BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3866
(70 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242017076|ref|XP_002429019.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212513865|gb|EEB16281.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 373
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 2 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNP 61
M+P D VLVA+SGS +S ALLH+L G+ HK+ LF V +ID+G++ + LNP
Sbjct: 1 MKPNDNVLVAYSGSQASTALLHMLYSGLSEKHHKKFLFKVIVFFIDEGALFE----NLNP 56
Query: 62 N 62
+
Sbjct: 57 D 57
>gi|196004278|ref|XP_002112006.1| hypothetical protein TRIADDRAFT_55610 [Trichoplax adhaerens]
gi|190585905|gb|EDV25973.1| hypothetical protein TRIADDRAFT_55610 [Trichoplax adhaerens]
Length = 456
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 42/58 (72%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSK 58
++R +KVL+AFSG S A+L+L+ EG+ + HK++ F ++IDDG+I Q+S+++
Sbjct: 61 LIRSNEKVLLAFSGGPRSSAMLYLVHEGLSENIHKKLRFLPGVVFIDDGAILQLSENE 118
>gi|390340889|ref|XP_790635.3| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like
[Strongylocentrotus purpuratus]
Length = 410
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++R ++KVL+AFSG +S A+ L+ EG + HKR F IYIDDG I+Q + +
Sbjct: 63 LIRDKEKVLIAFSGGQNSSAVARLIHEGRSENQHKRFRFVPSLIYIDDGIITQQTPEERR 122
Query: 61 PN 62
N
Sbjct: 123 AN 124
>gi|443701547|gb|ELT99947.1| hypothetical protein CAPTEDRAFT_223722 [Capitella teleta]
Length = 452
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49
++R +++VLVA SG +S A+LHL+QEG +HK++ FS ++IDDG
Sbjct: 65 LIRDKEQVLVAHSGGPASCAMLHLIQEGTSRRAHKKLRFSSVLVFIDDG 113
>gi|307178089|gb|EFN66916.1| Fatty-acid amide hydrolase 2 [Camponotus floridanus]
Length = 934
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
++R D +LV SG +S LLHL++ GM S+HK+++F +YIDDG I
Sbjct: 544 IIRQGDSILVDHSGELNSTVLLHLIKSGMSQSAHKKLIFKTLILYIDDGDI 594
>gi|340377678|ref|XP_003387356.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 A-like
[Amphimedon queenslandica]
Length = 412
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
++R ++VL+AFSG SS LLHL+QEG+ + KR+ F+ IYID+G +
Sbjct: 65 LIRQGEEVLLAFSGGQSSRVLLHLVQEGLSEHAVKRLRFTPIIIYIDEGVV 115
>gi|427782915|gb|JAA56909.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 423
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYI-DDGSI 51
+++P +KVLVAFSG SS A+L LL++G +HK++LF +Y+ DD S+
Sbjct: 72 LLKPGNKVLVAFSGGPSSAAMLRLLRDGFSEDTHKKLLFEPSLVYVYDDSSV 123
>gi|242001366|ref|XP_002435326.1| conserved hypothetical protein [Ixodes scapularis]
gi|215498656|gb|EEC08150.1| conserved hypothetical protein [Ixodes scapularis]
Length = 425
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
+++P+ K+LVAFSG SS A+L LL +G +HKR LF +IDD S KS+ +
Sbjct: 68 LIKPKQKILVAFSGGPSSAAMLTLLLDGFAEDAHKRFLFEPHLAHIDDSVAS--GKSEAD 125
Query: 61 PNF 63
P+
Sbjct: 126 PSL 128
>gi|260829697|ref|XP_002609798.1| hypothetical protein BRAFLDRAFT_264956 [Branchiostoma floridae]
gi|229295160|gb|EEN65808.1| hypothetical protein BRAFLDRAFT_264956 [Branchiostoma floridae]
Length = 423
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSH-KRILFSVCAIYIDDGSISQ 53
+++P +KVL+AFSG SS ALLHL++ GM+ + KR+ ++ID+GSI Q
Sbjct: 64 VVQPGEKVLLAFSGGPSSAALLHLVKRGMEEGTQKKRLRIEPGVVFIDEGSIIQ 117
>gi|332373848|gb|AEE62065.1| unknown [Dendroctonus ponderosae]
Length = 402
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49
++ P+D+VL+A H +M+LLHLL+ G+ L++ K++ F +Y++D
Sbjct: 69 LIHPKDRVLIACETGHPTMSLLHLLRSGLDLNTQKKLRFEPVLVYVEDN 117
>gi|307208407|gb|EFN85786.1| UPF0432 protein C16orf84-like protein [Harpegnathos saltator]
Length = 423
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++R D VLV SG +S LLH+++ GM S+HK+ +F +YIDD + ++ + N
Sbjct: 20 IIRHGDSVLVDHSGELNSTILLHMIKAGMSESTHKKFMFKTTVLYIDDATSNKTTNEDRN 79
>gi|193650171|ref|XP_001946547.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 A-like
[Acyrthosiphon pisum]
Length = 438
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Query: 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID-----DGSISQVSKSK 58
++VLV SGS SS++LLH++ G+Q S++KR+ F +YID D + QV K K
Sbjct: 70 ERVLVCVSGSQSSVSLLHMIWTGLQQSTYKRLTFEPVVLYIDESVLHDYPLDQVKKIK 127
>gi|91093457|ref|XP_966933.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
Length = 200
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48
++RP D+VLV H S ALLH ++ G+ L +HK++ F ++I++
Sbjct: 70 LIRPNDRVLVIHKCGHPSTALLHFIRSGLDLETHKKLRFEPVVLFIEE 117
>gi|270012676|gb|EFA09124.1| hypothetical protein TcasGA2_TC015985 [Tribolium castaneum]
Length = 329
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48
++RP D+VLV H S ALLH ++ G+ L +HK++ F ++I++
Sbjct: 70 LIRPNDRVLVIHKCGHPSTALLHFIRSGLDLETHKKLRFEPVVLFIEE 117
>gi|332026706|gb|EGI66815.1| Cytoplasmic tRNA 2-thiolation protein 2 A [Acromyrmex echinatior]
Length = 430
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48
++R DK+L+ G +S LLHL++ GM S+HKR++F +Y+DD
Sbjct: 42 IIRHGDKILIDHLGELNSTVLLHLVKAGMSESAHKRLIFEAVILYVDD 89
