RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3862
(671 letters)
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate
dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId:
5724]}
Length = 362
Score = 203 bits (517), Expect = 5e-60
Identities = 71/348 (20%), Positives = 115/348 (33%), Gaps = 72/348 (20%)
Query: 288 KIINDIKLDFKDVMLRPKRSTLKS-RSEVDITRTFT---FRNSGKTYQGVPIIAANMDTV 343
K N+ F + +L P ST+ S V+++ + +P+++A M +V
Sbjct: 2 KYYNEPCHTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSV 61
Query: 344 GTFEMAKHLAKHGLFTTIHKYYTLEEW---------------------------KAFAVQ 376
+MA LA+ G + I ++E A
Sbjct: 62 SGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKNFRYLVGAGINTRDFRERVPALVEA 121
Query: 377 NPDVIK--------------------------HVADGGCTSPGDVAKAMGAGADFVMLGG 410
DV+ V G AGADF+ +G
Sbjct: 122 GADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGI 181
Query: 411 MFAGHDQSGGELTNIEYMFFPLVGD-----------MNSYLGGVVDGGCTSPGDVAKAMG 459
E I V D Y+ DGG + A+
Sbjct: 182 GGGSI-CITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALA 240
Query: 460 AGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKH---AGGVAEYRAAEG 516
GADF+MLG FA ++S + +G +K ++G S+ A + GG + EG
Sbjct: 241 MGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSFEEG 300
Query: 517 KTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTA 564
VPY G + D V+ L ++S GA + +L +A ++
Sbjct: 301 VDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQSKAKITLVSS 348
Score = 141 bits (355), Expect = 2e-37
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 8/197 (4%)
Query: 12 KIINDIKLDFKDVMLRPKRSTLKS-RSEVDITRTFT---FRNSGKTYQGVPIIAANMDTV 67
K N+ F + +L P ST+ S V+++ + +P+++A M +V
Sbjct: 2 KYYNEPCHTFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSV 61
Query: 68 GTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILA 127
+MA LA+ G + I ++E A + V + A
Sbjct: 62 SGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKNFRYLVGAGINTRDFRERVPALVEA 121
Query: 128 ALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHV-IIAGNVVTGEMVEELILSGADVIK 186
+ +C+D ++G+++ + IRE Y V + AGN+V GE L +GAD IK
Sbjct: 122 ---GADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIK 178
Query: 187 VGIGPGSVCTTRLKNKT 203
+GIG GS+C TR +
Sbjct: 179 IGIGGGSICITREQKGI 195
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate
dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId:
1314]}
Length = 365
Score = 201 bits (513), Expect = 2e-59
Identities = 87/344 (25%), Positives = 129/344 (37%), Gaps = 73/344 (21%)
Query: 288 KIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFE 347
K + F DV+L P S + EVD+ +PII A MDTV +
Sbjct: 6 KFLKK-GYTFDDVLLIPAESHVLPN-EVDLKTKLA----DNLTLNIPIITAAMDTVTGSK 59
Query: 348 MAKHLAKHGLFTTIHKYYTLEE--WKAFAVQNPDVIKHVADGGCTSPGDVAKAM---GAG 402
MA +A+ G IHK ++ E + V+ + VA + +A AG
Sbjct: 60 MAIAIARAGGLGVIHKNMSITEQAEEVRKVKRSEGRLLVAAAVGVTSDTFERAEALFEAG 119
Query: 403 ADFV---------------------------MLGGMFAGHDQ------------------ 417
AD + ++ G A +
Sbjct: 120 ADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGP 179
Query: 418 ----SGGELTNIEYMFFPLVGDMNSYLGG-----VVDGGCTSPGDVAKAMGAGADFVMLG 468
+ + + + D + + DGG GD+ KA+ AG + VMLG
Sbjct: 180 GSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLG 239
Query: 469 GMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAG--------GVAEYRAAEGKTVQ 520
MFAG D++ GE G+K K + GM S AM K + A EG +
Sbjct: 240 SMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVPEGIEGR 299
Query: 521 VPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTA 564
V Y+G +D V +LGG+RS YVGA ++EL A F+ +
Sbjct: 300 VAYKGAASDIVFQMLGGIRSGMGYVGAGDIQELHENAQFVEMSG 343
Score = 147 bits (372), Expect = 1e-39
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 10/189 (5%)
Query: 12 KIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFE 71
K + F DV+L P S + EVD+ +PII A MDTV +
Sbjct: 6 KFLKK-GYTFDDVLLIPAESHVLPN-EVDLKTKLA----DNLTLNIPIITAAMDTVTGSK 59
Query: 72 MAKHLAKHGLFTTIHKYYTLEE--WKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAAL 129
MA +A+ G IHK ++ E + V+ + VA + G+++ + + A
Sbjct: 60 MAIAIARAGGLGVIHKNMSITEQAEEVRKVKRSEGRLLVAAAVGVTSDTFERAEALFEA- 118
Query: 130 PEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGI 189
+ I +D A+G++ + + IR +P +IAGN+ T E L +G DV+KVGI
Sbjct: 119 -GADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGI 177
Query: 190 GPGSVCTTR 198
GPGS+CTTR
Sbjct: 178 GPGSICTTR 186
>d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate
dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId:
53953]}
Length = 368
Score = 194 bits (495), Expect = 8e-57
Identities = 84/351 (23%), Positives = 140/351 (39%), Gaps = 78/351 (22%)
Query: 287 QKIINDIK-LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGT 345
+K+ IK F DV+L P+ + ++ + +VD++ T +PI++A MDTV
Sbjct: 4 EKLEKAIKGYTFDDVLLIPQATEVEPK-DVDVSTRIT----PNVKLNIPILSAAMDTVTE 58
Query: 346 FEMAKHLAKHGLFTTIHKYYTLEE----------WKAFAVQNPDVIKHVADGGCTSPGDV 395
+EMA +A+ G IH+ +EE + + D + SP D+
Sbjct: 59 WEMAVAMAREGGLGVIHRNMGIEEQVEQVKRVKRAEKYKNAVRDENGELLVAAAVSPFDI 118
Query: 396 AKA---MGAGADFVMLGG------------------------------------------ 410
+A AG D +++
Sbjct: 119 KRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKVDADFIVGNIANPKAVDDLTFADA 178
Query: 411 ----MFAGHDQSGGELTNIEYMFFPLVGDMNSYLGG-----VVDGGCTSPGDVAKAMGAG 461
+ G + + + V + + DGG GD+ KA+ AG
Sbjct: 179 VKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAG 238
