Query psy3866
Match_columns 70
No_of_seqs 120 out of 1160
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 19:26:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3866.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3866hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wy5_A TILS, hypothetical UPF0 99.4 6E-13 2E-17 92.8 5.5 46 1-51 20-66 (317)
2 3a2k_A TRNA(Ile)-lysidine synt 99.4 4E-13 1.4E-17 98.1 4.4 46 1-51 14-59 (464)
3 1ni5_A Putative cell cycle pro 99.4 4.9E-13 1.7E-17 97.0 4.7 50 1-56 9-59 (433)
4 1sur_A PAPS reductase; assimil 99.2 1.3E-11 4.4E-16 81.4 4.4 38 5-51 44-81 (215)
5 3k32_A Uncharacterized protein 99.0 5.9E-10 2E-14 73.5 5.4 37 6-51 7-43 (203)
6 2dpl_A GMP synthetase, GMP syn 99.0 5.5E-10 1.9E-14 78.0 4.9 40 5-52 20-59 (308)
7 3bl5_A Queuosine biosynthesis 99.0 9.9E-10 3.4E-14 71.4 5.4 38 5-51 3-40 (219)
8 1k92_A Argininosuccinate synth 98.9 1.5E-09 5E-14 80.3 6.4 40 2-50 7-46 (455)
9 2o8v_A Phosphoadenosine phosph 98.9 5.4E-10 1.8E-14 75.9 3.4 38 5-51 45-82 (252)
10 1zun_A Sulfate adenylyltransfe 98.9 6.7E-10 2.3E-14 78.4 3.6 43 4-51 45-87 (325)
11 3tqi_A GMP synthase [glutamine 98.9 1.1E-09 3.9E-14 81.2 3.9 39 5-51 230-268 (527)
12 2oq2_A Phosphoadenosine phosph 98.9 2.1E-09 7.1E-14 73.4 4.6 41 5-51 41-81 (261)
13 2pg3_A Queuosine biosynthesis 98.8 3.4E-09 1.1E-13 70.3 5.2 37 6-51 3-39 (232)
14 2der_A TRNA-specific 2-thiouri 98.8 2.8E-09 9.6E-14 76.7 4.6 39 3-50 15-53 (380)
15 1kor_A Argininosuccinate synth 98.8 3.3E-09 1.1E-13 76.8 4.9 37 6-50 1-37 (400)
16 2hma_A Probable tRNA (5-methyl 98.8 4.4E-09 1.5E-13 75.4 5.4 38 4-50 8-45 (376)
17 2ywb_A GMP synthase [glutamine 98.8 5E-09 1.7E-13 77.2 5.7 39 5-52 209-247 (503)
18 2c5s_A THII, probable thiamine 98.8 7E-09 2.4E-13 74.9 5.8 39 2-49 184-222 (413)
19 2wsi_A FAD synthetase; transfe 98.7 8.5E-09 2.9E-13 72.1 4.2 46 5-50 53-111 (306)
20 2nz2_A Argininosuccinate synth 98.7 1.4E-08 4.8E-13 73.9 5.5 38 4-50 4-41 (413)
21 3uow_A GMP synthetase; structu 98.7 1.4E-08 4.7E-13 76.0 4.4 40 4-51 254-293 (556)
22 3p52_A NH(3)-dependent NAD(+) 98.6 2.1E-08 7E-13 68.5 3.6 39 4-50 25-63 (249)
23 2goy_A Adenosine phosphosulfat 98.6 6.8E-09 2.3E-13 71.2 1.2 37 5-51 54-90 (275)
24 1gpm_A GMP synthetase, XMP ami 98.6 3.6E-08 1.2E-12 73.0 5.1 39 5-51 227-265 (525)
25 2e18_A NH(3)-dependent NAD(+) 98.6 2.6E-08 8.8E-13 67.3 3.8 38 5-50 22-60 (257)
26 2vxo_A GMP synthase [glutamine 98.6 9E-08 3.1E-12 73.5 5.9 40 5-52 240-280 (697)
27 1vl2_A Argininosuccinate synth 98.5 1.1E-07 3.8E-12 69.8 5.9 37 5-50 14-50 (421)
28 1xng_A NH(3)-dependent NAD(+) 98.5 5.9E-08 2E-12 66.0 3.9 39 4-50 24-62 (268)
29 3fiu_A NH(3)-dependent NAD(+) 98.3 6.9E-07 2.4E-11 60.8 5.2 38 4-50 28-65 (249)
30 3fwk_A FMN adenylyltransferase 98.3 5E-07 1.7E-11 64.1 4.6 46 6-51 59-117 (308)
31 3rjz_A N-type ATP pyrophosphat 98.1 3.3E-06 1.1E-10 57.8 5.1 35 6-49 5-39 (237)
32 1wxi_A NH(3)-dependent NAD(+) 97.9 1E-05 3.4E-10 55.8 4.4 45 5-50 40-87 (275)
33 1kqp_A NAD+ synthase, NH(3)-de 97.9 9.4E-06 3.2E-10 55.6 3.5 44 5-49 38-82 (271)
34 3n05_A NH(3)-dependent NAD(+) 97.9 1.1E-05 3.8E-10 60.2 4.0 38 5-50 326-364 (590)
35 1vbk_A Hypothetical protein PH 97.8 3.7E-05 1.3E-09 53.7 5.5 37 3-49 177-213 (307)
36 3q4g_A NH(3)-dependent NAD(+) 97.8 2E-05 6.9E-10 54.8 3.8 45 5-50 40-87 (279)
37 3dpi_A NAD+ synthetase; ssgcid 97.5 0.00017 5.8E-09 50.4 5.4 44 5-49 46-90 (285)
38 3sdb_A Glutamine-dependent NAD 97.4 0.00012 4E-09 56.0 4.1 41 5-50 361-404 (680)
39 3ilv_A Glutamine-dependent NAD 97.1 0.00033 1.1E-08 52.9 3.6 23 4-26 302-324 (634)
40 1q15_A CARA; CMPR, (2S,5S)-5-c 96.6 0.0023 7.8E-08 47.1 4.3 35 4-47 237-271 (503)
41 1jgt_A Beta-lactam synthetase; 96.2 0.0027 9.4E-08 46.8 3.1 24 4-27 240-263 (513)
42 1ct9_A Asparagine synthetase B 96.0 0.0048 1.7E-07 45.9 3.6 24 4-27 225-248 (553)
43 4f4h_A Glutamine dependent NAD 94.9 0.024 8.3E-07 42.3 4.0 38 4-48 299-336 (565)
44 2dum_A Hypothetical protein PH 94.6 0.11 3.9E-06 31.4 5.8 44 1-49 1-44 (170)
45 1mjh_A Protein (ATP-binding do 94.5 0.13 4.6E-06 30.7 6.0 40 4-48 4-43 (162)
46 3idf_A USP-like protein; unive 92.8 0.32 1.1E-05 28.2 5.4 41 6-50 2-42 (138)
47 2z08_A Universal stress protei 92.7 0.21 7.1E-06 29.1 4.5 39 6-49 3-41 (137)
48 1jmv_A USPA, universal stress 92.6 0.2 6.7E-06 29.2 4.3 39 5-48 2-40 (141)
49 3nbm_A PTS system, lactose-spe 92.6 0.23 7.7E-06 29.8 4.6 42 4-50 5-46 (108)
50 3hgm_A Universal stress protei 92.6 0.22 7.6E-06 29.0 4.5 39 6-49 3-41 (147)
51 3tnj_A Universal stress protei 92.2 0.3 1E-05 28.7 4.8 41 4-49 5-45 (150)
52 3s3t_A Nucleotide-binding prot 92.0 0.24 8.1E-06 28.9 4.1 40 5-49 5-44 (146)
53 3zqu_A Probable aromatic acid 91.6 0.4 1.4E-05 31.8 5.3 38 4-47 3-40 (209)
54 1q77_A Hypothetical protein AQ 91.6 0.33 1.1E-05 28.1 4.4 38 5-47 4-41 (138)
55 1e2b_A Enzyme IIB-cellobiose; 90.6 0.45 1.5E-05 28.1 4.4 40 6-50 4-43 (106)
56 1tq8_A Hypothetical protein RV 89.8 0.7 2.4E-05 28.1 4.9 39 3-47 15-55 (163)
57 2ejb_A Probable aromatic acid 88.9 0.88 3E-05 29.6 5.1 34 6-45 2-35 (189)
58 3fg9_A Protein of universal st 88.8 0.62 2.1E-05 27.6 4.0 41 4-49 14-56 (156)
59 3fdx_A Putative filament prote 88.1 0.32 1.1E-05 28.2 2.4 39 6-49 2-42 (143)
60 2k0z_A Uncharacterized protein 88.1 2 6.7E-05 24.6 5.8 55 3-69 54-108 (110)
61 3qjg_A Epidermin biosynthesis 87.7 0.89 3E-05 29.3 4.5 38 5-48 5-42 (175)
62 1p3y_1 MRSD protein; flavoprot 87.4 0.57 1.9E-05 30.7 3.4 36 5-46 8-43 (194)
63 1g63_A Epidermin modifying enz 87.3 0.72 2.4E-05 29.9 3.9 37 6-48 3-39 (181)
64 3dlo_A Universal stress protei 87.3 0.81 2.8E-05 27.6 4.0 40 5-49 24-64 (155)
65 3lqk_A Dipicolinate synthase s 87.3 0.63 2.2E-05 30.6 3.7 41 3-49 5-46 (201)
66 1qzu_A Hypothetical protein MD 87.0 0.67 2.3E-05 30.6 3.7 40 4-48 18-57 (206)
67 3loq_A Universal stress protei 86.2 1.2 4.2E-05 29.1 4.6 41 4-49 169-209 (294)
68 3cis_A Uncharacterized protein 86.1 1.2 4.2E-05 29.3 4.6 41 4-49 170-210 (309)
69 1sbz_A Probable aromatic acid 85.6 1.7 5.8E-05 28.5 5.1 35 7-46 2-36 (197)
70 1mvl_A PPC decarboxylase athal 85.6 1.3 4.5E-05 29.3 4.5 36 5-47 19-54 (209)
71 3mcu_A Dipicolinate synthase, 85.4 0.84 2.9E-05 30.3 3.5 41 3-49 3-44 (207)
72 3mt0_A Uncharacterized protein 84.8 2 6.9E-05 28.0 5.1 41 4-49 133-180 (290)
73 3ab8_A Putative uncharacterize 84.4 1.5 5.1E-05 28.1 4.3 41 4-49 153-193 (268)
74 2gm3_A Unknown protein; AT3G01 83.8 2.4 8.4E-05 25.4 4.9 41 4-48 4-55 (175)
75 3cis_A Uncharacterized protein 82.2 1.8 6.3E-05 28.5 4.2 40 4-48 18-57 (309)
76 3ab8_A Putative uncharacterize 82.1 1.3 4.3E-05 28.4 3.3 38 6-48 1-38 (268)
77 3mt0_A Uncharacterized protein 78.9 1.5 5E-05 28.7 2.8 42 2-48 4-45 (290)
78 3czc_A RMPB; alpha/beta sandwi 77.6 5.9 0.0002 23.1 5.0 25 6-30 19-44 (110)
79 3lwd_A 6-phosphogluconolactona 75.5 2.9 0.0001 27.6 3.5 43 3-52 30-73 (226)
80 3loq_A Universal stress protei 73.7 1.5 5.3E-05 28.6 1.8 41 4-49 21-61 (294)
81 3olq_A Universal stress protei 72.8 6.2 0.00021 25.7 4.6 42 4-50 155-205 (319)
82 3nwp_A 6-phosphogluconolactona 70.0 2.4 8.2E-05 28.1 2.1 41 5-52 36-77 (233)
83 3foj_A Uncharacterized protein 69.4 6.1 0.00021 21.9 3.5 37 3-50 54-90 (100)
84 3olq_A Universal stress protei 69.1 3.2 0.00011 27.2 2.5 41 4-49 6-46 (319)
85 3eb9_A 6-phosphogluconolactona 67.8 6.5 0.00022 26.4 3.9 46 3-52 33-80 (266)
86 2l2q_A PTS system, cellobiose- 67.1 4 0.00014 23.7 2.4 37 6-47 5-41 (109)
87 1wv9_A Rhodanese homolog TT165 67.1 7.9 0.00027 21.2 3.6 34 6-50 54-87 (94)
88 3eme_A Rhodanese-like domain p 66.4 7.1 0.00024 21.7 3.4 37 3-50 54-90 (103)
89 1tvm_A PTS system, galactitol- 62.2 15 0.00052 21.4 4.4 38 6-48 22-60 (113)
90 1vkr_A Mannitol-specific PTS s 62.1 9.3 0.00032 23.0 3.5 39 4-47 12-52 (125)
91 3g5j_A Putative ATP/GTP bindin 61.9 3.9 0.00013 23.4 1.7 34 6-50 90-124 (134)
92 1dv5_A APO-DCP, APO-D-alanyl c 61.8 3 0.0001 22.7 1.1 23 14-41 34-56 (80)
93 3lhi_A Putative 6-phosphogluco 60.4 9.7 0.00033 25.0 3.6 40 5-51 33-73 (232)
94 1or5_A Acyl carrier protein; A 57.2 5.1 0.00017 21.5 1.5 24 13-41 35-58 (83)
95 3oc6_A 6-phosphogluconolactona 54.8 25 0.00085 23.2 4.9 43 5-52 38-81 (248)
96 3gk5_A Uncharacterized rhodane 54.0 11 0.00036 21.4 2.6 37 3-50 53-89 (108)
97 3tx2_A Probable 6-phosphogluco 53.4 25 0.00086 23.2 4.8 43 5-52 38-81 (251)
98 3hn6_A Glucosamine-6-phosphate 51.7 24 0.00083 24.0 4.6 43 5-50 53-96 (289)
99 3ico_A 6PGL, 6-phosphogluconol 50.2 33 0.0011 23.0 5.0 43 5-52 54-97 (268)
100 3nhv_A BH2092 protein; alpha-b 50.1 30 0.001 20.6 4.4 37 3-50 70-108 (144)
101 3flh_A Uncharacterized protein 49.3 16 0.00054 21.1 2.9 37 3-50 69-107 (124)
102 2cnr_A FAS, ACP, acyl carrier 49.3 7.4 0.00025 20.6 1.3 23 13-40 36-58 (82)
103 1tq1_A AT5G66040, senescence-a 48.0 18 0.00061 21.0 3.0 38 3-50 80-117 (129)
104 1f80_D Acyl carrier protein; t 47.3 8.9 0.0003 20.3 1.5 23 13-40 36-58 (81)
105 2fsx_A RV0390, COG0607: rhodan 47.0 23 0.0008 20.9 3.5 38 3-50 78-115 (148)
106 2l4b_A Acyl carrier protein; i 44.6 10 0.00035 20.6 1.5 24 13-41 40-63 (88)
107 3css_A 6-phosphogluconolactona 41.9 46 0.0016 22.0 4.7 46 3-52 34-80 (267)
108 3e15_A Glucose-6-phosphate 1-d 41.4 15 0.00053 25.5 2.3 45 3-51 57-102 (312)
109 1x3o_A Acyl carrier protein; s 41.3 9.1 0.00031 20.0 0.9 19 12-31 33-51 (80)
110 1vl1_A 6PGL, 6-phosphogluconol 41.3 34 0.0011 22.4 3.8 41 5-52 44-85 (232)
111 2amw_A Hypothetical protein NE 41.2 15 0.0005 19.7 1.8 23 14-41 34-57 (83)
112 2jtq_A Phage shock protein E; 41.2 40 0.0014 17.8 4.3 25 3-27 39-63 (85)
113 2lol_A ACP, acyl carrier prote 40.9 9.2 0.00032 20.2 0.9 18 13-31 35-52 (81)
114 2qnw_A Acyl carrier protein; m 40.8 9.4 0.00032 20.4 0.9 18 13-31 36-53 (82)
115 2ehs_A ACP, acyl carrier prote 40.6 8.9 0.0003 19.8 0.8 19 12-31 29-47 (77)
116 1l0i_A Acyl carrier protein; a 40.6 9.5 0.00033 20.0 0.9 18 13-31 32-49 (78)
117 2dnw_A Acyl carrier protein; A 40.5 13 0.00043 20.8 1.5 24 13-41 44-67 (99)
118 1af8_A Actinorhodin polyketide 40.4 6.2 0.00021 21.3 0.1 25 12-41 36-60 (86)
119 3gzm_A Acyl carrier protein; h 40.1 9.7 0.00033 20.3 0.9 18 13-31 34-51 (81)
120 1m4y_A ATP-dependent protease 39.8 30 0.001 21.1 3.3 25 5-29 39-64 (171)
121 2kr5_A PKS, aflatoxin biosynth 39.7 16 0.00056 19.5 1.8 23 13-40 39-61 (89)
122 2kw2_A Specialized acyl carrie 38.8 14 0.00048 20.9 1.5 23 13-40 32-54 (101)
123 1klp_A ACP, ACPM, meromycolate 38.5 17 0.00058 20.9 1.8 24 13-41 36-59 (115)
124 1vee_A Proline-rich protein fa 38.3 35 0.0012 19.8 3.3 37 4-50 73-109 (134)
125 3iwh_A Rhodanese-like domain p 37.2 56 0.0019 18.4 4.7 37 3-50 54-90 (103)
126 4dxe_H ACP, acyl carrier prote 36.4 16 0.00055 21.0 1.5 24 13-41 55-78 (101)
127 2kwl_A ACP, acyl carrier prote 36.0 10 0.00035 20.3 0.5 18 13-31 38-55 (84)
128 3hix_A ALR3790 protein; rhodan 35.1 59 0.002 18.0 3.9 38 3-50 50-87 (106)
129 3jx9_A Putative phosphoheptose 34.0 62 0.0021 20.4 4.1 41 2-49 75-116 (170)
130 2hhg_A Hypothetical protein RP 33.9 68 0.0023 18.3 4.1 38 3-50 84-121 (139)
131 2jq4_A AGR_C_4658P, hypothetic 33.4 14 0.00048 21.2 0.9 23 13-40 52-74 (105)
132 2ywr_A Phosphoribosylglycinami 33.1 95 0.0032 19.9 5.0 37 6-48 2-38 (216)
133 3o1l_A Formyltetrahydrofolate 32.7 1E+02 0.0034 21.2 5.3 40 4-49 104-143 (302)
134 2ju1_A Erythronolide synthase; 32.4 16 0.00056 19.7 1.0 23 13-40 49-71 (95)
135 1y89_A DEVB protein; structura 32.4 50 0.0017 21.3 3.6 45 5-52 28-73 (238)
136 1x92_A APC5045, phosphoheptose 31.7 54 0.0018 20.0 3.5 37 7-49 115-151 (199)
137 2xhz_A KDSD, YRBH, arabinose 5 31.5 60 0.0021 19.3 3.7 38 6-49 97-134 (183)
138 3ejb_A Acyl carrier protein; p 31.3 13 0.00043 21.0 0.4 24 13-41 51-74 (97)
139 3n0v_A Formyltetrahydrofolate 31.3 1.1E+02 0.0039 20.6 5.4 39 5-49 90-128 (286)
140 1vku_A Acyl carrier protein; T 31.3 16 0.00055 20.9 0.9 19 12-31 44-62 (100)
141 3sho_A Transcriptional regulat 31.1 61 0.0021 19.4 3.6 38 6-49 88-125 (187)
142 1nq4_A Oxytetracycline polyket 30.6 14 0.00048 20.7 0.5 22 14-40 37-58 (95)
143 2ava_A ACP I, acyl carrier pro 30.6 7.4 0.00025 20.7 -0.7 23 13-40 33-55 (82)
144 2yva_A DNAA initiator-associat 30.5 58 0.002 19.7 3.5 37 7-49 111-147 (196)
145 1m3s_A Hypothetical protein YC 30.5 59 0.002 19.5 3.5 36 7-48 81-116 (186)
146 3d1p_A Putative thiosulfate su 30.2 67 0.0023 18.4 3.6 25 3-27 89-113 (139)
147 3av3_A Phosphoribosylglycinami 30.1 91 0.0031 20.0 4.5 37 6-48 4-40 (212)
148 1qxn_A SUD, sulfide dehydrogen 29.8 74 0.0025 18.5 3.8 38 3-50 80-117 (137)
149 1tk9_A Phosphoheptose isomeras 29.2 64 0.0022 19.2 3.5 38 6-49 111-148 (188)
150 1g3k_A ATP-dependent protease 28.6 59 0.002 19.8 3.3 23 5-27 39-62 (174)
151 3g23_A Peptidase U61, LD-carbo 28.4 31 0.0011 23.3 2.1 22 3-27 95-116 (274)
152 3lou_A Formyltetrahydrofolate 28.1 1.4E+02 0.0048 20.3 5.4 39 5-49 95-133 (292)
153 1jeo_A MJ1247, hypothetical pr 28.0 72 0.0025 19.0 3.6 36 7-48 84-119 (180)
154 2p0y_A Hypothetical protein LP 27.3 55 0.0019 23.1 3.2 47 9-68 13-61 (341)
155 2liu_A CURA; holo state, trans 26.9 16 0.00053 19.8 0.3 18 13-31 49-66 (99)
156 2xbl_A Phosphoheptose isomeras 26.7 75 0.0026 19.1 3.5 40 3-49 115-154 (198)
157 2lte_A Specialized acyl carrie 32.6 14 0.00047 21.3 0.0 26 12-42 53-78 (103)
158 4h1h_A LMO1638 protein; MCCF-l 26.5 24 0.00082 24.2 1.2 22 3-27 104-125 (327)
159 1vim_A Hypothetical protein AF 26.2 57 0.002 20.2 2.9 37 7-49 91-127 (200)
160 3ilm_A ALR3790 protein; rhodan 26.2 96 0.0033 18.2 3.9 26 2-27 53-78 (141)
161 3i2v_A Adenylyltransferase and 25.7 75 0.0026 17.6 3.2 41 6-50 73-113 (127)
162 4e5s_A MCCFLIKE protein (BA_56 25.5 32 0.0011 23.8 1.7 22 3-27 104-125 (331)
163 1urh_A 3-mercaptopyruvate sulf 25.0 80 0.0027 20.3 3.6 38 3-50 228-265 (280)
164 2afd_A Protein ASL1650; twiste 24.8 13 0.00044 19.7 -0.4 18 13-31 42-59 (88)
165 2kjs_A Putative acyl carrier p 24.4 25 0.00087 19.6 0.9 17 14-31 32-48 (87)
166 2cgq_A Acyl carrier protein AC 23.8 26 0.00089 20.7 0.9 18 13-31 54-71 (113)
167 3ce7_A Specific mitochodrial a 23.7 27 0.00091 20.1 0.9 17 14-31 53-69 (107)
168 3auf_A Glycinamide ribonucleot 23.6 1.6E+02 0.0054 19.2 4.9 37 6-48 23-59 (229)
169 2z3b_A ATP-dependent protease 23.5 81 0.0028 19.4 3.2 25 5-29 45-70 (180)
170 3sr3_A Microcin immunity prote 23.4 27 0.00091 24.2 1.0 22 3-27 105-126 (336)
171 1fs5_A Glucosamine-6-phosphate 23.4 1.6E+02 0.0053 19.1 5.1 41 5-48 32-73 (266)
172 1jy2_P Fibrinogen gamma-B chai 23.1 15 0.00052 19.2 -0.2 11 59-69 11-21 (48)
173 2we8_A Xanthine dehydrogenase; 22.9 1.6E+02 0.0056 20.7 5.0 30 5-44 204-233 (386)
