Query psy3862
Match_columns 671
No_of_seqs 317 out of 2136
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 19:21:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3862.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3862hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4af0_A Inosine-5'-monophosphat 100.0 1.5E-75 5E-80 645.8 25.9 393 17-664 58-537 (556)
2 3ffs_A Inosine-5-monophosphate 100.0 6.8E-60 2.3E-64 513.7 11.8 318 291-664 6-379 (400)
3 4fo4_A Inosine 5'-monophosphat 100.0 5.8E-57 2E-61 486.4 29.5 332 14-664 9-344 (366)
4 4af0_A Inosine-5'-monophosphat 100.0 1E-58 3.5E-63 511.9 12.2 252 292-597 57-448 (556)
5 3khj_A Inosine-5-monophosphate 100.0 1.1E-54 3.8E-59 468.7 28.1 330 13-664 7-340 (361)
6 4fxs_A Inosine-5'-monophosphat 100.0 1.5E-53 5.1E-58 477.6 28.9 331 15-664 7-467 (496)
7 4avf_A Inosine-5'-monophosphat 100.0 3.2E-54 1.1E-58 482.5 19.1 375 16-664 7-468 (490)
8 3r2g_A Inosine 5'-monophosphat 100.0 1.6E-54 5.6E-59 465.5 13.4 311 292-664 5-326 (361)
9 3usb_A Inosine-5'-monophosphat 100.0 7E-52 2.4E-56 465.6 23.3 382 9-664 25-490 (511)
10 2c6q_A GMP reductase 2; TIM ba 100.0 1.3E-44 4.4E-49 389.1 35.2 338 12-666 13-351 (351)
11 3ffs_A Inosine-5-monophosphate 100.0 6E-46 2.1E-50 404.1 24.9 322 15-565 6-379 (400)
12 1me8_A Inosine-5'-monophosphat 100.0 4.4E-46 1.5E-50 418.1 12.5 324 290-664 5-481 (503)
13 3r2g_A Inosine 5'-monophosphat 100.0 2.4E-42 8.3E-47 371.1 28.8 319 16-565 5-326 (361)
14 2cu0_A Inosine-5'-monophosphat 100.0 5E-40 1.7E-44 367.6 25.2 374 16-663 12-461 (486)
15 1zfj_A Inosine monophosphate d 100.0 4.9E-38 1.7E-42 351.3 26.6 375 16-663 9-469 (491)
16 1me8_A Inosine-5'-monophosphat 100.0 1E-37 3.6E-42 350.2 20.2 382 13-565 4-481 (503)
17 1vrd_A Inosine-5'-monophosphat 100.0 2.4E-36 8.3E-41 338.1 19.2 373 16-664 14-471 (494)
18 1jcn_A Inosine monophosphate d 100.0 8E-35 2.7E-39 327.5 28.7 355 16-664 27-496 (514)
19 1eep_A Inosine 5'-monophosphat 100.0 7.1E-34 2.4E-38 310.9 27.1 330 16-664 7-390 (404)
20 4fo4_A Inosine 5'-monophosphat 100.0 1E-35 3.5E-40 320.9 11.4 233 287-548 7-252 (366)
21 1ypf_A GMP reductase; GUAC, pu 100.0 8.6E-33 2.9E-37 295.6 25.0 316 16-664 11-328 (336)
22 4fxs_A Inosine-5'-monophosphat 100.0 3.4E-33 1.2E-37 312.9 10.6 230 291-548 7-375 (496)
23 3khj_A Inosine-5-monophosphate 100.0 8.8E-33 3E-37 298.0 9.7 229 291-548 9-248 (361)
24 4avf_A Inosine-5'-monophosphat 100.0 4E-32 1.4E-36 303.9 9.9 230 291-548 6-373 (490)
25 3usb_A Inosine-5'-monophosphat 100.0 2E-31 6.8E-36 299.6 10.4 215 290-532 30-379 (511)
26 2c6q_A GMP reductase 2; TIM ba 100.0 5E-31 1.7E-35 283.5 11.4 239 287-548 12-264 (351)
27 2cu0_A Inosine-5'-monophosphat 100.0 5.5E-29 1.9E-33 278.3 9.7 258 291-605 11-399 (486)
28 1jcn_A Inosine monophosphate d 99.9 6.9E-26 2.4E-30 254.8 12.3 229 292-548 27-399 (514)
29 2qr6_A IMP dehydrogenase/GMP r 99.9 1.3E-23 4.4E-28 228.9 15.9 283 291-655 32-388 (393)
30 1zfj_A Inosine monophosphate d 99.9 1.2E-23 4.1E-28 235.0 9.4 246 293-592 10-395 (491)
31 1vrd_A Inosine-5'-monophosphat 99.9 1.4E-23 4.8E-28 234.8 9.7 229 292-548 14-381 (494)
32 1eep_A Inosine 5'-monophosphat 99.8 2.1E-20 7.3E-25 204.2 10.1 228 293-548 8-297 (404)
33 2qr6_A IMP dehydrogenase/GMP r 99.8 1.3E-18 4.4E-23 189.5 22.8 220 16-271 33-266 (393)
34 1ypf_A GMP reductase; GUAC, pu 99.8 3.6E-20 1.2E-24 197.9 8.2 211 292-532 11-230 (336)
35 3vkj_A Isopentenyl-diphosphate 99.6 7.8E-15 2.7E-19 158.5 15.1 167 18-193 26-223 (368)
36 3sr7_A Isopentenyl-diphosphate 99.6 7.3E-15 2.5E-19 158.3 11.9 217 18-241 53-307 (365)
37 3bo9_A Putative nitroalkan dio 99.4 2.8E-12 9.7E-17 136.3 16.9 202 38-267 12-223 (326)
38 2uva_G Fatty acid synthase bet 99.3 2.1E-12 7.3E-17 163.7 13.2 215 35-272 566-818 (2060)
39 2gjl_A Hypothetical protein PA 99.3 3.8E-11 1.3E-15 127.4 16.2 186 51-258 10-210 (328)
40 2z6i_A Trans-2-enoyl-ACP reduc 99.2 8.4E-11 2.9E-15 125.1 16.5 197 51-271 7-213 (332)
41 1p0k_A Isopentenyl-diphosphate 99.2 1.4E-10 4.9E-15 124.0 16.9 213 17-241 21-280 (349)
42 1ea0_A Glutamate synthase [NAD 99.2 1.9E-10 6.5E-15 140.2 18.0 177 2-192 810-1028(1479)
43 3bw2_A 2-nitropropane dioxygen 99.2 6.1E-10 2.1E-14 120.1 18.2 186 41-241 1-237 (369)
44 3sr7_A Isopentenyl-diphosphate 99.1 7.8E-11 2.7E-15 127.0 8.8 267 294-656 53-352 (365)
45 1vcf_A Isopentenyl-diphosphate 99.1 2.7E-10 9.4E-15 121.1 12.1 217 16-241 23-285 (332)
46 2nli_A Lactate oxidase; flavoe 99.1 3E-09 1E-13 114.9 20.2 207 18-241 49-313 (368)
47 1p4c_A L(+)-mandelate dehydrog 99.0 7.3E-09 2.5E-13 112.3 19.7 206 17-241 40-307 (380)
48 1gox_A (S)-2-hydroxy-acid oxid 99.0 3.9E-09 1.3E-13 114.1 16.3 206 18-241 40-309 (370)
49 1kbi_A Cytochrome B2, L-LCR; f 99.0 1.7E-08 5.7E-13 113.4 20.6 211 18-241 158-432 (511)
50 2nzl_A Hydroxyacid oxidase 1; 99.0 6.2E-09 2.1E-13 113.3 16.6 207 18-241 63-336 (392)
51 1p4c_A L(+)-mandelate dehydrog 99.0 9.7E-10 3.3E-14 119.2 9.2 274 294-667 41-361 (380)
52 2uv8_G Fatty acid synthase sub 98.9 1.2E-09 4E-14 138.3 9.7 214 38-272 576-825 (2051)
53 3vkj_A Isopentenyl-diphosphate 98.9 2.9E-09 9.7E-14 115.0 10.9 268 295-655 27-339 (368)
54 1ofd_A Ferredoxin-dependent gl 98.9 8E-09 2.7E-13 126.4 12.6 214 16-241 837-1128(1520)
55 3sgz_A Hydroxyacid oxidase 2; 98.8 1.2E-07 3.9E-12 101.7 18.7 206 18-241 38-301 (352)
56 3zen_D Fatty acid synthase; tr 98.7 1.2E-08 4E-13 133.5 7.9 212 37-272 413-669 (3089)
57 2nli_A Lactate oxidase; flavoe 98.7 3.6E-08 1.2E-12 106.4 10.1 256 295-656 50-358 (368)
58 1p0k_A Isopentenyl-diphosphate 98.7 4.9E-08 1.7E-12 104.3 10.7 278 294-656 22-325 (349)
59 1gox_A (S)-2-hydroxy-acid oxid 98.7 4.6E-08 1.6E-12 105.7 9.7 261 295-658 41-356 (370)
60 2uva_G Fatty acid synthase bet 98.6 1.7E-08 5.9E-13 128.4 6.5 61 312-377 567-630 (2060)
61 2nzl_A Hydroxyacid oxidase 1; 98.6 4.9E-08 1.7E-12 106.3 8.3 261 295-656 64-381 (392)
62 3bo9_A Putative nitroalkan dio 98.6 5.8E-08 2E-12 103.1 7.9 192 315-548 13-217 (326)
63 1kbi_A Cytochrome B2, L-LCR; f 98.4 5.4E-07 1.8E-11 101.2 10.8 261 295-655 159-476 (511)
64 1vcf_A Isopentenyl-diphosphate 98.4 6.9E-07 2.4E-11 94.9 9.2 277 293-656 24-329 (332)
65 2e6f_A Dihydroorotate dehydrog 98.3 3.8E-06 1.3E-10 88.2 12.5 194 39-241 2-273 (314)
66 2gjl_A Hypothetical protein PA 98.3 1.3E-06 4.5E-11 92.4 8.8 183 330-548 13-213 (328)
67 3bw2_A 2-nitropropane dioxygen 98.2 3.8E-06 1.3E-10 90.4 10.2 45 332-376 10-56 (369)
68 1ep3_A Dihydroorotate dehydrog 98.2 3.1E-06 1E-10 88.3 8.9 196 37-241 3-270 (311)
69 3sgz_A Hydroxyacid oxidase 2; 98.1 5E-06 1.7E-10 89.1 8.4 206 295-532 39-292 (352)
70 3q58_A N-acetylmannosamine-6-p 98.1 3.6E-05 1.2E-09 77.7 14.1 160 69-241 38-210 (229)
71 1gte_A Dihydropyrimidine dehyd 98.0 1.7E-05 5.8E-10 96.0 12.6 196 37-241 529-816 (1025)
72 2z6i_A Trans-2-enoyl-ACP reduc 98.0 1.4E-05 4.9E-10 84.7 10.4 179 331-547 11-202 (332)
73 3igs_A N-acetylmannosamine-6-p 98.0 7.5E-05 2.6E-09 75.5 14.0 160 69-241 38-210 (232)
74 4ef8_A Dihydroorotate dehydrog 97.9 5.8E-05 2E-09 81.0 11.8 207 27-241 25-306 (354)
75 1f76_A Dihydroorotate dehydrog 97.8 6.8E-05 2.3E-09 79.4 10.8 194 38-241 42-318 (336)
76 1jub_A Dihydroorotate dehydrog 97.6 0.00027 9.1E-09 73.9 10.8 193 41-241 2-271 (311)
77 3b0p_A TRNA-dihydrouridine syn 97.6 0.00053 1.8E-08 73.3 13.1 183 55-241 2-225 (350)
78 3oix_A Putative dihydroorotate 97.5 0.00024 8.3E-09 75.9 10.2 198 38-241 35-304 (345)
79 4e38_A Keto-hydroxyglutarate-a 97.5 0.0001 3.6E-09 74.6 6.2 60 171-238 49-110 (232)
80 3zwt_A Dihydroorotate dehydrog 97.3 0.00077 2.6E-08 72.6 10.1 193 37-241 46-327 (367)
81 1wa3_A 2-keto-3-deoxy-6-phosph 97.2 0.0003 1E-08 68.8 5.9 61 172-241 26-89 (205)
82 1vhn_A Putative flavin oxidore 97.2 0.0026 8.8E-08 66.9 13.3 179 54-241 2-213 (318)
83 3q58_A N-acetylmannosamine-6-p 97.2 0.0012 4.2E-08 66.5 10.0 64 170-240 90-155 (229)
84 1vhc_A Putative KHG/KDPG aldol 97.2 0.011 3.7E-07 59.4 16.8 108 113-240 25-136 (224)
85 1ofd_A Ferredoxin-dependent gl 97.2 0.0011 3.8E-08 81.8 10.9 56 218-273 1036-1093(1520)
86 3igs_A N-acetylmannosamine-6-p 97.1 0.0019 6.5E-08 65.2 10.4 64 170-240 90-155 (232)
87 1y0e_A Putative N-acetylmannos 97.1 0.0014 4.9E-08 64.7 9.4 171 62-241 17-204 (223)
88 3lab_A Putative KDPG (2-keto-3 97.1 0.00054 1.8E-08 68.6 6.0 60 171-238 28-89 (217)
89 1yxy_A Putative N-acetylmannos 97.1 0.0031 1.1E-07 62.9 11.7 159 70-241 39-215 (234)
90 1wa3_A 2-keto-3-deoxy-6-phosph 97.1 0.014 4.7E-07 56.9 15.8 109 113-240 18-130 (205)
91 1mxs_A KDPG aldolase; 2-keto-3 97.1 0.012 4.2E-07 59.0 15.7 108 113-240 34-145 (225)
92 1vhc_A Putative KHG/KDPG aldol 97.0 0.001 3.5E-08 66.9 7.6 58 171-239 32-94 (224)
93 1wv2_A Thiazole moeity, thiazo 97.0 0.0092 3.2E-07 61.0 14.6 198 52-272 15-240 (265)
94 3i65_A Dihydroorotate dehydrog 97.0 0.0024 8.3E-08 69.7 10.7 84 158-241 269-374 (415)
95 1wbh_A KHG/KDPG aldolase; lyas 97.0 0.02 7E-07 56.9 16.6 108 113-240 24-135 (214)
96 2yw3_A 4-hydroxy-2-oxoglutarat 96.9 0.0046 1.6E-07 61.2 11.1 56 171-239 28-88 (207)
97 1wbh_A KHG/KDPG aldolase; lyas 96.9 0.0015 5E-08 65.3 7.1 60 171-241 31-95 (214)
98 1tv5_A Dhodehase, dihydroorota 96.8 0.0059 2E-07 67.3 11.6 82 160-241 300-402 (443)
99 3tjx_A Dihydroorotate dehydrog 96.7 0.0095 3.3E-07 63.5 12.6 40 36-80 32-71 (354)
100 3lab_A Putative KDPG (2-keto-3 96.7 0.014 4.7E-07 58.4 12.7 111 112-241 20-139 (217)
101 1mxs_A KDPG aldolase; 2-keto-3 96.7 0.0018 6.2E-08 65.1 6.1 58 171-239 41-103 (225)
102 1thf_D HISF protein; thermophI 96.7 0.0096 3.3E-07 59.8 11.3 66 171-241 33-103 (253)
103 1xm3_A Thiazole biosynthesis p 96.6 0.042 1.4E-06 56.2 16.1 182 51-241 7-207 (264)
104 3qja_A IGPS, indole-3-glycerol 96.6 0.015 5E-07 60.1 12.5 63 171-241 75-142 (272)
105 1h5y_A HISF; histidine biosynt 96.6 0.0087 3E-07 59.4 10.4 68 169-241 34-106 (253)
106 2y88_A Phosphoribosyl isomeras 96.5 0.0027 9.3E-08 63.5 6.1 66 170-241 33-103 (244)
107 4e38_A Keto-hydroxyglutarate-a 96.5 0.026 9E-07 56.9 13.3 102 120-240 50-153 (232)
108 1vzw_A Phosphoribosyl isomeras 96.4 0.0068 2.3E-07 60.7 8.5 65 171-241 35-104 (244)
109 3tdn_A FLR symmetric alpha-bet 96.3 0.0048 1.6E-07 62.1 6.5 66 169-241 36-108 (247)
110 1ka9_F Imidazole glycerol phos 96.2 0.029 1E-06 56.2 11.7 64 171-241 34-104 (252)
111 3nav_A Tryptophan synthase alp 96.2 0.012 4.2E-07 60.7 9.0 125 341-469 110-238 (271)
112 2v82_A 2-dehydro-3-deoxy-6-pho 96.2 0.14 4.9E-06 49.8 16.2 101 120-240 23-127 (212)
113 1y0e_A Putative N-acetylmannos 96.1 0.025 8.7E-07 55.6 10.3 27 443-469 179-205 (223)
114 3qja_A IGPS, indole-3-glycerol 96.0 0.021 7.2E-07 58.9 9.3 108 122-241 128-242 (272)
115 2yw3_A 4-hydroxy-2-oxoglutarat 95.9 0.032 1.1E-06 55.1 10.2 144 70-241 28-179 (207)
116 2htm_A Thiazole biosynthesis p 95.8 0.012 4.1E-07 60.3 6.6 199 52-272 8-231 (268)
117 1qo2_A Molecule: N-((5-phospho 95.6 0.03 1E-06 55.9 8.5 65 170-241 32-102 (241)
118 1yxy_A Putative N-acetylmannos 95.6 0.045 1.5E-06 54.4 9.6 66 171-241 39-108 (234)
119 4adt_A Pyridoxine biosynthetic 95.5 0.0033 1.1E-07 65.8 1.3 115 119-241 90-238 (297)
120 2nv1_A Pyridoxal biosynthesis 95.5 0.063 2.2E-06 55.9 10.9 72 158-238 20-104 (305)
121 3zen_D Fatty acid synthase; tr 95.3 0.034 1.2E-06 73.8 9.7 134 220-376 333-474 (3089)
122 3o07_A Pyridoxine biosynthesis 95.2 0.013 4.5E-07 60.4 4.3 128 119-263 80-242 (291)
123 1h1y_A D-ribulose-5-phosphate 95.1 0.1 3.4E-06 51.9 10.5 71 393-469 127-202 (228)
124 1pii_A N-(5'phosphoribosyl)ant 95.0 4.3 0.00015 44.6 24.1 281 121-468 122-427 (452)
125 1qop_A Tryptophan synthase alp 94.9 0.077 2.6E-06 54.3 9.2 132 332-469 94-235 (268)
126 1yad_A Regulatory protein TENI 94.9 0.55 1.9E-05 46.0 15.1 106 118-241 31-137 (221)
127 1o66_A 3-methyl-2-oxobutanoate 94.9 0.28 9.5E-06 50.6 13.2 27 162-188 18-44 (275)
128 1mzh_A Deoxyribose-phosphate a 94.8 0.016 5.5E-07 58.0 3.8 110 120-243 74-204 (225)
129 3vnd_A TSA, tryptophan synthas 94.8 0.042 1.4E-06 56.6 6.8 122 344-469 111-236 (267)
130 3tha_A Tryptophan synthase alp 94.7 0.066 2.2E-06 54.7 8.1 122 344-469 104-228 (252)
131 4adt_A Pyridoxine biosynthetic 94.6 0.23 8E-06 51.8 12.1 82 148-241 67-152 (297)
132 3tsm_A IGPS, indole-3-glycerol 94.6 0.11 3.6E-06 53.7 9.3 63 171-241 82-149 (272)
133 3vav_A 3-methyl-2-oxobutanoate 94.6 0.24 8.3E-06 51.1 11.9 76 162-241 30-126 (275)
134 1yad_A Regulatory protein TENI 94.5 0.08 2.7E-06 52.1 7.8 100 131-241 88-192 (221)
135 1vzw_A Phosphoribosyl isomeras 94.4 0.099 3.4E-06 52.1 8.6 121 107-241 77-222 (244)
136 3b0p_A TRNA-dihydrouridine syn 94.2 0.3 1E-05 52.0 12.2 70 397-469 152-226 (350)
137 3tsm_A IGPS, indole-3-glycerol 94.2 0.092 3.1E-06 54.2 7.8 109 121-241 134-249 (272)
138 1ea0_A Glutamate synthase [NAD 94.1 0.011 3.6E-07 73.2 0.6 294 290-663 818-1172(1479)
139 1tqj_A Ribulose-phosphate 3-ep 94.0 0.072 2.5E-06 53.3 6.5 176 217-469 12-202 (230)
140 2y88_A Phosphoribosyl isomeras 93.8 0.17 5.9E-06 50.2 8.9 121 107-241 76-225 (244)
141 1vc4_A Indole-3-glycerol phosp 93.6 0.43 1.5E-05 48.5 11.6 62 171-241 68-135 (254)
142 2v82_A 2-dehydro-3-deoxy-6-pho 93.6 0.081 2.8E-06 51.7 5.9 103 119-241 70-176 (212)
143 2ftp_A Hydroxymethylglutaryl-C 93.6 0.15 5.2E-06 53.0 8.2 100 172-278 34-140 (302)
144 1qo2_A Molecule: N-((5-phospho 93.5 0.093 3.2E-06 52.4 6.2 120 107-241 75-223 (241)
145 2zbt_A Pyridoxal biosynthesis 93.5 0.22 7.7E-06 51.3 9.2 84 149-240 68-151 (297)
146 2ekc_A AQ_1548, tryptophan syn 93.4 0.19 6.5E-06 51.2 8.5 127 332-469 94-235 (262)
147 1oy0_A Ketopantoate hydroxymet 93.4 3 0.0001 43.0 17.4 27 162-188 35-61 (281)
148 1jvn_A Glutamine, bifunctional 93.3 0.37 1.3E-05 54.5 11.4 64 171-241 455-526 (555)
149 1qap_A Quinolinic acid phospho 93.1 0.11 3.7E-06 54.3 6.1 83 147-241 195-280 (296)
150 2b7n_A Probable nicotinate-nuc 93.1 0.027 9.3E-07 58.1 1.6 84 148-241 169-257 (273)
151 1jvn_A Glutamine, bifunctional 93.0 0.24 8.2E-06 56.0 9.3 43 147-189 315-368 (555)
152 2w6r_A Imidazole glycerol phos 93.0 0.9 3.1E-05 45.6 12.7 128 332-469 74-230 (266)
153 1xi3_A Thiamine phosphate pyro 92.9 2.3 7.9E-05 40.9 15.2 103 120-241 30-135 (215)
154 2w6r_A Imidazole glycerol phos 92.8 0.6 2.1E-05 46.9 11.1 64 171-241 159-229 (266)
155 2tps_A Protein (thiamin phosph 92.7 0.74 2.5E-05 44.9 11.4 103 120-241 35-143 (227)
156 2uv8_G Fatty acid synthase sub 92.6 0.15 5.1E-06 65.5 7.5 45 333-377 590-637 (2051)
157 1thf_D HISF protein; thermophI 92.6 0.55 1.9E-05 46.7 10.4 120 107-241 76-224 (253)
158 1xi3_A Thiamine phosphate pyro 92.6 0.62 2.1E-05 45.0 10.4 104 124-241 81-190 (215)
159 3ngj_A Deoxyribose-phosphate a 92.5 0.15 5.2E-06 51.6 6.1 112 120-243 99-229 (239)
160 3f4w_A Putative hexulose 6 pho 92.5 0.89 3.1E-05 44.0 11.5 126 56-189 53-188 (211)
161 2cw6_A Hydroxymethylglutaryl-C 92.5 0.59 2E-05 48.4 10.7 101 172-277 31-136 (298)
162 1tqj_A Ribulose-phosphate 3-ep 92.4 0.12 4.1E-06 51.7 5.2 27 383-409 175-201 (230)
163 1rpx_A Protein (ribulose-phosp 92.4 0.77 2.6E-05 45.2 11.0 112 348-469 83-208 (230)
164 3nav_A Tryptophan synthase alp 92.2 0.37 1.3E-05 49.6 8.7 128 55-189 96-238 (271)
165 1ka9_F Imidazole glycerol phos 92.1 0.59 2E-05 46.5 9.8 64 171-241 155-225 (252)
166 3f4w_A Putative hexulose 6 pho 92.0 0.28 9.5E-06 47.6 7.2 109 348-469 69-188 (211)
167 3o63_A Probable thiamine-phosp 92.0 0.11 3.9E-06 52.5 4.5 99 131-241 112-219 (243)
168 1m3u_A 3-methyl-2-oxobutanoate 92.0 0.9 3.1E-05 46.6 11.1 27 162-188 18-44 (264)
169 3oa3_A Aldolase; structural ge 92.0 0.32 1.1E-05 50.4 7.8 113 120-241 130-261 (288)
170 1h5y_A HISF; histidine biosynt 91.3 0.76 2.6E-05 45.1 9.6 64 171-241 157-227 (253)
171 2jbm_A Nicotinate-nucleotide p 91.3 0.056 1.9E-06 56.5 1.3 83 148-241 184-272 (299)
172 1wv2_A Thiazole moeity, thiazo 91.2 1.2 4E-05 45.6 10.9 25 445-469 193-217 (265)
173 3gr7_A NADPH dehydrogenase; fl 91.1 1.1 3.7E-05 47.4 11.1 112 125-241 153-307 (340)
174 1ydo_A HMG-COA lyase; TIM-barr 91.1 0.3 1E-05 51.1 6.6 101 172-277 32-137 (307)
175 2p10_A MLL9387 protein; putati 90.8 6 0.00021 40.8 15.7 80 160-241 27-127 (286)
176 1nvm_A HOA, 4-hydroxy-2-oxoval 90.7 0.64 2.2E-05 49.2 8.9 92 171-277 33-135 (345)
177 1x1o_A Nicotinate-nucleotide p 90.7 0.54 1.9E-05 48.8 8.1 83 148-241 183-268 (286)
178 3r12_A Deoxyribose-phosphate a 90.6 1.4 4.7E-05 45.1 10.8 112 120-241 115-243 (260)
179 2fli_A Ribulose-phosphate 3-ep 90.6 1.5 5.1E-05 42.6 10.8 68 121-190 21-93 (220)
180 3c2e_A Nicotinate-nucleotide p 90.5 0.14 4.6E-06 53.5 3.4 91 147-241 185-277 (294)
181 2tps_A Protein (thiamin phosph 90.5 0.29 1E-05 47.9 5.6 95 131-241 94-200 (227)
182 3o07_A Pyridoxine biosynthesis 90.3 0.42 1.4E-05 49.3 6.7 21 221-241 18-38 (291)
183 1rd5_A Tryptophan synthase alp 90.3 1.1 3.6E-05 45.3 9.7 111 352-469 114-231 (262)
184 3noy_A 4-hydroxy-3-methylbut-2 90.2 1.1 3.8E-05 47.7 9.9 138 120-310 50-190 (366)
185 1rd5_A Tryptophan synthase alp 90.2 0.59 2E-05 47.2 7.7 110 125-241 114-230 (262)
186 1ep3_A Dihydroorotate dehydrog 89.9 0.44 1.5E-05 49.0 6.7 90 313-409 3-132 (311)
187 1ujp_A Tryptophan synthase alp 89.9 0.19 6.4E-06 51.7 3.7 134 331-469 90-230 (271)
188 3tdn_A FLR symmetric alpha-bet 89.8 0.1 3.5E-06 52.3 1.6 64 171-241 159-229 (247)
189 3vnd_A TSA, tryptophan synthas 89.8 0.83 2.8E-05 46.9 8.5 114 121-241 115-235 (267)
190 1ydn_A Hydroxymethylglutaryl-C 89.7 1.8 6.1E-05 44.5 11.0 103 172-278 30-136 (295)
191 3hgj_A Chromate reductase; TIM 89.6 1.8 6.2E-05 45.8 11.2 113 125-241 161-318 (349)
192 3glc_A Aldolase LSRF; TIM barr 88.9 1.7 5.9E-05 45.2 10.2 47 226-280 130-176 (295)
193 3l5l_A Xenobiotic reductase A; 88.6 1.7 5.9E-05 46.2 10.3 113 125-241 167-325 (363)
194 1viz_A PCRB protein homolog; s 88.5 1.3 4.4E-05 44.8 8.7 69 222-309 21-89 (240)
195 3tqv_A Nicotinate-nucleotide p 88.1 0.79 2.7E-05 47.5 6.9 83 147-241 185-270 (287)
196 1z41_A YQJM, probable NADH-dep 88.0 2.1 7E-05 45.1 10.2 113 124-241 152-307 (338)
197 3paj_A Nicotinate-nucleotide p 87.9 0.41 1.4E-05 50.4 4.6 83 147-241 218-303 (320)
198 1z41_A YQJM, probable NADH-dep 87.6 2.2 7.7E-05 44.8 10.2 68 398-469 238-308 (338)
199 1qop_A Tryptophan synthase alp 87.2 0.91 3.1E-05 46.2 6.8 114 120-241 113-234 (268)
200 2fli_A Ribulose-phosphate 3-ep 87.2 2.2 7.7E-05 41.3 9.4 26 443-469 174-199 (220)
201 2f6u_A GGGPS, (S)-3-O-geranylg 87.1 2.1 7.1E-05 43.1 9.1 47 222-281 21-67 (234)
202 1jub_A Dihydroorotate dehydrog 86.8 1 3.5E-05 46.5 6.9 26 443-469 246-272 (311)
203 4gj1_A 1-(5-phosphoribosyl)-5- 86.7 1.2 4.1E-05 44.8 7.2 77 171-268 34-118 (243)
204 1o4u_A Type II quinolic acid p 86.6 0.12 4.3E-06 53.5 -0.1 84 147-241 179-268 (285)
205 1ub3_A Aldolase protein; schif 86.6 0.64 2.2E-05 46.4 5.1 114 120-243 75-205 (220)
206 3ndo_A Deoxyribose-phosphate a 86.6 0.77 2.6E-05 46.2 5.7 110 121-242 85-218 (231)
207 3l0g_A Nicotinate-nucleotide p 86.4 1.2 3.9E-05 46.5 7.0 83 147-241 194-279 (300)
208 2e6f_A Dihydroorotate dehydrog 85.9 0.48 1.6E-05 49.1 3.9 25 444-469 249-274 (314)
209 1n7k_A Deoxyribose-phosphate a 85.9 0.81 2.8E-05 46.1 5.4 62 172-242 152-220 (234)
210 3gnn_A Nicotinate-nucleotide p 85.8 0.29 1E-05 51.0 2.2 83 147-241 196-281 (298)
211 1qpo_A Quinolinate acid phosph 85.7 0.34 1.2E-05 50.2 2.6 83 147-241 181-269 (284)
212 2nv1_A Pyridoxal biosynthesis 85.4 0.86 2.9E-05 47.2 5.5 75 167-241 131-238 (305)
213 1xm3_A Thiazole biosynthesis p 85.0 0.88 3E-05 46.3 5.3 111 348-469 84-208 (264)
214 1ujp_A Tryptophan synthase alp 85.0 1.6 5.6E-05 44.7 7.3 112 120-241 110-229 (271)
215 1gte_A Dihydropyrimidine dehyd 84.6 3.7 0.00013 49.6 11.3 27 443-469 791-817 (1025)
216 1vyr_A Pentaerythritol tetrani 84.6 4.3 0.00015 43.2 10.6 108 125-241 170-323 (364)
217 3cu2_A Ribulose-5-phosphate 3- 84.5 1.8 6.2E-05 43.5 7.2 27 383-409 189-217 (237)
218 3o63_A Probable thiamine-phosp 84.1 4.1 0.00014 41.0 9.7 72 391-469 144-220 (243)
219 2ekc_A AQ_1548, tryptophan syn 84.1 4.7 0.00016 40.8 10.3 124 56-188 94-234 (262)
220 1i4n_A Indole-3-glycerol phosp 84.0 3.7 0.00013 41.7 9.3 107 122-241 116-230 (251)
221 2gou_A Oxidoreductase, FMN-bin 83.9 3.5 0.00012 43.9 9.6 108 125-241 170-322 (365)
222 1f76_A Dihydroorotate dehydrog 83.7 1.1 3.7E-05 46.9 5.5 27 443-469 293-319 (336)
223 2qjg_A Putative aldolase MJ040 83.7 1.7 5.9E-05 43.8 6.8 167 55-241 32-237 (273)
224 1geq_A Tryptophan synthase alp 83.7 4.2 0.00014 40.2 9.5 112 120-241 99-220 (248)
225 1vyr_A Pentaerythritol tetrani 83.6 6.5 0.00022 41.8 11.6 61 398-469 260-324 (364)
226 2p10_A MLL9387 protein; putati 83.5 0.96 3.3E-05 46.7 4.8 93 146-241 151-259 (286)
227 3ble_A Citramalate synthase fr 83.5 1.6 5.6E-05 46.0 6.8 51 225-276 100-151 (337)
228 2zbt_A Pyridoxal biosynthesis 83.4 2.7 9.4E-05 43.0 8.3 171 55-241 20-238 (297)
229 2htm_A Thiazole biosynthesis p 83.3 2.8 9.7E-05 42.9 8.0 27 443-469 182-208 (268)
230 1vhn_A Putative flavin oxidore 82.8 9.7 0.00033 39.4 12.3 63 397-469 148-214 (318)
231 2yzr_A Pyridoxal biosynthesis 82.5 3.1 0.00011 43.9 8.2 25 445-469 248-272 (330)
232 1vc4_A Indole-3-glycerol phosp 82.3 1 3.4E-05 45.8 4.3 108 120-241 119-236 (254)
233 3vk5_A MOEO5; TIM barrel, tran 82.1 0.62 2.1E-05 48.2 2.7 58 174-241 192-256 (286)
234 3ajx_A 3-hexulose-6-phosphate 81.1 5.6 0.00019 38.1 9.0 109 348-469 69-187 (207)
235 3ctl_A D-allulose-6-phosphate 80.9 4 0.00014 40.8 8.1 111 348-468 72-195 (231)
236 2b7n_A Probable nicotinate-nuc 80.5 2.2 7.4E-05 43.8 6.1 68 118-189 191-258 (273)
237 2yzr_A Pyridoxal biosynthesis 80.4 0.98 3.4E-05 47.6 3.5 24 218-241 248-271 (330)
238 1ps9_A 2,4-dienoyl-COA reducta 80.4 6.6 0.00022 44.9 10.8 35 434-468 273-310 (671)
239 3ovp_A Ribulose-phosphate 3-ep 80.4 3.7 0.00013 40.9 7.6 111 349-469 80-198 (228)
240 1qpo_A Quinolinate acid phosph 79.9 3 0.0001 43.1 7.0 68 118-189 203-270 (284)
241 2r14_A Morphinone reductase; H 79.9 9 0.00031 41.0 11.0 64 172-241 259-328 (377)
242 4a29_A Engineered retro-aldol 79.5 21 0.00072 36.3 12.9 101 131-241 126-233 (258)
243 1o4u_A Type II quinolic acid p 79.3 1.5 5.2E-05 45.4 4.5 69 117-189 201-269 (285)
244 4a29_A Engineered retro-aldol 79.3 4.6 0.00016 41.1 7.9 52 358-409 177-233 (258)
245 3gka_A N-ethylmaleimide reduct 79.1 15 0.0005 39.2 12.2 102 125-241 170-316 (361)
246 3jr2_A Hexulose-6-phosphate sy 77.6 0.86 2.9E-05 44.8 2.0 109 121-241 75-194 (218)
247 3ivs_A Homocitrate synthase, m 77.3 8.7 0.0003 41.9 10.0 95 172-276 65-165 (423)
248 1ps9_A 2,4-dienoyl-COA reducta 77.2 6.7 0.00023 44.8 9.6 115 125-241 150-310 (671)
249 2f6u_A GGGPS, (S)-3-O-geranylg 77.2 0.53 1.8E-05 47.5 0.3 61 170-241 147-218 (234)
250 2ztj_A Homocitrate synthase; ( 77.2 7.4 0.00025 41.7 9.3 92 172-275 29-127 (382)
251 3hgj_A Chromate reductase; TIM 77.1 11 0.00039 39.6 10.7 73 113-187 235-317 (349)
252 3kru_A NADH:flavin oxidoreduct 76.9 9.3 0.00032 40.3 9.9 111 125-241 152-307 (343)
253 4ab4_A Xenobiotic reductase B; 76.9 14 0.00049 39.2 11.4 57 172-241 246-308 (362)
254 1tv5_A Dhodehase, dihydroorota 76.0 4.7 0.00016 44.2 7.5 41 37-84 78-118 (443)
255 3iwp_A Copper homeostasis prot 75.8 6.2 0.00021 40.8 7.8 72 168-242 46-132 (287)
256 3tha_A Tryptophan synthase alp 75.3 6.3 0.00021 40.0 7.7 124 57-189 89-228 (252)
257 3eeg_A 2-isopropylmalate synth 74.9 4.6 0.00016 42.4 6.8 53 222-275 78-135 (325)
258 3nvt_A 3-deoxy-D-arabino-heptu 74.6 26 0.00089 37.6 12.7 51 225-280 160-211 (385)
259 1icp_A OPR1, 12-oxophytodienoa 74.4 15 0.00052 39.1 10.8 66 171-241 259-330 (376)
260 1viz_A PCRB protein homolog; s 74.2 0.94 3.2E-05 45.8 1.2 60 171-241 141-210 (240)
261 3inp_A D-ribulose-phosphate 3- 73.9 4 0.00014 41.3 5.8 113 347-469 100-224 (246)
262 1tqx_A D-ribulose-5-phosphate 73.5 3.2 0.00011 41.4 4.9 71 393-469 128-202 (227)
263 3gka_A N-ethylmaleimide reduct 73.4 17 0.00058 38.6 10.8 22 224-245 164-185 (361)
264 3ceu_A Thiamine phosphate pyro 72.9 12 0.00042 36.1 9.0 26 443-469 148-173 (210)
265 2yxb_A Coenzyme B12-dependent 72.9 5.7 0.00019 37.3 6.2 87 347-465 36-125 (161)
266 4ab4_A Xenobiotic reductase B; 72.8 19 0.00064 38.4 11.0 22 224-245 156-177 (362)
267 2jbm_A Nicotinate-nucleotide p 72.7 4.9 0.00017 41.7 6.3 67 119-189 207-273 (299)
268 2h6r_A Triosephosphate isomera 72.5 15 0.00053 36.0 9.6 113 124-241 77-199 (219)
269 1pii_A N-(5'phosphoribosyl)ant 72.5 3.3 0.00011 45.5 5.2 28 381-409 209-236 (452)
270 4hb7_A Dihydropteroate synthas 72.2 4.2 0.00014 41.8 5.5 69 395-465 36-105 (270)
271 3gnn_A Nicotinate-nucleotide p 71.5 7.5 0.00025 40.5 7.3 66 117-189 217-282 (298)
272 1n7k_A Deoxyribose-phosphate a 71.3 14 0.00048 37.0 9.0 43 225-276 92-134 (234)
273 1p1x_A Deoxyribose-phosphate a 71.1 0.71 2.4E-05 47.3 -0.6 117 120-242 89-238 (260)
274 1h1y_A D-ribulose-5-phosphate 71.0 4.4 0.00015 39.9 5.3 108 122-241 80-201 (228)
275 3paj_A Nicotinate-nucleotide p 70.5 7.7 0.00026 40.7 7.2 65 118-189 240-304 (320)
276 3zwt_A Dihydroorotate dehydrog 70.2 6.1 0.00021 42.2 6.5 26 443-469 302-328 (367)
277 3ovp_A Ribulose-phosphate 3-ep 69.4 3.4 0.00012 41.1 4.0 109 72-189 79-198 (228)
278 2agk_A 1-(5-phosphoribosyl)-5- 69.3 29 0.001 34.9 11.1 77 171-271 41-125 (260)
279 1icp_A OPR1, 12-oxophytodienoa 69.1 26 0.00088 37.4 11.1 22 224-245 170-191 (376)
280 1w8s_A FBP aldolase, fructose- 69.0 1.9 6.4E-05 43.9 2.1 55 174-241 165-231 (263)
281 3vk5_A MOEO5; TIM barrel, tran 68.8 5.7 0.00019 41.0 5.6 57 131-189 199-257 (286)
282 1vcv_A Probable deoxyribose-ph 68.6 3.2 0.00011 41.5 3.6 115 120-243 71-220 (226)
283 3nl6_A Thiamine biosynthetic b 68.1 73 0.0025 35.6 15.0 104 119-241 28-138 (540)
284 3i65_A Dihydroorotate dehydrog 68.1 4.5 0.00015 44.0 4.9 27 443-469 349-375 (415)
285 3nl6_A Thiamine biosynthetic b 67.9 6.9 0.00023 44.0 6.5 195 131-376 85-305 (540)
286 2r14_A Morphinone reductase; H 67.8 30 0.001 36.9 11.3 22 224-245 169-190 (377)
287 3ceu_A Thiamine phosphate pyro 67.5 5 0.00017 39.0 4.7 77 162-241 89-172 (210)
288 1geq_A Tryptophan synthase alp 66.9 43 0.0015 32.7 11.6 45 145-189 177-221 (248)
289 1to3_A Putative aldolase YIHT; 66.7 12 0.00042 38.8 7.7 49 225-280 112-160 (304)
290 1x1o_A Nicotinate-nucleotide p 65.4 3.8 0.00013 42.4 3.5 65 391-469 205-269 (286)
291 3l5a_A NADH/flavin oxidoreduct 65.2 15 0.0005 39.9 8.3 70 171-241 267-346 (419)
292 1i4n_A Indole-3-glycerol phosp 64.9 19 0.00066 36.4 8.6 42 367-409 189-230 (251)
293 2a4a_A Deoxyribose-phosphate a 63.6 1.4 4.8E-05 45.5 -0.1 64 173-242 177-265 (281)
294 1o94_A Tmadh, trimethylamine d 63.5 23 0.00079 40.8 10.1 110 131-241 162-321 (729)
295 3l0g_A Nicotinate-nucleotide p 63.4 15 0.0005 38.3 7.4 77 343-422 214-290 (300)
296 2xij_A Methylmalonyl-COA mutas 62.6 9.7 0.00033 44.5 6.6 91 348-473 623-715 (762)
297 1nsj_A PRAI, phosphoribosyl an 61.8 1.2E+02 0.0041 29.4 13.9 155 68-241 10-180 (205)
298 3vzx_A Heptaprenylglyceryl pho 61.5 4.2 0.00014 40.7 2.9 51 180-241 152-208 (228)
299 1tqx_A D-ribulose-5-phosphate 61.3 8.1 0.00028 38.4 5.0 69 120-189 128-202 (227)
300 3gr7_A NADPH dehydrogenase; fl 61.3 28 0.00095 36.5 9.4 72 114-187 226-306 (340)
301 1req_A Methylmalonyl-COA mutas 60.4 7.3 0.00025 45.3 5.0 91 348-473 615-707 (727)
302 3tqv_A Nicotinate-nucleotide p 60.1 12 0.00042 38.6 6.1 64 118-188 207-270 (287)
303 3l5a_A NADH/flavin oxidoreduct 60.0 45 0.0015 36.1 11.0 69 398-469 273-347 (419)
304 1rqb_A Transcarboxylase 5S sub 59.9 27 0.00092 39.2 9.4 40 224-277 120-159 (539)
305 2hsa_B 12-oxophytodienoate red 59.8 21 0.00073 38.4 8.3 112 125-241 180-348 (402)
306 3ngj_A Deoxyribose-phosphate a 59.5 32 0.0011 34.5 9.0 151 19-185 55-226 (239)
307 2wqp_A Polysialic acid capsule 59.5 34 0.0012 36.3 9.6 166 225-465 39-233 (349)
308 3w01_A Heptaprenylglyceryl pho 58.8 9.2 0.00031 38.4 4.8 56 131-189 159-215 (235)
309 2vp8_A Dihydropteroate synthas 58.6 6.3 0.00021 41.4 3.7 67 396-465 72-141 (318)
310 3jr2_A Hexulose-6-phosphate sy 57.3 49 0.0017 31.9 9.8 110 71-189 74-195 (218)
311 1zco_A 2-dehydro-3-deoxyphosph 56.6 85 0.0029 31.7 11.7 18 225-242 41-58 (262)
312 1ccw_A Protein (glutamate muta 56.4 18 0.00062 32.7 6.1 30 347-376 21-52 (137)
313 3cu2_A Ribulose-5-phosphate 3- 56.2 14 0.00047 37.0 5.7 114 70-189 82-218 (237)
314 2h6r_A Triosephosphate isomera 56.1 15 0.00053 35.9 6.0 128 332-469 53-200 (219)
315 3ajx_A 3-hexulose-6-phosphate 56.0 1E+02 0.0035 29.0 11.7 126 56-189 53-187 (207)
316 3ble_A Citramalate synthase fr 55.9 50 0.0017 34.5 10.2 88 122-233 175-268 (337)
317 3vzx_A Heptaprenylglyceryl pho 55.6 12 0.0004 37.4 5.0 56 131-189 153-209 (228)
318 1xg4_A Probable methylisocitra 55.5 21 0.00073 36.9 7.1 193 149-468 7-235 (295)
319 2ftp_A Hydroxymethylglutaryl-C 54.9 56 0.0019 33.4 10.3 92 122-233 165-264 (302)
320 3k30_A Histamine dehydrogenase 54.3 37 0.0013 38.7 9.6 112 125-241 165-324 (690)
321 2agk_A 1-(5-phosphoribosyl)-5- 53.1 9.4 0.00032 38.6 3.9 64 172-241 162-236 (260)
322 2y5s_A DHPS, dihydropteroate s 52.4 13 0.00044 38.6 4.8 65 396-466 53-122 (294)
323 1eye_A DHPS 1, dihydropteroate 51.6 16 0.00053 37.6 5.3 66 396-467 36-106 (280)
324 2nx9_A Oxaloacetate decarboxyl 51.6 48 0.0016 36.5 9.5 40 224-277 103-142 (464)
325 1vr6_A Phospho-2-dehydro-3-deo 50.8 2E+02 0.0068 30.3 13.8 16 454-469 295-311 (350)
326 1vli_A Spore coat polysacchari 50.6 1.1E+02 0.0038 32.7 11.9 166 225-465 48-245 (385)
327 3kts_A Glycerol uptake operon 49.3 12 0.00041 36.4 3.8 47 138-187 132-178 (192)
328 1qap_A Quinolinic acid phospho 48.6 42 0.0014 34.7 8.0 64 345-409 217-280 (296)
329 3ewb_X 2-isopropylmalate synth 48.1 78 0.0027 32.4 10.0 104 364-469 113-230 (293)
330 3bg3_A Pyruvate carboxylase, m 47.9 78 0.0027 36.7 10.9 89 121-233 266-360 (718)
331 1vs1_A 3-deoxy-7-phosphoheptul 47.2 2.4E+02 0.0083 28.6 13.5 50 226-280 57-107 (276)
332 1aj0_A DHPS, dihydropteroate s 46.7 18 0.00061 37.2 4.8 86 358-465 18-114 (282)
333 3bg3_A Pyruvate carboxylase, m 46.2 69 0.0023 37.2 10.1 39 224-276 200-238 (718)
334 3aty_A Tcoye, prostaglandin F2 46.1 10 0.00035 40.6 2.9 62 171-241 269-336 (379)
335 3inp_A D-ribulose-phosphate 3- 46.0 8.9 0.0003 38.7 2.3 45 145-189 176-224 (246)
336 3ctl_A D-allulose-6-phosphate 45.5 16 0.00054 36.4 4.1 110 72-188 72-195 (231)
337 1nvm_A HOA, 4-hydroxy-2-oxoval 45.1 1.4E+02 0.0049 31.0 11.7 106 122-272 155-268 (345)
338 2cw6_A Hydroxymethylglutaryl-C 44.9 1.4E+02 0.0047 30.3 11.3 113 121-273 161-281 (298)
339 3vav_A 3-methyl-2-oxobutanoate 44.8 15 0.00051 37.8 3.8 61 120-189 110-194 (275)
340 2qf7_A Pyruvate carboxylase pr 44.6 3.2E+02 0.011 33.4 16.2 163 149-480 613-794 (1165)
341 2vef_A Dihydropteroate synthas 44.5 15 0.00051 38.4 3.9 66 396-466 40-110 (314)
342 2vc6_A MOSA, dihydrodipicolina 44.5 1.1E+02 0.0038 31.0 10.5 168 222-468 22-205 (292)
343 3kru_A NADH:flavin oxidoreduct 44.2 49 0.0017 34.8 7.8 71 115-187 228-306 (343)
344 3cwo_X Beta/alpha-barrel prote 44.0 57 0.0019 30.6 7.8 124 332-469 55-204 (237)
345 3w01_A Heptaprenylglyceryl pho 43.3 12 0.0004 37.7 2.7 24 217-241 191-214 (235)
346 1mzh_A Deoxyribose-phosphate a 43.2 43 0.0015 32.8 6.8 72 112-185 127-201 (225)
347 3r12_A Deoxyribose-phosphate a 42.7 51 0.0018 33.5 7.4 70 114-185 170-242 (260)
348 1ydn_A Hydroxymethylglutaryl-C 42.0 1.3E+02 0.0044 30.4 10.4 113 122-273 161-280 (295)
349 1rqb_A Transcarboxylase 5S sub 41.9 75 0.0026 35.6 9.2 90 120-233 179-275 (539)
350 3glc_A Aldolase LSRF; TIM barr 41.6 33 0.0011 35.5 5.9 55 173-241 194-257 (295)
351 3tr9_A Dihydropteroate synthas 41.5 28 0.00096 36.4 5.3 69 396-465 56-129 (314)
352 3noy_A 4-hydroxy-3-methylbut-2 40.9 34 0.0012 36.4 5.9 61 170-241 48-112 (366)
353 3c2e_A Nicotinate-nucleotide p 40.9 16 0.00056 37.7 3.5 66 120-189 210-278 (294)
354 1ydo_A HMG-COA lyase; TIM-barr 40.8 1E+02 0.0034 31.8 9.5 113 121-272 162-281 (307)
355 2vws_A YFAU, 2-keto-3-deoxy su 40.7 75 0.0026 32.0 8.4 70 165-239 23-95 (267)
356 3ih1_A Methylisocitrate lyase; 40.4 2.1E+02 0.007 29.6 11.7 131 120-274 108-264 (305)
357 2czd_A Orotidine 5'-phosphate 39.7 1E+02 0.0035 29.4 8.8 108 340-469 61-186 (208)
358 3oa3_A Aldolase; structural ge 39.6 88 0.003 32.2 8.6 70 114-185 185-260 (288)
359 3ezx_A MMCP 1, monomethylamine 39.0 31 0.0011 33.7 5.0 31 347-377 110-142 (215)
360 1o66_A 3-methyl-2-oxobutanoate 38.9 27 0.00093 35.8 4.7 64 120-189 99-182 (275)
361 1v5x_A PRA isomerase, phosphor 38.9 2.7E+02 0.0093 26.8 13.6 108 345-469 63-175 (203)
362 4gj1_A 1-(5-phosphoribosyl)-5- 38.3 26 0.00087 35.0 4.3 43 147-189 63-105 (243)
363 3ndo_A Deoxyribose-phosphate a 38.1 64 0.0022 32.1 7.2 69 115-185 144-216 (231)
364 2nx9_A Oxaloacetate decarboxyl 37.7 1.7E+02 0.0057 32.1 11.0 89 120-233 162-256 (464)
365 1xky_A Dihydrodipicolinate syn 36.7 1.1E+02 0.0039 31.1 9.1 77 225-308 37-119 (301)
366 2qiw_A PEP phosphonomutase; st 36.5 21 0.00072 36.1 3.4 75 162-241 21-113 (255)
367 2dqw_A Dihydropteroate synthas 36.4 3.7E+02 0.013 27.5 12.9 62 119-185 55-127 (294)
368 2yxb_A Coenzyme B12-dependent 36.0 1.7E+02 0.0057 27.0 9.4 89 70-187 35-127 (161)
369 1to3_A Putative aldolase YIHT; 35.1 39 0.0013 34.9 5.2 60 172-241 181-254 (304)
370 3hbl_A Pyruvate carboxylase; T 35.0 5.5E+02 0.019 31.3 16.0 163 149-480 595-777 (1150)
371 3exr_A RMPD (hexulose-6-phosph 34.8 43 0.0015 32.8 5.3 109 348-469 74-197 (221)
372 2v5j_A 2,4-dihydroxyhept-2-ENE 34.2 1.1E+02 0.0039 31.1 8.6 70 164-239 43-116 (287)
373 1m3u_A 3-methyl-2-oxobutanoate 34.1 30 0.001 35.3 4.0 64 120-189 98-182 (264)
374 3qze_A DHDPS, dihydrodipicolin 34.0 2.4E+02 0.0081 29.0 11.1 77 225-308 48-130 (314)
375 1oy0_A Ketopantoate hydroxymet 33.9 30 0.001 35.6 4.1 63 121-189 117-200 (281)
376 3fok_A Uncharacterized protein 33.8 31 0.0011 35.9 4.2 47 226-280 133-181 (307)
377 4e7p_A Response regulator; DNA 33.6 72 0.0025 27.7 6.2 65 168-239 52-121 (150)
378 3kts_A Glycerol uptake operon 33.5 18 0.00062 35.2 2.2 27 215-241 151-179 (192)
379 3rmj_A 2-isopropylmalate synth 33.4 4.5E+02 0.015 27.6 16.0 70 114-186 31-105 (370)
380 2bmb_A Folic acid synthesis pr 32.9 38 0.0013 38.0 5.0 69 396-466 256-336 (545)
381 1rpx_A Protein (ribulose-phosp 32.6 23 0.00078 34.5 2.8 59 131-189 140-208 (230)
382 3rmj_A 2-isopropylmalate synth 32.6 2.6E+02 0.009 29.5 11.3 87 121-231 162-257 (370)
383 3l5l_A Xenobiotic reductase A; 32.6 69 0.0023 33.7 6.8 64 122-187 252-324 (363)
384 1w0m_A TIM, triosephosphate is 31.5 1.4E+02 0.0047 29.5 8.4 105 131-241 85-202 (226)
385 1nsj_A PRAI, phosphoribosyl an 31.5 1.3E+02 0.0045 29.1 8.1 67 343-409 9-83 (205)
386 3h5d_A DHDPS, dihydrodipicolin 31.5 2.5E+02 0.0084 28.8 10.7 78 224-307 31-114 (311)
387 3daq_A DHDPS, dihydrodipicolin 31.5 3E+02 0.01 27.8 11.2 121 224-409 26-162 (292)
388 1hg3_A Triosephosphate isomera 31.1 1.4E+02 0.0048 29.4 8.3 104 131-241 88-205 (225)
389 4hb7_A Dihydropteroate synthas 31.1 19 0.00064 36.9 2.0 64 172-238 34-105 (270)
390 1v5x_A PRA isomerase, phosphor 31.0 1.5E+02 0.0051 28.7 8.4 67 343-409 8-82 (203)
391 1eye_A DHPS 1, dihydropteroate 30.6 32 0.0011 35.3 3.6 64 172-238 33-104 (280)
392 2oz8_A MLL7089 protein; struct 30.3 1.9E+02 0.0065 30.4 9.9 134 115-280 145-295 (389)
393 3eeg_A 2-isopropylmalate synth 29.9 2.2E+02 0.0075 29.4 10.0 87 121-231 156-251 (325)
394 3ewb_X 2-isopropylmalate synth 29.8 3.3E+02 0.011 27.6 11.3 86 122-231 156-250 (293)
395 3eul_A Possible nitrate/nitrit 29.8 77 0.0027 27.4 5.7 64 168-238 47-115 (152)
396 2xij_A Methylmalonyl-COA mutas 29.8 3E+02 0.01 32.2 11.8 63 122-186 648-712 (762)
397 3sz8_A 2-dehydro-3-deoxyphosph 29.8 1.7E+02 0.0059 29.9 9.0 13 330-342 89-101 (285)
398 3qz6_A HPCH/HPAI aldolase; str 29.3 88 0.003 31.4 6.6 67 169-240 25-94 (261)
399 2i1o_A Nicotinate phosphoribos 28.1 1.3E+02 0.0046 32.2 8.1 68 340-409 217-298 (398)
400 2ovl_A Putative racemase; stru 28.0 3.3E+02 0.011 28.2 11.1 138 115-279 146-297 (371)
401 4eiv_A Deoxyribose-phosphate a 27.9 49 0.0017 34.2 4.4 25 217-241 236-270 (297)
402 2gou_A Oxidoreductase, FMN-bin 27.5 1.1E+02 0.0036 32.3 7.2 63 122-187 256-321 (365)
403 3cwo_X Beta/alpha-barrel prote 27.1 93 0.0032 29.1 6.1 64 171-241 133-203 (237)
404 3b2n_A Uncharacterized protein 26.9 1E+02 0.0036 25.9 5.9 64 168-238 35-103 (133)
405 1q6o_A Humps, 3-keto-L-gulonat 26.3 34 0.0012 33.0 2.8 108 122-241 73-191 (216)
406 1izc_A Macrophomate synthase i 25.6 1.1E+02 0.0038 32.1 6.8 31 164-194 46-76 (339)
407 4a3u_A NCR, NADH\:flavin oxido 25.5 3.6E+02 0.012 28.0 10.9 126 114-241 142-315 (358)
408 3qz6_A HPCH/HPAI aldolase; str 25.3 53 0.0018 33.1 4.1 69 390-469 25-96 (261)
409 3kht_A Response regulator; PSI 25.3 1.4E+02 0.0049 25.3 6.6 63 169-238 38-107 (144)
410 2dqw_A Dihydropteroate synthas 24.8 35 0.0012 35.3 2.6 65 171-238 55-127 (294)
411 2i2x_B MTAC, methyltransferase 24.4 87 0.003 31.2 5.5 28 348-375 142-171 (258)
412 1vkf_A Glycerol uptake operon 24.3 37 0.0013 32.9 2.6 24 217-241 154-177 (188)
413 2qkf_A 3-deoxy-D-manno-octulos 23.9 2.7E+02 0.0093 28.2 9.2 15 330-344 84-98 (280)
414 2y5s_A DHPS, dihydropteroate s 23.6 34 0.0012 35.3 2.3 65 171-238 49-121 (294)
415 1o60_A 2-dehydro-3-deoxyphosph 23.5 3.2E+02 0.011 27.9 9.7 15 329-343 86-100 (292)
416 1twd_A Copper homeostasis prot 23.2 5.8E+02 0.02 25.6 17.4 162 168-408 8-197 (256)
417 3k30_A Histamine dehydrogenase 23.1 78 0.0027 36.0 5.4 38 431-468 284-324 (690)
418 3na8_A Putative dihydrodipicol 22.8 4.1E+02 0.014 27.2 10.5 39 225-269 49-87 (315)
419 1tx2_A DHPS, dihydropteroate s 22.6 6.3E+02 0.021 25.8 12.8 62 120-185 67-139 (297)
420 3ozy_A Putative mandelate race 22.5 6.8E+02 0.023 26.1 12.5 139 114-280 150-303 (389)
421 1mdl_A Mandelate racemase; iso 22.3 6E+02 0.021 25.9 11.8 134 120-280 150-296 (359)
422 2hjp_A Phosphonopyruvate hydro 22.3 69 0.0023 33.0 4.3 89 149-240 5-109 (290)
423 1y80_A Predicted cobalamin bin 22.0 1.4E+02 0.0047 28.5 6.2 29 347-375 106-136 (210)
424 1nmo_A Hypothetical protein YB 22.0 59 0.002 32.4 3.7 79 331-409 89-193 (247)
425 1ub3_A Aldolase protein; schif 21.9 1.8E+02 0.0063 28.4 7.2 69 114-185 130-202 (220)
426 3exr_A RMPD (hexulose-6-phosph 21.8 1.6E+02 0.0054 28.7 6.7 114 71-189 73-197 (221)
427 4ef8_A Dihydroorotate dehydrog 21.7 72 0.0025 33.7 4.5 42 148-189 265-307 (354)
428 1xky_A Dihydrodipicolinate syn 21.1 48 0.0016 34.0 2.8 66 171-241 36-114 (301)
429 2hmc_A AGR_L_411P, dihydrodipi 20.8 5.3E+02 0.018 26.8 10.9 37 225-267 51-87 (344)
430 3e96_A Dihydrodipicolinate syn 20.8 3.6E+02 0.012 27.6 9.5 122 225-358 37-163 (316)
431 3tjx_A Dihydroorotate dehydrog 20.8 74 0.0025 33.2 4.3 42 148-189 265-307 (354)
432 3fs2_A 2-dehydro-3-deoxyphosph 20.5 2.9E+02 0.0099 28.5 8.5 13 330-342 110-122 (298)
433 1vlj_A NADH-dependent butanol 20.5 1.6E+02 0.0053 31.4 6.8 23 225-248 92-114 (407)
434 3cz5_A Two-component response 20.3 1.6E+02 0.0053 25.4 5.8 66 167-239 36-106 (153)
435 2i1o_A Nicotinate phosphoribos 20.3 1.9E+02 0.0065 31.0 7.4 59 131-189 236-299 (398)
No 1
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=100.00 E-value=1.5e-75 Score=645.82 Aligned_cols=393 Identities=30% Similarity=0.437 Sum_probs=289.6
Q ss_pred cCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHHHHH
Q psy3862 17 IKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKA 96 (671)
Q Consensus 17 ~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Eeq~~ 96 (671)
.+||||||+|+|++++++| ++|||+|+|| ++++|++||++++||+||+.+||+|||++||||+||+||++|+|++
T Consensus 58 ~GLTfDDVlLvP~~s~v~p-~~Vdl~t~lt----~~i~L~iPlvSA~MDTVTe~~MAIamAr~GGiGvIH~n~sie~Qa~ 132 (556)
T 4af0_A 58 GGLTYNDFLVLPGHINFPA-SDVSLQSKAT----KNIVLNTPFLSSPMDTVTEDRMAIALALHGGLGIIHHNCSAEEQAA 132 (556)
T ss_dssp CSCCGGGEEECCCCCCSCG-GGCCCCEEEE----TTEEESSCEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHHHHHH
T ss_pred CCCChhhEEEccCCCCCCc-ccceeeeecc----CCcEeCCCEEecCcccccCHHHHHHHHHCCCeEEEcCCCCHHHHHH
Confidence 5899999999999999987 5999999999 7999999999999999999999999999999999999999999988
Q ss_pred hhhc----------Ccccccc------e-------EEe--------------cC-CChhhH------HHHHHHHHhCCC-
Q psy3862 97 FAVQ----------NPDVIKH------V-------AVS--------------SG-ISAKDL------AGLKEILAALPE- 131 (671)
Q Consensus 97 ~i~~----------~p~~~~~------~-------~v~--------------~G-~~~~d~------~rl~~l~~a~~~- 131 (671)
++++ +|.++.| + .++ .| ++.+|+ ..+.++|+....
T Consensus 133 ~V~~VKr~e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~d~~~~V~evMT~~lvt 212 (556)
T 4af0_A 133 MVRRVKKYENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMTTEVVT 212 (556)
T ss_dssp HHHHHHHCCC----------------------------------------------------------------------
T ss_pred HHHHHHhcccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccccccceEhhhhcccceEE
Confidence 8742 2222111 0 000 11 111121 123333332000
Q ss_pred -ceEEEeeccCCCC--------------hHHHH--HHHHHH--HhCCCce--------EEEEEec----cHHHHHHHHHC
Q psy3862 132 -IEYICLDVANGYT--------------QTFVD--FVRRIR--EMYPKHV--------IIAGNVV----TGEMVEELILS 180 (671)
Q Consensus 132 -~d~Ivld~a~G~~--------------~~~~~--~ik~lr--~~~P~~~--------li~g~v~----t~e~a~~Li~A 180 (671)
..-+.++.++... .+++- .++++. +.||++. .+++++. +.+++++|++|
T Consensus 213 ~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~VgAAVgv~~d~~eR~~aLv~A 292 (556)
T 4af0_A 213 GSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCGAAIGTRPGDKDRLKLLAEA 292 (556)
T ss_dssp ---------------------------------------------CTTCCBCTTTCCBCCEEEECSSHHHHHHHHHHHHT
T ss_pred ecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCCcchhcchhhceeeEEEeccCccHHHHHHHHHhc
Confidence 0001122221110 01111 124442 3588764 3566665 36899999999
Q ss_pred CCcEEEECcCCCce-----EEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEEEcccCCCccccceecc
Q psy3862 181 GADVIKVGIGPGSV-----CTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTG 255 (671)
Q Consensus 181 GaD~IvVdga~G~~-----~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~g 255 (671)
|+|+|++|++|||+ .++.+++.+|++++ +||||+|++++++|+++|||+|||||||||+||||+|+|
T Consensus 293 GvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~v--------iaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~G 364 (556)
T 4af0_A 293 GLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDV--------IAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMA 364 (556)
T ss_dssp TCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEE--------EEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCC
T ss_pred CCcEEEEeccccccHHHHHHHHHHHhhCCcceE--------EeccccCHHHHHHHHHcCCCEEeecCCCCcccccccccC
Confidence 99999999999996 23345555555433 699999999999999999999999999999999999999
Q ss_pred cCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcce
Q psy3862 256 VGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPI 335 (671)
Q Consensus 256 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPi 335 (671)
+|+||+|||+|||++|+++ ++||
T Consensus 365 vG~PQ~tAi~~~a~~a~~~---------------------------------------------------------~vpv 387 (556)
T 4af0_A 365 VGRPQGTAVYAVAEFASRF---------------------------------------------------------GIPC 387 (556)
T ss_dssp SCCCHHHHHHHHHHHHGGG---------------------------------------------------------TCCE
T ss_pred CCCcHHHHHHHHHHHHHHc---------------------------------------------------------CCCE
Confidence 9999999999999999875 4666
Q ss_pred EecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccccc
Q psy3862 336 IAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGH 415 (671)
Q Consensus 336 Iaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh 415 (671)
||
T Consensus 388 IA------------------------------------------------------------------------------ 389 (556)
T 4af0_A 388 IA------------------------------------------------------------------------------ 389 (556)
T ss_dssp EE------------------------------------------------------------------------------
T ss_pred Ee------------------------------------------------------------------------------
Confidence 66
Q ss_pred cccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEeeCc
Q psy3862 416 DQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGM 495 (671)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~G~ 495 (671)
+||+..+++++|++.+|||+||+|.+++|+.++|++.+..+|.++|.|+||
T Consensus 390 -----------------------------DGGI~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe~~~~~G~~~K~YrGM 440 (556)
T 4af0_A 390 -----------------------------DGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGM 440 (556)
T ss_dssp -----------------------------ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECT
T ss_pred -----------------------------cCCcCcchHHHHHhhcCCCEEEEchhhccccCCCCcEEEECCEEEEeeccc
Confidence 899999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEecccccccccchhh
Q psy3862 496 SSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQD 575 (671)
Q Consensus 496 ~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~~~ 575 (671)
+|+.||.+..... .+|..
T Consensus 441 gS~~Am~~~~~~~-----~~~~~--------------------------------------------------------- 458 (556)
T 4af0_A 441 GSIEAMEHTQRGS-----ASGKR--------------------------------------------------------- 458 (556)
T ss_dssp TSHHHHTTC-----------------------------------------------------------------------
T ss_pred ccHHHHHhcccCC-----ccccc---------------------------------------------------------
Confidence 9999997521100 00000
Q ss_pred hcccccccceeeccccccccccccccchhcccc-ccccCCCceEecccccCHHHHHHHHHHHHhhhccccCccccccccc
Q psy3862 576 ILGGLRSACTYVGASKLKELPRRATFIRCTAQL-NNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPR 654 (671)
Q Consensus 576 ~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~-~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~el~~ 654 (671)
.+.+. ...+.+|||.+. ++++|||++++|||||||+++|+||+|||||+|+|+|+++|+|||+
T Consensus 459 ---------~~~~~-------~~~s~dRyfq~~~~~~v~EGveg~VpykG~v~~~i~~l~gGlrs~m~y~Ga~~i~el~~ 522 (556)
T 4af0_A 459 ---------SILGL-------DNAATARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHS 522 (556)
T ss_dssp ------------CC-------SCSSEEECCCBSSSSCBCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHH
T ss_pred ---------ccccc-------cccchhhhcccccccccCCccEEeccCCCcHHHHHHHHHHHHHHhhhccCCCcHHHHHH
Confidence 00000 122356777654 5689999999999999999999999999999999999999999999
Q ss_pred cc-----EEEEeccc
Q psy3862 655 RA-----TFIRCTAQ 664 (671)
Q Consensus 655 ~a-----~Fvrvt~q 664 (671)
++ +|+|+|.+
T Consensus 523 ~a~~g~~rf~~iT~a 537 (556)
T 4af0_A 523 CARSGSLRFELRTAS 537 (556)
T ss_dssp HHHHTCSCEEECCCC
T ss_pred hhhccCceEEEEChh
Confidence 98 99999975
No 2
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=100.00 E-value=6.8e-60 Score=513.68 Aligned_cols=318 Identities=22% Similarity=0.311 Sum_probs=227.4
Q ss_pred ccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHH
Q psy3862 291 NDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEW 370 (671)
Q Consensus 291 ~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~ 370 (671)
...+||||||||+|+||++.| +||||+|+|+ +.+.+++|||+||||||++++||++|++.||||+||+|+|+|+|
T Consensus 6 ~~~~~t~ddvll~P~~~~~~~-~~v~l~t~lt----~~l~l~~PIi~a~M~~Vs~~~lA~Ava~aGGlGvi~~~~~~e~~ 80 (400)
T 3ffs_A 6 IGKGLTFEDILLVPNYSEVLP-REVSLETKLT----KNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQ 80 (400)
T ss_dssp EEEECCGGGEEECCCCBCSCG-GGCCCCEESS----SSCEESSSEEECSCTTTCSSHHHHHHHTTTCEEEECSSSCHHHH
T ss_pred cccCCCceeEEEecCCCccCH-HHccCccchh----cccCCCCCEEeCCCCCcCcHHHHHHHHHCCCEEEeCCCCCHHHH
Confidence 357899999999999999998 8999999997 67899999999999999999999999999999999999999999
Q ss_pred HHHHhcCccccc-------------------------------------------ceeeecccC-hhhHHHHHHcCCcEE
Q psy3862 371 KAFAVQNPDVIK-------------------------------------------HVADGGCTS-PGDVAKAMGAGADFV 406 (671)
Q Consensus 371 ~~~v~~~~~~~~-------------------------------------------~v~~~~~~~-~~~~~~l~~aG~d~i 406 (671)
.+++++++..-. .+.++.++. .++++.++++|+|+|
T Consensus 81 ~~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~~e~~~~lveaGvdvI 160 (400)
T 3ffs_A 81 VNEVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKSNNNIDAYSNENLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVI 160 (400)
T ss_dssp HHHHHHHHCCC-------------------------------CCTTCCBCTTSSBCCEEEECCC-CHHHHHHHHHTCSEE
T ss_pred HHHHHHHHhhccCcccCCCCccccccCCCCCHHHHHHHHHhhhCcchhhccccceeEEeecCCCHHHHHHHHHHcCCCEE
Confidence 999965422100 112222233 355677799999999
Q ss_pred EEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCcEEEeC
Q psy3862 407 MLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGELIEKD 485 (671)
Q Consensus 407 ~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~v~~~ 485 (671)
++| ++|||+....++++.++..| +..++.|++.+.+.++ ++++|||+|+||+ ++| +.|+||.+
T Consensus 161 vld-ta~G~~~~~~e~I~~ik~~~----------~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~-g~G-s~~~tr~~--- 224 (400)
T 3ffs_A 161 VLD-SAHGHSLNIIRTLKEIKSKM----------NIDVIVGNVVTEEATKELIENGADGIKVGI-GPG-SICTTRIV--- 224 (400)
T ss_dssp EEC-CSCCSBHHHHHHHHHHHTTC----------CCEEEEEEECSHHHHHHHHHTTCSEEEECC-----------CC---
T ss_pred EEe-CCCCCcccHHHHHHHHHhcC----------CCeEEEeecCCHHHHHHHHHcCCCEEEEeC-CCC-cCcccccc---
Confidence 999 89999877777655444433 2234556788999888 5799999999996 999 89999853
Q ss_pred CeEEEEeeCcccHHHHHhhccccccc---cccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCcccccccCCcc
Q psy3862 486 GKKVKLFYGMSSTTAMDKHAGGVAEY---RAAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGASKLKELPRRA 557 (671)
Q Consensus 486 g~~~k~g~G~~q~tAi~~~a~~~~~y---~~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~~i~e~~~~a 557 (671)
.++|.|+++++.+++..+.++ ..++|+ |.+++|++||++ ||+|+.|++++|||++.
T Consensus 225 -----~g~g~p~~~al~~v~~~~~~~~IPVIA~GG---I~~~~di~kalalGAd~V~vGt~f~~t~Es~~~~-------- 288 (400)
T 3ffs_A 225 -----AGVGVPQITAIEKCSSVASKFGIPIIADGG---IRYSGDIGKALAVGASSVMIGSILAGTEESPGEK-------- 288 (400)
T ss_dssp -----SCBCCCHHHHHHHHHHHHTTTTCCEEEESC---CCSHHHHHHHHTTTCSEEEECGGGTTBTTSSCCE--------
T ss_pred -----cccchhHHHHHHHHHHHHHhcCCCEEecCC---CCCHHHHHHHHHcCCCEEEEChHHhcCCCCCchh--------
Confidence 467899999999887554322 134443 789999999999 99999999999999884
Q ss_pred eEEEecccccccccchhhhcccccccceeeccccccccccccccchhccc---cccccCCCceEecccccCHHHHHHHHH
Q psy3862 558 TFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ---LNNVAAEGKTVQVPYRGDVNDTVQDIL 634 (671)
Q Consensus 558 ~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~---~~~~~~eG~~~~v~~kG~v~~~l~~l~ 634 (671)
+ +.+| +++|.||||+|+.||+ .++++||+.. .++.+|||++++|||||||+++|+||+
T Consensus 289 -~----------------~~~g-~~~k~y~Gm~s~~am~-~~~~~ry~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~ 349 (400)
T 3ffs_A 289 -E----------------LIGD-TVYKYYRGMGSVGAMK-SGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLV 349 (400)
T ss_dssp -E----------------ESSS-SEEEC------------------------------------CEECCBCHHHHHHHHH
T ss_pred -h----------------hcCC-eeeeeecCcchHHHHh-ccccchhhcccccccccCCCCcEEecCCCCCHHHHHHHHH
Confidence 1 2346 6789999999999996 5788999863 367899999999999999999999999
Q ss_pred HHHhhhccccCcccccccccccEEEEeccc
Q psy3862 635 GGLRSACTYVGASKLKELPRRATFIRCTAQ 664 (671)
Q Consensus 635 gGLrs~m~y~Ga~~l~el~~~a~Fvrvt~q 664 (671)
|||||+|+|+|+++|+|||+|++|+|+|++
T Consensus 350 ~glr~~~~y~G~~~i~el~~~~~f~~~t~~ 379 (400)
T 3ffs_A 350 GGLRSCMGYLGSASIEELWKKSSYVEITTS 379 (400)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHCCEEECCC-
T ss_pred HHHHHhhhhcCcccHHHHHhCCeEEEEccc
Confidence 999999999999999999999999999975
No 3
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=100.00 E-value=5.8e-57 Score=486.44 Aligned_cols=332 Identities=34% Similarity=0.569 Sum_probs=271.9
Q ss_pred ccccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHH
Q psy3862 14 INDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEE 93 (671)
Q Consensus 14 ~~~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Ee 93 (671)
+.+.+||||||+|+|+++++.| ++|||+|+|+ +.+++++||++++|+++++.+||.+++++||+|+||+++++|+
T Consensus 9 ~~~~~~~fddv~lvp~~~~~~~-~~vdl~t~lt----~~~~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~~s~e~ 83 (366)
T 4fo4_A 9 IAKEALTFDDVLLVPAHSTVLP-NTADLRTRLT----KNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQ 83 (366)
T ss_dssp CCCCCCCGGGEEECCCCCCCCG-GGCBCCEEEE----TTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSCHHH
T ss_pred hhcccCCcceEEEECCCCCCCh-hhcccceecc----cccccCCCEEeCCCCCCChHHHHHHHHHcCCceEeecCCCHHH
Confidence 3467999999999999999887 5999999998 7899999999999999999999999999999999999999999
Q ss_pred HHHhhhcCccc-ccceEEecCCChhhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHH
Q psy3862 94 WKAFAVQNPDV-IKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGE 172 (671)
Q Consensus 94 q~~~i~~~p~~-~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e 172 (671)
|.+++++.... ...+.++.+.+++..++++.++++ +++++++|.++|++..+.+.++++++.+|...+++|++.|.+
T Consensus 84 ~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~liea--Gvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e 161 (366)
T 4fo4_A 84 QAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEA--GVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAE 161 (366)
T ss_dssp HHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHT--TCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECSHH
T ss_pred HHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhC--CCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCCHH
Confidence 98887543211 113444455555667899999998 789999999999999999999999988988777888888888
Q ss_pred HHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEEEcccCCCccccce
Q psy3862 173 MVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRL 252 (671)
Q Consensus 173 ~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~ 252 (671)
.++.|+++|||+| +||+|||++||||.
T Consensus 162 ~A~~a~~aGAD~I-----------------------------------------------------~vG~gpGs~~~tr~ 188 (366)
T 4fo4_A 162 GARALIEAGVSAV-----------------------------------------------------KVGIGPGSICTTRI 188 (366)
T ss_dssp HHHHHHHHTCSEE-----------------------------------------------------EECSSCSTTBCHHH
T ss_pred HHHHHHHcCCCEE-----------------------------------------------------EEecCCCCCCCccc
Confidence 8887777777777 88999999999999
Q ss_pred ecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeC
Q psy3862 253 KTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQG 332 (671)
Q Consensus 253 V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~ 332 (671)
+.++|.||++++.+|+++++. .+
T Consensus 189 ~~g~g~p~~~~l~~v~~~~~~---------------------------------------------------------~~ 211 (366)
T 4fo4_A 189 VTGVGVPQITAIADAAGVANE---------------------------------------------------------YG 211 (366)
T ss_dssp HHCCCCCHHHHHHHHHHHHGG---------------------------------------------------------GT
T ss_pred ccCcccchHHHHHHHHHHHhh---------------------------------------------------------cC
Confidence 999999999999999998864 25
Q ss_pred cceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEcccc
Q psy3862 333 VPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMF 412 (671)
Q Consensus 333 iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a 412 (671)
+|||+
T Consensus 212 iPVIA--------------------------------------------------------------------------- 216 (366)
T 4fo4_A 212 IPVIA--------------------------------------------------------------------------- 216 (366)
T ss_dssp CCEEE---------------------------------------------------------------------------
T ss_pred CeEEE---------------------------------------------------------------------------
Confidence 88888
Q ss_pred ccccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEe
Q psy3862 413 AGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLF 492 (671)
Q Consensus 413 ~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g 492 (671)
+||+....++++++.+|||+|++|....++.+|+++.+..
T Consensus 217 --------------------------------~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp~~~~~~-------- 256 (366)
T 4fo4_A 217 --------------------------------DGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILY-------- 256 (366)
T ss_dssp --------------------------------ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEE--------
T ss_pred --------------------------------eCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCCchhhhh--------
Confidence 7998788999999999999999996444444444433222
Q ss_pred eCcccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEecccccccccc
Q psy3862 493 YGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDT 572 (671)
Q Consensus 493 ~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~ 572 (671)
T Consensus 257 -------------------------------------------------------------------------------- 256 (366)
T 4fo4_A 257 -------------------------------------------------------------------------------- 256 (366)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhcccccccceeeccccccccccccccchhccc---cccccCCCceEecccccCHHHHHHHHHHHHhhhccccCcccc
Q psy3862 573 VQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ---LNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKL 649 (671)
Q Consensus 573 ~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~---~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l 649 (671)
+| +++|.||||+|..||++ ++++||+.. .++.+|||++++|||||||+++|+||+|||||+|+|+|+++|
T Consensus 257 -----~g-~~~k~y~gm~s~~am~~-~~~~ry~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~glr~~~~y~g~~~~ 329 (366)
T 4fo4_A 257 -----QG-RSYKAYRGMGSLGAMSK-GSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATV 329 (366)
T ss_dssp -----TT-EEEEEEECTTSHHHHCC----------------CCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBH
T ss_pred -----CC-ceeEEeeccccHHHHhc-ccccchhccccccccccCCCcEEecCCCCCHHHHHHHHHHHHHHhhhccCcccH
Confidence 23 35677777777777753 566777753 257899999999999999999999999999999999999999
Q ss_pred cccccccEEEEeccc
Q psy3862 650 KELPRRATFIRCTAQ 664 (671)
Q Consensus 650 ~el~~~a~Fvrvt~q 664 (671)
+|||+|++|+|+|++
T Consensus 330 ~~~~~~~~f~~~t~~ 344 (366)
T 4fo4_A 330 EDLRTKAQFVRISGA 344 (366)
T ss_dssp HHHHHHCCEEECCHH
T ss_pred HHHHhCCeEEEEccc
Confidence 999999999999975
No 4
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=100.00 E-value=1e-58 Score=511.89 Aligned_cols=252 Identities=22% Similarity=0.261 Sum_probs=219.9
Q ss_pred cccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHH
Q psy3862 292 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 371 (671)
Q Consensus 292 ~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~ 371 (671)
..+||||||||+|+||++.| +||||+|+|+ ++++|+||||||||||||+.+||++||++||||+||||+|+|+|+
T Consensus 57 ~~GLTfDDVlLvP~~s~v~p-~~Vdl~t~lt----~~i~L~iPlvSA~MDTVTe~~MAIamAr~GGiGvIH~n~sie~Qa 131 (556)
T 4af0_A 57 NGGLTYNDFLVLPGHINFPA-SDVSLQSKAT----KNIVLNTPFLSSPMDTVTEDRMAIALALHGGLGIIHHNCSAEEQA 131 (556)
T ss_dssp HCSCCGGGEEECCCCCCSCG-GGCCCCEEEE----TTEEESSCEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHHHHH
T ss_pred CCCCChhhEEEccCCCCCCc-ccceeeeecc----CCcEeCCCEEecCcccccCHHHHHHHHHCCCeEEEcCCCCHHHHH
Confidence 35899999999999999999 5999999998 689999999999999999999999999999999999999999999
Q ss_pred HHHhcCccc-----------------------------------------------------------------------
Q psy3862 372 AFAVQNPDV----------------------------------------------------------------------- 380 (671)
Q Consensus 372 ~~v~~~~~~----------------------------------------------------------------------- 380 (671)
++|++++..
T Consensus 132 ~~V~~VKr~e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~d~~~~V~evMT~~lv 211 (556)
T 4af0_A 132 AMVRRVKKYENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMTTEVV 211 (556)
T ss_dssp HHHHHHHHCCC---------------------------------------------------------------------
T ss_pred HHHHHHHhcccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccccccceEhhhhcccceE
Confidence 998653110
Q ss_pred ----------------------cc-----------------------------------ceeeecccCh---hhHHHHHH
Q psy3862 381 ----------------------IK-----------------------------------HVADGGCTSP---GDVAKAMG 400 (671)
Q Consensus 381 ----------------------~~-----------------------------------~v~~~~~~~~---~~~~~l~~ 400 (671)
++ .++++.++++ ++.+.|++
T Consensus 212 t~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~VgAAVgv~~d~~eR~~aLv~ 291 (556)
T 4af0_A 212 TGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCGAAIGTRPGDKDRLKLLAE 291 (556)
T ss_dssp ----------------------------------------------CTTCCBCTTTCCBCCEEEECSSHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCCcchhcchhhceeeEEEeccCccHHHHHHHHHh
Confidence 00 1344455554 45566799
Q ss_pred cCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEECccccCCccCCC
Q psy3862 401 AGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGG 479 (671)
Q Consensus 401 aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt 479 (671)
||+|+|||| ++|||+++++++++.++..||.++ |++|||+|++.++ ++++|||+||||+ ||| |+|||
T Consensus 292 AGvD~iviD-~ahGhs~~v~~~i~~ik~~~p~~~---------viaGNVaT~e~a~~Li~aGAD~vkVGi-GpG-SiCtT 359 (556)
T 4af0_A 292 AGLDVVVLD-SSQGNSVYQIEFIKWIKQTYPKID---------VIAGNVVTREQAAQLIAAGADGLRIGM-GSG-SICIT 359 (556)
T ss_dssp TTCCEEEEC-CSCCCSHHHHHHHHHHHHHCTTSE---------EEEEEECSHHHHHHHHHHTCSEEEECS-SCS-TTBCC
T ss_pred cCCcEEEEe-ccccccHHHHHHHHHHHhhCCcce---------EEeccccCHHHHHHHHHcCCCEEeecC-CCC-ccccc
Confidence 999999999 999999999999999999999884 7899999999999 5699999999996 999 99999
Q ss_pred cEEEeCCeEEEEeeCcccHHHHHhhcccccccc---ccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCccccc
Q psy3862 480 ELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYR---AAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGASKLK 551 (671)
Q Consensus 480 ~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~---~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~~i~ 551 (671)
|++ +|+|+||+||+.+|+.++++|. ++||+ |+|+|||+|||| ||||++|||++|+||+.+.
T Consensus 360 r~v--------~GvG~PQ~tAi~~~a~~a~~~~vpvIADGG---I~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe~~~ 428 (556)
T 4af0_A 360 QEV--------MAVGRPQGTAVYAVAEFASRFGIPCIADGG---IGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFY 428 (556)
T ss_dssp TTT--------CCSCCCHHHHHHHHHHHHGGGTCCEEEESC---CCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEE
T ss_pred ccc--------cCCCCcHHHHHHHHHHHHHHcCCCEEecCC---cCcchHHHHHhhcCCCEEEEchhhccccCCCCcEEE
Confidence 985 6899999999999999888873 56664 799999999999 9999999999999999521
Q ss_pred ccCCcceEEEecccccccccchhhhcccccccceeecccccccccc
Q psy3862 552 ELPRRATFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPR 597 (671)
Q Consensus 552 e~~~~a~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~ 597 (671)
.+| +++|.||||+|..||++
T Consensus 429 -------------------------~~G-~~~K~YrGMgS~~Am~~ 448 (556)
T 4af0_A 429 -------------------------HEG-KRVKVYRGMGSIEAMEH 448 (556)
T ss_dssp -------------------------ETT-EEEEEEECTTSHHHHTT
T ss_pred -------------------------ECC-EEEEeecccccHHHHHh
Confidence 235 57899999999999974
No 5
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=100.00 E-value=1.1e-54 Score=468.68 Aligned_cols=330 Identities=33% Similarity=0.532 Sum_probs=251.2
Q ss_pred cccccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHH
Q psy3862 13 IINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLE 92 (671)
Q Consensus 13 ~~~~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~E 92 (671)
.+...+||||||+|+|+++++.| ++|||+|+|+ +.++|++||+++||+++++.+||.+++++||+|+||+++++|
T Consensus 7 ~~~~~~~~fddv~l~p~~~~~~~-~~vdl~t~l~----~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~~~~s~e 81 (361)
T 3khj_A 7 KNIGKGLTFEDILLVPNYSEVLP-REVSLETKLT----KNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDME 81 (361)
T ss_dssp CEEEECCCGGGEEECCCCBCCCG-GGCCCCEESS----SSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEECSSSCHH
T ss_pred cccccCCCcceEEEECCCCCCCH-HHccCceecc----cccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEecCCCHH
Confidence 34467999999999999888775 8999999997 789999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCc-ccccceEEecCCChhhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccH
Q psy3862 93 EWKAFAVQNP-DVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTG 171 (671)
Q Consensus 93 eq~~~i~~~p-~~~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~ 171 (671)
++.+++++.. ....++.++.+... .++++.++++ +++++++|.++|++..+.+.++++++.+ ...++++++.|.
T Consensus 82 ~~~~~I~~vk~~~~~pvga~ig~~~--~e~a~~l~ea--Gad~I~ld~a~G~~~~~~~~i~~i~~~~-~~~Vivg~v~t~ 156 (361)
T 3khj_A 82 SQVNEVLKVKNSGGLRVGAAIGVNE--IERAKLLVEA--GVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNVVTE 156 (361)
T ss_dssp HHHHHHHHHHHTTCCCCEEEECTTC--HHHHHHHHHT--TCSEEEECCSCCSBHHHHHHHHHHHHHC-CCEEEEEEECSH
T ss_pred HHHHHHHHHHhccCceEEEEeCCCH--HHHHHHHHHc--CcCeEEEeCCCCCcHHHHHHHHHHHHhc-CCcEEEccCCCH
Confidence 9988776432 22346676666543 7788889998 8899999999999998999999988776 345666677777
Q ss_pred HHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEEEcccCCCccccc
Q psy3862 172 EMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTR 251 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr 251 (671)
+.++.|+++|||+| +||++||++||||
T Consensus 157 e~A~~l~~aGaD~I-----------------------------------------------------~VG~~~Gs~~~tr 183 (361)
T 3khj_A 157 EATKELIENGADGI-----------------------------------------------------KVGIGPGSICTTR 183 (361)
T ss_dssp HHHHHHHHTTCSEE-----------------------------------------------------EECSSCCTTCCHH
T ss_pred HHHHHHHHcCcCEE-----------------------------------------------------EEecCCCcCCCcc
Confidence 77777766666666 8899999999999
Q ss_pred eecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceee
Q psy3862 252 LKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQ 331 (671)
Q Consensus 252 ~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~ 331 (671)
.++|+|.||++++.+|+++++. .
T Consensus 184 ~~~g~g~p~~~~i~~v~~~~~~---------------------------------------------------------~ 206 (361)
T 3khj_A 184 IVAGVGVPQITAIEKCSSVASK---------------------------------------------------------F 206 (361)
T ss_dssp HHTCBCCCHHHHHHHHHHHHHH---------------------------------------------------------H
T ss_pred cccCCCCCcHHHHHHHHHHHhh---------------------------------------------------------c
Confidence 9999999999999999998864 2
Q ss_pred CcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccc
Q psy3862 332 GVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGM 411 (671)
Q Consensus 332 ~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~ 411 (671)
++|||+
T Consensus 207 ~iPVIA-------------------------------------------------------------------------- 212 (361)
T 3khj_A 207 GIPIIA-------------------------------------------------------------------------- 212 (361)
T ss_dssp TCCEEE--------------------------------------------------------------------------
T ss_pred CCeEEE--------------------------------------------------------------------------
Confidence 578887
Q ss_pred cccccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEE
Q psy3862 412 FAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKL 491 (671)
Q Consensus 412 a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~ 491 (671)
+||+....++++++.+|||+|++|....++.+|+++.+.
T Consensus 213 ---------------------------------~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~~~~~-------- 251 (361)
T 3khj_A 213 ---------------------------------DGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKEL-------- 251 (361)
T ss_dssp ---------------------------------ESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSCEEEE--------
T ss_pred ---------------------------------ECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCcchhh--------
Confidence 799878899999999999999999644443333333322
Q ss_pred eeCcccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEeccccccccc
Q psy3862 492 FYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVND 571 (671)
Q Consensus 492 g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~ 571 (671)
T Consensus 252 -------------------------------------------------------------------------------- 251 (361)
T 3khj_A 252 -------------------------------------------------------------------------------- 251 (361)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhcccccccceeeccccccccccccccchhccc---cccccCCCceEecccccCHHHHHHHHHHHHhhhccccCccc
Q psy3862 572 TVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ---LNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASK 648 (671)
Q Consensus 572 ~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~---~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~ 648 (671)
.+| +++|.||||+|..||+ .++++||+.. .++.+|||++++|||||||+++|+||+|||||+|+|+|+++
T Consensus 252 -----~~g-~~~k~y~gm~s~~a~~-~~~~~~y~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~gl~~~~~~~g~~~ 324 (361)
T 3khj_A 252 -----IGD-TVYKYYRGMGSVGAMK-SGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSAS 324 (361)
T ss_dssp -----ETT-EEEEEC----------------------------------CEEECCBCHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred -----cCC-eEEEEeeccchHHHHh-ccchhhhhcccccccccCCCccEEeCCCCCCHHHHHHHHHHHHHHhhhhcCCcc
Confidence 124 4567788888888885 4567787753 36789999999999999999999999999999999999999
Q ss_pred ccccccccEEEEeccc
Q psy3862 649 LKELPRRATFIRCTAQ 664 (671)
Q Consensus 649 l~el~~~a~Fvrvt~q 664 (671)
|+|||+|++|+|+|++
T Consensus 325 ~~~~~~~~~~~~~~~~ 340 (361)
T 3khj_A 325 IEELWKKSSYVEITTS 340 (361)
T ss_dssp HHHHHHHCCEEECCC-
T ss_pred HHHHHhCCeEEEEccc
Confidence 9999999999999975
No 6
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=100.00 E-value=1.5e-53 Score=477.56 Aligned_cols=331 Identities=35% Similarity=0.594 Sum_probs=269.0
Q ss_pred cccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHHH
Q psy3862 15 NDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEW 94 (671)
Q Consensus 15 ~~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Eeq 94 (671)
...+||||||+|+|+++++.| ++|||+|+|| +++.+++||++++|+++|+.+||+++|+.||+|+||+|+++|+|
T Consensus 7 ~~~~~t~~d~~~~p~~~~~~~-~~~~~~t~lt----~~i~l~iPivsa~MdtVTe~~ma~a~a~~GGiGvI~~n~s~e~q 81 (496)
T 4fxs_A 7 AKEALTFDDVLLVPAHSTVLP-NTADLRTRLT----KNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQ 81 (496)
T ss_dssp CSCCCCGGGEEECCCCCCCCG-GGCBCCEEEE----TTEEESSSEEECCCTTTCSHHHHHHHHHHTCEEEECSSSCHHHH
T ss_pred cccCcCcccEEEecCcccccc-ccccccceec----cccccCCCceecCcchhhHHHHHHHHHHcCCcceecCCCCHHHH
Confidence 467999999999999999987 6999999999 89999999999999999999999999999999999999999987
Q ss_pred HHhhhc----------Ccc-------------------------cc------------------------------c--c
Q psy3862 95 KAFAVQ----------NPD-------------------------VI------------------------------K--H 107 (671)
Q Consensus 95 ~~~i~~----------~p~-------------------------~~------------------------------~--~ 107 (671)
.+++.+ +|. .. . +
T Consensus 82 a~~V~~Vk~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~~~~~~v~diM~p~~~~ 161 (496)
T 4fxs_A 82 AAQVHQVKIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFVTDLTKSVAAVMTPKERL 161 (496)
T ss_dssp HHHHHHHHHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCCCTTSBGGGTSEEGGGC
T ss_pred HHHHHhccccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcccCCCcHHHHhcCCCCC
Confidence 655420 000 00 0 0
Q ss_pred ------------------------------------------------------------eEEecCCChhhHHHHHHHHH
Q psy3862 108 ------------------------------------------------------------VAVSSGISAKDLAGLKEILA 127 (671)
Q Consensus 108 ------------------------------------------------------------~~v~~G~~~~d~~rl~~l~~ 127 (671)
+.+++|...++.++++.+++
T Consensus 162 vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~p~a~~d~~grL~v~aavG~~~d~~~~a~~l~~ 241 (496)
T 4fxs_A 162 ATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERVKALVE 241 (496)
T ss_dssp CEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCCTTCCBCTTSCBCCEEECCSSSCCHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhcccchhhhcccceeeeeeeccccchHHHHHHHHh
Confidence 00112223344678888888
Q ss_pred hCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcch
Q psy3862 128 ALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFF 207 (671)
Q Consensus 128 a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~ 207 (671)
+ +++++.+|.+++++..+.+.++++++.+|...+++|++.+.+.+++|+++|||+|
T Consensus 242 a--G~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I---------------------- 297 (496)
T 4fxs_A 242 A--GVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAV---------------------- 297 (496)
T ss_dssp T--TCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEE----------------------
T ss_pred c--cCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEE----------------------
Confidence 7 7889999999998888889999988888876677777766666666666665555
Q ss_pred hhhhccccCCccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchhhhhhccc
Q psy3862 208 LIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQ 287 (671)
Q Consensus 208 ~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (671)
+||+||||.|+||.++|+|.||++++.+|++++++.
T Consensus 298 -------------------------------~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~------------- 333 (496)
T 4fxs_A 298 -------------------------------KVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY------------- 333 (496)
T ss_dssp -------------------------------EECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG-------------
T ss_pred -------------------------------EECCCCCcCcccccccCCCccHHHHHHHHHHHhccC-------------
Confidence 899999999999999999999999999999998742
Q ss_pred eeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCH
Q psy3862 288 KIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTL 367 (671)
Q Consensus 288 ~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~ 367 (671)
++|||+
T Consensus 334 --------------------------------------------~iPVIa------------------------------ 339 (496)
T 4fxs_A 334 --------------------------------------------GIPVIA------------------------------ 339 (496)
T ss_dssp --------------------------------------------TCCEEE------------------------------
T ss_pred --------------------------------------------CCeEEE------------------------------
Confidence 478887
Q ss_pred HHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCceeecc
Q psy3862 368 EEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGG 447 (671)
Q Consensus 368 e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG 447 (671)
+||
T Consensus 340 -----------------------------------------------------------------------------~GG 342 (496)
T 4fxs_A 340 -----------------------------------------------------------------------------DGG 342 (496)
T ss_dssp -----------------------------------------------------------------------------ESC
T ss_pred -----------------------------------------------------------------------------eCC
Confidence 799
Q ss_pred ccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEeeCcccHHHHHhhccccccccccCCceEeeecCCCH
Q psy3862 448 CTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDV 527 (671)
Q Consensus 448 ~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi 527 (671)
+....++++++.+|||+|++|....|+.+|+++.+.
T Consensus 343 I~~~~di~kala~GAd~V~iGs~f~~t~Espg~~~~-------------------------------------------- 378 (496)
T 4fxs_A 343 IRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVIL-------------------------------------------- 378 (496)
T ss_dssp CCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEE--------------------------------------------
T ss_pred CCCHHHHHHHHHcCCCeEEecHHHhcCCCCCcceee--------------------------------------------
Confidence 888999999999999999999755554444443322
Q ss_pred HHHHHHHHhhHhHhccccCcccccccCCcceEEEecccccccccchhhhcccccccceeeccccccccccccccchhccc
Q psy3862 528 NDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ 607 (671)
Q Consensus 528 ~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~ 607 (671)
.+| +++|.||||+|+.||+ .++++||+..
T Consensus 379 -------------------------------------------------~~g-~~~k~~~gm~s~~a~~-~~~~~r~~~~ 407 (496)
T 4fxs_A 379 -------------------------------------------------YQG-RSYKAYRGMGSLGAMS-KGSSDRYFQT 407 (496)
T ss_dssp -------------------------------------------------SSS-CEEEEEECTTSHHHHH-SSSCCSTTTC
T ss_pred -------------------------------------------------eCC-eEeeeecccchHHHHh-cccccccccc
Confidence 224 3567777777777775 4567777753
Q ss_pred ---cccccCCCceEecccccCHHHHHHHHHHHHhhhccccCcccccccccccEEEEeccc
Q psy3862 608 ---LNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ 664 (671)
Q Consensus 608 ---~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~el~~~a~Fvrvt~q 664 (671)
.++.+|||++++|||||+++++|++|++||||+|+|+|+++|+|||++++|+|+|.+
T Consensus 408 ~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~~~~~~~~~~~ 467 (496)
T 4fxs_A 408 DNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTKAQFVRISGA 467 (496)
T ss_dssp ---CCCCCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHHCCEEECCHH
T ss_pred ccccccccCCccEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhCCeEEEEccc
Confidence 257899999999999999999999999999999999999999999999999999964
No 7
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.2e-54 Score=482.51 Aligned_cols=375 Identities=35% Similarity=0.567 Sum_probs=244.3
Q ss_pred ccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHHHH
Q psy3862 16 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 95 (671)
Q Consensus 16 ~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Eeq~ 95 (671)
+.+||||||+|+|+++++.| ++||++|+|| +++.+++|+++++|+++++.+||+++++.||+|+||+|+++|+|.
T Consensus 7 ~~~~t~~d~~~~p~~~~~~~-~~~~~~t~lt----~~i~l~iPivsa~M~tVTe~~lA~ala~~GGiGvI~~~~~~e~~a 81 (490)
T 4avf_A 7 QEALTFDDVLLIPGYSEVLP-KDVSLKTRLT----RGIELNIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQA 81 (490)
T ss_dssp EEECCGGGEEECCCCBCSCG-GGSCCCEEEE----TTEEESSSEEECSCTTTCSHHHHHHHHHHTSEEEECCSSCHHHHH
T ss_pred CCCCCcceEEEeCCCCcccc-cceeeecccc----cCcccCCCccccchhhhCHHHHHHHHHHcCCCccccCCCCHHHHH
Confidence 57999999999999999987 6999999999 899999999999999999999999999999999999999999987
Q ss_pred Hhhhc---Ccc--cccceEEe----------------------------cC-CChhhHH-------HHHHHHH-h-----
Q psy3862 96 AFAVQ---NPD--VIKHVAVS----------------------------SG-ISAKDLA-------GLKEILA-A----- 128 (671)
Q Consensus 96 ~~i~~---~p~--~~~~~~v~----------------------------~G-~~~~d~~-------rl~~l~~-a----- 128 (671)
+++.+ ..+ ...++.+. .| ++.+|+. .+.++|. .
T Consensus 82 ~~v~~vk~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~~~~~~~V~~vMtp~~~~vt 161 (490)
T 4avf_A 82 AEVRKVKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVKPNAGDTVAAIMTPKDKLVT 161 (490)
T ss_dssp HHHHHHHHCCC---------------------------------------------------------------------
T ss_pred HHhhhhcccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhccccCCcHHHHhccCCCCEE
Confidence 77642 110 00011000 01 1111211 1222222 0
Q ss_pred -CCCc---------------eEEEeeccCCCChHHHHHHHHHH--HhCCCce------E-EEEEe----ccHHHHHHHHH
Q psy3862 129 -LPEI---------------EYICLDVANGYTQTFVDFVRRIR--EMYPKHV------I-IAGNV----VTGEMVEELIL 179 (671)
Q Consensus 129 -~~~~---------------d~Ivld~a~G~~~~~~~~ik~lr--~~~P~~~------l-i~g~v----~t~e~a~~Li~ 179 (671)
.++. ...++|. +|....++. .+++. ..||+.. + +...+ .+.+++++|++
T Consensus 162 v~~~~~l~ea~~~m~~~~i~~lpVVDe-~g~lvGiIT-~~Dil~~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~ 239 (490)
T 4avf_A 162 AREGTPLEEMKAKLYENRIEKMLVVDE-NFYLRGLVT-FRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALVA 239 (490)
T ss_dssp -----------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEe-hHHhhhhccCcchhhhccCcceeeeeeccccchHHHHHHHhh
Confidence 0000 0011111 011111111 12221 2355432 2 22233 24689999999
Q ss_pred CCCcEEEECcCCCce-----EEEEecccCCcchhhhhccccC-CccccccHHHHHHHHHcCCCEEEEcccCCCcccccee
Q psy3862 180 SGADVIKVGIGPGSV-----CTTRLKNKTSDFFLIQFYSCIP-QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLK 253 (671)
Q Consensus 180 AGaD~IvVdga~G~~-----~~t~v~~~~~~~~~i~~i~~~p-~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V 253 (671)
+|+|+|++|.++||. .++++++.+|+ +| ++||+.|.+.+++|+++|||+|+||+||||+|+||.+
T Consensus 240 aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~---------~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~ 310 (490)
T 4avf_A 240 AGVDVVVVDTAHGHSKGVIERVRWVKQTFPD---------VQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIV 310 (490)
T ss_dssp TTCSEEEEECSCCSBHHHHHHHHHHHHHCTT---------SEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHH
T ss_pred cccceEEecccCCcchhHHHHHHHHHHHCCC---------ceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCcccc
Confidence 999999999999985 12223333332 23 6899999999999999999999999999999999999
Q ss_pred cccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCc
Q psy3862 254 TGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGV 333 (671)
Q Consensus 254 ~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~i 333 (671)
.|+|.||++++.+|++++++ .++
T Consensus 311 ~g~g~p~~~~l~~v~~~~~~---------------------------------------------------------~~i 333 (490)
T 4avf_A 311 AGVGVPQISAIANVAAALEG---------------------------------------------------------TGV 333 (490)
T ss_dssp TCBCCCHHHHHHHHHHHHTT---------------------------------------------------------TTC
T ss_pred CCCCccHHHHHHHHHHHhcc---------------------------------------------------------CCC
Confidence 99999999999999998864 258
Q ss_pred ceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccc
Q psy3862 334 PIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFA 413 (671)
Q Consensus 334 PiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~ 413 (671)
|||+
T Consensus 334 PVIa---------------------------------------------------------------------------- 337 (490)
T 4avf_A 334 PLIA---------------------------------------------------------------------------- 337 (490)
T ss_dssp CEEE----------------------------------------------------------------------------
T ss_pred cEEE----------------------------------------------------------------------------
Confidence 8888
Q ss_pred cccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEee
Q psy3862 414 GHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFY 493 (671)
Q Consensus 414 gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~ 493 (671)
+||+....++++++.+|||+|++|....|+.+|+++.+..+
T Consensus 338 -------------------------------~GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~-------- 378 (490)
T 4avf_A 338 -------------------------------DGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQ-------- 378 (490)
T ss_dssp -------------------------------ESCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEET--------
T ss_pred -------------------------------eCCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeEC--------
Confidence 79988999999999999999999975555444444443222
Q ss_pred CcccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEecccccccccch
Q psy3862 494 GMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTV 573 (671)
Q Consensus 494 G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~ 573 (671)
T Consensus 379 -------------------------------------------------------------------------------- 378 (490)
T 4avf_A 379 -------------------------------------------------------------------------------- 378 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccccccceeeccccccccc-cccccchhcccc----ccccCCCceEecccccCHHHHHHHHHHHHhhhccccCccc
Q psy3862 574 QDILGGLRSACTYVGASKLKELP-RRATFIRCTAQL----NNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASK 648 (671)
Q Consensus 574 ~~~~~G~~~~k~y~Gm~s~~a~~-~~~~~~r~~~~~----~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~ 648 (671)
| +++|.||||+|+.||. +.++++||+... ++.+|||++++|||||+++++|++|++||||+|+|+|+++
T Consensus 379 -----g-~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~ 452 (490)
T 4avf_A 379 -----G-RSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEKLVPEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSAD 452 (490)
T ss_dssp -----T-EEEEC---------------------------------------CBCCBCHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred -----C-eEeeeecCcccHHHHhhcccccchhhcccccccccccCCCcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCc
Confidence 3 3556777777777773 345667776532 4689999999999999999999999999999999999999
Q ss_pred ccccccccEEEEeccc
Q psy3862 649 LKELPRRATFIRCTAQ 664 (671)
Q Consensus 649 l~el~~~a~Fvrvt~q 664 (671)
|+|||++++|+|+|.+
T Consensus 453 i~~l~~~~~~~~~~~~ 468 (490)
T 4avf_A 453 IQQMRTQPQFVRITGA 468 (490)
T ss_dssp HHHHHHSCCEEEECCC
T ss_pred HHHHHhCCEEEEEccc
Confidence 9999999999999975
No 8
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.6e-54 Score=465.46 Aligned_cols=311 Identities=23% Similarity=0.324 Sum_probs=257.2
Q ss_pred cccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHH
Q psy3862 292 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 371 (671)
Q Consensus 292 ~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~ 371 (671)
..+|+||||+|+|++++..||++||++++-++ ..+++++||++||||++++.+||+++++.||+++||+++++|+|.
T Consensus 5 ~~~~~fddv~l~P~~~~~~~r~~vd~~~~t~l---~g~~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~ 81 (361)
T 3r2g_A 5 DQAITFDDVLLVPSYNHHESRRVVETTSTDRL---GKLTLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEENI 81 (361)
T ss_dssp -CCCCGGGEEECCCCCCSCTTCCCCCCEECTT---SSCEESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCHHHHH
T ss_pred ccccccceEEEECCCCCCCccccccceeeEEE---CCEEcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCHHHHH
Confidence 57899999999999999999999776663222 367899999999999999999999999999999999999999999
Q ss_pred HHHhcCcccccceeeecccCh---hhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCceeeccc
Q psy3862 372 AFAVQNPDVIKHVADGGCTSP---GDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGC 448 (671)
Q Consensus 372 ~~v~~~~~~~~~v~~~~~~~~---~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~ 448 (671)
+++++.+. .+....++.+ +.++.++++|+|+|+|| ++|||+..+.+.++.++..+|.+ .|+.|+
T Consensus 82 ~~i~~~~~---~~~~~~g~~~~~~e~~~~a~~aGvdvI~id-~a~G~~~~~~e~I~~ir~~~~~~---------~Vi~G~ 148 (361)
T 3r2g_A 82 QEFKKCKG---PVFVSVGCTENELQRAEALRDAGADFFCVD-VAHAHAKYVGKTLKSLRQLLGSR---------CIMAGN 148 (361)
T ss_dssp HHHHTCCS---CCBEEECSSHHHHHHHHHHHHTTCCEEEEE-CSCCSSHHHHHHHHHHHHHHTTC---------EEEEEE
T ss_pred HHHhhcce---EEEEEcCCCHHHHHHHHHHHHcCCCEEEEe-CCCCCcHhHHHHHHHHHHhcCCC---------eEEEcC
Confidence 99987653 2333334443 44566689999999999 89999877666665555554433 356677
Q ss_pred cCchhHHH-HHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEeeCcccHHHHHhhccccccccccCCceEeeecCCCH
Q psy3862 449 TSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDV 527 (671)
Q Consensus 449 v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi 527 (671)
+.|.+.++ +.++|||+|+||+ ++| +.|+|+.+ .|+|.|+++++.+++..+. -..++|+ |++++|+
T Consensus 149 V~T~e~A~~a~~aGaD~I~Vg~-g~G-~~~~tr~~--------~g~g~p~l~aI~~~~~~~~-PVIAdGG---I~~~~di 214 (361)
T 3r2g_A 149 VATYAGADYLASCGADIIKAGI-GGG-SVCSTRIK--------TGFGVPMLTCIQDCSRADR-SIVADGG---IKTSGDI 214 (361)
T ss_dssp ECSHHHHHHHHHTTCSEEEECC-SSS-SCHHHHHH--------HCCCCCHHHHHHHHTTSSS-EEEEESC---CCSHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEEcC-CCC-cCcccccc--------CCccHHHHHHHHHHHHhCC-CEEEECC---CCCHHHH
Confidence 88988888 6799999999996 888 89998753 4688999999999876543 2345554 7899999
Q ss_pred HHHHH-----HHHhhHhHhccccCcccccccCCcceEEEecccccccccchhhhcccccccceeeccccccccccccccc
Q psy3862 528 NDTVQ-----DILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFI 602 (671)
Q Consensus 528 ~kAia-----vMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~ 602 (671)
.|||+ ||+|++|++++|||++.+. +.+| +++|.||||+|. +.+
T Consensus 215 ~kALa~GAd~V~iGr~f~~t~Espg~~~~------------------------~~~g-~~~k~y~Gm~s~-------~~~ 262 (361)
T 3r2g_A 215 VKALAFGADFVMIGGMLAGSAPTPGEVFQ------------------------KDDG-SKVKRYRGMASR-------EAQ 262 (361)
T ss_dssp HHHHHTTCSEEEESGGGTTBTTSSSCEEE------------------------CTTS-CEEEEESCCHHH-------HHH
T ss_pred HHHHHcCCCEEEEChHHhCCccCCceeEE------------------------ecCC-eEEEEEecCCCc-------chh
Confidence 99999 9999999999999988422 1146 578999999993 457
Q ss_pred hhccc--cccccCCCceEecccccCHHHHHHHHHHHHhhhccccCcccccccccccEEEEeccc
Q psy3862 603 RCTAQ--LNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ 664 (671)
Q Consensus 603 r~~~~--~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~el~~~a~Fvrvt~q 664 (671)
||+.. .++++|||++++|||||||+++|++|+|||||+|+|+|+++|+|||+|++|||||++
T Consensus 263 ~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~m~y~G~~~i~~l~~~~~~~~~~~~ 326 (361)
T 3r2g_A 263 EAFLGQMHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQRKLNYVIVTQA 326 (361)
T ss_dssp HHHTTCCSTTCCSCCCCEEEECBCCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHTCCEEECCST
T ss_pred hhhhccccccccCCcceeecCCCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhCCeEEEEccc
Confidence 77753 255699999999999999999999999999999999999999999999999999987
No 9
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=100.00 E-value=7e-52 Score=465.61 Aligned_cols=382 Identities=32% Similarity=0.505 Sum_probs=257.6
Q ss_pred hccccccccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecC
Q psy3862 9 MAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKY 88 (671)
Q Consensus 9 ~~~~~~~~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n 88 (671)
|....+...+||||||+|+|++++++| ++||++|+|| +++.+++|+++++|+++++.+||++++++||+|+||+|
T Consensus 25 ~~~~~~~~~~~t~~d~~~~p~~~~~~~-~~~~~~t~lt----~~i~l~iPivsa~MdtvTe~~lAia~a~~GgiGvIh~~ 99 (511)
T 3usb_A 25 MWESKFVKEGLTFDDVLLVPAKSDVLP-REVSVKTVLS----ESLQLNIPLISAGMDTVTEADMAIAMARQGGLGIIHKN 99 (511)
T ss_dssp HHHTTTTCCCCCGGGEEECCCCCCCCT-TTSBCCEEEE----TTEEESSSEEECSCTTTCSHHHHHHHHHHTCEEEECSS
T ss_pred hhhhhhccCCcceEEEEEECCcccccc-cceEeeeEee----cccccCCCccccCchhhcHHHHHHHHHhcCCceeeccc
Confidence 444455678999999999999999987 6999999999 89999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhhc---Ccc--cccceEEecCCC--------------------------------hh--------------
Q psy3862 89 YTLEEWKAFAVQ---NPD--VIKHVAVSSGIS--------------------------------AK-------------- 117 (671)
Q Consensus 89 ~~~Eeq~~~i~~---~p~--~~~~~~v~~G~~--------------------------------~~-------------- 117 (671)
+++++|.+.+++ ..+ ...++.+.+..+ .+
T Consensus 100 ~~~~~q~~~V~~V~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~~~~~~~V~~ 179 (511)
T 3usb_A 100 MSIEQQAEQVDKVKRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQDYSIKISD 179 (511)
T ss_dssp SCHHHHHHHHHHHHTSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTCCCSSSBHHH
T ss_pred CCHHHHHHHHHHhhccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhhccCCCcHHH
Confidence 999998766531 100 000111100000 00
Q ss_pred --------------hHHHHHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCCce-------EEEEEe----cc
Q psy3862 118 --------------DLAGLKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPKHV-------IIAGNV----VT 170 (671)
Q Consensus 118 --------------d~~rl~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~~~-------li~g~v----~t 170 (671)
.++.+.++|....-....++|..... .-...+.++.+ .+|... .+++.+ .+
T Consensus 180 vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~--~~p~a~~D~~~rl~V~aavg~~~d~ 257 (511)
T 3usb_A 180 VMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVI--EFPNSAKDKQGRLLVGAAVGVTADA 257 (511)
T ss_dssp HCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH--HCTTCCBCTTSCBCCEEEECSSTTH
T ss_pred hcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhh--hcccchhhhccceeeeeeeeeccch
Confidence 11222222222111223444432211 01122333332 233321 222333 23
Q ss_pred HHHHHHHHHCCCcEEEECcCCCce-----EEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEEEcccCC
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSV-----CTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPG 245 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~-----~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~ 245 (671)
.+++++|+++|+|+|++|.++||. .++++++.+|++++ ++|||.|.+.++.|.++|||+|+||+|+|
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~v--------i~g~v~t~e~a~~~~~aGad~i~vg~g~g 329 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNI--------IAGNVATAEATKALIEAGANVVKVGIGPG 329 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEE--------EEEEECSHHHHHHHHHHTCSEEEECSSCS
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceE--------EeeeeccHHHHHHHHHhCCCEEEECCCCc
Confidence 688999999999999999999975 12333333333222 68999999999999999999999999999
Q ss_pred CccccceecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeecc
Q psy3862 246 SVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRN 325 (671)
Q Consensus 246 ~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~ 325 (671)
|+||||.+.|+|.||++++.+|+++++++
T Consensus 330 si~~~~~~~g~g~p~~~~l~~v~~~~~~~--------------------------------------------------- 358 (511)
T 3usb_A 330 SICTTRVVAGVGVPQLTAVYDCATEARKH--------------------------------------------------- 358 (511)
T ss_dssp TTCCHHHHHCCCCCHHHHHHHHHHHHHTT---------------------------------------------------
T ss_pred cccccccccCCCCCcHHHHHHHHHHHHhC---------------------------------------------------
Confidence 99999999999999999999999988742
Q ss_pred CCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcE
Q psy3862 326 SGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADF 405 (671)
Q Consensus 326 s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~ 405 (671)
++|||+
T Consensus 359 ------~iPVIa-------------------------------------------------------------------- 364 (511)
T 3usb_A 359 ------GIPVIA-------------------------------------------------------------------- 364 (511)
T ss_dssp ------TCCEEE--------------------------------------------------------------------
T ss_pred ------CCcEEE--------------------------------------------------------------------
Confidence 478887
Q ss_pred EEEccccccccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeC
Q psy3862 406 VMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKD 485 (671)
Q Consensus 406 i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~ 485 (671)
+||+....++++++.+|||+|++|....+
T Consensus 365 ---------------------------------------~GGI~~~~di~kala~GA~~V~vGs~~~~------------ 393 (511)
T 3usb_A 365 ---------------------------------------DGGIKYSGDMVKALAAGAHVVMLGSMFAG------------ 393 (511)
T ss_dssp ---------------------------------------ESCCCSHHHHHHHHHTTCSEEEESTTTTT------------
T ss_pred ---------------------------------------eCCCCCHHHHHHHHHhCchhheecHHHhc------------
Confidence 79998999999999999999999964444
Q ss_pred CeEEEEeeCcccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEeccc
Q psy3862 486 GKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ 565 (671)
Q Consensus 486 g~~~k~g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~ 565 (671)
++|+|++. +
T Consensus 394 --------------------------------------------------------~~es~g~~---------~------ 402 (511)
T 3usb_A 394 --------------------------------------------------------VAESPGET---------E------ 402 (511)
T ss_dssp --------------------------------------------------------BTTSSSCE---------E------
T ss_pred --------------------------------------------------------CccCchhh---------h------
Confidence 34444442 1
Q ss_pred ccccccchhhhcccccccceeeccccccccccccccchhccc-cccccCCCceEecccccCHHHHHHHHHHHHhhhcccc
Q psy3862 566 LNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ-LNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYV 644 (671)
Q Consensus 566 ~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~-~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~ 644 (671)
+++| +++|.||||+|..||. .++++|||.. .++++|||++++|||||+++++|++|.+|||++|+|+
T Consensus 403 ----------~~~g-~~~k~~~gm~s~~a~~-~~~~~r~~~~~~~~~~~eG~~~~~~~~~~~~~~~~~~~~~lr~~m~~~ 470 (511)
T 3usb_A 403 ----------IYQG-RQFKVYRGMGSVGAME-KGSKDRYFQEGNKKLVPEGIEGRVPYKGPLADTVHQLVGGLRAGMGYC 470 (511)
T ss_dssp ----------ECSS-SEEEC-----------------------------------CBCCBCHHHHHHHHHHHHHHHHHHT
T ss_pred ----------hccC-eeeeeeeccccHHHHh-cccccchhccccccccCCCcEEeCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 1234 4678999999999997 5678999864 3678999999999999999999999999999999999
Q ss_pred CcccccccccccEEEEeccc
Q psy3862 645 GASKLKELPRRATFIRCTAQ 664 (671)
Q Consensus 645 Ga~~l~el~~~a~Fvrvt~q 664 (671)
|+++|+||+++++|+|+|.+
T Consensus 471 G~~~i~~l~~~~~~~~~~~~ 490 (511)
T 3usb_A 471 GAQDLEFLRENAQFIRMSGA 490 (511)
T ss_dssp TCSBHHHHHHHCCEEECCHH
T ss_pred CcccHHHHHhCCeEEEEccc
Confidence 99999999999999999964
No 10
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=100.00 E-value=1.3e-44 Score=389.12 Aligned_cols=338 Identities=67% Similarity=1.092 Sum_probs=275.8
Q ss_pred ccccccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCH
Q psy3862 12 KIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTL 91 (671)
Q Consensus 12 ~~~~~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~ 91 (671)
-|.....++||||+|+|+++.+.++++|||+|+|++++++++++++||++++|+++++.+||.|++++||+|++|.++++
T Consensus 13 ~~~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~~~~s~ 92 (351)
T 2c6q_A 13 GLVPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSL 92 (351)
T ss_dssp ------CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTTTSCHHHHHHHHHTTCEEECCTTCCH
T ss_pred cccccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCCCCcHHHHHHHHHCCCEEEEcCCCCH
Confidence 34455789999999999997765447999999999888889999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCcccccceEEecCCChhhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccH
Q psy3862 92 EEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTG 171 (671)
Q Consensus 92 Eeq~~~i~~~p~~~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~ 171 (671)
|+|..+++++|....++.+..|.+.++.+++..+++..++.+++.++..+|++..+.+.++++++.+|...++++++.+.
T Consensus 93 e~~~~~i~~~p~~l~~v~~~~g~~~~~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~ 172 (351)
T 2c6q_A 93 VQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTG 172 (351)
T ss_dssp HHHHHHHHHCGGGCTTEEEEECSSHHHHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSH
T ss_pred HHHHHHHhhCchhhheeEeecCCChHHHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCH
Confidence 99998887777656667777777777788898898876677888888888888889999999998887777777888888
Q ss_pred HHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEEEcccCCCccccc
Q psy3862 172 EMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTR 251 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr 251 (671)
+.|+.++++|||+| .|+.|+|++|+||
T Consensus 173 e~A~~a~~aGaD~I-----------------------------------------------------~v~~g~G~~~~~r 199 (351)
T 2c6q_A 173 EMVEELILSGADII-----------------------------------------------------KVGIGPGSVCTTR 199 (351)
T ss_dssp HHHHHHHHTTCSEE-----------------------------------------------------EECSSCSTTBCHH
T ss_pred HHHHHHHHhCCCEE-----------------------------------------------------EECCCCCcCcCcc
Confidence 88888888887777 6788899999999
Q ss_pred eecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceee
Q psy3862 252 LKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQ 331 (671)
Q Consensus 252 ~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~ 331 (671)
...|.|.|+++++.++++++++ .
