BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3862
(671 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2A7R|A Chain A, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
pdb|2A7R|B Chain B, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
pdb|2A7R|C Chain C, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
pdb|2A7R|D Chain D, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 (Gmpr2)
Length = 366
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/268 (58%), Positives = 188/268 (70%), Gaps = 53/268 (19%)
Query: 13 IINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEM 72
I ND+KLDFKDV+LRPKRSTLKSRSEVD+TR+F+FRNS +TY GVPIIAANMDTVGTFEM
Sbjct: 22 IDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEM 81
Query: 73 AKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEI 132
AK L K LFT +HK+Y+L +W+ FA QNPD ++H+A SSG + D L++IL A+P++
Sbjct: 82 AKVLCKFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQV 141
Query: 133 EYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPG 192
+YICLDVANGY++ FV+FV+ +R+ +P+H I+AGNVVTGEMVEELILSGAD+IKVGIGPG
Sbjct: 142 KYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPG 201
Query: 193 SVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRL 252
SVCTTR K
Sbjct: 202 SVCTTRKK---------------------------------------------------- 209
Query: 253 KTGVGYPQFSAVLECADAAHGLGGHIIS 280
TGVGYPQ SAV+ECADAAHGL GHIIS
Sbjct: 210 -TGVGYPQLSAVMECADAAHGLKGHIIS 236
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/127 (74%), Positives = 110/127 (86%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGGC+ PGDVAKA GAGADFVMLGGM AGH +SGGELIE+DGKK KLFYGMSS AM
Sbjct: 235 ISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMK 294
Query: 503 KHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRC 562
K+AGGVAEYRA+EGKTV+VP++GDV T++DILGG+RS CTYVGA+KLKEL RR TFIR
Sbjct: 295 KYAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRV 354
Query: 563 TAQLNNV 569
T Q+N +
Sbjct: 355 TQQVNPI 361
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 87/106 (82%)
Query: 289 IINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEM 348
I ND+KLDFKDV+LRPKRSTLKSRSEVD+TR+F+FRNS +TY GVPIIAANMDTVGTFEM
Sbjct: 22 IDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEM 81
Query: 349 AKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGD 394
AK L K LFT +HK+Y+L +W+ FA QNPD ++H+A T D
Sbjct: 82 AKVLCKFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSD 127
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 50/58 (86%)
Query: 612 AAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNMY 669
A+EGKTV+VP++GDV T++DILGG+RS CTYVGA+KLKEL RR TFIR T Q+N ++
Sbjct: 305 ASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIF 362
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 6/68 (8%)
Query: 384 VADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIE----YMFFPLVGD--MN 437
++DGGC+ PGDVAKA GAGADFVMLGGM AGH +SGGEL + +F+ + + M
Sbjct: 235 ISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMK 294
Query: 438 SYLGGVVD 445
Y GGV +
Sbjct: 295 KYAGGVAE 302
>pdb|2BZN|A Chain A, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|B Chain B, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|C Chain C, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|D Chain D, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|E Chain E, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|F Chain F, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|G Chain G, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2BZN|H Chain H, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp
pdb|2C6Q|A Chain A, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|B Chain B, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|C Chain C, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|D Chain D, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|E Chain E, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|F Chain F, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|G Chain G, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
pdb|2C6Q|H Chain H, Crystal Structure Of Human Guanosine Monophosphate
Reductase 2 Gmpr2 In Complex With Imp And Nadph
Length = 351
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 152/262 (58%), Positives = 183/262 (69%), Gaps = 53/262 (20%)
Query: 19 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 78
LDFKDV+LRPKRSTLKSRSEVD+TR+F+FRNS +TY GVPIIAANMDTVGTFEMAK L K
Sbjct: 20 LDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCK 79
Query: 79 HGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLD 138
LFT +HK+Y+L +W+ FA QNPD ++H+A SSG + D L++IL A+P+++YICLD
Sbjct: 80 FSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLD 139
Query: 139 VANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTR 198
VANGY++ FV+FV+ +R+ +P+H I+AGNVVTGEMVEELILSGAD+IKVGIGPGSVCTTR
Sbjct: 140 VANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTR 199
Query: 199 LKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGY 258
K TGVGY
Sbjct: 200 KK-----------------------------------------------------TGVGY 206
Query: 259 PQFSAVLECADAAHGLGGHIIS 280
PQ SAV+ECADAAHGL GHIIS
Sbjct: 207 PQLSAVMECADAAHGLKGHIIS 228
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGGC+ PGDVAKA GAGADFVMLGGM AGH +SGGELIE+DGKK KLFYGMSS AM
Sbjct: 227 ISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMK 286
Query: 503 KHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRC 562
K+AGGVAEYRA+EGKTV+VP++GDV T++DILGG+RS CTYVGA+KLKEL RR TFIR
Sbjct: 287 KYAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRV 346
Query: 563 TAQLN 567
T Q+N
Sbjct: 347 TQQVN 351
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 82/100 (82%)
Query: 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 354
LDFKDV+LRPKRSTLKSRSEVD+TR+F+FRNS +TY GVPIIAANMDTVGTFEMAK L K
Sbjct: 20 LDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCK 79
Query: 355 HGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGD 394
LFT +HK+Y+L +W+ FA QNPD ++H+A T D
Sbjct: 80 FSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSD 119
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 612 AAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLN 666
A+EGKTV+VP++GDV T++DILGG+RS CTYVGA+KLKEL RR TFIR T Q+N
Sbjct: 297 ASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVN 351
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 6/68 (8%)
Query: 384 VADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIE----YMFFPLVGD--MN 437
++DGGC+ PGDVAKA GAGADFVMLGGM AGH +SGGEL + +F+ + + M
Sbjct: 227 ISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMK 286
Query: 438 SYLGGVVD 445
Y GGV +
Sbjct: 287 KYAGGVAE 294
>pdb|2BLE|A Chain A, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|A Chain A, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|B Chain B, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|C Chain C, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
pdb|2BWG|D Chain D, Structure Of Human Guanosine Monophosphate Reductase Gmpr1
In Complex With Gmp
Length = 367
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 146/269 (54%), Positives = 185/269 (68%), Gaps = 53/269 (19%)
Query: 12 KIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFE 71
+I D+KLDFKDV+LRPKRS+LKSR+EVD+ RTFTFRNS +TY G+PII ANMDTVGTFE
Sbjct: 25 RIDADLKLDFKDVLLRPKRSSLKSRAEVDLERTFTFRNSKQTYSGIPIIVANMDTVGTFE 84
Query: 72 MAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPE 131
MA +++H +FT IHK+Y+L++WK FA +P+ +++VAVSSG DL + IL A+P+
Sbjct: 85 MAAVMSQHSMFTAIHKHYSLDDWKLFATNHPECLQNVAVSSGSGQNDLEKMTSILEAVPQ 144
Query: 132 IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP 191
+++ICLDVANGY++ FV+FV+ +R +P+H I+AGNVVTGEMVEELILSGAD+IKVG+GP
Sbjct: 145 VKFICLDVANGYSEHFVEFVKLVRAKFPEHTIMAGNVVTGEMVEELILSGADIIKVGVGP 204
Query: 192 GSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTR 251
GSVCTTR K
Sbjct: 205 GSVCTTRTK--------------------------------------------------- 213
Query: 252 LKTGVGYPQFSAVLECADAAHGLGGHIIS 280
TGVGYPQ SAV+ECAD+AHGL GHIIS
Sbjct: 214 --TGVGYPQLSAVIECADSAHGLKGHIIS 240
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 97/127 (76%), Positives = 112/127 (88%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGGCT PGDVAKA GAGADFVMLGGMF+GH + GE+IE++G+K+KLFYGMSS TAM+
Sbjct: 239 ISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGRKLKLFYGMSSDTAMN 298
Query: 503 KHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRC 562
KHAGGVAEYRA+EGKTV+VPY+GDV +T+ DILGGLRS CTYVGA+KLKEL RRATFIR
Sbjct: 299 KHAGGVAEYRASEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRV 358
Query: 563 TAQLNNV 569
T Q N V
Sbjct: 359 TQQHNTV 365
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 88/110 (80%)
Query: 288 KIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFE 347
+I D+KLDFKDV+LRPKRS+LKSR+EVD+ RTFTFRNS +TY G+PII ANMDTVGTFE