174 2lki_A Putative uncharacterize 22.7 30 0.001 19.9 1.0 22 14-40 56-78 (105)
175 3tg1_B Dual specificity protei 22.6 52 0.0018 19.6 2.1 35 5-50 93-136 (158)
176 1gmx_A GLPE protein; transfera 22.4 1.1E+02 0.0036 16.7 3.5 25 3-27 56-80 (108)
177 3cvj_A Putative phosphoheptose 22.2 75 0.0026 20.1 3.0 35 7-47 110-144 (243)
178 2i2w_A Phosphoheptose isomeras 21.9 77 0.0026 19.7 2.9 37 7-49 133-169 (212)
179 3pnx_A Putative sulfurtransfer 21.9 1.4E+02 0.0047 18.6 4.1 42 4-50 4-45 (160)
180 3ics_A Coenzyme A-disulfide re 20.4 94 0.0032 22.3 3.4 37 3-50 539-575 (588)
181 3etn_A Putative phosphosugar i 20.2 1.1E+02 0.0039 19.1 3.5 38 4-48 106-145 (220)
182 2l22_A Mupirocin didomain acyl 20.0 44 0.0015 20.9 1.5 18 13-31 54-71 (212)
No 1
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=99.37 E-value=6e-13 Score=92.75 Aligned_cols=46 Identities=22% Similarity=0.335 Sum_probs=40.2
Q ss_pred CCCCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCce-EEEEEEeCCCC
Q psy3866 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFS-VCAIYIDDGSI 51 (70)
Q Consensus 1 ~i~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~-~~~v~vd~~~~ 51 (70)
|+.++++|+||+|||+||++|++++.+ ++ ++++++ +.++|||||++
T Consensus 20 l~~~~~~vlva~SGG~DS~~Ll~ll~~-~~----~~~g~~~v~av~vd~g~r 66 (317)
T 1wy5_A 20 IFSGERRVLIAFSGGVDSVVLTDVLLK-LK----NYFSLKEVALAHFNHMLR 66 (317)
T ss_dssp SCSSCCEEEEECCSSHHHHHHHHHHHH-ST----TTTTCSEEEEEEEECCSS
T ss_pred CCCCCCEEEEEecchHHHHHHHHHHHH-HH----HHcCCCEEEEEEEECCCC
Confidence 467889999999999999999999998 32 356889 99999999984
No 2
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=99.36 E-value=4e-13 Score=98.10 Aligned_cols=46 Identities=26% Similarity=0.367 Sum_probs=40.8
Q ss_pred CCCCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 1 ~i~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
|+.++++|+||+|||+||++||+++.+ ++ ++.++++.++|||||++
T Consensus 14 l~~~~~~vlVa~SGG~DS~~Ll~ll~~-~~----~~~~~~v~avhvdhglr 59 (464)
T 3a2k_A 14 LLSEGAAVIVGVSGGPDSLALLHVFLS-LR----DEWKLQVIAAHVDHMFR 59 (464)
T ss_dssp SSSCSSBEEEECCSSHHHHHHHHHHHH-HH----HTTTCBCEEEEEECTTC
T ss_pred CCCCCCEEEEEEcCcHHHHHHHHHHHH-HH----HHcCCeEEEEEEECCCC
Confidence 578899999999999999999999998 43 34689999999999984
No 3
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=99.36 E-value=4.9e-13 Score=97.02 Aligned_cols=50 Identities=28% Similarity=0.347 Sum_probs=41.9
Q ss_pred CCCCCCeEEEEecCchhHHHHHHHHHHhhhhhhccc-CCceEEEEEEeCCCCCcCcc
Q psy3866 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR-ILFSVCAIYIDDGSISQVSK 56 (70)
Q Consensus 1 ~i~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~-~~~~~~~v~vd~~~~~~~~~ 56 (70)
++.++++|+||+|||+||++||+++.+ ++ ++ .++++.++|||||++ ++++
T Consensus 9 ~l~~~~~vlVa~SGG~DS~~Ll~ll~~-~~----~~~~g~~v~avhvdhglr-~~s~ 59 (433)
T 1ni5_A 9 QLLTSRQILVAFSGGLDSTVLLHQLVQ-WR----TENPGVALRAIHVHHGLS-ANAD 59 (433)
T ss_dssp HHTTCSEEEEECCSBHHHHHHHHHHHH-HH----TTSTTCEEEEEEECCSCC-SSHH
T ss_pred hcCCCCEEEEEEcchHHHHHHHHHHHH-HH----HhcCCCeEEEEEEECCCC-cccH
Confidence 357899999999999999999999998 43 23 789999999999984 4443
No 4
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=99.20 E-value=1.3e-11 Score=81.37 Aligned_cols=38 Identities=21% Similarity=0.248 Sum_probs=33.5
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
+++|+||||||+||++||+++.+ .+.++.++|+|+|+.
T Consensus 44 ~~~v~Va~SGGkDS~vLL~ll~~---------~~~~v~~v~vd~g~~ 81 (215)
T 1sur_A 44 PGEYVLSSSFGIQAAVSLHLVNQ---------IRPDIPVILTDTGYL 81 (215)
T ss_dssp CSEEEEECCCCTTHHHHHHHHHH---------HSTTCEEEEEECSCB
T ss_pred CCCEEEEecCCHHHHHHHHHHHH---------hCCCCeEEEeeCCCC
Confidence 47999999999999999999997 236789999999974
No 5
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=98.99 E-value=5.9e-10 Score=73.46 Aligned_cols=37 Identities=30% Similarity=0.324 Sum_probs=33.5
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
+||+|++|||+||+++++++.+ .|+++.++|+|+++.
T Consensus 7 ~kv~v~~SGG~DS~~ll~ll~~---------~g~~v~~~~v~~~~~ 43 (203)
T 3k32_A 7 MDVHVLFSGGKDSSLSAVILKK---------LGYNPHLITINFGVI 43 (203)
T ss_dssp EEEEEECCCSHHHHHHHHHHHH---------TTEEEEEEEEECSSS
T ss_pred CeEEEEEECcHHHHHHHHHHHH---------cCCCeEEEEEeCCCc
Confidence 6899999999999999999875 478999999999973
No 6
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=98.97 E-value=5.5e-10 Score=78.04 Aligned_cols=40 Identities=23% Similarity=0.351 Sum_probs=35.3
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSIS 52 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~~ 52 (70)
+++|+|++|||+||+++++++.+ .+|+++.++|+|+|+.+
T Consensus 20 ~~kvlvalSGGvDSsvla~ll~~--------~~g~~v~av~vd~g~~~ 59 (308)
T 2dpl_A 20 DSKAIIALSGGVDSSTAAVLAHK--------AIGDRLHAVFVNTGFLR 59 (308)
T ss_dssp TSCEEEECCSSHHHHHHHHHHHH--------HHGGGEEEEEEECSCCC
T ss_pred CCCEEEEEeChHHHHHHHHHHHH--------hhCCCEEEEEEcCCCCC
Confidence 57999999999999999999987 24689999999999843
No 7
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=98.95 E-value=9.9e-10 Score=71.42 Aligned_cols=38 Identities=21% Similarity=0.237 Sum_probs=33.5
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
.++|+|++|||+||+++++++.+ .+.++.++|+|++..
T Consensus 3 ~~~v~v~lSGG~DS~~ll~ll~~---------~~~~v~~~~~~~~~~ 40 (219)
T 3bl5_A 3 KEKAIVVFSGGQDSTTCLLWALK---------EFEEVETVTFHYNQR 40 (219)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHH---------HCSEEEEEEEESSCT
T ss_pred CCCEEEEccCcHHHHHHHHHHHH---------cCCceEEEEEeCCCC
Confidence 57899999999999999999986 247899999999973
No 8
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=98.94 E-value=1.5e-09 Score=80.31 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=36.8
Q ss_pred CCCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 2 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 2 i~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
+.+++||+||||||+||+++++++++ . |+++.++|+|+|.
T Consensus 7 l~~~~KVvVA~SGGlDSSvll~~L~e--------~-G~eViavtvd~Gq 46 (455)
T 1k92_A 7 LPVGQRIGIAFSGGLDTSAALLWMRQ--------K-GAVPYAYTANLGQ 46 (455)
T ss_dssp CCTTSEEEEECCSSHHHHHHHHHHHH--------T-TCEEEEEEEECCC
T ss_pred hcCCCeEEEEEcChHHHHHHHHHHHH--------c-CCEEEEEEEEcCC
Confidence 56789999999999999999999987 3 8999999999996
No 9
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.92 E-value=5.4e-10 Score=75.85 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=33.0
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
+++|+||+|||+||++||+++.+ + +.++.++|+|+|+.
T Consensus 45 ~~~v~va~SGG~DS~vLL~ll~~-~--------~~~v~vv~idtg~~ 82 (252)
T 2o8v_A 45 PGEYVLSSSFGIQAAVSLHLVNQ-I--------RPDIPVILTDTGYL 82 (252)
T ss_dssp CSCEEEECCCSTTHHHHHHHHHH-H--------STTCEEEECCCSCB
T ss_pred CCCEEEEeCCCHHHHHHHHHHHH-h--------CCCCeEEEecCCCC
Confidence 46899999999999999999997 2 25788999999974
No 10
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=98.91 E-value=6.7e-10 Score=78.44 Aligned_cols=43 Identities=16% Similarity=0.153 Sum_probs=35.6
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
..++++|+||||+||++||+++.+.. .+.++++.++|+|+|+.
T Consensus 45 ~~~~ivVa~SGGkDS~vLL~Ll~~~~-----~~~~~~i~vv~vDtg~~ 87 (325)
T 1zun_A 45 EFDNPVMLYSIGKDSAVMLHLARKAF-----FPGKLPFPVMHVDTRWK 87 (325)
T ss_dssp HCSSEEEECCSSHHHHHHHHHHHHHH-----TTSCCSSCEEEECCSCC
T ss_pred hCCCEEEEEcChHHHHHHHHHHHHhc-----cccCCCEEEEEEECCCC
Confidence 35689999999999999999999822 23467788999999984
No 11
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=98.87 E-value=1.1e-09 Score=81.18 Aligned_cols=39 Identities=23% Similarity=0.409 Sum_probs=35.1
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
.++|+||+|||+||+++++++.+ .+|.++.++|+|+|++
T Consensus 230 ~~kvlvalSGGvDSsvla~ll~~--------~~G~~v~av~vd~g~~ 268 (527)
T 3tqi_A 230 KEQVIVGLSGGVDSAVTATLVHK--------AIGDQLVCVLVDTGLL 268 (527)
T ss_dssp TSCEEEECTTTHHHHHHHHHHHH--------HHGGGEEEEEECCSCS
T ss_pred CCeEEEEEecCcCHHHHHHHHHH--------HhCCeEEEEEeccCCC
Confidence 48999999999999999999987 2478999999999985
No 12
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=98.86 E-value=2.1e-09 Score=73.36 Aligned_cols=41 Identities=7% Similarity=0.178 Sum_probs=34.1
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
.++++|++|||+||++||+++.+ +. .+ +.++.++|+|+|+.
T Consensus 41 ~~~v~va~SGGkDS~vLL~ll~~-~~----~~-~~~i~vv~iDtg~~ 81 (261)
T 2oq2_A 41 FPHLFQTTAFGLTGLVTIDMLSK-LS----EK-YYMPELLFIDTLHH 81 (261)
T ss_dssp CSSEEEECCCCHHHHHHHHHHHH-HT----TT-SCCCEEEEECCSCB
T ss_pred CCCEEEEecCCHHHHHHHHHHHH-hC----cc-CCCeeEEEecCCCC
Confidence 35899999999999999999998 32 12 46789999999984
No 13
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=98.85 E-value=3.4e-09 Score=70.29 Aligned_cols=37 Identities=27% Similarity=0.276 Sum_probs=32.7
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
++++|++|||+||+++++++.+ .+.++.++|+|++.+
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~~---------~~~~v~av~~~~g~~ 39 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQALQ---------DYDDVHCITFDYGQR 39 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHHH---------HCSEEEEEEEESSSS
T ss_pred CCEEEEecCcHHHHHHHHHHHH---------cCCCEEEEEEECCCC
Confidence 6899999999999999999986 137899999999973
No 14
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=98.83 E-value=2.8e-09 Score=76.67 Aligned_cols=39 Identities=26% Similarity=0.359 Sum_probs=34.2
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+++||+||+|||+||++++++|.+ .|+++.++|++++.
T Consensus 15 ~~~~kVvVa~SGGvDSsv~a~lL~~---------~G~~V~~v~~~~~~ 53 (380)
T 2der_A 15 ETAKKVIVGMSGGVDSSVSAWLLQQ---------QGYQVEGLFMKNWE 53 (380)
T ss_dssp --CCEEEEECCSCSTTHHHHHHHHT---------TCCEEEEEEEECCC
T ss_pred CCCCEEEEEEEChHHHHHHHHHHHH---------cCCeEEEEEEEcCc
Confidence 4678999999999999999999986 48999999999986
No 15
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=98.83 E-value=3.3e-09 Score=76.85 Aligned_cols=37 Identities=30% Similarity=0.387 Sum_probs=33.4
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
+||+||+|||+||+++++++.+ .+++++.++|+|+|.
T Consensus 1 ~kVvva~SGG~DSsvll~ll~~--------~~g~~V~av~vd~g~ 37 (400)
T 1kor_A 1 MKIVLAYSGGLDTSIILKWLKE--------TYRAEVIAFTADIGQ 37 (400)
T ss_dssp CEEEEECCSSHHHHHHHHHHHH--------HHTCEEEEEEEESSC
T ss_pred CcEEEEEeChHHHHHHHHHHHH--------hhCCcEEEEEEeCCC
Confidence 5899999999999999999986 347899999999996
No 16
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=98.82 E-value=4.4e-09 Score=75.44 Aligned_cols=38 Identities=26% Similarity=0.400 Sum_probs=34.7
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
+++||+|++|||+||++++++|.+ .|+++.++|++++.
T Consensus 8 ~~~kVlVa~SGGvDSsv~a~lL~~---------~G~~V~~v~~~~~~ 45 (376)
T 2hma_A 8 SKTRVVVGMSGGVDSSVTALLLKE---------QGYDVIGIFMKNWD 45 (376)
T ss_dssp GGSEEEEECCSSHHHHHHHHHHHH---------TTCEEEEEEEECCC
T ss_pred CCCeEEEEEeCHHHHHHHHHHHHH---------cCCcEEEEEEECCC
Confidence 467999999999999999999987 47999999999986
No 17
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=98.82 E-value=5e-09 Score=77.20 Aligned_cols=39 Identities=33% Similarity=0.493 Sum_probs=34.9
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSIS 52 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~~ 52 (70)
+++|+||+|||+||+++++++.+ . |+++.++|+|+|+.+
T Consensus 209 ~~kvvvalSGGvDSsvla~ll~~--------~-g~~v~av~vd~g~~~ 247 (503)
T 2ywb_A 209 KDRVLLAVSGGVDSSTLALLLAK--------A-GVDHLAVFVDHGLLR 247 (503)
T ss_dssp TSEEEEEECSSHHHHHHHHHHHH--------H-TCEEEEEEEECSCSC
T ss_pred CccEEEEecCCcchHHHHHHHHH--------c-CCeEEEEEEeCCCCC
Confidence 47999999999999999999987 1 789999999999843
No 18
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=98.80 E-value=7e-09 Score=74.91 Aligned_cols=39 Identities=26% Similarity=0.145 Sum_probs=34.5
Q ss_pred CCCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 2 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 2 i~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
+..+++++|++|||+||+++++++.+ .|+++.++|+|++
T Consensus 184 i~~~~kvlvalSGGvDS~vll~ll~~---------~G~~v~av~v~~~ 222 (413)
T 2c5s_A 184 VGVGGKVMVLLSGGIDSPVAAYLTMK---------RGVSVEAVHFHSP 222 (413)
T ss_dssp TTTTEEEEEECCSSSHHHHHHHHHHH---------BTEEEEEEEEECT
T ss_pred cCCCCeEEEEeCCCChHHHHHHHHHH---------cCCcEEEEEEeCC
Confidence 34578999999999999999999986 3799999999975
No 19
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=98.73 E-value=8.5e-09 Score=72.13 Aligned_cols=46 Identities=13% Similarity=0.201 Sum_probs=34.5
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhh------------c-ccCCceEEEEEEeCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSS------------H-KRILFSVCAIYIDDGS 50 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~------------~-~~~~~~~~~v~vd~~~ 50 (70)
+++|+|+||||+||+|||+++.+.+.+.. . ...+.++.++|+|+|.
T Consensus 53 ~~~i~vafSGGKDS~VLL~L~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~ 111 (306)
T 2wsi_A 53 NGEISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEE 111 (306)
T ss_dssp SSSEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTT
T ss_pred cCCEEEEecCCHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCeeEEEEeCCC
Confidence 36899999999999999999988443210 0 0124678999999996
No 20
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=98.73 E-value=1.4e-08 Score=73.93 Aligned_cols=38 Identities=26% Similarity=0.434 Sum_probs=34.1
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.++||+||+|||+||+++++++.+ . |+++.++|+|+|.
T Consensus 4 ~~~kVvvalSGGlDSsvll~lL~e--------~-G~eV~av~vd~g~ 41 (413)
T 2nz2_A 4 SKGSVVLAYSGGLDTSCILVWLKE--------Q-GYDVIAYLANIGQ 41 (413)
T ss_dssp -CEEEEEECCSSHHHHHHHHHHHH--------T-TEEEEEEEEESSC
T ss_pred CCCeEEEEEcChHHHHHHHHHHHH--------c-CCEEEEEEEECCc
Confidence 467999999999999999999986 2 7899999999997
No 21
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=98.68 E-value=1.4e-08 Score=75.99 Aligned_cols=40 Identities=23% Similarity=0.293 Sum_probs=35.7
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
+.++|++|+|||+||++++.++.+ .+|.++.++|+|+|+.
T Consensus 254 ~~~~vvvalSGGvDSsv~a~ll~~--------~~G~~v~~v~vd~g~~ 293 (556)
T 3uow_A 254 HDHYVIAAMSGGIDSTVAAAYTHK--------IFKERFFGIFIDNGLL 293 (556)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHH--------HHGGGEEEEEEECSCS
T ss_pred CCceEEEEcccCCCHHHHHHHHHH--------HhCCeEEEEEEecCCC
Confidence 368999999999999999999986 4578999999999984
No 22
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=98.63 E-value=2.1e-08 Score=68.50 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=34.3
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
..++|+|++|||+||+++++++.+ .+|.++.++|++++.