>gi|405976867|gb|EKC41346.1| Cytoplasmic tRNA 2-thiolation protein 2 [Crassostrea gigas]
Length = 702
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++R + VLV SG +S LLHL+QEG+ +HK++ F ++ID+G+
Sbjct: 287 LIRDGESVLVGVSGGQASSCLLHLIQEGLSGRAHKKLRFKPGLVFIDEGA 336
>gi|89886161|ref|NP_001034829.1| cytoplasmic tRNA 2-thiolation protein 2 [Xenopus (Silurana)
tropicalis]
gi|123892781|sp|Q28ES8.1|CTU2_XENTR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|89269899|emb|CAJ83521.1| novel protein [Xenopus (Silurana) tropicalis]
gi|189441975|gb|AAI67302.1| hypothetical LOC548371 [Xenopus (Silurana) tropicalis]
gi|213624140|gb|AAI70700.1| hypothetical LOC548371 [Xenopus (Silurana) tropicalis]
gi|213625482|gb|AAI70702.1| hypothetical LOC548371 [Xenopus (Silurana) tropicalis]
Length = 516
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNF 63
P +KVL+AFSG SS A++ +QEGM + K++ F ++ID+G+ +S + N
Sbjct: 68 PGEKVLLAFSGGPSSSAMVQQVQEGMSRDAPKKLRFVPGILFIDEGTTCGMSHEERQQNM 127
Query: 64 GSV 66
V
Sbjct: 128 SEV 130
>gi|58477695|gb|AAH89700.1| hypothetical LOC548371 [Xenopus (Silurana) tropicalis]
Length = 525
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNF 63
P +KVL+AFSG SS A++ +QEGM + K++ F ++ID+G+ +S + N
Sbjct: 77 PGEKVLLAFSGGPSSSAMVQQVQEGMSRDAPKKLRFVPGILFIDEGTTCGMSHEERQQNM 136
Query: 64 GSV 66
V
Sbjct: 137 SEV 139
>gi|383854273|ref|XP_003702646.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 A-like
[Megachile rotundata]
Length = 480
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 2 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49
+RP D VLVA SG +S L+HL+ + S+ K+I F +YIDDG
Sbjct: 79 IRPTDTVLVAHSGKANSTVLVHLIAANINESTFKKIPFHCKVLYIDDG 126
>gi|363738244|ref|XP_414210.3| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Gallus
gallus]
Length = 479
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
P +KVL+A SG +S A+L +QEG+ + KR+ F IYID+G++
Sbjct: 73 PGEKVLLALSGGMASSAMLRQVQEGLSRETAKRLRFVPGLIYIDEGAV 120
>gi|326927536|ref|XP_003209948.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Meleagris
gallopavo]
Length = 487
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
P +KVL+A SG +S A+L +QEG+ + KR+ F IYID+G++
Sbjct: 56 PGEKVLLALSGGMASSAMLRQVQEGLSRETAKRLRFVPGLIYIDEGAV 103
>gi|345320828|ref|XP_001521802.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like, partial
[Ornithorhynchus anatinus]
Length = 542
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 36/51 (70%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
++ P +KVL+A+SG SS +++ +QEG+ S KR+ F+ +Y+D+G++
Sbjct: 45 LIFPGEKVLLAWSGGPSSSSMISQVQEGLSRESAKRLRFAPGIVYVDEGAV 95
>gi|322801373|gb|EFZ22034.1| hypothetical protein SINV_01175 [Solenopsis invicta]
Length = 445
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQ 53
++R D +LV +G +S LLHL++ GM S+HK+++F +YID ++ +
Sbjct: 54 IIRHGDLILVDHTGELNSTVLLHLIKAGMSESTHKKLIFKTVVLYIDGCTVEE 106
>gi|395508485|ref|XP_003758541.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Sarcophilus
harrisii]
Length = 589
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
++ P +KVL+A+SG SS +++ +QEG+ S KR+ F IY+D+G++
Sbjct: 137 LIFPGEKVLLAWSGGPSSSSMIWQVQEGLSRESAKRLRFVPGVIYVDEGAV 187
>gi|126304966|ref|XP_001376877.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like
[Monodelphis domestica]
Length = 520
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
++ P +KVL+A+SG SS +++ +QEG+ S KR+ F IYID+G++
Sbjct: 69 LIFPGEKVLLAWSGGPSSSSMIWQVQEGLSRESAKRLRFVPGIIYIDEGAV 119
>gi|57525867|ref|NP_001003560.1| cytoplasmic tRNA 2-thiolation protein 2 [Danio rerio]
gi|82182163|sp|Q6DC53.1|CTU2_DANRE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|50417844|gb|AAH78233.1| Zgc:101113 [Danio rerio]
Length = 501
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49
PQ+KVL+A SG +S +L +QEG+ + K++ F +YIDDG
Sbjct: 70 PQEKVLLAVSGGAASCTMLSQVQEGLSRDAPKKLRFMPGIVYIDDG 115
>gi|340714532|ref|XP_003395781.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 A-like [Bombus
terrestris]
Length = 492
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 2 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
+RP D +LVA SG +S ALLHL+ S K++ S +YIDDG +
Sbjct: 80 IRPNDSILVAHSGKANSTALLHLIMVDTNESISKKLQPSFKVLYIDDGMV 129
>gi|328791116|ref|XP_001122723.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Apis
mellifera]
Length = 494
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 2 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVS 55
+R D VL+A SG +S LLHL+ + S K++ F +YIDDG I + S
Sbjct: 80 VRANDTVLIAHSGKANSTVLLHLITADINKSISKKLKFPFKVLYIDDGVIKKRS 133
>gi|327287782|ref|XP_003228607.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Anolis
carolinensis]
Length = 428
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
P +KVL+AFSG +S +++ +QEG+ + K++ F +YID+G++
Sbjct: 43 PGEKVLLAFSGGPASSSMVRQVQEGLSQGAAKKLRFKPGIVYIDEGAV 90
>gi|380025327|ref|XP_003696426.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Apis
florea]
Length = 495
