BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3867
(521 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|405976867|gb|EKC41346.1| Cytoplasmic tRNA 2-thiolation protein 2 [Crassostrea gigas]
Length = 702
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 260/476 (54%), Gaps = 40/476 (8%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
++ C +C +V R+ D +CK C + Y+ HKFRAA+GKSK++R + VLV SG +
Sbjct: 245 ERTCMKCE-KKAVLVTRVNDAFCKECFMVYVTHKFRAAIGKSKLIRDGESVLVGVSGGQA 303
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDS 178
S LLHL+QEG+ +HK++ F ++ID+G+ +S ER AN Q+ M+ F
Sbjct: 304 SSCLLHLIQEGLSGRAHKKLRFKPGLVFIDEGATIGMSAEERLANCTQVLEIMEKTGFPC 363
Query: 179 YFTCLEQALEPD-----NMKLYTDVAEL-------PLEQFAK-DSEINKMFQTVTTLSSR 225
Y LEQA+E + N TD A + L ++ K + E+ + ++ ++S++
Sbjct: 364 YLKALEQAMELEREAVTNTADQTDTASMTSVEDLTKLHRYDKAEEELRALMDSLKSVSAK 423
Query: 226 QYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRT 285
+ L+++LR +L+ A K +K+ + T LA +++ +I+ G+GAHV +D F+D+R
Sbjct: 424 EDLIKSLRHKILIDLALKKGYSKVMLGDCSTRLAVRLLTDIAQGRGAHVAMDTAFADNRC 483
Query: 286 GDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFP 345
DI +RP+RDFSSKEV +NI N++ V +P + T + S++ E FVT LQ +P
Sbjct: 484 NDITIVRPIRDFSSKEVAMFNILNNVPSVFIPRITTKVYSV-SIEHLTERFVTGLQAEYP 542
Query: 346 STVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQ 405
ST S + RT +KL + S + N C +C+APLDT +SS++ A RFS VS +
Sbjct: 543 STTSNIMRTGEKLHTEKKSSS-ENQCAICQAPLDTDVP-SSSALSAVRFSETVS-----R 595
Query: 406 LSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRT 465
S V +S S D A D +T S+ E G D G + K++R
Sbjct: 596 CSSVTLSIFSTDTACDGGGD--KTCQSEGQKESECCGRGD-------GSCQSKESKLTR- 645
Query: 466 EDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
D ++ +LCYAC+ ++KD+ + + IL Q + +M+ +I DFLL
Sbjct: 646 ------DEVESALCYACRLLIKDLGDVSKLPKHILDDISQRQRRTKMKSEIEDFLL 695
>gi|443701547|gb|ELT99947.1| hypothetical protein CAPTEDRAFT_223722 [Capitella teleta]
Length = 452
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 249/480 (51%), Gaps = 64/480 (13%)
Query: 56 SFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF 115
S S D+ C +C+ V++R+ D +CK C LQY HKFR+A GKS+++R +++VLVA
Sbjct: 17 SSSLRDRKCMKCSNEETVVIIRINDAFCKDCFLQYCTHKFRSAFGKSRLIRDKEQVLVAH 76
Query: 116 SGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAM-- 173
SG +S A+LHL+QEG +HK++ FS ++IDDG +++ ERKA NAQ+ +
Sbjct: 77 SGGPASCAMLHLIQEGTSRRAHKKLRFSSVLVFIDDGVFHGLTLVERKARNAQVLKQLIS 136
Query: 174 KYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDS------------EINKMFQTVTT 221
D + +EQ + + + LP++ + DS ++ + T+
Sbjct: 137 SGLDVHAYAIEQVMSTTS----SASLGLPVQAVSADSFEILCSFDSECKQLEALLAATTS 192
Query: 222 LSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFS 281
+SRQ L LRQ LL+Q A + K+ + T LA ++++N++ G+GAH+ D+ F+
Sbjct: 193 DTSRQSLQHVLRQRLLIQVANGMGINKVLLGNSTTSLAVQMMSNVAQGRGAHLLYDMSFA 252
Query: 282 DDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQ 341
D R+ + +RP+R+F++ E+ +Y + N L + V S L+ FV LQ
Sbjct: 253 DLRSTSVTFVRPMREFTTHEIEHYLLLNQLGTIDVISTGP-----KGLEGLTSDFVLGLQ 307
Query: 342 TNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
+FP+TVST+ RT +K+ + + ++++ C LC+APLDT SS++ AT+FS VS
Sbjct: 308 ADFPNTVSTIMRTGEKIGVSHSEIDIDLCCSLCQAPLDTDVG-PSSALAATQFSEVVSRG 366
Query: 402 TREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEK 461
R+ +S+ +++ + G D +S
Sbjct: 367 NRQ--------------SSRCSSEATECCGQGDGSCQS---------------------- 390
Query: 462 VSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ E PD L+RSLCY C+ + KD+ + + LQ K+ EM I++FL+
Sbjct: 391 ---STRCELPD-LRRSLCYGCRLMCKDLKDTSLLPASVQSNALQVKNRAEMRASIQNFLI 446
>gi|57525867|ref|NP_001003560.1| cytoplasmic tRNA 2-thiolation protein 2 [Danio rerio]
gi|82182163|sp|Q6DC53.1|CTU2_DANRE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|50417844|gb|AAH78233.1| Zgc:101113 [Danio rerio]
Length = 501
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 276/535 (51%), Gaps = 88/535 (16%)
Query: 35 CSKEQVLNGDEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK 94
C E+ NG E + I V S ++ C +C +++R+ D +C++C +Y HK
Sbjct: 2 CQVEEDYNGLECNQEKIPV----SGLNRKCMKCKEGTAVLIIRVSDAFCRSCFKEYFIHK 57
Query: 95 FRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 154
FRA LGK++++ PQ+KVL+A SG +S +L +QEG+ + K++ F +YIDDG
Sbjct: 58 FRAMLGKNRVIFPQEKVLLAVSGGAASCTMLSQVQEGLSRDAPKKLRFMPGIVYIDDGGA 117
Query: 155 SQVSISERKANNAQIA-----TAMKYF----------------------DSYFTCLEQAL 187
S ER+ + +Q+ T YF D C +QA+
Sbjct: 118 CGRSEDERQTSISQLKNIFTQTGFPYFIVPLEKVFSLPTSVLVPGTFDPDPSNPCYKQAV 177
Query: 188 EP---DNMKLYTD-----VAELPLEQFAKDSE----INKMFQTVTTLSSRQYLLQTLRQN 235
+ + KL + VA+L LE A E + ++F ++ TLS++Q +LQTLRQ+
Sbjct: 178 DKYLKEKQKLREEEAVCAVAQLNLEDSAYLPEHKLALQRLFSSLKTLSAKQEMLQTLRQH 237
Query: 236 LLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLR 295
L+L A++ + +K+ E+ + LA K+++NI+LG+GA + D GFSD R GD++ +RP+R
Sbjct: 238 LILHVARENSYSKVMMGESCSRLAVKLLSNIALGRGAALASDTGFSDPRFGDVVIVRPMR 297
Query: 296 DFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTA 355
D+SSKE+ +YN + V +P L T + AS+Q+ ESFVT+LQ +FPSTVST++RT+
Sbjct: 298 DYSSKEITFYNRMFHVPSVFIPGLDTKSHDKASIQRLTESFVTNLQADFPSTVSTIYRTS 357
Query: 356 DKLSL------DLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHV 409
+KL T + CLLC LDT AD AS+ + + EQLS +
Sbjct: 358 EKLHTVRPPQSQSTEPEPASKCLLCLCALDTTADKASA---------FHATLISEQLSQL 408
Query: 410 IISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSED---IPNQIVNGMQYTPNEKVSRTE 466
+ GS D+ V GS D + +Q +++ +
Sbjct: 409 RLQE-----------------GSVDL----VAGSSDQCCVEDQTCGTSGCCSSKRTPVQQ 447
Query: 467 DNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
D L+ LCY+C+ VKDM + + IL + + + ++M+ +I ++LL
Sbjct: 448 D------LKTLLCYSCRLTVKDMAAVNTLPPYILTEAEKRQRRSQMKVEISEYLL 496
>gi|432950093|ref|XP_004084384.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Oryzias
latipes]
Length = 486
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 251/485 (51%), Gaps = 56/485 (11%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C V++R D YC++C +Y HKFRA LGK++++ P +KVL+A SG SS A
Sbjct: 24 CVKCKEEQAAVLIRAGDPYCRSCFREYFTHKFRAMLGKTRLIFPGEKVLLAVSGGPSSSA 83
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFT 181
+L +Q+G+ S+ K++ F ++ID+G +S+ ER+ +++ + F +
Sbjct: 84 MLSQVQQGLGQSAQKKLRFLPGLVHIDEGGALGLSLGERQRLVSELKAIFQTSGFPFHVI 143
Query: 182 CLEQALE----------------PDNMKLYTDVAEL--------PLEQFAKDSEINKMFQ 217
LEQ L+ PD K D EL P A+ + ++
Sbjct: 144 PLEQVLDLPTSAVNTTPPSSDRAPDCYKAAGDGGELQQGGALAEPSVHEAQTRSLQQLLG 203
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLD 277
+ TTL++++ LL+TLRQ+LL+ A+ +K+ E+ T LA +++ +SLG+GAH+ D
Sbjct: 204 SATTLTAKEELLRTLRQHLLVHEARTRGYSKLLLGESCTRLAVRLLTCVSLGRGAHLAQD 263
Query: 278 VGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFV 337
GFSD R GD+ +RP+R+FS+KE+ YN + V +PSL T AS+Q+ +ESFV
Sbjct: 264 TGFSDCRFGDVTFVRPMREFSAKEIAVYNHMFRVPTVVIPSLETKTLEKASIQRLSESFV 323
Query: 338 TDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSR 396
+ LQ +FPSTVST++RT++KL + + CLLC LDT A AS+ +R
Sbjct: 324 SRLQQDFPSTVSTIYRTSEKLQTAGGGCCEEDGRCLLCLCSLDTAAGKASALQ-----AR 378
Query: 397 YVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQY 456
+S Q + E A + + GS +V S + P +
Sbjct: 379 LISEQLCCQKPAGTVKVEPSPPAGPCCSSADGECGS--AAGGAVCCSSEAPEK------- 429
Query: 457 TPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQI 516
+LQ+ LCY+CQ ++DM+S + + IL + + K + M+D+I
Sbjct: 430 ---------------KDLQKLLCYSCQLTLRDMSSVAHLPQYILTEAQRRKRRSLMKDEI 474
Query: 517 RDFLL 521
+FLL
Sbjct: 475 SEFLL 479
>gi|410900400|ref|XP_003963684.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Takifugu
rubripes]
Length = 586
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 262/519 (50%), Gaps = 69/519 (13%)
Query: 52 RVVFSFS-----RADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR 106
R++F F+ K C +C VV+R D YC+ C +Y HKFRA LGK++++
Sbjct: 84 RLMFYFTLLKTTSISKKCLKCKELTAAVVIRAGDPYCRDCFKEYFIHKFRAMLGKNRVIF 143
Query: 107 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANN 166
P +KVL+A SG SS ++L +Q+G+ ++HK++ F ++ID+G S+ ER+
Sbjct: 144 PGEKVLLAVSGGPSSCSMLSQVQQGLSQNAHKKLRFVPGIVFIDEGGAVGQSVEERRKTV 203
Query: 167 AQIATAMKY--FDSYFTCLEQALE---------PDNMKLYTDVAELPLEQFAKDSE---- 211
A++ T K F + LEQ L P + + + +++F + +
Sbjct: 204 AELQTVFKATGFPFHIVPLEQVLALPSEVITTVPPSSQRTASAYKAAVDKFTNEFKFIGE 263
Query: 212 --------------------------INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLN 245
+ ++ + TL++RQ LL TLRQ+LL+ A+
Sbjct: 264 SSNSRATEQEEKETLFPDVPESETQLLQQLISSAKTLTARQDLLNTLRQHLLVHTARTEG 323
Query: 246 CTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYY 305
+K+ + T LA K++ +ISLG+GA + D GF+D R GD+I ++P+RD+S+KE+ YY
Sbjct: 324 YSKLMLGDHCTRLAIKLLTSISLGRGAQLAQDTGFADLRFGDVIMVKPMRDYSAKEIAYY 383
Query: 306 NIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSM 365
N + V P+L T AS+Q+ ESFVT LQ +FPSTVST++RT++KL
Sbjct: 384 NHMFSVPTVFTPNLETKTTEKASIQRLTESFVTKLQADFPSTVSTIYRTSEKLQTVAKGS 443
Query: 366 NVNNT---CLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKV 422
+ + CLLC LDT + A S+ AT S +S + S I S +P+ A+
Sbjct: 444 STGHQCDRCLLCMCSLDTDVEKA-SAFKATLISEQLSRTKSPRASSTNIQSPNPEMAA-- 500
Query: 423 TTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYAC 482
Q S++ ++D + +G + K T D L+ LCY+C
Sbjct: 501 --TAGQCCSSEE--------AKDC-GSVASGEGCCSSAKTPETTD------LKSLLCYSC 543
Query: 483 QYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ +KDM+S + + IL + + + + M ++I DFLL
Sbjct: 544 RLTMKDMSSMERLPPYILLEAQRRQRRSRMREEIGDFLL 582
>gi|193650171|ref|XP_001946547.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 A-like
[Acyrthosiphon pisum]
Length = 438
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/472 (30%), Positives = 248/472 (52%), Gaps = 72/472 (15%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C +G VVL+ K +YCK C + + HKFRA +GKSK++ ++VLV SGS SS++
Sbjct: 25 CRKCLIEDGNVVLQKKFVYCKTCFVPMVTHKFRATVGKSKLVNRGERVLVCVSGSQSSVS 84
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISE-RKANNAQIATAMKYFDSYFTC 182
LLH++ G+Q S++KR+ F +YID+ + + + +K + Y F+
Sbjct: 85 LLHMIWTGLQQSTYKRLTFEPVVLYIDESVLHDYPLDQVKKIKELFEKYGLTYHIVKFSA 144
Query: 183 ---LEQALEPD-NMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLL 238
L+ L D N+ Y D ++ +F ++ L+ ++ +L LR+ +
Sbjct: 145 AVYLDNCLNKDTNVDQYND-------------KLQNIFNNLSDLTLKEDMLMKLRKRAIT 191
Query: 239 QAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFS----DDRTGDIITLRPL 294
+ A L CT+I TAE + L+ ++++N++LG+G+ + LD+G + ++ ++T+RP+
Sbjct: 192 KLADLLKCTRIMTAENEHKLSIRLLSNVALGRGSQISLDIGLAVNNKNNNNTSLVTIRPM 251
Query: 295 RDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRT 354
R+ S+KE+ YY +FN L + T S+QK E FV DLQ +FPSTVST+FRT
Sbjct: 252 RNLSAKEISYYALFNKLDDFMHSNFLTATSEDESIQKTTERFVNDLQVDFPSTVSTIFRT 311
Query: 355 ADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSE 414
+K+S +++ CLLC+ ++ SS+M AT++S+YVS + L +
Sbjct: 312 GEKISEKTSAIAY---CLLCQGIMEVNVS-PSSAMEATKYSKYVSLMGVKALKLSL---- 363
Query: 415 SPDHASKVTTDVNQTVGSQDIPEKSVNG-----SEDIPNQIVNGMQYTPNEKVSRTEDNE 469
+ + +++ EK+ NG +D+ +I+
Sbjct: 364 -------------KELKNEETNEKNCNGCKCRNKQDLKEKII------------------ 392
Query: 470 GPDNLQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
SLCYAC ++++++ S D+ E IL K + +ME+QI+DFLL
Sbjct: 393 ------ESLCYACTHIIQELESLDDLPEEILNKEKERLQFKKMEEQIKDFLL 438
>gi|47125206|gb|AAH70752.1| LOC431806 protein [Xenopus laevis]
Length = 518
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 263/520 (50%), Gaps = 97/520 (18%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K+C +C ++ +++R D +CK+C +Y HKFRA LGK++++ P +KVL+A+SG SS
Sbjct: 29 KICMKCKESSAALLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAYSGGPSS 88
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDD------------------------------ 151
A++ +QEG+ + K++ F ++ID+
Sbjct: 89 SAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQILSEICSVLQQTKIPFH 148
Query: 152 -----------GSISQVSISERKANNAQ-----IATAMKYFDSYFTCLEQALE------P 189
GS+ Q E++ N + + + D+ + + + LE P
Sbjct: 149 IVSLEQVFSLPGSVLQRGAPEQRPNYKEEVDRFLVQEREQGDAGCSEMLERLEVTDSDSP 208
Query: 190 DNM-KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
+ K+Y P + + ++ ++F + TL+++Q LL TLR +L+L A+ +K
Sbjct: 209 GSSDKMYQSTCSRPPDMHTQ--KLKQLFASAKTLTAKQQLLHTLRSHLILHIARTCGYSK 266
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T E+ T L+ ++++N+SLG+GA +PLD GF D R GD+ +RP+R++SSKE+ YYN F
Sbjct: 267 VMTGESCTRLSIRLLSNVSLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSSKEIAYYNRF 326
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN-- 366
++ P+ +P+L T A +S+Q E FV LQ +FPSTVST++RT++KL++ + +
Sbjct: 327 FNVLPIFIPALDTKASENSSIQHLTEVFVNRLQADFPSTVSTLYRTSEKLNVSIIDADQE 386
Query: 367 --VNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTT 424
+ CLLC +PLDT+A AS+ FS AT QLSH +
Sbjct: 387 TCAKDRCLLCLSPLDTQAGKASA------FS-----AT--QLSHHL-------------- 419
Query: 425 DVNQTVGSQDIPEKS---VNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYA 481
SQ IP KS N S+ Q G + ++ + P + LCY+
Sbjct: 420 -------SQKIPMKSNDLANNSDKSCCQGGQGCKEPGYGDTCQSRALQTP-SFVHMLCYS 471
Query: 482 CQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
C+ VKDM S + + +L + EM +I++FLL
Sbjct: 472 CRLTVKDMQSLDVLPQYVLHEAEYRCHRTEMRKEIQEFLL 511
>gi|89886161|ref|NP_001034829.1| cytoplasmic tRNA 2-thiolation protein 2 [Xenopus (Silurana)
tropicalis]
gi|123892781|sp|Q28ES8.1|CTU2_XENTR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|89269899|emb|CAJ83521.1| novel protein [Xenopus (Silurana) tropicalis]
gi|189441975|gb|AAI67302.1| hypothetical LOC548371 [Xenopus (Silurana) tropicalis]
gi|213624140|gb|AAI70700.1| hypothetical LOC548371 [Xenopus (Silurana) tropicalis]
gi|213625482|gb|AAI70702.1| hypothetical LOC548371 [Xenopus (Silurana) tropicalis]
Length = 516
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 247/523 (47%), Gaps = 100/523 (19%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K C +C ++ +++R D +CK+C +Y HKFRA LGK++++ P +KVL+AFSG SS
Sbjct: 23 KTCMKCKESSAVLLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAFSGGPSS 82
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSY 179
A++ +QEGM + K++ F ++ID+G+ +S ER+ N +++ ++ F Y
Sbjct: 83 SAMVQQVQEGMSRDAPKKLRFVPGILFIDEGTTCGMSHEERQQNMSEVQNVLQQTGFPFY 142
Query: 180 FTCLEQALEPDNMKLYTDVAELP-------------------------LEQFAK------ 208
LEQ L V E LE AK
Sbjct: 143 IVSLEQVFSLPGSILQRGVPEQRANYKQEVDRFMVQQQAQGETGCSDILENLAKLGVNVS 202
Query: 209 --DSEINKMFQT-------------------VTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
E +KMFQ+ TL+++ LL TLR +L+L A+ +
Sbjct: 203 ESSRESDKMFQSTCRHPPDTHTQKLIQLFASAKTLTAKHQLLHTLRSHLILHIARTCGYS 262
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
K+ + E+ T L+ +++NISLG+GA +PLD GF D R GD+ +RP+R++S KE+ +YN
Sbjct: 263 KVMSGESCTRLSVSLLSNISLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSLKEIAFYNR 322
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN- 366
+S V +P+L T +S+Q+ +E F+ LQ +FPSTVSTV+RT++KL++ N
Sbjct: 323 LFHVSSVFIPALNTKVLENSSIQQLSEVFINRLQADFPSTVSTVYRTSEKLNVSKIDANQ 382
Query: 367 ---VNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVT 423
CLLC +PLDT+ A S+ AT+ S Y+S K+
Sbjct: 383 GTCAKERCLLCLSPLDTQVGEA-SAFHATQISHYISQ--------------------KIL 421
Query: 424 TDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRS-----L 478
N P S S + G Y D P LQ L
Sbjct: 422 MKFND-------PANSSGKSCCQEGKCCKGPGYG---------DFCQPRALQAPSFVDML 465
Query: 479 CYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
CY C+ VKD+ S + + +L + EM +I +FLL
Sbjct: 466 CYGCRLTVKDLQSLDALPQYVLHEAEHRSRRIEMRKEIEEFLL 508
>gi|332373848|gb|AEE62065.1| unknown [Dendroctonus ponderosae]
Length = 402
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 197/355 (55%), Gaps = 21/355 (5%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C N+ ++LR KD YCKAC L NHKF+A LGKSK++ P+D+VL+A H +M+
Sbjct: 29 CNKCRENDPVILLRKKDAYCKACFLAGANHKFKALLGKSKLIHPKDRVLIACETGHPTMS 88
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCL 183
LLHLL+ G+ L++ K++ F +Y++D + +R + T+ F +
Sbjct: 89 LLHLLRSGLDLNTQKKLRFEPVLVYVEDNYHMSIGERQRIIRSINNETSRLKFPLHLVSF 148
Query: 184 EQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKK 243
++ N+ + L ++N MF ++R+ LL +++N+LL AK+
Sbjct: 149 ADSINRKNVLISQKSLAL---NRCDQGKVNAMFDQSINKTNRRQLLHIMKRNILLTVAKQ 205
Query: 244 LNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVI 303
LNC IFT E D+A+ ++ NI+LG+G+ VP D GF D R ++ LRPLR+F KE+
Sbjct: 206 LNCKYIFTPELSMDIASSLLTNIALGRGSQVPDDTGFCDGRDSEVKILRPLRNFDMKELA 265
Query: 304 YYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLT 363
YN+F+ L PV V D +S+Q F+ DLQ N+P+T++TV +T DKL+L+ +
Sbjct: 266 MYNVFHKLEPVSVNPAQI--DQYSSVQDLMSYFIIDLQENYPATITTVVKTGDKLALNQS 323
Query: 364 SMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDH 418
+ V C LC++ + R SS +TRFS+ SN E PDH
Sbjct: 324 MIAVQ--CKLCQSAI-LRNSKGLSSAESTRFSKLTSN-------------ELPDH 362
>gi|291290957|ref|NP_001167511.1| cytoplasmic tRNA 2-thiolation protein 2 A [Xenopus laevis]
gi|123884208|sp|Q08B12.1|CTU2A_XENLA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2 A
gi|115528674|gb|AAI24922.1| Unknown (protein for MGC:154644) [Xenopus laevis]
Length = 512
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 263/520 (50%), Gaps = 97/520 (18%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K+C +C ++ +++R D +CK+C +Y HKFRA LGK++++ P +KVL+A+SG SS
Sbjct: 23 KICMKCKESSAALLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAYSGGPSS 82
Query: 122 MALLHLLQEGMQLSSHKRILF----------SVCAIYIDD-------------------- 151
A++ +QEG+ + K++ F + C + ++
Sbjct: 83 SAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQILSEICSVLQQTKIPFH 142
Query: 152 -----------GSISQVSISERKANNAQ-----IATAMKYFDSYFTCLEQALE------P 189
GS+ Q E++ N + + + D+ + + + LE P
Sbjct: 143 IVSLEQVFSLPGSVLQRGAPEQRPNYKEEVDRFLVQEREQGDAGCSEMLERLEVTDSDSP 202
Query: 190 DNM-KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
+ K+Y P + + ++ ++F + TL+++Q LL TLR +L+L A+ +K
Sbjct: 203 GSSDKMYQSTCSHPPDMHTQ--KLKQLFASAKTLTAKQQLLHTLRSHLILHIARTCGYSK 260
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T E+ T L+ ++++N+SLG+GA +PLD GF D R GD+ +RP+R++SSKE+ YYN F
Sbjct: 261 VMTGESCTRLSIRLLSNVSLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSSKEIAYYNRF 320
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN-- 366
++SP+ +P+L T A +S+Q E FV LQ +FPSTVST++RT++KL++ +
Sbjct: 321 FNVSPIFIPALDTKASENSSIQHLTEVFVNRLQADFPSTVSTLYRTSEKLNVSKIDADQE 380
Query: 367 --VNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTT 424
+ CLLC +PLDT+A AS+ FS AT QLSH +
Sbjct: 381 TCAKDRCLLCLSPLDTQAGKASA------FS-----AT--QLSHHL-------------- 413
Query: 425 DVNQTVGSQDIPEKS---VNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYA 481
SQ IP KS N S+ Q G + ++ + P + LCY+
Sbjct: 414 -------SQKIPMKSNDLANNSDKSCCQGGQGCKEAGYGDTCQSRALQTP-SFVHMLCYS 465
Query: 482 CQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
C+ VKDM S + + +L + EM +I++FLL
Sbjct: 466 CRLTVKDMQSLDVLPQYVLHEAEHRCHRTEMRKEIQEFLL 505
>gi|66911532|gb|AAH97664.1| Unknown (protein for IMAGE:6633620), partial [Xenopus laevis]
Length = 522
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 260/519 (50%), Gaps = 95/519 (18%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K+C +C ++ +++R D +CK+C +Y HKFRA LGK++++ P +KVL+A+SG SS
Sbjct: 33 KICMKCKESSAALLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAYSGGPSS 92
Query: 122 MALLHLLQEGMQLSSHKRILF----------SVCAIYIDD-------------------- 151
A++ +QEG+ + K++ F + C + ++
Sbjct: 93 SAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQILSEICSVLQQTKIPFH 152
Query: 152 -----------GSISQVSISERKANNAQ-----IATAMKYFDSYFTCLEQALE------P 189
GS+ Q E++ N + + + D+ + + + LE P
Sbjct: 153 IVSLEQVFSLPGSVLQRGAPEQRPNYKEEVDRFLVQEREQGDAGCSEMLERLEVTDSDSP 212
Query: 190 DNM-KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
+ K+Y P + + ++ ++F + TL+++Q LL TLR +L+L A+ +K
Sbjct: 213 GSSDKMYQSTCSHPPDMHTQ--KLKQLFASAKTLTAKQQLLHTLRSHLILHIARTCGYSK 270
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T E+ T L+ ++++N+SLG+GA +PLD GF D R GD+ +RP+R++SSKE+ YYN F
Sbjct: 271 VMTGESCTRLSIRLLSNVSLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSSKEIAYYNRF 330
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN-- 366
++SP+ +P+L T A +S+Q E FV LQ +FPSTVST++RT++KL++ +
Sbjct: 331 FNVSPIFIPALDTKASENSSIQHLTEVFVNRLQADFPSTVSTLYRTSEKLNVSKIDADQE 390
Query: 367 --VNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTT 424
+ CLLC +PLDT+A AS+ FS AT QLSH +
Sbjct: 391 TCAKDRCLLCLSPLDTQAGKASA------FS-----AT--QLSHHL-------------- 423
Query: 425 DVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEG--PDNLQRSLCYAC 482
SQ IP KS + + + G Q T + + LCY+C
Sbjct: 424 -------SQKIPMKSNDLANNSDKSCCQGGQGCKEAGYGDTCQSRALQTHSFVHMLCYSC 476
Query: 483 QYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ VKDM S + + +L + EM +I++FLL
Sbjct: 477 RLTVKDMQSLDVLPQYVLHEAEHRCHRTEMRKEIQEFLL 515
>gi|80477530|gb|AAI08466.1| LOC431806 protein [Xenopus laevis]
Length = 520
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 263/520 (50%), Gaps = 97/520 (18%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K+C +C ++ +++R D +CK+C +Y HKFRA LGK++++ P +KVL+A+SG SS
Sbjct: 31 KICMKCKESSAALLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAYSGGPSS 90
Query: 122 MALLHLLQEGMQLSSHKRILF----------SVCAIYIDD-------------------- 151
A++ +QEG+ + K++ F + C + ++
Sbjct: 91 SAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQILSEICSVLQQTKIPFH 150
Query: 152 -----------GSISQVSISERKANNAQ-----IATAMKYFDSYFTCLEQALE------P 189
GS+ Q E++ N + + + D+ + + + LE P
Sbjct: 151 IVSLEQVFSLPGSVLQRGAPEQRPNYKEEVDRFLVQEREQGDAGCSEMLERLEVTDSDSP 210
Query: 190 DNM-KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
+ K+Y P + + ++ ++F + TL+++Q LL TLR +L+L A+ +K
Sbjct: 211 GSSDKMYQSTCSRPPDMHTQ--KLKQLFASAKTLTAKQQLLHTLRSHLILHIARTCGYSK 268
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T E+ T L+ ++++N+SLG+GA +PLD GF D R GD+ +RP+R++SSKE+ YYN F
Sbjct: 269 VMTGESCTRLSIRLLSNVSLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSSKEIAYYNRF 328
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN-- 366
++ P+ +P+L T A +S+Q E FV LQ +FPSTVST++RT++KL++ + +
Sbjct: 329 FNVLPIFIPALDTKASENSSIQHLTEVFVNRLQADFPSTVSTLYRTSEKLNVSIIDADQE 388
Query: 367 --VNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTT 424
+ CLLC +PLDT+A AS+ FS AT QLSH +
Sbjct: 389 TCAKDRCLLCLSPLDTQAGKASA------FS-----AT--QLSHHL-------------- 421
Query: 425 DVNQTVGSQDIPEKS---VNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYA 481
SQ IP KS N S+ Q G + ++ + P + LCY+
Sbjct: 422 -------SQKIPMKSNDLANNSDKSCCQGGQGCKEAGYGDTCQSRALQTP-SFVHMLCYS 473
Query: 482 CQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
C+ VKDM S + + +L + EM +I++FLL
Sbjct: 474 CRLTVKDMQSLDVLPQYVLHEAEYRCHRTEMRKEIQEFLL 513
>gi|158564272|sp|Q32NV1.2|CTU2B_XENLA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2 B
Length = 512
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 263/520 (50%), Gaps = 97/520 (18%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K+C +C ++ +++R D +CK+C +Y HKFRA LGK++++ P +KVL+A+SG SS
Sbjct: 23 KICMKCKESSAALLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAYSGGPSS 82
Query: 122 MALLHLLQEGMQLSSHKRILF----------SVCAIYIDD-------------------- 151
A++ +QEG+ + K++ F + C + ++
Sbjct: 83 SAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQILSEICSVLQQTKIPFH 142
Query: 152 -----------GSISQVSISERKANNAQ-----IATAMKYFDSYFTCLEQALE------P 189
GS+ Q E++ N + + + D+ + + + LE P
Sbjct: 143 IVSLEQVFSLPGSVLQRGAPEQRPNYKEEVDRFLVQEREQGDAGCSEMLERLEVTDSDSP 202
Query: 190 DNM-KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
+ K+Y P + + ++ ++F + TL+++Q LL TLR +L+L A+ +K
Sbjct: 203 GSSDKMYQSTCSRPPDMHTQ--KLKQLFASAKTLTAKQQLLHTLRSHLILHIARTCGYSK 260
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T E+ T L+ ++++N+SLG+GA +PLD GF D R GD+ +RP+R++SSKE+ YYN F
Sbjct: 261 VMTGESCTRLSIRLLSNVSLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSSKEIAYYNRF 320
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN-- 366
++ P+ +P+L T A +S+Q E FV LQ +FPSTVST++RT++KL++ + +
Sbjct: 321 FNVLPIFIPALDTKASENSSIQHLTEVFVNRLQADFPSTVSTLYRTSEKLNVSIIDADQE 380
Query: 367 --VNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTT 424
+ CLLC +PLDT+A AS+ FS AT QLSH +
Sbjct: 381 TCAKDRCLLCLSPLDTQAGKASA------FS-----AT--QLSHHL-------------- 413
Query: 425 DVNQTVGSQDIPEKS---VNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYA 481
SQ IP KS N S+ Q G + ++ + P + LCY+
Sbjct: 414 -------SQKIPMKSNDLANNSDKSCCQGGQGCKEAGYGDTCQSRALQTP-SFVHMLCYS 465
Query: 482 CQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
C+ VKDM S + + +L + EM +I++FLL
Sbjct: 466 CRLTVKDMQSLDVLPQYVLHEAEYRCHRTEMRKEIQEFLL 505
>gi|58477695|gb|AAH89700.1| hypothetical LOC548371 [Xenopus (Silurana) tropicalis]
Length = 525
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/523 (30%), Positives = 246/523 (47%), Gaps = 100/523 (19%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K C +C ++ +++R D +CK+C +Y HKFRA LGK++++ P +KVL+AFSG SS
Sbjct: 32 KTCMKCKESSAVLLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAFSGGPSS 91
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSY 179
A++ +QEGM + K++ F ++ID+G+ +S ER+ N +++ ++ F Y
Sbjct: 92 SAMVQQVQEGMSRDAPKKLRFVPGILFIDEGTTCGMSHEERQQNMSEVQNVLQQTGFPFY 151
Query: 180 FTCLEQALEPDNMKLYTDVAELP-------------------------LEQFAK------ 208
LEQ L V E LE AK
Sbjct: 152 IVSLEQVFSLPGSILQRGVPEQRANYKQEVDRFMVQQQAQGETGCSDILENLAKLGVNVS 211
Query: 209 --DSEINKMFQT-------------------VTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
E +KMFQ+ TL+++ LL TLR +L+L A+ +
Sbjct: 212 ESSRECDKMFQSTCRHPPDTHTQKLIQLFTSAKTLTAKHQLLHTLRSHLILHIARTCGYS 271
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
K+ + E+ T L+ +++NISLG+GA +PLD GF D R GD+ +RP+R++S KE+ +YN
Sbjct: 272 KVMSGESCTRLSVSLLSNISLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSLKEIAFYNR 331
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN- 366
+S V + +L T +S+Q+ +E F+ LQ +FPSTVSTV+RT++KL++ N
Sbjct: 332 LFHVSSVFIQALNTKVLENSSIQQLSEVFINRLQADFPSTVSTVYRTSEKLNVSKIDANQ 391
Query: 367 ---VNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVT 423
CLLC +PLDT+ A S+ AT+ S Y+S K+
Sbjct: 392 GTCAKERCLLCLSPLDTQVGEA-SAFHATQISHYISQ--------------------KIL 430
Query: 424 TDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRS-----L 478
N P S S + G Y D P LQ L
Sbjct: 431 MKFND-------PANSSGKSCCQEGKCCKGPGYG---------DFCQPRALQAPSFVDML 474
Query: 479 CYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
CY C+ VKD+ S + + +L + EM +I +FLL
Sbjct: 475 CYGCRLTVKDLQSLDALPQYVLHEAEHRSRRIEMRKEIEEFLL 517
>gi|348535101|ref|XP_003455040.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like
[Oreochromis niloticus]
Length = 508
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/499 (29%), Positives = 248/499 (49%), Gaps = 58/499 (11%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K C +C +V+R D YC+ C + HKF+A LGK++++ P +KVL+A SG SS
Sbjct: 22 KKCVKCKEAPAALVIRAGDAYCRLCFKDFFVHKFKAVLGKNRIIFPGEKVLLAVSGGPSS 81
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSY 179
++L +QEG+ ++K++ F YID+G+ S+ ER+ A++ + F Y
Sbjct: 82 CSMLRQVQEGLSQKANKKLRFVPGIAYIDEGAAIGQSVEERQRTVAELQAVFQATGFPFY 141
Query: 180 FTCLEQALE--------------------------------PDNMKLYTDVAELPLEQFA 207
LEQ L+ +N + ++ L
Sbjct: 142 ILPLEQVLDLPASVVATNPSPSEQPASAYKAAVGHFVETDGSNNFPTPQEPKKMLLPHVQ 201
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
+ + ++ +V TL++R+ LL TLRQ+LL+ A+ +K+ ++ T LA K++ +IS
Sbjct: 202 ESHTLQQLLGSVKTLTAREELLNTLRQHLLVHTARTEGYSKLMLGDSCTRLAVKLLTSIS 261
Query: 268 LGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLA 327
LG+GA + D GFSD R GDII +RP+RD+S+KE+ YYN + V +PS+ T A
Sbjct: 262 LGRGAQLAQDTGFSDSRYGDIILVRPMRDYSAKEIAYYNHLFTVPSVVIPSVDTKTVDKA 321
Query: 328 SLQKAAESFVTDLQTNFPSTVSTVFRTADKLS---LDLTSMNVNNTCLLCKAPLDTRADL 384
S+Q+ ESFVT LQ +FPSTVST++RT++KL + + + CLLC LDT +
Sbjct: 322 SIQRLTESFVTKLQADFPSTVSTIYRTSEKLQSACMKWSGAERCDRCLLCLCSLDTAVE- 380
Query: 385 ASSSMGATRFSRYVSNAT--REQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNG 442
S+ AT S +S + R + + + + T + G +D +G
Sbjct: 381 EPSAFQATLLSDQLSGSKCLRGSAAETLRPNPGRPESPAPTGQCCSSAGGRDCGRPGSDG 440
Query: 443 SEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGILKK 502
+ K+ T L+ LCY+C ++DM++ + + IL +
Sbjct: 441 G------------CCSSAKLPET------TRLKSLLCYSCALTIRDMSTVNHLPQYILSE 482
Query: 503 CLQEKSLNEMEDQIRDFLL 521
+ + ++M ++I +FLL
Sbjct: 483 AQRRQRRSQMREEISEFLL 501
>gi|260829697|ref|XP_002609798.1| hypothetical protein BRAFLDRAFT_264956 [Branchiostoma floridae]
gi|229295160|gb|EEN65808.1| hypothetical protein BRAFLDRAFT_264956 [Branchiostoma floridae]
Length = 423
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 191/342 (55%), Gaps = 24/342 (7%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K C RC + +V++ +C+ C L Y HKFR+ LGK+++++P +KVL+AFSG SS
Sbjct: 23 KNCVRCG-KDAVLVVQTSAAFCRECFLNYFTHKFRSGLGKTRVVQPGEKVLLAFSGGPSS 81
Query: 122 MALLHLLQEGMQLSSHK-RILFSVCAIYIDDGSISQ---VSISERKANNAQIATAMKYFD 177
ALLHL++ GM+ + K R+ ++ID+GSI Q V +R F
Sbjct: 82 AALLHLVKRGMEEGTQKKRLRIEPGVVFIDEGSIIQGFDVDQRQRSVQTISKIAGESGFP 141
Query: 178 SYFTCLE-----QALEPD--------NMKLYTDVAELPLEQFAKDS----EINKMFQTVT 220
+ LE QA E D + T+ E ++ + D + ++F+
Sbjct: 142 VHHVMLEDITTEQATEADLPVSNCAGTSQATTEDVERQVKSLSTDDTSADRLKRLFEGAK 201
Query: 221 TLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF 280
+L++++ LLQ LR LL++ A+ TK+ ++ T L+ +I+A+I+ G+GA +PL+ GF
