 198 0.00083 111 3 11 23 0.39 33
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 605 (64 KB)
Total size of DFA: 172 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.92u 0.09s 21.01t Elapsed: 00:00:18
Total cpu time: 20.93u 0.09s 21.02t Elapsed: 00:00:21
Start: Thu Aug 15 14:02:06 2013 End: Thu Aug 15 14:02:27 2013