Sbjct: 25 RIDADLKLDFKDVLLRPKRSSLKSRAEVDLERTFTFRNSKQTYSGIPIIVANMDTVGTFE 84
Query: 348 MAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAK 397
MA +++H +FT IHK+Y+L++WK FA +P+ +++VA + D+ K
Sbjct: 85 MAAVMSQHSMFTAIHKHYSLDDWKLFATNHPECLQNVAVSSGSGQNDLEK 134
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 612 AAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNMY 669
A+EGKTV+VPY+GDV +T+ DILGGLRS CTYVGA+KLKEL RRATFIR T Q N ++
Sbjct: 309 ASEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQHNTVF 366
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 6/68 (8%)
Query: 384 VADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIE----YMFFPLVGD--MN 437
++DGGCT PGDVAKA GAGADFVMLGGMF+GH + GE+ +F+ + D MN
Sbjct: 239 ISDGGCTCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVIERNGRKLKLFYGMSSDTAMN 298
Query: 438 SYLGGVVD 445
+ GGV +
Sbjct: 299 KHAGGVAE 306
>pdb|3R2G|A Chain A, Crystal Structure Of Inosine 5' Monophosphate
Dehydrogenase From Legionella Pneumophila
Length = 361
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 150/330 (45%), Gaps = 62/330 (18%)
Query: 289 IINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEM 348
++ D + F DV+L P + +SR V+ T T GK +P+I+ANMDT+ M
Sbjct: 2 VMTDQAITFDDVLLVPSYNHHESRRVVETTSTDRL---GKLTLNLPVISANMDTITESNM 58
Query: 349 AKHLAKHGLFTTIHKYYTLEE-WKAFAVQNPDVIKHVADGGCTSPGDVAKAMG---AGAD 404
A + G +H++ T+EE + F V V GCT ++ +A AGAD
Sbjct: 59 ANFMHSKGAMGALHRFMTIEENIQEFKKCKGPVFVSV---GCTE-NELQRAEALRDAGAD 114
Query: 405 FVMLGGMFAGHDQSGGELTNIEYMFFP---LVGDMNSYLGG------------------- 442
F + A G L ++ + + G++ +Y G
Sbjct: 115 FFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGS 174
Query: 443 ----------------------------VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGH 474
V DGG + GD+ KA+ GADFVM+GGM AG
Sbjct: 175 VCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGIKTSGDIVKALAFGADFVMIGGMLAGS 234
Query: 475 DQSGGELIEKD-GKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQD 533
+ GE+ +KD G KVK + GM+S A + G + E++ AEG +VP++ + + + D
Sbjct: 235 APTPGEVFQKDDGSKVKRYRGMASREAQEAFLGQMHEWKTAEGVATEVPFKENPDGIIAD 294
Query: 534 ILGGLRSACTYVGASKLKELPRRATFIRCT 563
I+GGLRS TY GA + EL R+ ++ T
Sbjct: 295 IIGGLRSGLTYAGADSISELQRKLNYVIVT 324
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 116/237 (48%), Gaps = 18/237 (7%)
Query: 13 IINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEM 72
++ D + F DV+L P + +SR V+ T T GK +P+I+ANMDT+ M
Sbjct: 2 VMTDQAITFDDVLLVPSYNHHESRRVVETTSTDRL---GKLTLNLPVISANMDTITESNM 58
Query: 73 AKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIK-HVAVSSGISAKDLAGLKEILAALPE 131
A + G +H++ T+EE +Q K V VS G + +L + + A
Sbjct: 59 ANFMHSKGAMGALHRFMTIEE----NIQEFKKCKGPVFVSVGCTENELQRAEALRDA--G 112
Query: 132 IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP 191
++ C+DVA+ + + ++ +R++ I+AGNV T + L GAD+IK GIG
Sbjct: 113 ADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGG 172
Query: 192 GSVCTTRLKNKTSDFFLIQFYSC-------IPQAGNVVTGEMVEELILSGADVIKVG 241
GSVC+TR+K L C + G +G++V+ L GAD + +G
Sbjct: 173 GSVCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGIKTSGDIVKALAF-GADFVMIG 228
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 613 AEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCT 662
AEG +VP++ + + + DI+GGLRS TY GA + EL R+ ++ T
Sbjct: 275 AEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQRKLNYVIVT 324
>pdb|1YPF|A Chain A, Crystal Structure Of Guac (Ba5705) From Bacillus Anthracis
At 1.8 A Resolution
pdb|1YPF|B Chain B, Crystal Structure Of Guac (Ba5705) From Bacillus Anthracis
At 1.8 A Resolution
pdb|2A1Y|A Chain A, Crystal Structure Of Guac-Gmp Complex From Bacillus
Anthracis At 2.26 A Resolution
Length = 336
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 107/184 (58%), Gaps = 10/184 (5%)
Query: 19 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 78
D++D+ L P + + SRSE D T T GK +P++ ANM T+ +A +LA+
Sbjct: 14 FDYEDIQLIPAKCIVNSRSECDTTVTL-----GKHKFKLPVVPANMQTIIDERIATYLAE 68
Query: 79 HGLFTTIHKYYTLEEWKAFA--VQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYIC 136
+ F +H++ E+ +F +Q+ +I ++S G+ + ++++ A EYI
Sbjct: 69 NNYFYIMHRFQP-EKRISFIRDMQSRGLI--ASISVGVKEDEYEFVQQLAAEHLTPEYIT 125
Query: 137 LDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCT 196
+D+A+G++ ++ ++ I++ P+ +IAGNV T E V EL +GAD KVGIGPG VC
Sbjct: 126 IDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCI 185
Query: 197 TRLK 200
T++K
Sbjct: 186 TKIK 189
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 137/326 (42%), Gaps = 89/326 (27%)
Query: 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 354
D++D+ L P + + SRSE D T T GK +P++ ANM T+ +A +LA+
Sbjct: 14 FDYEDIQLIPAKCIVNSRSECDTTVTL-----GKHKFKLPVVPANMQTIIDERIATYLAE 68
Query: 355 HGLFTTIHKY-----------------------------YTLEEWKAFAVQNPDVI---- 381
+ F +H++ Y + A P+ I
Sbjct: 69 NNYFYIMHRFQPEKRISFIRDMQSRGLIASISVGVKEDEYEFVQQLAAEHLTPEYITIDI 128
Query: 382 ----------------KHVAD-----GGCTSPGDVAKAMGAGADFVMLG---------GM 411
KH+ + G +P V + AGAD +G +
Sbjct: 129 AHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKI 188
Query: 412 FAGHDQSGGELTNIEY----MFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVML 467
G G +L + + P++ D GG+ + GDVAK++ GA VM+
Sbjct: 189 KTGFGTGGWQLAALRWCAKAASKPIIAD-----GGI-----RTNGDVAKSIRFGATMVMI 238
Query: 468 GGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDV 527
G +FAGH++S GE IEKDGK K ++G +S E + EGK + V ++G +
Sbjct: 239 GSLFAGHEESPGETIEKDGKLYKEYFGSASEFQK-------GEKKNVEGKKMFVEHKGSL 291
Query: 528 NDTVQDILGGLRSACTYVGASKLKEL 553
DT+ ++ L+S+ +Y G +KL +
Sbjct: 292 EDTLIEMEQDLQSSISYAGGTKLDSI 317
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 614 EGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKEL 652
EGK + V ++G + DT+ ++ L+S+ +Y G +KL +
Sbjct: 279 EGKKMFVEHKGSLEDTLIEMEQDLQSSISYAGGTKLDSI 317
>pdb|1VRD|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
A Resolution
pdb|1VRD|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
A Resolution
Length = 494
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 120/274 (43%), Gaps = 38/274 (13%)
Query: 316 DITRTFTFRNSGKTYQGVPIIAANMDTVG-TFEMAKHLAKHGLFTTI------HKYYTLE 368
DI N+ + +G ++ A + T T E + L K G+ + H +E
Sbjct: 208 DIMSVIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIE 267
Query: 369 EWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLG-------------GMFAGH 415
+ PD+ V G +P + AGAD V +G G+
Sbjct: 268 TLEMIKADYPDL--PVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQ 325
Query: 416 DQSGGELTNIEYMF-FPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGH 474
+ E + + + P++ D GG GD+ KA+ AGA+ VM+G +FAG
Sbjct: 326 LTAVMECSEVARKYDVPIIAD----------GGIRYSGDIVKALAAGAESVMVGSIFAGT 375
Query: 475 DQSGGELIEKDGKKVKLFYGMSSTTAM-----DKHAGGVAEYRAAEGKTVQVPYRGDVND 529
+++ GE I G+K K + GM S AM D++ EG VPY+G V D
Sbjct: 376 EEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGIEGMVPYKGTVKD 435
Query: 530 TVQDILGGLRSACTYVGASKLKELPRRATFIRCT 563
V ++GGLRS Y+GA +KEL +A F++ T
Sbjct: 436 VVHQLVGGLRSGMGYIGARTIKELQEKAVFVKIT 469
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 170 TGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEE 229
T E VE+L+ +G DVI + G +R +T + + AGNV T E E
Sbjct: 238 TMERVEKLVKAGVDVIVIDTAHGH---SRRVIETLEMIKADYPDLPVVAGNVATPEGTEA 294
Query: 230 LILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAH 272
LI +GAD +KVG+GPGS+CTTR+ GVG PQ +AV+EC++ A
Sbjct: 295 LIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVAR 337
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 132 IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP 191
++ I +D A+G+++ ++ + I+ YP ++AGNV T E E LI +GAD +KVG+GP
Sbjct: 250 VDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGP 309
Query: 192 GSVCTTRL 199
GS+CTTR+
Sbjct: 310 GSICTTRV 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 609 NNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCT 662
N EG VPY+G V D V ++GGLRS Y+GA +KEL +A F++ T
Sbjct: 416 NKFVPEGIEGMVPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQEKAVFVKIT 469
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 19 LDFKDVMLRPKRS-TLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLA 77
L F DV+L P+ S L ++D T R + +P+++A MDTV +AK LA
Sbjct: 17 LTFDDVLLVPQYSEVLPKDVKIDTRLTRQIRIN------IPLVSAAMDTVTEAALAKALA 70
Query: 78 KHGLFTTIHKYYTLEE 93
+ G IHK T +E
Sbjct: 71 REGGIGIIHKNLTPDE 86
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 295 LDFKDVMLRPKRS-TLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLA 353
L F DV+L P+ S L ++D T R + +P+++A MDTV +AK LA
Sbjct: 17 LTFDDVLLVPQYSEVLPKDVKIDTRLTRQIRIN------IPLVSAAMDTVTEAALAKALA 70
Query: 354 KHGLFTTIHKYYTLEE 369
+ G IHK T +E
Sbjct: 71 REGGIGIIHKNLTPDE 86
>pdb|4FO4|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp And
Mycophenolic Acid
pdb|4FO4|B Chain B, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp And