Sbjct: 202 SLTAKEDLLQILRSKLLVRVARTHGYTKVMVGDSGTRLSVRIMADIAQGRGAALPLNTGF 261
Query: 281 SDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDL 340
+DDR GD++ +RP+RDF +KE+ YN + +P+L T AS+ E+F++ L
Sbjct: 262 ADDRHGDVVIVRPMRDFIAKEISMYNTICQVESAFLPTLTTRVAEKASIGHLTEAFISGL 321
Query: 341 QTNFPSTVSTVFRTADKLSLDLTSMNVNN--TCLLCKAPLDT 380
Q NFPSTVSTVFRT KL + T C +CKAPLDT
Sbjct: 322 QVNFPSTVSTVFRTGAKLCVSDTENRPEGYKRCAMCKAPLDT 363
>gi|307208407|gb|EFN85786.1| UPF0432 protein C16orf84-like protein [Harpegnathos saltator]
Length = 423
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 232/441 (52%), Gaps = 24/441 (5%)
Query: 86 CLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVC 145
C L NHKFRAALGKSK++R D VLV SG +S LLH+++ GM S+HK+ +F
Sbjct: 2 CFLTVTNHKFRAALGKSKIIRHGDSVLVDHSGELNSTILLHMIKAGMSESTHKKFMFKTT 61
Query: 146 AIYIDDGSISQVSISERKANNAQIATAMKYF--DSYFTCLEQALEPDNMKLYTDVAELPL 203
+YIDD + ++ + +R + ++A +K F D Y L Q L +++ D+ ++
Sbjct: 62 VLYIDDATSNKTTNEDRNSLRRKVAEQVKNFGFDCYVVSLSQVLNTEDL---LDIRQIDG 118
Query: 204 EQFAKDSE-INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
E D+E + K+ ++ +SR LL L + LLL A+KLNC K+F A++ D+ATK+
Sbjct: 119 ELINSDNEQLCKILSNLSNNTSRIDLLDKLHRKLLLSVARKLNCNKVFVADSTMDVATKV 178
Query: 263 IANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATL 322
+ +I LG+GA + F D R DI L+PLRDF+ +E++YY+ + L+PV +
Sbjct: 179 LGDICLGRGAQLSTLAAFCDARCTDIKILKPLRDFTQQELVYYSEYYMLNPVKSKKMDIT 238
Query: 323 ADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL--DLTSMNVNNTCLLCKAPLDT 380
P S+Q +F L++ F T+ST+ RTA+KLS + + ++ + C+LC A L++
Sbjct: 239 IQPAISIQALTYNFTMALESQFSGTISTIMRTAEKLSARNNQNNQDMEDNCVLCDAGLNS 298
Query: 381 RADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSV 440
+ ++M A SR VS+ ++ + I + E K + N + + +
Sbjct: 299 VSSDNVTAMKAIEVSRLVSSDAKD-IRIFIRTEEKESFNDKKSVRTNLCLPTN---AECC 354
Query: 441 NGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGIL 500
N S + + N + E V QR LCY+C+ + ++ + +L
Sbjct: 355 NNSGSRCDYVGNKIGQLTVEDV------------QRCLCYSCKLIFRNSDFLSSLPASLL 402
Query: 501 KKCLQEKSLNEMEDQIRDFLL 521
+ +L +M + I DFLL
Sbjct: 403 SSMQKRLALKKMRNDISDFLL 423
>gi|321475210|gb|EFX86173.1| hypothetical protein DAPPUDRAFT_308415 [Daphnia pulex]
Length = 470
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 226/443 (51%), Gaps = 35/443 (7%)
Query: 57 FSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFS 116
S D +C RCN +V+LR D YC+ C ++Y HKFR+ +GK+ ++ + VL+A+S
Sbjct: 21 LSVTDAICRRCNILKAQVLLRKTDPYCRDCFMKYAVHKFRSTIGKAHALKHNEHVLLAYS 80
Query: 117 GSHSSMALLHLLQEGMQLSSHKRI--LFSVCAIYIDDGSISQVSISERKANNAQIATAMK 174
G SS +++ L++EG+ S K+I +F ++ID+G I +S ERK + K
Sbjct: 81 GGLSSGSMVKLIKEGLDFSESKKIKMVFKPTLVHIDEGLILNLSKHERKETTDFVLEQAK 140
Query: 175 Y--FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTL 232
FD Y LE L PD L ++ +E +S++ +F +V +L++++ LL L
Sbjct: 141 KNGFDVYICSLEYCLAPDLNDLKLEMNSYQIEPSIYESQLEMLFGSVKSLTAKEDLLIRL 200
Query: 233 RQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLR 292
+Q L+ A +LN K+F T LA ++++ I G+GA + ++GF+D RTG + LR
Sbjct: 201 KQRLITLLATRLNHAKVFLGPNATRLAGQLLSAIGQGRGAQIAHEIGFTDSRTGTVF-LR 259
Query: 293 PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVF 352
P+R+F KEV Y F + V +P+L++ AS+ + E FV LQTNFP+T+ST+F
Sbjct: 260 PMREFVDKEVAYLANFLGVDSVCLPTLSSKLGSTASIGRLTEDFVVTLQTNFPATISTLF 319
Query: 353 RTADKLSLDLTSMNVNNT-----CLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLS 407
R +DKL ++ +N ++ CLLC + A S S +T +S
Sbjct: 320 RISDKLKSNIADLNPSDCERDSLCLLC--------------LSAIEESSVCSASTARHIS 365
Query: 408 HVIISSESPDHAS-KVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTE 466
S H S + T Q+VG +V + Q P +T
Sbjct: 366 QTFSRSGPSGHPSDDLRTHPLQSVG-------TVRHQDSTSCSSNCNSQGKP---CCKTS 415
Query: 467 DNEGPDNLQRSLCYACQYVVKDM 489
+++ + LCY C+ ++D+
Sbjct: 416 NDQIKSDWSAVLCYGCRITMEDV 438
>gi|363738244|ref|XP_414210.3| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Gallus
gallus]
Length = 479
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 197/394 (50%), Gaps = 50/394 (12%)
Query: 35 CSKEQVLNGDEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK 94
C G E R + SR + C +C VV+R+ D +C+AC +Y HK
Sbjct: 2 CEASGRCGGCGEAPVRRRAAPACSR-PRPCVKCGDGPAAVVIRIGDAFCRACFREYFVHK 60
Query: 95 FRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 154
FRA LGK++++ P +KVL+A SG +S A+L +QEG+ + KR+ F IYID+G++
Sbjct: 61 FRAMLGKNRVIFPGEKVLLALSGGMASSAMLRQVQEGLSRETAKRLRFVPGLIYIDEGAV 120
Query: 155 SQVSISERKANNAQIATAMK--YFDSYFTCLEQALEPDNMKL-------------YTDVA 199
S+ +R+ ++ ++ F Y LEQALE L Y
Sbjct: 121 CGQSLVQREQTLTRMEALLQETGFPYYLASLEQALELPGSILRRGPGGDSEPSPSYKAAV 180
Query: 200 ELPLEQ---------------------------------FAKDSEINKMFQTVTTLSSRQ 226
E ++Q A+ E+ ++F TL++++
Sbjct: 181 EGFIQQQRQEEANGDGGTSPAGLGTQDGPAGGSHAHLPAAARTEELLRLFDAAETLTAKE 240
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
LLQ LR +LLL A+ TK+ T E+ T +A K++ N++LG+GA + +D GF D R G
Sbjct: 241 ELLQMLRSHLLLHTARTQGYTKVMTGESCTRVAIKLLTNLALGRGAFLAVDTGFVDSRHG 300
Query: 287 DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPS 346
D+ +RP+RD+ +KE+ +YN F + V P L S+ + E+F+ LQ +FPS
Sbjct: 301 DVTVVRPMRDYMAKEIAFYNHFFGVPTVITPPLHAKRREKTSIHRLMENFLLGLQVDFPS 360
Query: 347 TVSTVFRTADKLSLDLTSMNVN-NTCLLCKAPLD 379
T+STV+RT +KLS+ N CLLC LD
Sbjct: 361 TISTVYRTGEKLSVAPAESNGELQRCLLCLCALD 394
>gi|326927536|ref|XP_003209948.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Meleagris
gallopavo]
Length = 487
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 196/384 (51%), Gaps = 49/384 (12%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R+ D +C++C +Y HKFRA LGK++++ P +KVL+A SG +S A
Sbjct: 13 CVKCGDGPAAVVIRIGDAFCRSCFREYFVHKFRAMLGKNRVIFPGEKVLLALSGGMASSA 72
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK--YFDSYFT 181
+L +QEG+ + KR+ F IYID+G++ S+ +R+ ++ ++ F Y
Sbjct: 73 MLRQVQEGLSRETAKRLRFVPGLIYIDEGAVCGQSLLQREQTLTRMEALLQETGFPYYLA 132
Query: 182 CLEQALE---------PDNMKLYTDVAELPLEQF-------------------------- 206
LEQALE P + ++ +E F
Sbjct: 133 SLEQALELPGSILRRGPGGDSEPSPSYKVAVEGFIQQQRQEEASGDGGTSPTGLSTQNGP 192
Query: 207 -----------AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQ 255
A+ E+ ++F TL++++ LLQ LR +LLL A+ TK+ T E+
Sbjct: 193 TGDSHACLPAAARTEELLRLFDAAETLTAKEELLQMLRNHLLLHTARTQGYTKVMTGESC 252
Query: 256 TDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
T +A K++ N++LG+GA + +D GF D R GD+ +RP+RD+++KE+ +YN F + +
Sbjct: 253 TRVAIKLLTNLALGRGAFLAVDTGFVDSRHGDVTVVRPMRDYTAKEIAFYNHFFGVPTII 312
Query: 316 VPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN-NTCLLC 374
P L S+ + E+F+ LQ +FPST+STV+RT +KLS+ N CLLC
Sbjct: 313 TPPLHAKRREKTSIHRLMENFLLGLQVDFPSTISTVYRTGEKLSVAPAEANSELQRCLLC 372
Query: 375 KAPLDTRADLASSSMGATRFSRYV 398
LD ++ T + Y
Sbjct: 373 LCALDIAGGGVATGGEYTEVTAYA 396
>gi|340377678|ref|XP_003387356.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 A-like
[Amphimedon queenslandica]
Length = 412
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 192/341 (56%), Gaps = 23/341 (6%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
D++C +CN+ + R KD +C+AC QY H+FR+ GKS+++R ++VL+AFSG S
Sbjct: 22 DQVCMKCNSEKAVTIARTKDPFCRACFDQYFTHRFRSTFGKSRLIRQGEEVLLAFSGGQS 81
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIA--TAMKYFDS 178
S LLHL+QEG+ + KR+ F+ IYID+G + + +K+ +++ A F
Sbjct: 82 SRVLLHLVQEGLSEHAVKRLRFTPIIIYIDEGVVYGYASERQKSLLKEVSGIIAQTQFPG 141
Query: 179 YFTCLEQALEPDNMKLYTD-VAELPLEQFAK-----------------DSEINKMFQTVT 220
YFT LE+ + +D V EQ +K + ++ ++F ++
Sbjct: 142 YFTKLEEVFTGARVWPISDAVLSAGSEQRSKLAAPDPTSSISQGEMPGEVKLKQLFDSLK 201
Query: 221 TLSSRQYLLQTLRQNLLLQ-AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVG 279
+ ++++ +LQ+LR+ LL+ AAK N KI + T L+ +++ NI+ G+G +PLD G
Sbjct: 202 SSTAKEDMLQSLRRQLLVDIAAKYFNTGKILVGDNATRLSVRLLGNIAQGRGGTIPLDTG 261
Query: 280 FSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLA-SLQKAAESFVT 338
F D+R+ D++ LRPLR+F E+ Y + L V S +L S++ SFV
Sbjct: 262 FCDNRS-DVMVLRPLREFPDSEIASYLTLHQLQSVDASSDHSLPGSSGHSIEGLTASFVH 320
Query: 339 DLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLD 379
LQ+NF STVST+FRT+DKL L ++ C LC+AP +
Sbjct: 321 SLQSNFSSTVSTIFRTSDKLQLSEDLVHSGQCCPLCQAPCE 361
>gi|383854273|ref|XP_003702646.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 A-like
[Megachile rotundata]
Length = 480
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 202/359 (56%), Gaps = 29/359 (8%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
LC C +N +V LR K+ YCK C L L HKF+A LGKSK +RP D VLVA SG +S
Sbjct: 37 LCKVCGSNEIQVSLRNKNNYCKVCFLGILTHKFKATLGKSKAIRPTDTVLVAHSGKANST 96
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKA------NNAQIATAMKYF 176
L+HL+ + S+ K+I F +YIDDG S+ ER+ N A+ + Y
Sbjct: 97 VLVHLIAANINESTFKKIPFHCKVLYIDDGMAKGRSVEERQCIRNALVNEAKSTQLLTYI 156
Query: 177 DSYFTCLEQALEPDNMKLYTDVAE-LPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQN 235
C+ DN++ +A+ L + +D+ + +MF + + +SR LL+ LR+
Sbjct: 157 LPLSRCIN-----DNVREEIQLADTLEIGTTREDTVVQEMFDRLESDTSRDELLRQLRRK 211
Query: 236 LLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLR 295
LL+ AA++LNC KIF A+T DLA K++ N+S G+G+ +P DV FSD R D RPL+
Sbjct: 212 LLVSAARRLNCNKIFVADTSVDLAIKVLGNVSTGRGSQLPFDVTFSDARCTDTTLFRPLK 271
Query: 296 DFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTA 355
D + ++++ Y + L P+ + +AS++ AA +FV L + F STV T++RT+
Sbjct: 272 DLTGEDIVGYLNCHKLCPI-ITCQKYNHSFVASIRAAARNFVCQLDSEFYSTVPTIYRTS 330
Query: 356 DKLS-----LDLTSMNV-------NNTCLLCKAPLDTRADLASSSMGATR---FSRYVS 399
+KL+ D + NV N+TC+LC+ PLD+R S+ TR FS+ VS
Sbjct: 331 EKLASKLEKFDDSKNNVNIEVDVENDTCILCEMPLDSRCS-GEGSLSVTRAKLFSKQVS 388
>gi|126304966|ref|XP_001376877.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like
[Monodelphis domestica]
Length = 520
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 249/524 (47%), Gaps = 94/524 (17%)
Query: 55 FSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVA 114
+ ++ C +C +++R D +CK C Y HKFRA LGK++++ P +KVL+A
Sbjct: 20 LPWPGCEQKCMKCKEGLPVLIIRAGDAFCKDCFKAYYIHKFRAMLGKNRLIFPGEKVLLA 79
Query: 115 FSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK 174
+SG SS +++ +QEG+ S KR+ F IYID+G++ S +R A++ ++
Sbjct: 80 WSGGPSSSSMIWQVQEGLSRESAKRLRFVPGIIYIDEGAVCGQSPEDRTKTMAEMEQVLQ 139
Query: 175 Y--FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSE--------------------- 211
F + LE+ L T V + P+ Q + SE
Sbjct: 140 TVGFPYHLVSLEEVF-----NLPTSVLQ-PISQGPRGSENTYKEAVDGFIQQQQQQQQQQ 193
Query: 212 ----------------------------INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKK 243
+ +F +V TL++++ LLQ LR +L+L A+
Sbjct: 194 QQQQRLQEEGDKETPVSNSLPRAAHTVALMNLFSSVKTLTAKEELLQILRAHLILHVART 253
Query: 244 LNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVI 303
+K+ ++ T LA K++ N++LG+GA + D GFSDDR GD+ LRP+RD++ KE+
Sbjct: 254 QGYSKVMLGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDDRHGDVTMLRPMRDYTLKEIA 313
Query: 304 YYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL----- 358
+YN + V P++ T A AS+ + ESF+ LQ +PST+STV+RT++KL
Sbjct: 314 FYNRMFGVPSVFTPAIDTKAPDKASIHRLMESFILKLQAQYPSTISTVYRTSEKLVKAPR 373
Query: 359 SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSH-VIISSESPD 417
+ + T+ V + CLLC LD + ++++ GA T E LS +++ E P
Sbjct: 374 NGEATAGPVPSRCLLCVCALDIDSADSATAFGAQ---------TAEHLSQKPLLAPELPA 424
Query: 418 HASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRS 477
A ++T G Q Q++ P+E+ E +
Sbjct: 425 GAPGRPCCCSRTEGQQGC------------CQVIR----LPSER------KEPRASFIEQ 462
Query: 478 LCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
LCY+C+ +KD+ + + +L + + ++ +I++FL
Sbjct: 463 LCYSCRVNMKDLPFLEPLPPYLLMESQCRRQRAWVKQEIQEFLF 506
>gi|395508485|ref|XP_003758541.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Sarcophilus
harrisii]
Length = 589
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 241/519 (46%), Gaps = 92/519 (17%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
++ C +C +++R D +CK C Y HKFRA LGK++++ P +KVL+A+SG S
Sbjct: 94 EQKCMKCKEGLPVLIIRAGDAFCKDCFKAYYIHKFRAMLGKNRLIFPGEKVLLAWSGGPS 153
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDS 178
S +++ +QEG+ S KR+ F IY+D+G++ S+ ER A++ ++ F
Sbjct: 154 SSSMIWQVQEGLSRESAKRLRFVPGVIYVDEGAVCGQSLEERAKTVAEMKLILQTVGFPY 213
Query: 179 YFTCLEQA-------LEP-------------------------------------DNMKL 194
+ LE+ L+P D ++
Sbjct: 214 HIVSLEEVFNLPASVLQPVSQGPQGPENTYKEAVDGFIQQQQRLPEEGGQEAALSDELRR 273
Query: 195 YTDVAELPLEQFAKDS--------EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNC 246
+ + E+ A DS + +F +V TL++++ LLQTLR +L+L A+
Sbjct: 274 LSTRDPVGPEEAAGDSLPRPAQSTALTTLFSSVKTLTAKEELLQTLRAHLILHTARLHGY 333
Query: 247 TKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYN 306
+K+ ++ T LA K++ N++LG+GA + D GFSDDR GD++ LRP+RD++ KE+ +YN
Sbjct: 334 SKVMLGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDDRHGDVVLLRPMRDYTLKEIAFYN 393
Query: 307 IFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DL 362
+ V P++ T A AS+ + ESF+ LQ FPST+STV+RT++KL
Sbjct: 394 RMFGVPSVFTPAIDTKAPEKASIHRLMESFILRLQAQFPSTISTVYRTSEKLVKAPRNGG 453
Query: 363 TSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKV 422
+ V CLLC LD + ++++ GA + L H+ P A
Sbjct: 454 AAGPVPTRCLLCMCTLDIDSADSATAFGA------------QTLEHLSQKPTPPPGAPGR 501
Query: 423 TTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYAC 482
T ++P G Q + R + LCY+C
Sbjct: 502 PCCTRGT---------------ELPRACCRGPQPASQREEPRA-------SFIEQLCYSC 539
Query: 483 QYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ +KD+ + + IL + + ++ +I++FL
Sbjct: 540 RVNMKDVPFLEPLPPYILTEAQCRRQRAWVKQEIQEFLF 578
>gi|296478014|tpg|DAA20129.1| TPA: cytoplasmic tRNA 2-thiolation protein 2 [Bos taurus]
Length = 501
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 146/506 (28%), Positives = 241/506 (47%), Gaps = 84/506 (16%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
D+ C +C VV+R D +C+ C HKFRA LGKS+++ P +KVL+A+SG
Sbjct: 24 GDQKCVKCKEGLPVVVIRAGDAFCRDCFKALYVHKFRAMLGKSRLIFPGEKVLLAWSGGP 83
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FD 177
SS +++ + EG+ S KR+ F +YID+G+ S +R A++ A++ F
Sbjct: 84 SSSSMVWQVLEGLSRDSAKRLRFVPGVVYIDEGAACGQSPEDRARTLAEVKLALQTTGFP 143
Query: 178 SYFTCLEQ--ALEPDNMK--------------------------LYTDVAELPLEQFAKD 209
+ LE+ +L P ++ L T+ E + A+D
Sbjct: 144 WHAVALEEVFSLPPSALRCSAQEAAGTEGAYKAAVDSFLQQQHALGTNGVERQSQHCAQD 203
Query: 210 SE-------------INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQT 256
+ ++++F +V TL++++ LLQTLR +L+L A+ +K+ T ++ T
Sbjct: 204 PQSPTGPPTTAQTQALSRLFDSVKTLTAKEELLQTLRTHLILHVARNHGYSKVMTGDSCT 263
Query: 257 DLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV 316
LA K++ +++LG+GA + D GFSD+R GD++ +RP+R+ + KEV +YN + +
Sbjct: 264 RLAIKLMTSLALGRGAFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFAVPSICT 323
Query: 317 PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNNTCLLCK 375
P+L T A AS+ + E+F+ LQ FPSTVSTV+RT++KL CLLC
Sbjct: 324 PALDTKAPEKASIHRLMEAFILRLQAQFPSTVSTVYRTSEKLVKAPRAGCAAGPRCLLCM 383
Query: 376 APLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDI 435
LD ++++ GA Q SH+ ++ T V Q
Sbjct: 384 CTLDVDTADSATAFGA-------------QTSHL----------PQMQTPVTQA------ 414
Query: 436 PEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKDI 495
++ G GM P + ED + LCY C+ +KD+ S + +
Sbjct: 415 --RAAAGP-----CCCAGMGGAPG--CCKREDPRA--QVMEQLCYGCRVNMKDLPSLELL 463
Query: 496 GEGILKKCLQEKSLNEMEDQIRDFLL 521
IL + E +IR++LL
Sbjct: 464 PPYILSEAQLRSQRATAEQEIREYLL 489
>gi|322801373|gb|EFZ22034.1| hypothetical protein SINV_01175 [Solenopsis invicta]
Length = 445
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 246/476 (51%), Gaps = 42/476 (8%)
Query: 54 VFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLV 113
+F +R LC + N +L ++ YC C L NHKFRAALGKSK++R D +LV
Sbjct: 4 IFVSNRDTALCRKDKCQNASALLVGRNSYCMTCFLNDTNHKFRAALGKSKIIRHGDLILV 63
Query: 114 AFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAM 173
+G +S LLHL++ GM S+HK+++F +YID ++ + + ER+ +IA
Sbjct: 64 DHTGELNSTVLLHLIKAGMSESTHKKLIFKTVVLYIDGCTVEEKTSEERETLRQKIAEET 123
Query: 174 KY--FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLS---SRQYL 228
K FD Y + + L D+ D+ P+EQ + N++ +T+LS S+
Sbjct: 124 KASGFDGYAISMSEVLNEDDT---LDIK--PMEQEINNKNYNRLRAILTSLSNETSKTDF 178
Query: 229 LQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDI 288
L LR+ LLL AA+KLNC KIF A+T D+AT+++ ++ LG+GA + F D R DI
Sbjct: 179 LNQLRRRLLLLAARKLNCNKIFVADTALDIATRVLGDVCLGRGAKLSTQANFCDARCADI 238
Query: 289 ITLRPLRDFSSKEVIYYNIFNDLSPVH--VPSLATLADPLASLQKAAESFVTDLQTNFPS 346
L+P+R+F+ +E+IYY+ ++ ++ + VPS +T S+Q A +F ++ F +
Sbjct: 239 KILKPMREFTQQELIYYSDYHKINFIESVVPSKST------SIQTLARNFTMKQESQFSN 292
Query: 347 TVSTVFRTADKLS-LDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQ 405
TVST+FRTADK+S N + C LC DTR D S T A R
Sbjct: 293 TVSTIFRTADKISPRGDVQQNAEDNCALC----DTRLDFVPSGSEVT--------AMRAI 340
Query: 406 LSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRT 465
++SS+S + AS + + N G + + SE + + +V+R
Sbjct: 341 EVSKLVSSKSVN-ASSLNNEQN---GELNYLALCSDNSEHCNDNAECSCKNNRKGQVTR- 395
Query: 466 EDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+++ R LCY+C+ + ++ + +L Q +L M ++I DFLL
Sbjct: 396 ------EDILRHLCYSCRLIFQNSDILGTLPSSLLSAVQQRIALENMRNKISDFLL 445
>gi|78369368|ref|NP_001030521.1| cytoplasmic tRNA 2-thiolation protein 2 [Bos taurus]
gi|122140220|sp|Q3SZG9.1|CTU2_BOVIN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|74354149|gb|AAI02863.1| Hypothetical protein LOC614194 [Bos taurus]
Length = 501
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 240/506 (47%), Gaps = 84/506 (16%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
D+ C +C VV+R D +C+ C HKFRA LGKS+++ P +KVL+A+SG
Sbjct: 24 GDQKCVKCKEGLPVVVIRAGDAFCRDCFKALYVHKFRAMLGKSRLIFPGEKVLLAWSGGP 83
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FD 177
SS +++ + EG+ S KR+ F +YID+G+ S +R A++ A++ F
Sbjct: 84 SSSSMVWQVLEGLSRDSAKRLRFVPGVVYIDEGAACGQSPEDRARTLAEVKLALQTTGFP 143
Query: 178 SYFTCLEQ--ALEPDNMK--------------------------LYTDVAELPLEQFAKD 209
+ LE+ +L P ++ L T+ E + A+D
Sbjct: 144 WHAVALEEVFSLPPSALRCSAQEAAGTEGAYKAAVDSFLQQQHALGTNGVERQSQHCAQD 203
Query: 210 SE-------------INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQT 256
+ ++++ +V TL++++ LLQTLR +L+L A+ +K+ T ++ T
Sbjct: 204 PQSPTGPPTTAQTQALSRLIDSVKTLTAKEELLQTLRTHLILHVARNHGYSKVMTGDSCT 263
Query: 257 DLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV 316
LA K++ +++LG+GA + D GFSD+R GD++ +RP+R+ + KEV +YN + +
Sbjct: 264 RLAIKLMTSLALGRGAFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFAVPSICT 323
Query: 317 PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNNTCLLCK 375
P+L T A AS+ + E+F+ LQ FPSTVSTV+RT++KL CLLC
Sbjct: 324 PALDTKAPEKASIHRLMEAFILRLQAQFPSTVSTVYRTSEKLVKAPRAGCAAGPRCLLCM 383
Query: 376 APLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDI 435
LD ++++ GA Q SH+ ++ T V Q
Sbjct: 384 CTLDVDTADSATAFGA-------------QTSHL----------PQMQTPVTQA------ 414
Query: 436 PEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKDI 495
++ G GM P + ED + LCY C+ +KD+ S + +
Sbjct: 415 --RAAAGP-----CCCAGMGGAPG--CCKREDPRA--QVMEQLCYGCRVNMKDLPSLELL 463
Query: 496 GEGILKKCLQEKSLNEMEDQIRDFLL 521
IL + E +IR++LL
Sbjct: 464 PPYILSEAQLRSQRATAEQEIREYLL 489
>gi|156387908|ref|XP_001634444.1| predicted protein [Nematostella vectensis]
gi|156221527|gb|EDO42381.1| predicted protein [Nematostella vectensis]
Length = 424
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 141/466 (30%), Positives = 231/466 (49%), Gaps = 75/466 (16%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
++C +C+++ VV+RL D CK C L Y HKFR+ +GK++++R ++VL+A SG +S
Sbjct: 23 RMCMKCSSSLAVVVVRLNDPLCKDCFLAYCTHKFRSTIGKARVIRHNERVLLAVSGGPAS 82
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISE--RKANNAQIATAMKYFDSY 179
+A+LH + E +S +R+ F ++I++G+I VS + RK + + F +
Sbjct: 83 LAMLHFISEA---TSARRLRFHPDVVFINNGAIIGVSTQDIVRKIHEVTMKAG---FALH 136
Query: 180 FTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQ 239
LE D M P E + +F +VT+L++++ LL++L Q LL++
Sbjct: 137 VVGLETLFRADKMS--------PEESL---QALQTLFDSVTSLTAKEDLLRSLHQQLLVK 185
Query: 240 AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSS 299
A +++ ++ ++A I+++IS G+G +P F+D R I LRP+R+F +
Sbjct: 186 VAMDEGYSRVMVGDSANNIAVHILSDISQGRGGALPFITAFNDSRHDGISILRPMREFIA 245
Query: 300 KEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
KE+ YN F + + SLAT A AS+ K E F++ LQ FP TVSTVFRT DKLS
Sbjct: 246 KEICLYNHFMGIDAISTNSLATKAGINASINKLTEEFISGLQAQFPFTVSTVFRTGDKLS 305
Query: 360 LDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATR---EQLSHVIISSESP 416
L +++ C +CK P VS+A R ++L H+ I+
Sbjct: 306 LSEEKCDIH--CAICKVP--------------------VSSADRNLCKRLEHLAINHSHR 343
Query: 417 DHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQR 476
+S + ++ S D GS P++ S L+
Sbjct: 344 SDSSPPSNNIGSACSSDD-----TGGS--------------PHQSTS----------LKD 374
Query: 477 SLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNE-MEDQIRDFLL 521
LCY CQ +KD+ D G ++ C+Q S E + I++FLL
Sbjct: 375 MLCYGCQLTLKDVKQDI-TGLPFVQDCIQRISNREVINSSIQEFLL 419
>gi|61676106|ref|NP_001012777.1| cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Homo sapiens]
gi|121941955|sp|Q2VPK5.1|CTU2_HUMAN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|83318442|gb|AAI08660.1| Chromosome 16 open reading frame 84 [Homo sapiens]
gi|115940699|gb|AAI25270.1| Chromosome 16 open reading frame 84 [Homo sapiens]
gi|187957358|gb|AAI57882.1| Chromosome 16 open reading frame 84 [Homo sapiens]
Length = 515
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 199/386 (51%), Gaps = 53/386 (13%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 28 CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSS 87
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFT 181
++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++ F +
Sbjct: 88 MVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATGFPWHVV 147
Query: 182 CLEQALEPDNMKLYTDVAEL---------PLEQF-------------------------- 206
LE+ L+ EL ++ F
Sbjct: 148 ALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEEQPPQPP 207
Query: 207 ------------AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAET 254
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K+ T ++
Sbjct: 208 LDPQNLARPPAPAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSKVMTGDS 267
Query: 255 QTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPV 314
T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V
Sbjct: 268 CTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPSV 327
Query: 315 HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNT 370
P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL + +
Sbjct: 328 FTPAVDTKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAAGDSGPR 387
Query: 371 CLLCKAPLDTRADLASSSMGATRFSR 396
CLLC LD A ++++ GA SR
Sbjct: 388 CLLCMCALDVDAADSATAFGAQTSSR 413
>gi|61676108|ref|NP_001012780.1| cytoplasmic tRNA 2-thiolation protein 2 isoform 2 [Homo sapiens]
Length = 485
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 199/386 (51%), Gaps = 53/386 (13%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 28 CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSS 87
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFT 181
++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++ F +
Sbjct: 88 MVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATGFPWHVV 147
Query: 182 CLEQALEPDNMKLYTDVAEL---------PLEQF-------------------------- 206
LE+ L+ EL ++ F
Sbjct: 148 ALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEEQPPQPP 207
Query: 207 ------------AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAET 254
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K+ T ++
Sbjct: 208 LDPQNLARPPAPAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSKVMTGDS 267
Query: 255 QTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPV 314
T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V
Sbjct: 268 CTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPSV 327
Query: 315 HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNT 370
P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL + +
Sbjct: 328 FTPAVDTKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAAGDSGPR 387
Query: 371 CLLCKAPLDTRADLASSSMGATRFSR 396
CLLC LD A ++++ GA SR
Sbjct: 388 CLLCMCALDVDAADSATAFGAQTSSR 413
>gi|332026706|gb|EGI66815.1| Cytoplasmic tRNA 2-thiolation protein 2 A [Acromyrmex echinatior]
Length = 430
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 241/468 (51%), Gaps = 47/468 (10%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
LC +C N +++L + YCK C L +NHKFRAALGKSK++R DK+L+ G +S
Sbjct: 1 LCRKCRCENADILLLGQSGYCKTCFLNVINHKFRAALGKSKIIRHGDKILIDHLGELNST 60
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYF 180
LLHL++ GM S+HKR++F +Y+DD +ER +IA K F+SY
Sbjct: 61 VLLHLVKAGMSESAHKRLIFEAVILYVDDMQ----KTNERDILRHKIAEETKASGFNSYA 116
Query: 181 TCLEQALEPDNMKLYTDVAELPLEQ---FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLL 237
+ Q L ++ D+ P++Q + D+ ++ + ++ +SR L LR+ LL
Sbjct: 117 VSMSQVLNEEDA---VDIK--PIDQEINYENDNRLHAILANLSDDTSRTDFLNQLRRRLL 171
Query: 238 LQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDF 297
L AA+KLNC KIF A++ D+A ++ ++ LG+GA + F D R DI L+P+RDF
Sbjct: 172 LSAARKLNCNKIFVADSVADIAMNVLGDVCLGRGAQLSTQANFCDARCIDIKILKPMRDF 231
Query: 298 SSKEVIYYNIFNDLSPVHVPSLATLAD--PLASLQKAAESFVTDLQTNFPSTVSTVFRTA 355
+ +E++YY+ ++ ++PV ++ D P S+Q A +F +L++ F T+STV+RTA
Sbjct: 232 TQQEIVYYSEYHKINPV-----KSIEDSVPATSIQALARNFTMELESQFSGTISTVYRTA 286
Query: 356 DKLS-LDLTSMNVNNTCLLCKAPLD-TRADLASSSMGATRFSRYVSNATREQLSHVIISS 413
DK+S ++ N C LC A LD + ++M A S+ +S+ + ISS
Sbjct: 287 DKISPRSNVQQSLENNCALCDARLDFVPSGNEVTAMRAIEVSKLMSSKCID-----TISS 341
Query: 414 ESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDN 473
+ ++ N D + E+ TED
Sbjct: 342 NNEENGK-----TNYLFTHSDNNGCCNDNVN--------CNCENNRERQVTTED------ 382
Query: 474 LQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ R LCY+C+ + ++ ++ +L Q +L +M ++I DFLL
Sbjct: 383 VWRHLCYSCRQIFRNSDVLHNLPLPLLLAVQQRAALKKMREKINDFLL 430
>gi|402909286|ref|XP_003917353.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Papio
anubis]
Length = 515
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 153/520 (29%), Positives = 254/520 (48%), Gaps = 93/520 (17%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI-----ATA 172
SS +++ + EG+ S KR+ F I++D+G+ S+ ER A++ AT
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVPGVIFVDEGAAFGKSLEERSKTLAEVKPILQATG 141
Query: 173 MKYFDSYFTCLEQ--ALEPDNMKL-----------YTDVAELPLEQ-------------- 205
+ + + LE+ +L P ++ Y + L+Q
Sbjct: 142 LPW---HVVALEEVFSLPPSVLRCSAQEPAGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQ 198
Query: 206 --------------------FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLN 245
A+ ++++F +V TL++++ LLQTLR +L+L A+
Sbjct: 199 GKELSPQPRLDPQSLASPPAAAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHG 258
Query: 246 CTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYY 305
+K+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +Y
Sbjct: 259 YSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFY 318
Query: 306 NIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----D 361
N + V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL
Sbjct: 319 NRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKAPRDG 378
Query: 362 LTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASK 421
+ + + CLLC LD A ++++ GA SR LS + +SP
Sbjct: 379 PAAGDSSPCCLLCMCALDVDAADSATAFGAQTSSR---------LSQM----QSP----- 420
Query: 422 VTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYA 481
T + +T ++ GS P V +Q + R ED + ++ LCY+
Sbjct: 421 --TPLTET--------RTPPGSCCSPG--VGRVQGC-GQGACRREDPQA--CIEEQLCYS 465
Query: 482 CQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
C+ +KD+ S + IL + + +IRD L+
Sbjct: 466 CRVNMKDLPSLDPLPPYILAEAQLRTQRAWVLQEIRDCLI 505
>gi|354465342|ref|XP_003495139.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Cricetulus
griseus]
Length = 537
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 247/516 (47%), Gaps = 93/516 (18%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
++ C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG S
Sbjct: 25 EQKCVKCAEGLPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPS 84
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK--YFDS 178
S +++ + EG+ S KR+ F IY+D+G+ S+ +R+ A++ ++ F
Sbjct: 85 SSSMVWQVLEGLSQGSAKRLRFVPGVIYVDEGAACGQSLKDREKTLAEVKLILQNTGFPW 144
Query: 179 YFTCLEQAL------------EPDNMKLYTDVAE---------LPLEQFAKDSE------ 211
+ LE+ EP + +A L +E +A ++
Sbjct: 145 HVVALEEVFSLPPSVLCCASQEPAGTEEAYKMAVDSFLQQQHVLGVEGYASPAQGEDQPH 204
Query: 212 ---------------------INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIF 250
++++F ++ TL++++ LLQTLR +L++ A+ K+
Sbjct: 205 PSHSQEPLGMAGSPIAAQTEALSRLFSSIRTLTAKEELLQTLRTHLIVHVARTHGYGKVM 264
Query: 251 TAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFND 310
T E+ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD++ KEV +YN
Sbjct: 265 TGESCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVLVRPMRDYTLKEVAFYNHLFG 324
Query: 311 LSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL---SLDLTSMNV 367
+ V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL D +
Sbjct: 325 VPSVFTPAIDTKAPEKASIHRLMEAFILRLQTLFPSTVSTVYRTSEKLVKAPRDSCATGP 384
Query: 368 NNT-CLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDV 426
+ CLLC LD ++++ GA + SH+
Sbjct: 385 SGPNCLLCMCTLDIDTADSATAFGA------------QSSSHL----------------- 415
Query: 427 NQTVGSQDIPEKSVNGSEDIPN-QIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYV 485