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 2 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVS 55
+R D VL+A SG +S LLHL+ + S K++ F +YIDDG I + S
Sbjct: 82 VRANDTVLIAHSGKANSTVLLHLITADVNKSISKKLKFPFKVLYIDDGIIKKRS 135
>gi|47125206|gb|AAH70752.1| LOC431806 protein [Xenopus laevis]
Length = 518
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNF 63
P +KVL+A+SG SS A++ +QEG+ + K++ F ++ID+G+ +S +
Sbjct: 74 PGEKVLLAYSGGPSSSAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQIL 133
Query: 64 GSVC 67
+C
Sbjct: 134 SEIC 137
>gi|158564272|sp|Q32NV1.2|CTU2B_XENLA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2 B
Length = 512
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNF 63
P +KVL+A+SG SS A++ +QEG+ + K++ F ++ID+G+ +S +
Sbjct: 68 PGEKVLLAYSGGPSSSAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQIL 127
Query: 64 GSVC 67
+C
Sbjct: 128 SEIC 131
>gi|80477530|gb|AAI08466.1| LOC431806 protein [Xenopus laevis]
Length = 520
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNF 63
P +KVL+A+SG SS A++ +QEG+ + K++ F ++ID+G+ +S +
Sbjct: 76 PGEKVLLAYSGGPSSSAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQIL 135
Query: 64 GSVC 67
+C
Sbjct: 136 SEIC 139
>gi|66911532|gb|AAH97664.1| Unknown (protein for IMAGE:6633620), partial [Xenopus laevis]
Length = 522
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNF 63
P +KVL+A+SG SS A++ +QEG+ + K++ F ++ID+G+ +S +
Sbjct: 78 PGEKVLLAYSGGPSSSAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQIL 137
Query: 64 GSVC 67
+C
Sbjct: 138 SEIC 141
>gi|291290957|ref|NP_001167511.1| cytoplasmic tRNA 2-thiolation protein 2 A [Xenopus laevis]
gi|123884208|sp|Q08B12.1|CTU2A_XENLA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2 A
gi|115528674|gb|AAI24922.1| Unknown (protein for MGC:154644) [Xenopus laevis]
Length = 512
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNF 63
P +KVL+A+SG SS A++ +QEG+ + K++ F ++ID+G+ +S +
Sbjct: 68 PGEKVLLAYSGGPSSSAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQIL 127
Query: 64 GSVC 67
+C
Sbjct: 128 SEIC 131
>gi|340379669|ref|XP_003388349.1| PREDICTED: hypothetical protein LOC100635741 [Amphimedon
queenslandica]
Length = 873
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
M+R D+VLV SG S++LLH L + ++ K ILFS+ A+ +D S
Sbjct: 640 MIRDGDRVLVCLSGGKDSLSLLHTLNQYQFIAKSKGILFSLGAVTVDPKS 689
>gi|410900400|ref|XP_003963684.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Takifugu
rubripes]
Length = 586
Score = 40.8 bits (94), Expect = 0.100, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49
P +KVL+A SG SS ++L +Q+G+ ++HK++ F ++ID+G
Sbjct: 144 PGEKVLLAVSGGPSSCSMLSQVQQGLSQNAHKKLRFVPGIVFIDEG 189
>gi|119587180|gb|EAW66776.1| hypothetical protein LOC348180, isoform 1, isoform CRA_b [Homo
sapiens]
Length = 207
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|119587182|gb|EAW66778.1| hypothetical protein LOC348180, isoform 1, isoform CRA_d [Homo
sapiens]
Length = 181
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNF 63
P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 71 PGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTL 130
Query: 64 GSVCP 68
V P
Sbjct: 131 AEVKP 135
>gi|431838566|gb|ELK00498.1| Cytoplasmic tRNA 2-thiolation protein 2 [Pteropus alecto]
Length = 508
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
++ P +KVL+A+SG SS +++ + EG+ S KR+ F +YID+G++
Sbjct: 67 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSRDSAKRLRFVPGVVYIDEGAV 117
>gi|198437911|ref|XP_002122274.1| PREDICTED: similar to UPF0432 protein C16orf84 homolog B [Ciona
intestinalis]
Length = 432
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 36/48 (75%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48
++R DKV +A+SG ++S ALL+L+++G+ ++ K++ F+ I++D+
Sbjct: 62 LVRHHDKVALAYSGGNNSSALLNLIKKGLDPATVKKLKFTPGLIFVDE 109
>gi|444722187|gb|ELW62885.1| Cytoplasmic tRNA 2-thiolation protein 2 [Tupaia chinensis]
Length = 536
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
++ P +KVL+A+SG SS +++ + EG+ S KR+ F IY+D+G++
Sbjct: 57 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSRDSAKRLRFVPGVIYVDEGAV 107
>gi|194388910|dbj|BAG61472.1| unnamed protein product [Homo sapiens]
Length = 213
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|119587179|gb|EAW66775.1| hypothetical protein LOC348180, isoform 1, isoform CRA_a [Homo
sapiens]
Length = 221
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 43 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 102
Query: 61 PNFGSVCP 68
V P
Sbjct: 103 KTLAEVKP 110
>gi|51593374|gb|AAH80540.1| C16orf84 protein [Homo sapiens]
Length = 507
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 60 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 119
Query: 61 PNFGSVCP 68
V P
Sbjct: 120 KTLAEVKP 127
>gi|328724233|ref|XP_001952568.2| PREDICTED: hypothetical protein LOC100161816 [Acyrthosiphon pisum]
Length = 1181
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
M+R D+++V SG S++LLH L + +S K I F++ A +D GS