T Consensus 200 ~~~g~~~p~~~~l~~v~~~~~~---------------------------------------------------------~ 222 (351)
T 2c6q_A 200 KKTGVGYPQLSAVMECADAAHG---------------------------------------------------------L 222 (351)
T ss_dssp HHHCBCCCHHHHHHHHHHHHHH---------------------------------------------------------T
T ss_pred ccCCCCccHHHHHHHHHHHHhh---------------------------------------------------------c
Confidence 9999999999999999988753 2
Q ss_pred CcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccc
Q psy3862 332 GVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGM 411 (671)
Q Consensus 332 ~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~ 411 (671)
++|||+
T Consensus 223 ~ipvIa-------------------------------------------------------------------------- 228 (351)
T 2c6q_A 223 KGHIIS-------------------------------------------------------------------------- 228 (351)
T ss_dssp TCEEEE--------------------------------------------------------------------------
T ss_pred CCcEEE--------------------------------------------------------------------------
Confidence 478887
Q ss_pred cccccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEE
Q psy3862 412 FAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKL 491 (671)
Q Consensus 412 a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~ 491 (671)
+||+....++++++.+|||+|++|...-++.+|+++.+..+
T Consensus 229 ---------------------------------~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~------ 269 (351)
T 2c6q_A 229 ---------------------------------DGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERD------ 269 (351)
T ss_dssp ---------------------------------ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEET------
T ss_pred ---------------------------------eCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhc------
Confidence 79998899999999999999999964444334444333222
Q ss_pred eeCcccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEeccccccccc
Q psy3862 492 FYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVND 571 (671)
Q Consensus 492 g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~ 571 (671)
T Consensus 270 -------------------------------------------------------------------------------- 269 (351)
T 2c6q_A 270 -------------------------------------------------------------------------------- 269 (351)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhcccccccceeecccccccccccc-ccchhccccccccCCCceEecccccCHHHHHHHHHHHHhhhccccCccccc
Q psy3862 572 TVQDILGGLRSACTYVGASKLKELPRRA-TFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLK 650 (671)
Q Consensus 572 ~~~~~~~G~~~~k~y~Gm~s~~a~~~~~-~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~ 650 (671)
| +++|.||||++..+|.+.+ +.+|| ..+||++.+||||||++++|.+|.++||++|+|+|+++|+
T Consensus 270 -------g-~~~k~~~g~~~~~a~~~~~g~~~~~------~~~~g~~~~~~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~ 335 (351)
T 2c6q_A 270 -------G-KKYKLFYGMSSEMAMKKYAGGVAEY------RASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLK 335 (351)
T ss_dssp -------T-EEEEEEECTTBHHHHHHHSSSCCTT------CCCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBGG
T ss_pred -------C-eeeeeccccccHhhhhccccccccc------ccccceEEEeeccCcHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 3 2456777777776665432 23344 3579999999999999999999999999999999999999
Q ss_pred ccccccEEEEeccccc
Q psy3862 651 ELPRRATFIRCTAQLN 666 (671)
Q Consensus 651 el~~~a~Fvrvt~q~n 666 (671)
||++++.|||||+|+|
T Consensus 336 ~l~~~~~~v~~~~~~~ 351 (351)
T 2c6q_A 336 ELSRRTTFIRVTQQVN 351 (351)
T ss_dssp GHHHHCCEEEC-----
T ss_pred HHhhCCcEEEEecCCC
Confidence 9999999999999999
No 11
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=100.00 E-value=6e-46 Score=404.12 Aligned_cols=322 Identities=35% Similarity=0.580 Sum_probs=244.6
Q ss_pred cccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHHH
Q psy3862 15 NDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEW 94 (671)
Q Consensus 15 ~~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Eeq 94 (671)
...+||||||+|+|+++++.| ++|||+|+|| +.+.+++||++++|+++++.+||+|+|++||||+||+|+++|+|
T Consensus 6 ~~~~~t~ddvll~P~~~~~~~-~~v~l~t~lt----~~l~l~~PIi~a~M~~Vs~~~lA~Ava~aGGlGvi~~~~~~e~~ 80 (400)
T 3ffs_A 6 IGKGLTFEDILLVPNYSEVLP-REVSLETKLT----KNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQ 80 (400)
T ss_dssp EEEECCGGGEEECCCCBCSCG-GGCCCCEESS----SSCEESSSEEECSCTTTCSSHHHHHHHTTTCEEEECSSSCHHHH
T ss_pred cccCCCceeEEEecCCCccCH-HHccCccchh----cccCCCCCEEeCCCCCcCcHHHHHHHHHCCCEEEeCCCCCHHHH
Confidence 356899999999999999987 7999999998 78999999999999999999999999999999999999999999
Q ss_pred HHhhhc----------Cccc-------------------------------cc--ceEEecCCChhhHHHHHHHHHhCCC
Q psy3862 95 KAFAVQ----------NPDV-------------------------------IK--HVAVSSGISAKDLAGLKEILAALPE 131 (671)
Q Consensus 95 ~~~i~~----------~p~~-------------------------------~~--~~~v~~G~~~~d~~rl~~l~~a~~~ 131 (671)
.+++++ .|.. .+ .+.+.++.. +.++++.++++ +
T Consensus 81 ~~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~--~~e~~~~lvea--G 156 (400)
T 3ffs_A 81 VNEVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKSNNNIDAYSNENLDNKGRLRVGAAIGVN--EIERAKLLVEA--G 156 (400)
T ss_dssp HHHHHHHHCCC-------------------------------CCTTCCBCTTSSBCCEEEECCC---CHHHHHHHHH--T
T ss_pred HHHHHHHHhhccCcccCCCCccccccCCCCCHHHHHHHHHhhhCcchhhccccceeEEeecCCC--HHHHHHHHHHc--C
Confidence 887742 1111 00 011222332 36788889998 7
Q ss_pred ceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhh
Q psy3862 132 IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQF 211 (671)
Q Consensus 132 ~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~ 211 (671)
++++++|.++|++..+.+.++++++.+ ...++++++.|.+.++.|+++|||+|
T Consensus 157 vdvIvldta~G~~~~~~e~I~~ik~~~-~i~Vi~g~V~t~e~A~~a~~aGAD~I-------------------------- 209 (400)
T 3ffs_A 157 VDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGI-------------------------- 209 (400)
T ss_dssp CSEEEECCSCCSBHHHHHHHHHHHTTC-CCEEEEEEECSHHHHHHHHHTTCSEE--------------------------
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHhcC-CCeEEEeecCCHHHHHHHHHcCCCEE--------------------------
Confidence 899999999999988999999887766 34556667667777776666666666
Q ss_pred ccccCCccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeec
Q psy3862 212 YSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIIN 291 (671)
Q Consensus 212 i~~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 291 (671)
+||++||++||||.+.++|.||++++.+|++++++
T Consensus 210 ---------------------------~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~------------------ 244 (400)
T 3ffs_A 210 ---------------------------KVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASK------------------ 244 (400)
T ss_dssp ---------------------------EECC---------CCSCBCCCHHHHHHHHHHHHTT------------------
T ss_pred ---------------------------EEeCCCCcCcccccccccchhHHHHHHHHHHHHHh------------------
Confidence 78999999999999999999999999999998863
Q ss_pred cccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHH
Q psy3862 292 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 371 (671)
Q Consensus 292 ~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~ 371 (671)
.++|||+
T Consensus 245 ---------------------------------------~~IPVIA---------------------------------- 251 (400)
T 3ffs_A 245 ---------------------------------------FGIPIIA---------------------------------- 251 (400)
T ss_dssp ---------------------------------------TTCCEEE----------------------------------
T ss_pred ---------------------------------------cCCCEEe----------------------------------
Confidence 2588888
Q ss_pred HHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCc
Q psy3862 372 AFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSP 451 (671)
Q Consensus 372 ~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t 451 (671)
+||+...
T Consensus 252 -------------------------------------------------------------------------~GGI~~~ 258 (400)
T 3ffs_A 252 -------------------------------------------------------------------------DGGIRYS 258 (400)
T ss_dssp -------------------------------------------------------------------------ESCCCSH
T ss_pred -------------------------------------------------------------------------cCCCCCH
Confidence 7998888
Q ss_pred hhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEeeCcccHHHHHhhccccccccc---------cCCceEeee
Q psy3862 452 GDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRA---------AEGKTVQVP 522 (671)
Q Consensus 452 ~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~~---------~~G~~v~i~ 522 (671)
.++++++.+|||+|++|....++.+|+++.+..+|.++|.|+||+|+.||.+ +..++|+. ++|..+.++
T Consensus 259 ~di~kalalGAd~V~vGt~f~~t~Es~~~~~~~~g~~~k~y~Gm~s~~am~~--~~~~ry~~~~~~~~~~~~eG~~~~v~ 336 (400)
T 3ffs_A 259 GDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKS--GSGDRYFQEKRPENKMVPEGIEGRVK 336 (400)
T ss_dssp HHHHHHHTTTCSEEEECGGGTTBTTSSCCEEESSSSEEEC-------------------------------------CEE
T ss_pred HHHHHHHHcCCCEEEEChHHhcCCCCCchhhhcCCeeeeeecCcchHHHHhc--cccchhhcccccccccCCCCcEEecC
Confidence 9999999999999999999999999999999999999999999999999964 34556653 667777799
Q ss_pred cCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEeccc
Q psy3862 523 YRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ 565 (671)
Q Consensus 523 ~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~ 565 (671)
|.|++.+.+..|+|++++++.++|+..++|++.+++|+.++..
T Consensus 337 ~~g~~~~~~~~~~~glr~~~~y~G~~~i~el~~~~~f~~~t~~ 379 (400)
T 3ffs_A 337 YKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKKSSYVEITTS 379 (400)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHCCEEECCC-
T ss_pred CCCCHHHHHHHHHHHHHHhhhhcCcccHHHHHhCCeEEEEccc
Confidence 9999999999999999999999999999999999999998765
No 12
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=100.00 E-value=4.4e-46 Score=418.11 Aligned_cols=324 Identities=20% Similarity=0.222 Sum_probs=252.7
Q ss_pred eccccCCCceeeeecCCCc--cCCCCcccceeeee-ec--cCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccC
Q psy3862 290 INDIKLDFKDVMLRPKRST--LKSRSEVDITRTFT-FR--NSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKY 364 (671)
Q Consensus 290 ~~~~~l~fdDVll~P~rst--~~sr~eVdl~~~l~-~~--~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~ 364 (671)
.+..+||||||||+|++|+ +.| +||||+++|+ |+ ..+++.+.+|++||+||||++.+||++|++.||+|+||++
T Consensus 5 ~~~~~~t~~d~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~iP~vsa~m~~vt~~~la~~la~~gg~G~I~~~ 83 (503)
T 1me8_A 5 YNEPCHTFNEYLLIPGLSTVDCIP-SNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIFGS 83 (503)
T ss_dssp CSSCCCCGGGEEECCCCCCTTCCG-GGCBCCEECSCEETTCCCSCEESSSEEECSCTTTCSHHHHHHHHHTTCEEEECCS
T ss_pred ccCCCcccccEEEcCCCCCCccCC-CcceeeeeccccccccccceeecCceEeccchhhhHHHHHHHHHhCCCcceeeCC
Confidence 4567999999999999999 887 8999999998 43 2447999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCccc-----------------------------------------------------c----------
Q psy3862 365 YTLEEWKAFAVQNPDV-----------------------------------------------------I---------- 381 (671)
Q Consensus 365 ~~~e~~~~~v~~~~~~-----------------------------------------------------~---------- 381 (671)
.++|++.+++.+++.. +
T Consensus 84 ~~~e~~~~~v~~V~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V 163 (503)
T 1me8_A 84 QSIESQAAMVHAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKV 163 (503)
T ss_dssp SCHHHHHHHHHHHHTTTC--------------------------------------------------------------
T ss_pred CCHHHHHHHHhhhhhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhhhccccCcH
Confidence 9999987766432100 0
Q ss_pred ----------------------------------c--------------------------------ceeeecccCh---
Q psy3862 382 ----------------------------------K--------------------------------HVADGGCTSP--- 392 (671)
Q Consensus 382 ----------------------------------~--------------------------------~v~~~~~~~~--- 392 (671)
+ .+.....++.
T Consensus 164 ~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~~~d~~~~l~v~a~v~~~~~ 243 (503)
T 1me8_A 164 SDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNELVDSQKRYLVGAGINTRDF 243 (503)
T ss_dssp ----------------------------------------------------------CCCCBCTTSCBCCEEEECSSSH
T ss_pred HHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccchhccccccccccccCchhH
Confidence 0 0000000111
Q ss_pred -hhHHHHHHcCCcEEEEcccccccccccccccccccccccc-ccccccccCceeeccccCchhHHH-HHHcCCcEEEECc
Q psy3862 393 -GDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPL-VGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVMLGG 469 (671)
Q Consensus 393 -~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~vG~ 469 (671)
+.+..++++|+|++++| +++||+....+.++.++..+|. + .++.|++.+.+.++ +.++|||+|+||+
T Consensus 244 ~e~~~~l~e~gv~~l~Vd-~~~g~~~~~~~~i~~lk~~~~~~~---------~Vi~G~V~t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 244 RERVPALVEAGADVLCID-SSDGFSEWQKITIGWIREKYGDKV---------KVGAGNIVDGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp HHHHHHHHHHTCSEEEEC-CSCCCSHHHHHHHHHHHHHHGGGS---------CEEEEEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhhhccceEEe-cccCcccchhhHHHHHHHhCCCCc---------eEeeccccCHHHHHHHHHhCCCeEEecc
Confidence 22345578899999999 8899987777766666666553 3 24567789988888 6799999999995
Q ss_pred cccCCccCCCcEEEeCCeEEEEeeCcccHHHHHhhccccccccccCCceEe------eecCCCHHHHHH-----HHHhhH
Q psy3862 470 MFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQ------VPYRGDVNDTVQ-----DILGGL 538 (671)
Q Consensus 470 ~g~G~s~ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~~~~G~~v~------i~~~Gdi~kAia-----vMlG~~ 538 (671)
|+| +.|+||.+ .++|.||++++.+++.++.+|..+.|+.++ |++++|++|||+ ||+|++
T Consensus 314 -~~g-~~~~~r~~--------~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~ 383 (503)
T 1me8_A 314 -GGG-SICITREQ--------KGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRY 383 (503)
T ss_dssp -SCS-TTCCSTTT--------TCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred -cCC-cCcccccc--------cCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECch
Confidence 999 89999864 478999999999998777766433443333 799999999999 999999
Q ss_pred hHhccccCcccccccCCcceEEEecccccccccchhhhcccccccceeeccccccccccccccchh-cc-ccccccCCCc
Q psy3862 539 RSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRC-TA-QLNNVAAEGK 616 (671)
Q Consensus 539 ~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~-~~-~~~~~~~eG~ 616 (671)
|++++|+|++. + ..+| +++|.||||+|..+|.. +|| +. ..++.+|||+
T Consensus 384 ~~~~~E~~~~~---------~----------------~~~g-~~~k~~~g~~s~~~~~~----~~~~~~~~~~~~~~eg~ 433 (503)
T 1me8_A 384 FARFEESPTRK---------V----------------TING-SVMKEYWGEGSSRARNW----QRYDLGGKQKLSFEEGV 433 (503)
T ss_dssp HHTBTTSSSCE---------E----------------EETT-EEEEEEECTTSHHHHCC------------------CCC
T ss_pred hhccccCCCce---------E----------------EECC-eEEEeecCccchhHhhc----cccccccccceecccce
Confidence 99999998883 1 2346 68899999999998863 666 32 2467899999
Q ss_pred eEecccccCHHHHHHHHHHHHhhhccccCcccccccccccEEEEeccc
Q psy3862 617 TVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ 664 (671)
Q Consensus 617 ~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~el~~~a~Fvrvt~q 664 (671)
+++|||||++++++++|.++||++|+|+|+++|+||+++++|+|+|.+
T Consensus 434 ~~~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~ 481 (503)
T 1me8_A 434 DSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQSKAKITLVSSV 481 (503)
T ss_dssp EEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCCEEECCTT
T ss_pred eEecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHHhCCCEEEEccc
Confidence 999999999999999999999999999999999999999999999864
No 13
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.4e-42 Score=371.06 Aligned_cols=319 Identities=37% Similarity=0.643 Sum_probs=277.4
Q ss_pred ccCCCCCceEEecCCcCCCCCCcce--eeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHH
Q psy3862 16 DIKLDFKDVMLRPKRSTLKSRSEVD--ITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEE 93 (671)
Q Consensus 16 ~~~l~fdDv~lvP~~~~~~~~~~Vd--lst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Ee 93 (671)
..+|+||||+|+|+.++..|+++|| ++|+| .++++++||+++||+++++.+||+|++++||+|+||+|+++|+
T Consensus 5 ~~~~~fddv~l~P~~~~~~~r~~vd~~~~t~l-----~g~~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~ee 79 (361)
T 3r2g_A 5 DQAITFDDVLLVPSYNHHESRRVVETTSTDRL-----GKLTLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEE 79 (361)
T ss_dssp -CCCCGGGEEECCCCCCSCTTCCCCCCEECTT-----SSCEESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCHHH
T ss_pred ccccccceEEEECCCCCCCccccccceeeEEE-----CCEEcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCHHH
Confidence 4789999999999999998867865 55577 5889999999999999999999999999999999999999999
Q ss_pred HHHhhhcCcccccceEEecCCChhhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHH
Q psy3862 94 WKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEM 173 (671)
Q Consensus 94 q~~~i~~~p~~~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~ 173 (671)
+.+.+++.. ..+..+.+......++++.++++ +++++++|.++|++..+.+.++++|+.+|...+++|++.|.+.
T Consensus 80 ~~~~i~~~~---~~~~~~~g~~~~~~e~~~~a~~a--GvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~ 154 (361)
T 3r2g_A 80 NIQEFKKCK---GPVFVSVGCTENELQRAEALRDA--GADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAG 154 (361)
T ss_dssp HHHHHHTCC---SCCBEEECSSHHHHHHHHHHHHT--TCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHH
T ss_pred HHHHHhhcc---eEEEEEcCCCHHHHHHHHHHHHc--CCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHH
Confidence 998886532 23444556666667888899998 7899999999999988889999998888777777777777777
Q ss_pred HHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEEEcccCCCcccccee
Q psy3862 174 VEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLK 253 (671)
Q Consensus 174 a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V 253 (671)
++.|+++|||+| +||++||++|+||.+
T Consensus 155 A~~a~~aGaD~I-----------------------------------------------------~Vg~g~G~~~~tr~~ 181 (361)
T 3r2g_A 155 ADYLASCGADII-----------------------------------------------------KAGIGGGSVCSTRIK 181 (361)
T ss_dssp HHHHHHTTCSEE-----------------------------------------------------EECCSSSSCHHHHHH
T ss_pred HHHHHHcCCCEE-----------------------------------------------------EEcCCCCcCcccccc
Confidence 777777777766 889999999999999
Q ss_pred cccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCc
Q psy3862 254 TGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGV 333 (671)
Q Consensus 254 ~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~i 333 (671)
.|+|.||+++|.+|++++ .
T Consensus 182 ~g~g~p~l~aI~~~~~~~------------------------------------------------------------~- 200 (361)
T 3r2g_A 182 TGFGVPMLTCIQDCSRAD------------------------------------------------------------R- 200 (361)
T ss_dssp HCCCCCHHHHHHHHTTSS------------------------------------------------------------S-
T ss_pred CCccHHHHHHHHHHHHhC------------------------------------------------------------C-
Confidence 999999999999998532 1
Q ss_pred ceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccc
Q psy3862 334 PIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFA 413 (671)
Q Consensus 334 PiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~ 413 (671)
|||+
T Consensus 201 PVIA---------------------------------------------------------------------------- 204 (361)
T 3r2g_A 201 SIVA---------------------------------------------------------------------------- 204 (361)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred CEEE----------------------------------------------------------------------------
Confidence 7777
Q ss_pred cccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEe-CCeEEEEe
Q psy3862 414 GHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEK-DGKKVKLF 492 (671)
Q Consensus 414 gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~-~g~~~k~g 492 (671)
+||+....++++++.+|||+|++|....++.+|+++.+.. +|.++|.|
T Consensus 205 -------------------------------dGGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y 253 (361)
T 3r2g_A 205 -------------------------------DGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRY 253 (361)
T ss_dssp -------------------------------ESCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEE
T ss_pred -------------------------------ECCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEE
Confidence 7998888999999999999999999999999999999998 99999999
Q ss_pred eCcccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEeccc
Q psy3862 493 YGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ 565 (671)
Q Consensus 493 ~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~ 565 (671)
+||+|.++.....+...+|..++|..+.++|.|++.+.+..|+|++++++.++|+..++|++.+++|+.++.+
T Consensus 254 ~Gm~s~~~~~~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~m~y~G~~~i~~l~~~~~~~~~~~~ 326 (361)
T 3r2g_A 254 RGMASREAQEAFLGQMHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQRKLNYVIVTQA 326 (361)
T ss_dssp SCCHHHHHHHHHTTCCSTTCCSCCCCEEEECBCCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHTCCEEECCST
T ss_pred ecCCCcchhhhhhccccccccCCcceeecCCCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhCCeEEEEccc
Confidence 9999976655444444566678999999999999999999999999999999999999999999999998775
No 14
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=100.00 E-value=5e-40 Score=367.57 Aligned_cols=374 Identities=32% Similarity=0.507 Sum_probs=261.6
Q ss_pred ccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHHHH
Q psy3862 16 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 95 (671)
Q Consensus 16 ~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Eeq~ 95 (671)
..+||||||+|+|+++++.| ++||++++|| +.+.+.+||++++|+++++.+++.++++.||+|+||+|+++|++.
T Consensus 12 ~~~~~~dd~~~~p~~~~~~~-~~v~l~t~lt----~~l~l~~PIi~a~m~~vt~~ela~ava~~GglG~i~~~~~~e~~~ 86 (486)
T 2cu0_A 12 IKGYTFDDVLLIPQATEVEP-KDVDVSTRIT----PNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMGIEEQV 86 (486)
T ss_dssp CCCCCGGGEEECCCCCSSCS-TTCBCCEEEE----TTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSCHHHHH
T ss_pred CCCcCccCEEEcCCcCCCCc-ceEEEEeeec----CCcccccceEEccceeecHHHHHHHHHhcCCceeecCCCCHHHHH
Confidence 47999999999999999987 6999999998 789999999999999999999999999999999999999998876
Q ss_pred Hhhh---cCcc--cccceEEecCCChhhH-----------------HH-----------------HHHHHHhCC-----C
Q psy3862 96 AFAV---QNPD--VIKHVAVSSGISAKDL-----------------AG-----------------LKEILAALP-----E 131 (671)
Q Consensus 96 ~~i~---~~p~--~~~~~~v~~G~~~~d~-----------------~r-----------------l~~l~~a~~-----~ 131 (671)
+++. +..+ ....+.+....+..+. ++ +.++|...+ +
T Consensus 87 ~~I~~v~~~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~~~~~~~v~~im~~~~~~v~~~ 166 (486)
T 2cu0_A 87 EQVKRVKRAERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAAREGKLVKELMTKEVITVPES 166 (486)
T ss_dssp HHHHHHHTCC----------------------------------------------------------------------
T ss_pred HHHHhhcchhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhccCCCCCHHHHccCCCeEECCc
Confidence 6553 1111 0011111000000000 00 111111000 0
Q ss_pred --------------c-eEEEeeccCCCChHHHHHHHHHHH--hCCC------ce-EEEEEecc--HHHHHHHHHCCCcEE
Q psy3862 132 --------------I-EYICLDVANGYTQTFVDFVRRIRE--MYPK------HV-IIAGNVVT--GEMVEELILSGADVI 185 (671)
Q Consensus 132 --------------~-d~Ivld~a~G~~~~~~~~ik~lr~--~~P~------~~-li~g~v~t--~e~a~~Li~AGaD~I 185 (671)
. .+.++|.. |....++. .+++.+ .+|. .. ++.+.+.. .+++..++++|+|++
T Consensus 167 ~~l~eal~~m~~~~~~~lpVVde~-g~lvGiiT-~~Dil~~~~~~~~~~~~~g~~~v~~~~~~~~~~~a~~l~~~gvd~l 244 (486)
T 2cu0_A 167 IEVEEALKIMIENRIDRLPVVDER-GKLVGLIT-MSDLVARKKYKNAVRDENGELLVAAAVSPFDIKRAIELDKAGVDVI 244 (486)
T ss_dssp ------------------------------------------CCTTCCBCTTSCBCCEEEECTTCHHHHHHHHHTTCSEE
T ss_pred CcHHHHHHHHHHcCCCEEEEEecC-CeEEEEEE-HHHHHHhhhccccccccCCceeecceechhhHHHHHHHHHhcCCce
Confidence 0 00111110 00000000 111111 1221 12 23333322 578899999999999
Q ss_pred EECcCCCceE--EE---EecccCCcchhhhhccccC-CccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcc
Q psy3862 186 KVGIGPGSVC--TT---RLKNKTSDFFLIQFYSCIP-QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYP 259 (671)
Q Consensus 186 vVdga~G~~~--~t---~v~~~~~~~~~i~~i~~~p-~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~ 259 (671)
++|+++||.. .. .+++.+ .+| ++|||.+.+.+++|+ |||+|+||+|+||+|+||.++|+|.|
T Consensus 245 vvdta~G~~~~~L~~I~~l~~~~----------~vpvi~k~v~~~~~a~~l~--G~d~v~vg~g~g~~~~~r~~~~~g~~ 312 (486)
T 2cu0_A 245 VVDTAHAHNLKAIKSMKEMRQKV----------DADFIVGNIANPKAVDDLT--FADAVKVGIGPGSICTTRIVAGVGVP 312 (486)
T ss_dssp EEECSCCCCHHHHHHHHHHHHTC----------CSEEEEEEECCHHHHTTCT--TSSEEEECSSCSTTBCHHHHTCCCCC
T ss_pred EEEecCCcEeehhhHHHHHHHHh----------CCccccCCcCCHHHHHHhh--CCCeEEEeeeeccceeeeEEeecCcc
Confidence 9999999851 11 111111 245 799999999999998 99999999999999999999999999
Q ss_pred hhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecC
Q psy3862 260 QFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAAN 339 (671)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~ 339 (671)
|++++.+|++.+++ .++|||+
T Consensus 313 ~~~~l~~~~~~~~~---------------------------------------------------------~~vpVia-- 333 (486)
T 2cu0_A 313 QITAVAMVADRAQE---------------------------------------------------------YGLYVIA-- 333 (486)
T ss_dssp HHHHHHHHHHHHHH---------------------------------------------------------HTCEEEE--
T ss_pred hHHHHHHHHHHHHH---------------------------------------------------------cCCcEEe--
Confidence 99999999988764 2578887
Q ss_pred CCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccccccccc
Q psy3862 340 MDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSG 419 (671)
Q Consensus 340 MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~ 419 (671)
T Consensus 334 -------------------------------------------------------------------------------- 333 (486)
T 2cu0_A 334 -------------------------------------------------------------------------------- 333 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEeeCcccHH
Q psy3862 420 GELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTT 499 (671)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~G~~q~t 499 (671)
+||+....++++++.+|||+|++|....++.+|+++.+..+|.++|.++|+++..
T Consensus 334 -------------------------~GGi~~~~di~kalalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~ 388 (486)
T 2cu0_A 334 -------------------------DGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLG 388 (486)
T ss_dssp -------------------------ESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHH
T ss_pred -------------------------cCCCCCHHHHHHHHHcCCCceeeChhhhcCccCchhheeeCCcEEEEeecCCCHH
Confidence 7999999999999999999999998777777888887777777888888887777
Q ss_pred HHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEecccccccccchhhhccc
Q psy3862 500 AMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDILGG 579 (671)
Q Consensus 500 Ai~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~~~~~~G 579 (671)
|+.+. ...+|+ . |
T Consensus 389 a~~~~--~~~r~~---------------------------~--------------------------------------g 401 (486)
T 2cu0_A 389 AMMKG--GAERYY---------------------------Q--------------------------------------G 401 (486)
T ss_dssp HHTC----------------------------------------------------------------------------
T ss_pred HHhcc--cccccc---------------------------c--------------------------------------c
Confidence 76531 111110 0 0
Q ss_pred ccccceeeccccccccccccccchhccccccccCCCceEecccccCHHHHHHHHHHHHhhhccccCcccccccccccEEE
Q psy3862 580 LRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFI 659 (671)
Q Consensus 580 ~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~el~~~a~Fv 659 (671)
. + ...+..++||++..+||+|++.+++++|.++||++|+|+|+.+++||++++.|+
T Consensus 402 ---------~--------------~-~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~lr~~m~~~G~~~~~~l~~~~~~~ 457 (486)
T 2cu0_A 402 ---------G--------------Y-MKTRKFVPEGVEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKGEFV 457 (486)
T ss_dssp ------------------------C-CCCSCSSCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCCEE
T ss_pred ---------c--------------c-cccccccccceEEeecccCCHHHHHHHHHHHHHHhcccCCcCCHHHHHhhCCEE
Confidence 0 0 011345799999999999999999999999999999999999999999999999
Q ss_pred Eecc
Q psy3862 660 RCTA 663 (671)
Q Consensus 660 rvt~ 663 (671)
|+|.
T Consensus 458 ~~~~ 461 (486)
T 2cu0_A 458 IITH 461 (486)
T ss_dssp ECCH
T ss_pred EEcc
Confidence 9985
No 15
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=100.00 E-value=4.9e-38 Score=351.35 Aligned_cols=375 Identities=34% Similarity=0.492 Sum_probs=269.2
Q ss_pred ccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHHHH
Q psy3862 16 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 95 (671)
Q Consensus 16 ~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Eeq~ 95 (671)
..+||||||+|+|+++.+.| ++||++++|+ +.+.+++||++++|+++++.+|+.++++.||+|+||.++++|++.
T Consensus 9 ~~~~~~~d~~~~p~~~~~~p-~~v~~~t~lt----~~l~~~~Piv~a~M~~vt~~eLa~av~~~Gg~G~i~~~~~~e~~~ 83 (491)
T 1zfj_A 9 KKGYTFDDVLLIPAESHVLP-NEVDLKTKLA----DNLTLNIPIITAAMDTVTGSKMAIAIARAGGLGVIHKNMSITEQA 83 (491)
T ss_dssp CCCCCGGGEEECCCCCCSCG-GGCCCCEEEE----TTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHHHHH
T ss_pred ccCCChhhEEeccCcCCcCc-cccccchhhh----hcceecCceEecCchhccHHHHHHHHHHcCCceEEeCCCCHHHHH
Confidence 37999999999999999988 7999999998 789999999999999999999999999999999999999998876
Q ss_pred HhhhcC---cc--cccceEEecCCCh------------------------------------------------------
Q psy3862 96 AFAVQN---PD--VIKHVAVSSGISA------------------------------------------------------ 116 (671)
Q Consensus 96 ~~i~~~---p~--~~~~~~v~~G~~~------------------------------------------------------ 116 (671)
+++.+. .+ ...++.+....+.
T Consensus 84 ~~i~~v~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~~~~~~v~~im~~~~~ 163 (491)
T 1zfj_A 84 EEVRKVKRSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISDYNAPISEHMTSEHL 163 (491)
T ss_dssp HHHHHHHHHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCSCSSSBTTTSCCCSCC
T ss_pred HHHHHHhhHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhccCCCcHHHHcCCCCC
Confidence 655310 00 0001111100000
Q ss_pred ------hhHHHHHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCC----Cc-eEEEEEec----cHHHHHHHHH
Q psy3862 117 ------KDLAGLKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYP----KH-VIIAGNVV----TGEMVEELIL 179 (671)
Q Consensus 117 ------~d~~rl~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P----~~-~li~g~v~----t~e~a~~Li~ 179 (671)
..++.+.+++....-....++|..+.. .-...+.++.+.+..+ .. ..+++.+. +.++++.|++
T Consensus 164 ~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~ 243 (491)
T 1zfj_A 164 VTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFE 243 (491)
T ss_dssp CCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHH
Confidence 012222222222111122333322110 0111222222221000 11 12333332 3689999999
Q ss_pred CCCcEEEECcCCCceE-----EEEecccCCcchhhhhccccC-CccccccHHHHHHHHHcCCCEEEEcccCCCcccccee
Q psy3862 180 SGADVIKVGIGPGSVC-----TTRLKNKTSDFFLIQFYSCIP-QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLK 253 (671)
Q Consensus 180 AGaD~IvVdga~G~~~-----~t~v~~~~~~~~~i~~i~~~p-~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V 253 (671)
+|+|+|++++++||.. +.++++.+| .+| ++||+.|.+.+++++++|||+|.||+|+||+|+||.+
T Consensus 244 ~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p---------~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~ 314 (491)
T 1zfj_A 244 AGADAIVIDTAHGHSAGVLRKIAEIRAHFP---------NRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVV 314 (491)
T ss_dssp HTCSEEEECCSCTTCHHHHHHHHHHHHHCS---------SSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHH
T ss_pred cCCCeEEEeeecCcchhHHHHHHHHHHHCC---------CCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeee
Confidence 9999999999988741 111222122 234 6999999999999999999999999999999999999
Q ss_pred cccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCc
Q psy3862 254 TGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGV 333 (671)
Q Consensus 254 ~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~i 333 (671)
.+.|.|+++++.+++.+++. .++
T Consensus 315 ~~~~~p~~~~l~~~~~~~~~---------------------------------------------------------~~i 337 (491)
T 1zfj_A 315 AGVGVPQVTAIYDAAAVARE---------------------------------------------------------YGK 337 (491)
T ss_dssp TCCCCCHHHHHHHHHHHHHH---------------------------------------------------------TTC
T ss_pred cCCCCCcHHHHHHHHHHHhh---------------------------------------------------------cCC
Confidence 99999999999999988764 247
Q ss_pred ceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccc
Q psy3862 334 PIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFA 413 (671)
Q Consensus 334 PiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~ 413 (671)
|||+
T Consensus 338 pvia---------------------------------------------------------------------------- 341 (491)
T 1zfj_A 338 TIIA---------------------------------------------------------------------------- 341 (491)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred CEEe----------------------------------------------------------------------------
Confidence 8887
Q ss_pred cccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEee
Q psy3862 414 GHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFY 493 (671)
Q Consensus 414 gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~ 493 (671)
+||+....++++++.+|||+|++|...-++.+++++.+...|.++|.++
T Consensus 342 -------------------------------~GGi~~~~di~kal~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~ 390 (491)
T 1zfj_A 342 -------------------------------DGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYR 390 (491)
T ss_dssp -------------------------------ESCCCSHHHHHHHHHTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEE
T ss_pred -------------------------------eCCCCCHHHHHHHHHcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEe
Confidence 7998889999999999999999998666656677776666666677777
Q ss_pred CcccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEecccccccccch
Q psy3862 494 GMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTV 573 (671)
Q Consensus 494 G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~ 573 (671)
|+++..|+.+
T Consensus 391 g~~~~~a~~~---------------------------------------------------------------------- 400 (491)
T 1zfj_A 391 GMGSIAAMKK---------------------------------------------------------------------- 400 (491)
T ss_dssp CTTSHHHHCC----------------------------------------------------------------------
T ss_pred cccCHHHHhc----------------------------------------------------------------------
Confidence 7666666542
Q ss_pred hhhcccccccceeeccccccccccccccchhcc----ccccccCCCceEecccccCHHHHHHHHHHHHhhhccccCcccc
Q psy3862 574 QDILGGLRSACTYVGASKLKELPRRATFIRCTA----QLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKL 649 (671)
Q Consensus 574 ~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~----~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l 649 (671)
.+..||+. ..+...+||+++.++|+|++.+++.+|.++||++|+|+|+.++
T Consensus 401 -------------------------~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G~~~~ 455 (491)
T 1zfj_A 401 -------------------------GSSDRYFQGSVNEANKLVPEGIEGRVAYKGAASDIVFQMLGGIRSGMGYVGAGDI 455 (491)
T ss_dssp ---------------------------------------CCCCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSH
T ss_pred -------------------------cccccccccccccccccCcCcceEecCcCCCHHHHHHHHHHHHHHHhhhcCcccH
Confidence 11122221 1134579999999999999999999999999999999999999
Q ss_pred cccccccEEEEecc
Q psy3862 650 KELPRRATFIRCTA 663 (671)
Q Consensus 650 ~el~~~a~Fvrvt~ 663 (671)
+||++++.|+|+|+
T Consensus 456 ~~l~~~~~~~~~~~ 469 (491)
T 1zfj_A 456 QELHENAQFVEMSG 469 (491)
T ss_dssp HHHHHHCCEEECCH
T ss_pred HHHHhcCcEEEEcc
Confidence 99999999999974
No 16
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=100.00 E-value=1e-37 Score=350.18 Aligned_cols=382 Identities=25% Similarity=0.378 Sum_probs=266.4
Q ss_pred cccccCCCCCceEEecCCcC--CCCCCcceeeeeeec-c--cCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeec
Q psy3862 13 IINDIKLDFKDVMLRPKRST--LKSRSEVDITRTFTF-R--NSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHK 87 (671)
Q Consensus 13 ~~~~~~l~fdDv~lvP~~~~--~~~~~~Vdlst~lt~-r--~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~ 87 (671)
++++.+||||||+|+|++++ +.| ++|||+|+||+ | -..++.+.+|+++++|+++++.+||.+|++.||+|+||+
T Consensus 4 ~~~~~~~t~~d~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~iP~vsa~m~~vt~~~la~~la~~gg~G~I~~ 82 (503)
T 1me8_A 4 YYNEPCHTFNEYLLIPGLSTVDCIP-SNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGISFIFG 82 (503)
T ss_dssp CCSSCCCCGGGEEECCCCCCTTCCG-GGCBCCEECSCEETTCCCSCEESSSEEECSCTTTCSHHHHHHHHHTTCEEEECC
T ss_pred cccCCCcccccEEEcCCCCCCccCC-CcceeeeeccccccccccceeecCceEeccchhhhHHHHHHHHHhCCCcceeeC
Confidence 34567999999999999999 887 79999999981 0 011799999999999999999999999999999999999
Q ss_pred CCCHHHHHHhhhc---Ccc--cccceEEec--------------------------------C-CChhhHH--------H
Q psy3862 88 YYTLEEWKAFAVQ---NPD--VIKHVAVSS--------------------------------G-ISAKDLA--------G 121 (671)
Q Consensus 88 n~~~Eeq~~~i~~---~p~--~~~~~~v~~--------------------------------G-~~~~d~~--------r 121 (671)
|+++|++.+++.+ ... ...++.+.. | ++..|+. .
T Consensus 83 ~~~~e~~~~~v~~V~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~ 162 (503)
T 1me8_A 83 SQSIESQAAMVHAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETK 162 (503)
T ss_dssp SSCHHHHHHHHHHHHTTTC-------------------------------------------------------------
T ss_pred CCCHHHHHHHHhhhhhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhhhccccCc
Confidence 9999988766531 100 000110100 1 0111111 1
Q ss_pred HHHHHHhC--C-----Cc---------------eEEEeeccCCCChHHHHHHHHHHH--hCCC------ceEEE-EEec-
Q psy3862 122 LKEILAAL--P-----EI---------------EYICLDVANGYTQTFVDFVRRIRE--MYPK------HVIIA-GNVV- 169 (671)
Q Consensus 122 l~~l~~a~--~-----~~---------------d~Ivld~a~G~~~~~~~~ik~lr~--~~P~------~~li~-g~v~- 169 (671)
+.++|... + +. ...++|.. |....++. .+++.+ .+|. ..++. .++.
T Consensus 163 V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~-g~lvGiIT-~~Dil~~~~~~~~~~d~~~~l~v~a~v~~ 240 (503)
T 1me8_A 163 VSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDD-QHLRYIVF-RKDYDRSQVCHNELVDSQKRYLVGAGINT 240 (503)
T ss_dssp -------------------------------------------------------------CCCCBCTTSCBCCEEEECS
T ss_pred HHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCC-CeEEEEEE-ecHHHHhhhcccchhccccccccccccCc
Confidence 12222210 0 00 00111110 11111110 112211 1121 11222 2322
Q ss_pred --cHHHHHHHHHCCCcEEEECcCCCceE-----EEEecccCCcchhhhhccc-cC-CccccccHHHHHHHHHcCCCEEEE
Q psy3862 170 --TGEMVEELILSGADVIKVGIGPGSVC-----TTRLKNKTSDFFLIQFYSC-IP-QAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 170 --t~e~a~~Li~AGaD~IvVdga~G~~~-----~t~v~~~~~~~~~i~~i~~-~p-~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
..+.++.|+++|+|++++|.++|+.. +..+++.+| . +| ++|||.|.+.++.|+++|||+++|
T Consensus 241 ~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~---------~~~~Vi~G~V~t~~~a~~l~~aGad~I~V 311 (503)
T 1me8_A 241 RDFRERVPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYG---------DKVKVGAGNIVDGEGFRYLADAGADFIKI 311 (503)
T ss_dssp SSHHHHHHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHG---------GGSCEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred hhHHHHHHHHHhhhccceEEecccCcccchhhHHHHHHHhCC---------CCceEeeccccCHHHHHHHHHhCCCeEEe
Confidence 25678899999999999999998741 111221111 2 44 689999999999999999999999
Q ss_pred cccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceee
Q psy3862 241 GIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRT 320 (671)
Q Consensus 241 G~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~ 320 (671)
|+||||+||||.++|+|.||++++.+|+++++++
T Consensus 312 g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~---------------------------------------------- 345 (503)
T 1me8_A 312 GIGGGSICITREQKGIGRGQATAVIDVVAERNKY---------------------------------------------- 345 (503)
T ss_dssp CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHH----------------------------------------------
T ss_pred cccCCcCcccccccCCCCchHHHHHHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999999998642
Q ss_pred eeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHH
Q psy3862 321 FTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMG 400 (671)
Q Consensus 321 l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~ 400 (671)
+. .+..++|||+
T Consensus 346 --~~---~~~~~ipvia--------------------------------------------------------------- 357 (503)
T 1me8_A 346 --FE---ETGIYIPVCS--------------------------------------------------------------- 357 (503)
T ss_dssp --HH---HHSEECCEEE---------------------------------------------------------------
T ss_pred --hh---hcCCCceEEE---------------------------------------------------------------
Confidence 00 0012588888
Q ss_pred cCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCc
Q psy3862 401 AGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 480 (671)
Q Consensus 401 aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~ 480 (671)
+||+....++++++.+|||+|++|....++.+|+++
T Consensus 358 --------------------------------------------~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~ 393 (503)
T 1me8_A 358 --------------------------------------------DGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTR 393 (503)
T ss_dssp --------------------------------------------ESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSC
T ss_pred --------------------------------------------eCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCc
Confidence 799999999999999999999999888898999999
Q ss_pred EEEeCCeEEEEeeCcccHHHHHh----hccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCc
Q psy3862 481 LIEKDGKKVKLFYGMSSTTAMDK----HAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRR 556 (671)
Q Consensus 481 ~v~~~g~~~k~g~G~~q~tAi~~----~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~ 556 (671)
.+..+|.++|.+||+++..|+.. +.+ ..++..++|....++|.|.+.+.+..+++++.+++.++|...++|+..+
T Consensus 394 ~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~-~~~~~~~eg~~~~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~~~ 472 (503)
T 1me8_A 394 KVTINGSVMKEYWGEGSSRARNWQRYDLGG-KQKLSFEEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQSK 472 (503)
T ss_dssp EEEETTEEEEEEECTTSHHHHCC---------------CCCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred eEEECCeEEEeecCccchhHhhcccccccc-ccceecccceeEecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHHhC
Confidence 99999999999999999999842 111 1244568898888999999999999999999999999999999999988
Q ss_pred ceEEEeccc
Q psy3862 557 ATFIRCTAQ 565 (671)
Q Consensus 557 a~fv~~~~~ 565 (671)
+.|+.++..
T Consensus 473 ~~~~~~~~~ 481 (503)
T 1me8_A 473 AKITLVSSV 481 (503)
T ss_dssp CCEEECCTT
T ss_pred CCEEEEccc
Confidence 889987654
No 17
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=100.00 E-value=2.4e-36 Score=338.11 Aligned_cols=373 Identities=36% Similarity=0.590 Sum_probs=244.5
Q ss_pred ccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHHHH
Q psy3862 16 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 95 (671)
Q Consensus 16 ~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Eeq~ 95 (671)
..+||||||+|+|+++.+.|. +||++++|| +.+.+.+|+++++|+++++..||.++++.||+|+||+++++|++.
T Consensus 14 ~~~~~~~dvll~p~~s~~~p~-~v~~~~eLt----~~~~l~iP~is~~m~~v~~~~lA~al~~~GglG~i~~~~~~e~~~ 88 (494)
T 1vrd_A 14 KEALTFDDVLLVPQYSEVLPK-DVKIDTRLT----RQIRINIPLVSAAMDTVTEAALAKALAREGGIGIIHKNLTPDEQA 88 (494)
T ss_dssp CCCCCGGGEEECCCCCCCCGG-GSCCCEESS----SSCEESSSEEECCCTTTCSHHHHHHHHTTTCEEEECSSSCHHHHH
T ss_pred ccccccccEEeccccccCCCC-ceEEEehhh----CCCccCceeEecchHHHhHHHHHHHHHHcCCceEEecCCChHHHH
Confidence 468999999999999999986 999999998 789999999999999999999999999999999999999999886
Q ss_pred Hhhhc---Cccc--ccceEEe-----------------------------cC-CChhhHH-------HHHHHHHh--CC-
Q psy3862 96 AFAVQ---NPDV--IKHVAVS-----------------------------SG-ISAKDLA-------GLKEILAA--LP- 130 (671)
Q Consensus 96 ~~i~~---~p~~--~~~~~v~-----------------------------~G-~~~~d~~-------rl~~l~~a--~~- 130 (671)
+++.+ ..+. ..++.+. .| ++..|+. .+.++|.. .+
T Consensus 89 ~~v~~v~~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~ 168 (494)
T 1vrd_A 89 RQVSIVKKTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEKNLSKKIKDLMTPREKLI 168 (494)
T ss_dssp HHHHHHHTC-----------------------------------------------------------------------
T ss_pred HHHHhhhhHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhcCCCCcHHHHhCCCCCCe
Confidence 66531 1110 0001000 01 1111111 11222221 00
Q ss_pred ----C--------------ce-EEEeeccCCCChHHH---HHHHHHHHhCCC-------ceEEEEEecc----HHHHHHH
Q psy3862 131 ----E--------------IE-YICLDVANGYTQTFV---DFVRRIREMYPK-------HVIIAGNVVT----GEMVEEL 177 (671)
Q Consensus 131 ----~--------------~d-~Ivld~a~G~~~~~~---~~ik~lr~~~P~-------~~li~g~v~t----~e~a~~L 177 (671)
+ .. ..++|. ++....++ +.++.+ .+|. -..+++++.+ .++++.|
T Consensus 169 ~v~~~~~l~ea~~~m~~~~~~~lpVVd~-~g~lvGiIt~~Dll~~~--~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l 245 (494)
T 1vrd_A 169 VAPPDISLEKAKEILHQHRIEKLPLVSK-DNKLVGLITIKDIMSVI--EHPNAARDEKGRLLVGAAVGTSPETMERVEKL 245 (494)
T ss_dssp -----------------------------------------CHHHH--TCTTCCBCTTSCBCCEEEECSSTTHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEcC-CCeEEEEEEHHHHHhhh--ccccccccchhhhccccccCcCHhHHHHHHHH
Confidence 0 00 011110 01100111 111111 1232 1234555544 6899999
Q ss_pred HHCCCcEEEECcCCCce-----EEEEecccCCcchhhhhccccC-CccccccHHHHHHHHHcCCCEEEEcccCCCccccc
Q psy3862 178 ILSGADVIKVGIGPGSV-----CTTRLKNKTSDFFLIQFYSCIP-QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTR 251 (671)
Q Consensus 178 i~AGaD~IvVdga~G~~-----~~t~v~~~~~~~~~i~~i~~~p-~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr 251 (671)
+++|+|+|.++.++|+. .+.++++.+|. +| +.||+.|.+.++.|.++|||+|.||.++|++|+|+
T Consensus 246 ~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~---------~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~ 316 (494)
T 1vrd_A 246 VKAGVDVIVIDTAHGHSRRVIETLEMIKADYPD---------LPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTR 316 (494)
T ss_dssp HHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTT---------SCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHH
T ss_pred HHhCCCEEEEEecCCchHHHHHHHHHHHHHCCC---------ceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCcccccc
Confidence 99999999999998863 11122222222 34 57999999999999999999999999999999999
Q ss_pred eecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceee
Q psy3862 252 LKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQ 331 (671)
Q Consensus 252 ~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~ 331 (671)
...+.|.|+++++.++++++++ .
T Consensus 317 ~~~~~g~p~~~~l~~v~~~~~~---------------------------------------------------------~ 339 (494)
T 1vrd_A 317 VVAGVGVPQLTAVMECSEVARK---------------------------------------------------------Y 339 (494)
T ss_dssp HHHCCCCCHHHHHHHHHHHHHT---------------------------------------------------------T
T ss_pred ccCCCCccHHHHHHHHHHHHhh---------------------------------------------------------c
Confidence 9999999999999999988753 2
Q ss_pred CcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccc
Q psy3862 332 GVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGM 411 (671)
Q Consensus 332 ~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~ 411 (671)
++|||+
T Consensus 340 ~ipvia-------------------------------------------------------------------------- 345 (494)
T 1vrd_A 340 DVPIIA-------------------------------------------------------------------------- 345 (494)
T ss_dssp TCCEEE--------------------------------------------------------------------------
T ss_pred CCCEEE--------------------------------------------------------------------------
Confidence 578887
Q ss_pred cccccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEE
Q psy3862 412 FAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKL 491 (671)
Q Consensus 412 a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~ 491 (671)
+||+....++++++.+|||+|++|...-++.+|++......
T Consensus 346 ---------------------------------~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~------ 386 (494)
T 1vrd_A 346 ---------------------------------DGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQ------ 386 (494)
T ss_dssp ---------------------------------ESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEET------
T ss_pred ---------------------------------ECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEEC------
Confidence 79988888999999999999999863333333333332222
Q ss_pred eeCcccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEeccccccccc
Q psy3862 492 FYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVND 571 (671)
Q Consensus 492 g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~ 571 (671)
T Consensus 387 -------------------------------------------------------------------------------- 386 (494)
T 1vrd_A 387 -------------------------------------------------------------------------------- 386 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhcccccccceeeccccccccccccccchhcccc-ccccCCCceEecccccCHHHHHHHHHHHHhhhccccCccccc
Q psy3862 572 TVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQL-NNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLK 650 (671)
Q Consensus 572 ~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~-~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~ 650 (671)
| +.+|.||||++..+|.. .+..||+... +..++||+++.++|+|++.++++++.++||++|+|+|+.+++
T Consensus 387 -------~-~~~k~~~g~~~~~a~~~-g~~~~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~l~~~l~~~~~~~G~~~~~ 457 (494)
T 1vrd_A 387 -------G-RKYKAYRGMGSLGAMRS-GSADRYGQEGENKFVPEGIEGMVPYKGTVKDVVHQLVGGLRSGMGYIGARTIK 457 (494)
T ss_dssp -------T-EEEEECBCCC--------------------------CBCCEECCBCHHHHHHHHHHHHHHHHHHHTCSSHH
T ss_pred -------C-EEEEEEeccchHHHHhh-ccccchhhcccccccCCcceEccCcCCCHHHHHHHHHHHHHHHhhhcCCCCHH
Confidence 3 23456777777666653 2445555422 445799999999999999999999999999999999999999
Q ss_pred ccccccEEEEeccc
Q psy3862 651 ELPRRATFIRCTAQ 664 (671)
Q Consensus 651 el~~~a~Fvrvt~q 664 (671)
||++++.|+|+|+.
T Consensus 458 ~l~~~~~~~~~~~~ 471 (494)
T 1vrd_A 458 ELQEKAVFVKITPA 471 (494)
T ss_dssp HHHHHCCEEECC--
T ss_pred HHHhhCCEEEEccc
Confidence 99999999999853
No 18
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=100.00 E-value=8e-35 Score=327.49 Aligned_cols=355 Identities=26% Similarity=0.379 Sum_probs=213.8
Q ss_pred ccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHHHH
Q psy3862 16 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 95 (671)
Q Consensus 16 ~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Eeq~ 95 (671)
..+|+||||+|+|+++.+.| ..++|+++|| +.+.+.+|+++++|+++++.+|++++++.||+|++|.|+++|++.
T Consensus 27 ~ralt~ddvlLmp~~s~~~p-~~v~l~~eLt----~~~~~~iP~vsa~md~~t~~~la~~ia~~gg~gii~~~~t~e~~~ 101 (514)
T 1jcn_A 27 ADDLTYNDFLILPGFIDFIA-DEVDLTSALT----RKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIHHNCTPEFQA 101 (514)
T ss_dssp SSCCCGGGEEECCCCCCSCG-GGCBCCEESS----SSCEESSCEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHHHHH
T ss_pred CcccccCcEEeccCccCCCc-ceeEEEeecc----CCeeEeceEEEEehhhhhhhhHHHHHHhcCCeeEEecCCCHHHHH
Confidence 37999999999999999987 6999999998 789999999999999999999999999999999999999999987
Q ss_pred Hhhhc----------Ccccccc----------e--------EE-e--------cC-CChhhH---------HHHHHHHHh
Q psy3862 96 AFAVQ----------NPDVIKH----------V--------AV-S--------SG-ISAKDL---------AGLKEILAA 128 (671)
Q Consensus 96 ~~i~~----------~p~~~~~----------~--------~v-~--------~G-~~~~d~---------~rl~~l~~a 128 (671)
+++++ .|.+..+ + -+ . .| ++.+|+ ..+.++|..
T Consensus 102 ~~v~~v~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~ 181 (514)
T 1jcn_A 102 NEVRKVKNFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTP 181 (514)
T ss_dssp HHHHHHHTCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC----------------C
T ss_pred HHHHhhhhhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCC
Confidence 66521 1111000 0 00 0 01 011111 112223321
Q ss_pred --CC-------------------C-ceEEEeeccC----------------------------------CCChHHHHHHH
Q psy3862 129 --LP-------------------E-IEYICLDVAN----------------------------------GYTQTFVDFVR 152 (671)
Q Consensus 129 --~~-------------------~-~d~Ivld~a~----------------------------------G~~~~~~~~ik 152 (671)
.+ + ....++|..+ |......+.++
T Consensus 182 ~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~~~~~~~~~rl~vga~vG~~~~~~~~a~ 261 (514)
T 1jcn_A 182 RIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLD 261 (514)
T ss_dssp CBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCCCTTCCBCTTSCBCCEEEECSSTTHHHHHH
T ss_pred CCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhhCcchhcccCCceeeeeEecCchhhHHHHH
Confidence 00 0 0011222100 00123455555
Q ss_pred HHHHhCCCceEEEEEeccH----HHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccccC-CccccccHHHH
Q psy3862 153 RIREMYPKHVIIAGNVVTG----EMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIP-QAGNVVTGEMV 227 (671)
Q Consensus 153 ~lr~~~P~~~li~g~v~t~----e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p-~aGnV~t~~~a 227 (671)
.+.+.......+-.+-... +..+++.+. +|+ +| ++|+|.|.+.+
T Consensus 262 ~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~----------------------~~~---------~pvi~~~v~t~~~a 310 (514)
T 1jcn_A 262 LLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK----------------------YPH---------LQVIGGNVVTAAQA 310 (514)
T ss_dssp HHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH----------------------CTT---------CEEEEEEECSHHHH
T ss_pred HHHHcCCCEEEeeccCCcchhHHHHHHHHHHh----------------------CCC---------CceEecccchHHHH
Confidence 5544332222221111111 223333222 111 12 35678888888
Q ss_pred HHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCC
Q psy3862 228 EELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRS 307 (671)
Q Consensus 228 ~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rs 307 (671)
+.|.++|||+|.||+|||++||||.+.+.|.||.+++..|++.++.
T Consensus 311 ~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~---------------------------------- 356 (514)
T 1jcn_A 311 KNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARR---------------------------------- 356 (514)
T ss_dssp HHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGG----------------------------------
T ss_pred HHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhh----------------------------------
Confidence 8888888888899999999999999999999999999999988763
Q ss_pred ccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeee
Q psy3862 308 TLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADG 387 (671)
Q Consensus 308 t~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~ 387 (671)
.++|||+
T Consensus 357 -----------------------~~ipVia-------------------------------------------------- 363 (514)
T 1jcn_A 357 -----------------------FGVPIIA-------------------------------------------------- 363 (514)
T ss_dssp -----------------------GTCCEEE--------------------------------------------------
T ss_pred -----------------------CCCCEEE--------------------------------------------------
Confidence 2588887
Q ss_pred cccChhhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEE
Q psy3862 388 GCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVML 467 (671)
Q Consensus 388 ~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~v 467 (671)
+||+....++++++.+|||+|++
T Consensus 364 ---------------------------------------------------------~GGI~~~~di~kala~GAd~V~i 386 (514)
T 1jcn_A 364 ---------------------------------------------------------DGGIQTVGHVVKALALGASTVMM 386 (514)
T ss_dssp ---------------------------------------------------------ESCCCSHHHHHHHHHTTCSEEEE
T ss_pred ---------------------------------------------------------ECCCCCHHHHHHHHHcCCCeeeE
Confidence 79987788999999999999999
Q ss_pred CccccCCccCCCcEEEeCCeEEEEeeCcccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCc
Q psy3862 468 GGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGA 547 (671)
Q Consensus 468 G~~g~G~s~ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g 547 (671)
|...-++.+|+++.....
T Consensus 387 G~~~l~~~e~~~~~~~~~-------------------------------------------------------------- 404 (514)
T 1jcn_A 387 GSLLAATTEAPGEYFFSD-------------------------------------------------------------- 404 (514)
T ss_dssp STTTTTSTTSSCC-------------------------------------------------------------------
T ss_pred CHHHHcCCcCCcceEeEC--------------------------------------------------------------
Confidence 975555444544332111
Q ss_pred ccccccCCcceEEEecccccccccchhhhcccccccceeeccccccccccc-cccchhcccc-ccccCCCceEecccccC
Q psy3862 548 SKLKELPRRATFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRR-ATFIRCTAQL-NNVAAEGKTVQVPYRGD 625 (671)
Q Consensus 548 ~~i~e~~~~a~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~-~~~~r~~~~~-~~~~~eG~~~~v~~kG~ 625 (671)
| +.+|.||||+|.++|.+. ++.+||+.+. +.+.+||+++.|+|+|+
T Consensus 405 -------------------------------g-~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~g~ 452 (514)
T 1jcn_A 405 -------------------------------G-VRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGS 452 (514)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred -------------------------------C-EEEEEecCcCCHHHHhhccccchhhccccccceecccceecCCCccc
Confidence 1 134567888887777643 3456776443 35689999999999999
Q ss_pred HHHHHHHHHHHHhhhccccCcccccccccc-----cEEEEeccc
Q psy3862 626 VNDTVQDILGGLRSACTYVGASKLKELPRR-----ATFIRCTAQ 664 (671)
Q Consensus 626 v~~~l~~l~gGLrs~m~y~Ga~~l~el~~~-----a~Fvrvt~q 664 (671)
+.++|.+|.++||++|+|+|+++|+||+++ ++|+++|.+
T Consensus 453 ~~~~i~~l~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~~~ 496 (514)
T 1jcn_A 453 IQKFVPYLIAGIQHGCQDIGARSLSVLRSMMYSGELKFEKRTMS 496 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSBHHHHHHHHHTTCSCEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHhhCcccHHHHHhhcccCceEEEEechh
Confidence 999999999999999999999999999998 888888764
No 19
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=100.00 E-value=7.1e-34 Score=310.85 Aligned_cols=330 Identities=35% Similarity=0.599 Sum_probs=237.6
Q ss_pred ccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHHHH
Q psy3862 16 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 95 (671)
Q Consensus 16 ~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Eeq~ 95 (671)
..+++||||+|+|+.+.+.+ ++|||+++|+ ++++++.||+.+||+++++.++|.+++++||+|+++.++++|++.
T Consensus 7 ~~~~~fd~v~l~p~~~~~~~-~~vdlst~l~----~g~~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~~~~s~e~~~ 81 (404)
T 1eep_A 7 KEALTFDDVSLIPRKSSVLP-SEVSLKTQLT----KNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQR 81 (404)
T ss_dssp CCCCCGGGEEECCCCCCSCG-GGCCCCEESS----SSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEECSSSCHHHHH
T ss_pred ccCCCcccEEEccCCCCcCc-cccccceecc----CCcccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHH
Confidence 36899999999999988654 7999999996 589999999999999999999999999999999999999999875
Q ss_pred Hhhhc---C-----------------------------------------ccccc------ceEEecCCChhhHHHHHHH
Q psy3862 96 AFAVQ---N-----------------------------------------PDVIK------HVAVSSGISAKDLAGLKEI 125 (671)
Q Consensus 96 ~~i~~---~-----------------------------------------p~~~~------~~~v~~G~~~~d~~rl~~l 125 (671)
..+.+ . |...+ .+.++.+...+..+++..+
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~~~~~~~a~~~ 161 (404)
T 1eep_A 82 KEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSIDIDTIERVEEL 161 (404)
T ss_dssp HHHHHHHTCC--------------------------------------CCTTCCBCTTSCBCCEEEECSCTTHHHHHHHH
T ss_pred HHHHHHHhhccCCCceeccccccccccccccCCCCCHHHHHHHHHHhhhcchhhhhcccCceEEEEeCCChhHHHHHHHH
Confidence 54421 1 10000 1233444444456777777
Q ss_pred HHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCc
Q psy3862 126 LAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSD 205 (671)
Q Consensus 126 ~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~ 205 (671)
+++ +.+++.++..++++..+.+.++++++.+|...++++++.+.+.++.++++|||+|
T Consensus 162 ~~~--G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I-------------------- 219 (404)
T 1eep_A 162 VKA--HVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCL-------------------- 219 (404)
T ss_dssp HHT--TCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEE--------------------
T ss_pred HHC--CCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEE--------------------
Confidence 777 7788888888888878888898888877765666667777777777777777777
Q ss_pred chhhhhccccCCccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchhhhhhc
Q psy3862 206 FFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFLTAM 285 (671)
Q Consensus 206 ~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (671)
.||.++|++|+|+...+.|.||++++.+++++++.
T Consensus 220 ---------------------------------~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~------------ 254 (404)
T 1eep_A 220 ---------------------------------KVGIGPGSICTTRIVAGVGVPQITAICDVYEACNN------------ 254 (404)
T ss_dssp ---------------------------------EECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTT------------
T ss_pred ---------------------------------EECCCCCcCcCccccCCCCcchHHHHHHHHHHHhh------------
Confidence 56778888999999999999999999999887642
Q ss_pred cceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCC
Q psy3862 286 AQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYY 365 (671)
Q Consensus 286 ~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~ 365 (671)
.++|||+
T Consensus 255 ---------------------------------------------~~ipVia---------------------------- 261 (404)
T 1eep_A 255 ---------------------------------------------TNICIIA---------------------------- 261 (404)
T ss_dssp ---------------------------------------------SSCEEEE----------------------------
T ss_pred ---------------------------------------------cCceEEE----------------------------
Confidence 2588888
Q ss_pred CHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCceee
Q psy3862 366 TLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVD 445 (671)
Q Consensus 366 ~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 445 (671)
+
T Consensus 262 -------------------------------------------------------------------------------~ 262 (404)
T 1eep_A 262 -------------------------------------------------------------------------------D 262 (404)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------E
Confidence 7
Q ss_pred ccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEeeCcccHHHHHhhccccccccccCCceEeeecCC
Q psy3862 446 GGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRG 525 (671)
Q Consensus 446 gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~G 525 (671)
||+....++++++.+|||+|++|.-.-++.+|++......|..
T Consensus 263 GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~------------------------------------- 305 (404)
T 1eep_A 263 GGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKK------------------------------------- 305 (404)
T ss_dssp SCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEE-------------------------------------
T ss_pred CCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCcchhhhCCeE-------------------------------------
Confidence 9976778889999999999999963333344444443333333
Q ss_pred CHHHHHHHHHhhHhHhccccCcccccccCCcceEEEecccccccccchhhhcccccccceeeccccccccccccccchhc
Q psy3862 526 DVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCT 605 (671)
Q Consensus 526 di~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~ 605 (671)
+|.||||++..+|.+ ++.+||+
T Consensus 306 ---------------------------------------------------------~k~~~g~~~~g~~~~-g~~~~~~ 327 (404)
T 1eep_A 306 ---------------------------------------------------------FKSYVGMGSISAMKR-GSKSRYF 327 (404)
T ss_dssp ---------------------------------------------------------EEC--------------------
T ss_pred ---------------------------------------------------------EeecCCCCCHHHHhh-ccccchh
Confidence 345566665555542 2224443
Q ss_pred c----ccccccCCCceEecccccCHHHHHHHHHHHHhhhccccCcccccccccccEEEEeccc
Q psy3862 606 A----QLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQ 664 (671)
Q Consensus 606 ~----~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~el~~~a~Fvrvt~q 664 (671)
. +.+..++||+++.|+|+|++++++.+|.++||+.|+|+|+++|+||++++.|+|+|++
T Consensus 328 ~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~~~G~~~i~~l~~~~~~~~~~~~ 390 (404)
T 1eep_A 328 QLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKFVKISHS 390 (404)
T ss_dssp -----------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCEEECCCC
T ss_pred cccccccccccCceeEEeccCCccHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCcEEEEchh
Confidence 2 1234579999999999999999999999999999999999999999999999999854
No 20
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=100.00 E-value=1e-35 Score=320.92 Aligned_cols=233 Identities=24% Similarity=0.319 Sum_probs=192.7
Q ss_pred ceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCC
Q psy3862 287 QKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYT 366 (671)
Q Consensus 287 ~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~ 366 (671)
|++ .+.+||||||||+|++|++.|+ ||||+|+|+ +.+++++|||+||||+|++++||+++++.||||+||++++
T Consensus 7 ~~~-~~~~~~fddv~lvp~~~~~~~~-~vdl~t~lt----~~~~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~~s 80 (366)
T 4fo4_A 7 LRI-AKEALTFDDVLLVPAHSTVLPN-TADLRTRLT----KNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMS 80 (366)
T ss_dssp SCC-CCCCCCGGGEEECCCCCCCCGG-GCBCCEEEE----TTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSC
T ss_pred hhh-hcccCCcceEEEECCCCCCChh-hcccceecc----cccccCCCEEeCCCCCCChHHHHHHHHHcCCceEeecCCC
Confidence 344 4689999999999999999995 999999998 5788999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccc-ceeeecccC---hhhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCc
Q psy3862 367 LEEWKAFAVQNPDVIK-HVADGGCTS---PGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGG 442 (671)
Q Consensus 367 ~e~~~~~v~~~~~~~~-~v~~~~~~~---~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (671)
+|+|.++++++++.-+ .+....+++ .++++.++++|+|+|+|| ++|||+...++.++.++..||.+
T Consensus 81 ~e~~~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~id-ta~G~~~~~~~~I~~ik~~~p~v--------- 150 (366)
T 4fo4_A 81 IEQQAAQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLID-SSHGHSEGVLQRIRETRAAYPHL--------- 150 (366)
T ss_dssp HHHHHHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEE-CSCTTSHHHHHHHHHHHHHCTTC---------
T ss_pred HHHHHHHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEe-CCCCCCHHHHHHHHHHHHhcCCC---------
Confidence 9999999987655322 233333333 356677799999999999 99999988888777777666654
Q ss_pred eeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEeeCcccHHHHHhhccccccc---cccCCce
Q psy3862 443 VVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEY---RAAEGKT 518 (671)
Q Consensus 443 ~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y---~~~~G~~ 518 (671)
.+++|++.+.+.++ +.++|||+|+||+ +|| +.|+|+.+ .++|.||++++.+++..+..+ ..++|+
T Consensus 151 ~Vi~G~v~t~e~A~~a~~aGAD~I~vG~-gpG-s~~~tr~~--------~g~g~p~~~~l~~v~~~~~~~~iPVIA~GG- 219 (366)
T 4fo4_A 151 EIIGGNVATAEGARALIEAGVSAVKVGI-GPG-SICTTRIV--------TGVGVPQITAIADAAGVANEYGIPVIADGG- 219 (366)
T ss_dssp EEEEEEECSHHHHHHHHHHTCSEEEECS-SCS-TTBCHHHH--------HCCCCCHHHHHHHHHHHHGGGTCCEEEESC-
T ss_pred ceEeeeeCCHHHHHHHHHcCCCEEEEec-CCC-CCCCcccc--------cCcccchHHHHHHHHHHHhhcCCeEEEeCC-
Confidence 34678889999888 5799999999996 999 99999863 478999999999877544332 133443
Q ss_pred EeeecCCCHHHHHH-----HHHhhHhHhccccCcc
Q psy3862 519 VQVPYRGDVNDTVQ-----DILGGLRSACTYVGAS 548 (671)
Q Consensus 519 v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~ 548 (671)
|.+++|++||++ ||+|+.|++++|||++
T Consensus 220 --I~~~~di~kala~GAd~V~vGs~f~~t~Esp~~ 252 (366)
T 4fo4_A 220 --IRFSGDISKAIAAGASCVMVGSMFAGTEEAPGE 252 (366)
T ss_dssp --CCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSC
T ss_pred --CCCHHHHHHHHHcCCCEEEEChHhhcCCCCCch
Confidence 789999999999 9999999999998887
No 21
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=100.00 E-value=8.6e-33 Score=295.58 Aligned_cols=316 Identities=33% Similarity=0.521 Sum_probs=237.2
Q ss_pred ccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCCCHHHHH
Q psy3862 16 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 95 (671)
Q Consensus 16 ~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~~~Eeq~ 95 (671)
...++||||+|+|+.++..+.+++||+++|+ +++++.||+.++|++++..++|.++++.||+|+++.++. +...
T Consensus 11 ~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~-----g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~-~~~~ 84 (336)
T 1ypf_A 11 GNVFDYEDIQLIPAKCIVNSRSECDTTVTLG-----KHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQP-EKRI 84 (336)
T ss_dssp -CCCCGGGEEECCCCCCCSSGGGCBCCEEET-----TEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSG-GGHH
T ss_pred cccCCcceEEEecccCCCCCcccCcceEEEC-----CEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCC-HHHH
Confidence 4679999999999999988889999999995 689999999999999999999999999999999887643 3344
Q ss_pred HhhhcCcccccceEEecCCChhhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHH
Q psy3862 96 AFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVE 175 (671)
Q Consensus 96 ~~i~~~p~~~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~ 175 (671)
+++++......++.+..|..++++++++.+.++.+..+++.+|.++|++....+.++++++.+|...++.|++.+.+.|+
T Consensus 85 ~~i~~~~~~g~~v~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~ 164 (336)
T 1ypf_A 85 SFIRDMQSRGLIASISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVR 164 (336)
T ss_dssp HHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHH
T ss_pred HHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHH
Confidence 44433211112455556777777788888888743378888888888888888999999888876667777788888888
Q ss_pred HHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEEEcccCCCccccceecc
Q psy3862 176 ELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTG 255 (671)
Q Consensus 176 ~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~g 255 (671)
.++++|||+|+ |+..+|..|+|+...+
T Consensus 165 ~a~~aGad~Iv-----------------------------------------------------vs~hgG~~~~~~~~~~ 191 (336)
T 1ypf_A 165 ELENAGADATK-----------------------------------------------------VGIGPGKVCITKIKTG 191 (336)
T ss_dssp HHHHHTCSEEE-----------------------------------------------------ECSSCSTTCHHHHHHS
T ss_pred HHHHcCCCEEE-----------------------------------------------------EecCCCceeecccccC
Confidence 88888888884 4445677888999999
Q ss_pred cCcc--hhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCc
Q psy3862 256 VGYP--QFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGV 333 (671)
Q Consensus 256 v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~i 333 (671)
.|.| ++.++.+++++. ++
T Consensus 192 ~g~~g~~~~~l~~v~~~~------------------------------------------------------------~i 211 (336)
T 1ypf_A 192 FGTGGWQLAALRWCAKAA------------------------------------------------------------SK 211 (336)
T ss_dssp CSSTTCHHHHHHHHHHTC------------------------------------------------------------SS
T ss_pred cCCchhHHHHHHHHHHHc------------------------------------------------------------CC
Confidence 9999 999999888643 47
Q ss_pred ceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccc
Q psy3862 334 PIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFA 413 (671)
Q Consensus 334 PiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~ 413 (671)
|||+
T Consensus 212 pVIa---------------------------------------------------------------------------- 215 (336)
T 1ypf_A 212 PIIA---------------------------------------------------------------------------- 215 (336)
T ss_dssp CEEE----------------------------------------------------------------------------
T ss_pred cEEE----------------------------------------------------------------------------
Confidence 8887
Q ss_pred cccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEee
Q psy3862 414 GHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFY 493 (671)
Q Consensus 414 gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~ 493 (671)
+||+....++++++.+|||+|++|...-
T Consensus 216 -------------------------------~GGI~~g~Dv~kalalGAdaV~iGr~~l--------------------- 243 (336)
T 1ypf_A 216 -------------------------------DGGIRTNGDVAKSIRFGATMVMIGSLFA--------------------- 243 (336)
T ss_dssp -------------------------------ESCCCSTHHHHHHHHTTCSEEEESGGGT---------------------
T ss_pred -------------------------------eCCCCCHHHHHHHHHcCCCEEEeChhhh---------------------
Confidence 7998888899999999999999985221
Q ss_pred CcccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEecccccccccch
Q psy3862 494 GMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTV 573 (671)
Q Consensus 494 G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~ 573 (671)
+++|+|++.+
T Consensus 244 -----------------------------------------------~t~Es~~~~~----------------------- 253 (336)
T 1ypf_A 244 -----------------------------------------------GHEESPGETI----------------------- 253 (336)
T ss_dssp -----------------------------------------------TCTTSSSCCC-----------------------
T ss_pred -----------------------------------------------ccccCCCcee-----------------------
Confidence 2334443321
Q ss_pred hhhcccccccceeeccccccccccccccchhccccccccCCCceEecccccCHHHHHHHHHHHHhhhccccCcccccccc
Q psy3862 574 QDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELP 653 (671)
Q Consensus 574 ~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~el~ 653 (671)
+.+| +.+|.||||++..++. .++.|||++..+||||++.+++.++.++||++|+|+|+++++||+
T Consensus 254 --~~~g-~~~k~~~g~~~~~~~g------------~~~~~~g~~~~~~~~g~~~~~~~~l~~el~~~m~~~G~~~i~el~ 318 (336)
T 1ypf_A 254 --EKDG-KLYKEYFGSASEFQKG------------EKKNVEGKKMFVEHKGSLEDTLIEMEQDLQSSISYAGGTKLDSIR 318 (336)
T ss_dssp --------------------------------------CTTSCCSSSSCCCCHHHHHHHHHHHHHHHHHHTTSSBGGGGG
T ss_pred --eeCC-eEeeeeecccchhhcc------------CccccccceeeecccccHHHHHHHHHHHHHHHHHHhCcccHHHhC
Confidence 1124 2457899999864321 234699999999999999999999999999999999999999995
Q ss_pred cccEEEEeccc
Q psy3862 654 RRATFIRCTAQ 664 (671)
Q Consensus 654 ~~a~Fvrvt~q 664 (671)
++.|++++.+
T Consensus 319 -~~~~~~~~~~ 328 (336)
T 1ypf_A 319 -TVDYVVVKNS 328 (336)
T ss_dssp -GCCEEECSCC
T ss_pred -cCCEEEEccc
Confidence 6899999653
No 22
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.98 E-value=3.4e-33 Score=312.85 Aligned_cols=230 Identities=25% Similarity=0.353 Sum_probs=189.8
Q ss_pred ccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHH
Q psy3862 291 NDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEW 370 (671)
Q Consensus 291 ~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~ 370 (671)
-..+||||||||+|++|++.| ++|||+++|+ +++.+++||+||+|||||+.+||++|++.||+|+||+++++|+|
T Consensus 7 ~~~~~t~~d~~~~p~~~~~~~-~~~~~~t~lt----~~i~l~iPivsa~MdtVTe~~ma~a~a~~GGiGvI~~n~s~e~q 81 (496)
T 4fxs_A 7 AKEALTFDDVLLVPAHSTVLP-NTADLRTRLT----KNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQ 81 (496)
T ss_dssp CSCCCCGGGEEECCCCCCCCG-GGCBCCEEEE----TTEEESSSEEECCCTTTCSHHHHHHHHHHTCEEEECSSSCHHHH
T ss_pred cccCcCcccEEEecCcccccc-ccccccceec----cccccCCCceecCcchhhHHHHHHHHHHcCCcceecCCCCHHHH
Confidence 367999999999999999998 7999999998 68999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcc----------------------------------------------------------------------c
Q psy3862 371 KAFAVQNPD----------------------------------------------------------------------V 380 (671)
Q Consensus 371 ~~~v~~~~~----------------------------------------------------------------------~ 380 (671)
.+++.+++. +
T Consensus 82 a~~V~~Vk~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~~~~~~v~diM~p~~~~ 161 (496)
T 4fxs_A 82 AAQVHQVKIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFVTDLTKSVAAVMTPKERL 161 (496)
T ss_dssp HHHHHHHHHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCCCTTSBGGGTSEEGGGC
T ss_pred HHHHHhccccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcccCCCcHHHHhcCCCCC
Confidence 887654200 0
Q ss_pred -----------------------c-------------------c---------------ceeeecccCh---hhHHHHHH
Q psy3862 381 -----------------------I-------------------K---------------HVADGGCTSP---GDVAKAMG 400 (671)
Q Consensus 381 -----------------------~-------------------~---------------~v~~~~~~~~---~~~~~l~~ 400 (671)
+ + .+.++.++.+ +++.++++
T Consensus 162 vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~p~a~~d~~grL~v~aavG~~~d~~~~a~~l~~ 241 (496)
T 4fxs_A 162 ATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERVKALVE 241 (496)
T ss_dssp CEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCCTTCCBCTTSCBCCEEECCSSSCCHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhcccchhhhcccceeeeeeeccccchHHHHHHHHh
Confidence 0 0 0112222222 45566789
Q ss_pred cCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEECccccCCccCCC
Q psy3862 401 AGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGG 479 (671)
Q Consensus 401 aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt 479 (671)
+|+|+|+|| ++|+|+...+++++.++..||.+ .|.+||+.+.+.++ +.++|||+|+||+ |+| +.|+|
T Consensus 242 aG~d~I~id-~a~g~~~~~~~~i~~ir~~~p~~---------~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~-g~G-s~~~t 309 (496)
T 4fxs_A 242 AGVDVLLID-SSHGHSEGVLQRIRETRAAYPHL---------EIIGGNVATAEGARALIEAGVSAVKVGI-GPG-SICTT 309 (496)
T ss_dssp TTCSEEEEE-CSCTTSHHHHHHHHHHHHHCTTC---------CEEEEEECSHHHHHHHHHHTCSEEEECS-SCC-TTBCH
T ss_pred ccCceEEec-cccccchHHHHHHHHHHHHCCCc---------eEEEcccCcHHHHHHHHHhCCCEEEECC-CCC-cCccc
Confidence 999999999 99999998899888888777655 24568889999988 5699999999996 999 99999
Q ss_pred cEEEeCCeEEEEeeCcccHHHHHhhcccccccc---ccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCcc
Q psy3862 480 ELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYR---AAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGAS 548 (671)
Q Consensus 480 ~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~---~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~ 548 (671)
|.+ .|+|.|+.+++.+++..+.++. .++|+ |.+++|++||++ ||+|++|++++|+|++
T Consensus 310 r~~--------~g~g~p~~~~i~~v~~~~~~~~iPVIa~GG---I~~~~di~kala~GAd~V~iGs~f~~t~Espg~ 375 (496)
T 4fxs_A 310 RIV--------TGVGVPQITAIADAAGVANEYGIPVIADGG---IRFSGDISKAIAAGASCVMVGSMFAGTEEAPGE 375 (496)
T ss_dssp HHH--------HCCCCCHHHHHHHHHHHHGGGTCCEEEESC---CCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSC
T ss_pred ccc--------cCCCccHHHHHHHHHHHhccCCCeEEEeCC---CCCHHHHHHHHHcCCCeEEecHHHhcCCCCCcc
Confidence 874 5789999999999876654431 34443 799999999999 9999999999988876
No 23
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.97 E-value=8.8e-33 Score=298.00 Aligned_cols=229 Identities=21% Similarity=0.239 Sum_probs=186.0
Q ss_pred ccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHH
Q psy3862 291 NDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEW 370 (671)
Q Consensus 291 ~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~ 370 (671)
.+.+||||||+|+|++|++.| +||||+|+|+ +.+++++||+++|||+|++++||+++++.||+++||+++++++|
T Consensus 9 ~~~~~~fddv~l~p~~~~~~~-~~vdl~t~l~----~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~~~~s~e~~ 83 (361)
T 3khj_A 9 IGKGLTFEDILLVPNYSEVLP-REVSLETKLT----KNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNMDMESQ 83 (361)
T ss_dssp EEECCCGGGEEECCCCBCCCG-GGCCCCEESS----SSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEECSSSCHHHH
T ss_pred cccCCCcceEEEECCCCCCCH-HHccCceecc----cccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEecCCCHHHH
Confidence 367999999999999999998 9999999997 56889999999999999999999999999999999999999999
Q ss_pred HHHHhcCcccc-cceeeecccC-hhhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCceeeccc
Q psy3862 371 KAFAVQNPDVI-KHVADGGCTS-PGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGC 448 (671)
Q Consensus 371 ~~~v~~~~~~~-~~v~~~~~~~-~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~ 448 (671)
.++++++++.- ..+.+..++. .++++.++++|+|+|+|| ++|||+....+.++.++..+ +..++.|+
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld-~a~G~~~~~~~~i~~i~~~~----------~~~Vivg~ 152 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLD-SAHGHSLNIIRTLKEIKSKM----------NIDVIVGN 152 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEEC-CSCCSBHHHHHHHHHHHHHC----------CCEEEEEE
T ss_pred HHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEe-CCCCCcHHHHHHHHHHHHhc----------CCcEEEcc
Confidence 99998764321 1233333444 466677799999999999 89999876666655444433 22345567
Q ss_pred cCchhHHH-HHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEeeCcccHHHHHhhccccccc---cccCCceEeeecC
Q psy3862 449 TSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEY---RAAEGKTVQVPYR 524 (671)
Q Consensus 449 v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y---~~~~G~~v~i~~~ 524 (671)
+.+.+.++ +.++|||+|+||+ +|| ++|+|+.+ .|+|.|+.+++.+++..+.++ ..++|+ |.++
T Consensus 153 v~t~e~A~~l~~aGaD~I~VG~-~~G-s~~~tr~~--------~g~g~p~~~~i~~v~~~~~~~~iPVIA~GG---I~~~ 219 (361)
T 3khj_A 153 VVTEEATKELIENGADGIKVGI-GPG-SICTTRIV--------AGVGVPQITAIEKCSSVASKFGIPIIADGG---IRYS 219 (361)
T ss_dssp ECSHHHHHHHHHTTCSEEEECS-SCC-TTCCHHHH--------TCBCCCHHHHHHHHHHHHHHHTCCEEEESC---CCSH
T ss_pred CCCHHHHHHHHHcCcCEEEEec-CCC-cCCCcccc--------cCCCCCcHHHHHHHHHHHhhcCCeEEEECC---CCCH
Confidence 88888888 5799999999996 999 99999864 468899999999886544332 134443 7899
Q ss_pred CCHHHHHH-----HHHhhHhHhccccCcc
Q psy3862 525 GDVNDTVQ-----DILGGLRSACTYVGAS 548 (671)
Q Consensus 525 Gdi~kAia-----vMlG~~~ag~~e~~g~ 548 (671)
+|+.||++ ||+|+.|++++|+|++
T Consensus 220 ~di~kala~GAd~V~vGs~~~~t~Esp~~ 248 (361)
T 3khj_A 220 GDIGKALAVGASSVMIGSILAGTEESPGE 248 (361)
T ss_dssp HHHHHHHHHTCSEEEESTTTTTBTTSSCE
T ss_pred HHHHHHHHcCCCEEEEChhhhcCCcCCcc
Confidence 99999999 8999999999988766
No 24
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=4e-32 Score=303.87 Aligned_cols=230 Identities=25% Similarity=0.315 Sum_probs=189.1
Q ss_pred ccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHH
Q psy3862 291 NDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEW 370 (671)
Q Consensus 291 ~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~ 370 (671)
...+||||||||+|++|++.| ++|||+++|+ +++.+++|++||+|||||+.+||++|++.||+|+||+++++|++
T Consensus 6 ~~~~~t~~d~~~~p~~~~~~~-~~~~~~t~lt----~~i~l~iPivsa~M~tVTe~~lA~ala~~GGiGvI~~~~~~e~~ 80 (490)
T 4avf_A 6 SQEALTFDDVLLIPGYSEVLP-KDVSLKTRLT----RGIELNIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQ 80 (490)
T ss_dssp EEEECCGGGEEECCCCBCSCG-GGSCCCEEEE----TTEEESSSEEECSCTTTCSHHHHHHHHHHTSEEEECCSSCHHHH
T ss_pred cCCCCCcceEEEeCCCCcccc-cceeeecccc----cCcccCCCccccchhhhCHHHHHHHHHHcCCCccccCCCCHHHH
Confidence 367999999999999999998 7999999998 68999999999999999999999999999999999999999999
Q ss_pred HHHHhcCc---c------------------------------------------------------------------c-
Q psy3862 371 KAFAVQNP---D------------------------------------------------------------------V- 380 (671)
Q Consensus 371 ~~~v~~~~---~------------------------------------------------------------------~- 380 (671)
.+++.+++ + +
T Consensus 81 a~~v~~vk~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~~~~~~~V~~vMtp~~~~v 160 (490)
T 4avf_A 81 AAEVRKVKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVKPNAGDTVAAIMTPKDKLV 160 (490)
T ss_dssp HHHHHHHHHCCC--------------------------------------------------------------------
T ss_pred HHHhhhhcccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhccccCCcHHHHhccCCCCE
Confidence 88775320 0 0
Q ss_pred -----------------------------------------cc---------------ceeeecccCh---hhHHHHHHc
Q psy3862 381 -----------------------------------------IK---------------HVADGGCTSP---GDVAKAMGA 401 (671)
Q Consensus 381 -----------------------------------------~~---------------~v~~~~~~~~---~~~~~l~~a 401 (671)
++ .+.++.++.+ +++++++++
T Consensus 161 tv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~a 240 (490)
T 4avf_A 161 TAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALVAA 240 (490)
T ss_dssp ----------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHT
T ss_pred EECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccCcchhhhccCcceeeeeeccccchHHHHHHHhhc
Confidence 00 0112223332 445667899
Q ss_pred CCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCc
Q psy3862 402 GADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGE 480 (671)
Q Consensus 402 G~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~ 480 (671)
|+|+|+|| ++|||+....++++.++..||.+ .+.+|++.+.+.++ +.++|||+|+||+ |+| +.|+||
T Consensus 241 G~d~I~id-~a~g~~~~~~~~v~~i~~~~p~~---------~Vi~g~v~t~e~a~~l~~aGaD~I~vg~-g~G-s~~~t~ 308 (490)
T 4avf_A 241 GVDVVVVD-TAHGHSKGVIERVRWVKQTFPDV---------QVIGGNIATAEAAKALAEAGADAVKVGI-GPG-SICTTR 308 (490)
T ss_dssp TCSEEEEE-CSCCSBHHHHHHHHHHHHHCTTS---------EEEEEEECSHHHHHHHHHTTCSEEEECS-SCS-TTCHHH
T ss_pred ccceEEec-ccCCcchhHHHHHHHHHHHCCCc---------eEEEeeeCcHHHHHHHHHcCCCEEEECC-CCC-cCCCcc
Confidence 99999999 99999988888887777776654 34678889999988 5699999999996 999 999998
Q ss_pred EEEeCCeEEEEeeCcccHHHHHhhcccccccc---ccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCcc
Q psy3862 481 LIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYR---AAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGAS 548 (671)
Q Consensus 481 ~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~---~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~ 548 (671)
.+ .|+|.|+++++.+++.++.++. .++|+ |.+++|+.||++ ||+|++|++++|+|++
T Consensus 309 ~~--------~g~g~p~~~~l~~v~~~~~~~~iPVIa~GG---I~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~ 373 (490)
T 4avf_A 309 IV--------AGVGVPQISAIANVAAALEGTGVPLIADGG---IRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGE 373 (490)
T ss_dssp HH--------TCBCCCHHHHHHHHHHHHTTTTCCEEEESC---CCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSC
T ss_pred cc--------CCCCccHHHHHHHHHHHhccCCCcEEEeCC---CCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCc
Confidence 64 4789999999999876554331 33332 789999999999 8999999999998887
No 25
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.97 E-value=2e-31 Score=299.60 Aligned_cols=215 Identities=23% Similarity=0.308 Sum_probs=174.0
Q ss_pred eccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHH
Q psy3862 290 INDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEE 369 (671)
Q Consensus 290 ~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~ 369 (671)
....+||||||||+|++|++.| ++|||+++|+ +++.+++|+|||+|||||+.+||++|++.||+|+||+++++++
T Consensus 30 ~~~~~~t~~d~~~~p~~~~~~~-~~~~~~t~lt----~~i~l~iPivsa~MdtvTe~~lAia~a~~GgiGvIh~~~~~~~ 104 (511)
T 3usb_A 30 FVKEGLTFDDVLLVPAKSDVLP-REVSVKTVLS----ESLQLNIPLISAGMDTVTEADMAIAMARQGGLGIIHKNMSIEQ 104 (511)
T ss_dssp TTCCCCCGGGEEECCCCCCCCT-TTSBCCEEEE----TTEEESSSEEECSCTTTCSHHHHHHHHHHTCEEEECSSSCHHH
T ss_pred hccCCcceEEEEEECCcccccc-cceEeeeEee----cccccCCCccccCchhhcHHHHHHHHHhcCCceeecccCCHHH
Confidence 3568999999999999999998 7999999998 6899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCc-----------------------------------------------------------------------
Q psy3862 370 WKAFAVQNP----------------------------------------------------------------------- 378 (671)
Q Consensus 370 ~~~~v~~~~----------------------------------------------------------------------- 378 (671)
|.++++++.
T Consensus 105 q~~~V~~V~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~~~~~~~V~~vM~~~ 184 (511)
T 3usb_A 105 QAEQVDKVKRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQDYSIKISDVMTKE 184 (511)
T ss_dssp HHHHHHHHHTSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTCCCSSSBHHHHCCCC
T ss_pred HHHHHHHhhccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhhccCCCcHHHhcccC
Confidence 987765420
Q ss_pred cc-----------------------cc----------------------------------ceeeecccCh---hhHHHH
Q psy3862 379 DV-----------------------IK----------------------------------HVADGGCTSP---GDVAKA 398 (671)
Q Consensus 379 ~~-----------------------~~----------------------------------~v~~~~~~~~---~~~~~l 398 (671)
++ ++ .+.+..++.+ +++..+
T Consensus 185 ~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aL 264 (511)
T 3usb_A 185 QLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDAL 264 (511)
T ss_dssp CCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHH
Confidence 00 00 0011112222 445667
Q ss_pred HHcCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEECccccCCccC
Q psy3862 399 MGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQS 477 (671)
Q Consensus 399 ~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~c 477 (671)
+++|+|+|+|| ++|+|+...+++++.++..||.+ .+++|++.+.+.++ +.++|||+|+||+ |+| ++|
T Consensus 265 veaGvd~I~Id-~a~g~~~~v~~~i~~i~~~~~~~---------~vi~g~v~t~e~a~~~~~aGad~i~vg~-g~g-si~ 332 (511)
T 3usb_A 265 VKASVDAIVLD-TAHGHSQGVIDKVKEVRAKYPSL---------NIIAGNVATAEATKALIEAGANVVKVGI-GPG-SIC 332 (511)
T ss_dssp HHTTCSEEEEE-CSCTTSHHHHHHHHHHHHHCTTS---------EEEEEEECSHHHHHHHHHHTCSEEEECS-SCS-TTC
T ss_pred HhhccceEEec-ccccchhhhhhHHHHHHHhCCCc---------eEEeeeeccHHHHHHHHHhCCCEEEECC-CCc-ccc
Confidence 89999999999 89999999999888887777654 24677789999988 5799999999996 999 999
Q ss_pred CCcEEEeCCeEEEEeeCcccHHHHHhhcccccccc---ccCCceEeeecCCCHHHHHH
Q psy3862 478 GGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYR---AAEGKTVQVPYRGDVNDTVQ 532 (671)
Q Consensus 478 tt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~---~~~G~~v~i~~~Gdi~kAia 532 (671)
+|+.+ .|+|.|+++++.+++..+.++. .++|+ |.+++|++||++
T Consensus 333 ~~~~~--------~g~g~p~~~~l~~v~~~~~~~~iPVIa~GG---I~~~~di~kala 379 (511)
T 3usb_A 333 TTRVV--------AGVGVPQLTAVYDCATEARKHGIPVIADGG---IKYSGDMVKALA 379 (511)
T ss_dssp CHHHH--------HCCCCCHHHHHHHHHHHHHTTTCCEEEESC---CCSHHHHHHHHH
T ss_pred ccccc--------cCCCCCcHHHHHHHHHHHHhCCCcEEEeCC---CCCHHHHHHHHH
Confidence 99864 4789999999988766555431 34443 789999999998
No 26
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.97 E-value=5e-31 Score=283.48 Aligned_cols=239 Identities=39% Similarity=0.581 Sum_probs=185.8
Q ss_pred ceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCC
Q psy3862 287 QKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYT 366 (671)
Q Consensus 287 ~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~ 366 (671)
-||+.+..++||||+|+|+++++.+|++|||+++|.|++++.+.++.|||.|||+++++.+||+++++.||+|+||.+++
T Consensus 12 ~~~~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~~~~s 91 (351)
T 2c6q_A 12 SGLVPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYS 91 (351)
T ss_dssp -------CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTTTSCHHHHHHHHHTTCEEECCTTCC
T ss_pred ccccccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCCCCcHHHHHHHHHCCCEEEEcCCCC
Confidence 47888999999999999999888888999999999988888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcccccceeeecccChhh---HHHHHHc--CCcEEEEccccccccccccccccccccccccccccccccC
Q psy3862 367 LEEWKAFAVQNPDVIKHVADGGCTSPGD---VAKAMGA--GADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLG 441 (671)
Q Consensus 367 ~e~~~~~v~~~~~~~~~v~~~~~~~~~~---~~~l~~a--G~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (671)
+|+|.+++++.|+.+..+....+.++++ ++.++++ |+|++.++ .++|++....+.++.++..+|.+
T Consensus 92 ~e~~~~~i~~~p~~l~~v~~~~g~~~~~~~~~~~l~~~~~g~~~i~i~-~~~g~~~~~~~~i~~lr~~~~~~-------- 162 (351)
T 2c6q_A 92 LVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLD-VANGYSEHFVEFVKDVRKRFPQH-------- 162 (351)
T ss_dssp HHHHHHHHHHCGGGCTTEEEEECSSHHHHHHHHHHHHHCTTCCEEEEE-CSCTTBHHHHHHHHHHHHHCTTS--------
T ss_pred HHHHHHHHhhCchhhheeEeecCCChHHHHHHHHHHhccCCCCEEEEE-ecCCCcHHHHHHHHHHHHhcCCC--------
Confidence 9999999987777665555554555433 4445676 99999998 67787665555555444444322
Q ss_pred ceeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEeeCcccHHHHHhhccccccc---cccCCc
Q psy3862 442 GVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEY---RAAEGK 517 (671)
Q Consensus 442 ~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y---~~~~G~ 517 (671)
.++ .|++.+.+.++ +.++|||+|.|+. |+| ++|++|.. .|+|.|+++++.++...+.++ ..++|+
T Consensus 163 ~vi-~g~v~t~e~A~~a~~aGaD~I~v~~-g~G-~~~~~r~~--------~g~~~p~~~~l~~v~~~~~~~~ipvIa~GG 231 (351)
T 2c6q_A 163 TIM-AGNVVTGEMVEELILSGADIIKVGI-GPG-SVCTTRKK--------TGVGYPQLSAVMECADAAHGLKGHIISDGG 231 (351)
T ss_dssp EEE-EEEECSHHHHHHHHHTTCSEEEECS-SCS-TTBCHHHH--------HCBCCCHHHHHHHHHHHHHHTTCEEEEESC
T ss_pred eEE-EEeCCCHHHHHHHHHhCCCEEEECC-CCC-cCcCcccc--------CCCCccHHHHHHHHHHHHhhcCCcEEEeCC
Confidence 133 34567777777 6799999999995 888 78988753 367899999988776544332 123332
Q ss_pred eEeeecCCCHHHHHH-----HHHhhHhHhccccCcc
Q psy3862 518 TVQVPYRGDVNDTVQ-----DILGGLRSACTYVGAS 548 (671)
Q Consensus 518 ~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~ 548 (671)
|+++.|++|||+ ||+|++|.+++|+|++
T Consensus 232 ---I~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~ 264 (351)
T 2c6q_A 232 ---CSCPGDVAKAFGAGADFVMLGGMLAGHSESGGE 264 (351)
T ss_dssp ---CCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSC
T ss_pred ---CCCHHHHHHHHHcCCCceeccHHHhcCccCcch
Confidence 799999999999 9999999999988776
No 27
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.95 E-value=5.5e-29 Score=278.31 Aligned_cols=258 Identities=23% Similarity=0.301 Sum_probs=194.3
Q ss_pred ccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHH
Q psy3862 291 NDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEW 370 (671)
Q Consensus 291 ~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~ 370 (671)
...+||||||||+|+||++.| ++||++++|+ +.+.+.+|||+|+||++++.+||+++++.||+|+||+++++|++
T Consensus 11 ~~~~~~~dd~~~~p~~~~~~~-~~v~l~t~lt----~~l~l~~PIi~a~m~~vt~~ela~ava~~GglG~i~~~~~~e~~ 85 (486)
T 2cu0_A 11 AIKGYTFDDVLLIPQATEVEP-KDVDVSTRIT----PNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMGIEEQ 85 (486)
T ss_dssp CCCCCCGGGEEECCCCCSSCS-TTCBCCEEEE----TTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSCHHHH
T ss_pred CCCCcCccCEEEcCCcCCCCc-ceEEEEeeec----CCcccccceEEccceeecHHHHHHHHHhcCCceeecCCCCHHHH
Confidence 347899999999999999998 6999999998 67899999999999999999999999999999999999999987
Q ss_pred HHHHhcCc---cc----------------------------c-------------------------------c------
Q psy3862 371 KAFAVQNP---DV----------------------------I-------------------------------K------ 382 (671)
Q Consensus 371 ~~~v~~~~---~~----------------------------~-------------------------------~------ 382 (671)
.+++.++. +. + +
T Consensus 86 ~~~I~~v~~~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~~~~~~~v~~im~~~~~~v~~ 165 (486)
T 2cu0_A 86 VEQVKRVKRAERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAAREGKLVKELMTKEVITVPE 165 (486)
T ss_dssp HHHHHHHHTCC---------------------------------------------------------------------
T ss_pred HHHHHhhcchhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhccCCCCCHHHHccCCCeEECC
Confidence 77654321 00 0 0
Q ss_pred -----------------c--eee---------------------------------ecccCh---hhHHHHHHcCCcEEE
Q psy3862 383 -----------------H--VAD---------------------------------GGCTSP---GDVAKAMGAGADFVM 407 (671)
Q Consensus 383 -----------------~--v~~---------------------------------~~~~~~---~~~~~l~~aG~d~i~ 407 (671)
. |.+ .+.++. +++..++++|+|.++
T Consensus 166 ~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~~~~~~~~~~g~~~v~~~~~~~~~~~a~~l~~~gvd~lv 245 (486)
T 2cu0_A 166 SIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKYKNAVRDENGELLVAAAVSPFDIKRAIELDKAGVDVIV 245 (486)
T ss_dssp -----------------------------------------CCTTCCBCTTSCBCCEEEECTTCHHHHHHHHHTTCSEEE
T ss_pred cCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhhccccccccCCceeecceechhhHHHHHHHHHhcCCceE
Confidence 0 000 000111 233444789999999
Q ss_pred EccccccccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccCCccCCCcEEEeCCe
Q psy3862 408 LGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELIEKDGK 487 (671)
Q Consensus 408 id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~ 487 (671)
+| +++||....++.++.++..+ .--+++|++.+.+.++.+. |||.|.||+ |+| ++|++|.+
T Consensus 246 vd-ta~G~~~~~L~~I~~l~~~~----------~vpvi~k~v~~~~~a~~l~-G~d~v~vg~-g~g-~~~~~r~~----- 306 (486)
T 2cu0_A 246 VD-TAHAHNLKAIKSMKEMRQKV----------DADFIVGNIANPKAVDDLT-FADAVKVGI-GPG-SICTTRIV----- 306 (486)
T ss_dssp EE-CSCCCCHHHHHHHHHHHHTC----------CSEEEEEEECCHHHHTTCT-TSSEEEECS-SCS-TTBCHHHH-----
T ss_pred EE-ecCCcEeehhhHHHHHHHHh----------CCccccCCcCCHHHHHHhh-CCCeEEEee-eec-cceeeeEE-----
Confidence 99 69999887777655444432 2224577788888888555 999999996 999 89999875
Q ss_pred EEEEeeCcccHHHHHhhcccccccc---ccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCcccccccCCcceE
Q psy3862 488 KVKLFYGMSSTTAMDKHAGGVAEYR---AAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGASKLKELPRRATF 559 (671)
Q Consensus 488 ~~k~g~G~~q~tAi~~~a~~~~~y~---~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~~i~e~~~~a~f 559 (671)
.|+|.||++++.+++..+.++. .++| .|++++|++|||+ ||+|++|++++|+|++. +
T Consensus 307 ---~~~g~~~~~~l~~~~~~~~~~~vpVia~G---Gi~~~~di~kalalGA~~v~~g~~~~~~~e~~~~~---------~ 371 (486)
T 2cu0_A 307 ---AGVGVPQITAVAMVADRAQEYGLYVIADG---GIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKE---------V 371 (486)
T ss_dssp ---TCCCCCHHHHHHHHHHHHHHHTCEEEEES---CCCSHHHHHHHHHTTCSEEEESTTTTTBTTCCSCE---------E
T ss_pred ---eecCcchHHHHHHHHHHHHHcCCcEEecC---CCCCHHHHHHHHHcCCCceeeChhhhcCccCchhh---------e
Confidence 4789999999998876655431 2444 2799999999999 99999999999999883 1
Q ss_pred EEecccccccccchhhhcccccccceeeccccccccccccccchhc
Q psy3862 560 IRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCT 605 (671)
Q Consensus 560 v~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~ 605 (671)
+.+| +++|.||||+|..||.+. +.+||+
T Consensus 372 ----------------~~~g-~~~k~~~g~~~~~a~~~~-~~~r~~ 399 (486)
T 2cu0_A 372 ----------------IING-RKYKQYRGMGSLGAMMKG-GAERYY 399 (486)
T ss_dssp ----------------EETT-EEEEEEECTTSHHHHTC--------
T ss_pred ----------------eeCC-cEEEEeecCCCHHHHhcc-cccccc
Confidence 2346 578999999999888643 566775
No 28
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.92 E-value=6.9e-26 Score=254.80 Aligned_cols=229 Identities=23% Similarity=0.223 Sum_probs=175.9
Q ss_pred cccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHH
Q psy3862 292 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 371 (671)
Q Consensus 292 ~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~ 371 (671)
..+|+||||||.|.+|++.| .+|+|.++|+ +.+.+.+|+|+++||++++.+||.+|+++||+++||++.++|++.
T Consensus 27 ~ralt~ddvlLmp~~s~~~p-~~v~l~~eLt----~~~~~~iP~vsa~md~~t~~~la~~ia~~gg~gii~~~~t~e~~~ 101 (514)
T 1jcn_A 27 ADDLTYNDFLILPGFIDFIA-DEVDLTSALT----RKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIHHNCTPEFQA 101 (514)
T ss_dssp SSCCCGGGEEECCCCCCSCG-GGCBCCEESS----SSCEESSCEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHHHHH
T ss_pred CcccccCcEEeccCccCCCc-ceeEEEeecc----CCeeEeceEEEEehhhhhhhhHHHHHHhcCCeeEEecCCCHHHHH
Confidence 47999999999999999999 8999999997 678899999999999999999999999999999999999999998
Q ss_pred HHHhcC---ccc-------------------------------c-----------------------------------c
Q psy3862 372 AFAVQN---PDV-------------------------------I-----------------------------------K 382 (671)
Q Consensus 372 ~~v~~~---~~~-------------------------------~-----------------------------------~ 382 (671)
++++++ .+. + +
T Consensus 102 ~~v~~v~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~ 181 (514)
T 1jcn_A 102 NEVRKVKNFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTP 181 (514)
T ss_dssp HHHHHHHTCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC----------------C
T ss_pred HHHHhhhhhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCC
Confidence 876321 000 0 0
Q ss_pred --------------------------c--ee-----------------------------------eecccCh---hhHH
Q psy3862 383 --------------------------H--VA-----------------------------------DGGCTSP---GDVA 396 (671)
Q Consensus 383 --------------------------~--v~-----------------------------------~~~~~~~---~~~~ 396 (671)
. |. +..+..+ ++++
T Consensus 182 ~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~~~~~~~~~rl~vga~vG~~~~~~~~a~ 261 (514)
T 1jcn_A 182 RIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLD 261 (514)
T ss_dssp CBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCCCTTCCBCTTSCBCCEEEECSSTTHHHHHH
T ss_pred CCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhhCcchhcccCCceeeeeEecCchhhHHHHH
Confidence 0 00 0000011 3345
Q ss_pred HHHHcCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEECccccCCc
Q psy3862 397 KAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHD 475 (671)
Q Consensus 397 ~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s 475 (671)
.++++|+|++.|+ ++|||.....+.++.++..+|.+ .|.+|++.+.+.++ +.++|||+|+||+ |+| +
T Consensus 262 ~~~~aG~d~v~i~-~~~G~~~~~~~~i~~i~~~~~~~---------pvi~~~v~t~~~a~~l~~aGad~I~vg~-~~G-~ 329 (514)
T 1jcn_A 262 LLTQAGVDVIVLD-SSQGNSVYQIAMVHYIKQKYPHL---------QVIGGNVVTAAQAKNLIDAGVDGLRVGM-GCG-S 329 (514)
T ss_dssp HHHHTTCSEEEEC-CSCCCSHHHHHHHHHHHHHCTTC---------EEEEEEECSHHHHHHHHHHTCSEEEECS-SCS-C
T ss_pred HHHHcCCCEEEee-ccCCcchhHHHHHHHHHHhCCCC---------ceEecccchHHHHHHHHHcCCCEEEECC-CCC-c
Confidence 5688999999999 88999766666666555554433 24456678888888 5699999999995 888 7
Q ss_pred cCCCcEEEeCCeEEEEeeCcccHHHHHhhcccccccc---ccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCc
Q psy3862 476 QSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYR---AAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGA 547 (671)
Q Consensus 476 ~ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~---~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g 547 (671)
.|+|+.. .++|.|+.+++..+...+..+. .++|+ |+++.|+.||++ ||+|+.|.++.|+|+
T Consensus 330 ~~~t~~~--------~~~g~~~~~~~~~~~~~~~~~~ipVia~GG---I~~~~di~kala~GAd~V~iG~~~l~~~e~~~ 398 (514)
T 1jcn_A 330 ICITQEV--------MACGRPQGTAVYKVAEYARRFGVPIIADGG---IQTVGHVVKALALGASTVMMGSLLAATTEAPG 398 (514)
T ss_dssp CBTTBCC--------CSCCCCHHHHHHHHHHHHGGGTCCEEEESC---CCSHHHHHHHHHTTCSEEEESTTTTTSTTSSC
T ss_pred ccccccc--------cCCCccchhHHHHHHHHHhhCCCCEEEECC---CCCHHHHHHHHHcCCCeeeECHHHHcCCcCCc
Confidence 8999763 4689999988877655544331 23332 789999999999 899999999998777
Q ss_pred c
Q psy3862 548 S 548 (671)
Q Consensus 548 ~ 548 (671)
+
T Consensus 399 ~ 399 (514)
T 1jcn_A 399 E 399 (514)
T ss_dssp C
T ss_pred c
Confidence 6
No 29
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.90 E-value=1.3e-23 Score=228.87 Aligned_cols=283 Identities=22% Similarity=0.298 Sum_probs=195.8
Q ss_pred ccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccC------
Q psy3862 291 NDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKY------ 364 (671)
Q Consensus 291 ~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~------ 364 (671)
.+..++||||+|+|+++.+.+ ++|||+++|- .+.+..||+.|||+++++++||+++++.|+++++|.+
T Consensus 32 ~~~~~~fd~v~l~p~~~~~~~-~~vdlst~l~-----g~~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~ 105 (393)
T 2qr6_A 32 ARRTYSLDDISVVSSRRTRSS-KDVDTTWHID-----AYKFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLWGRH 105 (393)
T ss_dssp EECCCCGGGEEECCCSCCCCG-GGCBCCEEET-----TEEESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTC
T ss_pred cccCCChhhEEEccCCCCCCh-hHCCceeEEc-----ccccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecceeccc
Confidence 357889999999998777765 9999999983 5789999999999999999999999999999999973
Q ss_pred CCHHHHHHHHhcC-------------------c---cc----ccceee--------ecccChhhH-HHHHHcCCcEEEEc
Q psy3862 365 YTLEEWKAFAVQN-------------------P---DV----IKHVAD--------GGCTSPGDV-AKAMGAGADFVMLG 409 (671)
Q Consensus 365 ~~~e~~~~~v~~~-------------------~---~~----~~~v~~--------~~~~~~~~~-~~l~~aG~d~i~id 409 (671)
..++...+++.+. + +. ++.+.. .+.....+. ..+.++|+|+++++
T Consensus 106 ~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~ 185 (393)
T 2qr6_A 106 ADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQ 185 (393)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEE
T ss_pred CCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEe
Confidence 3444433332211 1 10 111111 111122333 44468999999998
Q ss_pred ccc--ccccccccccccccccccccccccccccCc-eeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCcEEEeC
Q psy3862 410 GMF--AGHDQSGGELTNIEYMFFPLVGDMNSYLGG-VVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGELIEKD 485 (671)
Q Consensus 410 ~~a--~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~v~~~ 485 (671)
+.. .+|......+ ..+.++++.++- ++.|| +.+.+.++ ++++|||+|+||. |+ |+++.+
T Consensus 186 ~~~~~~~~~~~~~~~--------~~i~~l~~~~~~pvi~gg-i~t~e~a~~~~~~Gad~i~vg~-Gg----~~~~~~--- 248 (393)
T 2qr6_A 186 GTLISAEHVNTGGEA--------LNLKEFIGSLDVPVIAGG-VNDYTTALHMMRTGAVGIIVGG-GE----NTNSLA--- 248 (393)
T ss_dssp CSSCCSSCCCC-------------CHHHHHHHCSSCEEEEC-CCSHHHHHHHHTTTCSEEEESC-CS----CCHHHH---
T ss_pred CCccccccCCCcccH--------HHHHHHHHhcCCCEEECC-cCCHHHHHHHHHcCCCEEEECC-Cc----cccccc---
Confidence 543 2332211111 123344444432 55555 56777777 6799999999985 42 555542
Q ss_pred CeEEEEeeCcccHHHHHhhccccccc----------cccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCcccc
Q psy3862 486 GKKVKLFYGMSSTTAMDKHAGGVAEY----------RAAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGASKL 550 (671)
Q Consensus 486 g~~~k~g~G~~q~tAi~~~a~~~~~y----------~~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~~i 550 (671)
.++|.|+.+++.++...+.+| ..++|+ |+++.|+.|||+ ||+|+.+.++.|||++.
T Consensus 249 -----~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GG---I~~~~dv~kalalGA~~V~iG~~~l~~~es~~~~- 319 (393)
T 2qr6_A 249 -----LGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGS---IENSGDVVKAIACGADAVVLGSPLARAEEAAGKG- 319 (393)
T ss_dssp -----TSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSS---CCSHHHHHHHHHHTCSEEEECGGGGGSTTCTTTT-
T ss_pred -----CCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECC---CCCHHHHHHHHHcCCCEEEECHHHHcCCCCCCce-
Confidence 357889999997765542111 123332 788999999999 89999999999887762
Q ss_pred cccCCcceEEEecccccccccchhhhcccccccceeeccccccccccccccchhccccccccCCCceEeccc----ccCH
Q psy3862 551 KELPRRATFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPY----RGDV 626 (671)
Q Consensus 551 ~e~~~~a~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~----kG~v 626 (671)
.+|||++. ....|+|++.++++ ++.+
T Consensus 320 ----------------------------------~~~g~~~~----------------~~~~~~Gv~~~~~~~~~~~~~~ 349 (393)
T 2qr6_A 320 ----------------------------------YFWPAVAA----------------HPRFPRGVVTESVDLDEAAPSL 349 (393)
T ss_dssp ----------------------------------EECCGGGG----------------CSSSCCCCCEECC----CCCCH
T ss_pred ----------------------------------EEEecccC----------------cccCCCccccccccccccchhH
Confidence 46788775 22468898888765 7788
Q ss_pred HHHH----------HHHHHHHhhhccccCcccccccccc
Q psy3862 627 NDTV----------QDILGGLRSACTYVGASKLKELPRR 655 (671)
Q Consensus 627 ~~~l----------~~l~gGLrs~m~y~Ga~~l~el~~~ 655 (671)
.+++ .+|.++||++|+|+|+++++||++.
T Consensus 350 ~~~~~g~~~~~~~~~~l~~el~~~m~~~G~~~i~el~~~ 388 (393)
T 2qr6_A 350 EQILHGPSTMPWGVENFEGGLKRALAKCGYTDLKSFQKV 388 (393)
T ss_dssp HHHHHCCCSCTTSSSCHHHHHHHHHHHHTCSBHHHHTTC
T ss_pred HHHhccchhHHHHHHHHHHHHHHHHHHhCCCCHHHHhhc
Confidence 8877 4899999999999999999999864
No 30
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.89 E-value=1.2e-23 Score=234.99 Aligned_cols=246 Identities=25% Similarity=0.320 Sum_probs=189.5
Q ss_pred ccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHH
Q psy3862 293 IKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKA 372 (671)
Q Consensus 293 ~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~ 372 (671)
.+||||||||+|++|++.| ++||++++|+ +.+.+.+|||+++||++++.+||.++++.||+|+||+++++|++.+
T Consensus 10 ~~~~~~d~~~~p~~~~~~p-~~v~~~t~lt----~~l~~~~Piv~a~M~~vt~~eLa~av~~~Gg~G~i~~~~~~e~~~~ 84 (491)
T 1zfj_A 10 KGYTFDDVLLIPAESHVLP-NEVDLKTKLA----DNLTLNIPIITAAMDTVTGSKMAIAIARAGGLGVIHKNMSITEQAE 84 (491)
T ss_dssp CCCCGGGEEECCCCCCSCG-GGCCCCEEEE----TTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHHHHHH
T ss_pred cCCChhhEEeccCcCCcCc-cccccchhhh----hcceecCceEecCchhccHHHHHHHHHHcCCceEEeCCCCHHHHHH
Confidence 7999999999999999999 7999999998 5788999999999999999999999999999999999999998877
Q ss_pred HHhcCcc--------c--------------------------cc------------------------------------
Q psy3862 373 FAVQNPD--------V--------------------------IK------------------------------------ 382 (671)
Q Consensus 373 ~v~~~~~--------~--------------------------~~------------------------------------ 382 (671)
++.++.+ . +.
T Consensus 85 ~i~~v~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~ 164 (491)
T 1zfj_A 85 EVRKVKRSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISDYNAPISEHMTSEHLV 164 (491)
T ss_dssp HHHHHHHHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCSCSSSBTTTSCCCSCCC
T ss_pred HHHHHhhHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhccCCCcHHHHcCCCCCE
Confidence 7654200 0 00
Q ss_pred ---------------------c--eee---------------------------------ecccC-----hhhHHHHHHc
Q psy3862 383 ---------------------H--VAD---------------------------------GGCTS-----PGDVAKAMGA 401 (671)
Q Consensus 383 ---------------------~--v~~---------------------------------~~~~~-----~~~~~~l~~a 401 (671)
. |.+ .+.++ .++...++++
T Consensus 165 ~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~l~~~ 244 (491)
T 1zfj_A 165 TAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEA 244 (491)
T ss_dssp CEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHHHHHc
Confidence 0 000 00011 1344556789
Q ss_pred CCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCc
Q psy3862 402 GADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGE 480 (671)
Q Consensus 402 G~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~ 480 (671)
|+|.|+++ +++||....++.++.++..+|.+. + .+|++.+.+.++ ++++|||+|.||+ |+| +.|+|+
T Consensus 245 G~d~ivi~-~a~g~~~~~~~~i~~l~~~~p~~p--------v-i~G~v~t~~~a~~~~~~Gad~I~vg~-g~g-~~~~tr 312 (491)
T 1zfj_A 245 GADAIVID-TAHGHSAGVLRKIAEIRAHFPNRT--------L-IAGNIATAEGARALYDAGVDVVKVGI-GPG-SICTTR 312 (491)
T ss_dssp TCSEEEEC-CSCTTCHHHHHHHHHHHHHCSSSC--------E-EEEEECSHHHHHHHHHTTCSEEEECS-SCC-TTBCHH
T ss_pred CCCeEEEe-eecCcchhHHHHHHHHHHHCCCCc--------E-eCCCccCHHHHHHHHHcCCCEEEECc-cCC-cceEEe
Confidence 99999999 588998766666655555554332 4 477788888887 6799999999996 999 899998
Q ss_pred EEEeCCeEEEEeeCcccHHHHHhhccccccc---cccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCcccccc
Q psy3862 481 LIEKDGKKVKLFYGMSSTTAMDKHAGGVAEY---RAAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGASKLKE 552 (671)
Q Consensus 481 ~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y---~~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~~i~e 552 (671)
.. .++|.|+..++.+++..+.+. ..++|+ |+++.|+.||++ ||+|+++.+++|++++.+
T Consensus 313 ~~--------~~~~~p~~~~l~~~~~~~~~~~ipvia~GG---i~~~~di~kal~~GA~~v~vG~~~~~~~e~~~~~~-- 379 (491)
T 1zfj_A 313 VV--------AGVGVPQVTAIYDAAAVAREYGKTIIADGG---IKYSGDIVKALAAGGNAVMLGSMFAGTDEAPGETE-- 379 (491)
T ss_dssp HH--------TCCCCCHHHHHHHHHHHHHHTTCEEEEESC---CCSHHHHHHHHHTTCSEEEESTTTTTBSSCCCCEE--
T ss_pred ee--------cCCCCCcHHHHHHHHHHHhhcCCCEEeeCC---CCCHHHHHHHHHcCCcceeeCHHhhCCCcCcceEE--
Confidence 64 357899999998876543221 133343 789999999999 899999999998888731
Q ss_pred cCCcceEEEecccccccccchhhhcccccccceeeccccc
Q psy3862 553 LPRRATFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKL 592 (671)
Q Consensus 553 ~~~~a~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~ 592 (671)
+.+| +.+|.||||+|.
T Consensus 380 -----------------------~~~g-~~~k~~~g~~~~ 395 (491)
T 1zfj_A 380 -----------------------IYQG-RKYKTYRGMGSI 395 (491)
T ss_dssp -----------------------EETT-EEEEEEECTTSH
T ss_pred -----------------------EECC-EEEEEEecccCH
Confidence 1235 578999999997
No 31
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.89 E-value=1.4e-23 Score=234.84 Aligned_cols=229 Identities=25% Similarity=0.327 Sum_probs=174.7
Q ss_pred cccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHH
Q psy3862 292 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 371 (671)
Q Consensus 292 ~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~ 371 (671)
..+||||||||+|.+|++.|+ +||++++|+ +.+.+.+|+|+++||++++.+||++|++.||+|+||++.++|++.
T Consensus 14 ~~~~~~~dvll~p~~s~~~p~-~v~~~~eLt----~~~~l~iP~is~~m~~v~~~~lA~al~~~GglG~i~~~~~~e~~~ 88 (494)
T 1vrd_A 14 KEALTFDDVLLVPQYSEVLPK-DVKIDTRLT----RQIRINIPLVSAAMDTVTEAALAKALAREGGIGIIHKNLTPDEQA 88 (494)
T ss_dssp CCCCCGGGEEECCCCCCCCGG-GSCCCEESS----SSCEESSSEEECCCTTTCSHHHHHHHHTTTCEEEECSSSCHHHHH
T ss_pred ccccccccEEeccccccCCCC-ceEEEehhh----CCCccCceeEecchHHHhHHHHHHHHHHcCCceEEecCCChHHHH
Confidence 568999999999999999996 999999998 578999999999999999999999999999999999999999987
Q ss_pred HHHhcC---ccc----------------------------cc---------------ce---------------------
Q psy3862 372 AFAVQN---PDV----------------------------IK---------------HV--------------------- 384 (671)
Q Consensus 372 ~~v~~~---~~~----------------------------~~---------------~v--------------------- 384 (671)
+++.++ .+. ++ .+
T Consensus 89 ~~v~~v~~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~ 168 (494)
T 1vrd_A 89 RQVSIVKKTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEKNLSKKIKDLMTPREKLI 168 (494)
T ss_dssp HHHHHHHTC-----------------------------------------------------------------------
T ss_pred HHHHhhhhHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhcCCCCcHHHHhCCCCCCe
Confidence 765332 110 00 00
Q ss_pred ----------------------------------------------------------eeecccC-----hhhHHHHHHc
Q psy3862 385 ----------------------------------------------------------ADGGCTS-----PGDVAKAMGA 401 (671)
Q Consensus 385 ----------------------------------------------------------~~~~~~~-----~~~~~~l~~a 401 (671)
...++++ .+++..++++
T Consensus 169 ~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~~~~~D~~~~l~vga~ig~~~~~~~~a~~l~~a 248 (494)
T 1vrd_A 169 VAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVKA 248 (494)
T ss_dssp ----------------------------------------CHHHHTCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHT
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccccccccchhhhccccccCcCHhHHHHHHHHHHh
Confidence 0000011 1344556899
Q ss_pred CCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCc
Q psy3862 402 GADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGE 480 (671)
Q Consensus 402 G~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~ 480 (671)
|+|+++++ +++||.....+.++.++..+|.+. ++. |++.+.+.++ +.++|||+|.||. ++| +.|+++
T Consensus 249 Gvd~v~i~-~~~G~~~~~~e~i~~i~~~~p~~p--------vi~-g~~~t~e~a~~l~~~G~d~I~v~~-~~G-~~~~~~ 316 (494)
T 1vrd_A 249 GVDVIVID-TAHGHSRRVIETLEMIKADYPDLP--------VVA-GNVATPEGTEALIKAGADAVKVGV-GPG-SICTTR 316 (494)
T ss_dssp TCSEEEEC-CSCCSSHHHHHHHHHHHHHCTTSC--------EEE-EEECSHHHHHHHHHTTCSEEEECS-SCS-TTCHHH
T ss_pred CCCEEEEE-ecCCchHHHHHHHHHHHHHCCCce--------EEe-CCcCCHHHHHHHHHcCCCEEEEcC-CCC-cccccc
Confidence 99999998 788987767777666666554331 333 5567777777 5699999999996 888 789887
Q ss_pred EEEeCCeEEEEeeCcccHHHHHhhccccccc---cccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCcc
Q psy3862 481 LIEKDGKKVKLFYGMSSTTAMDKHAGGVAEY---RAAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGAS 548 (671)
Q Consensus 481 ~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y---~~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~ 548 (671)
.. .++|.|+.+++.+++..+.++ ..++|+ |+++.|+.||++ ||+|+.|.++.|+|++
T Consensus 317 ~~--------~~~g~p~~~~l~~v~~~~~~~~ipvia~GG---I~~~~di~kala~GAd~V~iGr~~l~~~e~~~~ 381 (494)
T 1vrd_A 317 VV--------AGVGVPQLTAVMECSEVARKYDVPIIADGG---IRYSGDIVKALAAGAESVMVGSIFAGTEEAPGE 381 (494)
T ss_dssp HH--------HCCCCCHHHHHHHHHHHHHTTTCCEEEESC---CCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSE
T ss_pred cc--------CCCCccHHHHHHHHHHHHhhcCCCEEEECC---cCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcc
Confidence 53 357889998888766544332 134443 789999999999 8999999999988877
No 32
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.81 E-value=2.1e-20 Score=204.25 Aligned_cols=228 Identities=22% Similarity=0.286 Sum_probs=166.9
Q ss_pred ccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHH
Q psy3862 293 IKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKA 372 (671)
Q Consensus 293 ~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~ 372 (671)
.+++||||+|+|+++++.+ ++|||+++|. +.+.+..||+.|||+++++.+||.++++.||+++||+++++|++.+
T Consensus 8 ~~~~fd~v~l~p~~~~~~~-~~vdlst~l~----~g~~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~~~~s~e~~~~ 82 (404)
T 1eep_A 8 EALTFDDVSLIPRKSSVLP-SEVSLKTQLT----KNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQRK 82 (404)
T ss_dssp CCCCGGGEEECCCCCCSCG-GGCCCCEESS----SSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEECSSSCHHHHHH
T ss_pred cCCCcccEEEccCCCCcCc-cccccceecc----CCcccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHH
Confidence 7899999999999999887 8999999985 3578999999999999999999999999999999999999999888
Q ss_pred HHhcCccc----------------------------------------ccc----------eeeecccCh---hhHHHHH
Q psy3862 373 FAVQNPDV----------------------------------------IKH----------VADGGCTSP---GDVAKAM 399 (671)
Q Consensus 373 ~v~~~~~~----------------------------------------~~~----------v~~~~~~~~---~~~~~l~ 399 (671)
++.+.++. .+. +.+..+..+ +++..++
T Consensus 83 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~~~~~~~a~~~~ 162 (404)
T 1eep_A 83 EIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELV 162 (404)
T ss_dssp HHHHHHTCC--------------------------------------CCTTCCBCTTSCBCCEEEECSCTTHHHHHHHHH
T ss_pred HHHHHHhhccCCCceeccccccccccccccCCCCCHHHHHHHHHHhhhcchhhhhcccCceEEEEeCCChhHHHHHHHHH
Confidence 77532110 010 111112222 3345558
Q ss_pred HcCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEECccccCCccCC
Q psy3862 400 GAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSG 478 (671)
Q Consensus 400 ~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ct 478 (671)
++|+|++.|+ +++|+.....++++.++..+|.+ .++. +++.+.+.++ +.++|||+|.||. ++| +.|+
T Consensus 163 ~~G~d~i~i~-~~~g~~~~~~e~i~~ir~~~~~~--------pviv-~~v~~~~~a~~a~~~Gad~I~vg~-~~G-~~~~ 230 (404)
T 1eep_A 163 KAHVDILVID-SAHGHSTRIIELIKKIKTKYPNL--------DLIA-GNIVTKEAALDLISVGADCLKVGI-GPG-SICT 230 (404)
T ss_dssp HTTCSEEEEC-CSCCSSHHHHHHHHHHHHHCTTC--------EEEE-EEECSHHHHHHHHTTTCSEEEECS-SCS-TTSH
T ss_pred HCCCCEEEEe-CCCCChHHHHHHHHHHHHHCCCC--------eEEE-cCCCcHHHHHHHHhcCCCEEEECC-CCC-cCcC
Confidence 8999999997 67777544455544444433221 1333 4467777777 5799999999985 888 6888
Q ss_pred CcEEEeCCeEEEEeeCcccHHHHHhhccccccc---cccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCcc
Q psy3862 479 GELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEY---RAAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGAS 548 (671)
Q Consensus 479 t~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y---~~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~ 548 (671)
++.. -+.|.|+.+++.++...+... ..++|+ |.+..|+.|+++ ||+|+.+..+.|+++.