SQ +P ++ G PN G + + V R ED + + LCY C+
Sbjct: 416 -----SQMLPAEA--GMPTPPNCGAGEGQAQSCHRGVGRREDVQA--CIMEQLCYGCRVN 466
Query: 486 VKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+KD+ S + +L + + +I+++L+
Sbjct: 467 MKDLPSLDPLPPYVLAEAQLRSQRAWVSREIQEYLI 502
>gi|51593374|gb|AAH80540.1| C16orf84 protein [Homo sapiens]
Length = 507
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 198/386 (51%), Gaps = 53/386 (13%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 20 CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSS 79
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFT 181
++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++ F +
Sbjct: 80 MVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATGFPWHVV 139
Query: 182 CLEQALEPDNMKLYTDVAEL---------PLEQF-------------------------- 206
LE+ L+ EL ++ F
Sbjct: 140 ALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEEQPPQPP 199
Query: 207 ------------AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAET 254
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K+ T ++
Sbjct: 200 LDPQNLARPPAPAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHVARAHGYSKVMTGDS 259
Query: 255 QTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPV 314
T LA K++ N++LG+GA + D GFSD+ GD++ +RP+RD + KEV +YN + V
Sbjct: 260 CTRLAIKLMTNLALGRGAFLAWDTGFSDEWHGDVVVVRPMRDHTLKEVAFYNRLFSVPSV 319
Query: 315 HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNT 370
P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL + +
Sbjct: 320 FTPAVDTKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAAGDSGPR 379
Query: 371 CLLCKAPLDTRADLASSSMGATRFSR 396
CLLC LD A ++++ GA SR
Sbjct: 380 CLLCMCALDVDAADSATAFGAQTSSR 405
>gi|410217278|gb|JAA05858.1| cytosolic thiouridylase subunit 2 homolog [Pan troglodytes]
gi|410266886|gb|JAA21409.1| cytosolic thiouridylase subunit 2 homolog [Pan troglodytes]
gi|410296192|gb|JAA26696.1| cytosolic thiouridylase subunit 2 homolog [Pan troglodytes]
Length = 515
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 202/387 (52%), Gaps = 54/387 (13%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-- 175
SS +++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATG 141
Query: 176 FDSYFTCLEQ------------ALEP-DNMKLYTDVAELPLEQ----------------- 205
F + LE+ A EP + Y + L+Q
Sbjct: 142 FPWHVVALEEVFSLPPSVLWCSAQEPVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEE 201
Query: 206 -----------------FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K
Sbjct: 202 QPPQPPLDPQNLARPPTPAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSK 261
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 262 VMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRL 321
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTS 364
+ V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL +
Sbjct: 322 FSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAA 381
Query: 365 MNVNNTCLLCKAPLDTRADLASSSMGA 391
+ CLLC LD A ++++ GA
Sbjct: 382 GDSGPRCLLCMCALDVDAADSATAFGA 408
>gi|114664097|ref|XP_001137658.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 2 [Pan
troglodytes]
Length = 515
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 202/387 (52%), Gaps = 54/387 (13%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-- 175
SS +++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATG 141
Query: 176 FDSYFTCLEQ------------ALEP-DNMKLYTDVAELPLEQ----------------- 205
F + LE+ A EP + Y + L+Q
Sbjct: 142 FPWHVVALEEVFSLPPSVLWCSAQEPVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEE 201
Query: 206 -----------------FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K
Sbjct: 202 QPPQPPLDPQNLARPPTPAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSK 261
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 262 VMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRL 321
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTS 364
+ V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL +
Sbjct: 322 FSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAA 381
Query: 365 MNVNNTCLLCKAPLDTRADLASSSMGA 391
+ CLLC LD A ++++ GA
Sbjct: 382 GDSGPRCLLCMCALDVDAADSATAFGA 408
>gi|380812454|gb|AFE78101.1| cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Macaca mulatta]
gi|383418073|gb|AFH32250.1| cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Macaca mulatta]
gi|384946858|gb|AFI37034.1| cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Macaca mulatta]
Length = 514
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 148/520 (28%), Positives = 245/520 (47%), Gaps = 94/520 (18%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI-----ATA 172
SS +++ + EG+ S KR+ F I++D+G+ S+ ER A++ AT
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVPGVIFVDEGAAFGKSLEERSKTLAEVKPILQATG 141
Query: 173 MKYFDSYFTCLEQ--ALEPDNMKL-----------YTDVAELPLEQ-------------- 205
+ + + LE+ +L P ++ Y + L+Q
Sbjct: 142 LPW---HVVALEEVFSLPPSVLRCSAQEPAGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQ 198
Query: 206 --------------------FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLN 245
A+ ++++F +V TL++++ LLQTLR +L+L A+
Sbjct: 199 GKEQPPQPRLDPQSLASPPAAAQPEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHG 258
Query: 246 CTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYY 305
+K+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +Y
Sbjct: 259 YSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFY 318
Query: 306 NIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----D 361
N + V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL
Sbjct: 319 NRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKAPRDG 378
Query: 362 LTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASK 421
+ + + CLLC LD D A S AT F S ++ Q + + +P
Sbjct: 379 PAAGDSSPCCLLCMCALDV--DAADS---ATAFGAQTSRLSQMQSPTPLTETRTPPGPC- 432
Query: 422 VTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYA 481
+ V + G + R ED + ++ LCY+
Sbjct: 433 CSPGVGRVQGC--------------------------GQGACRREDPQA--CIEEQLCYS 464
Query: 482 CQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
C+ +KD+ S + IL + + +IRD L+
Sbjct: 465 CRVNMKDLPSLDPLPPYILAEAQLRTQRAWVLQEIRDCLI 504
>gi|426383212|ref|XP_004058181.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 1
[Gorilla gorilla gorilla]
Length = 515
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 204/392 (52%), Gaps = 54/392 (13%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-- 175
SS +++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATG 141
Query: 176 FDSYFTCLEQ------------ALEP-DNMKLYTDVAELPLEQ----------------- 205
F + LE+ A EP + Y + L+Q
Sbjct: 142 FPWHVVALEEVFSLPPSVLWCSAQEPVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEE 201
Query: 206 -----------------FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K
Sbjct: 202 QPPQPPLDPQNLARPPAAAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSK 261
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 262 VMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRL 321
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTS 364
+ V P++ T A AS+ + E+F+ LQ FPSTVSTV+RT++KL +
Sbjct: 322 FSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQAQFPSTVSTVYRTSEKLVKGPRDGPAA 381
Query: 365 MNVNNTCLLCKAPLDTRADLASSSMGATRFSR 396
+ + CLLC LD A ++++ GA SR
Sbjct: 382 GDSSPRCLLCMCALDVDAADSATAFGAQTSSR 413
>gi|426383214|ref|XP_004058182.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 485
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 204/392 (52%), Gaps = 54/392 (13%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-- 175
SS +++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATG 141
Query: 176 FDSYFTCLEQ------------ALEP-DNMKLYTDVAELPLEQ----------------- 205
F + LE+ A EP + Y + L+Q
Sbjct: 142 FPWHVVALEEVFSLPPSVLWCSAQEPVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEE 201
Query: 206 -----------------FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K
Sbjct: 202 QPPQPPLDPQNLARPPAAAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSK 261
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 262 VMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRL 321
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTS 364
+ V P++ T A AS+ + E+F+ LQ FPSTVSTV+RT++KL +
Sbjct: 322 FSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQAQFPSTVSTVYRTSEKLVKGPRDGPAA 381
Query: 365 MNVNNTCLLCKAPLDTRADLASSSMGATRFSR 396
+ + CLLC LD A ++++ GA SR
Sbjct: 382 GDSSPRCLLCMCALDVDAADSATAFGAQTSSR 413
>gi|114664099|ref|XP_001137499.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Pan
troglodytes]
Length = 485
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 202/387 (52%), Gaps = 54/387 (13%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-- 175
SS +++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATG 141
Query: 176 FDSYFTCLEQ------------ALEP-DNMKLYTDVAELPLEQ----------------- 205
F + LE+ A EP + Y + L+Q
Sbjct: 142 FPWHVVALEEVFSLPPSVLWCSAQEPVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEE 201
Query: 206 -----------------FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K
Sbjct: 202 QPPQPPLDPQNLARPPTPAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSK 261
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 262 VMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRL 321
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTS 364
+ V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL +
Sbjct: 322 FSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAA 381
Query: 365 MNVNNTCLLCKAPLDTRADLASSSMGA 391
+ CLLC LD A ++++ GA
Sbjct: 382 GDSGPRCLLCMCALDVDAADSATAFGA 408
>gi|402909288|ref|XP_003917354.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 2 [Papio
anubis]
Length = 485
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 207/395 (52%), Gaps = 60/395 (15%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI-----ATA 172
SS +++ + EG+ S KR+ F I++D+G+ S+ ER A++ AT
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVPGVIFVDEGAAFGKSLEERSKTLAEVKPILQATG 141
Query: 173 MKYFDSYFTCLEQ--ALEPDNMKL-----------YTDVAELPLEQ-------------- 205
+ + + LE+ +L P ++ Y + L+Q
Sbjct: 142 LPW---HVVALEEVFSLPPSVLRCSAQEPAGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQ 198
Query: 206 --------------------FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLN 245
A+ ++++F +V TL++++ LLQTLR +L+L A+
Sbjct: 199 GKELSPQPRLDPQSLASPPAAAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHG 258
Query: 246 CTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYY 305
+K+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +Y
Sbjct: 259 YSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFY 318
Query: 306 NIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----D 361
N + V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL
Sbjct: 319 NRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKAPRDG 378
Query: 362 LTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSR 396
+ + + CLLC LD A ++++ GA SR
Sbjct: 379 PAAGDSSPCCLLCMCALDVDAADSATAFGAQTSSR 413
>gi|380025327|ref|XP_003696426.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Apis
florea]
Length = 495
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 236/489 (48%), Gaps = 63/489 (12%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C +V L+ K+ YCK C L L HKFRA LGKSK +R D VL+A SG +S
Sbjct: 40 FCKKCGCQEVQVFLKNKNQYCKMCFLTILIHKFRATLGKSKSVRANDTVLIAHSGKANST 99
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERK------ANNAQIATAMKYF 176
LLHL+ + S K++ F +YIDDG I + SI ER+ A A+ Y
Sbjct: 100 VLLHLITADVNKSISKKLKFPFKVLYIDDGIIKKRSIEERESIRNALAKEAESLQLTMYI 159
Query: 177 DSYFTCL----EQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTL 232
S C + L+ N+ L E D+ + ++F + ++R LLQ L
Sbjct: 160 SSLSKCTIDTTYKELQSINVPLMNTTKE--------DTMLQEIFNNLENDTARDELLQQL 211
Query: 233 RQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLR 292
R+ LL+ AA+KLNC KIF A+T DLA K++ ++S G+GA + +V FSD+R D+ LR
Sbjct: 212 RRKLLVSAARKLNCNKIFIADTSLDLAIKVLGDVSTGRGAQLSFNVAFSDERYSDVKLLR 271
Query: 293 PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVF 352
PLRDF+ ++I Y +L P+ P P AS++ A++FV L + F STVST++
Sbjct: 272 PLRDFTKDDIIAYVECCELHPILNPQKYDFCFP-ASIRNIAKNFVYKLDSEFYSTVSTIY 330
Query: 353 RTADKLSLDLTSMN--------------VNNTCLLCKAPLDTRADLASSSMG---ATRFS 395
RT++KL+ ++ +N NN C+LC+ L+ + A FS
Sbjct: 331 RTSEKLATNVEPLNNINSDTKIITNKIDANNICVLCELNFKDSDYLSKEELSVVQAKLFS 390
Query: 396 RYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQ 455
+ VS T L + T+ S +I E+S N + N +
Sbjct: 391 KLVSTITNIPLDMM-------------------TMNSLNICEQSSNEQSECVNAFTSKRC 431
Query: 456 YTPNEKVSRTEDNEGPDNLQRSLCYACQYV---VKDMTSDKDIGEGILKKCLQEKSLNEM 512
K +++ LCY+C+ + VK M + + IL +E + +
Sbjct: 432 QC---KADICNSFLKQSMIEKYLCYSCRLIFLNVKKM--NNTLPNFILDAIQKELQIANL 486
Query: 513 EDQIRDFLL 521
+ +I DFLL
Sbjct: 487 KKEITDFLL 495
>gi|345320828|ref|XP_001521802.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like, partial
[Ornithorhynchus anatinus]
Length = 542
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 241/516 (46%), Gaps = 87/516 (16%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
++ C +C +++R D +CK C Y HKFRA LGK++++ P +KVL+A+SG
Sbjct: 1 GERKCMKCKEGLPVLIIRAGDAFCKECFKAYYIHKFRAMLGKNRLIFPGEKVLLAWSGGP 60
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FD 177
SS +++ +QEG+ S KR+ F+ +Y+D+G++ S +R+ AQ + ++ F
Sbjct: 61 SSSSMISQVQEGLSRESAKRLRFAPGIVYVDEGAVCGRSPEDREKTLAQAESVLQTTGFP 120
Query: 178 SYFTCLEQAL-------------EPDNMKLYTDV------------------------AE 200
+ LE+ P + Y + E
Sbjct: 121 YHVVPLEEVFNLPASVLRCPSKDPPGSGHNYKEAVDGFIRQQRRLRGGEGEEAFSGGEPE 180
Query: 201 LP-------LEQF--------AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLN 245
+P L F A + + ++F + TL++++ LLQTLR +L+L A++
Sbjct: 181 VPPKSRQNGLSPFPGGKSPATAHTAALTQLFGSAKTLTAKEELLQTLRSHLILHLAREKG 240
Query: 246 CTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYY 305
+K+ ++ T LA K++ N++LG+GA + LD GFSD R GD++ +RP+RD + KE+ +Y
Sbjct: 241 YSKVMMGDSCTRLAIKLMTNLALGRGAFLALDTGFSDSRHGDVVVIRPMRDHTLKEIAFY 300
Query: 306 NIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTS 364
N + V ++ T A S+ + E F+ LQ FPSTVSTV+RT++KL
Sbjct: 301 NRMFAVPSVFSVAIDTKAPEKTSIHRLMEGFILKLQAEFPSTVSTVYRTSEKLIQPPPDG 360
Query: 365 MNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTT 424
CLLC+ +D D +++ AT+ S +S R+Q +E+P +
Sbjct: 361 RRPPLRCLLCQCHVDVDRDGTATAFWATQISEQLS---RKQPRPPPPPAEAPGWSC---- 413
Query: 425 DVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQY 484
+G P + EK SR N + LCY+C+
Sbjct: 414 ---------------CSGGAGDPQGCCKNTRPAAREKDSRA-------NFLQLLCYSCRV 451
Query: 485 VVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFL 520
++D+ S + IL + ++ N +D +FL
Sbjct: 452 TMRDLPSTESFPPYILT---EARTRNHRKDSRANFL 484
>gi|417411334|gb|JAA52107.1| Putative cytoplasmic trna 2-thiolation protein 2, partial [Desmodus
rotundus]
Length = 516
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 198/392 (50%), Gaps = 64/392 (16%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
+K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 21 GEKKCVKCKEGLPVVVIRSGDAFCRDCFKAFYVHKFRAVLGKNRLIFPGEKVLLAWSGGP 80
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY---- 175
SS +++ + EG+ S KR+ F +Y+D+G+ S+ +R A+I MK
Sbjct: 81 SSSSMVWQVLEGLSRDSAKRLRFVPGVVYVDEGAACGQSLEDR----AKILAEMKLILQT 136
Query: 176 --FDSYFTCLEQ------------ALEPDNMK-LYTDVAELPLEQ--------------- 205
F + LE+ A EP K Y + L+Q
Sbjct: 137 VGFPWHIVALEEVFSLPPSVLRFFAHEPSGTKGAYKAAVDSFLQQQHAPAQGKEQLSQPG 196
Query: 206 ----------------------FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKK 243
A+ ++++F +V TL++++ LLQTLR +L+L A+
Sbjct: 197 TQDPQTPAVSPSAAQTEAQPPTAAQTEALSRLFDSVKTLTAKEELLQTLRTHLILHMART 256
Query: 244 LNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVI 303
+K+ T ++ T LA K++ +++LG+GA + D GF D+R GD++ +RP+RD + KEV+
Sbjct: 257 HGYSKVMTGDSCTRLAIKLMTSLALGRGAFLAWDTGFCDERHGDVVVVRPMRDHTLKEVV 316
Query: 304 YYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLT 363
+YN + V P++ T A AS+ + E+FV LQ FPSTVSTV+RT++KL
Sbjct: 317 FYNRLFAVPSVFTPAIDTKAPEKASIHRLMEAFVLRLQAQFPSTVSTVYRTSEKLVKAPR 376
Query: 364 SMNVNNT----CLLCKAPLDTRADLASSSMGA 391
N CLLC LD ++++ GA
Sbjct: 377 DGNAGGPPGPRCLLCMCTLDIDTADSATAFGA 408
>gi|390478022|ref|XP_003735400.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 2 [Callithrix jacchus]
Length = 510
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 148/521 (28%), Positives = 242/521 (46%), Gaps = 100/521 (19%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 23 SREHK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYIHKFRAMLGKNRLIFPGEKVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-- 175
SS +++ + EG+ S KR+ F I+ID+G+ S ER A++ ++
Sbjct: 82 GPSSSSMVRQVLEGLSQDSAKRLRFVPGVIFIDEGAACGRSPEERAKTLAEVKPILQAIG 141
Query: 176 FDSYFTCLEQ--ALEPDNMKLYTD--------------------------------VAEL 201
F + LE+ +L P ++ + E
Sbjct: 142 FPWHVVALEEVFSLPPSVLRCSSQEPAAPDGAYXAAVDNFLQQHHVLGAGGGPGLAHGEE 201
Query: 202 PLEQ-----------------FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKL 244
PL Q A+ ++ +F +V TL++++ LLQTLR +L+L A+
Sbjct: 202 PLPQPRAQSAWDLQSLVRPPAAAQTEALSHLFCSVRTLTAKEELLQTLRVHLILHVARAH 261
Query: 245 NCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIY 304
+K+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+R+ + KEV +
Sbjct: 262 GYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMREHTLKEVAF 321
Query: 305 YNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTS 364
YN + V P++ T A AS+ + E+F+ LQ FPSTVSTV+RT++KL+
Sbjct: 322 YNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQIQFPSTVSTVYRTSEKLAKAPRD 381
Query: 365 MNVNNT----CLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHAS 420
T CLLC LD ++++ G T LS + +SP
Sbjct: 382 GPAAGTCGPRCLLCMCTLDVDTADSATAFGVQ---------TASHLSQI----QSP---- 424
Query: 421 KVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCY 480
T + +T Q G+ +P SR ED + + LCY
Sbjct: 425 ---TPLTETGTPQ-------------------GLCCSPG-GASRREDPQA--CIAEQLCY 459
Query: 481 ACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
C+ +KD+ S + + IL + + ++RD L+
Sbjct: 460 GCRVNMKDLPSLEPLPPYILAEAQLRTQRAWVLAELRDCLI 500
>gi|431838566|gb|ELK00498.1| Cytoplasmic tRNA 2-thiolation protein 2 [Pteropus alecto]
Length = 508
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 241/504 (47%), Gaps = 80/504 (15%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 27 CMKCKDVLPVVVIRAGDAFCRDCFKVFYVHKFRAVLGKNRLIFPGEKVLLAWSGGPSSSS 86
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFT 181
++ + EG+ S KR+ F +YID+G++ S +R A++ ++ F +
Sbjct: 87 MVWQVLEGLSRDSAKRLRFVPGVVYIDEGAVCGQSPEDRAKTLAEVKLILQTVGFPWHIV 146
Query: 182 CLEQ--ALEPDNMKLYT-------DVAELPLEQF-------------------------- 206
LE+ +L P ++ + ++ ++ F
Sbjct: 147 ALEEVFSLPPSVLRYFAQEPVGTKGAYKVAVDSFLQQQHAPAQGEEQQSQPGTQDPQSPA 206
Query: 207 -----AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATK 261
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K+ T ++ T LA K
Sbjct: 207 GPPTAAQTEALSRLFDSVKTLTAKEELLQTLRTHLILHVARTHGYSKVMTGDSCTRLAIK 266
Query: 262 IIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLAT 321
++ +++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V P++ T
Sbjct: 267 LMTSLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFGVPSVFTPAIDT 326
Query: 322 LADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNTCLLCKAP 377
A AS+ + E+F+ LQ FPSTVSTV+RT++KL + + CLLC
Sbjct: 327 KASEKASIHRLMEAFMLRLQAQFPSTVSTVYRTSEKLVKAPRDSGAAGPLGPRCLLCMCT 386
Query: 378 LDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPE 437
LD D A S AT F S+ ++ Q +E+P A + V +T G
Sbjct: 387 LDI--DTADS---ATAFGAQTSHLSQTQPP--TSPAETPT-APCCSAGVGRTQGCCQ--G 436
Query: 438 KSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIGE 497
G +D ++ LCY C+ +KD+ S +
Sbjct: 437 AGPCGRKDPRGHVIE------------------------QLCYGCRVNMKDLPSLDPLPP 472
Query: 498 GILKKCLQEKSLNEMEDQIRDFLL 521
IL + + +I+++L+
Sbjct: 473 YILAEAQLRSQRAWVSQEIQEYLI 496
>gi|395856941|ref|XP_003800875.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 2 [Otolemur garnettii]
Length = 524
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 194/378 (51%), Gaps = 60/378 (15%)
Query: 74 VVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQ 133
VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +++ + EG+
Sbjct: 38 VVIRAGDAFCRDCFKAFYTHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLS 97
Query: 134 LSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFTCLEQ------ 185
S KR+ F I++D+G+ S +R A++ ++ F Y LE+
Sbjct: 98 QDSAKRLRFVPGVIFVDEGAACGQSPEDRAKTLAEVKLILQTVGFPWYLVALEEVFGLPP 157
Query: 186 ------ALEPDNMKLYTDVA--------ELPLEQFAKDSE-------------------- 211
A EP A P + A+DS
Sbjct: 158 AVLRCSAQEPAGTAGAYKAAVDSFLQQQHTPGTEGAEDSPSLAQQQGQLCQPPPQGPMGL 217
Query: 212 --------------INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
++++F +V TL++++ LLQTLR +L+L A+ +K+ T E+ T
Sbjct: 218 QSPTGPPAAAQTEALSRLFHSVKTLTAKEELLQTLRTHLILHVARAHGYSKVMTGESCTR 277
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVP 317
LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V P
Sbjct: 278 LAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNHLFAVPSVFTP 337
Query: 318 SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNTCLL 373
++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL+ + + CLL
Sbjct: 338 AIDTKAPEKASIHRLMEAFLLRLQTQFPSTVSTVYRTSEKLAKAPRDSHDTAHSEPRCLL 397
Query: 374 CKAPLDTRADLASSSMGA 391
C LD ++++ GA
Sbjct: 398 CLCTLDVDGADSATAFGA 415
>gi|327287782|ref|XP_003228607.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Anolis
carolinensis]
Length = 428
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 184/343 (53%), Gaps = 55/343 (16%)
Query: 66 RCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALL 125
+C + +++R+ D +CK C +Y HKFRA LGK++ + P +KVL+AFSG +S +++
Sbjct: 2 KCKEGSPVLIIRVGDAFCKTCFKEYFIHKFRATLGKNRCIYPGEKVLLAFSGGPASSSMV 61
Query: 126 HLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFTCL 183
+QEG+ + K++ F +YID+G++ S++ R+ ++ T ++ F + L
Sbjct: 62 RQVQEGLSQGAAKKLRFKPGIVYIDEGAVCGQSLAAREDIRNEVETILEATGFPYHLVHL 121
Query: 184 EQALE-------------PDNMKLYTDV------------------------AELPLEQF 206
E+ + PD Y + EL L+
Sbjct: 122 EEVFDLPSSVLHSVSREIPDQSNSYKEAVDDFIKQQREKERDTAELSLRDQQGELSLQDA 181
Query: 207 AKDSEIN----------------KMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIF 250
+++ E+ +FQTV TL++++ LLQTLR +L+L A+ K+
Sbjct: 182 SREEELIDPRKEMPAVSHTEKLINLFQTVKTLTAKEELLQTLRTHLILHVARTNGYGKVM 241
Query: 251 TAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFND 310
++ T +A K++ N+SLG+GA + D GFSD+R GD++ LRP+R++ +KE+ +YN
Sbjct: 242 MGDSCTRVAVKLLTNLSLGRGAFLAADTGFSDNRHGDVLFLRPMREYPAKEIAFYNRLFG 301
Query: 311 LSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFR 353
+ V +P+L T A AS+ + ESF+ LQ+ FPSTVSTV+R
Sbjct: 302 VPSVFIPALDTKASERASIHRLIESFLYKLQSEFPSTVSTVYR 344
>gi|351712933|gb|EHB15852.1| Cytoplasmic tRNA 2-thiolation protein 2 [Heterocephalus glaber]
Length = 522
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 199/388 (51%), Gaps = 60/388 (15%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C + VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 28 CVKCKQGDPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSS 87
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFT 181
++ + EG+ S KR+ F +Y+D+G+ S +R A++ + F +
Sbjct: 88 MVWQVLEGLSQDSAKRLRFVPGVVYVDEGAACGQSPEDRAKTLAEVKQVLHVVNFPWHLV 147
Query: 182 CLEQ--ALEPDNMKL-----------YTDVAELPLEQF-------AKDS----------- 210
LE+ +L P ++ Y + L+Q+ A+DS
Sbjct: 148 ALEEVFSLPPSVLRCCPQEPAGTEGAYKSAVDSFLQQYHVLGAEGAEDSCGRARGEEERP 207
Query: 211 -----------------------EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
+ ++F++V TL++++ LLQTLR +L+L A+ +
Sbjct: 208 WPQSQDPHSLPSPAGPPSAAQTEALCRLFESVRTLTAKEELLQTLRSHLILHVARAHGYS 267
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
K+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 268 KVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNR 327
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL---SLDLTS 364
+ V P++ T A AS+ + E+F+ LQ FPSTVSTV+RT +KL D
Sbjct: 328 LFAVPLVFTPAVDTKAPEKASVHRLMEAFILRLQAQFPSTVSTVYRTGEKLVKAPRDGCG 387
Query: 365 MNVNNT-CLLCKAPLDTRADLASSSMGA 391
+ CLLC LD ++++ GA
Sbjct: 388 GGPSGPRCLLCLCTLDIDTADSATAFGA 415
>gi|307178089|gb|EFN66916.1| Fatty-acid amide hydrolase 2 [Camponotus floridanus]
Length = 934
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 247/470 (52%), Gaps = 49/470 (10%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
LC +C + +V+L + YCK C + +HKFRAALGKSK++R D +LV SG +S
Sbjct: 503 LCRKCRHEDVDVLLIGQSGYCKTCFITMTDHKFRAALGKSKIIRQGDSILVDHSGELNST 562
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK--YFDSYF 180
LLHL++ GM S+HK+++F +YIDDG I +I ER +IA +K F+ Y
Sbjct: 563 VLLHLIKSGMSQSAHKKLIFKTLILYIDDGDIMGRTIDERNILKYKIAKEIKDSGFNGYA 622
Query: 181 TCLEQALEPDNMKLYTDVAELPLEQ---FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLL 237
L Q L +N D+ P++Q + + + + + +SR LL LR+ LL
Sbjct: 623 VSLNQILCEENT---LDIK--PIDQEICYEHEDHLCTILDNLPDNTSRTDLLNQLRRRLL 677
Query: 238 LQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDF 297
+ AA+KL C KIF A++ ++ATK++ +I LG+GA + F D R ++ L+PLR+F
Sbjct: 678 ILAARKLGCNKIFVADSAMEIATKVLGDICLGRGAQLSTLANFCDTRD-EVKILKPLRNF 736
Query: 298 SSKEVIYYNIFNDLSPVHV--PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTA 355
+ +E++YY+ + + + ++ TLA S+Q A +F DL++ F T+ST+FRTA
Sbjct: 737 TQQELVYYSEHYKIKSIKLRESNVTTLA---TSIQALAHNFTADLESQFSGTISTIFRTA 793
Query: 356 DKLSLDLTS-MNVNNTCLLCKAPLD-TRADLASSSMGATRFSRYVSNATREQLSHVIISS 413
+K+S + S N + C+LC A LD T + S+M A S+ +S S++ I
Sbjct: 794 EKISPRINSQQNAEDNCVLCDARLDATSSTEEVSAMRAIEVSKLMS-------SNIEI-- 844
Query: 414 ESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIV--NGMQYTPNEKVSRTEDNEGP 471
K + D EKS S + ++I N + N K T
Sbjct: 845 -------KTSNDKEN--------EKSNYTSLCLEDKIYCNNNTECCKNNKTKIT-----A 884
Query: 472 DNLQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+++ R LCY+C+ + ++ + +L Q +L M ++I DFLL
Sbjct: 885 EDVWRYLCYSCRLIFRNSEILSILPIPLLFAVQQRLALKSMREEINDFLL 934
>gi|196004278|ref|XP_002112006.1| hypothetical protein TRIADDRAFT_55610 [Trichoplax adhaerens]
gi|190585905|gb|EDV25973.1| hypothetical protein TRIADDRAFT_55610 [Trichoplax adhaerens]
Length = 456
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 199/358 (55%), Gaps = 26/358 (7%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
A + C +C ++VLR + YC++C + Y HKFRA +GKSK++R +KVL+AFSG
Sbjct: 18 ASRTCIKCK-EVAQIVLRADNCYCRSCFIAYFTHKFRATIGKSKLIRSNEKVLLAFSGGP 76
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSY 179
S A+L+L+ EG+ + HK++ F ++IDDG+I Q+S +ER+ I T +
Sbjct: 77 RSSAMLYLVHEGLSENIHKKLRFLPGVVFIDDGAILQLSENERRNYLEFIRTTVSKTGFP 136
Query: 180 FTCLEQA-LEPDNMK-------LYTDVA---------------ELPLEQFAKDS-EINKM 215
C + P N L +D++ + +++F D +I ++
Sbjct: 137 LFCESLGKIFPTNQDTNIQSNLLSSDLSNTTRSDATSSSNFDLDTLIKRFKNDELKIVQV 196
Query: 216 FQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVP 275
F+ + ++++ +L LR+ L+ Q A+ TK+ A+ T LA KI+++I+ G+G+ V
Sbjct: 197 FEKLPNSTAKEDMLHILRKKLIQQIAEANGYTKVMFADCGTRLAVKILSDIAQGRGSSVA 256
Query: 276 LDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAES 335
DV F+D+R + +RP+R+F +KEV Y + SL T+ +S+++ E+
Sbjct: 257 HDVTFADERNQAVTLVRPMREFLTKEVANYLTLKSIDYRTRLSLTTMKPVKSSIERLTEN 316
Query: 336 FVTDLQTNFPSTVSTVFRTADKLSL-DLTSMNVNNTCLLCKAPLDTRADLASSSMGAT 392
FVTDLQ +FPSTV+T+ RT DKLS+ D + ++ + C LC + +DT L + T
Sbjct: 317 FVTDLQASFPSTVNTICRTGDKLSVGDTSKIDADAICPLCDSRIDTNNSLEGKTTSKT 374
>gi|73956828|ref|XP_850047.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 3 [Canis
lupus familiaris]
Length = 509
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 234/507 (46%), Gaps = 85/507 (16%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 27 CVKCKDGLPVVVIRAGDAFCRDCFRAFYVHKFRAVLGKNRLIFPGEKVLLAWSGGPSSSS 86
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFD--SYFT 181
++ + EG+ S KR+ F +Y+D+G+ S R A++ ++ F +
Sbjct: 87 MVWQVLEGLSRDSAKRLRFVPGVVYVDEGAACGQSWENRAKTLAEVKLILRSFGFPWHIV 146
Query: 182 CLEQ------------ALEPDNMKLYTDVA------------------------ELPLEQ 205
LE+ A EP + VA P Q
Sbjct: 147 ALEEVFTLPPSVLRCSAQEPVGTEGTYKVAVDSFLQQQHTVGSSPSPTQQEEQLSQPCTQ 206
Query: 206 FAKDSE----------INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQ 255
+D ++++F +V TL++++ LLQTLR +LLL A+ +K+ T ++
Sbjct: 207 DPQDPAGPPPAAHIEALSRLFDSVKTLTAKEELLQTLRGHLLLHVARTHGYSKVMTGDSC 266
Query: 256 TDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
T LA K++ +++LG+GA + D GFSD+R GD++ +RP+R+ + KEV +YN + +
Sbjct: 267 TRLAIKLMTSLALGRGAFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFAVPSIF 326
Query: 316 VPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNNTCLLC 374
P++ T A AS+ + E F+ LQ FPSTVSTV+RT++KL CLLC
Sbjct: 327 TPAIDTKAPEKASIHRLMEGFLLRLQAQFPSTVSTVYRTSEKLVKAPRDGCAAGPRCLLC 386
Query: 375 KAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQD 434
LD ++++ GA T D +QT
Sbjct: 387 MCSLDVDTADSATAFGAQ------------------------------TQDFSQTQPPTP 416
Query: 435 IPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKD 494
+ E ++ + + + R ED++ + LCY C+ +KD+ S
Sbjct: 417 LAEAGAAPMPCCSAEVGRAQKCCQSTLLCRREDSQ----VIEQLCYGCRVNMKDVPSLDS 472
Query: 495 IGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ IL + Q +S +D I+++L+
Sbjct: 473 LPPYILAE-AQFRSQRPSQD-IQEYLV 497
>gi|410984167|ref|XP_003998402.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Felis catus]
