Your job contains 1 sequence.
>psy3865
MDELNLFRGDTVLLRGKRRKESAKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEK
IRMNRVMRNNLRVRLSDVVSLVPCPGIVYGKRIHVLPIDDSVQGLTG
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3865
(107 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|C9IZA5 - symbol:VCP "Transitional endoplasmic r... 261 1.6e-22 1
UNIPROTKB|C9JUP7 - symbol:VCP "Transitional endoplasmic r... 261 1.6e-22 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 270 2.4e-22 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 270 2.4e-22 1
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 270 2.4e-22 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 269 3.0e-22 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 269 3.0e-22 1
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 266 6.4e-22 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 266 6.4e-22 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 266 6.4e-22 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 266 6.4e-22 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 266 6.4e-22 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 266 6.4e-22 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 266 6.4e-22 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 266 6.6e-22 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 258 4.6e-21 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 245 1.1e-19 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 237 8.3e-19 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 237 8.3e-19 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 221 4.3e-17 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 218 9.0e-17 1
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 207 1.4e-15 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 206 1.7e-15 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 206 1.7e-15 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 198 1.2e-14 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 186 2.5e-13 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 185 3.1e-13 1
UNIPROTKB|I3L8Y2 - symbol:I3L8Y2 "Uncharacterized protein... 171 5.6e-13 1
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 171 7.6e-13 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 181 8.5e-13 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 181 8.5e-13 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 176 2.9e-12 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 174 4.8e-12 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 174 4.8e-12 1
>UNIPROTKB|C9IZA5 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0005102 "receptor binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0031593
"polyubiquitin binding" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR005938 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043234 GO:GO:0051260 GO:GO:0016887 GO:GO:0006919
GO:GO:0006511 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0070842 EMBL:AL353795 HGNC:HGNC:12666 ChiTaRS:VCP
IPI:IPI00915799 ProteinModelPortal:C9IZA5 SMR:C9IZA5 STRING:C9IZA5
PRIDE:C9IZA5 Ensembl:ENST00000448530 HOGENOM:HOG000184195
ArrayExpress:C9IZA5 Bgee:C9IZA5 Uniprot:C9IZA5
Length = 160
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 50/83 (60%), Positives = 58/83 (69%)
Query: 25 MDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXPC 84
MDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI PC
Sbjct: 1 MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPC 60
Query: 85 PGIVYGKRIHVLPIDDSVQGLTG 107
P + YGKRIHVLPIDD+V+G+TG
Sbjct: 61 PDVKYGKRIHVLPIDDTVEGITG 83
Score = 92 (37.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 1 MDELQLFRGDTVLLKGKKRREA 22
Score = 34 (17.0 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 103 KGDIFLVRGGMRAVEFKVVETD 124
>UNIPROTKB|C9JUP7 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0005102 "receptor binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0031593
"polyubiquitin binding" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0070842 "aggresome assembly"
evidence=IEA] InterPro:IPR005938 InterPro:IPR003338 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0043234
GO:GO:0051260 GO:GO:0016887 GO:GO:0006919 GO:GO:0006511
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 PANTHER:PTHR23077:SF18 SMART:SM01073 GO:GO:0070842