T Consensus 25 g~~~vvv~lSGGiDSsv~a~l~~~--------~~g~~v~av~~~~~~ 63 (249)
T 3p52_A 25 QSQGVVLGLSGGIDSALVATLCKR--------ALKENVFALLMPTQI 63 (249)
T ss_dssp SCSEEEEECCSSHHHHHHHHHHHH--------HHTTSEEEEECCSCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHH--------HcCCcEEEEEecCCC
Confidence 357999999999999999999987 246899999999986
No 23
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=98.62 E-value=6.8e-09 Score=71.24 Aligned_cols=37 Identities=19% Similarity=0.377 Sum_probs=32.5
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
+++|+|++| |+||++||+++.+ .+.++.++|+|+|+.
T Consensus 54 g~~i~Va~S-GkDS~vLL~Ll~~---------~~~~i~vv~iDtg~~ 90 (275)
T 2goy_A 54 GDELWISFS-GAEDVVLVDMAWK---------LNRNVKVFSLDTGRL 90 (275)
T ss_dssp STTEEEECC-SSTTHHHHHHHHH---------HCTTCCEEEECCSCC
T ss_pred CCCEEEEee-cHHHHHHHHHHHH---------hCCCceEEEEeCCCC
Confidence 478999999 9999999999987 246788999999984
No 24
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=98.62 E-value=3.6e-08 Score=73.01 Aligned_cols=39 Identities=28% Similarity=0.493 Sum_probs=34.6
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 51 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~ 51 (70)
.+++++++|||+||+++++++.+ .+|.++.++|+|+++.
T Consensus 227 ~~~vvvalSGGvDSsv~a~ll~~--------a~G~~v~av~v~~g~~ 265 (525)
T 1gpm_A 227 DDKVILGLSGGVDSSVTAMLLHR--------AIGKNLTCVFVDNGLL 265 (525)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHH--------HHGGGEEEEEEECSCS
T ss_pred ccceEEEecCCCCHHHHHHHHHH--------HhCCCEEEEEEeCCCC
Confidence 47999999999999999999986 2468999999999984
No 25
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=98.61 E-value=2.6e-08 Score=67.31 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=32.9
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCC-ceEEEEEEeCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL-FSVCAIYIDDGS 50 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~-~~~~~v~vd~~~ 50 (70)
.++|+|++|||+||+++++++.+ ..+ .++.++|++++.
T Consensus 22 ~~~vvv~lSGGiDSs~~~~l~~~--------~~g~~~v~av~~~~~~ 60 (257)
T 2e18_A 22 NNGVVIGISGGVDSATVAYLATK--------ALGKEKVLGLIMPYFE 60 (257)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHH--------HHCGGGEEEEECCSSC
T ss_pred CCcEEEEecCCHHHHHHHHHHHH--------hcCCCcEEEEEeCCCC
Confidence 57899999999999999999987 223 689999999985
No 26
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=98.56 E-value=9e-08 Score=73.46 Aligned_cols=40 Identities=35% Similarity=0.404 Sum_probs=35.3
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCC-ceEEEEEEeCCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL-FSVCAIYIDDGSIS 52 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~-~~~~~v~vd~~~~~ 52 (70)
.+++++++|||+||+++++++.+ .+| .++.++|+|+|+++
T Consensus 240 ~~~vvv~lSGGvDSsVla~Ll~~--------alG~~~V~aV~vd~g~~~ 280 (697)
T 2vxo_A 240 TSKVLVLLSGGVDSTVCTALLNR--------ALNQEQVIAVHIDNGFMR 280 (697)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHH--------HSCGGGEEEEEEECSCCC
T ss_pred ccceEEEccCchHHHHHHHHHHH--------hcCCceEEEEEeccccCC
Confidence 47999999999999999999986 356 89999999999853
No 27
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=98.55 E-value=1.1e-07 Score=69.75 Aligned_cols=37 Identities=32% Similarity=0.504 Sum_probs=34.0
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+||+||+|||.||++++.++++ + |.++.++|+|.|.
T Consensus 14 ~~KVVVA~SGGlDSSv~a~~Lke--------~-G~eViavt~d~Gq 50 (421)
T 1vl2_A 14 KEKVVLAYSGGLDTSVILKWLCE--------K-GFDVIAYVANVGQ 50 (421)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHH--------T-TCEEEEEEEESSC
T ss_pred cCCEEEEeCCcHHHHHHHHHHHH--------C-CCeEEEEEEEcCC
Confidence 47899999999999999999987 3 8999999999996
No 28
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=98.53 E-value=5.9e-08 Score=66.05 Aligned_cols=39 Identities=21% Similarity=0.135 Sum_probs=33.3
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
..++|+|++|||+||+++++++.+. .+.++.++|++++.
T Consensus 24 ~~~~vvv~lSGGiDSsv~~~l~~~~--------~~~~v~av~~~~~~ 62 (268)
T 1xng_A 24 GFKKVVYGLSGGLDSAVVGVLCQKV--------FKENAHALLMPSSV 62 (268)
T ss_dssp TCCCEEEECCSSHHHHHHHHHHHHH--------HGGGEEEEECCCSS
T ss_pred CCCCEEEEccCcHHHHHHHHHHHHh--------CCCCEEEEEeCCCC
Confidence 4578999999999999999999871 14689999999885
No 29
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=98.33 E-value=6.9e-07 Score=60.81 Aligned_cols=38 Identities=16% Similarity=0.272 Sum_probs=30.8
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
..++|+|++|||.||+++++++.+ .. .+..++|++++.
T Consensus 28 ~~~~vvv~lSGGiDSsv~a~l~~~--------~~-~~~~av~~~~~~ 65 (249)
T 3fiu_A 28 PAEGFVIGLSGGIDSAVAASLAVK--------TG-LPTTALILPSDN 65 (249)
T ss_dssp TCSEEEEECCSSHHHHHHHHHHHH--------TT-SCEEEEECCCTT
T ss_pred CCCCEEEEecCcHHHHHHHHHHHH--------hC-CCCEEEEecCCC
Confidence 358999999999999999999987 12 344499999875
No 30
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=98.33 E-value=5e-07 Score=64.14 Aligned_cols=46 Identities=15% Similarity=0.263 Sum_probs=31.2
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhh-c--------cc---C-CceEEEEEEeCCCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSS-H--------KR---I-LFSVCAIYIDDGSI 51 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~-~--------~~---~-~~~~~~v~vd~~~~ 51 (70)
++++++||||+||+||||++.+.+.+.. . .+ . ..++.++|+|+|..
T Consensus 59 ~~ialSfSGGKDStVLLhL~~kal~~~~~~~~~~~~~~~~~~~~p~~~ipvifiDTG~~ 117 (308)
T 3fwk_A 59 GEISFSYNGGKDCQVLLLLYLSCLWEYYIVKLSQSQFDGKFHRFPLTKLPTVFIDHDDT 117 (308)
T ss_dssp SSEEEECCSSHHHHHHHHHHHHHHHHHHTCCE-----------------EEEECCCTTC
T ss_pred CCEEEEecCChhHHHHHHHHHHHhhhhcccccccccccccccccCCCCccEEEEeCCCC
Confidence 6799999999999999999987432100 0 00 1 24788999999974
No 31
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=98.13 E-value=3.3e-06 Score=57.75 Aligned_cols=35 Identities=26% Similarity=0.134 Sum_probs=29.1
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
-|+++++|||+||++.++++.+ .|+++.+++...+
T Consensus 5 MKvvvl~SGGkDSs~al~~l~~---------~G~eV~~L~~~~~ 39 (237)
T 3rjz_A 5 ADVAVLYSGGKDSNYALYWAIK---------NRFSVKFLVTMVS 39 (237)
T ss_dssp SEEEEECCSSHHHHHHHHHHHH---------TTCEEEEEEEEEC
T ss_pred CEEEEEecCcHHHHHHHHHHHH---------cCCeEEEEEEEcC
Confidence 4899999999999999998876 4788888766544
No 32
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=97.92 E-value=1e-05 Score=55.82 Aligned_cols=45 Identities=16% Similarity=0.133 Sum_probs=31.7
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcc---cCCceEEEEEEeCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHK---RILFSVCAIYIDDGS 50 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~---~~~~~~~~v~vd~~~ 50 (70)
..+++|++|||.||++++.++++-+.. +.. .-++++.+++++.+.
T Consensus 40 ~~~vvvglSGGvDSsv~a~L~~~a~~~-lg~~~~~~~~~v~av~~~~~~ 87 (275)
T 1wxi_A 40 IKSLVLGISGGQDSTLAGKLCQMAINE-LRLETGNESLQFIAVRLPYGV 87 (275)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHH-HHHHHCCTTCEEEEEECCSSS
T ss_pred CCCEEEECcCcHHHHHHHHHHHHHHHH-hccccccccceEEEEEeCCCC
Confidence 468999999999999999888762210 000 114588999988653
No 33
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=97.87 E-value=9.4e-06 Score=55.64 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=30.5
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCC-ceEEEEEEeCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL-FSVCAIYIDDG 49 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~-~~~~~v~vd~~ 49 (70)
..+|+|++|||.||++++.++++-... +....+ .++.+++++.+
T Consensus 38 ~~~vvvgLSGGvDSsv~a~La~~a~~~-lg~~~~~~~v~av~~~~~ 82 (271)
T 1kqp_A 38 AKGFVLGISGGQDSTLAGRLAQLAVES-IREEGGDAQFIAVRLPHG 82 (271)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHH-HHHTTCCCEEEEEECCSS
T ss_pred CCCEEEECCCCHHHHHHHHHHHHHHHH-hcccCCCceEEEEEeCCC
Confidence 468999999999999999988762110 000001 57888998865
No 34
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=97.86 E-value=1.1e-05 Score=60.21 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=32.4
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCC-ceEEEEEEeCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL-FSVCAIYIDDGS 50 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~-~~~~~v~vd~~~ 50 (70)
.++|+|++|||.||++++.++.+ .+| .++.+++++.+.
T Consensus 326 ~~~vvvglSGGvDSsv~a~la~~--------alG~~~v~~v~m~~~~ 364 (590)
T 3n05_A 326 FRSVLIGLSGGIDSALVAAIACD--------ALGAQNVYGVSMPSKY 364 (590)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHH--------HHCGGGEEEEECCCSS
T ss_pred CCcEEEEcCCCHHHHHHHHHHHH--------HhCcccEEEEEECCCC
Confidence 46899999999999999998876 345 789999999765
No 35
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=97.79 E-value=3.7e-05 Score=53.66 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=32.0
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
....|+++++|| .||+++++++.+ .|+++.++|++.+
T Consensus 177 g~~~kvlvllSG-vDS~vaa~ll~~---------~G~~v~~v~~~~~ 213 (307)
T 1vbk_A 177 GTEGRMIGILHD-ELSALAIFLMMK---------RGVEVIPVYIGKD 213 (307)
T ss_dssp TTTCEEEEECSS-HHHHHHHHHHHH---------BTCEEEEEEESCS
T ss_pred CCCCcEEEEEeC-CcHHHHHHHHHh---------CCCeEEEEEEEEC
Confidence 345799999999 999999999886 4899999999943
No 36
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=97.76 E-value=2e-05 Score=54.77 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=32.3
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhc---ccCCceEEEEEEeCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSH---KRILFSVCAIYIDDGS 50 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~---~~~~~~~~~v~vd~~~ 50 (70)
.++++|++|||.||++++.++++-.. .+. ...+.++.+++++.+.
T Consensus 40 ~~~vvvglSGGvDSal~a~l~~~A~~-~Lg~~~~~~~~~v~av~~p~~~ 87 (279)
T 3q4g_A 40 YKSLVLGISGGVDSTTCGRLAQLAVE-ELNQQHNTTEYQFIAVRLPYGE 87 (279)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHH-HHHHHTTCSCCEEEEEECCSSS
T ss_pred CCCEEEEccCCHHHHHHHHHHHHHHH-HhCcccccCCceEEEEEecCCC
Confidence 47899999999999999998765211 110 1125689999998653
No 37
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=97.50 E-value=0.00017 Score=50.37 Aligned_cols=44 Identities=16% Similarity=0.097 Sum_probs=29.4
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhc-ccCCceEEEEEEeCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSH-KRILFSVCAIYIDDG 49 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~-~~~~~~~~~v~vd~~ 49 (70)
.++++|++|||.||++++.++..-.. .+. .....++.++++..+
T Consensus 46 ~~~vvvglSGGiDSal~a~La~~A~d-aLG~~~~~~~viav~~p~~ 90 (285)
T 3dpi_A 46 LRACVLGISGGIDSSTAGRLAQLAVE-RLRASGYDARFVAMRLPYG 90 (285)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHH-HHHHTTCCCEEEEEECCSC
T ss_pred CCcEEEEccCChhHHHHHHHHHHHHH-HhcccCcccEEEEEEcCCC
Confidence 47899999999999999888765111 111 112236777777654
No 38
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=97.42 E-value=0.00012 Score=55.97 Aligned_cols=41 Identities=22% Similarity=0.176 Sum_probs=30.1
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCC---ceEEEEEEeCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL---FSVCAIYIDDGS 50 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~---~~~~~v~vd~~~ 50 (70)
.++++|++|||.||++++.++.+-. +.+| .++.+++++...
T Consensus 361 ~~~vvvglSGGvDSsvaa~l~~~a~-----~~lg~~~~~v~~v~m~~~~ 404 (680)
T 3sdb_A 361 YPKVVIGVSGGLDSTHALIVATHAM-----DREGRPRSDILAFALPGFA 404 (680)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHHH-----HHTTCCGGGEEEEECCC--
T ss_pred CCcEEEEecCCccHHHHHHHHHHHH-----HHhCCCCceEEEEEECCCC
Confidence 4689999999999998877776522 2344 678999998554
No 39
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=97.12 E-value=0.00033 Score=52.93 Aligned_cols=23 Identities=17% Similarity=0.250 Sum_probs=19.3
Q ss_pred CCCeEEEEecCchhHHHHHHHHH
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQ 26 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~ 26 (70)
..++|+|++|||.||++++.++.
T Consensus 302 g~~~vvlglSGGvDSsv~A~Lv~ 324 (634)
T 3ilv_A 302 RSKGFVLSLSGGADSSACAIMVA 324 (634)
T ss_dssp TCCSEEEECCSSHHHHHHHHHHH
T ss_pred CCCeEEEEccCCHHHHHHHHHHH
Confidence 34789999999999998887754
No 40
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=96.57 E-value=0.0023 Score=47.10 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=26.8
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEe
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd 47 (70)
...+|.+++|||.||++++.++.+ .+.++.++++.
T Consensus 237 sd~~v~v~LSGGlDSs~vaala~~---------~~~~~~~~t~~ 271 (503)
T 1q15_A 237 RFDTVGIPLSGGLDSSLVTALASR---------HFKKLNTYSIG 271 (503)
T ss_dssp GCSEEEEECCSSHHHHHHHHHHTT---------TCSEEEEEEEE
T ss_pred CCCcEEEECCCCHHHHHHHHHHHH---------hCCCcEEEEEe
Confidence 356899999999999999988875 22356666665
No 41
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=96.23 E-value=0.0027 Score=46.82 Aligned_cols=24 Identities=29% Similarity=0.371 Sum_probs=21.3
Q ss_pred CCCeEEEEecCchhHHHHHHHHHH
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQE 27 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~ 27 (70)
...+|.+.+|||.||++++.++.+
T Consensus 240 sd~~vgv~LSGGlDSS~vaala~~ 263 (513)
T 1jgt_A 240 PGDTPLVVLSGGIDSSGVAACAHR 263 (513)
T ss_dssp TTCCCEEECCSSHHHHHHHHHHHH
T ss_pred CCCcEEEECCCcHHHHHHHHHHHH
Confidence 346899999999999999999887
No 42
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=96.04 E-value=0.0048 Score=45.89 Aligned_cols=24 Identities=17% Similarity=0.119 Sum_probs=21.5
Q ss_pred CCCeEEEEecCchhHHHHHHHHHH
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQE 27 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~ 27 (70)
...+|.+.+|||.||++++.++.+
T Consensus 225 sdvpvgv~LSGGlDSS~iaala~~ 248 (553)
T 1ct9_A 225 SDVPYGVLLSGGLDSSIISAITKK 248 (553)
T ss_dssp CSSCEEEECCSSHHHHHHHHHHHH
T ss_pred CCCceEEeCCCCccHHHHHHHHHH
Confidence 356899999999999999999987
No 43
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=94.92 E-value=0.024 Score=42.32 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=27.4
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
..++++|++|||.||++.+.+..+-|. .-++.++++-.
T Consensus 299 g~~~~vlglSGGiDSal~~~la~~alg-------~~~v~~v~mp~ 336 (565)
T 4f4h_A 299 GFPGAIIGLSGGVDSALVLAVAVDALG-------AERVRAVMMPS 336 (565)
T ss_dssp TCCCEEEECCSSHHHHHHHHHHHHHHC-------GGGEEEEECCC
T ss_pred CCCcEEEecCCCccHHHHHHHHHHHhC-------CccEEEEeccc
Confidence 347899999999999999888776221 23566666543
No 44
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=94.57 E-value=0.11 Score=31.37 Aligned_cols=44 Identities=18% Similarity=0.104 Sum_probs=33.6
Q ss_pred CCCCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 1 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 1 ~i~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
|....++|+|++.|..+|..++....+ + .+..+.++.++|+-..
T Consensus 1 M~~m~~~ILv~vD~s~~s~~al~~A~~-l----a~~~~a~l~ll~v~~~ 44 (170)
T 2dum_A 1 MIFMFRKVLFPTDFSEGAYRAVEVFEK-R----NKMEVGEVILLHVIDE 44 (170)
T ss_dssp ---CCSEEEEECCSSHHHHHHHHHHHH-H----CCSCCSEEEEEEEEET
T ss_pred CccccceEEEEecCCHHHHHHHHHHHH-H----HHhcCCEEEEEEEecC
Confidence 445568999999999999988888877 3 3467889999998643
No 45
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=94.50 E-value=0.13 Score=30.71 Aligned_cols=40 Identities=15% Similarity=0.044 Sum_probs=33.1
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
...+|+|++.|...|..++....+ + .+..+.++.++|+-.
T Consensus 4 ~~~~ILv~vD~s~~s~~al~~a~~-l----a~~~~a~l~ll~v~~ 43 (162)
T 1mjh_A 4 MYKKILYPTDFSETAEIALKHVKA-F----KTLKAEEVILLHVID 43 (162)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHH-T----CCSSCCEEEEEEEEE
T ss_pred ccceEEEEeCCCHHHHHHHHHHHH-H----HhhcCCeEEEEEEec
Confidence 468999999999999988888877 3 346788999999964
No 46
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=92.82 E-value=0.32 Score=28.16 Aligned_cols=41 Identities=15% Similarity=0.141 Sum_probs=33.7
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
++|+|++.|...|..++....+ +. .+..+.++.++|+....
T Consensus 2 ~~ILv~~D~s~~s~~al~~a~~-la---~~~~~a~l~ll~v~~~~ 42 (138)
T 3idf_A 2 KKLLFAIDDTEACERAAQYILD-MF---GKDADCTLTLIHVKPEF 42 (138)
T ss_dssp EEEEEECCSSHHHHHHHHHHHH-HH---TTCTTEEEEEEEEECCC
T ss_pred ceEEEEeCCCHHHHHHHHHHHH-Hh---ccCCCCEEEEEEEecCC
Confidence 5899999999999999888887 32 04678999999998764
No 47
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=92.70 E-value=0.21 Score=29.11 Aligned_cols=39 Identities=10% Similarity=0.121 Sum_probs=31.9
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
++|+|++.|...|..++....+ +. +..+.++.++|+...
T Consensus 3 ~~ILv~~D~s~~s~~al~~a~~-la----~~~~a~l~ll~v~~~ 41 (137)
T 2z08_A 3 KTILLAYDGSEHARRAAEVAKA-EA----EAHGARLIVVHAYEP 41 (137)
T ss_dssp SEEEEECCSSHHHHHHHHHHHH-HH----HHHTCEEEEEEEECC
T ss_pred ceEEEEeCCCHHHHHHHHHHHH-HH----hhcCCEEEEEEEecC
Confidence 6899999999999988888776 33 346789999999864
No 48
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=92.61 E-value=0.2 Score=29.19 Aligned_cols=39 Identities=28% Similarity=0.198 Sum_probs=31.4
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
.++|+|++.|...|..++....+ +. +..+.++.++|+..
T Consensus 2 ~~~ILv~~D~s~~s~~al~~a~~-la----~~~~a~l~ll~v~~ 40 (141)
T 1jmv_A 2 YKHILVAVDLSEESPILLKKAVG-IA----KRHDAKLSIIHVDV 40 (141)
T ss_dssp CSEEEEEECCSTTHHHHHHHHHH-HH----HHHTCEEEEEEEEE
T ss_pred CceEEEEecCchhhHHHHHHHHH-HH----HhcCCEEEEEEEec
Confidence 36899999999999988888776 33 34678999999973
No 49
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=92.58 E-value=0.23 Score=29.83 Aligned_cols=42 Identities=31% Similarity=0.251 Sum_probs=29.6
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
+.-||++.+++|..|+.|..-+++.. ++.|.++.+.....+.