T Consensus 231 ~~~~--------~~~g~p~~~~l~~v~~~~~~~~ipVia~GG---I~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~~ 297 (404)
T 1eep_A 231 TRIV--------AGVGVPQITAICDVYEACNNTNICIIADGG---IRFSGDVVKAIAAGADSVMIGNLFAGTKESPSE 297 (404)
T ss_dssp HHHH--------HCCCCCHHHHHHHHHHHHTTSSCEEEEESC---CCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSC
T ss_pred cccc--------CCCCcchHHHHHHHHHHHhhcCceEEEECC---CCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCcc
Confidence 7642 246788888887765432211 122332 688899999999 8999999999988776
No 33
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.81 E-value=1.3e-18 Score=189.49 Aligned_cols=220 Identities=21% Similarity=0.215 Sum_probs=143.8
Q ss_pred ccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEeecCC------
Q psy3862 16 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYY------ 89 (671)
Q Consensus 16 ~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~------ 89 (671)
...++|||++|+|++..+ +.+++||+++| .+++++.||+.+||+++++.++|.++++.|++|+++.++
T Consensus 33 ~~~~~fd~v~l~p~~~~~-~~~~vdlst~l-----~g~~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~ 106 (393)
T 2qr6_A 33 RRTYSLDDISVVSSRRTR-SSKDVDTTWHI-----DAYKFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLWGRHA 106 (393)
T ss_dssp ECCCCGGGEEECCCSCCC-CGGGCBCCEEE-----TTEEESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTCS
T ss_pred ccCCChhhEEEccCCCCC-ChhHCCceeEE-----cccccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecceecccC
Confidence 467899999999985555 46899999999 488999999999999999999999999999999999865
Q ss_pred CHHHHHHhhhcCc-ccccceEEecCCChhhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHh-CCCceEEEEE
Q psy3862 90 TLEEWKAFAVQNP-DVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREM-YPKHVIIAGN 167 (671)
Q Consensus 90 ~~Eeq~~~i~~~p-~~~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~-~P~~~li~g~ 167 (671)
.++...+.+.+.. .+..++ + ...+..+.- .+ ...+...+.++++++. +|....+.+.
T Consensus 107 ~~~~~~eeia~~~~~~d~~~----g-----~~~~~q~~~-~~-----------~d~~~~~~~i~~~~~~g~~v~~~v~~~ 165 (393)
T 2qr6_A 107 DLDEAIAKVIAAYEEGDQAA----A-----TRTLQELHA-AP-----------LDTELLSERIAQVRDSGEIVAVRVSPQ 165 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHHH----H-----HHHHHHHHH-SC-----------CCHHHHHHHHHHHHHTTSCCEEEECTT
T ss_pred CchhHHHHHHHHHHhcCCCc----c-----chhhhhccc-cc-----------CCHHHHHHHHHHHhhcCCeEEEEeCCc
Confidence 2322222221110 000010 0 001111100 00 0123344555655543 3432222211
Q ss_pred eccHHHHHHHHHCCCcEEEECcCC---CceEEEEecccCCcchhhhhcc--ccC-CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 168 VVTGEMVEELILSGADVIKVGIGP---GSVCTTRLKNKTSDFFLIQFYS--CIP-QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 168 v~t~e~a~~Li~AGaD~IvVdga~---G~~~~t~v~~~~~~~~~i~~i~--~~p-~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.+.++.+.++|+|++.+++.. ++.. .......+....+ .+| ++||+.|.+.++.++++|||+|.||
T Consensus 166 -~~~e~a~~~~~agad~i~i~~~~~~~~~~~-----~~~~~~~i~~l~~~~~~pvi~ggi~t~e~a~~~~~~Gad~i~vg 239 (393)
T 2qr6_A 166 -NVREIAPIVIKAGADLLVIQGTLISAEHVN-----TGGEALNLKEFIGSLDVPVIAGGVNDYTTALHMMRTGAVGIIVG 239 (393)
T ss_dssp -THHHHHHHHHHTTCSEEEEECSSCCSSCCC-----C-----CHHHHHHHCSSCEEEECCCSHHHHHHHHTTTCSEEEES
T ss_pred -cHHHHHHHHHHCCCCEEEEeCCccccccCC-----CcccHHHHHHHHHhcCCCEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 24677888889999999987532 1210 0000001111111 356 5799999999999999999999997
Q ss_pred ccCCCccccceecccCcchhhhHHHHHHHh
Q psy3862 242 IGPGSVCTTRLKTGVGYPQFSAVLECADAA 271 (671)
Q Consensus 242 ~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~ 271 (671)
.|+ |++|.+.+.|.|+++++.++++++
T Consensus 240 ~Gg---~~~~~~~~~g~~~~~~l~~v~~~~ 266 (393)
T 2qr6_A 240 GGE---NTNSLALGMEVSMATAIADVAAAR 266 (393)
T ss_dssp CCS---CCHHHHTSCCCCHHHHHHHHHHHH
T ss_pred CCc---ccccccCCCCCChHHHHHHHHHHH
Confidence 654 999999999999999999999875
No 34
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.80 E-value=3.6e-20 Score=197.90 Aligned_cols=211 Identities=20% Similarity=0.274 Sum_probs=152.2
Q ss_pred cccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHH
Q psy3862 292 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWK 371 (671)
Q Consensus 292 ~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~ 371 (671)
+..++||||+|+|+++++.++++|||+++|. .+.+..||+.|+|.++++.+||.++++.||+++++.. +++.+.
T Consensus 11 ~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~-----g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~-~~~~~~ 84 (336)
T 1ypf_A 11 GNVFDYEDIQLIPAKCIVNSRSECDTTVTLG-----KHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRF-QPEKRI 84 (336)
T ss_dssp -CCCCGGGEEECCCCCCCSSGGGCBCCEEET-----TEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCS-SGGGHH
T ss_pred cccCCcceEEEecccCCCCCcccCcceEEEC-----CEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCC-CCHHHH
Confidence 5678999999999999999999999999996 5789999999999999999999999999999999976 456666
Q ss_pred HHHhcCcccccceeeecccChhhH---HHHHHcC--CcEEEEccccccccccccccccccccccccccccccccC-ceee
Q psy3862 372 AFAVQNPDVIKHVADGGCTSPGDV---AKAMGAG--ADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLG-GVVD 445 (671)
Q Consensus 372 ~~v~~~~~~~~~v~~~~~~~~~~~---~~l~~aG--~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~ 445 (671)
+++++.++.--.+.+.-+..++++ ..+.++| +|++.++ .++|+.....+.++ ++++.++ ..+.
T Consensus 85 ~~i~~~~~~g~~v~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~-~~~G~~~~~~~~i~----------~lr~~~~~~~vi 153 (336)
T 1ypf_A 85 SFIRDMQSRGLIASISVGVKEDEYEFVQQLAAEHLTPEYITID-IAHGHSNAVINMIQ----------HIKKHLPESFVI 153 (336)
T ss_dssp HHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTCCCSEEEEE-CSSCCSHHHHHHHH----------HHHHHCTTSEEE
T ss_pred HHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHhcCCCCCEEEEE-CCCCCcHHHHHHHH----------HHHHhCCCCEEE
Confidence 666553321001222223344443 3447889 9999998 66775444444443 4444443 2445
Q ss_pred ccccCchhHHH-HHHcCCcEEEECccccCCccCCCcEEEeCCeEEEEeeCcc--cHHHHHhhccccccccccCCceEeee
Q psy3862 446 GGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMS--STTAMDKHAGGVAEYRAAEGKTVQVP 522 (671)
Q Consensus 446 gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~~k~g~G~~--q~tAi~~~a~~~~~y~~~~G~~v~i~ 522 (671)
.|++.+.+.++ +.++|||+|.|+. .+| ..|+++.. .|.|.| +..++.+++.+.+--..++|+ |+
T Consensus 154 ~G~v~s~e~A~~a~~aGad~Ivvs~-hgG-~~~~~~~~--------~~~g~~g~~~~~l~~v~~~~~ipVIa~GG---I~ 220 (336)
T 1ypf_A 154 AGNVGTPEAVRELENAGADATKVGI-GPG-KVCITKIK--------TGFGTGGWQLAALRWCAKAASKPIIADGG---IR 220 (336)
T ss_dssp EEEECSHHHHHHHHHHTCSEEEECS-SCS-TTCHHHHH--------HSCSSTTCHHHHHHHHHHTCSSCEEEESC---CC
T ss_pred ECCcCCHHHHHHHHHcCCCEEEEec-CCC-ceeecccc--------cCcCCchhHHHHHHHHHHHcCCcEEEeCC---CC
Confidence 67778888888 6799999999986 666 67776542 356777 888888766543211234443 78
Q ss_pred cCCCHHHHHH
Q psy3862 523 YRGDVNDTVQ 532 (671)
Q Consensus 523 ~~Gdi~kAia 532 (671)
+..|+.||++
T Consensus 221 ~g~Dv~kala 230 (336)
T 1ypf_A 221 TNGDVAKSIR 230 (336)
T ss_dssp STHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999999997
No 35
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.59 E-value=7.8e-15 Score=158.47 Aligned_cols=167 Identities=19% Similarity=0.198 Sum_probs=112.2
Q ss_pred CCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccH------HHHHHHHHcCCeEEeecCC--
Q psy3862 18 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTF------EMAKHLAKHGLFTTIHKYY-- 89 (671)
Q Consensus 18 ~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~------~lA~Ala~~gglgvIh~n~-- 89 (671)
..+||||.|+|+.+|.++.++|||+++|. +.+|+.|+++++|++++.. .+|.+.++.|-...+..+.
T Consensus 26 ~~~~~~v~l~~~~lp~~~~~~vd~st~~~-----g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~ 100 (368)
T 3vkj_A 26 STFLNDVILVHQGFPGISFSEINTKTKFF-----RKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVA 100 (368)
T ss_dssp CCSGGGEEECCCSSCBSBGGGCBCCEEET-----TEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHH
T ss_pred CCCcceEEEEcCCCCccCcccccceeEEC-----CEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhc
Confidence 46799999999999999999999999994 8999999999999998753 3788666666333343331
Q ss_pred --CHHHHHHh--hh-cCcccccceEEec------C-CChhhHHHHHHHHHhCCCceEEEeeccC------CCC--h-HHH
Q psy3862 90 --TLEEWKAF--AV-QNPDVIKHVAVSS------G-ISAKDLAGLKEILAALPEIEYICLDVAN------GYT--Q-TFV 148 (671)
Q Consensus 90 --~~Eeq~~~--i~-~~p~~~~~~~v~~------G-~~~~d~~rl~~l~~a~~~~d~Ivld~a~------G~~--~-~~~ 148 (671)
.++.+..+ ++ .+|+. ++..++ + .+++...++.+++++ +...++++..+ |+. . .+.
T Consensus 101 l~~~~~~~s~~~vr~~ap~~--~~~anlg~~ql~~~~~~~~~~~av~~~~a--~al~Ihln~~~~~~~p~g~~~~~~~~~ 176 (368)
T 3vkj_A 101 IEKAEARESFAIVRKVAPTI--PIIANLGMPQLVKGYGLKEFQDAIQMIEA--DAIAVHLNPAQEVFQPEGEPEYQIYAL 176 (368)
T ss_dssp HHCGGGSHHHHHHHHHCSSS--CEEEEEEGGGGGTTCCHHHHHHHHHHTTC--SEEEEECCHHHHHHSSSCCCBCBTHHH
T ss_pred cCCHHHHhhHHHHHHhCcCc--ceecCcCeeecCCCCCHHHHHHHHHHhcC--CCeEEEecchhhhhCCCCCchhhHHHH
Confidence 12322233 23 24542 221111 2 344445555555544 55666665543 332 1 478
Q ss_pred HHHHHHHHhC--CCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCc
Q psy3862 149 DFVRRIREMY--PKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGS 193 (671)
Q Consensus 149 ~~ik~lr~~~--P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~ 193 (671)
+.++++++.. |...+.+|+..+.+.|+.|.++|||+|++++.+|+
T Consensus 177 ~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt 223 (368)
T 3vkj_A 177 EKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGT 223 (368)
T ss_dssp HHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSB
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCC
Confidence 8899887754 54444456667899999999999999999888775
No 36
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.56 E-value=7.3e-15 Score=158.35 Aligned_cols=217 Identities=12% Similarity=0.133 Sum_probs=132.7
Q ss_pred CCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCcccc------HHHHHHHHHcCCeEEeecCC-C
Q psy3862 18 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGT------FEMAKHLAKHGLFTTIHKYY-T 90 (671)
Q Consensus 18 ~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~------~~lA~Ala~~gglgvIh~n~-~ 90 (671)
..+|||+.|+|+.+|..+.++|||+++|. +.+++.||++++|++++. ..+|.+.++.|-.-.+..+. .
T Consensus 53 ~~~fd~i~l~~~~lP~~~~~~vd~st~i~-----g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~ 127 (365)
T 3sr7_A 53 YNSFDDIELIHHSLPDYDLAEIDLSTHFA-----GQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA 127 (365)
T ss_dssp CCGGGGEEECCCSSCCSCGGGCCCCEEET-----TEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------
T ss_pred CCCcceEEEECCCCCcCCcccccceEEEC-----CEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc
Confidence 47899999999999998899999999994 789999999999998764 35888766666433333221 1
Q ss_pred HHH--HHHh-hh-cCcccccceEEecCCChhhHHHHHHHHHhCCCceEEEeecc------CCC--ChHHHHHHHHHHHhC
Q psy3862 91 LEE--WKAF-AV-QNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVA------NGY--TQTFVDFVRRIREMY 158 (671)
Q Consensus 91 ~Ee--q~~~-i~-~~p~~~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a------~G~--~~~~~~~ik~lr~~~ 158 (671)
+|+ +..+ +. ..|+...-..++.+.+.++..++.+.+++ +...+.++.. .|+ ...|.+.++++++..
T Consensus 128 le~~~~~~~~v~r~~P~~~~ianig~~~~~e~~~~~ve~~~a--dal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~ 205 (365)
T 3sr7_A 128 LKNPDDTSYQVKKSRPHLLLATNIGLDKPYQAGLQAVRDLQP--LFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL 205 (365)
T ss_dssp -----------------CCEEEEEETTSCHHHHHHHHHHHCC--SCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC
T ss_pred ccCccccceEehhhCCCCcEEEEeCCCCCHHHHHHHHHhcCC--CEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh
Confidence 221 1222 22 23432211122333444444455455544 5555666654 233 357889999998765
Q ss_pred --CCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEE--EEec-------cc--CCcchhhhhcc----ccC--Ccc
Q psy3862 159 --PKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCT--TRLK-------NK--TSDFFLIQFYS----CIP--QAG 219 (671)
Q Consensus 159 --P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~--t~v~-------~~--~~~~~~i~~i~----~~p--~aG 219 (671)
|...+.+|...+.+.|+.|.++|||+|++++.+|+... ...+ .. .|+...+..+. .+| +.|
T Consensus 206 ~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~G 285 (365)
T 3sr7_A 206 QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASG 285 (365)
T ss_dssp CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeC
Confidence 44444333337899999999999999999998887531 1111 01 23333333332 345 799
Q ss_pred ccccHHHHHHHHHcCCCEEEEc
Q psy3862 220 NVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 220 nV~t~~~a~~li~aGAdgvkVG 241 (671)
||-|+..+..++++|||+|.+|
T Consensus 286 GI~~g~Dv~KaLalGAdaV~ig 307 (365)
T 3sr7_A 286 GIRHPLDIIKALVLGAKAVGLS 307 (365)
T ss_dssp SCCSHHHHHHHHHHTCSEEEES
T ss_pred CCCCHHHHHHHHHcCCCEEEEC
Confidence 9999999999999999999998
No 37
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.41 E-value=2.8e-12 Score=136.30 Aligned_cols=202 Identities=17% Similarity=0.210 Sum_probs=139.1
Q ss_pred cceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEee-cCCCHHHHHHhhhcCcc-cccceEEecCC-
Q psy3862 38 EVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIH-KYYTLEEWKAFAVQNPD-VIKHVAVSSGI- 114 (671)
Q Consensus 38 ~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh-~n~~~Eeq~~~i~~~p~-~~~~~~v~~G~- 114 (671)
...++|.|+ +.+.++.||+.++|.+++..+++.+++++|++|++. .++++|+..+.+++.+. +..|+.++...
T Consensus 12 ~~~~~t~~~----~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~ 87 (326)
T 3bo9_A 12 HMTVRTRVT----DLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILV 87 (326)
T ss_dssp CCCCCCHHH----HHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETT
T ss_pred ceeecchhH----HhcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 344666676 678899999999999999999999999999999985 45688876655543322 23567765444
Q ss_pred ChhhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc--CCC
Q psy3862 115 SAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI--GPG 192 (671)
Q Consensus 115 ~~~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg--a~G 192 (671)
.++..+.++.+++. +++++.+. .+.+..+++.++ +. ..++...+.+.+.++.+.++|+|.|++++ ++|
T Consensus 88 ~~~~~~~~~~~~~~--g~d~V~l~--~g~p~~~~~~l~---~~---g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~GG 157 (326)
T 3bo9_A 88 SPWADDLVKVCIEE--KVPVVTFG--AGNPTKYIRELK---EN---GTKVIPVVASDSLARMVERAGADAVIAEGMESGG 157 (326)
T ss_dssp STTHHHHHHHHHHT--TCSEEEEE--SSCCHHHHHHHH---HT---TCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSE
T ss_pred CCCHHHHHHHHHHC--CCCEEEEC--CCCcHHHHHHHH---Hc---CCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCCc
Confidence 33333556666676 66777764 345655544444 32 23444567889999999999999999987 455
Q ss_pred ceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHH
Q psy3862 193 SVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLEC 267 (671)
Q Consensus 193 ~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~ 267 (671)
|.- ..+++.+++.+. .+| ++|||.|++.+.+++++|||||.|| |+....-..+--..+.+.
T Consensus 158 ~~G------~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~GA~gV~vG--------s~~~~~~e~~~~~~~k~~ 223 (326)
T 3bo9_A 158 HIG------EVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQMG--------TRFVASVESDVHPVYKEK 223 (326)
T ss_dssp ECC------SSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEES--------HHHHTBSSCCSCHHHHHH
T ss_pred cCC------CccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhCCCEEEec--------hHHHcCccccccHHHHHH
Confidence 420 123444444442 356 7999999999999999999999999 666655544333333333
No 38
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.35 E-value=2.1e-12 Score=163.71 Aligned_cols=215 Identities=11% Similarity=0.055 Sum_probs=144.5
Q ss_pred CCCcceeeeeeecccCCCcccCceEEecCCC-ccccHHHHHHHHHcCCeEEe--ecCCCHHHHHHhhhcCccc---ccce
Q psy3862 35 SRSEVDITRTFTFRNSGKTYQGVPIIAANMD-TVGTFEMAKHLAKHGLFTTI--HKYYTLEEWKAFAVQNPDV---IKHV 108 (671)
Q Consensus 35 ~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~-~vt~~~lA~Ala~~gglgvI--h~n~~~Eeq~~~i~~~p~~---~~~~ 108 (671)
|..+++++|+|+ +.+. ++||+.++|+ ++++.+||.|++++||+|+| |.++++|++.+.+.+.... .+++
T Consensus 566 ~~~~~~l~t~~t----~~lg-~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~~~~~~~p~ 640 (2060)
T 2uva_G 566 SVGQTFVDTKMS----RLLG-VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEKAIPPGRGI 640 (2060)
T ss_dssp TTCCEEEECHHH----HHHT-SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGGGSCTTCCE
T ss_pred CCCceecchhhh----hccc-cceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHhhcccCCCe
Confidence 446788999998 4455 8999999999 68899999999999999999 7889999888777643322 2567
Q ss_pred EEecCC-ChhhH----HHHHHHHHhCCCceEEEeeccCCCChH--HHHHHHHHHHhCCCceEEEEEecc----HHHHHHH
Q psy3862 109 AVSSGI-SAKDL----AGLKEILAALPEIEYICLDVANGYTQT--FVDFVRRIREMYPKHVIIAGNVVT----GEMVEEL 177 (671)
Q Consensus 109 ~v~~G~-~~~d~----~rl~~l~~a~~~~d~Ivld~a~G~~~~--~~~~ik~lr~~~P~~~li~g~v~t----~e~a~~L 177 (671)
+++.-+ .+... +.+..+++. ++++..+....|.+.. +.+.+++. . ..++ ..+.+ .+.+.++
T Consensus 641 gvN~~~~~p~~~~~~~~~~~~~~~~--gv~i~gv~~~~G~p~~e~~~~~l~~~---g--i~~i-~~v~~~~~a~~~v~~l 712 (2060)
T 2uva_G 641 TVNLIYVNPRAMGWQIPLLGRLRAD--GVPIEGLTIGAGVPSIEVANEYIQTL---G--IRHI-SFKPGSVDAIQQVINI 712 (2060)
T ss_dssp EEEEETTCTTHHHHHHHHHHHHHTT--TCCEEEEEEESSCCCHHHHHHHHHHS---C--CSEE-EECCCSHHHHHHHHHH
T ss_pred EecccccCcccchhHHHHHHHHHHc--CCCcceEeecCCCCCHHHHHHHHHHc---C--CeEE-EecCCHHHHHHHHHHH
Confidence 776543 33322 345555555 5555223335566533 55666542 1 1122 22322 3444566
Q ss_pred HHCCCcEEE---ECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHH-----------HcCCC
Q psy3862 178 ILSGADVIK---VGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELI-----------LSGAD 236 (671)
Q Consensus 178 i~AGaD~Iv---Vdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li-----------~aGAd 236 (671)
.++|+|+|+ ++| ++||.-...+. .+.+.+++.|. .+| +||||+|++++.+++ .+|||
T Consensus 713 ~~aG~D~iV~~q~~G~eaGGH~g~~d~~--~~~l~lv~~i~~~~~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAd 790 (2060)
T 2uva_G 713 AKANPTFPIILQWTGGRGGGHHSFEDFH--QPILLMYSRIRKCSNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFD 790 (2060)
T ss_dssp HHHCTTSCEEEEECCTTSSSSCCSCCSH--HHHHHHHHHHHTSTTEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCS
T ss_pred HHcCCCEEEEeeeEcccCCCCCCccccc--chHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCC
Confidence 999999999 887 66663110000 12233444442 245 799999999999999 99999
Q ss_pred EEEEcccCCCccccceecccCcchhhhHHHHHHHhh
Q psy3862 237 VIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAH 272 (671)
Q Consensus 237 gvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~ 272 (671)
||+|| ||.++....|--.++-+.--.+.
T Consensus 791 gV~~G--------T~f~~t~Ea~~s~~~K~~lv~a~ 818 (2060)
T 2uva_G 791 GCMFG--------SRMMTAKEAHTSKQAKQAIVDAP 818 (2060)
T ss_dssp CEEES--------GGGGGBTTSCCCHHHHHHHHTSC
T ss_pred EEEEc--------hhhhcCcCCCCCHHHHHHHHhCC
Confidence 99999 99999988887766666654444
No 39
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.28 E-value=3.8e-11 Score=127.38 Aligned_cols=186 Identities=18% Similarity=0.164 Sum_probs=124.8
Q ss_pred CCcccCceEEecCCCccccHHHHHHHHHcCCeEEeec-CCC-HHHHHHhhhcCcc-cccceEEecCCC----hhhH-HHH
Q psy3862 51 GKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHK-YYT-LEEWKAFAVQNPD-VIKHVAVSSGIS----AKDL-AGL 122 (671)
Q Consensus 51 ~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~-n~~-~Eeq~~~i~~~p~-~~~~~~v~~G~~----~~d~-~rl 122 (671)
+.+.+++||+.++|.++++.+++.+++++||+|+++. +++ +++..+.+++... ...|+.++..+. ..++ +.+
T Consensus 10 ~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~ 89 (328)
T 2gjl_A 10 ETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYR 89 (328)
T ss_dssp HHHTCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHH
T ss_pred HHhCCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHH
Confidence 5667899999999999999999999999999999975 444 6665444432211 223555543332 2333 456
Q ss_pred HHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc--CCCceEEEEec
Q psy3862 123 KEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI--GPGSVCTTRLK 200 (671)
Q Consensus 123 ~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~ 200 (671)
+.+.+. +++++.+. .+.+..+++. +++. ...+...+.+.+.++.+.++|+|.|++++ ++||.-..
T Consensus 90 ~~~~~~--g~d~V~~~--~g~p~~~~~~---l~~~---gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~--- 156 (328)
T 2gjl_A 90 AAIIEA--GIRVVETA--GNDPGEHIAE---FRRH---GVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGED--- 156 (328)
T ss_dssp HHHHHT--TCCEEEEE--ESCCHHHHHH---HHHT---TCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSBCCCSS---
T ss_pred HHHHhc--CCCEEEEc--CCCcHHHHHH---HHHc---CCCEEeeCCCHHHHHHHHHcCCCEEEEECCCCCcCCCCc---
Confidence 666666 67777765 2345444444 4332 23444567889999999999999999977 34452000
Q ss_pred ccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCc
Q psy3862 201 NKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGY 258 (671)
Q Consensus 201 ~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~ 258 (671)
..+++.+++.+. .+| ++|||.+++.+.+++++|||||.|| |+.......
T Consensus 157 -~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~~GAdgV~vG--------s~~~~~~e~ 210 (328)
T 2gjl_A 157 -DIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMG--------TRFLATREC 210 (328)
T ss_dssp -CCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEES--------HHHHTSSSS
T ss_pred -cccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEC--------HHHHcCccc
Confidence 112334444442 356 7999999999999999999999999 666655443
No 40
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.25 E-value=8.4e-11 Score=125.10 Aligned_cols=197 Identities=19% Similarity=0.167 Sum_probs=133.1
Q ss_pred CCcccCceEEecCCCccccHHHHHHHHHcCCeEEeec-CCCHHHHHHhhhcCcc-cccceEEecCC-ChhhHHHHHHHHH
Q psy3862 51 GKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHK-YYTLEEWKAFAVQNPD-VIKHVAVSSGI-SAKDLAGLKEILA 127 (671)
Q Consensus 51 ~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~-n~~~Eeq~~~i~~~p~-~~~~~~v~~G~-~~~d~~rl~~l~~ 127 (671)
+.+.++.||+.++|.+++..+++.+++++|++|++.. ++++++..+.+.+... +..++.++.-. .+.-.+.++.+.+
T Consensus 7 ~~l~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~ 86 (332)
T 2z6i_A 7 ELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIE 86 (332)
T ss_dssp HHHTCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHH
T ss_pred HHhCCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHH
Confidence 4566899999999999999999999999999999854 5677765554433221 23466665444 2322244555666
Q ss_pred hCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcC--CCceEEEEecccCCc
Q psy3862 128 ALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIG--PGSVCTTRLKNKTSD 205 (671)
Q Consensus 128 a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga--~G~~~~t~v~~~~~~ 205 (671)
+ +.+.+.+.. +++..+++.+++ . ...+...+.+.+.++.+.++|+|+|++++. +||.- ..++
T Consensus 87 ~--g~d~V~~~~--g~p~~~i~~l~~---~---g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~~GG~~g------~~~~ 150 (332)
T 2z6i_A 87 E--GVKVVTTGA--GNPSKYMERFHE---A---GIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIG------KLTT 150 (332)
T ss_dssp T--TCSEEEECS--SCGGGTHHHHHH---T---TCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEECC------SSCH
T ss_pred C--CCCEEEECC--CChHHHHHHHHH---c---CCeEEEEeCCHHHHHHHHHcCCCEEEEECCCCCCCCC------CccH
Confidence 6 677777653 455555555543 2 233344567889999999999999999873 44420 1233
Q ss_pred chhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHh
Q psy3862 206 FFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAA 271 (671)
Q Consensus 206 ~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~ 271 (671)
+.+++.+. .+| ++|||.|++.+.+++++|||||.|| |+.+..-..|-..++.+....+
T Consensus 151 ~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~GAdgV~vG--------s~~l~~~e~~~~~~~k~~~~~~ 213 (332)
T 2z6i_A 151 MTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVG--------TRFVVAKESNAHPNYKEKILKA 213 (332)
T ss_dssp HHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEEC--------HHHHTBTTCCSCHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEec--------HHHhcCccccccHHHHHHHHhC
Confidence 44444442 367 7999999999999999999999999 7777665555444444444333
No 41
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.22 E-value=1.4e-10 Score=124.00 Aligned_cols=213 Identities=15% Similarity=0.144 Sum_probs=131.8
Q ss_pred cCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccc-------cHHHHHHHHHcCCeEE-eecC
Q psy3862 17 IKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG-------TFEMAKHLAKHGLFTT-IHKY 88 (671)
Q Consensus 17 ~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt-------~~~lA~Ala~~gglgv-Ih~n 88 (671)
....||++.|+|+.++..+.+++||+++| .+.+++.||+.++|++++ +..+|.+..+.| +++ +..+
T Consensus 21 ~~~~f~~~~l~p~~l~~~~~~~~d~~~~i-----~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G-~~~~~~~~ 94 (349)
T 1p0k_A 21 RETGLDDITFVHVSLPDLALEQVDISTKI-----GELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAG-IPLAVGSQ 94 (349)
T ss_dssp CCCSGGGEEECCCSCCCCCGGGCBCCEEE-----TTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHT-CCEECCCC
T ss_pred ccCccceEEEEccccCCCCcccCCceeEE-----CCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcC-CcEEeccc
Confidence 35789999999999986666899999999 478899999999998877 557888766655 443 4433
Q ss_pred CC-HHH-----HHHhhhc-CcccccceEEec--CCChhhHHHHHHHHHhCCCceEEEeeccC--------CCC--hHHHH
Q psy3862 89 YT-LEE-----WKAFAVQ-NPDVIKHVAVSS--GISAKDLAGLKEILAALPEIEYICLDVAN--------GYT--QTFVD 149 (671)
Q Consensus 89 ~~-~Ee-----q~~~i~~-~p~~~~~~~v~~--G~~~~d~~rl~~l~~a~~~~d~Ivld~a~--------G~~--~~~~~ 149 (671)
.+ +|+ +.+.++. .+ ..|+..+. +.++.+..+ .++. .+.+++.++... +.. ..+.+
T Consensus 95 ~~~l~~~~~~~~~~~~~~~~~--~~pv~~~i~~~~~~~~~~~---~~~~-~gad~i~i~~~~~~~~~~~~~~~~~~~~~~ 168 (349)
T 1p0k_A 95 MSALKDPSERLSYEIVRKENP--NGLIFANLGSEATAAQAKE---AVEM-IGANALQIHLNVIQEIVMPEGDRSFSGALK 168 (349)
T ss_dssp TTTTTCHHHHHHHHHHHHHCS--SSCEEEEEETTCCHHHHHH---HHHH-TTCSEEEEEECTTTTC--------CTTHHH
T ss_pred hhcccCcccccceehhhhhCC--CceeEEeecCCCCHHHHHH---HHHh-cCCCeEEecccchhhhcCCCCCcchHHHHH
Confidence 11 211 2222221 12 22443332 344443333 3322 146776555432 111 23678
Q ss_pred HHHHHHHhC--CCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEE-----EEe------ccc-CCcchhhhhc---
Q psy3862 150 FVRRIREMY--PKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCT-----TRL------KNK-TSDFFLIQFY--- 212 (671)
Q Consensus 150 ~ik~lr~~~--P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~-----t~v------~~~-~~~~~~i~~i--- 212 (671)
.++++++.. |...++++...+.+.++.+.++|||.|++.+.+|+... +.. ... .++...+..+
T Consensus 169 ~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~ 248 (349)
T 1p0k_A 169 RIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSE 248 (349)
T ss_dssp HHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHh
Confidence 888887653 65555556667899999999999999999876554311 111 000 1222222222
Q ss_pred -cccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 213 -SCIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 213 -~~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+| +.|||.|++.+..++++|||+|.||
T Consensus 249 ~~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 249 FPASTMIASGGLQDALDVAKAIALGASCTGMA 280 (349)
T ss_dssp CTTSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 1355 6999999999999999999999998
No 42
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.20 E-value=1.9e-10 Score=140.21 Aligned_cols=177 Identities=11% Similarity=0.196 Sum_probs=106.9
Q ss_pred hHHhhhhhccccccccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccc-c----HHHHHHH
Q psy3862 2 FQKFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG-T----FEMAKHL 76 (671)
Q Consensus 2 ~~~~~~~~~~~~~~~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt-~----~~lA~Al 76 (671)
|++|.+.+-+ ....+|+|+++.+..++..|.++||+.+.| ..||++++|+++. + ..||.|+
T Consensus 810 ~~~~~~~~~~----~~~~~~~dl~~~~~~l~~i~~~ev~~~~~I----------~~Pf~isaMS~GalS~ea~~aLA~Aa 875 (1479)
T 1ea0_A 810 FKKYSEQVNK----RPPMQLRDLLELRSTKAPVPVDEVESITAI----------RKRFITPGMSMGALSPEAHGTLNVAM 875 (1479)
T ss_dssp HHHHHHHHHT----SCCCSGGGGEEECCSSCCCCGGGSCCHHHH----------HTTEEEEECCBTTBCHHHHHHHHHHH
T ss_pred HHHHHhhhcc----CCCCchhhhhhccCCCCCCCcccccccccc----------cCCeEecCccccccCHHHHHHHHHHH
Confidence 4555544422 346789999999988887777888876644 6799999999753 2 4799999
Q ss_pred HHcCCeEEeecC-CCHHHHHH---------hhhc-Cc-------cccc---ceEEe--cCCC--------hhhH-HHHHH
Q psy3862 77 AKHGLFTTIHKY-YTLEEWKA---------FAVQ-NP-------DVIK---HVAVS--SGIS--------AKDL-AGLKE 124 (671)
Q Consensus 77 a~~gglgvIh~n-~~~Eeq~~---------~i~~-~p-------~~~~---~~~v~--~G~~--------~~d~-~rl~~ 124 (671)
++.|+++.+..+ +++|+... .+++ .+ .... .+.+- -|.. ...+ +.+.+
T Consensus 876 ~~aGg~~~tGeGg~~pe~~~~~~~g~~~~~~IrQ~asg~FGVn~~~l~~a~~ieIKigQGAKpG~GG~Lp~~kv~~~IA~ 955 (1479)
T 1ea0_A 876 NRIGAKSDSGEGGEDPARFRPDKNGDNWNSAIKQVASGRFGVTAEYLNQCRELEIKVAQGAKPGEGGQLPGFKVTEMIAR 955 (1479)
T ss_dssp HHTTCEEECCTTCCCGGGSSBCTTSCBCCCSEEEECSSCTTCCHHHHTSCSEEEEECCCTTSTTTCCEECGGGCCHHHHH
T ss_pred HHcCCeeEcCCCccCHHHhhhccccchhhhhhhhhcCCCCCcChHHccccchHHHHHhccCCCCcCCCCCHHHHHHHHHH
Confidence 999999888765 45543210 1111 01 0000 01111 1111 1111 23333
Q ss_pred HHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCC---ceEEEEEeccHHHHHHHHHCCCcEEEECcCCC
Q psy3862 125 ILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPK---HVIIAGNVVTGEMVEELILSGADVIKVGIGPG 192 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~---~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G 192 (671)
+....++.+.+.....+.. .+.+.+.++++|+..|. ..+++++....+.|+.+.++|||+|+++|..|
T Consensus 956 ~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eG 1028 (1479)
T 1ea0_A 956 LRHSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSG 1028 (1479)
T ss_dssp HHTCCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTC
T ss_pred HcCCCCCCCccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCC
Confidence 3333456665543222221 25577888888877644 44555554456788889999999999988543
No 43
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.16 E-value=6.1e-10 Score=120.07 Aligned_cols=186 Identities=18% Similarity=0.208 Sum_probs=116.3
Q ss_pred eeeeeecccCCCcccCceEEecCCCc-cccHHHHHHHHHcCCeEEeecC-CCHHHHHHhhhcCcc-cccceEEecCC-C-
Q psy3862 41 ITRTFTFRNSGKTYQGVPIIAANMDT-VGTFEMAKHLAKHGLFTTIHKY-YTLEEWKAFAVQNPD-VIKHVAVSSGI-S- 115 (671)
Q Consensus 41 lst~lt~r~~~~~~l~~Piv~a~M~~-vt~~~lA~Ala~~gglgvIh~n-~~~Eeq~~~i~~~p~-~~~~~~v~~G~-~- 115 (671)
|+|+++ +.+ ++||+.++|.+ +++.+||.+++++||+|+++.+ +++|+..+.+++.+. +.+|++++.=. .
T Consensus 1 ~~t~~~----~~~--~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~ 74 (369)
T 3bw2_A 1 MSSALT----DLF--PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGLTGRPFGVNVFMPQP 74 (369)
T ss_dssp --CTTT----TSS--SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHHCCSCEEEEEECCCC
T ss_pred CCchhh----hhC--cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHhCCCCeEEEEecCCC
Confidence 356665 444 89999999995 8999999999999999999865 688776655543221 22455442111 0
Q ss_pred ----hh-----------------------------hH-HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCc
Q psy3862 116 ----AK-----------------------------DL-AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKH 161 (671)
Q Consensus 116 ----~~-----------------------------d~-~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~ 161 (671)
.. .+ +.++.+.+. +++++.+. .+.+ ..+.++.+++. .
T Consensus 75 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--g~~~V~~~--~g~~--~~~~i~~~~~~---g 145 (369)
T 3bw2_A 75 ELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDD--PVPVVSFH--FGVP--DREVIARLRRA---G 145 (369)
T ss_dssp CC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHS--CCSEEEEE--SSCC--CHHHHHHHHHT---T
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhc--CCCEEEEe--CCCC--cHHHHHHHHHC---C
Confidence 00 01 223334444 55666553 2232 12344444432 2
Q ss_pred eEEEEEeccHHHHHHHHHCCCcEEEECc--CCCceEEE--Eecc-c--CCcchhhhhcc---ccC--CccccccHHHHHH
Q psy3862 162 VIIAGNVVTGEMVEELILSGADVIKVGI--GPGSVCTT--RLKN-K--TSDFFLIQFYS---CIP--QAGNVVTGEMVEE 229 (671)
Q Consensus 162 ~li~g~v~t~e~a~~Li~AGaD~IvVdg--a~G~~~~t--~v~~-~--~~~~~~i~~i~---~~p--~aGnV~t~~~a~~ 229 (671)
.++...+.+.+.++.+.++|+|+|++++ ++||.-.. .... . .+.+.+++.+. .+| ++|||.|++.+.+
T Consensus 146 ~~v~~~v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~ 225 (369)
T 3bw2_A 146 TLTLVTATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIAA 225 (369)
T ss_dssp CEEEEEESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHHH
Confidence 3445567888999999999999999976 35552110 0000 0 11234444442 367 7999999999999
Q ss_pred HHHcCCCEEEEc
Q psy3862 230 LILSGADVIKVG 241 (671)
Q Consensus 230 li~aGAdgvkVG 241 (671)
++++|||+|.||
T Consensus 226 ~l~~GAd~V~vG 237 (369)
T 3bw2_A 226 VLAAGADAAQLG 237 (369)
T ss_dssp HHHTTCSEEEES
T ss_pred HHHcCCCEEEEC
Confidence 999999999999
No 44
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.12 E-value=7.8e-11 Score=127.00 Aligned_cols=267 Identities=13% Similarity=0.095 Sum_probs=151.7
Q ss_pred cCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCH------HHHHHHHHcCCeEEEc--cC-
Q psy3862 294 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTF------EMAKHLAKHGLFTTIH--KY- 364 (671)
Q Consensus 294 ~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~------~mA~~la~~Gglgvih--r~- 364 (671)
.-+||||.|+|..-...+.++|||+++|- ...+..||+-|||...+.. .+|++-+++|-..++= +.
T Consensus 53 ~~~fd~i~l~~~~lP~~~~~~vd~st~i~-----g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~ 127 (365)
T 3sr7_A 53 YNSFDDIELIHHSLPDYDLAEIDLSTHFA-----GQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA 127 (365)
T ss_dssp CCGGGGEEECCCSSCCSCGGGCCCCEEET-----TEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------
T ss_pred CCCcceEEEECCCCCcCCcccccceEEEC-----CEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc
Confidence 35799999999998888889999999985 5789999999999776653 3888888888877762 22
Q ss_pred -CCHHHHHHH-H-hcCcccccceeeecc-cChhhHHHHH-HcCCcEEEEccccc--------ccccc--ccccccccccc
Q psy3862 365 -YTLEEWKAF-A-VQNPDVIKHVADGGC-TSPGDVAKAM-GAGADFVMLGGMFA--------GHDQS--GGELTNIEYMF 429 (671)
Q Consensus 365 -~~~e~~~~~-v-~~~~~~~~~v~~~~~-~~~~~~~~l~-~aG~d~i~id~~a~--------gh~~~--~~~~~~~~~~~ 429 (671)
.+++. ..| + +..|+.+ .++..+. ...++..+++ .+|+|.|.|. ... ||... .++
T Consensus 128 le~~~~-~~~~v~r~~P~~~-~ianig~~~~~e~~~~~ve~~~adal~ih-ln~~qe~~~p~Gd~~~~~~~~-------- 196 (365)
T 3sr7_A 128 LKNPDD-TSYQVKKSRPHLL-LATNIGLDKPYQAGLQAVRDLQPLFLQVH-INLMQELLMPEGEREFRSWKK-------- 196 (365)
T ss_dssp ------------------CC-EEEEEETTSCHHHHHHHHHHHCCSCEEEE-ECHHHHHTSSSSCCCCHHHHH--------
T ss_pred ccCccc-cceEehhhCCCCc-EEEEeCCCCCHHHHHHHHHhcCCCEEEEe-ccccccccCCCCCCcHHHHHH--------
Confidence 12222 222 2 2234421 1222222 2346677776 5799999987 331 22211 112
Q ss_pred cccccccccccC-ceeecccc---CchhHHH-HHHcCCcEEEECccccCCcc---CCCcEEEeCCeEEEEeeCcccHHHH
Q psy3862 430 FPLVGDMNSYLG-GVVDGGCT---SPGDVAK-AMGAGADFVMLGGMFAGHDQ---SGGELIEKDGKKVKLFYGMSSTTAM 501 (671)
Q Consensus 430 ~~~~~~~~~~~~-~~i~gG~v---~t~~~a~-~l~aGAd~V~vG~~g~G~s~---ctt~~v~~~g~~~k~g~G~~q~tAi 501 (671)
.+.++++.++ .+++-+ + .+.+.++ +.++|||+|.|+. .+|++. ++.|.... .....+|.|+..++
T Consensus 197 --~I~~l~~~~~~PVivK~-vg~g~s~e~A~~l~~aGad~I~V~g-~GGt~~a~ie~~r~~~~---~~~~~~g~pt~~~L 269 (365)
T 3sr7_A 197 --HLSDYAKKLQLPFILKE-VGFGMDVKTIQTAIDLGVKTVDISG-RGGTSFAYIENRRGGNR---SYLNQWGQTTAQVL 269 (365)
T ss_dssp --HHHHHHHHCCSCEEEEE-CSSCCCHHHHHHHHHHTCCEEECCC-BC--------------C---GGGTTCSCBHHHHH
T ss_pred --HHHHHHHhhCCCEEEEE-CCCCCCHHHHHHHHHcCCCEEEEeC-CCCcccchhhccccccc---cccccccccHHHHH
Confidence 2334444443 244544 3 5667777 6799999999985 444221 12221000 00014688888888
Q ss_pred Hhhcccccc-ccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEecccccccccchhhhcccc
Q psy3862 502 DKHAGGVAE-YRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDILGGL 580 (671)
Q Consensus 502 ~~~a~~~~~-y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~~~~~~G~ 580 (671)
.++.....+ -...+|+ |+++.|++|||+- |++ .|.++.. ++
T Consensus 270 ~~v~~~~~~ipvia~GG---I~~g~Dv~KaLal-------GAd---------------aV~ig~~----------~l--- 311 (365)
T 3sr7_A 270 LNAQPLMDKVEILASGG---IRHPLDIIKALVL-------GAK---------------AVGLSRT----------ML--- 311 (365)
T ss_dssp HHHGGGTTTSEEEECSS---CCSHHHHHHHHHH-------TCS---------------EEEESHH----------HH---
T ss_pred HHHHHhcCCCeEEEeCC---CCCHHHHHHHHHc-------CCC---------------EEEECHH----------HH---
Confidence 876433211 1234553 7899999999983 332 1111000 00
Q ss_pred cccceeeccccccccccccccchhccccccccCCCceEecccccCHHHHHHHHHHHHhhhccccCccccccccccc
Q psy3862 581 RSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRA 656 (671)
Q Consensus 581 ~~~k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~el~~~a 656 (671)
+.. ...| ...+.+++..+...|+..|.++|.++++||++..
T Consensus 312 ------~a~----------------------~~~G-------~~~v~~~l~~l~~eL~~~m~~~G~~si~eL~~~~ 352 (365)
T 3sr7_A 312 ------ELV----------------------EQHS-------VHEVIAIVNGWKEDLRLIMCALNCQTIAELRNVD 352 (365)
T ss_dssp ------HHH----------------------HHSC-------HHHHHHHHHHHHHHHHHHHHHTTCSSTGGGGGCC
T ss_pred ------HHH----------------------HhcC-------hHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccCC
Confidence 000 0011 1246788899999999999999999999998653
No 45
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.11 E-value=2.7e-10 Score=121.15 Aligned_cols=217 Identities=20% Similarity=0.202 Sum_probs=127.6
Q ss_pred ccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCcccc------HHHHHHHHHcCCeEEeecCC
Q psy3862 16 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGT------FEMAKHLAKHGLFTTIHKYY 89 (671)
Q Consensus 16 ~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~------~~lA~Ala~~gglgvIh~n~ 89 (671)
.....||++.|+|+.++..+.+++||+++|. +.+++.|++.+||++++. ..+|.+.++.|..-.+..+.
T Consensus 23 ~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~-----g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~~~~~ 97 (332)
T 1vcf_A 23 KTTTGLEGFRLRYQALAGLALSEVDLTTPFL-----GKTLKAPFLIGAMTGGEENGERINLALAEAAEALGVGMMLGSGR 97 (332)
T ss_dssp CCCCSGGGEEECCCTTCCCCGGGCCCCEEET-----TEEESSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEEEECH
T ss_pred cchhhhhhcEEehhhCCCCCCCCCCcceEEC-----CcccCCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEeCCch
Confidence 3456899999999999866668999999994 788999999999998653 36788777776433343331
Q ss_pred C-HHH---HHHhhhcCcccccceEEec------CCChhhHHHHHHHHHhCCCceEEEeecc-------CCCC--hHHHHH
Q psy3862 90 T-LEE---WKAFAVQNPDVIKHVAVSS------GISAKDLAGLKEILAALPEIEYICLDVA-------NGYT--QTFVDF 150 (671)
Q Consensus 90 ~-~Ee---q~~~i~~~p~~~~~~~v~~------G~~~~d~~rl~~l~~a~~~~d~Ivld~a-------~G~~--~~~~~~ 150 (671)
+ +|+ ...+..+......|+..+. +..++...++.+..+ .+.+.++.. .++. ..+.+.
T Consensus 98 ~~le~~~~~~~~ql~~~~~d~pv~~~~~~~q~~~~~~~~~~~a~~~~~----~~a~~i~~n~~~~~~~~~~~~~~~~~~~ 173 (332)
T 1vcf_A 98 ILLERPEALRSFRVRKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLE----ADALAFHVNPLQEAVQRGDTDFRGLVER 173 (332)
T ss_dssp HHHHCTTTHHHHCCTTTCSSSCEEEEEEGGGGGTCCHHHHHHHHHHHT----CSEEEEECCHHHHHHTTSCCCCTTHHHH
T ss_pred hcccCCCccceEEeeccCCCceeecccChhhhhccChHHHHHHHhhcC----CCceeeccchHHHHhcCCCccHHHHHHH
Confidence 1 232 1111111111112332211 223333333333332 344333321 1221 235677
Q ss_pred HHHHHH-hCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceE--E---EE---------ecccCCcchhhhhcc--
Q psy3862 151 VRRIRE-MYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVC--T---TR---------LKNKTSDFFLIQFYS-- 213 (671)
Q Consensus 151 ik~lr~-~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~--~---t~---------v~~~~~~~~~i~~i~-- 213 (671)
++++++ ..|...+..+...+.+.++.|.++|||+|++.+.+|+.- + +. .....+++..+..+.
T Consensus 174 i~~vr~~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~ 253 (332)
T 1vcf_A 174 LAELLPLPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREV 253 (332)
T ss_dssp HHHHCSCSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHH
T ss_pred HHHHHcCCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHh
Confidence 777766 124333322222688999999999999999988776420 0 00 001113333333331
Q ss_pred --ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 214 --CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 214 --~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+| +.|||.|++.+..++++|||+|.+|
T Consensus 254 ~~~ipvia~GGI~~~~d~~kal~~GAd~V~ig 285 (332)
T 1vcf_A 254 LPHLPLVASGGVYTGTDGAKALALGADLLAVA 285 (332)
T ss_dssp CSSSCEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHHHhCCChHhhh
Confidence 356 6999999999999999999999988
No 46
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.10 E-value=3e-09 Score=114.89 Aligned_cols=207 Identities=18% Similarity=0.158 Sum_probs=124.3
Q ss_pred CCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCC--ccc----cHHHHHHHHHcCCeEEeecC--C
Q psy3862 18 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMD--TVG----TFEMAKHLAKHGLFTTIHKY--Y 89 (671)
Q Consensus 18 ~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~--~vt----~~~lA~Ala~~gglgvIh~n--~ 89 (671)
...||++.|+|+.++. .+++||+|+| .+.+++.||+.+||. +.+ +..+|.+.++.|...++..+ .
T Consensus 49 ~~~f~~i~l~pr~L~~--~~~~d~st~i-----~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~ 121 (368)
T 2nli_A 49 DRAWKHKLLYPRLAQD--VEAPDTSTEI-----LGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGA 121 (368)
T ss_dssp HHGGGGEEECCCCCCC--CSCCCCCEEE-----TTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCSS
T ss_pred HHHHhheeeeccccCC--CccCCcceEE-----CCEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHhH
Confidence 3579999999999984 5799999999 488999999999998 443 46788877777766556544 4
Q ss_pred CHHHHHHhhhcCcccccceEEecCCChhhH-HHHHHHHHhCCCceE--EEeeccC-------------------------
Q psy3862 90 TLEEWKAFAVQNPDVIKHVAVSSGISAKDL-AGLKEILAALPEIEY--ICLDVAN------------------------- 141 (671)
Q Consensus 90 ~~Eeq~~~i~~~p~~~~~~~v~~G~~~~d~-~rl~~l~~a~~~~d~--Ivld~a~------------------------- 141 (671)
++|+........|. -+++-..-..+.. +.++..-.+ +.++ +.+|..-
T Consensus 122 ~le~v~~~~~~~~~---~~QLy~~~d~~~~~~~~~ra~~a--G~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~ 196 (368)
T 2nli_A 122 TFEEISEGLNGGPR---WFQIYMAKDDQQNRDILDEAKSD--GATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYL 196 (368)
T ss_dssp CHHHHHHHHTTCCE---EEEECCBSSHHHHHHHHHHHHHT--TCSCEEEESBCC---CBC--------CCSCCHHHHHHH
T ss_pred HHHHHHHhCCCCCE---EEEEeccCCHHHHHHHHHHHHHC--CCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhccc
Confidence 57764332101110 0111100011101 112222122 2222 2222100
Q ss_pred ---------------CCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcc
Q psy3862 142 ---------------GYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDF 206 (671)
Q Consensus 142 ---------------G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~ 206 (671)
..+....+.++++++..+ ..+++..+.+.+.++.+.++|||+|++.+.+|+.. ....+++
T Consensus 197 ~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~-~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~~----~~g~~~~ 271 (368)
T 2nli_A 197 RGTAEGMSLNNIYGASKQKISPRDIEEIAGHSG-LPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQL----YEAPGSF 271 (368)
T ss_dssp TTSGGGC-----CTTBCSBCCHHHHHHHHHHSS-SCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSC----SSCCCHH
T ss_pred ccCCCCchHHhhhhccCchhhHHHHHHHHHHcC-CCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCCC----CCCCChH
Confidence 011112344777776543 23444345789999999999999999976555320 0011233
Q ss_pred hhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 207 FLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 207 ~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+..+. .+| +.|||-+++.+..++++|||+|.||
T Consensus 272 ~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 272 DTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALG 313 (368)
T ss_dssp HHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3333332 356 7999999999999999999999888
No 47
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.03 E-value=7.3e-09 Score=112.32 Aligned_cols=206 Identities=16% Similarity=0.205 Sum_probs=125.8
Q ss_pred cCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCc--c----ccHHHHHHHHHcCCeEEeecC--
Q psy3862 17 IKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDT--V----GTFEMAKHLAKHGLFTTIHKY-- 88 (671)
Q Consensus 17 ~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~--v----t~~~lA~Ala~~gglgvIh~n-- 88 (671)
....||++.|+|+.++. .+++||+|+| .+.+++.||+.+||.+ . ++..+|.+.++.|...++...
T Consensus 40 n~~~f~~i~l~pr~L~~--~~~~d~st~i-----~G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss~s~ 112 (380)
T 1p4c_A 40 NRDVFQQWRFKPKRLVD--VSRRSLQAEV-----LGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASN 112 (380)
T ss_dssp HHHGGGGEEECCCCSCC--CSSCBCCEEE-----TTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECTTCS
T ss_pred HHHHHhheeeeccccCC--CccCcceeEE-----CCeecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCcccc
Confidence 34679999999999984 5799999999 4899999999999966 3 567788888888755556643
Q ss_pred CCHHHHHHhhhcCcccccceEEecCCChh-hHHHHHHHHHhCCCceE--EEeecc-------------------------
Q psy3862 89 YTLEEWKAFAVQNPDVIKHVAVSSGISAK-DLAGLKEILAALPEIEY--ICLDVA------------------------- 140 (671)
Q Consensus 89 ~~~Eeq~~~i~~~p~~~~~~~v~~G~~~~-d~~rl~~l~~a~~~~d~--Ivld~a------------------------- 140 (671)
+++|+..... ..|. -+++... ... ..+.++...++ +..+ +++|..
T Consensus 113 ~~le~i~~~~-~~~~---~fQly~~-~~~~~~~~i~~a~~a--G~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~ 185 (380)
T 1p4c_A 113 MSIEDLARQC-DGDL---WFQLYVI-HREIAQGMVLKALHT--GYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFE 185 (380)
T ss_dssp SCHHHHHHHC-CSCE---EEEECCS-SHHHHHHHHHHHHHT--TCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGT
T ss_pred CCHHHHHhcc-CCCe---EEEEEec-hHHHHHHHHHHHHHc--CCCEEEEeecCccccchhHHHhcCCCCccccCHHHhh
Confidence 5677644320 1110 0111100 000 01112222222 1111 111110
Q ss_pred ---------CC------------CChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEe
Q psy3862 141 ---------NG------------YTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRL 199 (671)
Q Consensus 141 ---------~G------------~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v 199 (671)
.+ .+....+.++++++..+ ..+++..+.+.+.++.++++|||.|++.+.+|.. .
T Consensus 186 ~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~-~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~----~ 260 (380)
T 1p4c_A 186 GIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWP-HKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQ----L 260 (380)
T ss_dssp TCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCC-SEEEEEEECCHHHHHHHHHTTCSEEEECCGGGTS----C
T ss_pred hhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcC-CCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCc----C
Confidence 00 11112356777777653 3445445789999999999999999996544421 0
Q ss_pred cccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 200 KNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 200 ~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
-...+++..+..+. ..| +.|||.+++.+..++++|||+|-+|
T Consensus 261 d~~~~~~~~l~~v~~~~~~pVia~GGI~~~~dv~kal~~GAdaV~iG 307 (380)
T 1p4c_A 261 DCAISPMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLG 307 (380)
T ss_dssp TTCCCGGGTHHHHHHHHCSCEEECSSCCSHHHHHHHHHTTCSCEEES
T ss_pred CCCcCHHHHHHHHHHHcCCeEEEECCCCCHHHHHHHHHhCCcHhheh
Confidence 00113333333332 235 6999999999999999999999888
No 48
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.01 E-value=3.9e-09 Score=114.06 Aligned_cols=206 Identities=18% Similarity=0.190 Sum_probs=123.0
Q ss_pred CCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccc------cHHHHHHHHHcCCeEEeec--CC
Q psy3862 18 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG------TFEMAKHLAKHGLFTTIHK--YY 89 (671)
Q Consensus 18 ~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt------~~~lA~Ala~~gglgvIh~--n~ 89 (671)
...||++.|+|+.++. .+++||+++|. +.+++.||+.+||+... +..+|.+.++.|...++.. ..
T Consensus 40 ~~~f~~i~l~pr~l~~--~~~~d~~t~i~-----G~~~~~Pi~iAPmg~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~ 112 (370)
T 1gox_A 40 RNAFSRILFRPRILID--VTNIDMTTTIL-----GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATS 112 (370)
T ss_dssp HHGGGGEEECCCCSCC--CSCCBCCEEET-----TEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSS
T ss_pred HHHHhhheeeccccCC--CCCCCCceEEC-----CcccCCceeEcccchhhhccchHHHHHHHHHHHcCCCeeccCCCCC
Confidence 3579999999999984 47999999994 78899999999995321 2358887777776666653 45
Q ss_pred CHHHHHHhhhcCcccccceEEecCCChhhH-HHHHHHHHhCCCceEE--EeeccC-------------------------
Q psy3862 90 TLEEWKAFAVQNPDVIKHVAVSSGISAKDL-AGLKEILAALPEIEYI--CLDVAN------------------------- 141 (671)
Q Consensus 90 ~~Eeq~~~i~~~p~~~~~~~v~~G~~~~d~-~rl~~l~~a~~~~d~I--vld~a~------------------------- 141 (671)
++|+.... .| ...-+++..+-.++.. +.++..... +.+++ .+|...
T Consensus 113 ~ieev~~~---~~-~~~~~QLy~~~d~~~~~~~~~~a~~~--G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~ 186 (370)
T 1gox_A 113 SVEEVAST---GP-GIRFFQLYVYKDRNVVAQLVRRAERA--GFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEG 186 (370)
T ss_dssp CHHHHHTT---CC-CCEEEEECCBSSHHHHHHHHHHHHHT--TCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSS
T ss_pred CHHHHHhh---cC-CCceEEEecCCCchHHHHHHHHHHHC--CCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhh
Confidence 66664322 12 1111222111111111 222222222 33332 222100
Q ss_pred ----------C-----------CChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEec
Q psy3862 142 ----------G-----------YTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLK 200 (671)
Q Consensus 142 ----------G-----------~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~ 200 (671)
+ .+....+.++++++..+ ..+++..+.+.+.++.+.++|+|+|++.+.+|.. +.
T Consensus 187 ~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~-~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~----~~ 261 (370)
T 1gox_A 187 IDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITS-LPILVKGVITAEDARLAVQHGAAGIIVSNHGARQ----LD 261 (370)
T ss_dssp SCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCC-SCEEEECCCSHHHHHHHHHTTCSEEEECCGGGTS----ST
T ss_pred hhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhC-CCEEEEecCCHHHHHHHHHcCCCEEEECCCCCcc----CC
Confidence 0 01111244666666552 3455555678999999999999999995533321 00
Q ss_pred ccCCcchhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 201 NKTSDFFLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 201 ~~~~~~~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
...+++..+..+. .+| ..|||-+++.+..++++|||+|.||
T Consensus 262 ~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iG 309 (370)
T 1gox_A 262 YVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIG 309 (370)
T ss_dssp TCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred CcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeec
Confidence 0012222222221 355 6999999999999999999999988
No 49
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=98.98 E-value=1.7e-08 Score=113.44 Aligned_cols=211 Identities=15% Similarity=0.133 Sum_probs=123.4
Q ss_pred CCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCc---c----ccHHHHHHHHH--cCCeEEeecC
Q psy3862 18 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDT---V----GTFEMAKHLAK--HGLFTTIHKY 88 (671)
Q Consensus 18 ~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~---v----t~~~lA~Ala~--~gglgvIh~n 88 (671)
...||++.|+|+.+. +.+++||+++| .+.+++.||+.+||++ + ++..+|.+.++ .|..-++..+
T Consensus 158 ~~af~~i~l~pr~L~--dv~~~d~st~i-----~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~ 230 (511)
T 1kbi_A 158 HNAYHRIFFKPKILV--DVRKVDISTDM-----LGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTL 230 (511)
T ss_dssp HHGGGGCEECCCCSC--CCSSCBCCEEE-----TTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTT
T ss_pred HHHhhhhcccccccc--CcccccCcccc-----CCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCc
Confidence 357999999999994 35799999999 4789999999999997 3 24567775555 4433345433
Q ss_pred --CCHHHHHHhhhcCcccccceEEecCCChhhHHHHHH-HHHhCCCceEEEeeccC-CC---------------------
Q psy3862 89 --YTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKE-ILAALPEIEYICLDVAN-GY--------------------- 143 (671)
Q Consensus 89 --~~~Eeq~~~i~~~p~~~~~~~v~~G~~~~d~~rl~~-l~~a~~~~d~Ivld~a~-G~--------------------- 143 (671)
.++|+..+.. ..+....-+++..+-.....+.+.+ .-.+....-.+.+|... |.
T Consensus 231 a~~s~e~v~~~~-~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g 309 (511)
T 1kbi_A 231 ASCSPEEIIEAA-PSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKK 309 (511)
T ss_dssp CSSCHHHHHHTC-CCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------C
T ss_pred ccCCHHHHHhhc-CCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCccccccccc
Confidence 5677643321 0111111122221211121222222 22231122234444322 10
Q ss_pred ------------------ChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCc
Q psy3862 144 ------------------TQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSD 205 (671)
Q Consensus 144 ------------------~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~ 205 (671)
+....+.++++++..+ ..+++-.+.+.+.|+.+.++|||+|++.+.+|+. +-...++
T Consensus 310 ~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~-~PvivKgv~~~e~A~~a~~aGad~I~vs~hgG~~----~d~~~~~ 384 (511)
T 1kbi_A 310 TNVEESQGASRALSKFIDPSLTWKDIEELKKKTK-LPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQ----LDFSRAP 384 (511)
T ss_dssp CCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHHCS-SCEEEEEECSHHHHHHHHHTTCSEEEECCTTTTS----STTCCCH
T ss_pred ccccccccHHHHHhhccChHhHHHHHHHHHHHhC-CcEEEEeCCCHHHHHHHHHcCCCEEEEcCCCCcc----CCCCCch
Confidence 0011345777776542 2344445567899999999999999997755531 1000122
Q ss_pred chhhhhc----------cccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 206 FFLIQFY----------SCIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 206 ~~~i~~i----------~~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+..+..+ ..+| +.|||-+++.+..+|++|||+|.||
T Consensus 385 ~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 385 IEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLG 432 (511)
T ss_dssp HHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 2222222 1345 6999999999999999999999888
No 50
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=98.98 E-value=6.2e-09 Score=113.30 Aligned_cols=207 Identities=14% Similarity=0.150 Sum_probs=121.0
Q ss_pred CCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccc------cHHHHHHHHHcCCeEEeecC--C
Q psy3862 18 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG------TFEMAKHLAKHGLFTTIHKY--Y 89 (671)
Q Consensus 18 ~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt------~~~lA~Ala~~gglgvIh~n--~ 89 (671)
...||++.|+|+.++. .+++||+|+| .+.+++.||+.+||.... +..+|.+.++.|...++... +
T Consensus 63 ~~~f~~i~l~pr~L~~--~~~~d~st~i-----~G~~l~~Pi~iAPmg~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~ 135 (392)
T 2nzl_A 63 IAAFSRWKLYPRMLRN--VAETDLSTSV-----LGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATS 135 (392)
T ss_dssp HHHHHHSCBCCCCSSC--CTTCBCCEEE-----TTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCEEEECTTCSS
T ss_pred HHhhheEEeehhhccC--CcCCCcceEE-----CCEecCCceEeccccccccccchHHHHHHHHHHHcCCCeeccchHHH
Confidence 3569999999999984 4799999999 488999999999994321 24588877777766666543 5
Q ss_pred CHHHHHHhhhcCcccccceEEecCCChhhH-HHHHHHHHhCCCceEEEe--eccC-------------------------
Q psy3862 90 TLEEWKAFAVQNPDVIKHVAVSSGISAKDL-AGLKEILAALPEIEYICL--DVAN------------------------- 141 (671)
Q Consensus 90 ~~Eeq~~~i~~~p~~~~~~~v~~G~~~~d~-~rl~~l~~a~~~~d~Ivl--d~a~------------------------- 141 (671)
++|+..... |+...-+++-..-..+.. +.++..-.+ +.+++.+ |...
T Consensus 136 ~le~v~~~~---~~~~~~~QLy~~~d~~~~~~~~~ra~~~--G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~ 210 (392)
T 2nzl_A 136 SIEEVAEAG---PEALRWLQLYIYKDREVTKKLVRQAEKM--GYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFET 210 (392)
T ss_dssp CHHHHHHHC---TTSEEEEEECCBSSHHHHHHHHHHHHHT--TCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC--
T ss_pred HHHHHHHhc---CCCcEEEEEEecCCHHHHHHHHHHHHHC--CCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhh
Confidence 687754321 111001111100011111 112222122 2222221 1110
Q ss_pred -------------C-----------CChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEE
Q psy3862 142 -------------G-----------YTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTT 197 (671)
Q Consensus 142 -------------G-----------~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t 197 (671)
+ .+....+.++++++..+ ..+++..+.+.+.++.++++|||+|++.+.+|..
T Consensus 211 ~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~-~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr~--- 286 (392)
T 2nzl_A 211 STLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTS-LPIVAKGILRGDDAREAVKHGLNGILVSNHGARQ--- 286 (392)
T ss_dssp ---------------CHHHHHHHHBCTTCCHHHHHHHC--CC-SCEEEEEECCHHHHHHHHHTTCCEEEECCGGGTS---
T ss_pred hhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhC-CCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCCc---
Confidence 0 11112233566555432 2344444578999999999999999997655521
Q ss_pred EecccCCcchhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 198 RLKNKTSDFFLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 198 ~v~~~~~~~~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.-...+++..+..+. .+| +.|||-+++.+..++++|||+|.||
T Consensus 287 -~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iG 336 (392)
T 2nzl_A 287 -LDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVG 336 (392)
T ss_dssp -STTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred -CCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEEC
Confidence 000012333333331 255 6999999999999999999999888
No 51
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=98.96 E-value=9.7e-10 Score=119.21 Aligned_cols=274 Identities=15% Similarity=0.186 Sum_probs=161.0
Q ss_pred cCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCC--C----CCHHHHHHHHHcCCeEEEccC--C
Q psy3862 294 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDT--V----GTFEMAKHLAKHGLFTTIHKY--Y 365 (671)
Q Consensus 294 ~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDt--V----~~~~mA~~la~~Gglgvihr~--~ 365 (671)
...||++.|+|..-. ..+++||+++|- ...+..||+-|||-. + ++..+|++..++|...++.-. +
T Consensus 41 ~~~f~~i~l~pr~L~--~~~~~d~st~i~-----G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~ 113 (380)
T 1p4c_A 41 RDVFQQWRFKPKRLV--DVSRRSLQAEVL-----GKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNM 113 (380)
T ss_dssp HHGGGGEEECCCCSC--CCSSCBCCEEET-----TEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECTTCSS
T ss_pred HHHHhheeeeccccC--CCccCcceeEEC-----CeecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCccccC
Confidence 456999999999754 558999999985 578899999999944 5 788899999999988888853 4
Q ss_pred CHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEE--cc---------cccccccc-ccccccc-------c
Q psy3862 366 TLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVML--GG---------MFAGHDQS-GGELTNI-------E 426 (671)
Q Consensus 366 ~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~i--d~---------~a~gh~~~-~~~~~~~-------~ 426 (671)
++|+..+. .+.+...+.....-...++-++++.++|++.++| |- ..+|++.. .+.+... +
T Consensus 114 ~le~i~~~-~~~~~~fQly~~~~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l 192 (380)
T 1p4c_A 114 SIEDLARQ-CDGDLWFQLYVIHREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKM 192 (380)
T ss_dssp CHHHHHHH-CCSCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCC
T ss_pred CHHHHHhc-cCCCeEEEEEechHHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhcc
Confidence 68886553 1112111110000011223445557789988887 41 11344211 1111100 0
Q ss_pred ------------c-ccccc-----ccccccccC-ceeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCcEEEeCC
Q psy3862 427 ------------Y-MFFPL-----VGDMNSYLG-GVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGELIEKDG 486 (671)
Q Consensus 427 ------------~-~~~~~-----~~~~~~~~~-~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g 486 (671)
. ..-|. +.++++.++ .+++.| +.+.+.++ ++++|||+|.|+. .+| . .
T Consensus 193 ~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkg-v~t~e~a~~a~~aGad~I~vs~-~gg-~----~------ 259 (380)
T 1p4c_A 193 DKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKG-LLSAEDADRCIAEGADGVILSN-HGG-R----Q------ 259 (380)
T ss_dssp SSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEE-ECCHHHHHHHHHTTCSEEEECC-GGG-T----S------
T ss_pred CcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEe-cCcHHHHHHHHHcCCCEEEEcC-CCC-C----c------
Confidence 0 00122 223444433 255666 46777777 6799999999985 333 1 1
Q ss_pred eEEEEeeCcccHHHHHhhccccccccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEecccc
Q psy3862 487 KKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQL 566 (671)
Q Consensus 487 ~~~k~g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~ 566 (671)
...|.+...++.++......-...+|+ |++..|+.|+++- |++ .|.+
T Consensus 260 ----~d~~~~~~~~l~~v~~~~~~pVia~GG---I~~~~dv~kal~~-------GAd---------------aV~i---- 306 (380)
T 1p4c_A 260 ----LDCAISPMEVLAQSVAKTGKPVLIDSG---FRRGSDIVKALAL-------GAE---------------AVLL---- 306 (380)
T ss_dssp ----CTTCCCGGGTHHHHHHHHCSCEEECSS---CCSHHHHHHHHHT-------TCS---------------CEEE----
T ss_pred ----CCCCcCHHHHHHHHHHHcCCeEEEECC---CCCHHHHHHHHHh-------CCc---------------Hhhe----
Confidence 123556666666554333222245553 6777799998872 232 1111
Q ss_pred cccccchhhhcccccccceeeccccccccccccccchhccccccccCCCceEecccccCHHHHHHHHHHHHhhhccccCc
Q psy3862 567 NNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGA 646 (671)
Q Consensus 567 ~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga 646 (671)
| +. .++|... .|. -.+++.+..+...|+..|.++|.
T Consensus 307 ------------G-r~--~l~~~~~----------------------~g~-------~~v~~~~~~l~~el~~~m~~~G~ 342 (380)
T 1p4c_A 307 ------------G-RA--TLYGLAA----------------------RGE-------TGVDEVLTLLKADIDRTLAQIGC 342 (380)
T ss_dssp ------------S-HH--HHHHHHH----------------------HHH-------HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ------------h-HH--HHHHHHh----------------------cCH-------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 00 1111100 010 13788899999999999999999
Q ss_pred ccccccccccEEEEecccccc
Q psy3862 647 SKLKELPRRATFIRCTAQLNN 667 (671)
Q Consensus 647 ~~l~el~~~a~Fvrvt~q~n~ 667 (671)
++++||++. +++++.++|.
T Consensus 343 ~~i~el~~~--~l~~~g~~~~ 361 (380)
T 1p4c_A 343 PDITSLSPD--YLQNEGVTNT 361 (380)
T ss_dssp CBGGGCCGG--GEEEC-----
T ss_pred CCHHHhccC--eEEecccccc
Confidence 999999885 5777777764
No 52
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.93 E-value=1.2e-09 Score=138.30 Aligned_cols=214 Identities=9% Similarity=0.085 Sum_probs=138.4
Q ss_pred cceeeeeeecccCCCcccCceEEecCCCc-cccHHHHHHHHHcCCeEEeec--CCCHHHHHHhhhcCcc-c--ccceEEe
Q psy3862 38 EVDITRTFTFRNSGKTYQGVPIIAANMDT-VGTFEMAKHLAKHGLFTTIHK--YYTLEEWKAFAVQNPD-V--IKHVAVS 111 (671)
Q Consensus 38 ~Vdlst~lt~r~~~~~~l~~Piv~a~M~~-vt~~~lA~Ala~~gglgvIh~--n~~~Eeq~~~i~~~p~-~--~~~~~v~ 111 (671)
.+-+.|+|| +-+. ..||+.++|++ ++..+|+.|++++||+|+|.. .+++|+..+.+++... + .++++++
T Consensus 576 ~~~~~t~~t----~llg-~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~t~~~~~~gvN 650 (2051)
T 2uv8_G 576 KIFVETKFS----KLIG-RPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIEKGSTFGIN 650 (2051)
T ss_dssp CEEEECHHH----HHHS-SCSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHHSCTTCCEEEE
T ss_pred chhHHHHHH----HhhC-ccceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHhcCCCCceEEE
Confidence 344566666 3344 48999999995 458999999999999999943 3778887777764432 2 2577776
Q ss_pred cCC-Chh----hHHHHHHHHHhCCCceE--EEeeccCCCC--hHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCC
Q psy3862 112 SGI-SAK----DLAGLKEILAALPEIEY--ICLDVANGYT--QTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGA 182 (671)
Q Consensus 112 ~G~-~~~----d~~rl~~l~~a~~~~d~--Ivld~a~G~~--~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGa 182 (671)
.-+ .+. +.+.++.+++. ++.+ +++ ..|++ +...+.++++ ..+......+.+.....+....++|+
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~--gv~i~~v~~--~ag~p~~~~~~~~i~~l--G~~vi~~~~~~~~a~~~~~~~~~~g~ 724 (2051)
T 2uv8_G 651 LIYVNPFMLQWGIPLIKELRSK--GYPIQFLTI--GAGVPSLEVASEYIETL--GLKYLGLKPGSIDAISQVINIAKAHP 724 (2051)
T ss_dssp EETTCTTHHHHHHHHHHHHHHT--TCSEEEEEE--ESSCCCHHHHHHHHHHS--CCSCEEECCCSHHHHHHHHHHHHHST
T ss_pred EeecChhhhhhhHHHHHHHHHc--CCCcceEEe--cCCCCchhhHHHHHHHc--CCEEEEecCchHHHHHHHHHHHHhCC
Confidence 433 222 23455666777 5555 544 34554 3344555543 11222222222334466677888899
Q ss_pred cE---EEECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHH-----------HcCCCEEEEc
Q psy3862 183 DV---IKVGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELI-----------LSGADVIKVG 241 (671)
Q Consensus 183 D~---IvVdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li-----------~aGAdgvkVG 241 (671)
|+ ++++| ++||.-...+. .+.+.+++.+. .+| +||||+|++++.++| .+|||||.||
T Consensus 725 d~~ii~~~~G~eaGGH~g~~d~~--~~~l~l~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~G 802 (2051)
T 2uv8_G 725 NFPIALQWTGGRGGGHHSFEDAH--TPMLQMYSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFG 802 (2051)
T ss_dssp TSCEEEEECCSSCSEECCSCCSS--HHHHHHHHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECS
T ss_pred CceeEEEEEccCcCCCCCccccc--ccHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeec
Confidence 99 47777 77874110000 01222344442 366 799999999999999 8999999999
Q ss_pred ccCCCccccceecccCcchhhhHHHHHHHhh
Q psy3862 242 IGPGSVCTTRLKTGVGYPQFSAVLECADAAH 272 (671)
Q Consensus 242 ~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~ 272 (671)
||.++.--.|--.++-+..-.|.
T Consensus 803 --------Trf~~t~Ea~~~~~~K~~iv~a~ 825 (2051)
T 2uv8_G 803 --------SRVMIAKEVKTSPDAKKCIAACT 825 (2051)
T ss_dssp --------GGGTTSTTSCCCHHHHHHHHTCC
T ss_pred --------hHHHhCcccccCHHHHHHHHhCC
Confidence 99999999887777777654444
No 53
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=98.92 E-value=2.9e-09 Score=115.04 Aligned_cols=268 Identities=18% Similarity=0.184 Sum_probs=158.7
Q ss_pred CCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHH------HHHHHHHcCCeEEEccC----
Q psy3862 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFE------MAKHLAKHGLFTTIHKY---- 364 (671)
Q Consensus 295 l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~------mA~~la~~Gglgvihr~---- 364 (671)
=+||||.|+|......++++|||+++|- .+.+..|++.+||-..+... +|..-.++|...++=-+
T Consensus 27 ~~~~~v~l~~~~lp~~~~~~vd~st~~~-----g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l 101 (368)
T 3vkj_A 27 TFLNDVILVHQGFPGISFSEINTKTKFF-----RKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAI 101 (368)
T ss_dssp CSGGGEEECCCSSCBSBGGGCBCCEEET-----TEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHH
T ss_pred CCcceEEEEcCCCCccCcccccceeEEC-----CEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhcc
Confidence 3699999999998888999999999985 67899999999998877654 57777777765553322
Q ss_pred CCHHHHHHH--Hhc-Ccccccceeeecc------cChhhHHHHHH-cCCcEEEEcc-cc------cccccc---cccccc
Q psy3862 365 YTLEEWKAF--AVQ-NPDVIKHVADGGC------TSPGDVAKAMG-AGADFVMLGG-MF------AGHDQS---GGELTN 424 (671)
Q Consensus 365 ~~~e~~~~~--v~~-~~~~~~~v~~~~~------~~~~~~~~l~~-aG~d~i~id~-~a------~gh~~~---~~~~~~ 424 (671)
.+++.+..+ +++ .|+. ..++..+. ...+...++++ +++|.+.|+= .. .||... .++.
T Consensus 102 ~~~~~~~s~~~vr~~ap~~-~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~-- 178 (368)
T 3vkj_A 102 EKAEARESFAIVRKVAPTI-PIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEK-- 178 (368)
T ss_dssp HCGGGSHHHHHHHHHCSSS-CEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHH--
T ss_pred CCHHHHhhHHHHHHhCcCc-ceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHH--
Confidence 134443443 443 4542 22222222 23455555543 4777777761 11 244322 2222
Q ss_pred ccccccccccccccccC-ceeec--cccCchhHHH-HHHcCCcEEEECccccCCccCCC-----cEEEeCC-----eEEE
Q psy3862 425 IEYMFFPLVGDMNSYLG-GVVDG--GCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGG-----ELIEKDG-----KKVK 490 (671)
Q Consensus 425 ~~~~~~~~~~~~~~~~~-~~i~g--G~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt-----~~v~~~g-----~~~k 490 (671)
+.++++.++ ++++- |+..+.+.++ +.++|||+|.|+. .+| . |.. |....+- ....
T Consensus 179 --------i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g-~GG-t-~~~~iE~~R~~~~~~~~~~~~~~~ 247 (368)
T 3vkj_A 179 --------LRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSG-QGG-T-NWIAIEMIRDIRRGNWKAESAKNF 247 (368)
T ss_dssp --------HHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCC-BTS-B-CHHHHHHHHHHHTTCTHHHHHHHT
T ss_pred --------HHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeC-CCC-C-cccchhhhhcccccccchhhcccc
Confidence 233333333 24442 2235777777 6799999999984 333 1 221 2100000 0001
Q ss_pred EeeCcccHHHHHhhccccccc-cccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEeccccccc
Q psy3862 491 LFYGMSSTTAMDKHAGGVAEY-RAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNV 569 (671)
Q Consensus 491 ~g~G~~q~tAi~~~a~~~~~y-~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~ 569 (671)
.++|.|++.++.++.....+. ..++|+ |+++.|+.||++- |++ .|.++..
T Consensus 248 ~~~g~pt~~~l~~v~~~~~~ipvia~GG---I~~~~d~~kal~l-------GA~---------------~v~ig~~---- 298 (368)
T 3vkj_A 248 LDWGVPTAASIMEVRYSVPDSFLVGSGG---IRSGLDAAKAIAL-------GAD---------------IAGMALP---- 298 (368)
T ss_dssp TTCSCBHHHHHHHHHHHSTTCEEEEESS---CCSHHHHHHHHHH-------TCS---------------EEEECHH----
T ss_pred ccccccHHHHHHHHHHHcCCCcEEEECC---CCCHHHHHHHHHc-------CCC---------------EEEEcHH----
Confidence 246889998888765544321 234443 7889999999983 332 2211000
Q ss_pred ccchhhhcccccccceeeccccccccccccccchhccccccccCCCceEecccccCHHHHHHHHHHHHhhhccccCcccc
Q psy3862 570 NDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKL 649 (671)
Q Consensus 570 ~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l 649 (671)
++.+ +-+| ...+.+++..+...||..|.++|++++
T Consensus 299 ------~l~~--------------------------------~~~G-------~~~v~~~l~~l~~eL~~~m~~~G~~~i 333 (368)
T 3vkj_A 299 ------VLKS--------------------------------AIEG-------KESLEQFFRKIIFELKAAMMLTGSKDV 333 (368)
T ss_dssp ------HHHH--------------------------------HHHC-------HHHHHHHHHHHHHHHHHHHHHTTCCBH
T ss_pred ------HHHH--------------------------------HhcC-------hHHHHHHHHHHHHHHHHHHHHhCCCCH
Confidence 0000 0011 124678889999999999999999999
Q ss_pred cccccc
Q psy3862 650 KELPRR 655 (671)
Q Consensus 650 ~el~~~ 655 (671)
+||++.
T Consensus 334 ~el~~~ 339 (368)
T 3vkj_A 334 DALKKT 339 (368)
T ss_dssp HHHHTC
T ss_pred HHhccC
Confidence 999853
No 54
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=98.85 E-value=8e-09 Score=126.42 Aligned_cols=214 Identities=14% Similarity=0.163 Sum_probs=132.5
Q ss_pred ccCCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccc-c----HHHHHHHHHcCCeEEeecC-C
Q psy3862 16 DIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG-T----FEMAKHLAKHGLFTTIHKY-Y 89 (671)
Q Consensus 16 ~~~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt-~----~~lA~Ala~~gglgvIh~n-~ 89 (671)
....+|+|+++.+..++.+|.++||+.+. +..||++++|+++. . ..||.|+++.|+++.+..+ +
T Consensus 837 ~~~~~~r~l~~~~~~~~~i~~~ev~~~~~----------I~~Pfii~aMS~GslS~ea~~aLA~Aas~aGg~~~tGeGg~ 906 (1520)
T 1ofd_A 837 RPVTALRDLLDFNADQPAISLEEVESVES----------IVKRFCTGGMSLGALSREAHETLAIAMNRLGAKSNSGEGGE 906 (1520)
T ss_dssp CCSCSGGGGEEECCSSCCCCGGGSCCHHH----------HHTTEECCCBCTTTSCHHHHHHHHHHHHHHTCBCEECTTCC
T ss_pred CCCcchhhhccccCCCCCCCchhhccccc----------ccCceEecCcCcccccHHHHHHHHHHHHHcCCceEeCCCCC
Confidence 45679999999998877777788886554 46799999999763 2 4799999999999988765 4
Q ss_pred CHHHHHHhhh--------cCcc------------cccceEEec---CCChhh---------------------------H
Q psy3862 90 TLEEWKAFAV--------QNPD------------VIKHVAVSS---GISAKD---------------------------L 119 (671)
Q Consensus 90 ~~Eeq~~~i~--------~~p~------------~~~~~~v~~---G~~~~d---------------------------~ 119 (671)
++|+...+++ ..|. .+++ ++. |++... +
T Consensus 907 ~pe~~~~eir~~~~~~~~~~p~~~~~~nG~~~~~~I~Q--l~sg~FGVn~~~l~~ad~IeIKi~QGAKpG~GG~Lp~~kV 984 (1520)
T 1ofd_A 907 DVVRYLTLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQ--IASGRFGVTPEYLMSGKQLEIKMAQGAKPGEGGQLPGKKV 984 (1520)
T ss_dssp CGGGGSCCCCCCTTSCCTTSTTCCSCCTTCCCCCSEEE--ECTTCTTCCHHHHHHCSEEEEECCCTTSTTSCCEECGGGC
T ss_pred CHHHHHhhhccccccccccccccccccCcchHHHHHHH--hcCCCCccChhhccchHHHHHHHhccCCCCCCCCCCHHHH
Confidence 4544210010 0010 0111 111 122111 0
Q ss_pred -HHHHHHHHhCCCceEEEeeccCC--CChHHHHHHHHHHHhCCC---ceEEEEEeccHHHHHHHHHCCCcEEEECcC-CC
Q psy3862 120 -AGLKEILAALPEIEYICLDVANG--YTQTFVDFVRRIREMYPK---HVIIAGNVVTGEMVEELILSGADVIKVGIG-PG 192 (671)
Q Consensus 120 -~rl~~l~~a~~~~d~Ivld~a~G--~~~~~~~~ik~lr~~~P~---~~li~g~v~t~e~a~~Li~AGaD~IvVdga-~G 192 (671)
+....+....|+.+.+.....+. .++.+.+.++++|+..|. ..+++++....+.|+.+.++|||+|++++. +|
T Consensus 985 ~~~iA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGG 1064 (1520)
T 1ofd_A 985 SEYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGG 1064 (1520)
T ss_dssp CHHHHHHHTSCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCC
T ss_pred HHHHHHHcCCCCCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCc
Confidence 11122222334555443321111 125567888888887644 445555544567888999999999999996 45
Q ss_pred ceEEEE--ecc-cCCcchhhhhcc----------ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 193 SVCTTR--LKN-KTSDFFLIQFYS----------CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 193 ~~~~t~--v~~-~~~~~~~i~~i~----------~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
|..... +.. -.|....+..+. .+| ++|||.|++.+..++.+|||+|.+|
T Consensus 1065 Tgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iG 1128 (1520)
T 1ofd_A 1065 TGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFG 1128 (1520)
T ss_dssp CSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECS
T ss_pred cCCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEc
Confidence 532221 110 123333333331 255 7999999999999999999999999
No 55
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=98.81 E-value=1.2e-07 Score=101.72 Aligned_cols=206 Identities=20% Similarity=0.157 Sum_probs=128.0
Q ss_pred CCCCCceEEecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccc------cHHHHHHHHHcCCeEEeec--CC
Q psy3862 18 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG------TFEMAKHLAKHGLFTTIHK--YY 89 (671)
Q Consensus 18 ~l~fdDv~lvP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt------~~~lA~Ala~~gglgvIh~--n~ 89 (671)
.-.|+++.|.|..+... +++||+|+| -+.++..||+.+|+.... +..+|.+.++.|-.-++-. ++
T Consensus 38 ~~af~~~~l~prvl~dv--~~~d~~t~l-----lG~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~lSt~ss~ 110 (352)
T 3sgz_A 38 IAAFKRIRLRPRYLRDM--SKVDTRTTI-----QGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASY 110 (352)
T ss_dssp HHHHHTCCBCCCCSSCC--SSCBCCEEE-----TTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEECTTCSS
T ss_pred HHHHHhceeeccccCCC--CCCCCceEE-----CCcccCCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEeCCCCCC
Confidence 45789999999998764 689999999 489999999999988632 4568888888877666653 48
Q ss_pred CHHHHHHhhhcCcccccceEEecCCChhhHHHH----HHHHHhCCCceEEEeeccC-CC---------------------
Q psy3862 90 TLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGL----KEILAALPEIEYICLDVAN-GY--------------------- 143 (671)
Q Consensus 90 ~~Eeq~~~i~~~p~~~~~~~v~~G~~~~d~~rl----~~l~~a~~~~d~Ivld~a~-G~--------------------- 143 (671)
++||..+.. |+...-+++- .. .|.+.. +..-.+.-..-++++|... |.
T Consensus 111 s~e~v~~~~---~~~~~wfQlY--~~-~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~ 184 (352)
T 3sgz_A 111 SLEDIVAAA---PEGFRWFQLY--MK-SDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALR 184 (352)
T ss_dssp CHHHHHHHS---TTCEEEEECC--CC-SCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC-
T ss_pred CHHHHHHhc---cCccceeccc--cC-CCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhc
Confidence 888865432 2111111111 00 122111 1111221122233444321 11
Q ss_pred -----------------ChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcc
Q psy3862 144 -----------------TQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDF 206 (671)
Q Consensus 144 -----------------~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~ 206 (671)
+...-+.++++++..+ .++++..+.+.+.++.++++|||.|++.+.+|+... ...+++
T Consensus 185 ~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~-~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~~d----~~~~~~ 259 (352)
T 3sgz_A 185 ALKEEKPTQSVPVLFPKASFCWNDLSLLQSITR-LPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLD----EVSASI 259 (352)
T ss_dssp --------------CCCTTCCHHHHHHHHHHCC-SCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSSC----SSCCHH
T ss_pred ccccccccchhhhhccCCCCCHHHHHHHHHhcC-CCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCCccC----CCccHH
Confidence 1111234666666542 234444457899999999999999999886664210 011233
Q ss_pred hhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 207 FLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 207 ~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+..+. .+| +.|||-+++.+..++++|||+|.||
T Consensus 260 ~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 260 DALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLG 301 (352)
T ss_dssp HHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3333331 355 7999999999999999999999998
No 56
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.70 E-value=1.2e-08 Score=133.54 Aligned_cols=212 Identities=17% Similarity=0.134 Sum_probs=134.3
Q ss_pred CcceeeeeeecccCCCcccCceEEecCCCccc-cHHHHHHHHHcCCeEEee-cCC-CHHHHHHhhhcCcc-c--ccceEE
Q psy3862 37 SEVDITRTFTFRNSGKTYQGVPIIAANMDTVG-TFEMAKHLAKHGLFTTIH-KYY-TLEEWKAFAVQNPD-V--IKHVAV 110 (671)
Q Consensus 37 ~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt-~~~lA~Ala~~gglgvIh-~n~-~~Eeq~~~i~~~p~-~--~~~~~v 110 (671)
..+-+.+.|+ +-+. +.|||.++|.+++ ..+||.|++++||+|+|. .++ ++|...+.+.+... + ..++.+
T Consensus 413 g~~~~~t~~~----~~lg-~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~~~~~~~p~~v 487 (3089)
T 3zen_D 413 GSVKLETKFT----RLTG-RSPILLAGMTPTTVDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIAELETLLEPGRAIQF 487 (3089)
T ss_dssp CCEEEECHHH----HHHS-SCSEEECCCHHHHTSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHHHSCTTCCCEE
T ss_pred Ccccccchhh----hhcC-CCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHHhcCCCCceee
Confidence 4455677776 3444 8899999999765 899999999999999994 455 78766555543211 1 235666
Q ss_pred ecCC-Chhh----H---HHHHHHHHhCCCceEEEeeccCCCC--hHHHHHHHHHHHhCCCceEEEE-EeccHHHHHHHHH
Q psy3862 111 SSGI-SAKD----L---AGLKEILAALPEIEYICLDVANGYT--QTFVDFVRRIREMYPKHVIIAG-NVVTGEMVEELIL 179 (671)
Q Consensus 111 ~~G~-~~~d----~---~rl~~l~~a~~~~d~Ivld~a~G~~--~~~~~~ik~lr~~~P~~~li~g-~v~t~e~a~~Li~ 179 (671)
+... .+.. + +.++.++++.+-++.+++- .|.+ +...+.++.+++. +..+.. .+.+.+.++++.+
T Consensus 488 Nl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~--aG~P~~ee~~~~i~~l~~~---Gi~~i~~~~~t~~~a~~~~~ 562 (3089)
T 3zen_D 488 NTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVS--AGIPDLEEAVDIIDELNEV---GISHVVFKPGTVEQIRSVIR 562 (3089)
T ss_dssp EEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEE--SSCCCHHHHHHHHTSTTHH---HHCSEEECCCSHHHHHHHHH
T ss_pred chhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEe--CCCCchhHhHHHHHHHHHc---CCEEEEEeCCCHHHHHHHHH
Confidence 5442 3322 1 3456667774335556653 2555 2223334333322 122223 4567788888999
Q ss_pred CCCc------EEEECc--CCCceEEEEecccCCcchhh----hhcc---ccC--CccccccHHHHHHHH-----------
Q psy3862 180 SGAD------VIKVGI--GPGSVCTTRLKNKTSDFFLI----QFYS---CIP--QAGNVVTGEMVEELI----------- 231 (671)
Q Consensus 180 AGaD------~IvVdg--a~G~~~~t~v~~~~~~~~~i----~~i~---~~p--~aGnV~t~~~a~~li----------- 231 (671)
+|+| +|++.| ++||.-...+ ..++ +.+. .+| +||||.|++++++++
T Consensus 563 i~~d~~~~~y~vv~~G~eaGGH~g~~~~------~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p 636 (3089)
T 3zen_D 563 IAAEVPTKPVIVHIEGGRAGGHHSWEDL------DDLLLATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYP 636 (3089)
T ss_dssp HHTTSTTSCEEEEECCSSSSEECCSCCH------HHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCC
T ss_pred hhhhcCCCcEEEEEeCCCcCCCCCcccH------HHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCcc
Confidence 9999 899988 6777411111 1122 2222 356 799999999999999
Q ss_pred HcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhh
Q psy3862 232 LSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAH 272 (671)
Q Consensus 232 ~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~ 272 (671)
.+|||||.|| ||.++..-.+.-.+.-+.--.+.
T Consensus 637 ~lGAdGV~vG--------Trfl~t~Ea~~s~~~K~~l~~a~ 669 (3089)
T 3zen_D 637 LMPIDGILVG--------TAAMATLEATTSPQVKQLLVETK 669 (3089)
T ss_dssp CCCCSEEECS--------STTTTCTTSCBCHHHHHHHHHCC
T ss_pred CCCCCEEEec--------HHHHhCcccCCCHHHHHHHHhCC
Confidence 9999999999 99988876654334444433333
No 57
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=98.69 E-value=3.6e-08 Score=106.44 Aligned_cols=256 Identities=16% Similarity=0.152 Sum_probs=156.6
Q ss_pred CCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCC--CCC----CHHHHHHHHHcCCeEEEccCC--C
Q psy3862 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMD--TVG----TFEMAKHLAKHGLFTTIHKYY--T 366 (671)
Q Consensus 295 l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MD--tV~----~~~mA~~la~~Gglgvihr~~--~ 366 (671)
-.||++.|+|..-. ..+++||+++|- ...+..||+-|||- .++ +..+|++-+++|...++.-+. +
T Consensus 50 ~~f~~i~l~pr~L~--~~~~~d~st~i~-----G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~ 122 (368)
T 2nli_A 50 RAWKHKLLYPRLAQ--DVEAPDTSTEIL-----GHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGAT 122 (368)
T ss_dssp HGGGGEEECCCCCC--CCSCCCCCEEET-----TEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCSSC
T ss_pred HHHhheeeeccccC--CCccCCcceEEC-----CEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHhHH
Confidence 46999999999865 568999999985 57789999999998 555 468999999999999888554 6
Q ss_pred HHHHHHHHhcCcccccceeeecccCh----hhHHHHHHcCCcEEEEccccc---cccc--------ccc---cc------
Q psy3862 367 LEEWKAFAVQNPDVIKHVADGGCTSP----GDVAKAMGAGADFVMLGGMFA---GHDQ--------SGG---EL------ 422 (671)
Q Consensus 367 ~e~~~~~v~~~~~~~~~v~~~~~~~~----~~~~~l~~aG~d~i~id~~a~---gh~~--------~~~---~~------ 422 (671)
+|+..+...+.|-..+ +. +...+ +.+.+..++|++.|+|. ..+ |.-+ .++ ++
T Consensus 123 le~v~~~~~~~~~~~Q-Ly--~~~d~~~~~~~~~ra~~aG~~ai~it-~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~ 198 (368)
T 2nli_A 123 FEEISEGLNGGPRWFQ-IY--MAKDDQQNRDILDEAKSDGATAIILT-ADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRG 198 (368)
T ss_dssp HHHHHHHHTTCCEEEE-EC--CBSSHHHHHHHHHHHHHTTCSCEEEE-SBCC---CBC--------CCSCCHHHHHHHTT
T ss_pred HHHHHHhCCCCCEEEE-Ee--ccCCHHHHHHHHHHHHHCCCCEEEEc-CCCCcccchhHHHhhcccCcchhhhhhccccc
Confidence 8876553322111111 10 01112 22333456899999876 322 1100 000 00
Q ss_pred ------cc------ccccccccccccccccC-ceeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCcEEEeCCeE
Q psy3862 423 ------TN------IEYMFFPLVGDMNSYLG-GVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGELIEKDGKK 488 (671)
Q Consensus 423 ------~~------~~~~~~~~~~~~~~~~~-~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~ 488 (671)
+. ........++++++.++ .+++-|+ .+.+.++ +.++|||+|.|.. .|. |.
T Consensus 199 ~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v-~~~e~a~~a~~~Gad~I~vs~--~gg-----r~------- 263 (368)
T 2nli_A 199 TAEGMSLNNIYGASKQKISPRDIEEIAGHSGLPVFVKGI-QHPEDADMAIKRGASGIWVSN--HGA-----RQ------- 263 (368)
T ss_dssp SGGGC-----CTTBCSBCCHHHHHHHHHHSSSCEEEEEE-CSHHHHHHHHHTTCSEEEECC--GGG-----TS-------
T ss_pred CCCCchHHhhhhccCchhhHHHHHHHHHHcCCCEEEEcC-CCHHHHHHHHHcCCCEEEEcC--CCc-----CC-------
Confidence 00 00111112444555443 3666664 6667777 6799999999974 331 11
Q ss_pred EEEeeCcccHHHHHhhccccc-c-ccccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCcccccccCCcceEEE
Q psy3862 489 VKLFYGMSSTTAMDKHAGGVA-E-YRAAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGASKLKELPRRATFIR 561 (671)
Q Consensus 489 ~k~g~G~~q~tAi~~~a~~~~-~-y~~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~~i~e~~~~a~fv~ 561 (671)
...|.+...++.++..+.. + -...+|+ |++..|+.|+|+ ||+|+++-
T Consensus 264 --~~~g~~~~~~l~~v~~~v~~~ipVia~GG---I~~g~D~~kalalGAd~V~iGr~~l--------------------- 317 (368)
T 2nli_A 264 --LYEAPGSFDTLPAIAERVNKRVPIVFDSG---VRRGEHVAKALASGADVVALGRPVL--------------------- 317 (368)
T ss_dssp --CSSCCCHHHHHHHHHHHHTTSSCEEECSS---CCSHHHHHHHHHTTCSEEEECHHHH---------------------
T ss_pred --CCCCCChHHHHHHHHHHhCCCCeEEEECC---CCCHHHHHHHHHcCCCEEEECHHHH---------------------
Confidence 2357778777776544332 1 0134443 788999999998 33333221
Q ss_pred ecccccccccchhhhcccccccceeeccccccccccccccchhccccccccCCCceEecccccCHHHHHHHHHHHHhhhc
Q psy3862 562 CTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSAC 641 (671)
Q Consensus 562 ~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m 641 (671)
|+... .|. -.+++++..+...|+..|
T Consensus 318 -------------------------~~~~~----------------------~G~-------~gv~~~l~~l~~el~~~m 343 (368)
T 2nli_A 318 -------------------------FGLAL----------------------GGW-------QGAYSVLDYFQKDLTRVM 343 (368)
T ss_dssp -------------------------HHHHH----------------------HHH-------HHHHHHHHHHHHHHHHHH
T ss_pred -------------------------HHHHh----------------------cCh-------HHHHHHHHHHHHHHHHHH
Confidence 11000 011 136788999999999999
Q ss_pred cccCccccccccccc
Q psy3862 642 TYVGASKLKELPRRA 656 (671)
Q Consensus 642 ~y~Ga~~l~el~~~a 656 (671)
.++|.++++||++..
T Consensus 344 ~~~G~~~i~~l~~~~ 358 (368)
T 2nli_A 344 QLTGSQNVEDLKGLD 358 (368)
T ss_dssp HHHTCSSHHHHHTCC
T ss_pred HHhCCcCHHHhcccc
Confidence 999999999998743
No 58
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=98.68 E-value=4.9e-08 Score=104.33 Aligned_cols=278 Identities=17% Similarity=0.172 Sum_probs=148.4
Q ss_pred cCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCC-------CHHHHHHHHHcCCeEEEccC--
Q psy3862 294 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG-------TFEMAKHLAKHGLFTTIHKY-- 364 (671)
Q Consensus 294 ~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~-------~~~mA~~la~~Gglgvihr~-- 364 (671)
...|||+.|+|..-.-...+++||+++|- ...+..|++-|||..++ +..+|.+..++|..-.+--+
T Consensus 22 ~~~f~~~~l~p~~l~~~~~~~~d~~~~i~-----g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~ 96 (349)
T 1p0k_A 22 ETGLDDITFVHVSLPDLALEQVDISTKIG-----ELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMS 96 (349)
T ss_dssp CCSGGGEEECCCSCCCCCGGGCBCCEEET-----TEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTT
T ss_pred cCccceEEEEccccCCCCcccCCceeEEC-----CcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchh
Confidence 56899999999974322337899999984 56789999999998888 77899998887744333332
Q ss_pred --CCH--HHHHHHHhc-Ccccccceeeec-ccChhhHHHHH-HcCCcEEEEcccccccc--ccccccccccccccccccc
Q psy3862 365 --YTL--EEWKAFAVQ-NPDVIKHVADGG-CTSPGDVAKAM-GAGADFVMLGGMFAGHD--QSGGELTNIEYMFFPLVGD 435 (671)
Q Consensus 365 --~~~--e~~~~~v~~-~~~~~~~v~~~~-~~~~~~~~~l~-~aG~d~i~id~~a~gh~--~~~~~~~~~~~~~~~~~~~ 435 (671)
.++ +.|.+.+++ .++ .+.+.... +.+++++.+++ ++|+|.|.|. ..+-+. ....+. .....+..+.+
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~-~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~-~~~~~~~~~~~~~~--~~~~~~~~i~~ 172 (349)
T 1p0k_A 97 ALKDPSERLSYEIVRKENPN-GLIFANLGSEATAAQAKEAVEMIGANALQIH-LNVIQEIVMPEGDR--SFSGALKRIEQ 172 (349)
T ss_dssp TTTCHHHHHHHHHHHHHCSS-SCEEEEEETTCCHHHHHHHHHHTTCSEEEEE-ECTTTTC----------CTTHHHHHHH
T ss_pred cccCcccccceehhhhhCCC-ceeEEeecCCCCHHHHHHHHHhcCCCeEEec-ccchhhhcCCCCCc--chHHHHHHHHH
Confidence 122 234444443 222 12222222 34456666654 5799999887 332110 000000 00000112333
Q ss_pred cccccC-ceee-c-cccCchhHHH-HHHcCCcEEEECccccCCccC---CCcEEEeCCeEEEEeeCcccHHHHHhhcccc
Q psy3862 436 MNSYLG-GVVD-G-GCTSPGDVAK-AMGAGADFVMLGGMFAGHDQS---GGELIEKDGKKVKLFYGMSSTTAMDKHAGGV 508 (671)
Q Consensus 436 ~~~~~~-~~i~-g-G~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~c---tt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~ 508 (671)
+++.++ .++. + |+..+.+.++ +.++|||+|.|.. -.|+... ..+.. .+.......|.+...++.++....
T Consensus 173 vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~-~ggt~~~~~e~~r~~--~~~~~~~~~g~~~~~~l~~v~~~~ 249 (349)
T 1p0k_A 173 ICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGG-YGGTNFSKIENLRRQ--RQISFFNSWGISTAASLAEIRSEF 249 (349)
T ss_dssp HHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC------------------CCGGGGTTCSCCHHHHHHHHHHHC
T ss_pred HHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcC-CCCcchhhHHHhhcc--cchhhhhccCccHHHHHHHHHHhc
Confidence 343332 2222 2 3445667777 5799999999963 1221111 11110 000000245667777777654322
Q ss_pred ccc-cccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEecccccccccchhhhcccccccceee
Q psy3862 509 AEY-RAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDILGGLRSACTYV 587 (671)
Q Consensus 509 ~~y-~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~ 587 (671)
.+. ...+|+ |.+.-|+.|+++. |++ .|.++.. ++ +
T Consensus 250 ~~ipvia~GG---I~~~~d~~k~l~~-------GAd---------------~V~iG~~----------~l---------~ 285 (349)
T 1p0k_A 250 PASTMIASGG---LQDALDVAKAIAL-------GAS---------------CTGMAGH----------FL---------K 285 (349)
T ss_dssp TTSEEEEESS---CCSHHHHHHHHHT-------TCS---------------EEEECHH----------HH---------H
T ss_pred CCCeEEEECC---CCCHHHHHHHHHc-------CCC---------------EEEEcHH----------HH---------H
Confidence 110 122332 6777888887762 332 2211000 00 0
Q ss_pred ccccccccccccccchhccccccccCCCceEecccccCHHHHHHHHHHHHhhhccccCccccccccccc
Q psy3862 588 GASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRA 656 (671)
Q Consensus 588 Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~el~~~a 656 (671)
... ..| ...+.+.+..+...|+..|.+.|..+++||++..
T Consensus 286 ~~~----------------------~~g-------~~~~~~~~~~~~~~l~~~m~~~G~~~i~el~~~~ 325 (349)
T 1p0k_A 286 ALT----------------------DSG-------EEGLLEEIQLILEELKLIMTVLGARTIADLQKAP 325 (349)
T ss_dssp HHH----------------------HHH-------HHHHHHHHHHHHHHHHHHHHHHTCCBHHHHTTCC
T ss_pred HHh----------------------hcC-------HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhCC
Confidence 000 001 0136788899999999999999999999998754
No 59
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=98.66 E-value=4.6e-08 Score=105.67 Aligned_cols=261 Identities=16% Similarity=0.171 Sum_probs=152.4
Q ss_pred CCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHH-------HHHHHHHcCCeEEEc--cCC
Q psy3862 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFE-------MAKHLAKHGLFTTIH--KYY 365 (671)
Q Consensus 295 l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~-------mA~~la~~Gglgvih--r~~ 365 (671)
-.||++.|+|..-. ..+++||+++|- ...+..||+-||| .++..- +|++-+++|...++. ..+
T Consensus 41 ~~f~~i~l~pr~l~--~~~~~d~~t~i~-----G~~~~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~ 112 (370)
T 1gox_A 41 NAFSRILFRPRILI--DVTNIDMTTTIL-----GFKISMPIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTLSSWATS 112 (370)
T ss_dssp HGGGGEEECCCCSC--CCSCCBCCEEET-----TEEESSSEEECCC-SCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSS
T ss_pred HHHhhheeeccccC--CCCCCCCceEEC-----CcccCCceeEccc-chhhhccchHHHHHHHHHHHcCCCeeccCCCCC
Confidence 46999999996543 458999999984 4678899999999 666544 999999999999997 456
Q ss_pred CHHHHHHHHhcCcccccceeeecccChh----hHHHHHHcCCcEEEEccccc---cc---------ccc-cc---ccccc
Q psy3862 366 TLEEWKAFAVQNPDVIKHVADGGCTSPG----DVAKAMGAGADFVMLGGMFA---GH---------DQS-GG---ELTNI 425 (671)
Q Consensus 366 ~~e~~~~~v~~~~~~~~~v~~~~~~~~~----~~~~l~~aG~d~i~id~~a~---gh---------~~~-~~---~~~~~ 425 (671)
++|++.+... .+..++ +. ....++ -+.++.++|++.|+|. +.. |. ... .+ +++..
T Consensus 113 ~ieev~~~~~-~~~~~Q-Ly--~~~d~~~~~~~~~~a~~~G~~ai~it-~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~ 187 (370)
T 1gox_A 113 SVEEVASTGP-GIRFFQ-LY--VYKDRNVVAQLVRRAERAGFKAIALT-VDTPRLGRREADIKNRFVLPPFLTLKNFEGI 187 (370)
T ss_dssp CHHHHHTTCC-CCEEEE-EC--CBSSHHHHHHHHHHHHHTTCCEEEEE-CSCSSCCCCHHHHHTTCCCCTTCCCGGGSSS
T ss_pred CHHHHHhhcC-CCceEE-Ee--cCCCchHHHHHHHHHHHCCCCEEEEe-CCCCcccccHHHHHhccCCCcccchhhhhhh
Confidence 6777654211 111011 00 111222 2233456899999886 221 11 000 00 11100
Q ss_pred ----------------------cccccccccccccccCc-eeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCcE
Q psy3862 426 ----------------------EYMFFPLVGDMNSYLGG-VVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGEL 481 (671)
Q Consensus 426 ----------------------~~~~~~~~~~~~~~~~~-~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~ 481 (671)
.......+.++++.++- ++..+. .+.+.++ ++++|||+|.|+. ..| +.
T Consensus 188 ~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~-~~~e~a~~a~~~Gad~I~vs~-~gg------r~ 259 (370)
T 1gox_A 188 DLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGV-ITAEDARLAVQHGAAGIIVSN-HGA------RQ 259 (370)
T ss_dssp CCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECC-CSHHHHHHHHHTTCSEEEECC-GGG------TS
T ss_pred hhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEec-CCHHHHHHHHHcCCCEEEECC-CCC------cc
Confidence 00011123334444432 555564 5666666 6799999999985 222 11
Q ss_pred EEeCCeEEEEeeCcccHHHHHhhccccc-c-ccccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceE
Q psy3862 482 IEKDGKKVKLFYGMSSTTAMDKHAGGVA-E-YRAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATF 559 (671)
Q Consensus 482 v~~~g~~~k~g~G~~q~tAi~~~a~~~~-~-y~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~f 559 (671)
...+.+...++.++..... + -...+|+ |++..|+.|+++- |++ .
T Consensus 260 ---------~~~~~~~~~~l~~v~~~~~~~ipvia~GG---I~~~~D~~k~l~~-------GAd---------------a 305 (370)
T 1gox_A 260 ---------LDYVPATIMALEEVVKAAQGRIPVFLDGG---VRRGTDVFKALAL-------GAA---------------G 305 (370)
T ss_dssp ---------STTCCCHHHHHHHHHHHTTTSSCEEEESS---CCSHHHHHHHHHH-------TCS---------------E
T ss_pred ---------CCCcccHHHHHHHHHHHhCCCCEEEEECC---CCCHHHHHHHHHc-------CCC---------------E
Confidence 1124567777776544331 1 0123332 6777799998873 332 2
Q ss_pred EEecccccccccchhhhcccccccceeeccccccccccccccchhccccccccCCCceEecccccCHHHHHHHHHHHHhh
Q psy3862 560 IRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRS 639 (671)
Q Consensus 560 v~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs 639 (671)
|.++. . ++|++.. .|. -.+++++..+...|+.
T Consensus 306 V~iGr-----------------~--~l~~~~~----------------------~G~-------~gv~~~~~~l~~el~~ 337 (370)
T 1gox_A 306 VFIGR-----------------P--VVFSLAA----------------------EGE-------AGVKKVLQMMRDEFEL 337 (370)
T ss_dssp EEECH-----------------H--HHHHHHH----------------------HHH-------HHHHHHHHHHHHHHHH
T ss_pred EeecH-----------------H--HHHHHhh----------------------ccH-------HHHHHHHHHHHHHHHH
Confidence 21100 0 1121110 010 1277889999999999
Q ss_pred hccccCcccccccccccEE
Q psy3862 640 ACTYVGASKLKELPRRATF 658 (671)
Q Consensus 640 ~m~y~Ga~~l~el~~~a~F 658 (671)
.|.++|.++++||++..-.
T Consensus 338 ~m~~~G~~~i~el~~~~l~ 356 (370)
T 1gox_A 338 TMALSGCRSLKEISRSHIA 356 (370)
T ss_dssp HHHHHTCSBTTTCCGGGEE
T ss_pred HHHHhCCCCHHHhhhccee
Confidence 9999999999999886543
No 60
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.64 E-value=1.7e-08 Score=128.40 Aligned_cols=61 Identities=11% Similarity=0.154 Sum_probs=52.6
Q ss_pred CCcccceeeeeeccCCceeeCcceEecCCC-CCCCHHHHHHHHHcCCeEEE--ccCCCHHHHHHHHhcC
Q psy3862 312 RSEVDITRTFTFRNSGKTYQGVPIIAANMD-TVGTFEMAKHLAKHGLFTTI--HKYYTLEEWKAFAVQN 377 (671)
Q Consensus 312 r~eVdl~~~l~~~~s~~~~~~iPiIaa~MD-tV~~~~mA~~la~~Gglgvi--hr~~~~e~~~~~v~~~ 377 (671)
-.+++++++|+. .+. ..|||+++|+ ||++++||+++++.||+|+| |.++++|++.+++++.
T Consensus 567 ~~~~~l~t~~t~----~lg-~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~v 630 (2060)
T 2uva_G 567 VGQTFVDTKMSR----LLG-VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKI 630 (2060)
T ss_dssp TCCEEEECHHHH----HHT-SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHH
T ss_pred CCceecchhhhh----ccc-cceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHH
Confidence 367788888872 222 6999999999 99999999999999999999 9999999998888754
No 61
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=98.61 E-value=4.9e-08 Score=106.26 Aligned_cols=261 Identities=15% Similarity=0.148 Sum_probs=153.6
Q ss_pred CCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCC-------HHHHHHHHHcCCeEEEccC--C
Q psy3862 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGT-------FEMAKHLAKHGLFTTIHKY--Y 365 (671)
Q Consensus 295 l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~-------~~mA~~la~~Gglgvihr~--~ 365 (671)
-.||++.|+|..-. ..+++||+++|- ...+..||+-||| .++. -.+|++-+++|...++--+ +
T Consensus 64 ~~f~~i~l~pr~L~--~~~~~d~st~i~-----G~~l~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~ 135 (392)
T 2nzl_A 64 AAFSRWKLYPRMLR--NVAETDLSTSVL-----GQRVSMPICVGAT-AMQRMAHVDGELATVRACQSLGTGMMLSSWATS 135 (392)
T ss_dssp HHHHHSCBCCCCSS--CCTTCBCCEEET-----TEEESSSEEECCC-SCGGGTSTTHHHHHHHHHHHHTCEEEECTTCSS
T ss_pred HhhheEEeehhhcc--CCcCCCcceEEC-----CEecCCceEeccc-cccccccchHHHHHHHHHHHcCCCeeccchHHH
Confidence 46999999999854 458999999985 5778999999999 4444 3599999999999998855 4
Q ss_pred CHHHHHHHHhcCcccccceeeecccCh----hhHHHHHHcCCcEEEEcc-c-ccc--------------cc--cccc-c-
Q psy3862 366 TLEEWKAFAVQNPDVIKHVADGGCTSP----GDVAKAMGAGADFVMLGG-M-FAG--------------HD--QSGG-E- 421 (671)
Q Consensus 366 ~~e~~~~~v~~~~~~~~~v~~~~~~~~----~~~~~l~~aG~d~i~id~-~-a~g--------------h~--~~~~-~- 421 (671)
++|+..+...+.|-..+ +- +...+ +.+.+..++|++.|+|.- . ..| |. .+.. +
T Consensus 136 ~le~v~~~~~~~~~~~Q-Ly--~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~ 212 (392)
T 2nzl_A 136 SIEEVAEAGPEALRWLQ-LY--IYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETST 212 (392)
T ss_dssp CHHHHHHHCTTSEEEEE-EC--CBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC----
T ss_pred HHHHHHHhcCCCcEEEE-EE--ecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhh
Confidence 68886543211111001 10 01112 223334568999988741 1 111 11 0000 0
Q ss_pred -----------------ccc---ccccccccccccccccC-ceeeccccCchhHHH-HHHcCCcEEEECccccCCccCCC
Q psy3862 422 -----------------LTN---IEYMFFPLVGDMNSYLG-GVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGG 479 (671)
Q Consensus 422 -----------------~~~---~~~~~~~~~~~~~~~~~-~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt 479 (671)
++. ........++++++.++ .+++.|+ .+.+.++ +.++|||+|.|+. .|..
T Consensus 213 ~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv-~~~e~A~~a~~aGad~I~vs~--~ggr---- 285 (392)
T 2nzl_A 213 LSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGI-LRGDDAREAVKHGLNGILVSN--HGAR---- 285 (392)
T ss_dssp -------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEE-CCHHHHHHHHHTTCCEEEECC--GGGT----
T ss_pred cccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEec-CCHHHHHHHHHcCCCEEEeCC--CCCC----
Confidence 000 00111223455666554 3666664 5667777 6799999999974 3311
Q ss_pred cEEEeCCeEEEEeeCcccHHHHHhhccccc-cc-cccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcc
Q psy3862 480 ELIEKDGKKVKLFYGMSSTTAMDKHAGGVA-EY-RAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRA 557 (671)
Q Consensus 480 ~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~-~y-~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a 557 (671)
. ...|.+...++.++..+.. +. ...+|+ |++..|+.|||+- |++
T Consensus 286 -~---------~~~g~~~~~~l~~v~~av~~~ipVia~GG---I~~g~Dv~kalal-------GAd-------------- 331 (392)
T 2nzl_A 286 -Q---------LDGVPATIDVLPEIVEAVEGKVEVFLDGG---VRKGTDVLKALAL-------GAK-------------- 331 (392)
T ss_dssp -S---------STTCCCHHHHHHHHHHHHTTSSEEEECSS---CCSHHHHHHHHHT-------TCS--------------
T ss_pred -c---------CCCCcChHHHHHHHHHHcCCCCEEEEECC---CCCHHHHHHHHHh-------CCC--------------
Confidence 1 2357788888777654332 10 123443 7899999999982 222
Q ss_pred eEEEecccccccccchhhhcccccccceeeccccccccccccccchhccccccccCCCceEecccccCHHHHHHHHHHHH
Q psy3862 558 TFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGL 637 (671)
Q Consensus 558 ~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGL 637 (671)
.|.+ | +. +.|++.. .|. -.+++++..+...|
T Consensus 332 -~V~i----------------G-r~--~l~~~~~----------------------~g~-------~gv~~~l~~l~~el 362 (392)
T 2nzl_A 332 -AVFV----------------G-RP--IVWGLAF----------------------QGE-------KGVQDVLEILKEEF 362 (392)
T ss_dssp -EEEE----------------C-HH--HHHHHHH----------------------HHH-------HHHHHHHHHHHHHH
T ss_pred -eeEE----------------C-HH--HHHHHHh----------------------cCh-------HHHHHHHHHHHHHH
Confidence 2211 1 00 1111110 010 13678899999999
Q ss_pred hhhccccCccccccccccc
Q psy3862 638 RSACTYVGASKLKELPRRA 656 (671)
Q Consensus 638 rs~m~y~Ga~~l~el~~~a 656 (671)
+..|.++|.++++||++..
T Consensus 363 ~~~m~~~G~~~i~el~~~~ 381 (392)
T 2nzl_A 363 RLAMALSGCQNVKVIDKTL 381 (392)
T ss_dssp HHHHHHHTCSBGGGCCGGG
T ss_pred HHHHHHhCCCcHHHHhhhh
Confidence 9999999999999998753
No 62
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=98.59 E-value=5.8e-08 Score=103.09 Aligned_cols=192 Identities=17% Similarity=0.151 Sum_probs=117.7
Q ss_pred ccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEE-ccCCCHHHHHHHHhcCccccc-ceeeeccc-C
Q psy3862 315 VDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTI-HKYYTLEEWKAFAVQNPDVIK-HVADGGCT-S 391 (671)
Q Consensus 315 Vdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvi-hr~~~~e~~~~~v~~~~~~~~-~v~~~~~~-~ 391 (671)
..+.++|+ +.+.+..|||.++|..++++++|.+.++.||+|++ .++.++++..+.+++.++... .+...... .
T Consensus 13 ~~~~t~~~----~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~ 88 (326)
T 3bo9_A 13 MTVRTRVT----DLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVS 88 (326)
T ss_dssp CCCCCHHH----HHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETTS
T ss_pred eeecchhH----HhcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEeccC
Confidence 34455554 34567899999999999999999999999999999 577899988877776554322 12221112 2
Q ss_pred h---hhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEE
Q psy3862 392 P---GDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVML 467 (671)
Q Consensus 392 ~---~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~v 467 (671)
+ +.++.++++|+|++.+. .|... ++ ++.++++ +-.+.. .+.+.+.++ +.++|||+|.+
T Consensus 89 ~~~~~~~~~~~~~g~d~V~l~---~g~p~---~~----------~~~l~~~-g~~v~~-~v~s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 89 PWADDLVKVCIEEKVPVVTFG---AGNPT---KY----------IRELKEN-GTKVIP-VVASDSLARMVERAGADAVIA 150 (326)
T ss_dssp TTHHHHHHHHHHTTCSEEEEE---SSCCH---HH----------HHHHHHT-TCEEEE-EESSHHHHHHHHHTTCSCEEE
T ss_pred CCHHHHHHHHHHCCCCEEEEC---CCCcH---HH----------HHHHHHc-CCcEEE-EcCCHHHHHHHHHcCCCEEEE
Confidence 2 34455588999999974 23221 12 1222322 111222 245556665 67999999988
Q ss_pred -CccccCCccCCCcEEEeCCeEEEEeeCcccHHHHHhhccccccccccCCceEeeecCCCHHHHHH-----HHHhhHhHh
Q psy3862 468 -GGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQ-----DILGGLRSA 541 (671)
Q Consensus 468 -G~~g~G~s~ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag 541 (671)
|. .+|+. .| ..+....+.+......--....|+ |.+.-|+.++++ |++|+.+-.