Query: 462 ADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSST------TAMDKHAGGVAEYR--A 513
AD VMLG + AG ++ G+ + +G+K K + GM S A + GG + R
Sbjct: 239 ADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFV 298
Query: 514 AEGKTVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTA 564
EG VPYRG V++ + ++GGL++ YVGA ++EL + F+ T
Sbjct: 299 PEGVEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKGEFVIITH 349
Score = 128 bits (322), Expect = 7e-33
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 11 QKIINDIK-LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGT 69
+K+ IK F DV+L P+ + ++ + +VD++ T +PI++A MDTV
Sbjct: 4 EKLEKAIKGYTFDDVLLIPQATEVEPK-DVDVSTRIT----PNVKLNIPILSAAMDTVTE 58
Query: 70 FEMAKHLAKHGLFTTIHKYYTLEE----------WKAFAVQNPDVIKHVAVSSGISAKDL 119
+EMA +A+ G IH+ +EE + + D + V++ +S D+
Sbjct: 59 WEMAVAMAREGGLGVIHRNMGIEEQVEQVKRVKRAEKYKNAVRDENGELLVAAAVSPFDI 118
Query: 120 AGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELIL 179
E+ A ++ I +D A+ + + ++ +R+ I GN+ + V++L
Sbjct: 119 KRAIELDKA--GVDVIVVDTAHAHNLKAIKSMKEMRQKVD-ADFIVGNIANPKAVDDLT- 174
Query: 180 SGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSC 214
AD +KVGIGPGS+CTTR+ +
Sbjct: 175 -FADAVKVGIGPGSICTTRIVAGVGVPQITAVAMV 208
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate
dehydrogenase (IMPDH) {Thermotoga maritima [TaxId:
2336]}
Length = 330
Score = 182 bits (463), Expect = 1e-52
Identities = 86/333 (25%), Positives = 129/333 (38%), Gaps = 69/333 (20%)
Query: 294 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLA 353
L F DV+L P+ S + + +V I T + +P+++A MDTV +AK LA
Sbjct: 4 ALTFDDVLLVPQYSEVLPK-DVKIDTRLTR----QIRINIPLVSAAMDTVTEAALAKALA 58
Query: 354 KHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGD---VAKAMGAGADFV---- 406
+ G IHK T +E V TSP V K + AG D +
Sbjct: 59 REGGIGIIHKNLTPDEQARQVSIVKKTRLLVGAAVGTSPETMERVEKLVKAGVDVIVIDT 118
Query: 407 ---------------------------------------------MLGGMFAGHDQSGGE 421
+ G+ G +
Sbjct: 119 AHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRV 178
Query: 422 LTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVA------KAMGAGADFVMLGGMFAGHD 475
+ + V + + D + G + KA+ AGA+ VM+G +FAG +
Sbjct: 179 VAGVGVPQLTAVMECSEVARK-YDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGTE 237
Query: 476 QSGGELIEKDGKKVKLFYGMSSTTAM-----DKHAGGVAEYRAAEGKTVQVPYRGDVNDT 530
++ GE I G+K K + GM S AM D++ EG VPY+G V D
Sbjct: 238 EAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGIEGMVPYKGTVKDV 297
Query: 531 VQDILGGLRSACTYVGASKLKELPRRATFIRCT 563
V ++GGLRS Y+GA +KEL +A F++ T
Sbjct: 298 VHQLVGGLRSGMGYIGARTIKELQEKAVFVKIT 330
Score = 151 bits (382), Expect = 2e-41
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 7/181 (3%)
Query: 18 KLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFEMAKHLA 77
L F DV+L P+ S + + +V I T + +P+++A MDTV +AK LA
Sbjct: 4 ALTFDDVLLVPQYSEVLPK-DVKIDTRLTR----QIRINIPLVSAAMDTVTEAALAKALA 58
Query: 78 KHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPEIEYICL 137
+ G IHK T +E V + G S + + +++++ A ++ I +
Sbjct: 59 REGGIGIIHKNLTPDEQARQVSIVKKTRLLVGAAVGTSPETMERVEKLVKA--GVDVIVI 116
Query: 138 DVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTT 197
D A+G+++ ++ + I+ YP ++AGNV T E E LI +GAD +KVG+GPGS+CTT
Sbjct: 117 DTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTT 176
Query: 198 R 198
R
Sbjct: 177 R 177
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate
dehydrogenase (IMPDH) {Chinese hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 378
Score = 157 bits (399), Expect = 3e-43
Identities = 63/391 (16%), Positives = 113/391 (28%), Gaps = 48/391 (12%)
Query: 286 AQKIINDIK-LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG 344
AQ++ N L + D ++ P + +VD+T T + + K P++++ MDTV
Sbjct: 4 AQQLFNCGDGLTYNDFLILPGYIDFTAD-QVDLTSALTKKITLK----TPLVSSPMDTVT 58
Query: 345 TFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGD--VAKAMGAG 402
MA +A G IH T E V+ + + A+G
Sbjct: 59 EAGMAIAMALTGGIGFIHHNCTPEFQANE-VRKVKKYEQYPLASKDAKKQLLCGAAIGTH 117
Query: 403 AD----FVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKA- 457
D +L N + + Y V GG AK
Sbjct: 118 EDDKYRLDLLALAGVDVVVLDSSQGNSIFQINMIKYMKEKYPNLQVIGGNVVTAAQAKNL 177
Query: 458 MGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGK 517
+ AG D + +G T G +
Sbjct: 178 IDAGVDALRVGMGCGSIC----------------------ITQEVLACGRPQATAVYKVS 215
Query: 518 TVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDIL 577
+ V G + +GAS + + + T + I
Sbjct: 216 EYARRFGVPVIADGGIQNVGHIAKALALGASTVMM----GSLLAATTEAPGEYFFSDGIR 271
Query: 578 GGLRSACTYVGASKLKELPRRATFIRCTAQLNNVAAEGKTVQVPYRGDVNDTVQDILGGL 637
+ A + F A+G + V +G ++ V ++ G+
Sbjct: 272 LKKYRGMGSLDAMDKHLSSQNRYFSEADKIK---VAQGVSGAVQDKGSIHKFVPYLIAGI 328
Query: 638 RSACTYVGASKLKELPR-----RATFIRCTA 663
+ +C +GA L ++ F + T+
Sbjct: 329 QHSCQDIGAKSLTQVRAMMYSGELKFEKRTS 359
Score = 152 bits (385), Expect = 2e-41
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 10 AQKIINDIK-LDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG 68
AQ++ N L + D ++ P + +VD+T T + + K P++++ MDTV
Sbjct: 4 AQQLFNCGDGLTYNDFLILPGYIDFTAD-QVDLTSALTKKITLK----TPLVSSPMDTVT 58
Query: 69 TFEMAKHLAKHGLFTTIHKYYTLEEWKA----------FAVQNPDVIKHVAVSSGISAKD 118
MA +A G IH T E + + + D K + + I +
Sbjct: 59 EAGMAIAMALTGGIGFIHHNCTPEFQANEVRKVKKYEQYPLASKDAKKQLLCGAAIGTHE 118
Query: 119 LAGLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELI 178
+ L AL ++ + LD + G + ++ ++ ++E YP +I GNVVT + LI
Sbjct: 119 DDKYRLDLLALAGVDVVVLDSSQGNSIFQINMIKYMKEKYPNLQVIGGNVVTAAQAKNLI 178