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a-----~~~gi~v~i~a~~~~~ 46 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGA-----NLTEVRVIANSGAYGA 46 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHH-----HHHTCSEEEEEEETTS
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHH-----HHCCCceEEEEcchHH
Confidence 44589999999998888877777633 2456777766655543
No 50
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=92.57 E-value=0.22 Score=29.01 Aligned_cols=39 Identities=13% Similarity=0.171 Sum_probs=32.6
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
++|+|++.|...|..++....+ +. ++.+.++.++|+...
T Consensus 3 ~~ILv~vD~s~~s~~al~~A~~-la----~~~~a~l~ll~v~~~ 41 (147)
T 3hgm_A 3 NRIMVPVDGSKGAVKALEKGVG-LQ----QLTGAELYILCVFKH 41 (147)
T ss_dssp SEEEEECCSBHHHHHHHHHHHH-HH----HHHCCEEEEEEEECC
T ss_pred ceEEEEeCCCHHHHHHHHHHHH-HH----HhcCCEEEEEEEecC
Confidence 6899999999999999888887 33 346889999999864
No 51
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=92.20 E-value=0.3 Score=28.67 Aligned_cols=41 Identities=15% Similarity=0.166 Sum_probs=33.2
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
..++|+|++.|...|..++....+ +. +..+.++.++|+...
T Consensus 5 ~~~~ILv~vD~s~~s~~al~~a~~-la----~~~~a~l~ll~v~~~ 45 (150)
T 3tnj_A 5 VYHHILLAVDFSSEDSQVVQKVRN-LA----SQIGARLSLIHVLDN 45 (150)
T ss_dssp CCSEEEEECCCSTTHHHHHHHHHH-HH----HHHTCEEEEEEEEC-
T ss_pred ccceEEEEeCCCHHHHHHHHHHHH-HH----hhcCCEEEEEEEEcC
Confidence 467999999999999999888887 43 346789999999754
No 52
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=91.97 E-value=0.24 Score=28.93 Aligned_cols=40 Identities=20% Similarity=0.298 Sum_probs=32.8
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
.++|+|++.|...|..++....+ +. +..+.++.++|+-..
T Consensus 5 ~~~ILv~~D~s~~s~~al~~A~~-la----~~~~a~l~ll~v~~~ 44 (146)
T 3s3t_A 5 YTNILVPVDSSDAAQAAFTEAVN-IA----QRHQANLTALYVVDD 44 (146)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHH-HH----HHHTCEEEEEEEEEC
T ss_pred cceEEEEcCCCHHHHHHHHHHHH-HH----HhcCCEEEEEEEecC
Confidence 57999999999999998888887 33 346789999999754
No 53
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=91.63 E-value=0.4 Score=31.85 Aligned_cols=38 Identities=16% Similarity=0.146 Sum_probs=30.8
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEe
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd 47 (70)
...||+|++||+.-..-...+++. |++ .|.++.++.-.
T Consensus 3 ~~k~IllgvTGaiaa~k~~~ll~~-L~~-----~g~eV~vv~T~ 40 (209)
T 3zqu_A 3 GPERITLAMTGASGAQYGLRLLDC-LVQ-----EEREVHFLISK 40 (209)
T ss_dssp SCSEEEEEECSSSCHHHHHHHHHH-HHH-----TTCEEEEEECH
T ss_pred CCCEEEEEEECHHHHHHHHHHHHH-HHH-----CCCEEEEEECc
Confidence 457999999999999999999998 653 47888777544
No 54
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=91.59 E-value=0.33 Score=28.15 Aligned_cols=38 Identities=5% Similarity=-0.000 Sum_probs=31.5
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEe
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd 47 (70)
..+|+|++.|...|..++....+ +. ++.+.++.++|+.
T Consensus 4 ~~~ILv~~D~s~~s~~al~~a~~-la----~~~~a~l~ll~v~ 41 (138)
T 1q77_A 4 MKVLLVLTDAYSDCEKAITYAVN-FS----EKLGAELDILAVL 41 (138)
T ss_dssp CEEEEEEESTTCCCHHHHHHHHH-HH----TTTCCEEEEEEEC
T ss_pred ccEEEEEccCCHhHHHHHHHHHH-HH----HHcCCeEEEEEEe
Confidence 47899999999999888888776 33 4678899999986
No 55
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=90.60 E-value=0.45 Score=28.14 Aligned_cols=40 Identities=10% Similarity=0.066 Sum_probs=29.8
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.||++++++|..|+.++.-+++.++ +.|.++.+-+++.+-
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~-----~~gi~~~i~a~~~~~ 43 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAE-----KYEVPVIIEAFPETL 43 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHH-----HSCCSEEEEEECSSS
T ss_pred cEEEEECCCchhHHHHHHHHHHHHH-----HCCCCeEEEEecHHH
Confidence 4799999999988888887777554 457777666666553
No 56
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=89.81 E-value=0.7 Score=28.09 Aligned_cols=39 Identities=21% Similarity=0.219 Sum_probs=31.5
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEE--EEe
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI--YID 47 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v--~vd 47 (70)
....+|+|++.|...|..++....+ + .+ .+.++.++ |+-
T Consensus 15 ~~~~~ILv~vD~s~~s~~al~~A~~-l----A~-~~a~l~ll~a~v~ 55 (163)
T 1tq8_A 15 SAYKTVVVGTDGSDSSMRAVDRAAQ-I----AG-ADAKLIIASAYLP 55 (163)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHH-H----HT-TTSEEEEEEECCC
T ss_pred ccCCEEEEEcCCCHHHHHHHHHHHH-H----hC-CCCEEEEEEeeec
Confidence 3468999999999999988888776 3 35 78899999 764
No 57
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=88.86 E-value=0.88 Score=29.58 Aligned_cols=34 Identities=24% Similarity=0.363 Sum_probs=27.0
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEE
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIY 45 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~ 45 (70)
.||++++||+....-...++++ |++ .|.++.++.
T Consensus 2 k~IllgvTGs~aa~k~~~l~~~-L~~-----~g~~V~vv~ 35 (189)
T 2ejb_A 2 QKIALCITGASGVIYGIKLLQV-LEE-----LDFSVDLVI 35 (189)
T ss_dssp CEEEEEECSSTTHHHHHHHHHH-HHH-----TTCEEEEEE
T ss_pred CEEEEEEECHHHHHHHHHHHHH-HHH-----CCCEEEEEE
Confidence 5899999999999888888887 553 367777664
No 58
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=88.76 E-value=0.62 Score=27.57 Aligned_cols=41 Identities=7% Similarity=0.071 Sum_probs=32.7
Q ss_pred CCCeEEEEec--CchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 4 PQDKVLVAFS--GSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 4 ~~~kvlva~S--GG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
..++|+|++. |...|..++....+ +. +..+.++.++|+-..
T Consensus 14 ~~~~ILv~vD~~~s~~s~~al~~a~~-la----~~~~a~l~ll~v~~~ 56 (156)
T 3fg9_A 14 VYRRILLTVDEDDNTSSERAFRYATT-LA----HDYDVPLGICSVLES 56 (156)
T ss_dssp CCC-EEEECCSCCCHHHHHHHHHHHH-HH----HHHTCCEEEEEEECC
T ss_pred cCceEEEEECCCCCHHHHHHHHHHHH-HH----HhcCCEEEEEEEEeC
Confidence 3579999999 99999999888887 43 346789999999765
No 59
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=88.09 E-value=0.32 Score=28.21 Aligned_cols=39 Identities=10% Similarity=0.056 Sum_probs=32.0
Q ss_pred CeEEEEecCchh--HHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 6 DKVLVAFSGSHS--SMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 6 ~kvlva~SGG~D--S~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
++|+|++.|... |..++....+ +. +..+.++.++|+...
T Consensus 2 k~ILv~vD~s~~~~s~~al~~a~~-la----~~~~a~l~ll~v~~~ 42 (143)
T 3fdx_A 2 NAILVPIDISDKEFTERIISHVES-EA----RIDDAEVHFLTVIPS 42 (143)
T ss_dssp CEEEEECCTTCSSCCTTHHHHHHH-HH----HHHTCEEEEEEEECC
T ss_pred CEEEEEecCChHhhHHHHHHHHHH-HH----HhcCCeEEEEEEecC
Confidence 689999999999 8888888776 33 346789999999865
No 60
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=88.07 E-value=2 Score=24.65 Aligned_cols=55 Identities=13% Similarity=0.289 Sum_probs=37.9
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCCCCcCcccccCccccccCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNFGSVCPY 69 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~~~c~~ 69 (70)
.+.++|++-+.+|..|..+...|++ .|++- ..++-|+ .+...+.+....+..|+-
T Consensus 54 ~~~~~ivvyC~~G~rs~~aa~~L~~---------~G~~~--~~l~GG~-~~W~~~g~p~~~~~~~~~ 108 (110)
T 2k0z_A 54 HKDKKVLLHCRAGRRALDAAKSMHE---------LGYTP--YYLEGNV-YDFEKYGFRMVYDDTCDK 108 (110)
T ss_dssp CSSSCEEEECSSSHHHHHHHHHHHH---------TTCCC--EEEESCG-GGTTTTTCCCBCCCSSCS
T ss_pred CCCCEEEEEeCCCchHHHHHHHHHH---------CCCCE--EEecCCH-HHHHHCCCcEecCCCCCC
Confidence 4567788888888888877777775 57764 6788886 555555554455666753
No 61
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=87.74 E-value=0.89 Score=29.33 Aligned_cols=38 Identities=24% Similarity=0.374 Sum_probs=30.0
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
..||++++|||.-..-...++++ |+ +.|.++.++.=..
T Consensus 5 ~k~IllgvTGs~aa~k~~~ll~~-L~-----~~g~~V~vv~T~~ 42 (175)
T 3qjg_A 5 GENVLICLCGSVNSINISHYIIE-LK-----SKFDEVNVIASTN 42 (175)
T ss_dssp CCEEEEEECSSGGGGGHHHHHHH-HT-----TTCSEEEEEECTG
T ss_pred CCEEEEEEeCHHHHHHHHHHHHH-HH-----HCCCEEEEEECcC
Confidence 36999999999999888888887 54 3578888776553
No 62
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=87.38 E-value=0.57 Score=30.67 Aligned_cols=36 Identities=19% Similarity=0.321 Sum_probs=28.7
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEE
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYI 46 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~v 46 (70)
+.||++++|||.-..-...++++ |+ +.|.++.++.=
T Consensus 8 ~k~IllgvTGs~aa~k~~~l~~~-L~-----~~g~~V~vv~T 43 (194)
T 1p3y_1 8 DKKLLIGICGSISSVGISSYLLY-FK-----SFFKEIRVVMT 43 (194)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHH-HT-----TTSSEEEEEEC
T ss_pred CCEEEEEEECHHHHHHHHHHHHH-HH-----HCCCEEEEEEc
Confidence 57999999999998888888887 54 34778877654
No 63
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=87.34 E-value=0.72 Score=29.86 Aligned_cols=37 Identities=16% Similarity=0.301 Sum_probs=29.8
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
.||++++|||....-...++++ |+ +.|.++.++.-..
T Consensus 3 k~IllgvTGs~aa~k~~~l~~~-L~-----~~g~~V~vv~T~~ 39 (181)
T 1g63_A 3 GKLLICATASINVININHYIVE-LK-----QHFDEVNILFSPS 39 (181)
T ss_dssp CCEEEEECSCGGGGGHHHHHHH-HT-----TTSSCEEEEECGG
T ss_pred CEEEEEEECHHHHHHHHHHHHH-HH-----HCCCEEEEEEchh
Confidence 4899999999999988888887 54 3478888876553
No 64
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=87.34 E-value=0.81 Score=27.56 Aligned_cols=40 Identities=18% Similarity=0.105 Sum_probs=32.9
Q ss_pred CCeEEEEecC-chhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 5 QDKVLVAFSG-SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 5 ~~kvlva~SG-G~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
..+|+|++.| ...|..++....+ +. +..+.++.++||...
T Consensus 24 ~~~ILv~vD~~s~~s~~al~~A~~-la----~~~~a~l~llhV~~~ 64 (155)
T 3dlo_A 24 YMPIVVAVDKKSDRAERVLRFAAE-EA----RLRGVPVYVVHSLPG 64 (155)
T ss_dssp CCCEEEECCSSSHHHHHHHHHHHH-HH----HHHTCCEEEEEEECC
T ss_pred cCeEEEEECCCCHHHHHHHHHHHH-HH----HhcCCEEEEEEEEcC
Confidence 4689999999 9999999888887 33 346789999999765
No 65
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=87.29 E-value=0.63 Score=30.62 Aligned_cols=41 Identities=15% Similarity=0.181 Sum_probs=30.5
Q ss_pred CCCCeEEEEecCchhHH-HHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 3 RPQDKVLVAFSGSHSSM-ALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~-~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
-.+.||++++||+.-.. -.+.++++ |+ +.|.++.++.=...
T Consensus 5 l~~k~I~lgiTGs~aa~~k~~~ll~~-L~-----~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 5 FAGKHVGFGLTGSHCTYHEVLPQMER-LV-----ELGAKVTPFVTHTV 46 (201)
T ss_dssp CTTCEEEEECCSCGGGGGGTHHHHHH-HH-----HTTCEEEEECSSCS
T ss_pred cCCCEEEEEEEChHHHHHHHHHHHHH-Hh-----hCCCEEEEEEChhH
Confidence 35689999999997777 67788887 54 24788887765543
No 66
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=87.02 E-value=0.67 Score=30.57 Aligned_cols=40 Identities=20% Similarity=0.247 Sum_probs=29.5
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
.+.||++++|||....-...++++ |+ +..|.++.++.=..
T Consensus 18 ~~k~IllgvTGsiaa~k~~~lv~~-L~----~~~g~~V~vv~T~~ 57 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALKLPLLVSK-LL----DIPGLEVAVVTTER 57 (206)
T ss_dssp SSEEEEEEECSSGGGGTHHHHHHH-HC-------CEEEEEEECTG
T ss_pred CCCEEEEEEeChHHHHHHHHHHHH-Hh----cccCCEEEEEECHh
Confidence 357999999999998888888887 54 21578887776553
No 67
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=86.20 E-value=1.2 Score=29.07 Aligned_cols=41 Identities=22% Similarity=0.137 Sum_probs=33.5
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
..++|++|+.|...|.-.+..+.+ +. +..+.++.++|+...
T Consensus 169 ~~~~Ilv~~d~s~~s~~al~~a~~-la----~~~~~~l~ll~v~~~ 209 (294)
T 3loq_A 169 LFDRVLVAYDFSKWADRALEYAKF-VV----KKTGGELHIIHVSED 209 (294)
T ss_dssp TTSEEEEECCSSHHHHHHHHHHHH-HH----HHHTCEEEEEEECSS
T ss_pred cCCEEEEEECCCHHHHHHHHHHHH-Hh----hhcCCEEEEEEEccC
Confidence 458999999999999988888887 33 346789999999865
No 68
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=86.14 E-value=1.2 Score=29.34 Aligned_cols=41 Identities=22% Similarity=0.147 Sum_probs=32.8
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
+.++|+||+.|+..|..++....+ +. +..+.++.++|+...
T Consensus 170 ~~~~Ilv~~D~s~~s~~al~~a~~-la----~~~~a~l~ll~v~~~ 210 (309)
T 3cis_A 170 QQAPVLVGVDGSSASELATAIAFD-EA----SRRNVDLVALHAWSD 210 (309)
T ss_dssp CCCCEEEECCSSHHHHHHHHHHHH-HH----HHTTCCEEEEEESCS
T ss_pred CCCeEEEEeCCChHHHHHHHHHHH-HH----HhcCCEEEEEEEeec
Confidence 357899999999999888888877 32 356789999999754
No 69
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=85.64 E-value=1.7 Score=28.52 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=27.1
Q ss_pred eEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEE
Q psy3866 7 KVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYI 46 (70)
Q Consensus 7 kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~v 46 (70)
||++++|||.-..-...+++. |++ ..|.++.++.=
T Consensus 2 ~IllgvTGsiaa~k~~~ll~~-L~~----~~g~~V~vv~T 36 (197)
T 1sbz_A 2 KLIVGMTGATGAPLGVALLQA-LRE----MPNVETHLVMS 36 (197)
T ss_dssp EEEEEECSSSCHHHHHHHHHH-HHT----CTTCEEEEEEC
T ss_pred EEEEEEeChHHHHHHHHHHHH-HHh----ccCCEEEEEEC
Confidence 799999999988888888887 542 22778877643
No 70
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=85.64 E-value=1.3 Score=29.32 Aligned_cols=36 Identities=25% Similarity=0.282 Sum_probs=28.0
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEe
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd 47 (70)
+.||+|++|||.-..-...++++ |+ +.+ ++.++.=.
T Consensus 19 ~k~IllgvTGsiaa~k~~~ll~~-L~-----~~g-~V~vv~T~ 54 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIKFGNLCHC-FT-----EWA-EVRAVVTK 54 (209)
T ss_dssp CCEEEEEECSSGGGGGHHHHHHH-HH-----TTS-EEEEEECT
T ss_pred CCEEEEEEeCcHHHHHHHHHHHH-Hh-----cCC-CEEEEEcc
Confidence 56999999999988888888887 54 235 77776554
No 71
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=85.43 E-value=0.84 Score=30.27 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=27.3
Q ss_pred CCCCeEEEEecCchhHHH-HHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 3 RPQDKVLVAFSGSHSSMA-LLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~-Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
-.+.||++++|||.-..- ...+++. |++ .|.++.++.-...
T Consensus 3 l~~k~IllgiTGsiaayk~~~~ll~~-L~~-----~g~eV~vv~T~~A 44 (207)
T 3mcu_A 3 LKGKRIGFGFTGSHCTYEEVMPHLEK-LIA-----EGAEVRPVVSYTV 44 (207)
T ss_dssp CTTCEEEEEECSCGGGGTTSHHHHHH-HHH-----TTCEEEEEECC--
T ss_pred CCCCEEEEEEEChHHHHHHHHHHHHH-HHh-----CCCEEEEEEehHH
Confidence 356899999999964432 5677776 542 4788877765543
No 72
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=84.77 E-value=2 Score=28.01 Aligned_cols=41 Identities=10% Similarity=0.100 Sum_probs=32.0
Q ss_pred CCCeEEEEecCchh-------HHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 4 PQDKVLVAFSGSHS-------SMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 4 ~~~kvlva~SGG~D-------S~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
+.++|++|+.|+.. |.-++....+ +. +..+.++.++|+...
T Consensus 133 ~~~~Ilva~D~s~~~~~~~~~s~~al~~a~~-la----~~~~a~l~ll~v~~~ 180 (290)
T 3mt0_A 133 TGGKILAAVDVGNNDGEHRSLHAGIISHAYD-IA----GLAKATLHVISAHPS 180 (290)
T ss_dssp TTCEEEEEECTTCCSHHHHHHHHHHHHHHHH-HH----HHTTCEEEEEEEEC-
T ss_pred CCCeEEEEECCCCcchhhhHHHHHHHHHHHH-HH----HHcCCeEEEEEEecC
Confidence 45899999999987 7777777776 32 356889999999865
No 73
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=84.43 E-value=1.5 Score=28.13 Aligned_cols=41 Identities=17% Similarity=0.360 Sum_probs=31.5
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
+.++|++|+.|+..|.-++....+ +. +..+.++.++|+...
T Consensus 153 ~~~~ilv~~d~s~~~~~al~~a~~-la----~~~~a~l~ll~v~~~ 193 (268)
T 3ab8_A 153 ELEGALLGYDASESAVRALHALAP-LA----RALGLGVRVVSVHED 193 (268)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHH-HH----HHHTCCEEEEEECSS
T ss_pred CCCEEEEEECCCHHHHHHHHHHHH-hh----hcCCCEEEEEEEcCc
Confidence 347999999999999888877766 32 235778999999754
No 74
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=83.81 E-value=2.4 Score=25.42 Aligned_cols=41 Identities=20% Similarity=0.207 Sum_probs=30.8
Q ss_pred CCCeEEEEecCch---------hHHHHHHHHHHhhhhhhccc--CCceEEEEEEeC
Q psy3866 4 PQDKVLVAFSGSH---------SSMALLHLLQEGMQLSSHKR--ILFSVCAIYIDD 48 (70)
Q Consensus 4 ~~~kvlva~SGG~---------DS~~Ll~ll~~~l~~~~~~~--~~~~~~~v~vd~ 48 (70)
...+|+|++.|.. .|..++....+.+. +. .+.++.++|+..