T Consensus 151 ~g~-~~GG~---------------~G-~~~~~~ll~~i~~~~~iPviaaGG---I~~~~dv~~al~~GA~gV~vGs~~~~ 210 (326)
T 3bo9_A 151 EGM-ESGGH---------------IG-EVTTFVLVNKVSRSVNIPVIAAGG---IADGRGMAAAFALGAEAVQMGTRFVA 210 (326)
T ss_dssp ECT-TSSEE---------------CC-SSCHHHHHHHHHHHCSSCEEEESS---CCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred ECC-CCCcc---------------CC-CccHHHHHHHHHHHcCCCEEEECC---CCCHHHHHHHHHhCCCEEEechHHHc
Confidence 63 33311 01 123334443322111111123332 567789999998 899999999
Q ss_pred ccccCcc
Q psy3862 542 CTYVGAS 548 (671)
Q Consensus 542 ~~e~~g~ 548 (671)
+.|+++.
T Consensus 211 ~~e~~~~ 217 (326)
T 3bo9_A 211 SVESDVH 217 (326)
T ss_dssp BSSCCSC
T ss_pred Ccccccc
Confidence 9998775
No 63
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=98.43 E-value=5.4e-07 Score=101.22 Aligned_cols=261 Identities=13% Similarity=0.105 Sum_probs=150.0
Q ss_pred CCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCC---C----CCHHHHHHHHH--cCCeEEEccC-
Q psy3862 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDT---V----GTFEMAKHLAK--HGLFTTIHKY- 364 (671)
Q Consensus 295 l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDt---V----~~~~mA~~la~--~Gglgvihr~- 364 (671)
-.|+++.|+|..- ...+++||+++|- ...+..||+-|||-. + ++..+|++-.+ +|..-++.-.
T Consensus 159 ~af~~i~l~pr~L--~dv~~~d~st~i~-----G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a 231 (511)
T 1kbi_A 159 NAYHRIFFKPKIL--VDVRKVDISTDML-----GSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLA 231 (511)
T ss_dssp HGGGGCEECCCCS--CCCSSCBCCEEET-----TEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTC
T ss_pred HHhhhhccccccc--cCcccccCccccC-----CccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcc
Confidence 3599999999985 3448999999984 567899999999985 3 45668888777 8887777654
Q ss_pred -CCHHHHHHHHhcCcccccceeeecccC-hhhH----HHHHHcCCcEEEEcccc---cccccc--------c----c---
Q psy3862 365 -YTLEEWKAFAVQNPDVIKHVADGGCTS-PGDV----AKAMGAGADFVMLGGMF---AGHDQS--------G----G--- 420 (671)
Q Consensus 365 -~~~e~~~~~v~~~~~~~~~v~~~~~~~-~~~~----~~l~~aG~d~i~id~~a---~gh~~~--------~----~--- 420 (671)
.++|+..+... .++. +.+.---... ++.. .+..++|+|.|+|+ .. .|+-+. + .
T Consensus 232 ~~s~e~v~~~~~-~~~~-~~~~QLy~~~d~~~~~~~~~rae~aG~~al~it-vd~p~~g~R~~~~r~g~~~p~~~~~~~~ 308 (511)
T 1kbi_A 232 SCSPEEIIEAAP-SDKQ-IQWYQLYVNSDRKITDDLVKNVEKLGVKALFVT-VDAPSLGQREKDMKLKFSNTKAGPKAMK 308 (511)
T ss_dssp SSCHHHHHHTCC-CSSC-CEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEE-CSCSSCCCCHHHHHHHHTTCC-------
T ss_pred cCCHHHHHhhcC-CCCC-CeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEe-CCCCCccccHHHHhccCCCCcccccccc
Confidence 67887755320 0110 1111111112 2222 22346899988776 32 232000 0 0
Q ss_pred -----------ccc---cccccccccccccccccCc-eeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCcEEEe
Q psy3862 421 -----------ELT---NIEYMFFPLVGDMNSYLGG-VVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGELIEK 484 (671)
Q Consensus 421 -----------~~~---~~~~~~~~~~~~~~~~~~~-~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~v~~ 484 (671)
.++ .........++++++.++- +++-|+ .+.+.++ +.++|||+|.|+. ..| . +.
T Consensus 309 g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv-~~~e~A~~a~~aGad~I~vs~-hgG-~----~~--- 378 (511)
T 1kbi_A 309 KTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGV-QRTEDVIKAAEIGVSGVVLSN-HGG-R----QL--- 378 (511)
T ss_dssp CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEE-CSHHHHHHHHHTTCSEEEECC-TTT-T----SS---
T ss_pred cccccccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeC-CCHHHHHHHHHcCCCEEEEcC-CCC-c----cC---
Confidence 000 0000112224455555433 555553 4566666 6799999999985 333 1 11
Q ss_pred CCeEEEEeeCcccHHHHHhhccccccc-------cccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcc
Q psy3862 485 DGKKVKLFYGMSSTTAMDKHAGGVAEY-------RAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRA 557 (671)
Q Consensus 485 ~g~~~k~g~G~~q~tAi~~~a~~~~~y-------~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a 557 (671)
..+.+...++.++..+..+. ...+|+ |++..|+.|||+- |++
T Consensus 379 -------d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GG---I~~g~Dv~kaLal-------GAd-------------- 427 (511)
T 1kbi_A 379 -------DFSRAPIEVLAETMPILEQRNLKDKLEVFVDGG---VRRGTDVLKALCL-------GAK-------------- 427 (511)
T ss_dssp -------TTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESS---CCSHHHHHHHHHH-------TCS--------------
T ss_pred -------CCCCchHHHHHHHHHHHHhhccCCCcEEEEECC---CCCHHHHHHHHHc-------CCC--------------
Confidence 23456666666554433210 122232 7889999999983 232
Q ss_pred eEEEecccccccccchhhhcccccccceeeccccccccccccccchhccccccccCCCceEecccccCHHHHHHHHHHHH
Q psy3862 558 TFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGL 637 (671)
Q Consensus 558 ~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGL 637 (671)
.|.++. . +.|++.. .|. -.+++++..+...|
T Consensus 428 -aV~iGr-----------------~--~l~~~~~----------------------~G~-------~gv~~~l~~l~~el 458 (511)
T 1kbi_A 428 -GVGLGR-----------------P--FLYANSC----------------------YGR-------NGVEKAIEILRDEI 458 (511)
T ss_dssp -EEEECH-----------------H--HHHHHHH----------------------HHH-------HHHHHHHHHHHHHH
T ss_pred -EEEECH-----------------H--HHHHHHh----------------------cCh-------HHHHHHHHHHHHHH
Confidence 221100 0 0111110 010 13678889999999
Q ss_pred hhhccccCcccccccccc
Q psy3862 638 RSACTYVGASKLKELPRR 655 (671)
Q Consensus 638 rs~m~y~Ga~~l~el~~~ 655 (671)
+..|.++|.++++||++.
T Consensus 459 ~~~m~~~G~~~i~el~~~ 476 (511)
T 1kbi_A 459 EMSMRLLGVTSIAELKPD 476 (511)
T ss_dssp HHHHHHHTCCBGGGCCGG
T ss_pred HHHHHHhCCCcHHHHhHH
Confidence 999999999999999875
No 64
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=98.37 E-value=6.9e-07 Score=94.87 Aligned_cols=277 Identities=16% Similarity=0.074 Sum_probs=148.3
Q ss_pred ccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCH------HHHHHHHHcCCeEEEccCC-
Q psy3862 293 IKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTF------EMAKHLAKHGLFTTIHKYY- 365 (671)
Q Consensus 293 ~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~------~mA~~la~~Gglgvihr~~- 365 (671)
....||++.|+|..-.....+++||+++|- ...+..|++-|||-..+.. .+|.+..++|...++.-.-
T Consensus 24 ~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~-----g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~~~~~~ 98 (332)
T 1vcf_A 24 TTTGLEGFRLRYQALAGLALSEVDLTTPFL-----GKTLKAPFLIGAMTGGEENGERINLALAEAAEALGVGMMLGSGRI 98 (332)
T ss_dssp CCCSGGGEEECCCTTCCCCGGGCCCCEEET-----TEEESSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEEEECHH
T ss_pred chhhhhhcEEehhhCCCCCCCCCCcceEEC-----CcccCCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEeCCchh
Confidence 345799999999986533457899999885 5678899999999876543 7889999999766655331
Q ss_pred -----CHHHHHHHHhcC-cccccceeeec-----ccChhhHHHHHH-cCCcEEEEcccccccc-cccccccccccccccc
Q psy3862 366 -----TLEEWKAFAVQN-PDVIKHVADGG-----CTSPGDVAKAMG-AGADFVMLGGMFAGHD-QSGGELTNIEYMFFPL 432 (671)
Q Consensus 366 -----~~e~~~~~v~~~-~~~~~~v~~~~-----~~~~~~~~~l~~-aG~d~i~id~~a~gh~-~~~~~~~~~~~~~~~~ 432 (671)
..+.|.+ ++.. ++ .+.++..+ ..+++...++++ +++|.+.++ ..++.. ....+. ..+.....
T Consensus 99 ~le~~~~~~~~q-l~~~~~d-~pv~~~~~~~q~~~~~~~~~~~a~~~~~~~a~~i~-~n~~~~~~~~~~~--~~~~~~~~ 173 (332)
T 1vcf_A 99 LLERPEALRSFR-VRKVAPK-ALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFH-VNPLQEAVQRGDT--DFRGLVER 173 (332)
T ss_dssp HHHCTTTHHHHC-CTTTCSS-SCEEEEEEGGGGGTCCHHHHHHHHHHHTCSEEEEE-CCHHHHHHTTSCC--CCTTHHHH
T ss_pred cccCCCccceEE-eeccCCC-ceeecccChhhhhccChHHHHHHHhhcCCCceeec-cchHHHHhcCCCc--cHHHHHHH
Confidence 2223433 2221 12 11111111 123455555543 588988877 321100 000000 00001123
Q ss_pred ccccccccCc-eeecccc---CchhHHH-HHHcCCcEEEECccccCCc---cCCCcEEEeCCeEEEEeeCcccHHHHHhh
Q psy3862 433 VGDMNSYLGG-VVDGGCT---SPGDVAK-AMGAGADFVMLGGMFAGHD---QSGGELIEKDGKKVKLFYGMSSTTAMDKH 504 (671)
Q Consensus 433 ~~~~~~~~~~-~i~gG~v---~t~~~a~-~l~aGAd~V~vG~~g~G~s---~ctt~~v~~~g~~~k~g~G~~q~tAi~~~ 504 (671)
++++++ ++- +++-+ + .+.+.++ +.++|||+|.|.. ..|++ +...|.....+..+....|.|...++.++
T Consensus 174 i~~vr~-~~~Pv~vK~-v~~g~~~e~a~~~~~~G~d~I~vs~-~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v 250 (332)
T 1vcf_A 174 LAELLP-LPFPVMVKE-VGHGLSREAALALRDLPLAAVDVAG-AGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEV 250 (332)
T ss_dssp HHHHCS-CSSCEEEEC-SSSCCCHHHHHHHTTSCCSEEECCC-BTSCCHHHHHHTC--------CCTTCSCBHHHHHHHH
T ss_pred HHHHHc-CCCCEEEEe-cCCCCCHHHHHHHHHcCCCEEEeCC-CCCCcchhHHHhhccccchhhhHhhccccHHHHHHHH
Confidence 445555 432 33222 2 4566666 4599999999974 22311 00002100000011134577777777665
Q ss_pred ccccccc-cccCCceEeeecCCCHHHHHHHHHhhHhHhccccCcccccccCCcceEEEecccccccccchhhhccccccc
Q psy3862 505 AGGVAEY-RAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDILGGLRSA 583 (671)
Q Consensus 505 a~~~~~y-~~~~G~~v~i~~~Gdi~kAiavMlG~~~ag~~e~~g~~i~e~~~~a~fv~~~~~~~~~~~~~~~~~~G~~~~ 583 (671)
.....+. ...+|+ |++..|+.|+|+- |++ +|.++. .
T Consensus 251 ~~~~~~ipvia~GG---I~~~~d~~kal~~-------GAd---------------~V~igr--------------~---- 287 (332)
T 1vcf_A 251 REVLPHLPLVASGG---VYTGTDGAKALAL-------GAD---------------LLAVAR--------------P---- 287 (332)
T ss_dssp HHHCSSSCEEEESS---CCSHHHHHHHHHH-------TCS---------------EEEECG--------------G----
T ss_pred HHhcCCCeEEEECC---CCCHHHHHHHHHh-------CCC---------------hHhhhH--------------H----
Confidence 4332110 123332 6888899998873 333 221100 0
Q ss_pred ceeeccccccccccccccchhccccccccCCCceEecccccCHHHHHHHHHHHHhhhccccCccccccccccc
Q psy3862 584 CTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRA 656 (671)
Q Consensus 584 k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~~l~~l~gGLrs~m~y~Ga~~l~el~~~a 656 (671)
+.|+. -.|. -.+++++..+...|+..|.++|.++++||++..
T Consensus 288 -~l~~~-----------------------~~G~-------~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~ 329 (332)
T 1vcf_A 288 -LLRPA-----------------------LEGA-------ERVAAWIGDYLEELRTALFAIGARNPKEARGRV 329 (332)
T ss_dssp -GHHHH-----------------------TTCH-------HHHHHHHHHHHHHHHHHHHHHTCSSGGGGTTCE
T ss_pred -HHHHH-----------------------hccH-------HHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 00000 0121 147889999999999999999999999998753
No 65
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.29 E-value=3.8e-06 Score=88.15 Aligned_cols=194 Identities=14% Similarity=0.123 Sum_probs=112.0
Q ss_pred ceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEE--------------------------eec----C
Q psy3862 39 VDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTT--------------------------IHK----Y 88 (671)
Q Consensus 39 Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgv--------------------------Ih~----n 88 (671)
+||++++ .+++|+-||+.+++....+.+....+++.| +|. +|+ |
T Consensus 2 ~dl~~~i-----~g~~l~nPi~~Aag~~~~~~~~~~~~~~~G-~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNL-----LDHVFANPFMNAAGVLCSTEEDLRCMTASS-SGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEE-----TTEEESSSEEECTTSSCSSHHHHHHHHHSS-CSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEE-----CCEecCCCcEECCCCCCCCHHHHHHHHHCC-CCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 5888998 589999999999976444455556565544 432 211 2
Q ss_pred CCHHHHHHhhhcCcc-cccceEEecC-CChhhHHHH-HHHHHhCCCce---EEEeecc--C--------CCChHHHHHHH
Q psy3862 89 YTLEEWKAFAVQNPD-VIKHVAVSSG-ISAKDLAGL-KEILAALPEIE---YICLDVA--N--------GYTQTFVDFVR 152 (671)
Q Consensus 89 ~~~Eeq~~~i~~~p~-~~~~~~v~~G-~~~~d~~rl-~~l~~a~~~~d---~Ivld~a--~--------G~~~~~~~~ik 152 (671)
...+.+.+.+++... ...|+.++++ ..++++.++ +.+.++ +.| ++.++.. + +.++...+.++
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~--g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~ 153 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSISGLSVEENVAMVRRLAPV--AQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQ 153 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHH--HHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeCCCCHHHHHHHHHHHHHh--CCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHH
Confidence 234443333432211 1245555443 455666443 334344 456 6666543 1 13455667777
Q ss_pred HHHHh--CCCceEEEEEeccHHH----HHHHHHCC-CcEEEECcCCCce-EEE----E-----------ec-c-cCC-cc
Q psy3862 153 RIREM--YPKHVIIAGNVVTGEM----VEELILSG-ADVIKVGIGPGSV-CTT----R-----------LK-N-KTS-DF 206 (671)
Q Consensus 153 ~lr~~--~P~~~li~g~v~t~e~----a~~Li~AG-aD~IvVdga~G~~-~~t----~-----------v~-~-~~~-~~ 206 (671)
.+++. .|...++..+. +.+. ++.+.++| +|+|++-...|.. .+. . +. . ..| .+
T Consensus 154 ~vr~~~~~Pv~vK~~~~~-~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~ 232 (314)
T 2e6f_A 154 QVSLAYGLPFGVKMPPYF-DIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTAL 232 (314)
T ss_dssp HHHHHHCSCEEEEECCCC-CHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHH
T ss_pred HHHHhcCCCEEEEECCCC-CHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHH
Confidence 77764 57666666553 3333 88889999 9999874422110 000 0 00 0 000 12
Q ss_pred hhhhhcc----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 207 FLIQFYS----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 207 ~~i~~i~----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+..++ .+| ..|||-|++.+..++++|||+|.||
T Consensus 233 ~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 233 ANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred HHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 2222221 345 6999999999999999999999998
No 66
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=98.28 E-value=1.3e-06 Score=92.42 Aligned_cols=183 Identities=18% Similarity=0.076 Sum_probs=108.5
Q ss_pred eeCcceEecCCCCCCCHHHHHHHHHcCCeEEEc-cCCC-HHHHHHHHhcCccccc-ceeeecccC-----h---hhHHHH
Q psy3862 330 YQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIH-KYYT-LEEWKAFAVQNPDVIK-HVADGGCTS-----P---GDVAKA 398 (671)
Q Consensus 330 ~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvih-r~~~-~e~~~~~v~~~~~~~~-~v~~~~~~~-----~---~~~~~l 398 (671)
.+..|||.++|..++++++|.+.++.||+|+++ .+++ ++++.+++++.++... .+....... + +.++.+
T Consensus 13 ~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~ 92 (328)
T 2gjl_A 13 GVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAI 92 (328)
T ss_dssp TCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHH
T ss_pred CCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHH
Confidence 467899999999999999999999999999997 4555 8887776665433211 111111112 2 344555
Q ss_pred HHcCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEE-CccccCCcc
Q psy3862 399 MGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVML-GGMFAGHDQ 476 (671)
Q Consensus 399 ~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~v-G~~g~G~s~ 476 (671)
.++|+|++.+. .|+. .++ ++.++++ +-.+. ..+.+.+-++ +.+.|||+|.+ |. .+|+.
T Consensus 93 ~~~g~d~V~~~---~g~p---~~~----------~~~l~~~-gi~vi-~~v~t~~~a~~~~~~GaD~i~v~g~-~~GG~- 152 (328)
T 2gjl_A 93 IEAGIRVVETA---GNDP---GEH----------IAEFRRH-GVKVI-HKCTAVRHALKAERLGVDAVSIDGF-ECAGH- 152 (328)
T ss_dssp HHTTCCEEEEE---ESCC---HHH----------HHHHHHT-TCEEE-EEESSHHHHHHHHHTTCSEEEEECT-TCSBC-
T ss_pred HhcCCCEEEEc---CCCc---HHH----------HHHHHHc-CCCEE-eeCCCHHHHHHHHHcCCCEEEEECC-CCCcC-
Confidence 88999999976 2322 112 2223332 11122 2345555555 67999999998 53 33311
Q ss_pred CCCcEEEeCCeEEEEeeCcccHHHHHhhccccccccccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCcc
Q psy3862 477 SGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGAS 548 (671)
Q Consensus 477 ctt~~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~ 548 (671)
+.. ...+....+.++.....--....|+ |.+.-|+.++++ +++|+.+-.+.|+++.
T Consensus 153 ~G~-------------~~~~~~~~l~~v~~~~~iPviaaGG---I~~~~~v~~al~~GAdgV~vGs~~~~~~e~~~~ 213 (328)
T 2gjl_A 153 PGE-------------DDIPGLVLLPAAANRLRVPIIASGG---FADGRGLVAALALGADAINMGTRFLATRECPIH 213 (328)
T ss_dssp CCS-------------SCCCHHHHHHHHHTTCCSCEEEESS---CCSHHHHHHHHHHTCSEEEESHHHHTSSSSCSC
T ss_pred CCC-------------ccccHHHHHHHHHHhcCCCEEEECC---CCCHHHHHHHHHcCCCEEEECHHHHcCcccccc
Confidence 000 0123334444432221111122232 556678889888 8899999999887665
No 67
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.20 E-value=3.8e-06 Score=90.42 Aligned_cols=45 Identities=20% Similarity=0.224 Sum_probs=39.4
Q ss_pred CcceEecCCC-CCCCHHHHHHHHHcCCeEEEc-cCCCHHHHHHHHhc
Q psy3862 332 GVPIIAANMD-TVGTFEMAKHLAKHGLFTTIH-KYYTLEEWKAFAVQ 376 (671)
Q Consensus 332 ~iPiIaa~MD-tV~~~~mA~~la~~Gglgvih-r~~~~e~~~~~v~~ 376 (671)
..|||.+||. .+++++||.+.++.||+|+|+ .+.++|+..+++++
T Consensus 10 ~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~ 56 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKR 56 (369)
T ss_dssp SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHH
T ss_pred cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHH
Confidence 7899999999 599999999999999999998 66798877666543
No 68
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.18 E-value=3.1e-06 Score=88.29 Aligned_cols=196 Identities=18% Similarity=0.167 Sum_probs=113.7
Q ss_pred CcceeeeeeecccCCCcccCceEEecC-CCccccHHHHHHHHHcCCeE--E------------------------eec--
Q psy3862 37 SEVDITRTFTFRNSGKTYQGVPIIAAN-MDTVGTFEMAKHLAKHGLFT--T------------------------IHK-- 87 (671)
Q Consensus 37 ~~Vdlst~lt~r~~~~~~l~~Piv~a~-M~~vt~~~lA~Ala~~gglg--v------------------------Ih~-- 87 (671)
+++||++++ .+++|+-||+.++ |++.+. ++...+++ +|+| + +|.
T Consensus 3 ~~~~l~~~~-----~g~~l~npi~~aag~~~~~~-~~~~~~~~-~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g 75 (311)
T 1ep3_A 3 ENNRLSVKL-----PGLDLKNPIIPASGCFGFGE-EYAKYYDL-NKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIG 75 (311)
T ss_dssp CCTTTCEEE-----TTEEESSSEEECTTSSTTST-TGGGTSCG-GGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCC
T ss_pred CCCccceEE-----CCEECCCCcEECCCCCCCCH-HHHHHHHh-cCCCEEEeCeeccCccCCCCCCeEEECCcccccccC
Confidence 689999999 5899999999998 887664 23332222 2222 2 232
Q ss_pred --CCCHHHHHHh----hhc-CcccccceEEecCC-ChhhHHHHHHHHHhCCCceEEEeecc-----C------CCChHHH
Q psy3862 88 --YYTLEEWKAF----AVQ-NPDVIKHVAVSSGI-SAKDLAGLKEILAALPEIEYICLDVA-----N------GYTQTFV 148 (671)
Q Consensus 88 --n~~~Eeq~~~----i~~-~p~~~~~~~v~~G~-~~~d~~rl~~l~~a~~~~d~Ivld~a-----~------G~~~~~~ 148 (671)
+.+++++.+. +++ .| ..++.++.+. .++++.++.+.+....+.|.+-++.. + +.++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~--~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~ 153 (311)
T 1ep3_A 76 LQNPGLEVIMTEKLPWLNENFP--ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAA 153 (311)
T ss_dssp CCBCCHHHHHHTHHHHHHHHCT--TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHhcCC--CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHH
Confidence 2455554332 222 21 3456665543 35566665555542137787766432 1 1234456
Q ss_pred HHHHHHHHh--CCCceEEEEEecc-HHHHHHHHHCCCcEEEECcC------CCceEE-------EEe-cccC-C-cchhh
Q psy3862 149 DFVRRIREM--YPKHVIIAGNVVT-GEMVEELILSGADVIKVGIG------PGSVCT-------TRL-KNKT-S-DFFLI 209 (671)
Q Consensus 149 ~~ik~lr~~--~P~~~li~g~v~t-~e~a~~Li~AGaD~IvVdga------~G~~~~-------t~v-~~~~-~-~~~~i 209 (671)
+.++.+++. .|...++.....+ .+.++.|.++|+|+|.+.+. |+.... ... .... + .+..+
T Consensus 154 eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i 233 (311)
T 1ep3_A 154 ALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLI 233 (311)
T ss_dssp HHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHH
Confidence 777777765 3544444433333 56689999999999999541 110000 000 0000 0 01223
Q ss_pred hhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 210 QFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 210 ~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+. .+| ++|||.|.+.+..++++|||+|.||
T Consensus 234 ~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 234 HQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp HHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 2232 356 6999999999999999999999999
No 69
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=98.09 E-value=5e-06 Score=89.11 Aligned_cols=206 Identities=19% Similarity=0.179 Sum_probs=122.7
Q ss_pred CCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCC------CCHHHHHHHHHcCCeEEEcc--CCC
Q psy3862 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTV------GTFEMAKHLAKHGLFTTIHK--YYT 366 (671)
Q Consensus 295 l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV------~~~~mA~~la~~Gglgvihr--~~~ 366 (671)
-.|+++.|+|.- +..-+++||+++|= ...+..||.-||+-.. +|..+|++-++.|-.-++-- .++
T Consensus 39 ~af~~~~l~prv--l~dv~~~d~~t~ll-----G~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~lSt~ss~s 111 (352)
T 3sgz_A 39 AAFKRIRLRPRY--LRDMSKVDTRTTIQ-----GQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYS 111 (352)
T ss_dssp HHHHTCCBCCCC--SSCCSSCBCCEEET-----TEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEECTTCSSC
T ss_pred HHHHhceeeccc--cCCCCCCCCceEEC-----CcccCCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEeCCCCCCC
Confidence 458899999965 33446789999984 5678999999997544 47889999999999888874 588
Q ss_pred HHHHHHHHhcCcccccceeeecccChhh-----HHHHHHcCCcEEEEcccc---ccccccc----------cccccc---
Q psy3862 367 LEEWKAFAVQNPDVIKHVADGGCTSPGD-----VAKAMGAGADFVMLGGMF---AGHDQSG----------GELTNI--- 425 (671)
Q Consensus 367 ~e~~~~~v~~~~~~~~~v~~~~~~~~~~-----~~~l~~aG~d~i~id~~a---~gh~~~~----------~~~~~~--- 425 (671)
+||..+.....+.-.+.. ...+.+ +++..++|+..|++. +- .|.-+.- +.+.+.
T Consensus 112 ~e~v~~~~~~~~~wfQlY----~~~d~~~~~~l~~ra~~aG~~alvlT-vD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~ 186 (352)
T 3sgz_A 112 LEDIVAAAPEGFRWFQLY----MKSDWDFNKQMVQRAEALGFKALVIT-IDTPVLGNRRRDKRNQLNLEANILKAALRAL 186 (352)
T ss_dssp HHHHHHHSTTCEEEEECC----CCSCHHHHHHHHHHHHHTTCCCEEEE-CSCSSCCCCHHHHHHHHHSCHHHHTTCC---
T ss_pred HHHHHHhccCccceeccc----cCCCHHHHHHHHHHHHHcCCCEEEEE-eCCCCCCcchhhhhcCCCCCcccchhhhccc
Confidence 999887542211111100 112222 233356898877765 22 2321000 000000
Q ss_pred ---------------cccccccccccccccC-ceeeccccCchhHHH-HHHcCCcEEEECccccCCccCCCcEEEeCCeE
Q psy3862 426 ---------------EYMFFPLVGDMNSYLG-GVVDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGELIEKDGKK 488 (671)
Q Consensus 426 ---------------~~~~~~~~~~~~~~~~-~~i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~~v~~~g~~ 488 (671)
.......++++++.++ .+++-|+ .+.+.++ +.++|||+|.|.. .|.. +.
T Consensus 187 ~~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v-~~~e~A~~a~~~GaD~I~vsn--~GG~----~~------- 252 (352)
T 3sgz_A 187 KEEKPTQSVPVLFPKASFCWNDLSLLQSITRLPIILKGI-LTKEDAELAMKHNVQGIVVSN--HGGR----QL------- 252 (352)
T ss_dssp ------------CCCTTCCHHHHHHHHHHCCSCEEEEEE-CSHHHHHHHHHTTCSEEEECC--GGGT----SS-------
T ss_pred ccccccchhhhhccCCCCCHHHHHHHHHhcCCCEEEEec-CcHHHHHHHHHcCCCEEEEeC--CCCC----cc-------
Confidence 0011123555566554 3666664 5666666 6799999999974 3411 11
Q ss_pred EEEeeCcccHHHHHhhccccc-c-ccccCCceEeeecCCCHHHHHH
Q psy3862 489 VKLFYGMSSTTAMDKHAGGVA-E-YRAAEGKTVQVPYRGDVNDTVQ 532 (671)
Q Consensus 489 ~k~g~G~~q~tAi~~~a~~~~-~-y~~~~G~~v~i~~~Gdi~kAia 532 (671)
..+.+...++.++..... + -...+|+ |++..|+.|||+
T Consensus 253 ---d~~~~~~~~L~~i~~av~~~ipVia~GG---I~~g~Dv~kaLa 292 (352)
T 3sgz_A 253 ---DEVSASIDALREVVAAVKGKIEVYMDGG---VRTGTDVLKALA 292 (352)
T ss_dssp ---CSSCCHHHHHHHHHHHHTTSSEEEEESS---CCSHHHHHHHHH
T ss_pred ---CCCccHHHHHHHHHHHhCCCCeEEEECC---CCCHHHHHHHHH
Confidence 125677777776544321 1 0123332 788999999998
No 70
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.09 E-value=3.6e-05 Score=77.73 Aligned_cols=160 Identities=16% Similarity=0.156 Sum_probs=102.3
Q ss_pred cHHHHHHHHHcCCeEEeecCCCHHHHHHhhhcCcccccce-EEe----cC--CC-hhhHHHHHHHHHhCCCceEEEeecc
Q psy3862 69 TFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHV-AVS----SG--IS-AKDLAGLKEILAALPEIEYICLDVA 140 (671)
Q Consensus 69 ~~~lA~Ala~~gglgvIh~n~~~Eeq~~~i~~~p~~~~~~-~v~----~G--~~-~~d~~rl~~l~~a~~~~d~Ivld~a 140 (671)
..+||.+..+.|..|+.-. ++|+ .+.+++. +..|+ ++. .+ +- ....+++.+++++ ++|++.++..
T Consensus 38 ~~~~A~a~~~~Ga~~i~~~--~~~~-i~~ir~~--v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~a--Gad~I~l~~~ 110 (229)
T 3q58_A 38 VAAMAQAAASAGAVAVRIE--GIEN-LRTVRPH--LSVPIIGIIKRDLTGSPVRITPYLQDVDALAQA--GADIIAFDAS 110 (229)
T ss_dssp HHHHHHHHHHTTCSEEEEE--SHHH-HHHHGGG--CCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHH--TCSEEEEECC
T ss_pred HHHHHHHHHHCCCcEEEEC--CHHH-HHHHHHh--cCCCEEEEEeecCCCCceEeCccHHHHHHHHHc--CCCEEEECcc
Confidence 4689999999999987432 3443 2333321 11121 110 01 10 1235667778888 8899999877
Q ss_pred CC-CChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc--ccC-
Q psy3862 141 NG-YTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS--CIP- 216 (671)
Q Consensus 141 ~G-~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~--~~p- 216 (671)
.. .+..+.++++..++. ...+...+.+.+.++.+.++|+|+|.+. .+|....+ +...+++.++..+. .+|
T Consensus 111 ~~~~p~~l~~~i~~~~~~---g~~v~~~v~t~eea~~a~~~Gad~Ig~~-~~g~t~~~--~~~~~~~~li~~l~~~~ipv 184 (229)
T 3q58_A 111 FRSRPVDIDSLLTRIRLH---GLLAMADCSTVNEGISCHQKGIEFIGTT-LSGYTGPI--TPVEPDLAMVTQLSHAGCRV 184 (229)
T ss_dssp SSCCSSCHHHHHHHHHHT---TCEEEEECSSHHHHHHHHHTTCSEEECT-TTTSSSSC--CCSSCCHHHHHHHHTTTCCE
T ss_pred ccCChHHHHHHHHHHHHC---CCEEEEecCCHHHHHHHHhCCCCEEEec-CccCCCCC--cCCCCCHHHHHHHHHcCCCE
Confidence 54 345566666666542 3455567889999999999999999652 22211000 11224555554442 466
Q ss_pred -CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 217 -QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 217 -~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+.|||.|.+.++.++++|||||.||
T Consensus 185 IA~GGI~t~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 185 IAEGRYNTPALAANAIEHGAWAVTVG 210 (229)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 7999999999999999999999999
No 71
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.04 E-value=1.7e-05 Score=96.02 Aligned_cols=196 Identities=17% Similarity=0.178 Sum_probs=117.9
Q ss_pred CcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEee-----------cC-----------------
Q psy3862 37 SEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIH-----------KY----------------- 88 (671)
Q Consensus 37 ~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh-----------~n----------------- 88 (671)
+++||++++ .+++|+.||+.++|...++.+++.+....| +|++- .|
T Consensus 529 ~~v~ls~~~-----~G~~~~nPv~lAa~~~~~~~~~~~~~~~~g-~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~ 602 (1025)
T 1gte_A 529 DLVDISVEM-----AGLKFINPFGLASAAPTTSSSMIRRAFEAG-WGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGP 602 (1025)
T ss_dssp GGCCCCEEE-----TTEEESSSEEECSSGGGSSHHHHHHHHHHT-CSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSS
T ss_pred ccccceeee-----ccccccCcccccCCCCCCCHHHHHHHHHCC-cCeEEeceecccccccCCCCccEEeccccccccCC
Confidence 689999999 589999999999999888777777655553 33221 01
Q ss_pred -------------CCHHHHHHhhh---c-CcccccceEEec--CCChhhHHHHHHHHHhCCCceEEEeecc--CC-----
Q psy3862 89 -------------YTLEEWKAFAV---Q-NPDVIKHVAVSS--GISAKDLAGLKEILAALPEIEYICLDVA--NG----- 142 (671)
Q Consensus 89 -------------~~~Eeq~~~i~---~-~p~~~~~~~v~~--G~~~~d~~rl~~l~~a~~~~d~Ivld~a--~G----- 142 (671)
..++.+.+.+. + .|+ .++.++. |.+++++.++.+.+.. .+.|+|.++.. +.
T Consensus 603 ~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~--~~~i~~i~~g~~~~~~~~~a~~~~~-~g~d~iein~~~P~~~~~~~ 679 (1025)
T 1gte_A 603 GQSSFLNIELISEKTAAYWCQSVTELKADFPD--NIVIASIMCSYNKNDWMELSRKAEA-SGADALELNLSCPHGMGERG 679 (1025)
T ss_dssp CCSCEEECCCSCSSCHHHHHHHHHHHHHHCTT--SEEEEEECCCSCHHHHHHHHHHHHH-TTCSEEEEECCCBCCCC---
T ss_pred chhheeeeccccchhHHHHHHHHHHHHhcCCC--CCeEEEecCCCCHHHHHHHHHHHHh-cCCCEEEEECCCCCCCCCCC
Confidence 12333322221 1 221 3444443 4556677665555432 26788777643 11
Q ss_pred -------CChHHHHHHHHHHHh--CCCceEEEEEec-cHHHHHHHHHCCCcEEEEC----------cC---------CCc
Q psy3862 143 -------YTQTFVDFVRRIREM--YPKHVIIAGNVV-TGEMVEELILSGADVIKVG----------IG---------PGS 193 (671)
Q Consensus 143 -------~~~~~~~~ik~lr~~--~P~~~li~g~v~-t~e~a~~Li~AGaD~IvVd----------ga---------~G~ 193 (671)
.+..+.+.++.+++. .|...++..++. ..+.++.+.++|+|.|.+- .- ||.
T Consensus 680 ~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr 759 (1025)
T 1gte_A 680 MGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKR 759 (1025)
T ss_dssp --SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTB
T ss_pred cccccccCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEEEEecccccccccccccccccccccccc
Confidence 124456677777765 476666665554 3577999999999999991 10 221
Q ss_pred eEEEEec-ccC-C-cchhhhhcc----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 194 VCTTRLK-NKT-S-DFFLIQFYS----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 194 ~~~t~v~-~~~-~-~~~~i~~i~----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
....... ... | .+..+..+. .+| ..|||-|++.+..++++|||+|.||
T Consensus 760 ~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg 816 (1025)
T 1gte_A 760 TTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVC 816 (1025)
T ss_dssp BCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred ccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEe
Confidence 1000010 000 0 012222221 356 6999999999999999999999999
No 72
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=98.03 E-value=1.4e-05 Score=84.70 Aligned_cols=179 Identities=21% Similarity=0.163 Sum_probs=106.6
Q ss_pred eCcceEecCCCCCCCHHHHHHHHHcCCeEEEc-cCCCHHHHHHHHhcCcccccceeeecc-c-Ch--hh-HHHHHHcCCc
Q psy3862 331 QGVPIIAANMDTVGTFEMAKHLAKHGLFTTIH-KYYTLEEWKAFAVQNPDVIKHVADGGC-T-SP--GD-VAKAMGAGAD 404 (671)
Q Consensus 331 ~~iPiIaa~MDtV~~~~mA~~la~~Gglgvih-r~~~~e~~~~~v~~~~~~~~~v~~~~~-~-~~--~~-~~~l~~aG~d 404 (671)
+..|||.++|..+++.++|.++++.|++|+|. .+.++++..+.+++.++.......... . .+ ++ ++.+.++|+|
T Consensus 11 ~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d 90 (332)
T 2z6i_A 11 IDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVK 90 (332)
T ss_dssp CSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCS
T ss_pred CCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCC
Confidence 57899999999999999999999999999995 778998877777665433211111111 1 22 33 4455789999
Q ss_pred EEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEEEE-CccccCCccCCCcEE
Q psy3862 405 FVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFVML-GGMFAGHDQSGGELI 482 (671)
Q Consensus 405 ~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V~v-G~~g~G~s~ctt~~v 482 (671)
++.+. .|+.. +++ +.++++ +-.+. -.+.+.+.++ +.++|+|+|.+ |. .+| +.
T Consensus 91 ~V~~~---~g~p~---~~i----------~~l~~~-g~~v~-~~v~~~~~a~~~~~~GaD~i~v~g~-~~G-----G~-- 144 (332)
T 2z6i_A 91 VVTTG---AGNPS---KYM----------ERFHEA-GIIVI-PVVPSVALAKRMEKIGADAVIAEGM-EAG-----GH-- 144 (332)
T ss_dssp EEEEC---SSCGG---GTH----------HHHHHT-TCEEE-EEESSHHHHHHHHHTTCSCEEEECT-TSS-----EE--
T ss_pred EEEEC---CCChH---HHH----------HHHHHc-CCeEE-EEeCCHHHHHHHHHcCCCEEEEECC-CCC-----CC--
Confidence 99975 23432 221 222222 11111 2245555565 56899999998 42 222 10
Q ss_pred EeCCeEEEEeeCcccHHHHHhhccccccccccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCc
Q psy3862 483 EKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGA 547 (671)
Q Consensus 483 ~~~g~~~k~g~G~~q~tAi~~~a~~~~~y~~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g 547 (671)
.| ..+....+.+......--....|+ |.+.-|+.++++ |++|+.+-.+.|++.
T Consensus 145 --------~g-~~~~~~ll~~i~~~~~iPViaaGG---I~~~~~~~~al~~GAdgV~vGs~~l~~~e~~~ 202 (332)
T 2z6i_A 145 --------IG-KLTTMTLVRQVATAISIPVIAAGG---IADGEGAAAGFMLGAEAVQVGTRFVVAKESNA 202 (332)
T ss_dssp --------CC-SSCHHHHHHHHHHHCSSCEEEESS---CCSHHHHHHHHHTTCSEEEECHHHHTBTTCCS
T ss_pred --------CC-CccHHHHHHHHHHhcCCCEEEECC---CCCHHHHHHHHHcCCCEEEecHHHhcCccccc
Confidence 01 122333333321111100122232 566778888888 889999999988873
No 73
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.97 E-value=7.5e-05 Score=75.52 Aligned_cols=160 Identities=16% Similarity=0.151 Sum_probs=101.4
Q ss_pred cHHHHHHHHHcCCeEEeecCCCHHHHHHhhhcCcccccce-EEe----cC--C-ChhhHHHHHHHHHhCCCceEEEeecc
Q psy3862 69 TFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHV-AVS----SG--I-SAKDLAGLKEILAALPEIEYICLDVA 140 (671)
Q Consensus 69 ~~~lA~Ala~~gglgvIh~n~~~Eeq~~~i~~~p~~~~~~-~v~----~G--~-~~~d~~rl~~l~~a~~~~d~Ivld~a 140 (671)
..+||.+..+.|..++.-. ++++ .+.+++. +..|+ ++. .+ + -....+.+.+++++ ++|+++++..
T Consensus 38 ~~~~A~a~~~~Ga~~i~~~--~~~~-i~~ir~~--v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~--Gad~V~l~~~ 110 (232)
T 3igs_A 38 VAAMALAAEQAGAVAVRIE--GIDN-LRMTRSL--VSVPIIGIIKRDLDESPVRITPFLDDVDALAQA--GAAIIAVDGT 110 (232)
T ss_dssp HHHHHHHHHHTTCSEEEEE--SHHH-HHHHHTT--CCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHH--TCSEEEEECC
T ss_pred HHHHHHHHHHCCCeEEEEC--CHHH-HHHHHHh--cCCCEEEEEeecCCCcceEeCccHHHHHHHHHc--CCCEEEECcc
Confidence 3689999999998887432 3443 2333321 11221 110 01 1 01235667777888 8899999877
Q ss_pred CC-CChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc--ccC-
Q psy3862 141 NG-YTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS--CIP- 216 (671)
Q Consensus 141 ~G-~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~--~~p- 216 (671)
.. .+..+.++++..++. ...+...+.+.+.++.+.++|+|+|.+. .+|....+ +...+++.++..+. .+|
T Consensus 111 ~~~~p~~l~~~i~~~~~~---g~~v~~~v~t~eea~~a~~~Gad~Ig~~-~~g~t~~~--~~~~~~~~~i~~l~~~~ipv 184 (232)
T 3igs_A 111 ARQRPVAVEALLARIHHH---HLLTMADCSSVDDGLACQRLGADIIGTT-MSGYTTPD--TPEEPDLPLVKALHDAGCRV 184 (232)
T ss_dssp SSCCSSCHHHHHHHHHHT---TCEEEEECCSHHHHHHHHHTTCSEEECT-TTTSSSSS--CCSSCCHHHHHHHHHTTCCE
T ss_pred ccCCHHHHHHHHHHHHHC---CCEEEEeCCCHHHHHHHHhCCCCEEEEc-CccCCCCC--CCCCCCHHHHHHHHhcCCcE
Confidence 54 245556666666542 3455567889999999999999999642 12211000 11224454444442 466
Q ss_pred -CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 217 -QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 217 -~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+.|||.|.+.++.++++|||||.||
T Consensus 185 IA~GGI~t~~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 185 IAEGRYNSPALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEe
Confidence 7999999999999999999999999
No 74
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=97.88 E-value=5.8e-05 Score=81.02 Aligned_cols=207 Identities=17% Similarity=0.122 Sum_probs=116.3
Q ss_pred ecCCcCCCCCCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEE--e-------------------
Q psy3862 27 RPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTT--I------------------- 85 (671)
Q Consensus 27 vP~~~~~~~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgv--I------------------- 85 (671)
.|++.-. +++.||++++ .+++|+-||+.++-....+.+...++...| +|. +
T Consensus 25 ~~~~~~~--~~~~~L~~~~-----~Gl~~~NPv~lAAG~~~~~~e~~~~l~~~G-~G~v~~ktvt~~pq~GNp~PR~~~~ 96 (354)
T 4ef8_A 25 TGGQQMG--RGSMSLQVNL-----LNNTFANPFMNAAGVMCTTTEELVAMTESA-SGSLVSKSCTPALREGNPTPRYQAL 96 (354)
T ss_dssp -----------CCCCCEEE-----TTEEESSSEEECTTSSCSSHHHHHHHHHSS-CSCEEEEEECSSCBCCSCSCCEEEE
T ss_pred CchhhcC--CCCCCcceEE-----CCEECCCCCEeccCCCCCCHHHHHHHHHcC-CCeEEeCcccCcccCCCCCCcEEec
Confidence 3444433 4789999999 599999999988776666667677677664 321 1
Q ss_pred -----ec----CCCHHHHHHhhhcCc-ccccceEEec-CCChhhHHHHHHHHHh--CCCceEEEeecc--C--C------
Q psy3862 86 -----HK----YYTLEEWKAFAVQNP-DVIKHVAVSS-GISAKDLAGLKEILAA--LPEIEYICLDVA--N--G------ 142 (671)
Q Consensus 86 -----h~----n~~~Eeq~~~i~~~p-~~~~~~~v~~-G~~~~d~~rl~~l~~a--~~~~d~Ivld~a--~--G------ 142 (671)
|+ |..+|.+.+.+++.. ....|+.+++ |.+++|+.+..+.++. ..+.|++.+|.. + |
T Consensus 97 ~~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~ 176 (354)
T 4ef8_A 97 PLGSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAY 176 (354)
T ss_dssp TTEEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGG
T ss_pred chhhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhcc
Confidence 11 234555555543221 1124566654 6778887655444441 114677777754 1 1
Q ss_pred CChHHHHHHHHHHHh--CCCceEEEEEecc---HHHHHHHHHCC-CcEEEE----------CcCCCce------EEEEec
Q psy3862 143 YTQTFVDFVRRIREM--YPKHVIIAGNVVT---GEMVEELILSG-ADVIKV----------GIGPGSV------CTTRLK 200 (671)
Q Consensus 143 ~~~~~~~~ik~lr~~--~P~~~li~g~v~t---~e~a~~Li~AG-aD~IvV----------dga~G~~------~~t~v~ 200 (671)
.++.+.+.++.+++. .|...|+.-+... .+.++.+.++| +|.|++ |.-.... ...-++
T Consensus 177 ~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlS 256 (354)
T 4ef8_A 177 DFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLG 256 (354)
T ss_dssp SHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEE
T ss_pred CHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCC
Confidence 234555666766664 4777777765432 23455556888 999975 2100000 000000
Q ss_pred cc--CC-cchhhhhcc----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 201 NK--TS-DFFLIQFYS----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 201 ~~--~~-~~~~i~~i~----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
-. .| ++..+..+. .+| ..|||-|++.+..++++|||+|.||
T Consensus 257 G~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 257 GRYVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp GGGGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEEC
T ss_pred CCCCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEh
Confidence 00 00 122222221 245 6999999999999999999999999
No 75
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=97.81 E-value=6.8e-05 Score=79.40 Aligned_cols=194 Identities=17% Similarity=0.148 Sum_probs=102.8
Q ss_pred cceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEee-cC----------------------------
Q psy3862 38 EVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIH-KY---------------------------- 88 (671)
Q Consensus 38 ~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh-~n---------------------------- 88 (671)
.+||++++ .+++++.||+.+++ +....+++.++++.| +|++- ..
T Consensus 42 ~~~l~~~i-----~g~~l~npi~~aag-~~~~~~~~~~~a~~G-~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g 114 (336)
T 1f76_A 42 VPAKPVNC-----MGLTFKNPLGLAAG-LDKDGECIDALGAMG-FGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMG 114 (336)
T ss_dssp CCCCCEEE-----TTEEESSSEEECTT-SSTTCCCHHHHHHTT-CSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCC
T ss_pred CCCCCeEE-----CCEEcCCCcEeCcc-cCCcHHHHHHHHHcC-ccEEEeCCCCCCCCCCCCCcceeeccccceeeecCC
Confidence 48899999 58999999999975 222334666666554 54320 01
Q ss_pred ---CCHHHHHHhhhcCcccccceEEecCCC--------hhhHHHHHHHHHhCCCceEEEeecc--C--C-----CChHHH
Q psy3862 89 ---YTLEEWKAFAVQNPDVIKHVAVSSGIS--------AKDLAGLKEILAALPEIEYICLDVA--N--G-----YTQTFV 148 (671)
Q Consensus 89 ---~~~Eeq~~~i~~~p~~~~~~~v~~G~~--------~~d~~rl~~l~~a~~~~d~Ivld~a--~--G-----~~~~~~ 148 (671)
...+...+.+++.+ ...++.++++-. .+++.+..+.+.. +.|++.++.. + | ..+...
T Consensus 115 ~~~~g~~~~~~~~~~~~-~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~--g~d~iein~~sP~~~g~~~~~~~~~~~ 191 (336)
T 1f76_A 115 FNNLGVDNLVENVKKAH-YDGVLGINIGKNKDTPVEQGKDDYLICMEKIYA--YAGYIAINISSPNTPGLRTLQYGEALD 191 (336)
T ss_dssp CCBCCHHHHHHHHHHCC-CCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGG--GCSEEEEECCCSSSTTGGGGGSHHHHH
T ss_pred CCCcCHHHHHHHHHhcc-cCCcEEEEecCCCCCcccccHHHHHHHHHHHhc--cCCEEEEEccCCCCCCcccccCHHHHH
Confidence 11233333333221 012455554321 2333333333333 5677666532 1 1 112233
Q ss_pred HHHHHHHH-----------hCCCceEEEEEec---cHHHHHHHHHCCCcEEEECcCC-CceEEE---------Eec-c-c
Q psy3862 149 DFVRRIRE-----------MYPKHVIIAGNVV---TGEMVEELILSGADVIKVGIGP-GSVCTT---------RLK-N-K 202 (671)
Q Consensus 149 ~~ik~lr~-----------~~P~~~li~g~v~---t~e~a~~Li~AGaD~IvVdga~-G~~~~t---------~v~-~-~ 202 (671)
+.++.+++ .+|...++..... ..+.++.|.++|+|+|++.+.. +..... -+. . .
T Consensus 192 ~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~ 271 (336)
T 1f76_A 192 DLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPL 271 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGG
T ss_pred HHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchh
Confidence 44444443 2565555543321 2455889999999999986421 100000 000 0 0
Q ss_pred CC-cchhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 203 TS-DFFLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 203 ~~-~~~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+ .+..+..++ .+| ..|||-|++.+..++++|||+|.+|
T Consensus 272 ~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 272 QLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEee
Confidence 00 112222221 356 6999999999999999999999998
No 76
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=97.57 E-value=0.00027 Score=73.90 Aligned_cols=193 Identities=16% Similarity=0.161 Sum_probs=107.9
Q ss_pred eeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEee----------cC--------------------CC
Q psy3862 41 ITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIH----------KY--------------------YT 90 (671)
Q Consensus 41 lst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh----------~n--------------------~~ 90 (671)
|++++ .+++|+-||+.++.....+.++...+++.| +|.+- .| ..
T Consensus 2 l~~~i-----~g~~l~npv~~Aag~~~~~~~~~~~~~~~G-~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTF-----ANAKFANPFMNASGVHCMTIEDLEELKASQ-AGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLG 75 (311)
T ss_dssp CCEEE-----TTEEESSSEEECTTSSCSSHHHHHHHHHSS-CSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred CceEE-----CCEEcCCCcEECCCCCCCCHHHHHHHHHCC-CCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcc
Confidence 45666 488999999999754333566666665544 44321 11 11
Q ss_pred HHHHHHhhhcCc-cc--ccceEEec-CCChhhHHHHHH-HHHhCCCce-EEEeecc--C--------CCChHHHHHHHHH
Q psy3862 91 LEEWKAFAVQNP-DV--IKHVAVSS-GISAKDLAGLKE-ILAALPEIE-YICLDVA--N--------GYTQTFVDFVRRI 154 (671)
Q Consensus 91 ~Eeq~~~i~~~p-~~--~~~~~v~~-G~~~~d~~rl~~-l~~a~~~~d-~Ivld~a--~--------G~~~~~~~~ik~l 154 (671)
.+.+.+.+.+.. .. ..|+.+++ |..++++.++.+ +.++ +.| ++.++.. + +.++...+.++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~--g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~v 153 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQES--DFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEV 153 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHS--CCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhc--CCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHH
Confidence 343333332111 11 23555443 345566654443 4444 567 7766542 1 1345566777777
Q ss_pred HHh--CCCceEEEEEecc---HHHHHHHHHCCCcEEEECcCCCceE-EE----E-----------eccc--CC-cchhhh
Q psy3862 155 REM--YPKHVIIAGNVVT---GEMVEELILSGADVIKVGIGPGSVC-TT----R-----------LKNK--TS-DFFLIQ 210 (671)
Q Consensus 155 r~~--~P~~~li~g~v~t---~e~a~~Li~AGaD~IvVdga~G~~~-~t----~-----------v~~~--~~-~~~~i~ 210 (671)
++. .|...++..+... .+.++.+.++|+|.|++-...+... +. . +... .| .+..+.
T Consensus 154 r~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~ 233 (311)
T 1jub_A 154 FTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVR 233 (311)
T ss_dssp TTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHH
T ss_pred HHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHH
Confidence 654 4766666655421 2337889999999998844321100 00 0 0000 00 122222
Q ss_pred hcc-----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 211 FYS-----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 211 ~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+. .+| ..|||-|++.+..++++|||+|.||
T Consensus 234 ~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 234 AFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp HHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 221 355 6999999999999999999999999
No 77
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=97.55 E-value=0.00053 Score=73.29 Aligned_cols=183 Identities=14% Similarity=0.052 Sum_probs=104.4
Q ss_pred cCceEEecCCCccccHHHHHHHHHcCCeEEeecCC-CHHHHHH----hhhcCcccccceEEec-CCChhhHHHHHHHH-H
Q psy3862 55 QGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYY-TLEEWKA----FAVQNPDVIKHVAVSS-GISAKDLAGLKEIL-A 127 (671)
Q Consensus 55 l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n~-~~Eeq~~----~i~~~p~~~~~~~v~~-G~~~~d~~rl~~l~-~ 127 (671)
|+-||+.+||.++|+..+.....+.||.|.+-..| +.+.... .+.+......++.+.. |-.++++.++.+++ +
T Consensus 2 l~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~p~~~~~aA~~a~~ 81 (350)
T 3b0p_A 2 LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEA 81 (350)
T ss_dssp CCCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeCCCCHHHHHHHHHHHHH
Confidence 46699999999999988888777888877765433 3333211 1111111234554433 44556665544443 4
Q ss_pred hCCCceEEEeeccC----------C-----CChHHHHHHHHHHHh--CCCceEEE-EEe------ccHHHHHHHHHCCCc
Q psy3862 128 ALPEIEYICLDVAN----------G-----YTQTFVDFVRRIREM--YPKHVIIA-GNV------VTGEMVEELILSGAD 183 (671)
Q Consensus 128 a~~~~d~Ivld~a~----------G-----~~~~~~~~ik~lr~~--~P~~~li~-g~v------~t~e~a~~Li~AGaD 183 (671)
+ +.|.|-++..- | .++.+.+.++.+++. .|...++- |.. .+.+.++.|.++|+|
T Consensus 82 ~--G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d 159 (350)
T 3b0p_A 82 F--GYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVK 159 (350)
T ss_dssp T--TCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCC
T ss_pred c--CCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCC
Confidence 4 66777665321 1 123345556666654 46444432 211 124678899999999
Q ss_pred EEEECcCC---CceEEEEeccc-CCcchhhhhcc----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 184 VIKVGIGP---GSVCTTRLKNK-TSDFFLIQFYS----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 184 ~IvVdga~---G~~~~t~v~~~-~~~~~~i~~i~----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.|.+.+.. |.+-. .-... ..+...+..++ .+| +.|||.|.+.+..+++ |||+|.+|
T Consensus 160 ~I~V~~r~~~~g~~g~-~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 160 VFVVHARSALLALSTK-ANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLG 225 (350)
T ss_dssp EEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEEC
T ss_pred EEEEecCchhcccCcc-cccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEEC
Confidence 99996521 22100 00000 01223333332 345 6999999999999998 99999998
No 78
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=97.54 E-value=0.00024 Score=75.91 Aligned_cols=198 Identities=16% Similarity=0.124 Sum_probs=112.9
Q ss_pred cceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEE--------------------------eec----
Q psy3862 38 EVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTT--------------------------IHK---- 87 (671)
Q Consensus 38 ~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgv--------------------------Ih~---- 87 (671)
-.||++++ .+++|+-||+.++-......+....+...| +|. ||+
T Consensus 35 m~~L~~~~-----~Gl~~~NPv~lAaG~~~~~~e~~~~~~~~G-~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~ 108 (345)
T 3oix_A 35 MVSTHTTI-----GSFDFDNCLMNAAGVYCMTREELAAIDHSE-AGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLP 108 (345)
T ss_dssp -CCCCEEE-----TTEEESCSEEECTTSSCSSHHHHHHHHTSS-CSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCC
T ss_pred cCCcCeEE-----CCEECCCCCEEcCCCCCCCHHHHHHHHHcC-CCeEEeeeecCCCCCCCCCCcEEecccchhccCCCC
Confidence 46899999 599999999988665555666666666654 332 221
Q ss_pred CCCHHHHHHhhhcC--cccccceEEec-CCChhhHHHHHHHHHhCCCceEEEeecc--C--C------CChHHHHHHHHH
Q psy3862 88 YYTLEEWKAFAVQN--PDVIKHVAVSS-GISAKDLAGLKEILAALPEIEYICLDVA--N--G------YTQTFVDFVRRI 154 (671)
Q Consensus 88 n~~~Eeq~~~i~~~--p~~~~~~~v~~-G~~~~d~~rl~~l~~a~~~~d~Ivld~a--~--G------~~~~~~~~ik~l 154 (671)
|..+|.+.+.+++. .....|+.+++ |.+++|+.+..+.++..+-.+++.++.. + | .++.+.+.++.+
T Consensus 109 n~G~~~~~~~l~~~~~~~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av 188 (345)
T 3oix_A 109 NLGINYYLDYVTELQKQPDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEV 188 (345)
T ss_dssp BSCHHHHHHHHHHHHHSTTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHhhccCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHH
Confidence 23455554444321 01123555554 4677777666666653322347777654 1 1 124455566666
Q ss_pred HHh--CCCceEEEEEeccHHHHHHHHHCCCcEEEE---CcCCCce-EE----EEe--ccc---C--Cc-----chhhhhc
Q psy3862 155 REM--YPKHVIIAGNVVTGEMVEELILSGADVIKV---GIGPGSV-CT----TRL--KNK---T--SD-----FFLIQFY 212 (671)
Q Consensus 155 r~~--~P~~~li~g~v~t~e~a~~Li~AGaD~IvV---dga~G~~-~~----t~v--~~~---~--~~-----~~~i~~i 212 (671)
++. .|...|+..+....+-++.+.++|+|.|.. --.-|.. .+ ..+ +.. + +. +..+..+
T Consensus 189 ~~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i 268 (345)
T 3oix_A 189 FTYFTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAF 268 (345)
T ss_dssp TTTCCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHH
T ss_pred HHHhCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHH
Confidence 543 477778876654567777777777775521 0000000 00 000 000 0 11 1222222
Q ss_pred c-----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 213 S-----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 213 ~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+ .+| ..|||-|++.+..++++|||+|.||
T Consensus 269 ~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 269 YKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIG 304 (345)
T ss_dssp HTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEC
Confidence 1 245 6999999999999999999999999
No 79
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.49 E-value=0.0001 Score=74.56 Aligned_cols=60 Identities=15% Similarity=0.210 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCcEEEECcC-CCc-eEEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEE
Q psy3862 171 GEMVEELILSGADVIKVGIG-PGS-VCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVI 238 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga-~G~-~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgv 238 (671)
.+.+++|++.|+++|.+.-. +.. ..++++++++|++- .-+|.|-|.++++.++++|||.+
T Consensus 49 ~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~--------iGaGTVlt~~~a~~Ai~AGA~fI 110 (232)
T 4e38_A 49 IPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEML--------IGAGTILNGEQALAAKEAGATFV 110 (232)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCE--------EEEECCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCE--------EeECCcCCHHHHHHHHHcCCCEE
Confidence 47788999999999977331 110 01222222222210 14899999999999999999999
No 80
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=97.27 E-value=0.00077 Score=72.63 Aligned_cols=193 Identities=17% Similarity=0.115 Sum_probs=103.4
Q ss_pred CcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEEe----------------------------ec-
Q psy3862 37 SEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTI----------------------------HK- 87 (671)
Q Consensus 37 ~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvI----------------------------h~- 87 (671)
++.+|++++ .+++|+-||..++-.......+ .++... |+|++ |+
T Consensus 46 ~~~~L~~~~-----~Gl~~~NPvglAaG~~~~~~~~-~~~~~~-g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~~ 118 (367)
T 3zwt_A 46 DSDMLEVRV-----LGHKFRNPVGIAAGFDKHGEAV-DGLYKM-GFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRY 118 (367)
T ss_dssp CCGGGCEEE-----TTEEESSSEEECTTSSTTSSSH-HHHHHT-TCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECC
T ss_pred CCCCCcEEE-----CCEEcCCCCEeCCCcCCCHHHH-HHHHhc-CcCeEEeCCccCCCCCCCCCCeEEEecCccceeecc
Confidence 578899998 5899999998885432222222 224444 34322 11
Q ss_pred ---CCCHHHHHHhhhcC-c------ccccceEEecCCC------hhhHHHHHHHHHhCCCceEEEeecc--C--C-----
Q psy3862 88 ---YYTLEEWKAFAVQN-P------DVIKHVAVSSGIS------AKDLAGLKEILAALPEIEYICLDVA--N--G----- 142 (671)
Q Consensus 88 ---n~~~Eeq~~~i~~~-p------~~~~~~~v~~G~~------~~d~~rl~~l~~a~~~~d~Ivld~a--~--G----- 142 (671)
|..+|...+.+++. . ....|+.+++|-+ ++|+.+..+.+.. ..|++.+|.+ | |
T Consensus 119 G~~N~G~~~~~~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~--~ad~ielNisCPn~~G~~~l~ 196 (367)
T 3zwt_A 119 GFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGP--LADYLVVNVSSPNTAGLRSLQ 196 (367)
T ss_dssp CCCBCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGG--GCSEEEEECCCTTSTTGGGGG
T ss_pred CCCCccHHHHHHHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhh--hCCEEEEECCCCCCCCccccC
Confidence 12233333333221 0 0123566666532 2333333333332 4678877754 1 1
Q ss_pred CChHHHHHHHHHHH---------hCCCceEEEEEec---cHHHHHHHHHCCCcEEEECcC----------------CCce
Q psy3862 143 YTQTFVDFVRRIRE---------MYPKHVIIAGNVV---TGEMVEELILSGADVIKVGIG----------------PGSV 194 (671)
Q Consensus 143 ~~~~~~~~ik~lr~---------~~P~~~li~g~v~---t~e~a~~Li~AGaD~IvVdga----------------~G~~ 194 (671)
.++.+.+.++.+++ ..|...|+..... ..+.++.+.++|+|.|++-.. +|.+
T Consensus 197 ~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlS 276 (367)
T 3zwt_A 197 GKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLS 276 (367)
T ss_dssp SHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEE
T ss_pred CHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcC
Confidence 12233344444432 1466666665543 246788899999999987421 0100
Q ss_pred EEEEecccCCcchhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 195 CTTRLKNKTSDFFLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 195 ~~t~v~~~~~~~~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
-..+.+ .++..+..++ .+| ..|||-|++.+..++++|||+|.||
T Consensus 277 -G~~i~p--~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 277 -GKPLRD--LSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLY 327 (367)
T ss_dssp -EGGGHH--HHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred -Ccccch--hHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 000000 0112222221 356 6999999999999999999999999
No 81
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=97.24 E-value=0.0003 Score=68.83 Aligned_cols=61 Identities=21% Similarity=0.234 Sum_probs=37.3
Q ss_pred HHHHHHHHCCCcEEEECcCCCce--EEEEecccCCcchhhhhccccC-CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 172 EMVEELILSGADVIKVGIGPGSV--CTTRLKNKTSDFFLIQFYSCIP-QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~~--~~t~v~~~~~~~~~i~~i~~~p-~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+.++.+.++|+|+|.+...-.+. .++.+++.+|. ..+ -+|.+-|.++++.++++|||.+ |+
T Consensus 26 ~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~--------~~~ig~~~v~~~~~~~~a~~~Gad~i-v~ 89 (205)
T 1wa3_A 26 EKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEK--------GAIIGAGTVTSVEQCRKAVESGAEFI-VS 89 (205)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHT--------TCEEEEESCCSHHHHHHHHHHTCSEE-EC
T ss_pred HHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCC--------CcEEEecccCCHHHHHHHHHcCCCEE-Ec
Confidence 56777888999999764321110 11112211110 112 2567789999999999999999 54
No 82
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=97.23 E-value=0.0026 Score=66.91 Aligned_cols=179 Identities=18% Similarity=0.190 Sum_probs=99.1
Q ss_pred ccCceEEecCCCccccHHHHHHHHHcCCeEEeecC-CCHHHH-------HHhhhcCcccccceEEec-CCChhhHHHHHH
Q psy3862 54 YQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKY-YTLEEW-------KAFAVQNPDVIKHVAVSS-GISAKDLAGLKE 124 (671)
Q Consensus 54 ~l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~n-~~~Eeq-------~~~i~~~p~~~~~~~v~~-G~~~~d~~rl~~ 124 (671)
+|+.||+.+||.++++..+....++.| .|.+-.. .+++.. .+.+ ..+ ...++.+.. |-.++++.++.+
T Consensus 2 ~l~nri~~APM~~~t~~~~r~~~~~~G-~gli~te~~~~~~~~~~~~~~~~~l-~~~-~~~~~~~QL~g~~~~~~~~aa~ 78 (318)
T 1vhn_A 2 SLEVKVGLAPMAGYTDSAFRTLAFEWG-ADFAFSEMVSAKGFLMNSQKTEELL-PQP-HERNVAVQIFGSEPNELSEAAR 78 (318)
T ss_dssp ---CEEEECCCTTTCSHHHHHHHHTTT-CCCEECSCEEHHHHHTTCHHHHHHS-CCT-TCTTEEEEEECSCHHHHHHHHH
T ss_pred ccCCCEEECCCCCCCcHHHHHHHHHHC-cCEEEeCCEEEcccccCCHhHHHhh-hCc-CCCeEEEEeCCCCHHHHHHHHH
Confidence 467799999999988887777555554 4654332 223221 1111 111 123443322 445555655544
Q ss_pred HHHhCCCceEEEeeccC----------C-----CChHHHHHHHHHHHh--CCCceEEEEEec---cHHHHHHHHHCCCcE
Q psy3862 125 ILAALPEIEYICLDVAN----------G-----YTQTFVDFVRRIREM--YPKHVIIAGNVV---TGEMVEELILSGADV 184 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~----------G-----~~~~~~~~ik~lr~~--~P~~~li~g~v~---t~e~a~~Li~AGaD~ 184 (671)
..... .|.|-++..- | .++...+.++.+++. +|...++-.... +.+.++.|.++|+|.
T Consensus 79 ~a~~~--~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~ 156 (318)
T 1vhn_A 79 ILSEK--YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDE 156 (318)
T ss_dssp HHTTT--CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCE
T ss_pred HHHHh--CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCE
Confidence 44432 5555554321 1 123445566776665 454445443221 237899999999999
Q ss_pred EEECcCCCceEEEEecccCCcchhhhhcc-ccC--CccccccHHHHHHHHH-cCCCEEEEc
Q psy3862 185 IKVGIGPGSVCTTRLKNKTSDFFLIQFYS-CIP--QAGNVVTGEMVEELIL-SGADVIKVG 241 (671)
Q Consensus 185 IvVdga~G~~~~t~v~~~~~~~~~i~~i~-~~p--~aGnV~t~~~a~~li~-aGAdgvkVG 241 (671)
|.+.+..... .. ...+++..+..++ .+| +.|||-|.+.+..+++ .|||+|-+|
T Consensus 157 i~v~g~~~~~---~~-~~~~~~~~i~~i~~~ipVi~~GgI~s~~da~~~l~~~gad~V~iG 213 (318)
T 1vhn_A 157 VFIHTRTVVQ---SF-TGRAEWKALSVLEKRIPTFVSGDIFTPEDAKRALEESGCDGLLVA 213 (318)
T ss_dssp EEEESSCTTT---TT-SSCCCGGGGGGSCCSSCEEEESSCCSHHHHHHHHHHHCCSEEEES
T ss_pred EEEcCCCccc---cC-CCCcCHHHHHHHHcCCeEEEECCcCCHHHHHHHHHcCCCCEEEEC
Confidence 9985421100 00 0012233333332 456 6899999999999998 799999888
No 83
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=97.19 E-value=0.0012 Score=66.49 Aligned_cols=64 Identities=17% Similarity=0.052 Sum_probs=44.1
Q ss_pred cHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc--ccCCccccccHHHHHHHHHcCCCEEEE
Q psy3862 170 TGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS--CIPQAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 170 t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~--~~p~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
+.++++.+.++|||+|.+|.+..... ..+ -.+++.+. .+++...+.|.+.++.+.++|||.|-+
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p-~~l------~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRP-VDI------DSLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCS-SCH------HHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEEC
T ss_pred cHHHHHHHHHcCCCEEEECccccCCh-HHH------HHHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEe
Confidence 55789999999999999988764210 000 01122221 234667889999999999999998854
No 84
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.19 E-value=0.011 Score=59.36 Aligned_cols=108 Identities=22% Similarity=0.270 Sum_probs=76.0
Q ss_pred CCChhhH-HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCC
Q psy3862 113 GISAKDL-AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP 191 (671)
Q Consensus 113 G~~~~d~-~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~ 191 (671)
+.+.++. +.++.+++. +++.+-+..- .....+.++.+++.||...+-+|.+.+.++++.++++|||+++..
T Consensus 25 ~~~~~~~~~~~~al~~g--Gv~~iel~~k---~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p--- 96 (224)
T 1vhc_A 25 LDNADDILPLADTLAKN--GLSVAEITFR---SEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTP--- 96 (224)
T ss_dssp CSSGGGHHHHHHHHHHT--TCCEEEEETT---STTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECS---
T ss_pred CCCHHHHHHHHHHHHHc--CCCEEEEecc---CchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEEC---
Confidence 4444443 567778887 7777766522 345577888888889987777888778999999999999999542
Q ss_pred CceEEEEecccCCcchhhhhccc--cC-CccccccHHHHHHHHHcCCCEEEE
Q psy3862 192 GSVCTTRLKNKTSDFFLIQFYSC--IP-QAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 192 G~~~~t~v~~~~~~~~~i~~i~~--~p-~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
+. +.++++.... .| +.| +.|...+..+.++|||-|++
T Consensus 97 ~~-----------d~~v~~~ar~~g~~~i~G-v~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 97 GL-----------NPKIVKLCQDLNFPITPG-VNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp SC-----------CHHHHHHHHHTTCCEECE-ECSHHHHHHHHHTTCCEEEE
T ss_pred CC-----------CHHHHHHHHHhCCCEEec-cCCHHHHHHHHHCCCCEEEE
Confidence 21 1122222211 22 335 99999999999999999988
No 85
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=97.16 E-value=0.0011 Score=81.81 Aligned_cols=56 Identities=18% Similarity=0.216 Sum_probs=42.8
Q ss_pred ccccccHHHHHHHHHcCCCEEEE-cccCCCccccce-ecccCcchhhhHHHHHHHhhh
Q psy3862 218 AGNVVTGEMVEELILSGADVIKV-GIGPGSVCTTRL-KTGVGYPQFSAVLECADAAHG 273 (671)
Q Consensus 218 aGnV~t~~~a~~li~aGAdgvkV-G~~~~~~~~Tr~-V~gv~~~~~~~~~~~~~~~~~ 273 (671)
.+++.....++.+.++|||+|.| |.+.|.-++... ....|.|...++.++.++..+
T Consensus 1036 v~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~ 1093 (1520)
T 1ofd_A 1036 VAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLME 1093 (1520)
T ss_dssp ECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHHh
Confidence 55556677888999999999999 777665444432 356788999999999988754
No 86
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.11 E-value=0.0019 Score=65.16 Aligned_cols=64 Identities=17% Similarity=0.060 Sum_probs=44.1
Q ss_pred cHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc--ccCCccccccHHHHHHHHHcCCCEEEE
Q psy3862 170 TGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS--CIPQAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 170 t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~--~~p~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
+.++++.+.++|||+|.++.+..... ..+ -.+++.+. .+++...+.|.+.++.+.++|||.|-+
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p-~~l------~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRP-VAV------EALLARIHHHHLLTMADCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCS-SCH------HHHHHHHHHTTCEEEEECCSHHHHHHHHHTTCSEEEC
T ss_pred cHHHHHHHHHcCCCEEEECccccCCH-HHH------HHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEE
Confidence 56789999999999999988764220 000 01122221 234667889999999999999998854
No 87
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=97.10 E-value=0.0014 Score=64.67 Aligned_cols=171 Identities=21% Similarity=0.195 Sum_probs=100.3
Q ss_pred cCCCcc-ccHHHHHHHHHcCCeEEeecCCCHHHHHHhhhcCcccccceE-E------ecCCCh-hhHHHHHHHHHhCCCc
Q psy3862 62 ANMDTV-GTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVA-V------SSGISA-KDLAGLKEILAALPEI 132 (671)
Q Consensus 62 a~M~~v-t~~~lA~Ala~~gglgvIh~n~~~Eeq~~~i~~~p~~~~~~~-v------~~G~~~-~d~~rl~~l~~a~~~~ 132 (671)
.||... ...++|.++.+.|..++ |.+ +++. .+.+++. +..|+. . ..++.. ...+.+.....+ ++
T Consensus 17 ~p~~~~~~~~~~a~~~~~~Ga~~i-~~~-~~~~-i~~i~~~--~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~--Ga 89 (223)
T 1y0e_A 17 EPLHSSFIMSKMALAAYEGGAVGI-RAN-TKED-ILAIKET--VDLPVIGIVKRDYDHSDVFITATSKEVDELIES--QC 89 (223)
T ss_dssp STTCCHHHHHHHHHHHHHHTCSEE-EEE-SHHH-HHHHHHH--CCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHH--TC
T ss_pred CCCCCCccHHHHHHHHHHCCCeee-ccC-CHHH-HHHHHHh--cCCCEEeeeccCCCccccccCCcHHHHHHHHhC--CC
Confidence 467653 45789999988887775 332 3433 3333221 011220 0 011110 134566666777 77
Q ss_pred eEEEeeccCCC-C-hHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecc-cCCcchhh
Q psy3862 133 EYICLDVANGY-T-QTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKN-KTSDFFLI 209 (671)
Q Consensus 133 d~Ivld~a~G~-~-~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~-~~~~~~~i 209 (671)
+.+++...... + ..+.+.++.+++.+|.. ++...+.+.+.++.+.++|+|+|.+.. +|....+.-.. ..+++..+
T Consensus 90 d~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~-~v~~~~~t~~e~~~~~~~G~d~i~~~~-~g~t~~~~~~~~~~~~~~~~ 167 (223)
T 1y0e_A 90 EVIALDATLQQRPKETLDELVSYIRTHAPNV-EIMADIATVEEAKNAARLGFDYIGTTL-HGYTSYTQGQLLYQNDFQFL 167 (223)
T ss_dssp SEEEEECSCSCCSSSCHHHHHHHHHHHCTTS-EEEEECSSHHHHHHHHHTTCSEEECTT-TTSSTTSTTCCTTHHHHHHH
T ss_pred CEEEEeeecccCcccCHHHHHHHHHHhCCCc-eEEecCCCHHHHHHHHHcCCCEEEeCC-CcCcCCCCCCCCCcccHHHH
Confidence 88877654321 2 34567777777778754 444477888889999999999996532 22110000000 01122222
Q ss_pred hhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 210 QFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 210 ~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+. .+| +.|||.|.+.+..++++|||++-||
T Consensus 168 ~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 168 KDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp HHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEEEC
Confidence 2222 356 6999999999999999999999998
No 88
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.08 E-value=0.00054 Score=68.60 Aligned_cols=60 Identities=22% Similarity=0.338 Sum_probs=41.5
Q ss_pred HHHHHHHHHCCCcEEEECcC-CC-ceEEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEE
Q psy3862 171 GEMVEELILSGADVIKVGIG-PG-SVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVI 238 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga-~G-~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgv 238 (671)
...+++|++.|+++|.+.-. +. ...++.+++++|+.. .-||.|-|.++++.++++||+-+
T Consensus 28 ~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~--------IGAGTVlt~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 28 IPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAI--------VGAGTVCTADDFQKAIDAGAQFI 89 (217)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSE--------EEEECCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCe--------EeeccccCHHHHHHHHHcCCCEE
Confidence 46688999999999987431 11 112333333333311 14899999999999999999998
No 89
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=97.08 E-value=0.0031 Score=62.87 Aligned_cols=159 Identities=18% Similarity=0.193 Sum_probs=97.7
Q ss_pred HHHHHHHHHcCCeEEeecCCCHHHHHHhhhcCcccccce-EEe------cCCCh-hhHHHHHHHHHhCCCceEEEeeccC
Q psy3862 70 FEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHV-AVS------SGISA-KDLAGLKEILAALPEIEYICLDVAN 141 (671)
Q Consensus 70 ~~lA~Ala~~gglgvIh~n~~~Eeq~~~i~~~p~~~~~~-~v~------~G~~~-~d~~rl~~l~~a~~~~d~Ivld~a~ 141 (671)
.+++.++.+.|..++ |.+ +++ +.+.+++.- ..|+ .+. ..+.. ...+++...+.+ +++.+.++...
T Consensus 39 ~~~a~~~~~~G~~~i-~~~-~~~-~i~~i~~~~--~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~--Gad~V~l~~~~ 111 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGI-RAN-SVR-DIKEIQAIT--DLPIIGIIKKDYPPQEPFITATMTEVDQLAAL--NIAVIAMDCTK 111 (234)
T ss_dssp HHHHHHHHHHTCSEE-EEE-SHH-HHHHHHTTC--CSCEEEECBCCCTTSCCCBSCSHHHHHHHHTT--TCSEEEEECCS
T ss_pred HHHHHHHHHCCCcEe-ecC-CHH-HHHHHHHhC--CCCEEeeEcCCCCccccccCChHHHHHHHHHc--CCCEEEEcccc
Confidence 689998888887775 333 343 344444321 1222 110 01111 134567777776 78888876543
Q ss_pred CC-C--hHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEE--EECc-CCCceEEEEecccCCcchhhhhcc--
Q psy3862 142 GY-T--QTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVI--KVGI-GPGSVCTTRLKNKTSDFFLIQFYS-- 213 (671)
Q Consensus 142 G~-~--~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~I--vVdg-a~G~~~~t~v~~~~~~~~~i~~i~-- 213 (671)
.. + ....+.++.+++.+|.. .+...+.+.+.++.+.++|+|+| .+.+ .+++- ....+++..+..+.
T Consensus 112 ~~~~~~~~~~~~i~~i~~~~~~~-~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~-----~~~~~~~~~i~~~~~~ 185 (234)
T 1yxy_A 112 RDRHDGLDIASFIRQVKEKYPNQ-LLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSR-----QEAGPDVALIEALCKA 185 (234)
T ss_dssp SCCTTCCCHHHHHHHHHHHCTTC-EEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSC-----CSSSCCHHHHHHHHHT
T ss_pred cCCCCCccHHHHHHHHHHhCCCC-eEEEeCCCHHHHHHHHHcCCCEEeeeccccCCCCc-----CCCCCCHHHHHHHHhC
Confidence 21 2 24567777777777744 45557788899999999999999 3433 22210 00112333333332
Q ss_pred ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 214 CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 214 ~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+| +.|||.|.+.+..++++|||++-||
T Consensus 186 ~ipvia~GGI~s~~~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 186 GIAVIAEGKIHSPEEAKKINDLGVAGIVVG 215 (234)
T ss_dssp TCCEEEESCCCSHHHHHHHHTTCCSEEEEC
T ss_pred CCCEEEECCCCCHHHHHHHHHCCCCEEEEc
Confidence 356 7999999999999999999999998
No 90
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=97.06 E-value=0.014 Score=56.88 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=66.6
Q ss_pred CCChhhHHHH-HHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCC-CceEEEEEeccHHHHHHHHHCCCcEEEECcC
Q psy3862 113 GISAKDLAGL-KEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYP-KHVIIAGNVVTGEMVEELILSGADVIKVGIG 190 (671)
Q Consensus 113 G~~~~d~~rl-~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P-~~~li~g~v~t~e~a~~Li~AGaD~IvVdga 190 (671)
+.+.++..++ +.+.+. +++.+.+.... ....+.++.+|+.+| ...+-++.+.+.+.++.++++|+|+| +.
T Consensus 18 ~~~~~~~~~~~~~~~~~--G~~~iev~~~~---~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~-- 89 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEG--GVHLIEITFTV---PDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VS-- 89 (205)
T ss_dssp CSSHHHHHHHHHHHHHT--TCCEEEEETTS---TTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-EC--
T ss_pred cCCHHHHHHHHHHHHHC--CCCEEEEeCCC---hhHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-Ec--
Confidence 3444444443 334444 56777554221 234556777776665 33344446678999999999999999 42
Q ss_pred CCceEEEEecccCCcchhhhhcc--ccCCccccccHHHHHHHHHcCCCEEEE
Q psy3862 191 PGSVCTTRLKNKTSDFFLIQFYS--CIPQAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 191 ~G~~~~t~v~~~~~~~~~i~~i~--~~p~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
++.. -.+++.+. .+|+--|+.|...++.++++|||.+++
T Consensus 90 ~~~~-----------~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~ 130 (205)
T 1wa3_A 90 PHLD-----------EEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKL 130 (205)
T ss_dssp SSCC-----------HHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEE
T ss_pred CCCC-----------HHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEE
Confidence 3211 11222222 234333778999999999999999986
No 91
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.06 E-value=0.012 Score=59.04 Aligned_cols=108 Identities=20% Similarity=0.218 Sum_probs=76.2
Q ss_pred CCChhh-HHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCC
Q psy3862 113 GISAKD-LAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP 191 (671)
Q Consensus 113 G~~~~d-~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~ 191 (671)
+.+.++ .+.++.+++. +++.+-+..- .....+.++.+++.||...+-+|.+.+.++++.++++|||++.. +
T Consensus 34 ~~~~~~~~~~~~al~~g--Gv~~iel~~k---~~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~---p 105 (225)
T 1mxs_A 34 IAREEDILPLADALAAG--GIRTLEVTLR---SQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVT---P 105 (225)
T ss_dssp CSCGGGHHHHHHHHHHT--TCCEEEEESS---STHHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEEC---S
T ss_pred CCCHHHHHHHHHHHHHC--CCCEEEEecC---CccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEe---C
Confidence 334444 3567778887 7777666522 34566788888888998888888888899999999999999964 2
Q ss_pred CceEEEEecccCCcchhhhhccc--cC-CccccccHHHHHHHHHcCCCEEEE
Q psy3862 192 GSVCTTRLKNKTSDFFLIQFYSC--IP-QAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 192 G~~~~t~v~~~~~~~~~i~~i~~--~p-~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
+. +.++++.... +| +-| +.|...+..++++|||-|++
T Consensus 106 ~~-----------d~~v~~~~~~~g~~~i~G-~~t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 106 GI-----------TEDILEAGVDSEIPLLPG-ISTPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp SC-----------CHHHHHHHHHCSSCEECE-ECSHHHHHHHHTTTCCEEEE
T ss_pred CC-----------CHHHHHHHHHhCCCEEEe-eCCHHHHHHHHHCCCCEEEE
Confidence 21 1222222211 23 334 99999999999999999988
No 92
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.04 E-value=0.001 Score=66.86 Aligned_cols=58 Identities=26% Similarity=0.290 Sum_probs=39.7
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhc-cccC----CccccccHHHHHHHHHcCCCEEE
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFY-SCIP----QAGNVVTGEMVEELILSGADVIK 239 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i-~~~p----~aGnV~t~~~a~~li~aGAdgvk 239 (671)
.+.+++|++.|+++|.+.--. ......+..+ ..+| -+|.+.+.+.+..++++|||++-
T Consensus 32 ~~~~~al~~gGv~~iel~~k~-----------~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~ 94 (224)
T 1vhc_A 32 LPLADTLAKNGLSVAEITFRS-----------EAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVV 94 (224)
T ss_dssp HHHHHHHHHTTCCEEEEETTS-----------TTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEeccC-----------chHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEE
Confidence 467899999999999663210 0112222211 2233 47888899999999999999993
No 93
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=97.04 E-value=0.0092 Score=61.00 Aligned_cols=198 Identities=11% Similarity=0.072 Sum_probs=107.0
Q ss_pred CcccCceEEecCCCccccHHHHHHHHHcCC--eEE-eecCCC---HH--HHHHhhhcCcccccceEE--e-cCC-ChhhH
Q psy3862 52 KTYQGVPIIAANMDTVGTFEMAKHLAKHGL--FTT-IHKYYT---LE--EWKAFAVQNPDVIKHVAV--S-SGI-SAKDL 119 (671)
Q Consensus 52 ~~~l~~Piv~a~M~~vt~~~lA~Ala~~gg--lgv-Ih~n~~---~E--eq~~~i~~~p~~~~~~~v--~-~G~-~~~d~ 119 (671)
+.+++.-++...-.+-+...|..++...|- +.+ ++|-.. .. ...+++.+ ..+.+ + .|+ +.+|-
T Consensus 15 ~~~f~SRl~~Gtgky~~~~~~~~a~~asg~e~vtva~rR~~~~~~~~~~~~~~~i~~-----~~~~~lpNTag~~ta~eA 89 (265)
T 1wv2_A 15 GRTYGSRLLVGTGKYKDLDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPP-----DRYTILPNTAGCYDAVEA 89 (265)
T ss_dssp TEEESCCEEECCSCSSSHHHHHHHHHHSCCSEEEEEGGGCCC-------------CT-----TTSEEEEECTTCCSHHHH
T ss_pred CEEeecceEEecCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccCCCcchHHhhhhh-----cCCEECCcCCCCCCHHHH
Confidence 555566666655555556677777766653 233 555321 11 11122211 01221 1 233 33333
Q ss_pred HHHHHHHHh-CCCceEEEeeccCCC------ChHHHHHHHHHHHhCCCceEEE-EEeccHHHHHHHHHCCCcEEEECcCC
Q psy3862 120 AGLKEILAA-LPEIEYICLDVANGY------TQTFVDFVRRIREMYPKHVIIA-GNVVTGEMVEELILSGADVIKVGIGP 191 (671)
Q Consensus 120 ~rl~~l~~a-~~~~d~Ivld~a~G~------~~~~~~~ik~lr~~~P~~~li~-g~v~t~e~a~~Li~AGaD~IvVdga~ 191 (671)
-+...+-.+ .-+.++|-+.....+ +...++..+.+.+ .+.++. -...+...+++|.++|+|+|..-+++
T Consensus 90 v~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~---~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~p 166 (265)
T 1wv2_A 90 VRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVK---DGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGL 166 (265)
T ss_dssp HHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHT---TTCEEEEEECSCHHHHHHHHHSCCSEEEECSSS
T ss_pred HHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHH---CCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCcc
Confidence 233233222 225567766544332 2334444444433 233333 24578999999999999999774532
Q ss_pred -CceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcch--hhh
Q psy3862 192 -GSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQ--FSA 263 (671)
Q Consensus 192 -G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~--~~~ 263 (671)
|+. ....+..+++.+. .+| ++|||.|++.++.++++|||||.|| |.+. ....|+ ..+
T Consensus 167 IGsG------~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVg--------SAI~-~a~dP~~ma~a 231 (265)
T 1wv2_A 167 IGSG------LGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMN--------TAIA-HAKDPVMMAEA 231 (265)
T ss_dssp TTCC------CCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEES--------HHHH-TSSSHHHHHHH
T ss_pred CCCC------CCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEC--------hHHh-CCCCHHHHHHH
Confidence 221 0112344444442 355 6999999999999999999999999 5554 456687 555
Q ss_pred HHHHHHHhh
Q psy3862 264 VLECADAAH 272 (671)
Q Consensus 264 ~~~~~~~~~ 272 (671)
..++.++-+
T Consensus 232 f~~Av~aGr 240 (265)
T 1wv2_A 232 MKHAIVAGR 240 (265)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555544433
No 94
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=97.00 E-value=0.0024 Score=69.69 Aligned_cols=84 Identities=19% Similarity=0.176 Sum_probs=52.6
Q ss_pred CC-CceEEEEEec---cHHHHHHHHHCCCcEEEECcCCCc-eEEE-------Eec--ccCC-cchhhhhcc-----ccC-
Q psy3862 158 YP-KHVIIAGNVV---TGEMVEELILSGADVIKVGIGPGS-VCTT-------RLK--NKTS-DFFLIQFYS-----CIP- 216 (671)
Q Consensus 158 ~P-~~~li~g~v~---t~e~a~~Li~AGaD~IvVdga~G~-~~~t-------~v~--~~~~-~~~~i~~i~-----~~p- 216 (671)
.| ...|+..+.. ..+-|+.+.++|+|.|++-.--.. .-+. -++ ..+| ++..+..+. .+|
T Consensus 269 ~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPI 348 (415)
T 3i65_A 269 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPI 348 (415)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCE
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCE
Confidence 46 5667776553 256788999999999987541110 0000 000 0000 112222221 356
Q ss_pred -CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 217 -QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 217 -~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..|||.|++.+..++++|||+|.||
T Consensus 349 Ig~GGI~s~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 349 IASGGIFSGLDALEKIEAGASVCQLY 374 (415)
T ss_dssp EECSSCCSHHHHHHHHHHTEEEEEES
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 6999999999999999999999999
No 95
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.00 E-value=0.02 Score=56.91 Aligned_cols=108 Identities=20% Similarity=0.228 Sum_probs=75.9
Q ss_pred CCChhh-HHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCC
Q psy3862 113 GISAKD-LAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP 191 (671)
Q Consensus 113 G~~~~d-~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~ 191 (671)
+.+.++ .+.++.+++. +++.+-+..- .....+.++.+++.||...+-+|.+.+.++++.++++|||.+...
T Consensus 24 ~~~~~~~~~~~~al~~g--Gv~~iel~~k---~~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p--- 95 (214)
T 1wbh_A 24 VKKLEHAVPMAKALVAG--GVRVLNVTLR---TECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISP--- 95 (214)
T ss_dssp CSSGGGHHHHHHHHHHT--TCCEEEEESC---STTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEES---
T ss_pred CCCHHHHHHHHHHHHHc--CCCEEEEeCC---ChhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcC---
Confidence 344444 3567778887 7777666522 244567888888889987777888888999999999999999642
Q ss_pred CceEEEEecccCCcchhhhhcc--ccC-CccccccHHHHHHHHHcCCCEEEE
Q psy3862 192 GSVCTTRLKNKTSDFFLIQFYS--CIP-QAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 192 G~~~~t~v~~~~~~~~~i~~i~--~~p-~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
+. +.++++... .+| +-| +.|...+..+.++|||-|++
T Consensus 96 ~~-----------d~~v~~~~~~~g~~~i~G-~~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 96 GL-----------TEPLLKAATEGTIPLIPG-ISTVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp SC-----------CHHHHHHHHHSSSCEEEE-ESSHHHHHHHHHTTCCEEEE
T ss_pred CC-----------CHHHHHHHHHhCCCEEEe-cCCHHHHHHHHHCCCCEEEE
Confidence 21 112222221 123 234 99999999999999999988
No 96
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.92 E-value=0.0046 Score=61.19 Aligned_cols=56 Identities=16% Similarity=0.210 Sum_probs=39.1
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccCC-cchhhhhccccC----CccccccHHHHHHHHHcCCCEEE
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTS-DFFLIQFYSCIP----QAGNVVTGEMVEELILSGADVIK 239 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~-~~~~i~~i~~~p----~aGnV~t~~~a~~li~aGAdgvk 239 (671)
.+.+++|++.|+++|.+.- +.+ ....+..+.. | -+|.+.+.+.+..++++|||++-
T Consensus 28 ~~~~~~l~~gGv~~iel~~------------k~~~~~~~i~~~~~-~~~~~gag~vl~~d~~~~A~~~GAd~v~ 88 (207)
T 2yw3_A 28 LGLARVLEEEGVGALEITL------------RTEKGLEALKALRK-SGLLLGAGTVRSPKEAEAALEAGAAFLV 88 (207)
T ss_dssp HHHHHHHHHTTCCEEEEEC------------SSTHHHHHHHHHTT-SSCEEEEESCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEeC------------CChHHHHHHHHHhC-CCCEEEeCeEeeHHHHHHHHHcCCCEEE
Confidence 4778999999999996521 111 1222222222 3 47888899999999999999994
No 97
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.88 E-value=0.0015 Score=65.25 Aligned_cols=60 Identities=22% Similarity=0.295 Sum_probs=40.6
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhc-cccC----CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFY-SCIP----QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i-~~~p----~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.+++|++.|+++|.+.--. ......+..+ ..+| -+|.+.+.+.+..++++|||++-.|
T Consensus 31 ~~~~~al~~gGv~~iel~~k~-----------~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p 95 (214)
T 1wbh_A 31 VPMAKALVAGGVRVLNVTLRT-----------ECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISP 95 (214)
T ss_dssp HHHHHHHHHTTCCEEEEESCS-----------TTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEES
T ss_pred HHHHHHHHHcCCCEEEEeCCC-----------hhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcC
Confidence 367899999999999663210 0112222211 2233 4889999999999999999999533
No 98
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=96.79 E-value=0.0059 Score=67.31 Aligned_cols=82 Identities=21% Similarity=0.221 Sum_probs=49.7
Q ss_pred CceEEEEEec---cHHHHHHHHHCCCcEEEECcCCCce-EEEEeccc---------CC-cchhhhhcc-----ccC--Cc
Q psy3862 160 KHVIIAGNVV---TGEMVEELILSGADVIKVGIGPGSV-CTTRLKNK---------TS-DFFLIQFYS-----CIP--QA 218 (671)
Q Consensus 160 ~~~li~g~v~---t~e~a~~Li~AGaD~IvVdga~G~~-~~t~v~~~---------~~-~~~~i~~i~-----~~p--~a 218 (671)
...++..... ..+-|+.+.++|+|.|++....... -...+... .+ .+.++..+. .+| ..
T Consensus 300 V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~ 379 (443)
T 1tv5_A 300 VFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS 379 (443)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4455554432 1345889999999999885521100 00000000 00 122222221 356 69
Q ss_pred cccccHHHHHHHHHcCCCEEEEc
Q psy3862 219 GNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 219 GnV~t~~~a~~li~aGAdgvkVG 241 (671)
|||-|++.+...+++|||+|.||
T Consensus 380 GGI~s~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 380 GGIFSGLDALEKIEAGASVCQLY 402 (443)
T ss_dssp SSCCSHHHHHHHHHTTEEEEEES
T ss_pred CCCCCHHHHHHHHHcCCCEEEEc
Confidence 99999999999999999999999
No 99
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=96.74 E-value=0.0095 Score=63.47 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=31.5
Q ss_pred CCcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcC
Q psy3862 36 RSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHG 80 (671)
Q Consensus 36 ~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~g 80 (671)
+.+.||++++ -+++|+-||..++-....+.+...++...|
T Consensus 32 ~~~~~L~v~~-----~Gl~f~NPvglAaG~~~~~~e~~~~l~~~G 71 (354)
T 3tjx_A 32 RGSMSLQVNL-----LNNTFANPFMNAAGVMCTTTEELVAMTESA 71 (354)
T ss_dssp -CCCCCCEEE-----TTEEESSSEEECTTSSCSSHHHHHHHHHSS
T ss_pred CCCCceeEEE-----CCEEcCCCcEEccCCCCCCHHHHHHHHHcC
Confidence 4788999999 599999999998754555677777777765
No 100
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.72 E-value=0.014 Score=58.37 Aligned_cols=111 Identities=20% Similarity=0.160 Sum_probs=79.2
Q ss_pred cCCChhhH-HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcC
Q psy3862 112 SGISAKDL-AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIG 190 (671)
Q Consensus 112 ~G~~~~d~-~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga 190 (671)
.+.++++. ..++.+++. +...+-+.. ......+.|+.+++.||...+-+|.|.|.++++.++++|+|+|+.
T Consensus 20 r~~~~~~a~~~a~al~~g--Gi~~iEvt~---~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs--- 91 (217)
T 3lab_A 20 VIDDLVHAIPMAKALVAG--GVHLLEVTL---RTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVS--- 91 (217)
T ss_dssp CCSCGGGHHHHHHHHHHT--TCCEEEEET---TSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEE---
T ss_pred EcCCHHHHHHHHHHHHHc--CCCEEEEeC---CCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEe---
Confidence 34555554 445667776 666654431 134677889999889998777788899999999999999999975
Q ss_pred CCceEEEEecccCCcchhhhhcc--cc------CCccccccHHHHHHHHHcCCCEEEEc
Q psy3862 191 PGSVCTTRLKNKTSDFFLIQFYS--CI------PQAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 191 ~G~~~~t~v~~~~~~~~~i~~i~--~~------p~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
++. +-.+++.+. .+ |.-=|+.|...+..++++|+|.||+=
T Consensus 92 P~~-----------~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 92 PGL-----------TPELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQAGITQLKCF 139 (217)
T ss_dssp SSC-----------CHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHTTCCEEEET
T ss_pred CCC-----------cHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 332 112333332 24 54448899999999999999999873
No 101
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.69 E-value=0.0018 Score=65.08 Aligned_cols=58 Identities=21% Similarity=0.300 Sum_probs=39.7
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhc-cccC----CccccccHHHHHHHHHcCCCEEE
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFY-SCIP----QAGNVVTGEMVEELILSGADVIK 239 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i-~~~p----~aGnV~t~~~a~~li~aGAdgvk 239 (671)
.+.+++|++.|+++|.+.--. ......+..+ ..+| -+|.+.+.+.+..++++|||++-
T Consensus 41 ~~~~~al~~gGv~~iel~~k~-----------~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~ 103 (225)
T 1mxs_A 41 LPLADALAAGGIRTLEVTLRS-----------QHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVV 103 (225)
T ss_dssp HHHHHHHHHTTCCEEEEESSS-----------THHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEE
T ss_pred HHHHHHHHHCCCCEEEEecCC-----------ccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEE
Confidence 467899999999999663210 0011222211 2233 47899999999999999999994
No 102
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=96.65 E-value=0.0096 Score=59.78 Aligned_cols=66 Identities=26% Similarity=0.226 Sum_probs=44.0
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.++.+.++|+|.|.+..-.++.. .....+..+..+. .+| +.|+|-+.+.+..++++|||+|-+|
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~~-----~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDITASVE-----KRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSIN 103 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESSCSSS-----HHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEECCchhhc-----CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 4678889999999987654322210 0001122222221 246 6899999999999999999999887
No 103
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=96.64 E-value=0.042 Score=56.25 Aligned_cols=182 Identities=11% Similarity=0.050 Sum_probs=92.1
Q ss_pred CCcccCceEEecCCCccccHHHHHHHHHcCCeEE-ee--c----CCCHHHHHHhhhcCcccccceEEec-C-CChhhHHH
Q psy3862 51 GKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTT-IH--K----YYTLEEWKAFAVQNPDVIKHVAVSS-G-ISAKDLAG 121 (671)
Q Consensus 51 ~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgv-Ih--~----n~~~Eeq~~~i~~~p~~~~~~~v~~-G-~~~~d~~r 121 (671)
.+.+|+-|++.+.-+.-...++..++.+.|.--+ ++ + |.+.+...+++++ ...++..+. + .+.++..+
T Consensus 7 ~~~~~~~~~~~~t~g~p~~~~~~~~l~~~Gad~ielg~pr~~~~g~~~~~~~~~l~~---~~~~~~pn~~~~~~~~~~~~ 83 (264)
T 1xm3_A 7 GGKSFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAVRRMNIFEASQPNFLEQLDL---SKYTLLPNTAGASTAEEAVR 83 (264)
T ss_dssp TTEEESCCEEEECSCSSCHHHHHHHHHHHTCSEEEEETTSSTTC-------CTTCCG---GGSEEEEECTTCSSHHHHHH
T ss_pred CCEEecCCCEEEecCCCCHHHHHHHHHHcCCeEEEEcccccccCCCCHHHHHHHHHh---cCCeEcCCccccCCHHHHHH
Confidence 4788999999886666555666778888774322 33 1 2222222222211 111111121 2 23333223
Q ss_pred HHHHHHhCCCceEEEeeccCCC---ChHHHHHHHHHHHhC-CCceEEEEEeccHHHHHHHHHCCCcEEEECcCC-CceEE
Q psy3862 122 LKEILAALPEIEYICLDVANGY---TQTFVDFVRRIREMY-PKHVIIAGNVVTGEMVEELILSGADVIKVGIGP-GSVCT 196 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~G~---~~~~~~~ik~lr~~~-P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~-G~~~~ 196 (671)
..++.....+.+++.++..... .....+.++..++.. |...++.-...+.++++++.++|+|+|+.-++. |+.
T Consensus 84 f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~-- 161 (264)
T 1xm3_A 84 IARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSG-- 161 (264)
T ss_dssp HHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCC--
T ss_pred HHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCC--
Confidence 3233332223345544433211 122233344333321 222333233457789999999999999442211 111
Q ss_pred EEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 197 TRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 197 t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+ ...+...++.+. .+| +.|||.|.+.++.++++|||||-||
T Consensus 162 ~----~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVG 207 (264)
T 1xm3_A 162 Q----GILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLN 207 (264)
T ss_dssp C----CCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred C----CCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEc
Confidence 0 011122333332 456 5889999999999999999999999
No 104
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.62 E-value=0.015 Score=60.13 Aligned_cols=63 Identities=17% Similarity=0.184 Sum_probs=40.7
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.|+...++||++|.+=.-++.- ..++..+..+. .+| .-+-+.|..++..+.++|||+|-+|
T Consensus 75 ~~~A~~y~~~GA~~isvltd~~~f--------~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi 142 (272)
T 3qja_A 75 AKLAQAYQDGGARIVSVVTEQRRF--------QGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLI 142 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCGGGH--------HHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEecChhhc--------CCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEe
Confidence 478888999999999652211100 00111122221 345 3556789999999999999999988
No 105
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.60 E-value=0.0087 Score=59.38 Aligned_cols=68 Identities=24% Similarity=0.189 Sum_probs=44.4
Q ss_pred ccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 169 VTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 169 ~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
...+.++.+.++|+|.|.+..-.++. ......+..+..+. .+| +.|++.+.+.+..++++|||+|-+|
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~-----~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~ 106 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAP-----EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVN 106 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCT-----TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccc-----cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 34688899999999988664311110 00000112222221 246 6899999999999999999999988
No 106
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=96.52 E-value=0.0027 Score=63.48 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=45.1
Q ss_pred cHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 170 TGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 170 t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+.++.+.++|+|.|-++.-.|+- .. .+....+..+. .+| +.|+|-+.+.+..++++|||+|-+|
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~-----~~-~~~~~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAF-----GR-GSNHELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVG 103 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHT-----TS-CCCHHHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccc-----cC-CChHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3578889999999999876422210 00 01112222231 356 6899999999999999999999888
No 107
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.52 E-value=0.026 Score=56.95 Aligned_cols=102 Identities=20% Similarity=0.214 Sum_probs=73.5
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEe
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRL 199 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v 199 (671)
+.++.+++. ++..+-+..- ..+..+.++.+++.+|...+-+|.+.+.++++.++++|||+|+. ++.
T Consensus 50 ~~a~al~~g--Gi~~iEvt~~---t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvs---P~~------ 115 (232)
T 4e38_A 50 PLGKVLAEN--GLPAAEITFR---SDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVS---PGF------ 115 (232)
T ss_dssp HHHHHHHHT--TCCEEEEETT---STTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEEC---SSC------
T ss_pred HHHHHHHHC--CCCEEEEeCC---CCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEe---CCC------
Confidence 445667776 6666554311 24457888888888998777778889999999999999999964 321
Q ss_pred cccCCcchhhhhcc--ccCCccccccHHHHHHHHHcCCCEEEE
Q psy3862 200 KNKTSDFFLIQFYS--CIPQAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 200 ~~~~~~~~~i~~i~--~~p~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
+..+++.+. .+|.-=|+.|...+..++++|||.||+
T Consensus 116 -----~~~vi~~~~~~gi~~ipGv~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 116 -----NPNTVRACQEIGIDIVPGVNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp -----CHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEE
T ss_pred -----CHHHHHHHHHcCCCEEcCCCCHHHHHHHHHcCCCEEEE
Confidence 222333332 245323588999999999999999998
No 108
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=96.43 E-value=0.0068 Score=60.70 Aligned_cols=65 Identities=15% Similarity=0.149 Sum_probs=44.3
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.++.+.++|+|.|-++.-.|+. ...... ..+..+. .+| +.|+|.|.+.+..++++|||+|-+|
T Consensus 35 ~~~a~~~~~~Gad~i~v~~~d~~~-----~~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg 104 (244)
T 1vzw_A 35 LEAALAWQRSGAEWLHLVDLDAAF-----GTGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLG 104 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHH-----TSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEecCchhh-----cCCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 577889999999999775422210 000011 2222221 356 6899999999999999999999877
No 109
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=96.30 E-value=0.0048 Score=62.13 Aligned_cols=66 Identities=26% Similarity=0.328 Sum_probs=45.8
Q ss_pred ccHHHHHHHHHCCCcEEEECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 169 VTGEMVEELILSGADVIKVGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 169 ~t~e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
...+.++.+.++|+|.|.+-. +.+. ...+++.++..+. .+| +.|||.|.+.+..++++|||+|-+|
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~-------~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGT-------KSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSIN 108 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTC-------SSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCS
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccC-------CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehh
Confidence 346889999999999996522 1110 0112333333332 356 6999999999999999999999877
No 110
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=96.22 E-value=0.029 Score=56.16 Aligned_cols=64 Identities=27% Similarity=0.266 Sum_probs=42.9
Q ss_pred HHHHHHHHHCCCcEEEEC-c-CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVG-I-GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVd-g-a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.++.+.++|+|.|.+- . +.+.. ....+.++..+. .+| +.|++.|.+.+..++++|||+|-+|
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~~~~-------~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg 104 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISATHEE-------RAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVN 104 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSSTTC-------HHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEEcCCccccC-------ccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 577888999999987552 1 11110 001122222221 356 6899999999999999999999888
No 111
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=96.20 E-value=0.012 Score=60.69 Aligned_cols=125 Identities=16% Similarity=0.108 Sum_probs=74.4
Q ss_pred CCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcc-cccceeeecc-cChhhHHHHHHcCCcEEEEcccccccccc
Q psy3862 341 DTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPD-VIKHVADGGC-TSPGDVAKAMGAGADFVMLGGMFAGHDQS 418 (671)
Q Consensus 341 DtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~-~~~~v~~~~~-~~~~~~~~l~~aG~d~i~id~~a~gh~~~ 418 (671)
..-+..+++..+++.|.=|+|=--.++||..++....++ -+..+.-..- ++++++.++.+.+.+|+... +..|+.-.
T Consensus 110 ~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~v-s~~GvTG~ 188 (271)
T 3nav_A 110 YARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLL-SRAGVTGA 188 (271)
T ss_dssp HHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEEC-CCC-----
T ss_pred HHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEE-eccCCCCc
Confidence 344567899999999999988777777764444432221 1223333333 34578888888888998875 44444311
Q ss_pred ccccccccccccccccccccccC-ceeeccccCchhHHH-HHHcCCcEEEECc
Q psy3862 419 GGELTNIEYMFFPLVGDMNSYLG-GVVDGGCTSPGDVAK-AMGAGADFVMLGG 469 (671)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~-~~i~gG~v~t~~~a~-~l~aGAd~V~vG~ 469 (671)
.-.. .......+..+|++.. .+++|+-+.+.+.++ ++.+|||+|.||.
T Consensus 189 ~~~~---~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGS 238 (271)
T 3nav_A 189 ETKA---NMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGS 238 (271)
T ss_dssp ---C---CHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEESH
T ss_pred ccCC---chhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 1100 0111123444555543 255566577788877 8999999999994
No 112
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=96.18 E-value=0.14 Score=49.85 Aligned_cols=101 Identities=18% Similarity=0.243 Sum_probs=63.7
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEE-EEeccHHHHHHHHHCCCcEEEECcCCCceEEEE
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIA-GNVVTGEMVEELILSGADVIKVGIGPGSVCTTR 198 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~-g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~ 198 (671)
+.++.+.+. +++.+.+.... ....+.++++++.+|.-.+++ |.+.+.+.++.++++|+|.|.+...
T Consensus 23 ~~~~~~~~~--G~~~i~l~~~~---~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~~-------- 89 (212)
T 2v82_A 23 AHVGAVIDA--GFDAVEIPLNS---PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPNI-------- 89 (212)
T ss_dssp HHHHHHHHH--TCCEEEEETTS---TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSSC--------
T ss_pred HHHHHHHHC--CCCEEEEeCCC---hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCCC--------
Confidence 345566666 77888776543 223456666665565434443 4566788999999999999964221
Q ss_pred ecccCCcchhhhhccc--cC-CccccccHHHHHHHHHcCCCEEEE
Q psy3862 199 LKNKTSDFFLIQFYSC--IP-QAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 199 v~~~~~~~~~i~~i~~--~p-~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
+..+++.+.. .+ ..| +.|.+.+..+.++|+|.|.+
T Consensus 90 ------~~~~~~~~~~~g~~~~~g-~~t~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 90 ------HSEVIRRAVGYGMTVCPG-CATATEAFTALEAGAQALKI 127 (212)
T ss_dssp ------CHHHHHHHHHTTCEEECE-ECSHHHHHHHHHTTCSEEEE
T ss_pred ------CHHHHHHHHHcCCCEEee-cCCHHHHHHHHHCCCCEEEE
Confidence 1112222211 11 344 78889999999999999875
No 113
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.08 E-value=0.025 Score=55.60 Aligned_cols=27 Identities=22% Similarity=0.555 Sum_probs=20.3
Q ss_pred eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 443 VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 443 ~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
+.+||+....++.+++.+|||+|.+|.
T Consensus 179 ia~GGI~~~~~~~~~~~~Gad~v~vG~ 205 (223)
T 1y0e_A 179 IAEGNVITPDMYKRVMDLGVHCSVVGG 205 (223)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred EEecCCCCHHHHHHHHHcCCCEEEECh
Confidence 456775466666668899999999985
No 114
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.95 E-value=0.021 Score=58.92 Aligned_cols=108 Identities=19% Similarity=0.130 Sum_probs=64.9
Q ss_pred HHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecc
Q psy3862 122 LKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKN 201 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~ 201 (671)
+.+.... ++|.|++-.+--....+.++++..++ + +..+...+.+.+.++.+.++|+|+|-+.....+.
T Consensus 128 v~~A~~~--GAD~VlLi~a~l~~~~l~~l~~~a~~-l--Gl~~lvev~t~ee~~~A~~~Gad~IGv~~r~l~~------- 195 (272)
T 3qja_A 128 IHEARAH--GADMLLLIVAALEQSVLVSMLDRTES-L--GMTALVEVHTEQEADRALKAGAKVIGVNARDLMT------- 195 (272)
T ss_dssp HHHHHHT--TCSEEEEEGGGSCHHHHHHHHHHHHH-T--TCEEEEEESSHHHHHHHHHHTCSEEEEESBCTTT-------
T ss_pred HHHHHHc--CCCEEEEecccCCHHHHHHHHHHHHH-C--CCcEEEEcCCHHHHHHHHHCCCCEEEECCCcccc-------
Confidence 4444455 88888774331112333344443333 2 2222335678888988889999999775422211
Q ss_pred cCCcch----hhhhcc-ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 202 KTSDFF----LIQFYS-CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 202 ~~~~~~----~i~~i~-~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+++. +.+.+. .+| +.|||.|.+.++.+.++||||+-||
T Consensus 196 ~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVG 242 (272)
T 3qja_A 196 LDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVG 242 (272)
T ss_dssp CCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred cccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 001111 112221 234 7999999999999999999999999
No 115
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=95.95 E-value=0.032 Score=55.15 Aligned_cols=144 Identities=13% Similarity=0.085 Sum_probs=82.2
Q ss_pred HHHHHHHHHcCCeEEeecC--CC-HHHHHHhhhcCcccccceEEecCCChhhHHHHHHHHHhCCCceEEEeeccCCCChH
Q psy3862 70 FEMAKHLAKHGLFTTIHKY--YT-LEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQT 146 (671)
Q Consensus 70 ~~lA~Ala~~gglgvIh~n--~~-~Eeq~~~i~~~p~~~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~ 146 (671)
.+++.++ ..||+.++--. .+ ..+..+..++ |+ ..+..|+ .-+.++++..+.+ ++++++.. +....
T Consensus 28 ~~~~~~l-~~gGv~~iel~~k~~~~~~~i~~~~~-~~----~~~gag~-vl~~d~~~~A~~~--GAd~v~~~---~~d~~ 95 (207)
T 2yw3_A 28 LGLARVL-EEEGVGALEITLRTEKGLEALKALRK-SG----LLLGAGT-VRSPKEAEAALEA--GAAFLVSP---GLLEE 95 (207)
T ss_dssp HHHHHHH-HHTTCCEEEEECSSTHHHHHHHHHTT-SS----CEEEEES-CCSHHHHHHHHHH--TCSEEEES---SCCHH
T ss_pred HHHHHHH-HHcCCCEEEEeCCChHHHHHHHHHhC-CC----CEEEeCe-EeeHHHHHHHHHc--CCCEEEcC---CCCHH
Confidence 5667654 45677654322 11 2233344444 32 2223343 2234777777777 88888754 22344
Q ss_pred HHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCC---CceEEEEecccCCcchhhhhccccC--Ccccc
Q psy3862 147 FVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP---GSVCTTRLKNKTSDFFLIQFYSCIP--QAGNV 221 (671)
Q Consensus 147 ~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~---G~~~~t~v~~~~~~~~~i~~i~~~p--~aGnV 221 (671)
+.+..++ ..+ .++.| +.|.+.+..+.++|+|+|.+-.+. |....+.++..+| .+| +.|||
T Consensus 96 v~~~~~~---~g~--~~i~G-~~t~~e~~~A~~~Gad~v~~fpa~~~gG~~~lk~l~~~~~---------~ipvvaiGGI 160 (207)
T 2yw3_A 96 VAALAQA---RGV--PYLPG-VLTPTEVERALALGLSALKFFPAEPFQGVRVLRAYAEVFP---------EVRFLPTGGI 160 (207)
T ss_dssp HHHHHHH---HTC--CEEEE-ECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHHHCT---------TCEEEEBSSC
T ss_pred HHHHHHH---hCC--CEEec-CCCHHHHHHHHHCCCCEEEEecCccccCHHHHHHHHhhCC---------CCcEEEeCCC
Confidence 4444443 221 24444 678888999999999999883311 1111111111111 234 69999
Q ss_pred ccHHHHHHHHHcCCCEEEEc
Q psy3862 222 VTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 222 ~t~~~a~~li~aGAdgvkVG 241 (671)
. .+.+.+++++||+++-||
T Consensus 161 ~-~~n~~~~l~aGa~~vavg 179 (207)
T 2yw3_A 161 K-EEHLPHYAALPNLLAVGG 179 (207)
T ss_dssp C-GGGHHHHHTCSSBSCEEE
T ss_pred C-HHHHHHHHhCCCcEEEEe
Confidence 6 589999999999999887
No 116
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=95.81 E-value=0.012 Score=60.30 Aligned_cols=199 Identities=14% Similarity=0.077 Sum_probs=102.9
Q ss_pred CcccCceEEecCCCccccHHHHHHHHHcCC--eEE-eecCCC--H--HHHHHhhhcCcccccceEEecCC-ChhhHHHHH
Q psy3862 52 KTYQGVPIIAANMDTVGTFEMAKHLAKHGL--FTT-IHKYYT--L--EEWKAFAVQNPDVIKHVAVSSGI-SAKDLAGLK 123 (671)
Q Consensus 52 ~~~l~~Piv~a~M~~vt~~~lA~Ala~~gg--lgv-Ih~n~~--~--Eeq~~~i~~~p~~~~~~~v~~G~-~~~d~~rl~ 123 (671)
+.+++.-++...-.+-+...|..++...|- +.+ ++|-.. . +...+++.+.+ .-|- -.|+ +.+|..++.
T Consensus 8 ~~~~~srl~~Gtgky~~~~~~~~ai~asg~eivtva~rR~~~~~~~~~~~~~~i~~~~--~lpn--taG~~taeeAv~~a 83 (268)
T 2htm_A 8 PVELKSRLILGSGKYEDFGVMREAIAAAKAEVVTVSVRRVELKAPGHVGLLEALEGVR--LLPN--TAGARTAEEAVRLA 83 (268)
T ss_dssp TEEECCSEEEECSSCSCHHHHHHHHHHTTCSEEEEEEEECC-------CHHHHTTTSE--EEEB--CTTCCSHHHHHHHH
T ss_pred CEEeecceEEecCCCCCHHHHHHHHHHhCCCEEEEEccccCCCCCCcccHHHHHhhhh--ccCc--ccCCCCHHHHHHHH
Confidence 444555566554445556678887777663 233 555321 1 11223332111 0000 1233 344444433
Q ss_pred HHHHhCCCceEEEeeccCCC------ChHHHHHHHHHHHhCCCceEEE-EEeccHHHHHHHHHCCCcEEEECcCC-CceE
Q psy3862 124 EILAALPEIEYICLDVANGY------TQTFVDFVRRIREMYPKHVIIA-GNVVTGEMVEELILSGADVIKVGIGP-GSVC 195 (671)
Q Consensus 124 ~l~~a~~~~d~Ivld~a~G~------~~~~~~~ik~lr~~~P~~~li~-g~v~t~e~a~~Li~AGaD~IvVdga~-G~~~ 195 (671)
++-...-+.+.+-++....+ +...++..+.+.+. +..+. -...+.+.+++|.++|+|+|.--++. |+..
T Consensus 84 ~lare~~gt~~iKlEvi~d~~~l~pD~~~tv~aa~~L~k~---Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~ 160 (268)
T 2htm_A 84 RLGRLLTGERWVKLEVIPDPTYLLPDPLETLKAAERLIEE---DFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIGSGW 160 (268)
T ss_dssp HHHHHHHCCSEEBCCCCSCTTTTCCCHHHHHHHHHHHHHT---TCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTTTCC
T ss_pred HhhhHhcCcceeeeeeccCccccCcCHHHHHHHHHHHHHC---CCEEeeccCCCHHHHHHHHhcCCCEEEecCccCcCCc
Confidence 32111113445444333221 23444555555442 22211 12467899999999999999653431 2210
Q ss_pred EEEecccCCcchhhhhc-c---c-cC--CccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcch--hhhHHH
Q psy3862 196 TTRLKNKTSDFFLIQFY-S---C-IP--QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQ--FSAVLE 266 (671)
Q Consensus 196 ~t~v~~~~~~~~~i~~i-~---~-~p--~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~--~~~~~~ 266 (671)
.+ .+.+.++.+ . . +| ++|||.|++.++.++++|||||-|| |.+. ....|. ..+..+
T Consensus 161 --Gi----~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVg--------SAI~-~a~dP~~ma~af~~ 225 (268)
T 2htm_A 161 --GV----RTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVN--------TAIA-EAQDPPAMAEAFRL 225 (268)
T ss_dssp --CS----TTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEES--------HHHH-TSSSHHHHHHHHHH
T ss_pred --cc----CCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC--------hHHh-CCCCHHHHHHHHHH
Confidence 01 111122222 1 2 55 6999999999999999999999999 6554 446686 666666
Q ss_pred HHHHhh
Q psy3862 267 CADAAH 272 (671)
Q Consensus 267 ~~~~~~ 272 (671)
+.++-+
T Consensus 226 Av~agr 231 (268)
T 2htm_A 226 AVEAGR 231 (268)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 117
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=95.55 E-value=0.03 Score=55.93 Aligned_cols=65 Identities=23% Similarity=0.187 Sum_probs=44.1
Q ss_pred cHHHHHHHHHCCCcEEEECc--CCCceEEEEecccCCcchhhhhcc--ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 170 TGEMVEELILSGADVIKVGI--GPGSVCTTRLKNKTSDFFLIQFYS--CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 170 t~e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~~~~~~~~~i~~i~--~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+.++.+.++|+|.|.+-. +.+. ....++..+..+. .+| +.|++-+.+.+..++++|||+|-+|
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~-------~~~~~~~~i~~i~~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg 102 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVDLSNAIE-------NSGENLPVLEKLSEFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVS 102 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEEHHHHHH-------CCCTTHHHHHHGGGGGGGEEEESSCCSHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEeccccccc-------CCchhHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHCCCCEEEEC
Confidence 35788999999999996521 0000 0112233333221 346 6899999999999999999999888
No 118
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.55 E-value=0.045 Score=54.37 Aligned_cols=66 Identities=20% Similarity=0.125 Sum_probs=35.0
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc-ccCCcccc---ccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS-CIPQAGNV---VTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~-~~p~aGnV---~t~~~a~~li~aGAdgvkVG 241 (671)
.+.++++.++|++.|.+++. ..+..+++.. +++++..+. .+| .+.+ .+.+.+..++++|||.|-++
T Consensus 39 ~~~a~~~~~~G~~~i~~~~~---~~i~~i~~~~-~~p~i~~~~~~~~-~~~~~i~~~~~~i~~~~~~Gad~V~l~ 108 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRANSV---RDIKEIQAIT-DLPIIGIIKKDYP-PQEPFITATMTEVDQLAALNIAVIAMD 108 (234)
T ss_dssp HHHHHHHHHHTCSEEEEESH---HHHHHHHTTC-CSCEEEECBCCCT-TSCCCBSCSHHHHHHHHTTTCSEEEEE
T ss_pred HHHHHHHHHCCCcEeecCCH---HHHHHHHHhC-CCCEEeeEcCCCC-ccccccCChHHHHHHHHHcCCCEEEEc
Confidence 35778888899999976521 0111122111 111110000 111 1112 25688999999999999776
No 119
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=95.53 E-value=0.0033 Score=65.83 Aligned_cols=115 Identities=17% Similarity=0.173 Sum_probs=72.9
Q ss_pred HHHHHHHHHhCCCceEEEeeccCCC-ChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceE--
Q psy3862 119 LAGLKEILAALPEIEYICLDVANGY-TQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVC-- 195 (671)
Q Consensus 119 ~~rl~~l~~a~~~~d~Ivld~a~G~-~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~-- 195 (671)
.+.++.+..+ ++|.| +.+.+. +..+ ++.+++.++...+++. +.+.+.+++++++|+|+|.+.+..|+..
T Consensus 90 ide~qil~aa--GAD~I--d~s~~~~~~~l---i~~i~~~~~g~~vvv~-v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~ 161 (297)
T 4adt_A 90 FVEAQILEEL--KVDML--DESEVLTMADE---YNHINKHKFKTPFVCG-CTNLGEALRRISEGASMIRTKGEAGTGNII 161 (297)
T ss_dssp HHHHHHHHHT--TCSEE--EEETTSCCSCS---SCCCCGGGCSSCEEEE-ESSHHHHHHHHHHTCSEEEECCCTTSCCCH
T ss_pred HHHHHHHHHc--CCCEE--EcCCCCCHHHH---HHHHHhcCCCCeEEEE-eCCHHHHHHHHhCCCCEEEECCCcCCCchH
Confidence 4555555566 78887 544431 2222 2333333444555664 6788888889999999999987545320
Q ss_pred --EEE-------e---------------cccCCcchhhhhcc---ccC----CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 196 --TTR-------L---------------KNKTSDFFLIQFYS---CIP----QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 196 --~t~-------v---------------~~~~~~~~~i~~i~---~~p----~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+.+ + .+..+++.++..+. .+| +.|||.|.+.+..++++|||||-||
T Consensus 162 ~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVG 238 (297)
T 4adt_A 162 EAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMDGVFVG 238 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCSCEEES
T ss_pred HHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCCEEEEh
Confidence 000 0 01123455555443 245 3899999999999999999999999
No 120
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=95.48 E-value=0.063 Score=55.90 Aligned_cols=72 Identities=21% Similarity=0.203 Sum_probs=40.7
Q ss_pred CCCceEEEEEeccHHHHHHHHHCCCcEE-EEC-----c--CCCceEEEEecccCCcchhhhhcc---ccCCcccccc--H
Q psy3862 158 YPKHVIIAGNVVTGEMVEELILSGADVI-KVG-----I--GPGSVCTTRLKNKTSDFFLIQFYS---CIPQAGNVVT--G 224 (671)
Q Consensus 158 ~P~~~li~g~v~t~e~a~~Li~AGaD~I-vVd-----g--a~G~~~~t~v~~~~~~~~~i~~i~---~~p~aGnV~t--~ 224 (671)
.+.+.++ +....+.++.+.++|+|+| +++ . ..|.. ...+...+..+. .+|+-+++-. .