Sbjct: 933 MIRDGDRIMVCLSGGKDSLSLLHTLHQYQYYASSKGIHFTLGAATVDPGS 982
>gi|61676106|ref|NP_001012777.1| cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Homo sapiens]
gi|121941955|sp|Q2VPK5.1|CTU2_HUMAN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|83318442|gb|AAI08660.1| Chromosome 16 open reading frame 84 [Homo sapiens]
gi|115940699|gb|AAI25270.1| Chromosome 16 open reading frame 84 [Homo sapiens]
gi|187957358|gb|AAI57882.1| Chromosome 16 open reading frame 84 [Homo sapiens]
Length = 515
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|410217278|gb|JAA05858.1| cytosolic thiouridylase subunit 2 homolog [Pan troglodytes]
gi|410266886|gb|JAA21409.1| cytosolic thiouridylase subunit 2 homolog [Pan troglodytes]
gi|410296192|gb|JAA26696.1| cytosolic thiouridylase subunit 2 homolog [Pan troglodytes]
Length = 515
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|114664097|ref|XP_001137658.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 2 [Pan
troglodytes]
Length = 515
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|61676108|ref|NP_001012780.1| cytoplasmic tRNA 2-thiolation protein 2 isoform 2 [Homo sapiens]
Length = 485
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|390478022|ref|XP_003735400.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 2 [Callithrix jacchus]
Length = 510
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I+ID+G+ S +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVRQVLEGLSQDSAKRLRFVPGVIFIDEGAACGRSPEERA 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|114664099|ref|XP_001137499.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Pan
troglodytes]
Length = 485
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|426383212|ref|XP_004058181.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 1
[Gorilla gorilla gorilla]
Length = 515
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|410984167|ref|XP_003998402.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Felis catus]
Length = 587
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F IY+D+G+
Sbjct: 147 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSRDSAKRLRFVPGVIYVDEGA 196
>gi|348535101|ref|XP_003455040.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like
[Oreochromis niloticus]
Length = 508
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
P +KVL+A SG SS ++L +QEG+ ++K++ F YID+G+
Sbjct: 67 PGEKVLLAVSGGPSSCSMLRQVQEGLSQKANKKLRFVPGIAYIDEGA 113
>gi|344292782|ref|XP_003418104.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Loxodonta
africana]
Length = 523
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS ++L + EG+ S K++ F +Y+D+G+
Sbjct: 73 LIFPGEKVLLAWSGGPSSSSMLRQVLEGLSRESAKQLRFVPGVVYVDEGA 122
>gi|426383214|ref|XP_004058182.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 485
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|397468260|ref|XP_003805811.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Pan
paniscus]
Length = 454
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 7 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 66
Query: 61 PNFGSVCP 68
V P
Sbjct: 67 KTLAEVKP 74
>gi|332265766|ref|XP_003281886.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 2 [Nomascus leucogenys]
Length = 496
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 59 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 118
Query: 61 PNFGSVCP 68
V P
Sbjct: 119 KTLAEVKP 126
>gi|296478014|tpg|DAA20129.1| TPA: cytoplasmic tRNA 2-thiolation protein 2 [Bos taurus]
Length = 501
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F +YID+G+
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSRDSAKRLRFVPGVVYIDEGA 117
>gi|78369368|ref|NP_001030521.1| cytoplasmic tRNA 2-thiolation protein 2 [Bos taurus]
gi|122140220|sp|Q3SZG9.1|CTU2_BOVIN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|74354149|gb|AAI02863.1| Hypothetical protein LOC614194 [Bos taurus]
Length = 501
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F +YID+G+
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSRDSAKRLRFVPGVVYIDEGA 117
>gi|426242288|ref|XP_004015006.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Ovis aries]
Length = 492
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F IY+D+G+
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSRDSAKRLRFVPGVIYVDEGA 117
>gi|268573102|ref|XP_002641528.1| Hypothetical protein CBG09825 [Caenorhabditis briggsae]
Length = 657
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR-ILFSVCAIYIDDGS 50
M+R DKVLV SG S++LLH+L+ Q + R F + AI +D GS
Sbjct: 419 MIRNGDKVLVCLSGGKDSLSLLHILRHYQQRCNKARSTSFQLGAITVDPGS 469
>gi|355681752|gb|AER96824.1| cytoplasmic tRNA 2-thiolation protein 2 [Mustela putorius furo]
Length = 224
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F +Y+D+G+
Sbjct: 42 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSRDSAKRLRFVPGVVYVDEGA 91
>gi|354465342|ref|XP_003495139.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Cricetulus
griseus]
Length = 537