T Consensus 4 ~~~~ILv~vD~s~~~~~~~~~~~s~~al~~a~~la~----~~~~~~a~l~ll~v~~ 55 (175)
T 2gm3_A 4 EPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIV----RSNTSDFKILLLHVQV 55 (175)
T ss_dssp -CEEEEEECCBCSSSCTTCBCHHHHHHHHHHHHHTT----TTCTTSEEEEEEEEEC
T ss_pred CccEEEEEECCCcccccccccHHHHHHHHHHHHHhh----cccCCCCEEEEEEEee
Confidence 4579999999999 88888877776222 22 578999999964
No 75
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=82.25 E-value=1.8 Score=28.47 Aligned_cols=40 Identities=5% Similarity=-0.003 Sum_probs=32.1
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
...+|+|++.|...|..++....+ +. ++.+.++.++|+..
T Consensus 18 ~~~~ILv~~D~s~~s~~al~~A~~-lA----~~~~a~l~ll~v~~ 57 (309)
T 3cis_A 18 SSLGIIVGIDDSPAAQVAVRWAAR-DA----ELRKIPLTLVHAVS 57 (309)
T ss_dssp CTTEEEEECCSSHHHHHHHHHHHH-HH----HHHTCCEEEEEECC
T ss_pred CCCeEEEEECCCHHHHHHHHHHHH-HH----HhcCCcEEEEEEec
Confidence 457999999999999988887776 33 35678999999865
No 76
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=82.06 E-value=1.3 Score=28.45 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=30.4
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
.+|+|++.|...|..++....+ +. ++.+.++.++|+-.
T Consensus 1 k~ILv~vD~s~~s~~al~~A~~-lA----~~~~a~l~ll~v~~ 38 (268)
T 3ab8_A 1 MRILLATDGSPQARGAEALAEW-LA----YKLSAPLTVLFVVD 38 (268)
T ss_dssp CCEEEECCSCGGGHHHHHHHHH-HH----HHHTCCEEEEEEEE
T ss_pred CcEEEEcCCCHHHHHHHHHHHH-HH----HHhCCcEEEEEEec
Confidence 4799999999999988888776 33 34678999999853
No 77
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=78.94 E-value=1.5 Score=28.70 Aligned_cols=42 Identities=12% Similarity=0.052 Sum_probs=33.9
Q ss_pred CCCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 2 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 2 i~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
+...++|+|++.|...|..++..... +. ++.+.++.++|+..
T Consensus 4 M~~~~~ILv~~D~s~~s~~al~~A~~-la----~~~~a~l~ll~v~~ 45 (290)
T 3mt0_A 4 MQAIRSILVVIEPDQLEGLALKRAQL-IA----GVTQSHLHLLVCEK 45 (290)
T ss_dssp TTTCCEEEEECCSSCSCCHHHHHHHH-HH----HHHCCEEEEEEECS
T ss_pred hhhhceEEEEeCCCccchHHHHHHHH-HH----HhcCCeEEEEEeeC
Confidence 34568999999999999888888877 43 35678999999975
No 78
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=77.63 E-value=5.9 Score=23.07 Aligned_cols=25 Identities=20% Similarity=0.295 Sum_probs=19.8
Q ss_pred CeEEEEecCchhHHHHHH-HHHHhhh
Q psy3866 6 DKVLVAFSGSHSSMALLH-LLQEGMQ 30 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~-ll~~~l~ 30 (70)
.||+++++.|.-|+.|+. -+++.++
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~ 44 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALR 44 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHH
Confidence 579999999998888877 6666443
No 79
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=75.49 E-value=2.9 Score=27.58 Aligned_cols=43 Identities=16% Similarity=0.312 Sum_probs=31.5
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeCCCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGSIS 52 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~~~~~ 52 (70)
....++.+++|||..=..+...|.+ .+..+ ++.+.++|+-+.+
T Consensus 30 ~~~~~~~l~LsgGstp~~~y~~L~~-------~~idw~~v~~f~~DEr~vp 73 (226)
T 3lwd_A 30 AKRERALLVVSGGSTPKPFFTSLAA-------KALPWARVDVTLADERWVT 73 (226)
T ss_dssp TTSSCEEEEECCSSTTHHHHHHHHT-------SCSCGGGEEEEESEEESSC
T ss_pred HhCCCEEEEEcCCCCHHHHHHHHHh-------cCCCchhEEEEEeeecccC
Confidence 4567899999999766666666653 35565 6899999987743
No 80
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=73.74 E-value=1.5 Score=28.56 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=33.1
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
-.++|+|++.|...|..++....+ +. +..+.++.++|+-..
T Consensus 21 m~~~ILv~vD~s~~s~~al~~A~~-lA----~~~~a~l~ll~v~~~ 61 (294)
T 3loq_A 21 QSNAMLLPTDLSENSFKVLEYLGD-FK----KVGVEEIGVLFVINL 61 (294)
T ss_dssp TTCEEEEECCSCTGGGGGGGGHHH-HH----HTTCCEEEEECCEEC
T ss_pred hhccEEEecCCCHHHHHHHHHHHH-HH----hhcCCEEEEEEEecC
Confidence 357999999999999888888777 43 357889999998644
No 81
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=72.82 E-value=6.2 Score=25.72 Aligned_cols=42 Identities=19% Similarity=0.188 Sum_probs=31.1
Q ss_pred CCCeEEEEecCchh-------HHHHHHHHHHhhhhhhcccC--CceEEEEEEeCCC
Q psy3866 4 PQDKVLVAFSGSHS-------SMALLHLLQEGMQLSSHKRI--LFSVCAIYIDDGS 50 (70)
Q Consensus 4 ~~~kvlva~SGG~D-------S~~Ll~ll~~~l~~~~~~~~--~~~~~~v~vd~~~ 50 (70)
+..+|++|+.|..+ |.-++....+ +. +.. +.++.++|+....
T Consensus 155 ~~~~Ilva~D~s~~~~~~~~~s~~al~~a~~-la----~~~~~~a~l~ll~v~~~~ 205 (319)
T 3olq_A 155 EYGTIVVAANLSNEESYHDALNLKLIELTND-LS----HRIQKDPDVHLLSAYPVA 205 (319)
T ss_dssp TTCEEEEECCCSCCSTHHHHHHHHHHHHHHH-HH----HHHCSSCCEEEEEEECCC
T ss_pred cCCeEEEEECCCCcchhHHHHHHHHHHHHHH-HH----HhccCCCeEEEEEeecCc
Confidence 46899999999983 5667777666 32 245 7899999998653
No 82
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=70.02 E-value=2.4 Score=28.09 Aligned_cols=41 Identities=24% Similarity=0.373 Sum_probs=30.6
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeCCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGSIS 52 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~~~~~ 52 (70)
..++.+++|||..=..+...|.+ .+..+ ++.+.++|+-+.+
T Consensus 36 ~~~~~l~lsgGstp~~~y~~L~~-------~~idw~~v~~f~~DEr~vp 77 (233)
T 3nwp_A 36 RGKASLVVSGGSTPLKLFQLLSM-------KSIDWSDVYITLADERWVE 77 (233)
T ss_dssp HSCEEEEECCSSTTHHHHHHHHH-------CCSCGGGEEEEESEEESSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHh-------cCCChhHeEEEeCeecccC
Confidence 46789999999876667666664 34565 6899999987643
No 83
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=69.37 E-value=6.1 Score=21.95 Aligned_cols=37 Identities=11% Similarity=0.206 Sum_probs=27.4
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+.+|..|..+...|++ .|+ .+..++-|+
T Consensus 54 ~~~~~ivvyC~~g~rs~~a~~~L~~---------~G~--~v~~l~GG~ 90 (100)
T 3foj_A 54 NDNETYYIICKAGGRSAQVVQYLEQ---------NGV--NAVNVEGGM 90 (100)
T ss_dssp CTTSEEEEECSSSHHHHHHHHHHHT---------TTC--EEEEETTHH
T ss_pred CCCCcEEEEcCCCchHHHHHHHHHH---------CCC--CEEEecccH
Confidence 4567888888888888888777764 577 566777765
No 84
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=69.13 E-value=3.2 Score=27.16 Aligned_cols=41 Identities=12% Similarity=-0.023 Sum_probs=32.5
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
..++|||++.|...|...+..... +. ++.+.++.++|+-..
T Consensus 6 ~~k~ILv~~D~s~~s~~al~~A~~-lA----~~~~a~l~ll~v~~~ 46 (319)
T 3olq_A 6 KYQNLLVVIDPNQDDQPALRRAVY-IV----QRNGGRIKAFLPVYD 46 (319)
T ss_dssp CSCEEEEECCTTCSCCHHHHHHHH-HH----HHHCCEEEEEEEECC
T ss_pred ccceEEEEECCCcccHHHHHHHHH-HH----HHcCCeEEEEEEecc
Confidence 457999999999999888887776 33 356789999998543
No 85
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=67.76 E-value=6.5 Score=26.41 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=32.1
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc--eEEEEEEeCCCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF--SVCAIYIDDGSIS 52 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~--~~~~v~vd~~~~~ 52 (70)
....++.|++|||..=..+...|.+..+ .+..+ ++.+.++|+-+.+
T Consensus 33 ~~~~~~~l~LsgGstP~~ly~~L~~~~~----~~idw~~~v~~f~~DEr~vp 80 (266)
T 3eb9_A 33 SQQWPLSIALAGGSTPKMTYARLHDEHL----NLLREKRALRFFMGDERMVP 80 (266)
T ss_dssp GGGCSEEEEECCSHHHHHHHHHHHHHHH----HHHTTSCCEEEEESEEESSC
T ss_pred HhCCCEEEEEcCCCCHHHHHHHHHHHhh----cCCChHHcEEEEeeeeeccC
Confidence 4567899999999777777777764222 23444 6889999987743
No 86
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=67.13 E-value=4 Score=23.72 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=24.4
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEe
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd 47 (70)
-||++++++|.-|+.+..-+++.++ +.++++.+-+++
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~-----~~gi~~~i~~~~ 41 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAK-----SKNINATIEAIA 41 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHH-----HHTCSEEEEEEC
T ss_pred eEEEEECCChHhHHHHHHHHHHHHH-----HCCCCeEEEEec
Confidence 4799999999888866666655333 345555554444
No 87
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=67.09 E-value=7.9 Score=21.20 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=25.7
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
++|++-+.+|..|..+...|++ .|++ +..++-|+
T Consensus 54 ~~ivvyC~~g~rs~~a~~~L~~---------~G~~--v~~l~GG~ 87 (94)
T 1wv9_A 54 RPLLLVCEKGLLSQVAALYLEA---------EGYE--AMSLEGGL 87 (94)
T ss_dssp SCEEEECSSSHHHHHHHHHHHH---------HTCC--EEEETTGG
T ss_pred CCEEEEcCCCChHHHHHHHHHH---------cCCc--EEEEcccH
Confidence 6788888888888877777775 4777 66777775
No 88
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=66.42 E-value=7.1 Score=21.72 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=27.2
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+.+|..|..+...|++ .|+ .+..++-|+
T Consensus 54 ~~~~~iv~yC~~g~rs~~a~~~L~~---------~G~--~v~~l~GG~ 90 (103)
T 3eme_A 54 NKNEIYYIVCAGGVRSAKVVEYLEA---------NGI--DAVNVEGGM 90 (103)
T ss_dssp CTTSEEEEECSSSSHHHHHHHHHHT---------TTC--EEEEETTHH
T ss_pred CCCCeEEEECCCChHHHHHHHHHHH---------CCC--CeEEeCCCH
Confidence 4567788888888888888777764 577 566777665
No 89
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=62.23 E-value=15 Score=21.41 Aligned_cols=38 Identities=21% Similarity=0.172 Sum_probs=25.0
Q ss_pred CeEEEEecCchhHHHH-HHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 6 DKVLVAFSGSHSSMAL-LHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 6 ~kvlva~SGG~DS~~L-l~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
.||+++++.|.-|+.| ..-+++.++ +.++++.+-+.+.
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~-----~~gi~~~V~~~~~ 60 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQ-----SHNIPVELIQCRV 60 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHH-----HTTCCEEEEEECT
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHH-----HcCCeEEEEEecH
Confidence 4799999999887775 455555333 4566655555553
No 90
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=62.07 E-value=9.3 Score=22.98 Aligned_cols=39 Identities=18% Similarity=0.176 Sum_probs=25.5
Q ss_pred CCCeEEEEecCchhHHHHH-HHHHHhhhhhhcccCCc-eEEEEEEe
Q psy3866 4 PQDKVLVAFSGSHSSMALL-HLLQEGMQLSSHKRILF-SVCAIYID 47 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll-~ll~~~l~~~~~~~~~~-~~~~v~vd 47 (70)
...||+++++.|.-|+.|+ .-+++.++ +.++ +..+-+.+
T Consensus 12 ~~kkIlvVC~sGmgTS~ml~~klkk~~~-----e~gi~~~~V~~~~ 52 (125)
T 1vkr_A 12 HVRKIIVACDAGMGSSAMGAGVLRKKIQ-----DAGLSQISVTNSA 52 (125)
T ss_dssp CCCEEEECCSSSSHHHHHHHHHHHHHHH-----HTTCTTSEEEECC
T ss_pred cccEEEEECCCcHHHHHHHHHHHHHHHH-----HCCCceEEEEEee
Confidence 3468999999999888886 45665443 3555 54444444
No 91
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=61.87 E-value=3.9 Score=23.44 Aligned_cols=34 Identities=18% Similarity=0.340 Sum_probs=24.6
Q ss_pred CeEEEEe-cCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 6 DKVLVAF-SGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 6 ~kvlva~-SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
++|++-+ .+|..|..+..+|++ .|+ .+..++-|+
T Consensus 90 ~~ivvyC~~~G~rs~~a~~~L~~---------~G~--~v~~l~GG~ 124 (134)
T 3g5j_A 90 DNIVIYCARGGMRSGSIVNLLSS---------LGV--NVYQLEGGY 124 (134)
T ss_dssp SEEEEECSSSSHHHHHHHHHHHH---------TTC--CCEEETTHH
T ss_pred CeEEEEECCCChHHHHHHHHHHH---------cCC--ceEEEeCcH
Confidence 6788877 589999888888775 467 455666654
No 92
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=61.82 E-value=3 Score=22.73 Aligned_cols=23 Identities=30% Similarity=0.381 Sum_probs=18.0
Q ss_pred CchhHHHHHHHHHHhhhhhhcccCCceE
Q psy3866 14 GSHSSMALLHLLQEGMQLSSHKRILFSV 41 (70)
Q Consensus 14 GG~DS~~Ll~ll~~~l~~~~~~~~~~~~ 41 (70)
||.||+.++.++.. +. +++|+++
T Consensus 34 g~lDSl~~velv~~-lE----~~fgi~i 56 (80)
T 1dv5_A 34 GLLDSMGTVQLLLE-LQ----SQFGVDA 56 (80)
T ss_dssp SSCCSHHHHHHHHH-HT----TTSCCCC
T ss_pred cCcChHHHHHHHHH-HH----HHhCCcC
Confidence 66999999999998 54 4677653
No 93
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=60.40 E-value=9.7 Score=24.97 Aligned_cols=40 Identities=23% Similarity=0.393 Sum_probs=29.6
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGSI 51 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~~~~ 51 (70)
..++.+++|||..=..+...|.+ .+..+ ++.+.++|+-+.
T Consensus 33 ~~~~~l~lsgGstp~~~y~~L~~-------~~i~w~~v~~f~~DEr~v 73 (232)
T 3lhi_A 33 KGGAVLAVSGGRSPIAFFNALSQ-------KDLDWKNVGITLADERIV 73 (232)
T ss_dssp HSCEEEEECCSSTTHHHHHHHHT-------SCCCGGGEEEEESEEESS
T ss_pred CCCEEEEEeCCCCHHHHHHHHHh-------cCCCchheEEEEeeeccC
Confidence 46789999999766666666653 35666 689999998764
No 94
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=57.25 E-value=5.1 Score=21.52 Aligned_cols=24 Identities=25% Similarity=0.231 Sum_probs=17.7
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCceE
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFSV 41 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~ 41 (70)
.-|.||+.++.+... +. +++|.++
T Consensus 35 dlG~DSL~~vel~~~-le----~~fgi~i 58 (83)
T 1or5_A 35 DLGYDSLALLETAAV-LQ----QRYGIAL 58 (83)
T ss_dssp HHSCCHHHHHHHHHH-HH----TTSCCCC
T ss_pred HhCCCHHHHHHHHHH-HH----HHHCCcc
Confidence 347899999999997 55 4566543
No 95
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=54.79 E-value=25 Score=23.23 Aligned_cols=43 Identities=16% Similarity=0.318 Sum_probs=30.2
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeCCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGSIS 52 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~~~~~ 52 (70)
+.+..+++|||..=..+...|.+ . ..+..+ ++.+.++|+-+.+
T Consensus 38 ~~~~~l~LsgGstP~~~y~~L~~-~----~~~idw~~v~~f~~DEr~vp 81 (248)
T 3oc6_A 38 RGQATIVLTGGGTGIGLLKRVRE-R----SGEIDWSKVHIYWGDERFVP 81 (248)
T ss_dssp HSCEEEEECCSHHHHHHHHHHHH-T----GGGSCGGGEEEEESEEECSC
T ss_pred CCCEEEEECCCccHHHHHHHHHh-h----ccCCCcceEEEEEeeeccCC
Confidence 46789999999765666666664 1 134555 6899999987643
No 96
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=54.02 E-value=11 Score=21.37 Aligned_cols=37 Identities=16% Similarity=0.239 Sum_probs=26.7
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+.+|..|..+..+|++ .|+ .+..++-|+
T Consensus 53 ~~~~~ivvyC~~G~rs~~aa~~L~~---------~G~--~v~~l~GG~ 89 (108)
T 3gk5_A 53 ERDKKYAVICAHGNRSAAAVEFLSQ---------LGL--NIVDVEGGI 89 (108)
T ss_dssp CTTSCEEEECSSSHHHHHHHHHHHT---------TTC--CEEEETTHH
T ss_pred CCCCeEEEEcCCCcHHHHHHHHHHH---------cCC--CEEEEcCcH
Confidence 3556788888888888877777664 577 566777765
No 97
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=53.39 E-value=25 Score=23.24 Aligned_cols=43 Identities=21% Similarity=0.411 Sum_probs=30.3
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeCCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGSIS 52 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~~~~~ 52 (70)
+.++.|++|||..=..+...|.+.. .+..| ++.+.++|+-+.+
T Consensus 38 ~~~~~l~LsgGstP~~~y~~L~~~~-----~~idw~~v~~f~~DEr~vp 81 (251)
T 3tx2_A 38 RGKAMIVLTGGGTGIALLKHLRDVA-----SGLDWTNVHVFWGDDRYVP 81 (251)
T ss_dssp HSCEEEEECCSHHHHHHHHHHHHHH-----TTSCGGGEEEEESEEESSC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhc-----cCCCCceeEEEeeeeccCC
Confidence 4678999999976566666666411 34555 6899999987743
No 98
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=51.65 E-value=24 Score=23.97 Aligned_cols=43 Identities=19% Similarity=0.312 Sum_probs=29.9
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGS 50 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~~~ 50 (70)
+.+..+++|||..=..+...|.+..+ ..++.+ ++.+.++|+-+
T Consensus 53 ~~~~~l~LsgGsTP~~~y~~L~~~~~---~~~idw~~v~~f~~DEr~ 96 (289)
T 3hn6_A 53 ENPFILGLPTGSSPIGMYKNLIELNK---NKKISFQNVITFNMDEYI 96 (289)
T ss_dssp TBCEEEEECCSSTTHHHHHHHHHHHH---TTSCCCTTEEEEESEEES
T ss_pred CCcEEEEECCCccHHHHHHHHHHhHh---hcCCCchheEEEeCccee
Confidence 34589999999777777777765222 134555 68899999854
No 99
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=50.22 E-value=33 Score=23.00 Aligned_cols=43 Identities=21% Similarity=0.421 Sum_probs=30.5
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeCCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGSIS 52 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~~~~~ 52 (70)
+.++.|++|||..=..+...|.+.. .+..| ++.+.++|+-+.+
T Consensus 54 ~~~~~l~LsgGstP~~~y~~L~~~~-----~~idw~~v~~f~~DEr~vp 97 (268)
T 3ico_A 54 RGQALIVLTGGGNGIALLRYLSAQA-----QQIEWSKVHLFWGDERYVP 97 (268)
T ss_dssp HSCEEEEECCSHHHHHHHHHHHHHG-----GGSCGGGEEEEESEEECSC
T ss_pred cCceEEEEecCCchhHHHHHHHHHh-----hhhhheeeEEeecccccCC
Confidence 4678999999976666666666411 34565 6899999987743
No 100
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=50.06 E-value=30 Score=20.58 Aligned_cols=37 Identities=8% Similarity=0.098 Sum_probs=25.5
Q ss_pred CCCCeEEEEecCc--hhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGS--HSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG--~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+.+| ..|..+...|++ .|++ +..++-|+
T Consensus 70 ~~~~~ivvyC~~g~~~rs~~aa~~L~~---------~G~~--v~~l~GG~ 108 (144)
T 3nhv_A 70 SKEKVIITYCWGPACNGATKAAAKFAQ---------LGFR--VKELIGGI 108 (144)
T ss_dssp CTTSEEEEECSCTTCCHHHHHHHHHHH---------TTCE--EEEEESHH
T ss_pred CCCCeEEEEECCCCccHHHHHHHHHHH---------CCCe--EEEeCCcH
Confidence 3556777777777 688877777775 5775 66677654
No 101
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=49.34 E-value=16 Score=21.06 Aligned_cols=37 Identities=16% Similarity=0.075 Sum_probs=25.3
Q ss_pred CCCCeEEEEecCchh--HHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHS--SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~D--S~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+.+|.. |..+...|++ .|++ +..++-|+
T Consensus 69 ~~~~~ivvyC~~g~r~~s~~a~~~L~~---------~G~~--v~~l~GG~ 107 (124)
T 3flh_A 69 DPAKTYVVYDWTGGTTLGKTALLVLLS---------AGFE--AYELAGAL 107 (124)
T ss_dssp CTTSEEEEECSSSSCSHHHHHHHHHHH---------HTCE--EEEETTHH
T ss_pred CCCCeEEEEeCCCCchHHHHHHHHHHH---------cCCe--EEEeCCcH
Confidence 456678888888877 6666666664 4776 66667665
No 102
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=49.28 E-value=7.4 Score=20.55 Aligned_cols=23 Identities=9% Similarity=0.182 Sum_probs=17.4
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCce
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFS 40 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~ 40 (70)
.-|.||+.++.++.+ +. +++|.+
T Consensus 36 dlG~DSl~~~~l~~~-le----~~fgi~ 58 (82)
T 2cnr_A 36 DLDVDSLSMVEVVVA-AE----ERFDVK 58 (82)
T ss_dssp TSCCCHHHHHHHHHH-HH----GGGTBC
T ss_pred ccCCChHHHHHHHHH-HH----HHhCCC
Confidence 567899999999997 55 355654
No 103
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=47.99 E-value=18 Score=20.97 Aligned_cols=38 Identities=18% Similarity=0.139 Sum_probs=26.3
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+.+|..|..+...|++ .|++ .+..++-|+
T Consensus 80 ~~~~~ivvyC~~G~rs~~aa~~L~~---------~G~~-~v~~l~GG~ 117 (129)
T 1tq1_A 80 GQSDNIIVGCQSGGRSIKATTDLLH---------AGFT-GVKDIVGGY 117 (129)
T ss_dssp CTTSSEEEEESSCSHHHHHHHHHHH---------HHCC-SEEEEECCH
T ss_pred CCCCeEEEECCCCcHHHHHHHHHHH---------cCCC-CeEEeCCcH
Confidence 4566788888888888888877775 3554 234567775
No 104
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=47.34 E-value=8.9 Score=20.28 Aligned_cols=23 Identities=9% Similarity=0.167 Sum_probs=17.5
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCce
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFS 40 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~ 40 (70)
.-|.||+.++.++.. +.+ ++|.+
T Consensus 36 dlG~DSl~~vel~~~-le~----~fgi~ 58 (81)
T 1f80_D 36 DLGADXLDVVELVME-LED----EFDME 58 (81)
T ss_dssp HSCCCHHHHHHHHHH-HHH----HTTCC
T ss_pred HcCCcHHHHHHHHHH-HHH----HhCCc
Confidence 568899999999997 553 55554
No 105
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=47.00 E-value=23 Score=20.92 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=25.3
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+.+|..|..+...|++ .|++ .+..++-|+
T Consensus 78 ~~~~~ivvyC~~G~rS~~aa~~L~~---------~G~~-~v~~l~GG~ 115 (148)
T 2fsx_A 78 QHERPVIFLCRSGNRSIGAAEVATE---------AGIT-PAYNVLDGF 115 (148)
T ss_dssp ---CCEEEECSSSSTHHHHHHHHHH---------TTCC-SEEEETTTT
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHH---------cCCc-ceEEEcCCh
Confidence 4456788888888888777777765 4664 356777776
No 106
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=44.60 E-value=10 Score=20.57 Aligned_cols=24 Identities=13% Similarity=0.283 Sum_probs=18.1
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCceE
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFSV 41 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~ 41 (70)
..|.||+.++.++.. +.+ ++|+++
T Consensus 40 dlglDSl~~vel~~~-lE~----~fgi~i 63 (88)
T 2l4b_A 40 DFNLDSLDFVDLIMS-LEE----RFSLEI 63 (88)
T ss_dssp TTTCCHHHHHHHHHH-HHH----HTTCCC
T ss_pred ccCCcHHHHHHHHHH-HHH----HHCCCc
Confidence 578999999999997 553 566543
No 107
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Probab=41.94 E-value=46 Score=22.02 Aligned_cols=46 Identities=24% Similarity=0.212 Sum_probs=31.7
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeCCCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGSIS 52 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~~~~~ 52 (70)
....+..|++|||.-=..+...|.+. . ..+..+ ++.+.++|+-+.+
T Consensus 34 ~~~~~~~l~LsgGstp~~ly~~L~~~-~---~~~i~w~~v~~f~~DEr~vp 80 (267)
T 3css_A 34 DKSVPVVLALSGGSTPKRLYEELHEK-D---LALLQQHAVQFILGDERLLS 80 (267)
T ss_dssp STTSCEEEEECCSSTTHHHHHHHHHH-S---HHHHHTTCEEEEESEEESSC
T ss_pred HhCCCEEEEEeCCCCHHHHHHHHHHh-c---ccCCChhHeEEEeeeeeccC
Confidence 34667899999998777777777652 1 112333 6889999987743
No 108
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=41.36 E-value=15 Score=25.53 Aligned_cols=45 Identities=13% Similarity=0.245 Sum_probs=30.6
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeCCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGSI 51 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~~~~ 51 (70)
....+..+++|||..=..+...|.. .+ ..+..| ++.+.++|+-+.