Mycophenolic Acid
pdb|4HLV|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, In Complex With Nad And Imp
pdb|4HLV|B Chain B, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, In Complex With Nad And Imp
pdb|4IX2|A Chain A, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
pdb|4IX2|B Chain B, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
pdb|4IX2|C Chain C, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
pdb|4IX2|D Chain D, Inosine 5'-monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant, Complexed With Imp
Length = 366
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 100/183 (54%), Gaps = 10/183 (5%)
Query: 19 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 78
L F DV+L P ST+ + D+ RT +N +P+++A+MDTV +A LA+
Sbjct: 14 LTFDDVLLVPAHSTVLPNT-ADL-RTRLTKN---IALNIPMVSASMDTVTEARLAIALAQ 68
Query: 79 HGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPE--IEYIC 136
G IHK ++E+ +A V + + V + + A G +E + AL E ++ +
Sbjct: 69 EGGIGFIHKNMSIEQ-QAAQVHQVKISGGLRVGAAVGAAP--GNEERVKALVEAGVDVLL 125
Query: 137 LDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCT 196
+D ++G+++ + +R R YP II GNV T E LI +G +KVGIGPGS+CT
Sbjct: 126 IDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICT 185
Query: 197 TRL 199
TR+
Sbjct: 186 TRI 188
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG GD++KA+ AGA VM+G MFAG +++ GE+I G+ K + GM S AM
Sbjct: 215 IADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMS 274
Query: 503 KHAG-------GVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 555
K + A+ EG ++ Y+G + + + +GGLRS G++ +++L
Sbjct: 275 KGSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRT 334
Query: 556 RATFIRCT 563
+A F+R +
Sbjct: 335 KAQFVRIS 342
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 152/396 (38%), Gaps = 95/396 (23%)
Query: 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 354
L F DV+L P ST+ + D+ RT +N +P+++A+MDTV +A LA+
Sbjct: 14 LTFDDVLLVPAHSTVLPNT-ADL-RTRLTKN---IALNIPMVSASMDTVTEARLAIALAQ 68
Query: 355 HGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGC--TSPGD---VAKAMGAGADFVMLG 409
G IHK ++E+ +A V + + G +PG+ V + AG D +++
Sbjct: 69 EGGIGFIHKNMSIEQ-QAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLID 127
Query: 410 GMFAGHDQSGGELTNIE-----YMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADF 464
+ H S G L I Y ++G G+VA A GA A
Sbjct: 128 ---SSHGHSEGVLQRIRETRAAYPHLEIIG-----------------GNVATAEGARA-- 165
Query: 465 VMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSST--------------TAMDKHAGGVAE 510
LIE VK+ G S TA+ AG E
Sbjct: 166 ----------------LIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE 209
Query: 511 YRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGA--SKLKELPRRATFIRCTAQLNN 568
Y + + GD++ + ++C VG+ + +E P +
Sbjct: 210 YGIPVIADGGIRFSGDISKAI-----AAGASCVMVGSMFAGTEEAPGEVILYQG------ 258
Query: 569 VNDTVQDILGGLRSACTYVGASKLKELPRRAT--FIRCTAQLNNVAAEGKTVQVPYRGDV 626
RS Y G L + + ++ + + + + EG ++ Y+G +
Sbjct: 259 ------------RSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRIAYKGHL 306
Query: 627 NDTVQDILGGLRSACTYVGASKLKELPRRATFIRCT 662
+ + +GGLRS G++ +++L +A F+R +
Sbjct: 307 KEIIHQQMGGLRSCMGLTGSATVEDLRTKAQFVRIS 342
>pdb|3KHJ|A Chain A, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|B Chain B, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|C Chain C, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|D Chain D, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|E Chain E, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|F Chain F, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|G Chain G, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
pdb|3KHJ|H Chain H, C. Parvum Inosine Monophosphate Dehydrogenase Bound By
Inhibitor C64
Length = 361
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 120/266 (45%), Gaps = 70/266 (26%)
Query: 19 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 78
L F+D++L P S + R EV + T S K +P+I++ MDTV MA +A+
Sbjct: 13 LTFEDILLVPNYSEVLPR-EVSLETKLTKNVSLK----IPLISSAMDTVTEHLMAVGMAR 67
Query: 79 HGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEI----LAALPEIEY 134
G IHK +E Q +V+K V S G+ G+ EI L ++
Sbjct: 68 LGGIGIIHKNMDMES------QVNEVLK-VKNSGGLRVGAAIGVNEIERAKLLVEAGVDV 120
Query: 135 ICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSV 194
I LD A+G++ ++ +R ++E+ K I DVI
Sbjct: 121 IVLDSAHGHS---LNIIRTLKEIKSKMNI-------------------DVI--------- 149
Query: 195 CTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKT 254
GNVVT E +ELI +GAD IKVGIGPGS+CTTR+
Sbjct: 150 -----------------------VGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVA 186
Query: 255 GVGYPQFSAVLECADAAHGLGGHIIS 280
GVG PQ +A+ +C+ A G II+
Sbjct: 187 GVGVPQITAIEKCSSVASKFGIPIIA 212
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 154/376 (40%), Gaps = 58/376 (15%)
Query: 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 354
L F+D++L P S + R EV + T S K +P+I++ MDTV MA +A+
Sbjct: 13 LTFEDILLVPNYSEVLPR-EVSLETKLTKNVSLK----IPLISSAMDTVTEHLMAVGMAR 67
Query: 355 HGLFTTIHKYYTLEEW--KAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMF 412
G IHK +E + V+N ++ A G + AG D ++L
Sbjct: 68 LGGIGIIHKNMDMESQVNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVL---- 123
Query: 413 AGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFA 472
D + G NI + MN +D V++G +
Sbjct: 124 ---DSAHGHSLNIIRTLKEIKSKMN------ID-------------------VIVGNVVT 155
Query: 473 GHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAG-GVAEYRAAEGKTVQVPYRGDVNDTV 531
+++ ELIE +K+ G S AG GV + A E K V + + +
Sbjct: 156 --EEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIE-KCSSVASKFGI-PII 211
Query: 532 QDILGGLRSA-----CTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDILGGLRSACTY 586
D GG+R + VGAS + A + + DTV G+ S
Sbjct: 212 AD--GGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGS---- 265
Query: 587 VGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGA 646
VGA K R + + N + EG +V Y+G++ V ++GGLRS Y+G+
Sbjct: 266 VGAMKSGSGDR---YFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGS 322
Query: 647 SKLKELPRRATFIRCT 662
+ ++EL ++++++ T
Sbjct: 323 ASIEELWKKSSYVEIT 338
>pdb|4FEZ|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant
pdb|4FEZ|B Chain B, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae, Deletion Mutant
Length = 388
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 28/203 (13%)
Query: 19 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 78
L F DV+L P ST+ + T R + +P+++A+MDTV +A LA+
Sbjct: 14 LTFDDVLLVPAHSTV-----LPNTADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQ 68
Query: 79 HGLFTTIHKYYTLEEWKAFAVQNPDVIK-------HVAVSSGISAKD------------- 118
G IHK ++E+ +A V + + H A S + KD
Sbjct: 69 EGGIGFIHKNMSIEQ-QAAQVHQVKIFESGGAKDFHKAESKPNACKDEQGRLRVGAAVGA 127
Query: 119 LAGLKEILAALPE--IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEE 176
G +E + AL E ++ + +D ++G+++ + +R R YP II GNV T E
Sbjct: 128 APGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARA 187
Query: 177 LILSGADVIKVGIGPGSVCTTRL 199
LI +G +KVGIGPGS+CTTR+
Sbjct: 188 LIEAGVSAVKVGIGPGSICTTRI 210
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG GD++KA+ AGA VM+G MFAG +++ GE+I G+ K + GM S AM
Sbjct: 237 IADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMS 296
Query: 503 K-------HAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 555
K A+ EG ++ Y+G + + + +GGLRS G++ +++L
Sbjct: 297 KGSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRT 356
Query: 556 RATFIRCT 563
+A F+R +
Sbjct: 357 KAQFVRIS 364
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 354
L F DV+L P ST+ + T R + +P+++A+MDTV +A LA+
Sbjct: 14 LTFDDVLLVPAHSTV-----LPNTADLRTRLTKNIALNIPMVSASMDTVTEARLAIALAQ 68
Query: 355 HGLFTTIHKYYTLEEWKA 372
G IHK ++E+ A
Sbjct: 69 EGGIGFIHKNMSIEQQAA 86
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 581 RSACTYVGASKLKELPRRAT--FIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLR 638
RS Y G L + + ++ + + + + EG ++ Y+G + + + +GGLR
Sbjct: 281 RSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLR 340
Query: 639 SACTYVGASKLKELPRRATFIRCT 662
S G++ +++L +A F+R +
Sbjct: 341 SCMGLTGSATVEDLRTKAQFVRIS 364
>pdb|1EEP|A Chain A, 2.4 A Resolution Crystal Structure Of Borrelia Burgdorferi
Inosine 5'- Monphosphate Dehydrogenase In Complex With A
Sulfate Ion
pdb|1EEP|B Chain B, 2.4 A Resolution Crystal Structure Of Borrelia Burgdorferi
Inosine 5'- Monphosphate Dehydrogenase In Complex With A
Sulfate Ion
Length = 404
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 130/279 (46%), Gaps = 25/279 (8%)
Query: 9 MAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG 68
M KI + L F DV L P++S++ SEV + T S +P +++ MDTV
Sbjct: 1 MPNKITKE-ALTFDDVSLIPRKSSVLP-SEVSLKTQLTKNIS----LNIPFLSSAMDTVT 54
Query: 69 TFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAK-DLAGLK-EIL 126