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F IY+D+G+
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQGSAKRLRFVPGVIYVDEGA 117
>gi|348550284|ref|XP_003460962.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Cavia
porcellus]
Length = 522
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F IY+D+G+
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQHSAKRLRFVPGVIYVDEGA 117
>gi|193211090|ref|NP_497589.3| Protein Y71H2B.5 [Caenorhabditis elegans]
gi|351064123|emb|CCD72410.1| Protein Y71H2B.5 [Caenorhabditis elegans]
Length = 957
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR-ILFSVCAIYIDDGS 50
M+R DKVLV SG S++LLH+L+ Q + R F + AI +D GS
Sbjct: 715 MIRDGDKVLVCLSGGKDSLSLLHILRHYQQRCNKARSTSFELGAITVDPGS 765
>gi|341877670|gb|EGT33605.1| hypothetical protein CAEBREN_23487 [Caenorhabditis brenneri]
Length = 966
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR-ILFSVCAIYIDDGS 50
M+R DKVLV SG S++LLH+L+ Q + R F + AI +D GS
Sbjct: 725 MIRNGDKVLVCLSGGKDSLSLLHILRHYQQRCNKARSTSFELGAITVDPGS 775
>gi|432104873|gb|ELK31385.1| Cytoplasmic tRNA 2-thiolation protein 2 [Myotis davidii]
Length = 517
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F +Y+D+G+
Sbjct: 27 LIFPGEKVLLAWSGGPSSSSMIWQVLEGLSRDSAKRLRFVPGVVYVDEGA 76
>gi|417411334|gb|JAA52107.1| Putative cytoplasmic trna 2-thiolation protein 2, partial [Desmodus
rotundus]
Length = 516
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F +Y+D+G+
Sbjct: 65 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSRDSAKRLRFVPGVVYVDEGA 114
>gi|351712933|gb|EHB15852.1| Cytoplasmic tRNA 2-thiolation protein 2 [Heterocephalus glaber]
Length = 522
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F +Y+D+G+
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPGVVYVDEGA 117
>gi|432950093|ref|XP_004084384.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Oryzias
latipes]
Length = 486
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49
++ P +KVL+A SG SS A+L +Q+G+ S+ K++ F ++ID+G
Sbjct: 64 LIFPGEKVLLAVSGGPSSSAMLSQVQQGLGQSAQKKLRFLPGLVHIDEG 112
>gi|73956828|ref|XP_850047.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 3 [Canis
lupus familiaris]
Length = 509
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F +Y+D+G+
Sbjct: 67 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSRDSAKRLRFVPGVVYVDEGA 116
>gi|357623995|gb|EHJ74923.1| putative Y71H2B.5 [Danaus plexippus]
Length = 1088
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48
M+R DK+LV SGS S+ALLH + + + K I FS+ + I+D
Sbjct: 845 MVRAGDKILVCLSGSRESVALLHTMHQYQFYARSKGIHFSIASRAIED 892
>gi|301755140|ref|XP_002913441.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Ailuropoda
melanoleuca]
Length = 532
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F +Y+D+G+
Sbjct: 67 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLGRDSAKRLRFVPGVVYVDEGA 116
>gi|260833476|ref|XP_002611683.1| hypothetical protein BRAFLDRAFT_63633 [Branchiostoma floridae]
gi|229297054|gb|EEN67693.1| hypothetical protein BRAFLDRAFT_63633 [Branchiostoma floridae]
Length = 1156
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSIS 52
M+R D+VL+ SG S++LLH L++ + K I F + A+ +D + S
Sbjct: 925 MIRDGDRVLLCLSGGKDSLSLLHTLRQYQFFAKSKNITFELGAVTVDPQTAS 976
>gi|189236796|ref|XP_969974.2| PREDICTED: similar to Y71H2B.5 [Tribolium castaneum]
gi|270006241|gb|EFA02689.1| hypothetical protein TcasGA2_TC008410 [Tribolium castaneum]
Length = 1280
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47
M++ D V+V SG S++LLH L + + +K ILFS+ A+ +D
Sbjct: 1021 MIKDGDNVMVCLSGGKDSLSLLHTLLQFQNYAQNKGILFSLGAVTVD 1067
>gi|321475210|gb|EFX86173.1| hypothetical protein DAPPUDRAFT_308415 [Daphnia pulex]
Length = 470
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 2 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI--LFSVCAIYIDDGSISQVSK 56
++ + VL+A+SG SS +++ L++EG+ S K+I +F ++ID+G I +SK
Sbjct: 69 LKHNEHVLLAYSGGLSSGSMVKLIKEGLDFSESKKIKMVFKPTLVHIDEGLILNLSK 125
>gi|167518011|ref|XP_001743346.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778445|gb|EDQ92060.1| predicted protein [Monosiga brevicollis MX1]
Length = 706
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 35/58 (60%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSK 58
M+R +++ +AFSG + S ALL +++ M H+++ I+IDDG + ++++
Sbjct: 78 MIRQFERIALAFSGGNRSTALLGIIRRHMTKGEHRQLRIVPTVIHIDDGCLFGATQAE 135
>gi|380812454|gb|AFE78101.1| cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Macaca mulatta]
gi|383418073|gb|AFH32250.1| cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Macaca mulatta]
gi|384946858|gb|AFI37034.1| cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Macaca mulatta]
Length = 514
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPGVIFVDEGAAFGKSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|403261049|ref|XP_003922948.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Saimiri
boliviensis boliviensis]
Length = 588
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S +