T Consensus 57 ~~~~~~~l~LsgGsTP~~ly~~L~~-~~---~~~idw~~V~~f~~DEr~v 102 (312)
T 3e15_A 57 KEGGHVVIGLSGGKTPIDVYKNIAL-VK---DIKIDTSKLIFFIIDERYK 102 (312)
T ss_dssp STTCCCEEEECCSHHHHHHHHHHTT-CC---SSCCCGGGCEEEESEEECC
T ss_pred hhCCCEEEEEeCCCCHHHHHHHHHH-hh---ccCCCccceEEEEeeeecC
Confidence 3456789999999766666666653 21 134555 588999998763
No 109
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=41.33 E-value=9.1 Score=20.01 Aligned_cols=19 Identities=11% Similarity=0.062 Sum_probs=15.6
Q ss_pred ecCchhHHHHHHHHHHhhhh
Q psy3866 12 FSGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 12 ~SGG~DS~~Ll~ll~~~l~~ 31 (70)
...|.||+.++.++.. +.+
T Consensus 33 ~~lG~DSl~~~~l~~~-le~ 51 (80)
T 1x3o_A 33 EDLGADSLDTVELIMG-LED 51 (80)
T ss_dssp TTTCCCHHHHHHHHHH-HHH
T ss_pred hhcCccHHHHHHHHHH-HHH
Confidence 3678999999999997 654
No 110
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=41.27 E-value=34 Score=22.40 Aligned_cols=41 Identities=17% Similarity=0.442 Sum_probs=28.4
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeCCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGSIS 52 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~~~~~ 52 (70)
..+..|++|||.-=..+...|.+ ....+ ++.+..+|+-+.+
T Consensus 44 ~~~~~l~LsgGsTp~~ly~~L~~-------~~i~w~~v~~f~~DEr~vp 85 (232)
T 1vl1_A 44 KDKIFVVLAGGRTPLPVYEKLAE-------QKFPWNRIHFFLSDERYVP 85 (232)
T ss_dssp CSCEEEEECCSTTHHHHHHHHTT-------SCCCGGGEEEEESEEESSC
T ss_pred CCCeEEEEcCCccHHHHHHHHHH-------cCCChhHEEEEeCeEeecC
Confidence 45788999999766666555543 23444 6889999987643
No 111
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=41.24 E-value=15 Score=19.73 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=17.2
Q ss_pred Cch-hHHHHHHHHHHhhhhhhcccCCceE
Q psy3866 14 GSH-SSMALLHLLQEGMQLSSHKRILFSV 41 (70)
Q Consensus 14 GG~-DS~~Ll~ll~~~l~~~~~~~~~~~~ 41 (70)
-|. ||+.++.++.. +.+ ++|+++
T Consensus 34 lg~~DSl~~~elv~~-lE~----~fgi~i 57 (83)
T 2amw_A 34 IPELDSMAVVNVITA-LEE----YFDFSV 57 (83)
T ss_dssp STTTTHHHHHHHHHH-HHH----HTTCCC
T ss_pred cCccCHHHHHHHHHH-HHH----HhCCee
Confidence 466 99999999998 553 566553
No 112
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=41.19 E-value=40 Score=17.76 Aligned_cols=25 Identities=24% Similarity=0.203 Sum_probs=19.8
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHH
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQE 27 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~ 27 (70)
.+.++|++-+.+|..|..+...|++
T Consensus 39 ~~~~~ivv~C~~g~rs~~aa~~L~~ 63 (85)
T 2jtq_A 39 DKNDTVKVYCNAGRQSGQAKEILSE 63 (85)
T ss_dssp CTTSEEEEEESSSHHHHHHHHHHHH
T ss_pred CCCCcEEEEcCCCchHHHHHHHHHH
Confidence 4567888888889888888777775
No 113
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=40.92 E-value=9.2 Score=20.20 Aligned_cols=18 Identities=11% Similarity=0.248 Sum_probs=15.1
Q ss_pred cCchhHHHHHHHHHHhhhh
Q psy3866 13 SGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~ 31 (70)
..|.||+.++.++.. +.+
T Consensus 35 dlG~DSl~~~el~~~-le~ 52 (81)
T 2lol_A 35 DLKADSLDTVELMMA-IEV 52 (81)
T ss_dssp HTTCCHHHHHHHHHH-HHH
T ss_pred hcCCcHHHHHHHHHH-HHH
Confidence 578999999999997 654
No 114
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=40.76 E-value=9.4 Score=20.39 Aligned_cols=18 Identities=11% Similarity=0.121 Sum_probs=14.8
Q ss_pred cCchhHHHHHHHHHHhhhh
Q psy3866 13 SGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~ 31 (70)
.-|.||+.++.++.. +.+
T Consensus 36 dlG~DSl~~vel~~~-le~ 53 (82)
T 2qnw_A 36 DLDADSLDSVELVMA-FEE 53 (82)
T ss_dssp HSCCCHHHHHHHHHH-HHH
T ss_pred ccCCcHHHHHHHHHH-HHH
Confidence 468899999999997 654
No 115
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=40.58 E-value=8.9 Score=19.84 Aligned_cols=19 Identities=11% Similarity=0.130 Sum_probs=15.6
Q ss_pred ecCchhHHHHHHHHHHhhhh
Q psy3866 12 FSGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 12 ~SGG~DS~~Ll~ll~~~l~~ 31 (70)
...|.||+.++.+... +.+
T Consensus 29 ~~lG~DSl~~~~l~~~-le~ 47 (77)
T 2ehs_A 29 EDLGADSLDVVELIMA-FEE 47 (77)
T ss_dssp TTTCCCHHHHHHHHHH-HHH
T ss_pred hccCCCHHHHHHHHHH-HHH
Confidence 4679999999999987 654
No 116
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=40.57 E-value=9.5 Score=20.00 Aligned_cols=18 Identities=11% Similarity=0.156 Sum_probs=15.0
Q ss_pred cCchhHHHHHHHHHHhhhh
Q psy3866 13 SGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~ 31 (70)
..|.||+.++.++.+ +.+
T Consensus 32 dlG~DSl~~~el~~~-le~ 49 (78)
T 1l0i_A 32 DLGADSLDTVELVMA-LEE 49 (78)
T ss_dssp TSCCCHHHHHHHHHH-HHH
T ss_pred hcCCCHHHHHHHHHH-HHH
Confidence 568999999999997 654
No 117
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.49 E-value=13 Score=20.82 Aligned_cols=24 Identities=13% Similarity=0.200 Sum_probs=18.1
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCceE
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFSV 41 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~ 41 (70)
.-|.||+.++.++.+ +.+ ++++++
T Consensus 44 dlG~DSL~~vel~~~-le~----~fgi~i 67 (99)
T 2dnw_A 44 DLGLDSLDQVEIIMA-MED----EFGFEI 67 (99)
T ss_dssp CCCCCHHHHHHHHHH-HHH----HTTCCC
T ss_pred hcCCCHHHHHHHHHH-HHH----HHCCCC
Confidence 568999999999998 654 556543
No 118
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=40.40 E-value=6.2 Score=21.29 Aligned_cols=25 Identities=20% Similarity=0.171 Sum_probs=18.7
Q ss_pred ecCchhHHHHHHHHHHhhhhhhcccCCceE
Q psy3866 12 FSGSHSSMALLHLLQEGMQLSSHKRILFSV 41 (70)
Q Consensus 12 ~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~ 41 (70)
..-|.||+.++.++.. +. +++|.++
T Consensus 36 ~dlG~DSL~~vel~~~-le----~~fgi~i 60 (86)
T 1af8_A 36 EDIGYDSLALMETAAR-LE----SRYGVSI 60 (86)
T ss_dssp TTTTCCTTTHHHHHHH-HT----TTTCSCC
T ss_pred hhcCCCHHHHHHHHHH-HH----HHHCCCc
Confidence 3568999999999997 54 4666553
No 119
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=40.08 E-value=9.7 Score=20.32 Aligned_cols=18 Identities=17% Similarity=0.272 Sum_probs=14.7
Q ss_pred cCchhHHHHHHHHHHhhhh
Q psy3866 13 SGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~ 31 (70)
.-|.||+.++.++.. +.+
T Consensus 34 dlg~DSl~~vel~~~-le~ 51 (81)
T 3gzm_A 34 DLGADSLDLVELIMA-LEE 51 (81)
T ss_dssp HSCCCHHHHHHHHHH-HHH
T ss_pred hcCCCHHHHHHHHHH-HHH
Confidence 458899999999998 553
No 120
>1m4y_A ATP-dependent protease HSLV; N-terminal catalytic threonine residue, hydrolase; 2.10A {Thermotoga maritima} SCOP: d.153.1.4
Probab=39.75 E-value=30 Score=21.07 Aligned_cols=25 Identities=32% Similarity=0.603 Sum_probs=20.6
Q ss_pred CCeEEEEecCc-hhHHHHHHHHHHhh
Q psy3866 5 QDKVLVAFSGS-HSSMALLHLLQEGM 29 (70)
Q Consensus 5 ~~kvlva~SGG-~DS~~Ll~ll~~~l 29 (70)
++++++++||. .|...+...++.-+
T Consensus 39 ~~~i~~~~aG~~aD~~~l~~~~~~~~ 64 (171)
T 1m4y_A 39 EGKVLAGFAGSVADAMTLFDRFEAKL 64 (171)
T ss_dssp TTTEEEEEESCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCccHHHHHHHHHHHHHHH
Confidence 67899999999 79888888877533
No 121
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=39.74 E-value=16 Score=19.46 Aligned_cols=23 Identities=4% Similarity=0.008 Sum_probs=16.7
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCce
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFS 40 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~ 40 (70)
.=|.||+.++.+... +++ .++.+
T Consensus 39 ~lG~DSL~~~~l~~~-l~~----~~g~~ 61 (89)
T 2kr5_A 39 DMGIDSLSSMVIGSR-FRE----DLGLD 61 (89)
T ss_dssp HHTCCHHHHHHHHHH-HHH----TTCCC
T ss_pred HcCccHHHHHHHHHH-HHH----HHCCC
Confidence 447899999999887 553 55554
No 122
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=38.83 E-value=14 Score=20.92 Aligned_cols=23 Identities=9% Similarity=0.050 Sum_probs=18.0
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCce
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFS 40 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~ 40 (70)
..|.||+.++.++.. +.+ ++|++
T Consensus 32 dLGlDSL~~veLi~~-lE~----~fgi~ 54 (101)
T 2kw2_A 32 DLGIDSLDFLDIAFA-IDK----AFGIK 54 (101)
T ss_dssp CCCCCHHHHHHHHHH-HHH----HTTCC
T ss_pred hcCCCHHHHHHHHHH-HHH----HHCCc
Confidence 569999999999998 653 56655
No 123
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=38.47 E-value=17 Score=20.95 Aligned_cols=24 Identities=4% Similarity=0.083 Sum_probs=18.0
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCceE
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFSV 41 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~ 41 (70)
.-|.||+.++.++.. +.+ ++|+++
T Consensus 36 dlG~DSL~~vel~~~-lE~----~fgi~i 59 (115)
T 1klp_A 36 DLDIDSLSMVEIAVQ-TED----KYGVKI 59 (115)
T ss_dssp TTCSHHHHHHHHHHH-HHH----HTCCCC
T ss_pred ccCCCHHHHHHHHHH-HHH----HHCCCC
Confidence 568999999999997 654 455543
No 124
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=38.32 E-value=35 Score=19.80 Aligned_cols=37 Identities=19% Similarity=0.125 Sum_probs=27.0
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
+..+|++-+-.|.-|.....+|++ .||+ .+.++..|+
T Consensus 73 ~~~~ivv~C~sG~RS~~aa~~L~~---------~G~~-~v~~l~GG~ 109 (134)
T 1vee_A 73 ENTTLYILDKFDGNSELVAELVAL---------NGFK-SAYAIKDGA 109 (134)
T ss_dssp GGCEEEEECSSSTTHHHHHHHHHH---------HTCS-EEEECTTTT
T ss_pred CCCEEEEEeCCCCcHHHHHHHHHH---------cCCc-ceEEecCCc
Confidence 456788888888888888777775 3665 456777776
No 125
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=37.24 E-value=56 Score=18.35 Aligned_cols=37 Identities=11% Similarity=0.238 Sum_probs=25.4
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+..+|++-+.+|.-|......|++ .||+. +++.-|+
T Consensus 54 ~~~~~ivv~C~~G~rS~~aa~~L~~---------~G~~~--~~l~GG~ 90 (103)
T 3iwh_A 54 NKNEIYYIVCAGGVRSAKVVEYLEA---------NGIDA--VNVEGGM 90 (103)
T ss_dssp CTTSEEEEECSSSSHHHHHHHHHHT---------TTCEE--EEETTHH
T ss_pred cCCCeEEEECCCCHHHHHHHHHHHH---------cCCCE--EEecChH
Confidence 4566788877788888877766664 57863 4676664
No 126
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=36.36 E-value=16 Score=20.96 Aligned_cols=24 Identities=13% Similarity=0.140 Sum_probs=18.1
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCceE
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFSV 41 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~ 41 (70)
.-|.||+.++.++.. +.+ ++|+++
T Consensus 55 dLGlDSL~~veLi~~-lE~----~fgi~i 78 (101)
T 4dxe_H 55 DLGADSLDIAELVME-LED----EFGTEI 78 (101)
T ss_dssp TSCCCHHHHHHHHHH-HHH----HTTCCC
T ss_pred hcCCCcHHHHHHHHH-HHH----HHCCCC
Confidence 468999999999998 553 566543
No 127
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=36.03 E-value=10 Score=20.30 Aligned_cols=18 Identities=17% Similarity=0.183 Sum_probs=14.9
Q ss_pred cCchhHHHHHHHHHHhhhh
Q psy3866 13 SGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~ 31 (70)
.-|.||+.++.++.. +.+
T Consensus 38 dlG~DSl~~vel~~~-le~ 55 (84)
T 2kwl_A 38 DLNADSLDIYELLYL-LEE 55 (84)
T ss_dssp TSSSCHHHHHHHHHH-HHH
T ss_pred hcCCCHHHHHHHHHH-HHH
Confidence 568999999999997 654
No 128
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=35.09 E-value=59 Score=17.95 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=25.1
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+.+|..|..+..+|++ .|++ .+..++-|+
T Consensus 50 ~~~~~ivvyc~~g~rs~~a~~~L~~---------~G~~-~v~~l~GG~ 87 (106)
T 3hix_A 50 EKSRDIYVYGAGDEQTSQAVNLLRS---------AGFE-HVSELKGGL 87 (106)
T ss_dssp CTTSCEEEECSSHHHHHHHHHHHHH---------TTCS-CEEECTTHH
T ss_pred CCCCeEEEEECCCChHHHHHHHHHH---------cCCc-CEEEecCCH
Confidence 4556788877888888888777775 4664 234455554
No 129
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=34.00 E-value=62 Score=20.44 Aligned_cols=41 Identities=20% Similarity=0.160 Sum_probs=27.5
Q ss_pred CCCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEE-eCC
Q psy3866 2 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYI-DDG 49 (70)
Q Consensus 2 i~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~v-d~~ 49 (70)
++++|+++|.-.-|.+.... ++..+ ++ +.|.++++|+= .+.