+MA +AK G IHK ++E + + + +K I+ D K EI
Sbjct: 55 ESQMAIAIAKEGGIGIIHKNMSIEAQR----KEIEKVKTYKFQKTINTNGDTNEQKPEIF 110
Query: 127 AALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIK 186
A +E + + F + + + ++ ++ T E VEEL+ + D++
Sbjct: 111 TAKQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILV 170
Query: 187 VGIGPGSVC-----TTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVG 241
+ G ++K K + LI AGN+VT E +LI GAD +KVG
Sbjct: 171 IDSAHGHSTRIIELIKKIKTKYPNLDLI--------AGNIVTKEAALDLISVGADCLKVG 222
Query: 242 IGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIIS 280
IGPGS+CTTR+ GVG PQ +A+ + +A + II+
Sbjct: 223 IGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIA 261
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 12/137 (8%)
Query: 437 NSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMS 496
N+ + + DGG GDV KA+ AGAD VM+G +FAG +S E I +GKK K + GM
Sbjct: 254 NTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMG 313
Query: 497 STTAMDKHAGGVAEY----------RAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVG 546
S +AM + G + Y EG VPY G + D + + GGL S Y+G
Sbjct: 314 SISAMKR--GSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLG 371
Query: 547 ASKLKELPRRATFIRCT 563
A+ + +L + F++ +
Sbjct: 372 AATISDLKINSKFVKIS 388
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 285 MAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG 344
M KI + L F DV L P++S++ SEV + T S +P +++ MDTV
Sbjct: 1 MPNKITKE-ALTFDDVSLIPRKSSVLP-SEVSLKTQLTKNIS----LNIPFLSSAMDTVT 54
Query: 345 TFEMAKHLAKHGLFTTIHKYYTLEEWK 371
+MA +AK G IHK ++E +
Sbjct: 55 ESQMAIAIAKEGGIGIIHKNMSIEAQR 81
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 585 TYVGASKLKELPRRATFIRCTAQLNN----VAAEGKTVQVPYRGDVNDTVQDILGGLRSA 640
+YVG + + +R + R NN + EG VPY G + D + + GGL S
Sbjct: 308 SYVGMGSISAM-KRGSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSG 366
Query: 641 CTYVGASKLKELPRRATFIRCT 662
Y+GA+ + +L + F++ +
Sbjct: 367 MGYLGAATISDLKINSKFVKIS 388
>pdb|3FFS|A Chain A, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|B Chain B, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|C Chain C, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
pdb|3FFS|D Chain D, The Crystal Structure Of Cryptosporidium Parvum
Inosine-5'- Monophosphate Dehydrogenase
Length = 400
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 19 LDFKDVMLRPKRSTLKSRS---EVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKH 75
L F+D++L P S + R E +T+ + + +P+I++ MDTV MA
Sbjct: 10 LTFEDILLVPNYSEVLPREVSLETKLTKNVSLK--------IPLISSAMDTVTEHLMAVG 61
Query: 76 LAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYI 135
+A+ G IHK +E ++ + I ++ + ++L KE
Sbjct: 62 MARLGGIGIIHKNMDMESQVNEVLKVKNWISNLEKNESTPDQNLD--KESTDGKDTKSNN 119
Query: 136 CLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPG-SV 194
+D Y+ +D R+R V A V E + L+ +G DVI + G S+
Sbjct: 120 NIDA---YSNENLDNKGRLR------VGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSL 170
Query: 195 CTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKT 254
R + I GNVVT E +ELI +GAD IKVGIGPGS+CTTR+
Sbjct: 171 NIIRTLKEIKSKMNIDVI-----VGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVA 225
Query: 255 GVGYPQFSAVLECADAAHGLGGHIIS 280
GVG PQ +A+ +C+ A G II+
Sbjct: 226 GVGVPQITAIEKCSSVASKFGIPIIA 251
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFY-GMSSTTAM 501
+ DGG GD+ KA+ GA VM+G + AG ++S GE E G V +Y GM S AM
Sbjct: 250 IADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEK-ELIGDTVYKYYRGMGSVGAM 308
Query: 502 DKHAGG--VAEYR-----AAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELP 554
+G E R EG +V Y+G++ V ++GGLRS Y+G++ ++EL
Sbjct: 309 KSGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELW 368
Query: 555 RRATFIRCT 563
++++++ T
Sbjct: 369 KKSSYVEIT 377
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 609 NNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCT 662
N + EG +V Y+G++ V ++GGLRS Y+G++ ++EL ++++++ T
Sbjct: 324 NKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKKSSYVEIT 377
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 295 LDFKDVMLRPKRSTLKSRS---EVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKH 351
L F+D++L P S + R E +T+ + + +P+I++ MDTV MA
Sbjct: 10 LTFEDILLVPNYSEVLPREVSLETKLTKNVSLK--------IPLISSAMDTVTEHLMAVG 61
Query: 352 LAKHGLFTTIHKYYTLE 368
+A+ G IHK +E
Sbjct: 62 MARLGGIGIIHKNMDME 78
>pdb|3TSB|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
pdb|3TSB|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
pdb|3TSD|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
Complexed With Xmp
pdb|3TSD|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Bacillus Anthracis Str. Ames
Complexed With Xmp
Length = 511
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG GD+ KA+ AGA VMLG MFAG +S GE G++ K++ GM S AM+
Sbjct: 363 IADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAME 422
Query: 503 KHAGGVAEY-------RAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 555
K G Y EG +VPY+G + DTV ++GGLR+ Y GA L+ L
Sbjct: 423 K--GSKDRYFQEGNKKLVPEGIEGRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLRE 480
Query: 556 RATFIRCT 563
A FIR +
Sbjct: 481 NAQFIRMS 488
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 108 VAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGN 167
V + G++A + + ++ A ++ I LD A+G++Q +D V+ +R YP IIAGN
Sbjct: 247 VGAAVGVTADAMTRIDALVKA--SVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGN 304
Query: 168 VVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQA--------- 218
V T E + LI +GA+V+KVGIGPGS+CTTR+ L Y C +A
Sbjct: 305 VATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIA 364
Query: 219 --GNVVTGEMVEELILSGADVIKVG 241
G +G+MV+ L +GA V+ +G
Sbjct: 365 DGGIKYSGDMVKAL-AAGAHVVMLG 388
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 614 EGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCT 662
EG +VPY+G + DTV ++GGLR+ Y GA L+ L A FIR +
Sbjct: 440 EGIEGRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLRENAQFIRMS 488
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 27/41 (65%)
Query: 381 IKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421
I +ADGG GD+ KA+ AGA VMLG MFAG +S GE
Sbjct: 360 IPVIADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGE 400
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 354
L F DV+L P +S + R EV + S +P+I+A MDTV +MA +A+
Sbjct: 35 LTFDDVLLVPAKSDVLPR-EVSVKTVL----SESLQLNIPLISAGMDTVTEADMAIAMAR 89
Query: 355 HGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSP 392
G IHK ++E+ + D +K G + P
Sbjct: 90 QGGLGIIHKNMSIEQQ----AEQVDKVKRSESGVISDP 123
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 19 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 78
L F DV+L P +S + R EV + S +P+I+A MDTV +MA +A+
Sbjct: 35 LTFDDVLLVPAKSDVLPR-EVSVKTVL----SESLQLNIPLISAGMDTVTEADMAIAMAR 89
Query: 79 HGLFTTIHKYYTLEE 93
G IHK ++E+
Sbjct: 90 QGGLGIIHKNMSIEQ 104
>pdb|2CU0|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
pdb|2CU0|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
Length = 486
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG GD+ KA+ AGAD VMLG + AG ++ G+ + +G+K K + GM S AM
Sbjct: 332 IADGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMM 391
Query: 503 K------HAGGVAEYR--AAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELP 554
K + GG + R EG VPYRG V++ + ++GGL++ YVGA ++EL
Sbjct: 392 KGGAERYYQGGYMKTRKFVPEGVEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELK 451
Query: 555 RRATFIRCT 563
+ F+ T
Sbjct: 452 EKGEFVIIT 460
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 219 GNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHI 278
GN+ + V++L AD +KVGIGPGS+CTTR+ GVG PQ +AV AD A G ++
Sbjct: 274 GNIANPKAVDDLTF--ADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYV 331
Query: 279 IS 280
I+
Sbjct: 332 IA 333
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 132 IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP 191
++ I +D A+ + + ++ +R+ I+ GN+ + V++L AD +KVGIGP
Sbjct: 241 VDVIVVDTAHAHNLKAIKSMKEMRQKVDADFIV-GNIANPKAVDDLTF--ADAVKVGIGP 297
Query: 192 GSVCTTRL 199
GS+CTTR+
Sbjct: 298 GSICTTRI 305
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 21 FKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHG 80
F DV+L P+ + ++ + +VD++ T +PI++A MDTV +EMA +A+ G
Sbjct: 17 FDDVLLIPQATEVEPK-DVDVSTRIT----PNVKLNIPILSAAMDTVTEWEMAVAMAREG 71
Query: 81 LFTTIHKYYTLEE 93
IH+ +EE
Sbjct: 72 GLGVIHRNMGIEE 84
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 297 FKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHG 356
F DV+L P+ + ++ + +VD++ T +PI++A MDTV +EMA +A+ G
Sbjct: 17 FDDVLLIPQATEVEPK-DVDVSTRIT----PNVKLNIPILSAAMDTVTEWEMAVAMAREG 71
Query: 357 LFTTIHKYYTLEE 369
IH+ +EE
Sbjct: 72 GLGVIHRNMGIEE 84
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 614 EGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCT 662