Sbjct: 125 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPGVIFVDEGAACGRSPEERA 184
Query: 61 PNFGSVCP 68
V P
Sbjct: 185 KTLAEVKP 192
>gi|402909286|ref|XP_003917353.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Papio
anubis]
Length = 515
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPGVIFVDEGAAFGKSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|395856941|ref|XP_003800875.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 2 [Otolemur garnettii]
Length = 524
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPGVIFVDEGA 117
>gi|350411108|ref|XP_003489243.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Bombus
impatiens]
Length = 491
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 2 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
+ P D +LVA SG +S ALLHL+ K++ S +YIDDG +
Sbjct: 85 IHPNDSILVAHSGKANSTALLHLIMIDTNELISKKLRPSFKVLYIDDGMV 134
>gi|119587181|gb|EAW66777.1| hypothetical protein LOC348180, isoform 1, isoform CRA_c [Homo
sapiens]
Length = 183
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48
P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+
Sbjct: 71 PGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDE 115
>gi|402909288|ref|XP_003917354.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 2 [Papio
anubis]
Length = 485
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPGVIFVDEGAAFGKSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|313887829|ref|ZP_07821509.1| PP-loop family protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846172|gb|EFR33553.1| PP-loop family protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 272
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQ 53
M+ P DK+ VA SG S+ L LLQE L H ++ F + I +D G + +
Sbjct: 35 MISPGDKIAVAISGGKDSLTLAKLLQE---LKKHNKVPFELEFIAMDPGYLPE 84
>gi|297284659|ref|XP_002802637.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Macaca
mulatta]
Length = 453
Score = 37.4 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 7 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPGVIFVDEGAAFGKSLEERS 66
Query: 61 PNFGSVCP 68
V P
Sbjct: 67 KTLAEVKP 74
>gi|308502159|ref|XP_003113264.1| hypothetical protein CRE_25488 [Caenorhabditis remanei]
gi|308265565|gb|EFP09518.1| hypothetical protein CRE_25488 [Caenorhabditis remanei]
Length = 985
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQE-GMQLSSHKRILFSVCAIYIDDGS 50
M+R DKVLV SG S++LLH+L+ ++ + + F + AI +D GS
Sbjct: 744 MIRNGDKVLVCLSGGKDSLSLLHILRHYQLRCNKARSTSFELGAITVDPGS 794
>gi|198424860|ref|XP_002119654.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 983
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
M++ +DKVLV SG S+++LH+L + + I F + A+ ID +N
Sbjct: 740 MIKDKDKVLVCLSGGKDSLSMLHVLHQYQYQAGSNNIHFELGAVTID----------PMN 789
Query: 61 PNF--GSVCPY 69
P+F + PY
Sbjct: 790 PSFDPSPLIPY 800
>gi|390350266|ref|XP_795634.3| PREDICTED: uncharacterized protein LOC590956 [Strongylocentrotus
purpuratus]
Length = 1177
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47
M+R D+VLV SG S++LLH L++ + K I F + A+ +D
Sbjct: 935 MLRDGDRVLVCLSGGKDSLSLLHCLRQYQFAAKKKGITFDLGAVTVD 981
>gi|443716722|gb|ELU08113.1| hypothetical protein CAPTEDRAFT_90010, partial [Capitella teleta]
Length = 809
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
M++ D+VLV SG S++LLH +++ + K I F + A+ +D + S S L
Sbjct: 564 MLKDGDRVLVCLSGGKDSLSLLHTIRQYQFYAKSKGIKFDLGAVTVDPQT-SAYDPSPLK 622
Query: 61 PNFGSV-CPY 69
P S+ PY
Sbjct: 623 PYLASLGIPY 632
>gi|374307419|ref|YP_005053850.1| tRNA(Ile)-lysidine synthase [Filifactor alocis ATCC 35896]
gi|291166567|gb|EFE28613.1| tRNA(Ile)-lysidine synthase [Filifactor alocis ATCC 35896]
Length = 466
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQE 27
+++P++KV+VAFSG S+ LLHLL E
Sbjct: 16 LIQPKEKVIVAFSGGPDSVCLLHLLHE 42
>gi|356504783|ref|XP_003521174.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Glycine
max]
Length = 458
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 1 MMRPQDKVLVAFSGSHSS---MALLHLLQEGMQL---SSHKRIL--FSVCAIYIDDGSI 51
M+ P DKVLVAFSG SS + +H +QE Q +S R L F V ++ID+ ++
Sbjct: 81 MITPTDKVLVAFSGGPSSRVALQFVHDMQERAQRNFDASRDRSLPVFGVGVVFIDESAV 139
>gi|321467456|gb|EFX78446.1| hypothetical protein DAPPUDRAFT_105239 [Daphnia pulex]
Length = 679
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
M+ D+VL+ SG S++LLH L++ + S I F + AI +D GS S + ++
Sbjct: 436 MISNGDRVLICVSGGKDSLSLLHTLRQYQKQSKGFGISFDIGAITVDPGSSSLAFLTSMS 495
Query: 61 PN 62
N
Sbjct: 496 GN 497
>gi|291227129|ref|XP_002733541.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 1090
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47
M+ DKVLV SG S++LLH L++ +S K I +S+ A+ +D
Sbjct: 848 MIENGDKVLVCLSGGKDSLSLLHTLRQYQFYASKKGIDYSLGAVTVD 894
>gi|149194409|ref|ZP_01871506.1| hypothetical protein CMTB2_07406 [Caminibacter mediatlanticus
TB-2]
gi|149135584|gb|EDM24063.1| hypothetical protein CMTB2_07406 [Caminibacter mediatlanticus
TB-2]
Length = 262
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