EMBL:AL353795 HGNC:HGNC:12666 ChiTaRS:VCP HOGENOM:HOG000184195
IPI:IPI00916175 ProteinModelPortal:C9JUP7 SMR:C9JUP7 STRING:C9JUP7
PRIDE:C9JUP7 Ensembl:ENST00000417448 ArrayExpress:C9JUP7
Bgee:C9JUP7 Uniprot:C9JUP7
Length = 115
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 50/83 (60%), Positives = 58/83 (69%)
Query: 25 MDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXPC 84
MDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI PC
Sbjct: 1 MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPC 60
Query: 85 PGIVYGKRIHVLPIDDSVQGLTG 107
P + YGKRIHVLPIDD+V+G+TG
Sbjct: 61 PDVKYGKRIHVLPIDDTVEGITG 83
Score = 92 (37.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 1 MDELQLFRGDTVLLKGKKRREA 22
Score = 30 (15.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 32 RGDTVLLRGKRR 43
+GD L+RG R
Sbjct: 103 KGDIFLVRGGMR 114
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 270 (100.1 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 52/85 (61%), Positives = 60/85 (70%)
Query: 23 AKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXX 82
AKMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI
Sbjct: 44 AKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQ 103
Query: 83 PCPGIVYGKRIHVLPIDDSVQGLTG 107
PCP + YGKRIHVLPIDD+V+G+TG
Sbjct: 104 PCPDVKYGKRIHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
Score = 34 (17.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 270 (100.1 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 52/85 (61%), Positives = 60/85 (70%)
Query: 23 AKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXX 82
AKMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI
Sbjct: 44 AKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQ 103
Query: 83 PCPGIVYGKRIHVLPIDDSVQGLTG 107
PCP + YGKRIHVLPIDD+V+G+TG
Sbjct: 104 PCPDVKYGKRIHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
Score = 34 (17.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 270 (100.1 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 52/85 (61%), Positives = 60/85 (70%)
Query: 23 AKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXX 82
AKMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI
Sbjct: 44 AKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQ 103
Query: 83 PCPGIVYGKRIHVLPIDDSVQGLTG 107
PCP + YGKRIHVLPIDD+V+G+TG
Sbjct: 104 PCPDVKYGKRIHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
Score = 34 (17.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 269 (99.8 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 51/85 (60%), Positives = 60/85 (70%)
Query: 23 AKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXX 82
AKMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI
Sbjct: 44 AKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQ 103
Query: 83 PCPGIVYGKRIHVLPIDDSVQGLTG 107
PCP + YGKR+HVLPIDD+V+G+TG
Sbjct: 104 PCPDVKYGKRVHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
Score = 34 (17.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 269 (99.8 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 51/85 (60%), Positives = 60/85 (70%)
Query: 23 AKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXX 82
AKMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEK+
Sbjct: 44 AKMDELQLFRGDTVLLKGKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQ 103
Query: 83 PCPGIVYGKRIHVLPIDDSVQGLTG 107
PCP + YGKRIHVLPIDD+V+G+TG
Sbjct: 104 PCPDVKYGKRIHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRRET 67
Score = 34 (17.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 266 (98.7 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 51/84 (60%), Positives = 59/84 (70%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXP 83
KMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI P
Sbjct: 45 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQP 104
Query: 84 CPGIVYGKRIHVLPIDDSVQGLTG 107
CP + YGKRIHVLPIDD+V+G+TG
Sbjct: 105 CPDVKYGKRIHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
Score = 34 (17.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 266 (98.7 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 51/84 (60%), Positives = 59/84 (70%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXP 83
KMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI P
Sbjct: 45 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQP 104