EG VPYRG V++ + ++GGL++ YVGA ++EL + F+ T
Sbjct: 412 EGVEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKGEFVIIT 460
>pdb|4AVF|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
pdb|4AVF|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
pdb|4AVF|C Chain C, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
pdb|4AVF|D Chain D, Crystal Structure Of Pseudomonas Aeruginosa Inosine 5'-
Monophosphate Dehydrogenase
Length = 490
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 14/133 (10%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAM- 501
+ DGG GD+AKAM AGA VM+G MFAG +++ GE+ G+ K + GM S AM
Sbjct: 336 IADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMS 395
Query: 502 -----------DKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKL 550
D AG AE EG +VPY+G ++ V ++GGLR+A Y G++ +
Sbjct: 396 GSQGSSDRYFQDASAG--AEKLVPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADI 453
Query: 551 KELPRRATFIRCT 563
+++ + F+R T
Sbjct: 454 QQMRTQPQFVRIT 466
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 236 DVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIIS 280
D +KVGIGPGS+CTTR+ GVG PQ SA+ A A G G +I+
Sbjct: 293 DAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIA 337
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%)
Query: 141 NGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRL 199
+G+++ ++ VR +++ +P +I GN+ T E + L +GAD +KVGIGPGS+CTTR+
Sbjct: 251 HGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRI 309
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 601 FIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIR 660
F +A + EG +VPY+G ++ V ++GGLR+A Y G++ ++++ + F+R
Sbjct: 405 FQDASAGAEKLVPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQPQFVR 464
Query: 661 CT 662
T
Sbjct: 465 IT 466
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 14 INDIKLDFKDVML-------RPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDT 66
I+ L F DV+L PK +LK+R +TR +P+++A MDT
Sbjct: 5 ISQEALTFDDVLLIPGYSEVLPKDVSLKTR----LTRGIELN--------IPLVSAAMDT 52
Query: 67 VGTFEMAKHLAKHGLFTTIHKYYTLEEWKA 96
V +A +A+ G IHK +E+ A
Sbjct: 53 VTEARLAIAMAQEGGIGIIHKNMGIEQQAA 82
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 290 INDIKLDFKDVML-------RPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDT 342
I+ L F DV+L PK +LK+R +TR +P+++A MDT
Sbjct: 5 ISQEALTFDDVLLIPGYSEVLPKDVSLKTR----LTRGIELN--------IPLVSAAMDT 52
Query: 343 VGTFEMAKHLAKHGLFTTIHKYYTLEEWKA 372
V +A +A+ G IHK +E+ A
Sbjct: 53 VTEARLAIAMAQEGGIGIIHKNMGIEQQAA 82
>pdb|3ZFH|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Inosine
5'-monophosphate Dehydrogenase
Length = 510
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 14/133 (10%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAM- 501
+ DGG GD+AKAM AGA VM+G MFAG +++ GE+ G+ K + GM S AM
Sbjct: 356 IADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMS 415
Query: 502 -----------DKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKL 550
D AG AE EG +VPY+G ++ V ++GGLR+A Y G++ +
Sbjct: 416 GSQGSSDRYFQDASAG--AEKLVPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADI 473
Query: 551 KELPRRATFIRCT 563
+++ + F+R T
Sbjct: 474 QQMRTQPQFVRIT 486
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 236 DVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIIS 280
D +KVGIGPGS+CTTR+ GVG PQ SA+ A A G G +I+
Sbjct: 313 DAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIA 357
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%)
Query: 141 NGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRL 199
+G+++ ++ VR +++ +P +I GN+ T E + L +GAD +KVGIGPGS+CTTR+
Sbjct: 271 HGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRI 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 601 FIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIR 660
F +A + EG +VPY+G ++ V ++GGLR+A Y G++ ++++ + F+R
Sbjct: 425 FQDASAGAEKLVPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQPQFVR 484
Query: 661 CT 662
T
Sbjct: 485 IT 486
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 2 FQKFLTAMAQKIINDIKLDFKDVML-------RPKRSTLKSRSEVDITRTFTFRNSGKTY 54
FQ + ++Q+ L F DV+L PK +LK+R +TR
Sbjct: 18 FQGHMLRISQE-----ALTFDDVLLIPGYSEVLPKDVSLKTR----LTRGIELN------ 62
Query: 55 QGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKA 96
+P+++A MDTV +A +A+ G IHK +E+ A
Sbjct: 63 --IPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAA 102
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 290 INDIKLDFKDVML-------RPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDT 342
I+ L F DV+L PK +LK+R +TR +P+++A MDT
Sbjct: 25 ISQEALTFDDVLLIPGYSEVLPKDVSLKTR----LTRGIELN--------IPLVSAAMDT 72
Query: 343 VGTFEMAKHLAKHGLFTTIHKYYTLEEWKA 372
V +A +A+ G IHK +E+ A
Sbjct: 73 VTEARLAIAMAQEGGIGIIHKNMGIEQQAA 102
>pdb|3USB|A Chain A, Crystal Structure Of Bacillus Anthracis Inosine
Monophosphate Dehydrogenase In The Complex With Imp
pdb|3USB|B Chain B, Crystal Structure Of Bacillus Anthracis Inosine
Monophosphate Dehydrogenase In The Complex With Imp
Length = 511
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 55/87 (63%)
Query: 132 IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP 191
++ I LD A+G++Q +D V+ +R YP IIAGNV T E + LI +GA+V+KVGIGP
Sbjct: 269 VDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGP 328
Query: 192 GSVCTTRLKNKTSDFFLIQFYSCIPQA 218
GS+CTTR+ L Y C +A
Sbjct: 329 GSICTTRVVAGVGVPQLTAVYDCATEA 355
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG GD KA+ AGA V LG FAG +S GE G++ K++ G S A +
Sbjct: 363 IADGGIKYSGDXVKALAAGAHVVXLGSXFAGVAESPGETEIYQGRQFKVYRGXGSVGAXE 422
Query: 503 KHAGGVAEY-------RAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 555
K G Y EG +VPY+G + DTV ++GGLR+ Y GA L+ L
Sbjct: 423 K--GSKDRYFQEGNKKLVPEGIEGRVPYKGPLADTVHQLVGGLRAGXGYCGAQDLEFLRE 480
Query: 556 RATFIRCT 563
A FIR +
Sbjct: 481 NAQFIRXS 488
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 614 EGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCT 662
EG +VPY+G + DTV ++GGLR+ Y GA L+ L A FIR +
Sbjct: 440 EGIEGRVPYKGPLADTVHQLVGGLRAGXGYCGAQDLEFLRENAQFIRXS 488
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 24/41 (58%)
Query: 381 IKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421
I +ADGG GD KA+ AGA V LG FAG +S GE
Sbjct: 360 IPVIADGGIKYSGDXVKALAAGAHVVXLGSXFAGVAESPGE 400
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 354
L F DV+L P +S + R EV + S +P+I+A DTV + A A+
Sbjct: 35 LTFDDVLLVPAKSDVLPR-EVSVKTVL----SESLQLNIPLISAGXDTVTEADXAIAXAR 89
Query: 355 HGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSP 392
G IHK ++E+ + D +K G + P
Sbjct: 90 QGGLGIIHKNXSIEQQ----AEQVDKVKRSESGVISDP 123
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 19 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 78
L F DV+L P +S + R EV + S +P+I+A DTV + A A+
Sbjct: 35 LTFDDVLLVPAKSDVLPR-EVSVKTVL----SESLQLNIPLISAGXDTVTEADXAIAXAR 89
Query: 79 HGLFTTIHKYYTLEE 93
G IHK ++E+
Sbjct: 90 QGGLGIIHKNXSIEQ 104
>pdb|1ZFJ|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh; Ec 1.1.1.205)
From Streptococcus Pyogenes
Length = 491
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG GD+ KA+ AG + V LG FAG D++ GE G+K K + G S A
Sbjct: 340 IADGGIKYSGDIVKALAAGGNAVXLGSXFAGTDEAPGETEIYQGRKYKTYRGXGSIAAXK 399
Query: 503 KHA------GGVAEYR--AAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELP 554
K + G V E EG +V Y+G +D V LGG+RS YVGA ++EL
Sbjct: 400 KGSSDRYFQGSVNEANKLVPEGIEGRVAYKGAASDIVFQXLGGIRSGXGYVGAGDIQELH 459
Query: 555 RRATFIRCT 563
A F+ +
Sbjct: 460 ENAQFVEXS 468
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 145 QTFVDFVRRIREMYPKHVIIAGNVVTG---EMVEELILSGADVIKVGIGPGSVCTTRLKN 201
+ ++F ++ + + ++ A VT E E L +GAD I + G K
Sbjct: 206 EKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGVLRK- 264
Query: 202 KTSDFFLIQFYSCIPQ----AGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVG 257
+ + + P AGN+ T E L +G DV+KVGIGPGS+CTTR+ GVG
Sbjct: 265 ------IAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVG 318
Query: 258 YPQFSAVLECADAAHGLGGHIIS 280
PQ +A+ + A A G II+
Sbjct: 319 VPQVTAIYDAAAVAREYGKTIIA 341
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 135 ICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSV 194
I +D A+G++ + + IR +P +IAGN+ T E L +G DV+KVGIGPGS+
Sbjct: 249 IVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSI 308
Query: 195 CTTRL 199
CTTR+
Sbjct: 309 CTTRV 313
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 607 QLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCT 662
+ N + EG +V Y+G +D V LGG+RS YVGA ++EL A F+ +
Sbjct: 413 EANKLVPEGIEGRVAYKGAASDIVFQXLGGIRSGXGYVGAGDIQELHENAQFVEXS 468
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 384 VADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421
+ADGG GD+ KA+ AG + V LG FAG D++ GE
Sbjct: 340 IADGGIKYSGDIVKALAAGGNAVXLGSXFAGTDEAPGE 377
>pdb|1JR1|A Chain A, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