Length = 587
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 189/384 (49%), Gaps = 58/384 (15%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 107 CVKCKEGVPVVVIRAGDAFCRDCFRAFYVHKFRAVLGKNRLIFPGEKVLLAWSGGPSSSS 166
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQ--------------- 168
++ + EG+ S KR+ F IY+D+G+ S +R A+
Sbjct: 167 MVWQVLEGLSRDSAKRLRFVPGVIYVDEGAACGQSPEDRAKTVAEMKLVLQTLGFPWHIV 226
Query: 169 -----------------------IATAMKYFDSYF-----------------TCLEQALE 188
+ T DS+ T E+ L
Sbjct: 227 ALEEVFGLSPSVLRCSAREPVGAVGTYKVAVDSFLQQQHTLGTERAGGSPSPTQGEERLS 286
Query: 189 PDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
P + D A P A+ ++++F +V TL++++ L TLR +L+L A+ +K
Sbjct: 287 PPGTQESQDPAGPP--PAAQTEALSRLFGSVKTLTAKEEFLHTLRTHLILHVARTHGYSK 344
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T ++ T LA K++ +++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 345 VMTGDSCTRLAIKLMTSLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRL 404
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNV 367
+ V P++ T A AS+ + E F+ LQ FPSTVSTV+RT++KL
Sbjct: 405 FAVPSVFTPAIDTKAPEKASVHRLMEGFLLRLQAQFPSTVSTVYRTSEKLVKAPRDGCAA 464
Query: 368 NNTCLLCKAPLDTRADLASSSMGA 391
CLLC LD A ++++ GA
Sbjct: 465 GPRCLLCMCTLDVDAADSATAFGA 488
>gi|340714532|ref|XP_003395781.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 A-like [Bombus
terrestris]
Length = 492
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 157/513 (30%), Positives = 241/513 (46%), Gaps = 71/513 (13%)
Query: 45 EEITQNIRVVFSFS-----RADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL 99
+EI +N F + A C +C + +V + ++ YCK C L L HKFRA L
Sbjct: 15 KEIAENTNTSFPINTTEMHNATPFCKKCGSQEVQVFSKNRNEYCKVCFLNILRHKFRATL 74
Query: 100 GKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSI 159
KSK +RP D +LVA SG +S ALLHL+ S K++ S +YIDDG + SI
Sbjct: 75 SKSKSIRPNDSILVAHSGKANSTALLHLIMVDTNESISKKLQPSFKVLYIDDGMVKGRSI 134
Query: 160 SERK------ANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSE-- 211
ERK AN A+ Y C ++ + M+L D P D +
Sbjct: 135 EERKSIRNALANEAKSLQLTTYILPLSKCTSDSISKE-MQLVND----PSMSITSDEDTI 189
Query: 212 INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKG 271
I +MF + ++R LLQ LR+ LL AA KLNC KIF A+ DLA K++ ++S G+G
Sbjct: 190 IQEMFDNLENDTARDELLQQLRRKLLTFAAGKLNCNKIFIADISFDLAIKVLGDVSTGRG 249
Query: 272 AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK 331
+ +P +VGFSD R ++ LRPLRDF+ ++ Y +L P+ + P+ S++
Sbjct: 250 SQLPFNVGFSDTRHTNVTLLRPLRDFTQNDITNYLDCYNLHPIVSSDKYNFSFPI-SIRN 308
Query: 332 AAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNV--------------NNTCLLCKAP 377
FV L + F TVST++RT++KL+ + N NN C+LC+
Sbjct: 309 VTRDFVHKLDSEFYGTVSTIYRTSEKLATKIERFNNENNDTKVDANIKKDNNICILCELT 368
Query: 378 LDT----RADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQ 433
LD+ + L S + A FS+ VS T LS +T+ S
Sbjct: 369 LDSCYLPKEQL--SVVQAKLFSKLVSTITDTSLS--------------------ETMNSL 406
Query: 434 DIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGP----DNLQRSLCYACQYVVKDM 489
+I E+S N+ + + +K D +++ LCY C+ + +
Sbjct: 407 NICEQS-------DNEQIESLNALRQKKCQCQSDIHKSFLTQSTIEKYLCYGCRLIFLNS 459
Query: 490 TSDKDIGEGILKKCLQEK-SLNEMEDQIRDFLL 521
+I + +Q++ + + ++IRDFLL
Sbjct: 460 KQVDNILPNFIFDAVQKRLQVACLREEIRDFLL 492
>gi|301755140|ref|XP_002913441.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Ailuropoda
melanoleuca]
Length = 532
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 193/382 (50%), Gaps = 54/382 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 27 CVKCKEGLPVVVIRAGDAFCRDCFRAFYIHKFRAVLGKNRLIFPGEKVLLAWSGGPSSSS 86
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFT 181
++ + EG+ S KR+ F +Y+D+G+ S +R A + ++ F +
Sbjct: 87 MVWQVLEGLGRDSAKRLRFVPGVVYVDEGAACGQSWKDRARTLADVKLILQTVGFPWHTV 146
Query: 182 CLEQ--ALEP--------------DNMKLYTD-------------VAELP-----LEQFA 207
LE+ AL P N K+ D V P EQ
Sbjct: 147 ALEEVFALPPSVLRCSAQEPVGTMGNYKVAVDSFLQQEHMLGAEGVGGSPNSTQGEEQLG 206
Query: 208 KD-----------------SEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIF 250
+ ++++F +V TL++++ LLQTLR +L+L A+ +K+
Sbjct: 207 QPCTQDPQHPAGPPPADQTEALSRLFDSVKTLTAKEELLQTLRTHLILHVARTHGYSKVM 266
Query: 251 TAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFND 310
T ++ T LA K++ +++LG+GA + D GFSD+R GD++ +RP+R+ + KEV +YN
Sbjct: 267 TGDSCTRLAIKLMTSLALGRGAFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFA 326
Query: 311 LSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNN 369
+ V P++ T A AS+ + E F+ LQ FPSTVSTV+RT++KL
Sbjct: 327 VPSVFTPAIDTKAPEKASIHRLMEGFLLRLQAQFPSTVSTVYRTSEKLVKAPRDGCAAGP 386
Query: 370 TCLLCKAPLDTRADLASSSMGA 391
CLLC LD ++++ GA
Sbjct: 387 RCLLCMCLLDVDTADSATAFGA 408
>gi|198437911|ref|XP_002122274.1| PREDICTED: similar to UPF0432 protein C16orf84 homolog B [Ciona
intestinalis]
Length = 432
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 218/439 (49%), Gaps = 64/439 (14%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K C +C ++ +V+ +CK C Y +HKFRA++G++ ++R DKV +A+SG ++S
Sbjct: 21 KACVKCEKDS-VIVVGTNGTFCKDCFEVYFSHKFRASMGRNPLVRHHDKVALAYSGGNNS 79
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFT 181
ALL+L+++G+ ++ K++ F+ I++D+ I S K + F +
Sbjct: 80 SALLNLIKKGLDPATVKKLKFTPGLIFVDE-RILYPSDDYEKVKEIEEIMRNTGFPYHIV 138
Query: 182 CLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAA 241
LE+ ++ TD E+ ++ K+F ++TTL+S+Q L LR LL + A
Sbjct: 139 KLEEVFSTED----TD------EKMTNAEKLEKLFNSITTLTSKQETLYRLRCYLLSRKA 188
Query: 242 KKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT---LRPLRDFS 298
K+L +F ET T LA I++N SLG+G H+P D GFSD + + LRP+R+ S
Sbjct: 189 KELGYDHVFMGETSTRLAINILSNFSLGRGVHLPQDTGFSDGLRFEGVGVKLLRPMREMS 248
Query: 299 SKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
KE+ YN N + V +P+LAT +S+Q E+F+ L FPST TVFRT++KL
Sbjct: 249 MKEIAVYNALNKVPTVFLPNLATSQSVTSSVQNLTENFILGLVAGFPSTEMTVFRTSNKL 308
Query: 359 SLDLTSMNVNNTCLLCKAPLDTRADLA-SSSMGATRFSRYVSNATREQLSHVIISSESPD 417
C LC +DT A ++++ T FS ++ +
Sbjct: 309 HGKNDEKKSRGCCRLCFGAIDTECGTAQATALRHTLFSEAINTS---------------- 352
Query: 418 HASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRS 477
HAS D ++ D+P ++ ++Y NLQ
Sbjct: 353 HASSTYND--SSINIMDVP------------TLIQPLEY---------------QNLQ-- 381
Query: 478 LCYACQYVVKDMTSD-KDI 495
+CYAC+ + K++T D KDI
Sbjct: 382 VCYACRLLGKEVTQDGKDI 400
>gi|328791116|ref|XP_001122723.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Apis
mellifera]
Length = 494
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 242/512 (47%), Gaps = 67/512 (13%)
Query: 45 EEITQNIRV-----VFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL 99
E IT+NI + C +C +V L+ K+ YCK C L HKFRA L
Sbjct: 15 ENITENINTSSFTDIVDIHDTMPFCKKCGCQEVQVFLKNKNQYCKMCFLTMSIHKFRATL 74
Query: 100 GKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSI 159
GKSK +R D VL+A SG +S LLHL+ + S K++ F +YIDDG I + SI
Sbjct: 75 GKSKSVRANDTVLIAHSGKANSTVLLHLITADINKSISKKLKFPFKVLYIDDGVIKKRSI 134
Query: 160 SERK------ANNAQIATAMKYFDSYFTCL-----EQALEPDNMKLYTDVAELPLEQFAK 208
ER+ A A+ Y S C ++ L+ N+ L E
Sbjct: 135 EERESIRNALAKEAENLQLTMYISSLSKCTIDTTTDKELQSINVPLMNTTKE-------- 186
Query: 209 DSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISL 268
D+ + ++F + ++R LLQ LR+ LL+ AA+KLNC K+F A+T DLA K++ ++S
Sbjct: 187 DTMLQEIFNNLENDTARDELLQQLRRKLLVFAARKLNCNKVFIADTSIDLAIKVLGDVST 246
Query: 269 GKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLAS 328
G+G+ + +V FSD+R D+ LRPLRDF+ ++I Y +L P+ P P +S
Sbjct: 247 GRGSQLSFNVAFSDERYSDVKLLRPLRDFTKDDIIAYMECCELHPILNPQKYNFCFP-SS 305
Query: 329 LQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN--------------VNNTCLLC 374
++ A +FV L + F VST++RT++KL+ ++ N VNN C+LC
Sbjct: 306 IRNIARNFVYKLDSEFYGAVSTIYRTSEKLATNVEPFNNINNDTKIVTNKIDVNNICILC 365
Query: 375 KAPL-DTRADLASSSMG---ATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTV 430
+ D+ + L+ + A FS+ VS T L I S + ++ + ++ V
Sbjct: 366 ELNFRDSDSYLSKEELSVVQAKLFSKLVSTITDISLDTTI---NSLNICAQSNNEQSECV 422
Query: 431 GSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMT 490
+ K DI N + +++ LCY+C + ++
Sbjct: 423 NA--FTSKKCQCKTDICNSFLRQSM------------------IEKYLCYSCSLIFLNVK 462
Query: 491 SDKDIGEGILKKCLQ-EKSLNEMEDQIRDFLL 521
+I + +Q E + ++ +I DFLL
Sbjct: 463 KMDNILPNFMFDAIQKELQIANLKKEITDFLL 494
>gi|390340889|ref|XP_790635.3| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like
[Strongylocentrotus purpuratus]
Length = 410
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 171/296 (57%), Gaps = 20/296 (6%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C+ V+ R+KD +C+ C L Y+ H+F+A +GKS+++R ++KVL+AFSG +S A
Sbjct: 24 CMKCD-EAAVVIARVKDAFCRNCFLAYVTHRFKATIGKSRLIRDKEKVLIAFSGGQNSSA 82
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCL 183
+ L+ EG + HKR F IYIDDG I+Q + ER+AN I M ++ +C+
Sbjct: 83 VARLIHEGRSENQHKRFRFVPSLIYIDDGIITQQTPEERRANRETITKLMNAYN-LQSCV 141
Query: 184 EQALEPDNMKLYT----------DVAELPLEQFAKDS-------EINKMFQTVTTLSSRQ 226
E +++L + DVA + +E F S + ++ +V +L++++
Sbjct: 142 VPIEEVFSLRLPSESNPGVKDEDDVA-MAMEHFNHLSIQDQASQRLKEILDSVKSLTAKE 200
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
L++TLR LL AK+ TK+ + T+LA+ +++ ++ G+G VPL+VGF+D+R G
Sbjct: 201 DLVKTLRHRLLADIAKRTGHTKVMLGDNGTNLASWVLSGMAQGRGVTVPLEVGFADNREG 260
Query: 287 DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQT 342
D +RPLR+F S+EV YN + V +P+L T A AS+ K + F+ QT
Sbjct: 261 DSTFVRPLREFPSREVSLYNHLMGVESVCIPTLTTKASQYASINKLTDDFIHGQQT 316
>gi|350411108|ref|XP_003489243.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Bombus
impatiens]
Length = 491
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 236/503 (46%), Gaps = 57/503 (11%)
Query: 45 EEITQNIRVVFSFS-----RADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL 99
EEI +N F + A C +C + +V + ++ YCK C L L HKFRA L
Sbjct: 20 EEIAENANTSFPINTTETHNATPFCKKCGSQEVQVFSKNRNEYCKVCFLNILKHKFRATL 79
Query: 100 GKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSI 159
GKSK + P D +LVA SG +S ALLHL+ K++ S +YIDDG + SI
Sbjct: 80 GKSKSIHPNDSILVAHSGKANSTALLHLIMIDTNELISKKLRPSFKVLYIDDGMVKGRSI 139
Query: 160 SERK------ANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSE-- 211
ERK AN A+ Y C ++ + M+L D P D +
Sbjct: 140 EERKSIRDALANEAKSLQLTTYILPLSKCTSDSISKE-MQLVND----PSMSMTSDEDTM 194
Query: 212 INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKG 271
I +MF + ++R LLQ LR+ LL AA +LNC KIF A+ DLA K++ ++S G+G
Sbjct: 195 IQEMFDNLENDTARDELLQQLRRKLLTSAAGELNCNKIFIADISFDLAIKVLGDVSTGRG 254
Query: 272 AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK 331
+ +P +V FSD R ++ LRPLR F+ ++ Y +L P+ + P+ S++
Sbjct: 255 SQLPFNVAFSDTRHTNVTLLRPLRGFTQNDITNYLGCYNLHPIFSSDKYNFSFPI-SIRN 313
Query: 332 AAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNV--------NNTCLLCKAPLDT--- 380
+FV L + F TVST++RT++KL+ + N NN C+LC+ LD+
Sbjct: 314 VTRNFVRKLDSEFYGTVSTIYRTSEKLATRIEQCNNENNDTKEDNNICILCELTLDSCYL 373
Query: 381 -RADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKS 439
+ L S + A FS+ +S T LS+ + S + + D Q + +K
Sbjct: 374 PKEQL--SVVQAKLFSKLISTITDTSLSNTMNSLNICEQS-----DNEQIESLNALRQKK 426
Query: 440 VNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGI 499
DI + +++ LCY C+ + + +I
Sbjct: 427 CQCQSDIHKSFLR------------------QSTIEKYLCYGCRLIFLNSKQMDNILPNF 468
Query: 500 LKKCLQEK-SLNEMEDQIRDFLL 521
+ +Q++ + + ++IRDFLL
Sbjct: 469 IFDAVQKRLQVARLREEIRDFLL 491
>gi|427782915|gb|JAA56909.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 423
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 197/371 (53%), Gaps = 18/371 (4%)
Query: 44 DEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSK 103
+ E+ N S +DK C C + +VLR KD YCK C + HKFRA LGKSK
Sbjct: 13 ESELAPNAGADAVASTSDKTCKTCG-DTAHLVLRKKDAYCKTCFVANCTHKFRATLGKSK 71
Query: 104 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYI-DDGSISQVSISER 162
+++P +KVLVAFSG SS A+L LL++G +HK++LF +Y+ DD S+
Sbjct: 72 LLKPGNKVLVAFSGGPSSAAMLRLLRDGFSEDTHKKLLFEPSLVYVYDDSSV-------- 123
Query: 163 KANNAQIATAMKYFD-SYFTC-LEQALEPDNMKL--YTDVAELPLEQFAKDSEINKMFQT 218
+ + MK Y+TC L+ + +KL + EL A + Q+
Sbjct: 124 LGTHGDVTDLMKESGFPYYTCSLDSLYSTERLKLDPSSRCPELGDSNGAARTAFAAACQS 183
Query: 219 VTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV 278
TL+ R+ + + LLL+ A+ K+FTAET T LA ++ I+LG+GA + +V
Sbjct: 184 FKTLTDRESFYRLCLRRLLLRLARDNGFLKVFTAETGTSLAATLLTTIALGRGAQLREEV 243
Query: 279 GFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVT 338
GF DDR ++ LRP+R+FSS+EV +N ++ + + + AS+ + +FV
Sbjct: 244 GFVDDRDPRVLLLRPMREFSSEEVQLFNEHCNVRFRAQTAPSAGGESRASVFRLTAAFVN 303
Query: 339 DLQTNFPSTVSTVFRTADKLSLDLTSMNVN----NTCLLCKAPLDTRADLASSSMGATRF 394
LQ NFP+TVSTV+RT DK+ ++ + C +C +PLDT S++ A +
Sbjct: 304 GLQENFPATVSTVWRTGDKIESRPRALAAGQGSSSRCRMCGSPLDTVDVEPCSAVAALQL 363
Query: 395 SRYVSNATREQ 405
+R +S E+
Sbjct: 364 TRDISRLRLEE 374
>gi|403261049|ref|XP_003922948.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Saimiri
boliviensis boliviensis]
Length = 588
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 220/465 (47%), Gaps = 77/465 (16%)
Query: 84 KACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFS 143
+ C + HKFRA LGK++++ P +KVL+A+SG SS +++ + EG+ S KR+ F
Sbjct: 105 RGCFKAFYTHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFV 164
Query: 144 VCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFTCLEQ--ALEPDNMKLYTDVA 199
I++D+G+ S ER A++ ++ F + LE+ +L P ++ +
Sbjct: 165 PGVIFVDEGAACGRSPEERAKTLAEVKPILQTIGFPWHVVALEEVFSLPPSVLRCSSQEP 224
Query: 200 ELPLEQF--AKDS----------------------------------------------- 210
P + A DS
Sbjct: 225 AAPEGAYKAAVDSFLQQQHVLGAGGGPGLAHGEEQLPQPHAQPPWDPQRLLRPPAAVQTE 284
Query: 211 EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK 270
++ +F +V TL++++ LLQTLR +L+L A+ +K+ T ++ T LA K++ N++LG+
Sbjct: 285 ALSHLFCSVRTLTAKEELLQTLRAHLILHVARAHGYSKVMTGDSCTRLAIKLMTNLALGR 344
Query: 271 GAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQ 330
GA + D GFSD+R GD++ +RP+R+ + KEV +YN + V P++ T A AS+
Sbjct: 345 GAFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIH 404
Query: 331 KAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNTCLLCKAPLDTRADLAS 386
+ E+F+ LQT FPSTVSTV+RT++KL + + + CLLC LD A ++
Sbjct: 405 RLMEAFILRLQTQFPSTVSTVYRTSEKLVKAPRDGPGAGDCSPRCLLCMCALDVDAADSA 464
Query: 387 SSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDI 446
++ G S + L+ ESP ++ T P+ S S
Sbjct: 465 TAFGVQTCSHPSQIQSPTSLTETGTPQESPIPLTETGT-----------PQGSCCSSG-- 511
Query: 447 PNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTS 491
G + ++ S ED + + LCY C+ +KD+ S
Sbjct: 512 -----GGRAQSRCQEASSREDPQA--CILEQLCYGCRVNMKDLPS 549
>gi|80861393|ref|NP_001032171.1| cytoplasmic tRNA 2-thiolation protein 2 [Rattus norvegicus]
gi|123780340|sp|Q3B7U4.1|CTU2_RAT RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|78174371|gb|AAI07465.1| Similar to RIKEN cDNA 2310061F22 [Rattus norvegicus]
Length = 528
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 232/488 (47%), Gaps = 92/488 (18%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+++SG
Sbjct: 23 SREQK-CVKCAEGLPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRVIFPGEKVLLSWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK--Y 175
SS +++ + EG+ S KR+ F IY+D+G+ S+ +R A++ +
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVPGVIYVDEGAACGQSLEDRVKTLAEVKRILGNTG 141
Query: 176 FDSYFTCLEQ--ALEPDNMK--------------------------LYTDVAELPLEQ-- 205
F + LE+ +L P ++ L T+ P +
Sbjct: 142 FPFHVVALEEVFSLPPSVLRRASQEPAGTEEAYKAAVDSFLQQQHVLGTEACASPAQGQG 201
Query: 206 ---------------FAKDSE---INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
KD++ ++++F+++ TL++++ LLQTLR +L + A+
Sbjct: 202 QLRPSHSQEPSGTVGHPKDAQTEALSRLFKSIKTLTAKEELLQTLRTHLTVHVARSHGYR 261
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
K+ T E+ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 262 KVMTGESCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVLVRPMRDHTLKEVAFYNR 321
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL----SLDLT 363
+ V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL
Sbjct: 322 LFGVPSVFTPAIDTKAPEKASIHRLMEAFILKLQTLFPSTVSTVYRTSEKLVKAPREGCA 381
Query: 364 SMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVT 423
+ CLLC LD V NA S ++S H S++
Sbjct: 382 TGPSGPNCLLCMCALD------------------VDNAD----SATAFGAQSSSHLSQML 419
Query: 424 TDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQ 483
T T P + G+ + G + + V R ED + LCY+C+
Sbjct: 420 TAEAGT------PTRPCCGAGE-------GQTQSCHRAVGRREDAWA--CIIEQLCYSCR 464
Query: 484 YVVKDMTS 491
+KD+ S
Sbjct: 465 VNMKDLPS 472
>gi|58477373|gb|AAH89862.1| Similar to RIKEN cDNA 2310061F22 [Rattus norvegicus]
Length = 531
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 232/488 (47%), Gaps = 92/488 (18%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+++SG
Sbjct: 26 SREQK-CVKCAEGLPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRVIFPGEKVLLSWSG 84
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK--Y 175
SS +++ + EG+ S KR+ F IY+D+G+ S+ +R A++ +
Sbjct: 85 GPSSSSMVWQVLEGLSQDSAKRLRFVPGVIYVDEGAACGQSLEDRVKTLAEVKRILGNTG 144
Query: 176 FDSYFTCLEQ--ALEPDNMK--------------------------LYTDVAELPLEQ-- 205
F + LE+ +L P ++ L T+ P +
Sbjct: 145 FPFHVVALEEVFSLPPSVLRRASQEPAGTEEAYKAAVDSFLQQQHVLGTEACASPAQGQG 204
Query: 206 ---------------FAKDSE---INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
KD++ ++++F+++ TL++++ LLQTLR +L + A+
Sbjct: 205 QLRPSHSQEPSGTVGHPKDAQTEALSRLFKSIKTLTAKEELLQTLRTHLTVHVARSHGYR 264
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
K+ T E+ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 265 KVMTGESCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVLVRPMRDHTLKEVAFYNR 324
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL----SLDLT 363
+ V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL
Sbjct: 325 LFGVPSVFTPAIDTKAPEKASIHRLMEAFILKLQTLFPSTVSTVYRTSEKLVKAPREGCA 384
Query: 364 SMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVT 423
+ CLLC LD V NA S ++S H S++
Sbjct: 385 TGPSGPNCLLCMCALD------------------VDNAD----SATAFGAQSSSHLSQML 422
Query: 424 TDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQ 483
T T P + G+ + G + + V R ED + LCY+C+
Sbjct: 423 TAEAGT------PTRPCCGAGE-------GQTQSCHRAVGRREDAWA--CIIEQLCYSCR 467
Query: 484 YVVKDMTS 491
+KD+ S
Sbjct: 468 VNMKDLPS 475
>gi|50926101|gb|AAH79393.1| LOC292069 protein, partial [Rattus norvegicus]
Length = 548
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 232/488 (47%), Gaps = 92/488 (18%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+++SG
Sbjct: 43 SREQK-CVKCAEGLPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRVIFPGEKVLLSWSG 101
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK--Y 175
SS +++ + EG+ S KR+ F IY+D+G+ S+ +R A++ +
Sbjct: 102 GPSSSSMVWQVLEGLSQDSAKRLRFVPGVIYVDEGAACGQSLEDRVKTLAEVKRILGNTG 161
Query: 176 FDSYFTCLEQ--ALEPDNMK--------------------------LYTDVAELPLEQ-- 205
F + LE+ +L P ++ L T+ P +
Sbjct: 162 FPFHVVALEEVFSLPPSVLRRASQEPAGTEEAYKAAVDSFLQQQHVLGTEACASPAQGQG 221
Query: 206 ---------------FAKDSE---INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
KD++ ++++F+++ TL++++ LLQTLR +L + A+
Sbjct: 222 QLRPSHSQEPSGTVGHPKDAQTEALSRLFKSIKTLTAKEELLQTLRTHLTVHVARSHGYR 281
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
K+ T E+ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 282 KVMTGESCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVLVRPMRDHTLKEVAFYNR 341
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL----SLDLT 363
+ V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL
Sbjct: 342 LFGVPSVFTPAIDTKAPEKASIHRLMEAFILKLQTLFPSTVSTVYRTSEKLVKAPREGCA 401
Query: 364 SMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVT 423
+ CLLC LD V NA S ++S H S++
Sbjct: 402 TGPSGPNCLLCMCALD------------------VDNAD----SATAFGAQSSSHLSQML 439
Query: 424 TDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQ 483
T T P + G+ + G + + V R ED + LCY+C+
Sbjct: 440 TAEAGT------PTRPCCGAGE-------GQTQSCHRAVGRREDAWA--CIIEQLCYSCR 484
Query: 484 YVVKDMTS 491
+KD+ S
Sbjct: 485 VNMKDLPS 492
>gi|242017076|ref|XP_002429019.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212513865|gb|EEB16281.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 373
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 192/383 (50%), Gaps = 26/383 (6%)
Query: 105 MRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQ-------- 156
M+P D VLVA+SGS +S ALLH+L G+ HK+ LF V +ID+G++ +
Sbjct: 1 MKPNDNVLVAYSGSQASTALLHMLYSGLSEKHHKKFLFKVIVFFIDEGALFENLNPDIRI 60
Query: 157 VSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMF 216
+I E K QI F + L Q L DN + ++ E D ++ K F
Sbjct: 61 KTIDEIK----QIVDGYD-FPFFVASLSQVLNCDNNIKLSSSLDIKNED---DEKLLKFF 112
Query: 217 QTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPL 276
V ++S++ LL L++ L+L+AA +L C KI T+E DLA K+ + SLG+G
Sbjct: 113 NNVNNITSKEDLLYLLKKKLILKAANQLKCNKILTSEVGNDLAVKLFTSFSLGRGDQSSF 172
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSP-VHVPSLATLADPLASLQKAAES 335
+ GF D R D LRPLRDF KE+++YN FN+L+ V+ PS T AS+QK E
Sbjct: 173 ETGFCDSRVSDCKILRPLRDFLMKEIVFYNKFNNLNNFVNRPSFTTGLQSSASIQKLTEK 232
Query: 336 FVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFS 395
F+ +LQ +F STV T+FRT +KL ++L C LC + + S++ + FS
Sbjct: 233 FINNLQNDFSSTVYTIFRTGEKLDINLIENKKKFICYLCDSEIRNNCGSDCSALLSLEFS 292
Query: 396 RYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQ 455
R N E L + ++ +D N+ + D G I N VN +
Sbjct: 293 R---NIVNENLGNC-----KSNNCCGSCSDKNENNKNGDFKNLFCYGCSAILND-VNNFE 343
Query: 456 YTPNEKVSRTEDNEGPDNLQRSL 478
P E + R + + D+++ +
Sbjct: 344 SIPKEFIQRAIEQKNKDSMKEQI 366
>gi|158294544|ref|XP_001237692.2| AGAP005651-PA [Anopheles gambiae str. PEST]
gi|226711462|sp|A0NEF7.2|CTU2_ANOGA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|157015612|gb|EAU76478.2| AGAP005651-PA [Anopheles gambiae str. PEST]
Length = 417
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 214/433 (49%), Gaps = 49/433 (11%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
++LC +CNT + L K+ C+ C L Y+ HKFRA+LG +K++R +VL+ +G
Sbjct: 29 GNELCRKCNTEQAVLKLNQKEPQCRVCFLNYVRHKFRASLGSTKIVRRGSRVLIILTGEP 88
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSIS--ERKANNAQIATAMKYFD 177
+++ LL +++ G++ + K++ +Y+DD + S + ++ A Q+ + F
Sbjct: 89 ANVTLLDMVRFGLEQDAFKQLRIVPVLLYVDDDFVGNTSEARLQQLAERLQVFKQFESFP 148
Query: 178 SYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLL 237
+Y+T + ++ L D A P ++ + ++ V ++SS+Q LL+ +R+
Sbjct: 149 AYYTVCGSS---RHVALTFDGAFSPAGFEQDEARLLQVLDAVRSVSSKQDLLEQVRKQTY 205
Query: 238 LQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDF 297
Q L C +F ++ DLA +++N++LG+G + DV F DDR + +RP+RD
Sbjct: 206 RQIGHALQCAYVFLSDIGVDLAKTLLSNVALGRGCSLAQDVAFCDDRYNTVKLVRPIRDL 265
Query: 298 SSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK 357
+ EV Y +++ P+ S A + SLQ F+ +L +FPSTVSTV+RT DK
Sbjct: 266 NPDEVSNYLQYSE-QPLLSYSPAKHFEDKPSLQNLTAKFIDNLMQSFPSTVSTVYRTGDK 324
Query: 358 LSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPD 417
LD N C C A LD R S ++ AT +SR VS+ SH I +S
Sbjct: 325 --LDAPKAARNECCRFCGAALDYR---GSKTLFATEYSRLVSSRINAACSHEDILLKS-- 377
Query: 418 HASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDN-LQR 476
++ D E++VNG ED++G + L +
Sbjct: 378 --KQMELDA----------ERAVNG-----------------------EDDQGEERVLMK 402
Query: 477 SLCYACQYVVKDM 489
LC+ C+ + +D+
Sbjct: 403 QLCHGCRNIFEDL 415
>gi|194879500|ref|XP_001974245.1| GG21627 [Drosophila erecta]
gi|226711451|sp|B3NM45.1|CTU2_DROER RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|190657432|gb|EDV54645.1| GG21627 [Drosophila erecta]
Length = 404
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 182/344 (52%), Gaps = 21/344 (6%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+GE+ L + C+ C L Y HKFRAALG +K++ +VL+ GS S+
Sbjct: 34 CSKCDVNSGELYKLNFRAAECRECFLTYARHKFRAALGAAKILPRNAEVLLVLDGSAKSL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYF 180
LL +L + KR+ + +Y+++ QV + A ++ +++Y FD Y
Sbjct: 94 VLLDMLHFAQTQNQFKRLHCNARVVYVEE---QQVQDRDPVDLEALLSLSVQYAPFDFYV 150
Query: 181 TCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQA 240
L Q +K Y+ ++E+ Q + +L++RQ LQ R+NL+
Sbjct: 151 IELGQGCSLQRIKDYS-------PSLKANNELIHKLQKLQSLTARQDYLQQQRKNLICSV 203
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSS 299
A+ L CT +F DLAT+++ I+LG+GA LDV DDR +GD+ LRPL+D S
Sbjct: 204 AQSLQCTHVFEPNISVDLATQLLTAIALGRGASAALDVALLDDRLSGDVKLLRPLKDLSE 263
Query: 300 KEVIYYNIFNDLSPVHVPS--LATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK 357
+E+ +Y L P+ P ASLQ +FV +LQ N+ STVSTVFRT DK
Sbjct: 264 QEIQFYIHAQRLKPLFQSGSHYGMERGPTASLQNLTSAFVANLQHNYASTVSTVFRTGDK 323
Query: 358 LSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
++++ S TC+ C++ LD+ S ++ A +SR VS A
Sbjct: 324 IAVN--SDPEQATCVHCQSALDSE---LSDTLLAIEYSRSVSEA 362
>gi|332265766|ref|XP_003281886.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 2 [Nomascus leucogenys]
Length = 496
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 228/512 (44%), Gaps = 88/512 (17%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKA----CLLQYLNHKFRAALGKSKMMRPQDKVLVAFS 116
++ C +C VV+R D +C+ C + HKFRA LG+ +++ P +KVL+A+S
Sbjct: 12 EQKCVKCKEAQPVVVIRAGDAFCRFVLQDCFKIFYVHKFRAMLGRXRLIFPGEKVLLAWS 71
Query: 117 GSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY- 175
G SS +++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++
Sbjct: 72 GGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQAT 131
Query: 176 -FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSR--QYLLQ-- 230
F + LE+ L+ E + A + ++ Q L + L+Q
Sbjct: 132 GFPWHVVALEEVFSLPPSVLWCSAQEPVGSEGAYKAAVDSFLQQQHVLGAGGGPGLIQGE 191
Query: 231 -------------------------------------TLRQNLLLQAAKKLNCTKIFTAE 253
R +L+L A+ +K+ T +
Sbjct: 192 EQPPPPTRDPQSLARPPRPLRAPLPRVLHPPGSXDALCFRTHLILHMARAHGYSKVMTGD 251
Query: 254 TQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSP 313
+ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN +
Sbjct: 252 SCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPS 311
Query: 314 VHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNN 369
V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL + + +
Sbjct: 312 VFTPAVDTKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKAPRDGPAAGDSSP 371
Query: 370 TCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQT 429
CLLC LD A ++++ GA SR ++ Q + + +P + V Q
Sbjct: 372 RCLLCMCALDVDAADSATAFGAQTASRL----SQRQSPTPLTETRTPP-GPCCSPGVGQA 426
Query: 430 VGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDM 489
G+ R ED + ++ LCY+C+ +KD+
Sbjct: 427 QGA------------------------------CRREDPQA--CIEEHLCYSCRVNMKDL 454
Query: 490 TSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
S + IL + + +IRD L+
Sbjct: 455 PSLDPLPPYILAEAQLRTQRAWVLQEIRDCLI 486
>gi|170061200|ref|XP_001866133.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|226711441|sp|B0X911.1|CTU2_CULQU RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|167879534|gb|EDS42917.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 425
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 205/411 (49%), Gaps = 59/411 (14%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
++LC +C N + L LK+ C+ C L Y+ HKFRA+LG +K++R +VLV FSGS
Sbjct: 33 GEELCRKCTVNPSVLKLNLKEPQCRECFLHYVRHKFRASLGATKIVRRGSRVLVVFSGSA 92
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFD-- 177
++ +L +++ G+Q S K++ +++ + + + ER + +K F+
Sbjct: 93 ENVVMLDMIRYGLQQESFKKLRIEPVVVFVSEDHVGRED-GERVGVVQEKVRILKQFEFR 151
Query: 178 SYFTCLEQ----ALEPDNMKLYTDVAELPLEQFAKD-SEINKMFQTVTTLSSRQYLLQTL 232
SYF+ + A+E ++ LE+++++ + NK+ + +S+Q +
Sbjct: 152 SYFSVIGAKECVAVEDSDL----------LERYSEERARFNKILSGFKSATSKQDFIVQN 201
Query: 233 RQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLR 292
R+ L AK+L+C +F ++ DLA +++N++LG+G + LD+ F DDR +R
Sbjct: 202 RKQTLKVIAKRLDCPYVFLSDIGLDLAKTLLSNVALGRGRSLALDIAFCDDRDEQHKIIR 261
Query: 293 PLRDFSSKEVIYY--NIFNDLSPVHVPSLATLADPLA---SLQKAAESFVTDLQTNFPST 347
P+RD + E+ Y + N+LS + TL DP SLQ FV LQ +PST
Sbjct: 262 PMRDLNPDEIENYLKHADNELSYI------TLEDPFKDKPSLQNLTCKFVDGLQRTYPST 315
Query: 348 VSTVFRTADKL-----------------------SLDLTSMNVNNTCLLCKAPLDTRADL 384
VSTVFRT DK+ SL L S + + C C + LD
Sbjct: 316 VSTVFRTGDKMSCETVKPTAENDDDQDLLSLFDQSLRLNSSSTSVRCKFCHSALDFH--- 372
Query: 385 ASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDI 435
S+++ AT FSR VS+ +LSH I S ++ D + V +++
Sbjct: 373 GSTTLFATEFSRMVSSRINVELSHEAIVESS----KRMEEDARRRVNGEEV 419
>gi|195484481|ref|XP_002090713.1| GE12647 [Drosophila yakuba]
gi|226711446|sp|B4PAZ6.1|CTU2_DROYA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|194176814|gb|EDW90425.1| GE12647 [Drosophila yakuba]
Length = 404
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 184/345 (53%), Gaps = 23/345 (6%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+ E+ L ++ C+ C L Y HKFRAALG +K++ +VL+ GS S+
Sbjct: 34 CSKCDVNSNELYKLNFREAECRECFLAYARHKFRAALGAAKILPRNAEVLLVLDGSAKSL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQ---VSISERKANNAQIATAMKYFDSY 179
LL +L ++ KR+ +V +Y+++ + V + + + + Q A F+ Y
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCNVHVVYVEEQHVQDRDPVGLEDLLSVSRQYAP----FEFY 149
Query: 180 FTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQ 239
L Q +K Y+ ++E+ Q + +L++RQ LQ R+NL+
Sbjct: 150 VIELGQGCSLQRIKDYS-------PSLKANNELIYKLQKLQSLTARQDYLQQHRKNLICS 202
Query: 240 AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFS 298
A+ L+CT +F + DLAT+++ I+LG+GA LDV DDR +GD+ LRPL+D S
Sbjct: 203 VAQSLHCTHVFESNISVDLATQLLTAIALGRGASAALDVALLDDRLSGDVKLLRPLKDLS 262