Query: 179 LSGADVIKVGIGPGSVCTTRLKNK--TSDFFLIQFYSCIPQAGNV 221
+G D ++VG+G GS+C T+ + S + V
Sbjct: 179 DAGVDALRVGMGCGSICITQEVLACGRPQATAVYKVSEYARRFGV 223
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH)
{Lyme disease spirochete (Borrelia burgdorferi) [TaxId:
139]}
Length = 388
Score = 157 bits (398), Expect = 6e-43
Identities = 72/406 (17%), Positives = 128/406 (31%), Gaps = 50/406 (12%)
Query: 288 KIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFE 347
KI + L F DV L P++S++ EV + T +P +++ MDTV +
Sbjct: 2 KITKE-ALTFDDVSLIPRKSSVLPS-EVSLKTQLTK----NISLNIPFLSSAMDTVTESQ 55
Query: 348 MAKHLAKHGLFTTIHKYYTLEEWKAF--AVQNPDVIKHVADGGCTSPGDVAKAMGAGADF 405
MA +AK G IHK ++E + V+ K + G T+ + A
Sbjct: 56 MAIAIAKEGGIGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNE-QKPEIFTAKQHL 114
Query: 406 VMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADF- 464
+ F D+N+ L A
Sbjct: 115 EKSDAYKNAEHKE---------DFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVD 165
Query: 465 VMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKTVQVPYR 524
+++ GH ELI+K K ++ + A + A K P
Sbjct: 166 ILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGS 225
Query: 525 GDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVND------------T 572
V + +A V + I + D
Sbjct: 226 ICTTRIVAGVGVPQITAICDV----YEACNNTNICIIADGGIRFSGDVVKAIAAGADSVM 281
Query: 573 VQDILGGLRSACTYV------------GASKLKELPRRAT---FIRCTAQLNNVAAEGKT 617
+ ++ G + + + G + + R + F + + EG
Sbjct: 282 IGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGSKSRYFQLENNEPKKLVPEGIE 341
Query: 618 VQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTA 663
VPY G + D + + GGL S Y+GA+ + +L + F++ +
Sbjct: 342 GMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKFVKISH 387
Score = 132 bits (333), Expect = 3e-34
Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 11/269 (4%)
Query: 12 KIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVGTFE 71
KI + L F DV L P++S++ EV + T +P +++ MDTV +
Sbjct: 2 KITKE-ALTFDDVSLIPRKSSVLPS-EVSLKTQLTK----NISLNIPFLSSAMDTVTESQ 55
Query: 72 MAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAALPE 131
MA +AK G IHK ++E + V + + + D ++
Sbjct: 56 MAIAIAKEGGIGIIHKNMSIEAQ---RKEIEKVKTYKFQKTINTNGDTN--EQKPEIFTA 110
Query: 132 IEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGP 191
+++ A + DF +++ K + A + + +E + + + +
Sbjct: 111 KQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVID 170
Query: 192 GSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTR 251
+ + + ++ + AGN+VT E +LI GAD +KVGIGPGS+CTTR
Sbjct: 171 SAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTR 230
Query: 252 LKTGVGYPQFSAVLECADAAHGLGGHIIS 280
+ GVG PQ +A+ + +A + II+
Sbjct: 231 IVAGVGVPQITAICDVYEACNNTNICIIA 259
>d1p0ka_ c.1.4.1 (A:) Isopentenyl-diphosphate delta-isomerase
{Bacillus subtilis [TaxId: 1423]}
Length = 329
Score = 62.9 bits (152), Expect = 3e-11
Identities = 32/249 (12%), Positives = 75/249 (30%), Gaps = 35/249 (14%)
Query: 21 FKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTV-------GTFEMA 73
D+ + +VDI+ + PI M +A
Sbjct: 5 LDDITFVHVSLPDLALEQVDISTKIG----ELSSS-SPIFINAMTGGGGKLTYEINKSLA 59
Query: 74 KHLAKHGLFTTIHKYYTLEEWKAFA-------VQNPDVIKHV------AVSSGISAKDLA 120
+ ++ G+ + + + + +NP+ + + A ++
Sbjct: 60 RAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGSEATAAQAKEAVEMI 119
Query: 121 GLKEILAALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVII--AGNVVTGEMVEELI 178
G + L I+ I + + + + +I VI+ G ++ +L
Sbjct: 120 GANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLY 179
Query: 179 LSGADVIKVGIGPG----SVCTTRLKNKTSDFFL--IQFYSCIPQAGNVVTGEMV--EEL 230
+GA + +G G + R + + S F I + + + + +
Sbjct: 180 EAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGG 239
Query: 231 ILSGADVIK 239
+ DV K
Sbjct: 240 LQDALDVAK 248
Score = 57.5 bits (138), Expect = 2e-09
Identities = 42/325 (12%), Positives = 91/325 (28%), Gaps = 38/325 (11%)
Query: 297 FKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTV-------GTFEMA 349
D+ + +VDI+ + PI M +A
Sbjct: 5 LDDITFVHVSLPDLALEQVDISTKIG----ELSSS-SPIFINAMTGGGGKLTYEINKSLA 59
Query: 350 KHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLG 409
+ ++ G+ + + + + + V K +G + + V +
Sbjct: 60 RAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGSEATAAQAKEAVEMI 119
Query: 410 GMFA--GHDQSGGELTNIEYMFFP---------LVGDMNSYLGGVVDGGCTSPGDVAKAM 458
G A H E+ E + ++ + G S K
Sbjct: 120 GANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLY 179
Query: 459 GAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGKT 518
AGA V +GG + L + +G+S+ ++ +
Sbjct: 180 EAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF--------PA 231
Query: 519 VQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDILG 578
+ G + D+ + + G + + + + +Q IL
Sbjct: 232 STMIASGGLQ-DALDVAKAIALGASCTGMA------GHFLKALTDSGEEGLLEEIQLILE 284
Query: 579 GLRSACTYVGASKLKELPRRATFIR 603
L+ T +GA + +L + I+
Sbjct: 285 ELKLIMTVLGARTIADLQKAPLVIK 309
>d1vcfa1 c.1.4.1 (A:23-332) Isopentenyl-diphosphate delta-isomerase
{Thermus thermophilus [TaxId: 274]}
Length = 310
Score = 56.8 bits (136), Expect = 3e-09
Identities = 45/325 (13%), Positives = 78/325 (24%), Gaps = 39/325 (12%)
Query: 297 FKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG--TFEMAKHLAK 354
+ LR + + SEVD+T F GKT + P + M + LA+
Sbjct: 6 LEGFRLRYQALAGLALSEVDLTTPFL----GKTLK-APFLIGAMTGGEENGERINLALAE 60
Query: 355 ----------HGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVA-------K 397
G + + P + G +