pdb|1JR1|B Chain B, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
Length = 514
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG + G +AKA+ GA VM+G + A ++ GE DG ++K + GM S AMD
Sbjct: 362 IADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKYRGMGSLDAMD 421
Query: 503 KHAGGVAEY-------RAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 555
KH Y + A+G + V +G ++ V ++ G++ +C +GA L ++
Sbjct: 422 KHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKFVPYLIAGIQHSCQDIGAKSLTQV-- 479
Query: 556 RATFIRCTAQLNNVNDTVQDILGGLRSACTY 586
RA + + Q + GG+ S +Y
Sbjct: 480 RAMMYSGELKFEKRTSSAQ-VEGGVHSLHSY 509
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 25/187 (13%)
Query: 12 KIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFE 71
+ + +I +D+++ P TLK +E+ + R+ GK +PI+ N + V
Sbjct: 173 RFLEEIMTKREDLVVAPAGITLKEANEI-LQRS----KKGK----LPIVNENDELVAIIA 223
Query: 72 MAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPE 131
L++ + + + + D K + + I + + L AL
Sbjct: 224 RTD----------------LKKNRDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLALAG 267
Query: 132 IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP 191
++ + LD + G + ++ ++ ++E YP +I GNVVT + LI +G D ++VG+G
Sbjct: 268 VDVVVLDSSQGNSIFQINMIKYMKEKYPNLQVIGGNVVTAAQAKNLIDAGVDALRVGMGC 327
Query: 192 GSVCTTR 198
GS+C T+
Sbjct: 328 GSICITQ 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 219 GNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHI 278
GNVVT + LI +G D ++VG+G GS+C T+ G PQ +AV + ++ A G +
Sbjct: 302 GNVVTAAQAKNLIDAGVDALRVGMGCGSICITQEVLACGRPQATAVYKVSEYARRFGVPV 361
Query: 279 IS 280
I+
Sbjct: 362 IA 363
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 384 VADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421
+ADGG + G +AKA+ GA VM+G + A ++ GE
Sbjct: 362 IADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGE 399
>pdb|1B3O|A Chain A, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1B3O|B Chain B, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1NF7|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NF7|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NFB|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
pdb|1NFB|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
Length = 514
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG + G +AKA+ GA VM+G + A ++ GE DG ++K + GM S AMD
Sbjct: 362 IADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKYRGMGSLDAMD 421
Query: 503 KHAGGVAEY-------RAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 555
KH Y + A+G + V +G ++ V ++ G++ +C +GA L ++
Sbjct: 422 KHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKFVPYLIAGIQHSCQDIGAKSLTQV-- 479
Query: 556 RATFIRCTAQLNNVNDTVQDILGGLRSACTY 586
RA + + Q + GG+ S +Y
Sbjct: 480 RAMMYSGELKFEKRTSSAQ-VEGGVHSLHSY 509
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 58/108 (53%)
Query: 91 LEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDF 150
L++ + + + + D K + + I + + L A ++ + LD + G + ++
Sbjct: 227 LKKNRDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLAQAGVDVVVLDSSQGNSIFQINM 286
Query: 151 VRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTR 198
++ I++ YP +I GNVVT + LI +G D ++VG+G GS+C T+
Sbjct: 287 IKYIKDKYPNLQVIGGNVVTAAQAKNLIDAGVDALRVGMGSGSICITQ 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 219 GNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHI 278
GNVVT + LI +G D ++VG+G GS+C T+ G PQ +AV + ++ A G +
Sbjct: 302 GNVVTAAQAKNLIDAGVDALRVGMGSGSICITQEVLACGRPQATAVYKVSEYARRFGVPV 361
Query: 279 IS 280
I+
Sbjct: 362 IA 363
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 384 VADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421
+ADGG + G +AKA+ GA VM+G + A ++ GE
Sbjct: 362 IADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGE 399
>pdb|4FXS|A Chain A, Inosine 5'-Monophosphate Dehydrogenase From Vibrio
Cholerae Complexed With Imp And Mycophenolic Acid
Length = 496
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG GD++KA+ AGA V +G FAG +++ GE+I G+ K + G S A
Sbjct: 338 IADGGIRFSGDISKAIAAGASCVXVGSXFAGTEEAPGEVILYQGRSYKAYRGXGSLGAXS 397
Query: 503 K-------HAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 555
K A+ EG ++ Y+G + + + GGLRS G++ +++L
Sbjct: 398 KGSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQXGGLRSCXGLTGSATVEDLRT 457
Query: 556 RATFIRCT 563
+A F+R +
Sbjct: 458 KAQFVRIS 465
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 121 GLKEILAALPE--IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELI 178
G +E + AL E ++ + +D ++G+++ + +R R YP II GNV T E LI
Sbjct: 231 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALI 290
Query: 179 LSGADVIKVGIGPGSVCTTRL 199
+G +KVGIGPGS+CTTR+
Sbjct: 291 EAGVSAVKVGIGPGSICTTRI 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 172 EMVEELILSGADVIKVGIGPGSV--CTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEE 229
E V+ L+ +G DV+ + G R++ + + ++ GNV T E
Sbjct: 234 ERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEII-----GGNVATAEGARA 288
Query: 230 LILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIIS 280
LI +G +KVGIGPGS+CTTR+ TGVG PQ +A+ + A A+ G +I+
Sbjct: 289 LIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIA 339
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 372 AFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGEL 422
A V N I +ADGG GD++KA+ AGA V +G FAG +++ GE+
Sbjct: 326 AAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVXVGSXFAGTEEAPGEV 376
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 19 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 78
L F DV+L P ST+ + T R + +P ++A+ DTV +A LA+
Sbjct: 11 LTFDDVLLVPAHSTV-----LPNTADLRTRLTKNIALNIPXVSASXDTVTEARLAIALAQ 65
Query: 79 HGLFTTIHKYYTLEEWKA 96
G IHK ++E+ A
Sbjct: 66 EGGIGFIHKNXSIEQQAA 83
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAK 354
L F DV+L P ST+ + T R + +P ++A+ DTV +A LA+
Sbjct: 11 LTFDDVLLVPAHSTV-----LPNTADLRTRLTKNIALNIPXVSASXDTVTEARLAIALAQ 65
Query: 355 HGLFTTIHKYYTLEEWKA 372
G IHK ++E+ A
Sbjct: 66 EGGIGFIHKNXSIEQQAA 83
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 581 RSACTYVGASKLKELPRRAT--FIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLR 638
RS Y G L + ++ + + + + EG ++ Y+G + + + GGLR
Sbjct: 382 RSYKAYRGXGSLGAXSKGSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQXGGLR 441
Query: 639 SACTYVGASKLKELPRRATFIRCT 662
S G++ +++L +A F+R +
Sbjct: 442 SCXGLTGSATVEDLRTKAQFVRIS 465
>pdb|4AF0|A Chain A, Crystal Structure Of Cryptococcal Inosine Monophosphate
Dehydrogenase
Length = 556
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 13/139 (9%)
Query: 121 GLKEILAALPE--IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELI 178
G K+ L L E ++ + LD + G + ++F++ I++ YPK +IAGNVVT E +LI
Sbjct: 281 GDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLI 340
Query: 179 LSGADVIKVGIGPGSVCTTR------LKNKTSDFFLIQFYS-----CIPQAGNVVTGEMV 227
+GAD +++G+G GS+C T+ T+ + + +F S CI G G +
Sbjct: 341 AAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIA 400
Query: 228 EELILSGADVIKVGIGPGS 246
+ L L + V+ G+ G+
Sbjct: 401 KALALGASAVMMGGLLAGT 419
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 22/133 (16%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG + G +AKA+ GA VM+GG+ AG +S GE +GK+VK++ GM S AM+
Sbjct: 388 IADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAME 447
Query: 503 KHAGGVAE----------------------YRAAEGKTVQVPYRGDVNDTVQDILGGLRS 540
G A + A+G + V +G +N V + GL+
Sbjct: 448 HTQRGSASGKRSILGLDNAATARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQH 507
Query: 541 ACTYVGASKLKEL 553
+ + EL
Sbjct: 508 SLQDAAIKSVSEL 520
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 109/291 (37%), Gaps = 73/291 (25%)
Query: 58 PIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFA-----VQNPDVIKHVAVSS 112
P +++ MDTV MA LA HG IH + EE A +N + + +
Sbjct: 94 PFLSSPMDTVTEDRMAIALALHGGLGIIHHNCSAEEQAAMVRRVKKYENGFITDPLCLGP 153
Query: 113 GISAKDLAGLKEILA--ALP-----EIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIA 165
+ D+ +K +P E + L + G F D I+ + V+
Sbjct: 154 DATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMTTEVVTG 213
Query: 166 GNVVTGEMVEELI--------------------LSGADVIK------------------- 186
+ +T E L+ ++ +D++K
Sbjct: 214 SSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCG 273
Query: 187 --VGIGPGSVCTTRL------------KNKTSDFFLIQFYSCIPQ--------AGNVVTG 224
+G PG +L ++ + + I+F I Q AGNVVT
Sbjct: 274 AAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTR 333
Query: 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLG 275
E +LI +GAD +++G+G GS+C T+ VG PQ +AV A+ A G
Sbjct: 334 EQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFG 384
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 381 IKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421
I +ADGG + G +AKA+ GA VM+GG+ AG +S GE
Sbjct: 385 IPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGE 425