T Consensus 20 ~~~g~i~--~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~-------~~~~~~~i~~I~~~~~iPv~~k~r~g~~ 90 (305)
T 2nv1_A 20 QKGGVIM--DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVA-------RMADPTIVEEVMNAVSIPVMAKARIGHI 90 (305)
T ss_dssp TTTCEEE--EESSHHHHHHHHHTTCSEEEECCC-------CCCCC-------CCCCHHHHHHHHHHCSSCEEEEECTTCH
T ss_pred ccCCeee--cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcc-------cCCCHHHHHHHHHhCCCCEEecccccch
Confidence 4444333 5567799999999999999 664 1 11110 011222222221 3564444433 5
Q ss_pred HHHHHHHHcCCCEE
Q psy3862 225 EMVEELILSGADVI 238 (671)
Q Consensus 225 ~~a~~li~aGAdgv 238 (671)
+.+..+.++|||+|
T Consensus 91 ~~~~~~~a~GAd~V 104 (305)
T 2nv1_A 91 VEARVLEAMGVDYI 104 (305)
T ss_dssp HHHHHHHHHTCSEE
T ss_pred HHHHHHHHCCCCEE
Confidence 66677777888888
No 121
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=95.26 E-value=0.034 Score=73.80 Aligned_cols=134 Identities=20% Similarity=0.231 Sum_probs=72.9
Q ss_pred ccccHHHHHHHHHcCCCEEEEcccCCCcccc---ceecccCcchhhh--HHHHHHHhhhcCCcchhhhhhccceeecccc
Q psy3862 220 NVVTGEMVEELILSGADVIKVGIGPGSVCTT---RLKTGVGYPQFSA--VLECADAAHGLGGHIISFLTAMAQKIINDIK 294 (671)
Q Consensus 220 nV~t~~~a~~li~aGAdgvkVG~~~~~~~~T---r~V~gv~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 294 (671)
-|-=.+....+.+.|++-+ |=+|||.++|. |..-|.|..-+++ .-+-.+ +++.. .. ....
T Consensus 333 PV~W~~~v~~l~~~Gv~~f-iEiGPG~vL~~L~k~i~~g~gv~~v~~~t~~~~~~-----------l~~~~-~~--~~~~ 397 (3089)
T 3zen_D 333 QVDWVDEITELHEAGARWI-LDLGPGDILTRLTAPVIRGLGIGIVPAATRGGQRN-----------LFTVG-AV--PEVA 397 (3089)
T ss_dssp CBCCHHHHHHHHTTTCCEE-EECSSSSCSHHHHHHHHGGGSCEEEETTCHHHHHH-----------HTCSS-SC--CCCC
T ss_pred cEeHHHHHHHHHHCCCCEE-EEECCchHHHHHHHHHcCCCCceEEecCChhhHHH-----------HhCCC-CC--CCCC
Confidence 3444566778888999866 88999998852 3333333322211 111111 01110 00 0122
Q ss_pred CCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCC-CCCHHHHHHHHHcCCeEEE-ccC-CCHHHHH
Q psy3862 295 LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDT-VGTFEMAKHLAKHGLFTTI-HKY-YTLEEWK 371 (671)
Q Consensus 295 l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDt-V~~~~mA~~la~~Gglgvi-hr~-~~~e~~~ 371 (671)
-++++ ..|+-..... ..+-+.++|+- .+- ..|||.++|-. +.+++||.+.++.||||+| --. .++|...
T Consensus 398 ~~W~~--f~P~l~~~~~-g~~~~~t~~~~----~lg-~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~g~~~~~~l~ 469 (3089)
T 3zen_D 398 RPWSS--YAPTVVKLPD-GSVKLETKFTR----LTG-RSPILLAGMTPTTVDAKIVAAAANAGHWAELAGGGQVTEQIFN 469 (3089)
T ss_dssp CCGGG--GCCEEEECTT-CCEEEECHHHH----HHS-SCSEEECCCHHHHTSHHHHHHHHHTTCEEEECSTTCCSHHHHH
T ss_pred CCccc--cCCcccccCC-Ccccccchhhh----hcC-CCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCCCCCCHHHHH
Confidence 33332 2232211111 22234444431 111 68999999995 4599999999999999999 333 4777766
Q ss_pred HHHhc
Q psy3862 372 AFAVQ 376 (671)
Q Consensus 372 ~~v~~ 376 (671)
+++++
T Consensus 470 ~~i~~ 474 (3089)
T 3zen_D 470 DRIAE 474 (3089)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 122
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=95.17 E-value=0.013 Score=60.41 Aligned_cols=128 Identities=23% Similarity=0.186 Sum_probs=79.6
Q ss_pred HHHHHHHHHhCCCceEEEeeccCCC-ChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCce-E-
Q psy3862 119 LAGLKEILAALPEIEYICLDVANGY-TQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSV-C- 195 (671)
Q Consensus 119 ~~rl~~l~~a~~~~d~Ivld~a~G~-~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~-~- 195 (671)
+..++.+..+ ++|+| |..... +. +.+..+.+..+..+.+|+. .+.+.|.+.++.|+|.|..-+..|+. .
T Consensus 80 ~~EAqilea~--GaD~I--Desevltpa---d~~~~I~k~~f~vpfv~~~-~~l~EAlrri~eGA~mIrTtge~gtg~v~ 151 (291)
T 3o07_A 80 FVEAQIIEAL--EVDYI--DESEVLTPA---DWTHHIEKDKFKVPFVCGA-KDLGEALRRINEGAAMIRTKGEAGTGDVS 151 (291)
T ss_dssp HHHHHHHHHT--TCSEE--EEETTSCCS---CSSCCCCGGGCSSCEEEEE-SSHHHHHHHHHHTCSEEEECCCTTSCCTH
T ss_pred HHHHHHHHHc--CCCEE--ecccCCCHH---HHHHHhhhhcCCCcEEeeC-CCHHHHHHHHHCCCCEEEecCcCCCccHH
Confidence 4555556555 77877 655322 11 1112222222344566655 67788888899999999988766653 0
Q ss_pred --EE----------E---e----------cccCCcchhhhhcc---ccCC----ccccccHHHHHHHHHcCCCEEEEccc
Q psy3862 196 --TT----------R---L----------KNKTSDFFLIQFYS---CIPQ----AGNVVTGEMVEELILSGADVIKVGIG 243 (671)
Q Consensus 196 --~t----------~---v----------~~~~~~~~~i~~i~---~~p~----aGnV~t~~~a~~li~aGAdgvkVG~~ 243 (671)
.+ . + ++..+++.++..++ .+|+ .|||.|.+.++.++++|||||-||
T Consensus 152 ~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVG-- 229 (291)
T 3o07_A 152 EAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVG-- 229 (291)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEEC--
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEc--
Confidence 00 0 1 01124555555553 3573 599999999999999999999999
Q ss_pred CCCccccceecccCcchhhh
Q psy3862 244 PGSVCTTRLKTGVGYPQFSA 263 (671)
Q Consensus 244 ~~~~~~Tr~V~gv~~~~~~~ 263 (671)
|-++....|+..+
T Consensus 230 -------rAI~~s~DP~~~A 242 (291)
T 3o07_A 230 -------SGIFKSSNPVRLA 242 (291)
T ss_dssp -------GGGGGSSCHHHHH
T ss_pred -------hHHhCCCCHHHHH
Confidence 3355556676543
No 123
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=95.09 E-value=0.1 Score=51.93 Aligned_cols=71 Identities=21% Similarity=0.269 Sum_probs=42.3
Q ss_pred hhHHHHHHc--CCcEEEEccccccccccccccccccccccccccccccccCc---eeeccccCchhHHHHHHcCCcEEEE
Q psy3862 393 GDVAKAMGA--GADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGG---VVDGGCTSPGDVAKAMGAGADFVML 467 (671)
Q Consensus 393 ~~~~~l~~a--G~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~gG~v~t~~~a~~l~aGAd~V~v 467 (671)
+.+..+.+. ++|++.++.+..|.+..... ......+..+++..++ .++|| +...++.+++.+|||++.|
T Consensus 127 e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~-----~~~l~~i~~~~~~~~~~pi~v~GG-I~~~ni~~~~~aGaD~vvv 200 (228)
T 1h1y_A 127 EEVFPLVEAENPVELVLVMTVEPGFGGQKFM-----PEMMEKVRALRKKYPSLDIEVDGG-LGPSTIDVAASAGANCIVA 200 (228)
T ss_dssp GGGHHHHHSSSCCSEEEEESSCTTCSSCCCC-----GGGHHHHHHHHHHCTTSEEEEESS-CSTTTHHHHHHHTCCEEEE
T ss_pred HHHHHHHhcCCCCCEEEEEeecCCCCcccCC-----HHHHHHHHHHHHhcCCCCEEEECC-cCHHHHHHHHHcCCCEEEE
Confidence 555666666 99999998444344322111 1111122333443322 45677 5777777888999999999
Q ss_pred Cc
Q psy3862 468 GG 469 (671)
Q Consensus 468 G~ 469 (671)
|.
T Consensus 201 Gs 202 (228)
T 1h1y_A 201 GS 202 (228)
T ss_dssp SH
T ss_pred CH
Confidence 85
No 124
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=95.02 E-value=4.3 Score=44.65 Aligned_cols=281 Identities=13% Similarity=0.052 Sum_probs=142.4
Q ss_pred HHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEec
Q psy3862 121 GLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLK 200 (671)
Q Consensus 121 rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~ 200 (671)
.+.+...+ ++|+|.++.+-=....+.++++..++. +..+-.-+.|.+.+++++++|+|+|-+.- +-++
T Consensus 122 Qi~ea~~~--GAD~ILLi~a~l~~~~l~~l~~~a~~l---gm~~LvEvh~~eE~~~A~~lga~iIGinn-------r~L~ 189 (452)
T 1pii_A 122 QIYLARYY--QADACLLMLSVLDDDQYRQLAAVAHSL---EMGVLTEVSNEEEQERAIALGAKVVGINN-------RDLR 189 (452)
T ss_dssp HHHHHHHT--TCSEEEEETTTCCHHHHHHHHHHHHHT---TCEEEEEECSHHHHHHHHHTTCSEEEEES-------EETT
T ss_pred HHHHHHHc--CCCEEEEEcccCCHHHHHHHHHHHHHc---CCeEEEEeCCHHHHHHHHHCCCCEEEEeC-------CCCC
Confidence 34445555 889988886631123444455444442 23333357889999999999999993311 0111
Q ss_pred ccCCc----chhhhhcc-ccC--CccccccHHHHHHHHHcCCCEEEEccc---CCCc---ccc-----ceecccCcchhh
Q psy3862 201 NKTSD----FFLIQFYS-CIP--QAGNVVTGEMVEELILSGADVIKVGIG---PGSV---CTT-----RLKTGVGYPQFS 262 (671)
Q Consensus 201 ~~~~~----~~~i~~i~-~~p--~aGnV~t~~~a~~li~aGAdgvkVG~~---~~~~---~~T-----r~V~gv~~~~~~ 262 (671)
...++ ..+++.+. .++ .-|||-|.+.++.+.++ |||+-||=. +..+ +.. -.+||+-+|+
T Consensus 190 t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~~d~~~~~~~l~~~~~KICGit~~e-- 266 (452)
T 1pii_A 190 DLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQ-- 266 (452)
T ss_dssp TTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTCSCHHHHHHHHHHCSCEECCCCSHH--
T ss_pred CCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCCcCHHHHHHHHHHHhccccCCCcHH--
Confidence 11112 12222221 122 69999999999999999 999999932 1110 000 0255665553
Q ss_pred hHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccce--eeeeeccCCceeeCcceEecCC
Q psy3862 263 AVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDIT--RTFTFRNSGKTYQGVPIIAANM 340 (671)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~--~~l~~~~s~~~~~~iPiIaa~M 340 (671)
-+.+|.++|+.-+.|. +.|+ ||..|+.. +++.-. ..+..+.==.
T Consensus 267 ----da~~a~~~Gad~iGfI-------------------f~~~-----SpR~V~~~~a~~i~~~------~~v~~VgVFv 312 (452)
T 1pii_A 267 ----DAKAAYDAGAIYGGLI-------------------FVAT-----SPRCVNVEQAQEVMAA------APLQYVGVFR 312 (452)
T ss_dssp ----HHHHHHHHTCSEEEEE-------------------CCTT-----CTTBCCHHHHHHHHHH------CCCEEEEEES
T ss_pred ----HHHHHHhcCCCEEEee-------------------cCCC-----CCCCCCHHHHHHHHhc------CCCCEEEEEe
Confidence 2233334454444421 1221 22333332 222100 0122222111
Q ss_pred CCCCCHHHHHHHHHcCCeEEE--ccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHc-CCcEEEEccccccccc
Q psy3862 341 DTVGTFEMAKHLAKHGLFTTI--HKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGA-GADFVMLGGMFAGHDQ 417 (671)
Q Consensus 341 DtV~~~~mA~~la~~Gglgvi--hr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~a-G~d~i~id~~a~gh~~ 417 (671)
| -+.+....+.+..++.++ |..+++|.....-...|.-++.+.+.....+ +.. ... .+|++.+| +..|-+-
T Consensus 313 n--~~~~~i~~~~~~~~ld~vQLHG~E~~~~~~~l~~~~p~~~~iika~~v~~~--~~~-~~~~~~d~~LlD-~~~GGtG 386 (452)
T 1pii_A 313 N--HDIADVVDKAKVLSLAAVQLHGNEEQLYIDTLREALPAHVAIWKALSVGET--LPA-REFQHVDKYVLD-NGQGGSG 386 (452)
T ss_dssp S--CCHHHHHHHHHHHTCSEEEECSCCCHHHHHHHHHHSCTTSEEEEEEECSSS--CCC-CCCTTCCEEEEE-SCSCCSS
T ss_pred C--CCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCCCcEEEEEecCCc--cch-hhhhcccEEEec-CCCCCCC
Confidence 1 145566666666566554 6677777665432223322344444333221 111 011 58999999 4434333
Q ss_pred cccccccccccccccccccccccC-c-eeeccccCchhHHHHHHcCCcEEEEC
Q psy3862 418 SGGELTNIEYMFFPLVGDMNSYLG-G-VVDGGCTSPGDVAKAMGAGADFVMLG 468 (671)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~i~gG~v~t~~~a~~l~aGAd~V~vG 468 (671)
...++- .++++.+ + ++.|| +.+.|+++++..+..+|=|-
T Consensus 387 ~~fdW~-----------~l~~~~~~p~iLAGG-L~p~NV~~ai~~~p~gvDvs 427 (452)
T 1pii_A 387 QRFDWS-----------LLNGQSLGNVLLAGG-LGADNCVEAAQTGCAGLDFN 427 (452)
T ss_dssp CCCCGG-----------GGTTSCCTTEEEESS-CCTTTHHHHHTTCCSEEEEC
T ss_pred CccCHH-----------HhhcccCCcEEEEcC-CCHHHHHHHHhcCCCEEEeC
Confidence 333431 1122211 2 44566 79999999887888877665
No 125
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=94.90 E-value=0.077 Score=54.30 Aligned_cols=132 Identities=15% Similarity=0.134 Sum_probs=71.7
Q ss_pred CcceEe----cCCCCCCCHHHHHHHHHcCCeEEEccCCCHHH---HHHHHhcCcccccceeeec-ccChhhHHHHHHcCC
Q psy3862 332 GVPIIA----ANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEE---WKAFAVQNPDVIKHVADGG-CTSPGDVAKAMGAGA 403 (671)
Q Consensus 332 ~iPiIa----a~MDtV~~~~mA~~la~~Gglgvihr~~~~e~---~~~~v~~~~~~~~~v~~~~-~~~~~~~~~l~~aG~ 403 (671)
++|++- .++...+..+++..+.+.|.=|++---.++|+ +.+.++++- ++.+.... .++++++..+.+.+.
T Consensus 94 ~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g--~~~i~l~~p~t~~~~i~~i~~~~~ 171 (268)
T 1qop_A 94 TIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHN--IAPIFICPPNADDDLLRQVASYGR 171 (268)
T ss_dssp SSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTT--CEEECEECTTCCHHHHHHHHHHCC
T ss_pred CCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcC--CcEEEEECCCCCHHHHHHHHhhCC
Confidence 467644 22444555789999999998877765666554 444444321 11111111 234567777777666
Q ss_pred cEEEEccccccccccccccccccccccccccccccccC-ceeeccccCchhHHH-HHHcCCcEEEECc
Q psy3862 404 DFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLG-GVVDGGCTSPGDVAK-AMGAGADFVMLGG 469 (671)
Q Consensus 404 d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~gG~v~t~~~a~-~l~aGAd~V~vG~ 469 (671)
+++.+. +..|.+-..-.. .......+..+|+... .+.+||-+.+.+.+. ++.+|||+|.||.
T Consensus 172 g~v~~~-s~~G~tG~~~~~---~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGS 235 (268)
T 1qop_A 172 GYTYLL-SRSGVTGAENRG---ALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGS 235 (268)
T ss_dssp SCEEEE-SSSSCCCSSSCC-----CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CcEEEE-ecCCcCCCccCC---CchHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 676665 434543221100 0011112333444432 244455567677666 5999999999995
No 126
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=94.89 E-value=0.55 Score=46.01 Aligned_cols=106 Identities=15% Similarity=0.195 Sum_probs=60.8
Q ss_pred hHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHh-CCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEE
Q psy3862 118 DLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREM-YPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCT 196 (671)
Q Consensus 118 d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~-~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~ 196 (671)
+++.+..++.. +++.+.++..........+.++.+++. .|...++. + +..+.+.++|+|.|-+....- ..
T Consensus 31 ~l~~~~~~~~~--G~~~v~lr~~~~~~~~~~~~~~~l~~~~~~~~~l~v-~----~~~~~a~~~gad~v~l~~~~~--~~ 101 (221)
T 1yad_A 31 ELARIIITIQN--EVDFIHIRERSKSAADILKLLDLIFEGGIDKRKLVM-N----GRVDIALFSTIHRVQLPSGSF--SP 101 (221)
T ss_dssp HHHHHHHHHGG--GCSEEEECCTTSCHHHHHHHHHHHHHTTCCGGGEEE-E----SCHHHHHTTTCCEEEECTTSC--CH
T ss_pred hHHHHHHHHHC--CCCEEEEccCCCCHHHHHHHHHHHHHhcCcCCeEEE-e----ChHHHHHHcCCCEEEeCCCcc--CH
Confidence 34455566665 778888875543345566777777653 23222332 2 456778899999997743211 00
Q ss_pred EEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEEEc
Q psy3862 197 TRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 197 t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+++..+ ...++-.+-|.+.++.+.++|||.|-+|
T Consensus 102 ~~~~~~~~---------~~~ig~sv~t~~~~~~a~~~gaD~i~~~ 137 (221)
T 1yad_A 102 KQIRARFP---------HLHIGRSVHSLEEAVQAEKEDADYVLFG 137 (221)
T ss_dssp HHHHHHCT---------TCEEEEEECSHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHCC---------CCEEEEEcCCHHHHHHHHhCCCCEEEEC
Confidence 11111111 1113445668888888889999988664
No 127
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=94.87 E-value=0.28 Score=50.63 Aligned_cols=27 Identities=15% Similarity=0.164 Sum_probs=22.4
Q ss_pred eEEEEEeccHHHHHHHHHCCCcEEEEC
Q psy3862 162 VIIAGNVVTGEMVEELILSGADVIKVG 188 (671)
Q Consensus 162 ~li~g~v~t~e~a~~Li~AGaD~IvVd 188 (671)
.+++-+..+.--|+.+.++|+|+|-+.
T Consensus 18 ~i~~~tayDa~sA~l~e~aG~d~ilvG 44 (275)
T 1o66_A 18 KIAMLTAYESSFAALMDDAGVEMLLVG 44 (275)
T ss_dssp CEEEEECCSHHHHHHHHHTTCCEEEEC
T ss_pred cEEEEeCcCHHHHHHHHHcCCCEEEEC
Confidence 355667788899999999999999874
No 128
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=94.81 E-value=0.016 Score=57.95 Aligned_cols=110 Identities=18% Similarity=0.180 Sum_probs=64.2
Q ss_pred HHHHHHHHhCCCceEEE--eeccC---CCChHHHHHHHHHHHhC-CCceEE---EEEec---cHHHHHHHHHCCCcEEEE
Q psy3862 120 AGLKEILAALPEIEYIC--LDVAN---GYTQTFVDFVRRIREMY-PKHVII---AGNVV---TGEMVEELILSGADVIKV 187 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Iv--ld~a~---G~~~~~~~~ik~lr~~~-P~~~li---~g~v~---t~e~a~~Li~AGaD~IvV 187 (671)
..++..++. +.+.+- ++... +....+.+.++.+++.. |...++ .+... ..+.++.+.++|+|+|..
T Consensus 74 ~~~~~A~~~--Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~t 151 (225)
T 1mzh_A 74 KEAVEAVRD--GAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKT 151 (225)
T ss_dssp HHHHHHHHT--TCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHc--CCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 344555665 555543 44332 23344555567666654 554455 22211 135578889999999976
Q ss_pred CcCC--CceEEEEecccCCcchhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEEccc
Q psy3862 188 GIGP--GSVCTTRLKNKTSDFFLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKVGIG 243 (671)
Q Consensus 188 dga~--G~~~~t~v~~~~~~~~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG~~ 243 (671)
..+. |.. +...+..++ .+| ++|||-|.+.+.+++++||| +||++
T Consensus 152 stg~~~gga----------~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~--~iG~s 204 (225)
T 1mzh_A 152 STGFAPRGT----------TLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGAD--RIGTS 204 (225)
T ss_dssp CCSCSSSCC----------CHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCS--EEEES
T ss_pred CCCCCCCCC----------CHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCch--HHHHc
Confidence 5421 111 111111111 245 79999999999999999999 56643
No 129
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=94.78 E-value=0.042 Score=56.58 Aligned_cols=122 Identities=14% Similarity=0.093 Sum_probs=71.5
Q ss_pred CCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcc-cccceeeecc-cChhhHHHHHHcCCcEEEEccccccccccccc
Q psy3862 344 GTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPD-VIKHVADGGC-TSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421 (671)
Q Consensus 344 ~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~-~~~~v~~~~~-~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~ 421 (671)
+..+++..+++.|.=|+|=--.++||..+++...++ -+..+....- ++++++.++.+.+-+|+..- +..|..-..-.
T Consensus 111 g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~v-S~~GvTG~~~~ 189 (267)
T 3vnd_A 111 GIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLL-SRAGVTGTESK 189 (267)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEES-CCCCCC-----
T ss_pred hHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEE-ecCCCCCCccC
Confidence 447799999999999977767777664444432211 1222322232 34577888888877788875 34433211100
Q ss_pred cccccccccccccccccccC-ceeeccccCchhHHH-HHHcCCcEEEECc
Q psy3862 422 LTNIEYMFFPLVGDMNSYLG-GVVDGGCTSPGDVAK-AMGAGADFVMLGG 469 (671)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~-~~i~gG~v~t~~~a~-~l~aGAd~V~vG~ 469 (671)
. .......+..+|++.. .+++|+-+.+.+.++ .+.+|||+|.||.
T Consensus 190 ~---~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 190 A---GEPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGS 236 (267)
T ss_dssp ------CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred C---cHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECH
Confidence 0 0111123444555543 255566677788877 8999999999984
No 130
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=94.75 E-value=0.066 Score=54.68 Aligned_cols=122 Identities=19% Similarity=0.144 Sum_probs=74.6
Q ss_pred CCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcc-cccceeeecc-cChhhHHHHHHcCCcEEEEccccccccccccc
Q psy3862 344 GTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPD-VIKHVADGGC-TSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421 (671)
Q Consensus 344 ~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~-~~~~v~~~~~-~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~ 421 (671)
+..+++..+++.|.=|+|=-..++||..++....++ -+..+.-..- ++++++.++.+.+-+|+... +..|..-....
T Consensus 104 G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~V-s~~GvTG~~~~ 182 (252)
T 3tha_A 104 GLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLL-ASIGITGTKSV 182 (252)
T ss_dssp CHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEE-CCSCSSSCSHH
T ss_pred hHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEE-ecCCCCCcccC
Confidence 456799999999999999988888885555433221 1333332333 34677888877777777665 32332211101
Q ss_pred cccccccccccccccccccC-ceeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 422 LTNIEYMFFPLVGDMNSYLG-GVVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~-~~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
. .......++.+|++.. .++.|+-+.+.+.++.+..+||+|.||.
T Consensus 183 ~---~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~~ADGVIVGS 228 (252)
T 3tha_A 183 E---EAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKVADGVIVGT 228 (252)
T ss_dssp H---HHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTTTSSEEEECH
T ss_pred C---CHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHhcCCEEEECH
Confidence 0 0111223445555543 2556666788998887777899999994
No 131
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=94.62 E-value=0.23 Score=51.78 Aligned_cols=82 Identities=12% Similarity=-0.004 Sum_probs=49.5
Q ss_pred HHHHHHHHHhCCCceEEEE-EeccHHHHHHHHHCCCcEEEECcCCCce---EEEEecccCCcchhhhhccccCCcccccc
Q psy3862 148 VDFVRRIREMYPKHVIIAG-NVVTGEMVEELILSGADVIKVGIGPGSV---CTTRLKNKTSDFFLIQFYSCIPQAGNVVT 223 (671)
Q Consensus 148 ~~~ik~lr~~~P~~~li~g-~v~t~e~a~~Li~AGaD~IvVdga~G~~---~~t~v~~~~~~~~~i~~i~~~p~aGnV~t 223 (671)
.+.++++++.. ..++++. .+...+.++.|.++|||+| |.+.+.. .+.++++... ..++--.+-|
T Consensus 67 ~~~i~~i~~~v-~iPvl~k~~i~~ide~qil~aaGAD~I--d~s~~~~~~~li~~i~~~~~---------g~~vvv~v~~ 134 (297)
T 4adt_A 67 PLKIEEIRKCI-SINVLAKVRIGHFVEAQILEELKVDML--DESEVLTMADEYNHINKHKF---------KTPFVCGCTN 134 (297)
T ss_dssp HHHHHHHHTTC-CSEEEEEEETTCHHHHHHHHHTTCSEE--EEETTSCCSCSSCCCCGGGC---------SSCEEEEESS
T ss_pred HHHHHHHHHhc-CCCEEEeccCCcHHHHHHHHHcCCCEE--EcCCCCCHHHHHHHHHhcCC---------CCeEEEEeCC
Confidence 45555555443 2345544 4455789999999999999 4444311 0111111111 1233335889
Q ss_pred HHHHHHHHHcCCCEEEEc
Q psy3862 224 GEMVEELILSGADVIKVG 241 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG 241 (671)
.+.++.++++|||.|.+.
T Consensus 135 ~~Ea~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 135 LGEALRRISEGASMIRTK 152 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhCCCCEEEEC
Confidence 999999999999988665
No 132
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=94.59 E-value=0.11 Score=53.74 Aligned_cols=63 Identities=17% Similarity=0.084 Sum_probs=40.5
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.|+...++||++|-+-.-++.- ..++.-+..+. .+| .-+.+.|..++..+.++|||+|-++
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f--------~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi 149 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSF--------QGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILII 149 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTT--------CCCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHCCCCEEEEecccccc--------CCCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEc
Confidence 478889999999999663211100 01111112221 345 2456788889999999999999998
No 133
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=94.57 E-value=0.24 Score=51.06 Aligned_cols=76 Identities=18% Similarity=0.149 Sum_probs=44.6
Q ss_pred eEEEEEeccHHHHHHHHHCCCcEEEECc-----CCCce---EEE---------EecccCCcchhhhhccccCCccccccH
Q psy3862 162 VIIAGNVVTGEMVEELILSGADVIKVGI-----GPGSV---CTT---------RLKNKTSDFFLIQFYSCIPQAGNVVTG 224 (671)
Q Consensus 162 ~li~g~v~t~e~a~~Li~AGaD~IvVdg-----a~G~~---~~t---------~v~~~~~~~~~i~~i~~~p~aGnV~t~ 224 (671)
.++.-+..+.--|+.+.++|+|+|-+.. ..|+. .++ .+.+-.++.+ .+.++|- |+-.+.
T Consensus 30 ~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~---vvaD~pf-gsY~s~ 105 (275)
T 3vav_A 30 KIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRAL---IVADLPF-GTYGTP 105 (275)
T ss_dssp CEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSE---EEEECCT-TSCSSH
T ss_pred cEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCC---EEEecCC-CCCCCH
Confidence 3556677888999999999999997753 33432 011 1111111111 1223453 322444
Q ss_pred HH----HHHHHHcCCCEEEEc
Q psy3862 225 EM----VEELILSGADVIKVG 241 (671)
Q Consensus 225 ~~----a~~li~aGAdgvkVG 241 (671)
++ +..++++||++||+=
T Consensus 106 ~~a~~~a~rl~kaGa~aVklE 126 (275)
T 3vav_A 106 ADAFASAVKLMRAGAQMVKFE 126 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEC
Confidence 44 567889999999975
No 134
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=94.45 E-value=0.08 Score=52.12 Aligned_cols=100 Identities=24% Similarity=0.270 Sum_probs=61.2
Q ss_pred CceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhh
Q psy3862 131 EIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQ 210 (671)
Q Consensus 131 ~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~ 210 (671)
+++.+++..... .. +.+++.+| ..+++..+.+.+.++.+.++|+|+|.++.--++..-... ....+..+.
T Consensus 88 gad~v~l~~~~~----~~---~~~~~~~~-~~~ig~sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~--~~~~~~~l~ 157 (221)
T 1yad_A 88 TIHRVQLPSGSF----SP---KQIRARFP-HLHIGRSVHSLEEAVQAEKEDADYVLFGHVFETDCKKGL--EGRGVSLLS 157 (221)
T ss_dssp TCCEEEECTTSC----CH---HHHHHHCT-TCEEEEEECSHHHHHHHHHTTCSEEEEECCC------------CHHHHHH
T ss_pred CCCEEEeCCCcc----CH---HHHHHHCC-CCEEEEEcCCHHHHHHHHhCCCCEEEECCccccCCCCCC--CCCCHHHHH
Confidence 778887753211 12 33333455 445566778899999999999999988542111100000 001122222
Q ss_pred hcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 211 FYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 211 ~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+. .+| ++||| |.+.+..++++|||+|-||
T Consensus 158 ~~~~~~~~pvia~GGI-~~~nv~~~~~~Ga~gv~vg 192 (221)
T 1yad_A 158 DIKQRISIPVIAIGGM-TPDRLRDVKQAGADGIAVM 192 (221)
T ss_dssp HHHHHCCSCEEEESSC-CGGGHHHHHHTTCSEEEES
T ss_pred HHHHhCCCCEEEECCC-CHHHHHHHHHcCCCEEEEh
Confidence 221 356 79999 9999999999999999888
No 135
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=94.44 E-value=0.099 Score=52.12 Aligned_cols=121 Identities=20% Similarity=0.212 Sum_probs=69.6
Q ss_pred ceEEecCCChhhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEec--------------c-H
Q psy3862 107 HVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVV--------------T-G 171 (671)
Q Consensus 107 ~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~--------------t-~ 171 (671)
|+.+.-++. +.+++..++.+ +++.+++.... ..-.+.+.++.+.++....++-... + .
T Consensus 77 pv~v~ggI~--~~~~~~~~l~~--Gad~V~lg~~~---l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~ 149 (244)
T 1vzw_A 77 KVELSGGIR--DDDTLAAALAT--GCTRVNLGTAA---LETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLY 149 (244)
T ss_dssp EEEEESSCC--SHHHHHHHHHT--TCSEEEECHHH---HHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHH
T ss_pred cEEEECCcC--CHHHHHHHHHc--CCCEEEECchH---hhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHH
Confidence 455444443 44567777777 78888875321 1111233333333332222322322 3 4
Q ss_pred HHHHHHHHCCCcEEEECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHc---CCCEEEEc
Q psy3862 172 EMVEELILSGADVIKVGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILS---GADVIKVG 241 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~a---GAdgvkVG 241 (671)
+.++.+.++|+|.|.+-+ ..|+. ..+++..++-+. .+| +.|||.+.+.+..++++ ||||+-||
T Consensus 150 e~~~~~~~~G~~~i~~~~~~~~~~~-------~g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 150 ETLDRLNKEGCARYVVTDIAKDGTL-------QGPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp HHHHHHHHTTCCCEEEEEC--------------CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred HHHHHHHhCCCCEEEEeccCccccc-------CCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCCCceeeee
Confidence 667899999999876533 11110 012333333332 356 78999999999999999 99999999
No 136
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=94.23 E-value=0.3 Score=51.96 Aligned_cols=70 Identities=19% Similarity=0.134 Sum_probs=36.2
Q ss_pred HHHHcCCcEEEEccccc--cccccccccccccccccccccccccccC--ceeeccccCchhHHH-HHHcCCcEEEECc
Q psy3862 397 KAMGAGADFVMLGGMFA--GHDQSGGELTNIEYMFFPLVGDMNSYLG--GVVDGGCTSPGDVAK-AMGAGADFVMLGG 469 (671)
Q Consensus 397 ~l~~aG~d~i~id~~a~--gh~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~gG~v~t~~~a~-~l~aGAd~V~vG~ 469 (671)
.+.++|+|+|.+.+... |++...... .....++.+..+++..+ .++..|-+.+.+-++ ++. |||+|++|.
T Consensus 152 ~l~~aG~d~I~V~~r~~~~g~~g~~~~~--~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iGR 226 (350)
T 3b0p_A 152 AMAEAGVKVFVVHARSALLALSTKANRE--IPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLGR 226 (350)
T ss_dssp HHHHTTCCEEEEECSCBC------------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEECH
T ss_pred HHHHcCCCEEEEecCchhcccCcccccC--CCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEECH
Confidence 34678999999875332 343210000 00011223333444432 255556577777766 455 999999995
No 137
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=94.18 E-value=0.092 Score=54.18 Aligned_cols=109 Identities=12% Similarity=-0.020 Sum_probs=66.3
Q ss_pred HHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEec
Q psy3862 121 GLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLK 200 (671)
Q Consensus 121 rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~ 200 (671)
.+.+.... ++|.|.+..+--....+.++++..++ + +..+..-+.+.+.+++++++|+|+|-+..... +
T Consensus 134 qi~ea~~~--GAD~VlLi~a~L~~~~l~~l~~~a~~-l--Gl~~lvevh~~eEl~~A~~~ga~iIGinnr~l-------~ 201 (272)
T 3tsm_A 134 QVYEARSW--GADCILIIMASVDDDLAKELEDTAFA-L--GMDALIEVHDEAEMERALKLSSRLLGVNNRNL-------R 201 (272)
T ss_dssp HHHHHHHT--TCSEEEEETTTSCHHHHHHHHHHHHH-T--TCEEEEEECSHHHHHHHTTSCCSEEEEECBCT-------T
T ss_pred HHHHHHHc--CCCEEEEcccccCHHHHHHHHHHHHH-c--CCeEEEEeCCHHHHHHHHhcCCCEEEECCCCC-------c
Confidence 44445555 88998887552212233344443333 2 22222346788999999999999994422211 1
Q ss_pred ccCCc----chhhhhcc-ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 201 NKTSD----FFLIQFYS-CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 201 ~~~~~----~~~i~~i~-~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
...++ ..+++.+. .+| +.|||-|.+.++.+.++|||||-||
T Consensus 202 t~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG 249 (272)
T 3tsm_A 202 SFEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIG 249 (272)
T ss_dssp TCCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEEC
T ss_pred cCCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 11112 12222221 233 6999999999999999999999999
No 138
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=94.08 E-value=0.011 Score=73.15 Aligned_cols=294 Identities=13% Similarity=0.101 Sum_probs=159.5
Q ss_pred eccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCC-CCCH----HHHHHHHHcCCeEEEcc-
Q psy3862 290 INDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDT-VGTF----EMAKHLAKHGLFTTIHK- 363 (671)
Q Consensus 290 ~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDt-V~~~----~mA~~la~~Gglgvihr- 363 (671)
++..-.+|+|++..+.-..-.+.+|||+..++ ..||+-++|-. ..+. .+|+++++.|+++.+=-
T Consensus 818 ~~~~~~~~~dl~~~~~~l~~i~~~ev~~~~~I----------~~Pf~isaMS~GalS~ea~~aLA~Aa~~aGg~~~tGeG 887 (1479)
T 1ea0_A 818 NKRPPMQLRDLLELRSTKAPVPVDEVESITAI----------RKRFITPGMSMGALSPEAHGTLNVAMNRIGAKSDSGEG 887 (1479)
T ss_dssp HTSCCCSGGGGEEECCSSCCCCGGGSCCHHHH----------HTTEEEEECCBTTBCHHHHHHHHHHHHHTTCEEECCTT
T ss_pred ccCCCCchhhhhhccCCCCCCCcccccccccc----------cCCeEecCccccccCHHHHHHHHHHHHHcCCeeEcCCC
Confidence 44556789999998753333445778877655 48999999984 3344 89999999999988853
Q ss_pred CCCHHHHH---------HHHhcC-cc-------ccc-----ceeee-------ccc-C----hhhHHHH--HHcCCcEEE
Q psy3862 364 YYTLEEWK---------AFAVQN-PD-------VIK-----HVADG-------GCT-S----PGDVAKA--MGAGADFVM 407 (671)
Q Consensus 364 ~~~~e~~~---------~~v~~~-~~-------~~~-----~v~~~-------~~~-~----~~~~~~l--~~aG~d~i~ 407 (671)
.+++|+.. ..+++. +. ++. ++..+ |+. . .++++++ +..|++++.
T Consensus 888 g~~pe~~~~~~~g~~~~~~IrQ~asg~FGVn~~~l~~a~~ieIKigQGAKpG~GG~Lp~~kv~~~IA~~R~~~~Gv~lis 967 (1479)
T 1ea0_A 888 GEDPARFRPDKNGDNWNSAIKQVASGRFGVTAEYLNQCRELEIKVAQGAKPGEGGQLPGFKVTEMIARLRHSTPGVMLIS 967 (1479)
T ss_dssp CCCGGGSSBCTTSCBCCCSEEEECSSCTTCCHHHHTSCSEEEEECCCTTSTTTCCEECGGGCCHHHHHHHTCCTTCCEEC
T ss_pred ccCHHHhhhccccchhhhhhhhhcCCCCCcChHHccccchHHHHHhccCCCCcCCCCCHHHHHHHHHHHcCCCCCCCccC
Confidence 34555431 122221 10 000 11111 111 1 1334444 345788775
Q ss_pred Eccccccc-cccccccccccccccccccccccccCc--e---eeccccCchhHHH-HHHcCCcEEEECccccCCccCCCc
Q psy3862 408 LGGMFAGH-DQSGGELTNIEYMFFPLVGDMNSYLGG--V---VDGGCTSPGDVAK-AMGAGADFVMLGGMFAGHDQSGGE 480 (671)
Q Consensus 408 id~~a~gh-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---i~gG~v~t~~~a~-~l~aGAd~V~vG~~g~G~s~ctt~ 480 (671)
- .+| ..+..+ .....+.++|+..+. + ++++ ....+.|+ +.++|||+|.|...++|+...+-.
T Consensus 968 P----~~~~d~~s~e------dl~~~I~~Lk~~~~~~PV~VKlv~~-~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~ 1036 (1479)
T 1ea0_A 968 P----PPHHDIYSIE------DLAQLIYDLKQINPDAKVTVKLVSR-SGIGTIAAGVAKANADIILISGNSGGTGASPQT 1036 (1479)
T ss_dssp C----SSCTTCSSHH------HHHHHHHHHHHHCTTCEEEEEEECC-TTHHHHHHHHHHTTCSEEEEECTTCCCSSEETT
T ss_pred C----CCCcCcCCHH------HHHHHHHHHHHhCCCCCEEEEEcCC-CChHHHHHHHHHcCCcEEEEcCCCCCCCCCchh
Confidence 3 233 222111 001123333443321 1 1121 22355565 569999999994335553221111
Q ss_pred EEEeCCeEEEEeeCcccHHHHHhhccccccc-------cccCCceEeeecCCCHHHHHH-----HHHhhHhHhccccCcc
Q psy3862 481 LIEKDGKKVKLFYGMSSTTAMDKHAGGVAEY-------RAAEGKTVQVPYRGDVNDTVQ-----DILGGLRSACTYVGAS 548 (671)
Q Consensus 481 ~v~~~g~~~k~g~G~~q~tAi~~~a~~~~~y-------~~~~G~~v~i~~~Gdi~kAia-----vMlG~~~ag~~e~~g~ 548 (671)
. ....|.|...++.++.....++ ..++|+ |++..|++||++ |++|..+--+.+|.
T Consensus 1037 ~--------~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGG---IrtG~DVakALaLGAdaV~iGTafL~a~gc~-- 1103 (1479)
T 1ea0_A 1037 S--------IKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGG---LKTGRDIVIAAMLGAEEFGIGTASLIAMGCI-- 1103 (1479)
T ss_dssp H--------HHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESS---CCSHHHHHHHHHTTCSEEECCHHHHHHHTCC--
T ss_pred h--------hcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECC---CCCHHHHHHHHHcCCCeeeEcHHHHHHHHHH--
Confidence 0 1246788887776654332211 123332 789999999999 77777763322111
Q ss_pred cccccCCcceEEEecccccccccchhhhcccccccceeeccccccccccccccchhccccccccCCCceEecccccCHHH
Q psy3862 549 KLKELPRRATFIRCTAQLNNVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVND 628 (671)
Q Consensus 549 ~i~e~~~~a~fv~~~~~~~~~~~~~~~~~~G~~~~k~y~Gm~s~~a~~~~~~~~r~~~~~~~~~~eG~~~~v~~kG~v~~ 628 (671)
....++. .+.-+|-...+.. ...+.+.| ...+.+
T Consensus 1104 ~~r~Ch~---------------------------~~CP~Gvatqdp~------------l~~~~~gg-------~e~V~n 1137 (1479)
T 1ea0_A 1104 MVRQCHS---------------------------NTCPVGVCVQDDK------------LRQKFVGT-------PEKVVN 1137 (1479)
T ss_dssp CCCCTTT---------------------------TCCTTSSSCCCTT------------GGGSCCCC-------HHHHHH
T ss_pred HHhhccC---------------------------CCCCceeEEeCHH------------HHhhcCCc-------hHHHHH
Confidence 0000000 0011222221000 00112222 335888
Q ss_pred HHHHHHHHHhhhccccCcccccccccccEEEEecc
Q psy3862 629 TVQDILGGLRSACTYVGASKLKELPRRATFIRCTA 663 (671)
Q Consensus 629 ~l~~l~gGLrs~m~y~Ga~~l~el~~~a~Fvrvt~ 663 (671)
++..+..+||..|..+|.++++||+.++.+++++.
T Consensus 1138 ~l~~l~~ELr~~Ma~lG~~si~eL~g~~~ll~~~~ 1172 (1479)
T 1ea0_A 1138 LFTFLAEEVREILAGLGFRSLNEVIGRTDLLHQVS 1172 (1479)
T ss_dssp HHHHHHHHHHHHHHHHTCSCSGGGTTCGGGEEEC-
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHhCchheeeccc
Confidence 89999999999999999999999999999998886
No 139
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=94.01 E-value=0.072 Score=53.33 Aligned_cols=176 Identities=19% Similarity=0.195 Sum_probs=90.8
Q ss_pred Cccccc-cHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccC
Q psy3862 217 QAGNVV-TGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKL 295 (671)
Q Consensus 217 ~aGnV~-t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l 295 (671)
.++... ..+.++.+.++|||-+.+++ .-|--+|.++--.+.++..+++
T Consensus 12 la~D~~~l~~~i~~~~~~Gad~ihldi----------~DG~fvp~~~~g~~~v~~lr~~--------------------- 60 (230)
T 1tqj_A 12 LSADFSRLGEEIKAVDEAGADWIHVDV----------MDGRFVPNITIGPLIVDAIRPL--------------------- 60 (230)
T ss_dssp GGSCGGGHHHHHHHHHHTTCSEEEEEE----------EBSSSSSCBCBCHHHHHHHGGG---------------------
T ss_pred eecCHhHHHHHHHHHHHcCCCEEEEEE----------EecCCCcchhhhHHHHHHHHhh---------------------
Confidence 355655 45677778889999999997 2344445555444555444321
Q ss_pred CCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEE-EccC----CCHHHH
Q psy3862 296 DFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTT-IHKY----YTLEEW 370 (671)
Q Consensus 296 ~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgv-ihr~----~~~e~~ 370 (671)
+ +..++++++-.| . .+....+.+.|.=++ +|-- ..+.+.
T Consensus 61 ------------------------------~-~~~~~vhlmv~d--p---~~~i~~~~~aGadgv~vh~e~~~~~~~~~~ 104 (230)
T 1tqj_A 61 ------------------------------T-KKTLDVHLMIVE--P---EKYVEDFAKAGADIISVHVEHNASPHLHRT 104 (230)
T ss_dssp ------------------------------C-CSEEEEEEESSS--G---GGTHHHHHHHTCSEEEEECSTTTCTTHHHH
T ss_pred ------------------------------c-CCcEEEEEEccC--H---HHHHHHHHHcCCCEEEECcccccchhHHHH
Confidence 0 123456666633 2 223445555665544 3433 245566
Q ss_pred HHHHhcCcccccceeeecc-cCh-hhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccC------c
Q psy3862 371 KAFAVQNPDVIKHVADGGC-TSP-GDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLG------G 442 (671)
Q Consensus 371 ~~~v~~~~~~~~~v~~~~~-~~~-~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 442 (671)
++.+++.. ..+..+.. .++ +.+.. +..++|++.+-.+..|...+.. .......+..+|+..+ .
T Consensus 105 ~~~i~~~g---~~~gv~~~p~t~~e~~~~-~~~~~D~v~~msv~pg~ggq~~-----~~~~~~~i~~lr~~~~~~~~~~~ 175 (230)
T 1tqj_A 105 LCQIRELG---KKAGAVLNPSTPLDFLEY-VLPVCDLILIMSVNPGFGGQSF-----IPEVLPKIRALRQMCDERGLDPW 175 (230)
T ss_dssp HHHHHHTT---CEEEEEECTTCCGGGGTT-TGGGCSEEEEESSCC----CCC-----CGGGHHHHHHHHHHHHHHTCCCE
T ss_pred HHHHHHcC---CcEEEEEeCCCcHHHHHH-HHhcCCEEEEEEeccccCCccC-----cHHHHHHHHHHHHHHHhcCCCCc
Confidence 66665421 11222221 233 33333 3458998877644344332110 1111112233344331 2
Q ss_pred -eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 443 -VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 443 -~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
.++|| +...++.+..++|||++.||.
T Consensus 176 I~v~GG-I~~~~~~~~~~aGad~vvvGS 202 (230)
T 1tqj_A 176 IEVDGG-LKPNNTWQVLEAGANAIVAGS 202 (230)
T ss_dssp EEEESS-CCTTTTHHHHHHTCCEEEESH
T ss_pred EEEECC-cCHHHHHHHHHcCCCEEEECH
Confidence 56777 466677778899999999995
No 140
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=93.81 E-value=0.17 Score=50.18 Aligned_cols=121 Identities=19% Similarity=0.190 Sum_probs=70.3
Q ss_pred ceEEecCCChhhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEE---------e---------
Q psy3862 107 HVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGN---------V--------- 168 (671)
Q Consensus 107 ~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~---------v--------- 168 (671)
|+.+.-++. +.+++..++.+ +++.+++....- .-.+.++++.+.++....++-. +
T Consensus 76 pv~v~ggi~--~~~~~~~~l~~--Gad~V~lg~~~l---~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~ 148 (244)
T 2y88_A 76 QVELSGGIR--DDESLAAALAT--GCARVNVGTAAL---ENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDG 148 (244)
T ss_dssp EEEEESSCC--SHHHHHHHHHT--TCSEEEECHHHH---HCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEE
T ss_pred cEEEECCCC--CHHHHHHHHHc--CCCEEEECchHh---hChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCC
Confidence 455544443 45567777777 788888764311 1112333333333322222112 1
Q ss_pred -ccHHHHHHHHHCCCcEEEECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHc---CCCE
Q psy3862 169 -VTGEMVEELILSGADVIKVGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILS---GADV 237 (671)
Q Consensus 169 -~t~e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~a---GAdg 237 (671)
...+.++.+.++|+|.|.+-+ ..|+. ..+++..+..+. .+| +.|||.+.+.+..++++ ||||
T Consensus 149 ~~~~e~~~~~~~~G~~~i~~~~~~~~~~~-------~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~ 221 (244)
T 2y88_A 149 GDLWDVLERLDSEGCSRFVVTDITKDGTL-------GGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEG 221 (244)
T ss_dssp EEHHHHHHHHHHTTCCCEEEEETTTTTTT-------SCCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHTTGGGTEEE
T ss_pred CCHHHHHHHHHhCCCCEEEEEecCCcccc-------CCCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHhhccCCCCE
Confidence 125778899999999886633 11110 012333333332 356 68999999999999999 9999
Q ss_pred EEEc
Q psy3862 238 IKVG 241 (671)
Q Consensus 238 vkVG 241 (671)
+-||
T Consensus 222 v~vG 225 (244)
T 2y88_A 222 AIVG 225 (244)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9999
No 141
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=93.65 E-value=0.43 Score=48.48 Aligned_cols=62 Identities=21% Similarity=0.135 Sum_probs=42.0
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccC-Ccchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKT-SDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~-~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.|+...++||++|-+-.-.+. + .+...+..+. .+| .-+.|.+..++..+.++|||+|-+|
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~~---------f~G~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~ 135 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPHR---------FGGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLI 135 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSS---------SCCCHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEecchhh---------hccCHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEEC
Confidence 57889999999999966221110 1 1222222221 356 4677889989999999999999998
No 142
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=93.64 E-value=0.081 Score=51.68 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=62.5
Q ss_pred HHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCC--CceEE
Q psy3862 119 LAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP--GSVCT 196 (671)
Q Consensus 119 ~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~--G~~~~ 196 (671)
.++++..+.. +++.+++.. ....+.+..+ .+. ..++.+ +.|.+.++.+.+.|+|+|.+--.+ |-..+
T Consensus 70 ~~~i~~a~~~--Gad~V~~~~---~~~~~~~~~~----~~g-~~~~~g-~~t~~e~~~a~~~G~d~v~v~~t~~~g~~~~ 138 (212)
T 2v82_A 70 PEQVDALARM--GCQLIVTPN---IHSEVIRRAV----GYG-MTVCPG-CATATEAFTALEAGAQALKIFPSSAFGPQYI 138 (212)
T ss_dssp HHHHHHHHHT--TCCEEECSS---CCHHHHHHHH----HTT-CEEECE-ECSHHHHHHHHHTTCSEEEETTHHHHCHHHH
T ss_pred HHHHHHHHHc--CCCEEEeCC---CCHHHHHHHH----HcC-CCEEee-cCCHHHHHHHHHCCCCEEEEecCCCCCHHHH
Confidence 4567777777 788887432 2233333332 232 233444 678888888899999999862211 10001
Q ss_pred EEecccCCcchhhhhccccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 197 TRLKNKTSDFFLIQFYSCIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 197 t~v~~~~~~~~~i~~i~~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.++++..+ ..+| +.|||. .+.+..++++||||+-||
T Consensus 139 ~~l~~~~~--------~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vG 176 (212)
T 2v82_A 139 KALKAVLP--------SDIAVFAVGGVT-PENLAQWIDAGCAGAGLG 176 (212)
T ss_dssp HHHHTTSC--------TTCEEEEESSCC-TTTHHHHHHHTCSEEEEC
T ss_pred HHHHHhcc--------CCCeEEEeCCCC-HHHHHHHHHcCCCEEEEC
Confidence 11111111 0245 689996 899999999999999988
No 143
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.59 E-value=0.15 Score=53.04 Aligned_cols=100 Identities=17% Similarity=0.162 Sum_probs=53.6
Q ss_pred HHHHHHHHCCCcEEEECcC--CCceEEEEecccCCcc-hhhhhcc---ccCCccccccHHHHHHHHHcCCCEEEEcccCC
Q psy3862 172 EMVEELILSGADVIKVGIG--PGSVCTTRLKNKTSDF-FLIQFYS---CIPQAGNVVTGEMVEELILSGADVIKVGIGPG 245 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga--~G~~~~t~v~~~~~~~-~~i~~i~---~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~ 245 (671)
+-+++|.++|+|.|.+.+. +... ..+ .+. .++..+. ..|++.-+.+.+.++.++++|++.|++-.+..
T Consensus 34 ~i~~~L~~~Gv~~IE~g~~~~~~~~--~~~----~d~~~~~~~~~~~~~~~~~~l~~~~~~i~~a~~aG~~~v~i~~~~s 107 (302)
T 2ftp_A 34 RLVDDLSAAGLDYIEVGSFVSPKWV--PQM----AGSAEVFAGIRQRPGVTYAALAPNLKGFEAALESGVKEVAVFAAAS 107 (302)
T ss_dssp HHHHHHHHTTCSEEEEEECSCTTTC--GGG----TTHHHHHHHSCCCTTSEEEEECCSHHHHHHHHHTTCCEEEEEEESC
T ss_pred HHHHHHHHcCcCEEEECCCcCcccc--ccc----cCHHHHHHHhhhcCCCEEEEEeCCHHHHHHHHhCCcCEEEEEEecC
Confidence 5577888999999987541 1000 000 000 0111111 12333334578999999999999998865443
Q ss_pred CccccceecccCcc-hhhhHHHHHHHhhhcCCcc
Q psy3862 246 SVCTTRLKTGVGYP-QFSAVLECADAAHGLGGHI 278 (671)
Q Consensus 246 ~~~~Tr~V~gv~~~-~~~~~~~~~~~~~~~~~~~ 278 (671)
.....+ ..+..+- .+..+.++.+.||++|.++
T Consensus 108 ~~~~~~-~~~~s~ee~l~~~~~~v~~a~~~G~~V 140 (302)
T 2ftp_A 108 EAFSQR-NINCSIKDSLERFVPVLEAARQHQVRV 140 (302)
T ss_dssp HHHHHH-HHSSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHH-HhCCCHHHHHHHHHHHHHHHHHCCCeE
Confidence 321111 1122222 2455677788888776543
No 144
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=93.50 E-value=0.093 Score=52.35 Aligned_cols=120 Identities=14% Similarity=0.158 Sum_probs=71.8
Q ss_pred ceEEecCCChhhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEe----------------cc
Q psy3862 107 HVAVSSGISAKDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNV----------------VT 170 (671)
Q Consensus 107 ~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v----------------~t 170 (671)
|+.+.-|+ .+.+.+.+++.. +++.+++..+. ..-.+.++++ +.++....++-.+ .+
T Consensus 75 pvi~~Ggi--~~~~~~~~~~~~--Gad~V~lg~~~---l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~ 146 (241)
T 1qo2_A 75 HIQIGGGI--RSLDYAEKLRKL--GYRRQIVSSKV---LEDPSFLKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDP 146 (241)
T ss_dssp GEEEESSC--CSHHHHHHHHHT--TCCEEEECHHH---HHCTTHHHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCH
T ss_pred cEEEECCC--CCHHHHHHHHHC--CCCEEEECchH---hhChHHHHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCH
Confidence 45444344 345566666666 77888775331 0111234555 4565322332233 23
Q ss_pred HHHHHHHHHCCCcEEEECcC--CCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHc-----C-CCE
Q psy3862 171 GEMVEELILSGADVIKVGIG--PGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILS-----G-ADV 237 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga--~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~a-----G-Adg 237 (671)
.+.++.+.++|++.|.+-.- .|+ ..-+++.++..+. .+| +.|||.+.+.++.++++ | |||
T Consensus 147 ~e~~~~~~~~G~~~i~~t~~~~~g~-------~~g~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adg 219 (241)
T 1qo2_A 147 VSLLKRLKEYGLEEIVHTEIEKDGT-------LQEHDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKG 219 (241)
T ss_dssp HHHHHHHHTTTCCEEEEEETTHHHH-------TCCCCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHhCCCCEEEEEeeccccc-------CCcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccCCeEeE
Confidence 46788899999998866220 010 0113444444442 356 68999999999999998 9 999
Q ss_pred EEEc
Q psy3862 238 IKVG 241 (671)
Q Consensus 238 vkVG 241 (671)
+-||
T Consensus 220 v~vg 223 (241)
T 1qo2_A 220 VIVG 223 (241)
T ss_dssp EEEC
T ss_pred EEee
Confidence 9999
No 145
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=93.46 E-value=0.22 Score=51.29 Aligned_cols=84 Identities=13% Similarity=0.033 Sum_probs=45.2
Q ss_pred HHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccccCCccccccHHHHH
Q psy3862 149 DFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVE 228 (671)
Q Consensus 149 ~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~ 228 (671)
+.++++++.+....++.....+.+.++.+.++|||.| |+..... ...+.+.....+ ..+++.-.+.|.+.+.
T Consensus 68 ~~i~~i~~~~~~Pvi~~~~~~~~~~~~~~~~aGad~v--~~~~~~~-~~~~~~~~~~~~-----~~i~l~~~v~~~~~~~ 139 (297)
T 2zbt_A 68 KIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIGVDFI--DESEVLT-PADEEHHIDKWK-----FKVPFVCGARNLGEAL 139 (297)
T ss_dssp HHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCSEE--EEETTSC-CSCSSCCCCGGG-----CSSCEEEEESSHHHHH
T ss_pred HHHHHHHHhcCCCeEEEeccCCHHHHHHHHHCCCCEE--eeeCCCC-hHHHHHHHHHhC-----CCceEEeecCCHHHHH
Confidence 3455554443211223334556899999999999999 3211100 011100000000 0233444567888899
Q ss_pred HHHHcCCCEEEE
Q psy3862 229 ELILSGADVIKV 240 (671)
Q Consensus 229 ~li~aGAdgvkV 240 (671)
.+.++|||.|.+
T Consensus 140 ~a~~~Gad~I~v 151 (297)
T 2zbt_A 140 RRIAEGAAMIRT 151 (297)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHcCCCEEEE
Confidence 999999998633
No 146
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=93.43 E-value=0.19 Score=51.21 Aligned_cols=127 Identities=17% Similarity=0.163 Sum_probs=73.5
Q ss_pred CcceEe----cCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCccc-ccceeeecc-cChhhHHHHHHcCCcE
Q psy3862 332 GVPIIA----ANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDV-IKHVADGGC-TSPGDVAKAMGAGADF 405 (671)
Q Consensus 332 ~iPiIa----a~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~-~~~v~~~~~-~~~~~~~~l~~aG~d~ 405 (671)
++|++- .+++.-+..+++....+.|.=|++---.++|+..+++...++. +..+.-..- ++++++..+.+.+..+
T Consensus 94 ~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gf 173 (262)
T 2ekc_A 94 DIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEM 173 (262)
T ss_dssp TSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSC
T ss_pred CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCC
Confidence 577776 2233334467888899999988888777888766665433221 121221122 3457777776666666
Q ss_pred EEEccccccc---cc-----cccccccccccccccccccccccC-ceeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 406 VMLGGMFAGH---DQ-----SGGELTNIEYMFFPLVGDMNSYLG-GVVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 406 i~id~~a~gh---~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
+... +..|. .. ...++ +..+|+... .+..|+-+.+.+.++.+.+|||+|.||.
T Consensus 174 iy~v-s~~g~TG~~~~~~~~~~~~~----------v~~vr~~~~~pv~vG~GI~t~e~~~~~~~gADgvIVGS 235 (262)
T 2ekc_A 174 TYFV-SVTGTTGAREKLPYERIKKK----------VEEYRELCDKPVVVGFGVSKKEHAREIGSFADGVVVGS 235 (262)
T ss_dssp EEEE-SSCC---------CHHHHHH----------HHHHHHHCCSCEEEESSCCSHHHHHHHHTTSSEEEECH
T ss_pred EEEE-ecCCccCCCCCcCcccHHHH----------HHHHHhhcCCCEEEeCCCCCHHHHHHHHcCCCEEEECH
Confidence 6554 22222 11 11123 333444432 2444555687888777999999999995
No 147
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=93.41 E-value=3 Score=43.02 Aligned_cols=27 Identities=15% Similarity=-0.007 Sum_probs=22.3
Q ss_pred eEEEEEeccHHHHHHHHHCCCcEEEEC
Q psy3862 162 VIIAGNVVTGEMVEELILSGADVIKVG 188 (671)
Q Consensus 162 ~li~g~v~t~e~a~~Li~AGaD~IvVd 188 (671)
.++.-+..+.--|+.+.++|+|+|-+.
T Consensus 35 ~i~~~tayDa~sA~l~e~aG~d~ilvG 61 (281)
T 1oy0_A 35 KWAMLTAYDYSTARIFDEAGIPVLLVG 61 (281)
T ss_dssp CEEEEECCSHHHHHHHHTTTCCEEEEC
T ss_pred cEEEEeCcCHHHHHHHHHcCCCEEEEC
Confidence 355667788899999999999999875
No 148
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=93.33 E-value=0.37 Score=54.46 Aligned_cols=64 Identities=27% Similarity=0.208 Sum_probs=48.7
Q ss_pred HHHHHHHHHCCCcEEEECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHH-cCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELIL-SGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~-aGAdgvkVG 241 (671)
.+.++.+.++|+|.|.+-+ ..|+. .-+++.++..+. .+| +.|||.+.+.++.+++ +||||+-+|
T Consensus 455 ~e~a~~~~~~Ga~~il~t~~~~dG~~-------~G~d~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg 526 (555)
T 1jvn_A 455 WELTRACEALGAGEILLNCIDKDGSN-------SGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGA 526 (555)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTTTC-------SCCCHHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCC-------CCCCHHHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHH
Confidence 5889999999999998744 22321 124555555553 367 7899999999999998 899999999
No 149
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=93.11 E-value=0.11 Score=54.30 Aligned_cols=83 Identities=22% Similarity=0.291 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc-ccC--Ccccccc
Q psy3862 147 FVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS-CIP--QAGNVVT 223 (671)
Q Consensus 147 ~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~-~~p--~aGnV~t 223 (671)
+.+.++..++.+|.. ++.-.+.+.+.++.++++|+|+|.+|...-. .+++ .+..+. .+| +.||| |
T Consensus 195 i~~ai~~~r~~~~~~-kI~vev~tlee~~eA~~aGaD~I~ld~~~~e----~l~~------~v~~~~~~~~I~ASGGI-t 262 (296)
T 1qap_A 195 VRQAVEKAFWLHPDV-PVEVEVENLDELDDALKAGADIIMLDNFNTD----QMRE------AVKRVNGQARLEVSGNV-T 262 (296)
T ss_dssp HHHHHHHHHHHSTTS-CEEEEESSHHHHHHHHHTTCSEEEESSCCHH----HHHH------HHHTTCTTCCEEECCCS-C
T ss_pred HHHHHHHHHHhCCCC-cEEEEeCCHHHHHHHHHcCCCEEEECCCCHH----HHHH------HHHHhCCCCeEEEECCC-C
Confidence 345667667777764 4444667788899999999999999852210 0110 011111 233 79999 9
Q ss_pred HHHHHHHHHcCCCEEEEc
Q psy3862 224 GEMVEELILSGADVIKVG 241 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG 241 (671)
.+.+.++.++|||++-||
T Consensus 263 ~~~i~~~a~~GvD~isvG 280 (296)
T 1qap_A 263 AETLREFAETGVDFISVG 280 (296)
T ss_dssp HHHHHHHHHTTCSEEECS
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 999999999999988665
No 150
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=93.09 E-value=0.027 Score=58.10 Aligned_cols=84 Identities=20% Similarity=0.201 Sum_probs=56.2
Q ss_pred HHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceE---EEEecccCCcchhhhhccccC--Cccccc
Q psy3862 148 VDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVC---TTRLKNKTSDFFLIQFYSCIP--QAGNVV 222 (671)
Q Consensus 148 ~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~---~t~v~~~~~~~~~i~~i~~~p--~aGnV~ 222 (671)
.+.++..++.+|...++.-.+.|.+.++.++++|+|+|.+|...-... .+.+...+|+ +| +.|||
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~~~~~l~~~v~~l~~~~~~---------~~i~AsGGI- 238 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAYRDAHYPF---------VLLEASGNI- 238 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEESSHHHHHHHHHHTCSEEEEETCCHHHHHHHHHHHHHHCTT---------CEEEEESSC-
T ss_pred HHHHHHHHHhCCCCceEEEEcCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhhccCCC---------cEEEEECCC-
Confidence 556676666777544444467788889999999999999876221000 0001111111 33 79999
Q ss_pred cHHHHHHHHHcCCCEEEEc
Q psy3862 223 TGEMVEELILSGADVIKVG 241 (671)
Q Consensus 223 t~~~a~~li~aGAdgvkVG 241 (671)
|.+.+.+++++|||++-||
T Consensus 239 ~~~ni~~~~~aGaD~i~vG 257 (273)
T 2b7n_A 239 SLESINAYAKSGVDAISVG 257 (273)
T ss_dssp CTTTHHHHHTTTCSEEECT
T ss_pred CHHHHHHHHHcCCcEEEEc
Confidence 9999999999999988665
No 151
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=93.00 E-value=0.24 Score=55.98 Aligned_cols=43 Identities=16% Similarity=0.315 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhCCCceEEEEEeccH-----------HHHHHHHHCCCcEEEECc
Q psy3862 147 FVDFVRRIREMYPKHVIIAGNVVTG-----------EMVEELILSGADVIKVGI 189 (671)
Q Consensus 147 ~~~~ik~lr~~~P~~~li~g~v~t~-----------e~a~~Li~AGaD~IvVdg 189 (671)
..+.++++++..+....++|.+.+. +.++.++++|||.|++++
T Consensus 315 ~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~igt 368 (555)
T 1jvn_A 315 MLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGT 368 (555)
T ss_dssp HHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEEEECC
Confidence 4667777765554445667777665 669999999999999976
No 152
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=92.97 E-value=0.9 Score=45.60 Aligned_cols=128 Identities=19% Similarity=0.187 Sum_probs=64.4
Q ss_pred CcceEecCCCCCCCHHHHHHHHHcCCeEEEccC--C----CHHHHHHHHhcCc---ccc----c--------ceeeecc-
Q psy3862 332 GVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKY--Y----TLEEWKAFAVQNP---DVI----K--------HVADGGC- 389 (671)
Q Consensus 332 ~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~--~----~~e~~~~~v~~~~---~~~----~--------~v~~~~~- 389 (671)
++|+|.. +-+.+.+-+..+.+.|.=+++=-. + +++...+.++... +.+ . .+..-+.
T Consensus 74 ~iPvi~~--ggi~~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~ 151 (266)
T 2w6r_A 74 TLPIIAS--GGAGKMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGK 151 (266)
T ss_dssp CSCEEEE--SCCCSTHHHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTT
T ss_pred CCCEEEE--CCCCCHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCc
Confidence 5888883 556665556666667765555432 2 5555555544433 111 1 0111111
Q ss_pred ----cChhhH-HHHHHcCCcEEEEcccc-cccccc-ccccccccccccccccccccccCceeeccccCchhHHHHHHcCC
Q psy3862 390 ----TSPGDV-AKAMGAGADFVMLGGMF-AGHDQS-GGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGA 462 (671)
Q Consensus 390 ----~~~~~~-~~l~~aG~d~i~id~~a-~gh~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGA 462 (671)
.+..++ .++.++|++.|++-++. .|.... -+++++.++... -++-+..||+-...++.+++.+||
T Consensus 152 ~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~--------~ipvia~GGI~~~ed~~~~~~~Ga 223 (266)
T 2w6r_A 152 KNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT--------TLPIIASGGAGKMEHFLEAFLAGA 223 (266)
T ss_dssp EEEEEEHHHHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGGC--------CSCEEEESCCCSHHHHHHHHHHTC
T ss_pred eecchhHHHHHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHHc--------CCCEEEeCCCCCHHHHHHHHHcCC
Confidence 123444 55578999999984322 233211 123322222210 011134566433467777788999
Q ss_pred cEEEECc
Q psy3862 463 DFVMLGG 469 (671)
Q Consensus 463 d~V~vG~ 469 (671)
|+|+||.
T Consensus 224 dgv~vgs 230 (266)
T 2w6r_A 224 DAALAAS 230 (266)
T ss_dssp SEEEEST
T ss_pred HHHHccH
Confidence 9999996
No 153
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=92.95 E-value=2.3 Score=40.85 Aligned_cols=103 Identities=18% Similarity=0.235 Sum_probs=56.2
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHH---hCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEE
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIRE---MYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCT 196 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~---~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~ 196 (671)
+.++.+.+. +++.+.+...+.......+.++.+++ .+. ..++. + +.++.+.++|+|.|.+....-. .
T Consensus 30 ~~~~~~~~~--G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~-v~v~v-~----~~~~~a~~~gad~v~l~~~~~~--~ 99 (215)
T 1xi3_A 30 ESVREALEG--GATAIQMRIKNAPTREMYEIGKTLRQLTREYD-ALFFV-D----DRVDVALAVDADGVQLGPEDMP--I 99 (215)
T ss_dssp HHHHHHHHT--TCSEEEECCCSCCHHHHHHHHHHHHHHHHHTT-CEEEE-E----SCHHHHHHHTCSEEEECTTSCC--H
T ss_pred HHHHHHHHC--CCCEEEECCCCCCHHHHHHHHHHHHHHHHHcC-CeEEE-c----ChHHHHHHcCCCEEEECCccCC--H
Confidence 556667776 78888776543333445555555543 232 22333 2 5667788999999976322100 0
Q ss_pred EEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEEEc
Q psy3862 197 TRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 197 t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+++..+ .+..+-.+.|.+.+..+.+.|+|.+.++
T Consensus 100 ~~~~~~~~---------~~~~~v~~~t~~e~~~~~~~g~d~i~~~ 135 (215)
T 1xi3_A 100 EVAKEIAP---------NLIIGASVYSLEEALEAEKKGADYLGAG 135 (215)
T ss_dssp HHHHHHCT---------TSEEEEEESSHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHhCC---------CCEEEEecCCHHHHHHHHhcCCCEEEEc
Confidence 00100000 0012223456777777888899988775
No 154
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=92.80 E-value=0.6 Score=46.88 Aligned_cols=64 Identities=27% Similarity=0.292 Sum_probs=45.2
Q ss_pred HHHHHHHHHCCCcEEEECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.++.+.++|++.|.+-. ..|+. ..+++..+..+. .+| +.|||.+.+.++.++++||||+-||
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~-------~g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gadgv~vg 229 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTK-------SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA 229 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTC-------SCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCc-------CCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCHHHHcc
Confidence 5778899999999997632 12210 112333333332 356 7899999999999999999999999
No 155
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=92.74 E-value=0.74 Score=44.94 Aligned_cols=103 Identities=17% Similarity=0.144 Sum_probs=54.2
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHH---HHHHHHHH---HhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCc
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTF---VDFVRRIR---EMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGS 193 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~---~~~ik~lr---~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~ 193 (671)
+.++.+.+. +++.+.+....+.+..+ .+.++.++ +.+.. .++. + +.++.+.++|+|.|.+....-
T Consensus 35 ~~~~~~~~~--G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~v-~v~v-~----~~~~~a~~~gad~v~l~~~~~- 105 (227)
T 2tps_A 35 TVVQKALKG--GATLYQFREKGGDALTGEARIKFAEKAQAACREAGV-PFIV-N----DDVELALNLKADGIHIGQEDA- 105 (227)
T ss_dssp HHHHHHHHH--TCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHTC-CEEE-E----SCHHHHHHHTCSEEEECTTSS-
T ss_pred HHHHHHHHC--CCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHcCC-eEEE-c----CHHHHHHHcCCCEEEECCCcc-
Confidence 456667777 78888877554444444 44444443 22221 2222 2 456678899999997732110
Q ss_pred eEEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEEEc
Q psy3862 194 VCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 194 ~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
....+++..+ .+.++-.+.|.+.+..+.++|+|.+.+|
T Consensus 106 -~~~~~~~~~g---------~~~~~~s~~t~~e~~~a~~~g~d~v~~~ 143 (227)
T 2tps_A 106 -NAKEVRAAIG---------DMILGVSAHTMSEVKQAEEDGADYVGLG 143 (227)
T ss_dssp -CHHHHHHHHT---------TSEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred -CHHHHHHhcC---------CcEEEEecCCHHHHHHHHhCCCCEEEEC
Confidence 0000110000 0001112356666777888889988874
No 156
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=92.59 E-value=0.15 Score=65.50 Aligned_cols=45 Identities=11% Similarity=0.175 Sum_probs=39.7
Q ss_pred cceEecCCC-CCCCHHHHHHHHHcCCeEEEc--cCCCHHHHHHHHhcC
Q psy3862 333 VPIIAANMD-TVGTFEMAKHLAKHGLFTTIH--KYYTLEEWKAFAVQN 377 (671)
Q Consensus 333 iPiIaa~MD-tV~~~~mA~~la~~Gglgvih--r~~~~e~~~~~v~~~ 377 (671)
-|||-+.|- ++++.++|.+.+..||+|+|- -++++|+..++|++.
T Consensus 590 ~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~ 637 (2051)
T 2uv8_G 590 PPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSV 637 (2051)
T ss_dssp CSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHH
T ss_pred cceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHH
Confidence 599999998 777999999999999999994 478899888888764
No 157
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=92.58 E-value=0.55 Score=46.74 Aligned_cols=120 Identities=22% Similarity=0.322 Sum_probs=69.6
Q ss_pred ceEEecCCChhhHHHHHHHHHhCCCceEEEeeccC-CCChHHHHHHHHHHHhCC-CceEEEEEe----------------
Q psy3862 107 HVAVSSGISAKDLAGLKEILAALPEIEYICLDVAN-GYTQTFVDFVRRIREMYP-KHVIIAGNV---------------- 168 (671)
Q Consensus 107 ~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~-G~~~~~~~~ik~lr~~~P-~~~li~g~v---------------- 168 (671)
|+.+.-++ .+.+++.+++.+ +++.+++..+. .++. .++++.+.++ ....++-..
T Consensus 76 pvi~~ggI--~~~~~~~~~~~~--Gad~V~lg~~~l~~p~----~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~ 147 (253)
T 1thf_D 76 PFTVGGGI--HDFETASELILR--GADKVSINTAAVENPS----LITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKK 147 (253)
T ss_dssp CEEEESSC--CSHHHHHHHHHT--TCSEEEESHHHHHCTH----HHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTE
T ss_pred CEEEeCCC--CCHHHHHHHHHc--CCCEEEEChHHHhChH----HHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCcc
Confidence 55554444 345567777776 78888775431 1122 2333333332 112222222
Q ss_pred ----ccHHHHHHHHHCCCcEEEECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCE
Q psy3862 169 ----VTGEMVEELILSGADVIKVGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADV 237 (671)
Q Consensus 169 ----~t~e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdg 237 (671)
...+.++.+.++|+|.|.+-+ ..|+. ..+++.++..+. .+| +.|||.+.+.+..++++||||
T Consensus 148 ~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~-------~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadg 220 (253)
T 1thf_D 148 NTGILLRDWVVEVEKRGAGEILLTSIDRDGTK-------SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADA 220 (253)
T ss_dssp EEEEEHHHHHHHHHHTTCSEEEEEETTTTTSC-------SCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred ccCCCHHHHHHHHHHCCCCEEEEEeccCCCCC-------CCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCChH
Confidence 235778999999999887632 11210 012233333332 356 689999999999999999999
Q ss_pred EEEc
Q psy3862 238 IKVG 241 (671)
Q Consensus 238 vkVG 241 (671)
+-||
T Consensus 221 v~vG 224 (253)
T 1thf_D 221 ALAA 224 (253)
T ss_dssp EEES
T ss_pred HHHH
Confidence 9998
No 158
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=92.56 E-value=0.62 Score=44.98 Aligned_cols=104 Identities=22% Similarity=0.260 Sum_probs=59.9
Q ss_pred HHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc-CCCceEEEEeccc
Q psy3862 124 EILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI-GPGSVCTTRLKNK 202 (671)
Q Consensus 124 ~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg-a~G~~~~t~v~~~ 202 (671)
...+. +++.+++..... + .+.++++ ++ ..+++..+.|.+.+..+.+.|+|.|.++. -++.. -... .
T Consensus 81 ~a~~~--gad~v~l~~~~~-~---~~~~~~~---~~-~~~~~v~~~t~~e~~~~~~~g~d~i~~~~~~~~~~-~~~~--~ 147 (215)
T 1xi3_A 81 VALAV--DADGVQLGPEDM-P---IEVAKEI---AP-NLIIGASVYSLEEALEAEKKGADYLGAGSVFPTKT-KEDA--R 147 (215)
T ss_dssp HHHHH--TCSEEEECTTSC-C---HHHHHHH---CT-TSEEEEEESSHHHHHHHHHHTCSEEEEECSSCC-----CC--C
T ss_pred HHHHc--CCCEEEECCccC-C---HHHHHHh---CC-CCEEEEecCCHHHHHHHHhcCCCEEEEcCCccCCC-CCCC--C
Confidence 34444 678887642211 1 2233332 22 23444456787778888899999999864 11100 0000 0
Q ss_pred CCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 203 TSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 203 ~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
...+..+..+. .+| ++|||. .+.+..++++|||||-||
T Consensus 148 ~~~~~~l~~l~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vg 190 (215)
T 1xi3_A 148 VIGLEGLRKIVESVKIPVVAIGGIN-KDNAREVLKTGVDGIAVI 190 (215)
T ss_dssp CCHHHHHHHHHHHCSSCEEEESSCC-TTTHHHHHTTTCSEEEES
T ss_pred CcCHHHHHHHHHhCCCCEEEECCcC-HHHHHHHHHcCCCEEEEh
Confidence 01122222221 346 689998 999999999999999988
No 159
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=92.53 E-value=0.15 Score=51.56 Aligned_cols=112 Identities=15% Similarity=0.126 Sum_probs=61.9
Q ss_pred HHHHHHHHhCCCceEEEeeccC---CCChHHHHHHHHHHHhCCCc-eEE-EEE-eccHHHHH----HHHHCCCcEEEECc
Q psy3862 120 AGLKEILAALPEIEYICLDVAN---GYTQTFVDFVRRIREMYPKH-VII-AGN-VVTGEMVE----ELILSGADVIKVGI 189 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~---G~~~~~~~~ik~lr~~~P~~-~li-~g~-v~t~e~a~----~Li~AGaD~IvVdg 189 (671)
..+++.++...++--+++|... |....+.+-++.+++..+.. .++ --. --+.+... ...++|||+|+..+
T Consensus 99 ~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTST 178 (239)
T 3ngj_A 99 YETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTST 178 (239)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCC
Confidence 3555666663233334555432 44455566666666543321 121 111 12443333 34789999999875
Q ss_pred C--CCceEEEEecccCCcchhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEEccc
Q psy3862 190 G--PGSVCTTRLKNKTSDFFLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKVGIG 243 (671)
Q Consensus 190 a--~G~~~~t~v~~~~~~~~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG~~ 243 (671)
+ .|.. ++..++.+. .++ ++|||-|.+.+.+++++||+ |+|..
T Consensus 179 Gf~~ggA----------t~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aGA~--riGtS 229 (239)
T 3ngj_A 179 GFGTHGA----------TPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNGAS--RIGAS 229 (239)
T ss_dssp SSSSCCC----------CHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTTEE--EEEES
T ss_pred CCCCCCC----------CHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhccc--ceecc
Confidence 3 2211 111111111 133 79999999999999999999 66643
No 160
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=92.52 E-value=0.89 Score=43.95 Aligned_cols=126 Identities=18% Similarity=0.164 Sum_probs=71.3
Q ss_pred CceEEecCCCccccHHHHHHHHHcCCeEE-eecCCCHHH---HHHhhhcCcccccceEEecCCChhh-HHHHHHHHHhCC
Q psy3862 56 GVPIIAANMDTVGTFEMAKHLAKHGLFTT-IHKYYTLEE---WKAFAVQNPDVIKHVAVSSGISAKD-LAGLKEILAALP 130 (671)
Q Consensus 56 ~~Piv~a~M~~vt~~~lA~Ala~~gglgv-Ih~n~~~Ee---q~~~i~~~p~~~~~~~v~~G~~~~d-~~rl~~l~~a~~ 130 (671)
+.||....|..-.....+....+.|.=++ +|.....+. ..+..++.. .++.+.. .++.+ .++++.+.+.
T Consensus 53 ~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g---~~~~v~~-~~~~t~~~~~~~~~~~-- 126 (211)
T 3f4w_A 53 HKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG---KQVVVDM-ICVDDLPARVRLLEEA-- 126 (211)
T ss_dssp TSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT---CEEEEEC-TTCSSHHHHHHHHHHH--
T ss_pred CCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC---CeEEEEe-cCCCCHHHHHHHHHHc--
Confidence 56886655533222344666677776565 775443232 222222211 1222210 12223 3667777777
Q ss_pred CceEEEeeccCCCC-----hHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 131 EIEYICLDVANGYT-----QTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 131 ~~d~Ivld~a~G~~-----~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
+.+++.++. |.. ....+.++++++.+|...++++...+.+.++.+.++|+|.+++.+
T Consensus 127 g~d~i~v~~--g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~Gad~vvvGs 188 (211)
T 3f4w_A 127 GADMLAVHT--GTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGS 188 (211)
T ss_dssp TCCEEEEEC--CHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTCCSEEEECH
T ss_pred CCCEEEEcC--CCcccccCCCCHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcCCCEEEECH
Confidence 678887762 211 113567777777766666655543468999999999999998853
No 161
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=92.47 E-value=0.59 Score=48.41 Aligned_cols=101 Identities=12% Similarity=0.034 Sum_probs=53.5
Q ss_pred HHHHHHHHCCCcEEEECcCCCceEEEEecccCCcc-hhhhhcccc---CCccccccHHHHHHHHHcCCCEEEEcccCCCc
Q psy3862 172 EMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDF-FLIQFYSCI---PQAGNVVTGEMVEELILSGADVIKVGIGPGSV 247 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~-~~i~~i~~~---p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~ 247 (671)
+-++.|.++|+|.|.+.+ +.+. +.+ +...+. .++..+... +..+=+.+.+++..++++|+|.|+|-+.....
T Consensus 31 ~i~~~L~~~Gv~~IE~g~--~~~~-~~~-p~~~d~~~~~~~~~~~~~~~~~~l~~~~~~i~~a~~ag~~~v~i~~~~sd~ 106 (298)
T 2cw6_A 31 KLIDMLSEAGLSVIETTS--FVSP-KWV-PQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASEL 106 (298)
T ss_dssp HHHHHHHHTTCSEECCEE--CCCT-TTC-GGGTTHHHHHHHSCCCTTCBCCEECCSHHHHHHHHHTTCSEEEEEEESCHH
T ss_pred HHHHHHHHcCcCEEEECC--CcCc-ccc-cccCCHHHHHHHHhhCCCCEEEEEcCCHHhHHHHHHCCCCEEEEEecCCHH
Confidence 457788999999997753 1100 000 000010 011111111 12333357889999999999999985432222
Q ss_pred cccceecccCcch-hhhHHHHHHHhhhcCCc
Q psy3862 248 CTTRLKTGVGYPQ-FSAVLECADAAHGLGGH 277 (671)
Q Consensus 248 ~~Tr~V~gv~~~~-~~~~~~~~~~~~~~~~~ 277 (671)
- .+...+..+.+ +..+.++.++++++|.+
T Consensus 107 ~-~~~~~~~~~~e~l~~~~~~i~~a~~~G~~ 136 (298)
T 2cw6_A 107 F-TKKNINCSIEESFQRFDAILKAAQSANIS 136 (298)
T ss_dssp H-HHHHHSCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred H-HHHHhCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 1 12233333333 45667778888877644
No 162
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=92.40 E-value=0.12 Score=51.68 Aligned_cols=27 Identities=22% Similarity=0.427 Sum_probs=23.8
Q ss_pred ceeeecccChhhHHHHHHcCCcEEEEc
Q psy3862 383 HVADGGCTSPGDVAKAMGAGADFVMLG 409 (671)
Q Consensus 383 ~v~~~~~~~~~~~~~l~~aG~d~i~id 409 (671)
.+.+.||++++.+..+.++|+|.+++.
T Consensus 175 ~I~v~GGI~~~~~~~~~~aGad~vvvG 201 (230)
T 1tqj_A 175 WIEVDGGLKPNNTWQVLEAGANAIVAG 201 (230)
T ss_dssp EEEEESSCCTTTTHHHHHHTCCEEEES
T ss_pred cEEEECCcCHHHHHHHHHcCCCEEEEC
Confidence 367788898899999999999999987
No 163
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=92.40 E-value=0.77 Score=45.25 Aligned_cols=112 Identities=18% Similarity=0.118 Sum_probs=57.5
Q ss_pred HHHHHHHcCCeEE-EccC--C--CHHHHHHHHhcCcccccceeeec--ccChhhHHHHHHcCCcEEEEcccccccccccc
Q psy3862 348 MAKHLAKHGLFTT-IHKY--Y--TLEEWKAFAVQNPDVIKHVADGG--CTSPGDVAKAMGAGADFVMLGGMFAGHDQSGG 420 (671)
Q Consensus 348 mA~~la~~Gglgv-ihr~--~--~~e~~~~~v~~~~~~~~~v~~~~--~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~ 420 (671)
.+....+.|.=++ +|-. . .+++..+.+++.. +. +..+. .+..+++.. ...++|++.+++...|......
T Consensus 83 ~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g--~~-ig~~~~p~t~~e~~~~-~~~~~d~vl~~~~~pg~~g~~~ 158 (230)
T 1rpx_A 83 RVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLG--AK-AGVVLNPGTPLTAIEY-VLDAVDLVLIMSVNPGFGGQSF 158 (230)
T ss_dssp HHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTT--SE-EEEEECTTCCGGGGTT-TTTTCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcC--Cc-EEEEeCCCCCHHHHHH-HHhhCCEEEEEEEcCCCCCccc
Confidence 5555566665444 3554 2 3455666665431 11 22222 122233332 3468999988855445532211
Q ss_pred ccccccccccccccccccccC------c-eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 421 ELTNIEYMFFPLVGDMNSYLG------G-VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~------~-~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
.. .....+..+++..+ . +++|| +...++.+++.+|||+|-||.
T Consensus 159 ~~-----~~~~~i~~l~~~~~~~~~~~pi~v~GG-I~~~n~~~~~~aGad~vvvgS 208 (230)
T 1rpx_A 159 IE-----SQVKKISDLRKICAERGLNPWIEVDGG-VGPKNAYKVIEAGANALVAGS 208 (230)
T ss_dssp CT-----THHHHHHHHHHHHHHHTCCCEEEEESS-CCTTTHHHHHHHTCCEEEESH
T ss_pred cH-----HHHHHHHHHHHHHHhcCCCceEEEECC-CCHHHHHHHHHcCCCEEEECh
Confidence 10 00111222333221 1 45677 467777788899999999985
No 164
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=92.23 E-value=0.37 Score=49.62 Aligned_cols=128 Identities=15% Similarity=0.146 Sum_probs=77.1
Q ss_pred cCceEEecCCCcc------ccHHHHHHHHHcCCeEEeecCCCHHHHHHhhhcCc-ccccceEEecCCChhhHHHHHHHHH
Q psy3862 55 QGVPIIAANMDTV------GTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNP-DVIKHVAVSSGISAKDLAGLKEILA 127 (671)
Q Consensus 55 l~~Piv~a~M~~v------t~~~lA~Ala~~gglgvIh~n~~~Eeq~~~i~~~p-~~~~~~~v~~G~~~~d~~rl~~l~~ 127 (671)
.++|++. |++. +..+++..++.+|.=|+|=..+++||..++..... .-+..+.+....+ ..+|++++.+
T Consensus 96 ~~~Pivl--m~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t--~~eri~~i~~ 171 (271)
T 3nav_A 96 PETPIGL--LMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTA--SDETLRAVAQ 171 (271)
T ss_dssp TTSCEEE--EECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTC--CHHHHHHHHH
T ss_pred CCCCEEE--EecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCC--CHHHHHHHHH
Confidence 4779875 5542 33678888888888897666777776443332111 1122232221122 2467877777
Q ss_pred hCCCceEEEeeccCC-------CChHHHHHHHHHHHhCCCceEEEE-EeccHHHHHHHHHCCCcEEEECc
Q psy3862 128 ALPEIEYICLDVANG-------YTQTFVDFVRRIREMYPKHVIIAG-NVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 128 a~~~~d~Ivld~a~G-------~~~~~~~~ik~lr~~~P~~~li~g-~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
... .++..-...| .+....+.++++|+... ..+++| .+.+++.++..+++|||.++|++
T Consensus 172 ~~~--gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~-~Pv~vGfGIst~e~~~~~~~~gADgvIVGS 238 (271)
T 3nav_A 172 LGK--GYTYLLSRAGVTGAETKANMPVHALLERLQQFDA-PPALLGFGISEPAQVKQAIEAGAAGAISGS 238 (271)
T ss_dssp HCC--SCEEECCCC--------CCHHHHHHHHHHHHTTC-CCEEECSSCCSHHHHHHHHHTTCSEEEESH
T ss_pred HCC--CeEEEEeccCCCCcccCCchhHHHHHHHHHHhcC-CCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 633 3443321222 24556778888877543 345555 67799999989999999999843
No 165
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=92.07 E-value=0.59 Score=46.50 Aligned_cols=64 Identities=20% Similarity=0.185 Sum_probs=45.5
Q ss_pred HHHHHHHHHCCCcEEEECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.++.+.++|++.|.+-. ..|+. .-+++.++..+. .+| +.|||.+.+.++.++++||||+-||
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~-------~g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTK-------EGYDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAEAALAA 225 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTC-------SCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCc-------CCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCCCHHHHHH
Confidence 6888999999999886532 11210 112344443332 356 6899999999999999999999998
No 166
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=92.05 E-value=0.28 Score=47.63 Aligned_cols=109 Identities=19% Similarity=0.041 Sum_probs=56.8
Q ss_pred HHHHHHHcCCeEEEccCCCH----HHHHHHHhcCcccccceee-ecccCh-hhHHHHHHcCCcEEEEccccccccc--cc
Q psy3862 348 MAKHLAKHGLFTTIHKYYTL----EEWKAFAVQNPDVIKHVAD-GGCTSP-GDVAKAMGAGADFVMLGGMFAGHDQ--SG 419 (671)
Q Consensus 348 mA~~la~~Gglgvihr~~~~----e~~~~~v~~~~~~~~~v~~-~~~~~~-~~~~~l~~aG~d~i~id~~a~gh~~--~~ 419 (671)
++....+.|.=+++=...+. ++..+.+++.. ++.+.. ....++ +++.++.++|+|+++++-...|... ..
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~ 146 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG--KQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKP 146 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCS
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC--CeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCC
Confidence 47777777765443323332 33444443321 111111 112233 5566678899999988611112211 12
Q ss_pred cccccccccccccccccccccCc---eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 420 GELTNIEYMFFPLVGDMNSYLGG---VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~---~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
.+.++. +++.+++ .+.||+ ...++.+++++|||+|.||.
T Consensus 147 ~~~i~~----------l~~~~~~~~i~~~gGI-~~~~~~~~~~~Gad~vvvGs 188 (211)
T 3f4w_A 147 IDDLIT----------MLKVRRKARIAVAGGI-SSQTVKDYALLGPDVVIVGS 188 (211)
T ss_dssp HHHHHH----------HHHHCSSCEEEEESSC-CTTTHHHHHTTCCSEEEECH
T ss_pred HHHHHH----------HHHHcCCCcEEEECCC-CHHHHHHHHHcCCCEEEECH
Confidence 233333 3333222 356665 56666778899999999985
No 167
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=92.03 E-value=0.11 Score=52.52 Aligned_cols=99 Identities=17% Similarity=0.168 Sum_probs=61.0
Q ss_pred CceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccC--Ccchh
Q psy3862 131 EIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKT--SDFFL 208 (671)
Q Consensus 131 ~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~--~~~~~ 208 (671)
+++.+++..... + ...+|+..+...+++..+.|.+.++.+.+.|+|+|.+..--.+ ..++.. ..+..
T Consensus 112 gAdGVHLg~~dl-~------~~~~r~~~~~~~~iG~S~ht~~Ea~~A~~~GaDyI~vgpvf~T----~tK~~~~~~gl~~ 180 (243)
T 3o63_A 112 GADVLHLGQRDL-P------VNVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPT----PTKPGRAAPGLGL 180 (243)
T ss_dssp TCSEEEECTTSS-C------HHHHHHHSCTTCEEEEEECSHHHHHHHHHSSCSEEEECCSSCC----CC-----CCCHHH
T ss_pred CCCEEEecCCcC-C------HHHHHHhhCCCCEEEEeCCCHHHHHHHhhCCCCEEEEcCccCC----CCCCCcchhhHHH
Confidence 667777753321 1 1233344444456776788999999999999999988431111 111111 11222
Q ss_pred hhhc-----cccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 209 IQFY-----SCIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 209 i~~i-----~~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+..+ ..+| +.||| |.+.+..++++|||||-||
T Consensus 181 l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~ 219 (243)
T 3o63_A 181 VRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVV 219 (243)
T ss_dssp HHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEES
T ss_pred HHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEe
Confidence 2222 1356 68999 9999999999999999887
No 168
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=91.98 E-value=0.9 Score=46.59 Aligned_cols=27 Identities=15% Similarity=0.112 Sum_probs=22.6
Q ss_pred eEEEEEeccHHHHHHHHHCCCcEEEEC
Q psy3862 162 VIIAGNVVTGEMVEELILSGADVIKVG 188 (671)
Q Consensus 162 ~li~g~v~t~e~a~~Li~AGaD~IvVd 188 (671)
.+++-+..+.--|+.+.++|+|+|-+.
T Consensus 18 ~i~~~tayD~~sA~l~e~aG~d~ilvG 44 (264)
T 1m3u_A 18 RFATITAYDYSFAKLFADEGLNVMLVG 44 (264)
T ss_dssp CEEEEECCSHHHHHHHHHHTCCEEEEC
T ss_pred cEEEEeCcCHHHHHHHHHcCCCEEEEC
Confidence 355667788899999999999999994
No 169
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=91.95 E-value=0.32 Score=50.43 Aligned_cols=113 Identities=16% Similarity=0.175 Sum_probs=62.2
Q ss_pred HHHHHHHHhCCCceE--EEeeccC---CCChHHHHHHHHHHHhCCCc-eE-EEEE-eccHHH----HHHHHHCCCcEEEE
Q psy3862 120 AGLKEILAALPEIEY--ICLDVAN---GYTQTFVDFVRRIREMYPKH-VI-IAGN-VVTGEM----VEELILSGADVIKV 187 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~--Ivld~a~---G~~~~~~~~ik~lr~~~P~~-~l-i~g~-v~t~e~----a~~Li~AGaD~IvV 187 (671)
..+++.++. +++- +++|... |....+.+-++.+++..+.. .+ |--. ..+.+. ++...++|||+|+-
T Consensus 130 ~Ea~~Ai~~--GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKT 207 (288)
T 3oa3_A 130 SEAKRAMQN--GASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKT 207 (288)
T ss_dssp HHHHHHHHT--TCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHc--CCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEc
Confidence 356667776 4444 4566432 34455566666666654221 21 1111 123333 66778899999988
Q ss_pred CcCCCceEEEEecccCCcchhhhh-cc----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 188 GIGPGSVCTTRLKNKTSDFFLIQF-YS----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 188 dga~G~~~~t~v~~~~~~~~~i~~-i~----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..+=+.. ....+++.++.. +. .++ ++|||-|.+++++++++||+ |+|
T Consensus 208 STGf~~~-----GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~--RiG 261 (288)
T 3oa3_A 208 STGFNGP-----GASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAE--RLG 261 (288)
T ss_dssp CCSSSSC-----CCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCS--EEE
T ss_pred CCCCCCC-----CCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCc--eee
Confidence 6531100 000011111111 10 133 79999999999999999999 456
No 170
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=91.32 E-value=0.76 Score=45.15 Aligned_cols=64 Identities=25% Similarity=0.192 Sum_probs=44.0
Q ss_pred HHHHHHHHHCCCcEEEECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.++.+.++|+|.|.+-. ..|+. ..+++..+..+. .+| +.|||.+.+.+..++++|||++-||
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~-------~~~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vg 227 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTG-------LGYDVELIRRVADSVRIPVIASGGAGRVEHFYEAAAAGADAVLAA 227 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTC-------SCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCc-------CcCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcCCcHHHHH
Confidence 4778899999999997733 11110 001222222221 346 6899999999999999999999998
No 171
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=91.26 E-value=0.056 Score=56.51 Aligned_cols=83 Identities=16% Similarity=0.135 Sum_probs=54.8
Q ss_pred HHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc-c---cC--Ccccc
Q psy3862 148 VDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS-C---IP--QAGNV 221 (671)
Q Consensus 148 ~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~-~---~p--~aGnV 221 (671)
.+.++..++.+|...++.-.+.|.+.++.++++|+|+|.+|...- ..+++ .++.+. . +| +.|||
T Consensus 184 ~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~~~----~~l~~------~v~~l~~~~~~~~I~ASGGI 253 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEVECSSLQEAVQAAEAGADLVLLDNFKP----EELHP------TATVLKAQFPSVAVEASGGI 253 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHTTCSEEEEESCCH----HHHHH------HHHHHHHHCTTSEEEEESSC
T ss_pred HHHHHHHHHhCCcCCeEEEecCCHHHHHHHHHcCCCEEEECCCCH----HHHHH------HHHHhhccCCCeeEEEECCC
Confidence 455666666666533444466778889989999999999976220 00110 001111 1 23 79999
Q ss_pred ccHHHHHHHHHcCCCEEEEc
Q psy3862 222 VTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 222 ~t~~~a~~li~aGAdgvkVG 241 (671)
|.+.+.++.++|||++=||
T Consensus 254 -t~~ni~~~~~aGaD~i~vG 272 (299)
T 2jbm_A 254 -TLDNLPQFCGPHIDVISMG 272 (299)
T ss_dssp -CTTTHHHHCCTTCCEEECT
T ss_pred -CHHHHHHHHHCCCCEEEEC
Confidence 9999999999999988554
No 172
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=91.20 E-value=1.2 Score=45.57 Aligned_cols=25 Identities=32% Similarity=0.514 Sum_probs=20.2
Q ss_pred eccccCchhHHHHHHcCCcEEEECc
Q psy3862 445 DGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 445 ~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
.||+-.+.+++++|+.|||+|.||.
T Consensus 193 eGGI~TPsDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 193 DAGVGTASDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp ESCCCSHHHHHHHHHHTCSEEEESH
T ss_pred eCCCCCHHHHHHHHHcCCCEEEECh
Confidence 6886566666778999999999985
No 173
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=91.12 E-value=1.1 Score=47.42 Aligned_cols=112 Identities=24% Similarity=0.368 Sum_probs=69.4
Q ss_pred HHHhCCCceEEEeeccCCCC--------------------h----HHHHHHHHHHHh--CCCceEEEEEe---------c
Q psy3862 125 ILAALPEIEYICLDVANGYT--------------------Q----TFVDFVRRIREM--YPKHVIIAGNV---------V 169 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~~--------------------~----~~~~~ik~lr~~--~P~~~li~g~v---------~ 169 (671)
..++ +.|.|-++.+||+. + -..+.++.+|+. +|...++...- .
T Consensus 153 a~~a--GfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~ 230 (340)
T 3gr7_A 153 AKEA--GFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKD 230 (340)
T ss_dssp HHHH--TCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGG
T ss_pred HHHc--CCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHH
Confidence 4455 77888888887651 1 134556666654 57666666431 1
Q ss_pred cHHHHHHHHHCCCcEEEECcCCCceEEEEecccCC--cchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEEEc
Q psy3862 170 TGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTS--DFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIKVG 241 (671)
Q Consensus 170 t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~--~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-AdgvkVG 241 (671)
..+.++.|.++|+|+|.+-.+. ... ... ...+ .+..+..++ .+| ..|+|-|.+.+..+++.| ||.|-+|
T Consensus 231 ~~~la~~L~~~Gvd~i~vs~g~-~~~-~~~-~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 231 YVPYAKRMKEQGVDLVDVSSGA-IVP-ARM-NVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLG 307 (340)
T ss_dssp HHHHHHHHHHTTCCEEEEECCC-SSC-CCC-CCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEecCC-ccC-CCC-CCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEec
Confidence 2477889999999999874211 110 000 0011 122222232 356 689999999999999999 9999777
No 174
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.05 E-value=0.3 Score=51.10 Aligned_cols=101 Identities=11% Similarity=0.016 Sum_probs=53.1
Q ss_pred HHHHHHHHCCCcEEEECcCCCceEEEEecccCCcc-hhhhhccccC---CccccccHHHHHHHHHcCCCEEEEcccCCCc
Q psy3862 172 EMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDF-FLIQFYSCIP---QAGNVVTGEMVEELILSGADVIKVGIGPGSV 247 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~-~~i~~i~~~p---~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~ 247 (671)
+-++.|.++|+|.|-+.+.. +. +.+. ...+. .++..+...| +.+=+...++++.++++|+|.|++-+.....
T Consensus 32 ~i~~~L~~~Gv~~IE~g~~~-~~--~~~p-~~~d~~~~~~~~~~~~~~~~~~l~~~~~~i~~a~~~g~~~v~i~~~~sd~ 107 (307)
T 1ydo_A 32 TWINQLSRTGLSYIEITSFV-HP--KWIP-ALRDAIDVAKGIDREKGVTYAALVPNQRGLENALEGGINEACVFMSASET 107 (307)
T ss_dssp HHHHHHHTTTCSEEEEEECS-CT--TTCG-GGTTHHHHHHHSCCCTTCEEEEECCSHHHHHHHHHHTCSEEEEEEESSHH
T ss_pred HHHHHHHHcCCCEEEECCCc-Cc--cccc-ccCCHHHHHHHhhhcCCCeEEEEeCCHHhHHHHHhCCcCEEEEEeecCHH
Confidence 55778899999999885410 00 0000 00000 0111111111 2222235788999999999999988533222
Q ss_pred cccceecccCcch-hhhHHHHHHHhhhcCCc
Q psy3862 248 CTTRLKTGVGYPQ-FSAVLECADAAHGLGGH 277 (671)
Q Consensus 248 ~~Tr~V~gv~~~~-~~~~~~~~~~~~~~~~~ 277 (671)
- .+...+..+-+ +..+.++.++++++|.+
T Consensus 108 ~-~~~~l~~s~~e~l~~~~~~v~~ak~~G~~ 137 (307)
T 1ydo_A 108 H-NRKNINKSTSESLHILKQVNNDAQKANLT 137 (307)
T ss_dssp H-HHTTTCSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred H-HHHHhCCCHHHHHHHHHHHHHHHHHCCCE
Confidence 1 12234444443 45667778888877644
No 175
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=90.77 E-value=6 Score=40.84 Aligned_cols=80 Identities=21% Similarity=0.213 Sum_probs=49.4
Q ss_pred CceEEEEEeccHHHHHHHHHCCCcEEEECc-------CCCce----EEE---EecccCCcchhhhhccccC-Ccc-----
Q psy3862 160 KHVIIAGNVVTGEMVEELILSGADVIKVGI-------GPGSV----CTT---RLKNKTSDFFLIQFYSCIP-QAG----- 219 (671)
Q Consensus 160 ~~~li~g~v~t~e~a~~Li~AGaD~IvVdg-------a~G~~----~~t---~v~~~~~~~~~i~~i~~~p-~aG----- 219 (671)
.-.++++...+.=-|+...+.|+|+|++=. +.|+. +.. .+.-+.-+ .+++.++.+| .||
T Consensus 27 ~~~iig~gaGtGlsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~-evlp~v~~iPV~Agv~~~D 105 (286)
T 2p10_A 27 GEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAR-EVLPVVRHTPVLAGVNGTD 105 (286)
T ss_dssp TCCEEEEEESSHHHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHH-HHGGGCSSSCEEEEECTTC
T ss_pred CCceEEEecccchhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHH-hhhccCCCCCEEEEECCcC
Confidence 345778788899999999999999999854 22221 010 01100111 3444445556 344
Q ss_pred -ccccHHHHHHHHHcCCCEEEEc
Q psy3862 220 -NVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 220 -nV~t~~~a~~li~aGAdgvkVG 241 (671)
+.-++.-..++.++|+.|+ +-
T Consensus 106 P~~~~g~~Le~lk~~Gf~Gv-~N 127 (286)
T 2p10_A 106 PFMVMSTFLRELKEIGFAGV-QN 127 (286)
T ss_dssp TTCCHHHHHHHHHHHTCCEE-EE
T ss_pred CCcCHHHHHHHHHHhCCceE-EE
Confidence 3346677788889999999 54
No 176
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=90.73 E-value=0.64 Score=49.22 Aligned_cols=92 Identities=17% Similarity=0.127 Sum_probs=49.4
Q ss_pred HHHHHHHHHCCCcEEEEC---cCCCceEEEEecccCCcchhhhhc-c---ccC-Ccc---ccccHHHHHHHHHcCCCEEE
Q psy3862 171 GEMVEELILSGADVIKVG---IGPGSVCTTRLKNKTSDFFLIQFY-S---CIP-QAG---NVVTGEMVEELILSGADVIK 239 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVd---ga~G~~~~t~v~~~~~~~~~i~~i-~---~~p-~aG---nV~t~~~a~~li~aGAdgvk 239 (671)
.+-++.|.++|+|.|-+. |.+|++.... -....++..+..+ . ..| .+= |.++.+.++.+.++|+|+++
T Consensus 33 ~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g-~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~ 111 (345)
T 1nvm_A 33 RAIARALDKAKVDSIEVAHGDGLQGSSFNYG-FGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGARVVR 111 (345)
T ss_dssp HHHHHHHHHHTCSEEECSCTTSTTCCBTTTB-CCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCCccc-CCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCCcCEEE
Confidence 366788999999999985 3333220000 0000011111111 1 111 111 45678899999999999999
Q ss_pred EcccCCCccccceecccCcchhhhHHHHHHHhhhcCCc
Q psy3862 240 VGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGH 277 (671)
Q Consensus 240 VG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~ 277 (671)
|-.. .+. ..-..++.++|+++|..
T Consensus 112 I~~~-----~s~---------~~~~~~~i~~ak~~G~~ 135 (345)
T 1nvm_A 112 VATH-----CTE---------ADVSKQHIEYARNLGMD 135 (345)
T ss_dssp EEEE-----TTC---------GGGGHHHHHHHHHHTCE
T ss_pred EEEe-----ccH---------HHHHHHHHHHHHHCCCE
Confidence 9631 111 12356667777766543
No 177
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=90.71 E-value=0.54 Score=48.76 Aligned_cols=83 Identities=28% Similarity=0.330 Sum_probs=57.3
Q ss_pred HHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc-ccC--CccccccH
Q psy3862 148 VDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS-CIP--QAGNVVTG 224 (671)
Q Consensus 148 ~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~-~~p--~aGnV~t~ 224 (671)
.+.++..|+.+|...++...+.+.++++.++++|+|+|.+|--.- +.++ ..++.+. .+| +.||| |.
T Consensus 183 ~~av~~ar~~~~~~~~IgVev~t~eea~eA~~aGaD~I~ld~~~~----~~~k------~av~~v~~~ipi~AsGGI-t~ 251 (286)
T 1x1o_A 183 GEAVRRAKARAPHYLKVEVEVRSLEELEEALEAGADLILLDNFPL----EALR------EAVRRVGGRVPLEASGNM-TL 251 (286)
T ss_dssp HHHHHHHHHHSCTTSCEEEEESSHHHHHHHHHHTCSEEEEESCCH----HHHH------HHHHHHTTSSCEEEESSC-CH
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCCH----HHHH------HHHHHhCCCCeEEEEcCC-CH
Confidence 445666677777655555577889999999999999997764211 0011 0111221 345 68998 78
Q ss_pred HHHHHHHHcCCCEEEEc
Q psy3862 225 EMVEELILSGADVIKVG 241 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG 241 (671)
+.+.++.++|+|++-||
T Consensus 252 eni~~~a~tGvD~IsVg 268 (286)
T 1x1o_A 252 ERAKAAAEAGVDYVSVG 268 (286)
T ss_dssp HHHHHHHHHTCSEEECT
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 99999999999999876
No 178
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=90.59 E-value=1.4 Score=45.11 Aligned_cols=112 Identities=16% Similarity=0.142 Sum_probs=60.4
Q ss_pred HHHHHHHHhCCCceEEEeeccC---CCChHHHHHHHHHHHhCCCce-EEE-EE-eccH----HHHHHHHHCCCcEEEECc
Q psy3862 120 AGLKEILAALPEIEYICLDVAN---GYTQTFVDFVRRIREMYPKHV-IIA-GN-VVTG----EMVEELILSGADVIKVGI 189 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~---G~~~~~~~~ik~lr~~~P~~~-li~-g~-v~t~----e~a~~Li~AGaD~IvVdg 189 (671)
..+++.+....++--+++|... |....+.+-++.+++..+... ++- -. -.|. ...+...++|||+|+..+
T Consensus 115 ~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTST 194 (260)
T 3r12_A 115 HEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTST 194 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCC
Confidence 3455666663232234555432 333445555666655543221 111 11 1122 445567789999998876
Q ss_pred CCCceEEEEecccCCcchhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 190 GPGSVCTTRLKNKTSDFFLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 190 a~G~~~~t~v~~~~~~~~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+=+.. ..++..+..+. .++ ++|||-|.+++.+++++||+ |+|
T Consensus 195 Gf~~~--------GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~--RiG 243 (260)
T 3r12_A 195 GFGTG--------GATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGAD--RIG 243 (260)
T ss_dssp SSSSC--------CCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCS--EEE
T ss_pred CCCCC--------CCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCc--eee
Confidence 42110 00111111111 133 79999999999999999999 556
No 179
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=90.57 E-value=1.5 Score=42.60 Aligned_cols=68 Identities=24% Similarity=0.300 Sum_probs=40.5
Q ss_pred HHHHHHHhCCCceEEEeeccCCC-ChH---HHHHHHHHHHhCCCceEEEEEeccH-HHHHHHHHCCCcEEEECcC
Q psy3862 121 GLKEILAALPEIEYICLDVANGY-TQT---FVDFVRRIREMYPKHVIIAGNVVTG-EMVEELILSGADVIKVGIG 190 (671)
Q Consensus 121 rl~~l~~a~~~~d~Ivld~a~G~-~~~---~~~~ik~lr~~~P~~~li~g~v~t~-e~a~~Li~AGaD~IvVdga 190 (671)
.++.+.+. +++.+.++...|. ... -.+.++++++..+....+..-+.+. +.++.+.++|+|.|.+.+.
T Consensus 21 ~~~~~~~~--G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~ 93 (220)
T 2fli_A 21 ELARIEET--DAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTE 93 (220)
T ss_dssp HHHHHHHT--TCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHc--CCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccC
Confidence 34445555 6777777765554 221 1577777776543222333344443 4678999999999987443
No 180
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=90.53 E-value=0.14 Score=53.47 Aligned_cols=91 Identities=18% Similarity=0.169 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccccC--CccccccH
Q psy3862 147 FVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIP--QAGNVVTG 224 (671)
Q Consensus 147 ~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p--~aGnV~t~ 224 (671)
..+.++..++.+|...++.-.+.|.+.++.++++|+|+|.+|...-. ..++..+....-. +-...+| +.||| |.
T Consensus 185 i~~ai~~~r~~~~~~~~i~vev~tlee~~~A~~aGaD~I~ld~~~~~-~l~~~v~~l~~~~--~g~~~v~I~ASGGI-t~ 260 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEVECLSEDEATEAIEAGADVIMLDNFKGD-GLKMCAQSLKNKW--NGKKHFLLECSGGL-NL 260 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECSSSHHHHHHHHHTCSEEECCC------------------------CCEEEEECCC-CC
T ss_pred HHHHHHHHHHhcCcCCeEEEecCCHHHHHHHHHcCCCEEEECCCCHH-HHHHHHHHhcccc--cCCCCeEEEEECCC-CH
Confidence 34556666666775334444667778888889999999999873211 1111111110000 0000023 79999 99
Q ss_pred HHHHHHHHcCCCEEEEc
Q psy3862 225 EMVEELILSGADVIKVG 241 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG 241 (671)
+.+.++.++|||++=||
T Consensus 261 ~ni~~~~~~GvD~i~vG 277 (294)
T 3c2e_A 261 DNLEEYLCDDIDIYSTS 277 (294)
T ss_dssp ------CCCSCSEEECG
T ss_pred HHHHHHHHcCCCEEEEe
Confidence 99999999999988665
No 181
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=90.50 E-value=0.29 Score=47.86 Aligned_cols=95 Identities=18% Similarity=0.220 Sum_probs=57.0
Q ss_pred CceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEE----CcC--CCceEEEEecccCC
Q psy3862 131 EIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKV----GIG--PGSVCTTRLKNKTS 204 (671)
Q Consensus 131 ~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvV----dga--~G~~~~t~v~~~~~ 204 (671)
+++.+++.... .. +.++++.++. .++.....+.+.++.+.+.|+|+|.+ ++. +|+. ...
T Consensus 94 gad~v~l~~~~---~~----~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~-------~~~ 158 (227)
T 2tps_A 94 KADGIHIGQED---AN----AKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTR-------AVQ 158 (227)
T ss_dssp TCSEEEECTTS---SC----HHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCC-------CCC
T ss_pred CCCEEEECCCc---cC----HHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCC-------Ccc
Confidence 67888774221 11 2333333333 34444566777788888999999986 221 1100 000
Q ss_pred cchhhhhcc---c-cC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 205 DFFLIQFYS---C-IP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 205 ~~~~i~~i~---~-~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+..+..+. . +| ++|||. .+.+..++++|||||-||
T Consensus 159 ~~~~l~~~~~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vg 200 (227)
T 2tps_A 159 GVSLIEAVRRQGISIPIVGIGGIT-IDNAAPVIQAGADGVSMI 200 (227)
T ss_dssp TTHHHHHHHHTTCCCCEEEESSCC-TTTSHHHHHTTCSEEEES
T ss_pred CHHHHHHHHHhCCCCCEEEEcCCC-HHHHHHHHHcCCCEEEEh
Confidence 111222221 2 56 689998 889999999999999888
No 182
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=90.34 E-value=0.42 Score=49.34 Aligned_cols=21 Identities=33% Similarity=0.135 Sum_probs=18.6
Q ss_pred cccHHHHHHHHHcCCCEEEEc
Q psy3862 221 VVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 221 V~t~~~a~~li~aGAdgvkVG 241 (671)
|.+.+||+-+=++||.+|.+=
T Consensus 18 v~~~eqa~iae~aGa~av~~l 38 (291)
T 3o07_A 18 VVTPEQAKIAEKSGACAVMAL 38 (291)
T ss_dssp ESSHHHHHHHHHHTCSEEEEC
T ss_pred cCCHHHHHHHHHhCchhhhhc
Confidence 568999999999999999765
No 183
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=90.29 E-value=1.1 Score=45.30 Aligned_cols=111 Identities=17% Similarity=0.147 Sum_probs=53.8
Q ss_pred HHHcCCeEEEccCCC---HHHHHHHHhcCccccccee-eecccChhhHHHHHHcCCcEEEEccccccccccccccccccc
Q psy3862 352 LAKHGLFTTIHKYYT---LEEWKAFAVQNPDVIKHVA-DGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEY 427 (671)
Q Consensus 352 la~~Gglgvihr~~~---~e~~~~~v~~~~~~~~~v~-~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~ 427 (671)
+.+.|.=|++--..+ ++++.+.++++. ++.+. .+-.+.++++..+.+.+.+++.+. +..|++-..-.. ..
T Consensus 114 a~~aGadgv~v~d~~~~~~~~~~~~~~~~g--~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~-s~~G~tG~~~~~---~~ 187 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLPYVAAHSLWSEAKNNN--LELVLLTTPAIPEDRMKEITKASEGFVYLV-SVNGVTGPRANV---NP 187 (262)
T ss_dssp HHHTTCCEEECTTCBTTTHHHHHHHHHHTT--CEECEEECTTSCHHHHHHHHHHCCSCEEEE-CSSCCBCTTSCB---CT
T ss_pred HHHcCCCEEEEcCCChhhHHHHHHHHHHcC--CceEEEECCCCCHHHHHHHHhcCCCeEEEe-cCCCCCCCCcCC---Cc
Confidence 555666555544444 444554444321 11111 112233466666666677777776 344543221010 00
Q ss_pred cccccccccccccC-c-eeeccccCchhH-HHHHHcCCcEEEECc
Q psy3862 428 MFFPLVGDMNSYLG-G-VVDGGCTSPGDV-AKAMGAGADFVMLGG 469 (671)
Q Consensus 428 ~~~~~~~~~~~~~~-~-~i~gG~v~t~~~-a~~l~aGAd~V~vG~ 469 (671)
.....+..+++... . .+.|| +.+.+. .+++.+|||+|.||.
T Consensus 188 ~~~~~i~~v~~~~~~pI~vgGG-I~~~e~~~~~~~~GAdgvvVGS 231 (262)
T 1rd5_A 188 RVESLIQEVKKVTNKPVAVGFG-ISKPEHVKQIAQWGADGVIIGS 231 (262)
T ss_dssp HHHHHHHHHHHHCSSCEEEESC-CCSHHHHHHHHHTTCSEEEECH
T ss_pred hHHHHHHHHHhhcCCeEEEECC-cCCHHHHHHHHHcCCCEEEECh
Confidence 01112333344332 2 34555 564544 556789999999995
No 184
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=90.22 E-value=1.1 Score=47.70 Aligned_cols=138 Identities=22% Similarity=0.269 Sum_probs=91.9
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEe
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRL 199 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v 199 (671)
+++..+.++ +.+.+=+... ...-.+.++.+++..| .++++=--.+...|...+++|+|.+.+.
T Consensus 50 ~Qi~~l~~a--G~diVRvavp---~~~~a~al~~I~~~~~-vPlvaDiHf~~~lal~a~e~G~dklRIN----------- 112 (366)
T 3noy_A 50 NQIKRLYEA--GCEIVRVAVP---HKEDVEALEEIVKKSP-MPVIADIHFAPSYAFLSMEKGVHGIRIN----------- 112 (366)
T ss_dssp HHHHHHHHT--TCCEEEEECC---SHHHHHHHHHHHHHCS-SCEEEECCSCHHHHHHHHHTTCSEEEEC-----------
T ss_pred HHHHHHHHc--CCCEEEeCCC---ChHHHHHHHHHHhcCC-CCEEEeCCCCHHHHHHHHHhCCCeEEEC-----------
Confidence 466677777 6676654322 2445677888877764 3455533478889999999999999662
Q ss_pred cccCCcchhhhhccccCCccccccHHHHHHHHHcCCC---EEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCC
Q psy3862 200 KNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGAD---VIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGG 276 (671)
Q Consensus 200 ~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAd---gvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~ 276 (671)
-||+++.+..+.++++=.+ .+|||+..||.- .+...--|.|...|..|.|..--
T Consensus 113 ------------------PGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~-~~ll~~yg~~~~eamVeSAl~~~---- 169 (366)
T 3noy_A 113 ------------------PGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLE-KDLLEKYGYPSAEALAESALRWS---- 169 (366)
T ss_dssp ------------------HHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCC-HHHHHHHSSCCHHHHHHHHHHHH----
T ss_pred ------------------CcccCchhHHHHHHHHHHHcCCCEEEecCCcCCC-HHHHHhcCCCCHHHHHHHHHHHH----
Confidence 4788877777666654333 789999999975 45556667676666666542211
Q ss_pred cchhhhhhccceeeccccCCCceeeeecCCCccC
Q psy3862 277 HIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLK 310 (671)
Q Consensus 277 ~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~ 310 (671)
+.-..++|+|+.|=.|-|++.
T Consensus 170 -------------~~~e~~gf~~iviS~K~S~v~ 190 (366)
T 3noy_A 170 -------------EKFEKWGFTNYKVSIKGSDVL 190 (366)
T ss_dssp -------------HHHHHTTCCCEEEEEECSSHH
T ss_pred -------------HHHHhCCCCeEEEeeecCChH
Confidence 112357899999888877554
No 185
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=90.18 E-value=0.59 Score=47.21 Aligned_cols=110 Identities=13% Similarity=0.081 Sum_probs=61.1
Q ss_pred HHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCC
Q psy3862 125 ILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTS 204 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~ 204 (671)
..++ +++.+++... ......+.++.+++..-..........+.++++.+.+.+.+++.+.+..|+.- .++.++
T Consensus 114 a~~a--Gadgv~v~d~--~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG---~~~~~~ 186 (262)
T 1rd5_A 114 MKEA--GVHGLIVPDL--PYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTG---PRANVN 186 (262)
T ss_dssp HHHT--TCCEEECTTC--BTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBC---TTSCBC
T ss_pred HHHc--CCCEEEEcCC--ChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCC---CCcCCC
Confidence 5555 7786665322 12333444444444321111122222346777777777777776655444210 111111
Q ss_pred --cchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 205 --DFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 205 --~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+..+..+. .+| +.|||.|.+.+..++++|||++-||
T Consensus 187 ~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 187 PRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIG 230 (262)
T ss_dssp THHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred chHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 112333332 356 7999999999999999999999999
No 186
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=89.92 E-value=0.44 Score=48.99 Aligned_cols=90 Identities=20% Similarity=0.195 Sum_probs=53.9
Q ss_pred CcccceeeeeeccCCceeeCcceEecC-CCCCCCHHHHHHH--HHcCCeE-----------------------EEc----
Q psy3862 313 SEVDITRTFTFRNSGKTYQGVPIIAAN-MDTVGTFEMAKHL--AKHGLFT-----------------------TIH---- 362 (671)
Q Consensus 313 ~eVdl~~~l~~~~s~~~~~~iPiIaa~-MDtV~~~~mA~~l--a~~Gglg-----------------------vih---- 362 (671)
+++||+++|- .+.+.-||+-|+ ||..++ ++...+ ..+|.+. .++
T Consensus 3 ~~~~l~~~~~-----g~~l~npi~~aag~~~~~~-~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~ 76 (311)
T 1ep3_A 3 ENNRLSVKLP-----GLDLKNPIIPASGCFGFGE-EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGL 76 (311)
T ss_dssp CCTTTCEEET-----TEEESSSEEECTTSSTTST-TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCC
T ss_pred CCCccceEEC-----CEECCCCcEECCCCCCCCH-HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCC
Confidence 7899999885 688999999999 999876 454444 3445442 134
Q ss_pred cCCCHHHHHHH----Hhc-CcccccceeeecccChhhHHH---HHH--cCCcEEEEc
Q psy3862 363 KYYTLEEWKAF----AVQ-NPDVIKHVADGGCTSPGDVAK---AMG--AGADFVMLG 409 (671)
Q Consensus 363 r~~~~e~~~~~----v~~-~~~~~~~v~~~~~~~~~~~~~---l~~--aG~d~i~id 409 (671)
.|.+++++.+. +++ .++ .+...-.++...+++.+ .++ +|+|.|-|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~-~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~ 132 (311)
T 1ep3_A 77 QNPGLEVIMTEKLPWLNENFPE-LPIIANVAGSEEADYVAVCAKIGDAANVKAIELN 132 (311)
T ss_dssp CBCCHHHHHHTHHHHHHHHCTT-SCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEE
T ss_pred CCcCHHHHHHHHHHHHHhcCCC-CcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEe
Confidence 35677777543 332 222 11122222334455433 344 899999885
No 187
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=89.89 E-value=0.19 Score=51.74 Aligned_cols=134 Identities=16% Similarity=0.096 Sum_probs=76.6
Q ss_pred eCcceEe----cCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCccc-ccceee-ecccChhhHHHHHHcCCc
Q psy3862 331 QGVPIIA----ANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDV-IKHVAD-GGCTSPGDVAKAMGAGAD 404 (671)
Q Consensus 331 ~~iPiIa----a~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~-~~~v~~-~~~~~~~~~~~l~~aG~d 404 (671)
.++||+- .+++..+..+++..+...|.=|+|---.++|+..+++...++. +..+.- +-.+++++++.+.+.+..