Query: 84 CPGIVYGKRIHVLPIDDSVQGLTG 107
CP + YGKRIHVLPIDD+V+G+TG
Sbjct: 105 CPDVKYGKRIHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
Score = 34 (17.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 266 (98.7 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 51/84 (60%), Positives = 59/84 (70%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXP 83
KMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI P
Sbjct: 45 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 104
Query: 84 CPGIVYGKRIHVLPIDDSVQGLTG 107
CP + YGKRIHVLPIDD+V+G+TG
Sbjct: 105 CPDVKYGKRIHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
Score = 34 (17.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 266 (98.7 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 51/84 (60%), Positives = 59/84 (70%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXP 83
KMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI P
Sbjct: 45 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQP 104
Query: 84 CPGIVYGKRIHVLPIDDSVQGLTG 107
CP + YGKRIHVLPIDD+V+G+TG
Sbjct: 105 CPDVKYGKRIHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
Score = 34 (17.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 266 (98.7 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 51/84 (60%), Positives = 59/84 (70%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXP 83
KMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI P
Sbjct: 45 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 104
Query: 84 CPGIVYGKRIHVLPIDDSVQGLTG 107
CP + YGKRIHVLPIDD+V+G+TG
Sbjct: 105 CPDVKYGKRIHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
Score = 34 (17.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 266 (98.7 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 51/84 (60%), Positives = 59/84 (70%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXP 83
KMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI P
Sbjct: 45 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 104
Query: 84 CPGIVYGKRIHVLPIDDSVQGLTG 107
CP + YGKRIHVLPIDD+V+G+TG
Sbjct: 105 CPDVKYGKRIHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
Score = 34 (17.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 266 (98.7 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 51/84 (60%), Positives = 59/84 (70%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXP 83
KMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI P
Sbjct: 45 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQP 104
Query: 84 CPGIVYGKRIHVLPIDDSVQGLTG 107
CP + YGKRIHVLPIDD+V+G+TG
Sbjct: 105 CPDVKYGKRIHVLPIDDTVEGITG 128
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
Score = 34 (17.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETD 169
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 266 (98.7 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 51/84 (60%), Positives = 59/84 (70%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXP 83
KMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI P
Sbjct: 61 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQP 120
Query: 84 CPGIVYGKRIHVLPIDDSVQGLTG 107
CP + YGKRIHVLPIDD+V+G+TG
Sbjct: 121 CPDVKYGKRIHVLPIDDTVEGITG 144
Score = 92 (37.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 62 MDELQLFRGDTVLLKGKKRREA 83
Score = 34 (17.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 32 RGDTVLLRGKRRKESVCIVLSD 53
+GD L+RG R +V +D
Sbjct: 164 KGDIFLVRGGMRAVEFKVVETD 185
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 258 (95.9 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 49/85 (57%), Positives = 58/85 (68%)
Query: 23 AKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXX 82
AKMDEL LFRGDTV+L+GKRRKE+VCIVLSDDTCPDEKI
Sbjct: 41 AKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQ 100
Query: 83 PCPGIVYGKRIHVLPIDDSVQGLTG 107
CP + YGKR+ +LPID+S +G+TG
Sbjct: 101 SCPDVKYGKRVRILPIDESTEGVTG 125
Score = 112 (44.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 1 MDELNLFRGDTVLLRGKRRKESAKMDELNLFRGDTVLLRGKRRKESVCIVLSD----DTC 56
MDEL LFRGDTV+L+GKRRKE+ + + D + + + ++C+ LSD +C
Sbjct: 43 MDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSC 102
Query: 57 PDEK 60
PD K
Sbjct: 103 PDVK 106