Query: 299 SKEVIYYNIFNDLSPV--HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
+E+ +Y L P+ + AS+Q +FV +LQ N+ STVSTVFRT D
Sbjct: 263 EQEITFYIHAQRLKPLFQNGSHYGMERGQTASIQNLTSAFVANLQQNYASTVSTVFRTGD 322
Query: 357 KLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
K++++ S +C+ C++ LD+ S ++ A +SR VS A
Sbjct: 323 KIAVN--SNPEQASCVHCRSALDSE---LSDTLLAIEYSRSVSEA 362
>gi|348550284|ref|XP_003460962.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Cavia
porcellus]
Length = 522
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 231/518 (44%), Gaps = 95/518 (18%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA +GK++++ P +KVL+A+SG SS +
Sbjct: 28 CVKCKQGEPVVVIRAGDAFCRDCFKAFYIHKFRAMIGKNRLIFPGEKVLLAWSGGPSSSS 87
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFT 181
++ + EG+ S KR+ F IY+D+G+ S+ +R A++ + F +
Sbjct: 88 MVWQVLEGLSQHSAKRLRFVPGVIYVDEGAACGRSLEDRAKTLAEVKQVLHTVGFPWHVV 147
Query: 182 CLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTL----SSRQYLL-------- 229
LE+ L EL + A + ++ Q TL + Y L
Sbjct: 148 SLEEVFGLPPSVLRCCPQELAGTEGAYKAAVDSFLQHQHTLQVEGAGDSYSLARGDEEQS 207
Query: 230 --------------------------------QTL--RQNLL--------LQAAKKLNCT 247
QTL ++ LL L A+ +
Sbjct: 208 WPQSQDPHGPPSPAASPSAAQTEALCRLFESVQTLTAKEELLQTLRSHLILHVARAHGYS 267
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
K+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 268 KVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNR 327
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL----SLDLT 363
+ V P++ T A AS+ + E+F+ LQ FPSTVSTV+RT++KL D
Sbjct: 328 LFAVPSVFTPAVDTKAPEKASIHRLMEAFILQLQAQFPSTVSTVYRTSEKLVKAPREDCA 387
Query: 364 SMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVT 423
CLLC LD A ++++ GA +T Q+ + +E+
Sbjct: 388 GEPEGPRCLLCLCILDIDAADSATAFGA-------QTSTLSQMPPSALQAEA-------- 432
Query: 424 TDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQ 483
G++ P +V + G + K R E + +Q+ LCY+C+
Sbjct: 433 -------GTRTAPCCAVGRA--------PGCCW----KACRREHDSQTQVIQQ-LCYSCR 472
Query: 484 YVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+KD+ S + IL + + +I+D+L+
Sbjct: 473 GNMKDLPSLDPLPPYILAEAQLRSQRARVMQEIQDYLI 510
>gi|20129633|ref|NP_609975.1| CG10189, isoform A [Drosophila melanogaster]
gi|442628417|ref|NP_001260585.1| CG10189, isoform B [Drosophila melanogaster]
gi|74869315|sp|Q9VIV3.1|CTU2_DROME RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|7298594|gb|AAF53811.1| CG10189, isoform A [Drosophila melanogaster]
gi|440213943|gb|AGB93120.1| CG10189, isoform B [Drosophila melanogaster]
Length = 405
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 184/343 (53%), Gaps = 18/343 (5%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+GE+ L + C+ C L Y HKFRAALG +K++ +VL+ GS S+
Sbjct: 34 CSKCDVNSGELYKLNFRTAECRECFLAYARHKFRAALGAAKILPRNAEVLLVLDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ + +Y+++ + + +A +++T FD Y
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCNARVVYVEEQQVQGRDPVDLEALQ-RLSTQYAPFDFYV-- 150
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
+E P +++ D + ++E+ Q + +L++RQ LQ R+NL+ A+
Sbjct: 151 IELGALPSSLQRIKDYSPF----LNANNELIHKLQKLRSLTARQDYLQQQRKNLICSVAQ 206
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSKE 301
L CT +F + DLAT+++ I+LG+G LDV DDR +GD+ LRPL+D + +E
Sbjct: 207 CLQCTHVFESNISVDLATQLLTAIALGRGGSAALDVALLDDRLSGDVKLLRPLKDLTEQE 266
Query: 302 VIYYNIFNDLSPVHVPSLATLA---DPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
+ +Y L P H + ASLQ +FV +LQ NF STVSTVFRT DK+
Sbjct: 267 IQFYIHAQRLKP-HFQKGSRYGMEHGETASLQNLTSAFVANLQQNFASTVSTVFRTGDKI 325
Query: 359 SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
+++ S ++C+ C++ LD+ S ++ A +SR VS A
Sbjct: 326 AVN--SNPEQSSCVHCRSTLDSE---LSDTLLAIEYSRSVSEA 363
>gi|21391966|gb|AAM48337.1| GH12861p [Drosophila melanogaster]
Length = 388
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 184/343 (53%), Gaps = 18/343 (5%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+GE+ L + C+ C L Y HKFRAALG +K++ +VL+ GS S+
Sbjct: 17 CSKCDVNSGELYKLNFRTAECRECFLAYARHKFRAALGAAKILPRNAEVLLVLDGSAESL 76
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ + +Y+++ + + +A +++T FD F
Sbjct: 77 VLLDMLHFAQTQNTFKRLHCNARVVYVEEQQVQGRDPVDLEALQ-RLSTQYAPFD--FYV 133
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
+E P +++ D + ++E+ Q + +L++RQ LQ R+NL+ A+
Sbjct: 134 IELGALPSSLQRIKDYSPF----LNANNELIHKLQKLRSLTARQDYLQQQRKNLICSVAQ 189
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSKE 301
L CT +F + DLAT+++ I+LG+G LDV DDR +GD+ LRPL+D + +E
Sbjct: 190 CLQCTHVFESNISVDLATQLLTAIALGRGGSAALDVALLDDRLSGDVKLLRPLKDLTEQE 249
Query: 302 VIYYNIFNDLSPVHVPSLATLA---DPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
+ +Y L P H + ASLQ +FV +LQ NF STVSTVFRT DK+
Sbjct: 250 IQFYIHAQRLKP-HFQKGSRYGMEHGETASLQNLTSAFVANLQQNFASTVSTVFRTGDKI 308
Query: 359 SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
+++ S ++C+ C++ LD+ S ++ A +SR VS A
Sbjct: 309 AVN--SNPEQSSCVHCRSTLDSE---LSDTLLAIEYSRSVSEA 346
>gi|209418032|gb|ACI46554.1| SD23994p [Drosophila melanogaster]
Length = 411
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 184/343 (53%), Gaps = 18/343 (5%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+GE+ L + C+ C L Y +HKFRAALG +K++ +VL+ GS S+
Sbjct: 40 CSKCDVNSGELYKLNFRTAECRECFLAYASHKFRAALGAAKILPRNAEVLLVLDGSAESL 99
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ + +Y+++ + + +A +++T FD Y
Sbjct: 100 VLLDMLHFAQTQNTFKRLHCNARVVYVEEQQVQGRDPVDLEALQ-RLSTQYAPFDFYV-- 156
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
+E P +++ D + ++E+ Q + +L++RQ LQ R+NL+ A+
Sbjct: 157 IELGALPSSLQRIKDYSPF----LNANNELIHKLQKLRSLTARQDYLQQQRKNLICSVAQ 212
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSKE 301
L CT +F + DLAT+++ I+LG+G LDV DDR +GD+ LRPL+D + +E
Sbjct: 213 CLQCTHVFESNISVDLATQLLTAIALGRGGSAALDVALLDDRLSGDVKLLRPLKDLTEQE 272
Query: 302 VIYYNIFNDLSPVHVPSLATLA---DPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
+ +Y L P H + ASLQ +FV +LQ NF STVSTVFRT DK+
Sbjct: 273 IQFYIHAQRLKP-HFQKGSRYGMEHGETASLQNLTSAFVANLQQNFASTVSTVFRTGDKI 331
Query: 359 SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
+ + S ++C+ C++ LD+ S ++ A +SR VS A
Sbjct: 332 AAN--SNPEQSSCVHCRSTLDSE---LSDTLLAIEYSRSVSEA 369
>gi|195345119|ref|XP_002039123.1| GM17005 [Drosophila sechellia]
gi|226711442|sp|B4I5W3.1|CTU2_DROSE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|194134253|gb|EDW55769.1| GM17005 [Drosophila sechellia]
Length = 405
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 180/342 (52%), Gaps = 16/342 (4%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+GE+ L + C+ C L Y HKFRAALG +K++ +VL+ GS S+
Sbjct: 34 CSKCDVNSGELYKLNFRTAECRECFLAYARHKFRAALGAAKILPRNAEVLLVLDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ + +Y+++ + +A ++T FD Y
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCNARVVYVEEQKVQGRDPVHLEALQ-NLSTQYAPFDFYV-- 150
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
+E P +M+ D + ++E+ Q + +L++RQ LQ R+NL+ A+
Sbjct: 151 IELGALPSSMQRIKDYSP----SLNANNELIHKLQKLRSLTARQDYLQQQRKNLICSVAQ 206
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSKE 301
L CT +F + DLAT+++ I+LG+G LDV DDR +GD+ LRPL+D + +E
Sbjct: 207 CLQCTHVFESNISVDLATQLLTAIALGRGGSAALDVALLDDRLSGDVKLLRPLKDLNEQE 266
Query: 302 VIYYNIFNDLSPVHVPS--LATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
+ +Y L P+ ASLQ +FV +LQ N+ STVSTVFRT DK++
Sbjct: 267 IQFYIHAQRLKPLFEKGSCFGREHGQTASLQNLTSAFVANLQQNYASTVSTVFRTGDKIA 326
Query: 360 LDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
+ S ++C+ C++ LD+ S ++ A +SR VS A
Sbjct: 327 AN--SNPEQSSCVHCRSTLDSE---ISDTLLAIEYSRTVSEA 363
>gi|397468260|ref|XP_003805811.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 1 [Pan
paniscus]
Length = 454
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 181/346 (52%), Gaps = 53/346 (15%)
Query: 99 LGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVS 158
LGK++++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S
Sbjct: 2 LGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQS 61
Query: 159 ISERKANNAQIATAMKY--FDSYFTCLEQ------------ALEP-DNMKLYTDVAELPL 203
+ ER A++ ++ F + LE+ A EP + Y + L
Sbjct: 62 LEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQEPVGSEGAYKAAVDSFL 121
Query: 204 EQ----------------------------------FAKDSEINKMFQTVTTLSSRQYLL 229
+Q A+ ++++F +V TL++++ LL
Sbjct: 122 QQQHVLGAGSGPGPTQGEEQPPQPPLDPQNLARPPAPAQTEALSQLFCSVRTLTAKEELL 181
Query: 230 QTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDII 289
QTLR +L+L A+ +K+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++
Sbjct: 182 QTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVV 241
Query: 290 TLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVS 349
+RP+RD + KEV +YN + V P++ T A AS+ + E+F+ LQT FPSTVS
Sbjct: 242 VVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPSTVS 301
Query: 350 TVFRTADKLSL----DLTSMNVNNTCLLCKAPLDTRADLASSSMGA 391
TV+RT++KL + + CLLC LD A ++++ GA
Sbjct: 302 TVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDAADSATAFGA 347
>gi|297284659|ref|XP_002802637.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Macaca
mulatta]
Length = 453
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 224/479 (46%), Gaps = 93/479 (19%)
Query: 99 LGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVS 158
LGK++++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+G+ S
Sbjct: 2 LGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPGVIFVDEGAAFGKS 61
Query: 159 ISERKANNAQI-----ATAMKYFDSYFTCLEQ--ALEPDNMKL-----------YTDVAE 200
+ ER A++ AT + + + LE+ +L P ++ Y +
Sbjct: 62 LEERSKTLAEVKPILQATGLPW---HVVALEEVFSLPPSVLRCSAQEPAGSEGAYKAAVD 118
Query: 201 LPLEQ----------------------------------FAKDSEINKMFQTVTTLSSRQ 226
L+Q A+ ++++F +V TL++++
Sbjct: 119 SFLQQQHVLGAGGGPGPTQGKEQPPQPRLDPQSLASPPAAAQPEALSQLFCSVRTLTAKE 178
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
LLQTLR +L+L A+ +K+ T ++ T LA K++ N++LG+GA + D GFSD+R G
Sbjct: 179 ELLQTLRSHLILHMARAHGYSKVMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHG 238
Query: 287 DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPS 346
D++ +RP+RD + KEV +YN + V P++ T A AS+ + E+F+ LQT FPS
Sbjct: 239 DVVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEKASIHRLMEAFILRLQTQFPS 298
Query: 347 TVSTVFRTADKLSL----DLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNAT 402
TVSTV+RT++KL + + + CLLC LD D A S AT F S +
Sbjct: 299 TVSTVYRTSEKLVKAPRDGPAAGDSSPCCLLCMCALDV--DAADS---ATAFGAQTSRLS 353
Query: 403 REQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKV 462
+ Q + + +P + V + G +
Sbjct: 354 QMQSPTPLTETRTPPGPC-CSPGVGRVQGC--------------------------GQGA 386
Query: 463 SRTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
R ED + ++ LCY+C+ +KD+ S + IL + + +IRD L+
Sbjct: 387 CRREDPQA--CIEEQLCYSCRVNMKDLPSLDPLPPYILAEAQLRTQRAWVLQEIRDCLI 443
>gi|242001366|ref|XP_002435326.1| conserved hypothetical protein [Ixodes scapularis]
gi|215498656|gb|EEC08150.1| conserved hypothetical protein [Ixodes scapularis]
Length = 425
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 184/361 (50%), Gaps = 25/361 (6%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C C+ + VVLR KD YC +C L HKFR+ LGKSK+++P+ K+LVAFSG SS A
Sbjct: 29 CKTCD-DTAHVVLRKKDAYCVSCFLAASTHKFRSTLGKSKLIKPKQKILVAFSGGPSSAA 87
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCL 183
+L LL +G +HKR LF +IDD S S ++ ++ ++T
Sbjct: 88 MLTLLLDGFAEDAHKRFLFEPHLAHIDDSVASGKSEADPSLREEAVSLMSSSNLPFYTV- 146
Query: 184 EQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTL----------SSRQYLLQTLR 233
P + + +DV L I ++ TL + R+ +
Sbjct: 147 -----PLELVVCSDVVTLDPATHGSTVPIAEVDGCRRTLASSFSSFKSATDRESFHRITL 201
Query: 234 QNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRP 293
+ LLL+ A+ K+FTAET T LA +++ I+LG+G+ + V F DDR G I LRP
Sbjct: 202 RRLLLKLARDNGFDKVFTAETGTQLAATLLSTIALGRGSQLRDQVSFVDDRDGHIQLLRP 261
Query: 294 LRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFR 353
+R+FS++EV +N +++ P AS+ + E FV LQ +FP+TVST++R
Sbjct: 262 MREFSAEEVDLFNQHRNVTFRQSPPKQA-----ASIVRLTERFVNGLQRDFPATVSTIWR 316
Query: 354 TADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISS 413
T DK++ + +C LC +PLDT +S++ A R +R S + + +S
Sbjct: 317 TGDKIA---PPVRTAGSCSLCGSPLDTVDVPVASAVEALRLTRETSRQREGEGRTSLTTS 373
Query: 414 E 414
E
Sbjct: 374 E 374
>gi|149038392|gb|EDL92752.1| similar to RIKEN cDNA 2310061F22 [Rattus norvegicus]
Length = 503
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 218/460 (47%), Gaps = 91/460 (19%)
Query: 86 CLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVC 145
C + HKFRA LGK++++ P +KVL+++SG SS +++ + EG+ S KR+ F
Sbjct: 25 CFKAFYVHKFRAMLGKNRVIFPGEKVLLSWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPG 84
Query: 146 AIYIDDGSISQVSISERKANNAQIATAMK--YFDSYFTCLEQ--ALEPDNMK-------- 193
IY+D+G+ S+ +R A++ + F + LE+ +L P ++
Sbjct: 85 VIYVDEGAACGQSLEDRVKTLAEVKRILGNTGFPFHVVALEEVFSLPPSVLRRASQEPAG 144
Query: 194 ------------------LYTDVAELPLEQ-----------------FAKDSE---INKM 215
L T+ P + KD++ ++++
Sbjct: 145 TEEAYKAAVDSFLQQQHVLGTEACASPAQGQGQLRPSHSQEPSGTVGHPKDAQTEALSRL 204
Query: 216 FQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVP 275
F+++ TL++++ LLQTLR +L + A+ K+ T E+ T LA K++ N++LG+GA +
Sbjct: 205 FKSIKTLTAKEELLQTLRTHLTVHVARSHGYRKVMTGESCTRLAIKLMTNLALGRGAFLA 264
Query: 276 LDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAES 335
D GFSD+R GD++ +RP+RD + KEV +YN + V P++ T A AS+ + E+
Sbjct: 265 WDTGFSDERHGDVVLVRPMRDHTLKEVAFYNRLFGVPSVFTPAIDTKAPEKASIHRLMEA 324
Query: 336 FVTDLQTNFPSTVSTVFRTADKL----SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGA 391
F+ LQT FPSTVSTV+RT++KL + CLLC LD
Sbjct: 325 FILKLQTLFPSTVSTVYRTSEKLVKAPREGCATGPSGPNCLLCMCALD------------ 372
Query: 392 TRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIV 451
V NA S ++S H S++ T T P + G+ +
Sbjct: 373 ------VDNAD----SATAFGAQSSSHLSQMLTAEAGT------PTRPCCGAGE------ 410
Query: 452 NGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTS 491
G + + V R ED + LCY+C+ +KD+ S
Sbjct: 411 -GQTQSCHRAVGRREDAWA--CIIEQLCYSCRVNMKDLPS 447
>gi|157126315|ref|XP_001654590.1| hypothetical protein AaeL_AAEL002056 [Aedes aegypti]
gi|121957296|sp|Q17JB7.1|CTU2_AEDAE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|108882562|gb|EAT46787.1| AAEL002056-PA [Aedes aegypti]
Length = 445
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 188/378 (49%), Gaps = 45/378 (11%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
++C +CN + L K+ C+ C L Y+ HKFRA+LG +K++R KV+V F+G+ +
Sbjct: 34 EICRKCNDQRAVLKLNQKEPQCRECFLHYVRHKFRASLGATKIVRRGSKVMVVFNGAPEN 93
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-FDSYF 180
+ +L +++ G++ + K++ +++ + I + ++ ++ ++ F +Y+
Sbjct: 94 VVMLDMVRHGLEQEAFKKLRVDPVVVFVGEDFIGRDQEGYEQSVREKVQILRQFGFPAYY 153
Query: 181 TCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQA 240
T L D+ + + L + ++ K+ Q + +++S+Q + R+
Sbjct: 154 TVLGAQ---DSCSIEDNC--LAGKFIGDQDKVTKVLQGIKSITSKQDFIVQTRKQTYKAI 208
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSK 300
AKKL C IF + +LA +++++SLG+G + LD+ F DDR + +RP+RD + +
Sbjct: 209 AKKLECGYIFLSSIGLELAKTLLSDVSLGRGKSLALDIAFCDDRDEERKIIRPMRDLNPE 268
Query: 301 EVIYYNIF--NDLSPVHVPSLATLADPL---ASLQKAAESFVTDLQTNFPSTVSTVFRTA 355
E+ YY F N L V + DP +SLQ FV LQ +FPSTVSTVFRT
Sbjct: 269 EIEYYLKFAENQLQSV------AIVDPYLDKSSLQNLTSKFVDGLQLSFPSTVSTVFRTG 322
Query: 356 DKL------------------------SLDLTS-MNVNNTCLLCKAPLDTRADLASSSMG 390
DKL SL L S C C + LD R S+++
Sbjct: 323 DKLGAEKIPTCDNQLEDDDHFATLFDKSLKLESNAEEPRKCKFCHSALDYRD---STTLF 379
Query: 391 ATRFSRYVSNATREQLSH 408
AT FSR VS+ QLSH
Sbjct: 380 ATEFSRMVSSRINVQLSH 397
>gi|195580185|ref|XP_002079936.1| GD21754 [Drosophila simulans]
gi|226711443|sp|B4Q9Z1.1|CTU2_DROSI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|194191945|gb|EDX05521.1| GD21754 [Drosophila simulans]
Length = 405
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 179/342 (52%), Gaps = 16/342 (4%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+ E+ L + C+ C L Y HKFRAALG +K++ +VL+ GS S+
Sbjct: 34 CSKCDVNSDELYKLNFRTAECRECFLAYARHKFRAALGAAKILPRNAEVLLVLDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ + +Y+++ + +A ++T FD F
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCNARVVYVEEQQVQGRDPVHLEALQ-NLSTQYAPFD--FYV 150
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
+E P +M+ D + ++E+ Q + +L++RQ LQ R+NL+ A+
Sbjct: 151 IELGALPSSMQRIKDYSP----SLNANNELIHKLQKLRSLTARQDYLQQQRKNLICSVAQ 206
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSKE 301
L CT +F + DLAT+++ I+LG+G LDV DDR +GD+ LRPL+D + +E
Sbjct: 207 CLRCTHVFESNISVDLATQLLTAIALGRGGSAALDVALLDDRLSGDVKLLRPLKDLNEQE 266
Query: 302 VIYYNIFNDLSPVHVPS--LATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
+ +Y L P+ ASLQ +FV +LQ N+ STVSTVFRT DK++
Sbjct: 267 IQFYIHAQRLKPLFQKGSRYGREHGQTASLQNLTSAFVANLQQNYASTVSTVFRTGDKIA 326
Query: 360 LDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
+ S ++C+ C++ LDT S ++ A +SR VS A
Sbjct: 327 AN--SNPEQSSCVHCRSTLDTE---LSDTLLAIEYSRSVSEA 363
>gi|312373568|gb|EFR21283.1| hypothetical protein AND_17290 [Anopheles darlingi]
Length = 806
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 189/376 (50%), Gaps = 34/376 (9%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
++LC +CN + L K+ C+ C L Y+ HKFRA+LG SK++R +VL+ +G+
Sbjct: 13 NELCRKCNVEEAVLKLDHKEPQCRMCFLSYVRHKFRASLGSSKIVRRGSRVLIILTGTPE 72
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYF 180
++ALL +++ G++ + K++ +++DD +S+ ER+ A + ++ F S+
Sbjct: 73 NVALLDMVRFGLEQDAFKQLRIEPVLLFVDDDFLSKTP-PERQEKLANLQDILRQF-SFP 130
Query: 181 TCLEQALEPDNMKLYTDVAELPLEQFA-KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQ 239
T + ++ +D A P E F+ ++ + ++ +++S+Q LL+ +R+
Sbjct: 131 THYTVSGSTKVVEWPSDGAFTPPETFSLEEDRLREIINGTRSVTSKQDLLEQVRKQTYQA 190
Query: 240 AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSS 299
A+ L C +F ++ DLA ++++++LG+G + DV F DDR G + +RP+RD +
Sbjct: 191 VARTLQCNYVFLSDIGIDLAKTLLSHVALGRGCSIAQDVAFCDDRNGTVKLIRPIRDLNP 250
Query: 300 KEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
E+ Y + + + AD SLQ F+ +LQ +FPSTVST++RT DKL
Sbjct: 251 DEITQYLKLAEKQHSTLDRVDHFAD-RPSLQNLTAKFIDNLQESFPSTVSTIYRTGDKLD 309
Query: 360 LDLTSMNVN---------------------------NTCLLCKAPLDTRADLASSSMGAT 392
+ N C+ C+A LD R S ++ AT
Sbjct: 310 ALKPTHNSRAEVSTEEDILGLFQKKKPAIPRGGGDPEQCVFCRAVLDYR---GSKTLYAT 366
Query: 393 RFSRYVSNATREQLSH 408
+SR VS+ SH
Sbjct: 367 EYSRLVSSRVNASCSH 382
>gi|395748215|ref|XP_003778729.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 2 [Pongo abelii]
Length = 517
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 232/519 (44%), Gaps = 89/519 (17%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ L A+L + MM +VL+A+SG
Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRXGLEVAETLANMASLSRQDMMFFLPQVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-- 175
SS +++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATG 141
Query: 176 FDSYFTCLEQ------------ALEP-DNMKLY----------------------TDVAE 200
F + LE+ A EP + + Y T E
Sbjct: 142 FPWHVVALEEVFSLPPSVLWCSAQEPVGSERAYKAAVDSFLQQQHVLGARGGPGPTQGEE 201
Query: 201 LP------------LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
P L A+ ++++F +V TL++++ LLQTLR +L+L A+ +K
Sbjct: 202 QPPQPPLDPRSLARLPAAAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSK 261
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
+ T ++ T LA K++ N++LG+GA + D GFSD+R GD++ +RP+R + KEV +YN
Sbjct: 262 VMTGDSCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRXHTLKEVAFYNRL 321
Query: 309 NDLSPVHVPSLAT--LADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DL 362
+ V P++ T A AS+ + E+F+ LQ FPSTVSTV+RT++KL
Sbjct: 322 FSVPSVFTPAVDTKWAAPEKASIHRLMEAFILRLQIQFPSTVSTVYRTSEKLVKAPRDGP 381
Query: 363 TSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKV 422
+ + + CLLC LD A +++ GA SR + S + ++
Sbjct: 382 AAGDSSPRCLLCMCALDIDAAGLATAFGAQTSSRL-----SQMQSPIPLTETRTPPGPCC 436
Query: 423 TTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYAC 482
+ V + G + R ED + ++ LCY+C
Sbjct: 437 SPGVGRAQGC--------------------------GQGACRREDPQA--CIEEQLCYSC 468
Query: 483 QYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ +KD+ S + IL + + +IRD L+
Sbjct: 469 RVNMKDLPSLDPLPPYILAEAQLRTQRAWVLQEIRDCLI 507
>gi|194761194|ref|XP_001962814.1| GF15629 [Drosophila ananassae]
gi|226711450|sp|B3MN57.1|CTU2_DROAN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|190616511|gb|EDV32035.1| GF15629 [Drosophila ananassae]
Length = 403
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 185/343 (53%), Gaps = 18/343 (5%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ ++ E+ L + C+ C L Y+ HKFRAALG +K++ +VL+ GS S+
Sbjct: 34 CSKCDISSDELFQLNFRTPECRDCFLAYVRHKFRAALGAAKVLPRDAEVLLVVDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ S +Y++D + ++ ++ A ++ + F+ Y
Sbjct: 94 VLLDMLYYAQTQNTFKRLHCSARMVYLEDQPVQGRDPADLESLEA-LSKRYEAFEFYVIT 152
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
L L ++KL D + P+ Q + +E+ + + +L+SRQ LQ R+NL+ A+
Sbjct: 153 L--GLPVGSLKLLKDYS--PVAQ--ESNELIQKLSQLRSLTSRQDYLQQQRKNLIASVAQ 206
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSKE 301
KL+C+ +F + DLAT+++ +I+LG+G LDV DDR I LRPL+D + +E
Sbjct: 207 KLHCSHVFNSSISVDLATQLLTSIALGRGGSAALDVALLDDRLAAGIKLLRPLKDLTEQE 266
Query: 302 VIYYNIFNDLSPVHVPSL---ATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
V +Y L P+ + S L D ASLQ +FV +LQ NF STVSTVFRT K+
Sbjct: 267 VQFYVHAQRLQPLLMASSRYGQELGDA-ASLQNLTSAFVANLQKNFSSTVSTVFRTGGKI 325
Query: 359 SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
S ++ C C++ LD S ++ A +SR VS A
Sbjct: 326 S--ESTHPEQAKCNHCQSALDVE---LSDTLLAIEYSRSVSEA 363
>gi|195164690|ref|XP_002023179.1| GL21098 [Drosophila persimilis]
gi|226711454|sp|B4GWY0.1|CTU2_DROPE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|194105264|gb|EDW27307.1| GL21098 [Drosophila persimilis]
Length = 405
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 175/345 (50%), Gaps = 22/345 (6%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C + E+ L + C+ C L + HKFRA+LG +K++ +VL+A GS S+
Sbjct: 34 CNKCGVVSSELYKLNFRVAECRDCFLNHARHKFRASLGAAKVLPRNAEVLLAVDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ +R+ + +YIDD S+ E A A +Y F
Sbjct: 94 VLLDMLHFAQTQNTFRRLHCNARVVYIDDQSVHG---GESMNLQALQALGTRYEPLEFYV 150
Query: 183 LE---QALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQ 239
+E A + Y+ + P + +N + + +L++RQ Q R+NLL
Sbjct: 151 VELGASACSLQRLGQYSTSLKEP-------NGLNTKLEKLRSLTARQDYHQQQRKNLLAS 203
Query: 240 AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFS 298
A+KL+C+ +F DLAT+++ +I+LG+G LDV DDR + LRPLRD +
Sbjct: 204 VAQKLSCSHVFEPSVSGDLATQLLTSIALGRGGSAALDVALLDDRLAAGVKLLRPLRDLN 263
Query: 299 SKEVIYYNIFNDLSPVH--VPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
+EV +Y L P+ S ASLQ +FV +LQ N+P+TVSTVFRT D
Sbjct: 264 EQEVRFYVHACQLKPLRESGSSYGQERGQTASLQNLTAAFVGNLQQNYPATVSTVFRTGD 323
Query: 357 KLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
K++ + + +C C++PLD + S ++ A +SR VS A
Sbjct: 324 KIAAN--AHMEQASCAQCQSPLDAK---LSDTLLAIEYSRAVSEA 363
>gi|198473330|ref|XP_001356256.2| GA10142 [Drosophila pseudoobscura pseudoobscura]
gi|226711455|sp|Q29K59.2|CTU2_DROPS RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|198139407|gb|EAL33319.2| GA10142 [Drosophila pseudoobscura pseudoobscura]
Length = 405
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 174/345 (50%), Gaps = 22/345 (6%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C + E+ L + C+ C L + HKFRA+LG +K++ +VL+A GS S+
Sbjct: 34 CNKCGVVSSELYKLNFRVAECRDCFLNHARHKFRASLGAAKVLPRNAEVLLAVDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ +R+ + +YIDD S+ E A A +Y F
Sbjct: 94 VLLDMLHFAQTQNTFRRLHCNARVVYIDDQSVHG---GESMNLQALQALGTRYEPLEFYV 150
Query: 183 LE---QALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQ 239
+E A + Y+ + P + +N + + +L++RQ Q R+NLL
Sbjct: 151 VELGASACSLQRLGQYSTSLKEP-------NGLNTKLEKLRSLTARQDYHQQQRKNLLAS 203
Query: 240 AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFS 298
A+KL+C+ +F DLA +++ +I+LG+G LDV DDR + LRPLRD +
Sbjct: 204 VAQKLSCSHVFEPSVSGDLAAQLLTSITLGRGGSAALDVALLDDRLAAGVKLLRPLRDLN 263
Query: 299 SKEVIYYNIFNDLSPVH--VPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
+EV +Y L P+ S ASLQ +FV +LQ N+P+TVSTVFRT D
Sbjct: 264 EQEVRFYVHACQLKPLRESGSSYGQERGQTASLQNLTAAFVGNLQQNYPATVSTVFRTGD 323
Query: 357 KLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
K++ + + +C C++PLD + S ++ A +SR VS A
Sbjct: 324 KIAAN--AHMEQASCAQCQSPLDAK---LSDTLLANEYSRAVSEA 363
>gi|167518011|ref|XP_001743346.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778445|gb|EDQ92060.1| predicted protein [Monosiga brevicollis MX1]
Length = 706
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 169/320 (52%), Gaps = 18/320 (5%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC V+L+ YC+ C + ++ K R+ LGK++M+R +++ +AFSG + S A
Sbjct: 38 CKRCREATPHVLLQKDLPYCRDCCIYNVHRKSRSELGKNRMIRQFERIALAFSGGNRSTA 97
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSIS--ERKANNAQ-IATAMKYFDSYF 180
LL +++ M H+++ I+IDDG + + + ER+A Q +A A+ Y + +
Sbjct: 98 LLGIIRRHMTKGEHRQLRIVPTVIHIDDGCLFGATQAEHERRAERIQSLANALDYEEVHV 157
Query: 181 TCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQA 240
LE+ D+ T A + + +F ++T+++RQ L+T++ LL A
Sbjct: 158 LRLEELYRADDEPDLTAAA----------ARVCALFADLSTVTARQDFLRTMKARLLRAA 207
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSK 300
++L+C K+ + +A +I+ + G+G ++ F D+ G + LRPLR S++
Sbjct: 208 TQQLDCHKLMVGDCHDQIAMRILVQTTQGRGGNMTRFSTFCDEVDGTAM-LRPLRAISAR 266
Query: 301 EVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-S 359
E+ YYN F L PV P++ A S + ++FV +L +FPST + ++RT++K+ +
Sbjct: 267 ELGYYNHFRRLEPVLYPTVGARAPEKTSFESLIQAFVANLTVDFPSTTAAIYRTSEKIAA 326
Query: 360 LDLTSMNVNNTCLLCKAPLD 379
+D C LC P D
Sbjct: 327 IDRPDA---PDCRLCGLPTD 343
>gi|195397670|ref|XP_002057451.1| GJ18095 [Drosophila virilis]
gi|226711444|sp|B4M8J8.1|CTU2_DROVI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|194141105|gb|EDW57524.1| GJ18095 [Drosophila virilis]
Length = 400
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 173/339 (51%), Gaps = 21/339 (6%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C N+ E+ L + C C L Y HKFRAALG +K + +VL+ GS S+
Sbjct: 34 CNKCGLNSLELYKLNFRAAECHQCFLSYARHKFRAALGAAKALPRNAEVLLLVDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ S ++ID +Q S SE +Y F
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCSARVLHID----AQSSPSENDPLPMLNELRERYAPFEFYV 149
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
++ E ++KL D + L DS NK+ +L++RQ ++ R+ L+ A
Sbjct: 150 IQLGAEVHSLKLLKDYSASRL-----DSTDNKL----RSLTARQDYVRQQRKRLIGAVAL 200
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSKE 301
+L CT +F + LA +++ +++LG+G V LDV DDR G + LRPL+D + +E
Sbjct: 201 QLQCTHVFEPSISSSLAAQLLTSVALGRGGSVALDVALLDDRLQGAVTLLRPLKDLNEQE 260
Query: 302 VIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLD 361
V +Y L P + L+D ASLQ +FV +LQ N+ STVSTVFRT DK++
Sbjct: 261 VQFYIKAQQLKPFRSDESSLLSD--ASLQNLTSAFVANLQLNYASTVSTVFRTGDKIAAK 318
Query: 362 LTSMNVN-NTCLLCKAPLDTRADLASSSMGATRFSRYVS 399
+ +TC LC++ LD+ S ++ A +SR VS
Sbjct: 319 RQPIEEGPSTCALCQSDLDSG---LSDTLLAIEYSRAVS 354
>gi|444722187|gb|ELW62885.1| Cytoplasmic tRNA 2-thiolation protein 2 [Tupaia chinensis]
Length = 536
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 161/327 (49%), Gaps = 35/327 (10%)
Query: 195 YTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAET 254
+ +AELP A+ + ++F +V TL++++ LLQTLR +L+L A+ +K+ T ++
Sbjct: 232 HQGLAELPTA--AQTQALCRLFDSVRTLTAKEELLQTLRSHLVLHVARAHGYSKVMTGDS 289
Query: 255 QTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPV 314
T LA K++ N++LG+GA + D GFSD+R GD++ +RP+ + + KEV +YN + V
Sbjct: 290 CTRLAIKLVTNLALGRGAFLAWDTGFSDERQGDVVLVRPMCNHTLKEVAFYNRLFAVPSV 349
Query: 315 HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLC 374
P+L T A AS+ + E+F+ LQT FPSTVSTV RT +KL S CLLC
Sbjct: 350 LTPALGTKAPEKASVHRLVEAFMLRLQTQFPSTVSTVCRTGEKLLKAPRSGPAGPPCLLC 409
Query: 375 KAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQD 434
LD ++++ GA F S A QL ++ + P S +
Sbjct: 410 ACTLDVDTADSATAFGAQIF----SCAPGTQLPSLLARAGEPQAPSSSPGE--------- 456
Query: 435 IPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKD 494
+G Q E R E + LCY C+ ++D+ S
Sbjct: 457 -----------------SGAQGCCREACKRDEHRA---CVVEQLCYGCRANLRDLPSLDP 496
Query: 495 IGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ IL + ++ QI+++L+
Sbjct: 497 LPPYILAEAQLRSQRAWVQQQIQEYLI 523
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Query: 62 KLCP---------RCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVL 112
+LCP +C VV+R D +C+ C + HKFRA LGK++++ P +KVL
Sbjct: 6 RLCPPTPRPQGRLQCGEGLPVVVIRAGDAFCRDCFKAFYVHKFRATLGKNRLIFPGEKVL 65
Query: 113 VAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI 169
+A+SG SS +++ + EG+ S KR+ F IY+D+G++ S +R+ AQ+
Sbjct: 66 LAWSGGPSSSSMVWQVLEGLSRDSAKRLRFVPGVIYVDEGAVCGQSHEDREKTLAQV 122
>gi|112292462|gb|AAI21806.1| C16orf84 protein [Homo sapiens]
Length = 428
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 158/320 (49%), Gaps = 53/320 (16%)
Query: 130 EGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFTCLEQAL 187
EG+ S KR+ F I++D+G+ S+ ER A++ ++ F + LE+
Sbjct: 7 EGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATGFPWHVVALEEVF 66
Query: 188 EPDNMKLYTDVAEL---------PLEQF-------------------------------- 206
L+ EL ++ F
Sbjct: 67 SLPPSVLWCSAQELVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNL 126