T Consensus 90 ~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~g 169 (271)
T 1ujp_A 90 TEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATG 169 (271)
T ss_dssp CCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCS
T ss_pred CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCC
Confidence 4688887 2255556678899999999998988766666554444332211 111211 122446777887776666
Q ss_pred EEEEccccccccccccccccccccccccccccccccC-ceeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 405 FVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLG-GVVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 405 ~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
|+.+. +..|++-..-.. .......++.+|++.. .++.||-+.+.+.++.+ .|||+|.||.
T Consensus 170 fiy~v-s~~G~TG~~~~~---~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~-~~ADgVIVGS 230 (271)
T 1ujp_A 170 FVYAV-SVTGVTGMRERL---PEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA-AVADGVVVGS 230 (271)
T ss_dssp CEEEE-CC---------------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH-TTSSEEEECH
T ss_pred CEEEE-ecCcccCCCCCC---CccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh-cCCCEEEECh
Confidence 77665 444443111100 0011112344555543 26677778888888878 9999999994
No 188
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=89.84 E-value=0.1 Score=52.34 Aligned_cols=64 Identities=27% Similarity=0.323 Sum_probs=0.0
Q ss_pred HHHHHHHHHCCCcEEEECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.++.+.++|+|.|.+-. ..|+. .-+++.++..+. .+| +.|||.|.+.+..++++|||+|-||
T Consensus 159 ~~~a~~~~~~G~~~i~~t~~~~~g~~-------~g~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~~~~~Gad~v~vg 229 (247)
T 3tdn_A 159 RDWVVEVEKRGAGEILLTSIDRDGTK-------SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSIN 229 (247)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCEEEEecccCCCCc-------CCCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHcCCcHhhcc
Confidence 3567788899999997643 11210 001222222221 245 7999999999999999999999888
No 189
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=89.83 E-value=0.83 Score=46.87 Aligned_cols=114 Identities=13% Similarity=0.046 Sum_probs=63.8
Q ss_pred HHHHHHHhCCCceEE-EeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc-CCCceEEEE
Q psy3862 121 GLKEILAALPEIEYI-CLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI-GPGSVCTTR 198 (671)
Q Consensus 121 rl~~l~~a~~~~d~I-vld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg-a~G~~~~t~ 198 (671)
.+++..++ +++.+ +.|...+....+.+.+++ ..-....++.-..+.++++.+.+.+-++|-.=+ .+.+...+.
T Consensus 115 f~~~~~~a--Gvdgvii~Dlp~ee~~~~~~~~~~---~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~ 189 (267)
T 3vnd_A 115 FYTKAQAA--GVDSVLIADVPVEESAPFSKAAKA---HGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESK 189 (267)
T ss_dssp HHHHHHHH--TCCEEEETTSCGGGCHHHHHHHHH---TTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC-----
T ss_pred HHHHHHHc--CCCEEEeCCCCHhhHHHHHHHHHH---cCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccC
Confidence 45666677 78874 445444444444444443 221112233223457899988888766765533 332322111
Q ss_pred ecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 199 LKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 199 v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.... -...+..++ .+| ++|||.|.++++.++.+||||+-||
T Consensus 190 ~~~~--~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 190 AGEP--IENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp ---C--HHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CcHH--HHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 1100 011222221 356 7999999999999999999999999
No 190
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.66 E-value=1.8 Score=44.53 Aligned_cols=103 Identities=16% Similarity=-0.009 Sum_probs=53.9
Q ss_pred HHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccCCccccccHHHHHHHHHcCCCEEEEcccCCCcc
Q psy3862 172 EMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVC 248 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~ 248 (671)
+-+++|.++|++.|.+.+ ..+. +.+.........+..+. .+|++.-+.+.++++.++++|++.|++-+ ++|--
T Consensus 30 ~i~~~L~~~Gv~~IE~g~-~~~~--~~~p~~~~~~e~~~~i~~~~~~~v~~l~~n~~~i~~a~~~G~~~V~i~~-~~S~~ 105 (295)
T 1ydn_A 30 ALINRLSDCGYARIEATS-FVSP--KWVPQLADSREVMAGIRRADGVRYSVLVPNMKGYEAAAAAHADEIAVFI-SASEG 105 (295)
T ss_dssp HHHHHHTTTTCSEEEEEE-CSCT--TTCGGGTTHHHHHHHSCCCSSSEEEEECSSHHHHHHHHHTTCSEEEEEE-ESCHH
T ss_pred HHHHHHHHcCcCEEEEcc-CcCc--cccccccCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHCCCCEEEEEE-ecCHH
Confidence 446778889999997743 1111 00000000111212221 12332223568999999999999998864 33411
Q ss_pred ccceecccCcc-hhhhHHHHHHHhhhcCCcc
Q psy3862 249 TTRLKTGVGYP-QFSAVLECADAAHGLGGHI 278 (671)
Q Consensus 249 ~Tr~V~gv~~~-~~~~~~~~~~~~~~~~~~~ 278 (671)
-.+......+. .+..+.++.+.|+++|.++
T Consensus 106 h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V 136 (295)
T 1ydn_A 106 FSKANINCTIAESIERLSPVIGAAINDGLAI 136 (295)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 11112222233 3455677788888876543
No 191
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=89.57 E-value=1.8 Score=45.77 Aligned_cols=113 Identities=24% Similarity=0.350 Sum_probs=67.1
Q ss_pred HHHhCCCceEEEeeccCCCC--------------------h----HHHHHHHHHHHhC----CCceEEEEE-----ecc-
Q psy3862 125 ILAALPEIEYICLDVANGYT--------------------Q----TFVDFVRRIREMY----PKHVIIAGN-----VVT- 170 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~~--------------------~----~~~~~ik~lr~~~----P~~~li~g~-----v~t- 170 (671)
..++ +.|.|-++.+||+. + -..+.++.+|+.. |...++-.. ..+
T Consensus 161 a~~a--GfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~ 238 (349)
T 3hgj_A 161 ALRA--GFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSL 238 (349)
T ss_dssp HHHT--TCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCH
T ss_pred HHHc--CCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCH
Confidence 3444 78888888888652 1 1345666666643 444445432 112
Q ss_pred ---HHHHHHHHHCCCcEEEECcCCCceEEEEecccCC--cchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEE
Q psy3862 171 ---GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTS--DFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIK 239 (671)
Q Consensus 171 ---~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~--~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-Adgvk 239 (671)
.+.++.|.++|+|+|.+-.+ +......+ ...+ .+..+..++ .+| ..|++-|.+.+..+++.| ||.|-
T Consensus 239 ~~~~~la~~L~~~Gvd~i~vs~g-~~~~~~~~-~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~ 316 (349)
T 3hgj_A 239 EDTLAFARRLKELGVDLLDCSSG-GVVLRVRI-PLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVL 316 (349)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECC-CSCSSSCC-CCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecC-CcCccccc-CCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEE
Confidence 35588899999999987431 11000000 0011 122222232 356 689999999999999999 99997
Q ss_pred Ec
Q psy3862 240 VG 241 (671)
Q Consensus 240 VG 241 (671)
+|
T Consensus 317 iG 318 (349)
T 3hgj_A 317 LG 318 (349)
T ss_dssp ES
T ss_pred ec
Confidence 76
No 192
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=88.86 E-value=1.7 Score=45.15 Aligned_cols=47 Identities=11% Similarity=0.160 Sum_probs=32.5
Q ss_pred HHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchh
Q psy3862 226 MVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIIS 280 (671)
Q Consensus 226 ~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~ 280 (671)
.+++++++|||+|.+=+-.||-- -.-++..+.++.++|+++|.++|.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~--------~~~~l~~i~~v~~~a~~~GlpvIi 176 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEY--------EHQSIKNIIQLVDAGMKVGMPTMA 176 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTT--------HHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred HHHHHHHCCCCEEEEEEECCCCc--------HHHHHHHHHHHHHHHHHcCCEEEE
Confidence 46778899999998877666321 123666777888888877655444
No 193
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=88.65 E-value=1.7 Score=46.22 Aligned_cols=113 Identities=21% Similarity=0.260 Sum_probs=67.5
Q ss_pred HHHhCCCceEEEeeccCCCC--------------------hH----HHHHHHHHHHh----CCCceEEEEEe------cc
Q psy3862 125 ILAALPEIEYICLDVANGYT--------------------QT----FVDFVRRIREM----YPKHVIIAGNV------VT 170 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~~--------------------~~----~~~~ik~lr~~----~P~~~li~g~v------~t 170 (671)
..++ +.|.|-++.+||+. ++ ..+.++.+|+. +|...++...- .+
T Consensus 167 a~~a--GfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~ 244 (363)
T 3l5l_A 167 ARDA--GFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQT 244 (363)
T ss_dssp HHHH--TCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHH
T ss_pred HHHc--CCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCC
Confidence 4455 77888888888752 11 34556666654 34455565431 11
Q ss_pred ----HHHHHHHHHCCCcEEEECcCCCceEEEEecccCC--cchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEE
Q psy3862 171 ----GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTS--DFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVI 238 (671)
Q Consensus 171 ----~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~--~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-Adgv 238 (671)
.+.++.|.++|+|+|.+-.+.-.. .... ...+ .++.+..++ .+| ..|+|-|.+.+..+++.| ||.|
T Consensus 245 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~-~~~~-~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V 322 (363)
T 3l5l_A 245 LEESIELARRFKAGGLDLLSVSVGFTIP-DTNI-PWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLV 322 (363)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSS-CCCC-CCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCcccc-cccc-CCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEE
Confidence 355888999999999774321000 0000 0011 122222332 356 689999999999999999 9999
Q ss_pred EEc
Q psy3862 239 KVG 241 (671)
Q Consensus 239 kVG 241 (671)
-+|
T Consensus 323 ~iG 325 (363)
T 3l5l_A 323 SVG 325 (363)
T ss_dssp ECC
T ss_pred Eec
Confidence 666
No 194
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=88.52 E-value=1.3 Score=44.76 Aligned_cols=69 Identities=23% Similarity=0.213 Sum_probs=39.4
Q ss_pred ccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceee
Q psy3862 222 VTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVM 301 (671)
Q Consensus 222 ~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVl 301 (671)
.|.+.+++|.++|||.+-+|+ | .|+- ...+.+..++.++..++||-|--.. +.. ..-=|.+
T Consensus 21 ~t~~~~~~l~~~GaD~ielG~---S-------~Gvt---~~~~~~~v~~ir~~~~Pivlm~y~~-----n~i-~~G~dg~ 81 (240)
T 1viz_A 21 LPDEQLEILCESGTDAVIIGG---S-------DGVT---EDNVLRMMSKVRRFLVPCVLEVSAI-----EAI-VPGFDLY 81 (240)
T ss_dssp CCHHHHHHHHTSCCSEEEECC--------------C---HHHHHHHHHHHTTSSSCEEEECSCG-----GGC-CSCCSEE
T ss_pred ccHHHHHHHHHcCCCEEEECC---C-------CCCC---HHHHHHHHHHhhCcCCCEEEecCcc-----ccc-cCCCCEE
Confidence 356678899999999999997 2 2222 2335566555555677887522210 111 1233577
Q ss_pred eecCCCcc
Q psy3862 302 LRPKRSTL 309 (671)
Q Consensus 302 l~P~rst~ 309 (671)
|+|.-..-
T Consensus 82 iiPdLp~e 89 (240)
T 1viz_A 82 FIPSVLNS 89 (240)
T ss_dssp EEEEETTB
T ss_pred EEcccCcc
Confidence 77765443
No 195
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=88.06 E-value=0.79 Score=47.54 Aligned_cols=83 Identities=17% Similarity=0.304 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc-ccC--Ccccccc
Q psy3862 147 FVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS-CIP--QAGNVVT 223 (671)
Q Consensus 147 ~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~-~~p--~aGnV~t 223 (671)
+.+.++..|+..|...+.+ -+.|.++++.++++|+|+|.+|.-.-. .+++ .++.+. .++ +.||| |
T Consensus 185 i~~Av~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn~~~~----~l~~------av~~~~~~v~ieaSGGI-t 252 (287)
T 3tqv_A 185 IAKAVTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDNFSGE----DIDI------AVSIARGKVALEVSGNI-D 252 (287)
T ss_dssp HHHHHHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESCCHH----HHHH------HHHHHTTTCEEEEESSC-C
T ss_pred HHHHHHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcCCCHH----HHHH------HHHhhcCCceEEEECCC-C
Confidence 4566676666666544444 678889999999999999988652110 0110 011111 122 78998 8
Q ss_pred HHHHHHHHHcCCCEEEEc
Q psy3862 224 GEMVEELILSGADVIKVG 241 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG 241 (671)
.+.+.++.++|+|.+-||
T Consensus 253 ~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 253 RNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp TTTHHHHHTTTCSEEECS
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 889999999999999887
No 196
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=87.96 E-value=2.1 Score=45.09 Aligned_cols=113 Identities=19% Similarity=0.321 Sum_probs=69.6
Q ss_pred HHHHhCCCceEEEeeccCCCC------------------------hHHHHHHHHHHHh--CCCceEEEEEe-----c---
Q psy3862 124 EILAALPEIEYICLDVANGYT------------------------QTFVDFVRRIREM--YPKHVIIAGNV-----V--- 169 (671)
Q Consensus 124 ~l~~a~~~~d~Ivld~a~G~~------------------------~~~~~~ik~lr~~--~P~~~li~g~v-----~--- 169 (671)
.+.++ +.|.|-++.+||+. +-..+.++.+++. +|...++...- .
T Consensus 152 ~a~~a--GfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~ 229 (338)
T 1z41_A 152 RAKEA--GFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIA 229 (338)
T ss_dssp HHHHT--TCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHH
T ss_pred HHHHc--CCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHH
Confidence 34455 77888888777641 1135556666664 56666665421 1
Q ss_pred -cHHHHHHHHHCCCcEEEECcCCCceEEEEecccCC--cchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEEE
Q psy3862 170 -TGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTS--DFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIKV 240 (671)
Q Consensus 170 -t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~--~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-AdgvkV 240 (671)
..+.++.|.++|+|+|.+-...-.. ... ...+ .+..+..++ .+| ..|+|-|.+.+..+++.| ||.|-+
T Consensus 230 ~~~~~a~~l~~~Gvd~i~v~~~~~~~--~~~-~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 230 DHIGFAKWMKEQGVDLIDCSSGALVH--ADI-NVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSSC--CCC-CCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCcccc--CCC-CCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEee
Confidence 2367888999999999874321100 000 0011 122333332 356 689999999999999999 999987
Q ss_pred c
Q psy3862 241 G 241 (671)
Q Consensus 241 G 241 (671)
|
T Consensus 307 G 307 (338)
T 1z41_A 307 G 307 (338)
T ss_dssp C
T ss_pred c
Confidence 7
No 197
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=87.88 E-value=0.41 Score=50.42 Aligned_cols=83 Identities=22% Similarity=0.290 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhc-cccC--Ccccccc
Q psy3862 147 FVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFY-SCIP--QAGNVVT 223 (671)
Q Consensus 147 ~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i-~~~p--~aGnV~t 223 (671)
+.+.++..++.+|.. ++.--+.|.+.++.++++|+|+|.+|...-. .+++ .+..+ ..++ +.||| |
T Consensus 218 i~~Av~~ar~~~p~~-kIeVEVdtldea~eAl~aGaD~I~LDn~~~~----~l~~------av~~l~~~v~ieaSGGI-t 285 (320)
T 3paj_A 218 IRQAISTAKQLNPGK-PVEVETETLAELEEAISAGADIIMLDNFSLE----MMRE------AVKINAGRAALENSGNI-T 285 (320)
T ss_dssp HHHHHHHHHHHSTTS-CEEEEESSHHHHHHHHHTTCSEEEEESCCHH----HHHH------HHHHHTTSSEEEEESSC-C
T ss_pred HHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHcCCCEEEECCCCHH----HHHH------HHHHhCCCCeEEEECCC-C
Confidence 456677777778875 3334678889999999999999998863210 0110 01111 1122 68888 7
Q ss_pred HHHHHHHHHcCCCEEEEc
Q psy3862 224 GEMVEELILSGADVIKVG 241 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG 241 (671)
.+.++++.++|+|.+-||
T Consensus 286 ~~~I~~~a~tGVD~isvG 303 (320)
T 3paj_A 286 LDNLKECAETGVDYISVG 303 (320)
T ss_dssp HHHHHHHHTTTCSEEECT
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 899999999999999777
No 198
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=87.57 E-value=2.2 Score=44.79 Aligned_cols=68 Identities=15% Similarity=0.192 Sum_probs=35.7
Q ss_pred HHHcCCcEEEEccccccccccccccccccccccccccccccccC-ceeeccccCchhHHH-HHHcC-CcEEEECc
Q psy3862 398 AMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLG-GVVDGGCTSPGDVAK-AMGAG-ADFVMLGG 469 (671)
Q Consensus 398 l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~gG~v~t~~~a~-~l~aG-Ad~V~vG~ 469 (671)
+.++|+|+|.+-+.......... ......+.+..+|+... .++..|.+.+.+.+. +++.| ||.|++|.
T Consensus 238 l~~~Gvd~i~v~~~~~~~~~~~~----~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR 308 (338)
T 1z41_A 238 MKEQGVDLIDCSSGALVHADINV----FPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGR 308 (338)
T ss_dssp HHHTTCCEEEEECCCSSCCCCCC----CTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEECH
T ss_pred HHHcCCCEEEEecCccccCCCCC----CccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeecH
Confidence 35689999997522110000000 00011122333444332 255566666666665 68888 99999985
No 199
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=87.24 E-value=0.91 Score=46.21 Aligned_cols=114 Identities=15% Similarity=0.114 Sum_probs=61.9
Q ss_pred HHHHHHHHhCCCceEE-EeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEE
Q psy3862 120 AGLKEILAALPEIEYI-CLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTR 198 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~I-vld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~ 198 (671)
..++...++ +++.+ +.|...+....+.+.+ ++.......+..-..+.++++.+.+.+.+++-+.+-.|.. -
T Consensus 113 ~~~~~~~~a--Gadgii~~d~~~e~~~~~~~~~---~~~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~t---G 184 (268)
T 1qop_A 113 AFYARCEQV--GVDSVLVADVPVEESAPFRQAA---LRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVT---G 184 (268)
T ss_dssp HHHHHHHHH--TCCEEEETTCCGGGCHHHHHHH---HHTTCEEECEECTTCCHHHHHHHHHHCCSCEEEESSSSCC---C
T ss_pred HHHHHHHHc--CCCEEEEcCCCHHHHHHHHHHH---HHcCCcEEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcC---C
Confidence 345666677 77854 4444433333444443 3332111112212234678888777766666443422321 0
Q ss_pred ecccC-C-cchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 199 LKNKT-S-DFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 199 v~~~~-~-~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
....+ + ....+..++ .+| +.|||.|.++++.++.+|||++-||
T Consensus 185 ~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 185 AENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISG 234 (268)
T ss_dssp SSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 00001 1 112233332 356 7999999999999999999999999
No 200
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=87.21 E-value=2.2 Score=41.29 Aligned_cols=26 Identities=31% Similarity=0.523 Sum_probs=20.9
Q ss_pred eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 443 VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 443 ~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
+++|| +...++.+++++|||+|.||.
T Consensus 174 ~v~GG-I~~~~~~~~~~~Gad~vvvGs 199 (220)
T 2fli_A 174 EVDGG-VDNKTIRACYEAGANVFVAGS 199 (220)
T ss_dssp EEESS-CCTTTHHHHHHHTCCEEEESH
T ss_pred EEECc-CCHHHHHHHHHcCCCEEEECh
Confidence 45677 467788788899999999985
No 201
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=87.06 E-value=2.1 Score=43.08 Aligned_cols=47 Identities=17% Similarity=0.235 Sum_probs=32.9
Q ss_pred ccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchhh
Q psy3862 222 VTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISF 281 (671)
Q Consensus 222 ~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (671)
.|.+.++++.++|||.|-+|+ | .|+ ....+.+..+..++...+||-|
T Consensus 21 ~t~~~~~~l~~~GaD~IelG~---S-------~g~---t~~~~~~~v~~ir~~~~Pivl~ 67 (234)
T 2f6u_A 21 NTDEIIKAVADSGTDAVMISG---T-------QNV---TYEKARTLIEKVSQYGLPIVVE 67 (234)
T ss_dssp CCHHHHHHHHTTTCSEEEECC---C-------TTC---CHHHHHHHHHHHTTSCCCEEEC
T ss_pred ccHHHHHHHHHcCCCEEEECC---C-------CCC---CHHHHHHHHHHhcCCCCCEEEe
Confidence 356678899999999999998 2 222 1345666666666667888773
No 202
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=86.77 E-value=1 Score=46.52 Aligned_cols=26 Identities=27% Similarity=0.524 Sum_probs=18.6
Q ss_pred eeeccccCch-hHHHHHHcCCcEEEECc
Q psy3862 443 VVDGGCTSPG-DVAKAMGAGADFVMLGG 469 (671)
Q Consensus 443 ~i~gG~v~t~-~~a~~l~aGAd~V~vG~ 469 (671)
+..|| +.++ ++.+.+.+|||.|++|.
T Consensus 246 i~~GG-I~~~~da~~~l~~GAd~V~vg~ 272 (311)
T 1jub_A 246 IGTGG-IETGQDAFEHLLCGATMLQIGT 272 (311)
T ss_dssp EEESS-CCSHHHHHHHHHHTCSEEEECH
T ss_pred EEECC-CCCHHHHHHHHHcCCCEEEEch
Confidence 34555 5555 55557899999999985
No 203
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=86.66 E-value=1.2 Score=44.78 Aligned_cols=77 Identities=19% Similarity=0.296 Sum_probs=50.4
Q ss_pred HHHHHHHHHCCCcEEE-ECc--CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEcc
Q psy3862 171 GEMVEELILSGADVIK-VGI--GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVGI 242 (671)
Q Consensus 171 ~e~a~~Li~AGaD~Iv-Vdg--a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG~ 242 (671)
.+.|+...+.|+|-+. +|- +.. .+.+.+.++..+. .+| ++|||-+-+.++.++++|||-|-+|
T Consensus 34 ~~~a~~~~~~gad~lhvvDld~a~~--------~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~- 104 (243)
T 4gj1_A 34 LKKFKEYEKAGAKELHLVDLTGAKD--------PSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIG- 104 (243)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHHHC--------GGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEEC-
T ss_pred HHHHHHHHHCCCCEEEEEecCcccc--------cchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEc-
Confidence 3678888899999663 222 110 1112344444442 246 7999999999999999999988777
Q ss_pred cCCCccccceecccCcchhhhHHHHH
Q psy3862 243 GPGSVCTTRLKTGVGYPQFSAVLECA 268 (671)
Q Consensus 243 ~~~~~~~Tr~V~gv~~~~~~~~~~~~ 268 (671)
-..+-.|.+ +.|++
T Consensus 105 ----------t~a~~~p~l--i~e~~ 118 (243)
T 4gj1_A 105 ----------SMAIKDATL--CLEIL 118 (243)
T ss_dssp ----------TTTTTCHHH--HHHHH
T ss_pred ----------cccccCCch--HHHHH
Confidence 344556765 34444
No 204
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=86.63 E-value=0.12 Score=53.54 Aligned_cols=84 Identities=20% Similarity=0.167 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc----ccC--Cccc
Q psy3862 147 FVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS----CIP--QAGN 220 (671)
Q Consensus 147 ~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~----~~p--~aGn 220 (671)
+.+.++..|+.+|...++..-+.|.++++.++++|+|+|.+|--.- ..++ ..++.+. .+| +.||
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV~tleea~eA~~aGaD~I~LDn~~~----e~l~------~av~~l~~~~~~v~ieASGG 248 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEVENLEDALRAVEAGADIVMLDNLSP----EEVK------DISRRIKDINPNVIVEVSGG 248 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEESSHHHHHHHHHTTCSEEEEESCCH----HHHH------HHHHHHHHHCTTSEEEEEEC
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCCEEEECCCCH----HHHH------HHHHHhhccCCCceEEEECC
Confidence 4556666666677644455567789999999999999998875211 0011 0111111 233 6999
Q ss_pred cccHHHHHHHHHcCCCEEEEc
Q psy3862 221 VVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 221 V~t~~~a~~li~aGAdgvkVG 241 (671)
| |.+.+.++.++|+|++-||
T Consensus 249 I-t~eni~~~a~tGVD~IsvG 268 (285)
T 1o4u_A 249 I-TEENVSLYDFETVDVISSS 268 (285)
T ss_dssp C-CTTTGGGGCCTTCCEEEEG
T ss_pred C-CHHHHHHHHHcCCCEEEEe
Confidence 9 7889999999999999888
No 205
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=86.61 E-value=0.64 Score=46.36 Aligned_cols=114 Identities=22% Similarity=0.283 Sum_probs=61.8
Q ss_pred HHHHHHHHhCCCceE--EEeeccC---CCChHHHHHHHHHHHhCCC-ceE-EEEE-eccH----HHHHHHHHCCCcEEEE
Q psy3862 120 AGLKEILAALPEIEY--ICLDVAN---GYTQTFVDFVRRIREMYPK-HVI-IAGN-VVTG----EMVEELILSGADVIKV 187 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~--Ivld~a~---G~~~~~~~~ik~lr~~~P~-~~l-i~g~-v~t~----e~a~~Li~AGaD~IvV 187 (671)
..+++.+.. +++. ++++... ++...+.+-++.+++..+. ..+ |.-. ..+. ..++...++|||+|+.
T Consensus 75 ~e~~~Ai~~--GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKT 152 (220)
T 1ub3_A 75 LEAALACAR--GADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKT 152 (220)
T ss_dssp HHHHHHHHT--TCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHc--CCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEe
Confidence 345566666 5554 3444331 3334455555555554322 222 2211 1233 4566778899999998
Q ss_pred CcCCCc-eEEEEecccCCcchhhh-hcc-ccC--CccccccHHHHHHHHHcCCCEEEEccc
Q psy3862 188 GIGPGS-VCTTRLKNKTSDFFLIQ-FYS-CIP--QAGNVVTGEMVEELILSGADVIKVGIG 243 (671)
Q Consensus 188 dga~G~-~~~t~v~~~~~~~~~i~-~i~-~~p--~aGnV~t~~~a~~li~aGAdgvkVG~~ 243 (671)
..+-+. ..+- .++.+.. .+. .+| ++||+-|.+++.+++++||+ |+|..
T Consensus 153 sTGf~~~gat~------~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~--RiG~S 205 (220)
T 1ub3_A 153 STGFGPRGASL------EDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGAS--RLGTS 205 (220)
T ss_dssp CCSSSSCCCCH------HHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCS--EEEET
T ss_pred CCCCCCCCCCH------HHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCc--ccchh
Confidence 763221 0000 0111100 011 234 79999999999999999999 77743
No 206
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=86.61 E-value=0.77 Score=46.17 Aligned_cols=110 Identities=17% Similarity=0.241 Sum_probs=60.7
Q ss_pred HHHHHHHhCCCceEEEeeccC---CCChHHHHHHHHHHHhCCCce-E-EE--EEe---ccH----HHHHHHHHCCCcEEE
Q psy3862 121 GLKEILAALPEIEYICLDVAN---GYTQTFVDFVRRIREMYPKHV-I-IA--GNV---VTG----EMVEELILSGADVIK 186 (671)
Q Consensus 121 rl~~l~~a~~~~d~Ivld~a~---G~~~~~~~~ik~lr~~~P~~~-l-i~--g~v---~t~----e~a~~Li~AGaD~Iv 186 (671)
.+++.+....++--+++|... |....+.+-++.+++..+... + |- +-. .|. ...+...++|+|+|+
T Consensus 85 E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVK 164 (231)
T 3ndo_A 85 EAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVK 164 (231)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEE
Confidence 455666663232234555432 444555556666665543221 1 11 111 133 334566789999999
Q ss_pred ECcCC---CceEEEEecccCCcchhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEEcc
Q psy3862 187 VGIGP---GSVCTTRLKNKTSDFFLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKVGI 242 (671)
Q Consensus 187 Vdga~---G~~~~t~v~~~~~~~~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG~ 242 (671)
...+= |.. ++.-+..+. .++ ++|||-|.+++++++++||+ |+|.
T Consensus 165 TSTGf~~~~gA----------t~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~--RiGt 218 (231)
T 3ndo_A 165 TSTGFHPSGGA----------SVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGAT--RLGL 218 (231)
T ss_dssp CCCSCCTTCSC----------CHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTCS--EEEE
T ss_pred cCCCCCCCCCC----------CHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcch--hccc
Confidence 87632 211 111111111 133 79999999999999999999 5563
No 207
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=86.37 E-value=1.2 Score=46.55 Aligned_cols=83 Identities=23% Similarity=0.245 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc-ccC--Ccccccc
Q psy3862 147 FVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS-CIP--QAGNVVT 223 (671)
Q Consensus 147 ~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~-~~p--~aGnV~t 223 (671)
+.+.+++.|+..|.. ++---+.|.+.++.++++|+|+|-+|--.-. .+++ .++++. .+. +.||| |
T Consensus 194 i~~Av~~ar~~~p~~-kIeVEv~tl~e~~eAl~aGaDiImLDn~s~~----~l~~------av~~~~~~v~leaSGGI-t 261 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNE-YIAIECDNISQVEESLSNNVDMILLDNMSIS----EIKK------AVDIVNGKSVLEVSGCV-N 261 (300)
T ss_dssp HHHHHHHHHHHSSSC-CEEEEESSHHHHHHHHHTTCSEEEEESCCHH----HHHH------HHHHHTTSSEEEEESSC-C
T ss_pred HHHHHHHHHHhCCCC-CEEEEECCHHHHHHHHHcCCCEEEECCCCHH----HHHH------HHHhhcCceEEEEECCC-C
Confidence 456677777666754 3444667889999999999999988641100 0100 011111 112 68998 8
Q ss_pred HHHHHHHHHcCCCEEEEc
Q psy3862 224 GEMVEELILSGADVIKVG 241 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG 241 (671)
.+.++++.++|+|.+-+|
T Consensus 262 ~~~i~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 262 IRNVRNIALTGVDYISIG 279 (300)
T ss_dssp TTTHHHHHTTTCSEEECG
T ss_pred HHHHHHHHHcCCCEEEeC
Confidence 889999999999999888
No 208
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=85.89 E-value=0.48 Score=49.09 Aligned_cols=25 Identities=36% Similarity=0.437 Sum_probs=18.2
Q ss_pred eeccccCch-hHHHHHHcCCcEEEECc
Q psy3862 444 VDGGCTSPG-DVAKAMGAGADFVMLGG 469 (671)
Q Consensus 444 i~gG~v~t~-~~a~~l~aGAd~V~vG~ 469 (671)
..|| +.++ ++.+.+.+|||.|++|.
T Consensus 249 ~~GG-I~~~~da~~~l~~GAd~V~ig~ 274 (314)
T 2e6f_A 249 GCGG-VYSGEDAFLHILAGASMVQVGT 274 (314)
T ss_dssp EESS-CCSHHHHHHHHHHTCSSEEECH
T ss_pred EECC-CCCHHHHHHHHHcCCCEEEEch
Confidence 3555 5555 55557899999999985
No 209
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=85.89 E-value=0.81 Score=46.09 Aligned_cols=62 Identities=23% Similarity=0.266 Sum_probs=40.4
Q ss_pred HHHHHHHHCCCcEEEECcCCC--ceEEEEecccCCcchh---hhhccccC--CccccccHHHHHHHHHcCCCEEEEcc
Q psy3862 172 EMVEELILSGADVIKVGIGPG--SVCTTRLKNKTSDFFL---IQFYSCIP--QAGNVVTGEMVEELILSGADVIKVGI 242 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G--~~~~t~v~~~~~~~~~---i~~i~~~p--~aGnV~t~~~a~~li~aGAdgvkVG~ 242 (671)
..++...++|||+|+...+-+ ...+ ..+..+ .+.+. +| ++||+-|.+.+.+++++||+ |+|.
T Consensus 152 ~a~ria~eaGADfVKTsTG~~~~~gAt------~~dv~l~~m~~~v~-v~VKaaGGirt~~~al~~i~aGa~--RiG~ 220 (234)
T 1n7k_A 152 LLVDSSRRAGADIVKTSTGVYTKGGDP------VTVFRLASLAKPLG-MGVKASGGIRSGIDAVLAVGAGAD--IIGT 220 (234)
T ss_dssp HHHHHHHHTTCSEEESCCSSSCCCCSH------HHHHHHHHHHGGGT-CEEEEESSCCSHHHHHHHHHTTCS--EEEE
T ss_pred HHHHHHHHhCCCEEEeCCCCCCCCCCC------HHHHHHHHHHHHHC-CCEEEecCCCCHHHHHHHHHcCcc--ccch
Confidence 356677889999999875321 1100 001111 11122 45 79999999999999999999 7774
No 210
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=85.84 E-value=0.29 Score=51.03 Aligned_cols=83 Identities=13% Similarity=0.131 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc-ccC--Ccccccc
Q psy3862 147 FVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS-CIP--QAGNVVT 223 (671)
Q Consensus 147 ~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~-~~p--~aGnV~t 223 (671)
+.+.++..++..|.. ++---+.|.+.++.++++|+|+|.+|...-. .+++ .+..+. .++ +.||| |
T Consensus 196 i~~Av~~~r~~~p~~-~ieVEvdtlde~~eAl~aGaD~I~LDn~~~~----~l~~------av~~i~~~v~ieaSGGI-~ 263 (298)
T 3gnn_A 196 VGEALDAAFALNAEV-PVQIEVETLDQLRTALAHGARSVLLDNFTLD----MMRD------AVRVTEGRAVLEVSGGV-N 263 (298)
T ss_dssp HHHHHHHHHHHC--C-CCEEEESSHHHHHHHHHTTCEEEEEESCCHH----HHHH------HHHHHTTSEEEEEESSC-S
T ss_pred HHHHHHHHHHhCCCC-CEEEEeCCHHHHHHHHHcCCCEEEECCCCHH----HHHH------HHHHhCCCCeEEEEcCC-C
Confidence 456677777777753 3333467889999999999999988752210 0110 011111 112 78998 8
Q ss_pred HHHHHHHHHcCCCEEEEc
Q psy3862 224 GEMVEELILSGADVIKVG 241 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG 241 (671)
.+.+.++.++|+|.+-||
T Consensus 264 ~~~i~~~a~tGVD~isvG 281 (298)
T 3gnn_A 264 FDTVRAIAETGVDRISIG 281 (298)
T ss_dssp TTTHHHHHHTTCSEEECG
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 888999999999999888
No 211
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=85.75 E-value=0.34 Score=50.23 Aligned_cols=83 Identities=17% Similarity=0.190 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc----ccC--Cccc
Q psy3862 147 FVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS----CIP--QAGN 220 (671)
Q Consensus 147 ~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~----~~p--~aGn 220 (671)
..+.++..|+.+|.. ++..-+.+.++++.++++|+|+|.+|--.-. .++ ..++.+. .++ ++||
T Consensus 181 i~~av~~ar~~~~~~-~I~Vev~t~eea~eal~aGaD~I~LDn~~~~----~~~------~~v~~l~~~~~~v~ieaSGG 249 (284)
T 1qpo_A 181 VVDALRAVRNAAPDL-PCEVEVDSLEQLDAVLPEKPELILLDNFAVW----QTQ------TAVQRRDSRAPTVMLESSGG 249 (284)
T ss_dssp HHHHHHHHHHHCTTS-CEEEEESSHHHHHHHGGGCCSEEEEETCCHH----HHH------HHHHHHHHHCTTCEEEEESS
T ss_pred HHHHHHHHHHhCCCC-CEEEEeCCHHHHHHHHHcCCCEEEECCCCHH----HHH------HHHHHhhccCCCeEEEEECC
Confidence 345677777777765 5555777899999999999999988752110 011 0111111 123 6999
Q ss_pred cccHHHHHHHHHcCCCEEEEc
Q psy3862 221 VVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 221 V~t~~~a~~li~aGAdgvkVG 241 (671)
| |.+.++++.++|+|.+-||
T Consensus 250 I-t~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 250 L-SLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp C-CTTTHHHHHHTTCSEEECG
T ss_pred C-CHHHHHHHHhcCCCEEEEC
Confidence 9 8899999999999999877
No 212
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=85.42 E-value=0.86 Score=47.24 Aligned_cols=75 Identities=21% Similarity=0.255 Sum_probs=48.1
Q ss_pred EeccHHHHHHHHHCCCcEEEECcCCCceEE----EE-------------e-cc--------cCCcchhhhhcc---ccC-
Q psy3862 167 NVVTGEMVEELILSGADVIKVGIGPGSVCT----TR-------------L-KN--------KTSDFFLIQFYS---CIP- 216 (671)
Q Consensus 167 ~v~t~e~a~~Li~AGaD~IvVdga~G~~~~----t~-------------v-~~--------~~~~~~~i~~i~---~~p- 216 (671)
.+.+.+.+...+++|+|+|.+.|-.|.+.+ .. + .+ ...++.++..+. .+|
T Consensus 131 ~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPv 210 (305)
T 2nv1_A 131 GCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPV 210 (305)
T ss_dssp EESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSS
T ss_pred EeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhcCCCE
Confidence 345666666667999999999763341100 00 0 00 112333333332 245
Q ss_pred ---CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 217 ---QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 217 ---~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+.|||.|.+.+..++++|||||-||
T Consensus 211 i~~a~GGI~~~~d~~~~~~~GadgV~vG 238 (305)
T 2nv1_A 211 VNFAAGGVATPADAALMMQLGADGVFVG 238 (305)
T ss_dssp CEEBCSCCCSHHHHHHHHHTTCSCEEEC
T ss_pred EEEeccCCCCHHHHHHHHHcCCCEEEEc
Confidence 4799999999999999999999999
No 213
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=84.99 E-value=0.88 Score=46.34 Aligned_cols=111 Identities=24% Similarity=0.123 Sum_probs=56.2
Q ss_pred HHHHHHHcCCeEEEc----c-----CCCHHHHHHHHhcC-cccccceeeecccChhhHHHHHHcCCcEEEEccccccccc
Q psy3862 348 MAKHLAKHGLFTTIH----K-----YYTLEEWKAFAVQN-PDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQ 417 (671)
Q Consensus 348 mA~~la~~Gglgvih----r-----~~~~e~~~~~v~~~-~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~ 417 (671)
++..+.+.|+-+++. - ..+.+++.+.+++. ++-+. +.....-+.++..++.++|+|+|+.-+...|-..
T Consensus 84 f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~-vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~~ 162 (264)
T 1xm3_A 84 IARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFI-VLPYTSDDVVLARKLEELGVHAIMPGASPIGSGQ 162 (264)
T ss_dssp HHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCC-EEEEECSCHHHHHHHHHHTCSCBEECSSSTTCCC
T ss_pred HHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeE-EEEEcCCCHHHHHHHHHhCCCEEEECCcccCCCC
Confidence 455555666666632 2 23455666665542 00011 1111112346677778899999965222122111
Q ss_pred --cccccccccccccccccccccccC--ceeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 418 --SGGELTNIEYMFFPLVGDMNSYLG--GVVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 418 --~~~~~~~~~~~~~~~~~~~~~~~~--~~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
...+ .+..+++... -++.||+-...++.+++.+|||+|.||.
T Consensus 163 ~~~~~~----------~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 163 GILNPL----------NLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp CCSCHH----------HHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CCCCHH----------HHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcH
Confidence 1111 2333343322 1445674345566667999999999995
No 214
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=84.99 E-value=1.6 Score=44.66 Aligned_cols=112 Identities=14% Similarity=0.086 Sum_probs=60.8
Q ss_pred HHHHHHHHhCCCce-EEEeeccCCCChHHHHHHHHHHHhC-CCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCce-EE
Q psy3862 120 AGLKEILAALPEIE-YICLDVANGYTQTFVDFVRRIREMY-PKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSV-CT 196 (671)
Q Consensus 120 ~rl~~l~~a~~~~d-~Ivld~a~G~~~~~~~~ik~lr~~~-P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~-~~ 196 (671)
..++.+.++ +++ +++.|...+....+.+.+ ++.. +... +++-..+.++++.+.+.+..++-+.+..|.. ..
T Consensus 110 ~f~~~~~~a--G~dGviv~Dl~~ee~~~~~~~~---~~~gl~~i~-liap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~ 183 (271)
T 1ujp_A 110 RFFGLFKQA--GATGVILPDLPPDEDPGLVRLA---QEIGLETVF-LLAPTSTDARIATVVRHATGFVYAVSVTGVTGMR 183 (271)
T ss_dssp HHHHHHHHH--TCCEEECTTCCGGGCHHHHHHH---HHHTCEEEC-EECTTCCHHHHHHHHTTCCSCEEEECC-------
T ss_pred HHHHHHHHc--CCCEEEecCCCHHHHHHHHHHH---HHcCCceEE-EeCCCCCHHHHHHHHHhCCCCEEEEecCcccCCC
Confidence 345667777 778 455554433334444444 3332 2112 2222245788888888777766554433321 11
Q ss_pred EEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 197 TRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 197 t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+.... +...++..++ .+| ++|||-|.++++.+ +|||||-||
T Consensus 184 ~~~~~--~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVG 229 (271)
T 1ujp_A 184 ERLPE--EVKDLVRRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVG 229 (271)
T ss_dssp -------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEEC
T ss_pred CCCCc--cHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEEC
Confidence 11110 1112333332 356 79999999999996 999999999
No 215
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=84.57 E-value=3.7 Score=49.57 Aligned_cols=27 Identities=19% Similarity=0.298 Sum_probs=20.0
Q ss_pred eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 443 VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 443 ~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
+..||+....++.++|.+|||.|+||.
T Consensus 791 i~~GGI~s~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 791 LATGGIDSAESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEESH
T ss_pred EEecCcCCHHHHHHHHHcCCCEEEEee
Confidence 346776555555668899999999985
No 216
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=84.57 E-value=4.3 Score=43.24 Aligned_cols=108 Identities=19% Similarity=0.194 Sum_probs=64.8
Q ss_pred HHHhCCCceEEEeeccCCCC------------------------hHHHHHHHHHHHhCC---CceEEEEE--ec------
Q psy3862 125 ILAALPEIEYICLDVANGYT------------------------QTFVDFVRRIREMYP---KHVIIAGN--VV------ 169 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~~------------------------~~~~~~ik~lr~~~P---~~~li~g~--v~------ 169 (671)
..++ +.|.|-++.+||+. +-..+.++.+|+..+ ...++... ..
T Consensus 170 a~~a--GfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~ 247 (364)
T 1vyr_A 170 AREA--GFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGP 247 (364)
T ss_dssp HHHT--TCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCT
T ss_pred HHHc--CCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCC
Confidence 4555 78889888887651 124455677776542 22333322 11
Q ss_pred -cH----HHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEE
Q psy3862 170 -TG----EMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVI 238 (671)
Q Consensus 170 -t~----e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-Adgv 238 (671)
+. +.++.|.++|+|+|.+-...-.. .... ....+..++ .+| ..|++ |.+.+..+++.| ||+|
T Consensus 248 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~-----~~~~-~~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V 320 (364)
T 1vyr_A 248 NEEADALYLIEELAKRGIAYLHMSETDLAG-----GKPY-SEAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKGLIDAV 320 (364)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCBTTB-----CCCC-CHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCcccC-----CCcc-cHHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCCCccEE
Confidence 22 34889999999999874321000 0000 122222232 246 68889 999999999998 9999
Q ss_pred EEc
Q psy3862 239 KVG 241 (671)
Q Consensus 239 kVG 241 (671)
-+|
T Consensus 321 ~~g 323 (364)
T 1vyr_A 321 AFG 323 (364)
T ss_dssp EES
T ss_pred EEC
Confidence 777
No 217
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=84.51 E-value=1.8 Score=43.54 Aligned_cols=27 Identities=11% Similarity=0.054 Sum_probs=24.3
Q ss_pred ceeeecccChhhHHHHHH--cCCcEEEEc
Q psy3862 383 HVADGGCTSPGDVAKAMG--AGADFVMLG 409 (671)
Q Consensus 383 ~v~~~~~~~~~~~~~l~~--aG~d~i~id 409 (671)
.+.+.||++++.+..+++ +|+|.+++.
T Consensus 189 ~I~vdGGI~~~~~~~~~~~~aGad~~VvG 217 (237)
T 3cu2_A 189 LINIDGSMTLELAKYFKQGTHQIDWLVSG 217 (237)
T ss_dssp EEEEESSCCHHHHHHHHHSSSCCCCEEEC
T ss_pred eEEEECCcCHHHHHHHHHhCCCCcEEEEe
Confidence 377789999999999999 999999987
No 218
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=84.10 E-value=4.1 Score=41.02 Aligned_cols=72 Identities=19% Similarity=0.239 Sum_probs=42.5
Q ss_pred ChhhHHHHHHcCCcEEEEccccccccc-----cccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEE
Q psy3862 391 SPGDVAKAMGAGADFVMLGGMFAGHDQ-----SGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFV 465 (671)
Q Consensus 391 ~~~~~~~l~~aG~d~i~id~~a~gh~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V 465 (671)
+.+++.+..+.|+|+|.+..+....++ ..++.++.+....| .-++-+.+||+ ...++..++.+|||+|
T Consensus 144 t~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~------~~iPvvAiGGI-~~~ni~~~~~aGa~gv 216 (243)
T 3o63_A 144 DPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGG------DDKPWFAIGGI-NAQRLPAVLDAGARRI 216 (243)
T ss_dssp SHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---------CCCEEEESSC-CTTTHHHHHHTTCCCE
T ss_pred CHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhcc------CCCCEEEecCC-CHHHHHHHHHcCCCEE
Confidence 457777777899999999643322221 11222222211100 01222557885 7777888899999999
Q ss_pred EECc
Q psy3862 466 MLGG 469 (671)
Q Consensus 466 ~vG~ 469 (671)
-||.
T Consensus 217 av~s 220 (243)
T 3o63_A 217 VVVR 220 (243)
T ss_dssp EESH
T ss_pred EEeH
Confidence 9984
No 219
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=84.09 E-value=4.7 Score=40.77 Aligned_cols=124 Identities=22% Similarity=0.221 Sum_probs=70.3
Q ss_pred CceEEecCCCcc------ccHHHHHHHHHcCCeEEeecCCCHHHHHHhhhcCcc-cccceE-EecCCChhhHHHHHHHHH
Q psy3862 56 GVPIIAANMDTV------GTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPD-VIKHVA-VSSGISAKDLAGLKEILA 127 (671)
Q Consensus 56 ~~Piv~a~M~~v------t~~~lA~Ala~~gglgvIh~n~~~Eeq~~~i~~~p~-~~~~~~-v~~G~~~~d~~rl~~l~~ 127 (671)
++|++. |++. +..+.+...+..|.=|++=..+++|+...+...... -...+. +++. ...+|+.++..
T Consensus 94 ~~Pi~~--m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~---t~~~rl~~ia~ 168 (262)
T 2ekc_A 94 DIPFLL--MTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPT---STRKRIKLICE 168 (262)
T ss_dssp TSCEEE--ECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTT---CCHHHHHHHHH
T ss_pred CCCEEE--EecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCC---CCHHHHHHHHH
Confidence 678877 5432 225667767777766886667778776555421110 011111 1221 23457777766
Q ss_pred hCCCceEEEeeccCC-------CC-hHHHHHHHHHHHhCCCceEEEE-EeccHHHHHHHHHCCCcEEEEC
Q psy3862 128 ALPEIEYICLDVANG-------YT-QTFVDFVRRIREMYPKHVIIAG-NVVTGEMVEELILSGADVIKVG 188 (671)
Q Consensus 128 a~~~~d~Ivld~a~G-------~~-~~~~~~ik~lr~~~P~~~li~g-~v~t~e~a~~Li~AGaD~IvVd 188 (671)
...+ ++......| .+ ....+.++++|+.. ...+.+| .+.+++.++. +.+|||.++|.
T Consensus 169 ~a~g--fiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~vG~GI~t~e~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 169 AADE--MTYFVSVTGTTGAREKLPYERIKKKVEEYRELC-DKPVVVGFGVSKKEHARE-IGSFADGVVVG 234 (262)
T ss_dssp HCSS--CEEEESSCC---------CHHHHHHHHHHHHHC-CSCEEEESSCCSHHHHHH-HHTTSSEEEEC
T ss_pred hCCC--CEEEEecCCccCCCCCcCcccHHHHHHHHHhhc-CCCEEEeCCCCCHHHHHH-HHcCCCEEEEC
Confidence 6333 332222222 12 34557788887754 3334444 5678999998 78899999984
No 220
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=83.99 E-value=3.7 Score=41.69 Aligned_cols=107 Identities=11% Similarity=0.052 Sum_probs=64.8
Q ss_pred HHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHC-CCcEEEECcCCCceEEEEec
Q psy3862 122 LKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILS-GADVIKVGIGPGSVCTTRLK 200 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~A-GaD~IvVdga~G~~~~t~v~ 200 (671)
+.+...+ |+|++.++.+-=....+.++++..++ . +..+..-+.+.+.++++.++ |+|+|-+--.+ +.
T Consensus 116 i~ea~~~--GAD~ilLi~a~l~~~~l~~l~~~a~~-l--Gl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~-------l~ 183 (251)
T 1i4n_A 116 VKLASSV--GADAILIIARILTAEQIKEIYEAAEE-L--GMDSLVEVHSREDLEKVFSVIRPKIIGINTRD-------LD 183 (251)
T ss_dssp HHHHHHT--TCSEEEEEGGGSCHHHHHHHHHHHHT-T--TCEEEEEECSHHHHHHHHTTCCCSEEEEECBC-------TT
T ss_pred HHHHHHc--CCCEEEEecccCCHHHHHHHHHHHHH-c--CCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcc-------cc
Confidence 4445555 88998888662111334444444333 2 23333356788999999999 99999442211 11
Q ss_pred ccCCcc----hhhhhcc-ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 201 NKTSDF----FLIQFYS-CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 201 ~~~~~~----~~i~~i~-~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
...+++ .+++.+. ..+ ..|||-|.+.++.+.++ ||||-||
T Consensus 184 t~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG 230 (251)
T 1i4n_A 184 TFEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVG 230 (251)
T ss_dssp TCCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEEC
T ss_pred cCCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEc
Confidence 111121 2222221 112 59999999999999999 9999999
No 221
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=83.87 E-value=3.5 Score=43.92 Aligned_cols=108 Identities=20% Similarity=0.125 Sum_probs=64.4
Q ss_pred HHHhCCCceEEEeeccCCCC------------------------hHHHHHHHHHHHhC---CCceEEEEEe--------c
Q psy3862 125 ILAALPEIEYICLDVANGYT------------------------QTFVDFVRRIREMY---PKHVIIAGNV--------V 169 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~~------------------------~~~~~~ik~lr~~~---P~~~li~g~v--------~ 169 (671)
..++ +.|.|-++.+||+. +-..+.++.+|+.. |...++.... .
T Consensus 170 a~~a--GfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~ 247 (365)
T 2gou_A 170 AMEA--GFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDAD 247 (365)
T ss_dssp HHHT--TCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSS
T ss_pred HHHc--CCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCC
Confidence 3455 78889888877642 12345566666543 3333343311 1
Q ss_pred c----HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEE
Q psy3862 170 T----GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIK 239 (671)
Q Consensus 170 t----~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-Adgvk 239 (671)
+ .+.++.|.++|+|+|.+-...-.. ...+ ....+..++ .+| ..|+| |.+.+..+++.| ||+|-
T Consensus 248 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~-----~~~~-~~~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 248 PILTYTAAAALLNKHRIVYLHIAEVDWDD-----APDT-PVSFKRALREAYQGVLIYAGRY-NAEKAEQAINDGLADMIG 320 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTB-----CCCC-CHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCcCC-----CCCc-cHHHHHHHHHHCCCcEEEeCCC-CHHHHHHHHHCCCcceeh
Confidence 2 244888999999999874321000 0001 112222232 246 68999 999999999999 99997
Q ss_pred Ec
Q psy3862 240 VG 241 (671)
Q Consensus 240 VG 241 (671)
+|
T Consensus 321 ig 322 (365)
T 2gou_A 321 FG 322 (365)
T ss_dssp CC
T ss_pred hc
Confidence 77
No 222
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=83.74 E-value=1.1 Score=46.94 Aligned_cols=27 Identities=26% Similarity=0.290 Sum_probs=18.9
Q ss_pred eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 443 VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 443 ~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
+..||+....++.+++.+|||.|++|.
T Consensus 293 i~~GGI~~~~da~~~l~~GAd~V~igr 319 (336)
T 1f76_A 293 IGVGGIDSVIAAREKIAAGASLVQIYS 319 (336)
T ss_dssp EEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred EEECCCCCHHHHHHHHHCCCCEEEeeH
Confidence 345665444444557899999999985
No 223
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=83.72 E-value=1.7 Score=43.81 Aligned_cols=167 Identities=14% Similarity=0.087 Sum_probs=82.2
Q ss_pred cCceEEecCCCcccc-HHHHHHHHHcCCeEEeecCCCHHHHHHhhhcCcccccceEE--ecCCC----hhh---HHHHHH
Q psy3862 55 QGVPIIAANMDTVGT-FEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAV--SSGIS----AKD---LAGLKE 124 (671)
Q Consensus 55 l~~Piv~a~M~~vt~-~~lA~Ala~~gglgvIh~n~~~Eeq~~~i~~~p~~~~~~~v--~~G~~----~~d---~~rl~~ 124 (671)
+..|+..++|.+..+ .+++.+..+.|.-+++= .+ .+.+...+.-....++.+ ..+.+ +.+ .+.+++
T Consensus 32 id~~~~l~p~~~~~~~~~~~~~~~~~g~~~i~~---~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~ 107 (273)
T 2qjg_A 32 MDHGVSNGPIKGLIDIRKTVNDVAEGGANAVLL---HK-GIVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIVTTVEE 107 (273)
T ss_dssp CCHHHHHCSCTTSSSHHHHHHHHHHHTCSEEEE---CH-HHHHSCCCSSSCCCEEEEECEECCTTSSSTTCCEECSCHHH
T ss_pred cccccccCCCcchhhHHHHHHHHHhcCCCEEEe---CH-HHHHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHHHHHHH
Confidence 345665677877665 46777666666555531 11 122222111000112222 12221 111 345566
Q ss_pred HHHhCCCceEE--EeeccCCCChHHHHHHHHHHH---hCCCceEEEEEe---------ccH---HHH-HHHHHCCCcEEE
Q psy3862 125 ILAALPEIEYI--CLDVANGYTQTFVDFVRRIRE---MYPKHVIIAGNV---------VTG---EMV-EELILSGADVIK 186 (671)
Q Consensus 125 l~~a~~~~d~I--vld~a~G~~~~~~~~ik~lr~---~~P~~~li~g~v---------~t~---e~a-~~Li~AGaD~Iv 186 (671)
.+.. +++.+ .+...........+.++++.+ .+.. .++.... .+. +.+ +.+.++|+|+|.
T Consensus 108 a~~~--Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~-~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~ 184 (273)
T 2qjg_A 108 AIRM--GADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGM-PLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVK 184 (273)
T ss_dssp HHHT--TCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTC-CEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHc--CCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCC-CEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEE
Confidence 6676 77777 443332222333344444422 2322 1222120 122 333 788899999998
Q ss_pred ECcCCCceEEEEecccCCcchhhhhcc---ccC--Ccccccc--HHH----HHHHHHcCCCEEEEc
Q psy3862 187 VGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVT--GEM----VEELILSGADVIKVG 241 (671)
Q Consensus 187 Vdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t--~~~----a~~li~aGAdgvkVG 241 (671)
+.-.. ++..+..+. .+| +.|||.+ .+. +..++++||+|+-||
T Consensus 185 ~~~~~-------------~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg 237 (273)
T 2qjg_A 185 TSYTG-------------DIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVG 237 (273)
T ss_dssp ECCCS-------------SHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECC
T ss_pred ECCCC-------------CHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEee
Confidence 75211 122222221 245 6999995 666 667778999999876
No 224
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=83.66 E-value=4.2 Score=40.23 Aligned_cols=112 Identities=18% Similarity=0.095 Sum_probs=58.2
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEecc-HHHHHHHHHCCCc-EEE-ECcCCCceEE
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVT-GEMVEELILSGAD-VIK-VGIGPGSVCT 196 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t-~e~a~~Li~AGaD-~Iv-Vdga~G~~~~ 196 (671)
+.++.+.++ +++.+++.... ..+..+.++.+++... -..++-+..| .+.++.+.+ ++| +|- +.. .|..-.
T Consensus 99 ~~~~~~~~~--Gad~v~~~~~~--~~~~~~~~~~~~~~g~-~~~~~i~~~t~~e~~~~~~~-~~d~~i~~~~~-~G~~g~ 171 (248)
T 1geq_A 99 NFLAEAKAS--GVDGILVVDLP--VFHAKEFTEIAREEGI-KTVFLAAPNTPDERLKVIDD-MTTGFVYLVSL-YGTTGA 171 (248)
T ss_dssp HHHHHHHHH--TCCEEEETTCC--GGGHHHHHHHHHHHTC-EEEEEECTTCCHHHHHHHHH-HCSSEEEEECC-C-----
T ss_pred HHHHHHHHC--CCCEEEECCCC--hhhHHHHHHHHHHhCC-CeEEEECCCCHHHHHHHHHh-cCCCeEEEEEC-CccCCC
Confidence 456667777 78888775332 1233333333333322 2223323334 455555544 467 552 222 331100
Q ss_pred EEecccC-C-cchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 197 TRLKNKT-S-DFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 197 t~v~~~~-~-~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+ ..+ + .+..+..+. .+| +.|||.+.+.+..++++|||++-||
T Consensus 172 ~---~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 172 R---EEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVG 220 (248)
T ss_dssp -----CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred C---CCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEc
Confidence 0 001 1 112222221 356 7999999999999999999999998
No 225
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=83.62 E-value=6.5 Score=41.79 Aligned_cols=61 Identities=16% Similarity=0.263 Sum_probs=33.8
Q ss_pred HHHcCCcEEEEcccc-ccccccccccccccccccccccccccccC-ceeeccccCchhHHH-HHHcC-CcEEEECc
Q psy3862 398 AMGAGADFVMLGGMF-AGHDQSGGELTNIEYMFFPLVGDMNSYLG-GVVDGGCTSPGDVAK-AMGAG-ADFVMLGG 469 (671)
Q Consensus 398 l~~aG~d~i~id~~a-~gh~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~gG~v~t~~~a~-~l~aG-Ad~V~vG~ 469 (671)
|.++|+|+|.+-+.. .+..... .+++..+|+.+. .++..|.+ +.+.++ +++.| ||.|++|.
T Consensus 260 l~~~G~d~i~v~~~~~~~~~~~~----------~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR 324 (364)
T 1vyr_A 260 LAKRGIAYLHMSETDLAGGKPYS----------EAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGR 324 (364)
T ss_dssp HHHTTCSEEEEECCBTTBCCCCC----------HHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEESH
T ss_pred HHHhCCCEEEEecCcccCCCccc----------HHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCCCccEEEECH
Confidence 356899999985311 1100001 122333444443 25555555 666655 67887 99999985
No 226
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=83.53 E-value=0.96 Score=46.73 Aligned_cols=93 Identities=15% Similarity=0.187 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcC---CCceEE-EEecccC-Cc--chhhhhcccc-C-
Q psy3862 146 TFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIG---PGSVCT-TRLKNKT-SD--FFLIQFYSCI-P- 216 (671)
Q Consensus 146 ~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga---~G~~~~-t~v~~~~-~~--~~~i~~i~~~-p- 216 (671)
...++++.-++. ...-..-+.+.++++++.++|+|+|++.-. +|.+=+ +.+.... +. -...+.+..+ |
T Consensus 151 ~eve~I~~A~~~---gL~Ti~~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpd 227 (286)
T 2p10_A 151 QEVEMIAEAHKL---DLLTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDD 227 (286)
T ss_dssp HHHHHHHHHHHT---TCEECCEECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHC---CCeEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCC
Confidence 345555554443 123334567899999999999999998653 222211 1111000 00 0011111111 2
Q ss_pred -----CccccccHHHHHHHHHc--CCCEEEEc
Q psy3862 217 -----QAGNVVTGEMVEELILS--GADVIKVG 241 (671)
Q Consensus 217 -----~aGnV~t~~~a~~li~a--GAdgvkVG 241 (671)
.+|+|.|++.++.+++. |++|+..+
T Consensus 228 vivLc~gGpIstpeDv~~~l~~t~G~~G~~gA 259 (286)
T 2p10_A 228 IIILSHGGPIANPEDARFILDSCQGCHGFYGA 259 (286)
T ss_dssp CEEEEESTTCCSHHHHHHHHHHCTTCCEEEES
T ss_pred cEEEecCCCCCCHHHHHHHHhcCCCccEEEee
Confidence 48899999999999999 99999665
No 227
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=83.52 E-value=1.6 Score=45.98 Aligned_cols=51 Identities=20% Similarity=0.042 Sum_probs=29.9
Q ss_pred HHHHHHHHcCCCEEEEcccCCCccccceecccCcc-hhhhHHHHHHHhhhcCC
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYP-QFSAVLECADAAHGLGG 276 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~-~~~~~~~~~~~~~~~~~ 276 (671)
+++..++++|+|.|++-+...-.- .+...+..+- .+..+.++.++|+++|.
T Consensus 100 ~~i~~a~~~g~~~v~i~~~~s~~~-~~~~~~~s~~e~l~~~~~~v~~ak~~G~ 151 (337)
T 3ble_A 100 KTVDWIKDSGAKVLNLLTKGSLHH-LEKQLGKTPKEFFTDVSFVIEYAIKSGL 151 (337)
T ss_dssp HHHHHHHHHTCCEEEEEEECSHHH-HHHHTCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHCCCCEEEEEEecCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHCCC
Confidence 489999999999999864322111 1112222222 23456677777777653
No 228
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=83.39 E-value=2.7 Score=43.03 Aligned_cols=171 Identities=18% Similarity=0.115 Sum_probs=89.6
Q ss_pred cCceEEecCCCccccHHHHHHHHHcCCeEEeec--CCCHHH-------------HHHhhhcCcccccceEEecCCChhhH
Q psy3862 55 QGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHK--YYTLEE-------------WKAFAVQNPDVIKHVAVSSGISAKDL 119 (671)
Q Consensus 55 l~~Piv~a~M~~vt~~~lA~Ala~~gglgvIh~--n~~~Ee-------------q~~~i~~~p~~~~~~~v~~G~~~~d~ 119 (671)
|+-|++.+ ++..+++.++.+.|.-++ |- +.+.+. ..+.+++. ...|+.+.... .+.
T Consensus 20 ~~~~~i~~----~~~~~~a~~~~~~Ga~~i-~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~--~~~Pvi~~~~~--~~~ 90 (297)
T 2zbt_A 20 FKGGVIMD----VTTPEQAVIAEEAGAVAV-MALERVPADIRAQGGVARMSDPKIIKEIMAA--VSIPVMAKVRI--GHF 90 (297)
T ss_dssp GTTEEEEE----ESSHHHHHHHHHHTCSEE-EECSSCHHHHHHTTCCCCCCCHHHHHHHHTT--CSSCEEEEEET--TCH
T ss_pred hhCCeeee----echHHHHHHHHHCCCcEE-EeccccchHHHhhcCCccCCCHHHHHHHHHh--cCCCeEEEecc--CCH
Confidence 56677653 233788988888775554 32 222221 11222211 11233322111 124
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCce----E
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSV----C 195 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~----~ 195 (671)
+.++.+.++ +++.+.. .... +..+.++.+++.++...+++ .+.+.+.+..+.++|+|+|.+.+-.|.. +
T Consensus 91 ~~~~~~~~a--Gad~v~~--~~~~--~~~~~~~~~~~~~~~i~l~~-~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~ 163 (297)
T 2zbt_A 91 VEAMILEAI--GVDFIDE--SEVL--TPADEEHHIDKWKFKVPFVC-GARNLGEALRRIAEGAAMIRTKGEAGTGNVVEA 163 (297)
T ss_dssp HHHHHHHHT--TCSEEEE--ETTS--CCSCSSCCCCGGGCSSCEEE-EESSHHHHHHHHHTTCSEEEECCCSSSCCTHHH
T ss_pred HHHHHHHHC--CCCEEee--eCCC--ChHHHHHHHHHhCCCceEEe-ecCCHHHHHHHHHcCCCEEEEcccccCcchHHH
Confidence 566666666 7787722 1111 11122233222233333443 3567888888999999999886421111 0
Q ss_pred EEE-------ec---------------ccCCcchhhhhcc---ccC----CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 196 TTR-------LK---------------NKTSDFFLIQFYS---CIP----QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 196 ~t~-------v~---------------~~~~~~~~i~~i~---~~p----~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+. ++ ...+++..+..+. .+| +.|||.|.+.+..++++|||++-||
T Consensus 164 ~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvG 238 (297)
T 2zbt_A 164 VRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVG 238 (297)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEc
Confidence 000 00 0112222233332 245 5899999999999999999999999
No 229
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=83.32 E-value=2.8 Score=42.88 Aligned_cols=27 Identities=37% Similarity=0.538 Sum_probs=21.4
Q ss_pred eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 443 VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 443 ~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
+++||+-.+.+++++|+.|||+|.||.
T Consensus 182 I~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 182 VVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp EEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred EEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 447776566677779999999999985
No 230
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=82.79 E-value=9.7 Score=39.44 Aligned_cols=63 Identities=14% Similarity=0.084 Sum_probs=34.7
Q ss_pred HHHHcCCcEEEEccccc--cccccccccccccccccccccccccccCceeeccccCchhHHH-HHH-cCCcEEEECc
Q psy3862 397 KAMGAGADFVMLGGMFA--GHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMG-AGADFVMLGG 469 (671)
Q Consensus 397 ~l~~aG~d~i~id~~a~--gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~-aGAd~V~vG~ 469 (671)
.+.++|+|+|.+.+... +++. ...+..+..+++ --.++..|-+.+.+-+. +++ .|||.|++|.
T Consensus 148 ~l~~~G~d~i~v~g~~~~~~~~~---------~~~~~~i~~i~~-~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR 214 (318)
T 1vhn_A 148 ILVEEGVDEVFIHTRTVVQSFTG---------RAEWKALSVLEK-RIPTFVSGDIFTPEDAKRALEESGCDGLLVAR 214 (318)
T ss_dssp HHHHTTCCEEEEESSCTTTTTSS---------CCCGGGGGGSCC-SSCEEEESSCCSHHHHHHHHHHHCCSEEEESG
T ss_pred HHHHhCCCEEEEcCCCccccCCC---------CcCHHHHHHHHc-CCeEEEECCcCCHHHHHHHHHcCCCCEEEECH
Confidence 34678999999864321 1211 011223333444 11244444455555544 676 7999999996
No 231
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=82.55 E-value=3.1 Score=43.89 Aligned_cols=25 Identities=40% Similarity=0.675 Sum_probs=19.7
Q ss_pred eccccCchhHHHHHHcCCcEEEECc
Q psy3862 445 DGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 445 ~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
.||+-.+.++.+++++|||+|+||.
T Consensus 248 eGGI~Tpeda~~~l~~GaDgV~VGs 272 (330)
T 2yzr_A 248 AGGVATPADAALMMQLGSDGVFVGS 272 (330)
T ss_dssp CSCCCSHHHHHHHHHTTCSCEEESH
T ss_pred ECCCCCHHHHHHHHHcCcCEEeeHH
Confidence 6775456666668899999999995
No 232
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=82.32 E-value=1 Score=45.77 Aligned_cols=108 Identities=18% Similarity=0.032 Sum_probs=62.8
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEe
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRL 199 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v 199 (671)
.++.+.... ++|.+++..+.-. ..+.++++..++ +. ...+ ..+.+.+.++.+++.|+|.|-+..-. +
T Consensus 119 ~qi~~a~~~--GAD~VlL~~~~l~-~~l~~l~~~a~~-lG-l~~l-vev~~~~E~~~a~~~gad~IGvn~~~-------l 185 (254)
T 1vc4_A 119 FMLEEARAF--GASAALLIVALLG-ELTGAYLEEARR-LG-LEAL-VEVHTERELEIALEAGAEVLGINNRD-------L 185 (254)
T ss_dssp HHHHHHHHT--TCSEEEEEHHHHG-GGHHHHHHHHHH-HT-CEEE-EEECSHHHHHHHHHHTCSEEEEESBC-------T
T ss_pred HHHHHHHHc--CCCEEEECccchH-HHHHHHHHHHHH-CC-CeEE-EEECCHHHHHHHHHcCCCEEEEcccc-------C
Confidence 345555565 8888887643111 223333332222 32 1222 23567778888999999999542211 1
Q ss_pred cccCCcch----hhhhcc----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 200 KNKTSDFF----LIQFYS----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 200 ~~~~~~~~----~i~~i~----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+...+++. +.+.+. .+| +.|||.|.+.++.+.+ ||||+-||
T Consensus 186 ~~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVG 236 (254)
T 1vc4_A 186 ATLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIG 236 (254)
T ss_dssp TTCCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEEC
T ss_pred cCCCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEe
Confidence 11111211 223331 234 6899999999999999 99999999
No 233
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=82.06 E-value=0.62 Score=48.19 Aligned_cols=58 Identities=19% Similarity=0.170 Sum_probs=40.9
Q ss_pred HHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 174 VEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 174 a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+++..+.|.+++.+|++. .. .+..++..++ .+| ++|||-|.++++.++++|||+|-||
T Consensus 192 a~~gad~G~~lV~LD~~~-~~---------v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVG 256 (286)
T 3vk5_A 192 LHVARAFGFHMVYLYSRN-EH---------VPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFA 256 (286)
T ss_dssp HHHHHHTTCSEEEEECSS-SC---------CCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEEcCCC-Cc---------CCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEC
Confidence 344457888999999744 11 1112222221 245 7999999999999999999999999
No 234
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=81.09 E-value=5.6 Score=38.09 Aligned_cols=109 Identities=17% Similarity=0.068 Sum_probs=55.8
Q ss_pred HHHHHHHcCCeEEE-ccCCCHHHHHHHHhcCcccccceeeecc--cChhh-HHHHHHcCCcEEEEc-ccccccc-ccccc
Q psy3862 348 MAKHLAKHGLFTTI-HKYYTLEEWKAFAVQNPDVIKHVADGGC--TSPGD-VAKAMGAGADFVMLG-GMFAGHD-QSGGE 421 (671)
Q Consensus 348 mA~~la~~Gglgvi-hr~~~~e~~~~~v~~~~~~~~~v~~~~~--~~~~~-~~~l~~aG~d~i~id-~~a~gh~-~~~~~ 421 (671)
.+....+.|.=++. |-..+.+...+.++..++.-..+..+.. .++++ +..+.+.|+|++.+. +...+.. ....+
T Consensus 69 ~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~ 148 (207)
T 3ajx_A 69 EADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLN 148 (207)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTH
T ss_pred HHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHHHhCCCEEEEEecccccccCCCchH
Confidence 47777888876665 8766544433332221110001222111 14444 556667799999432 1111110 11111
Q ss_pred ccccccccccccccccccc----CceeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 422 LTNIEYMFFPLVGDMNSYL----GGVVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~----~~~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
+.+++.. +-+++||+ ...+..+++++|||+|-||.
T Consensus 149 ------------~~i~~~~~~~~pi~v~GGI-~~~~~~~~~~aGad~vvvGs 187 (207)
T 3ajx_A 149 ------------GLLAAGEKARVPFSVAGGV-KVATIPAVQKAGAEVAVAGG 187 (207)
T ss_dssp ------------HHHHHHHHHTSCEEEESSC-CGGGHHHHHHTTCSEEEESH
T ss_pred ------------HHHHHhhCCCCCEEEECCc-CHHHHHHHHHcCCCEEEEee
Confidence 1222221 12467774 56677778999999999985
No 235
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=80.89 E-value=4 Score=40.78 Aligned_cols=111 Identities=17% Similarity=0.095 Sum_probs=58.0
Q ss_pred HHHHHHHcCCeEE-EccCC---CHHHHHHHHhcCcccccceeeecc--cChhhHHHHHHcCCcEEEEccccccccccccc
Q psy3862 348 MAKHLAKHGLFTT-IHKYY---TLEEWKAFAVQNPDVIKHVADGGC--TSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421 (671)
Q Consensus 348 mA~~la~~Gglgv-ihr~~---~~e~~~~~v~~~~~~~~~v~~~~~--~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~ 421 (671)
....+++.|.=.+ +|-.. ++++..+.+++.-- .+..+-. +..+.+..++ .++|++.+-.+-.|...+..
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~---k~gv~lnp~tp~~~~~~~l-~~~D~VlvmsV~pGfggQ~f- 146 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETINGQAFRLIDEIRRHDM---KVGLILNPETPVEAMKYYI-HKADKITVMTVDPGFAGQPF- 146 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTC---EEEEEECTTCCGGGGTTTG-GGCSEEEEESSCTTCSSCCC-
T ss_pred HHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCC---eEEEEEECCCcHHHHHHHH-hcCCEEEEeeeccCcCCccc-
Confidence 3466677776444 35322 36667777665311 1111111 2224444443 38999987633345542110
Q ss_pred cccccccccccccccccccC----c---eeeccccCchhHHHHHHcCCcEEEEC
Q psy3862 422 LTNIEYMFFPLVGDMNSYLG----G---VVDGGCTSPGDVAKAMGAGADFVMLG 468 (671)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~----~---~i~gG~v~t~~~a~~l~aGAd~V~vG 468 (671)
+....+.+..+|+.+. + .++|| +...++.++.++|||++.+|
T Consensus 147 ----~~~~l~kI~~lr~~~~~~~~~~~I~VdGG-I~~~~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 147 ----IPEMLDKLAELKAWREREGLEYEIEVDGS-CNQATYEKLMAAGADVFIVG 195 (231)
T ss_dssp ----CTTHHHHHHHHHHHHHHHTCCCEEEEESC-CSTTTHHHHHHHTCCEEEEC
T ss_pred ----cHHHHHHHHHHHHHHhccCCCceEEEECC-cCHHHHHHHHHcCCCEEEEc
Confidence 1111112223333331 1 45777 57777778899999999998
No 236
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=80.55 E-value=2.2 Score=43.80 Aligned_cols=68 Identities=19% Similarity=0.220 Sum_probs=49.9
Q ss_pred hHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 118 DLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 118 d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
.++.+.+.+++ ++|+|-+|.. .+..+.+.++.++..+|+..+++....+.+.++.+.++|||.|.+.+
T Consensus 191 tlee~~~A~~a--GaD~I~ld~~--~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 191 SFEEAKNAMNA--GADIVMCDNL--SVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp SHHHHHHHHHH--TCSEEEEETC--CHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHTTTCSEEECTH
T ss_pred CHHHHHHHHHc--CCCEEEECCC--CHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHHHHHcCCcEEEEcH
Confidence 45666666677 7899988853 34555555665666688877776655699999999999999997643
No 237
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=80.45 E-value=0.98 Score=47.64 Aligned_cols=24 Identities=33% Similarity=0.398 Sum_probs=23.5
Q ss_pred ccccccHHHHHHHHHcCCCEEEEc
Q psy3862 218 AGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 218 aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
-|||.|.+.++.++++|||||-||
T Consensus 248 eGGI~Tpeda~~~l~~GaDgV~VG 271 (330)
T 2yzr_A 248 AGGVATPADAALMMQLGSDGVFVG 271 (330)
T ss_dssp CSCCCSHHHHHHHHHTTCSCEEES
T ss_pred ECCCCCHHHHHHHHHcCcCEEeeH
Confidence 899999999999999999999999
No 238
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=80.39 E-value=6.6 Score=44.86 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=23.5
Q ss_pred cccccccC-ceeeccccCchhHHH-HHHcC-CcEEEEC
Q psy3862 434 GDMNSYLG-GVVDGGCTSPGDVAK-AMGAG-ADFVMLG 468 (671)
Q Consensus 434 ~~~~~~~~-~~i~gG~v~t~~~a~-~l~aG-Ad~V~vG 468 (671)
..+|+.+. .++..|.+.+.+.++ +++.| ||.|.+|
T Consensus 273 ~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~g 310 (671)
T 1ps9_A 273 RKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMA 310 (671)
T ss_dssp HHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 34454443 255566666777666 67888 9999999
No 239
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=80.38 E-value=3.7 Score=40.86 Aligned_cols=111 Identities=23% Similarity=0.156 Sum_probs=55.6
Q ss_pred HHHHHHcCCeE-EEccC--CCHHHHHHHHhcCcccccceeeec--ccChhhHHHHHHcCCcEEEEccccccccccccccc
Q psy3862 349 AKHLAKHGLFT-TIHKY--YTLEEWKAFAVQNPDVIKHVADGG--CTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELT 423 (671)
Q Consensus 349 A~~la~~Gglg-vihr~--~~~e~~~~~v~~~~~~~~~v~~~~--~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~ 423 (671)
...+++.|.=. .+|-- .++.+..+.+++.-- .+..+- .+..+.++.+.+ .+|++.+..+-.|..-...
T Consensus 80 i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~---k~gval~p~t~~e~l~~~l~-~~D~Vl~msv~pGf~Gq~f--- 152 (228)
T 3ovp_A 80 VKPMAVAGANQYTFHLEATENPGALIKDIRENGM---KVGLAIKPGTSVEYLAPWAN-QIDMALVMTVEPGFGGQKF--- 152 (228)
T ss_dssp HHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTC---EEEEEECTTSCGGGTGGGGG-GCSEEEEESSCTTTCSCCC---
T ss_pred HHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCC---CEEEEEcCCCCHHHHHHHhc-cCCeEEEeeecCCCCCccc---
Confidence 34455555322 23421 246667777665311 111111 122344444443 4899988744445532111
Q ss_pred cccccccccccccccccCc---eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 424 NIEYMFFPLVGDMNSYLGG---VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~---~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
+....+.+..+|+..++ .++||+ ...++.++.++|||++.+|.
T Consensus 153 --~~~~l~ki~~lr~~~~~~~I~VdGGI-~~~t~~~~~~aGAd~~VvGs 198 (228)
T 3ovp_A 153 --MEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVSGS 198 (228)
T ss_dssp --CGGGHHHHHHHHHHCTTCEEEEESSC-STTTHHHHHHHTCCEEEESH
T ss_pred --CHHHHHHHHHHHHhcCCCCEEEeCCc-CHHHHHHHHHcCCCEEEEeH
Confidence 01111112333443332 468884 66666778899999999985
No 240
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=79.89 E-value=3 Score=43.10 Aligned_cols=68 Identities=21% Similarity=0.210 Sum_probs=51.2
Q ss_pred hHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 118 DLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 118 d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
..+++++.+++ ++|.|.+|.. .+..+.+.++.++..+|...+.+....+.+.++.+.+.|||+|.+.+
T Consensus 203 t~eea~eal~a--GaD~I~LDn~--~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 203 SLEQLDAVLPE--KPELILLDNF--AVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp SHHHHHHHGGG--CCSEEEEETC--CHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred CHHHHHHHHHc--CCCEEEECCC--CHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 35677777776 7788888853 45666677777776677766666656789999999999999998754
No 241
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=79.87 E-value=9 Score=40.96 Aligned_cols=64 Identities=14% Similarity=-0.020 Sum_probs=41.3
Q ss_pred HHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEEEc
Q psy3862 172 EMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIKVG 241 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-AdgvkVG 241 (671)
+.++.|.++|+|+|.+-.+ ... . ... ......+..++ .+| ..|++ |.+.+..+++.| ||+|-+|
T Consensus 259 ~la~~le~~Gvd~i~v~~~--~~~-~-~~~-~~~~~~~~~ik~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 259 YLAGELDRRGLAYLHFNEP--DWI-G-GDI-TYPEGFREQMRQRFKGGLIYCGNY-DAGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp HHHHHHHHTTCSEEEEECC--C---------CCCTTHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHcCCCEEEEeCC--ccc-C-CCC-cchHHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHCCCceEEeec
Confidence 5588999999999988432 110 0 000 01222333332 246 68899 899999999998 9999777
No 242
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=79.53 E-value=21 Score=36.30 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=58.1
Q ss_pred CceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCc----c
Q psy3862 131 EIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSD----F 206 (671)
Q Consensus 131 ~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~----~ 206 (671)
|+|+|.+-.+-=....+.++++..++..-...+ -+.+++.++.++++|+++|=|.--. ++.-..+ .
T Consensus 126 GADaILLI~a~L~~~~l~~l~~~A~~lGl~~Lv---EVh~~~El~rAl~~~a~iIGINNRn-------L~tf~vdl~~t~ 195 (258)
T 4a29_A 126 GADTVLLIVKILTERELESLLEYARSYGMEPLI---LINDENDLDIALRIGARFIGIMSRD-------FETGEINKENQR 195 (258)
T ss_dssp TCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEE---EESSHHHHHHHHHTTCSEEEECSBC-------TTTCCBCHHHHH
T ss_pred CCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHH---hcchHHHHHHHhcCCCcEEEEeCCC-------ccccccCHHHHH
Confidence 677776543321112333444433333222221 4678999999999999999442111 1100011 1
Q ss_pred hhhhhc-cccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 207 FLIQFY-SCIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 207 ~~i~~i-~~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.+.+ ...+ .-+||-|.+.++.+..+|+||+.||
T Consensus 196 ~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVG 233 (258)
T 4a29_A 196 KLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLIS 233 (258)
T ss_dssp HHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEEC
T ss_pred HHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEEC
Confidence 122221 0111 5799999999999999999999999
No 243
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=79.30 E-value=1.5 Score=45.37 Aligned_cols=69 Identities=22% Similarity=0.290 Sum_probs=52.4
Q ss_pred hhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 117 KDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 117 ~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
++.+++.+.+++ ++|+|.+|.. .++.+.+.++.++..+|...+.+....+.+.++.+.++|||+|.+.+
T Consensus 201 ~tleea~eA~~a--GaD~I~LDn~--~~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 201 ENLEDALRAVEA--GADIVMLDNL--SPEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp SSHHHHHHHHHT--TCSEEEEESC--CHHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTTCCEEEEGG
T ss_pred CCHHHHHHHHHc--CCCEEEECCC--CHHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcCCCEEEEeH
Confidence 346778888887 7899998853 34666666776666677777766666788999999999999998755
No 244
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=79.28 E-value=4.6 Score=41.13 Aligned_cols=52 Identities=12% Similarity=0.236 Sum_probs=37.4
Q ss_pred eEEEccCC-----CHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEc
Q psy3862 358 FTTIHKYY-----TLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLG 409 (671)
Q Consensus 358 lgvihr~~-----~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id 409 (671)
+|+=+||. |++.-.+.....|+-...|+.||..+++|+.++.++|+|.+.|.
T Consensus 177 IGINNRnL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVG 233 (258)
T 4a29_A 177 IGIMSRDFETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLIS 233 (258)
T ss_dssp EEECSBCTTTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEEC
T ss_pred EEEeCCCccccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEEC
Confidence 34445543 35555555555666555677788889999999999999999987
No 245
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=79.08 E-value=15 Score=39.16 Aligned_cols=102 Identities=20% Similarity=0.152 Sum_probs=63.5
Q ss_pred HHHhCCCceEEEeeccCCCC------------------------hHHHHHHHHHHHhC---CCceEEEEEe---------
Q psy3862 125 ILAALPEIEYICLDVANGYT------------------------QTFVDFVRRIREMY---PKHVIIAGNV--------- 168 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~~------------------------~~~~~~ik~lr~~~---P~~~li~g~v--------- 168 (671)
..++ +.|.|-++.+||+. +-..+.++.+|+.. |...++.+.-
T Consensus 170 A~~a--GfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~ 247 (361)
T 3gka_A 170 ARAA--GFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSD 247 (361)
T ss_dssp HHHT--TCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSC
T ss_pred HHHc--CCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCC
Confidence 3445 78888888888651 12345666666543 3333333211
Q ss_pred ---ccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEE
Q psy3862 169 ---VTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIK 239 (671)
Q Consensus 169 ---~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-Adgvk 239 (671)
...+.++.|.++|+|+|.+-.+. .. + +.+..++ .+| ..|++ |.+.+.++++.| ||.|-
T Consensus 248 ~~~~~~~la~~l~~~Gvd~i~v~~~~-~~---------~--~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~ 314 (361)
T 3gka_A 248 PAATFGHVARELGRRRIAFLFARESF-GG---------D--AIGQQLKAAFGGPFIVNENF-TLDSAQAALDAGQADAVA 314 (361)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC-ST---------T--CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEECCCC-CC---------H--HHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHcCCccEEE
Confidence 01356788999999999774422 00 0 1122222 245 68899 999999999998 99996
Q ss_pred Ec
Q psy3862 240 VG 241 (671)
Q Consensus 240 VG 241 (671)
+|
T Consensus 315 iG 316 (361)
T 3gka_A 315 WG 316 (361)
T ss_dssp ES
T ss_pred EC
Confidence 66
No 246
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=77.62 E-value=0.86 Score=44.77 Aligned_cols=109 Identities=16% Similarity=0.035 Sum_probs=61.3
Q ss_pred HHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEE--EEEeccHHHHHHHHHCCCcEEEECcC-----CCc
Q psy3862 121 GLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVII--AGNVVTGEMVEELILSGADVIKVGIG-----PGS 193 (671)
Q Consensus 121 rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li--~g~v~t~e~a~~Li~AGaD~IvVdga-----~G~ 193 (671)
.++...++ +++.+++....+. +...+.++.+++.. .... .-++.|.++++.+.+.|+|.+++-.+ .|.
T Consensus 75 ~~~~~~~a--Gad~i~vh~~~~~-~~~~~~~~~~~~~g--~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~~~~~~~~g~ 149 (218)
T 3jr2_A 75 LSRMAFEA--GADWITVSAAAHI-ATIAACKKVADELN--GEIQIEIYGNWTMQDAKAWVDLGITQAIYHRSRDAELAGI 149 (218)
T ss_dssp HHHHHHHH--TCSEEEEETTSCH-HHHHHHHHHHHHHT--CEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHHTC
T ss_pred HHHHHHhc--CCCEEEEecCCCH-HHHHHHHHHHHHhC--CccceeeeecCCHHHHHHHHHcCccceeeeeccccccCCC
Confidence 34556666 8888877644321 11233344444322 1111 22335788899999999998866210 011
Q ss_pred eEEEEecccCCcchhhhhcc--ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 194 VCTTRLKNKTSDFFLIQFYS--CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 194 ~~~t~v~~~~~~~~~i~~i~--~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+... .+..+..+. .+| +.||| +.+.+..++++|||++=||
T Consensus 150 ~~~~~------~l~~i~~~~~~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvG 194 (218)
T 3jr2_A 150 GWTTD------DLDKMRQLSALGIELSITGGI-VPEDIYLFEGIKTKTFIAG 194 (218)
T ss_dssp CSCHH------HHHHHHHHHHTTCEEEEESSC-CGGGGGGGTTSCEEEEEES
T ss_pred cCCHH------HHHHHHHHhCCCCCEEEECCC-CHHHHHHHHHcCCCEEEEc
Confidence 11000 011111111 345 68999 6899999999999999888
No 247
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=77.32 E-value=8.7 Score=41.87 Aligned_cols=95 Identities=14% Similarity=0.073 Sum_probs=48.3
Q ss_pred HHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccc--c-C--CccccccHHHHHHHHHcCCCEEEEcccCCC
Q psy3862 172 EMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSC--I-P--QAGNVVTGEMVEELILSGADVIKVGIGPGS 246 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~--~-p--~aGnV~t~~~a~~li~aGAdgvkVG~~~~~ 246 (671)
+-++.|.++|+|.|-+.. ++.+.. +..-++.+.. . + .+......+++..++++|++.|.+-+....
T Consensus 65 ~Ia~~L~~~Gv~~IEvG~-P~asp~--------d~~~~~~i~~~~~~~~v~~~~r~~~~di~~A~~aG~~~V~i~~s~Sd 135 (423)
T 3ivs_A 65 QIAKALDNFGVDYIELTS-PVASEQ--------SRQDCEAICKLGLKCKILTHIRCHMDDARVAVETGVDGVDVVIGTSQ 135 (423)
T ss_dssp HHHHHHHHHTCSEEEECC-TTSCHH--------HHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEEEEEEEC--
T ss_pred HHHHHHHHcCCCEEEEee-cccCHH--------HHHHHHHHHhcCCCCEEEEeeccChhhHHHHHHcCCCEEEEEeeccH
Confidence 456678888888887743 332200 0000001100 0 1 244566788899999999999888765543
Q ss_pred ccccceecccCcchh-hhHHHHHHHhhhcCC
Q psy3862 247 VCTTRLKTGVGYPQF-SAVLECADAAHGLGG 276 (671)
Q Consensus 247 ~~~Tr~V~gv~~~~~-~~~~~~~~~~~~~~~ 276 (671)
.+. +...+...-+. ..+.++.+.|+++|.
T Consensus 136 ~~~-~~~l~~s~~e~l~~~~~~v~~ak~~G~ 165 (423)
T 3ivs_A 136 YLR-KYSHGKDMTYIIDSATEVINFVKSKGI 165 (423)
T ss_dssp ------------CHHHHHHHHHHHHHHTTTC
T ss_pred HHH-HHHcCCCHHHHHHHHHHHHHHHHHCCC
Confidence 322 23344444333 345667777776653
No 248
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=77.22 E-value=6.7 Score=44.79 Aligned_cols=115 Identities=17% Similarity=0.265 Sum_probs=65.3
Q ss_pred HHHhCCCceEEEeeccCCCC------------------------hHHHHHHHHHHHhC-CC---ceEEEEEe-----cc-
Q psy3862 125 ILAALPEIEYICLDVANGYT------------------------QTFVDFVRRIREMY-PK---HVIIAGNV-----VT- 170 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~~------------------------~~~~~~ik~lr~~~-P~---~~li~g~v-----~t- 170 (671)
..++ +.|.|-++.+||+. +-..+.++.+|+.. |+ ..++..+- .+
T Consensus 150 a~~a--Gfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~ 227 (671)
T 1ps9_A 150 AREA--GYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTF 227 (671)
T ss_dssp HHHT--TCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCH
T ss_pred HHHc--CCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCH
Confidence 3444 77888787777651 11345566666543 33 33444331 12
Q ss_pred ---HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCc---chhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEE
Q psy3862 171 ---GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSD---FFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVI 238 (671)
Q Consensus 171 ---~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~---~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-Adgv 238 (671)
.+.++.|.++|+|+|.+.++.-...........+. +..+..++ .+| ..|++-|.+.+..+++.| ||+|
T Consensus 228 ~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V 307 (671)
T 1ps9_A 228 AETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMV 307 (671)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEE
Confidence 35678899999999977321000000000000111 12222232 356 689999999999999998 9999
Q ss_pred EEc
Q psy3862 239 KVG 241 (671)
Q Consensus 239 kVG 241 (671)
-+|
T Consensus 308 ~~g 310 (671)
T 1ps9_A 308 SMA 310 (671)
T ss_dssp EES
T ss_pred EeC
Confidence 776
No 249
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=77.18 E-value=0.53 Score=47.45 Aligned_cols=61 Identities=23% Similarity=0.282 Sum_probs=45.0
Q ss_pred cHHHHHHHHHCCC-----cEEEECcCCCceEEEEecccCCcchhhhhcc----ccC--CccccccHHHHHHHHHcCCCEE
Q psy3862 170 TGEMVEELILSGA-----DVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS----CIP--QAGNVVTGEMVEELILSGADVI 238 (671)
Q Consensus 170 t~e~a~~Li~AGa-----D~IvVdga~G~~~~t~v~~~~~~~~~i~~i~----~~p--~aGnV~t~~~a~~li~aGAdgv 238 (671)
++++++...++|. .+|-.++ .|.. +...++..+. .+| ++|||-|.++++.+++ |||+|
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~-~G~~---------~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~V 215 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEY-SGTY---------GNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTI 215 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEC-TTSC---------CCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEE
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeC-CCCc---------chHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEE
Confidence 5688998888888 8888887 4431 1222222221 345 7999999999999999 99999
Q ss_pred EEc
Q psy3862 239 KVG 241 (671)
Q Consensus 239 kVG 241 (671)
-||
T Consensus 216 IVG 218 (234)
T 2f6u_A 216 IVG 218 (234)
T ss_dssp EEC
T ss_pred EEC
Confidence 999
No 250
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=77.17 E-value=7.4 Score=41.66 Aligned_cols=92 Identities=14% Similarity=0.097 Sum_probs=51.9
Q ss_pred HHHHHHHHCCCcEEEECcCCCceE-----EEEecccCCcchhhhhccccC-CccccccHHHHHHHHHcCCCEEEEcccCC
Q psy3862 172 EMVEELILSGADVIKVGIGPGSVC-----TTRLKNKTSDFFLIQFYSCIP-QAGNVVTGEMVEELILSGADVIKVGIGPG 245 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~~~-----~t~v~~~~~~~~~i~~i~~~p-~aGnV~t~~~a~~li~aGAdgvkVG~~~~ 245 (671)
+-++.|.++|+|.|-+.. +..+. ...+.+..++ .+ .+-+-+..+.+..++++|+|.|++-+...
T Consensus 29 ~ia~~L~~~Gv~~IE~g~-p~~~~~~~~~~~~i~~~~~~---------~~v~~~~r~~~~di~~a~~~g~~~v~i~~~~s 98 (382)
T 2ztj_A 29 EIAKALDEFGIEYIEVTT-PVASPQSRKDAEVLASLGLK---------AKVVTHIQCRLDAAKVAVETGVQGIDLLFGTS 98 (382)
T ss_dssp HHHHHHHHHTCSEEEECC-TTSCHHHHHHHHHHHTSCCS---------SEEEEEEESCHHHHHHHHHTTCSEEEEEECC-
T ss_pred HHHHHHHHcCcCEEEEcC-CcCCHHHHHHHHHHHhcCCC---------cEEEEEcccChhhHHHHHHcCCCEEEEEeccC
Confidence 457778889999998854 22210 0011111111 11 23344567888999999999998876433
Q ss_pred CccccceecccCcch-hhhHHHHHHHhhhcC
Q psy3862 246 SVCTTRLKTGVGYPQ-FSAVLECADAAHGLG 275 (671)
Q Consensus 246 ~~~~Tr~V~gv~~~~-~~~~~~~~~~~~~~~ 275 (671)
.... + ..+..+-+ +..+.++.++++++|
T Consensus 99 ~~~~-~-~~~~s~~e~l~~~~~~v~~ak~~g 127 (382)
T 2ztj_A 99 KYLR-A-PHGRDIPRIIEEAKEVIAYIREAA 127 (382)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHH-H-HhCCCHHHHHHHHHHHHHHHHHcC
Confidence 2222 2 55555555 566778888888766
No 251
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=77.07 E-value=11 Score=39.55 Aligned_cols=73 Identities=19% Similarity=0.219 Sum_probs=43.9
Q ss_pred CCChhhHHH-HHHHHHhCCCceEEEeeccC--C------CChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCC-C
Q psy3862 113 GISAKDLAG-LKEILAALPEIEYICLDVAN--G------YTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSG-A 182 (671)
Q Consensus 113 G~~~~d~~r-l~~l~~a~~~~d~Ivld~a~--G------~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AG-a 182 (671)
|.+.++... ++.+-++ +++++.+.... . ......+.++++++..+...+.+|.+.+.+.++++++.| +
T Consensus 235 g~~~~~~~~la~~L~~~--Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~a 312 (349)
T 3hgj_A 235 GWSLEDTLAFARRLKEL--GVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSA 312 (349)
T ss_dssp SCCHHHHHHHHHHHHHT--TCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSC
T ss_pred CCCHHHHHHHHHHHHHc--CCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCc
Confidence 345455433 3444444 68888775310 0 012245666777665432234445667899999999999 9
Q ss_pred cEEEE
Q psy3862 183 DVIKV 187 (671)
Q Consensus 183 D~IvV 187 (671)
|+|.+
T Consensus 313 D~V~i 317 (349)
T 3hgj_A 313 DLVLL 317 (349)
T ss_dssp SEEEE
T ss_pred eEEEe
Confidence 99966
No 252
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=76.90 E-value=9.3 Score=40.35 Aligned_cols=111 Identities=21% Similarity=0.358 Sum_probs=66.8
Q ss_pred HHHhCCCceEEEeeccCCCC------------------------hHHHHHHHHHHHhC----CCceEEEEEe--------
Q psy3862 125 ILAALPEIEYICLDVANGYT------------------------QTFVDFVRRIREMY----PKHVIIAGNV-------- 168 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~~------------------------~~~~~~ik~lr~~~----P~~~li~g~v-------- 168 (671)
..++ +.|.|-++.+||+. +-..+.++.+|+.. |...++-..-
T Consensus 152 a~~a--GfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~ 229 (343)
T 3kru_A 152 ANLA--GYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINI 229 (343)
T ss_dssp HHHH--TCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCH
T ss_pred cccc--CCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccH
Confidence 4455 78888888888762 12355666666643 4444555421
Q ss_pred -ccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCC--cchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEE
Q psy3862 169 -VTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTS--DFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIK 239 (671)
Q Consensus 169 -~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~--~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-Adgvk 239 (671)
...+.++.|.++ +|+|.+..+ +... ... ...+ .+..+..++ .+| ..|++-|.+.+..+++.| ||.|-
T Consensus 230 ~~~~~~a~~l~~~-vd~i~vs~g-~~~~-~~~-~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~ 305 (343)
T 3kru_A 230 DMMVEYINMIKDK-VDLIDVSSG-GLLN-VDI-NLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVA 305 (343)
T ss_dssp HHHHHHHHHHTTT-CSEEEEECC-CSSC-CCC-CCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHhhcc-ccEEeccCC-ceEe-eee-cccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHH
Confidence 123567888889 999988321 1110 000 0011 122222232 356 689999999999999998 99997
Q ss_pred Ec
Q psy3862 240 VG 241 (671)
Q Consensus 240 VG 241 (671)
+|
T Consensus 306 iG 307 (343)
T 3kru_A 306 LG 307 (343)
T ss_dssp ES
T ss_pred HH
Confidence 77
No 253
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=76.88 E-value=14 Score=39.23 Aligned_cols=57 Identities=18% Similarity=0.116 Sum_probs=39.8
Q ss_pred HHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEEEc
Q psy3862 172 EMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIKVG 241 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-AdgvkVG 241 (671)
+.++.|.++|+|+|.+-.+. .. + +.+..++ .+| .+|++ |.+.+..+++.| ||.|-+|
T Consensus 246 ~la~~l~~~Gvd~i~v~~~~-~~---------~--~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iG 308 (362)
T 4ab4_A 246 YVARELGKRGIAFICSRERE-AD---------D--SIGPLIKEAFGGPYIVNERF-DKASANAALASGKADAVAFG 308 (362)
T ss_dssp HHHHHHHHTTCSEEEEECCC-CT---------T--CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHhCCCEEEECCCC-CC---------H--HHHHHHHHHCCCCEEEeCCC-CHHHHHHHHHcCCccEEEEC
Confidence 45888999999999774422 00 0 1122222 245 68899 999999999998 9999766
No 254
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=76.00 E-value=4.7 Score=44.23 Aligned_cols=41 Identities=10% Similarity=-0.097 Sum_probs=26.2
Q ss_pred CcceeeeeeecccCCCcccCceEEecCCCccccHHHHHHHHHcCCeEE
Q psy3862 37 SEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTT 84 (671)
Q Consensus 37 ~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt~~~lA~Ala~~gglgv 84 (671)
++..|++++ .+++|+-||+.+++.......+ .++++. |+|+
T Consensus 78 ~~~~l~~~i-----~Gl~~~NPvglAAG~dk~~~~~-~~l~~~-GfG~ 118 (443)
T 1tv5_A 78 DSIYACTNI-----KHLDFINPFGVAAGFDKNGVCI-DSILKL-GFSF 118 (443)
T ss_dssp CCGGGCEEE-----TTEEESSSEEECTTTTTTCSSH-HHHHTT-TCSE
T ss_pred CCccCCeEE-----CCEEeCCCcEECCcccCccHHH-HHHHhc-CCCE
Confidence 456678888 5899999999998764332222 235554 4544
No 255
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=75.75 E-value=6.2 Score=40.83 Aligned_cols=72 Identities=22% Similarity=0.254 Sum_probs=43.7
Q ss_pred eccHHHHHHHHHCCCcEEEECcC---CCceEEE----EecccCCcchhhhhccccCCccccccH--------HHHHHHHH
Q psy3862 168 VVTGEMVEELILSGADVIKVGIG---PGSVCTT----RLKNKTSDFFLIQFYSCIPQAGNVVTG--------EMVEELIL 232 (671)
Q Consensus 168 v~t~e~a~~Li~AGaD~IvVdga---~G~~~~t----~v~~~~~~~~~i~~i~~~p~aGnV~t~--------~~a~~li~ 232 (671)
+.+.+.+.+++++|||-|-++.+ +|...+. .+++ ..++++.-| ..|-.|+..-- +.+..+.+
T Consensus 46 ~~s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~-~~~ipV~vM--IRPRgGdF~Ys~~E~~~M~~dI~~~~~ 122 (287)
T 3iwp_A 46 VDSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQ-SVQIPVFVM--IRPRGGDFLYSDREIEVMKADIRLAKL 122 (287)
T ss_dssp ESSHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHT-TCCSCEEEE--CCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHH-hcCCCeEEE--EecCCCCcccCHHHHHHHHHHHHHHHH
Confidence 45678999999999999999874 3322111 1111 111111111 12556665533 56777888
Q ss_pred cCCCEEEEcc
Q psy3862 233 SGADVIKVGI 242 (671)
Q Consensus 233 aGAdgvkVG~ 242 (671)
+|||||=+|.
T Consensus 123 ~GAdGvVfG~ 132 (287)
T 3iwp_A 123 YGADGLVFGA 132 (287)
T ss_dssp TTCSEEEECC
T ss_pred cCCCEEEEee
Confidence 9999998884
No 256
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=75.30 E-value=6.3 Score=40.02 Aligned_cols=124 Identities=20% Similarity=0.213 Sum_probs=71.8
Q ss_pred ceEEecCCCcc------ccHHHHHHHHHcCCeEEeecCCCHHHHHHhhhcCc-ccccceE-EecCCChhhHHHHHHHHHh
Q psy3862 57 VPIIAANMDTV------GTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNP-DVIKHVA-VSSGISAKDLAGLKEILAA 128 (671)
Q Consensus 57 ~Piv~a~M~~v------t~~~lA~Ala~~gglgvIh~n~~~Eeq~~~i~~~p-~~~~~~~-v~~G~~~~d~~rl~~l~~a 128 (671)
+|++- |++- +..+++...++.|.-|+|=..+++||..++..... .-++.+. +++..+ .+|++++.+.
T Consensus 89 ~Pivl--m~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~---~eRi~~ia~~ 163 (252)
T 3tha_A 89 KALVF--MVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTP---KERVKKLVKH 163 (252)
T ss_dssp SEEEE--ECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSC---HHHHHHHHTT
T ss_pred CCEEE--EeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCc---HHHHHHHHHh
Confidence 68875 6663 23568887777877798777788876444432111 1122232 222222 4778777666
Q ss_pred CCCceEEEeeccC---CCC----hHHHHHHHHHHHhCCCceEEEE-EeccHHHHHHHHHCCCcEEEECc
Q psy3862 129 LPEIEYICLDVAN---GYT----QTFVDFVRRIREMYPKHVIIAG-NVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 129 ~~~~d~Ivld~a~---G~~----~~~~~~ik~lr~~~P~~~li~g-~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
..+ ++..-... |.. ..+.+.++++|+.. ...+++| .+.+++.++.+.+ +||.++|++
T Consensus 164 a~g--FiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGS 228 (252)
T 3tha_A 164 AKG--FIYLLASIGITGTKSVEEAILQDKVKEIRSFT-NLPIFVGFGIQNNQDVKRMRK-VADGVIVGT 228 (252)
T ss_dssp CCS--CEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHTT-TSSEEEECH
T ss_pred CCC--eEEEEecCCCCCcccCCCHHHHHHHHHHHHhc-CCcEEEEcCcCCHHHHHHHHh-cCCEEEECH
Confidence 333 33222222 322 23456677776543 3445555 6779999998766 699999843
No 257
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=74.89 E-value=4.6 Score=42.37 Aligned_cols=53 Identities=13% Similarity=0.046 Sum_probs=27.6
Q ss_pred ccHHHHHHHHHc----CCCEEEEcccCCCccccceecccCcch-hhhHHHHHHHhhhcC
Q psy3862 222 VTGEMVEELILS----GADVIKVGIGPGSVCTTRLKTGVGYPQ-FSAVLECADAAHGLG 275 (671)
Q Consensus 222 ~t~~~a~~li~a----GAdgvkVG~~~~~~~~Tr~V~gv~~~~-~~~~~~~~~~~~~~~ 275 (671)
+..+++..++++ |++.|.+-+.. |-.-.+...+...-+ +..+.++.++|+++|
T Consensus 78 ~~~~~i~~a~~al~~ag~~~v~i~~s~-Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g 135 (325)
T 3eeg_A 78 AKEADINIAGEALRFAKRSRIHTGIGS-SDIHIEHKLRSTRENILEMAVAAVKQAKKVV 135 (325)
T ss_dssp SCHHHHHHHHHHHTTCSSEEEEEEEEC-SHHHHC----CCCTTGGGTTHHHHHHHHTTS
T ss_pred CCHHHHHHHHHhhcccCCCEEEEEecc-cHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC
Confidence 445666666666 88888775332 222223334444433 344566677777654
No 258
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=74.56 E-value=26 Score=37.63 Aligned_cols=51 Identities=20% Similarity=0.233 Sum_probs=29.2
Q ss_pred HHHHHHHHcCCCEEEEcccCCCccccce-ecccCcchhhhHHHHHHHhhhcCCcchh
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVCTTRL-KTGVGYPQFSAVLECADAAHGLGGHIIS 280 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~~Tr~-V~gv~~~~~~~~~~~~~~~~~~~~~~~~ 280 (671)
+.+.++-++|||.||.+.=- .-|+-- -.|.| ........++++++|.++++
T Consensus 160 ~~a~~~k~aGa~~vk~q~fk--prts~~~f~gl~---~egl~~L~~~~~~~Gl~~~t 211 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFK--PRTSPYDFQGLG---LEGLKILKRVSDEYGLGVIS 211 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSC--CCSSTTSCCCCT---HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCCeEEccccc--CCCChHhhcCCC---HHHHHHHHHHHHHcCCEEEE
Confidence 33455667999999999621 111100 11333 25556667777777777665
No 259
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=74.39 E-value=15 Score=39.15 Aligned_cols=66 Identities=17% Similarity=-0.011 Sum_probs=40.7
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-AdgvkVG 241 (671)
.+.++.|.++|+|+|.+-+..-....... .....+..++ .+| ..|++ |.+.+..+++.| ||.|-+|
T Consensus 259 ~~la~~le~~Gvd~i~v~~~~~~~~~~~~----~~~~~~~~vr~~~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~g 330 (376)
T 1icp_A 259 LYMVESLNKYDLAYCHVVEPRMKTAWEKI----ECTESLVPMRKAYKGTFIVAGGY-DREDGNRALIEDRADLVAYG 330 (376)
T ss_dssp HHHHHHHGGGCCSEEEEECCSCCC----------CCCCSHHHHHHCCSCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEcCCcccCCCCcc----ccHHHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHCCCCcEEeec
Confidence 36678888999999988432100000000 0111122221 256 58899 999999999998 9999777
No 260
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=74.17 E-value=0.94 Score=45.77 Aligned_cols=60 Identities=17% Similarity=0.185 Sum_probs=42.4
Q ss_pred HHHHHHHHHCCC----cEEEECcCCCceEEEEecccCCcchhhhhcc----ccC--CccccccHHHHHHHHHcCCCEEEE
Q psy3862 171 GEMVEELILSGA----DVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS----CIP--QAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 171 ~e~a~~Li~AGa----D~IvVdga~G~~~~t~v~~~~~~~~~i~~i~----~~p--~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
++++++..++|. -+|-.++ .|.. +...++..+. .+| ++|||-|.++++.+++ |||+|-|
T Consensus 141 ~~~~~~~a~~g~~~~~~~VYl~s-~G~~---------~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIV 209 (240)
T 1viz_A 141 MDDIVAYARVSELLQLPIFYLEY-SGVL---------GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVV 209 (240)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC-TTSC---------CCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEE
T ss_pred HHHHHHHHHhCcccCCCEEEEeC-CCcc---------ChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEE
Confidence 578888877764 6777776 4531 1222222221 245 7999999999999999 9999999
Q ss_pred c
Q psy3862 241 G 241 (671)
Q Consensus 241 G 241 (671)
|
T Consensus 210 G 210 (240)
T 1viz_A 210 G 210 (240)
T ss_dssp C
T ss_pred C
Confidence 9
No 261
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=73.88 E-value=4 Score=41.25 Aligned_cols=113 Identities=13% Similarity=0.156 Sum_probs=57.8
Q ss_pred HHHHHHHHcCCeE-EEccC--CCHHHHHHHHhcCcccccceeeec--ccChhhHHHHHHcCCcEEEEccccccccccccc
Q psy3862 347 EMAKHLAKHGLFT-TIHKY--YTLEEWKAFAVQNPDVIKHVADGG--CTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 421 (671)
Q Consensus 347 ~mA~~la~~Gglg-vihr~--~~~e~~~~~v~~~~~~~~~v~~~~--~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~ 421 (671)
+....+++.|.=. .+|-- .++.+.++.+++.-- .+..+- .|..+.++.+++ .+|++.+-.+-.|..-+.
T Consensus 100 ~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~---k~Gvalnp~Tp~e~l~~~l~-~vD~VlvMsV~PGfgGQ~-- 173 (246)
T 3inp_A 100 ALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGI---QAGLALNPATGIDCLKYVES-NIDRVLIMSVNPGFGGQK-- 173 (246)
T ss_dssp HHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTS---EEEEEECTTCCSGGGTTTGG-GCSEEEEECSCTTC--CC--
T ss_pred HHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCC---eEEEEecCCCCHHHHHHHHh-cCCEEEEeeecCCCCCcc--
Confidence 4556666766432 23421 356777777765311 111111 122355555544 689988763334553210
Q ss_pred cccccccccccccccccccC------c-eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 422 LTNIEYMFFPLVGDMNSYLG------G-VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~------~-~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
++.....-+..+|+.++ . .++|| +...++.++.++|||++.+|.
T Consensus 174 ---fi~~~l~KI~~lr~~~~~~~~~~~I~VDGG-I~~~ti~~~~~aGAD~~V~GS 224 (246)
T 3inp_A 174 ---FIPAMLDKAKEISKWISSTDRDILLEIDGG-VNPYNIAEIAVCGVNAFVAGS 224 (246)
T ss_dssp ---CCTTHHHHHHHHHHHHHHHTSCCEEEEESS-CCTTTHHHHHTTTCCEEEESH
T ss_pred ---cchHHHHHHHHHHHHHHhcCCCeeEEEECC-cCHHHHHHHHHcCCCEEEEeh
Confidence 01111112233333321 1 46888 466666778899999999985
No 262
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=73.49 E-value=3.2 Score=41.39 Aligned_cols=71 Identities=14% Similarity=0.155 Sum_probs=43.0
Q ss_pred hhHHHHHHcC-CcEEEEccccccccccccccccccccccccccccccccCc---eeeccccCchhHHHHHHcCCcEEEEC
Q psy3862 393 GDVAKAMGAG-ADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGG---VVDGGCTSPGDVAKAMGAGADFVMLG 468 (671)
Q Consensus 393 ~~~~~l~~aG-~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~gG~v~t~~~a~~l~aGAd~V~vG 468 (671)
+.+..++++| +|++.+-.+-.|...+.. +.....-+..+|+.+++ .++|| +...++.+..++|||++.+|
T Consensus 128 ~~~~~~l~~g~~D~VlvmsV~pGf~gq~f-----~~~~l~ki~~lr~~~~~~~I~VdGG-I~~~ti~~~~~aGAd~~V~G 201 (227)
T 1tqx_A 128 QKLVPILDTNLINTVLVMTVEPGFGGQSF-----MHDMMGKVSFLRKKYKNLNIQVDGG-LNIETTEISASHGANIIVAG 201 (227)
T ss_dssp GGGHHHHTTTCCSEEEEESSCTTCSSCCC-----CGGGHHHHHHHHHHCTTCEEEEESS-CCHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHhhcCCcCEEEEeeeccCCCCccc-----chHHHHHHHHHHHhccCCeEEEECC-CCHHHHHHHHHcCCCEEEEe
Confidence 5667777776 999988744456652211 11111223334444423 46888 45556666789999999998
Q ss_pred c
Q psy3862 469 G 469 (671)
Q Consensus 469 ~ 469 (671)
.
T Consensus 202 s 202 (227)
T 1tqx_A 202 T 202 (227)
T ss_dssp H
T ss_pred H
Confidence 5
No 263
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=73.37 E-value=17 Score=38.65 Aligned_cols=22 Identities=23% Similarity=0.161 Sum_probs=18.2
Q ss_pred HHHHHHHHHcCCCEEEEcccCC
Q psy3862 224 GEMVEELILSGADVIKVGIGPG 245 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG~~~~ 245 (671)
.+.|+.+.++|.|||.+=.+-|
T Consensus 164 ~~AA~~A~~aGfDgVEih~a~G 185 (361)
T 3gka_A 164 RRGAENARAAGFDGVEVHGANG 185 (361)
T ss_dssp HHHHHHHHHTTCSEEEEECCTT
T ss_pred HHHHHHHHHcCCCEEEECCcCc
Confidence 4678888999999999987654
No 264
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=72.94 E-value=12 Score=36.15 Aligned_cols=26 Identities=15% Similarity=0.198 Sum_probs=21.4
Q ss_pred eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 443 VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 443 ~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
+..|| +...++.+++++||++|-|+.
T Consensus 148 iaiGG-I~~~nv~~~~~~Ga~gVav~s 173 (210)
T 3ceu_A 148 MALGG-INEDNLLEIKDFGFGGAVVLG 173 (210)
T ss_dssp EEESS-CCTTTHHHHHHTTCSEEEESH
T ss_pred EEECC-CCHHHHHHHHHhCCCEEEEhH
Confidence 44677 578888889999999998874
No 265
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=72.87 E-value=5.7 Score=37.26 Aligned_cols=87 Identities=17% Similarity=0.071 Sum_probs=49.7
Q ss_pred HHHHHHHHcCCeEEEc--cCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEcccccccccccccccc
Q psy3862 347 EMAKHLAKHGLFTTIH--KYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTN 424 (671)
Q Consensus 347 ~mA~~la~~Gglgvih--r~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~ 424 (671)
.|...+-+..|+-+++ .+.++|+..+.+.+. ++|++++-.+...|.....++++
T Consensus 36 ~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~------------------------~~diV~lS~~~~~~~~~~~~~i~ 91 (161)
T 2yxb_A 36 KVVARALRDAGFEVVYTGLRQTPEQVAMAAVQE------------------------DVDVIGVSILNGAHLHLMKRLMA 91 (161)
T ss_dssp HHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHT------------------------TCSEEEEEESSSCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhc------------------------CCCEEEEEeechhhHHHHHHHHH
Confidence 4555667778898887 578888888877643 34444443222222222222222
Q ss_pred ccccccc-cccccccccCceeeccccCchhHHHHHHcCCcEE
Q psy3862 425 IEYMFFP-LVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFV 465 (671)
Q Consensus 425 ~~~~~~~-~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V 465 (671)
.++..-+ .+ .+++||...+.+...+-..|+|.+
T Consensus 92 ~L~~~g~~~i--------~v~vGG~~~~~~~~~l~~~G~d~v 125 (161)
T 2yxb_A 92 KLRELGADDI--------PVVLGGTIPIPDLEPLRSLGIREI 125 (161)
T ss_dssp HHHHTTCTTS--------CEEEEECCCHHHHHHHHHTTCCEE
T ss_pred HHHhcCCCCC--------EEEEeCCCchhcHHHHHHCCCcEE
Confidence 2221100 00 156899877777666678999976
No 266
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=72.79 E-value=19 Score=38.36 Aligned_cols=22 Identities=18% Similarity=0.158 Sum_probs=18.2
Q ss_pred HHHHHHHHHcCCCEEEEcccCC
Q psy3862 224 GEMVEELILSGADVIKVGIGPG 245 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG~~~~ 245 (671)
.+.|+.+.++|.|||.+=.+.|
T Consensus 156 ~~AA~~a~~aGfDgVEih~a~G 177 (362)
T 4ab4_A 156 RSGAENAKAAGFDGVEIHGANG 177 (362)
T ss_dssp HHHHHHHHHTTCSEEEEECCTT
T ss_pred HHHHHHHHHcCCCEEEECCcCc
Confidence 4678888999999999987654
No 267
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=72.68 E-value=4.9 Score=41.74 Aligned_cols=67 Identities=16% Similarity=0.209 Sum_probs=48.5
Q ss_pred HHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 119 LAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 119 ~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
++.+.+.+++ ++|+|-+|.. .++.+.+.++.++..+|...+.+....+.+.++.+.++|||.|.+.+
T Consensus 207 lee~~~A~~a--GaD~I~ld~~--~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 207 LQEAVQAAEA--GADLVLLDNF--KPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHHHHHHHT--TCSEEEEESC--CHHHHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTTCCEEECTH
T ss_pred HHHHHHHHHc--CCCEEEECCC--CHHHHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCCCCEEEECh
Confidence 4556566666 7888888753 34555555665655688877776655699999999999999997744
No 268
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=72.48 E-value=15 Score=35.95 Aligned_cols=113 Identities=10% Similarity=0.077 Sum_probs=57.7
Q ss_pred HHHHhCCCceEEEeeccC-CCC-hHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCC--CceE--EE
Q psy3862 124 EILAALPEIEYICLDVAN-GYT-QTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP--GSVC--TT 197 (671)
Q Consensus 124 ~l~~a~~~~d~Ivld~a~-G~~-~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~--G~~~--~t 197 (671)
.+.+. +++.+++..+. -.+ ....++++..++.. ...+++ +.+.+..+++.+.|.++|-+..-- |+.. .+
T Consensus 77 ~~~~~--Gad~Vll~~ser~l~~~e~~~~~~~a~~~G-l~~iv~--v~~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~t 151 (219)
T 2h6r_A 77 AIKDC--GCKGTLINHSEKRMLLADIEAVINKCKNLG-LETIVC--TNNINTSKAVAALSPDCIAVEPPELIGTGIPVSK 151 (219)
T ss_dssp HHHHH--TCCEEEESBTTBCCBHHHHHHHHHHHHHHT-CEEEEE--ESSSHHHHHHTTTCCSEEEECCCC----------
T ss_pred HHHHc--CCCEEEECCccccCCHHHHHHHHHHHHHCC-CeEEEE--eCCchHHHHHHhCCCCEEEEEeccccccCCCCcc
Confidence 34444 88888885321 011 23333444333322 112222 333344566777899988665422 2221 11
Q ss_pred EecccCC-cchhhhhcc-ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 198 RLKNKTS-DFFLIQFYS-CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 198 ~v~~~~~-~~~~i~~i~-~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
...+... ...++..+. .+| ..|||-+.+.++.+.+.||||+-||
T Consensus 152 ~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVG 199 (219)
T 2h6r_A 152 ANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLA 199 (219)
T ss_dssp ----CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEES
T ss_pred CCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEc
Confidence 1011000 111122221 345 6999999999999999999999998
No 269
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=72.46 E-value=3.3 Score=45.53 Aligned_cols=28 Identities=14% Similarity=0.284 Sum_probs=23.2
Q ss_pred ccceeeecccChhhHHHHHHcCCcEEEEc
Q psy3862 381 IKHVADGGCTSPGDVAKAMGAGADFVMLG 409 (671)
Q Consensus 381 ~~~v~~~~~~~~~~~~~l~~aG~d~i~id 409 (671)
...++.+|..+++|+.++.++ +|.++|.
T Consensus 209 ~~vIaEsGI~t~edv~~~~~~-a~avLVG 236 (452)
T 1pii_A 209 VTVISESGINTYAQVRELSHF-ANGFLIG 236 (452)
T ss_dssp SEEEEESCCCCHHHHHHHTTT-CSEEEEC
T ss_pred CeEEEECCCCCHHHHHHHHHh-CCEEEEc
Confidence 345666777789999999999 9999997
No 270
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=72.23 E-value=4.2 Score=41.77 Aligned_cols=69 Identities=22% Similarity=0.291 Sum_probs=42.0
Q ss_pred HHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEE
Q psy3862 395 VAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFV 465 (671)
Q Consensus 395 ~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V 465 (671)
..++++.|||+|=|.|-+..-....+....++++..|.++.++++ ++.+-=--.-.++++ ++++|||+|
T Consensus 36 a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~--~v~iSIDT~~~~Va~~al~aGa~iI 105 (270)
T 4hb7_A 36 VKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGF--DVKISVDTFRSEVAEACLKLGVDMI 105 (270)
T ss_dssp HHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTS--SSEEEEECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcC--CCeEEEECCCHHHHHHHHHhcccee
Confidence 355688999999998654322223344445666677777777653 211111134456677 689999987
No 271
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=71.54 E-value=7.5 Score=40.45 Aligned_cols=66 Identities=24% Similarity=0.249 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 117 KDLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 117 ~d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
+.++.+++.+++ ++|.|-+|.. .+..+.+.++.+ .|...+.+....+.+.++++.++|||+|.+..
T Consensus 217 dtlde~~eAl~a--GaD~I~LDn~--~~~~l~~av~~i---~~~v~ieaSGGI~~~~i~~~a~tGVD~isvG~ 282 (298)
T 3gnn_A 217 ETLDQLRTALAH--GARSVLLDNF--TLDMMRDAVRVT---EGRAVLEVSGGVNFDTVRAIAETGVDRISIGA 282 (298)
T ss_dssp SSHHHHHHHHHT--TCEEEEEESC--CHHHHHHHHHHH---TTSEEEEEESSCSTTTHHHHHHTTCSEEECGG
T ss_pred CCHHHHHHHHHc--CCCEEEECCC--CHHHHHHHHHHh---CCCCeEEEEcCCCHHHHHHHHHcCCCEEEECC
Confidence 345667777777 7899998843 344444455443 56666666555789999999999999997754
No 272
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=71.27 E-value=14 Score=37.01 Aligned_cols=43 Identities=14% Similarity=0.078 Sum_probs=32.3
Q ss_pred HHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCC
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGG 276 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~ 276 (671)
..++.+++.|||.|-+-|-.|+.-. -+..-+.++.++|+++|.