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 245 (91.3 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 44/84 (52%), Positives = 59/84 (70%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXP 83
KM+EL LFRGDTV+LRG++R+++VCIVL+DDTC +E++ P
Sbjct: 47 KMEELQLFRGDTVVLRGRKRRQTVCIVLTDDTCGNERVRMNRVTRNNLRVRLGDVISIHP 106
Query: 84 CPGIVYGKRIHVLPIDDSVQGLTG 107
CP + YGKRIHVLPIDD+++GLTG
Sbjct: 107 CPDVKYGKRIHVLPIDDTIEGLTG 130
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 237 (88.5 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 23 AKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXX 82
AKMDEL LFRGD V+L+GK+RKESV I++SD++CP+EK+
Sbjct: 50 AKMDELGLFRGDAVILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSIT 109
Query: 83 PCPGIVYGKRIHVLPIDDSVQGLTG 107
P P + YG RIHVLPIDD+++GLTG
Sbjct: 110 PAPNLSYGTRIHVLPIDDTIEGLTG 134
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 237 (88.5 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 23 AKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXX 82
AKMDEL LFRGD V+L+GK+RKESV I++SD++CP+EK+
Sbjct: 50 AKMDELGLFRGDAVILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSIT 109
Query: 83 PCPGIVYGKRIHVLPIDDSVQGLTG 107
P P + YG RIHVLPIDD+++GLTG
Sbjct: 110 PAPNLSYGTRIHVLPIDDTIEGLTG 134
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 221 (82.9 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 38/85 (44%), Positives = 56/85 (65%)
Query: 23 AKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXX 82
A M++L LFRGDT+L++GK+RK++VCI L+D+TC + KI
Sbjct: 48 ATMEKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVH 107
Query: 83 PCPGIVYGKRIHVLPIDDSVQGLTG 107
CP + YGKR+H+LP+DD+V+G+TG
Sbjct: 108 QCPDVKYGKRVHILPVDDTVEGVTG 132
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 218 (81.8 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 37/83 (44%), Positives = 55/83 (66%)
Query: 25 MDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXPC 84
M++L LFRGDT+L++GK+RK++VCI L+D+TC + KI C
Sbjct: 50 MEKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQC 109
Query: 85 PGIVYGKRIHVLPIDDSVQGLTG 107
P + YGKR+H+LP+DD+V+G+TG
Sbjct: 110 PDVKYGKRVHILPVDDTVEGVTG 132
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 207 (77.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 34/83 (40%), Positives = 54/83 (65%)
Query: 25 MDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXPC 84
M++L LFRGDT+L++GK+RK++VCI L+D+TC + KI C
Sbjct: 51 MEKLQLFRGDTILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQC 110
Query: 85 PGIVYGKRIHVLPIDDSVQGLTG 107
P + YG R+H+LP+DD+++G++G
Sbjct: 111 PDVKYGNRVHILPLDDTIEGVSG 133
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 206 (77.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 41/85 (48%), Positives = 55/85 (64%)
Query: 23 AKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXX 82
AKMDEL LFRGD+V+L+GK+R+E+V IVL+ D CP++KI
Sbjct: 50 AKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSIS 109
Query: 83 PCPGIVYGKRIHVLPIDDSVQGLTG 107
+ YGKR+HVLPIDD+++GLTG
Sbjct: 110 SAQ-LEYGKRVHVLPIDDTIEGLTG 133
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 206 (77.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 41/85 (48%), Positives = 55/85 (64%)
Query: 23 AKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXX 82
AKMDEL LFRGD+V+L+GK+R+E+V IVL+ D CP++KI
Sbjct: 50 AKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSIS 109
Query: 83 PCPGIVYGKRIHVLPIDDSVQGLTG 107
+ YGKR+HVLPIDD+++GLTG
Sbjct: 110 SAQ-LEYGKRVHVLPIDDTIEGLTG 133
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 198 (74.8 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 25 MDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXPC 84
MD+L FRGDT+L++GK+R+++VCIVLSD T KI C
Sbjct: 45 MDQLQFFRGDTLLIKGKKRRDTVCIVLSDPTIDPSKIRMNKVVRNNLRVRLGDMISVHQC 104
Query: 85 PGIVYGKRIHVLPIDDSVQGLTG 107
+ YGKRIHVLPIDD+++GL+G
Sbjct: 105 SDVKYGKRIHVLPIDDTIEGLSG 127
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 186 (70.5 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 41/83 (49%), Positives = 47/83 (56%)
Query: 25 MDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXPC 84
MD L LFRGDTV +RGK+RKE+V IVL+DD D PC
Sbjct: 67 MDTLGLFRGDTVTVRGKKRKETVLIVLADDDLDDGSARINRVVRHNLRVKHGDIITVHPC 126
Query: 85 PGIVYGKRIHVLPIDDSVQGLTG 107
P I Y KRI VLPI D+V+GLTG
Sbjct: 127 PDIKYAKRIAVLPIADTVEGLTG 149