>pdb|4AF0|B Chain B, Crystal Structure Of Cryptococcal Inosine Monophosphate
Dehydrogenase
Length = 556
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 13/139 (9%)
Query: 121 GLKEILAALPE--IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELI 178
G K+ L L E ++ + LD + G + ++F++ I++ YPK +IAGNVVT E +LI
Sbjct: 281 GDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLI 340
Query: 179 LSGADVIKVGIGPGSVCTTR------LKNKTSDFFLIQFYS-----CIPQAGNVVTGEMV 227
+GAD +++G+G GS+C T+ T+ + + +F S CI G G +
Sbjct: 341 AAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIA 400
Query: 228 EELILSGADVIKVGIGPGS 246
+ L L + V+ G+ G+
Sbjct: 401 KALALGASAVMMGGLLAGT 419
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 22/133 (16%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG + G +AKA+ GA VM+GG+ AG +S GE +GK+VK++ GM S AM+
Sbjct: 388 IADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAME 447
Query: 503 KHAGGVAE----------------------YRAAEGKTVQVPYRGDVNDTVQDILGGLRS 540
G A + A+G + V +G +N V + GL+
Sbjct: 448 HTQRGSASGKRSILGLDNAATARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQH 507
Query: 541 ACTYVGASKLKEL 553
+ G + EL
Sbjct: 508 SLQDAGIKSVSEL 520
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 109/291 (37%), Gaps = 73/291 (25%)
Query: 58 PIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFA-----VQNPDVIKHVAVSS 112
P +++ MDTV MA LA HG IH + EE A +N + + +
Sbjct: 94 PFLSSPMDTVTEDRMAIALALHGGLGIIHHNCSAEEQAAMVRRVKKYENGFITDPLCLGP 153
Query: 113 GISAKDLAGLKEILA--ALP-----EIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIA 165
+ D+ +K +P E + L + G F D I+ + V+
Sbjct: 154 DATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMTTEVVTG 213
Query: 166 GNVVTGEMVEELI--------------------LSGADVIK------------------- 186
+ +T E L+ ++ +D++K
Sbjct: 214 SSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCG 273
Query: 187 --VGIGPGSVCTTRL------------KNKTSDFFLIQFYSCIPQ--------AGNVVTG 224
+G PG +L ++ + + I+F I Q AGNVVT
Sbjct: 274 AAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTR 333
Query: 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLG 275
E +LI +GAD +++G+G GS+C T+ VG PQ +AV A+ A G
Sbjct: 334 EQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFG 384
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 381 IKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421
I +ADGG + G +AKA+ GA VM+GG+ AG +S GE
Sbjct: 385 IPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGE 425
>pdb|1JCN|A Chain A, Binary Complex Of Human Type-I Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp
pdb|1JCN|B Chain B, Binary Complex Of Human Type-I Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp
Length = 514
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMD 502
+ DGG + G V KA+ GA VM+G + A ++ GE DG ++K + GM S AM+
Sbjct: 362 IADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAME 421
Query: 503 KHAGGVAEY-------RAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKEL 553
K + Y + A+G + + +G + V ++ G++ C +GA L L
Sbjct: 422 KSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVL 479
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%)
Query: 91 LEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDF 150
L++ + + + + D K + + + ++ + L ++ I LD + G + +
Sbjct: 227 LKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAM 286
Query: 151 VRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTR 198
V I++ YP +I GNVVT + LI +G D ++VG+G GS+C T+
Sbjct: 287 VHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQ 334
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 219 GNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHI 278
GNVVT + LI +G D ++VG+G GS+C T+ G PQ +AV + A+ A G I
Sbjct: 302 GNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPI 361
Query: 279 IS 280
I+
Sbjct: 362 IA 363
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 384 VADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421
+ADGG + G V KA+ GA VM+G + A ++ GE
Sbjct: 362 IADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGE 399
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 314 EVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAF 373
EVD+T T + + KT P+I++ MDTV +MA +A G IH T E++A
Sbjct: 48 EVDLTSALTRKITLKT----PLISSPMDTVTEADMAIAMALMGGIGFIHHNCT-PEFQAN 102
Query: 374 AVQNPDVIKHVADGGCTSP 392
V+ +K+ G T P
Sbjct: 103 EVRK---VKNFEQGFITDP 118
>pdb|1ME8|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Rvp Bound
pdb|1ME9|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Imp Bound
pdb|1MEH|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Imp And Moa Bound
Length = 503
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 439 YLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSST 498
Y+ DGG + A+ GADF+MLG FA ++S + +G +K ++G S+
Sbjct: 352 YIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSS 411
Query: 499 TAMDKHA---GGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 555
A + GG + EG VPY G + D V+ L ++S GA + +L
Sbjct: 412 RARNWQRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQS 471
Query: 556 RA 557
+A
Sbjct: 472 KA 473
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 103 DVIKHVAVSSGISAKDLAGLKEILAALPEI--EYICLDVANGYTQTFVDFVRRIREMYPK 160
D K V +GI+ +D +E + AL E + +C+D ++G+++ + IRE Y
Sbjct: 227 DSQKRYLVGAGINTRDF---RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGD 283
Query: 161 HVII-AGNVVTGEMVEELILSGADVIK 186
V + AGN+V GE L +GAD IK
Sbjct: 284 KVKVGAGNIVDGEGFRYLADAGADFIK 310
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 172 EMVEELILSGADVIKVGIGPG-----SVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEM 226
E V L+ +GADV+ + G + ++ K D + AGN+V GE
Sbjct: 245 ERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVG-------AGNIVDGEG 297
Query: 227 VEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLE 266
L +GAD IK+GIG GS+ TR + G+G Q +AV++
Sbjct: 298 FRYLADAGADFIKIGIGGGSIXITREQKGIGRGQATAVID 337
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 385 ADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQS 418
+DGG + A+ GADF+MLG FA ++S
Sbjct: 357 SDGGIVYDYHMTLALAMGADFIMLGRYFARFEES 390
>pdb|1ME7|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Rvp And Moa Bound
pdb|1MEI|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Xmp And Mycophenolic Acid
Bound
pdb|1MEW|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
Tritrichomonas Foetus With Xmp And Nad Bound
pdb|1AK5|A Chain A, Inosine Monophosphate Dehydrogenase (impdh) From
Tritrichomonas Foetus
Length = 503
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 439 YLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSST 498
Y+ DGG + A+ GADF+MLG FA ++S + +G +K ++G S+
Sbjct: 352 YIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSS 411
Query: 499 TAMDKHA---GGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 555
A + GG + EG VPY G + D V+ L ++S GA + +L
Sbjct: 412 RARNWQRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQS 471
Query: 556 RA 557
+A
Sbjct: 472 KA 473
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 103 DVIKHVAVSSGISAKDLAGLKEILAALPEI--EYICLDVANGYTQTFVDFVRRIREMYPK 160
D K V +GI+ +D +E + AL E + +C+D ++G+++ + IRE Y
Sbjct: 227 DSQKRYLVGAGINTRDF---RERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGD 283
Query: 161 HVII-AGNVVTGEMVEELILSGAD 183
V + AGN+V GE L +GAD
Sbjct: 284 KVKVGAGNIVDGEGFRYLADAGAD 307
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 385 ADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQS 418
+DGG + A+ GADF+MLG FA ++S
Sbjct: 357 SDGGIVYDYHMTLALAMGADFIMLGRYFARFEES 390
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 172 EMVEELILSGADVIKVGIGPG-----SVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEM 226
E V L+ +GADV+ + G + ++ K D + AGN+V GE
Sbjct: 245 ERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKV-------GAGNIVDGEG 297
Query: 227 VEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLE 266
L +GAD IK+GIG GS+C TR + G+G Q +AV++
Sbjct: 298 FRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVID 337
>pdb|1PVN|A Chain A, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
pdb|1PVN|B Chain B, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
pdb|1PVN|C Chain C, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
pdb|1PVN|D Chain D, The Crystal Structure Of The Complex Between Imp
Dehydrogenase Catalytic Domain And A Transition State
Analogue Mzp
Length = 376
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 439 YLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSST 498
Y+ DGG + A+ GADF+MLG FA ++S + +G +K ++G S+
Sbjct: 225 YIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSS 284
Query: 499 TAMDKHA---GGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 555
A + GG + EG VPY G + D V+ L ++S GA + +L
Sbjct: 285 RARNWQRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQS 344