T Consensus 75 i~~~D~vii~S~Sg~n~~~i-e~A~~-ak-----e~G~~vIaITs~~~~ 116 (170)
T 3jx9_A 75 LHAVDRVLIFTPDTERSDLL-ASLAR-YD-----AWHTPYSIITLGDVT 116 (170)
T ss_dssp CCTTCEEEEEESCSCCHHHH-HHHHH-HH-----HHTCCEEEEESSCCC
T ss_pred CCCCCEEEEEeCCCCCHHHH-HHHHH-HH-----HCCCcEEEEeCcchh
Confidence 57899888866666666444 55554 33 45889888886 443
No 130
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=33.87 E-value=68 Score=18.32 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=25.4
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+.+|..|..+...|++ .|++ .+..++-|+
T Consensus 84 ~~~~~ivvyC~~G~rs~~a~~~L~~---------~G~~-~v~~l~GG~ 121 (139)
T 2hhg_A 84 QEDKKFVFYCAGGLRSALAAKTAQD---------MGLK-PVAHIEGGF 121 (139)
T ss_dssp GSSSEEEEECSSSHHHHHHHHHHHH---------HTCC-SEEEETTHH
T ss_pred CCCCeEEEECCCChHHHHHHHHHHH---------cCCC-CeEEecCCH
Confidence 3567788888888888877777765 3554 244556554
No 131
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=33.41 E-value=14 Score=21.22 Aligned_cols=23 Identities=17% Similarity=0.187 Sum_probs=17.1
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCce
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFS 40 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~ 40 (70)
.-|.||+.++.++.+ +.+ ++|++
T Consensus 52 dlGlDSL~~veLv~~-lE~----~fgI~ 74 (105)
T 2jq4_A 52 AAGLSSFASVQLMLG-IEE----AFDIE 74 (105)
T ss_dssp GGTCCHHHHHHHHHH-HHH----HHSCC
T ss_pred hcCCCHHHHHHHHHH-HHH----HHCCC
Confidence 457899999999998 553 45544
No 132
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=33.13 E-value=95 Score=19.94 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=21.6
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
.||++.+||..+. +..++.. +.+ ..+..++.+|.-+.
T Consensus 2 ~rI~vl~SG~g~~--~~~~l~~-l~~---~~~~~~i~~Vvs~~ 38 (216)
T 2ywr_A 2 LKIGVLVSGRGSN--LQAIIDA-IES---GKVNASIELVISDN 38 (216)
T ss_dssp EEEEEEECSCCHH--HHHHHHH-HHT---TSSCEEEEEEEESC
T ss_pred CEEEEEEeCCcHH--HHHHHHH-HHh---CCCCCeEEEEEeCC
Confidence 3799999997643 3344444 221 23345777776664
No 133
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=32.68 E-value=1e+02 Score=21.19 Aligned_cols=40 Identities=15% Similarity=0.250 Sum_probs=28.4
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
+..||+|-.||. .+.|-.++.. .+ .+.++.++.+|.-|+.
T Consensus 104 ~~~ri~vl~Sg~--g~nl~~ll~~-~~---~g~l~~~I~~Visn~~ 143 (302)
T 3o1l_A 104 QKKRVVLMASRE--SHCLADLLHR-WH---SDELDCDIACVISNHQ 143 (302)
T ss_dssp SCCEEEEEECSC--CHHHHHHHHH-HH---TTCSCSEEEEEEESSS
T ss_pred CCcEEEEEEeCC--chhHHHHHHH-HH---CCCCCcEEEEEEECcH
Confidence 346899999998 3456667765 32 2556789999888864
No 134
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=32.42 E-value=16 Score=19.74 Aligned_cols=23 Identities=13% Similarity=0.063 Sum_probs=16.3
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCce
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFS 40 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~ 40 (70)
.=|.||+..+.+... ++ +.++.+
T Consensus 49 ~lG~DSL~a~~l~~~-l~----~~~g~~ 71 (95)
T 2ju1_A 49 ELGFDSLAAVRLRNL-LN----AATGLR 71 (95)
T ss_dssp HHTCSSHHHHHHHHH-HG----GGTSSC
T ss_pred HcCCcHHHHHHHHHH-HH----HHHCCC
Confidence 447899999998887 54 345543
No 135
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=32.35 E-value=50 Score=21.35 Aligned_cols=45 Identities=18% Similarity=0.302 Sum_probs=27.5
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeCCCCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGSIS 52 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~~~~~ 52 (70)
+.+..|++|||.-=..+...|.+ .. ...+..+ ++.++.+|+-+.+
T Consensus 28 ~~~~~l~lsgGstp~~~~~~L~~-~~--~~~~~~w~~v~~f~~DEr~vp 73 (238)
T 1y89_A 28 GQPVHISLSGGSTPKMLFKLLAS-QP--YANDIQWKNLHFWWGDERCVA 73 (238)
T ss_dssp SSCEEEEECCSHHHHHHHHHHTS-TT--HHHHSCGGGEEEEESEEESSC
T ss_pred CCCEEEEECCCccHHHHHHHHHh-hh--hccCCChhHeEEEeceecCCC
Confidence 45788999999655555555543 00 0112444 6889999976643
No 136
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=31.70 E-value=54 Score=19.96 Aligned_cols=37 Identities=30% Similarity=0.316 Sum_probs=24.9
Q ss_pred eEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 7 KVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 7 kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
-++|++|..-.|.-++..++. .+ +.|.++.+++=+.+
T Consensus 115 DvvI~iS~SG~t~~~i~~~~~-ak-----~~g~~vI~IT~~~~ 151 (199)
T 1x92_A 115 DVLLAISTSGNSANVIQAIQA-AH-----DREMLVVALTGRDG 151 (199)
T ss_dssp CEEEEECSSSCCHHHHHHHHH-HH-----HTTCEEEEEECTTC
T ss_pred CEEEEEeCCCCCHHHHHHHHH-HH-----HCCCEEEEEECCCC
Confidence 477777776666666777765 33 46888888876543
No 137
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=31.53 E-value=60 Score=19.34 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=25.0
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
+-++|++|..-.+.-++..++. .+ +.|.++.+++=+.+
T Consensus 97 ~d~vI~iS~sG~t~~~~~~~~~-ak-----~~g~~vi~IT~~~~ 134 (183)
T 2xhz_A 97 QDVVIAISNSGESSEITALIPV-LK-----RLHVPLICITGRPE 134 (183)
T ss_dssp TCEEEEECSSSCCHHHHHHHHH-HH-----TTTCCEEEEESCTT
T ss_pred CCEEEEEeCCCCCHHHHHHHHH-HH-----HCCCCEEEEECCCC
Confidence 3467777766566666667765 33 46788888887643
No 138
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=31.35 E-value=13 Score=21.03 Aligned_cols=24 Identities=8% Similarity=0.097 Sum_probs=18.0
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCceE
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFSV 41 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~ 41 (70)
.-|.||+.++.++.. +.+ ++|+++
T Consensus 51 dLGlDSL~~vel~~~-lE~----~fgi~i 74 (97)
T 3ejb_A 51 DLGADSLDTVELVMA-LEE----EFDTEI 74 (97)
T ss_dssp TTCCCTTHHHHHHHH-HHH----HTTCCC
T ss_pred hcCCCHHHHHHHHHH-HHH----HHCCCC
Confidence 468999999999998 553 566543
No 139
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=31.27 E-value=1.1e+02 Score=20.63 Aligned_cols=39 Identities=21% Similarity=0.239 Sum_probs=28.0
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
..||+|-.||.- +.|-.++.. .+ .+.++.++.+|.-|+.
T Consensus 90 ~~ri~vl~Sg~g--~~l~~ll~~-~~---~g~l~~~i~~Visn~~ 128 (286)
T 3n0v_A 90 RPKVVIMVSKAD--HCLNDLLYR-QR---IGQLGMDVVAVVSNHP 128 (286)
T ss_dssp CCEEEEEESSCC--HHHHHHHHH-HH---TTSSCCEEEEEEESSS
T ss_pred CcEEEEEEeCCC--CCHHHHHHH-HH---CCCCCcEEEEEEeCcH
Confidence 458999999983 456667765 32 2556789999888875
No 140
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=31.27 E-value=16 Score=20.92 Aligned_cols=19 Identities=11% Similarity=0.053 Sum_probs=15.4
Q ss_pred ecCchhHHHHHHHHHHhhhh
Q psy3866 12 FSGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 12 ~SGG~DS~~Ll~ll~~~l~~ 31 (70)
-.-|.||+.++.++.. +.+
T Consensus 44 ~dLGlDSL~~veL~~~-LE~ 62 (100)
T 1vku_A 44 KELGFDSIDVIDLVMF-FED 62 (100)
T ss_dssp TTTTCCHHHHHHHHHH-HHH
T ss_pred HHcCCchHHHHHHHHH-HHH
Confidence 3568999999999997 654
No 141
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=31.14 E-value=61 Score=19.41 Aligned_cols=38 Identities=8% Similarity=-0.085 Sum_probs=24.8
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
+-++|++|-.-.+.-++..++. .+ +.|.++.+++=+.+
T Consensus 88 ~d~~i~iS~sG~t~~~~~~~~~-ak-----~~g~~vi~IT~~~~ 125 (187)
T 3sho_A 88 TDLMIGVSVWRYLRDTVAALAG-AA-----ERGVPTMALTDSSV 125 (187)
T ss_dssp TEEEEEECCSSCCHHHHHHHHH-HH-----HTTCCEEEEESCTT
T ss_pred CCEEEEEeCCCCCHHHHHHHHH-HH-----HCCCCEEEEeCCCC
Confidence 4477777766555556666665 33 45888888886544
No 142
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=30.64 E-value=14 Score=20.68 Aligned_cols=22 Identities=18% Similarity=0.119 Sum_probs=16.4
Q ss_pred CchhHHHHHHHHHHhhhhhhcccCCce
Q psy3866 14 GSHSSMALLHLLQEGMQLSSHKRILFS 40 (70)
Q Consensus 14 GG~DS~~Ll~ll~~~l~~~~~~~~~~~ 40 (70)
-|.||+.++.++.+ +.+ .+|.+
T Consensus 37 lG~DSL~~vel~~~-le~----~fgi~ 58 (95)
T 1nq4_A 37 LGYDSLALLNTVGR-IER----DYGVQ 58 (95)
T ss_dssp HTCCSHHHHHHHHH-HHH----HTCCC
T ss_pred hCCCHHHHHHHHHH-HHH----HHCCc
Confidence 47899999999998 553 45544
No 143
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=30.60 E-value=7.4 Score=20.72 Aligned_cols=23 Identities=4% Similarity=0.096 Sum_probs=17.2
Q ss_pred cCchhHHHHHHHHHHhhhhhhcccCCce
Q psy3866 13 SGSHSSMALLHLLQEGMQLSSHKRILFS 40 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~~~~~~~~~~ 40 (70)
.-|.||+.++.++.. +.+ ++|++
T Consensus 33 dlG~DSl~~vel~~~-le~----~fgi~ 55 (82)
T 2ava_A 33 KLGADSLDTVEIVMN-LEE----EFGIN 55 (82)
T ss_dssp CCTTCCSCHHHHHHH-HHH----HTTCC
T ss_pred hcCCCHHHHHHHHHH-HHH----HHCCc
Confidence 457899999999997 553 55654
No 144
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=30.52 E-value=58 Score=19.69 Aligned_cols=37 Identities=22% Similarity=0.235 Sum_probs=24.4
Q ss_pred eEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 7 KVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 7 kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
-++|++|..-.|.-++..++. .+ +.|.++.+++=+.+
T Consensus 111 DvvI~iS~SG~t~~~i~~~~~-ak-----~~g~~vI~IT~~~~ 147 (196)
T 2yva_A 111 DVLLAISTRGNSRDIVKAVEA-AV-----TRDMTIVALTGYDG 147 (196)
T ss_dssp CEEEEECSSSCCHHHHHHHHH-HH-----HTTCEEEEEECTTC
T ss_pred CEEEEEeCCCCCHHHHHHHHH-HH-----HCCCEEEEEeCCCC
Confidence 367777766566666677765 33 46888888876543
No 145
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=30.45 E-value=59 Score=19.48 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=23.1
Q ss_pred eEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 7 KVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 7 kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
-++|++|..-.+.-++..++. .+ +.|.++.+++=+.
T Consensus 81 d~vI~iS~sG~t~~~~~~~~~-ak-----~~g~~vi~IT~~~ 116 (186)
T 1m3s_A 81 DLVIIGSGSGETKSLIHTAAK-AK-----SLHGIVAALTINP 116 (186)
T ss_dssp CEEEEECSSSCCHHHHHHHHH-HH-----HTTCEEEEEESCT
T ss_pred CEEEEEcCCCCcHHHHHHHHH-HH-----HCCCEEEEEECCC
Confidence 367777766555556666665 33 4578888887654
No 146
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=30.20 E-value=67 Score=18.45 Aligned_cols=25 Identities=0% Similarity=0.020 Sum_probs=19.2
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHH
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQE 27 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~ 27 (70)
.+.++|++-+.+|..|..+...|++
T Consensus 89 ~~~~~ivvyC~~G~rs~~aa~~L~~ 113 (139)
T 3d1p_A 89 DSAKELIFYCASGKRGGEAQKVASS 113 (139)
T ss_dssp CTTSEEEEECSSSHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCCchHHHHHHHHHH
Confidence 3567888888889988888777764
No 147
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=30.11 E-value=91 Score=20.01 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=23.5
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
.||.|-+||..+. +..++.. +.+ +.++.++.+|.-|+
T Consensus 4 ~ki~vl~sG~g~~--~~~~l~~-l~~---~~l~~~I~~Vit~~ 40 (212)
T 3av3_A 4 KRLAVFASGSGTN--FQAIVDA-AKR---GDLPARVALLVCDR 40 (212)
T ss_dssp EEEEEECCSSCHH--HHHHHHH-HHT---TCCCEEEEEEEESS
T ss_pred cEEEEEEECCcHH--HHHHHHH-HHh---CCCCCeEEEEEeCC
Confidence 4899999998654 3344544 321 34467887777664
No 148
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=29.85 E-value=74 Score=18.53 Aligned_cols=38 Identities=18% Similarity=0.180 Sum_probs=25.6
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+.+|..|..+...|++ .|++ .+..++-|+
T Consensus 80 ~~~~~ivvyC~~G~rS~~aa~~L~~---------~G~~-~v~~l~GG~ 117 (137)
T 1qxn_A 80 DPEKPVVVFCKTAARAALAGKTLRE---------YGFK-TIYNSEGGM 117 (137)
T ss_dssp CTTSCEEEECCSSSCHHHHHHHHHH---------HTCS-CEEEESSCH
T ss_pred CCCCeEEEEcCCCcHHHHHHHHHHH---------cCCc-ceEEEcCcH
Confidence 4566788877788888877777765 4664 345666665
No 149
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=29.21 E-value=64 Score=19.25 Aligned_cols=38 Identities=21% Similarity=0.259 Sum_probs=24.3
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
+-++|++|-.-.|.-++..++. .+ +.|.++.+++=+.+
T Consensus 111 ~Dvvi~iS~sG~t~~~~~~~~~-ak-----~~g~~vi~iT~~~~ 148 (188)
T 1tk9_A 111 KDVLIGISTSGKSPNVLEALKK-AK-----ELNMLCLGLSGKGG 148 (188)
T ss_dssp TCEEEEECSSSCCHHHHHHHHH-HH-----HTTCEEEEEEEGGG
T ss_pred CCEEEEEeCCCCCHHHHHHHHH-HH-----HCCCEEEEEeCCCC
Confidence 3466777765555556666665 33 45888888887644
No 150
>1g3k_A ATP-dependent protease HSLV; hydrolase; 1.90A {Haemophilus influenzae} SCOP: d.153.1.4 PDB: 1g3i_G 1jjw_A 1kyi_G* 1ofh_G* 1ofi_G* 1e94_A* 1g4a_B* 1g4b_M 1hqy_A* 1ht1_C* 1ht2_A* 1ned_A
Probab=28.55 E-value=59 Score=19.80 Aligned_cols=23 Identities=30% Similarity=0.647 Sum_probs=19.1
Q ss_pred CCeEEEEecCc-hhHHHHHHHHHH
Q psy3866 5 QDKVLVAFSGS-HSSMALLHLLQE 27 (70)
Q Consensus 5 ~~kvlva~SGG-~DS~~Ll~ll~~ 27 (70)
.+++++++||. .|...+...++.
T Consensus 39 ~~~i~~~~aG~~aD~~~l~~~~~~ 62 (174)
T 1g3k_A 39 NGKVLAGFAGGTADAFTLFELFER 62 (174)
T ss_dssp TTTEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCccHHHHHHHHHHHHH
Confidence 68899999999 788888777655
No 151
>3g23_A Peptidase U61, LD-carboxypeptidase A; flavodoxin-like fold, catalytic triad, merops S66 unassigned peptidases family; HET: MSE; 1.89A {Novosphingobium aromaticivorans}
Probab=28.40 E-value=31 Score=23.25 Aligned_cols=22 Identities=23% Similarity=0.273 Sum_probs=16.5
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHH
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQE 27 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~ 27 (70)
+.+.|++++|| |-++|+..+.+
T Consensus 95 ~~~PK~~~GyS---DiTaL~~al~~ 116 (274)
T 3g23_A 95 AASAKQYLGYS---DAGTLLAALYA 116 (274)
T ss_dssp GGGGCEEEECG---GGHHHHHHHHH
T ss_pred hhCCcEEEEec---hHHHHHHHHHH
Confidence 35678898888 88888766654
No 152
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=28.13 E-value=1.4e+02 Score=20.29 Aligned_cols=39 Identities=21% Similarity=0.245 Sum_probs=27.8
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
..||+|-.||.- +.|-.++.. .+ .+.++.++.+|.-|+.
T Consensus 95 ~~ri~vl~Sg~g--~~l~~ll~~-~~---~g~l~~~i~~Visn~~ 133 (292)
T 3lou_A 95 RPKVLIMVSKLE--HCLADLLFR-WK---MGELKMDIVGIVSNHP 133 (292)
T ss_dssp CCEEEEEECSCC--HHHHHHHHH-HH---HTSSCCEEEEEEESSS
T ss_pred CCEEEEEEcCCC--cCHHHHHHH-HH---cCCCCcEEEEEEeCcH
Confidence 468999999983 456667765 32 2567789988888875
No 153
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=27.95 E-value=72 Score=18.97 Aligned_cols=36 Identities=25% Similarity=0.328 Sum_probs=22.5
Q ss_pred eEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 7 KVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 7 kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
-+++++|.+-.+.-++..++. . ++.|.++.+++-+.
T Consensus 84 d~vi~iS~sG~t~~~~~~~~~-a-----k~~g~~vi~IT~~~ 119 (180)
T 1jeo_A 84 DLLILISGSGRTESVLTVAKK-A-----KNINNNIIAIVCEC 119 (180)
T ss_dssp CEEEEEESSSCCHHHHHHHHH-H-----HTTCSCEEEEESSC
T ss_pred CEEEEEeCCCCcHHHHHHHHH-H-----HHCCCcEEEEeCCC
Confidence 366667655555555566664 3 24688888888654
No 154
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=27.33 E-value=55 Score=23.07 Aligned_cols=47 Identities=21% Similarity=0.304 Sum_probs=17.8
Q ss_pred EEEecCchhHHHHHHHHHHhhhhhhcccCCceEE--EEEEeCCCCCcCcccccCccccccCC
Q psy3866 9 LVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVC--AIYIDDGSISQVSKSKLNPNFGSVCP 68 (70)
Q Consensus 9 lva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~--~v~vd~~~~~~~~~~~~~~~~~~~c~ 68 (70)
+|++|||.=-..+|.-|++ +..++. +-+-|.|- |-..+-..|+-.||
T Consensus 13 IVvigGGtGl~~ll~gLk~---------~~~~iTaIVtvaDDGG----SSG~lR~~~g~~~p 61 (341)
T 2p0y_A 13 IVVIGGGTGLPVVLNGLRK---------QAVDITAVVTVADDGG----SSGIIRNYVNVVPP 61 (341)
T ss_dssp EEEECCGGGHHHHHHHHHH---------SSSEEEEECC------------------------
T ss_pred EEEECCcccHHHHHHHHHh---------CCCCeEEEEECCcCCc----cceeHHhhcCCCCC
Confidence 5789999888777766665 334443 33344443 23344455665665
No 155
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=26.94 E-value=16 Score=19.81 Aligned_cols=18 Identities=6% Similarity=-0.049 Sum_probs=13.8
Q ss_pred cCchhHHHHHHHHHHhhhh
Q psy3866 13 SGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~ 31 (70)
.=|.||+.++.+... +++
T Consensus 49 ~lG~DSl~~~~l~~~-l~~ 66 (99)
T 2liu_A 49 DLGLDSIVGVEWTTT-INQ 66 (99)
T ss_dssp HHTCCHHHHHHHHHH-HHH
T ss_pred HhCccHHHHHHHHHH-HHH
Confidence 347899999988886 553
No 156
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=26.68 E-value=75 Score=19.11 Aligned_cols=40 Identities=23% Similarity=0.280 Sum_probs=24.7
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
.++| ++|++|-+-.+.-++..++. .+ +.|.++.+++=+.+
T Consensus 115 ~~~d-~vI~iS~SG~t~~~~~~~~~-ak-----~~g~~vI~IT~~~~ 154 (198)
T 2xbl_A 115 NEGD-VLIGYSTSGKSPNILAAFRE-AK-----AKGMTCVGFTGNRG 154 (198)
T ss_dssp CTTC-EEEEECSSSCCHHHHHHHHH-HH-----HTTCEEEEEECSCC
T ss_pred CCCC-EEEEEeCCCCCHHHHHHHHH-HH-----HCCCeEEEEECCCC
Confidence 3444 67777765555556666665 33 35788888876544
No 157
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=32.57 E-value=14 Score=21.29 Aligned_cols=26 Identities=12% Similarity=0.043 Sum_probs=18.8
Q ss_pred ecCchhHHHHHHHHHHhhhhhhcccCCceEE
Q psy3866 12 FSGSHSSMALLHLLQEGMQLSSHKRILFSVC 42 (70)
Q Consensus 12 ~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~ 42 (70)
..-|.||+.++.++.. +. +++++++.