Sbjct: 61 AAEALGVGMMLGSGRILLERPEALRSFRVRKVAPKALLIANLGLAQLRRYGRDDLLRLVE 120
Query: 398 AMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKA 457
+ A A + + + + + L+ + V G +
Sbjct: 121 MLEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLPLPFPVMVKEVGHGLS-REAALAL 179
Query: 458 MGAGADFVMLGGMFAGHDQSGGELIEKDGKKVKLFYGMSSTTAMDKHAGGVAEYRAAEGK 517
V + G E + + + TA
Sbjct: 180 RDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREV------LP 233
Query: 518 TVQVPYRGDVNDTVQDILGGLRSACTYVGASKLKELPRRATFIRCTAQLNNVNDTVQDIL 577
+ + G V T D L + + R V + D L
Sbjct: 234 HLPLVASGGVY-TGTDGAKALALGADLLAVA-------RPLLRPALEGAERVAAWIGDYL 285
Query: 578 GGLRSACTYVGASKLKELPRRATFI 602
LR+A +GA KE R +
Sbjct: 286 EELRTALFAIGARNPKEARGRVERV 310
Score = 44.9 bits (105), Expect = 2e-05
Identities = 42/265 (15%), Positives = 76/265 (28%), Gaps = 51/265 (19%)
Query: 21 FKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDTVG--TFEMAKHLAK 78
+ LR + + SEVD+T F GKT + P + M + LA+
Sbjct: 6 LEGFRLRYQALAGLALSEVDLTTPFL----GKTLK-APFLIGAMTGGEENGERINLALAE 60
Query: 79 ----------HGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGLKEILAA 128
G + + P + + + G ++L
Sbjct: 61 AAEALGVGMMLGSGRILLERPEALRSFRVRKVAPKALLIANLGLAQLRRY--GRDDLLRL 118
Query: 129 LPEIEYICLDVANGYTQ--------TFVDFVRRIREMY----PKHVIIAGNVVTGEMVEE 176
+ +E L Q F V R+ E+ P V G+ ++ E
Sbjct: 119 VEMLEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLPLPFPVMVKEVGHGLSREAALA 178
Query: 177 LILSGADVI-------------KVGIGPGSVCTTRLKN-------KTSDFFLIQFYSCIP 216
L + + + G V L + + + +
Sbjct: 179 LRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLV 238
Query: 217 QAGNVVTGEMVEELILSGADVIKVG 241
+G V TG + + GAD++ V
Sbjct: 239 ASGGVYTGTDGAKALALGADLLAVA 263
Score = 35.2 bits (80), Expect = 0.022
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 626 VNDTVQDILGGLRSACTYVGASKLKELPRRATFI 659
V + D L LR+A +GA KE R +
Sbjct: 277 VAAWIGDYLEELRTALFAIGARNPKEARGRVERV 310
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate
2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]}
Length = 230
Score = 47.9 bits (113), Expect = 1e-06
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Query: 332 GVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKH------VA 385
++ A++ T +A + TT+ Y +A +A
Sbjct: 129 PNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKAGIAVIA 188
Query: 386 DGGCTSPGDVAKAMGAGADFVMLGG 410
+G SP + K G +++GG
Sbjct: 189 EGKIHSPEEAKKINDLGVAGIVVGG 213
Score = 42.9 bits (100), Expect = 5e-05
Identities = 15/112 (13%), Positives = 32/112 (28%), Gaps = 4/112 (3%)
Query: 358 FTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQ 417
T ++ L+ + ++ + A AG DFV
Sbjct: 106 CTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVAHQAGIDFVGTTL----SGY 161
Query: 418 SGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGG 469
+ + + + + +G SP + K G +++GG
Sbjct: 162 TPYSRQEAGPDVALIEALCKAGIAVIAEGKIHSPEEAKKINDLGVAGIVVGG 213
Score = 38.3 bits (88), Expect = 0.001
Identities = 28/201 (13%), Positives = 65/201 (32%), Gaps = 15/201 (7%)
Query: 50 SGKTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAF--AVQNPDVIKH 107
S + G P+ + + MAK + G + ++ + K P +I
Sbjct: 18 SCQALPGEPLYSETGGIMP--LMAKAAQEAG--AVGIRANSVRDIKEIQAITDLP-IIGI 72
Query: 108 VAVSSGISAKDLAGLKEILAALPEIEY--ICLDVANGYT---QTFVDFVRRIREMYPKHV 162
+ + + L + I +D F+R+++E YP +
Sbjct: 73 IKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYP-NQ 131
Query: 163 IIAGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQ--AGN 220
++ ++ T + +G D + + + + + + I G
Sbjct: 132 LLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKAGIAVIAEGK 191
Query: 221 VVTGEMVEELILSGADVIKVG 241
+ + E +++ G I VG
Sbjct: 192 IHSPEEAKKINDLGVAGIVVG 212
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate
2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]}
Length = 222
Score = 44.5 bits (104), Expect = 1e-05
Identities = 15/113 (13%), Positives = 32/113 (28%), Gaps = 1/113 (0%)
Query: 357 LFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHD 416
L T+ + + + + + A G D++
Sbjct: 94 LDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSY 153
Query: 417 QSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGG 469
G L ++ F V + + +G +P + M G ++GG
Sbjct: 154 TQGQLLYQNDFQFLKDVL-QSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGG 205
Score = 41.8 bits (97), Expect = 9e-05
Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 334 PIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKH---------V 384
I A++ TV + A L + TT+H Y + + + + +K +
Sbjct: 120 VEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVI 179
Query: 385 ADGGCTSPGDVAKAMGAGADFVMLGG 410
A+G +P + M G ++GG
Sbjct: 180 AEGNVITPDMYKRVMDLGVHCSVVGG 205
Score = 41.0 bits (95), Expect = 2e-04
Identities = 34/194 (17%), Positives = 65/194 (33%), Gaps = 12/194 (6%)
Query: 58 PIIAANMDTVGTF-EMAKHLAKHG-LFTTIHKYYTLEEWK-AFAVQNPDVIKHVAVSSGI 114
+ + + +MA + G + + + K + ++K S +
Sbjct: 13 ALPDEPLHSSFIMSKMALAAYEGGAVGIRANTKEDILAIKETVDLPVIGIVKRDYDHSDV 72
Query: 115 SAKDLAGLKEILAALPEIEYICLDVANG--YTQTFVDFVRRIREMYPKHVIIAGNVVTGE 172
+ + L + E I LD +T + V IR P +V I ++ T E
Sbjct: 73 FITATSKEVDELIES-QCEVIALDATLQQRPKETLDELVSYIRTHAP-NVEIMADIATVE 130
Query: 173 MVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQ---FYSCIPQ--AGNVVTGEMV 227
+ G D I + + T +DF ++ GNV+T +M
Sbjct: 131 EAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMY 190
Query: 228 EELILSGADVIKVG 241
+ ++ G VG
Sbjct: 191 KRVMDLGVHCSVVG 204
