Your job contains 1 sequence.
>psy3866
MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLN
PNFGSVCPYA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3866
(70 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q28ES8 - symbol:ctu2 "Cytoplasmic tRNA 2-thiola... 107 3.8e-05 1
ZFIN|ZDB-GENE-040801-79 - symbol:ctu2 "cytosolic thiourid... 100 0.00020 1
UNIPROTKB|Q08B12 - symbol:ctu2-a "Cytoplasmic tRNA 2-thio... 98 0.00035 1
UNIPROTKB|Q32NV1 - symbol:ctu2-b "Cytoplasmic tRNA 2-thio... 98 0.00035 1
>UNIPROTKB|Q28ES8 [details] [associations]
symbol:ctu2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 GO:GO:0034227 CTD:348180
HOVERGEN:HBG107783 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 HOGENOM:HOG000007287 GeneTree:ENSGT00390000008797
EMBL:CR762362 EMBL:BC089700 EMBL:BC167302 EMBL:BC170700
EMBL:BC170702 RefSeq:NP_001034829.1 UniGene:Str.6323
ProteinModelPortal:Q28ES8 Ensembl:ENSXETT00000024569 GeneID:548371
KEGG:xtr:548371 Xenbase:XB-GENE-5732028 InParanoid:Q5FVY8
Bgee:Q28ES8 Uniprot:Q28ES8
Length = 516
Score = 107 (42.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNF 63
P +KVL+AFSG SS A++ +QEGM + K++ F ++ID+G+ +S + N
Sbjct: 68 PGEKVLLAFSGGPSSSAMVQQVQEGMSRDAPKKLRFVPGILFIDEGTTCGMSHEERQQNM 127
Query: 64 GSV 66
V
Sbjct: 128 SEV 130
>ZFIN|ZDB-GENE-040801-79 [details] [associations]
symbol:ctu2 "cytosolic thiouridylase subunit 2
homolog (S. pombe)" species:7955 "Danio rerio" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0034227 "tRNA thio-modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0002098 "tRNA
wobble uridine modification" evidence=ISS] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
UniPathway:UPA00988 ZFIN:ZDB-GENE-040801-79 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 CTD:348180
HOVERGEN:HBG107783 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 HOGENOM:HOG000007287 OrthoDB:EOG4QRH41
EMBL:BC078233 IPI:IPI00499495 RefSeq:NP_001003560.1
UniGene:Dr.80746 ProteinModelPortal:Q6DC53 PRIDE:Q6DC53
GeneID:445166 KEGG:dre:445166 InParanoid:Q6DC53 NextBio:20831928
ArrayExpress:Q6DC53 Uniprot:Q6DC53
Length = 501
Score = 100 (40.3 bits), Expect = 0.00020, P = 0.00020
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 49
PQ+KVL+A SG +S +L +QEG+ + K++ F +YIDDG
Sbjct: 70 PQEKVLLAVSGGAASCTMLSQVQEGLSRDAPKKLRFMPGIVYIDDG 115
>UNIPROTKB|Q08B12 [details] [associations]
symbol:ctu2-a "Cytoplasmic tRNA 2-thiolation protein 2 A"
species:8355 "Xenopus laevis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
GO:GO:0034227 EMBL:BC097664 EMBL:BC124921 RefSeq:NP_001167511.1
UniGene:Xl.3616 ProteinModelPortal:Q08B12 GeneID:100381163
KEGG:xla:100381163 CTD:348180 Xenbase:XB-GENE-6466467
HOVERGEN:HBG107783 KO:K14169 InterPro:IPR019407 Pfam:PF10288
Uniprot:Q08B12
Length = 512
Score = 98 (39.6 bits), Expect = 0.00035, P = 0.00035
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNF 63
P +KVL+A+SG SS A++ +QEG+ + K++ F ++ID+G+ +S +
Sbjct: 68 PGEKVLLAYSGGPSSSAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQIL 127
Query: 64 GSVC 67
+C
Sbjct: 128 SEIC 131
>UNIPROTKB|Q32NV1 [details] [associations]
symbol:ctu2-b "Cytoplasmic tRNA 2-thiolation protein 2 B"
species:8355 "Xenopus laevis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
GO:GO:0034227 HOVERGEN:HBG107783 InterPro:IPR019407 Pfam:PF10288
EMBL:BC070752 EMBL:BC108465 UniGene:Xl.85791
ProteinModelPortal:Q32NV1 Xenbase:XB-GENE-5732109 Uniprot:Q32NV1
Length = 512
Score = 98 (39.6 bits), Expect = 0.00035, P = 0.00035
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 4 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSKSKLNPNF 63
P +KVL+A+SG SS A++ +QEG+ + K++ F ++ID+G+ +S +
Sbjct: 68 PGEKVLLAYSGGPSSSAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQIL 127
Query: 64 GSVC 67
+C
Sbjct: 128 SEIC 131
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.132 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 70 70 0.00091 102 3 11 22 0.42 28
29 0.41 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 461 (49 KB)
Total size of DFA: 81 KB (2064 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.10u 0.19s 8.29t Elapsed: 00:00:00
Total cpu time: 8.10u 0.19s 8.29t Elapsed: 00:00:00
Start: Thu Aug 15 14:23:06 2013 End: Thu Aug 15 14:23:06 2013