+++ DKVL+A SG S LLH+L+ MQL + + F + AI ID G+
Sbjct: 30 LIKENDKVLIALSGGKDSFVLLHVLKR-MQLIAPFK--FDLAAITIDAGT 76
>gi|300814739|ref|ZP_07094987.1| PP-loop family protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511126|gb|EFK38378.1| PP-loop family protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 276
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKL 59
+++ DK+ VA SG S+ L L+QE L H+++ FS+ I +D G I + S + L
Sbjct: 38 LIQDGDKIAVAISGGKDSLTLAKLMQE---LKKHRQVDFSLEFIAMDPGYIKENSDNLL 93
>gi|403362663|gb|EJY81062.1| DUF2392 domain containing protein [Oxytricha trifallax]
Length = 583
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51
D L+ SG +SMALL L+ + + +S +++ F V Y+D+G +
Sbjct: 160 DLNLICISGGSNSMALLDLMHQSLFGTSQRKMFFRVHIFYVDEGRV 205
>gi|399925204|ref|ZP_10782562.1| PP-loop family protein [Peptoniphilus rhinitidis 1-13]
Length = 272
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQ 53
++ P DK+ VA SG S+ L LLQE L H ++ F + I +D G + +
Sbjct: 35 LISPGDKIAVAISGGKDSLTLAKLLQE---LKKHNKVPFELEFITMDPGYLPE 84
>gi|126644499|ref|XP_001388098.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117326|gb|EAZ51426.1| hypothetical protein cgd3_1020 [Cryptosporidium parvum Iowa II]
Length = 1105
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
M+R DKVLVA SG S+ +LH+L + L + F V A +D + S++ SKL
Sbjct: 845 MIREGDKVLVAVSGGKDSLTMLHIL---LFLQRVAPVKFEVSAATVDPQT-SEMDASKLI 900
Query: 61 PNFGSV 66
P S+
Sbjct: 901 PYMESL 906
>gi|224087018|ref|XP_002308030.1| predicted protein [Populus trichocarpa]
gi|222854006|gb|EEE91553.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLL-------QEGMQLSSHKRI-LFSVCAIYIDDGSIS 52
M+ P D VLVAFSG SS L + Q+ + S K + +F V +ID+ ++
Sbjct: 82 MISPSDNVLVAFSGGPSSRVALQFVHGLQDRAQKNFEASKDKSLPVFGVGVAFIDESAVY 141
Query: 53 QVSKSKLN 60
VS K++
Sbjct: 142 PVSSDKVD 149
>gi|282881884|ref|ZP_06290535.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Peptoniphilus
lacrimalis 315-B]
gi|281298293|gb|EFA90738.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Peptoniphilus
lacrimalis 315-B]
Length = 277
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKL 59
+++ DK+ VA SG S+ L L+QE L H+++ FS+ I +D G I + S + L
Sbjct: 39 LIQDGDKIAVAISGGKDSLTLAKLMQE---LKRHRQVDFSLEFIAMDPGYIKENSDNLL 94
>gi|261856657|ref|YP_003263940.1| PP-loop domain-containing protein [Halothiobacillus neapolitanus
c2]
gi|261837126|gb|ACX96893.1| PP-loop domain protein [Halothiobacillus neapolitanus c2]
Length = 280
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47
M+RP D++L+ SG S++LLH L+ + I F + AI +D
Sbjct: 41 MIRPGDRILIGLSGGKDSLSLLHCLR---HVQRRAPISFELAAITVD 84
>gi|119587184|gb|EAW66780.1| hypothetical protein LOC348180, isoform 1, isoform CRA_f [Homo
sapiens]
Length = 122
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47
P +KVL+A+SG SS +++ + EG+ S KR+ F I++D
Sbjct: 71 PGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVD 114
>gi|312376122|gb|EFR23307.1| hypothetical protein AND_13125 [Anopheles darlingi]
Length = 449
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR 36
Q++VL F+ SHS AL+H + EG++L S R
Sbjct: 119 QERVLAKFNSSHSQQALVHSINEGIKLQSQNR 150
>gi|147852315|emb|CAN82223.1| hypothetical protein VITISV_011871 [Vitis vinifera]
Length = 747
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI---------LFSVCAIYIDDGSI 51
M+ P D VLVAFSG SS L + E MQ + K +F V ++D+ ++
Sbjct: 93 MISPTDNVLVAFSGGPSSRVALQFVHE-MQHKAQKNFDASRDRSLPVFGVGVAFVDESAV 151
Query: 52 SQVSKSKLN 60
S++ + +
Sbjct: 152 SRIPSDEFD 160
>gi|397468264|ref|XP_003805813.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 3 [Pan
paniscus]
Length = 525
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48
++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+
Sbjct: 7 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDE 54
>gi|323455513|gb|EGB11381.1| hypothetical protein AURANDRAFT_4656, partial [Aureococcus
anophagefferens]
Length = 261
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47
M+ KVLVA SG S ALL+LL++ Q + I F V A+++D
Sbjct: 24 MIEDGAKVLVACSGGKDSNALLYLLKQAQQRRLFRGIDFDVVAVHLD 70
>gi|118793629|ref|XP_320974.3| AGAP002073-PA [Anopheles gambiae str. PEST]
gi|116115902|gb|EAA01047.3| AGAP002073-PA [Anopheles gambiae str. PEST]
Length = 423
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR 36
Q++VL F+ SHS AL+H + EG++L S R
Sbjct: 119 QERVLAKFNQSHSQQALVHSINEGIKLQSQNR 150
>gi|281339938|gb|EFB15522.1| hypothetical protein PANDA_001215 [Ailuropoda melanoleuca]
Length = 544
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI--SQVSKSK 58
++ P +KVL+A+SG SS +++ + EG+ S KR+ F +Y+D + S+
Sbjct: 22 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLGRDSAKRLRFVPGVVYVDGSQVGLGHCGPSR 81
Query: 59 LNP 61
L P
Sbjct: 82 LPP 84
>gi|194208895|ref|XP_001488200.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Equus caballus]
Length = 520
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVS 55
++ P +KVL+A+SG SS +++ + EG+ S KR+ F + ID+G+ +S