>d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 414
Score = 43.4 bits (101), Expect = 7e-05
Identities = 27/104 (25%), Positives = 33/104 (31%), Gaps = 2/104 (1%)
Query: 370 WKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMF 429
WK + G DV KA G V+L +
Sbjct: 235 WKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAET 294
Query: 430 FPLVGDMN--SYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMF 471
P++ N L VDGG DV KA+ GA V LG F
Sbjct: 295 MPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPF 338
>d1p4ca_ c.1.4.1 (A:) Membrane-associated (S)-mandelate
dehydrogenase {Pseudomonas putida [TaxId: 303]}
Length = 353
Score = 42.3 bits (98), Expect = 1e-04
Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 5/88 (5%)
Query: 384 VADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGV 443
+ G S D + + GAD V+L + G +
Sbjct: 225 LLVKGLLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPV-----L 279
Query: 444 VDGGCTSPGDVAKAMGAGADFVMLGGMF 471
+D G D+ KA+ GA+ V+LG
Sbjct: 280 IDSGFRRGSDIVKALALGAEAVLLGRAT 307
>d1ea0a2 c.1.4.1 (A:423-1193) Alpha subunit of glutamate synthase,
central and FMN domains {Azospirillum brasilense [TaxId:
192]}
Length = 771
Score = 42.6 bits (100), Expect = 1e-04
Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 27/133 (20%)
Query: 362 HKYYTLEEWKAFAVQ----NPDV---IKHVADGGCTSPGDVAKAMG-AGADFVMLGGMFA 413
H Y++E+ NPD +K V+ G G +A + A AD +++ G
Sbjct: 550 HDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGI---GTIAAGVAKANADIILISGNSG 606
Query: 414 GHDQSGGELTNIEYMFFPL---VGDMNSYLGG---------VVDGGCTSPGDVAKAMGAG 461
G T+I++ P + +++ L DGG + D+ A G
Sbjct: 607 GTG--ASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLG 664
Query: 462 ADFVMLG--GMFA 472
A+ +G + A
Sbjct: 665 AEEFGIGTASLIA 677
>d1ofda2 c.1.4.1 (A:431-1239) Alpha subunit of glutamate synthase,
central and FMN domains {Synechocystis sp. [TaxId:
1143]}
Length = 809
Score = 40.3 bits (94), Expect = 8e-04
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 27/133 (20%)
Query: 362 HKYYTLEEWKAFAVQ----NPDV---IKHVADGGCTSPGDVAKAMG-AGADFVMLGGMFA 413
H Y++E+ NP+ +K VA+ G G +A + A AD + + G
Sbjct: 577 HDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGI---GTIAAGVAKANADIIQISGHDG 633
Query: 414 GHDQSGGELTNIEYMFFPL---VGDMNSYLGG---------VVDGGCTSPGDVAKAMGAG 461
G L++I++ P V +++ L DGG + DV A G
Sbjct: 634 GTG--ASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMG 691
Query: 462 ADFVMLG--GMFA 472
A+ G M A
Sbjct: 692 AEEYGFGSIAMIA 704
>d1tb3a1 c.1.4.1 (A:1-349) Hydroxyacid oxidase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 349
Score = 38.4 bits (88), Expect = 0.002
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
Query: 328 KTYQGVPIIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKH---- 383
++ +PII + T E+A G+ + H L+E A +V+
Sbjct: 213 QSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGK 272
Query: 384 ---VADGGCTSPGDVAKAMGAGADFVMLGGMF 412
DGG + DV KA+ GA + LG
Sbjct: 273 IEVYMDGGVRTGTDVLKALALGARCIFLGRPI 304
Score = 36.0 bits (82), Expect = 0.011
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 444 VDGGCTSPGDVAKAMGAGADFVMLGGMF 471
+DGG + DV KA+ GA + LG
Sbjct: 277 MDGGVRTGTDVLKALALGARCIFLGRPI 304
>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal
domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Length = 340
Score = 37.7 bits (86), Expect = 0.004
Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 147 FVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSG-ADVIKVG 188
+ +V+ ++++ K V+ G E + E++ G AD+I
Sbjct: 279 TIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCA 321
>d1goxa_ c.1.4.1 (A:) Glycolate oxidase {Spinach (Spinacia oleracea)
[TaxId: 3562]}
Length = 359
Score = 36.1 bits (82), Expect = 0.013
Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 9/105 (8%)
Query: 370 WKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMF 429
WK A + G + D A+ GA +++ A
Sbjct: 213 WKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYV------PATI 266
Query: 430 FPLVGDMNSYLGGV---VDGGCTSPGDVAKAMGAGADFVMLGGMF 471
L + + G + +DGG DV KA+ GA V +G
Sbjct: 267 MALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPV 311
>d1juba_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus
lactis, isozyme A [TaxId: 1358]}
Length = 311
Score = 35.4 bits (80), Expect = 0.017
Identities = 12/54 (22%), Positives = 22/54 (40%)
Query: 356 GLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLG 409
G+ K L +AF + I+ + GG + D + + GA + +G
Sbjct: 218 GIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIG 271
Score = 30.0 bits (66), Expect = 0.81
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 442 GVVDGGCTSPGDVAKAMGAGADFVMLG 468
+ GG + D + + GA + +G
Sbjct: 245 IIGTGGIETGQDAFEHLLCGATMLQIG 271
Score = 28.8 bits (63), Expect = 2.0
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 160 KHVIIAGNVVTGEMVEELILSGADVIKVGIG 190
+I G + TG+ E +L GA ++++G
Sbjct: 243 IQIIGTGGIETGQDAFEHLLCGATMLQIGTA 273
>d1ep3a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus
lactis, isozyme B [TaxId: 1358]}
Length = 311
Score = 34.6 bits (78), Expect = 0.028
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 381 IKHVADGGCTSPGDVAKAMGAGADFVMLG-GMFAG 414
I + GG + DV + AGA V +G FA
Sbjct: 242 IPIIGMGGVANAQDVLEMYMAGASAVAVGTANFAD 276
Score = 32.7 bits (73), Expect = 0.14
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLG-GMFAG 473
+ GG + DV + AGA V +G FA
Sbjct: 245 IGMGGVANAQDVLEMYMAGASAVAVGTANFAD 276