T Consensus 92 ~e~~~Av~~GAdEID~vinig~~~~---------~v~~ei~~v~~a~~~~g~ 134 (234)
T 1n7k_A 92 VEAQTVLEAGATELDVVPHLSLGPE---------AVYREVSGIVKLAKSYGA 134 (234)
T ss_dssp HHHHHHHHHTCCEEEECCCGGGCHH---------HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEeccchHHHH---------HHHHHHHHHHHHHhhcCC
Confidence 4678899999999999998887543 456666777777776543
No 273
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=71.09 E-value=0.71 Score=47.26 Aligned_cols=117 Identities=20% Similarity=0.197 Sum_probs=64.4
Q ss_pred HHHHHHHHhCCCceEEEeecc---CCCChHHHHHHHHHHHh---CCCceE-EEEE--eccH----HHHHHHHHCCCcEEE
Q psy3862 120 AGLKEILAALPEIEYICLDVA---NGYTQTFVDFVRRIREM---YPKHVI-IAGN--VVTG----EMVEELILSGADVIK 186 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a---~G~~~~~~~~ik~lr~~---~P~~~l-i~g~--v~t~----e~a~~Li~AGaD~Iv 186 (671)
..+++.++...++--++++.. .|+...+.+-++.+++. ++...+ |--. ..+. ...+...++|||+|+
T Consensus 89 ~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVK 168 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIK 168 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEE
Confidence 345566666323323455544 45556666666666553 222222 2111 1223 355677889999999
Q ss_pred ECcCCCc-eEEEEecccCCcchh-hhh-----cc-ccC--CccccccHHHHHHHHHcCCC----------EEEEcc
Q psy3862 187 VGIGPGS-VCTTRLKNKTSDFFL-IQF-----YS-CIP--QAGNVVTGEMVEELILSGAD----------VIKVGI 242 (671)
Q Consensus 187 Vdga~G~-~~~t~v~~~~~~~~~-i~~-----i~-~~p--~aGnV~t~~~a~~li~aGAd----------gvkVG~ 242 (671)
..++-+. ..+-+ ++.+ .+. +. .++ ++|||-|.+++.+++++||+ ..|+|.
T Consensus 169 TSTGf~~~gAt~e------~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~~lG~~w~~~~~~RiGt 238 (260)
T 1p1x_A 169 TSTGKVAVNATPE------SARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGA 238 (260)
T ss_dssp CCCSCSSCCCCHH------HHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHHHHCTTSCSTTTBCEEE
T ss_pred eCCCCCCCCCCHH------HHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhhhccccccccCceEeec
Confidence 8764321 11111 0001 011 01 133 89999999999999999886 567773
No 274
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=71.05 E-value=4.4 Score=39.87 Aligned_cols=108 Identities=13% Similarity=0.115 Sum_probs=60.1
Q ss_pred HHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEe--cc-HHHHHHHHHC--CCcEEEECcCC-CceE
Q psy3862 122 LKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNV--VT-GEMVEELILS--GADVIKVGIGP-GSVC 195 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v--~t-~e~a~~Li~A--GaD~IvVdga~-G~~~ 195 (671)
++...++ +++.+++...... ..+.+.++.+++.. .+++-.+ .| .++.+.+.+. ++|.|-+++-+ |..
T Consensus 80 i~~~~~a--gad~v~vH~~~~~-~~~~~~~~~i~~~g---~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~- 152 (228)
T 1h1y_A 80 VEPLAKA--GASGFTFHIEVSR-DNWQELIQSIKAKG---MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFG- 152 (228)
T ss_dssp HHHHHHH--TCSEEEEEGGGCT-TTHHHHHHHHHHTT---CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCS-
T ss_pred HHHHHHc--CCCEEEECCCCcc-cHHHHHHHHHHHcC---CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCC-
Confidence 4555555 7787755432211 11245555554431 2222222 33 4667777776 99999997732 211
Q ss_pred EEEecccCC--cchhhhhc----cccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 196 TTRLKNKTS--DFFLIQFY----SCIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 196 ~t~v~~~~~--~~~~i~~i----~~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
++.++ .+..+..+ ..+| ++|||.. +.+..++++|||++=||
T Consensus 153 ----g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~ni~~~~~aGaD~vvvG 201 (228)
T 1h1y_A 153 ----GQKFMPEMMEKVRALRKKYPSLDIEVDGGLGP-STIDVAASAGANCIVAG 201 (228)
T ss_dssp ----SCCCCGGGHHHHHHHHHHCTTSEEEEESSCST-TTHHHHHHHTCCEEEES
T ss_pred ----cccCCHHHHHHHHHHHHhcCCCCEEEECCcCH-HHHHHHHHcCCCEEEEC
Confidence 01111 11111111 1345 6899987 88889999999999888
No 275
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=70.53 E-value=7.7 Score=40.73 Aligned_cols=65 Identities=25% Similarity=0.273 Sum_probs=45.5
Q ss_pred hHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 118 DLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 118 d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
.++.+.+.+++ ++|.|-+|.. .+..+.+.++.++ +...+.+....+.+.++.+.++|||+|.+..
T Consensus 240 tldea~eAl~a--GaD~I~LDn~--~~~~l~~av~~l~---~~v~ieaSGGIt~~~I~~~a~tGVD~isvGa 304 (320)
T 3paj_A 240 TLAELEEAISA--GADIIMLDNF--SLEMMREAVKINA---GRAALENSGNITLDNLKECAETGVDYISVGA 304 (320)
T ss_dssp SHHHHHHHHHT--TCSEEEEESC--CHHHHHHHHHHHT---TSSEEEEESSCCHHHHHHHHTTTCSEEECTH
T ss_pred CHHHHHHHHHc--CCCEEEECCC--CHHHHHHHHHHhC---CCCeEEEECCCCHHHHHHHHHcCCCEEEECc
Confidence 45667777777 7788888853 3444444444332 4566666666789999999999999997744
No 276
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=70.24 E-value=6.1 Score=42.20 Aligned_cols=26 Identities=38% Similarity=0.478 Sum_probs=18.8
Q ss_pred eeeccccCchhHH-HHHHcCCcEEEECc
Q psy3862 443 VVDGGCTSPGDVA-KAMGAGADFVMLGG 469 (671)
Q Consensus 443 ~i~gG~v~t~~~a-~~l~aGAd~V~vG~ 469 (671)
+..||+ .+++-+ +.+.+|||.|++|.
T Consensus 302 I~~GGI-~s~~da~~~l~~GAd~V~vgr 328 (367)
T 3zwt_A 302 IGVGGV-SSGQDALEKIRAGASLVQLYT 328 (367)
T ss_dssp EEESSC-CSHHHHHHHHHHTCSEEEESH
T ss_pred EEECCC-CCHHHHHHHHHcCCCEEEECH
Confidence 445665 555554 47899999999985
No 277
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=69.45 E-value=3.4 Score=41.15 Aligned_cols=109 Identities=19% Similarity=0.183 Sum_probs=60.3
Q ss_pred HHHHHHHcCCeEE-eecC--CCHHHHHHhhhcCcccccceE--EecCCChhhHHHHHHHHHhCCCceEEEeec-cCCC--
Q psy3862 72 MAKHLAKHGLFTT-IHKY--YTLEEWKAFAVQNPDVIKHVA--VSSGISAKDLAGLKEILAALPEIEYICLDV-ANGY-- 143 (671)
Q Consensus 72 lA~Ala~~gglgv-Ih~n--~~~Eeq~~~i~~~p~~~~~~~--v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~-a~G~-- 143 (671)
....++++|.=.+ +|.- ..+.+..+.+++.- ..++ +++.++. ++++.++. .+|.+.+-. .+|.
T Consensus 79 ~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G---~k~gval~p~t~~---e~l~~~l~---~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 79 WVKPMAVAGANQYTFHLEATENPGALIKDIRENG---MKVGLAIKPGTSV---EYLAPWAN---QIDMALVMTVEPGFGG 149 (228)
T ss_dssp GHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTT---CEEEEEECTTSCG---GGTGGGGG---GCSEEEEESSCTTTCS
T ss_pred HHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcC---CCEEEEEcCCCCH---HHHHHHhc---cCCeEEEeeecCCCCC
Confidence 3445566665444 7753 22334444444321 1222 3333433 34444433 245553322 2222
Q ss_pred ---ChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 144 ---TQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 144 ---~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
....++.++++|+.++...+.+....+.+.++.+.++|||++++++
T Consensus 150 q~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvGs 198 (228)
T 3ovp_A 150 QKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGS 198 (228)
T ss_dssp CCCCGGGHHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEESH
T ss_pred cccCHHHHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEeH
Confidence 2456778888888776655544444468999999999999999854
No 278
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=69.32 E-value=29 Score=34.93 Aligned_cols=77 Identities=13% Similarity=-0.069 Sum_probs=46.5
Q ss_pred HHHHHHHHHCCCcEEEE---CcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEcc
Q psy3862 171 GEMVEELILSGADVIKV---GIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVGI 242 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvV---dga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG~ 242 (671)
.+.|+...+.|+|-+.+ |+ .+..++..+. .+| ++|||-+- .++.++ +|||-|-+|
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~--------------~n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l-~Ga~~Viig- 103 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGP--------------NNDDAAREALQESPQFLQVGGGINDT-NCLEWL-KWASKVIVT- 103 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESS--------------SCHHHHHHHHHHSTTTSEEESSCCTT-THHHHT-TTCSCEEEC-
T ss_pred HHHHHHHHHcCCCEEEEEeCCC--------------CCHHHHHHHHhcCCceEEEeCCCCHH-HHHHHh-cCCCEEEEC-
Confidence 47788889999996644 43 1222222221 245 69999876 888899 999977655
Q ss_pred cCCCccccceecccCcchhhhHHHHHHHh
Q psy3862 243 GPGSVCTTRLKTGVGYPQFSAVLECADAA 271 (671)
Q Consensus 243 ~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~ 271 (671)
|-.+.-.|++...-+.+.++.-
T Consensus 104 -------s~a~~~~g~~~p~~~~~~~~~~ 125 (260)
T 2agk_A 104 -------SWLFTKEGHFQLKRLERLTELC 125 (260)
T ss_dssp -------GGGBCTTCCBCHHHHHHHHHHH
T ss_pred -------cHHHhhcCCCCHHHHHHHHHHh
Confidence 2222211344445666666544
No 279
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=69.10 E-value=26 Score=37.35 Aligned_cols=22 Identities=18% Similarity=0.185 Sum_probs=18.2
Q ss_pred HHHHHHHHHcCCCEEEEcccCC
Q psy3862 224 GEMVEELILSGADVIKVGIGPG 245 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG~~~~ 245 (671)
.+.|+.+.++|.|||.+-.+.|
T Consensus 170 ~~AA~~a~~aGfDgVEih~a~G 191 (376)
T 1icp_A 170 RVAARNAIEAGFDGVEIHGAHG 191 (376)
T ss_dssp HHHHHHHHHTTCSEEEEEECTT
T ss_pred HHHHHHHHHcCCCEEEEcCccc
Confidence 4678888999999999987654
No 280
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=68.99 E-value=1.9 Score=43.91 Aligned_cols=55 Identities=27% Similarity=0.254 Sum_probs=37.0
Q ss_pred HHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---cc-C--Cccccc--cHHHHHHHH----HcCCCEEEEc
Q psy3862 174 VEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CI-P--QAGNVV--TGEMVEELI----LSGADVIKVG 241 (671)
Q Consensus 174 a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~-p--~aGnV~--t~~~a~~li----~aGAdgvkVG 241 (671)
++...++|||+|.+... + ++..+..+. .. | +.||+. |.+.+++.+ ++||+|+-+|
T Consensus 165 ~~~a~~~GAD~vkt~~~-~------------~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvg 231 (263)
T 1w8s_A 165 ARIALELGADAMKIKYT-G------------DPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVG 231 (263)
T ss_dssp HHHHHHHTCSEEEEECC-S------------SHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHcCCCEEEEcCC-C------------CHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 46678899999987532 1 111111111 22 6 799999 888777776 9999999777
No 281
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=68.85 E-value=5.7 Score=41.04 Aligned_cols=57 Identities=28% Similarity=0.383 Sum_probs=39.9
Q ss_pred CceEEEeeccCCCChHHHHHHHHHHHhCC-CceE-EEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 131 EIEYICLDVANGYTQTFVDFVRRIREMYP-KHVI-IAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 131 ~~d~Ivld~a~G~~~~~~~~ik~lr~~~P-~~~l-i~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
+...+-+|.+. .....+.++++++..+ ...+ ++|.|.+.++++.++++|||.|++.+
T Consensus 199 G~~lV~LD~~~--~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGS 257 (286)
T 3vk5_A 199 GFHMVYLYSRN--EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAG 257 (286)
T ss_dssp TCSEEEEECSS--SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESG
T ss_pred CCCEEEEcCCC--CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECc
Confidence 45677777543 1222466777766552 3444 55578999999999999999999865
No 282
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=68.60 E-value=3.2 Score=41.52 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=63.4
Q ss_pred HHHHHHHHhCCCceE--EEeecc---CCCChHHHHHHHHHHHhCCC-ceE-EEEE-eccH----HHHHHHHHCCCcEEEE
Q psy3862 120 AGLKEILAALPEIEY--ICLDVA---NGYTQTFVDFVRRIREMYPK-HVI-IAGN-VVTG----EMVEELILSGADVIKV 187 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~--Ivld~a---~G~~~~~~~~ik~lr~~~P~-~~l-i~g~-v~t~----e~a~~Li~AGaD~IvV 187 (671)
..+++ +.. +++- ++++.. .|+...+.+-++.+++..+. ..+ |--. -.+. ...+...++|||+|+.
T Consensus 71 ~E~~~-i~~--GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKT 147 (226)
T 1vcv_A 71 ALVSR-LAE--VADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKS 147 (226)
T ss_dssp HHHHH-HTT--TCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHH-HHC--CCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 34555 665 4443 455544 34445555566666655432 222 2211 1232 3566778899999998
Q ss_pred CcCCC-----------ceEEEEecccCCcchhh-hh---cc-ccC--CccccccHHHHHHHHHc---CCC--EEEEccc
Q psy3862 188 GIGPG-----------SVCTTRLKNKTSDFFLI-QF---YS-CIP--QAGNVVTGEMVEELILS---GAD--VIKVGIG 243 (671)
Q Consensus 188 dga~G-----------~~~~t~v~~~~~~~~~i-~~---i~-~~p--~aGnV~t~~~a~~li~a---GAd--gvkVG~~ 243 (671)
.++-+ ...+- ++..++ +. +. .++ ++|||-|.+++.+++++ ||+ -+|+|..
T Consensus 148 STGf~~~~~~~~~~~~~gAt~------~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 148 STGFAEEAYAARQGNPVHSTP------ERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp CCSCCCHHHHHHTTCCSSCCH------HHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred CCCCCccccccccCCCCCCCH------HHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecC
Confidence 76432 11100 011110 11 11 133 79999999999999999 998 6677743
No 283
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=68.14 E-value=73 Score=35.62 Aligned_cols=104 Identities=21% Similarity=0.214 Sum_probs=61.2
Q ss_pred HHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHH---HhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcCCCceE
Q psy3862 119 LAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIR---EMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVC 195 (671)
Q Consensus 119 ~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr---~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~ 195 (671)
.+.+++++.. +++.+.+..-+.....+.+..++++ +.|- ..++. | ++.+.+.+.|+|-|=+....-
T Consensus 28 ~~~ve~al~~--Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~-v~liI-N----D~~dlA~~~gAdGVHLgq~dl--- 96 (540)
T 3nl6_A 28 YGQVEAGLQN--GVTLVQIREKDADTKFFIEEALQIKELCHAHN-VPLII-N----DRIDVAMAIGADGIHVGQDDM--- 96 (540)
T ss_dssp HHHHHHHHHT--TCSEEEECCSSSCTTHHHHHHHHHHHHHHHTT-CCEEE-C----SCSHHHHHTTCSEEEECTTSS---
T ss_pred HHHHHHHHHC--CCCEEEEecCCCCHHHHHHHHHHHHHHHHhcC-CEEEE-e----CcHHHHHHcCCCEEEEChhhc---
Confidence 3677778887 7888888766655566666666654 3342 23333 2 355566789999884422111
Q ss_pred EEEecccCCcchhhhhcc-ccCCccccccHHHHHHHHHcC---CCEEEEc
Q psy3862 196 TTRLKNKTSDFFLIQFYS-CIPQAGNVVTGEMVEELILSG---ADVIKVG 241 (671)
Q Consensus 196 ~t~v~~~~~~~~~i~~i~-~~p~aGnV~t~~~a~~li~aG---AdgvkVG 241 (671)
+.-...+... ...++--+-|.+.++.+.+.| ||-|-+|
T Consensus 97 --------~~~~ar~~lg~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~G 138 (540)
T 3nl6_A 97 --------PIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVG 138 (540)
T ss_dssp --------CHHHHHHHHCTTSEEEEEECSHHHHHHHHHTCC--CCEEEES
T ss_pred --------CHHHHHHHhCCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEc
Confidence 0000000000 111455566899999999999 9987654
No 284
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=68.10 E-value=4.5 Score=44.02 Aligned_cols=27 Identities=30% Similarity=0.338 Sum_probs=19.5
Q ss_pred eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 443 VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 443 ~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
+..||+....++.+.+.+|||.|+||.
T Consensus 349 Ig~GGI~s~eDa~e~l~aGAd~VqIgr 375 (415)
T 3i65_A 349 IASGGIFSGLDALEKIEAGASVCQLYS 375 (415)
T ss_dssp EECSSCCSHHHHHHHHHHTEEEEEESH
T ss_pred EEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 456775444445557899999999985
No 285
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=67.88 E-value=6.9 Score=43.99 Aligned_cols=195 Identities=15% Similarity=0.101 Sum_probs=105.9
Q ss_pred CceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCC---CcEEEECcCCCceEEEEecccC--Cc
Q psy3862 131 EIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSG---ADVIKVGIGPGSVCTTRLKNKT--SD 205 (671)
Q Consensus 131 ~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AG---aD~IvVdga~G~~~~t~v~~~~--~~ 205 (671)
+++.+++..... + ++..|+..+...+++..+.+.+.++.+.+.| +|+|.+.- .-.|..|+.. +.
T Consensus 85 gAdGVHLgq~dl-~------~~~ar~~lg~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gp----vf~T~tK~~~~~~~ 153 (540)
T 3nl6_A 85 GADGIHVGQDDM-P------IPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGT----LFPTLTKKNPKKAP 153 (540)
T ss_dssp TCSEEEECTTSS-C------HHHHHHHHCTTSEEEEEECSHHHHHHHHHTCC--CCEEEESC----CSCCCCCC----CC
T ss_pred CCCEEEEChhhc-C------HHHHHHHhCCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEcC----CCCCCCCCCcCCCC
Confidence 567777753221 1 2223333333456777788999999999999 99998732 1011111111 11
Q ss_pred --ch----hhhhc-----cccC--CccccccHHHHHHHHH--------cCCCEEEEcccCCCccccceecccCcchhhhH
Q psy3862 206 --FF----LIQFY-----SCIP--QAGNVVTGEMVEELIL--------SGADVIKVGIGPGSVCTTRLKTGVGYPQFSAV 264 (671)
Q Consensus 206 --~~----~i~~i-----~~~p--~aGnV~t~~~a~~li~--------aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~ 264 (671)
+. +.+.+ ..+| +-||| +.+.+..+++ +|||||=|+ +-++....|.. ++
T Consensus 154 ~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g~~~GadgvAVv---------saI~~a~dp~~-a~ 222 (540)
T 3nl6_A 154 MGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSSNGKRSLDGICVV---------SDIIASLDAAK-ST 222 (540)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCTTSSCBCSCEEES---------HHHHTCTTHHH-HH
T ss_pred CCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhcccccccCceEEEEe---------HHHhcCCCHHH-HH
Confidence 11 11221 1356 78999 8888999997 889999776 12233333422 11
Q ss_pred HHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCC
Q psy3862 265 LECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG 344 (671)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~ 344 (671)
.+..+..+ ...+-|.+. +++.+..+...-++..-+ .+.+..-|+|-.-.-.|+
T Consensus 223 ~~l~~~~~-------------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~-----~~vr~~~PLvh~iTN~V~ 275 (540)
T 3nl6_A 223 KILRGLID-------------------KTDYKFVNI---GLSTKNSLTTTDEIQSII-----SNTLKARPLVQHITNKVH 275 (540)
T ss_dssp HHHHHHHH-------------------CCBCCCSSS---BCCCCCSCCCHHHHHHHH-----HHHHHHCCEEEEECCHHH
T ss_pred HHHHHHHH-------------------hCCCccccc---ccccccchhHHHHHHHHH-----HHHHhcCCeEEEccccch
Confidence 11111111 112222111 111111111111111111 134456799999889999
Q ss_pred CHHHHHHHHHcCCeEEEccCCCHHHHHHHHhc
Q psy3862 345 TFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQ 376 (671)
Q Consensus 345 ~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~ 376 (671)
-...|..+=-.|+--++-.+ +||..++++.
T Consensus 276 ~n~~AN~~La~GasPiM~~~--~~E~~e~~~~ 305 (540)
T 3nl6_A 276 QNFGANVTLALGSSPIMSEI--QSEVNDLAAI 305 (540)
T ss_dssp HHHHHHHHHHTTSEEECCCC--HHHHHHHTTS
T ss_pred HHHHHHHHHHcCCChhhcCC--HHHHHHHHhc
Confidence 99999999999998888644 7787777653
No 286
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=67.84 E-value=30 Score=36.86 Aligned_cols=22 Identities=14% Similarity=0.214 Sum_probs=17.6
Q ss_pred HHHHHHHHHcCCCEEEEcccCC
Q psy3862 224 GEMVEELILSGADVIKVGIGPG 245 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG~~~~ 245 (671)
.+.|+.+.++|+|||.+=.+.|
T Consensus 169 ~~aA~~a~~aGfDgVEIh~a~G 190 (377)
T 2r14_A 169 RQAAQRAKRAGFDMVEVHAANA 190 (377)
T ss_dssp HHHHHHHHHHTCSEEEEEECTT
T ss_pred HHHHHHHHHcCCCEEEEcCccc
Confidence 4677788899999999976644
No 287
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=67.54 E-value=5 Score=38.99 Aligned_cols=77 Identities=12% Similarity=-0.111 Sum_probs=45.7
Q ss_pred eEEEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc-----ccC--CccccccHHHHHHHHHcC
Q psy3862 162 VIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS-----CIP--QAGNVVTGEMVEELILSG 234 (671)
Q Consensus 162 ~li~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~-----~~p--~aGnV~t~~~a~~li~aG 234 (671)
.+++..+.+.+.++.+. .|+|+|.++.---+.+-..... ...+..+..+. .+| +.|||. .+.+..++++|
T Consensus 89 ~~ig~s~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~-~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~G 165 (210)
T 3ceu_A 89 GHVSCSCHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYS-TYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFG 165 (210)
T ss_dssp SEEEEEECSHHHHHTTG-GGSSEEEECCCC---------C-CCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTT
T ss_pred CEEEEecCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCC-CCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhC
Confidence 35556677888887776 9999998754110000000000 00112222221 346 689997 88899999999
Q ss_pred CCEEEEc
Q psy3862 235 ADVIKVG 241 (671)
Q Consensus 235 AdgvkVG 241 (671)
|+||=|+
T Consensus 166 a~gVav~ 172 (210)
T 3ceu_A 166 FGGAVVL 172 (210)
T ss_dssp CSEEEES
T ss_pred CCEEEEh
Confidence 9999887
No 288
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=66.90 E-value=43 Score=32.73 Aligned_cols=45 Identities=29% Similarity=0.391 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 145 QTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 145 ~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
....+.++++++....-..+.|.+.+.+.++.+.++|||.+++.+
T Consensus 177 ~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGs 221 (248)
T 1geq_A 177 KTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGS 221 (248)
T ss_dssp HHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred hhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEcH
Confidence 345677888876542223444566777999999999999998843
No 289
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=66.69 E-value=12 Score=38.75 Aligned_cols=49 Identities=18% Similarity=0.065 Sum_probs=37.5
Q ss_pred HHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchh
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIIS 280 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~ 280 (671)
..++.++++|||+|+|=+-.|+--.. .-|+.-+.++.++|+++|.+++.
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~-------~~~~~~i~~v~~~~~~~G~p~lv 160 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDA-------QQRLNMVKEFNELCHSNGLLSII 160 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCH-------HHHHHHHHHHHHHHHTTTCEEEE
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccH-------HHHHHHHHHHHHHHHHcCCcEEE
Confidence 34678899999999976555433211 67889999999999999988766
No 290
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=65.41 E-value=3.8 Score=42.37 Aligned_cols=65 Identities=25% Similarity=0.331 Sum_probs=40.2
Q ss_pred ChhhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 391 SPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 391 ~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
+.+++.+.+++|+|+|.+|-....-.+ +. ++.++..++-...|| +...++.....+|+|+|-||.
T Consensus 205 t~eea~eA~~aGaD~I~ld~~~~~~~k---~a----------v~~v~~~ipi~AsGG-It~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 205 SLEELEEALEAGADLILLDNFPLEALR---EA----------VRRVGGRVPLEASGN-MTLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp SHHHHHHHHHHTCSEEEEESCCHHHHH---HH----------HHHHTTSSCEEEESS-CCHHHHHHHHHHTCSEEECTH
T ss_pred CHHHHHHHHHcCCCEEEECCCCHHHHH---HH----------HHHhCCCCeEEEEcC-CCHHHHHHHHHcCCCEEEEcH
Confidence 467777778999999999932111111 11 111111122234566 577777778899999999874
No 291
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=65.25 E-value=15 Score=39.94 Aligned_cols=70 Identities=14% Similarity=0.179 Sum_probs=43.8
Q ss_pred HHHHHHHHH-CCCcEEEECcCCCce--EEEEecccCCcchhhhhcc-----ccC--CccccccHHHHHHHHHcCCCEEEE
Q psy3862 171 GEMVEELIL-SGADVIKVGIGPGSV--CTTRLKNKTSDFFLIQFYS-----CIP--QAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 171 ~e~a~~Li~-AGaD~IvVdga~G~~--~~t~v~~~~~~~~~i~~i~-----~~p--~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
.+.++.|.+ +|+|+|.+-...... ............+.++.++ .+| ..|+|-|.+.+..+++. ||.|-+
T Consensus 267 ~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVai 345 (419)
T 3l5a_A 267 NQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGM 345 (419)
T ss_dssp HHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEE
T ss_pred HHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHH
Confidence 466888999 999999886533200 0000000001122233332 357 68999999999999999 999966
Q ss_pred c
Q psy3862 241 G 241 (671)
Q Consensus 241 G 241 (671)
|
T Consensus 346 G 346 (419)
T 3l5a_A 346 S 346 (419)
T ss_dssp S
T ss_pred H
Confidence 6
No 292
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=64.92 E-value=19 Score=36.35 Aligned_cols=42 Identities=21% Similarity=0.296 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEc
Q psy3862 367 LEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLG 409 (671)
Q Consensus 367 ~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id 409 (671)
++.-.+.+...|+-...++.+|..+++|+.++.++ +|.++|.
T Consensus 189 ~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG 230 (251)
T 1i4n_A 189 KNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVG 230 (251)
T ss_dssp TTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEEC
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEc
Confidence 34444444555544445666666679999999999 9999986
No 293
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=63.55 E-value=1.4 Score=45.53 Aligned_cols=64 Identities=20% Similarity=0.205 Sum_probs=40.5
Q ss_pred HHHHHHHCCCcEEEECcCCCc-eEEEEecccCCcchh-hhhc----------c-ccC--CccccccHHHHHHHHHcCCC-
Q psy3862 173 MVEELILSGADVIKVGIGPGS-VCTTRLKNKTSDFFL-IQFY----------S-CIP--QAGNVVTGEMVEELILSGAD- 236 (671)
Q Consensus 173 ~a~~Li~AGaD~IvVdga~G~-~~~t~v~~~~~~~~~-i~~i----------~-~~p--~aGnV~t~~~a~~li~aGAd- 236 (671)
..+...++|||+|+..++-+. ..+- ++..+ .+.+ . .++ ++|||-|.+++.+++++||+
T Consensus 177 A~~ia~eaGADfVKTSTGf~~~gAT~------edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~~ 250 (281)
T 2a4a_A 177 TTLAVLNGNADFIKTSTGKVQINATP------SSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARRF 250 (281)
T ss_dssp HHHHHHTTTCSEEECCCSCSSCCCCH------HHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEeCCCCCCCCCCH------HHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhhh
Confidence 456778899999998864321 1100 00000 0111 1 123 79999999999999999886
Q ss_pred ---------EEEEcc
Q psy3862 237 ---------VIKVGI 242 (671)
Q Consensus 237 ---------gvkVG~ 242 (671)
..|+|.
T Consensus 251 lG~~w~~~~~~RiGt 265 (281)
T 2a4a_A 251 LSSLACHPDNFRIGS 265 (281)
T ss_dssp TC------CCEEEEE
T ss_pred ccccccccCceEEec
Confidence 568883
No 294
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=63.49 E-value=23 Score=40.85 Aligned_cols=110 Identities=15% Similarity=0.204 Sum_probs=63.2
Q ss_pred CceEEEeeccCCCC------------------------hHHHHHHHHHHHh----CCCceEEEEEe------cc-----H
Q psy3862 131 EIEYICLDVANGYT------------------------QTFVDFVRRIREM----YPKHVIIAGNV------VT-----G 171 (671)
Q Consensus 131 ~~d~Ivld~a~G~~------------------------~~~~~~ik~lr~~----~P~~~li~g~v------~t-----~ 171 (671)
+.|.|-++.+||+. +-..+.++.+|+. +|...++...- .+ .
T Consensus 162 GfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~ 241 (729)
T 1o94_A 162 GFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQ 241 (729)
T ss_dssp TCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHH
T ss_pred CCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHH
Confidence 77888888888651 1244556666653 45555665431 11 2
Q ss_pred HHHHHHHHCCCcEEEECcCCCc-eEEEEecccC-C---cchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEEE
Q psy3862 172 EMVEELILSGADVIKVGIGPGS-VCTTRLKNKT-S---DFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIKV 240 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~-~~~t~v~~~~-~---~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-AdgvkV 240 (671)
+-++.|. .|+|+|.+..++.. .........+ + ..+.+..++ .+| ..|++.|.+.+..+++.| ||.|-+
T Consensus 242 ~~~~~l~-~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~ 320 (729)
T 1o94_A 242 KFVEMAD-SLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGC 320 (729)
T ss_dssp HHHHHHG-GGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEE
T ss_pred HHHHHHH-hhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEe
Confidence 3455544 48999987554310 0000011111 1 122222332 356 699999999999999998 999988
Q ss_pred c
Q psy3862 241 G 241 (671)
Q Consensus 241 G 241 (671)
|
T Consensus 321 g 321 (729)
T 1o94_A 321 A 321 (729)
T ss_dssp S
T ss_pred C
Confidence 7
No 295
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=63.36 E-value=15 Score=38.26 Aligned_cols=77 Identities=10% Similarity=0.158 Sum_probs=58.9
Q ss_pred CCCHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEcccccccccccccc
Q psy3862 343 VGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGEL 422 (671)
Q Consensus 343 V~~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~ 422 (671)
|-+++.+.+-.+.|.=.++=-|+++|+..+.++..+. --.+.+||+++++.+....+.|||+|.+. +-=|+-..+++
T Consensus 214 v~tl~e~~eAl~aGaDiImLDn~s~~~l~~av~~~~~-~v~leaSGGIt~~~i~~~A~tGVD~IsvG--althsa~~lDi 290 (300)
T 3l0g_A 214 CDNISQVEESLSNNVDMILLDNMSISEIKKAVDIVNG-KSVLEVSGCVNIRNVRNIALTGVDYISIG--CITNSFQNKDI 290 (300)
T ss_dssp ESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHTT-SSEEEEESSCCTTTHHHHHTTTCSEEECG--GGTSSCCCCCE
T ss_pred ECCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHhhcC-ceEEEEECCCCHHHHHHHHHcCCCEEEeC--ccccCCCccee
Confidence 4457888888888888888899999998888765432 12467899999999999999999999986 33455444544
No 296
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=62.58 E-value=9.7 Score=44.47 Aligned_cols=91 Identities=22% Similarity=0.076 Sum_probs=50.2
Q ss_pred HHHHHHHcCCeEEEc--cCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccccccccccccccc
Q psy3862 348 MAKHLAKHGLFTTIH--KYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNI 425 (671)
Q Consensus 348 mA~~la~~Gglgvih--r~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~ 425 (671)
+...|-+.+||-|++ .+.++|+.++.+. +.++|++++-+....|.....++++.
T Consensus 623 iVa~~l~~~GfeVi~lG~~v~~eeiv~aA~------------------------e~~adiVglSsl~~~~~~~~~~vi~~ 678 (762)
T 2xij_A 623 VIATGFADLGFDVDIGPLFQTPREVAQQAV------------------------DADVHAVGVSTLAAGHKTLVPELIKE 678 (762)
T ss_dssp HHHHHHHHTTCEEEECCTTCCHHHHHHHHH------------------------HTTCSEEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEeeCCCCCCHHHHHHHHH------------------------HcCCCEEEEeeecHHHHHHHHHHHHH
Confidence 555555667777776 4566666666553 45566666643334554433333333
Q ss_pred cccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccC
Q psy3862 426 EYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAG 473 (671)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G 473 (671)
++..-+ +. -.+++||.+...+...+...|+|.+ .+||
T Consensus 679 Lr~~G~-----~d--v~VivGG~~P~~d~~~l~~~GaD~~----f~pg 715 (762)
T 2xij_A 679 LNSLGR-----PD--ILVMCGGVIPPQDYEFLFEVGVSNV----FGPG 715 (762)
T ss_dssp HHHTTC-----TT--SEEEEEESCCGGGHHHHHHHTCCEE----ECTT
T ss_pred HHhcCC-----CC--CEEEEeCCCCcccHHHHHhCCCCEE----eCCC
Confidence 332211 00 0145788544445666779999988 4666
No 297
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=61.76 E-value=1.2e+02 Score=29.38 Aligned_cols=155 Identities=21% Similarity=0.196 Sum_probs=77.7
Q ss_pred ccHHHHHHHHHcC--CeEEee-----cCCCHHHHHHhhhcCcccccceEEecCCChhhHHHHHHHHHhCCCceEEEeecc
Q psy3862 68 GTFEMAKHLAKHG--LFTTIH-----KYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVA 140 (671)
Q Consensus 68 t~~~lA~Ala~~g--glgvIh-----~n~~~Eeq~~~i~~~p~~~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a 140 (671)
+..+=|.++++.| .+|++. |..++|+..+.....|.....+++...-+ .+.+.+++... +.+++-+
T Consensus 10 t~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~---~~~i~~~~~~~-~ld~vQL--- 82 (205)
T 1nsj_A 10 TNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNEE---PEKILDVASYV-QLNAVQL--- 82 (205)
T ss_dssp CSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCC---HHHHHHHHHHH-TCSEEEE---
T ss_pred CcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCC---HHHHHHHHHhh-CCCEEEE---
Confidence 3444444455555 678874 34666554444433343344555543333 44444444431 4566665
Q ss_pred CCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECcC----CCceEEEEecccCCcchhhhhc--cc
Q psy3862 141 NGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIG----PGSVCTTRLKNKTSDFFLIQFY--SC 214 (671)
Q Consensus 141 ~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdga----~G~~~~t~v~~~~~~~~~i~~i--~~ 214 (671)
||.- -.+.++.+++..| .+-+-.+.+.+....+.+..+|.+.+|+. +|+..+ + +..+++-+ ..
T Consensus 83 HG~e--~~~~~~~l~~~~~--vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~~------f-dw~~l~~~~~~~ 151 (205)
T 1nsj_A 83 HGEE--PIELCRKIAERIL--VIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKT------F-DWSLILPYRDRF 151 (205)
T ss_dssp CSCC--CHHHHHHHHTTSE--EEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCSC------C-CGGGTGGGGGGS
T ss_pred CCCC--CHHHHHHHhcCCC--EEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCCc------c-CHHHHHhhhcCC
Confidence 3431 1244555432222 12222455555555554455999999984 354311 0 11111111 12
Q ss_pred cC--CccccccHHHHHHHH-HcCCCEEEEc
Q psy3862 215 IP--QAGNVVTGEMVEELI-LSGADVIKVG 241 (671)
Q Consensus 215 ~p--~aGnV~t~~~a~~li-~aGAdgvkVG 241 (671)
.| .|||+. .+.+..++ ..++.||=|.
T Consensus 152 ~p~~LAGGL~-peNV~~ai~~~~p~gVDvs 180 (205)
T 1nsj_A 152 RYLVLSGGLN-PENVRSAIDVVRPFAVDVS 180 (205)
T ss_dssp SCEEEESSCC-TTTHHHHHHHHCCSEEEES
T ss_pred CcEEEECCCC-HHHHHHHHHhcCCCEEEEC
Confidence 35 799994 45554544 4799999776
No 298
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=61.54 E-value=4.2 Score=40.72 Aligned_cols=51 Identities=20% Similarity=0.249 Sum_probs=36.2
Q ss_pred CCCcEEEECcCCCceEEEEecccCCcchhhhhcc----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 180 SGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 180 AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.|.++|-+++ .|.. .+..++..+. .+| ++|||-|.++++.++ .|||+|-||
T Consensus 152 ~g~~~VYld~-sG~~---------~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVG 208 (228)
T 3vzx_A 152 LQLPIFYLEY-SGVL---------GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVG 208 (228)
T ss_dssp TTCSEEEEEC-TTSC---------CCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEEC
T ss_pred cCCCEEEecC-CCCc---------CCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEEC
Confidence 4689998888 4431 1222222221 245 799999999999998 799999999
No 299
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=61.32 E-value=8.1 Score=38.43 Aligned_cols=69 Identities=22% Similarity=0.247 Sum_probs=43.6
Q ss_pred HHHHHHHHhCCCceEE---EeeccCC---CChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 120 AGLKEILAALPEIEYI---CLDVANG---YTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~I---vld~a~G---~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
+.++.++... .+|.+ .++..++ ......+.++++|+..+...+.+-...+.+.+..+.++|||++++.+
T Consensus 128 ~~~~~~l~~g-~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aGAd~~V~Gs 202 (227)
T 1tqx_A 128 QKLVPILDTN-LINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGANIIVAGT 202 (227)
T ss_dssp GGGHHHHTTT-CCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHTCCEEEESH
T ss_pred HHHHHHhhcC-CcCEEEEeeeccCCCCcccchHHHHHHHHHHHhccCCeEEEECCCCHHHHHHHHHcCCCEEEEeH
Confidence 3455555420 25665 4443332 23556778888877665444544444568999999999999999854
No 300
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=61.27 E-value=28 Score=36.53 Aligned_cols=72 Identities=22% Similarity=0.291 Sum_probs=45.5
Q ss_pred CChhhHHH-HHHHHHhCCCceEEEeeccCC-------CChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCC-CcE
Q psy3862 114 ISAKDLAG-LKEILAALPEIEYICLDVANG-------YTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSG-ADV 184 (671)
Q Consensus 114 ~~~~d~~r-l~~l~~a~~~~d~Ivld~a~G-------~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AG-aD~ 184 (671)
.+.++... ++.+-++ +++++.+....- ......+.++++++......+.+|.+.+.+.++++++.| +|.
T Consensus 226 ~~~~~~~~la~~L~~~--Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~ 303 (340)
T 3gr7_A 226 LTAKDYVPYAKRMKEQ--GVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADL 303 (340)
T ss_dssp CCGGGHHHHHHHHHHT--TCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSE
T ss_pred CCHHHHHHHHHHHHHc--CCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeE
Confidence 44555544 4444444 788887753110 112245667777766643345556778999999999999 999
Q ss_pred EEE
Q psy3862 185 IKV 187 (671)
Q Consensus 185 IvV 187 (671)
|.+
T Consensus 304 V~i 306 (340)
T 3gr7_A 304 VFL 306 (340)
T ss_dssp EEE
T ss_pred EEe
Confidence 966
No 301
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=60.39 E-value=7.3 Score=45.28 Aligned_cols=91 Identities=18% Similarity=0.026 Sum_probs=50.4
Q ss_pred HHHHHHHcCCeEEEc--cCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccccccccccccccc
Q psy3862 348 MAKHLAKHGLFTTIH--KYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNI 425 (671)
Q Consensus 348 mA~~la~~Gglgvih--r~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~ 425 (671)
+...|-+.+|+-|++ .+.++|+.++.+ ++.++|++++-+....|.....++++.
T Consensus 615 iVa~~l~~~GfeVi~lG~~v~~eeiv~aA------------------------~e~~adiVglSsl~~~~~~~~~~vi~~ 670 (727)
T 1req_A 615 VIATAYADLGFDVDVGPLFQTPEETARQA------------------------VEADVHVVGVSSLAGGHLTLVPALRKE 670 (727)
T ss_dssp HHHHHHHHHTCEEEECCTTBCHHHHHHHH------------------------HHTTCSEEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEeCCCCCCHHHHHHHH------------------------HHcCCCEEEEeeecHhHHHHHHHHHHH
Confidence 444555556666655 345555555544 455667777654334554444444333
Q ss_pred cccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECccccC
Q psy3862 426 EYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAG 473 (671)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~~g~G 473 (671)
++..-+ +. -.+++||.+.+.+...+...|+|.+ .++|
T Consensus 671 L~~~G~-----~~--i~VivGG~~p~~d~~~l~~~GaD~~----f~~g 707 (727)
T 1req_A 671 LDKLGR-----PD--ILITVGGVIPEQDFDELRKDGAVEI----YTPG 707 (727)
T ss_dssp HHHTTC-----TT--SEEEEEESCCGGGHHHHHHTTEEEE----ECTT
T ss_pred HHhcCC-----CC--CEEEEcCCCccccHHHHHhCCCCEE----EcCC
Confidence 333211 00 0156888666666666789999988 4566
No 302
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=60.08 E-value=12 Score=38.62 Aligned_cols=64 Identities=22% Similarity=0.267 Sum_probs=43.9
Q ss_pred hHHHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEEC
Q psy3862 118 DLAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVG 188 (671)
Q Consensus 118 d~~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVd 188 (671)
.++++.+.+++ ++|.|-+|.. .++.+.+.++.++ +...+.+....+.+.++.+.+.|||+|.+.
T Consensus 207 tl~ea~eAl~a--GaD~I~LDn~--~~~~l~~av~~~~---~~v~ieaSGGIt~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 207 NLDELNQAIAA--KADIVMLDNF--SGEDIDIAVSIAR---GKVALEVSGNIDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp SHHHHHHHHHT--TCSEEEEESC--CHHHHHHHHHHHT---TTCEEEEESSCCTTTHHHHHTTTCSEEECS
T ss_pred CHHHHHHHHHc--CCCEEEEcCC--CHHHHHHHHHhhc---CCceEEEECCCCHHHHHHHHHcCCCEEEEC
Confidence 35666677777 7888888843 3444444454432 455566655568999999999999999773
No 303
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=59.98 E-value=45 Score=36.07 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=37.8
Q ss_pred HHH-cCCcEEEEcccccccccccccccccc-ccccccccccccccC---ceeeccccCchhHHH-HHHcCCcEEEECc
Q psy3862 398 AMG-AGADFVMLGGMFAGHDQSGGELTNIE-YMFFPLVGDMNSYLG---GVVDGGCTSPGDVAK-AMGAGADFVMLGG 469 (671)
Q Consensus 398 l~~-aG~d~i~id~~a~gh~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~i~gG~v~t~~~a~-~l~aGAd~V~vG~ 469 (671)
|.+ +|+|+|.|-+.. +..+........ ....+.+..+|+.++ .++..|.+.+.+.++ +++. ||.|.+|.
T Consensus 273 L~~~~Gvd~I~vs~g~--~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR 347 (419)
T 3l5a_A 273 VMDVSNIQYLAIASWG--RHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSS 347 (419)
T ss_dssp HHHHSCCCCEEECCTT--CCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEEST
T ss_pred HHhhcCCcEEEEeeCC--ccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHH
Confidence 456 899999985321 100000000000 012344555666553 255556677787777 5777 99999986
No 304
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=59.92 E-value=27 Score=39.22 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=27.9
Q ss_pred HHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCc
Q psy3862 224 GEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGH 277 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~ 277 (671)
.+.++.+.++|+|.|+|-....-+ .-+.++.++++++|.+
T Consensus 120 ~~~ve~a~~aGvd~vrIf~s~sd~--------------~ni~~~i~~ak~~G~~ 159 (539)
T 1rqb_A 120 DRFVDKSAENGMDVFRVFDAMNDP--------------RNMAHAMAAVKKAGKH 159 (539)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhCCCCEEEEEEehhHH--------------HHHHHHHHHHHHCCCe
Confidence 456788899999999997433222 3356777888876644
No 305
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=59.85 E-value=21 Score=38.39 Aligned_cols=112 Identities=18% Similarity=0.159 Sum_probs=64.1
Q ss_pred HHHhCCCceEEEeeccCCCC------------------------hHHHHHHHHHHHhC---CCceEEEEEe---------
Q psy3862 125 ILAALPEIEYICLDVANGYT------------------------QTFVDFVRRIREMY---PKHVIIAGNV--------- 168 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~~------------------------~~~~~~ik~lr~~~---P~~~li~g~v--------- 168 (671)
..++ +.|.|-++.+||+. +-..+.++.+|+.. |...++....
T Consensus 180 a~~A--GfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~ 257 (402)
T 2hsa_B 180 AIEA--GFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSN 257 (402)
T ss_dssp HHHT--TCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSC
T ss_pred HHHc--CCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Confidence 3455 78888888887641 11345566666543 3333333211
Q ss_pred ---ccHHHHHHHHHCC------CcEEEECcCCCceEEEEeccc-C-----Ccchhhhhcc---ccC--CccccccHHHHH
Q psy3862 169 ---VTGEMVEELILSG------ADVIKVGIGPGSVCTTRLKNK-T-----SDFFLIQFYS---CIP--QAGNVVTGEMVE 228 (671)
Q Consensus 169 ---~t~e~a~~Li~AG------aD~IvVdga~G~~~~t~v~~~-~-----~~~~~i~~i~---~~p--~aGnV~t~~~a~ 228 (671)
...+.++.|.++| +|+|.+-++.-... ..... . .+...+..++ .+| ..|++ |.+.+.
T Consensus 258 ~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i-~~~~a~ 334 (402)
T 2hsa_B 258 PLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAY--GQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY-TRELGI 334 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTT--TTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC-CHHHHH
T ss_pred CHHHHHHHHHHHHhcCCccCCceEEEEEecCccccc--cCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC-CHHHHH
Confidence 0236678889999 99998843210000 00000 0 0111222222 256 68999 999999
Q ss_pred HHHHcC-CCEEEEc
Q psy3862 229 ELILSG-ADVIKVG 241 (671)
Q Consensus 229 ~li~aG-AdgvkVG 241 (671)
.+++.| ||.|-+|
T Consensus 335 ~~l~~g~aD~V~ig 348 (402)
T 2hsa_B 335 EAVAQGDADLVSYG 348 (402)
T ss_dssp HHHHTTSCSEEEES
T ss_pred HHHHCCCCceeeec
Confidence 999998 9999777
No 306
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=59.51 E-value=32 Score=34.54 Aligned_cols=151 Identities=17% Similarity=0.196 Sum_probs=78.0
Q ss_pred CCCCceEEecCCcCCC----CCCcceeeeeeecccCCCcccCceEEecCCCccc-cHHHHHHHHHcCCeEE-eecCCC--
Q psy3862 19 LDFKDVMLRPKRSTLK----SRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG-TFEMAKHLAKHGLFTT-IHKYYT-- 90 (671)
Q Consensus 19 l~fdDv~lvP~~~~~~----~~~~Vdlst~lt~r~~~~~~l~~Piv~a~M~~vt-~~~lA~Ala~~gglgv-Ih~n~~-- 90 (671)
++|+-|.+.|.+.+.. ..++|.+.+.+ +.|+ +++++-. -.+...|+. .|.=.+ +|-|..
T Consensus 55 ~~~~aVcV~p~~v~~a~~~L~~s~v~v~tVi----------gFP~--G~~~~~~Kv~Ea~~Ai~-~GAdEIDmViNig~l 121 (239)
T 3ngj_A 55 YKFASVCVNPTWVPLCAELLKGTGVKVCTVI----------GFPL--GATPSEVKAYETKVAVE-QGAEEVDMVINIGMV 121 (239)
T ss_dssp HTCSEEEECGGGHHHHHHHHTTSSCEEEEEE----------STTT--CCSCHHHHHHHHHHHHH-TTCSEEEEECCHHHH
T ss_pred cCCcEEEECHHHHHHHHHHhCCCCCeEEEEe----------ccCC--CCCchHHHHHHHHHHHH-cCCCEEEEEeehHHh
Confidence 7899999999887642 22456665555 3452 3333311 233444433 354444 444421
Q ss_pred ----HHHHHHhhhc----CcccccceEEecC-CChhhHHHHHHH-HHhCCCceEEEeeccCC---CChHHHHHHHHHHHh
Q psy3862 91 ----LEEWKAFAVQ----NPDVIKHVAVSSG-ISAKDLAGLKEI-LAALPEIEYICLDVANG---YTQTFVDFVRRIREM 157 (671)
Q Consensus 91 ----~Eeq~~~i~~----~p~~~~~~~v~~G-~~~~d~~rl~~l-~~a~~~~d~Ivld~a~G---~~~~~~~~ik~lr~~ 157 (671)
.+.+.+.+.. .+...-++-+-.+ ++.+++.++.++ +++ ++|+|-..+.++ -.-..++.+++.- .
T Consensus 122 k~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~a--GADfVKTSTGf~~ggAt~~dv~lmr~~v-g 198 (239)
T 3ngj_A 122 KAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAA--GAEYVKTSTGFGTHGATPEDVKLMKDTV-G 198 (239)
T ss_dssp HTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHH--TCSEEECCCSSSSCCCCHHHHHHHHHHH-G
T ss_pred ccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHH--CcCEEECCCCCCCCCCCHHHHHHHHHhh-C
Confidence 1222222221 1111111112222 444444444333 556 778876654432 1223333444321 1
Q ss_pred CCCceEEEEEeccHHHHHHHHHCCCcEE
Q psy3862 158 YPKHVIIAGNVVTGEMVEELILSGADVI 185 (671)
Q Consensus 158 ~P~~~li~g~v~t~e~a~~Li~AGaD~I 185 (671)
.+...+.+|.+.|.+++.+++++||+.|
T Consensus 199 ~~v~VKasGGIrt~~da~~~i~aGA~ri 226 (239)
T 3ngj_A 199 DKALVKAAGGIRTFDDAMKMINNGASRI 226 (239)
T ss_dssp GGSEEEEESSCCSHHHHHHHHHTTEEEE
T ss_pred CCceEEEeCCCCCHHHHHHHHHhcccce
Confidence 3456788889999999999999999987
No 307
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=59.49 E-value=34 Score=36.27 Aligned_cols=166 Identities=17% Similarity=0.110 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCEEEEcccCCCccccceecccCcchh-----------------------hhHHHHHHHhhhcCCcchhh
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQF-----------------------SAVLECADAAHGLGGHIISF 281 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~ 281 (671)
+.+.++-++|||+||-+ |+.---+=.|-. .-..+..++|+++|..+++
T Consensus 39 ~li~~ak~aGadavKfq--------~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~s- 109 (349)
T 2wqp_A 39 EMVDAAYNAGAEVVKHQ--------THIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFIS- 109 (349)
T ss_dssp HHHHHHHHHTCSEEEEE--------ECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEE-
T ss_pred HHHHHHHHhCCCEEeee--------ecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEE-
Q ss_pred hhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEE
Q psy3862 282 LTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTI 361 (671)
Q Consensus 282 ~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvi 361 (671)
|.-+...||+-.++. +|++==+---.+.+++=+++++.|-=-+|
T Consensus 110 --------------------------t~~d~~svd~l~~~~----------v~~~KI~S~~~~n~~LL~~va~~gkPviL 153 (349)
T 2wqp_A 110 --------------------------TLFSRAAALRLQRMD----------IPAYKIGSGECNNYPLIKLVASFGKPIIL 153 (349)
T ss_dssp --------------------------EECSHHHHHHHHHHT----------CSCEEECGGGTTCHHHHHHHHTTCSCEEE
T ss_pred --------------------------eeCCHHHHHHHHhcC----------CCEEEECcccccCHHHHHHHHhcCCeEEE
Q ss_pred ccCC-CHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccccc----ccccccccccccccccccccc
Q psy3862 362 HKYY-TLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGH----DQSGGELTNIEYMFFPLVGDM 436 (671)
Q Consensus 362 hr~~-~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh----~~~~~~~~~~~~~~~~~~~~~ 436 (671)
-+-+ |++||..-+ +.+.+.|.|++.+. ....| ..--+..+..++..||.+-+
T Consensus 154 stGmat~~Ei~~Av---------------------e~i~~~G~~iiLlh-c~s~Yp~~~~~~nL~ai~~lk~~f~~lpV- 210 (349)
T 2wqp_A 154 STGMNSIESIKKSV---------------------EIIREAGVPYALLH-CTNIYPTPYEDVRLGGMNDLSEAFPDAII- 210 (349)
T ss_dssp ECTTCCHHHHHHHH---------------------HHHHHHTCCEEEEE-CCCCSSCCGGGCCTHHHHHHHHHCTTSEE-
T ss_pred ECCCCCHHHHHHHH---------------------HHHHHcCCCEEEEe-ccCCCCCChhhcCHHHHHHHHHHCCCCCE-
Q ss_pred ccccCceeeccccCchhHHH-HHHcCCcEE
Q psy3862 437 NSYLGGVVDGGCTSPGDVAK-AMGAGADFV 465 (671)
Q Consensus 437 ~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V 465 (671)
.|..|- .| ..++. +...|||.|
T Consensus 211 -g~sdHt-~G-----~~~~~AAvAlGA~iI 233 (349)
T 2wqp_A 211 -GLSDHT-LD-----NYACLGAVALGGSIL 233 (349)
T ss_dssp -EEECCS-SS-----SHHHHHHHHHTCCEE
T ss_pred -EeCCCC-Cc-----HHHHHHHHHhCCCEE
No 308
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=58.79 E-value=9.2 Score=38.42 Aligned_cols=56 Identities=20% Similarity=0.281 Sum_probs=38.8
Q ss_pred CceEEEeeccCCCChHHHHHHHHHHHhCCCceEE-EEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 131 EIEYICLDVANGYTQTFVDFVRRIREMYPKHVII-AGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 131 ~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li-~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
+..++.++. .|... -.++++++|+..+...++ ++.+.++|.++++.+ |||.+++.+
T Consensus 159 g~~~vY~e~-sG~~g-~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGS 215 (235)
T 3w01_A 159 RLPVMYIEY-SGIYG-DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGD 215 (235)
T ss_dssp CCSEEEEEC-TTSCC-CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECT
T ss_pred CCCEEEEec-CCCcC-CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECC
Confidence 445666665 45432 356777776655445555 447899999999887 999999954
No 309
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=58.59 E-value=6.3 Score=41.39 Aligned_cols=67 Identities=25% Similarity=0.315 Sum_probs=34.4
Q ss_pred HHHHHcCCcEEEEcccc--ccccccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEE
Q psy3862 396 AKAMGAGADFVMLGGMF--AGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFV 465 (671)
Q Consensus 396 ~~l~~aG~d~i~id~~a--~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V 465 (671)
.+++++|||+|=|.+-+ .| .......++++..|.++.+++.++++.+-=--...++++ ++++|||.|
T Consensus 72 ~~~v~~GAdIIDIGgeSTrPG---~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~~~~VaeaAl~aGa~iI 141 (318)
T 2vp8_A 72 HRAVADGADVIDVGGVKAGPG---ERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLI 141 (318)
T ss_dssp HHHHHTTCSEEEEC-------------CHHHHHHHHHHHHHHHHHHSTTCEEEEECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHCCCCEEEECCCcCCCC---CCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCCCHHHHHHHHHhCCCEE
Confidence 45688999999998533 23 122333444555555655554432211111124455666 689999976
No 310
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=57.26 E-value=49 Score=31.95 Aligned_cols=110 Identities=11% Similarity=0.009 Sum_probs=56.2
Q ss_pred HHHHHHHHcCCeEE-eecCCCHH---HHHHhhhcCcccccceEE-ecCCChhhHHHHHHHHHhCCCceEEEeecc-----
Q psy3862 71 EMAKHLAKHGLFTT-IHKYYTLE---EWKAFAVQNPDVIKHVAV-SSGISAKDLAGLKEILAALPEIEYICLDVA----- 140 (671)
Q Consensus 71 ~lA~Ala~~gglgv-Ih~n~~~E---eq~~~i~~~p~~~~~~~v-~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a----- 140 (671)
..+..++++|.=++ +|.....+ +..+.+++. . . ...+ ..+.. ..+++..+.+. +.+.+.+-..
T Consensus 74 ~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~-g-~-~~~~d~l~~~--T~~~~~~~~~~--g~d~v~~~~~~~~~~ 146 (218)
T 3jr2_A 74 ILSRMAFEAGADWITVSAAAHIATIAACKKVADEL-N-G-EIQIEIYGNW--TMQDAKAWVDL--GITQAIYHRSRDAEL 146 (218)
T ss_dssp HHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHH-T-C-EEEEECCSSC--CHHHHHHHHHT--TCCEEEEECCHHHHH
T ss_pred HHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHh-C-C-ccceeeeecC--CHHHHHHHHHc--Cccceeeeecccccc
Confidence 35666777776555 78654433 222333221 0 1 1211 12221 12455555554 6676544211
Q ss_pred CCC--ChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 141 NGY--TQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 141 ~G~--~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
.|. ....++.+++++. +...+++....+.+.+..++++|||.+++.+
T Consensus 147 ~g~~~~~~~l~~i~~~~~--~~~pi~v~GGI~~~~~~~~~~aGAd~vvvGs 195 (218)
T 3jr2_A 147 AGIGWTTDDLDKMRQLSA--LGIELSITGGIVPEDIYLFEGIKTKTFIAGR 195 (218)
T ss_dssp HTCCSCHHHHHHHHHHHH--TTCEEEEESSCCGGGGGGGTTSCEEEEEESG
T ss_pred CCCcCCHHHHHHHHHHhC--CCCCEEEECCCCHHHHHHHHHcCCCEEEEch
Confidence 011 2344555665543 3444444333368888899999999999853
No 311
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=56.60 E-value=85 Score=31.65 Aligned_cols=18 Identities=28% Similarity=0.366 Sum_probs=13.4
Q ss_pred HHHHHHHHcCCCEEEEcc
Q psy3862 225 EMVEELILSGADVIKVGI 242 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~ 242 (671)
+.+..+-++|||.||.+.
T Consensus 41 ~~a~~l~~~Ga~~vk~~~ 58 (262)
T 1zco_A 41 KVAEFLAEVGIKVLRGGA 58 (262)
T ss_dssp HHHHHHHHTTCCEEECBS
T ss_pred HHHHHHHHcCCCEEEEEe
Confidence 445555679999999885
No 312
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=56.42 E-value=18 Score=32.73 Aligned_cols=30 Identities=13% Similarity=0.184 Sum_probs=21.6
Q ss_pred HHHHHHHHcCCeEEEc--cCCCHHHHHHHHhc
Q psy3862 347 EMAKHLAKHGLFTTIH--KYYTLEEWKAFAVQ 376 (671)
Q Consensus 347 ~mA~~la~~Gglgvih--r~~~~e~~~~~v~~ 376 (671)
.|...+-+..|+-+++ .+.++|+.++.+.+
T Consensus 21 ~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~ 52 (137)
T 1ccw_A 21 KILDHAFTNAGFNVVNIGVLSPQELFIKAAIE 52 (137)
T ss_dssp HHHHHHHHHTTCEEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHh
Confidence 4566677778888886 57788887777654
No 313
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=56.24 E-value=14 Score=37.02 Aligned_cols=114 Identities=17% Similarity=0.165 Sum_probs=61.1
Q ss_pred HHHHHHHHHcCCeEE-eecCCC--HHHHHHhhhcCc--cc----ccceEE--ecCCChhhHHHHHHHHHhCCCceEEEe-
Q psy3862 70 FEMAKHLAKHGLFTT-IHKYYT--LEEWKAFAVQNP--DV----IKHVAV--SSGISAKDLAGLKEILAALPEIEYICL- 137 (671)
Q Consensus 70 ~~lA~Ala~~gglgv-Ih~n~~--~Eeq~~~i~~~p--~~----~~~~~v--~~G~~~~d~~rl~~l~~a~~~~d~Ivl- 137 (671)
......++++|.=++ +|...+ +++..+.+++.. .. ...+++ ++..+. +++..++. .+|.+.+
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~---~~l~~~l~---~~D~vlvM 155 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPI---SELEPYLD---QIDVIQLL 155 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCG---GGGTTTTT---TCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCChH---HHHHHHhh---cCceeeee
Confidence 456666777776664 786533 334444444331 00 112233 233332 23333322 4566533
Q ss_pred --eccCCC---ChHHHHHHHHHHHhCC----CceEEEEEeccHHHHHHHHH--CCCcEEEECc
Q psy3862 138 --DVANGY---TQTFVDFVRRIREMYP----KHVIIAGNVVTGEMVEELIL--SGADVIKVGI 189 (671)
Q Consensus 138 --d~a~G~---~~~~~~~ik~lr~~~P----~~~li~g~v~t~e~a~~Li~--AGaD~IvVdg 189 (671)
+..++- .....+.++++++..+ ...+.+....+.+.+..+.+ +|||.+++.+
T Consensus 156 sv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~~~~~~~aGad~~VvGS 218 (237)
T 3cu2_A 156 TLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQGTHQIDWLVSGS 218 (237)
T ss_dssp SEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHHSSSCCCCEEECG
T ss_pred eeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHHHHHHHHhCCCCcEEEEee
Confidence 543332 2445667777765432 23344444457899999999 9999999854
No 314
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=56.13 E-value=15 Score=35.93 Aligned_cols=128 Identities=18% Similarity=0.179 Sum_probs=65.4
Q ss_pred CcceEecCCCCCC--------CHHHHHHHHHcCCeEEEc--cCCCHHHHHHHHhcCccc-ccceeeecccChhhHHHHHH
Q psy3862 332 GVPIIAANMDTVG--------TFEMAKHLAKHGLFTTIH--KYYTLEEWKAFAVQNPDV-IKHVADGGCTSPGDVAKAMG 400 (671)
Q Consensus 332 ~iPiIaa~MDtV~--------~~~mA~~la~~Gglgvih--r~~~~e~~~~~v~~~~~~-~~~v~~~~~~~~~~~~~l~~ 400 (671)
++||++=++|..- +++|+.+++ .-++-+.| |-.+.++..+.+....+. +..+...+ ..++.+.+.+
T Consensus 53 ~~~v~aqd~~~~~~ga~tGei~~~~~~~~G-ad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~--~~~e~~~~~~ 129 (219)
T 2h6r_A 53 NIPVYAQHIDNINPGSHTGHILAEAIKDCG-CKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTN--NINTSKAVAA 129 (219)
T ss_dssp CSCBEESCCCSCCSBSCTTCCCHHHHHHHT-CCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEES--SSHHHHHHTT
T ss_pred CCcEEEEECChhhcCCccCchHHHHHHHcC-CCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeC--CchHHHHHHh
Confidence 6999998888653 255555543 33444456 346777766655432221 11122121 2234445556
Q ss_pred cCCcEEEEccccc---c---ccccccccccccccccccccccccccC--ceeeccccCchhHHH-HHHcCCcEEEECc
Q psy3862 401 AGADFVMLGGMFA---G---HDQSGGELTNIEYMFFPLVGDMNSYLG--GVVDGGCTSPGDVAK-AMGAGADFVMLGG 469 (671)
Q Consensus 401 aG~d~i~id~~a~---g---h~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~gG~v~t~~~a~-~l~aGAd~V~vG~ 469 (671)
.|.++|.+-.... | ..... +- ++. .++.++++.. .++.||-+.+.+.++ +...|||+|.||.
T Consensus 130 ~~~~~i~~~~~~~iGtG~~~~t~~~-~~---~~~---~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGs 200 (219)
T 2h6r_A 130 LSPDCIAVEPPELIGTGIPVSKANP-EV---VEG---TVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLAS 200 (219)
T ss_dssp TCCSEEEECCCC---------------C---SHH---HHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESH
T ss_pred CCCCEEEEEeccccccCCCCccCCH-HH---HHH---HHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcH
Confidence 6888888762211 1 11100 00 000 1112233221 255666678888877 5689999999984
No 315
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=55.96 E-value=1e+02 Score=29.02 Aligned_cols=126 Identities=12% Similarity=-0.021 Sum_probs=60.6
Q ss_pred CceEEecCCCccccHHHHHHHHHcCCeEE-eecCCCHHHHHHhhhcCcccccceEEecC-C-ChhhHHHHHHHHHhCCCc
Q psy3862 56 GVPIIAANMDTVGTFEMAKHLAKHGLFTT-IHKYYTLEEWKAFAVQNPDVIKHVAVSSG-I-SAKDLAGLKEILAALPEI 132 (671)
Q Consensus 56 ~~Piv~a~M~~vt~~~lA~Ala~~gglgv-Ih~n~~~Eeq~~~i~~~p~~~~~~~v~~G-~-~~~d~~rl~~l~~a~~~~ 132 (671)
+.|++.--|..-.....+..+.+.|.=++ +|.....+...+..........++++..- . ++. +++..+.+. +.
T Consensus 53 ~~~i~~~l~~~di~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~--~~~~~~~~~--g~ 128 (207)
T 3ajx_A 53 DKIVFADMKTMDAGELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKA--TRAQEVRAL--GA 128 (207)
T ss_dssp TSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHH--HHHHHHHHT--TC
T ss_pred CCeEEEEEEecCccHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecCCChH--HHHHHHHHh--CC
Confidence 46777655522112344666667766676 58776544322221111000112333221 1 222 234444443 56
Q ss_pred eEEEeecc-----CCC-ChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 133 EYICLDVA-----NGY-TQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 133 d~Ivld~a-----~G~-~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
+.+.+..+ .|. ... +.++++++. ...+++....+.+.++.++++|||.+++.+
T Consensus 129 d~v~~~~~~~~~~~g~~~~~--~~i~~~~~~--~~pi~v~GGI~~~~~~~~~~aGad~vvvGs 187 (207)
T 3ajx_A 129 KFVEMHAGLDEQAKPGFDLN--GLLAAGEKA--RVPFSVAGGVKVATIPAVQKAGAEVAVAGG 187 (207)
T ss_dssp SEEEEECCHHHHTSTTCCTH--HHHHHHHHH--TSCEEEESSCCGGGHHHHHHTTCSEEEESH
T ss_pred CEEEEEecccccccCCCchH--HHHHHhhCC--CCCEEEECCcCHHHHHHHHHcCCCEEEEee
Confidence 76622211 121 122 566665542 223433333457889999999999998843
No 316
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=55.87 E-value=50 Score=34.50 Aligned_cols=88 Identities=18% Similarity=0.159 Sum_probs=56.5
Q ss_pred HHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCCceEEEEEecc----HHHHHHHHHCCCcEEEECcCCCceE
Q psy3862 122 LKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPKHVIIAGNVVT----GEMVEELILSGADVIKVGIGPGSVC 195 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~~~li~g~v~t----~e~a~~Li~AGaD~IvVdga~G~~~ 195 (671)
++.+.+. +++.|.+....|. |..+.++++.+++.+|...+-.-.-.| ...+.+.+++|||.|.....+
T Consensus 175 ~~~~~~~--Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~G---- 248 (337)
T 3ble_A 175 VEHLSKE--HIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASING---- 248 (337)
T ss_dssp HHHHHTS--CCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGG----
T ss_pred HHHHHHc--CCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEeccc----
Confidence 3444444 6778877666665 577888899998888754433222222 356667889999999543211
Q ss_pred EEEecccCCcchhhhhccccCCccccccHHHHHHHHHc
Q psy3862 196 TTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILS 233 (671)
Q Consensus 196 ~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~a 233 (671)
+. . .+||+.|-+-+..|-..
T Consensus 249 ---lG----~-----------~aGN~~~E~lv~~L~~~ 268 (337)
T 3ble_A 249 ---LG----E-----------RAGNTPLEALVTTIHDK 268 (337)
T ss_dssp ---CS----S-----------TTCBCBHHHHHHHHHHH
T ss_pred ---cc----c-----------cccchhHHHHHHHHHHh
Confidence 00 0 48999988888777665
No 317
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=55.60 E-value=12 Score=37.43 Aligned_cols=56 Identities=20% Similarity=0.347 Sum_probs=38.3
Q ss_pred CceEEEeeccCCCChHHHHHHHHHHHhCCCce-EEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 131 EIEYICLDVANGYTQTFVDFVRRIREMYPKHV-IIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 131 ~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~-li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
+..++-++. .|... -.+.++++++..+... .++|.+.++|+++.+. +|||.+++.+
T Consensus 153 g~~~VYld~-sG~~~-~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 153 QLPIFYLEY-SGVLG-DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGN 209 (228)
T ss_dssp TCSEEEEEC-TTSCC-CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECT
T ss_pred CCCEEEecC-CCCcC-CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEECh
Confidence 446677765 34322 3566777766553334 4555789999999998 7999999854
No 318
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=55.49 E-value=21 Score=36.89 Aligned_cols=193 Identities=11% Similarity=0.068 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc------CCCce---------EEEEecccCCcchhhhhcc
Q psy3862 149 DFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI------GPGSV---------CTTRLKNKTSDFFLIQFYS 213 (671)
Q Consensus 149 ~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg------a~G~~---------~~t~v~~~~~~~~~i~~i~ 213 (671)
..++++++..+ .+++-+..+.-.|+.+.++|.|+|-+.+ ..|+. +...++....... ++.+.
T Consensus 7 ~~lr~l~~~~~--~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~-~Pvia 83 (295)
T 1xg4_A 7 KAFRAALTKEN--PLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCS-LPLLV 83 (295)
T ss_dssp HHHHHHHHHSS--SEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCC-SCEEE
T ss_pred HHHHHHHhCCC--cEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCC-CCEEe
Q ss_pred ccC--Cc-cccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCc--------chhhhHHHHHHHhhhcCCcchhhh
Q psy3862 214 CIP--QA-GNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGY--------PQFSAVLECADAAHGLGGHIISFL 282 (671)
Q Consensus 214 ~~p--~a-GnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 282 (671)
++| -+ +----.+.++.++++||+||++==+.+ -.+||-.- -+..-|..+.+++..-+..|++
T Consensus 84 D~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~-----~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~a-- 156 (295)
T 1xg4_A 84 DADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVG-----AKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMA-- 156 (295)
T ss_dssp ECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCS-----SCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEE--
T ss_pred cCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCC-----CcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEE--
Q ss_pred hhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEc
Q psy3862 283 TAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIH 362 (671)
Q Consensus 283 ~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvih 362 (671)
|.|......+.
T Consensus 157 -----------------------------Rtda~~~~gl~---------------------------------------- 167 (295)
T 1xg4_A 157 -----------------------------RTDALAVEGLD---------------------------------------- 167 (295)
T ss_dssp -----------------------------EECCHHHHCHH----------------------------------------
T ss_pred -----------------------------ecHHhhhcCHH----------------------------------------
Q ss_pred cCCCHHHHHHHHhcCcccccceeeecccCh--hhHHHHHHcCCcEEEEcccccccccccccccccccccccccccccccc
Q psy3862 363 KYYTLEEWKAFAVQNPDVIKHVADGGCTSP--GDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYL 440 (671)
Q Consensus 363 r~~~~e~~~~~v~~~~~~~~~v~~~~~~~~--~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (671)
+ +|...+.+||||.|++. -.|..+.++++.
T Consensus 168 -----------------------------~ai~ra~ay~eAGAd~i~~e-------------------~~~~~~~~~~i~ 199 (295)
T 1xg4_A 168 -----------------------------AAIERAQAYVEAGAEMLFPE-------------------AITELAMYRQFA 199 (295)
T ss_dssp -----------------------------HHHHHHHHHHHTTCSEEEET-------------------TCCSHHHHHHHH
T ss_pred -----------------------------HHHHHHHHHHHcCCCEEEEe-------------------CCCCHHHHHHHH
Q ss_pred Cc--------eeeccccCchhHHHHHHcCCcEEEEC
Q psy3862 441 GG--------VVDGGCTSPGDVAKAMGAGADFVMLG 468 (671)
Q Consensus 441 ~~--------~i~gG~v~t~~~a~~l~aGAd~V~vG 468 (671)
.. ...+|.--.-+..++-+.|++.|..|
T Consensus 200 ~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~ 235 (295)
T 1xg4_A 200 DAVQVPILANITEFGATPLFTTDELRSAHVAMALYP 235 (295)
T ss_dssp HHHCSCBEEECCSSSSSCCCCHHHHHHTTCSEEEES
T ss_pred HHcCCCEEEEecccCCCCCCCHHHHHHcCCCEEEEC
No 319
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=54.92 E-value=56 Score=33.42 Aligned_cols=92 Identities=14% Similarity=0.156 Sum_probs=57.9
Q ss_pred HHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCCceEEEEEec----cHHHHHHHHHCCCcEEEECcCC-Cce
Q psy3862 122 LKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPKHVIIAGNVV----TGEMVEELILSGADVIKVGIGP-GSV 194 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~~~li~g~v~----t~e~a~~Li~AGaD~IvVdga~-G~~ 194 (671)
++.+.+. +++.+.+...+|. |....++++.+++.+|...+..-.-. ..+.+.+.+++|++.|.....+ | .
T Consensus 165 ~~~~~~~--G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv~GlG-~ 241 (302)
T 2ftp_A 165 ARELQQM--GCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLG-G 241 (302)
T ss_dssp HHHHHHT--TCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCC-B
T ss_pred HHHHHHc--CCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEecccccC-C
Confidence 3444555 7788877777776 56677888888877775444332211 2467778899999999543311 1 0
Q ss_pred EEEEecccCCcchhhhhccccC-CccccccHHHHHHHHHc
Q psy3862 195 CTTRLKNKTSDFFLIQFYSCIP-QAGNVVTGEMVEELILS 233 (671)
Q Consensus 195 ~~t~v~~~~~~~~~i~~i~~~p-~aGnV~t~~~a~~li~a 233 (671)
| | .-| .+||+.|-+-+..|-..
T Consensus 242 c--------p---------~a~gr~GN~~~E~lv~~l~~~ 264 (302)
T 2ftp_A 242 C--------P---------YAKGATGNVASEDVLYLLNGL 264 (302)
T ss_dssp C--------G---------GGTTCBCBCBHHHHHHHHHHT
T ss_pred C--------C---------CCCCCCCChhHHHHHHHHHhc
Confidence 0 0 012 58999988888776654
No 320
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=54.32 E-value=37 Score=38.74 Aligned_cols=112 Identities=14% Similarity=0.164 Sum_probs=64.3
Q ss_pred HHHhCCCceEEEeeccCCC-C------------------------hHHHHHHHHHHHh----CCCceEEEEEe-----cc
Q psy3862 125 ILAALPEIEYICLDVANGY-T------------------------QTFVDFVRRIREM----YPKHVIIAGNV-----VT 170 (671)
Q Consensus 125 l~~a~~~~d~Ivld~a~G~-~------------------------~~~~~~ik~lr~~----~P~~~li~g~v-----~t 170 (671)
..++ +.|.|-+..+||+ . +-..+.++.+|+. +|...++.+.- .+
T Consensus 165 a~~a--GfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~ 242 (690)
T 3k30_A 165 SIEA--GYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGIT 242 (690)
T ss_dssp HHHH--TCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCC
T ss_pred HHHc--CCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCC
Confidence 3455 7788888888887 1 1234556666654 34444454321 11
Q ss_pred ----HHHHHHHHHCCCcEEEECcCCCceEEEEecccC-Cc---chhhhhcc---ccC--CccccccHHHHHHHHHcC-CC
Q psy3862 171 ----GEMVEELILSGADVIKVGIGPGSVCTTRLKNKT-SD---FFLIQFYS---CIP--QAGNVVTGEMVEELILSG-AD 236 (671)
Q Consensus 171 ----~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~-~~---~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-Ad 236 (671)
.+.++.|.+ |+|+|.+.+++-+.. .....+ +. .+....++ .+| ..|++-|.+.+.++++.| ||
T Consensus 243 ~~~~~~~~~~l~~-~~d~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d 319 (690)
T 3k30_A 243 REDIEGVLRELGE-LPDLWDFAMGSWEGD--SVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILD 319 (690)
T ss_dssp HHHHHHHHHHHTT-SSSEEEEECSCHHHH--TCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHh-hcCEEEEeccccccc--CCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcc
Confidence 244566655 899997755321100 000000 11 12223332 356 689999999999999998 99
Q ss_pred EEEEc
Q psy3862 237 VIKVG 241 (671)
Q Consensus 237 gvkVG 241 (671)
.|-+|
T Consensus 320 ~v~~g 324 (690)
T 3k30_A 320 LIGAA 324 (690)
T ss_dssp EEEES
T ss_pred eEEEc
Confidence 99777
No 321
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=53.06 E-value=9.4 Score=38.63 Aligned_cols=64 Identities=13% Similarity=0.020 Sum_probs=44.5
Q ss_pred HHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc-------ccC--CccccccHHHHHHHHHc--CCCEEEE
Q psy3862 172 EMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS-------CIP--QAGNVVTGEMVEELILS--GADVIKV 240 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~-------~~p--~aGnV~t~~~a~~li~a--GAdgvkV 240 (671)
+.++.+.++ ++.|.+-. .++.=...-+++.++..+. .+| +.|||.+.+.++.+++. ||+++-+
T Consensus 162 e~a~~~~~~-a~~il~t~-----i~~dG~~~G~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gviv 235 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHA-----ADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTF 235 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC------------CCCCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHh-cCEEEEEe-----eccccCcCCCCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEe
Confidence 888999999 99997722 1110001124555554442 356 68999999999999998 9999998
Q ss_pred c
Q psy3862 241 G 241 (671)
Q Consensus 241 G 241 (671)
|
T Consensus 236 g 236 (260)
T 2agk_A 236 G 236 (260)
T ss_dssp C
T ss_pred e
Confidence 8
No 322
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=52.41 E-value=13 Score=38.56 Aligned_cols=65 Identities=28% Similarity=0.401 Sum_probs=38.2
Q ss_pred HHHHHcCCcEEEEcccc--ccccccccccccccccccccccccccccCc--eeeccccCchhHHH-HHHcCCcEEE
Q psy3862 396 AKAMGAGADFVMLGGMF--AGHDQSGGELTNIEYMFFPLVGDMNSYLGG--VVDGGCTSPGDVAK-AMGAGADFVM 466 (671)
Q Consensus 396 ~~l~~aG~d~i~id~~a--~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~gG~v~t~~~a~-~l~aGAd~V~ 466 (671)
.+++++|||+|=|.+-+ .|. ..+....++++..|.++.+++. .- -|+ -...++++ ++++||+.|-
T Consensus 53 ~~~v~~GAdiIDIGgeSTrPga--~~v~~~eE~~Rv~pvi~~l~~~-~vpiSID---T~~~~Va~aAl~aGa~iIN 122 (294)
T 2y5s_A 53 ERMIAEGADLLDIGGESTRPGA--PPVPLDEELARVIPLVEALRPL-NVPLSID---TYKPAVMRAALAAGADLIN 122 (294)
T ss_dssp HHHHHTTCSEEEEESSCCSTTC--CCCCHHHHHHHHHHHHHHHGGG-CSCEEEE---CCCHHHHHHHHHHTCSEEE
T ss_pred HHHHHCCCCEEEECCCcCCCCC--CCCCHHHHHHHHHHHHHHHhhC-CCeEEEE---CCCHHHHHHHHHcCCCEEE
Confidence 45688999999998533 232 1233344555566666665543 11 122 24456666 6899999873
No 323
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=51.64 E-value=16 Score=37.61 Aligned_cols=66 Identities=29% Similarity=0.354 Sum_probs=34.1
Q ss_pred HHHHHcCCcEEEEccccc--cccccccccccccccccccccccccccCc--eeeccccCchhHHH-HHHcCCcEEEE
Q psy3862 396 AKAMGAGADFVMLGGMFA--GHDQSGGELTNIEYMFFPLVGDMNSYLGG--VVDGGCTSPGDVAK-AMGAGADFVML 467 (671)
Q Consensus 396 ~~l~~aG~d~i~id~~a~--gh~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~gG~v~t~~~a~-~l~aGAd~V~v 467 (671)
.+++++|||+|-|.+-+. |. ..+....++++..|.++.+++. .- -|+ -...++++ ++++||+.|-=
T Consensus 36 ~~~v~~GAdiIDIGgestrpga--~~v~~~eE~~Rv~pvi~~l~~~-~~piSID---T~~~~va~aAl~aGa~iINd 106 (280)
T 1eye_A 36 LAMAAAGAGIVDVGGESSRPGA--TRVDPAVETSRVIPVVKELAAQ-GITVSID---TMRADVARAALQNGAQMVND 106 (280)
T ss_dssp HHHHHTTCSEEEEECC----------------HHHHHHHHHHHHHT-TCCEEEE---CSCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHCCCCEEEECCccCCCCC--CCCCHHHHHHHHHHHHHHhhcC-CCEEEEe---CCCHHHHHHHHHcCCCEEEE
Confidence 345789999999985332 32 1223334455555666555532 11 122 34456666 68999998843
No 324
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=51.56 E-value=48 Score=36.45 Aligned_cols=40 Identities=25% Similarity=0.364 Sum_probs=27.5
Q ss_pred HHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCc
Q psy3862 224 GEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGH 277 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~ 277 (671)
...++.+.++|+|.++|-....-+ .-+.++.+++++.|.+
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~--------------~ni~~~i~~ak~~G~~ 142 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDV--------------RNMQQALQAVKKMGAH 142 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhCCcCEEEEEEecCHH--------------HHHHHHHHHHHHCCCE
Confidence 456788899999999987433222 2456777778776644
No 325
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=50.80 E-value=2e+02 Score=30.34 Aligned_cols=16 Identities=19% Similarity=0.389 Sum_probs=12.1
Q ss_pred HHH-HHHcCCcEEEECc
Q psy3862 454 VAK-AMGAGADFVMLGG 469 (671)
Q Consensus 454 ~a~-~l~aGAd~V~vG~ 469 (671)
++. +..+|||++++=.
T Consensus 295 ~a~AAvA~GA~Gl~IE~ 311 (350)
T 1vr6_A 295 LSRAAIAVGAHGIIVEV 311 (350)
T ss_dssp HHHHHHHHTCSEEEEEB
T ss_pred HHHHHHHhCCCEEEEEe
Confidence 344 4689999999875
No 326
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=50.60 E-value=1.1e+02 Score=32.74 Aligned_cols=166 Identities=11% Similarity=0.071 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCEEEEcccCCCccccceecccCcchh------------------------hhHHHHHHHhhhcCCcchh
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQF------------------------SAVLECADAAHGLGGHIIS 280 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~------------------------~~~~~~~~~~~~~~~~~~~ 280 (671)
+.+.++-++|||+||-+ |..---+=.|-. .-..+..++|+++|..+++
T Consensus 48 ~li~~Ak~aGAdavKfQ--------~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~s 119 (385)
T 1vli_A 48 ALIDAAAEAGADAVKFQ--------MFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLS 119 (385)
T ss_dssp HHHHHHHHHTCSEEEEC--------CBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHhCCCEEeee--------eeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEE
Q ss_pred hhhhccceeeccccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEE
Q psy3862 281 FLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTT 360 (671)
Q Consensus 281 ~~~~~~~~i~~~~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgv 360 (671)
|.-+...||+-.++. +|++==+---.+.+.+=+++++.|-=-+
T Consensus 120 ---------------------------tpfD~~svd~l~~~~----------vd~~KIgS~~~~N~pLL~~va~~gKPVi 162 (385)
T 1vli_A 120 ---------------------------TVCDEGSADLLQSTS----------PSAFKIASYEINHLPLLKYVARLNRPMI 162 (385)
T ss_dssp ---------------------------BCCSHHHHHHHHTTC----------CSCEEECGGGTTCHHHHHHHHTTCSCEE
T ss_pred ---------------------------ccCCHHHHHHHHhcC----------CCEEEECcccccCHHHHHHHHhcCCeEE
Q ss_pred EccCC-CHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCC-cEEEEccccccc----ccccccccccccccccccc
Q psy3862 361 IHKYY-TLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGA-DFVMLGGMFAGH----DQSGGELTNIEYMFFPLVG 434 (671)
Q Consensus 361 ihr~~-~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~-d~i~id~~a~gh----~~~~~~~~~~~~~~~~~~~ 434 (671)
|-+-+ |++||..-+ +.+.+.|. |++.+. ....| ..--+..+..++..||.+-
T Consensus 163 LStGmaTl~Ei~~Av---------------------e~i~~~Gn~~iiLlh-c~s~YPtp~~~~nL~aI~~Lk~~f~~lp 220 (385)
T 1vli_A 163 FSTAGAEISDVHEAW---------------------RTIRAEGNNQIAIMH-CVAKYPAPPEYSNLSVIPMLAAAFPEAV 220 (385)
T ss_dssp EECTTCCHHHHHHHH---------------------HHHHTTTCCCEEEEE-ECSSSSCCGGGCCTTHHHHHHHHSTTSE
T ss_pred EECCCCCHHHHHHHH---------------------HHHHHCCCCcEEEEe-ccCCCCCChhhcCHHHHHHHHHHcCCCC
Q ss_pred ccccccCceeeccccCc-hhHHH-HHHcCCcEE
Q psy3862 435 DMNSYLGGVVDGGCTSP-GDVAK-AMGAGADFV 465 (671)
Q Consensus 435 ~~~~~~~~~i~gG~v~t-~~~a~-~l~aGAd~V 465 (671)
+..-.=-.. ..++. +...||+.|
T Consensus 221 --------VG~SdHt~G~~~~~~AAvAlGA~iI 245 (385)
T 1vli_A 221 --------IGFSDHSEHPTEAPCAAVRLGAKLI 245 (385)
T ss_dssp --------EEEEECCSSSSHHHHHHHHTTCSEE
T ss_pred --------EEeCCCCCCchHHHHHHHHcCCCEE
No 327
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=49.28 E-value=12 Score=36.44 Aligned_cols=47 Identities=26% Similarity=0.372 Sum_probs=31.3
Q ss_pred eccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEE
Q psy3862 138 DVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKV 187 (671)
Q Consensus 138 d~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvV 187 (671)
...+|... +.++++++......+.+|-+.++|+++.+++||||+|..
T Consensus 132 EiLPGi~p---~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsT 178 (192)
T 3kts_A 132 ELLPGIIP---EQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTT 178 (192)
T ss_dssp EEECTTCH---HHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEE
T ss_pred EECCchhH---HHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEe
Confidence 44456543 455555544322234455688999999999999999965
No 328
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=48.64 E-value=42 Score=34.68 Aligned_cols=64 Identities=11% Similarity=0.204 Sum_probs=51.2
Q ss_pred CHHHHHHHHHcCCeEEEccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEc
Q psy3862 345 TFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLG 409 (671)
Q Consensus 345 ~~~mA~~la~~Gglgvihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id 409 (671)
+.+-+.+..+.|.=.+.--+.++++..+.++.++.- ..+.++|+++++.+..+.++|+|+|.+-
T Consensus 217 tlee~~eA~~aGaD~I~ld~~~~e~l~~~v~~~~~~-~~I~ASGGIt~~~i~~~a~~GvD~isvG 280 (296)
T 1qap_A 217 NLDELDDALKAGADIIMLDNFNTDQMREAVKRVNGQ-ARLEVSGNVTAETLREFAETGVDFISVG 280 (296)
T ss_dssp SHHHHHHHHHTTCSEEEESSCCHHHHHHHHHTTCTT-CCEEECCCSCHHHHHHHHHTTCSEEECS
T ss_pred CHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHhCCC-CeEEEECCCCHHHHHHHHHcCCCEEEEe
Confidence 346666667788777877899999999888765431 3577899999999999999999999986
No 329
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=48.05 E-value=78 Score=32.39 Aligned_cols=104 Identities=16% Similarity=0.026 Sum_probs=56.5
Q ss_pred CCCHHHHHHHHhcC----ccccccee----eecccChhhHH----HHHHcCCcEEEEcccc-cccccccccccccccccc
Q psy3862 364 YYTLEEWKAFAVQN----PDVIKHVA----DGGCTSPGDVA----KAMGAGADFVMLGGMF-AGHDQSGGELTNIEYMFF 430 (671)
Q Consensus 364 ~~~~e~~~~~v~~~----~~~~~~v~----~~~~~~~~~~~----~l~~aG~d~i~id~~a-~gh~~~~~~~~~~~~~~~ 430 (671)
++|+|+..+.+.+. ++.-..+. .++-+.++.+. .+.++|+|.|+|-++. ...-....++++.++..+
T Consensus 113 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 113 KMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhc
Confidence 67888877766543 11111111 12223445433 3367899999998665 333455556666666666
Q ss_pred cccccc-ccccCceeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 431 PLVGDM-NSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 431 ~~~~~~-~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
|.++.+ -++..+- +-| ....+.-.++++||+.|=.-+
T Consensus 193 ~~~~~~~l~~H~Hn-d~G-la~AN~laA~~aGa~~vd~sv 230 (293)
T 3ewb_X 193 KQFDDIIFASHCHD-DLG-MATANALAAIENGARRVEGTI 230 (293)
T ss_dssp TTGGGSEEEEECBC-TTS-CHHHHHHHHHHTTCCEEEEBG
T ss_pred CCccCceEEEEeCC-CcC-hHHHHHHHHHHhCCCEEEeec
Confidence 643211 1222221 223 234444556899999887665
No 330
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=47.88 E-value=78 Score=36.72 Aligned_cols=89 Identities=17% Similarity=0.229 Sum_probs=57.1
Q ss_pred HHHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCCceEEEEEecc----HHHHHHHHHCCCcEEEECcCCCce
Q psy3862 121 GLKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPKHVIIAGNVVT----GEMVEELILSGADVIKVGIGPGSV 194 (671)
Q Consensus 121 rl~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~~~li~g~v~t----~e~a~~Li~AGaD~IvVdga~G~~ 194 (671)
.++++.++ +++.|.+....|. +....++++.+++.+|...+-.-.-.| ...+.++++||||.|.....+
T Consensus 266 ~a~~l~~~--Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~G--- 340 (718)
T 3bg3_A 266 LAEELVRA--GTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADS--- 340 (718)
T ss_dssp HHHHHHHH--TCSEEEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGG---
T ss_pred HHHHHHHc--CCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEecCcc---
Confidence 44566677 7788888777776 567788899998888754432222222 356667889999999543311
Q ss_pred EEEEecccCCcchhhhhccccCCccccccHHHHHHHHHc
Q psy3862 195 CTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILS 233 (671)
Q Consensus 195 ~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~a 233 (671)
+.. -+||..+-.-+.+|-..
T Consensus 341 ----lGe---------------rtGN~~lE~vv~~L~~~ 360 (718)
T 3bg3_A 341 ----MSG---------------MTSQPSMGALVACTRGT 360 (718)
T ss_dssp ----GCS---------------TTSCCBHHHHHHHHTTS
T ss_pred ----ccc---------------ccCchhHHHHHHHHHhc
Confidence 000 37888777776666544
No 331
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=47.20 E-value=2.4e+02 Score=28.56 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=25.9
Q ss_pred HHHHHHHcCCCEEEEcccCCCccccc-eecccCcchhhhHHHHHHHhhhcCCcchh
Q psy3862 226 MVEELILSGADVIKVGIGPGSVCTTR-LKTGVGYPQFSAVLECADAAHGLGGHIIS 280 (671)
Q Consensus 226 ~a~~li~aGAdgvkVG~~~~~~~~Tr-~V~gv~~~~~~~~~~~~~~~~~~~~~~~~ 280 (671)
-+..+-++|||.+|.+.-- .-||. .-.|.| ........++++++|.++++
T Consensus 57 ~a~~~k~~ga~~~k~~~~k--prts~~~f~g~g---~~gl~~l~~~~~~~Gl~~~t 107 (276)
T 1vs1_A 57 AALAVKEAGAHMLRGGAFK--PRTSPYSFQGLG---LEGLKLLRRAGDEAGLPVVT 107 (276)
T ss_dssp HHHHHHHHTCSEEECBSSC--CCSSTTSCCCCT---HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhCCCEEEeEEEe--CCCChhhhcCCC---HHHHHHHHHHHHHcCCcEEE
Confidence 3445557999999988522 11111 012333 34444555666666555444
No 332
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=46.70 E-value=18 Score=37.19 Aligned_cols=86 Identities=17% Similarity=0.169 Sum_probs=0.0
Q ss_pred eEEEc----------cCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEccccccccccccccccccc
Q psy3862 358 FTTIH----------KYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEY 427 (671)
Q Consensus 358 lgvih----------r~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~ 427 (671)
+|+|+ ++.++++..+.. .+++++|||+|-|.+.+..-.........+++
T Consensus 18 mGilN~TpdSFsdgg~~~~~~~a~~~a---------------------~~~v~~GAdiIDIGgestrPga~~v~~~eE~~ 76 (282)
T 1aj0_A 18 MGILNVTPDSFSDGGTHNSLIDAVKHA---------------------NLMINAGATIIDVGGESTRPGAAEVSVEEELQ 76 (282)
T ss_dssp EEEEECCTTTSCCCCCCTHHHHHHHHH---------------------HHHHHHTCSEEEEESSCCSTTCCCCCHHHHHH
T ss_pred EEEEeCCCCccccccccCCHHHHHHHH---------------------HHHHHCCCCEEEECCCcCCCCCCcCCHHHHHH
Q ss_pred cccccccccccccCceeeccccCchhHHH-HHHcCCcEE
Q psy3862 428 MFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFV 465 (671)
Q Consensus 428 ~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V 465 (671)
...|.++.+++.. ++.+-=--...++++ ++++||+.|
T Consensus 77 rv~pvi~~l~~~~-~~piSIDT~~~~va~aAl~aGa~iI 114 (282)
T 1aj0_A 77 RVIPVVEAIAQRF-EVWISVDTSKPEVIRESAKVGAHII 114 (282)
T ss_dssp HHHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhhc-CCeEEEeCCCHHHHHHHHHcCCCEE
No 333
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=46.15 E-value=69 Score=37.20 Aligned_cols=39 Identities=26% Similarity=0.212 Sum_probs=26.5
Q ss_pred HHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCC
Q psy3862 224 GEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGG 276 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~ 276 (671)
.+.++.+.++|+|.++|-.. | + .+.-+.++.+++++.|.
T Consensus 200 ~~~i~~a~~~Gvd~irIf~s----~-n---------~l~~l~~~i~~ak~~G~ 238 (718)
T 3bg3_A 200 FKFCEVAKENGMDVFRVFDS----L-N---------YLPNMLLGMEAAGSAGG 238 (718)
T ss_dssp HHHHHHHHHHTCCEEEEECS----S-C---------CHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHhcCcCEEEEEec----H-H---------HHHHHHHHHHHHHHcCC
Confidence 67788899999999999842 1 1 23455566666666553
No 334
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=46.05 E-value=10 Score=40.62 Aligned_cols=62 Identities=11% Similarity=0.085 Sum_probs=41.3
Q ss_pred HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEEEc
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-AdgvkVG 241 (671)
.+.++.|.++|+|+|.+-...-.. +.++. . +..++ .+| ..|++ |.+.+..+++.| ||.|-+|
T Consensus 269 ~~la~~l~~~Gvd~i~v~~~~~~~------~~~~~-~-~~~ir~~~~iPvi~~G~i-t~~~a~~~l~~g~aD~V~ig 336 (379)
T 3aty_A 269 KHLCKKIEPLSLAYLHYLRGDMVN------QQIGD-V-VAWVRGSYSGVKISNLRY-DFEEADQQIREGKVDAVAFG 336 (379)
T ss_dssp HHHHHHHGGGCCSEEEEECSCTTS------CCCCC-H-HHHHHTTCCSCEEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHhCCCEEEEcCCCcCC------CCccH-H-HHHHHHHCCCcEEEECCC-CHHHHHHHHHcCCCeEEEec
Confidence 356778889999999774421000 01111 2 22332 246 68899 999999999998 9999777
No 335
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=46.03 E-value=8.9 Score=38.72 Aligned_cols=45 Identities=13% Similarity=0.198 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHHh----CCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 145 QTFVDFVRRIREM----YPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 145 ~~~~~~ik~lr~~----~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
...++.++++|+. .++..+.+....+.+.++.+.++|||++++++
T Consensus 176 ~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~GS 224 (246)
T 3inp_A 176 PAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGS 224 (246)
T ss_dssp TTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEESH
T ss_pred hHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEeh
Confidence 4456666666542 34444544444457899999999999999854
No 336
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=45.50 E-value=16 Score=36.38 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=57.2
Q ss_pred HHHHHHHcCCeEE-eecCC---CHHHHHHhhhcCcccccceEEecCCChhhHHHHHHHHHhCCCceEEE---eeccCC--
Q psy3862 72 MAKHLAKHGLFTT-IHKYY---TLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYIC---LDVANG-- 142 (671)
Q Consensus 72 lA~Ala~~gglgv-Ih~n~---~~Eeq~~~i~~~p~~~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Iv---ld~a~G-- 142 (671)
....++++|.=++ +|.-. .+++..+.+++.- ..--+.++++.+. ++++.++. .+|.+. ++...|
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G-~k~gv~lnp~tp~---~~~~~~l~---~~D~VlvmsV~pGfggQ 144 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETINGQAFRLIDEIRRHD-MKVGLILNPETPV---EAMKYYIH---KADKITVMTVDPGFAGQ 144 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTT-CEEEEEECTTCCG---GGGTTTGG---GCSEEEEESSCTTCSSC
T ss_pred HHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcC-CeEEEEEECCCcH---HHHHHHHh---cCCEEEEeeeccCcCCc
Confidence 4455667775555 67543 2444444443321 1101223444433 33333333 345553 333222
Q ss_pred -CChHHHHHHHHHHHhC----CCceEEEEEeccHHHHHHHHHCCCcEEEEC
Q psy3862 143 -YTQTFVDFVRRIREMY----PKHVIIAGNVVTGEMVEELILSGADVIKVG 188 (671)
Q Consensus 143 -~~~~~~~~ik~lr~~~----P~~~li~g~v~t~e~a~~Li~AGaD~IvVd 188 (671)
......+.++++|+.. ....+.+....+.+.+..+.++|||+++++
T Consensus 145 ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 145 PFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVG 195 (231)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEEC
T ss_pred cccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEEc
Confidence 1345566666665432 234444444456788999999999999986
No 337
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=45.13 E-value=1.4e+02 Score=30.95 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=66.9
Q ss_pred HHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCC-CceEEEEEecc----HHHHHHHHHCCCcEEEECcC-CCc
Q psy3862 122 LKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYP-KHVIIAGNVVT----GEMVEELILSGADVIKVGIG-PGS 193 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P-~~~li~g~v~t----~e~a~~Li~AGaD~IvVdga-~G~ 193 (671)
++.+.+. +++.+.+....|. +..+.++++.+++..| ...+-.-.-.| ...+.+.+++|||.|..... =|
T Consensus 155 a~~~~~~--Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG- 231 (345)
T 1nvm_A 155 GKLMESY--GATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMG- 231 (345)
T ss_dssp HHHHHHH--TCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCS-
T ss_pred HHHHHHC--CCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchhcc-
Confidence 3445555 6677777666665 5777888999888885 44433322222 35667788999999854321 11
Q ss_pred eEEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhh
Q psy3862 194 VCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAH 272 (671)
Q Consensus 194 ~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~ 272 (671)
. -+||+.+-.-+.+|-..|.+ +|+ .++.+.++++...
T Consensus 232 -------~---------------~aGN~~le~lv~~L~~~g~~-----------------~~i---dl~~l~~~~~~~~ 268 (345)
T 1nvm_A 232 -------A---------------GAGNAPLEVFIAVAERLGWN-----------------HGT---DLYTLMDAADDIV 268 (345)
T ss_dssp -------S---------------TTCBCBHHHHHHHHHHHTCB-----------------CCS---CHHHHHHHHHHTT
T ss_pred -------C---------------CccCcCHHHHHHHHHhcCCC-----------------CCC---CHHHHHHHHHHHH
Confidence 0 38999888888777765432 122 6788888887653
No 338
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=44.93 E-value=1.4e+02 Score=30.34 Aligned_cols=113 Identities=19% Similarity=0.203 Sum_probs=68.9
Q ss_pred HHHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCCceEEEEEecc----HHHHHHHHHCCCcEEEECcCC-Cc
Q psy3862 121 GLKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPKHVIIAGNVVT----GEMVEELILSGADVIKVGIGP-GS 193 (671)
Q Consensus 121 rl~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~~~li~g~v~t----~e~a~~Li~AGaD~IvVdga~-G~ 193 (671)
.++.+.+. +++.+.+....|. |..+.++++.+++.+|...+-.-.-.| ...+.+.+++|++.|.....+ |
T Consensus 161 ~~~~~~~~--Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv~GlG- 237 (298)
T 2cw6_A 161 VTKKFYSM--GCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLG- 237 (298)
T ss_dssp HHHHHHHT--TCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBTTSCC-
T ss_pred HHHHHHHc--CCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeeccccc-
Confidence 34445555 6777777666665 577788899988888754332222222 355667789999999542211 1
Q ss_pred eEEEEecccCCcchhhhhccccC-CccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhh
Q psy3862 194 VCTTRLKNKTSDFFLIQFYSCIP-QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAH 272 (671)
Q Consensus 194 ~~~t~v~~~~~~~~~i~~i~~~p-~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~ 272 (671)
.| | ..| .+||+.|-+-+..|-..|.+ +|+ .++.++++++...
T Consensus 238 ~c--------p---------~a~g~aGN~~~E~lv~~l~~~g~~-----------------~~i---dl~~l~~~~~~~~ 280 (298)
T 2cw6_A 238 GC--------P---------YAQGASGNLATEDLVYMLEGLGIH-----------------TGV---NLQKLLEAGNFIC 280 (298)
T ss_dssp CC--------T---------TSCSSCCBCBHHHHHHHHHHHTCB-----------------CCC---CHHHHHHHHHHHH
T ss_pred CC--------C---------CCCCCcCChhHHHHHHHHHhcCCC-----------------CCc---CHHHHHHHHHHHH
Confidence 01 1 113 58999998888777654322 122 5777777777665
Q ss_pred h
Q psy3862 273 G 273 (671)
Q Consensus 273 ~ 273 (671)
+
T Consensus 281 ~ 281 (298)
T 2cw6_A 281 Q 281 (298)
T ss_dssp H
T ss_pred H
Confidence 3
No 339
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=44.78 E-value=15 Score=37.77 Aligned_cols=61 Identities=18% Similarity=0.178 Sum_probs=39.4
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEe-----------------cc-------HHHHH
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNV-----------------VT-------GEMVE 175 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v-----------------~t-------~e~a~ 175 (671)
+.+..++++ +++.+.++.. ....+.++.+.+.. ..+||.+ .| .++++
T Consensus 110 ~~a~rl~ka--Ga~aVklEdg----~~~~~~i~~l~~~G---Ipv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~ 180 (275)
T 3vav_A 110 ASAVKLMRA--GAQMVKFEGG----EWLAETVRFLVERA---VPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDAR 180 (275)
T ss_dssp HHHHHHHHT--TCSEEEEECC----GGGHHHHHHHHHTT---CCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHc--CCCEEEECCc----hhHHHHHHHHHHCC---CCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHH
Confidence 456677887 8888888743 33456666665432 2233321 11 37888
Q ss_pred HHHHCCCcEEEECc
Q psy3862 176 ELILSGADVIKVGI 189 (671)
Q Consensus 176 ~Li~AGaD~IvVdg 189 (671)
++.+||||.|++.+
T Consensus 181 a~~eAGA~~ivlE~ 194 (275)
T 3vav_A 181 AVEEAGAQLIVLEA 194 (275)
T ss_dssp HHHHHTCSEEEEES
T ss_pred HHHHcCCCEEEecC
Confidence 99999999998854
No 340
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=44.61 E-value=3.2e+02 Score=33.37 Aligned_cols=163 Identities=18% Similarity=0.137 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCceEEEEEec-------------cHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcccc
Q psy3862 149 DFVRRIREMYPKHVIIAGNVV-------------TGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCI 215 (671)
Q Consensus 149 ~~ik~lr~~~P~~~li~g~v~-------------t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~ 215 (671)
++++.+++..|+..+.+-.-. ..+.++++.++|+|.+ ++-....++..+
T Consensus 613 e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~~~~~~~i~~a~~~g~d~i------------rif~sl~~~~~~------ 674 (1165)
T 2qf7_A 613 ERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVKYFVRQAAKGGIDLF------------RVFDCLNWVENM------ 674 (1165)
T ss_dssp HHHHHHHHHCTTSEEEEEEETTTBTCSSCCCHHHHHHHHHHHHHHTCCEE------------EEECTTCCGGGG------
T ss_pred HHHHHHHHHchhhHHHHHhccccccccccCCchhHHHHHHHHHhcCcCEE------------EEEeeHHHHHHH------
Q ss_pred CCccccccHHHHHHHHHcCCCEEEEcccCCC--ccccceecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccc
Q psy3862 216 PQAGNVVTGEMVEELILSGADVIKVGIGPGS--VCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDI 293 (671)
Q Consensus 216 p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~--~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 293 (671)
.+....+.+.| .-++.-+.... -|.+| +.=...-++++++++.+.|.++|+
T Consensus 675 --------~~~i~~~~~~g-~~v~~~i~~~~~~~d~~r-----~~~~~~~~~~~~~~~~~~Ga~~i~------------- 727 (1165)
T 2qf7_A 675 --------RVSMDAIAEEN-KLCEAAICYTGDILNSAR-----PKYDLKYYTNLAVELEKAGAHIIA------------- 727 (1165)
T ss_dssp --------HHHHHHHHHTT-CEEEEEEECCSCTTCTTS-----GGGCHHHHHHHHHHHHHTTCSEEE-------------
T ss_pred --------HHHHHHHHhcc-ceEEEEEEEeccccCCCC-----CCCCHHHHHHHHHHHHHcCCCEEE-------------
Q ss_pred cCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHHH
Q psy3862 294 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAF 373 (671)
Q Consensus 294 ~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~~ 373 (671)
T Consensus 728 -------------------------------------------------------------------------------- 727 (1165)
T 2qf7_A 728 -------------------------------------------------------------------------------- 727 (1165)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Q ss_pred HhcCcccccceeeeccc-ChhhHHHH---HHcCCcEEEEccccccccccccccccccccccccccccccccCceeecccc
Q psy3862 374 AVQNPDVIKHVADGGCT-SPGDVAKA---MGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCT 449 (671)
Q Consensus 374 v~~~~~~~~~v~~~~~~-~~~~~~~l---~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v 449 (671)
+.+..|. .|.++..+ +..-+++-+ ..|.|...-+-+
T Consensus 728 ----------l~DT~G~~~P~~~~~lv~~l~~~~~~~i---~~H~Hnd~GlAv--------------------------- 767 (1165)
T 2qf7_A 728 ----------VKDMAGLLKPAAAKVLFKALREATGLPI---HFHTHDTSGIAA--------------------------- 767 (1165)
T ss_dssp ----------EEETTCCCCHHHHHHHHHHHHHHCSSCE---EEEECBTTSCHH---------------------------
T ss_pred ----------EeCccCCcCHHHHHHHHHHHHHhcCCeE---EEEECCCCCHHH---------------------------
Q ss_pred CchhHHHHHHcCCcEEEECccccCCccCCCc
Q psy3862 450 SPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 480 (671)
Q Consensus 450 ~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~ 480 (671)
.+.-.++++|||.|=.-+ .|-+.|++.
T Consensus 768 --An~laAv~aGa~~vd~ti--~GlGe~~Gn 794 (1165)
T 2qf7_A 768 --ATVLAAVEAGVDAVDAAM--DALSGNTSQ 794 (1165)
T ss_dssp --HHHHHHHHTTCSEEEEBC--GGGCSBTSC
T ss_pred --HHHHHHHHhCCCEEEecc--cccCCCccc
No 341
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=44.51 E-value=15 Score=38.39 Aligned_cols=66 Identities=27% Similarity=0.369 Sum_probs=34.6
Q ss_pred HHHHHcCCcEEEEcccc--ccccccccccccccccccccccccccccCc-e-eeccccCchhHHH-HHHcCCcEEE
Q psy3862 396 AKAMGAGADFVMLGGMF--AGHDQSGGELTNIEYMFFPLVGDMNSYLGG-V-VDGGCTSPGDVAK-AMGAGADFVM 466 (671)
Q Consensus 396 ~~l~~aG~d~i~id~~a--~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-i~gG~v~t~~~a~-~l~aGAd~V~ 466 (671)
.+++++|||+|=|.+-+ .|.. .+....++++..|.++.+++...- + |+ -...++++ ++++||+.|-
T Consensus 40 ~~~v~~GAdIIDIGgeSTrPGa~--~v~~~eE~~Rv~pvI~~l~~~~~vpiSID---T~~~~Va~aAl~aGa~iIN 110 (314)
T 2vef_A 40 RKLIAEGASMLDIGGESTRPGSS--YVEIEEEIQRVVPVIKAIRKESDVLISID---TWKSQVAEAALAAGADLVN 110 (314)
T ss_dssp HHHHHTTCSEEEEECCC-----C--HHHHHHHHHHHHHHHHHHHHHCCCEEEEE---CSCHHHHHHHHHTTCCEEE
T ss_pred HHHHHCCCCEEEECCCcCCCCCC--CCCHHHHHHHHHHHHHHHHhhCCceEEEe---CCCHHHHHHHHHcCCCEEE
Confidence 44578899999887533 2321 112223444455555555543221 1 12 24455666 6889998873
No 342
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=44.47 E-value=1.1e+02 Score=31.01 Aligned_cols=168 Identities=18% Similarity=0.106 Sum_probs=0.0
Q ss_pred ccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHH-HHHhhhcCCcchhhhhhccceeeccccCCCcee
Q psy3862 222 VTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLEC-ADAAHGLGGHIISFLTAMAQKIINDIKLDFKDV 300 (671)
Q Consensus 222 ~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDV 300 (671)
+..+-+..+++.|+||+-+. +||-|-...-.-.-..+.+. .+++.++
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~------GttGE~~~Ls~~Er~~v~~~~~~~~~gr-------------------------- 69 (292)
T 2vc6_A 22 ALHDLVEWQIEEGSFGLVPC------GTTGESPTLSKSEHEQVVEITIKTANGR-------------------------- 69 (292)
T ss_dssp HHHHHHHHHHHTTCSEEETT------SGGGTGGGSCHHHHHHHHHHHHHHHTTS--------------------------
T ss_pred HHHHHHHHHHHcCCCEEEEC------ccccChhhCCHHHHHHHHHHHHHHhCCC--------------------------
Q ss_pred eeecCCCccCCCCcccceeeeeeccCCceeeCcceE--ecCCCCCCCHHHHHHHHHcC--CeEEEccCC---CHHHHHHH
Q psy3862 301 MLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPII--AANMDTVGTFEMAKHLAKHG--LFTTIHKYY---TLEEWKAF 373 (671)
Q Consensus 301 ll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiI--aa~MDtV~~~~mA~~la~~G--glgvihr~~---~~e~~~~~ 373 (671)
+||| ....+|--.-++|+...+.| ++-++.-+| +.+++.++
T Consensus 70 --------------------------------~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~ 117 (292)
T 2vc6_A 70 --------------------------------VPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQH 117 (292)
T ss_dssp --------------------------------SCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred --------------------------------CcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHH
Q ss_pred HhcCccc--cccee------eecccChhhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCceee
Q psy3862 374 AVQNPDV--IKHVA------DGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVD 445 (671)
Q Consensus 374 v~~~~~~--~~~v~------~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 445 (671)
.+++-+. ++.+- .....+++.+.+|.+.--+++-|- -+.|.-.+..+++......|..+
T Consensus 118 f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK-~s~gd~~~~~~~~~~~~~~f~v~------------ 184 (292)
T 2vc6_A 118 FKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVX-DATGNLLRPSLERMACGEDFNLL------------ 184 (292)
T ss_dssp HHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEE-ECSCCTHHHHHHHHHSCTTSEEE------------
T ss_pred HHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEEe-cCCCCHHHHHHHHHHcCCCEEEE------------
Q ss_pred ccccCchhHHHHHHcCCcEEEEC
Q psy3862 446 GGCTSPGDVAKAMGAGADFVMLG 468 (671)
Q Consensus 446 gG~v~t~~~a~~l~aGAd~V~vG 468 (671)
.|. +......+..|+++++-|
T Consensus 185 ~G~--d~~~~~~l~~G~~G~is~ 205 (292)
T 2vc6_A 185 TGE--DGTALGYMAHGGHGCISV 205 (292)
T ss_dssp ESC--GGGHHHHHHTTCCEEEES
T ss_pred ECc--hHHHHHHHHcCCCEEEec
No 343
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=44.18 E-value=49 Score=34.78 Aligned_cols=71 Identities=15% Similarity=0.268 Sum_probs=42.4
Q ss_pred ChhhHHHHHHHHHhCCCceEEEeeccC-------CCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCC-CcEEE
Q psy3862 115 SAKDLAGLKEILAALPEIEYICLDVAN-------GYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSG-ADVIK 186 (671)
Q Consensus 115 ~~~d~~rl~~l~~a~~~~d~Ivld~a~-------G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AG-aD~Iv 186 (671)
+.++...+.+.++.. ++++.+.... ..+....+.++.+|+..+...+.+|.+.+.+.++++++.| +|+|-
T Consensus 228 ~~~~~~~~a~~l~~~--vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~ 305 (343)
T 3kru_A 228 NIDMMVEYINMIKDK--VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVA 305 (343)
T ss_dssp CHHHHHHHHHHHTTT--CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEE
T ss_pred cHHHHHHHHHHhhcc--ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHH
Confidence 344444444455543 6777664211 0112235566666665543344555677899999999998 99995
Q ss_pred E
Q psy3862 187 V 187 (671)
Q Consensus 187 V 187 (671)
+
T Consensus 306 i 306 (343)
T 3kru_A 306 L 306 (343)
T ss_dssp E
T ss_pred H
Confidence 5
No 344
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=43.99 E-value=57 Score=30.62 Aligned_cols=124 Identities=18% Similarity=0.138 Sum_probs=63.1
Q ss_pred CcceEecCCCCCCCHHHHHHHHHcCCeEEEccC--CCHHHHHHHHhcC--cccc-c-----------ceeeeccc-----
Q psy3862 332 GVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKY--YTLEEWKAFAVQN--PDVI-K-----------HVADGGCT----- 390 (671)
Q Consensus 332 ~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~--~~~e~~~~~v~~~--~~~~-~-----------~v~~~~~~----- 390 (671)
.+|++...-+ .+.+...-+.|..+++.|. .+.++..+.+.+. .+.+ . .+...++.
T Consensus 55 ~i~vi~~~~~----~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~v~~~~g~~~~~~ 130 (237)
T 3cwo_X 55 KIIVCSAMGQ----QAMVIEAIKAGAKDFIVNTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGI 130 (237)
T ss_dssp CEEEECCSST----HHHHHHHHHTTCCEEEESHHHHHCTHHHHHHHHHHTGGGEEEEEEEEESSSCEEEEETTTTEEEEE
T ss_pred CEEEEECCCC----HHHHHHHHHCCHHheEeCCcccChHHHHHHHHHHhCCCceEEEeeecccCCcEEEEEeCCcccccc
Confidence 5888875433 7788888899999999885 2333444444321 1101 0 00001111
Q ss_pred Chhh-HHHHHHcCCcEEEEccc-cccccc-ccccccccccc--ccccccccccccCceeeccccCchhHHHHHHcCCcEE
Q psy3862 391 SPGD-VAKAMGAGADFVMLGGM-FAGHDQ-SGGELTNIEYM--FFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFV 465 (671)
Q Consensus 391 ~~~~-~~~l~~aG~d~i~id~~-a~gh~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V 465 (671)
+..+ ..++...|+..+.+.+. ..|... ...+.+..++. ..|. +..+|.-.+.+..+.+++|||++
T Consensus 131 ~~~~~i~~~~~~~~~~vli~~~~~~g~~~g~~~~~i~~~~~~~~~Pv----------ia~~g~~~~~~~~~~~~~G~~~~ 200 (237)
T 3cwo_X 131 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPI----------IASGGAGKMEHFLEAFLAGADAA 200 (237)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTCCSCCCHHHHHHHGGGCCSCE----------EEESCCCSHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHhhcCCCeEEEEecCCCCccccccHHHHHHHHHhcCCCE----------EecCCCCCHHHHHHHHHcCcHHH
Confidence 1223 34445678875554433 223211 11222222221 1222 23455544566677789999999
Q ss_pred EECc
Q psy3862 466 MLGG 469 (671)
Q Consensus 466 ~vG~ 469 (671)
++|.
T Consensus 201 ~vg~ 204 (237)
T 3cwo_X 201 LAAS 204 (237)
T ss_dssp EESH
T ss_pred hhhH
Confidence 9995
No 345
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=43.26 E-value=12 Score=37.65 Aligned_cols=24 Identities=29% Similarity=0.393 Sum_probs=23.0
Q ss_pred CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 217 QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 217 ~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
++|||-|.++++++.+ |||++-||
T Consensus 191 vGfGI~~~e~a~~~~~-gAD~VVVG 214 (235)
T 3w01_A 191 YGGGISSEQQATEMAA-IADTIIVG 214 (235)
T ss_dssp EESCCCSHHHHHHHHT-TSSEEEEC
T ss_pred EECCcCCHHHHHHHHc-CCCEEEEC
Confidence 7999999999999888 99999999
No 346
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=43.24 E-value=43 Score=32.83 Aligned_cols=72 Identities=19% Similarity=0.207 Sum_probs=42.1
Q ss_pred cCCChhhHHH-HHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhC--CCceEEEEEeccHHHHHHHHHCCCcEE
Q psy3862 112 SGISAKDLAG-LKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMY--PKHVIIAGNVVTGEMVEELILSGADVI 185 (671)
Q Consensus 112 ~G~~~~d~~r-l~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~--P~~~li~g~v~t~e~a~~Li~AGaD~I 185 (671)
.+.+.++..+ .+.+.++ ++|++..+..........+.++.+++.. +...+.+|.+.+.+.+.+++++|||.|
T Consensus 127 ~~l~~~~~~~~a~~a~ea--Gad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 127 PYLNEEEIKKAVEICIEA--GADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp GGCCHHHHHHHHHHHHHH--TCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCCCHHHHHHHHHHHHHh--CCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHH
Confidence 3455555443 3445566 7898865542211111223444444332 333456677889999999999999976
No 347
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=42.69 E-value=51 Score=33.48 Aligned_cols=70 Identities=19% Similarity=0.155 Sum_probs=43.6
Q ss_pred CChhhHHHHHHH-HHhCCCceEEEeeccCCCChHHHHHHHHHHHh--CCCceEEEEEeccHHHHHHHHHCCCcEE
Q psy3862 114 ISAKDLAGLKEI-LAALPEIEYICLDVANGYTQTFVDFVRRIREM--YPKHVIIAGNVVTGEMVEELILSGADVI 185 (671)
Q Consensus 114 ~~~~d~~rl~~l-~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~--~P~~~li~g~v~t~e~a~~Li~AGaD~I 185 (671)
++.+++.++.++ +++ ++|+|--.+.++.....++-++-+++. .+...+.+|.+.|.+++.+++++||+-|
T Consensus 170 Lt~eei~~A~~ia~ea--GADfVKTSTGf~~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~Ri 242 (260)
T 3r12_A 170 LDTEEKIAACVISKLA--GAHFVKTSTGFGTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRI 242 (260)
T ss_dssp CCHHHHHHHHHHHHHT--TCSEEECCCSSSSCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHh--CcCEEEcCCCCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 454555454443 455 788886665432212222333333332 3556788899999999999999999988
No 348
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=41.96 E-value=1.3e+02 Score=30.44 Aligned_cols=113 Identities=18% Similarity=0.249 Sum_probs=68.0
Q ss_pred HHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCCceEE--EEEe--ccHHHHHHHHHCCCcEEEECcCCCceE
Q psy3862 122 LKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPKHVII--AGNV--VTGEMVEELILSGADVIKVGIGPGSVC 195 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~~~li--~g~v--~t~e~a~~Li~AGaD~IvVdga~G~~~ 195 (671)
++.+.+. +++.+.+...+|. |....++++.+++..|...+. +-|. ...+.+.+.+++|++.|.+...+=..|
T Consensus 161 ~~~~~~~--G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~sv~GlG~c 238 (295)
T 1ydn_A 161 TEQLFSL--GCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASVGGLGGC 238 (295)
T ss_dssp HHHHHHH--TCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEBTTCCSCB
T ss_pred HHHHHhc--CCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEeccccCCCC
Confidence 3444555 6778877767775 566778888888777743332 2121 123567778899999986533220001
Q ss_pred EEEecccCCcchhhhhccccC-CccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhh
Q psy3862 196 TTRLKNKTSDFFLIQFYSCIP-QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHG 273 (671)
Q Consensus 196 ~t~v~~~~~~~~~i~~i~~~p-~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~ 273 (671)
| ..| .+||+.+-+-+..|-..|.+ +|+ .++.++++++...+
T Consensus 239 --------p---------~a~g~~GN~~~e~lv~~l~~~g~~-----------------~~i---d~~~l~~~~~~~~~ 280 (295)
T 1ydn_A 239 --------P---------FAPGAKGNVDTVAVVEMLHEMGFE-----------------TGL---DLDRLRSAGLFTQA 280 (295)
T ss_dssp --------T---------TBTTSCCBCBHHHHHHHHHHTTCB-----------------CCC---CHHHHHHHHHHHHH
T ss_pred --------C---------CCCCCcCChhHHHHHHHHHhcCCC-----------------CCc---CHHHHHHHHHHHHH
Confidence 0 123 58999998888776654322 122 56777777766543
No 349
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=41.93 E-value=75 Score=35.61 Aligned_cols=90 Identities=21% Similarity=0.214 Sum_probs=56.5
Q ss_pred HHHHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCC-CceEEEEEecc----HHHHHHHHHCCCcEEEECcCCC
Q psy3862 120 AGLKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYP-KHVIIAGNVVT----GEMVEELILSGADVIKVGIGPG 192 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P-~~~li~g~v~t----~e~a~~Li~AGaD~IvVdga~G 192 (671)
+.++++.+. +++.|.+....|. +..+.++++.+++.+| ...+-.-.-.| ...+.+.++||||.|.....+
T Consensus 179 ~~a~~l~~~--Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ti~g- 255 (539)
T 1rqb_A 179 KLAGQLLDM--GADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDTAISS- 255 (539)
T ss_dssp HHHHHHHHT--TCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEEBCGG-
T ss_pred HHHHHHHHc--CCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccc-
Confidence 345566666 7788888766665 5677888888888776 43332222222 356677889999999432211
Q ss_pred ceEEEEecccCCcchhhhhccccCCccccccHHHHHHHHHc
Q psy3862 193 SVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILS 233 (671)
Q Consensus 193 ~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~a 233 (671)
+. +-+||+.+-.-+.+|-..