Query: 556 RA 557
+A
Sbjct: 345 KA 346
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 64/264 (24%)
Query: 12 KIINDIKLDFKDVMLRPKRSTLKS-RSEVDITRTFTFRNSGKTYQ---GVPIIAANMDTV 67
K N+ F + +L P ST+ S V+++ G+ + +P+++A M +V
Sbjct: 2 KYYNEPCHTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSV 61
Query: 68 GTFEMAKHLAKHGLFTTIHKYYTLEEWKAF--AVQN-PDVIKHVAVSSGISAKDLAGLKE 124
+MA LA+ G + I ++E A AV+N D K V +GI+ +D +E
Sbjct: 62 SGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKNFKDSQKRYLVGAGINTRDF---RE 118
Query: 125 ILAALPEI--EYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGA 182
+ AL E + +C+D ++G+++ + IRE Y
Sbjct: 119 RVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKY-----------------------G 155
Query: 183 DVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGI 242
D +KVG AGN+V GE L +GAD IK+GI
Sbjct: 156 DKVKVG-----------------------------AGNIVDGEGFRYLADAGADFIKIGI 186
Query: 243 GPGSVCTTRLKTGVGYPQFSAVLE 266
G GS+C TR + G+G Q +AV++
Sbjct: 187 GGGSICITREQKGIGRGQATAVID 210
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 385 ADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQS 418
+DGG + A+ GADF+MLG FA ++S
Sbjct: 230 SDGGIVYDYHMTLALAMGADFIMLGRYFARFEES 263
>pdb|1LRT|A Chain A, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
pdb|1LRT|B Chain B, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
pdb|1LRT|C Chain C, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
pdb|1LRT|D Chain D, Crystal Structure Of Ternary Complex Of Tritrichomonas
Foetus Inosine-5'-Monophosphate Dehydrogenase:
Structural Characterization Of Nad+ Site In Microbial
Enzyme
Length = 376
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 439 YLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSST 498
Y+ DGG + A+ GADF+MLG FA ++S + +G +K ++G S+
Sbjct: 225 YIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSS 284
Query: 499 TAMDKHA---GGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 555
A + GG + EG VPY G + D V+ L ++S GA + +L
Sbjct: 285 RARNWQRYDLGGKQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQS 344
Query: 556 RA 557
+A
Sbjct: 345 KA 346
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 64/264 (24%)
Query: 12 KIINDIKLDFKDVMLRPKRSTLKS-RSEVDITRTFTFRNSGKTYQ---GVPIIAANMDTV 67
K N+ F + +L P ST+ S V+++ G+ + +P+++A M +V
Sbjct: 2 KYYNEPCHTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSV 61
Query: 68 GTFEMAKHLAKHGLFTTIHKYYTLEEWKAF--AVQN-PDVIKHVAVSSGISAKDLAGLKE 124
+MA LA+ G + I ++E A AV+N D K V +GI+ +D +E
Sbjct: 62 SGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKNFKDSQKRYLVGAGINTRDF---RE 118
Query: 125 ILAALPEI--EYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGA 182
+ AL E + +C+D ++G+++ + IR+ Y
Sbjct: 119 RVPALVEAGADVLCIDSSDGFSEWQKITIGWIRDKY-----------------------G 155
Query: 183 DVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGI 242
D +KVG AGN+V GE L +GAD IK+GI
Sbjct: 156 DKVKVG-----------------------------AGNIVDGEGFRYLADAGADFIKIGI 186
Query: 243 GPGSVCTTRLKTGVGYPQFSAVLE 266
G GS+C TR + G+G Q +AV++
Sbjct: 187 GGGSICITREQKGIGRGQATAVID 210
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 385 ADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQS 418
+DGG + A+ GADF+MLG FA ++S
Sbjct: 230 SDGGIVYDYHMTLALAMGADFIMLGRYFARFEES 263
>pdb|2QR6|A Chain A, Crystal Structure Of Imp DehydrogenaseGMP REDUCTASE-Like
Protein (Np_599840.1) From Corynebacterium Glutamicum
Atcc 13032 Kitasato At 1.50 A Resolution
Length = 393
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 384 VADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGV 443
+ADG + GDV KA+ GAD V+LG A +++ G + F+P V + GV
Sbjct: 281 IADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAG-----KGYFWPAVAAHPRFPRGV 335
Query: 444 V 444
V
Sbjct: 336 V 336
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 439 YLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 480
Y+ + DG + GDV KA+ GAD V+LG A +++ G+
Sbjct: 277 YVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAAGK 318
>pdb|4FR0|A Chain A, Arsm Arsenic(Iii) S-Adenosylmethionine Methyltransferase
With Sam
pdb|4FS8|A Chain A, The Structure Of An As(Iii) S-Adenosylmethionine
Methyltransferase: Insights Into The Mechanism Of
Arsenic Biotransformation
pdb|4FSD|A Chain A, Arsm Arsenic(Iii) S-Adenosylmethionine Methyltransferase
With As(Iii)
Length = 383
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 126 LAALPEIEYICLDVANGY-TQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEE----LILS 180
LA EI + D Y + + D RR+ E + I+ G + G + E L+
Sbjct: 183 LALFKEIHRVLRDGGELYFSDVYAD--RRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240
Query: 181 GA--DVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEE 229
DV V +GP V +L+ D +QFYSC + V T E E
Sbjct: 241 AGFRDVRLVSVGPVDVSDPQLRKLVPD---VQFYSCTFRCFKVATLEATRE 288
>pdb|3I4G|A Chain A, Crystal Structure Of A Susd-Like Carbohydrate Binding
Protein (Bf0978) From Bacteroides Fragilis Nctc 9343 At
1.35 A Resolution
Length = 528
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 194 VCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELI-LSGADVIKVGIGPGSVCTTRL 252
+ R T F+L ++ +P NV+TGE + S AD++K C T
Sbjct: 122 IAEARFLRATQYFYLASYFKNVPLVENVLTGEEANNVTKTSQADILK-------WCVTEF 174
Query: 253 KTGVG-YPQFSAV 264
P+FSA+
Sbjct: 175 TAAAADLPRFSAI 187
>pdb|1TYG|A Chain A, Structure Of The Thiazole SynthaseTHIS COMPLEX
pdb|1TYG|C Chain C, Structure Of The Thiazole SynthaseTHIS COMPLEX
Length = 253
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 9/62 (14%)
Query: 355 HGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAG 414
G+ ++ + +E+ K + + D G SP D A AM GAD V+L +G
Sbjct: 160 QGILNPLNLSFIIEQAK---------VPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSG 210
Query: 415 HD 416
D
Sbjct: 211 AD 212
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHD 475
+VD G SP D A AM GAD V+L +G D
Sbjct: 180 IVDAGIGSPKDAAYAMELGADGVLLNTAVSGAD 212
>pdb|1ZNN|A Chain A, Structure Of The Synthase Subunit Of Plp Synthase
pdb|1ZNN|B Chain B, Structure Of The Synthase Subunit Of Plp Synthase
pdb|1ZNN|C Chain C, Structure Of The Synthase Subunit Of Plp Synthase
pdb|1ZNN|D Chain D, Structure Of The Synthase Subunit Of Plp Synthase
pdb|1ZNN|E Chain E, Structure Of The Synthase Subunit Of Plp Synthase
pdb|1ZNN|F Chain F, Structure Of The Synthase Subunit Of Plp Synthase
Length = 325
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 385 ADGGCTSPGDVAKAMGAGADFVMLG-GMFAGHDQSGGELTNIE----YMFFPLVGDMNSY 439
A GG T+P D A M GAD V +G G+F + +E Y + L+ ++
Sbjct: 242 AAGGVTTPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTHYEDYELIAHLSKG 301
Query: 440 LGGVVDG 446
LGG + G
Sbjct: 302 LGGAMRG 308
>pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin
Family Member 3b In Complex With Adp
pdb|3B6U|B Chain B, Crystal Structure Of The Motor Domain Of Human Kinesin
Family Member 3b In Complex With Adp
Length = 372
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 575 DILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYR-GDVNDTVQDI 633
D+ G R A T +LKE + + + + +GK+ +PYR + +QD
Sbjct: 258 DLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDS 317
Query: 634 LGG 636
LGG
Sbjct: 318 LGG 320
>pdb|1XM3|A Chain A, Crystal Structure Of Northeast Structural Genomics Target
Sr156
pdb|1XM3|B Chain B, Crystal Structure Of Northeast Structural Genomics Target
Sr156
pdb|1XM3|C Chain C, Crystal Structure Of Northeast Structural Genomics Target
Sr156
pdb|1XM3|D Chain D, Crystal Structure Of Northeast Structural Genomics Target
Sr156
Length = 264
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHD 475
+VD G SP D A A GAD V+L +G D
Sbjct: 182 IVDAGIGSPKDAAYAXELGADGVLLNTAVSGAD 214
>pdb|1WQA|A Chain A, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|B Chain B, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|C Chain C, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
pdb|1WQA|D Chain D, Crystal Structure Of Pyrococcus Horikoshii
PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+
Length = 455
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 155 REMYPKHVIIAGN--VVTGEMVEELILS-----GADVIKVGIGPGSVCTTRLKNKTSD 205
RE K +++ G V+GEM++E ++S G DVI VGI P K+ +D
Sbjct: 36 REGRKKPLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDVGIAPTPAVQWATKHFNAD 93
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,005,450
Number of Sequences: 62578
Number of extensions: 874271
Number of successful extensions: 2620
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2361
Number of HSP's gapped (non-prelim): 231
length of query: 671
length of database: 14,973,337
effective HSP length: 105
effective length of query: 566
effective length of database: 8,402,647
effective search space: 4755898202
effective search space used: 4755898202
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)