T Consensus 53 ~dLGlDSL~~veL~~~-lE----~~fgi~i~ 78 (103)
T 2lte_A 53 EDLAFDSLVVSELSLK-LR----KEFGVTGV 78 (103)
Confidence 4568899999999987 54 45665543
No 158
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=26.55 E-value=24 Score=24.24 Aligned_cols=22 Identities=27% Similarity=0.336 Sum_probs=17.6
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHH
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQE 27 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~ 27 (70)
+.+.|++++|| |-++|+..+..
T Consensus 104 ~~~PK~~~GyS---DiT~L~~al~~ 125 (327)
T 4h1h_A 104 SENPKILCGFS---DITALATAIYT 125 (327)
T ss_dssp HHSCCEEEECT---THHHHHHHHHH
T ss_pred ccCCeEEEecc---cccHHHHHHHH
Confidence 45679999999 99998877764
No 159
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=26.23 E-value=57 Score=20.16 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=24.5
Q ss_pred eEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 7 KVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 7 kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
-++|++|..-.+.-++.++.. .+ +.|.++.++|-+..
T Consensus 91 DvvI~iS~SG~t~~~i~~~~~-ak-----~~g~~vI~IT~~~~ 127 (200)
T 1vim_A 91 DVLVGISGSGETTSVVNISKK-AK-----DIGSKLVAVTGKRD 127 (200)
T ss_dssp CEEEEECSSSCCHHHHHHHHH-HH-----HHTCEEEEEESCTT
T ss_pred CEEEEEeCCCCcHHHHHHHHH-HH-----HCCCeEEEEECCCC
Confidence 477777776666666667665 33 35788888886643
No 160
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=26.23 E-value=96 Score=18.18 Aligned_cols=26 Identities=15% Similarity=0.287 Sum_probs=19.4
Q ss_pred CCCCCeEEEEecCchhHHHHHHHHHH
Q psy3866 2 MRPQDKVLVAFSGSHSSMALLHLLQE 27 (70)
Q Consensus 2 i~~~~kvlva~SGG~DS~~Ll~ll~~ 27 (70)
+.+.++|++-+.+|..|..+...|++
T Consensus 53 l~~~~~ivvyC~~g~rs~~aa~~L~~ 78 (141)
T 3ilm_A 53 LEKSRDIYVYGAGDEQTSQAVNLLRS 78 (141)
T ss_dssp SCTTSEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEECCChHHHHHHHHHHH
Confidence 34567788888888888877777765
No 161
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=25.73 E-value=75 Score=17.61 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=25.1
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+|++-+.+|..|......|.+ +-- ...+|+. .+..++-|+
T Consensus 73 ~~ivv~C~~G~rs~~a~~~L~~-~gg--~~~~G~~-~v~~l~GG~ 113 (127)
T 3i2v_A 73 VPIYVICKLGNDSQKAVKILQS-LSA--AQELDPL-TVRDVVGGL 113 (127)
T ss_dssp EEEEEECSSSSHHHHHHHHHHH-HHH--TTSSSCE-EEEEETTHH
T ss_pred CeEEEEcCCCCcHHHHHHHHHH-hhc--cccCCCc-eEEEecCCH
Confidence 4788888888888888777776 100 0123443 455666665
No 162
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=25.50 E-value=32 Score=23.83 Aligned_cols=22 Identities=23% Similarity=0.301 Sum_probs=17.7
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHH
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQE 27 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~ 27 (70)
+.+.|++++|| |-++|+..+..
T Consensus 104 ~~~PK~~~GyS---DiTaL~~al~~ 125 (331)
T 4e5s_A 104 RENPKFFCGYS---DITALNNAIYT 125 (331)
T ss_dssp HTSCCEEEECG---GGHHHHHHHHH
T ss_pred HhCCeEEEEec---chHHHHHHHHH
Confidence 45689999999 99999876663
No 163
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=25.05 E-value=80 Score=20.32 Aligned_cols=38 Identities=11% Similarity=0.103 Sum_probs=26.8
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+-+|..|..+...|++ .|++ .+..++-|+
T Consensus 228 ~~~~~ivv~C~~G~rs~~a~~~L~~---------~G~~-~v~~~~GG~ 265 (280)
T 1urh_A 228 SYDKPIIVSCGSGVTAAVVLLALAT---------LDVP-NVKLYDGAW 265 (280)
T ss_dssp CSSSCEEEECCSSSTHHHHHHHHHH---------TTCS-SCEEECCSC
T ss_pred CCCCCEEEECChHHHHHHHHHHHHH---------cCCC-CceeeCChH
Confidence 3456788888888888888777775 4664 345667776
No 164
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=24.77 E-value=13 Score=19.66 Aligned_cols=18 Identities=22% Similarity=0.135 Sum_probs=14.1
Q ss_pred cCchhHHHHHHHHHHhhhh
Q psy3866 13 SGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~ 31 (70)
.=|-||+.++.+..+ +++
T Consensus 42 ~lG~DSl~~~~l~~~-l~~ 59 (88)
T 2afd_A 42 NYDLNSSKALILLGR-LEK 59 (88)
T ss_dssp GTTCCSTHHHHHHHH-HHH
T ss_pred HcCccHHHHHHHHHH-HHH
Confidence 457899999998887 553
No 165
>2kjs_A Putative acyl carrier protein; alpha, ACP, PNS, structural genomics, PSI-2, protein structure initiative; HET: PNS; NMR {Geobacter metallireducens gs-15} PDB: 2lml_A* 2kwm_A*
Probab=24.44 E-value=25 Score=19.55 Aligned_cols=17 Identities=12% Similarity=0.411 Sum_probs=14.2
Q ss_pred CchhHHHHHHHHHHhhhh
Q psy3866 14 GSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 14 GG~DS~~Ll~ll~~~l~~ 31 (70)
-|-||+..+.++.+ +.+
T Consensus 32 lg~DSL~~veli~~-ie~ 48 (87)
T 2kjs_A 32 DAWDSLSHMNLIVS-LEV 48 (87)
T ss_dssp SCCCHHHHHHHHHH-HHH
T ss_pred CCCChHHHHHHHHH-HHH
Confidence 48899999999998 554
No 166
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=23.80 E-value=26 Score=20.66 Aligned_cols=18 Identities=22% Similarity=0.364 Sum_probs=15.0
Q ss_pred cCchhHHHHHHHHHHhhhh
Q psy3866 13 SGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~ 31 (70)
..|.||+.++.++.. +.+
T Consensus 54 dLGlDSLd~veLi~~-LEe 71 (113)
T 2cgq_A 54 DLGFDSLKLFQLITE-LED 71 (113)
T ss_dssp TTCCCHHHHHHHHHH-HHH
T ss_pred hcCCCHHHHHHHHHH-HHH
Confidence 468999999999998 654
No 167
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=23.74 E-value=27 Score=20.15 Aligned_cols=17 Identities=0% Similarity=0.110 Sum_probs=14.2
Q ss_pred CchhHHHHHHHHHHhhhh
Q psy3866 14 GSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 14 GG~DS~~Ll~ll~~~l~~ 31 (70)
-|.||+.++.++.. +.+
T Consensus 53 LglDSL~~veli~~-lE~ 69 (107)
T 3ce7_A 53 RLWDCLDTVEFVLD-VEE 69 (107)
T ss_dssp SBCCHHHHHHHHHH-HHH
T ss_pred cCCCHHHHHHHHHH-HHH
Confidence 48999999999998 553
No 168
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=23.57 E-value=1.6e+02 Score=19.20 Aligned_cols=37 Identities=27% Similarity=0.254 Sum_probs=23.2
Q ss_pred CeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeC
Q psy3866 6 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 48 (70)
Q Consensus 6 ~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~ 48 (70)
-||++.+||..+. +..++.. +.+ ...+.++.+|.-|.
T Consensus 23 ~rI~~l~SG~g~~--~~~~l~~-l~~---~~~~~~I~~Vvt~~ 59 (229)
T 3auf_A 23 IRIGVLISGSGTN--LQAILDG-CRE---GRIPGRVAVVISDR 59 (229)
T ss_dssp EEEEEEESSCCHH--HHHHHHH-HHT---TSSSEEEEEEEESS
T ss_pred cEEEEEEeCCcHH--HHHHHHH-HHh---CCCCCeEEEEEcCC
Confidence 4899999998643 3445554 321 33467887777664
No 169
>2z3b_A ATP-dependent protease HSLV; N-terminal nucleophIle hydrolase; 2.50A {Bacillus subtilis} SCOP: d.153.1.4 PDB: 2z3a_A 1yyf_D* 3ty6_A
Probab=23.47 E-value=81 Score=19.39 Aligned_cols=25 Identities=28% Similarity=0.555 Sum_probs=19.9
Q ss_pred CCeEEEEecCc-hhHHHHHHHHHHhh
Q psy3866 5 QDKVLVAFSGS-HSSMALLHLLQEGM 29 (70)
Q Consensus 5 ~~kvlva~SGG-~DS~~Ll~ll~~~l 29 (70)
.+++++++||. .|...+...++.-+
T Consensus 45 ~~~i~~~~aG~~aD~~~l~~~~~~~~ 70 (180)
T 2z3b_A 45 NGKVLAGFAGSVADAFTLFEKFEAKL 70 (180)
T ss_dssp TTTEEEEECSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHHH
Confidence 67899999998 78888887776533
No 170
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=23.44 E-value=27 Score=24.23 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=17.5
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHH
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQE 27 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~ 27 (70)
+.+.|++++|| |-++|+..+..
T Consensus 105 ~~~PK~~~GyS---DiTaL~~al~~ 126 (336)
T 3sr3_A 105 QNNPKIMIGYS---DATALLLGIYA 126 (336)
T ss_dssp HHSCCEEEECG---GGHHHHHHHHH
T ss_pred hhCCeEEEEec---hHHHHHHHHHH
Confidence 34678999998 99999877764
No 171
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=23.42 E-value=1.6e+02 Score=19.05 Aligned_cols=41 Identities=15% Similarity=0.271 Sum_probs=26.5
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCc-eEEEEEEeC
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDD 48 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~-~~~~v~vd~ 48 (70)
.....|++|||.-=..+...|.+..+ ..+..+ ++.++.+|+
T Consensus 32 ~~~~~i~lsgGsTp~~~~~~L~~~~~---~~~~~~~~v~v~~ldE 73 (266)
T 1fs5_A 32 DRPFVLGLPTGGTPMTTYKALVEMHK---AGQVSFKHVVTFNMDE 73 (266)
T ss_dssp SSCEEEEECCSSTTHHHHHHHHHHHH---TTSCCCTTEEEEESEE
T ss_pred cCceEEEEcCCCCHHHHHHHHHHHhh---cCCCChHHeEEEeCee
Confidence 44678999999766666666654111 122333 688999997
No 172
>1jy2_P Fibrinogen gamma-B chain; fragment E, disulfide bonds, asymmetry, coiled- coil, beta-sheet, blood clotting; 1.40A {Bos taurus} SCOP: h.1.8.1 PDB: 1jy3_P 2a45_I*
Probab=23.12 E-value=15 Score=19.21 Aligned_cols=11 Identities=55% Similarity=1.147 Sum_probs=8.7
Q ss_pred cCccccccCCC
Q psy3866 59 LNPNFGSVCPY 69 (70)
Q Consensus 59 ~~~~~~~~c~~ 69 (70)
++.-|||-||-
T Consensus 11 ~d~rFGsYCPT 21 (48)
T 1jy2_P 11 LDERFGSYCPT 21 (48)
T ss_dssp SBTTTBCEEEC
T ss_pred ccccccCcCCc
Confidence 56779999984
No 173
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=22.92 E-value=1.6e+02 Score=20.72 Aligned_cols=30 Identities=13% Similarity=0.142 Sum_probs=22.9
Q ss_pred CCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEE
Q psy3866 5 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 44 (70)
Q Consensus 5 ~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v 44 (70)
..+++ -|=+|.++..|..++.. +||++.++
T Consensus 204 ~~rL~-IfGAGhva~ala~~a~~---------lg~~V~v~ 233 (386)
T 2we8_A 204 RPRML-VFGAIDFAAAVAQQGAF---------LGYRVTVC 233 (386)
T ss_dssp CCEEE-EECCSTHHHHHHHHHHH---------TTCEEEEE
T ss_pred CCEEE-EECCCHHHHHHHHHHHh---------CCCEEEEE
Confidence 34444 48899999999999886 68887765
No 174
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=22.69 E-value=30 Score=19.92 Aligned_cols=22 Identities=23% Similarity=0.323 Sum_probs=16.5
Q ss_pred Cch-hHHHHHHHHHHhhhhhhcccCCce
Q psy3866 14 GSH-SSMALLHLLQEGMQLSSHKRILFS 40 (70)
Q Consensus 14 GG~-DS~~Ll~ll~~~l~~~~~~~~~~~ 40 (70)
-|. ||+.++.++.. +.+ +++++
T Consensus 56 LGl~DSL~~veLi~~-lE~----~FgI~ 78 (105)
T 2lki_A 56 IPELDSMAVVNVITA-LEE----YFDFS 78 (105)
T ss_dssp BTTCCHHHHHHHHHH-HHH----HHTSC
T ss_pred cCcccHHHHHHHHHH-HHH----HhCCC
Confidence 466 99999999998 553 45554
No 175
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=22.57 E-value=52 Score=19.58 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=20.7
Q ss_pred CCeEEEEecCchh---------HHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 5 QDKVLVAFSGSHS---------SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 5 ~~kvlva~SGG~D---------S~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.++|+|-+.+|.+ |..++..|. ..|++ +..++-|+
T Consensus 93 ~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~---------~~G~~--v~~L~GG~ 136 (158)
T 3tg1_B 93 SKEIIVYDENTNEPSRVMPSQPLHIVLESLK---------REGKE--PLVLKGGL 136 (158)
T ss_dssp TSCEEEECSCCSCTTSCCSSSHHHHHHHHHH---------TTTCC--EEEETTHH
T ss_pred CCeEEEEECCCCcccccCcchHHHHHHHHHH---------hCCCc--EEEeCCcH
Confidence 4577777777743 544544444 35775 45667665
No 176
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=22.37 E-value=1.1e+02 Score=16.75 Aligned_cols=25 Identities=20% Similarity=0.122 Sum_probs=18.5
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHH
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQE 27 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~ 27 (70)
.+.++|++-+..|..|..+...|++
T Consensus 56 ~~~~~ivvyc~~g~rs~~a~~~L~~ 80 (108)
T 1gmx_A 56 DFDTPVMVMCYHGNSSKGAAQYLLQ 80 (108)
T ss_dssp CTTSCEEEECSSSSHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHH
Confidence 4556778777778888887777775
No 177
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=22.21 E-value=75 Score=20.14 Aligned_cols=35 Identities=20% Similarity=0.132 Sum_probs=23.8
Q ss_pred eEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEe
Q psy3866 7 KVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 47 (70)
Q Consensus 7 kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd 47 (70)
-++|++|..-.+--++.+++. .+ +.|.++.+++=+
T Consensus 110 Dv~I~iS~SG~t~~~i~~~~~-Ak-----~~G~~vI~IT~~ 144 (243)
T 3cvj_A 110 DVIMIISNSGRNTVPVEMAIE-SR-----NIGAKVIAMTSM 144 (243)
T ss_dssp CEEEEECSSCCSHHHHHHHHH-HH-----HHTCEEEEEECH
T ss_pred CEEEEEeCCCCCHHHHHHHHH-HH-----HCCCEEEEEeCC
Confidence 377778776666666677765 33 457888888765
No 178
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=21.90 E-value=77 Score=19.68 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=23.6
Q ss_pred eEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCC
Q psy3866 7 KVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49 (70)
Q Consensus 7 kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~ 49 (70)
-++|++|-.-.|.-++..++. .+ +.|.++.+++=+.+
T Consensus 133 DvvI~iS~SG~t~~~i~~~~~-ak-----~~G~~vIaIT~~~~ 169 (212)
T 2i2w_A 133 DVLLGISTSGNSANVIKAIAA-AR-----EKGMKVITLTGKDG 169 (212)
T ss_dssp CEEEEECSSSCCHHHHHHHHH-HH-----HHTCEEEEEEETTC
T ss_pred CEEEEEECCCCCHHHHHHHHH-HH-----HCCCeEEEEECCCC
Confidence 467777765555555666665 33 35888888887643
No 179
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=21.90 E-value=1.4e+02 Score=18.59 Aligned_cols=42 Identities=14% Similarity=0.131 Sum_probs=32.9
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
...-.+|.+||..|-....-++... ....|.++.+.+.-.|+
T Consensus 4 ~~kl~II~~sG~~dka~~a~ilA~~-----AaA~G~eV~iFfTf~Gl 45 (160)
T 3pnx_A 4 NKKMNLLLFSGDYDKALASLIIANA-----AREMEIEVTIFCAFWGL 45 (160)
T ss_dssp TCEEEEEECCCCHHHHHHHHHHHHH-----HHHTTCEEEEEECGGGG
T ss_pred CCcEEEEEecCCHHHHHHHHHHHHH-----HHHcCCCEEEEEeehhH
Confidence 4456788999999998888787763 23578999998888776
No 180
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=20.44 E-value=94 Score=22.26 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=27.5
Q ss_pred CCCCeEEEEecCchhHHHHHHHHHHhhhhhhcccCCceEEEEEEeCCC
Q psy3866 3 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 50 (70)
Q Consensus 3 ~~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~~~~~~~~v~vd~~~ 50 (70)
.+.++|++-+.+|..|.....+|++ .|++ +..++-|+
T Consensus 539 ~~~~~iv~~C~~g~rs~~a~~~l~~---------~G~~--v~~l~GG~ 575 (588)
T 3ics_A 539 PVDKDIYITCQLGMRGYVAARMLME---------KGYK--VKNVDGGF 575 (588)
T ss_dssp CSSSCEEEECSSSHHHHHHHHHHHH---------TTCC--EEEETTHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHHHH---------cCCc--EEEEcchH
Confidence 3456788888888889888777775 5787 66677665
No 181
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=20.18 E-value=1.1e+02 Score=19.15 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=24.5
Q ss_pred CCCeEEEEecCchhHHHHHHHHHHhhhhhhccc--CCceEEEEEEeC
Q psy3866 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR--ILFSVCAIYIDD 48 (70)
Q Consensus 4 ~~~kvlva~SGG~DS~~Ll~ll~~~l~~~~~~~--~~~~~~~v~vd~ 48 (70)
++| ++|++|..-.+.-++..++. . ++ .|.++.+|+=+.
T Consensus 106 ~~D-lvI~iS~SG~t~~~i~~~~~-a-----k~~~~Ga~vI~IT~~~ 145 (220)
T 3etn_A 106 END-LLLLISNSGKTREIVELTQL-A-----HNLNPGLKFIVITGNP 145 (220)
T ss_dssp TTC-EEEEECSSSCCHHHHHHHHH-H-----HHHCTTCEEEEEESCT
T ss_pred CCC-EEEEEcCCCCCHHHHHHHHH-H-----HhcCCCCeEEEEECCC
Confidence 444 67777766556666666665 3 24 688888888553
No 182
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=20.02 E-value=44 Score=20.88 Aligned_cols=18 Identities=11% Similarity=0.093 Sum_probs=14.4
Q ss_pred cCchhHHHHHHHHHHhhhh
Q psy3866 13 SGSHSSMALLHLLQEGMQL 31 (70)
Q Consensus 13 SGG~DS~~Ll~ll~~~l~~ 31 (70)
.=|.||+.++.+..+ +++
T Consensus 54 ~lG~DSl~~~el~~~-l~~ 71 (212)
T 2l22_A 54 ELGLDSVIAAQWIRE-INK 71 (212)
T ss_dssp HHTCCHHHHHHHHHH-HHH
T ss_pred HhCCcHHHHHHHHHH-HHH
Confidence 448899999999987 654
Done!