T Consensus 256 ------~G---------------ertGN~~lE~lv~~L~~~ 275 (539)
T 1rqb_A 256 ------MS---------------LGPGHNPTESVAEMLEGT 275 (539)
T ss_dssp ------GC---------------STTSBCBHHHHHHHTTTS
T ss_pred ------cC---------------CCccChhHHHHHHHHHhc
Confidence 00 137888887777666543
No 350
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=41.64 E-value=33 Score=35.45 Aligned_cols=55 Identities=25% Similarity=0.244 Sum_probs=35.9
Q ss_pred HHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc--ccC--Ccccccc-H----HHHHHHHHcCCCEEEEc
Q psy3862 173 MVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS--CIP--QAGNVVT-G----EMVEELILSGADVIKVG 241 (671)
Q Consensus 173 ~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~--~~p--~aGnV~t-~----~~a~~li~aGAdgvkVG 241 (671)
.++...++|||+|+..-. + ..+. +.+. .+| +.||+.+ . +.++.++++||+|+-||
T Consensus 194 aariA~elGAD~VKt~~t-~-----------e~~~--~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vG 257 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTYYV-E-----------KGFE--RIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMG 257 (295)
T ss_dssp HHHHHHHTTCSEEEEECC-T-----------TTHH--HHHHTCSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHhCCCEEEeCCC-H-----------HHHH--HHHHhCCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeH
Confidence 567778999999976411 1 0111 1111 245 6888874 3 46778889999999888
No 351
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=41.49 E-value=28 Score=36.39 Aligned_cols=69 Identities=22% Similarity=0.289 Sum_probs=36.3
Q ss_pred HHHHHcCCcEEEEcccc--cccc--ccccccccccccccccccccccccCceeeccccCchhHHH-HHHcCCcEE
Q psy3862 396 AKAMGAGADFVMLGGMF--AGHD--QSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAK-AMGAGADFV 465 (671)
Q Consensus 396 ~~l~~aG~d~i~id~~a--~gh~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~-~l~aGAd~V 465 (671)
.+++++|||+|-|.+-+ .|.. ...+....++++..|.++.+++...-.| -=--...++++ ++++|||.|
T Consensus 56 ~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpI-SIDT~~~~Va~aAl~aGa~iI 129 (314)
T 3tr9_A 56 EKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLI-SVDTSRPRVMREAVNTGADMI 129 (314)
T ss_dssp HHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEE-EEECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeE-EEeCCCHHHHHHHHHcCCCEE
Confidence 45688999999988532 2322 0022223344445555555554432111 10123455666 689999977
No 352
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=40.94 E-value=34 Score=36.43 Aligned_cols=61 Identities=13% Similarity=0.219 Sum_probs=40.2
Q ss_pred cHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcc---ccCCcccc-ccHHHHHHHHHcCCCEEEEc
Q psy3862 170 TGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYS---CIPQAGNV-VTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 170 t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~---~~p~aGnV-~t~~~a~~li~aGAdgvkVG 241 (671)
|.+++++|.++|+|.|.+..-.-. +...++.|+ .+|+.+-+ -+++-+..++++|+|.+|+-
T Consensus 48 tv~Qi~~l~~aG~diVRvavp~~~-----------~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklRIN 112 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRVAVPHKE-----------DVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRIN 112 (366)
T ss_dssp HHHHHHHHHHTTCCEEEEECCSHH-----------HHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEeCCCChH-----------HHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEEEC
Confidence 457778899999999977321100 001111121 35666666 68999999999999998876
No 353
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=40.93 E-value=16 Score=37.65 Aligned_cols=66 Identities=12% Similarity=0.126 Sum_probs=30.4
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHh---CCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREM---YPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~---~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
+++.+.+++ ++|+|-+|.. .++.+.+.++.++.. +|...+++....+.+.++.+.++|||.|.+.+
T Consensus 210 ee~~~A~~a--GaD~I~ld~~--~~~~l~~~v~~l~~~~~g~~~v~I~ASGGIt~~ni~~~~~~GvD~i~vGs 278 (294)
T 3c2e_A 210 DEATEAIEA--GADVIMLDNF--KGDGLKMCAQSLKNKWNGKKHFLLECSGGLNLDNLEEYLCDDIDIYSTSS 278 (294)
T ss_dssp HHHHHHHHH--TCSEEECCC-----------------------CCEEEEECCCCC------CCCSCSEEECGG
T ss_pred HHHHHHHHc--CCCEEEECCC--CHHHHHHHHHHhcccccCCCCeEEEEECCCCHHHHHHHHHcCCCEEEEec
Confidence 455556666 7788888753 234444444444333 35566665555599999999999999997754
No 354
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=40.83 E-value=1e+02 Score=31.78 Aligned_cols=113 Identities=18% Similarity=0.165 Sum_probs=67.6
Q ss_pred HHHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCCceEEEEEecc----HHHHHHHHHCCCcEEEECcCCCce
Q psy3862 121 GLKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPKHVIIAGNVVT----GEMVEELILSGADVIKVGIGPGSV 194 (671)
Q Consensus 121 rl~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~~~li~g~v~t----~e~a~~Li~AGaD~IvVdga~G~~ 194 (671)
.++.+.+. +++.|.+....|. |..+.++++.+++.+|...+-.-.-.| ...+.+.+++|||.|.....+=..
T Consensus 162 ~~~~~~~~--Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGe 239 (307)
T 1ydo_A 162 LSEALFEF--GISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGG 239 (307)
T ss_dssp HHHHHHHH--TCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBGGGCCE
T ss_pred HHHHHHhc--CCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEcccccCC
Confidence 34555666 6677777666665 577788899988878754432222122 356667889999999543321000
Q ss_pred EEEEecccCCcchhhhhccccC-CccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhh
Q psy3862 195 CTTRLKNKTSDFFLIQFYSCIP-QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAH 272 (671)
Q Consensus 195 ~~t~v~~~~~~~~~i~~i~~~p-~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~ 272 (671)
| | .-| .+||+.|-+-+..|-..|.+ +|+ .++.++++++...
T Consensus 240 c--------p---------~a~graGN~~~E~lv~~L~~~g~~-----------------t~i---dl~~L~~~~~~v~ 281 (307)
T 1ydo_A 240 C--------P---------YAPGSSGNAATEDIVYMLEQMDIK-----------------TNV---KLEKLLSAAKWIE 281 (307)
T ss_dssp E--------T---------TEEEEECBCBHHHHHHHHHHTTCB-----------------CCC---CHHHHHHHHHHHH
T ss_pred C--------C---------CCCCCCCChhHHHHHHHHHhcCCC-----------------CCc---CHHHHHHHHHHHH
Confidence 1 0 002 48999988888776654321 122 5677777776654
No 355
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=40.75 E-value=75 Score=31.96 Aligned_cols=70 Identities=16% Similarity=0.134 Sum_probs=42.1
Q ss_pred EEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccccC---CccccccHHHHHHHHHcCCCEEE
Q psy3862 165 AGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIP---QAGNVVTGEMVEELILSGADVIK 239 (671)
Q Consensus 165 ~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p---~aGnV~t~~~a~~li~aGAdgvk 239 (671)
..++.+++.++.+..+|+|+|.+|..|+-.....+.. .+...+.....+ +-+ .+....++++++|+++|.
T Consensus 23 ~~~~~~p~~~e~a~~~GaD~v~lDlE~~~~~~~~~~~---~~~a~~~~~~~~~VRv~~--~~~~~i~~~l~~g~~~I~ 95 (267)
T 2vws_A 23 WLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYH---QLQAVAPYASQPVIRPVE--GSKPLIKQVLDIGAQTLL 95 (267)
T ss_dssp EECSCCHHHHHHHHTTCCSEEEEETTTSCCCHHHHHH---HHHHHTTSSSEEEEECSS--CCHHHHHHHHHTTCCEEE
T ss_pred EEeCCCHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHH---HHHHHHhCCCcEEEEeCC--CCHHHHHHHHHhCCCEEE
Confidence 4467789999999999999999999887431000000 000000000000 222 367889999999998764
No 356
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=40.36 E-value=2.1e+02 Score=29.63 Aligned_cols=131 Identities=15% Similarity=0.090 Sum_probs=71.3
Q ss_pred HHHHHHHHhCCCceEEEeeccC-----CCC--------hHHHHHHHHHHHhCCCceEEEEEec--------cHHHHHHHH
Q psy3862 120 AGLKEILAALPEIEYICLDVAN-----GYT--------QTFVDFVRRIREMYPKHVIIAGNVV--------TGEMVEELI 178 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~-----G~~--------~~~~~~ik~lr~~~P~~~li~g~v~--------t~e~a~~Li 178 (671)
+-++.++++ ++..+.++..- ||. +...++|+..++..+...+++-.-. ..++++++.
T Consensus 108 ~~v~~l~~a--Gaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~ 185 (305)
T 3ih1_A 108 RTAVEMVEA--KVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYV 185 (305)
T ss_dssp HHHHHHHHT--TCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHh--CCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHH
Confidence 345666776 88888886542 231 3556666666665554444443221 348899999
Q ss_pred HCCCcEEEECcCCCceEEEEecccCCcchhhhhccccC-----CccccccHHHHHHHHHcCCCEEEEcccCCCcccccee
Q psy3862 179 LSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIP-----QAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLK 253 (671)
Q Consensus 179 ~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p-----~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V 253 (671)
+||||+|.+.+-+--...+++.+.+ .+| ..+|....-....|-++|..-|-.|.
T Consensus 186 eAGAD~i~~e~~~~~~~~~~i~~~~----------~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~----------- 244 (305)
T 3ih1_A 186 KAGADAIFPEALQSEEEFRLFNSKV----------NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPV----------- 244 (305)
T ss_dssp HHTCSEEEETTCCSHHHHHHHHHHS----------CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECS-----------
T ss_pred HcCCCEEEEcCCCCHHHHHHHHHHc----------CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEch-----------
Confidence 9999999996543100011111111 123 23332222236778888988886661
Q ss_pred cccCcchhhhHHHHHHHhhhc
Q psy3862 254 TGVGYPQFSAVLECADAAHGL 274 (671)
Q Consensus 254 ~gv~~~~~~~~~~~~~~~~~~ 274 (671)
..-+....|+.++++.-++.
T Consensus 245 -~~~raa~~a~~~~~~~i~~~ 264 (305)
T 3ih1_A 245 -TSLRVAAKAYENVFTLIKET 264 (305)
T ss_dssp -HHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHhc
Confidence 11234455666666555443
No 357
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=39.70 E-value=1e+02 Score=29.41 Aligned_cols=108 Identities=17% Similarity=0.141 Sum_probs=57.3
Q ss_pred CCCCCCHHH-HHHHHHcCCeE-EEccCCCHHHHHHHHhcCcccccceeeecccC--------hhhH---HHH-HHcCCcE
Q psy3862 340 MDTVGTFEM-AKHLAKHGLFT-TIHKYYTLEEWKAFAVQNPDVIKHVADGGCTS--------PGDV---AKA-MGAGADF 405 (671)
Q Consensus 340 MDtV~~~~m-A~~la~~Gglg-vihr~~~~e~~~~~v~~~~~~~~~v~~~~~~~--------~~~~---~~l-~~aG~d~ 405 (671)
||.+.+++. +..+.+.|.=. .+|-+...+- .+.+++.. -+..-..++ .+.+ ..+ ++.|+|-
T Consensus 61 ~DI~~t~~~~v~~~~~~Gad~vtvh~~~g~~~-i~~~~~~~----gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G 135 (208)
T 2czd_A 61 ADIPNTNRLIARKVFGAGADYVIVHTFVGRDS-VMAVKELG----EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFG 135 (208)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEESTTCHHH-HHHHHTTS----EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSE
T ss_pred CchHHHHHHHHHHHHhcCCCEEEEeccCCHHH-HHHHHHhC----CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcE
Confidence 677666654 45777887643 4887777654 44443321 111111111 1112 222 6789998
Q ss_pred EEEccccccccccccccccccccccccccccccccC---ceeeccccCch-hHHHHHHcCCcEEEECc
Q psy3862 406 VMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLG---GVVDGGCTSPG-DVAKAMGAGADFVMLGG 469 (671)
Q Consensus 406 i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~gG~v~t~-~~a~~l~aGAd~V~vG~ 469 (671)
+++.. + ..+-++. +++.++ -+++||+-..+ +..+++++|||.+.+|.
T Consensus 136 ~~~~~----~---~~~~i~~----------lr~~~~~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr 186 (208)
T 2czd_A 136 VIAPG----T---RPERIGY----------IRDRLKEGIKILAPGIGAQGGKAKDAVKAGADYIIVGR 186 (208)
T ss_dssp EECCC----S---STHHHHH----------HHHHSCTTCEEEECCCCSSTTHHHHHHHHTCSEEEECH
T ss_pred EEECC----C---ChHHHHH----------HHHhCCCCeEEEECCCCCCCCCHHHHHHcCCCEEEECh
Confidence 87641 1 1111111 222222 15688864433 66778899999999885
No 358
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=39.59 E-value=88 Score=32.25 Aligned_cols=70 Identities=16% Similarity=0.189 Sum_probs=45.5
Q ss_pred CChhhHHHHHH-HHHhCCCceEEEeeccC---CCChHHHHHHHHHHHh--CCCceEEEEEeccHHHHHHHHHCCCcEE
Q psy3862 114 ISAKDLAGLKE-ILAALPEIEYICLDVAN---GYTQTFVDFVRRIREM--YPKHVIIAGNVVTGEMVEELILSGADVI 185 (671)
Q Consensus 114 ~~~~d~~rl~~-l~~a~~~~d~Ivld~a~---G~~~~~~~~ik~lr~~--~P~~~li~g~v~t~e~a~~Li~AGaD~I 185 (671)
++.+++.++.. .+++ ++|+|--.+.+ |-.-.-++++++..+. .+...+.+|.+.|.+++.+++++||+.|
T Consensus 185 Lt~eei~~A~~ia~ea--GADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 185 LTADEIIAGCVLSSLA--GADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERL 260 (288)
T ss_dssp CCHHHHHHHHHHHHHT--TCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHc--CCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 34444444433 3455 78888665432 2223345666665432 3556788889999999999999999988
No 359
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=38.99 E-value=31 Score=33.73 Aligned_cols=31 Identities=10% Similarity=0.006 Sum_probs=25.2
Q ss_pred HHHHHHHHcCCeEEEc--cCCCHHHHHHHHhcC
Q psy3862 347 EMAKHLAKHGLFTTIH--KYYTLEEWKAFAVQN 377 (671)
Q Consensus 347 ~mA~~la~~Gglgvih--r~~~~e~~~~~v~~~ 377 (671)
.|...+-+..|+-+++ .+.++|+..+.+.+.
T Consensus 110 ~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~ 142 (215)
T 3ezx_A 110 RLVTTMLGANGFQIVDLGVDVLNENVVEEAAKH 142 (215)
T ss_dssp HHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHc
Confidence 4667788889999988 788999998888664
No 360
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=38.88 E-value=27 Score=35.82 Aligned_cols=64 Identities=16% Similarity=0.079 Sum_probs=39.0
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhC-CCc---------------eEEEEEe----ccHHHHHHHHH
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMY-PKH---------------VIIAGNV----VTGEMVEELIL 179 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~-P~~---------------~li~g~v----~t~e~a~~Li~ 179 (671)
+.+..++++ +++.+-++.. ....+.|+.+.+.. |.. .++-|.- ...++++++.+
T Consensus 99 ~na~rl~ka--Ga~aVklEdg----~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~e 172 (275)
T 1o66_A 99 AAAAELMAA--GAHMVKLEGG----VWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDD 172 (275)
T ss_dssp HHHHHHHHT--TCSEEEEECS----GGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHc--CCcEEEECCc----HHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHH
Confidence 445577776 8888888743 35567777765542 311 2233321 12478999999
Q ss_pred CCCcEEEECc
Q psy3862 180 SGADVIKVGI 189 (671)
Q Consensus 180 AGaD~IvVdg 189 (671)
||||.|++.+
T Consensus 173 AGA~~ivlE~ 182 (275)
T 1o66_A 173 AGAAVVLMEC 182 (275)
T ss_dssp TTCSEEEEES
T ss_pred cCCcEEEEec
Confidence 9999998854
No 361
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=38.86 E-value=2.7e+02 Score=26.76 Aligned_cols=108 Identities=11% Similarity=-0.013 Sum_probs=60.1
Q ss_pred CHHHHHHHHHcCCeEEE--ccCCCHHHHHHHHhcCcccccceeeecccChhhHHHHHHcCCcEEEEcccccccccccccc
Q psy3862 345 TFEMAKHLAKHGLFTTI--HKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGEL 422 (671)
Q Consensus 345 ~~~mA~~la~~Gglgvi--hr~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~ 422 (671)
+.+...++++.-++-++ |..++++...+. .. -++.+.+.....++++ .+.+..+|++.+| +..|-+-...++
T Consensus 63 ~~~~i~~~~~~~~ld~vQLHG~e~~~~~~~l-~~---~~~vika~~v~~~~~l-~~~~~~~d~~LlD-~~~gGtG~~fdW 136 (203)
T 1v5x_A 63 PPEEVLRLMEEARLQVAQLHGEEPPEWAEAV-GR---FYPVIKAFPLEGPARP-EWADYPAQALLLD-GKRPGSGEAYPR 136 (203)
T ss_dssp CHHHHHHHHHHTTCSEEEECSCCCHHHHHHH-TT---TSCEEEEEECSSSCCG-GGGGSSCSEEEEE-CSSTTSCCCCCG
T ss_pred CHHHHHHHHHhhCCCEEEECCCCCHHHHHHh-cc---CCCEEEEEEcCChHhh-hhhhcCCCEEEEc-CCCCCCCCccCH
Confidence 35666777777777665 566788765543 32 1334444444444455 3322239999999 332222222222
Q ss_pred --ccc-cccccccccccccccCceeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 423 --TNI-EYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 423 --~~~-~~~~~~~~~~~~~~~~~~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
++. .....|+ ++.|| +.+.|+++++..++.+|=|..
T Consensus 137 ~~l~~~~~~~~p~----------~LAGG-L~peNV~~ai~~~p~gVDvsS 175 (203)
T 1v5x_A 137 AWAKPLLATGRRV----------ILAGG-IAPENLEEVLALRPYALDLAS 175 (203)
T ss_dssp GGGHHHHHTTSCE----------EECSS-CCSTTHHHHHHHCCSEEEESG
T ss_pred HHHHhhhccCCcE----------EEECC-CCHHHHHHHHhcCCCEEEeCC
Confidence 111 0101222 34555 799999897766999998764
No 362
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=38.33 E-value=26 Score=34.95 Aligned_cols=43 Identities=14% Similarity=0.321 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 147 FVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 147 ~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
..+.++++.+..+...-++|.+.+.+.++.++++|||-|++.+
T Consensus 63 ~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t 105 (243)
T 4gj1_A 63 QFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGS 105 (243)
T ss_dssp CHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECT
T ss_pred HHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEcc
Confidence 3456666655555445677788999999999999999998854
No 363
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=38.13 E-value=64 Score=32.14 Aligned_cols=69 Identities=16% Similarity=0.128 Sum_probs=42.0
Q ss_pred ChhhHHHHHHH-HHhCCCceEEEeeccCC-CChHHHHHHHHHHHh--CCCceEEEEEeccHHHHHHHHHCCCcEE
Q psy3862 115 SAKDLAGLKEI-LAALPEIEYICLDVANG-YTQTFVDFVRRIREM--YPKHVIIAGNVVTGEMVEELILSGADVI 185 (671)
Q Consensus 115 ~~~d~~rl~~l-~~a~~~~d~Ivld~a~G-~~~~~~~~ik~lr~~--~P~~~li~g~v~t~e~a~~Li~AGaD~I 185 (671)
+.+++.++.++ +++ ++|+|--.+.++ ......+.++.+++. .+...+.+|.+.|.+++.+++++|++-|
T Consensus 144 t~eei~~a~~ia~~a--GADfVKTSTGf~~~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 144 GEPLLADVCRVARDA--GADFVKTSTGFHPSGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGATRL 216 (231)
T ss_dssp CHHHHHHHHHHHHHT--TCSEEECCCSCCTTCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHH--CcCEEEcCCCCCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcchhc
Confidence 33444444333 445 788886654332 111122333333332 3556788899999999999999999988
No 364
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=37.72 E-value=1.7e+02 Score=32.13 Aligned_cols=89 Identities=15% Similarity=0.154 Sum_probs=55.7
Q ss_pred HHHHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCCceEEEEEecc----HHHHHHHHHCCCcEEEECcCCCc
Q psy3862 120 AGLKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPKHVIIAGNVVT----GEMVEELILSGADVIKVGIGPGS 193 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~~~li~g~v~t----~e~a~~Li~AGaD~IvVdga~G~ 193 (671)
+.++++.++ +++.|.+....|. |....++++.+++.++ ..+-.-.-.| ...+.++++||||.|.....+
T Consensus 162 ~~a~~l~~~--Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~-~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~g-- 236 (464)
T 2nx9_A 162 DVAQQLAEL--GVDSIALKDMAGILTPYAAEELVSTLKKQVD-VELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISS-- 236 (464)
T ss_dssp HHHHHHHHT--TCSEEEEEETTSCCCHHHHHHHHHHHHHHCC-SCEEEEECCTTSCHHHHHHHHHHTTCSEEEEBCGG--
T ss_pred HHHHHHHHC--CCCEEEEcCCCCCcCHHHHHHHHHHHHHhcC-CeEEEEECCCCChHHHHHHHHHHhCCCEEEEeccc--
Confidence 345566676 7788888767675 5677788888887763 2222112122 356667889999998432211
Q ss_pred eEEEEecccCCcchhhhhccccCCccccccHHHHHHHHHc
Q psy3862 194 VCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILS 233 (671)
Q Consensus 194 ~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~a 233 (671)
+. +-+||..+-.-+.+|-..
T Consensus 237 -----~g---------------ertGN~~lE~lv~~L~~~ 256 (464)
T 2nx9_A 237 -----MS---------------GTYGHPATESLVATLQGT 256 (464)
T ss_dssp -----GC---------------STTSCCBHHHHHHHHTTS
T ss_pred -----cC---------------CCCcCHHHHHHHHHHHhc
Confidence 00 137888888777776554
No 365
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=36.73 E-value=1.1e+02 Score=31.15 Aligned_cols=77 Identities=18% Similarity=0.130 Sum_probs=41.7
Q ss_pred HHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHH-HhhhcCCcchhhhhh----cccee-eccccCCCc
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECAD-AAHGLGGHIISFLTA----MAQKI-INDIKLDFK 298 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~i-~~~~~l~fd 298 (671)
+-+..+++.|+||+-+. +||-|-...-.-.-..+++.+. ++.+ .++||+=..+ -+.+. ..-..++.|
T Consensus 37 ~lv~~li~~Gv~gl~v~------GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGvg~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVG------GTTGESPTLTSEEKVALYRHVVSVVDK-RVPVIAGTGSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp HHHHHHHHTTCCEEEES------STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEC------ccccChhhCCHHHHHHHHHHHHHHhCC-CceEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 44555678999999887 4555555555444445555432 2222 3455442221 11111 222346788
Q ss_pred eeeeecCCCc
Q psy3862 299 DVMLRPKRST 308 (671)
Q Consensus 299 DVll~P~rst 308 (671)
-+|++|-+-.
T Consensus 110 avlv~~P~y~ 119 (301)
T 1xky_A 110 AVMLVAPYYN 119 (301)
T ss_dssp EEEEECCCSS
T ss_pred EEEEcCCCCC
Confidence 8888887643
No 366
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=36.52 E-value=21 Score=36.12 Aligned_cols=75 Identities=15% Similarity=0.204 Sum_probs=47.4
Q ss_pred eEEEEEeccHHHHHHHHHCCCcEEEECc-----CCCce---EEE---------EecccCCcchhhhhccccCCc-ccccc
Q psy3862 162 VIIAGNVVTGEMVEELILSGADVIKVGI-----GPGSV---CTT---------RLKNKTSDFFLIQFYSCIPQA-GNVVT 223 (671)
Q Consensus 162 ~li~g~v~t~e~a~~Li~AGaD~IvVdg-----a~G~~---~~t---------~v~~~~~~~~~i~~i~~~p~a-GnV~t 223 (671)
.+++-+..+.--|+.+.++|+|+|-+.+ .+|+. ..+ .+.+-. + ++.+.++|-+ |+-.
T Consensus 21 ~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~-~---~pviaD~~~Gyg~~~- 95 (255)
T 2qiw_A 21 LLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAV-S---IPVSVDVESGYGLSP- 95 (255)
T ss_dssp CEECCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHC-S---SCEEEECTTCTTCCH-
T ss_pred cEEEecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcC-C---CCEEeccCCCcCcHH-
Confidence 4566678888999999999999999975 34442 000 000000 0 1122234422 2323
Q ss_pred HHHHHHHHHcCCCEEEEc
Q psy3862 224 GEMVEELILSGADVIKVG 241 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG 241 (671)
.+.++.++++||+||++=
T Consensus 96 ~~~~~~l~~aGa~gv~iE 113 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVE 113 (255)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHcCCcEEEEC
Confidence 999999999999999984
No 367
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=36.42 E-value=3.7e+02 Score=27.54 Aligned_cols=62 Identities=16% Similarity=0.277 Sum_probs=36.7
Q ss_pred HHHHHHHHHhCCCceEEEeecc---CCC--------ChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEE
Q psy3862 119 LAGLKEILAALPEIEYICLDVA---NGY--------TQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVI 185 (671)
Q Consensus 119 ~~rl~~l~~a~~~~d~Ivld~a---~G~--------~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~I 185 (671)
.+++.++++. ++++|-+... +|. ...++..++.+++. ... +.=--...+-+++.+++|+|.|
T Consensus 55 ~~~a~~~v~~--GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~--~vp-iSIDT~~~~Va~aAl~aGa~iI 127 (294)
T 2dqw_A 55 LERAREMVAE--GADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL--GVP-VSVDTRKPEVAEEALKLGAHLL 127 (294)
T ss_dssp HHHHHHHHHH--TCSEEEEECC-----------CCHHHHHHHHHHHHHTT--CSC-EEEECSCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHC--CCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCe-EEEECCCHHHHHHHHHhCCCEE
Confidence 4677888888 7777766531 121 14455556665532 111 1112245789999999999977
No 368
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=35.99 E-value=1.7e+02 Score=26.98 Aligned_cols=89 Identities=17% Similarity=0.196 Sum_probs=47.4
Q ss_pred HHHHHHHHHcCCeEEee--cCCCHHHHHHhhhcCcccccceEEecCCChhhHHHHHHHHHhCCCceEEEeeccCC-CChH
Q psy3862 70 FEMAKHLAKHGLFTTIH--KYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVANG-YTQT 146 (671)
Q Consensus 70 ~~lA~Ala~~gglgvIh--~n~~~Eeq~~~i~~~p~~~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~G-~~~~ 146 (671)
..+...+-+..|+-++. .+.++|+..+.++ +. +.++|.+..... +...
T Consensus 35 ~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~---------------------------~~--~~diV~lS~~~~~~~~~ 85 (161)
T 2yxb_A 35 AKVVARALRDAGFEVVYTGLRQTPEQVAMAAV---------------------------QE--DVDVIGVSILNGAHLHL 85 (161)
T ss_dssp HHHHHHHHHHTTCEEECCCSBCCHHHHHHHHH---------------------------HT--TCSEEEEEESSSCHHHH
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH---------------------------hc--CCCEEEEEeechhhHHH
Confidence 45555566777877654 3455555444332 22 223443333322 2344
Q ss_pred HHHHHHHHHHhC-CCceEEEEEeccHHHHHHHHHCCCcEEEE
Q psy3862 147 FVDFVRRIREMY-PKHVIIAGNVVTGEMVEELILSGADVIKV 187 (671)
Q Consensus 147 ~~~~ik~lr~~~-P~~~li~g~v~t~e~a~~Li~AGaD~IvV 187 (671)
..+.++.+++.. ++..+++|.....+....|.+.|+|.+..
T Consensus 86 ~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~~ 127 (161)
T 2yxb_A 86 MKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIFL 127 (161)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEEC
Confidence 455566666654 34555444333444555678999998643
No 369
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=35.08 E-value=39 Score=34.95 Aligned_cols=60 Identities=27% Similarity=0.259 Sum_probs=37.9
Q ss_pred HHHHHHHHCCCcEEEECcC-CCceEEEEecccCCcchhhhhcc------ccC---CccccccH----HHHHHHHHcCCCE
Q psy3862 172 EMVEELILSGADVIKVGIG-PGSVCTTRLKNKTSDFFLIQFYS------CIP---QAGNVVTG----EMVEELILSGADV 237 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga-~G~~~~t~v~~~~~~~~~i~~i~------~~p---~aGnV~t~----~~a~~li~aGAdg 237 (671)
+.++.+.+.|||++.+.-. .+... .-.+.+.+. .+| ++||+ +. +.+..++++||+|
T Consensus 181 ~aa~~a~~lGaD~iKv~~~~~~~g~---------~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~G 250 (304)
T 1to3_A 181 DAAKELGDSGADLYKVEMPLYGKGA---------RSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAGASG 250 (304)
T ss_dssp HHHHHHTTSSCSEEEECCGGGGCSC---------HHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHcCCCEEEeCCCcCCCCC---------HHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHcCCeE
Confidence 4578888899999987542 11000 000111111 134 59999 44 6789999999999
Q ss_pred EEEc
Q psy3862 238 IKVG 241 (671)
Q Consensus 238 vkVG 241 (671)
+-||
T Consensus 251 v~vG 254 (304)
T 1to3_A 251 FLAG 254 (304)
T ss_dssp EEES
T ss_pred EEEe
Confidence 9998
No 370
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=35.00 E-value=5.5e+02 Score=31.33 Aligned_cols=163 Identities=18% Similarity=0.161 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCceEEEEEec-------------cHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhcccc
Q psy3862 149 DFVRRIREMYPKHVIIAGNVV-------------TGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCI 215 (671)
Q Consensus 149 ~~ik~lr~~~P~~~li~g~v~-------------t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~ 215 (671)
+.++.+++..|+..+.+-.-. ..+.++.+.++|+|.| ++-.-..++...
T Consensus 595 e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~v~~~~v~~a~~~Gvd~i------------rif~~~sd~~~~------ 656 (1150)
T 3hbl_A 595 ERLERLRKAIPNVLFQMLLRASNAVGYKNYPDNVIHKFVQESAKAGIDVF------------RIFDSLNWVDQM------ 656 (1150)
T ss_dssp HHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHHHHHHHHHHHHHTTCCEE------------EEECTTCCGGGG------
T ss_pred HHHHHHHHhCCCCeEEEEeccccccccccCCchhHHHHHHHHHhCCcCEE------------EEEeeCCHHHHH------
Q ss_pred CCccccccHHHHHHHHHcCCCEEEEcccCCCccccceecccCc---chhhhHHHHHHHhhhcCCcchhhhhhccceeecc
Q psy3862 216 PQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGY---PQFSAVLECADAAHGLGGHIISFLTAMAQKIIND 292 (671)
Q Consensus 216 p~aGnV~t~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 292 (671)
....+...++|.-..-.. |.|+-...... =...-+++.++.+.+.|.++|+
T Consensus 657 --------~~~~~~~~e~g~~~~~~i------~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~------------ 710 (1150)
T 3hbl_A 657 --------KVANEAVQEAGKISEGTI------CYTGDILNPERSNIYTLEYYVKLAKELEREGFHILA------------ 710 (1150)
T ss_dssp --------HHHHHHHHHTTCEEEEEE------ECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEE------------
T ss_pred --------HHHHHHHHHHhhheeEEE------eecccccChhhcCCCCHHHHHHHHHHHHHcCCCeee------------
Q ss_pred ccCCCceeeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCeEEEccCCCHHHHHH
Q psy3862 293 IKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKA 372 (671)
Q Consensus 293 ~~l~fdDVll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Gglgvihr~~~~e~~~~ 372 (671)
T Consensus 711 -------------------------------------------------------------------------------- 710 (1150)
T 3hbl_A 711 -------------------------------------------------------------------------------- 710 (1150)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Q ss_pred HHhcCcccccceeeeccc-ChhhHHHH---HHcCCcEEEEccccccccccccccccccccccccccccccccCceeeccc
Q psy3862 373 FAVQNPDVIKHVADGGCT-SPGDVAKA---MGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGC 448 (671)
Q Consensus 373 ~v~~~~~~~~~v~~~~~~-~~~~~~~l---~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~ 448 (671)
+.+..|. .|.++..+ +..-.|+-+ ..|.|....+-+
T Consensus 711 -----------l~Dt~G~~~P~~~~~lv~~l~~~~~~~i---~~H~Hnt~G~a~-------------------------- 750 (1150)
T 3hbl_A 711 -----------IKDMAGLLKPKAAYELIGELKSAVDLPI---HLHTHDTSGNGL-------------------------- 750 (1150)
T ss_dssp -----------EEETTCCCCHHHHHHHHHHHHHHCCSCE---EEEECBTTSCHH--------------------------
T ss_pred -----------EcCccCCCCHHHHHHHHHHHHHhcCCeE---EEEeCCCCcHHH--------------------------
Q ss_pred cCchhHHHHHHcCCcEEEECccccCCccCCCc
Q psy3862 449 TSPGDVAKAMGAGADFVMLGGMFAGHDQSGGE 480 (671)
Q Consensus 449 v~t~~~a~~l~aGAd~V~vG~~g~G~s~ctt~ 480 (671)
.+.-.++++|||.|=.-+ .|-+.||+.
T Consensus 751 ---An~laA~~aGa~~vD~ai--~GlG~~~gn 777 (1150)
T 3hbl_A 751 ---LTYKQAIDAGVDIIDTAV--ASMSGLTSQ 777 (1150)
T ss_dssp ---HHHHHHHHTTCSEEEEBC--GGGCSBTSC
T ss_pred ---HHHHHHHHhCCCEEEEec--cccCCCCCC
No 371
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=34.83 E-value=43 Score=32.77 Aligned_cols=109 Identities=14% Similarity=0.060 Sum_probs=58.3
Q ss_pred HHHHHHHcCC-eEEEccCCCHH---HHHHHHhcCcccccceeeeccc--ChhhHHHHHHcCCcEEEEccccc-----ccc
Q psy3862 348 MAKHLAKHGL-FTTIHKYYTLE---EWKAFAVQNPDVIKHVADGGCT--SPGDVAKAMGAGADFVMLGGMFA-----GHD 416 (671)
Q Consensus 348 mA~~la~~Gg-lgvihr~~~~e---~~~~~v~~~~~~~~~v~~~~~~--~~~~~~~l~~aG~d~i~id~~a~-----gh~ 416 (671)
++.+++++|. +-.+|-.-..+ +..+.+++.......++..-.+ +.+++..+.+.|+|.+++. .+. |..
T Consensus 74 ~~~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~-~a~~~~~~Gvv 152 (221)
T 3exr_A 74 VAKNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYH-QSRDALLAGET 152 (221)
T ss_dssp HHHHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEE-CCHHHHHHTCC
T ss_pred HHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHH-HHHhcCCCccc
Confidence 4555788874 45568665544 4444443321001123333333 4566667778899888875 331 221
Q ss_pred ccccccccccccccccccccccccCc----eeeccccCchhHHHHHHcCCcEEEECc
Q psy3862 417 QSGGELTNIEYMFFPLVGDMNSYLGG----VVDGGCTSPGDVAKAMGAGADFVMLGG 469 (671)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~gG~v~t~~~a~~l~aGAd~V~vG~ 469 (671)
.+..+ +..+|+.++. .++||+ ...++.++..+|||.+.||.
T Consensus 153 ~s~~e-----------~~~ir~~~~~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~ 197 (221)
T 3exr_A 153 WGEKD-----------LNKVKKLIEMGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGR 197 (221)
T ss_dssp CCHHH-----------HHHHHHHHHHTCEEEEESSC-CGGGGGGGTTCCCSEEEECH
T ss_pred cCHHH-----------HHHHHHhhcCCceEEEECCC-CHHHHHHHHHCCCCEEEECc
Confidence 11111 1222332221 367885 66666667899999999985
No 372
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=34.22 E-value=1.1e+02 Score=31.07 Aligned_cols=70 Identities=11% Similarity=0.024 Sum_probs=41.5
Q ss_pred EEEEeccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccc--c-C-CccccccHHHHHHHHHcCCCEEE
Q psy3862 164 IAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSC--I-P-QAGNVVTGEMVEELILSGADVIK 239 (671)
Q Consensus 164 i~g~v~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~--~-p-~aGnV~t~~~a~~li~aGAdgvk 239 (671)
+..++.+++.++.+..+|+|+|.+|..|+-.....+.. .+..+.. . + +-=|-.+....++++++|+++|.
T Consensus 43 l~~~~~~p~~~e~a~~~GaD~v~lDlEh~~~~~~~~~~------~l~a~~~~~~~~~VRv~~~d~~di~~~ld~ga~~Im 116 (287)
T 2v5j_A 43 LWLGLSSSYSAELLAGAGFDWLLIDGEHAPNNVQTVLT------QLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTLL 116 (287)
T ss_dssp EEECSCCHHHHHHHHTSCCSEEEEESSSSSCCHHHHHH------HHHHHTTSSSEEEEECSSSCHHHHHHHHHTTCCEEE
T ss_pred EEEECCCHHHHHHHHhCCCCEEEEeCCCccchHHHHHH------HHHHHHhcCCCEEEEECCCCHHHHHHHHhCCCCEEE
Confidence 34466789999999999999999999887421000000 0000000 0 0 00012345688999999998764
No 373
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=34.08 E-value=30 Score=35.31 Aligned_cols=64 Identities=14% Similarity=0.144 Sum_probs=39.5
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhC-CCc---------------eEEEEEe-----ccHHHHHHHH
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMY-PKH---------------VIIAGNV-----VTGEMVEELI 178 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~-P~~---------------~li~g~v-----~t~e~a~~Li 178 (671)
+.+..++++ +++.+.++.. ....+.|+.+.+.. |.. .++-|.- ...++++++.
T Consensus 98 ~~a~rl~ka--Ga~aVklEgg----~e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~ 171 (264)
T 1m3u_A 98 ENAATVMRA--GANMVKIEGG----EWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALE 171 (264)
T ss_dssp HHHHHHHHT--TCSEEECCCS----GGGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHc--CCCEEEECCc----HHHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHH
Confidence 445577776 8888888643 34566777665542 310 1122211 1137889999
Q ss_pred HCCCcEEEECc
Q psy3862 179 LSGADVIKVGI 189 (671)
Q Consensus 179 ~AGaD~IvVdg 189 (671)
+||||.|++.+
T Consensus 172 eAGA~~ivlE~ 182 (264)
T 1m3u_A 172 AAGAQLLVLEC 182 (264)
T ss_dssp HHTCCEEEEES
T ss_pred HCCCcEEEEec
Confidence 99999998854
No 374
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=33.98 E-value=2.4e+02 Score=28.97 Aligned_cols=77 Identities=16% Similarity=0.072 Sum_probs=46.9
Q ss_pred HHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHH-HHhhhcCCcchhhhhhc----ccee-eccccCCCc
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECA-DAAHGLGGHIISFLTAM----AQKI-INDIKLDFK 298 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~i-~~~~~l~fd 298 (671)
+-+..+++.|+||+-+. +||-|-...-.-.-..+++++ +++.+ .++||+=..+. +.+. ..-..++.|
T Consensus 48 ~lv~~li~~Gv~Gl~v~------GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAV------GTTGESATLDVEEHIQVIRRVVDQVKG-RIPVIAGTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp HHHHHHHHHTCCEEEES------SGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEC------ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 33445678999999886 577776666666666666654 33333 46666532221 1111 223457889
Q ss_pred eeeeecCCCc
Q psy3862 299 DVMLRPKRST 308 (671)
Q Consensus 299 DVll~P~rst 308 (671)
-++++|-+-.
T Consensus 121 avlv~~P~y~ 130 (314)
T 3qze_A 121 ACLLVTPYYN 130 (314)
T ss_dssp EEEEECCCSS
T ss_pred EEEEcCCCCC
Confidence 9999977644
No 375
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=33.92 E-value=30 Score=35.58 Aligned_cols=63 Identities=11% Similarity=0.076 Sum_probs=37.8
Q ss_pred HHHHHHH-hCCCceEEEeeccCCCChHHHHHHHHHHHhC-CCc---------------eEEEEEe----ccHHHHHHHHH
Q psy3862 121 GLKEILA-ALPEIEYICLDVANGYTQTFVDFVRRIREMY-PKH---------------VIIAGNV----VTGEMVEELIL 179 (671)
Q Consensus 121 rl~~l~~-a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~-P~~---------------~li~g~v----~t~e~a~~Li~ 179 (671)
.+..+++ + +++.+.++.. ....+.|+.+.+.. |.. .++-|.- ...++++++.+
T Consensus 117 na~rl~~ea--Ga~aVklEdg----~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~e 190 (281)
T 1oy0_A 117 AATRFLKDG--GAHAVKLEGG----ERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAE 190 (281)
T ss_dssp HHHHHHHTT--CCSEEEEEBS----GGGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh--CCeEEEECCc----HHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHH
Confidence 3566676 5 7888888743 34566777665542 311 1222221 12378899999
Q ss_pred CCCcEEEECc
Q psy3862 180 SGADVIKVGI 189 (671)
Q Consensus 180 AGaD~IvVdg 189 (671)
||||.|++.+
T Consensus 191 AGA~~ivlE~ 200 (281)
T 1oy0_A 191 AGAFAVVMEM 200 (281)
T ss_dssp HTCSEEEEES
T ss_pred cCCcEEEEec
Confidence 9999998854
No 376
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=33.79 E-value=31 Score=35.88 Aligned_cols=47 Identities=23% Similarity=0.243 Sum_probs=37.7
Q ss_pred HHHHHHHcCCCEEE--EcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchh
Q psy3862 226 MVEELILSGADVIK--VGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIIS 280 (671)
Q Consensus 226 ~a~~li~aGAdgvk--VG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~ 280 (671)
.++.++++|||+++ +-|.+||--+ .-|+..+.++.+.|+++|.+++.
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e--------~~~l~~la~vv~ea~~~GlP~~~ 181 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGT--------APTLEATAHAVNEAAAAQLPIML 181 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTH--------HHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhH--------HHHHHHHHHHHHHHHHcCCcEEE
Confidence 45667889999999 5678887433 46889999999999999988766
No 377
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=33.56 E-value=72 Score=27.65 Aligned_cols=65 Identities=9% Similarity=0.093 Sum_probs=36.8
Q ss_pred eccHHHHH-HHHHCCCcEEEECcCC-Cce---EEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEE
Q psy3862 168 VVTGEMVE-ELILSGADVIKVGIGP-GSV---CTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIK 239 (671)
Q Consensus 168 v~t~e~a~-~Li~AGaD~IvVdga~-G~~---~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvk 239 (671)
..+.+.+. .+.+...|+|++|..- +.. ....+++..+..+++ +-.+-.+.+....++++||+++-
T Consensus 52 ~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii-------~ls~~~~~~~~~~~~~~g~~~~l 121 (150)
T 4e7p_A 52 AKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVV-------VVTTFKRAGYFERAVKAGVDAYV 121 (150)
T ss_dssp ESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEE-------EEESCCCHHHHHHHHHTTCSEEE
T ss_pred ECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEE-------EEeCCCCHHHHHHHHHCCCcEEE
Confidence 34444444 4445678999998732 211 122233323322221 34455677888899999999883
No 378
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=33.46 E-value=18 Score=35.19 Aligned_cols=27 Identities=37% Similarity=0.543 Sum_probs=23.7
Q ss_pred cC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 215 IP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 215 ~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
+| ++|.|-|.+.+.+++++||++|-.|
T Consensus 151 ~PiIaGGlI~~~edv~~al~aGA~aVsTs 179 (192)
T 3kts_A 151 IPVIAGGLIETSEQVNQVIASGAIAVTTS 179 (192)
T ss_dssp CCEEEESSCCSHHHHHHHHTTTEEEEEEC
T ss_pred CCEEEECCcCCHHHHHHHHHcCCeEEEeC
Confidence 56 6888889999999999999999655
No 379
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=33.39 E-value=4.5e+02 Score=27.65 Aligned_cols=70 Identities=7% Similarity=0.020 Sum_probs=34.4
Q ss_pred CChhhH-HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHH----CCCcEEE
Q psy3862 114 ISAKDL-AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELIL----SGADVIK 186 (671)
Q Consensus 114 ~~~~d~-~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~----AGaD~Iv 186 (671)
++.++. +-++.|.+. +++.|=.-. +..+..-.+.++.+.+..|+..+.+-.-...+..++.++ +|+|.|.
T Consensus 31 ~~~~~Kl~ia~~L~~~--Gv~~IE~g~-p~~~~~d~e~v~~i~~~~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~ 105 (370)
T 3rmj_A 31 MTKEEKIRVARQLEKL--GVDIIEAGF-AAASPGDFEAVNAIAKTITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIH 105 (370)
T ss_dssp CCHHHHHHHHHHHHHH--TCSEEEEEE-GGGCHHHHHHHHHHHTTCSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEE
T ss_pred cCHHHHHHHHHHHHHc--CCCEEEEeC-CCCCHHHHHHHHHHHHhCCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEE
Confidence 344443 333444455 555543321 122334445666665555654433322245555555555 8888883
No 380
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=32.89 E-value=38 Score=38.04 Aligned_cols=69 Identities=19% Similarity=0.153 Sum_probs=37.1
Q ss_pred HHHHHcC-----CcEEEEcccc--ccccccccccccccccccccccccccc----cCceeeccccCchhHHH-HHHcCCc
Q psy3862 396 AKAMGAG-----ADFVMLGGMF--AGHDQSGGELTNIEYMFFPLVGDMNSY----LGGVVDGGCTSPGDVAK-AMGAGAD 463 (671)
Q Consensus 396 ~~l~~aG-----~d~i~id~~a--~gh~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~gG~v~t~~~a~-~l~aGAd 463 (671)
.+++++| ||+|=|.|-+ .|. .......++++..|.++.+++. ..++.+-=--...++++ ++++|||
T Consensus 256 ~~mv~~G~~~~~AdIIDIGgeSTRPGa--~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT~~a~VaeaAl~aGad 333 (545)
T 2bmb_A 256 IKLCKDALYLHESVIIDVGGCSTRPNS--IQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVD 333 (545)
T ss_dssp HHHHHHHHTTCSCEEEEEECSCCSTTC--CCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEECCCHHHHHHHHHTTCC
T ss_pred HHHHHcCCCCCCceEEEECCCCCCCCC--CCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCcHHHHHHHHHcCCC
Confidence 3457788 8888887533 232 2223344455556666655531 11211111124455666 6899999
Q ss_pred EEE
Q psy3862 464 FVM 466 (671)
Q Consensus 464 ~V~ 466 (671)
+|=
T Consensus 334 IIN 336 (545)
T 2bmb_A 334 IIN 336 (545)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 381
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=32.65 E-value=23 Score=34.46 Aligned_cols=59 Identities=17% Similarity=0.292 Sum_probs=35.3
Q ss_pred CceEEEeeccC-CC-----ChHHHHHHHHHHHhCC----CceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 131 EIEYICLDVAN-GY-----TQTFVDFVRRIREMYP----KHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 131 ~~d~Ivld~a~-G~-----~~~~~~~ik~lr~~~P----~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
.++++.++..+ |. .....+.++++++..+ ...+++....+.+.+..++++|+|.+++.+
T Consensus 140 ~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aGad~vvvgS 208 (230)
T 1rpx_A 140 AVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGS 208 (230)
T ss_dssp TCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEEEESH
T ss_pred hCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcCCCEEEECh
Confidence 56777444432 22 2344566666654332 344444433457888889999999998854
No 382
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=32.63 E-value=2.6e+02 Score=29.47 Aligned_cols=87 Identities=21% Similarity=0.186 Sum_probs=55.6
Q ss_pred HHHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCC---ceEEEEEecc----HHHHHHHHHCCCcEEEECcCC
Q psy3862 121 GLKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPK---HVIIAGNVVT----GEMVEELILSGADVIKVGIGP 191 (671)
Q Consensus 121 rl~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~---~~li~g~v~t----~e~a~~Li~AGaD~IvVdga~ 191 (671)
.++.+.++ +++.|.+....|. |..+.++++.+++.+|. ..+-.-.-.| ...+.+.+++|||.|.....+
T Consensus 162 ~~~~~~~~--Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~G 239 (370)
T 3rmj_A 162 ICGAVIEA--GATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNG 239 (370)
T ss_dssp HHHHHHHH--TCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGG
T ss_pred HHHHHHHc--CCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccc
Confidence 34556666 7778877666665 57788889999888885 3332222222 356667889999999442211
Q ss_pred CceEEEEecccCCcchhhhhccccCCccccccHHHHHHHH
Q psy3862 192 GSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELI 231 (671)
Q Consensus 192 G~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li 231 (671)
+.. .+||+.+-+-+.+|-
T Consensus 240 -------lGe---------------raGN~~lE~vv~~L~ 257 (370)
T 3rmj_A 240 -------LGE---------------RAGNASVEEIVMALK 257 (370)
T ss_dssp -------CSS---------------TTCBCBHHHHHHHHH
T ss_pred -------cCc---------------ccccccHHHHHHHHH
Confidence 000 489998888776664
No 383
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=32.59 E-value=69 Score=33.74 Aligned_cols=64 Identities=16% Similarity=0.156 Sum_probs=39.5
Q ss_pred HHHHHHhCCCceEEEeeccC--C------CChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCC-CcEEEE
Q psy3862 122 LKEILAALPEIEYICLDVAN--G------YTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSG-ADVIKV 187 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~--G------~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AG-aD~IvV 187 (671)
++.+-++ +++++.+.... . .+....+.++.+++......+.+|.+.+.+.++++++.| +|.|.+
T Consensus 252 a~~L~~~--Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 252 ARRFKAG--GLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp HHHHHHT--TCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEEC
T ss_pred HHHHHHc--CCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEe
Confidence 3344444 67887765321 0 011235566666665433244455667899999999999 999965
No 384
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=31.55 E-value=1.4e+02 Score=29.52 Aligned_cols=105 Identities=10% Similarity=0.071 Sum_probs=56.2
Q ss_pred CceEEEeeccC--CCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc--CCCce----E-EEE-ec
Q psy3862 131 EIEYICLDVAN--GYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI--GPGSV----C-TTR-LK 200 (671)
Q Consensus 131 ~~d~Ivld~a~--G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg--a~G~~----~-~t~-v~ 200 (671)
+++.+.+..+. -....+.++++...+ .--..++| +.+.+..+.+.+.+.++|-+.- +.|+. . +.. +.
T Consensus 85 Ga~~VllghseRR~~~~e~~~k~~~A~~-~GL~~ivc--Vge~~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~ 161 (226)
T 1w0m_A 85 GGSGVILNHSEAPLKLNDLARLVAKAKS-LGLDVVVC--APDPRTSLAAAALGPHAVAVEPPELIGTGRAVSRYKPEAIV 161 (226)
T ss_dssp TCCEEEECCTTSCCBHHHHHHHHHHHHH-TTCEEEEE--ESSHHHHHHHHHTCCSEEEECCGGGTTTSCCHHHHCHHHHH
T ss_pred CCCEEEEeeeeccCCHHHHHHHHHHHHH-CCCEEEEE--eCCHHHHHHHhcCCCCEEEEcChhhhccCCCCCCCChhHHH
Confidence 77888775221 111222233332222 21223444 4455555677888999887654 34432 0 000 00
Q ss_pred ccCCcchhhhhc-cccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 201 NKTSDFFLIQFY-SCIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 201 ~~~~~~~~i~~i-~~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
. ...++..+ ..++ ..|+|-+.+....+...|+||+-||
T Consensus 162 ~---~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG 202 (226)
T 1w0m_A 162 E---TVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLA 202 (226)
T ss_dssp H---HHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred H---HHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEEC
Confidence 0 00011111 1122 5899999999999999999999999
No 385
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=31.51 E-value=1.3e+02 Score=29.06 Aligned_cols=67 Identities=16% Similarity=0.169 Sum_probs=47.7
Q ss_pred CCCHHHHHHHHHcC--CeEEEc-----cCCCHHHHHHHHhcCcccccceeeecccChhhHHHHH-HcCCcEEEEc
Q psy3862 343 VGTFEMAKHLAKHG--LFTTIH-----KYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAM-GAGADFVMLG 409 (671)
Q Consensus 343 V~~~~mA~~la~~G--glgvih-----r~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~-~aG~d~i~id 409 (671)
+|+.+-|.+.+++| .+|+|+ |+.++|+..+..+.+|..+..|+..-..+++++..++ +.+.|++-+.
T Consensus 9 it~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 9 ITNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp CCSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSEEEEC
T ss_pred CCcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 57788888888887 688886 8889987777777666544444443334557776664 5699999874
No 386
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=31.49 E-value=2.5e+02 Score=28.81 Aligned_cols=78 Identities=9% Similarity=-0.041 Sum_probs=41.2
Q ss_pred HHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchhhhhhc----ccee-eccccCCC-
Q psy3862 224 GEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFLTAM----AQKI-INDIKLDF- 297 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i-~~~~~l~f- 297 (671)
.+-+..+++.|+||+-+. +||-|-...-.-.-..+++.+..+-.-.++||+=.... +.+. ..-..++.
T Consensus 31 ~~lv~~li~~Gv~Gl~v~------GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~ 104 (311)
T 3h5d_A 31 PALIEHLLAHHTDGILLA------GTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGF 104 (311)
T ss_dssp HHHHHHHHHTTCCCEEES------STTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHcCCCEEEEC------ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCC
Confidence 455667788999999887 55665555544444455554332222234554422111 1111 11223454
Q ss_pred ceeeeecCCC
Q psy3862 298 KDVMLRPKRS 307 (671)
Q Consensus 298 dDVll~P~rs 307 (671)
|-++++|-+-
T Consensus 105 davlv~~P~y 114 (311)
T 3h5d_A 105 AAGLAIVPYY 114 (311)
T ss_dssp SEEEEECCCS
T ss_pred cEEEEcCCCC
Confidence 7788887654
No 387
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=31.48 E-value=3e+02 Score=27.83 Aligned_cols=121 Identities=18% Similarity=0.117 Sum_probs=71.5
Q ss_pred HHHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHH-HhhhcCCcchhhhhhccceeeccccCCCceeee
Q psy3862 224 GEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECAD-AAHGLGGHIISFLTAMAQKIINDIKLDFKDVML 302 (671)
Q Consensus 224 ~~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll 302 (671)
.+-+..+++.|+||+-+. +||-|-.-.-.-.-..+++.+. ++.+
T Consensus 26 ~~lv~~li~~Gv~gl~v~------GttGE~~~Lt~~Er~~v~~~~~~~~~g----------------------------- 70 (292)
T 3daq_A 26 KAHVNFLLENNAQAIIVN------GTTAESPTLTTDEKELILKTVIDLVDK----------------------------- 70 (292)
T ss_dssp HHHHHHHHHTTCCEEEES------SGGGTGGGSCHHHHHHHHHHHHHHHTT-----------------------------
T ss_pred HHHHHHHHHcCCCEEEEC------ccccccccCCHHHHHHHHHHHHHHhCC-----------------------------
Confidence 345567788999999887 6788877777666667777653 3321
Q ss_pred ecCCCccCCCCcccceeeeeeccCCceeeCcceEecC--CCCCCCHHHHHHHHHcCCeEEEc--cC---CCHHHHHHHHh
Q psy3862 303 RPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAAN--MDTVGTFEMAKHLAKHGLFTTIH--KY---YTLEEWKAFAV 375 (671)
Q Consensus 303 ~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~--MDtV~~~~mA~~la~~Gglgvih--r~---~~~e~~~~~v~ 375 (671)
.+|||+.- .+|--.-++|+...+.|.=+++- -+ .+.+++.++.+
T Consensus 71 -----------------------------rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~ 121 (292)
T 3daq_A 71 -----------------------------RVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFE 121 (292)
T ss_dssp -----------------------------SSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHH
T ss_pred -----------------------------CCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHH
Confidence 36777643 34555566777777777644443 22 25677777766
Q ss_pred cCccc--ccce-----eeec-ccChhhHHHHHHcCCcEEEEc
Q psy3862 376 QNPDV--IKHV-----ADGG-CTSPGDVAKAMGAGADFVMLG 409 (671)
Q Consensus 376 ~~~~~--~~~v-----~~~~-~~~~~~~~~l~~aG~d~i~id 409 (671)
++-+. ++.+ ...+ ..+++.+.+|.+ --+++-|-
T Consensus 122 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~-~pnivgiK 162 (292)
T 3daq_A 122 AIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ-HPYIVALK 162 (292)
T ss_dssp HHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT-STTEEEEE
T ss_pred HHHHhCCCCEEEEecccccCCCCCHHHHHHHhc-CCCEEEEE
Confidence 54221 1111 1112 235677777765 34666665
No 388
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=31.13 E-value=1.4e+02 Score=29.44 Aligned_cols=104 Identities=13% Similarity=0.077 Sum_probs=55.7
Q ss_pred CceEEEeeccC--CCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc--CCCceEEEEecccCCcc
Q psy3862 131 EIEYICLDVAN--GYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI--GPGSVCTTRLKNKTSDF 206 (671)
Q Consensus 131 ~~d~Ivld~a~--G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg--a~G~~~~t~v~~~~~~~ 206 (671)
+++.+.+..+. -....+.++++...+.. -..++| +.+.+..+.+.+.+.++|-+.- +.|+... ++ ..+.
T Consensus 88 Ga~~VllghseRR~~~~e~~~k~~~A~~~G-L~~ivc--Vge~~e~~~~~~~~~~iIayep~waiGtG~~--v~--t~~~ 160 (225)
T 1hg3_A 88 GAVGTLLNHSENRMILADLEAAIRRAEEVG-LMTMVC--SNNPAVSAAVAALNPDYVAVEPPELIGTGIP--VS--KAKP 160 (225)
T ss_dssp TCCEEEESCGGGCCBHHHHHHHHHHHHHHT-CEEEEE--ESSHHHHHHHHTTCCSEEEECCTTTTTTSCC--TT--TSCT
T ss_pred CCCEEEECcchhcCCHHHHHHHHHHHHHCC-CEEEEE--eCCHHHHHHHhcCCCCEEEEeChhhhccCCC--CC--CCCh
Confidence 77887775221 11122333333322222 223444 4445555667788888886654 3333200 00 0011
Q ss_pred hhhh----hcc----ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 207 FLIQ----FYS----CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 207 ~~i~----~i~----~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+++ ++. .++ ..|+|-+.+....+...|+||+-||
T Consensus 161 d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG 205 (225)
T 1hg3_A 161 EVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLA 205 (225)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred hHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeC
Confidence 1111 111 122 5899999999999999999999999
No 389
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=31.09 E-value=19 Score=36.91 Aligned_cols=64 Identities=27% Similarity=0.368 Sum_probs=37.9
Q ss_pred HHHHHHHHCCCcEEEECc---CCCceEEE---EecccCCcchhhhhcc--ccCCccccccHHHHHHHHHcCCCEE
Q psy3862 172 EMVEELILSGADVIKVGI---GPGSVCTT---RLKNKTSDFFLIQFYS--CIPQAGNVVTGEMVEELILSGADVI 238 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdg---a~G~~~~t---~v~~~~~~~~~i~~i~--~~p~aGnV~t~~~a~~li~aGAdgv 238 (671)
++++.+++.|||+|.|++ .+|...+. ++.. -+++++.+. .+|+.=---..+-+++++++||+-|
T Consensus 34 ~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~R---v~pvi~~l~~~~v~iSIDT~~~~Va~~al~aGa~iI 105 (270)
T 4hb7_A 34 NRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNR---VLPVVEAIVGFDVKISVDTFRSEVAEACLKLGVDMI 105 (270)
T ss_dssp HHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHH---HHHHHHHHTTSSSEEEEECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHH---HHHHHHHhhcCCCeEEEECCCHHHHHHHHHhcccee
Confidence 678899999999999976 45542111 1110 022333332 1222222335788999999999966
No 390
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=31.00 E-value=1.5e+02 Score=28.68 Aligned_cols=67 Identities=16% Similarity=0.082 Sum_probs=47.5
Q ss_pred CCCHHHHHHHHHcC--CeEEEc-----cCCCHHHHHHHHhcCcccccceeeecccChhhHHHHH-HcCCcEEEEc
Q psy3862 343 VGTFEMAKHLAKHG--LFTTIH-----KYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAM-GAGADFVMLG 409 (671)
Q Consensus 343 V~~~~mA~~la~~G--glgvih-----r~~~~e~~~~~v~~~~~~~~~v~~~~~~~~~~~~~l~-~aG~d~i~id 409 (671)
+|+.+-|.+.+++| .+|+|+ |+.++|+..+..+.+|.-+..++..-..+++++..++ +.+.|++-+.
T Consensus 8 it~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 82 (203)
T 1v5x_A 8 ITRLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLH 82 (203)
T ss_dssp CCCHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSEEEEC
T ss_pred CCcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 57888888888887 688886 8889987777777666544444443333457776664 5799999874
No 391
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=30.62 E-value=32 Score=35.30 Aligned_cols=64 Identities=14% Similarity=0.263 Sum_probs=36.3
Q ss_pred HHHHHHHHCCCcEEEECcC---CCceE---EEEecccCCcchhhhhcc--ccCCccccccHHHHHHHHHcCCCEE
Q psy3862 172 EMVEELILSGADVIKVGIG---PGSVC---TTRLKNKTSDFFLIQFYS--CIPQAGNVVTGEMVEELILSGADVI 238 (671)
Q Consensus 172 e~a~~Li~AGaD~IvVdga---~G~~~---~t~v~~~~~~~~~i~~i~--~~p~aGnV~t~~~a~~li~aGAdgv 238 (671)
+.++.+++.|||+|.|.+. +|... ..++... +++++.+. .+|+.=-.-..+.+++++++||+-|
T Consensus 33 ~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv---~pvi~~l~~~~~piSIDT~~~~va~aAl~aGa~iI 104 (280)
T 1eye_A 33 KHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRV---IPVVKELAAQGITVSIDTMRADVARAALQNGAQMV 104 (280)
T ss_dssp HHHHHHHHTTCSEEEEECC--------------HHHH---HHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHH---HHHHHHhhcCCCEEEEeCCCHHHHHHHHHcCCCEE
Confidence 6788999999999999872 34321 1112110 22222222 2343222346788999999999876
No 392
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=30.34 E-value=1.9e+02 Score=30.37 Aligned_cols=134 Identities=11% Similarity=0.028 Sum_probs=77.5
Q ss_pred ChhhH-HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhC-CCceEEE-EEe-ccH----HHHHHHHH--CCCcE
Q psy3862 115 SAKDL-AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMY-PKHVIIA-GNV-VTG----EMVEELIL--SGADV 184 (671)
Q Consensus 115 ~~~d~-~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~-P~~~li~-g~v-~t~----e~a~~Li~--AGaD~ 184 (671)
+++++ +.+...+++ +.+.+-+...++..+..++.++.+|+.. |...+.. +|. .+. +.++.|.+ .+++.
T Consensus 145 ~~~~~~~~a~~~~~~--Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~ 222 (389)
T 2oz8_A 145 DDDAFVSLFSHAASI--GYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLW 222 (389)
T ss_dssp CHHHHHHHHHHHHHT--TCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSE
T ss_pred CHHHHHHHHHHHHHh--CCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceE
Confidence 44443 445556665 5566656555444566678888888765 5554433 232 233 45567777 56665
Q ss_pred EEECcCCCceEEEEecccCCcchhhhhc-c---ccC--CccccccHHHHHHHHHcC-CCEEEEcccCCCccccceecccC
Q psy3862 185 IKVGIGPGSVCTTRLKNKTSDFFLIQFY-S---CIP--QAGNVVTGEMVEELILSG-ADVIKVGIGPGSVCTTRLKTGVG 257 (671)
Q Consensus 185 IvVdga~G~~~~t~v~~~~~~~~~i~~i-~---~~p--~aGnV~t~~~a~~li~aG-AdgvkVG~~~~~~~~Tr~V~gv~ 257 (671)
|- +. +.. .++.....+ . .+| ..+.+ +.+.++.+++.| +|.|.+. |
T Consensus 223 iE----qP------~~~--~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik---G------------ 274 (389)
T 2oz8_A 223 VE----DP------ILR--HDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH---G------------ 274 (389)
T ss_dssp EE----SC------BCT--TCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC---S------------
T ss_pred Ee----CC------CCC--cCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC---c------------
Confidence 52 10 100 011111111 1 246 46778 999999999887 7888886 2
Q ss_pred cchhhhHHHHHHHhhhcCCcchh
Q psy3862 258 YPQFSAVLECADAAHGLGGHIIS 280 (671)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~ 280 (671)
-++..++.++.|+.+|+.++-
T Consensus 275 --Git~a~~i~~~A~~~gi~~~~ 295 (389)
T 2oz8_A 275 --QVTDVMRIGWLAAELGIPISI 295 (389)
T ss_dssp --CHHHHHHHHHHHHHHTCCEEE
T ss_pred --CHHHHHHHHHHHHHcCCeEee
Confidence 366677777778777766443
No 393
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=29.87 E-value=2.2e+02 Score=29.45 Aligned_cols=87 Identities=14% Similarity=0.220 Sum_probs=54.9
Q ss_pred HHHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCC---ceEEEEEecc----HHHHHHHHHCCCcEEEECcCC
Q psy3862 121 GLKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPK---HVIIAGNVVT----GEMVEELILSGADVIKVGIGP 191 (671)
Q Consensus 121 rl~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~---~~li~g~v~t----~e~a~~Li~AGaD~IvVdga~ 191 (671)
.++.+.+. +++.|.+....|. |..+.++++.+++.+|. ..+-.-.-.| ...+.+.+++|||.|.....+
T Consensus 156 ~~~~~~~~--G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~G 233 (325)
T 3eeg_A 156 MVEAVIEA--GADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTING 233 (325)
T ss_dssp HHHHHHHH--TCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGGG
T ss_pred HHHHHHhc--CCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEeccc
Confidence 34555666 6778887766665 57788889999888885 3322211122 356667789999998543211
Q ss_pred CceEEEEecccCCcchhhhhccccCCccccccHHHHHHHH
Q psy3862 192 GSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELI 231 (671)
Q Consensus 192 G~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li 231 (671)
+. . .+||+.|-+-+..|-
T Consensus 234 -------lG----e-----------r~GN~~lE~vv~~L~ 251 (325)
T 3eeg_A 234 -------IG----E-----------RAGNTALEEVVMAME 251 (325)
T ss_dssp -------CC----S-----------TTCCCBHHHHHHHHH
T ss_pred -------cc----c-----------cccchhHHHHHHHHH
Confidence 00 0 479998877776664
No 394
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=29.85 E-value=3.3e+02 Score=27.56 Aligned_cols=86 Identities=20% Similarity=0.258 Sum_probs=54.1
Q ss_pred HHHHHHhCCCceEEEeeccCCC--ChHHHHHHHHHHHhCCCc--eEEEEE-ecc----HHHHHHHHHCCCcEEEECcCCC
Q psy3862 122 LKEILAALPEIEYICLDVANGY--TQTFVDFVRRIREMYPKH--VIIAGN-VVT----GEMVEELILSGADVIKVGIGPG 192 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~G~--~~~~~~~ik~lr~~~P~~--~li~g~-v~t----~e~a~~Li~AGaD~IvVdga~G 192 (671)
++.+.+. +++.|.+....|. |..+.++++.+++.+|.. ..+.-- -.| ...+.+.+++|||.|.....+
T Consensus 156 ~~~~~~~--G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~G- 232 (293)
T 3ewb_X 156 VQTAIDA--GATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTING- 232 (293)
T ss_dssp HHHHHHT--TCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGG-
T ss_pred HHHHHHc--CCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeeccc-
Confidence 4445555 6777877666665 577788899988888853 223322 122 356667889999988442211
Q ss_pred ceEEEEecccCCcchhhhhccccCCccccccHHHHHHHH
Q psy3862 193 SVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELI 231 (671)
Q Consensus 193 ~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li 231 (671)
+. . .+||+.|-+-+..|-
T Consensus 233 ------lG----e-----------raGN~~~E~vv~~L~ 250 (293)
T 3ewb_X 233 ------IG----E-----------RAGNTALEEVAVALH 250 (293)
T ss_dssp ------CC----T-----------TTCBCBHHHHHHHHH
T ss_pred ------cc----c-----------ccccHhHHHHHHHHH
Confidence 00 0 489998877776664
No 395
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=29.80 E-value=77 Score=27.44 Aligned_cols=64 Identities=13% Similarity=0.049 Sum_probs=36.4
Q ss_pred eccH-HHHHHHHHCCCcEEEECcCC-Cce---EEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEE
Q psy3862 168 VVTG-EMVEELILSGADVIKVGIGP-GSV---CTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVI 238 (671)
Q Consensus 168 v~t~-e~a~~Li~AGaD~IvVdga~-G~~---~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgv 238 (671)
..+. +..+.+.+...|+|++|..- +.. ....+++..+..+++ +-.+-.+.+....++.+||+++
T Consensus 47 ~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii-------~~s~~~~~~~~~~~~~~g~~~~ 115 (152)
T 3eul_A 47 ADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVL-------LISAHDEPAIVYQALQQGAAGF 115 (152)
T ss_dssp ESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEE-------EEESCCCHHHHHHHHHTTCSEE
T ss_pred eCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEE-------EEEccCCHHHHHHHHHcCCCEE
Confidence 3444 44444556778999998732 211 122233222322111 3455567788889999999998
No 396
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=29.79 E-value=3e+02 Score=32.18 Aligned_cols=63 Identities=11% Similarity=0.246 Sum_probs=39.3
Q ss_pred HHHHHHhCCCceEEEeeccC-CCChHHHHHHHHHHHhCC-CceEEEEEeccHHHHHHHHHCCCcEEE
Q psy3862 122 LKEILAALPEIEYICLDVAN-GYTQTFVDFVRRIREMYP-KHVIIAGNVVTGEMVEELILSGADVIK 186 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~-G~~~~~~~~ik~lr~~~P-~~~li~g~v~t~e~a~~Li~AGaD~Iv 186 (671)
+....+. ++++|.+.... .|.....+.++.+++..+ ...+++|.+.-.+..+.|.++|+|.+.
T Consensus 648 v~aA~e~--~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivGG~~P~~d~~~l~~~GaD~~f 712 (762)
T 2xij_A 648 AQQAVDA--DVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCGGVIPPQDYEFLFEVGVSNVF 712 (762)
T ss_dssp HHHHHHT--TCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHHTCCEEE
T ss_pred HHHHHHc--CCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCcccHHHHHhCCCCEEe
Confidence 3444555 56777776554 344555666777777654 556667653333355668899999994
No 397
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=29.76 E-value=1.7e+02 Score=29.93 Aligned_cols=13 Identities=31% Similarity=0.524 Sum_probs=11.5
Q ss_pred eeCcceEecCCCC
Q psy3862 330 YQGVPIIAANMDT 342 (671)
Q Consensus 330 ~~~iPiIaa~MDt 342 (671)
.+|+|+++..||.
T Consensus 89 e~Glp~~Tev~d~ 101 (285)
T 3sz8_A 89 RFGVPVITDVHEA 101 (285)
T ss_dssp HHCCCEEEECCSG
T ss_pred hcCCeEEEEeCCH
Confidence 5799999999996
No 398
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=29.33 E-value=88 Score=31.42 Aligned_cols=67 Identities=13% Similarity=0.092 Sum_probs=39.9
Q ss_pred ccHHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccccC---CccccccHHHHHHHHHcCCCEEEE
Q psy3862 169 VTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIP---QAGNVVTGEMVEELILSGADVIKV 240 (671)
Q Consensus 169 ~t~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p---~aGnV~t~~~a~~li~aGAdgvkV 240 (671)
..++.++.+..+|+|+|++|.-|+-.....+... +...+....-| +-+ .+....+.++++|+|||.+
T Consensus 25 ~~p~~~e~a~~~g~D~vilDlEhav~~~~k~~~~---l~a~~~~~~~~~VRVn~--~~~~di~~~ld~G~~gI~l 94 (261)
T 3qz6_A 25 YNPDIVRIYAEAGLDYFIVDCEHAAYTFREINHL---VSVAKNAGVSVLVRIPQ--VDRAHVQRLLDIGAEGFMI 94 (261)
T ss_dssp CCTTHHHHHHHTTCSEEEEESSSSCCCHHHHHHH---HHHHHHHTCEEEEECSS--CCHHHHHHHHHHTCCEEEE
T ss_pred CCHHHHHHHhcCCcCEEEEeccCCCCCHHHHHHH---HHHHhhcCCeEEEEeCC--CCHHHHHHHHhcCCCEEEE
Confidence 5689999999999999999999985311111000 00000000001 222 2446888999999998854
No 399
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=28.07 E-value=1.3e+02 Score=32.17 Aligned_cols=68 Identities=19% Similarity=0.060 Sum_probs=51.5
Q ss_pred CCCC-CCHHHHHHHHHc--CCeEEEccC-----CCHHHHHHHHhc------CcccccceeeecccChhhHHHHHHcCCcE
Q psy3862 340 MDTV-GTFEMAKHLAKH--GLFTTIHKY-----YTLEEWKAFAVQ------NPDVIKHVADGGCTSPGDVAKAMGAGADF 405 (671)
Q Consensus 340 MDtV-~~~~mA~~la~~--Gglgvihr~-----~~~e~~~~~v~~------~~~~~~~v~~~~~~~~~~~~~l~~aG~d~ 405 (671)
.||. ++.+-|+..++. |.-++.+=+ -++.++.+.+++ .|+ ..+.+|++.+++.+..+.+.|+|+
T Consensus 217 vDT~d~~~~~al~~a~~l~~~d~IrlDs~~~~~gd~~~~v~~v~~~ld~~G~~~--~~I~aSggl~~~~i~~l~~~GvD~ 294 (398)
T 2i1o_A 217 IDTYMDEKFAAIKIAEMFDKVDYIRLDTPSSRRGNFEALIREVRWELALRGRSD--IKIMVSGGLDENTVKKLREAGAEA 294 (398)
T ss_dssp CCSSSCHHHHHHHHHTTCSCCCEEEECCCGGGCSCHHHHHHHHHHHHHHTTCTT--SEEEEESSCCHHHHHHHHHTTCCE
T ss_pred EcCchHHHHHHHHHHHhhcCCcEEEeCCCCCCcccHHHHHHHHHHHHHhCCCCc--eEEEEeCCCCHHHHHHHHHcCCCE
Confidence 4665 335556665666 888999988 667888887763 223 357789999999999999999999
Q ss_pred EEEc
Q psy3862 406 VMLG 409 (671)
Q Consensus 406 i~id 409 (671)
|-+.
T Consensus 295 ~gvG 298 (398)
T 2i1o_A 295 FGVG 298 (398)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9987
No 400
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=27.97 E-value=3.3e+02 Score=28.23 Aligned_cols=138 Identities=16% Similarity=0.094 Sum_probs=78.7
Q ss_pred ChhhH-HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhC-CCceEE-EEEe-ccH----HHHHHHHHCCCcEEE
Q psy3862 115 SAKDL-AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMY-PKHVII-AGNV-VTG----EMVEELILSGADVIK 186 (671)
Q Consensus 115 ~~~d~-~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~-P~~~li-~g~v-~t~----e~a~~Li~AGaD~Iv 186 (671)
+++++ +.+...++. +.+.+-+...++..+...+.++.+|+.. |...+. -+|. .+. +.++.|.+.|++.|-
T Consensus 146 ~~e~~~~~a~~~~~~--Gf~~iKik~g~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 223 (371)
T 2ovl_A 146 PVADLKTQADRFLAG--GFRAIKMKVGRPDLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWIE 223 (371)
T ss_dssp CHHHHHHHHHHHHHT--TCSCEEEECCCSSHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEEE
T ss_pred CHHHHHHHHHHHHHc--CCCEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 34443 345555665 5555555555444566678888887764 554443 2332 233 455667778999882
Q ss_pred ECcCCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEEEcccCCCccccceecccCcch
Q psy3862 187 VGIGPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIKVGIGPGSVCTTRLKTGVGYPQ 260 (671)
Q Consensus 187 Vdga~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-AdgvkVG~~~~~~~~Tr~V~gv~~~~ 260 (671)
- . +.. .++.....+. .+| ..+.+.|.+.++.+++.| +|.|.+.+. -+| -
T Consensus 224 q----P------~~~--~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~-----------~~G--G 278 (371)
T 2ovl_A 224 E----P------TIP--DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVS-----------NIG--G 278 (371)
T ss_dssp C----C------SCT--TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTT-----------TTT--S
T ss_pred C----C------CCc--ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCcc-----------ccC--C
Confidence 1 0 000 0111111121 357 467788999999999876 788877632 222 2
Q ss_pred hhhHHHHHHHhhhcCCcch
Q psy3862 261 FSAVLECADAAHGLGGHII 279 (671)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~ 279 (671)
++...+.++.|+.+|++++
T Consensus 279 i~~~~~i~~~A~~~gi~~~ 297 (371)
T 2ovl_A 279 YTTFRKVAALAEANNMLLT 297 (371)
T ss_dssp HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHcCCeEc
Confidence 5566677777777776544
No 401
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=27.94 E-value=49 Score=34.25 Aligned_cols=25 Identities=32% Similarity=0.515 Sum_probs=20.8
Q ss_pred Cc-cccccHHHHHHHHH----cC-----CCEEEEc
Q psy3862 217 QA-GNVVTGEMVEELIL----SG-----ADVIKVG 241 (671)
Q Consensus 217 ~a-GnV~t~~~a~~li~----aG-----AdgvkVG 241 (671)
++ |||-|.+++.++++ +| ++.+|+|
T Consensus 236 As~GGIrt~e~A~~~i~~~~elG~~wl~~~~fRiG 270 (297)
T 4eiv_A 236 IEVGDVHMAETADFLMQMIFENGPRSIVRDKFRVG 270 (297)
T ss_dssp EECTTCCHHHHHHHHHHHHHHHCGGGCSTTTEEEE
T ss_pred ecCCCCCCHHHHHHHHHHHHHhCccccCCCceEec
Confidence 67 99999999999999 33 5667777
No 402
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=27.51 E-value=1.1e+02 Score=32.34 Aligned_cols=63 Identities=30% Similarity=0.399 Sum_probs=38.7
Q ss_pred HHHHHHhCCCceEEEeeccC--CCChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCC-CcEEEE
Q psy3862 122 LKEILAALPEIEYICLDVAN--GYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSG-ADVIKV 187 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~--G~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AG-aD~IvV 187 (671)
++.+.++ +++++.+.... +.+..-.+.++++++..+...+.+|.+ +.+.++.+++.| ||+|-+
T Consensus 256 a~~l~~~--G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 256 AALLNKH--RIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGRY-NAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp HHHHHHT--TCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEC
T ss_pred HHHHHHc--CCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeCCC-CHHHHHHHHHCCCcceehh
Confidence 3444444 67887765321 111111255666776665433444566 899999999998 999955
No 403
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=27.08 E-value=93 Score=29.08 Aligned_cols=64 Identities=27% Similarity=0.345 Sum_probs=39.5
Q ss_pred HHHHHHHHHCCCc-EEEECc-CCCceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 171 GEMVEELILSGAD-VIKVGI-GPGSVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 171 ~e~a~~Li~AGaD-~IvVdg-a~G~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
.+.++.+...|+. ++..+. ..|+. +.. ....+..+. .+| +.|++.+.+.+..++++||||+-+|
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~~------~g~-~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg 203 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGTK------SGY-DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA 203 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTCC------SCC-CHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCcc------ccc-cHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcHHHhhh
Confidence 4667777778887 444432 33321 000 011111111 345 6788999999999999999999888
No 404
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=26.90 E-value=1e+02 Score=25.94 Aligned_cols=64 Identities=14% Similarity=0.214 Sum_probs=35.7
Q ss_pred eccHH-HHHHHHHCCCcEEEECcC-CCce---EEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEE
Q psy3862 168 VVTGE-MVEELILSGADVIKVGIG-PGSV---CTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVI 238 (671)
Q Consensus 168 v~t~e-~a~~Li~AGaD~IvVdga-~G~~---~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgv 238 (671)
..+.+ ..+.+.+...|++++|.. ++.. ..+.+++..+..+++ +-.+-.+.+....++.+||++.
T Consensus 35 ~~~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii-------~ls~~~~~~~~~~~~~~ga~~~ 103 (133)
T 3b2n_A 35 TDNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVI-------IVTTFKRPGYFEKAVVNDVDAY 103 (133)
T ss_dssp ESCHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEE-------EEESCCCHHHHHHHHHTTCSEE
T ss_pred cCCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEE-------EEecCCCHHHHHHHHHcCCcEE
Confidence 33443 344444557899999873 2211 122333322322221 3444556778888999999987
No 405
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=26.29 E-value=34 Score=33.05 Aligned_cols=108 Identities=12% Similarity=0.016 Sum_probs=0.0
Q ss_pred HHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhCCCceEEEE-EeccHHHHHHHHHCCCcEEEE--------CcCCC
Q psy3862 122 LKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAG-NVVTGEMVEELILSGADVIKV--------GIGPG 192 (671)
Q Consensus 122 l~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~P~~~li~g-~v~t~e~a~~Li~AGaD~IvV--------dga~G 192 (671)
...+.++ +++.+++....+. ..+...++.+++......+..- ++. ...++.+.+.|.+-+++ -|..|
T Consensus 73 ~~~~~~~--Gad~itvh~~~g~-~~l~~~~~~~~~~g~~~~~~ll~~~t-~~~~~~l~~~~~~~~vl~~a~~~~~~G~~g 148 (216)
T 1q6o_A 73 SRMCFEA--NADWVTVICCADI-NTAKGALDVAKEFNGDVQIELTGYWT-WEQAQQWRDAGIGQVVYHRSRDAQAAGVAW 148 (216)
T ss_dssp HHHHHHT--TCSEEEEETTSCH-HHHHHHHHHHHHTTCEEEEEECSCCC-HHHHHHHHHTTCCEEEEECCHHHHHTTCCC
T ss_pred HHHHHhC--CCCEEEEeccCCH-HHHHHHHHHHHHcCCCceeeeeeCCC-hhhHHHHHhcCcHHHHHHHHHHHHhcCCCC
Q ss_pred -ceEEEEecccCC-cchhhhhccccCCccccccHHHHHHHHHcCCCEEEEc
Q psy3862 193 -SVCTTRLKNKTS-DFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 193 -~~~~t~v~~~~~-~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
..-+..+++..+ ++++. +.|||- .+.+..++++|||++=||
T Consensus 149 ~~~~i~~lr~~~~~~~~i~-------v~GGI~-~~~~~~~~~aGad~ivvG 191 (216)
T 1q6o_A 149 GEADITAIKRLSDMGFKVT-------VTGGLA-LEDLPLFKGIPIHVFIAG 191 (216)
T ss_dssp CHHHHHHHHHHHHTTCEEE-------EESSCC-GGGGGGGTTSCCSEEEES
T ss_pred CHHHHHHHHHhcCCCCcEE-------EECCcC-hhhHHHHHHcCCCEEEEe
No 406
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=25.63 E-value=1.1e+02 Score=32.08 Aligned_cols=31 Identities=13% Similarity=0.217 Sum_probs=26.2
Q ss_pred EEEEeccHHHHHHHHHCCCcEEEECcCCCce
Q psy3862 164 IAGNVVTGEMVEELILSGADVIKVGIGPGSV 194 (671)
Q Consensus 164 i~g~v~t~e~a~~Li~AGaD~IvVdga~G~~ 194 (671)
+..++.+++.++.+..+|+|+|.+|..|+-.
T Consensus 46 ~~l~i~~p~~~e~a~~~GaD~vilDlEha~~ 76 (339)
T 1izc_A 46 VAHGIPSTFVTKVLAATKPDFVWIDVEHGMF 76 (339)
T ss_dssp EEECSCCHHHHHHHHHTCCSEEEEETTTSCC
T ss_pred EEEECCCHHHHHHHHhCCCCEEEEECCCCCC
Confidence 3446778999999999999999999988753
No 407
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=25.52 E-value=3.6e+02 Score=28.04 Aligned_cols=126 Identities=16% Similarity=0.108 Sum_probs=0.0
Q ss_pred CChhhHHHHHH--------HHHhCCCceEEEeeccCCC------------------------ChHHHHHHHHHHHhCCCc
Q psy3862 114 ISAKDLAGLKE--------ILAALPEIEYICLDVANGY------------------------TQTFVDFVRRIREMYPKH 161 (671)
Q Consensus 114 ~~~~d~~rl~~--------l~~a~~~~d~Ivld~a~G~------------------------~~~~~~~ik~lr~~~P~~ 161 (671)
++.+|++++.+ ..++ +.|.|-+..+||+ .+-.++.++.+|+..+.-
T Consensus 142 mt~~eI~~ii~~F~~AA~rA~~A--GFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~ 219 (358)
T 4a3u_A 142 LRLDEIPRLLDDYEKAARHALKA--GFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKE 219 (358)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHT--TCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHc--CCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCcc
Q ss_pred eEEEEEecc---------------HHHHHHHHHCCCcEEEECcCCCceEEEEecccCCcchhhhhccccCCccccccHHH
Q psy3862 162 VIIAGNVVT---------------GEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEM 226 (671)
Q Consensus 162 ~li~g~v~t---------------~e~a~~Li~AGaD~IvVdga~G~~~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~ 226 (671)
.+..---.+ ...++.+.++|+|.+-+..+.-...........-.-.+.+......++|++-|.+.
T Consensus 220 ~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~~~~v~~~g~~~~~~ 299 (358)
T 4a3u_A 220 RTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVFKPPLVLNQDYTFET 299 (358)
T ss_dssp GEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHCCSCEEEESSCCHHH
T ss_pred ceEEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHHhcCCcEEEeCCCCHHH
Q ss_pred HHHHHHcC-CCEEEEc
Q psy3862 227 VEELILSG-ADVIKVG 241 (671)
Q Consensus 227 a~~li~aG-AdgvkVG 241 (671)
+.++|+.| ||.|=+|
T Consensus 300 ae~~l~~G~aD~V~~g 315 (358)
T 4a3u_A 300 AQAALDSGVADAISFG 315 (358)
T ss_dssp HHHHHHHTSCSEEEES
T ss_pred HHHHHHcCCceEeHhh
No 408
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=25.32 E-value=53 Score=33.07 Aligned_cols=69 Identities=23% Similarity=0.238 Sum_probs=38.3
Q ss_pred cChhhHHHHHHcCCcEEEEccccccccccccccccccccccccccccccccCc-ee--eccccCchhHHHHHHcCCcEEE
Q psy3862 390 TSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGG-VV--DGGCTSPGDVAKAMGAGADFVM 466 (671)
Q Consensus 390 ~~~~~~~~l~~aG~d~i~id~~a~gh~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i--~gG~v~t~~~a~~l~aGAd~V~ 466 (671)
.+++.++++..+|+|+++|| -+|+....+.+. . .+..+. +.+. .+ +-+ ..+.++..++++|+|+|+
T Consensus 25 ~~p~~~e~a~~~g~D~vilD---lEhav~~~~k~~---~---~l~a~~-~~~~~~~VRVn~-~~~~di~~~ld~G~~gI~ 93 (261)
T 3qz6_A 25 YNPDIVRIYAEAGLDYFIVD---CEHAAYTFREIN---H---LVSVAK-NAGVSVLVRIPQ-VDRAHVQRLLDIGAEGFM 93 (261)
T ss_dssp CCTTHHHHHHHTTCSEEEEE---SSSSCCCHHHHH---H---HHHHHH-HHTCEEEEECSS-CCHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHhcCCcCEEEEe---ccCCCCCHHHHH---H---HHHHHh-hcCCeEEEEeCC-CCHHHHHHHHhcCCCEEE
Confidence 35678888899999999999 555432222110 0 000000 1111 11 111 234566667899999998
Q ss_pred ECc
Q psy3862 467 LGG 469 (671)
Q Consensus 467 vG~ 469 (671)
+=.
T Consensus 94 lP~ 96 (261)
T 3qz6_A 94 IPG 96 (261)
T ss_dssp ETT
T ss_pred ECC
Confidence 863
No 409
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=25.30 E-value=1.4e+02 Score=25.30 Aligned_cols=63 Identities=13% Similarity=0.184 Sum_probs=35.9
Q ss_pred ccHHHH-HHHHHCCCcEEEECcCCCc-e---EEEEecc--cCCcchhhhhccccCCccccccHHHHHHHHHcCCCEE
Q psy3862 169 VTGEMV-EELILSGADVIKVGIGPGS-V---CTTRLKN--KTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVI 238 (671)
Q Consensus 169 ~t~e~a-~~Li~AGaD~IvVdga~G~-~---~~t~v~~--~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgv 238 (671)
.+.+.+ +.+.+...|+|++|..-.. . ....+++ ..+.++++ +-.+-.+.+....++++||+++
T Consensus 38 ~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii-------~~s~~~~~~~~~~~~~~ga~~~ 107 (144)
T 3kht_A 38 DNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIV-------ILTDNVSDDRAKQCMAAGASSV 107 (144)
T ss_dssp SSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEE-------EEETTCCHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEE-------EEeCCCCHHHHHHHHHcCCCEE
Confidence 444444 4444567899999973221 1 2223332 12222111 3444567788889999999998
No 410
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=24.76 E-value=35 Score=35.32 Aligned_cols=65 Identities=22% Similarity=0.359 Sum_probs=36.5
Q ss_pred HHHHHHHHHCCCcEEEECcC---CCceEEE---EecccCCcchhhhhcc--ccCCccccccHHHHHHHHHcCCCEE
Q psy3862 171 GEMVEELILSGADVIKVGIG---PGSVCTT---RLKNKTSDFFLIQFYS--CIPQAGNVVTGEMVEELILSGADVI 238 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga---~G~~~~t---~v~~~~~~~~~i~~i~--~~p~aGnV~t~~~a~~li~aGAdgv 238 (671)
.+.++.+++.|||+|.|.+. +|...+. ++.. =+++++.+. .+|+.=-.-..+-+++++++||+-|
T Consensus 55 ~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~R---v~pvI~~l~~~~vpiSIDT~~~~Va~aAl~aGa~iI 127 (294)
T 2dqw_A 55 LERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRR---LLPVLEAVLSLGVPVSVDTRKPEVAEEALKLGAHLL 127 (294)
T ss_dssp HHHHHHHHHHTCSEEEEECC-----------CCHHHH---HHHHHHHHHTTCSCEEEECSCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHH---HHHHHHHHHhCCCeEEEECCCHHHHHHHHHhCCCEE
Confidence 47899999999999999772 3432111 1110 012222222 2333222346788999999999944
No 411
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=24.41 E-value=87 Score=31.21 Aligned_cols=28 Identities=14% Similarity=0.128 Sum_probs=17.3
Q ss_pred HHHHHHHcCCeEEEc--cCCCHHHHHHHHh
Q psy3862 348 MAKHLAKHGLFTTIH--KYYTLEEWKAFAV 375 (671)
Q Consensus 348 mA~~la~~Gglgvih--r~~~~e~~~~~v~ 375 (671)
|...+-+.-|+-+++ .+.++|+..+.+.
T Consensus 142 iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~ 171 (258)
T 2i2x_B 142 IVTALLRANGYNVVDLGRDVPAEEVLAAVQ 171 (258)
T ss_dssp HHHHHHHHTTCEEEEEEEECCSHHHHHHHH
T ss_pred HHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 444555566777665 4667777766654
No 412
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=24.33 E-value=37 Score=32.88 Aligned_cols=24 Identities=38% Similarity=0.371 Sum_probs=21.6
Q ss_pred CccccccHHHHHHHHHcCCCEEEEc
Q psy3862 217 QAGNVVTGEMVEELILSGADVIKVG 241 (671)
Q Consensus 217 ~aGnV~t~~~a~~li~aGAdgvkVG 241 (671)
++|.|-|.+.+.+ +++||++|-.|
T Consensus 154 aGGlI~t~edv~~-l~aGA~aIsTs 177 (188)
T 1vkf_A 154 AAGLVETEEEARE-ILKHVSAISTS 177 (188)
T ss_dssp EESCCCSHHHHHH-HTTTSSEEEEC
T ss_pred EECCcCCHHHHHH-HHCCCeEEEeC
Confidence 6888999999999 99999999555
No 413
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=23.91 E-value=2.7e+02 Score=28.21 Aligned_cols=15 Identities=20% Similarity=0.350 Sum_probs=12.3
Q ss_pred eeCcceEecCCCCCC
Q psy3862 330 YQGVPIIAANMDTVG 344 (671)
Q Consensus 330 ~~~iPiIaa~MDtV~ 344 (671)
.+|+|+++..+|...
T Consensus 84 ~~Gl~~~te~~d~~~ 98 (280)
T 2qkf_A 84 EFGIPVITDVHEPHQ 98 (280)
T ss_dssp HHCCCEEEECCSGGG
T ss_pred HcCCcEEEecCCHHH
Confidence 579999999999643
No 414
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=23.63 E-value=34 Score=35.34 Aligned_cols=65 Identities=23% Similarity=0.364 Sum_probs=38.0
Q ss_pred HHHHHHHHHCCCcEEEECc---CCCceEEE---EecccCCcchhhhhcc--ccCCccccccHHHHHHHHHcCCCEE
Q psy3862 171 GEMVEELILSGADVIKVGI---GPGSVCTT---RLKNKTSDFFLIQFYS--CIPQAGNVVTGEMVEELILSGADVI 238 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdg---a~G~~~~t---~v~~~~~~~~~i~~i~--~~p~aGnV~t~~~a~~li~aGAdgv 238 (671)
.+.++.++++|||+|.|.+ .+|...+. ++.. -+++++.+. .+|+.=---..+-+++++++||+-|
T Consensus 49 ~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~R---v~pvi~~l~~~~vpiSIDT~~~~Va~aAl~aGa~iI 121 (294)
T 2y5s_A 49 LRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELAR---VIPLVEALRPLNVPLSIDTYKPAVMRAALAAGADLI 121 (294)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHH---HHHHHHHHGGGCSCEEEECCCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHH---HHHHHHHHhhCCCeEEEECCCHHHHHHHHHcCCCEE
Confidence 3678899999999999987 24532111 1110 012222222 2332222346788999999999766
No 415
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=23.49 E-value=3.2e+02 Score=27.86 Aligned_cols=15 Identities=27% Similarity=0.239 Sum_probs=12.1
Q ss_pred eeeCcceEecCCCCC
Q psy3862 329 TYQGVPIIAANMDTV 343 (671)
Q Consensus 329 ~~~~iPiIaa~MDtV 343 (671)
..+|+|+++..+|..
T Consensus 86 ~~~Glp~~te~~d~~ 100 (292)
T 1o60_A 86 DTFGVKIITDVHEIY 100 (292)
T ss_dssp HHHCCEEEEECCSGG
T ss_pred HHcCCcEEEecCCHH
Confidence 357899999999864
No 416
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=23.15 E-value=5.8e+02 Score=25.63 Aligned_cols=162 Identities=17% Similarity=0.169 Sum_probs=91.4
Q ss_pred eccHHHHHHHHHCCCcEEEECc---CCCceEEEEecccCCcchhhhhcc---cc-------CCccccc-cH-------HH
Q psy3862 168 VVTGEMVEELILSGADVIKVGI---GPGSVCTTRLKNKTSDFFLIQFYS---CI-------PQAGNVV-TG-------EM 226 (671)
Q Consensus 168 v~t~e~a~~Li~AGaD~IvVdg---a~G~~~~t~v~~~~~~~~~i~~i~---~~-------p~aGnV~-t~-------~~ 226 (671)
+.+.+.+..+.++|||-|-+-+ .+|.. |+.-++..+. .+ |-+|+-. +. +.
T Consensus 8 ~~s~~~a~~A~~~GAdRIELc~~L~~GGlT---------PS~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~D 78 (256)
T 1twd_A 8 CYSMECALTAQQNGADRVELCAAPKEGGLT---------PSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILED 78 (256)
T ss_dssp ESSHHHHHHHHHTTCSEEEECBCGGGTCBC---------CCHHHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHH
T ss_pred eCCHHHHHHHHHcCCCEEEEcCCcccCCCC---------CCHHHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHH
Confidence 3567899999999999999887 23322 3322222221 12 4567665 43 34
Q ss_pred HHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHHHhhhcCCcchhhhhhccceeeccccCCCceeeeecCC
Q psy3862 227 VEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKR 306 (671)
Q Consensus 227 a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~fdDVll~P~r 306 (671)
++.+.++|||||=+| |-|. =|.--..+..+-.++|+++
T Consensus 79 i~~~~~~GadGvV~G------~Lt~----dg~iD~~~~~~Li~~a~~~-------------------------------- 116 (256)
T 1twd_A 79 VRTVRELGFPGLVTG------VLDV----DGNVDMPRMEKIMAAAGPL-------------------------------- 116 (256)
T ss_dssp HHHHHHTTCSEEEEC------CBCT----TSSBCHHHHHHHHHHHTTS--------------------------------
T ss_pred HHHHHHcCCCEEEEe------eECC----CCCcCHHHHHHHHHHhCCC--------------------------------
Confidence 556778999999888 3333 2444445555555555532
Q ss_pred CccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHH-HHHHHcCCeEEEcc------CCCHHHHHHHHhcCcc
Q psy3862 307 STLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMA-KHLAKHGLFTTIHK------YYTLEEWKAFAVQNPD 379 (671)
Q Consensus 307 st~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA-~~la~~Gglgvihr------~~~~e~~~~~v~~~~~ 379 (671)
. +||. =+.|-+.++.-| ..|..+|-=.+|-- ...++.+.+.+.+..
T Consensus 117 -----------~--vTFH-------------RAfD~~~d~~~ale~L~~lG~~rILTSG~~~~a~~g~~~L~~Lv~~a~- 169 (256)
T 1twd_A 117 -----------A--VTFH-------------RAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAHRD- 169 (256)
T ss_dssp -----------E--EEEC-------------GGGGGCSCHHHHHHHHHHHTCCEEEECTTSSSTTTTHHHHHHHHTSSS-
T ss_pred -----------c--EEEE-------------CchhccCCHHHHHHHHHHcCCCEEECCCCCCCHHHHHHHHHHHHHhhC-
Confidence 1 2221 023444444433 34666665555542 223444455444322
Q ss_pred cccceeeecccChhhHHHHHHcCCcEEEE
Q psy3862 380 VIKHVADGGCTSPGDVAKAMGAGADFVML 408 (671)
Q Consensus 380 ~~~~v~~~~~~~~~~~~~l~~aG~d~i~i 408 (671)
-..+-+.+|++++-+.++++.|++-+-.
T Consensus 170 -~i~Im~GgGv~~~Ni~~l~~tGv~e~H~ 197 (256)
T 1twd_A 170 -APIIMAGAGVRAENLHHFLDAGVLEVHS 197 (256)
T ss_dssp -CCEEEEESSCCTTTHHHHHHHTCSEEEE
T ss_pred -CcEEEecCCcCHHHHHHHHHcCCCeEeE
Confidence 2346677888887777777778877764
No 417
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=23.08 E-value=78 Score=36.04 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=25.8
Q ss_pred ccccccccccCc-eeeccccCchhHHH-HHHcC-CcEEEEC
Q psy3862 431 PLVGDMNSYLGG-VVDGGCTSPGDVAK-AMGAG-ADFVMLG 468 (671)
Q Consensus 431 ~~~~~~~~~~~~-~i~gG~v~t~~~a~-~l~aG-Ad~V~vG 468 (671)
+++..+|+...- ++..|.+.+.+.++ +++.| ||.|++|
T Consensus 284 ~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~g 324 (690)
T 3k30_A 284 EFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAA 324 (690)
T ss_dssp HHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcceEEEc
Confidence 344555655543 55566677777776 57777 9999999
No 418
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=22.81 E-value=4.1e+02 Score=27.16 Aligned_cols=39 Identities=21% Similarity=0.218 Sum_probs=29.1
Q ss_pred HHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHHH
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECAD 269 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~~ 269 (671)
+-+..+++.|+||+-+. +||-|-...-.-.-..+++.+.
T Consensus 49 ~lv~~li~~Gv~Gi~v~------GtTGE~~~Ls~~Er~~v~~~~v 87 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPL------GSTGEGAYLSDPEWDEVVDFTL 87 (315)
T ss_dssp HHHHHHHHTTCSEEECS------SGGGTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEC------ccccChhhCCHHHHHHHHHHHH
Confidence 44556678999999877 6888877777777777777653
No 419
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=22.63 E-value=6.3e+02 Score=25.78 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=36.0
Q ss_pred HHHHHHHHhCCCceEEEeecc---CCC--------ChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEE
Q psy3862 120 AGLKEILAALPEIEYICLDVA---NGY--------TQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVI 185 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a---~G~--------~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~I 185 (671)
++++++++. ++++|-+... +|. ...++..++.+++.+. ..+ .---...+-+++.+++|+|.|
T Consensus 67 ~~a~~~v~~--GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~-vpi-SIDT~~~~V~~aAl~aGa~iI 139 (297)
T 1tx2_A 67 RHAKEMRDE--GAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVK-LPI-SIDTYKAEVAKQAIEAGAHII 139 (297)
T ss_dssp HHHHHHHHT--TCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSC-SCE-EEECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHc--CCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCC-ceE-EEeCCCHHHHHHHHHcCCCEE
Confidence 456677777 7777766521 121 1334555566665431 111 112245788999999999999
No 420
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=22.52 E-value=6.8e+02 Score=26.12 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=81.1
Q ss_pred CChhhH-HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhC-CCceEEE-EEe-ccH----HHHHHHHHCCCcEE
Q psy3862 114 ISAKDL-AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMY-PKHVIIA-GNV-VTG----EMVEELILSGADVI 185 (671)
Q Consensus 114 ~~~~d~-~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~-P~~~li~-g~v-~t~----e~a~~Li~AGaD~I 185 (671)
.+++++ +.++..++. +...+-+.... .++..++.++.+|+.. |+..+.. +|. -+. +.++.|.+.|++.|
T Consensus 150 ~~~e~~~~~a~~~~~~--G~~~iKiKvG~-~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i 226 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQ--GFTAAKLKVGR-APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWF 226 (389)
T ss_dssp CCHHHHHHHHHHHHHT--TCSEEEEECCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHC--CCCEEeeccCC-CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEE
Confidence 344444 455666665 55555555332 3466778888888765 6655443 332 233 44577888999999
Q ss_pred EECcCCCceEEEEecccCCcchhhhhcc----ccC--CccccccHHHHHHHHHcC-CCEEEEcccCCCccccceecccCc
Q psy3862 186 KVGIGPGSVCTTRLKNKTSDFFLIQFYS----CIP--QAGNVVTGEMVEELILSG-ADVIKVGIGPGSVCTTRLKTGVGY 258 (671)
Q Consensus 186 vVdga~G~~~~t~v~~~~~~~~~i~~i~----~~p--~aGnV~t~~~a~~li~aG-AdgvkVG~~~~~~~~Tr~V~gv~~ 258 (671)
---..+. ++.....+. .+| ..+++.+.+.++.+++.| +|.|.+-+. -+|
T Consensus 227 EqP~~~~------------d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~-----------~~G- 282 (389)
T 3ozy_A 227 EEPLSID------------DIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADAS-----------RAG- 282 (389)
T ss_dssp ESCSCTT------------CHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTT-----------TSS-
T ss_pred ECCCCcc------------cHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcc-----------ccC-
Confidence 3111110 111111121 256 466788999999999876 788866532 222
Q ss_pred chhhhHHHHHHHhhhcCCcchh
Q psy3862 259 PQFSAVLECADAAHGLGGHIIS 280 (671)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~ 280 (671)
-++..++.++.|+.+|+++..
T Consensus 283 -Git~~~~ia~~A~~~gi~~~~ 303 (389)
T 3ozy_A 283 -GITEALAISASAASAHLAWNP 303 (389)
T ss_dssp -CHHHHHHHHHHHHHTTCEECC
T ss_pred -CHHHHHHHHHHHHHcCCEEEe
Confidence 256777778888877765543
No 421
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=22.31 E-value=6e+02 Score=25.93 Aligned_cols=134 Identities=14% Similarity=0.075 Sum_probs=77.2
Q ss_pred HHHHHHHHhCCCceEEEeeccCCCChHHHHHHHHHHHhC-CCceEEE-EEe-ccH----HHHHHHHHCCCcEEEECcCCC
Q psy3862 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMY-PKHVIIA-GNV-VTG----EMVEELILSGADVIKVGIGPG 192 (671)
Q Consensus 120 ~rl~~l~~a~~~~d~Ivld~a~G~~~~~~~~ik~lr~~~-P~~~li~-g~v-~t~----e~a~~Li~AGaD~IvVdga~G 192 (671)
+.+...+++ +.+.+-+...++..+...+.++.+|+.. |...+.. +|. .+. +.++.|.+.|++.|---..+
T Consensus 150 ~~a~~~~~~--Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~- 226 (359)
T 1mdl_A 150 ERAVTAAEL--GFRAVKTRIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQ- 226 (359)
T ss_dssp HHHHHHHHT--TCSEEEEECCCSSHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCEECCSCT-
T ss_pred HHHHHHHHc--CCCEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeEECCCCh-
Confidence 344555555 5566655554434566778888888764 5554433 232 233 44667778899988210000
Q ss_pred ceEEEEecccCCcchhhhhcc---ccC--CccccccHHHHHHHHHcC-CCEEEEcccCCCccccceecccCcchhhhHHH
Q psy3862 193 SVCTTRLKNKTSDFFLIQFYS---CIP--QAGNVVTGEMVEELILSG-ADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLE 266 (671)
Q Consensus 193 ~~~~t~v~~~~~~~~~i~~i~---~~p--~aGnV~t~~~a~~li~aG-AdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~ 266 (671)
.++.....+. .+| ..+.+.|.+.++.+++.| +|.|.+-. +-+| -++...+
T Consensus 227 -----------~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~-----------~~~G--Gi~~~~~ 282 (359)
T 1mdl_A 227 -----------HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDA-----------MKIG--GVTGWIR 282 (359)
T ss_dssp -----------TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBT-----------TTTT--HHHHHHH
T ss_pred -----------hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecc-----------hhhC--CHHHHHH
Confidence 0111111121 356 467788999999999877 78886652 2222 2556667
Q ss_pred HHHHhhhcCCcchh
Q psy3862 267 CADAAHGLGGHIIS 280 (671)
Q Consensus 267 ~~~~~~~~~~~~~~ 280 (671)
.++.|+.+|++++-
T Consensus 283 i~~~A~~~g~~~~~ 296 (359)
T 1mdl_A 283 ASALAQQFGIPMSS 296 (359)
T ss_dssp HHHHHHHTTCCBCC
T ss_pred HHHHHHHcCCeEee
Confidence 77777777765443
No 422
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=22.26 E-value=69 Score=32.96 Aligned_cols=89 Identities=16% Similarity=0.040 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEEEECc-----CCCce---------EEEEecccCCcchhhhhccc
Q psy3862 149 DFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI-----GPGSV---------CTTRLKNKTSDFFLIQFYSC 214 (671)
Q Consensus 149 ~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg-----a~G~~---------~~t~v~~~~~~~~~i~~i~~ 214 (671)
..++++++... .+++-+..+.-.|+.+.++|.|+|-+.+ +.|+. +...++....... ++.+.+
T Consensus 5 ~~lr~l~~~~~--~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~-~PviaD 81 (290)
T 2hjp_A 5 QALRAALDSGR--LFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVS-IPLIAD 81 (290)
T ss_dssp HHHHHHHHHCC--CEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCS-SCEEEE
T ss_pred HHHHHHHhCCC--cEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCC-CCEEEE
Q ss_pred cCCc-cccc-cHHHHHHHHHcCCCEEEE
Q psy3862 215 IPQA-GNVV-TGEMVEELILSGADVIKV 240 (671)
Q Consensus 215 ~p~a-GnV~-t~~~a~~li~aGAdgvkV 240 (671)
.|-+ ||.- ..+.++.++++||+||++
T Consensus 82 ~d~Gyg~~~~~~~~v~~l~~aGa~gv~i 109 (290)
T 2hjp_A 82 IDTGFGNAVNVHYVVPQYEAAGASAIVM 109 (290)
T ss_dssp CTTTTSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCeEEEE
No 423
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=22.03 E-value=1.4e+02 Score=28.49 Aligned_cols=29 Identities=10% Similarity=0.091 Sum_probs=18.8
Q ss_pred HHHHHHHHcCCeEEEc--cCCCHHHHHHHHh
Q psy3862 347 EMAKHLAKHGLFTTIH--KYYTLEEWKAFAV 375 (671)
Q Consensus 347 ~mA~~la~~Gglgvih--r~~~~e~~~~~v~ 375 (671)
.|...+-+.-|+-+++ .+.++|+..+.++
T Consensus 106 ~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~ 136 (210)
T 1y80_A 106 NLVAMMLESGGFTVYNLGVDIEPGKFVEAVK 136 (210)
T ss_dssp HHHHHHHHHTTCEEEECCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 3445555666777776 6667777777664
No 424
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=22.02 E-value=59 Score=32.43 Aligned_cols=79 Identities=14% Similarity=0.082 Sum_probs=50.4
Q ss_pred eCcceEec--CCCCCCC----HHHHHHHHH--------cCCeEEEccCCCHHHHHHHHhcC---c---------ccccce
Q psy3862 331 QGVPIIAA--NMDTVGT----FEMAKHLAK--------HGLFTTIHKYYTLEEWKAFAVQN---P---------DVIKHV 384 (671)
Q Consensus 331 ~~iPiIaa--~MDtV~~----~~mA~~la~--------~Gglgvihr~~~~e~~~~~v~~~---~---------~~~~~v 384 (671)
.+|++.|+ |+|..-+ ..+|..|.. +|-+|-+..-+++++.++.+++. + ..++.|
T Consensus 89 ~~I~ly~~HtnlD~~~~~G~n~~La~~Lgl~~~~~~~g~G~ig~l~~~~t~~~l~~~vk~~l~~~~~~~g~~~~~~i~~V 168 (247)
T 1nmo_A 89 NDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRV 168 (247)
T ss_dssp TTCEEEECCHHHHHCTTTSHHHHHHHHHTEEEEEEEETTEEEEEEEEEECHHHHHHHHHHHHTSCCEEECTTSCSSEEEE
T ss_pred CCCEEEEeeechhhCCCCCHHHHHHHHcCCCCccccCCeEEEEEeCCCCcHHHHHHHHHHHcCCCeEEECCCCcCccCEE
Confidence 46777776 8887644 345555531 34445555578999999888752 1 123445
Q ss_pred eeecccChhhHHHHHHcCCcEEEEc
Q psy3862 385 ADGGCTSPGDVAKAMGAGADFVMLG 409 (671)
Q Consensus 385 ~~~~~~~~~~~~~l~~aG~d~i~id 409 (671)
+..+|....-+..+.++|+|+++-.
T Consensus 169 Av~~GsG~~~~~~a~~~gaD~~iTG 193 (247)
T 1nmo_A 169 AWCTGGGQSFIDSAARFGVDAFITG 193 (247)
T ss_dssp EECSSSCGGGHHHHHHHCCSEEEES
T ss_pred EEECCCcHHHHHHHHHcCCCEEEEc
Confidence 5555555555667788999999854
No 425
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=21.93 E-value=1.8e+02 Score=28.42 Aligned_cols=69 Identities=19% Similarity=0.271 Sum_probs=42.3
Q ss_pred CChhhHHHHHH-HHHhCCCceEEEeeccCC---CChHHHHHHHHHHHhCCCceEEEEEeccHHHHHHHHHCCCcEE
Q psy3862 114 ISAKDLAGLKE-ILAALPEIEYICLDVANG---YTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVI 185 (671)
Q Consensus 114 ~~~~d~~rl~~-l~~a~~~~d~Ivld~a~G---~~~~~~~~ik~lr~~~P~~~li~g~v~t~e~a~~Li~AGaD~I 185 (671)
++++++.++.. .+++ ++|+|-....+. -...-++.+++.. ..|...+++|.+.|.+++.+++++|++-|
T Consensus 130 l~~e~i~~a~~ia~ea--GADfVKTsTGf~~~gat~~dv~~m~~~v-g~~v~VkaaGGirt~~~al~~i~aGa~Ri 202 (220)
T 1ub3_A 130 FSPEEIARLAEAAIRG--GADFLKTSTGFGPRGASLEDVALLVRVA-QGRAQVKAAGGIRDRETALRMLKAGASRL 202 (220)
T ss_dssp SCHHHHHHHHHHHHHH--TCSEEECCCSSSSCCCCHHHHHHHHHHH-TTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHh--CCCEEEeCCCCCCCCCCHHHHHHHHHhh-CCCCeEEEECCCCCHHHHHHHHHCCCccc
Confidence 34444444433 3555 778876654322 1222333343321 34566788888899999999999999966
No 426
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=21.78 E-value=1.6e+02 Score=28.67 Aligned_cols=114 Identities=12% Similarity=0.000 Sum_probs=52.9
Q ss_pred HHHHHHHHcCCeE-EeecCCCHHHH---HHhhhcCcccccceEEecCCChhhHHHHHHHHHhCCCceEEEeeccC-----
Q psy3862 71 EMAKHLAKHGLFT-TIHKYYTLEEW---KAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICLDVAN----- 141 (671)
Q Consensus 71 ~lA~Ala~~gglg-vIh~n~~~Eeq---~~~i~~~p~~~~~~~v~~G~~~~d~~rl~~l~~a~~~~d~Ivld~a~----- 141 (671)
..+.++++.|.=. ++|.....+.. .+.+++.......+++..- +..+.+++.++++. +.+.+++..+.
T Consensus 73 t~~~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~l-ts~~~~~~~~~~~~--~~~~~v~~~a~~~~~~ 149 (221)
T 3exr_A 73 TVAKNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELY-GDWTYDQAQQWLDA--GISQAIYHQSRDALLA 149 (221)
T ss_dssp HHHHHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECC-SSCCHHHHHHHHHT--TCCEEEEECCHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEc-CCCCHHHHHHHHcC--CHHHHHHHHHHhcCCC
Confidence 3455567776444 48876554432 2222221000112333221 11134556666664 44444443221
Q ss_pred CCChHHHHHHHHHHHhC-CCce-EEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 142 GYTQTFVDFVRRIREMY-PKHV-IIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 142 G~~~~~~~~ik~lr~~~-P~~~-li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
|.... .+.++.+|+.. +... .+.|.+ +.+..+.+.++|||++|+++
T Consensus 150 Gvv~s-~~e~~~ir~~~~~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~ 197 (221)
T 3exr_A 150 GETWG-EKDLNKVKKLIEMGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGR 197 (221)
T ss_dssp TCCCC-HHHHHHHHHHHHHTCEEEEESSC-CGGGGGGGTTCCCSEEEECH
T ss_pred ccccC-HHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHHCCCCEEEECc
Confidence 22111 12233333322 2333 344554 55667788999999999853
No 427
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=21.74 E-value=72 Score=33.69 Aligned_cols=42 Identities=29% Similarity=0.452 Sum_probs=32.0
Q ss_pred HHHHHHHHHhCCCceEE-EEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 148 VDFVRRIREMYPKHVII-AGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 148 ~~~ik~lr~~~P~~~li-~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
.+.++++++..|...++ .|.|.+.+++.+.+++|||+|-+..
T Consensus 265 ~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgr 307 (354)
T 4ef8_A 265 LANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGT 307 (354)
T ss_dssp HHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECH
T ss_pred HHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhH
Confidence 56677777666555554 5577899999999999999997744
No 428
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=21.13 E-value=48 Score=34.04 Aligned_cols=66 Identities=23% Similarity=0.279 Sum_probs=38.1
Q ss_pred HHHHHHHHHCCCcEEEECcCCCce--EEEEecccCCcchhhhhc----c-ccCC---ccccccHH---HHHHHHHcCCCE
Q psy3862 171 GEMVEELILSGADVIKVGIGPGSV--CTTRLKNKTSDFFLIQFY----S-CIPQ---AGNVVTGE---MVEELILSGADV 237 (671)
Q Consensus 171 ~e~a~~Li~AGaD~IvVdga~G~~--~~t~v~~~~~~~~~i~~i----~-~~p~---aGnV~t~~---~a~~li~aGAdg 237 (671)
++.++.+++.|+|.|++-|.-|-. .+.+= ...+++.+ . .+|+ .|...|.+ .++++-++|||+
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eE-----r~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gada 110 (301)
T 1xky_A 36 TKLVNYLIDNGTTAIVVGGTTGESPTLTSEE-----KVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDA 110 (301)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHH-----HHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHH-----HHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCE
Confidence 356777889999999998755532 11110 01122222 1 2452 44444444 456677899999
Q ss_pred EEEc
Q psy3862 238 IKVG 241 (671)
Q Consensus 238 vkVG 241 (671)
+-+-
T Consensus 111 vlv~ 114 (301)
T 1xky_A 111 VMLV 114 (301)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9776
No 429
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=20.84 E-value=5.3e+02 Score=26.77 Aligned_cols=37 Identities=16% Similarity=-0.050 Sum_probs=26.9
Q ss_pred HHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHH
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLEC 267 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~ 267 (671)
+-+..+++.|+||+-+. +||-|-.-.-.-.-..+++.
T Consensus 51 ~lv~~li~~Gv~Gl~v~------GtTGE~~~Ls~eEr~~vi~~ 87 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYC------GSMGDWPLLTDEQRMEGVER 87 (344)
T ss_dssp HHHHHHHHTTCCCEEES------SGGGTGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeC------ccCcChhhCCHHHHHHHHHH
Confidence 33445677999999886 67777777766667777777
No 430
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=20.81 E-value=3.6e+02 Score=27.57 Aligned_cols=122 Identities=14% Similarity=0.064 Sum_probs=60.5
Q ss_pred HHHHHHHHcCCCEEEEcccCCCccccceecccCcchhhhHHHHH-HHhhhcCCcchhhhh---hcccee-eccccCCCce
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECA-DAAHGLGGHIISFLT---AMAQKI-INDIKLDFKD 299 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~~Tr~V~gv~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~i-~~~~~l~fdD 299 (671)
+-+..+++.|+||+-+. +||-|-...-.-.-..+++.+ +++.+ .++||+=.. .-+.+. ..-..++.|-
T Consensus 37 ~lv~~li~~Gv~Gl~v~------GtTGE~~~Ls~eEr~~v~~~~v~~~~g-rvpViaGvg~~t~~ai~la~~A~~~Gada 109 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPC------GNTSEFYALSLEEAKEEVRRTVEYVHG-RALVVAGIGYATSTAIELGNAAKAAGADA 109 (316)
T ss_dssp HHHHHHHTTTCCEECTT------SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEECSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCEEEeC------ccccCcccCCHHHHHHHHHHHHHHhCC-CCcEEEEeCcCHHHHHHHHHHHHhcCCCE
Confidence 34445667999999776 566665555555555555543 33322 355554211 111111 1223457788
Q ss_pred eeeecCCCccCCCCcccceeeeeeccCCceeeCcceEecCCCCCCCHHHHHHHHHcCCe
Q psy3862 300 VMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLF 358 (671)
Q Consensus 300 Vll~P~rst~~sr~eVdl~~~l~~~~s~~~~~~iPiIaa~MDtV~~~~mA~~la~~Ggl 358 (671)
++++|-+-.. +++=.+-..|.- - .-..++|||-=|.-.-.++++-..|+++.-+
T Consensus 110 vlv~~P~y~~--~s~~~l~~~f~~--v-a~a~~lPiilYn~g~~l~~~~~~~La~~pnI 163 (316)
T 3e96_A 110 VMIHMPIHPY--VTAGGVYAYFRD--I-IEALDFPSLVYFKDPEISDRVLVDLAPLQNL 163 (316)
T ss_dssp EEECCCCCSC--CCHHHHHHHHHH--H-HHHHTSCEEEEECCTTSCTHHHHHHTTCTTE
T ss_pred EEEcCCCCCC--CCHHHHHHHHHH--H-HHhCCCCEEEEeCCCCCCHHHHHHHHcCCCE
Confidence 8888555322 233334333320 0 0113588887654223344555555555444
No 431
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=20.76 E-value=74 Score=33.18 Aligned_cols=42 Identities=29% Similarity=0.452 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCCceEE-EEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 148 VDFVRRIREMYPKHVII-AGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 148 ~~~ik~lr~~~P~~~li-~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
.+.++++++..+...++ +|.|.+.++|.+.+.||||+|-+.+
T Consensus 265 ~~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~T 307 (354)
T 3tjx_A 265 LANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGT 307 (354)
T ss_dssp HHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECH
T ss_pred HHHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEECh
Confidence 34556666656655554 4567899999999999999998765
No 432
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=20.49 E-value=2.9e+02 Score=28.49 Aligned_cols=13 Identities=15% Similarity=0.306 Sum_probs=11.0
Q ss_pred eeCcceEecCCCC
Q psy3862 330 YQGVPIIAANMDT 342 (671)
Q Consensus 330 ~~~iPiIaa~MDt 342 (671)
.+|+|+++..||.
T Consensus 110 e~GLpv~Tev~D~ 122 (298)
T 3fs2_A 110 EYGFPVLTDIHTE 122 (298)
T ss_dssp HHCCCEEEECCSH
T ss_pred hcCCeEEEEeCCH
Confidence 5799999988884
No 433
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=20.46 E-value=1.6e+02 Score=31.35 Aligned_cols=23 Identities=35% Similarity=0.528 Sum_probs=17.4
Q ss_pred HHHHHHHHcCCCEEEEcccCCCcc
Q psy3862 225 EMVEELILSGADVIKVGIGPGSVC 248 (671)
Q Consensus 225 ~~a~~li~aGAdgvkVG~~~~~~~ 248 (671)
+.+..+.+.++|.| ||+|.||+.
T Consensus 92 ~~~~~~~~~~~D~I-IavGGGsvi 114 (407)
T 1vlj_A 92 EAVEVAKKEKVEAV-LGVGGGSVV 114 (407)
T ss_dssp HHHHHHHHTTCSEE-EEEESHHHH
T ss_pred HHHHHHHhcCCCEE-EEeCChhHH
Confidence 45566678899877 899998854
No 434
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=20.30 E-value=1.6e+02 Score=25.41 Aligned_cols=66 Identities=6% Similarity=-0.041 Sum_probs=36.6
Q ss_pred EeccHHHHH-HHHHCCCcEEEECcCCCc-e---EEEEecccCCcchhhhhccccCCccccccHHHHHHHHHcCCCEEE
Q psy3862 167 NVVTGEMVE-ELILSGADVIKVGIGPGS-V---CTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIK 239 (671)
Q Consensus 167 ~v~t~e~a~-~Li~AGaD~IvVdga~G~-~---~~t~v~~~~~~~~~i~~i~~~p~aGnV~t~~~a~~li~aGAdgvk 239 (671)
...+.+.+. .+.+...|+|++|..-.. . ....+++..+..+++ +-.+-.+.+....++.+||+++-
T Consensus 36 ~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii-------~ls~~~~~~~~~~~~~~g~~~~l 106 (153)
T 3cz5_A 36 EAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARIL-------IFTMHQGSAFALKAFEAGASGYV 106 (153)
T ss_dssp EESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEE-------EEESCCSHHHHHHHHHTTCSEEE
T ss_pred EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEE-------EEECCCCHHHHHHHHHCCCcEEE
Confidence 344544444 444556899999873221 1 122232222222111 34455667888899999999873
No 435
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=20.26 E-value=1.9e+02 Score=30.96 Aligned_cols=59 Identities=24% Similarity=0.324 Sum_probs=42.4
Q ss_pred CceEEEeeccC---CCChHHHHHHHHH-HH-hCCCceEEEEEeccHHHHHHHHHCCCcEEEECc
Q psy3862 131 EIEYICLDVAN---GYTQTFVDFVRRI-RE-MYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189 (671)
Q Consensus 131 ~~d~Ivld~a~---G~~~~~~~~ik~l-r~-~~P~~~li~g~v~t~e~a~~Li~AGaD~IvVdg 189 (671)
+.+.|-+|... |.+..+++.+++. .+ .+|...+++.+..+++.++.+.+.|||++-+.+
T Consensus 236 ~~d~IrlDs~~~~~gd~~~~v~~v~~~ld~~G~~~~~I~aSggl~~~~i~~l~~~GvD~~gvGt 299 (398)
T 2i1o_A 236 KVDYIRLDTPSSRRGNFEALIREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAEAFGVGT 299 (398)
T ss_dssp CCCEEEECCCGGGCSCHHHHHHHHHHHHHHTTCTTSEEEEESSCCHHHHHHHHHTTCCEEEECH
T ss_pred CCcEEEeCCCCCCcccHHHHHHHHHHHHHhCCCCceEEEEeCCCCHHHHHHHHHcCCCEEEeCc
Confidence 56788888532 4555555555443 23 367777888888899999999999999997744
Done!