Query: 207 ------AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLAT 260
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K+ T ++ T LA
Sbjct: 127 ARPPAPAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSKVMTGDSCTRLAI 186
Query: 261 KIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLA 320
K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V P++
Sbjct: 187 KLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVD 246
Query: 321 TLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNTCLLCKA 376
T A AS+ + E+F+ LQT FPSTVSTV+RT++KL + + CLLC
Sbjct: 247 TKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMC 306
Query: 377 PLDTRADLASSSMGATRFSR 396
LD A ++++ GA SR
Sbjct: 307 ALDVDAADSATAFGAQTSSR 326
>gi|195031325|ref|XP_001988330.1| GH10624 [Drosophila grimshawi]
gi|226711452|sp|B4JCV8.1|CTU2_DROGR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|193904330|gb|EDW03197.1| GH10624 [Drosophila grimshawi]
Length = 397
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 178/344 (51%), Gaps = 34/344 (9%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +CN + E+ L + C+ C L Y HKFRAALG +K + +VL+ GS +S+
Sbjct: 34 CSKCNLASDELYKLNFRAAECQLCFLSYARHKFRAALGAAKALPRSAEVLLLVDGSGASL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSY--- 179
LL +L ++ KR+ + +YID N +++ K + Y
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCNARVLYID------------ACGNDSLSSLHKLHERYAPF 141
Query: 180 -FTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQ-YLLQTLRQNLL 237
F ++ EP +++ L++++ S +N Q + +L++RQ Y LQ R+ L+
Sbjct: 142 EFYVIQLNAEPKSLQ--------SLKEYSA-SIVNATQQELRSLTARQDYGLQQ-RKRLI 191
Query: 238 LQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRD 296
A L C+ +F + + LAT+++ +++LG+G V LDV DDR DI LRPL+D
Sbjct: 192 GAVAAHLQCSHVFESSISSTLATQLLTSVALGRGGSVALDVALLDDRLQDDIKLLRPLKD 251
Query: 297 FSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
+ +EV +Y L P + + ASLQ +FV +LQ N+ STVST+FRT D
Sbjct: 252 LNEQEVQFYVHAQQLQPFTSENELDQSSA-ASLQNLTSAFVANLQINYASTVSTIFRTGD 310
Query: 357 KLSL-DLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVS 399
K++ T+++ TC LC + LD + S ++ A +SR VS
Sbjct: 311 KIAAKQQTNVDPTTTCTLCHSVLDHQ---LSDTLLAIEYSRAVS 351
>gi|289739855|gb|ADD18675.1| uncharacterized conserved protein [Glossina morsitans morsitans]
Length = 439
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 173/353 (49%), Gaps = 22/353 (6%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C ++ L + C C L Y HKFRAALG +K++ KV++ F GS S+
Sbjct: 38 CYKCGSSGAIYKLTFRQAECSDCFLLYARHKFRAALGSAKILPNGAKVMLLFDGSAESVV 97
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSI-----SQVSISERKANNAQIATA-MKYFD 177
LL +L KR+ SV +Y+D+ ++ ++ +E Q+ A K F
Sbjct: 98 LLDMLHYAQSQGHFKRLRCSVIVLYVDELALIFDEAIELGGTETFLKTMQLFLASYKEFQ 157
Query: 178 SYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMF----QTVTTLSSRQYLLQTLR 233
SY + E D + +E+ ++ +D + F + L+SRQ ++ R
Sbjct: 158 SYIVPFLKN-EEDVARSICQFSEIDVKYLKRDVIGEQKFVECIDQIQNLTSRQDFVKHQR 216
Query: 234 QNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL-R 292
L+ +AAK NC F A+ T LA+ ++ I LG+G LDV D R D I L R
Sbjct: 217 SKLIARAAKHFNCQFTFKADISTILASDLLTAICLGRGITAALDVNLIDSRLNDGIKLVR 276
Query: 293 PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVF 352
PLR+ S E+ Y L + + SLQ SF+ +LQT+F STVSTV+
Sbjct: 277 PLRNLSRLEIDLYLKARSLKSLQCHYYGD-KETNGSLQNLTRSFIDNLQTSFSSTVSTVY 335
Query: 353 RTADK------LSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVS 399
RT DK LS ++ +M V NTC C + L+++ + S+++ A FSR VS
Sbjct: 336 RTGDKIATEDGLSSNVENMGV-NTCSFCCSILNSKYN--SATLLAVEFSRLVS 385
>gi|195119029|ref|XP_002004034.1| GI19780 [Drosophila mojavensis]
gi|226711453|sp|B4KIW3.1|CTU2_DROMO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|193914609|gb|EDW13476.1| GI19780 [Drosophila mojavensis]
Length = 404
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 176/347 (50%), Gaps = 23/347 (6%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C ++ ++ L + C C L+Y+ HKFRAALG +K++ ++L+ GS S+
Sbjct: 34 CSKCGQSSQQLYKLNFRSAECSECFLKYVRHKFRAALGAAKVLPRNAEILLVIDGSSESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSY-FT 181
LL ++ ++ KR+ + +Y+D I E ++ + + ++ + F
Sbjct: 94 VLLDMVHFAQTQNTFKRLHCNARVLYVDAHC---SPIKEEESPLLALNELQRRYEPFEFY 150
Query: 182 CLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAA 241
++ +P +++L D +++ + + +SRQ +Q R+ L+ A
Sbjct: 151 VIQLNGDPQSLQLLKDYTV---------RQLDSILDQFNSSTSRQDYMQQKRKFLVGGVA 201
Query: 242 KKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSK 300
KL C+ +F LAT+++ +++LG+GA V LDV DDR GD+ LRPL+D + +
Sbjct: 202 MKLKCSHVFEPSISPSLATQLLTSVALGRGASVALDVALLDDRLMGDVKLLRPLKDLNDQ 261
Query: 301 EVIYYNIFNDLSPVHV--PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
EV +Y +L V PS L+ SLQ FV +LQ N+ STVSTVFRT DK+
Sbjct: 262 EVQFYVHAKELKAFRVDDPSHYPLSG--GSLQSLTRDFVANLQLNYASTVSTVFRTGDKI 319
Query: 359 SLDLTSMNV-NNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATRE 404
+ S + + C LC++ LD S ++ A +SR VS E
Sbjct: 320 APKRNSKEIMASYCALCQSLLDNN---ISDTLLAIEYSRAVSEVGVE 363
>gi|402909290|ref|XP_003917355.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 3 [Papio
anubis]
Length = 428
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 210/448 (46%), Gaps = 92/448 (20%)
Query: 130 EGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI-----ATAMKYFDSYFTCLE 184
EG+ S KR+ F I++D+G+ S+ ER A++ AT + + + LE
Sbjct: 7 EGLSQDSAKRLRFVPGVIFVDEGAAFGKSLEERSKTLAEVKPILQATGLPW---HVVALE 63
Query: 185 Q--ALEPDNMKL-----------YTDVAELPLEQ-------------------------- 205
+ +L P ++ Y + L+Q
Sbjct: 64 EVFSLPPSVLRCSAQEPAGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGKELSPQPRLDP 123
Query: 206 --------FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K+ T ++ T
Sbjct: 124 QSLASPPAAAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSKVMTGDSCTR 183
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVP 317
LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V P
Sbjct: 184 LAIKLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPSVFTP 243
Query: 318 SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNTCLL 373
++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL + + + CLL
Sbjct: 244 AVDTKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKAPRDGPAAGDSSPCCLL 303
Query: 374 CKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQ 433
C LD A ++++ GA SR LS + +SP T + +T
Sbjct: 304 CMCALDVDAADSATAFGAQTSSR---------LSQM----QSP-------TPLTET---- 339
Query: 434 DIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDK 493
++ GS P V +Q + R ED + ++ LCY+C+ +KD+ S
Sbjct: 340 ----RTPPGSCCSPG--VGRVQGC-GQGACRREDPQA--CIEEQLCYSCRVNMKDLPSLD 390
Query: 494 DIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ IL + + +IRD L+
Sbjct: 391 PLPPYILAEAQLRTQRAWVLQEIRDCLI 418
>gi|344237974|gb|EGV94077.1| Cytoplasmic tRNA 2-thiolation protein 2 [Cricetulus griseus]
Length = 448
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 205/450 (45%), Gaps = 93/450 (20%)
Query: 127 LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK--YFDSYFTCLE 184
L +G+ S KR+ F IY+D+G+ S+ +R+ A++ ++ F + LE
Sbjct: 2 FLFQGLSQGSAKRLRFVPGVIYVDEGAACGQSLKDREKTLAEVKLILQNTGFPWHVVALE 61
Query: 185 QAL------------EPDNMKLYTDVAE---------LPLEQFAKDSE------------ 211
+ EP + +A L +E +A ++
Sbjct: 62 EVFSLPPSVLCCASQEPAGTEEAYKMAVDSFLQQQHVLGVEGYASPAQGEDQPHPSHSQE 121
Query: 212 ---------------INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQT 256
++++F ++ TL++++ LLQTLR +L++ A+ K+ T E+ T
Sbjct: 122 PLGMAGSPIAAQTEALSRLFSSIRTLTAKEELLQTLRTHLIVHVARTHGYGKVMTGESCT 181
Query: 257 DLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV 316
LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD++ KEV +YN + V
Sbjct: 182 RLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVLVRPMRDYTLKEVAFYNHLFGVPSVFT 241
Query: 317 PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL---SLDLTSMNVNN-TCL 372
P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL D + + CL
Sbjct: 242 PAIDTKAPEKASIHRLMEAFILRLQTLFPSTVSTVYRTSEKLVKAPRDSCATGPSGPNCL 301
Query: 373 LCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGS 432
LC LD ++++ GA + SH+ S
Sbjct: 302 LCMCTLDIDTADSATAFGA------------QSSSHL----------------------S 327
Query: 433 QDIPEKSVNGSEDIPN-QIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTS 491
Q +P ++ G PN G + + V R ED + + LCY C+ +KD+ S
Sbjct: 328 QMLPAEA--GMPTPPNCGAGEGQAQSCHRGVGRREDVQA--CIMEQLCYGCRVNMKDLPS 383
Query: 492 DKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ +L + + +I+++L+
Sbjct: 384 LDPLPPYVLAEAQLRSQRAWVSREIQEYLI 413
>gi|195436640|ref|XP_002066265.1| GK18201 [Drosophila willistoni]
gi|226711445|sp|B4MYR2.1|CTU2_DROWI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|194162350|gb|EDW77251.1| GK18201 [Drosophila willistoni]
Length = 403
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 181/349 (51%), Gaps = 31/349 (8%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C ++ ++ + + C+ C L Y HKFRAALG +K + VL+ GS S+
Sbjct: 34 CQKCGQHSDDLFKVNFRSEECRDCFLNYARHKFRAALGAAKALPRDSDVLLLLDGSIESI 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ +Y+D+ + ++ + I K D Y
Sbjct: 94 VLLDMLHYAQTQNTFKRLHCQAKVLYLDESVV-------QEQQSLDIDRLQKLQDRY--- 143
Query: 183 LEQALEPDNMKLYTDVAEL-PLEQFA-----KDSEINKMFQTVTTLSSRQYLLQTLRQNL 236
+ ++L TD++ L PL+ + ++S++ + TLS+RQ LQ R+
Sbjct: 144 --TPFDLFVIELGTDLSNLRPLKNYTPKTSREESDLKIKLDKLRTLSARQDYLQQQRKRF 201
Query: 237 LLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG-DIITLRPLR 295
L A +LNCT +F DLAT+ + +I+LG+G LDV DDR DI LRPL+
Sbjct: 202 LASVAHQLNCTHVFVPSISKDLATQFLTSIALGRGGSAALDVALCDDRLDHDIKLLRPLK 261
Query: 296 DFSSKEVIYYNIFNDLSPVHV-PSLATLAD---PLASLQKAAESFVTDLQTNFPSTVSTV 351
D + +EV Y +L + + PSLAT ASLQ +FV +LQ N+ +TVSTV
Sbjct: 262 DLNEQEVQLYVRARNLEDLKLGPSLATYGQEKGETASLQNLTAAFVRNLQENYAATVSTV 321
Query: 352 FRTADKLSLDLTSMNVN-NTCLLCKAPLDTRADLASSSMGATRFSRYVS 399
FRT +K++ + +V+ + C C++PLD+ L S ++ A +SR VS
Sbjct: 322 FRTGNKIA---PNRHVDQDMCQQCQSPLDS---LLSDTLLAIEYSRVVS 364
>gi|426383216|ref|XP_004058183.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 3
[Gorilla gorilla gorilla]
Length = 428
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 160/320 (50%), Gaps = 53/320 (16%)
Query: 130 EGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFTCLEQ-- 185
EG+ S KR+ F I++D+G+ S+ ER A++ ++ F + LE+
Sbjct: 7 EGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATGFPWHVVALEEVF 66
Query: 186 ----------ALEP-DNMKLYTDVAELPLEQ----------------------------- 205
A EP + Y + L+Q
Sbjct: 67 SLPPSVLWCSAQEPVGSEGAYKAAVDSFLQQQHVLGAGGGPGPTQGEEQPPQPPLDPQNL 126
Query: 206 -----FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLAT 260
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K+ T ++ T LA
Sbjct: 127 ARPPAAAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSKVMTGDSCTRLAI 186
Query: 261 KIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLA 320
K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V P++
Sbjct: 187 KLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVD 246
Query: 321 TLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNTCLLCKA 376
T A AS+ + E+F+ LQ FPSTVSTV+RT++KL + + + CLLC
Sbjct: 247 TKAPEKASIHRLMEAFILRLQAQFPSTVSTVYRTSEKLVKGPRDGPAAGDSSPRCLLCMC 306
Query: 377 PLDTRADLASSSMGATRFSR 396
LD A ++++ GA SR
Sbjct: 307 ALDVDAADSATAFGAQTSSR 326
>gi|397468262|ref|XP_003805812.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 2 [Pan
paniscus]
Length = 428
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 158/315 (50%), Gaps = 53/315 (16%)
Query: 130 EGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFTCLEQ-- 185
EG+ S KR+ F I++D+G+ S+ ER A++ ++ F + LE+
Sbjct: 7 EGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATGFPWHVVALEEVF 66
Query: 186 ----------ALEP-DNMKLYTDVAELPLEQ----------------------------- 205
A EP + Y + L+Q
Sbjct: 67 SLPPSVLWCSAQEPVGSEGAYKAAVDSFLQQQHVLGAGSGPGPTQGEEQPPQPPLDPQNL 126
Query: 206 -----FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLAT 260
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K+ T ++ T LA
Sbjct: 127 ARPPAPAQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSKVMTGDSCTRLAI 186
Query: 261 KIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLA 320
K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V P++
Sbjct: 187 KLMTNLALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVD 246
Query: 321 TLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNTCLLCKA 376
T A AS+ + E+F+ LQT FPSTVSTV+RT++KL + + CLLC
Sbjct: 247 TKAPEKASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMC 306
Query: 377 PLDTRADLASSSMGA 391
LD A ++++ GA
Sbjct: 307 ALDVDAADSATAFGA 321
>gi|225735586|ref|NP_722470.2| cytoplasmic tRNA 2-thiolation protein 2 [Mus musculus]
gi|123784159|sp|Q3U308.1|CTU2_MOUSE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|74196130|dbj|BAE32982.1| unnamed protein product [Mus musculus]
Length = 514
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 169/342 (49%), Gaps = 43/342 (12%)
Query: 184 EQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKK 243
E L P + + + A P A+ ++++F ++ TL++++ LLQTLR +L++ A+
Sbjct: 205 EARLHPSHGREPSGTAGYPTA--AQTEALSRLFSSIKTLTAKEELLQTLRTHLIVHIARV 262
Query: 244 LNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVI 303
K+ T ET T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV
Sbjct: 263 HGYCKVMTGETCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVLVRPMRDHTLKEVA 322
Query: 304 YYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL----S 359
+YN + V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL
Sbjct: 323 FYNHLFRVPSVFTPAIDTKAPEKASIHRLMEAFILRLQTLFPSTVSTVYRTSEKLVKAPR 382
Query: 360 LDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHA 419
+ +CLLC LD ++++ GA + SH+ S+ P
Sbjct: 383 EGCAAGPSGPSCLLCMCALDIDTADSATAFGA------------QSSSHL---SQMPSAE 427
Query: 420 SKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLC 479
+ + T G G + + +V + D + LC
Sbjct: 428 AGMPTQPCCAAG--------------------EGQAQSCHREVGKRGDARA--CITEQLC 465
Query: 480 YACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
Y+C+ +KD+ S + +L + + ++I+++L+
Sbjct: 466 YSCRVNMKDLPSLDPLPPYVLAEAQLRSQRGSVSEEIQEYLI 507
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
++ C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+++SG S
Sbjct: 25 EQKCVKCAEGLPVVVIRAGDAFCRVCFKAFYVHKFRAMLGKNRVIFPGEKVLLSWSGGPS 84
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI 169
S +++ + EG+ S KR+ F IY+D+G+ S+ +R+ A++
Sbjct: 85 SSSMVWQVLEGLSQDSAKRLRFVPGVIYVDEGAACGQSLEDRQKTVAEV 133
>gi|426242288|ref|XP_004015006.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Ovis aries]
Length = 492
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 217/505 (42%), Gaps = 93/505 (18%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
D+ C +C VV+R D +C+ C HKFRA LGK++++ P +KVL+A+SG S
Sbjct: 25 DQKCVKCKEGLPVVVIRAGDAFCRDCFKALYVHKFRAMLGKNRLIFPGEKVLLAWSGGPS 84
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDS 178
S +++ + EG+ S KR+ F IY+D+G+ S +R A++ ++ F
Sbjct: 85 SSSMVWQVLEGLSRDSAKRLRFVPGVIYVDEGATCGQSPEDRAKTLAEVKLVLQTTGFPW 144
Query: 179 YFTCLEQ--ALEPDNMKLY--------------------------TDVAELPLEQFAKDS 210
+ LE+ +L P ++ + D E + A+D
Sbjct: 145 HIVALEEVFSLPPSVLRYFAQEPVGTESAYKAAVDSFLQQQHALGADGVERQSQHCAQDP 204
Query: 211 E-------------INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
++++F +V TL++++ LLQTLR +L+L A+ +K+ ++
Sbjct: 205 HSPAGPPTTAQTQALSRLFDSVKTLTAKEELLQTLRTHLILHVARNHGYSKVVAGDSCPR 264
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVP 317
LA K++ +++LG+GA + D G P R + + N + V P
Sbjct: 265 LAIKLMTSLALGRGAFLAWDTVRLQAAQGP-----PRR----RGELGANRRFAVPSVCTP 315
Query: 318 SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNNTCLLCKA 376
+L T A AS+ + E+F+ LQ FPSTVSTV+RT++KL CLLC
Sbjct: 316 ALDTKAPEKASIHRLMEAFILRLQAQFPSTVSTVYRTSEKLVKAPRDGCVAGPRCLLCMC 375
Query: 377 PLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIP 436
LD ++++ GA Q SH+ Q P
Sbjct: 376 TLDVDTADSATAFGA-------------QTSHL----------------------PQMQP 400
Query: 437 EKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIG 496
+ G P GM P+ R ED + LCY C+ +KD+ S + +
Sbjct: 401 PVTQAGVAAGPC-CCAGMGGGPS--CYRGEDPRA--QVMEQLCYGCRVNMKDLPSLELLP 455
Query: 497 EGILKKCLQEKSLNEMEDQIRDFLL 521
IL + E +++++LL
Sbjct: 456 PYILSEAQIRSQRATAEQEVQEYLL 480
>gi|23273656|gb|AAH36332.1| RIKEN cDNA 2310061F22 gene [Mus musculus]
Length = 427
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 169/342 (49%), Gaps = 43/342 (12%)
Query: 184 EQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKK 243
E L P + + + A P A+ ++++F ++ TL++++ LLQTLR +L++ A+
Sbjct: 118 EARLHPSHGREPSGTAGYPTA--AQTEALSRLFSSIKTLTAKEELLQTLRTHLIVHIARV 175
Query: 244 LNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVI 303
K+ T ET T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV
Sbjct: 176 HGYCKVMTGETCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVLVRPMRDHTLKEVA 235
Query: 304 YYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL----S 359
+YN + V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL
Sbjct: 236 FYNHLFRVPSVFTPAIDTKAPEKASIHRLMEAFILRLQTLFPSTVSTVYRTSEKLVKAPR 295
Query: 360 LDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHA 419
+ +CLLC LD ++++ GA + SH+ S+ P
Sbjct: 296 EGCAAGPSGPSCLLCMCALDIDTADSATAFGA------------QSSSHL---SQMPSAE 340
Query: 420 SKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLC 479
+ + T G G + + +V + D + LC
Sbjct: 341 AGMPTQPCCAAG--------------------EGQAQSCHREVGKRGDARA--CITEQLC 378
Query: 480 YACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
Y+C+ +KD+ S + +L + + ++I+++L+
Sbjct: 379 YSCRVNMKDLPSLDPLPPYVLAEAQLRSQRGSVSEEIQEYLI 420
>gi|397468264|ref|XP_003805813.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 isoform 3 [Pan
paniscus]
Length = 525
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 207 AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
A+ ++++F +V TL++++ LLQTLR +L+L A+ +K+ T ++ T LA K++ N+
Sbjct: 230 AQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNL 289
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
+LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V P++ T A
Sbjct: 290 ALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEK 349
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNTCLLCKAPLDTRA 382
AS+ + E+F+ LQT FPSTVSTV+RT++KL + + CLLC LD A
Sbjct: 350 ASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDA 409
Query: 383 DLASSSMGA 391
++++ GA
Sbjct: 410 ADSATAFGA 418
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 99 LGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVS 158
LGK++++ P +KVL+A+SG SS +++ + EG+ S KR+ F I++D+ + ++
Sbjct: 2 LGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDERTPGVLT 61
Query: 159 ISERKANNAQIATAMKY 175
++ R A + K+
Sbjct: 62 VALRSATREKPLPKGKW 78
>gi|328766944|gb|EGF76996.1| hypothetical protein BATDEDRAFT_92160 [Batrachochytrium
dendrobatidis JAM81]
Length = 467
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 221/497 (44%), Gaps = 93/497 (18%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQ-DKVLVAFSGSHSS 121
+C +C ++++ + +C++C L + H+FR L KS + P+ K++VAFSG SS
Sbjct: 18 MCNKCKVETPSIIVKRAE-FCRSCFLDSVGHRFRGNLSKSSI--PEGSKLMVAFSGGPSS 74
Query: 122 MALLHLLQEGMQL----SSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFD 177
ALL + + ++ S KR C Y+D Q SI + A++A TA+ +
Sbjct: 75 RALLQTMNDYCRVDPENSRKKRKFPEFCVCYVD-----QSSILDSHASDASKITAI--VN 127
Query: 178 SY-----FTCLEQALE---PDNMKLYTDVAE---------LPLEQFAK--DSE--INKMF 216
SY LE E P +K + V + + LE+ AK DS + +MF
Sbjct: 128 SYQRELFIVSLEAVFEEHAPALLKTHIGVDDTISASSSFNIELEKNAKKVDSRLLVQQMF 187
Query: 217 QTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPL 276
T+++++S++ LL L + L++ AK C I +T T +A +I+N G+G +P
Sbjct: 188 GTLSSMTSKEDLLHYLTLHTLVREAKAQGCAGILLGDTATSVAINVISNTCKGRGLSLPA 247
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESF 336
D+ + D+ LRP+RD SKE+ +N + L V SL T P AS+ + ++ F
Sbjct: 248 DI-MDSEWYQDVHILRPMRDILSKEIGIFNRLSKLETVAHSSLTTFMAPKASISRLSQDF 306
Query: 337 VTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSR 396
+ L+ FP+TVSTV RTA K+ + S C LC+ P+D+ + AS
Sbjct: 307 IVGLEKEFPATVSTVARTAFKIQTNHLS---KKQCPLCEGPVDSTDNFAS---------- 353
Query: 397 YVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQY 456
+ S+E+P + K + + S+D
Sbjct: 354 ------------IDSSAETPGYPCKPICETKPSFEC---------CSDDKTTTACCAQNV 392
Query: 457 TPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDK------------DIGEGILKKCL 504
NE+V N+ LCYAC+ + D K + I
Sbjct: 393 NKNEQV----------NVYPLLCYACRNIAHDFPKQKTTQSPSPNQHDVPLPAYIAHNSF 442
Query: 505 QEKSLNEMEDQIRDFLL 521
+ S NE+ +QI DFL+
Sbjct: 443 RRLSQNELRNQISDFLI 459
>gi|432104873|gb|ELK31385.1| Cytoplasmic tRNA 2-thiolation protein 2 [Myotis davidii]
Length = 517
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 117/189 (61%), Gaps = 4/189 (2%)
Query: 207 AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
A+ ++++F +V TL+++Q LLQTLR +L+L A+ +K+ T ++ T LA K++ ++
Sbjct: 222 AQTEALSRLFDSVKTLTAKQELLQTLRTHLILHVARTHGYSKVMTGDSCTRLAIKLMTSL 281
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
+LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V P++ T A
Sbjct: 282 ALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFAVPSVFTPAIDTKAPEK 341
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNT----CLLCKAPLDTRA 382
+S+ + E+F+ LQ FPSTVSTV+RT++KL N CLLC LD
Sbjct: 342 SSIHRLMEAFMLRLQAQFPSTVSTVYRTSEKLVKAPRDGNAGGPPDPRCLLCMCALDIDT 401
Query: 383 DLASSSMGA 391
++++ GA
Sbjct: 402 ADSATAFGA 410
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 86 CLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVC 145
C + HKFRA LGK++++ P +KVL+A+SG SS +++ + EG+ S KR+ F
Sbjct: 9 CFKAFYVHKFRAVLGKNRLIFPGEKVLLAWSGGPSSSSMIWQVLEGLSRDSAKRLRFVPG 68
Query: 146 AIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFTCLEQ 185
+Y+D+G+ S +R A++ ++ F + LE+
Sbjct: 69 VVYVDEGAACGQSPEDRAKTLAEMKLILQTVGFPWHIVALEE 110
>gi|281339938|gb|EFB15522.1| hypothetical protein PANDA_001215 [Ailuropoda melanoleuca]
Length = 544
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 113/181 (62%), Gaps = 1/181 (0%)
Query: 212 INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKG 271
++++F +V TL++++ LLQTLR +L+L A+ +K+ T ++ T LA K++ +++LG+G
Sbjct: 259 LSRLFDSVKTLTAKEELLQTLRTHLILHVARTHGYSKVMTGDSCTRLAIKLMTSLALGRG 318
Query: 272 AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK 331
A + D GFSD+R GD++ +RP+R+ + KEV +YN + V P++ T A AS+ +
Sbjct: 319 AFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFAVPSVFTPAIDTKAPEKASIHR 378
Query: 332 AAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNNTCLLCKAPLDTRADLASSSMG 390
E F+ LQ FPSTVSTV+RT++KL CLLC LD ++++ G
Sbjct: 379 LMEGFLLRLQAQFPSTVSTVYRTSEKLVKAPRDGCAAGPRCLLCMCLLDVDTADSATAFG 438
Query: 391 A 391
A
Sbjct: 439 A 439
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
C+ C + HKFRA LGK++++ P +KVL+A+SG SS +++ + EG+ S KR+ F
Sbjct: 1 CRDCFRAFYIHKFRAVLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLGRDSAKRLRF 60
Query: 143 SVCAIYIDDGSISQVSISE 161
+Y+D SQV +
Sbjct: 61 VPGVVYVDG---SQVGLGH 76
>gi|339257736|ref|XP_003369054.1| zinc metalloproteinase nas-4 [Trichinella spiralis]
gi|316966770|gb|EFV51311.1| zinc metalloproteinase nas-4 [Trichinella spiralis]
Length = 1078
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 156/311 (50%), Gaps = 33/311 (10%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
+LC +C TN G+V+L KD++C+ C +Y HKFR +LG+ ++ R + L+ GS SS
Sbjct: 410 RLCVKC-TNLGDVILHEKDVFCRRCFKRYCLHKFRLSLGRYRLFRNNETALIYLDGSASS 468
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFT 181
+ L ++ + KR+L ++I + +Q + F
Sbjct: 469 VFLFRIVTGLVARMDPKRMLLRPIFVHIIESGNNQSGYKD------------------FE 510
Query: 182 CLEQALEPDNMKLY---------TDVAELPLEQFAKDSE--INKMFQTVTTLSSRQYLLQ 230
L + +N KL+ +EL Q +K+ + I+ +FQ T+ + + LLQ
Sbjct: 511 ALIDLVHSNNFKLHLFSLADIYQKSFSELSHCQQSKEDQEKIDILFQHCTSATVKLELLQ 570
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT 290
L+ LL + A+ + + T L+ ++++NI+ G+G +P DV D R +
Sbjct: 571 RLKTMLLYKIARHYETCFVMLSSNSTLLSGRVLSNIAQGRGDQIPDDVAVIDKRWPGVQF 630
Query: 291 LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL---ASLQKAAESFVTDLQTNFPST 347
LRPL + S E+ +YN F + + PS+ TL + L S+Q+ ++ F+ +LQ+ F ST
Sbjct: 631 LRPLCELSEPEICFYNYFFNNGCISFPSVMTLTNHLLEEESIQRESKLFIHELQSKFTST 690
Query: 348 VSTVFRTADKL 358
VSTVF + KL
Sbjct: 691 VSTVFSSVSKL 701
>gi|194208895|ref|XP_001488200.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Equus caballus]
Length = 520
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 116/189 (61%), Gaps = 4/189 (2%)
Query: 207 AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
A+ ++++F +V TL++++ LLQ LR +L+L A+ +K+ T ++ T LA K++ ++
Sbjct: 226 AQTEALSRLFDSVKTLTAKEELLQALRTHLILHVARTHGYSKVMTGDSCTRLAIKLMTSL 285
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
+LG+GA + D GFSD+R GD++ +RP+R+ + KEV +YN + V P+L T A
Sbjct: 286 ALGRGAFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNHLFAVPSVFTPALDTKAPEK 345
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL----DLTSMNVNNTCLLCKAPLDTRA 382
AS+ + E+F+ LQ FPSTVSTV+RT++KL + CLLC LD
Sbjct: 346 ASIHRLMEAFMLRLQDQFPSTVSTVYRTSEKLVKAPRDGCAAGPPGPRCLLCMCALDIDT 405
Query: 383 DLASSSMGA 391
++++ GA
Sbjct: 406 ADSATAFGA 414
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
++ C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG S
Sbjct: 24 EQKCVKCKEGLPVVVIRAGDAFCRDCFKAFYIHKFRAVLGKNRLIFPGEKVLLAWSGGPS 83
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDS 178
S +++ + EG+ S KR+ F + ID+G+ +S R A++ ++ F
Sbjct: 84 SSSMVWQVLEGLSRESAKRLRFVPGIVCIDEGAACGLSPEARAKALAEMKLILQTVGFPW 143
Query: 179 YFTCLEQA--LEPDNMKLYT 196
+ LE+ L P ++ +
Sbjct: 144 HVVALEEVFDLPPSVLRCFA 163
>gi|344292782|ref|XP_003418104.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Loxodonta
africana]
Length = 523
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 99/145 (68%)
Query: 214 KMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAH 273
++F +V TL++++ LLQTLR +L+L A+ +K+ ++ T LA K++ N++LG+GA
Sbjct: 236 RLFNSVQTLTTKEELLQTLRTHLILHVARTHGYSKVMMGDSCTRLAIKLLTNLALGRGAF 295
Query: 274 VPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAA 333
+ D GF+D+R GD++ +RP+R+ + KEV +YN + V P++ T A AS+ +
Sbjct: 296 LAWDTGFADERHGDVVVVRPMREHTLKEVAFYNRLFAIPTVFTPAIHTKAPEKASIHRLM 355
Query: 334 ESFVTDLQTNFPSTVSTVFRTADKL 358
E+FV LQ FPSTVSTV+RT++KL
Sbjct: 356 EAFVLRLQAQFPSTVSTVYRTSEKL 380
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K C +C +V+R D +C+ C Y HKFRA LGK++++ P +KVL+A+SG SS
Sbjct: 31 KWCVKCKKGVPVLVIRAGDAFCRDCFKAYYVHKFRAVLGKNRLIFPGEKVLLAWSGGPSS 90
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI-----ATAMKYF 176
++L + EG+ S K++ F +Y+D+G+ S+ +R A++ +T++ +
Sbjct: 91 SSMLRQVLEGLSRESAKQLRFVPGVVYVDEGAACGRSLEDRAETLAEVRSILHSTSLPWH 150
Query: 177 D 177
D
Sbjct: 151 D 151
>gi|270012676|gb|EFA09124.1| hypothetical protein TcasGA2_TC015985 [Tribolium castaneum]
Length = 329
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 149/332 (44%), Gaps = 60/332 (18%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VVLR KD YC+ C L HKF+A LGK K++RP D+VLV H S A
Sbjct: 30 CNKCKEEIPIVVLRSKDKYCRKCFLAGATHKFKATLGKHKLIRPNDRVLVIHKCGHPSTA 89
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER----KANNAQIATAMKYFDSY 179
LLH ++ G+ L +HK++ F ++I++ + +++++R KA ++A F Y
Sbjct: 90 LLHFIRSGLDLETHKKLRFEPVVLFIEE--FTHLTVTDRSEILKAIEKEVACFN--FQVY 145
Query: 180 FTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQ 239
T L + + T+ E L E+++ + V T Q L +T + + L
Sbjct: 146 LTSLAKLIT-------TNSVETELHANFDRLEMDEDDKNVITKFVDQQLNETNKNDFL-- 196
Query: 240 AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSS 299
NI+ R + LRPLR F
Sbjct: 197 -------------------------NIT----------------RDETVKILRPLRLFDL 215
Query: 300 KEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
KE+ +YN N L PV +P S+Q+ + FV +LQ N+P+TV+T+ +T DKLS
Sbjct: 216 KELAFYNHLNSLEPVTYRKRD--ENPYKSVQQLMKKFVNELQVNYPATVTTILKTGDKLS 273
Query: 360 LDLTSMNVNNTCLLCKAPLDTRADLASSSMGA 391
L N + C + K + R S+ G
Sbjct: 274 LGTKPTNKCDFCNVGKKQIGDRIFENSTISGG 305
>gi|391334106|ref|XP_003741449.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like
[Metaseiulus occidentalis]
Length = 326
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 51/308 (16%)
Query: 73 EVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGM 132
E VLR + YC+ C L+ +HKFR+ +GK+K+M+P D+VLV + S + A+ HLL+
Sbjct: 32 EFVLRKVNGYCRPCYLEACHHKFRSTVGKTKLMKPGDRVLVWQNSSLGAAAMRHLLE--- 88
Query: 133 QLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNM 192
+L K N + ++ F+ F +E E ++
Sbjct: 89 -------VL--------------------EKENETALKKKLQ-FEFKFALVEGYDE--HL 118
Query: 193 KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTA 252
KL +PL A Q +TL + + + Q +++ A+K N +K+FT
Sbjct: 119 KLDEKSLRIPLIPPAAP-------QRNSTL--KLFNESLVSQKAVIEFARKHNFSKVFTC 169
Query: 253 ETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLS 312
+T +DLA ++ +ISLG+G +P G S +R G ++ LRPLR+F+ +E+ Y L
Sbjct: 170 DTGSDLAHIMLTSISLGRGGQLPDWTGVSLERDG-VVLLRPLREFTEEELDRY---LKLY 225
Query: 313 PVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTS-MNVNNTC 371
+ VP T +S+Q+ ++ FV LQ +FPSTV T++RTADK++ D S ++V + C
Sbjct: 226 SIEVP---TQKRSPSSIQRLSQDFVDGLQADFPSTVPTIWRTADKIAADSKSPLSVCDHC 282
Query: 372 LLCKAPLD 379
C P D
Sbjct: 283 -GCFNPTD 289
>gi|440801766|gb|ELR22771.1| hypothetical protein ACA1_149390 [Acanthamoeba castellanii str.