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 185 (70.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 40/86 (46%), Positives = 50/86 (58%)
Query: 22 SAKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXX 81
++ M+ L LFRGDTVL+RGK+RK++V IVL+DD D
Sbjct: 61 NSTMEALQLFRGDTVLVRGKKRKDTVLIVLADDELDDGSARLNRVVRHNLRVKHGDVVTI 120
Query: 82 XPCPGIVYGKRIHVLPIDDSVQGLTG 107
PCP I Y KRI VLPI D+V+GLTG
Sbjct: 121 HPCPDIKYAKRIAVLPIADTVEGLTG 146
>UNIPROTKB|I3L8Y2 [details] [associations]
symbol:I3L8Y2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR005938 InterPro:IPR003338 Pfam:PF02359 GO:GO:0016787
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
PANTHER:PTHR23077:SF18 SMART:SM01073 GeneTree:ENSGT00700000104534
EMBL:CU856695 Ensembl:ENSSSCT00000032186 Uniprot:I3L8Y2
Length = 106
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 32/38 (84%), Positives = 36/38 (94%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKI 61
KMDEL LFRGDTVLL+GK+R+E+VCIVLSDDTC DEKI
Sbjct: 45 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKI 82
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 17/22 (77%), Positives = 21/22 (95%)
Query: 1 MDELNLFRGDTVLLRGKRRKES 22
MDEL LFRGDTVLL+GK+R+E+
Sbjct: 46 MDELQLFRGDTVLLKGKKRREA 67
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 171 (65.3 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 37/86 (43%), Positives = 49/86 (56%)
Query: 22 SAKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXX 81
S M+ L LFRGDTV+++GKRRK++V IVL+D+ D
Sbjct: 63 SNTMETLQLFRGDTVVVKGKRRKDTVLIVLTDEEMEDGVARINRVVRNNLRVRLGDIVTI 122
Query: 82 XPCPGIVYGKRIHVLPIDDSVQGLTG 107
PCP I Y +RI VLP+ D+V+GLTG
Sbjct: 123 NPCPDIKYAERISVLPLADTVEGLTG 148
Score = 35 (17.4 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 11 TVLLRGKRRKESAKMDE 27
T +LR KR+ S +D+
Sbjct: 34 TAILRKKRKPNSLVVDD 50
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 181 (68.8 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXP 83
+M+ELN FRGDT++++GK+R ++CI+L+D+ + KI
Sbjct: 48 RMEELNFFRGDTIIIKGKKRHSTICIILNDNDLDEGKIRINKVARKNLRVCLGDVVYVKS 107
Query: 84 CPGIVYGKRIHVLPIDDSVQGL 105
CP I YGK+I VLPIDD+++GL
Sbjct: 108 CPEIPYGKKIQVLPIDDTIEGL 129
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 181 (68.8 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 24 KMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXXXP 83
+M+ELN FRGDT++++GK+R ++CI+L+D+ + KI
Sbjct: 48 RMEELNFFRGDTIIIKGKKRHSTICIILNDNDLDEGKIRINKVARKNLRVCLGDVVYVKS 107
Query: 84 CPGIVYGKRIHVLPIDDSVQGL 105
CP I YGK+I VLPIDD+++GL
Sbjct: 108 CPEIPYGKKIQVLPIDDTIEGL 129
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 176 (67.0 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 38/86 (44%), Positives = 48/86 (55%)
Query: 22 SAKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXX 81
S MD+L LFRGDTVL++GK+RK++V IVL DD D
Sbjct: 53 SNTMDKLELFRGDTVLVKGKKRKDTVLIVLIDDELEDGACRINRVVRNNLRIRLGDLVTI 112
Query: 82 XPCPGIVYGKRIHVLPIDDSVQGLTG 107
PCP I Y RI VLPI D+++G+TG
Sbjct: 113 HPCPDIKYATRISVLPIADTIEGITG 138
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 174 (66.3 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 38/86 (44%), Positives = 48/86 (55%)
Query: 22 SAKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXX 81
S M+ L LFRGDTVL++GK+RK++V IVL+DD PD
Sbjct: 54 SNTMELLQLFRGDTVLVKGKKRKDTVLIVLADDDMPDGVARVNRCVRNNLRVRLGDIVTV 113
Query: 82 XPCPGIVYGKRIHVLPIDDSVQGLTG 107
PCP I Y RI VLPI D+V+G+ G
Sbjct: 114 HPCPDIKYANRISVLPIADTVEGING 139
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 174 (66.3 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 38/86 (44%), Positives = 48/86 (55%)
Query: 22 SAKMDELNLFRGDTVLLRGKRRKESVCIVLSDDTCPDEKIXXXXXXXXXXXXXXXXXXXX 81
S M+ L LFRGDTVL++GK+RK++V IVL+DD PD
Sbjct: 54 SNTMELLQLFRGDTVLVKGKKRKDTVLIVLADDDMPDGVARVNRCVRNNLRVRLGDIVTV 113
Query: 82 XPCPGIVYGKRIHVLPIDDSVQGLTG 107
PCP I Y RI VLPI D+V+G+ G
Sbjct: 114 HPCPDIKYANRISVLPIADTVEGING 139
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.144 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 107 86 0.00091 102 3 11 22 0.45 29
29 0.47 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 446 (48 KB)
Total size of DFA: 81 KB (2065 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.11u 0.08s 8.19t Elapsed: 00:00:05
Total cpu time: 8.11u 0.08s 8.19t Elapsed: 00:00:05
Start: Thu Aug 15 14:21:52 2013 End: Thu Aug 15 14:21:57 2013