Sbjct: 67 LIFPGEKVLLAWSGGPSSSSMVWQVLEGLSRESAKRLRFVPGIVCIDEGAACGLS 121
>gi|301057224|ref|ZP_07198353.1| PP-loop family protein [delta proteobacterium NaphS2]
gi|300448675|gb|EFK12311.1| PP-loop family protein [delta proteobacterium NaphS2]
Length = 266
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 7/51 (13%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFS--VCAIYIDDG 49
M+R D VLVA SG S+ALL +L+E + KRI S + A+++D G
Sbjct: 21 MIRDGDHVLVAISGGKDSLALLWILRERL-----KRIPISYQITAVHVDPG 66
>gi|157167823|ref|XP_001655936.1| ring finger protein [Aedes aegypti]
gi|108871414|gb|EAT35639.1| AAEL012209-PA [Aedes aegypti]
Length = 395
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR 36
Q++VL F+ SHS AL+H + EG++L S R
Sbjct: 119 QERVLAKFNQSHSQQALVHSINEGIKLQSQNR 150
>gi|260893554|ref|YP_003239651.1| PP-loop domain-containing protein [Ammonifex degensii KC4]
gi|260865695|gb|ACX52801.1| PP-loop domain protein [Ammonifex degensii KC4]
Length = 244
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49
M+ P DK+ V SG S+ALL +L L + + FS+ AI ID G
Sbjct: 13 MIAPGDKIAVGVSGGKDSVALLRILA---HLRDYSHLSFSMVAIMIDPG 58
>gi|170047129|ref|XP_001851087.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
gi|167869650|gb|EDS33033.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
Length = 418
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR 36
Q++VL F+ SHS AL+H + EG++L S R
Sbjct: 119 QERVLAKFNQSHSQQALVHSINEGIKLQSQNR 150
>gi|225441840|ref|XP_002278289.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Vitis vinifera]
gi|297739656|emb|CBI29838.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI---------LFSVCAIYIDDGSI 51
M+ P D VLVAFSG SS L + E MQ + K +F V ++D+ ++
Sbjct: 93 MISPTDNVLVAFSGGPSSRVALQFVHE-MQHKAQKNFDASRDRSLPVFGVGVAFVDESAV 151
Query: 52 SQVSKSKLN 60
S++ + +
Sbjct: 152 SRIPSDEFD 160
>gi|358339415|dbj|GAA47483.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Clonorchis sinensis]
Length = 906
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQE------GMQLSS----HKRILFSVCAIYIDDGS 50
M+ P D+VLV SG S++LLH L + G +LSS +F + A+ +D G+
Sbjct: 706 MIHPGDRVLVCLSGGKDSLSLLHCLHQYQCMLRGCRLSSPGGLSPSAIFDLGAVTVDPGT 765
Query: 51 IS 52
S
Sbjct: 766 PS 767
>gi|395748215|ref|XP_003778729.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 2 [Pongo abelii]
Length = 517
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
MM +VL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S + +
Sbjct: 68 MMFFLPQVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERS 127
Query: 61 PNFGSVCP 68
V P
Sbjct: 128 KTLAEVKP 135
>gi|319936857|ref|ZP_08011269.1| PP-loop family protein [Coprobacillus sp. 29_1]
gi|319808125|gb|EFW04697.1| PP-loop family protein [Coprobacillus sp. 29_1]
Length = 279
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN 60
M++P DK+ V SG SM + LLQE L H + F + + +D G ++ ++ K+
Sbjct: 32 MIQPNDKIAVCISGGKDSMLMAKLLQE---LKRHGKFDFELVFLSMDPG-YNEKNRKKIE 87
Query: 61 PN 62
N
Sbjct: 88 EN 89
>gi|356570474|ref|XP_003553411.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 2-like, partial [Glycine max]
Length = 389
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 1 MMRPQDKVLVAFSGSHSS---MALLHLLQEGMQL---SSHKRIL--FSVCAIYIDDGSI 51
M+ P DKVLVAFSG SS + +H +QE Q +S R L F V ++I++ ++
Sbjct: 31 MISPTDKVLVAFSGGPSSRVALQFVHDMQERAQRNFDASRDRSLPVFGVGVVFINESTV 89
>gi|326437533|gb|EGD83103.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Salpingoeca sp. ATCC
50818]
Length = 1135
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
M+R D+VLV SG S+ LLH +++ + + + F + A +D G+
Sbjct: 879 MIRDGDRVLVCVSGGKDSLTLLHTMKQAQYVFRAQGVRFELGAATVDPGT 928
>gi|313894633|ref|ZP_07828196.1| tRNA(Ile)-lysidine synthetase [Veillonella sp. oral taxon 158
str. F0412]
gi|313440823|gb|EFR59252.1| tRNA(Ile)-lysidine synthetase [Veillonella sp. oral taxon 158
str. F0412]
Length = 332
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKL 59
++L+A SG SMALLHLLQ+ +++H+ + + I I D SI SK ++
Sbjct: 23 HSRILIACSGGPDSMALLHLLQD---IAAHRHTKYKL-GIAIVDHSIRPESKDEV 73
>gi|196011850|ref|XP_002115788.1| hypothetical protein TRIADDRAFT_59846 [Trichoplax adhaerens]
gi|190581564|gb|EDV21640.1| hypothetical protein TRIADDRAFT_59846 [Trichoplax adhaerens]
Length = 882
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50
M+ DK+LV SG S++LLH L++ + K I F + A ID S
Sbjct: 644 MIAQNDKILVCISGGKDSLSLLHTLKQYQFYARAKGIHFDIGATTIDPQS 693
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 944,219,018
Number of Sequences: 23463169
Number of extensions: 24699213
Number of successful extensions: 54205
Number of sequences better than 100.0: 132
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 54094
Number of HSP's gapped (non-prelim): 132
length of query: 70
length of database: 8,064,228,071
effective HSP length: 42
effective length of query: 28
effective length of database: 7,078,774,973
effective search space: 198205699244
effective search space used: 198205699244
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)