Neff]
Length = 546
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 158/329 (48%), Gaps = 40/329 (12%)
Query: 62 KLCPRCNTNNGEVVLRLKDIY-CKACLLQYLNHKFRAALGKS-KMMRPQDKVLVAFSGSH 119
+ C +CNT V ++ Y C AC + +F+ K K R ++L+AFSG
Sbjct: 67 RTCQKCNT--APSVFNWRNEYICWACFRNLFDKRFKTNFVKGRKNKREHVRLLLAFSGGP 124
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSY 179
SS ALLH + + + + L+ V ++ID I+ + ++R ++ + +SY
Sbjct: 125 SSRALLHGVAQ-CTMGRGTKALYDVHVLHIDQSRITGIPDADRVEQQEEM---KRVVESY 180
Query: 180 FTCLEQALEPDNMKLYTDVAELP-----------LEQFAKDS--EINKMFQTVTTLSSRQ 226
L D + L V LP E+ +DS ++ ++F TTL+SR+
Sbjct: 181 ------GLRLDILPLEA-VTSLPGVVPEGAVKEKEEKEEEDSGLQLQRLFDRTTTLTSRE 233
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
LL LR +LL A + + + ++ T +A +IA+ G+ +P + F D R
Sbjct: 234 DLLAYLRTHLLASVAAQREASWVCVGDSATRIAVDMIADTCKGRAFGLPDRLSFIDTRYP 293
Query: 287 DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAE------------ 334
++ +RP+++F ++EV YN F LS V +P L T +AS+ AE
Sbjct: 294 GLLWVRPMKEFLAQEVALYNHFAQLSAVFIPQLDTKTSKMASINHLAEAHWGEWARAGIL 353
Query: 335 SFVTDLQTNFPSTVSTVFRTADKLSLDLT 363
+F+ LQ +FP T+ T+ R+ DKLSL T
Sbjct: 354 AFLAGLQADFPHTIHTLLRSGDKLSLPAT 382
>gi|26355583|dbj|BAC41181.1| unnamed protein product [Mus musculus]
Length = 246
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 41/276 (14%)
Query: 250 FTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFN 309
T ET T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN
Sbjct: 1 MTGETCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVLVRPMRDHTLKEVAFYNHLF 60
Query: 310 DLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL----SLDLTSM 365
+ V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL +
Sbjct: 61 RVPSVFTPAIDTKAPEKASIHRLMEAFILRLQTLFPSTVSTVYRTSEKLVKAPREGCAAG 120
Query: 366 NVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTD 425
+CLLC LD ++++ GA + SH+ S+ P + + T
Sbjct: 121 PSGPSCLLCMCALDIDTADSATAFGA------------QSSSHL---SQMPSAEAGMPTQ 165
Query: 426 VNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYV 485
G G + + +V + D + LCY+C+
Sbjct: 166 PCCAAG--------------------EGQAQSCHREVGKRGDARA--CITEQLCYSCRVN 203
Query: 486 VKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+KD+ S + +L + + ++I+++L+
Sbjct: 204 MKDLPSLDPLPPYVLAEAQLRSQRGSVSEEIQEYLI 239
>gi|449662138|ref|XP_002160559.2| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 A-like, partial
[Hydra magnipapillata]
Length = 175
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Query: 252 AETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDL 311
+T +DL+ ++ NI G G +P ++G +D R DI+ +RPLR+FSSKEV Y N L
Sbjct: 3 GDTASDLSITLLCNILQGNGNAIPFEIGVADKRYSDIVIIRPLREFSSKEVALYTRLNHL 62
Query: 312 SPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTC 371
S VP++ T + +Q+ E FV LQ FPSTV+T+FRT DKL LD + C
Sbjct: 63 SFTVVPNILTKKATNSCIQRQTEQFVNSLQAGFPSTVNTIFRTGDKLCLD--QEFTFSPC 120
Query: 372 LLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVI 410
LLC+ P D +L + T + N EQ V+
Sbjct: 121 LLCQRPKDRIEELETGEKIETEVEQDKRNDVIEQRHKVM 159
>gi|449686073|ref|XP_004211062.1| PREDICTED: uncharacterized protein LOC101240069 [Hydra
magnipapillata]
Length = 534
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 112/231 (48%), Gaps = 32/231 (13%)
Query: 210 SEINK-----MFQTVTTLSSRQYLLQTLRQNLLL----------QAAKKLNCTK------ 248
+EINK F ++TL+++ + L +R N L+ Q ++ N K
Sbjct: 272 NEINKSSFSQAFAQLSTLTAKVHFLSIVRYNPLIFMKIISGRYSQTNERENDGKNPRNNH 331
Query: 249 ---------IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSS 299
+ +T +DL+ ++ NI G G +P ++G +D R DI+ +RPLR+FSS
Sbjct: 332 GVSSRFLIQVMIGDTASDLSITLLCNILQGNGNAIPFEIGVADKRYSDIVIIRPLREFSS 391
Query: 300 KEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
KEV Y N L VP++ T + +Q+ E FV LQ FPSTV+T+FRT DKL
Sbjct: 392 KEVALYTRLNHLRFTVVPNILTKKATNSCIQRQTEQFVNSLQAGFPSTVNTIFRTGDKLC 451
Query: 360 LDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVI 410
LD + CLLC+ P D +L + T + N EQ V+
Sbjct: 452 LDQEF--TFSPCLLCQRPKDRIEELETGEKIETEVEQDKRNNVIEQRHKVM 500
>gi|326426838|gb|EGD72408.1| hypothetical protein PTSG_00428 [Salpingoeca sp. ATCC 50818]
Length = 561
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 152/303 (50%), Gaps = 20/303 (6%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
+C +C + E LR D YC+ C K R +G+ ++M+ +KV++A+SG + S
Sbjct: 89 VCNKCGKKS-EFTLRKLDAYCRECFRDAFIRKARRDMGQHRIMKQMEKVMLAYSGGNRSS 147
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY------F 176
LL L+QE M + + + + ++ID+ ++ + E++ +A + AM+ F
Sbjct: 148 CLLALIQE-MTHAKKRPLRINPFVVHIDERTV----LPEQQRAHAPTSEAMREVASRYGF 202
Query: 177 DSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNL 236
+ + LE D ++ DV + +Q + +F + T ++++ +L+ LR +L
Sbjct: 203 ELHVYALEDLFAAD-LRRAQDVRDGTAQQ------LRSVFAALKTPTAKEEMLRILRFDL 255
Query: 237 LLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRD 296
L++ A TK+ + T LA + ++ G+GA + FS +R G + ++ R
Sbjct: 256 LVRIAHLHGTTKVMLGDCATQLAMHCLTLLTRGRGAAIAHLTDFSTEREG-VHFMKAFRL 314
Query: 297 FSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
S+KEV YN + + T A+ AS ++ E F+ L+ +FPST ++V R A
Sbjct: 315 LSAKEVALYNYTGSVPVLGRTCFTTKANFNASYERLTEHFIAGLEVDFPSTSASVIRIAQ 374
Query: 357 KLS 359
KL+
Sbjct: 375 KLT 377
>gi|169614117|ref|XP_001800475.1| hypothetical protein SNOG_10193 [Phaeosphaeria nodorum SN15]
gi|121746829|sp|Q0UDH1.1|CTU2_PHANO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|111061408|gb|EAT82528.1| hypothetical protein SNOG_10193 [Phaeosphaeria nodorum SN15]
Length = 382
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 160/348 (45%), Gaps = 47/348 (13%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK-------FRAALGKSKMMRPQDK 110
S +LC +C N +V+R K I C C +Y++ K FR S Q K
Sbjct: 8 SATSELCEKCKENISILVVRAKPI-CHDCFARYVHTKAIKRLESFRVNFAASPDQ--QRK 64
Query: 111 VLVAFSGSHSSMALLHLLQEGM--QLSSHKRILFSVCAIYIDDGSISQV---SISERKAN 165
+L+ S SS LLH+L + Q S R F++ + +D+GS+ + ER AN
Sbjct: 65 ILLPLSHGVSSTTLLHILDLHLNTQRSKTNRTGFAISVLVVDEGSLDPARLDKVRERYAN 124
Query: 166 NAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSE-INKMFQTVTTLSS 224
+ ++ D + L PD+ L + E +++ E + + ++T+ ++
Sbjct: 125 HDY--ASLPLHDVF------RLLPDDASLRAFLPESQVQEVCSTQEQLTSLIASLTSATA 176
Query: 225 RQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR 284
R +L TLR L+++ AK+ C I ++ T LA K +A + G+G +P + SD +
Sbjct: 177 RADVLTTLRTRLIVEHAKQTGCESILWGDSTTRLAEKTLAETAKGRGFSLPWQI--SDGK 234
Query: 285 TG-DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA-DPLASLQKAAES------- 335
+ DI PLRD KE+ Y DL+ P+L+ L +P + +A+ S
Sbjct: 235 SPFDINFHYPLRDVLKKELFSY---VDLAE---PALSALVYEPQSGATQASMSSKNTTID 288
Query: 336 -----FVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
+ ++ NFPS VS V RT KL + T N C LC P+
Sbjct: 289 DLMKQYFESVEENFPSIVSNVVRTTGKLEVP-TGATSNPRCSLCGMPV 335
>gi|66827077|ref|XP_646893.1| cytosolic thiouridylase subunit 2 [Dictyostelium discoideum AX4]
gi|74859091|sp|Q55EX7.1|CTU2_DICDI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|60475010|gb|EAL72946.1| cytosolic thiouridylase subunit 2 [Dictyostelium discoideum AX4]
Length = 523
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 154/317 (48%), Gaps = 37/317 (11%)
Query: 83 CKACLLQYLNHKFRAALGKSK-MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
C C + + KF+ + K + R +K+LVA SG S LL LL++ + S ++
Sbjct: 97 CWECYRELILKKFKLNIVKVRESKRDAEKLLVALSGGTCSSMLLELLKQCTEGSGKAKMF 156
Query: 142 FSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKL-YTDVAE 200
+ ++ID+ SI+ + ++ +E E +N+KL + ++
Sbjct: 157 LDIKCVHIDESSITP-------------------YQNHNDTIEFLKEFNNVKLGFPNLEI 197
Query: 201 LPLEQF--------AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTA 252
+PLE + +++ F +++ +S++ LL R LL+Q A KLNC K+
Sbjct: 198 IPLEDILGTVTPLGERTNQLKLQFAQLSSETSKEDLLLYYRNQLLIQVAHKLNCKKVILG 257
Query: 253 ETQTDLATKIIANISLGKGAHVPLDVG-FSDDRTGDIITLRPLRDFSSKEVIYYNIFNDL 311
+ LA +++A+ S G+G VP + + + DI +P+RDF KE+ Y + L
Sbjct: 258 TSSNRLAVQLVASTSKGRGFSVPNETSVIIEQPSNDIKFYQPMRDFLLKEIFIY--YRHL 315
Query: 312 SPVHVPSLATLAD--PLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNN 369
+ + VP + ++ + P S+ E F+ LQ TV T+ R+ DKL S++ N
Sbjct: 316 NILPVPVMFSILNLKPKHSINTLCEDFLHCLQDISNQTVHTLLRSVDKLI--SPSIDSNY 373
Query: 370 TCLLCKAPLDTRADLAS 386
C +C +PL T A++ S
Sbjct: 374 NCSICSSPL-TSAEIKS 389
>gi|170576528|ref|XP_001893664.1| hypothetical protein Bm1_10960 [Brugia malayi]
gi|158600192|gb|EDP37495.1| hypothetical protein Bm1_10960 [Brugia malayi]
Length = 341
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 152/316 (48%), Gaps = 43/316 (13%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMR--PQDKVLVAFSGSHSSMALLHLLQEGMQLSS 136
K +YCK+C +Q + HKF +A+GK ++ + Q + LV + G+++ LL L+ +G++ +
Sbjct: 24 KAVYCKSCFIQMVKHKFSSAIGKRRLYKDGEQRETLVVYDGTNAGAFLLSLVSQGLRADA 83
Query: 137 HKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYT 196
HKR+ + + + ++ + A I + K + C+E +Y
Sbjct: 84 HKRLTL-----------VPTIMVLLKETDEAVIGSIKKEVELIKQCIEAPW------IYV 126
Query: 197 DVAEL--------------PLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
+A + ++ ++ +++ + +T +YL + L ++ A+
Sbjct: 127 HIAAVFESNICDPQTSSICGIDHISQWAQLLTSCSSSSTREEMEYLCLNM---LCVRIAQ 183
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEV 302
KL+ K+ + + +LAT +++++L +G V +V D R D+ +RPLR+ + KE+
Sbjct: 184 KLDVHKVMLSMSADELATTTLSSLALARGPSVFHEVNVVDKRHADVTLIRPLREITEKEI 243
Query: 303 IYYNIF--NDLSPVHV-PSLATLADPLASLQKAAESFVTDLQTN-FPSTVSTVFRTADKL 358
N F +D ++V S D SLQ + F++DL N F TV+T+ A+K+
Sbjct: 244 ALVNRFEGSDRYILNVRKSRVKANDDEQSLQSVSRDFISDLVMNGFTGTVTTILSIANKV 303
Query: 359 SLDLTSMNVNNTCLLC 374
T+ C+LC
Sbjct: 304 QAPATN---RARCVLC 316
>gi|384499807|gb|EIE90298.1| hypothetical protein RO3G_15009 [Rhizopus delemar RA 99-880]
Length = 267
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 95/165 (57%), Gaps = 3/165 (1%)
Query: 212 INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKG 271
+ +F ++ ++++ LL ++ ++LL A++ CT IF ++ T A K+I+ + G+G
Sbjct: 102 LQALFSSIKKTTAKEDLLWHIKMDMLLTVARREGCTYIFFGDSATRQAIKMISWTAKGRG 161
Query: 272 AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVP--SLATLADPLASL 329
+PLD+ ++ T D+ +RP++D SKE+ YN F+ + + +P + T+ +S+
Sbjct: 162 YSLPLDISVDNELTFDVGIMRPMKDMLSKEIGLYNYFSGIHRLLLPPYNFGTMMPAKSSI 221
Query: 330 QKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLC 374
+ E F+ L+ FPSTVSTV RT KL+ M+ +C LC
Sbjct: 222 DRLTEGFINRLEREFPSTVSTVCRTTLKLTPS-KDMDYQRSCALC 265
>gi|312073409|ref|XP_003139507.1| hypothetical protein LOAG_03922 [Loa loa]
gi|307765331|gb|EFO24565.1| hypothetical protein LOAG_03922 [Loa loa]
Length = 353
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 145/315 (46%), Gaps = 40/315 (12%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMR--PQDKVLVAFSGSHSSMALLHLLQEGMQLSS 136
K YCK C +Q + HKF +A+GK ++ + Q + LV + G+++ LL L+ +G++ +
Sbjct: 19 KAAYCKPCFIQMVKHKFSSAIGKRRLYKDGGQRETLVVYDGTNAGAFLLSLVSQGLRADA 78
Query: 137 HKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYT 196
HKR+ + V + ++ + A I + K + C+ LY
Sbjct: 79 HKRLTL-----------VPTVMVLLKETDKAVIDSIKKEVEHIKECIAAPW------LYV 121
Query: 197 DVAELPLEQFAKDSEINKMFQTVTTLSSRQYLL------------QTLRQNLL-LQAAKK 243
+A + E D + + V +S LL + L N+L ++ A+K
Sbjct: 122 HIAAV-FESNISDPQTSSDIYGVDHISQWTQLLTSCSSSSTKKEVEYLCSNILCIRIAQK 180
Query: 244 LNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVI 303
L K+ + + +LA+ +++++L +G V V D R GD+ +RPLR+ S KE+
Sbjct: 181 LGVHKVMLSMSADELASTTLSSLALARGPSVFHAVNVVDKRHGDVTLIRPLREISEKEIA 240
Query: 304 YYNIF--NDLSPVHVPSLATLA-DPLASLQKAAESFVTDLQTN-FPSTVSTVFRTADKLS 359
N F +D ++V A D SLQ + F+ L N F TV+T+ A+K+
Sbjct: 241 LVNRFERSDRYILNVQKDRVKADDDDQSLQSVSRDFINGLIMNGFTGTVTTILSIANKVQ 300
Query: 360 LDLTSMNVNNTCLLC 374
TS C+LC
Sbjct: 301 APATS---RTRCVLC 312
>gi|409048810|gb|EKM58288.1| hypothetical protein PHACADRAFT_193412 [Phanerochaete carnosa
HHB-10118-sp]
Length = 503
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 152/371 (40%), Gaps = 66/371 (17%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL----------GKSKMMRPQDKV 111
+ C +C N G VV+R +YC+AC + + +KFR +L + ++P +
Sbjct: 24 RTCVKCKENAGNVVVR-HAVYCRACFIPQMTYKFRRSLEPYVNAKPDGPRRTALKPTGNL 82
Query: 112 LVAFSGSHSSMALLHLLQE--------------GMQLSSHKRILFSVCAIYID------- 150
LVAFSG S LL L+ G ++R+ V Y++
Sbjct: 83 LVAFSGGLGSTVLLDLVNRCYVSPDPTLLTADGGRDHPRNERVWKRVHVCYVECCDVLLG 142
Query: 151 --------DGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAE-- 200
+ Q+ E + Q A +++S F E N + D+++
Sbjct: 143 TKDRTEEVKNLVEQIQGVEFISLRIQDAFDSSWWNSIFH------EDSNGDVVVDLSDEM 196
Query: 201 LPLEQFAKD-----SEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQ 255
LP S + ++ T ++ L L + LL A N + + +
Sbjct: 197 LPFVTTGSSTQTPLSAMKAYLASLPTPTALPTTLNNLIRVLLQHTALNTNSSHLLFGTSL 256
Query: 256 TDLATKIIANISLGKGAHVPLDV---GFSDDR------TGDIITLRPLRDFSSKEVIYYN 306
T LA +I+N+S G G HV ++ F D R G + +RPL+D S KE +
Sbjct: 257 TSLAVSLISNVSQGGGFHVKEEMQEEWFPDARLAKNSKIGSVRLIRPLKDISVKECGVWA 316
Query: 307 IFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN 366
++ L + T + + + F+ L+T++PSTVST+ RT KLS +
Sbjct: 317 WWSRLRVIGREEW-TWPGAKPGIGRLTKDFIRGLETDYPSTVSTIVRTCGKLS---PKGS 372
Query: 367 VNNTCLLCKAP 377
+ CLLC+ P
Sbjct: 373 TSGQCLLCQRP 383
>gi|256087878|ref|XP_002580089.1| hypothetical protein [Schistosoma mansoni]
gi|353232128|emb|CCD79483.1| hypothetical protein Smp_090690 [Schistosoma mansoni]
Length = 375
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 151/344 (43%), Gaps = 51/344 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C + ++ + CK+C + HK GK K+ + + +A+SG +S
Sbjct: 25 CIKCQSPPAVLIRKDDPSLCKSCFINQCYHKINTIFGKYKLNSIINNMAIAYSGGQNSST 84
Query: 124 LLHL-LQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL L L++ KR +V ++ V S+ +AN I MK
Sbjct: 85 LLKLILKDNDNNGIMKRNPNNVPKVF------HLVESSDSQANLELITKIMK-------- 130
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
LE N + L++ + +E T ++LS++Q R NLL++ K
Sbjct: 131 -NTGLEYYN---------ITLDEITEVNEKWTSQLTSSSLSNKQRYHDYYRLNLLIKCTK 180
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEV 302
KLNC + + + K + I G+G + L F D+R DI +RPLRDF +KE+
Sbjct: 181 KLNCKYLMMGDCSNRMTVKYLLEIIEGRGNYSSLQTSFLDERYQDITIVRPLRDFLAKEI 240
Query: 303 IYYNIFNDLSPVHVPSLATLADPLAS----------LQKAAESFVTDLQT-NFPSTVSTV 351
+ F +H+ T DPL S L++ + F++ LQ FPST T+
Sbjct: 241 ALFAHF-----IHL-EYVTPNDPLTSIVLKNPNVNTLERLTQDFLSGLQAGGFPSTTGTI 294
Query: 352 FRTADKLSLDLTSMNVNNTCLLCKAPL---DTRAD---LASSSM 389
RT+ K+ L+ S TC C P+ D+ D LA+ SM
Sbjct: 295 LRTSSKIVLENDS---KITCRFCHFPISNTDSSNDPDRLATESM 335
>gi|347826873|emb|CCD42570.1| similar to cytoplasmic tRNA 2-thiolation protein 2 [Botryotinia
fuckeliana]
Length = 380
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 164/354 (46%), Gaps = 39/354 (11%)
Query: 53 VVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK----FRAALGKSKMMRPQ 108
V+ S + + LC RC +N + +R + + C+ C QY+ K GK PQ
Sbjct: 7 VLPSAEQPNVLCKRCAESNATLQIRSESV-CQKCFSQYVKTKAVKRMETYKGKRSSKVPQ 65
Query: 109 DKVLVAFSGSHSSMALLHLLQEGMQLSSHK--RILFSVCAIYIDDGSISQVSISERKANN 166
K+L+ S SS LLH+L +Q + R+ + + ++ID + ++R+A+
Sbjct: 66 -KLLLPLSFGPSSSCLLHILDGHLQTQQERMNRVSYELSVVHID----LYLDDADREASA 120
Query: 167 AQIATAMKYFDSY------FTCLEQALEPDNMKLYT-DVAELPLEQFAKDS-EINKMFQT 218
A + KY D Y L++AL+ + + + ++++P + S ++ + T
Sbjct: 121 ALL---QKYKDQYPRHSYSSYGLQEALQLEGIDWASLGISDVPTQSTEASSLDLQNIVST 177
Query: 219 VTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV 278
+++ +SR ++ TL LL+ AK+ C I +T T LA K + + G+G +P V
Sbjct: 178 MSSATSRADIVSTLLNRLLVDVAKRNECESILFGDTTTRLAEKTLTETAKGRGFSLPWQV 237
Query: 279 GFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVT 338
G PLRD KE++ ++ S +P L +P + + +++S
Sbjct: 238 SDGPSPYGLGFNY-PLRDILKKEIMTFSS----STTPLPELVVYREPPSHISASSKSTTI 292
Query: 339 D---------LQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRAD 383
D ++ NFPS V+ V RT+ K L ++ +V+ C +C P+ D
Sbjct: 293 DDLMAQYFESVEENFPSIVANVVRTSSK--LKPSTDHVSKGCGICGLPVAEGTD 344
>gi|402591216|gb|EJW85146.1| hypothetical protein WUBG_03944 [Wuchereria bancrofti]
Length = 357
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 148/314 (47%), Gaps = 39/314 (12%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMR--PQDKVLVAFSGSHSSMALLHLLQEGMQLSS 136
K +YCK+C +Q + HKF +A+GK ++ + Q + LV + G+++ LL L+ +G+ +
Sbjct: 24 KAVYCKSCFIQMVKHKFSSAIGKRRLYKDGEQRETLVVYDGTNAGAFLLSLVSQGLCADA 83
Query: 137 HKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYT 196
HKR+ + V + ++ + A I K + C+E +Y
Sbjct: 84 HKRLTL-----------VPTVMVFLKETDEAAIDNIRKEVELIKQCIEAPW------IYV 126
Query: 197 DVAELPLEQFAKD------------SEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKL 244
+A + E D S+ ++ + ++ S+R+ + L ++ A+KL
Sbjct: 127 HIAAV-FESNISDPQTSGICGIDHISQWAQLLTSCSSSSTREEIEYLCSNMLCVRIAQKL 185
Query: 245 NCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIY 304
K+ + + +LAT +++++L +G V +V D R D+ +RPLR+ + KE+
Sbjct: 186 GIHKVMLSMSADELATTTLSSLALARGPSVFHEVNVVDKRYVDVTLIRPLREITEKEIAL 245
Query: 305 YNIF--NDLSPVHV-PSLATLADPLASLQKAAESFVTDLQTN-FPSTVSTVFRTADKLSL 360
N +D ++V S D SLQ + F++DL N F TV+T+ A+K+
Sbjct: 246 VNRLEGSDRYILNVRKSRVKANDDEQSLQSVSRDFISDLVMNGFTGTVTTILSIANKVQA 305
Query: 361 DLTSMNVNNTCLLC 374
T+ C+LC
Sbjct: 306 PATN---RARCVLC 316
>gi|296422415|ref|XP_002840756.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636979|emb|CAZ84947.1| unnamed protein product [Tuber melanosporum]
Length = 406
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 158/395 (40%), Gaps = 61/395 (15%)
Query: 44 DEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK-------FR 96
++ IT N V +F C RC+TN+ + LR + + C C +Y+ K +R
Sbjct: 3 EQNITPNGATVPTF------CKRCSTNSSVINLRTEHL-CSDCFDKYVRSKCIKRMEAYR 55
Query: 97 AALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQ--LSSHKRILFSVCAIYIDDGSI 154
++L+ S SS LLHLL +Q L+ R F + ++ID+ +I
Sbjct: 56 VRYNPPDTDTSPRRLLLPLSFGISSTTLLHLLNSQLQNQLARTTRTGFVLIVVHIDESAI 115
Query: 155 SQ-VSISER--KANNAQIATAMKYF----------DSYFTCLEQALEPDNMKLYTDVAEL 201
+ V ++E +A +YF + E +E + + D E
Sbjct: 116 NPTVPLAEEGMRAVQEWFPDVGEYFIVRLEGIYGFSNAVKAFEMGVEEEERRGGGDWRE- 174
Query: 202 PLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATK 261
++ + + + +SR LLQ LR L+ + A+K C + +T T LA K
Sbjct: 175 ---------KLKGLLGALPSPTSRMDLLQILRTRLITELARKYACEAVLWGDTTTRLAEK 225
Query: 262 IIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLAT 321
++A + G+G VP D G + L PLRD KE++ Y +P+
Sbjct: 226 MLAETAKGRGFSVPWQTSDGDSPYG-VKFLYPLRDLLKKELVVYVSLEVPTPLRPLCFGA 284
Query: 322 LADPLASLQKAA-----------ESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNT 370
+ + AA + ++ +PS V+ V RTA KL + + +
Sbjct: 285 AEEGEGKKKHAAVGKGITIDELMTQYFEGIEGQYPSIVANVVRTAGKLVTEGGVVRIGR- 343
Query: 371 CLLCKAP---------LDTRADLASSSMGATRFSR 396
C +C P LD + L SS G +R
Sbjct: 344 CNICGLPRDGGGGELVLDAKTKLGESSSGEVNGNR 378
>gi|345560309|gb|EGX43434.1| hypothetical protein AOL_s00215g170 [Arthrobotrys oligospora ATCC
24927]
Length = 450
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 150/358 (41%), Gaps = 40/358 (11%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR---PQDKVLVAFS 116
A LC RCN N E+ +R + C+ C Y+ KF + ++ + K+L+A S
Sbjct: 18 AQNLCKRCNLNPPEITMR-HEALCRDCFQIYVRTKFTRHMEPYRVKKHSQTTKKLLLATS 76
Query: 117 GSHSSMALLHLLQ--EGMQLSSHKRILFSVCAIYIDDGSIS---QVSISERKANNAQIAT 171
SS LL L +Q+ +R + V ++ID+ +++ + S AN
Sbjct: 77 LGVSSTVLLDTLHWHRALQVERARRSEYDVYVVHIDETAVTGDTSTNTSSTDANTITTDQ 136
Query: 172 AMKYFDSYFTCLEQALEPDNMKLYT-------------DVAELPLEQFAKD--------- 209
++ +T E P ++YT +EL ++
Sbjct: 137 CLEKLKERYTQFEFIKVPLE-EIYTISGSTTPVDEIISTTSELSIDPSTTSSTSESQPPR 195
Query: 210 SEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG 269
S++ + ++ + +S+ L+ LR L+++ AK+ +C IF A++ T +A ++A ++ G
Sbjct: 196 SKLRTLLSSLNSRASQMDLINILRTRLIIELAKQRDCEAIFFADSMTKMAAMVLAEVTKG 255
Query: 270 KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASL 329
+G +P + G +RP R+ S E+I Y F L P + S T P
Sbjct: 256 RGHALPWLISDGPTPYGSAKIVRPFRELSKSEIISYTTFISLWPYSIISQETATSPQKPP 315
Query: 330 QKAAESFVTDLQTNFPSTVS------TVFRTADKLSL--DLTSMNVNNTCLLCKAPLD 379
KA + ++ F VS V +TA KL D + C +C P+D
Sbjct: 316 IKAKNQTIDEIMLKFFDDVSNAHLSTNVVKTAAKLEFADDRDRVERLGLCEICGLPMD 373
>gi|17560354|ref|NP_505729.1| Protein TUT-2 [Caenorhabditis elegans]
gi|74964169|sp|Q19906.2|CTU2_CAEEL RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|5824476|emb|CAA98270.2| Protein TUT-2 [Caenorhabditis elegans]
Length = 349
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 151/323 (46%), Gaps = 23/323 (7%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDK--VLVAFSGSHSSMALLHLLQEGMQLSS 136
K YC+ C +Q + +KFR++L K K+ + D L+ F G+ S LLH + + ++ +
Sbjct: 31 KAWYCQECFVQMVRNKFRSSLSKKKIYKDADARDTLIVFDGTLSGTFLLHQINDALKQIT 90
Query: 137 HKRILFSVCAIYI----DDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNM 192
+KR++ + + +D I Q+ I + + +++ ++ C ++ ++
Sbjct: 91 YKRLMVKPTVLVLVSLTEDTEI-QMVIKRIQEIKKSVLENVRWVVAHLAC---SMYDEDF 146
Query: 193 KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTA 252
KL E K S+ N++ + + + R+ L + L++ L + A + K
Sbjct: 147 KL----KENECNGVEKISDYNQLIASCSVPTYRKELERVLKEKCLQKIACSMGILKCMVP 202
Query: 253 ETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLS 312
+ DL I + LG+G + V +D R D + +RPL D S KE+ YN D+
Sbjct: 203 DHADDLGRLAIDQLCLGRGGSISTLVTVTDKRP-DFMLIRPLCDISKKELAVYNYLCDID 261
Query: 313 PVHVPSLATLADPLASLQKAAESFVTDLQT-NFPSTVSTVFRTADKLSLDLTSMNVNNT- 370
H +A + S+Q ++F+ L+ F ST++TV TA K+ TS+ +++
Sbjct: 262 K-HCIHIAQQNNQQKSVQTLTDAFICTLENEKFYSTINTVLSTAAKIH--NTSIGKDDSK 318
Query: 371 CLLCKAPLDTRADLASSSMGATR 393
C C + AD S+ A R
Sbjct: 319 CSFCNVEV---ADSVCSTCSAIR 338
>gi|302787685|ref|XP_002975612.1| hypothetical protein SELMODRAFT_54559 [Selaginella moellendorffii]
gi|300156613|gb|EFJ23241.1| hypothetical protein SELMODRAFT_54559 [Selaginella moellendorffii]
Length = 337
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 148/350 (42%), Gaps = 47/350 (13%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
+C +C + + C CL + KF+ L ++ QD++L+ FSG SS
Sbjct: 2 VCMKCKEEAAVALANQTEPMCAQCLRSSILGKFKTVLNTHALVSAQDRILLGFSGGPSSR 61
Query: 123 ALLHLLQEGMQLSSHKRIL----FSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDS 178
L L E + R L F + ++ID+G S ER + + +
Sbjct: 62 VALEFLAEIRSEALASRALNAPGFGLGVVFIDEGLAIGTSREERSRAVDVVEKIVSRLEL 121
Query: 179 YFTC--LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNL 236
LE+ + DN + D A +++ + +V + ++ +++ LR L
Sbjct: 122 PLVVRRLEEVFDDDNQE---DCA----------TQLKNLLDSVKDGTGKEDIVEILRMEL 168
Query: 237 LLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRD 296
L Q AKK TK+ + T +A ++++ + G+G + V + D R + L PLRD
Sbjct: 169 LEQVAKKEGYTKLVLGLSTTRIAARVVSATAKGQGFALAAGVQYVDSRWHAPVVL-PLRD 227
Query: 297 FSSKEVIYYNIFNDLSPVHVPSLATLADPLAS-LQKAAESFVTDLQTNFPSTVSTVFRTA 355
++KE+ F L + + + +TL +P AS + +FV L+ + S T+ RTA
Sbjct: 228 CATKELALLCHFFHLETLFLRNFSTLVEPSASTINSLCSNFVFTLREDNSSRDHTIVRTA 287
Query: 356 DKLS--------------------------LDLTSMNVNNTCLLCKAPLD 379
KL+ L + N+ C+LC+AP+D
Sbjct: 288 GKLTPFSFNHLAPSNGDSRSMRKRRGVKTELSNSGSNMEALCVLCRAPVD 337
>gi|281200695|gb|EFA74913.1| cytosolic thiouridylase subunit 2 [Polysphondylium pallidum PN500]
Length = 484
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 26/315 (8%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKM-MRPQDKVLVAFSGSHS 120
K C RC + +V R D C C + + KF+ + KS+ R + V+ SG S
Sbjct: 26 KNCIRCKESKPIIVFRTTDTLCWPCYREVITKKFKNNISKSRSDKRELETFAVSLSGGPS 85
Query: 121 SMALLHLLQEGMQLSSHK-RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSY 179
SM +L L+ + + + + ++ F V AI+ID + ++ + ++ T +
Sbjct: 86 SMVMLDLIDQCIGENVKRAKMFFKVHAIHIDQSVLRGLNGNSNSNDSEDNNTGLA----- 140
Query: 180 FTCLEQALEPDNMKLYTDVAELPLEQFAKDS---------EINKMF-QTVTTLSSRQYLL 229
+++ LE + +PLE D+ ++ ++F Q + +S++ LL
Sbjct: 141 ---IQKQLEEICSSYKVPLTIVPLENIYGDANETREQRRQQLVEVFEQMESNNTSKEDLL 197
Query: 230 QTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDII 289
+ R L+ + A KL +I + LA +++++ S G+G VP + D
Sbjct: 198 EHFRAQLVYETAHKLGLGRILNGSSSNRLAIRLLSSTSKGRGNSVPNETNLLDYHRTSTT 257
Query: 290 TLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL------ASLQKAAESFVTDLQTN 343
P+RDF KE+ Y+ + L + VPS + L AS+ E+F+ LQ
Sbjct: 258 VCHPMRDFLLKEIAIYHRYLGLQDLTVPSNPFHSINLNQSSHKASINTLCENFINTLQDI 317
Query: 344 FPSTVSTVFRTADKL 358
T+ T+ R+ DKL
Sbjct: 318 SSQTIHTLLRSVDKL 332
>gi|50546485|ref|XP_500712.1| YALI0B10263p [Yarrowia lipolytica]
gi|74689821|sp|Q6CF50.1|CTU2_YARLI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|49646578|emb|CAG82957.1| YALI0B10263p [Yarrowia lipolytica CLIB122]
Length = 424
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 158/358 (44%), Gaps = 45/358 (12%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMM--------RPQDK 110
A+ C RC+ G ++ + +C+ C + ++ K R A+ K++ P
Sbjct: 3 AESTCRRCD---GPTAIKTRQANFCQPCFITFIQQKQRKAMEGCKVLFARPGCVLPPAIN 59
Query: 111 VLVAFSGSHSSMALL---HLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNA 167
+LV S SS+ALL H E + F++ A++ID S+ E++ N
Sbjct: 60 ILVPISFGQSSLALLDMAHAQLEEQAKTYENAAGFTLNAVFID---CSEADPLEKEPNQI 116
Query: 168 QIATAMKYFDSYFTC--LEQALEP----------DNMKLYTDVAELPLEQFAKDSEINKM 215
++ + FTC L +A E D + ++E P + + ++
Sbjct: 117 ISELEKRFAHAKFTCIPLSKAFEGASSVTLKHNRDYTSFVSGISEEP-------TSVQQL 169
Query: 216 FQTVTTLSSRQYLLQTLRQNLLLQAAKKLN---CTKIFTAETQTDLATKIIANISLGKGA 272
+ T S+R+ ++ L+++L+++ AKK N T + T LA ++ G+G
Sbjct: 170 LSCIGTKSAREDIISVLQRHLIIEEAKKQNESLPTTVAWGHNATRLAELTLSLTIKGRGN 229