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain
4 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 312
Score = 33.0 bits (74), Expect = 0.097
Identities = 12/61 (19%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Query: 356 GLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGH 415
G+ T + L A P +A GG S + + +GA + +
Sbjct: 232 GVSGTAIRPIALRAVTTIARALPG-FPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQ 290
Query: 416 D 416
D
Sbjct: 291 D 291
Score = 32.6 bits (73), Expect = 0.14
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 149 DFVRRIREMYPKHVIIA-GNVVTGEMVEELILSGADVIKVGIG 190
V I P I+A G + + E + + SGA V++V
Sbjct: 244 RAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSA 286
Score = 32.3 bits (72), Expect = 0.19
Identities = 6/30 (20%), Positives = 11/30 (36%)
Query: 446 GGCTSPGDVAKAMGAGADFVMLGGMFAGHD 475
GG S + + +GA + + D
Sbjct: 262 GGIDSAESGLQFLHSGASVLQVCSAVQNQD 291
>d2b4ga1 c.1.4.1 (A:2-313) Dihydroorotate dehydrogenase {Trypanosoma
brucei [TaxId: 5691]}
Length = 312
Score = 32.6 bits (73), Expect = 0.13
Identities = 16/68 (23%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Query: 345 TFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAGAD 404
T + GL L AF + PD + GG S + + AGA
Sbjct: 208 TVVIKPKQGFGGLGGKYVLPTALANVNAFFRRCPDKLV-FGCGGVYSGEEAFLHILAGAS 266
Query: 405 FVMLGGMF 412
V +G
Sbjct: 267 MVQVGTAL 274
Score = 29.5 bits (65), Expect = 1.4
Identities = 29/256 (11%), Positives = 63/256 (24%), Gaps = 13/256 (5%)
Query: 223 TGEMVEELILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECADAAHGLGGHIISFL 282
T E + + S + + CT +TG P++ + + + GL + F
Sbjct: 25 TEEDLRRMTESESGSLIGK-----SCTLAPRTGNPEPRYFGLPLGSINSMGLPNLGVDFY 79
Query: 283 TAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVPIIAANMDT 342
+ A + + + M + + T + P +
Sbjct: 80 LSYAAQTHDYSRKPLFLSMSGLSVEESVEMVKKLVPITKEKGTILELNLSCPNVPGKPQV 139
Query: 343 VGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKAMGAG 402
F+ + + + ++ F + + D+ V +
Sbjct: 140 GYDFDTTRTYLQKVSEAYGLPFG-VKMPPYFDIAHFDMAAAVLNDFPLVKFITCVNSIGN 198
Query: 403 ADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYL-------GGVVDGGCTSPGDVA 455
+ G P + GG S +
Sbjct: 199 GLVIDPANETVVIKPKQGFGGLGGKYVLPTALANVNAFFRRCPDKLVFGCGGVYSGEEAF 258
Query: 456 KAMGAGADFVMLGGMF 471
+ AGA V +G
Sbjct: 259 LHILAGASMVQVGTAL 274
>d1znna1 c.1.2.6 (A:18-271) Pyridoxal biosynthesis lyase PdxS
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 254
Score = 32.0 bits (73), Expect = 0.17
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 381 IKHVADGGCTSPGDVAKAMGAGADFVMLG-GMFAGHD 416
+ + A GG T+P D A M GAD V +G G+F +
Sbjct: 190 VVNFAAGGVTTPADAALMMHLGADGVFVGSGIFKSEN 226
Score = 30.9 bits (70), Expect = 0.46
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 443 VVDGGCTSPGDVAKAMGAGADFVMLG-GMFAGHD 475
GG T+P D A M GAD V +G G+F +
Sbjct: 193 FAAGGVTTPADAALMMHLGADGVFVGSGIFKSEN 226
>d1wv2a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 243
Score = 31.4 bits (71), Expect = 0.24
Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 20/97 (20%)
Query: 372 AFAVQNPDVIKHVADGGCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFP 431
+ +P + + +A+ GC + +A +G+G Y
Sbjct: 132 VYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICN------------------PYNLRI 173
Query: 432 LVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLG 468
++ + + +VD G + D A AM G + V++
Sbjct: 174 ILEEAKVPV--LVDAGVGTASDAAIAMELGCEAVLMN 208
>d1q6oa_ c.1.2.3 (A:) 3-keto-L-gulonate 6-phosphate decarboxylase
{Escherichia coli [TaxId: 562]}
Length = 213
Score = 30.2 bits (67), Expect = 0.56
Identities = 10/104 (9%), Positives = 21/104 (20%), Gaps = 2/104 (1%)
Query: 140 ANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGAD--VIKVGIGPGSVCTT 197
T + +E I T E ++ +G V +
Sbjct: 86 CCADINTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVA 145
Query: 198 RLKNKTSDFFLIQFYSCIPQAGNVVTGEMVEELILSGADVIKVG 241
+ + + + E + V G
Sbjct: 146 WGEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPIHVFIAG 189
>d1ka9f_ c.1.2.1 (F:) Cyclase subunit (or domain) of
imidazoleglycerolphosphate synthase HisF {Thermus
thermophilus [TaxId: 274]}
Length = 251
Score = 29.3 bits (65), Expect = 1.2
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Query: 345 TFEMAKHLAKHG----LFTTIHKYYTLEE---WKAFAVQNPDVIKHVADGGCTSPGDVAK 397
E A + G L T++ + T E V + +A GG +
Sbjct: 153 AVEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIASGGAGRMEHFLE 212
Query: 398 AMGAGADFVMLGGMF 412
A AGA+ + +F
Sbjct: 213 AFQAGAEAALAASVF 227
Score = 27.8 bits (61), Expect = 3.5
Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 2/116 (1%)
Query: 74 KHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHV-AVSSGISAKDLAGLKEILAALPEI 132
L + + L + P+V V +G+ A + A +K + EI
Sbjct: 110 PELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWA-VKGVELGAGEI 168
Query: 133 EYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGADVIKVG 188
+D + R + E VI +G E E +GA+
Sbjct: 169 LLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAEAALAA 224
>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus
[TaxId: 2714]}
Length = 105
Score = 28.2 bits (63), Expect = 1.2
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 10/66 (15%)
Query: 122 LKEILAALPEIEYICL-DVANG-Y----TQTFVDFVRRIREMY----PKHVIIAGNVVTG 171
LK I +++ + L D A Y T + + +++A N +
Sbjct: 16 LKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKGVDIIVVACNTASA 75
Query: 172 EMVEEL 177
+E L
Sbjct: 76 YALERL 81
>d1f76a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Escherichia coli
[TaxId: 562]}
Length = 336
Score = 29.6 bits (65), Expect = 1.3
Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 148 VDFVRRIREMYPKHV-IIA-GNVVTGEMVEELILSGADVIKVGIG 190
+ +RR+ + II G + + E I +GA ++++ G
Sbjct: 276 TEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSG 320
Score = 27.3 bits (59), Expect = 7.0
Identities = 20/130 (15%), Positives = 39/130 (30%), Gaps = 4/130 (3%)
Query: 339 NMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVADGGCTSPGDVAKA 398
+ + + H K + +++H DG + + ++
Sbjct: 193 LLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRS 252
Query: 399 MGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAM 458
+ G G +G I + L G + + GV GG S + +
Sbjct: 253 LVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRL--PIIGV--GGIDSVIAAREKI 308
Query: 459 GAGADFVMLG 468
AGA V +
Sbjct: 309 AAGASLVQIY 318
>d1oyaa_ c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast
(Saccharomyces pastorianus) [TaxId: 27292]}
Length = 399
Score = 29.5 bits (65), Expect = 1.4
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 149 DFVRRIREMYPKHVIIAGNVVTG-EMVEELILSGADVIKVG 188
+ ++ VI AGN E+V E + +I G
Sbjct: 307 GSNDFVYSIWKGPVIRAGNFALHPEVVREEVKDKRTLIGYG 347
>d1d3ga_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 367
Score = 29.2 bits (64), Expect = 1.6
Identities = 33/262 (12%), Positives = 72/262 (27%), Gaps = 18/262 (6%)
Query: 165 AGNVVTGEMVEELILSGADVIKVGIGPGSVCTTRLKNKTSDFFLIQFYSCIPQAGNVVTG 224
AG GE V+ L G +++G + + N
Sbjct: 67 AGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLP-EDQAVINRYGFNSHGL 125
Query: 225 EMVEE--------LILSGADVIKVGIGPGSVCTTRLKTGVGYPQFSAVLECAD------A 270
+VE D + +G+ G T+ + AD +
Sbjct: 126 SVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVS 185
Query: 271 AHGLGGHIISFLTAMAQKIINDIKLDFKDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTY 330
+ G A ++++ + + + + + L + ++ S
Sbjct: 186 SPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKE 245
Query: 331 QGVPIIAANMDTVGTFEMAKHLAKHGLFTTIH---KYYTLEEWKAFAVQNPDVIKHVADG 387
G+ + TV + + + + + + + + G
Sbjct: 246 LGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVG 305
Query: 388 GCTSPGDVAKAMGAGADFVMLG 409
G +S D + + AGA V L
Sbjct: 306 GVSSGQDALEKIRAGASLVQLY 327
Score = 28.0 bits (61), Expect = 3.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 446 GGCTSPGDVAKAMGAGADFVMLG 468
GG +S D + + AGA V L
Sbjct: 305 GGVSSGQDALEKIRAGASLVQLY 327
Score = 26.9 bits (58), Expect = 8.2
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 162 VIIAGNVVTGEMVEELILSGADVIKVGIG 190
+I G V +G+ E I +GA ++++
Sbjct: 301 IIGVGGVSSGQDALEKIRAGASLVQLYTA 329
>d1hg3a_ c.1.1.1 (A:) Triosephosphate isomerase {Archaeon Pyrococcus
woesei [TaxId: 2262]}
Length = 224
Score = 28.8 bits (63), Expect = 1.6
Identities = 12/64 (18%), Positives = 21/64 (32%)
Query: 406 VMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCTSPGDVAKAMGAGADFV 465
V + + LV +N + + G ++ DV KA+ G V
Sbjct: 142 VEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGV 201
Query: 466 MLGG 469
+L
Sbjct: 202 LLAS 205
Score = 27.3 bits (59), Expect = 5.1
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 384 VADGGCTSPGDVAKAMGAGADFVMLGG 410
+ G ++ DV KA+ G V+L
Sbjct: 179 LCGAGISTGEDVKKAIELGTVGVLLAS 205
>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus
subtilis [TaxId: 1423]}
Length = 251
Score = 28.6 bits (64), Expect = 2.2
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 389 CTSPGDVAKAMGA-GADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGG 447
+ +A+ + G +M G G Q N+ ++ + + +VD G
Sbjct: 132 TSDDVVLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFII------EQAKVPVIVDAG 185
Query: 448 CTSPGDVAKAMGAGADFVMLG 468
SP D A AM GAD V+L
Sbjct: 186 IGSPKDAAYAMELGADGVLLN 206
Score = 27.1 bits (60), Expect = 7.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 384 VADGGCTSPGDVAKAMGAGADFVMLG 409
+ D G SP D A AM GAD V+L
Sbjct: 181 IVDAGIGSPKDAAYAMELGADGVLLN 206
>d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida
[TaxId: 303]}
Length = 374
Score = 28.7 bits (63), Expect = 2.7
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 129 LPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSG-ADVIKV 187
L + + D G F ++R+ + +I GN + + AD +
Sbjct: 266 LAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGN-YDAGRAQARLDDNTADAVAF 324
Query: 188 G 188
G
Sbjct: 325 G 325
>d1vqoe2 d.141.1.1 (E:80-172) Ribosomal protein L6 {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 93
Score = 26.6 bits (59), Expect = 3.0
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 156 EMYPKHVIIAGNVVTGEMVEELILSGADVIKVGIGPGSV-CTTRLKNKTSDFFL 208
E P+ I G+ EEL +SG D+ VG + TR+ +K F
Sbjct: 31 EKAPRRTTIHGDTDVEIDGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQ 84
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 152
Score = 27.5 bits (60), Expect = 3.1
Identities = 21/117 (17%), Positives = 36/117 (30%), Gaps = 5/117 (4%)
Query: 72 MAKHLAKHG--LFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISA---KDLAGLKEIL 126
+A L G + T++ +A V + + S + L
Sbjct: 15 LASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVALGAAR 74
Query: 127 AALPEIEYICLDVANGYTQTFVDFVRRIREMYPKHVIIAGNVVTGEMVEELILSGAD 183
A + I +D+ N +T I + I G+V +I SG D
Sbjct: 75 RAGRHVRGIYVDINNISPETVRMASSLIEKGGFVDAAIMGSVRRKGADIRIIASGRD 131
>d2ge7a1 d.254.1.2 (A:8-114) Coronavirus nucleocapsid protein {Avian
infectious bronchitis virus [TaxId: 11120]}
Length = 107
Score = 27.0 bits (60), Expect = 3.2
Identities = 9/56 (16%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
Query: 252 LKTGVGYPQFSAVLECADAAHGL--GGHIISFLTAMAQKIINDIKLDFKDVMLRPK 305
+ G+ + +A+L ++H G + L + + L F+ + P+
Sbjct: 34 NEEGIKDGRVTAMLNLVPSSHACLFGSRVTPKLQP------DGLHLKFEFTTVVPR 83
>d2giba1 d.254.1.2 (A:270-366) Coronavirus nucleocapsid protein
{SARS coronavirus [TaxId: 227859]}
Length = 97
Score = 26.7 bits (59), Expect = 3.2
Identities = 7/56 (12%), Positives = 17/56 (30%), Gaps = 8/56 (14%)
Query: 252 LKTGVGYPQFSAVLECADAAHGL--GGHIISFLTAMAQKIINDIKLDFKDVMLRPK 305
++ G Y + + + A +A I +T + L + +
Sbjct: 24 IRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTP------SGTWLTYHGAIKLDD 73
>d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase
{Plasmodium falciparum [TaxId: 5833]}
Length = 409
Score = 28.4 bits (62), Expect = 3.5
Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 151 VRRIREMYPKHVII--AGNVVTGEMVEELILSGADVIKVGIG 190
+ + K + I +G + +G E I +GA V ++
Sbjct: 332 ICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSC 373
Score = 27.6 bits (60), Expect = 5.4
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 387 GGCTSPGDVAKAMGAGADFVMLG 409
GG S D + + AGA L
Sbjct: 349 GGIFSGLDALEKIEAGASVCQLY 371
Score = 27.6 bits (60), Expect = 5.4
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 446 GGCTSPGDVAKAMGAGADFVMLG 468
GG S D + + AGA L
Sbjct: 349 GGIFSGLDALEKIEAGASVCQLY 371
>d1h5ya_ c.1.2.1 (A:) Cyclase subunit (or domain) of
imidazoleglycerolphosphate synthase HisF {Archaeon
Pyrobaculum aerophilum [TaxId: 13773]}
Length = 252
Score = 27.3 bits (60), Expect = 6.0
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 19/81 (23%)
Query: 345 TFEMAKHLAKHG----LFTTIHKYYTLEEWKAFAVQNPDVIKHVAD---------GGCTS 391
+ AK + + G L T+I + T + + ++I+ VAD GG
Sbjct: 155 AVKWAKEVEELGAGEILLTSIDRDGTGLGY------DVELIRRVADSVRIPVIASGGAGR 208
Query: 392 PGDVAKAMGAGADFVMLGGMF 412
+A AGAD V+ +F
Sbjct: 209 VEHFYEAAAAGADAVLAASLF 229
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 265
Score = 26.9 bits (59), Expect = 6.9
Identities = 31/204 (15%), Positives = 56/204 (27%), Gaps = 24/204 (11%)
Query: 225 EMVEELILSGADVIKVGIGPGSVCT-----TRLKTGVGYPQFSAVLECAD-AAHGLGGHI 278
E + L +G +++++ GS + + D L
Sbjct: 35 ETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPALSEKD 94
Query: 279 ISFLTAMAQKIINDIKLDF----KDVMLRPKRSTLKSRSEVDITRTFTFRNSGKTYQGVP 334
L + ++ + F DV+ R L + + D+ N
Sbjct: 95 KEDLRFGVKNGVHMVFASFIRTANDVL--TIREVLGEQGK-DVKIIVKIENQQGVNNFDE 151
Query: 335 IIAANMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVI-KHVADGGCTSP- 392
I+ G L + K+ P + + + +P
Sbjct: 152 ILKVTD---GVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPR 208
Query: 393 ------GDVAKAMGAGADFVMLGG 410
DV A+ GAD VML G
Sbjct: 209 PTRAEVSDVGNAILDGADCVMLSG 232
>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate
phosphoribosyltransferase EF2626 {Enterococcus faecalis
[TaxId: 1351]}
Length = 345
Score = 26.9 bits (59), Expect = 8.6
Identities = 23/134 (17%), Positives = 44/134 (32%), Gaps = 19/134 (14%)
Query: 63 NMDTVGTFEMAKHLAKHGLFTTIHKYYTLEEWKAFAVQNPDVIKHVAVSSGISAKDLAGL 122
+ GT A H L + E + A+A + D + V + A G+
Sbjct: 56 GIPVSGT--HA-----HSLVQSYGN--DYEAFMAYAKTHRDCVFLVDTYDTLKA----GV 102
Query: 123 KEILAALPEI-EYICLDVANGYTQTFVDFVRRIREMYPKH-----VIIAGNVVTGEMVEE 176
+ E+ + I + +R+RE + I A N + +
Sbjct: 103 PSAIRVAREMGDKINFLGVRIDSGDMAYISKRVREQLDEAGFTEAKIYASNDLDENTILN 162
Query: 177 LILSGADVIKVGIG 190
L + + + G+G
Sbjct: 163 LKMQKSKIDVWGVG 176
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId:
562]}
Length = 213
Score = 26.4 bits (58), Expect = 9.1
Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 24/136 (17%)
Query: 333 VPIIAANMDTVGTFEMAKHLAKHGLFT---TIHKYYTLEEWKAFAVQNPDVIKHVADGGC 389
VP+I MAK L G+ T+ ++ +A A + P+ I G
Sbjct: 18 VPVIVVK-KLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGA--GTV 74
Query: 390 TSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLVGDMNSYLGGVVDGGCT 449
+P +A+ AGA F + G + + + G +
Sbjct: 75 LNPQQLAEVTEAGAQFAISPG------------------LTEPLLKAATEGTIPLIPGIS 116
Query: 450 SPGDVAKAMGAGADFV 465
+ ++ M G
Sbjct: 117 TVSELMLGMDYGLKEF 132
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId:
303]}
Length = 216
Score = 26.5 bits (58), Expect = 9.3
Identities = 20/162 (12%), Positives = 42/162 (25%), Gaps = 29/162 (17%)
Query: 332 GVPIIAANMDTVGTFEMAKHLAKHGL-----FTTIHKYYTLEEWKAFAVQ-------NPD 379
G+ + + + + + L + T+ +A Q D
Sbjct: 42 GIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPGITED 101
Query: 380 VIKHVADG------GCTSPGDVAKAMGAGADFVMLGGMFAGHDQSGGELTNIEYMFFPLV 433
+++ D G ++P ++ G +F G + I+ P
Sbjct: 102 ILEAGVDSEIPLLPGISTPSEIMMGYALGYRRFK---LFPAEISGG--VAAIKAFGGPFG 156
Query: 434 GDMNSYLGGVVDGGCTSPGDVAKAMGAGADFVMLGGMFAGHD 475
GGV +P +V M +
Sbjct: 157 DIRFCPTGGV------NPANVRNYMALPNVMCVGTTWMLDSS 192
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.401
Gapped
Lambda K H
0.267 0.0658 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,513,901
Number of extensions: 121754
Number of successful extensions: 703
Number of sequences better than 10.0: 1
Number of HSP's gapped: 659
Number of HSP's successfully gapped: 111
Length of query: 671
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 580
Effective length of database: 1,158,166
Effective search space: 671736280
Effective search space used: 671736280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.5 bits)