Query: 273 HVP---LDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLA-- 327
+ L+ D + + PL D S E+ +YN F ++S + V +++ +
Sbjct: 230 RIHAQVLEHKNPKDSISGLPEIHPLNDVLSYEIPFYNSFRNVSDLAVDTVSKPSQVTKNL 289
Query: 328 SLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLA 385
S+ + + ++QTNFPS STV RTA KL + CL+C +P+D LA
Sbjct: 290 SIDQLMHQYFENIQTNFPSIASTVVRTAAKLDDPNAAKQGLTPCLICASPVDPNQSLA 347
>gi|302783631|ref|XP_002973588.1| hypothetical protein SELMODRAFT_54556 [Selaginella moellendorffii]
gi|300158626|gb|EFJ25248.1| hypothetical protein SELMODRAFT_54556 [Selaginella moellendorffii]
Length = 337
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 146/350 (41%), Gaps = 47/350 (13%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
+C +C + + C CL + KF+ L ++ QD++L+ FSG SS
Sbjct: 2 VCMKCKEEAAVALANQTEPMCAQCLRSSILGKFKTVLNTHALVSAQDRILLGFSGGPSSR 61
Query: 123 ALLHLLQEGMQLSSHKRIL----FSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDS 178
L L E + R L F + ++ID+G S ER + + +
Sbjct: 62 VALEFLAEIRSEALASRALNAPGFGLGVVFIDEGLAIGTSREERSHAVDVVEKIVSRLEL 121
Query: 179 YFTC--LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNL 236
LE+ + DN Q +++ + +V + ++ +++ LR L
Sbjct: 122 PLVVRRLEEVFDDDN-------------QEDCSTQLKNLLDSVKDGTGKEDIVEILRMEL 168
Query: 237 LLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRD 296
L Q AKK TK+ + T +A ++++ + G+G + V + D R + L PLRD
Sbjct: 169 LEQVAKKEGYTKLVLGLSTTRIAARVVSATAKGQGFALAAGVQYVDSRWHAPVVL-PLRD 227
Query: 297 FSSKEVIYYNIFNDLSPVHVPSLATLADPLAS-LQKAAESFVTDLQTNFPSTVSTVFRTA 355
++KE+ F L + + + +TL +P AS + +FV L+ + S T+ RTA
Sbjct: 228 CATKELALLCHFFHLETLFLTNFSTLVEPSASTINSLCSNFVFTLREDNSSRDHTIVRTA 287
Query: 356 DKLS--------------------------LDLTSMNVNNTCLLCKAPLD 379
KL+ L + N+ C+LC+AP+D
Sbjct: 288 GKLTPFSFNHLAPSNGDSRSMRKRRGVKTELSNSGSNMEALCVLCRAPVD 337
>gi|156040764|ref|XP_001587368.1| hypothetical protein SS1G_11360 [Sclerotinia sclerotiorum 1980]
gi|226711142|sp|A7F190.1|CTU2_SCLS1 RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|154695744|gb|EDN95482.1| hypothetical protein SS1G_11360 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 371
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 147/312 (47%), Gaps = 37/312 (11%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK----FRAALGKSKMMRPQDKVLVAFSGS 118
LC RCN + +R + + C+ C LQY+ K GK PQ K+L+ S
Sbjct: 19 LCKRCNEVQATLQIRSESV-CQKCFLQYIKTKAVKRMETYKGKRSTKVPQ-KLLLPLSFG 76
Query: 119 HSSMALLHLLQE--GMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
SS LLH+L G+Q R+ + + ++ID + ++R+A+ A++ KY
Sbjct: 77 PSSSCLLHMLDGYLGIQHERMNRVSYELFVVHID----LYLDDADREASAARL---QKYK 129
Query: 177 DSY------FTCLEQALEPDNMKLYT-DVAELPLEQFAKDS-EINKMFQTVTTLSSRQYL 228
D Y L +AL+ + + + +++LP + S ++ K+ ++++ +SR +
Sbjct: 130 DQYPRHSYSSYGLHEALQLEGIDWQSLGISDLPTQDTKASSFDLQKIVSSLSSATSRADI 189
Query: 229 LQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDI 288
+ TL LL+ AK+ +C I +T T LA K + + G+G +P V G I
Sbjct: 190 VSTLLNRLLVDVAKRNDCESILFGDTTTRLAEKTLTETAKGRGFSLPWQVSDGPSPYG-I 248
Query: 289 ITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTD--------- 339
L PLRD KE++ ++ SP +P L P + + +++S D
Sbjct: 249 GFLYPLRDILKKEIMTFS--TSFSP--LPELVVHQAPPSHISASSKSTTIDDLMAQYFES 304
Query: 340 LQTNFPSTVSTV 351
++ NFPS V+ V
Sbjct: 305 VEENFPSIVANV 316
>gi|449542535|gb|EMD33514.1| hypothetical protein CERSUDRAFT_160477 [Ceriporiopsis subvermispora
B]
Length = 497
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 153/378 (40%), Gaps = 72/378 (19%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL----------GKSKMMRPQDKV 111
K C +C G +V+R +YCKAC + KFR AL + ++P +
Sbjct: 25 KNCVKCKDAPGNIVIR-HAVYCKACFFPLVAFKFRRALEPFVNPKPDGPRRTALKPAGNL 83
Query: 112 LVAFSGSHSSMALLHLLQE--------------GMQLSSHKRILFSVCAIYIDDGSISQV 157
L+ FSG S LL L+ G H ++ V Y++ G
Sbjct: 84 LLGFSGGVGSTVLLDLVNRSYIVNQKAELRRDGGKDHPRHDKVWKRVIVCYVELGD---- 139
Query: 158 SISERKANNAQIATAMKYF-DSYFTCL--EQALEPDNMK-LYTDVAELPLEQFAKDSEIN 213
++ RK A+IA + ++ D F L + A +P + +Y D A L ++ E+
Sbjct: 140 ALPRRKDKTAEIAEVVSHYEDVEFVPLRVQDAFDPSWWRRIYGDQALPQLRVSLENEELA 199
Query: 214 KMF----QTVTTLSSRQYL------------LQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
+ T S R YL LQ+L + LLL A + + + + T
Sbjct: 200 AVLTNPPSTEPLGSLRSYLSSLPTPTAVASALQSLIRVLLLHTAVETKSSHLLLGTSLTS 259
Query: 258 LATKIIANISLGKG---------AHVPLDVGFSDDRTG---------DIITLRPLRDFSS 299
LA +I+ I G G VP D+ + D G + +RPLRD
Sbjct: 260 LAISLISGIGQGAGFNIEQEIQEEWVP-DIQPASDSNGSEWLGGYQKGVRIIRPLRDVGL 318
Query: 300 KEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
KE ++ + L V A + + + F+ L+ ++PSTVST+ RT KLS
Sbjct: 319 KECAFWAWWEKLQVVGE-DRAGWPESRQDIGGLTKDFIMRLEKDYPSTVSTIVRTCAKLS 377
Query: 360 LDLTSMNVNNTCLLCKAP 377
+V+ C+LC+ P
Sbjct: 378 ---PRGDVSGKCVLCERP 392
>gi|452845414|gb|EME47347.1| hypothetical protein DOTSEDRAFT_69320 [Dothistroma septosporum
NZE10]
Length = 357
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 154/341 (45%), Gaps = 41/341 (12%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK-------FR---AALGKSKMMRPQDK 110
D LC RC +V+R + + C AC +Y + K FR AA GK Q K
Sbjct: 12 DALCRRCQDVEPAIVVRTEPL-CVACFSKYAHTKVVKRLETFRVRNAAPGK------QRK 64
Query: 111 VLVAFSGSHSSMALLHLLQEGM--QLSSHKRILFSVCAIYIDDGS----ISQVSISERKA 164
+L+ S S+ALLH+L + + Q+ R F + +++ S ++Q +++ KA
Sbjct: 65 LLLPLSLDACSLALLHILSQHLRAQVERSGRTGFRLHILHVCRQSALLDVNQAALANVKA 124
Query: 165 N-NAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLS 223
+ + S T LE D ++ DV + ++ + +++ + T+ +
Sbjct: 125 RYPGHVYHTLP--SSQVTSLE-----DASNIFPDVTASRTDNYSLEGVFHRLLDSATSAT 177
Query: 224 SRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDD 283
+RQ L +TL+ L++ A++ NC I +++ T LA + +A + G+G +P V D
Sbjct: 178 ARQDLARTLQARLVVDYARRENCEAIMWSDSTTKLAERTLAETAKGRGFALPWLVADGDT 237
Query: 284 RTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLA------SLQKAAESFV 337
G + PLRD +KEV Y F L P + LA ++ + +
Sbjct: 238 PHG-LTFYYPLRDLLTKEVQAYVSF--LEPTMDDCIVKTDRKLAVSTKNTTIDDLVQRYF 294
Query: 338 TDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
++ +PS V+ V RT KL + + V C LC PL
Sbjct: 295 ESVEQEYPSIVANVVRTTSKLK-PPSLVEVEQQCELCSMPL 334
>gi|341899328|gb|EGT55263.1| hypothetical protein CAEBREN_17008 [Caenorhabditis brenneri]
Length = 351
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 138/305 (45%), Gaps = 22/305 (7%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQD--KVLVAFSGSHSSMALLHLLQEGMQLSS 136
K YC+ C +Q + +KFR+AL K K+ + D + L+ F G+ S LLH + + ++ +
Sbjct: 31 KAWYCQECFIQMVRNKFRSALSKKKIYKDADARETLIVFDGTPSGAFLLHQIDDALKQIT 90
Query: 137 HKRILFS---VCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMK 193
+KR++ + + + D Q + + + + + ++ C
Sbjct: 91 YKRLMVKPTVLVLVSVTDPEKIQHVMDRVQDIKTALLENVDWIIAHVACC---------- 140
Query: 194 LYTDVAEL---PLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIF 250
+YT+V + K E +M T + R+ L + +R+ L + ++ L+ +K
Sbjct: 141 MYTEVKDFDNTKCNGTEKIPEYIEMLSACTVPTYREELKRIMREKCLQKISEALHISKCM 200
Query: 251 TAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFND 310
+ L I + LG+G + V D R + + +RPL D S KEV+ YN
Sbjct: 201 VPDDADILGRLAIDQLCLGRGGSLSPIVTVLDKR-NNFMLIRPLCDVSKKEVVIYNYLCG 259
Query: 311 LSPVHVPSLATLADPLASLQKAAESFVTDLQ-TNFPSTVSTVFRTADKLSLDLTSMNVNN 369
+ H +A + S+Q +SF+ L+ F ST++TV TA K+ + TS +
Sbjct: 260 IDK-HCIQIAGTNSEVKSVQSLTDSFIRTLEDEKFYSTINTVLSTASKIH-NTTSGKDGS 317
Query: 370 TCLLC 374
C LC
Sbjct: 318 HCSLC 322
>gi|302684855|ref|XP_003032108.1| hypothetical protein SCHCODRAFT_67872 [Schizophyllum commune H4-8]
gi|300105801|gb|EFI97205.1| hypothetical protein SCHCODRAFT_67872 [Schizophyllum commune H4-8]
Length = 455
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 40/345 (11%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL--------GKSKMMRPQDKVLV 113
K C +C G +V+R +YC+ C L ++ R L GK ++M+ +++
Sbjct: 25 KTCVKCKAARGSIVIR-HAVYCRDCFTDLLLYRSRRILDLSVHGGSGKKRIMKAPGNLMI 83
Query: 114 AFSGSHSSMALLHLL--------------QEGMQLSSHKRILFSVCAIYIDDGSISQVSI 159
+SG S LL L+ + G+ H R+ + A YID IS +
Sbjct: 84 GYSGGLGSSVLLDLVTRTYFTDRSEDFVQRSGVNHPRHTRVWENAYATYID---IS-AAF 139
Query: 160 SERKANNAQIATAMKYFDSYFTC---LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMF 216
+ + + +K + + LE A + + + E L D +
Sbjct: 140 EGLQDHTEEARNCLKRYPNIELVSLRLENAFDASWWRSTSGGPEGSLAVDLNDGPFRALR 199
Query: 217 QTVTTLSSRQYL---LQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAH 273
Q +++L ++ + +QTL + LLL A C+ + + T L+ +IA+IS G G
Sbjct: 200 QYLSSLPTQTAVHSAVQTLIRMLLLHTAVSRGCSHLALGTSLTSLSVSLIASISQGGGFA 259
Query: 274 VPLDVGFSDDRTG-DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKA 332
V ++G + G + +RPL + KE + + L V + + + SL K
Sbjct: 260 VREELGEDWVKEGARLKIIRPLHEIGMKECAAWAWWESLPVVGKQKIPGGKNGITSLTK- 318
Query: 333 AESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAP 377
F+ L+ ++PSTVST+ RT KL+ S C LC+ P
Sbjct: 319 --DFIVGLEKDYPSTVSTIARTCAKLAPKQVS---EFRCALCQRP 358
>gi|403362663|gb|EJY81062.1| DUF2392 domain containing protein [Oxytricha trifallax]
Length = 583
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 153/345 (44%), Gaps = 51/345 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C N + +D CK C + H+F+ +L + + D L+ SG +SMA
Sbjct: 116 CFKCKKNRANFTNK-QDKVCKDCFKEMFVHRFKQSLRSNLKIWKDDLNLICISGGSNSMA 174
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQ--IATAMKYFDSYFT 181
LL L+ + + +S +++ F V Y+D+G + ++ N + I T +Y +Y
Sbjct: 175 LLDLMHQSLFGTSQRKMFFRVHIFYVDEGRVVYGWDEQKHQENIEFIIKTCQRYGFTYTI 234
Query: 182 CLEQALEPDNMKLYTDV--------AELP--LEQFAKDSEI------------------- 212
+++ + + ++V AE+ +E+ K EI
Sbjct: 235 VPLESVYDIGLGVNSEVNVDLKMIDAEMAQKIEEEKKQDEIAHSVPANQEEIQNQIMDCQ 294
Query: 213 ---------NKMFQTVTTLSS-RQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
++ +++ T S+ R+ L+ L++ ++ A K N KI + +A ++
Sbjct: 295 DIEGKREMLKQLIESLPTHSNFREDLILYLKKWVISHFALKYNFKKILLGTSGHKVAVQL 354
Query: 263 IANISLGKGAHVPLDVGFSDDRT--GDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLA 320
+A ++ G+G+ + ++ + DD+ G I + P+R+F KE+ +N + + + SLA
Sbjct: 355 LAQLAKGRGSSIAHEISYIDDKNFGGRITFMNPMREFLHKEIALFNYLHKVEILLQKSLA 414
Query: 321 TLADP------LASLQKAAESFVTDLQTNFP-STVSTVFRTADKL 358
L +P S E F LQ F +TV TV + +KL
Sbjct: 415 QLNNPFSHAPAFGSADMLIEKFFDKLQDRFNVNTVPTVVKLTNKL 459
>gi|91093457|ref|XP_966933.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
Length = 200
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VVLR KD YC+ C L HKF+A LGK K++RP D+VLV H S A
Sbjct: 30 CNKCKEEIPIVVLRSKDKYCRKCFLAGATHKFKATLGKHKLIRPNDRVLVIHKCGHPSTA 89
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER----KANNAQIATAMKYFDSY 179
LLH ++ G+ L +HK++ F ++I++ + +++++R KA ++A F Y
Sbjct: 90 LLHFIRSGLDLETHKKLRFEPVVLFIEE--FTHLTVTDRSEILKAIEKEVACF--NFQVY 145
Query: 180 FTCLEQAL 187
T L + +
Sbjct: 146 LTSLAKLI 153
>gi|451851711|gb|EMD65009.1| hypothetical protein COCSADRAFT_170827 [Cochliobolus sativus
ND90Pr]
Length = 376
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 156/345 (45%), Gaps = 45/345 (13%)
Query: 60 ADKLCPRCNTNNGEVVLRLK-DIYCKACLLQYLNHK-------FRAALGKSKMMRPQDKV 111
+++ C RC G VL ++ + C C +Y++ K FR G K Q +V
Sbjct: 10 SEEPCRRCK---GVSVLVVRSEPLCHDCFARYVHTKCIKRLESFRVNFGAEK----QRRV 62
Query: 112 LVAFSGSHSSMALLHLLQEGM--QLSSHKRILFSVCAIYIDD-GSISQVSISERKANNAQ 168
LV S SS++LLH+L + Q S R F + A++I + G Q K
Sbjct: 63 LVPLSFGFSSISLLHVLDLHLKTQKSKTGRTGFEINAVHIQEPGHAVQTEELLEKVR--- 119
Query: 169 IATAMKYFDSYFTCLEQA----LEPDNMKLYTDVAELPLEQFAKDS----EINKMFQTVT 220
+Y D + L L PD+ L T LP +Q +S + M +++T
Sbjct: 120 ----AQYPDHDYVSLPLHDVFRLIPDDASLKT---LLPQDQQKAESSPEDQFVHMIKSLT 172
Query: 221 TLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF 280
+ ++R L+ TLR L+++ AK C I ++ T LA K +A + G+G +P +
Sbjct: 173 SATARADLISTLRTRLIVEYAKLAGCESILWGDSTTTLAQKTLAETAKGRGFSLPWQISD 232
Query: 281 SDDRTGDIITLRPLRDFSSKEVIYYNIFND---LSPVH----VPSLATLADPLASLQKAA 333
+ G + PLRD KE+I Y +D +S VH P+ A+ + ++
Sbjct: 233 GESPFG-LQFHYPLRDVLKKELISYVNMSDSGLVSLVHESSSGPTQASTSSKNTTIDDLM 291
Query: 334 ESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
+ + ++ NFPS V+ V RT KL +++ + C LC P+
Sbjct: 292 KQYFESVEENFPSIVANVVRTTGKLQARPDALS-DPRCSLCSMPV 335
>gi|356504783|ref|XP_003521174.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Glycine
max]
Length = 458
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 35/292 (11%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS---MALLHLLQEGMQL---S 135
+C C L KFR A+ + M+ P DKVLVAFSG SS + +H +QE Q +
Sbjct: 59 FCADCFKTNLFGKFRFAVTSNAMITPTDKVLVAFSGGPSSRVALQFVHDMQERAQRNFDA 118
Query: 136 SHKRIL--FSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMK 193
S R L F V ++ID+ ++ + +E + ++ + +L P +
Sbjct: 119 SRDRSLPVFGVGVVFIDESAVLPIPSNEMEEAVEVVSEVVS-----------SLAPPRKE 167
Query: 194 LYTDVAELPLEQ-FAKDS-----EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
L+ +P+E ++ DS I K+ TV + R+ +L LR L + A +
Sbjct: 168 LHI----VPIETVYSSDSGDGKERITKVVNTVIDPTGREDVLLCLRMLALQKVASEFGYN 223
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
+I + +A +I+ G+G +P D+ + D R ++ + PLRD ++E+ N+
Sbjct: 224 RIILGSCISRIACHVISATVKGQGYSLPADIQYVDARW-EVPVVLPLRDCFAQEI---NM 279
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
L + L+T D +S+ SFV LQ PS ST+ RTA KL+
Sbjct: 280 LCHLDGLKTVKLST--DLCSSINGLVSSFVALLQEENPSRESTIVRTAGKLT 329
>gi|19112490|ref|NP_595698.1| cytosolic thiouridylase subunit Ctu2 [Schizosaccharomyces pombe
972h-]
gi|74626006|sp|Q9UUC7.1|CTU2_SCHPO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|5689995|emb|CAB52040.1| cytosolic thiouridylase subunit Ctu2 [Schizosaccharomyces pombe]
Length = 366
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 156/341 (45%), Gaps = 48/341 (14%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQ------DKVLV 113
AD C +C+ N VL D C +C ++ + +K R +++RP + ++
Sbjct: 10 ADSKCSKCD--NKATVLTKSDAVCDSCFVRRIENKIRRQF---ELVRPNLQGRKSKRAML 64
Query: 114 AFSGSHSSMALLHLLQEGMQLSSHK----RILF-SVCAIYIDDGSISQVSISERKANNAQ 168
A SG SSMA+L + LS ++ R +F + A++ G+ S V A +
Sbjct: 65 AISGGISSMAML---ETANYLSKYRDDNYRPMFDELLAVHFQWGTDSAV------AKTIE 115
Query: 169 IATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYL 228
+ + Y F + +A E N + TD + +E A + + N + +++L+SRQ L
Sbjct: 116 ESISKNYPKCPFKVIGEA-ELLNRTIATD-SRGNIEINADNEKFNP--EVISSLASRQDL 171
Query: 229 LQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF-SDDRTGD 287
L +R LL+ A+K NC I ++ T +A +++ ++ G+G +P S D
Sbjct: 172 LYRIRDKLLVSYARKANCDTIVFGDSGTTIAARVLELVAEGRGFAIPWYTSVCSKLPNCD 231
Query: 288 IITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLA-----SLQKAAESFVTDLQT 342
LRPLR+ S ++ Y +++ LA D L ++ ES+ + L
Sbjct: 232 TFLLRPLREVLSSDLKSY--------MNIKGLA-FCDSLIEARPNTIHGVTESYFSSLND 282
Query: 343 NFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRAD 383
FPS VSTV + + KL + T C +C P+ A+
Sbjct: 283 TFPSLVSTVVKMSSKLHVPSTEA----ICTICNLPMQEDAE 319
>gi|119587180|gb|EAW66776.1| hypothetical protein LOC348180, isoform 1, isoform CRA_b [Homo
sapiens]
Length = 207
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 28 CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSS 87
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFT 181
++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++ F +
Sbjct: 88 MVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATGFPWHVV 147
Query: 182 CLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSS 224
LE+ L+ EL + A + ++ Q L +
Sbjct: 148 ALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDSFLQQQHVLGA 190
>gi|194388910|dbj|BAG61472.1| unnamed protein product [Homo sapiens]
Length = 213
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 28 CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSS 87
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFT 181
++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++ F +
Sbjct: 88 MVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATGFPWHVV 147
Query: 182 CLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSS 224
LE+ L+ EL + A + ++ Q L +
Sbjct: 148 ALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDSFLQQQHVLGA 190
>gi|328869410|gb|EGG17788.1| cytosolic thiouridylase subunit 2 [Dictyostelium fasciculatum]
Length = 481
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 146/332 (43%), Gaps = 26/332 (7%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQ-DKVLVAFSGSHS 120
K C RC ++ R D C C + + KF+ + + + + +++++A SG S
Sbjct: 28 KTCVRCKEKPSIILFR-TDPMCWDCYHEMIIKKFKLNVTRFRDNKKDVERLMLAVSGGVS 86
Query: 121 SMALL----HLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
S ++ H + + ++ F VC ++I+ + QVS R + A +
Sbjct: 87 SRVMMDLVSHFIGGNGSKGTKAKLFFKVCVVHINISCLDQVS--GRATEQDHLDHAQRQA 144
Query: 177 DSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKM---------FQTVTTLSSRQY 227
+ LE+A + Y +PLE E NK F T+ +S++
Sbjct: 145 N-LVRSLEEAAQQYEFPFYN----IPLENIYGCDESNKKERQQMLIDSFTQFTSSTSKED 199
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD 287
+L+ R LL + A L KI + LAT+++++ S G+G +VP + D D
Sbjct: 200 ILEHFRNQLLFETAHSLGFNKILFGTSSNRLATRLLSSTSKGRGYNVPNETNMVDQHK-D 258
Query: 288 IITLRPLRDFSSKEV-IYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPS 346
I ++P+RDF KE+ IY+ + + + L + S+ E F+ LQ
Sbjct: 259 IRFIQPMRDFLLKEIHIYHRKMSFIDYTNHNVLLFNNNSKGSINALCEKFINHLQDISNQ 318
Query: 347 TVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
T+ T+ R+ DKL + +V +C +C A L
Sbjct: 319 TIHTLLRSVDKLVSPIDENSV--SCSICCANL 348
>gi|393221495|gb|EJD06980.1| hypothetical protein FOMMEDRAFT_118050 [Fomitiporia mediterranea
MF3/22]
Length = 496
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 154/381 (40%), Gaps = 69/381 (18%)
Query: 57 FSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL----------GKSKMMR 106
F R++K C +C G +V+R +YCK C + KFR L + K++R
Sbjct: 7 FDRSNK-CIKCKVEKGNIVIR-HAVYCKNCFFPLVTAKFRRCLDPYINEIPDAPRRKILR 64
Query: 107 PQDKVLVAFSGSHSSMALLHLL--------------QEGMQLSSHKRILFSVCAIYIDD- 151
+LV FSG S LL + ++G S R+ Y++
Sbjct: 65 APGNLLVGFSGGLGSTVLLDITSRIYFPSGDGSRDDKKGKAHPSKNRVWDKAYVCYVEVC 124
Query: 152 GSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP-----LEQF 206
+ + + +R + + +F+ LE A + + + V E P F
Sbjct: 125 NAFPEGQMKDRTVDIQKFFENNDHFELLPVRLEDAFD---SRWWNKVGEWPSLSTRKADF 181
Query: 207 AKD-------------------SEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
++D S + ++ T ++ Q + + + +L+ A L C+
Sbjct: 182 SRDELPLFMEALQSNETRGNPVSLLRAYLSSLPTPTAVQSAISSFIRLILIHTANHLQCS 241
Query: 248 KIFTAETQTDLATKIIANISLGKGAHV----------PLDVGFSDDRTG-DIITLRPLRD 296
+ + T L+ +I ++ G G+ + P D+ DDR + +RPLRD
Sbjct: 242 HLLLGTSLTSLSVSLITAVAQGSGSQICEEFFEEWRSPPDMHEPDDRRNKSVKVVRPLRD 301
Query: 297 FSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
KE ++ + +LS V L + + ++ + F+ L+ ++PSTVST+ RT
Sbjct: 302 IGMKECAAWSYWKNLSVVEREKLPGFSS-VRTIGSLTKKFIVGLEKDYPSTVSTIVRTCA 360
Query: 357 KLSLDLTSMNVNNTCLLCKAP 377
KL+ + C+LC+ P
Sbjct: 361 KLT---PKEEAHEICVLCQRP 378
>gi|353234639|emb|CCA66662.1| hypothetical protein PIIN_00344 [Piriformospora indica DSM 11827]
Length = 390
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 153/359 (42%), Gaps = 53/359 (14%)
Query: 43 GDEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKS 102
G EE Q R K C +C + G +VLR +YC+ C + +FR +
Sbjct: 9 GGEERMQKRRKGLG-----KTCIKCKRDAGALVLR-GLVYCRPCTEALVVQRFRKVI--D 60
Query: 103 KMMRPQDK----VLVAFSGSHSSMALLHLLQEGMQLSS---HKRILFSVCAIYIDDGSIS 155
+ P + +A+SG S LL L+ + SS K + IY+D +I
Sbjct: 61 DHIPPNSASSSILAIAYSGGLGSTLLLELVANILGSSSTRSRKHRWDHIDVIYVDQSAIE 120
Query: 156 QVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQ-FAKDSEI-- 212
+S + ++ A + SY PD + ++PLE F + S++
Sbjct: 121 DLSGYQGPSS----AEVQRIVTSY---------PD-----FRLTQVPLEACFDEGSDVQP 162
Query: 213 ----NKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISL 268
Q++ T + + L + LL + AK L T + + L+ +++NI
Sbjct: 163 SRLLRSHIQSIPTRTGMVDSINLLTRRLLERTAKSLGATHLILGRNMSSLSIALLSNICS 222
Query: 269 GKGAHVPLDVGFSDDRTG---DIITLRPLRDFSSKEVIYYNIFNDLSPV-HVPSLATLAD 324
G+GA + SD+ +++ PLRD SKE Y + +L + V SL +
Sbjct: 223 GRGASI------SDETVASWNGLLSFNPLRDLGSKECASYVYWKNLKVISRVNSLEDWSG 276
Query: 325 PLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRAD 383
AS+ F+T L+ ++PSTVST+ +T K+S + + C LC P+ + D
Sbjct: 277 TSASISHLTREFITGLERDYPSTVSTITKTCAKVS---PRGDRPSQCSLCYRPMKSATD 332
>gi|308478536|ref|XP_003101479.1| CRE-TUT-2 protein [Caenorhabditis remanei]
gi|308263125|gb|EFP07078.1| CRE-TUT-2 protein [Caenorhabditis remanei]
Length = 350
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 140/305 (45%), Gaps = 22/305 (7%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQD--KVLVAFSGSHSSMALLHLLQEGMQLSS 136
K YC+ C +Q + +KFR+AL K K+ + D + LV + GS S LL+ + + ++ +
Sbjct: 31 KAWYCQECFIQMVKNKFRSALSKKKIYKDADARETLVVYDGSPSGAFLLNQIDDALKQIT 90
Query: 137 HKRILFS---VCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMK 193
+KR++ + + + + + Q + + ++ +++F ++ C
Sbjct: 91 YKRLMVQPTVLVLVSVTEETEIQRVVERVEELKKELLENVRWFIAHVAC----------S 140
Query: 194 LYTDVAELP---LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIF 250
+YTD +L K E + + + + R+ L + LR+ L +K L +K
Sbjct: 141 MYTDSVDLEGLRCNGTEKIPEYTDLLSSCSVPTYRKELERILREKCLQNISKSLKISKCM 200
Query: 251 TAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFND 310
+ DL + + LG+G + V +D R+ D + +RP+ D S +E+ YN
Sbjct: 201 VPDDADDLGRLALDQLCLGRGGSLSPLVTVTDKRS-DFLLIRPICDLSKREISIYNYLCA 259
Query: 311 LSPVHVPSLATLADPLASLQKAAESFVTDLQ-TNFPSTVSTVFRTADKLSLDLTSMNVNN 369
+ ++ S+Q ++F+ L+ F ST++TV TA K+ T+ +
Sbjct: 260 IDKQYIQFHTHSNTQDRSVQALTDAFIRTLEDEKFYSTINTVLSTASKIH--NTNGKDGS 317
Query: 370 TCLLC 374
C+LC
Sbjct: 318 RCVLC 322
>gi|451995488|gb|EMD87956.1| hypothetical protein COCHEDRAFT_1183108 [Cochliobolus
heterostrophus C5]
Length = 376
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 153/345 (44%), Gaps = 45/345 (13%)
Query: 60 ADKLCPRCNTNNGEVVLRLK-DIYCKACLLQYLNHK-------FRAALGKSKMMRPQDKV 111
+++ C RC G VL ++ + C C +Y++ K FR G K Q +V
Sbjct: 10 SEEPCRRCK---GVSVLVVRSEPLCHDCFARYVHTKCIKRLESFRVNFGAEK----QRRV 62
Query: 112 LVAFSGSHSSMALLHLLQEGM--QLSSHKRILFSVCAIYIDD-GSISQVSISERKANNAQ 168
LV S SS++LLH+L + Q S R F + A++I + G Q A
Sbjct: 63 LVPLSFGFSSISLLHVLDLHLKTQKSKTGRTGFEISAVHIQEPGHAVQ-------AEELL 115
Query: 169 IATAMKYFDSYFTCLEQA----LEPDNMKLYTDVAELPLEQFAKDS----EINKMFQTVT 220
+Y D + L L PD+ L T LP +Q +S + M ++T
Sbjct: 116 EKVRAQYPDHEYVSLPLHEVFRLVPDDASLKT---LLPQDQQQAESSPEDQFVHMVNSLT 172
Query: 221 TLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF 280
+ ++R ++ TLR L+++ AK C I ++ T LA K +A + G+G +P +
Sbjct: 173 SATARADVISTLRTRLIVEHAKLAGCESILWGDSTTTLAQKTLAETAKGRGFSLPWQISD 232
Query: 281 SDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV-------PSLATLADPLASLQKAA 333
+ G + PLRD KE+I Y +D V + P+ A+ + ++
Sbjct: 233 GESPFG-LQFHYPLRDVLKKELISYVNMSDSDLVSLVQETSSGPTQASTSSKNTTIDDLM 291
Query: 334 ESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
+ + ++ +FPS V+ V RT KL +++ + C LC P+
Sbjct: 292 KQYFESVEESFPSIVANVVRTTGKLHARPDALS-DPQCSLCSMPV 335
>gi|392564276|gb|EIW57454.1| hypothetical protein TRAVEDRAFT_72547 [Trametes versicolor
FP-101664 SS1]
Length = 528
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 149/390 (38%), Gaps = 86/390 (22%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL----------GKSKMMRPQDKV 111
K+C +C G +V+R +YCK C + + H+FR AL + ++P +
Sbjct: 24 KICVKCKIAQGNLVIR-HAVYCKECFISLIVHRFRRALEPAVNPKPDGPRRTALKPTGNL 82
Query: 112 LVAFSGSHSSMALLHLLQE--------------GMQLSSHKRIL--FSVCAIYIDDGSIS 155
LV FSG S LL L+ G H+R+ +VC + + D +
Sbjct: 83 LVGFSGGLGSSVLLELVHRCYVALDKTTMPADGGSHHPRHERVWKKVTVCYVEVCD---A 139
Query: 156 QVSISERKANNAQIATAMKYFDSYFTCL--EQALEPD-----NMKLYTDVAELPLEQFAK 208
+ +R AQ + +Y D F L + A +P K Y + L A
Sbjct: 140 FPGMKDRSDEIAQ--SVARYDDLEFVSLRIQDAFDPSWWERTGGKPYPPELGVTLGDEAL 197
Query: 209 DSEINKMFQTVTTLSSRQYL------------LQTLRQNLLLQAAKKLNCTKIFTAETQT 256
S R YL +QTL + LLL +A + N + + + T
Sbjct: 198 LLGSLSSASPDPLTSLRAYLTSLPTPTAITSTIQTLTRLLLLHSALQTNSSHLVLGTSLT 257
Query: 257 DLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT-------------------------- 290
LA +I+ ++ G G ++ + +D T D +
Sbjct: 258 SLAVSLISGVAQGAGFNIREET--QEDWTPDTVPTADPTHPRPTRKEKGKKATQVPGKRA 315
Query: 291 ---LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPST 347
+RPLRD KE + + + P+ A + ++F+ L+ ++PST
Sbjct: 316 VRIVRPLRDIGMKECAAWAWWAGV-PIVGKEKWGWAGAKPGIGTLTKAFIVGLEKDYPST 374
Query: 348 VSTVFRTADKLSLDLTSMNVNNTCLLCKAP 377
VST+ RT KL+ V+ C+LC P
Sbjct: 375 VSTIVRTCGKLA---PKGEVSGACILCGRP 401
>gi|290999721|ref|XP_002682428.1| predicted protein [Naegleria gruberi]
gi|284096055|gb|EFC49684.1| predicted protein [Naegleria gruberi]
Length = 472
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 136/283 (48%), Gaps = 27/283 (9%)
Query: 92 NHK-FRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
NHK F+ L + + D VLV FSG +S +L +LL + + + ++ F +++D
Sbjct: 102 NHKQFKINLNEK--IAKGDTVLVCFSGGMNSTSLANLLHNCVSPNPNWKLHFKWEYLFVD 159
Query: 151 DGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDS 210
++ ER++ Q+ + T L+++ +++ D+ EQ KD
Sbjct: 160 VTGALGLNSEERESVRQQVR-------DFCTNLDESNNIIHIRSIEDMLFDGDEQRMKDF 212
Query: 211 EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK 270
+F+ T+S + L+ + + + + A + N ++ T E+ +A +++ IS G+
Sbjct: 213 ----IFRQFNTMSVHEDLISQMVKTCIYKFAVEKNFKQVLTGESANHMAINVLSEISKGR 268
Query: 271 GAHVPLDVGFSDD----------RTGDIIT-LRPLRDFSSKEVIYYNIFNDLSP-VHVPS 318
G VPL + D T +IT +RP+R F S E+ YN + + V V +
Sbjct: 269 GYIVPLQIVLEDKTMNNVPSFNPETDPVITYIRPVRSFLSNELAMYNHWTGIKKYVFVKN 328
Query: 319 LATLADPLAS-LQKAAESFVTDLQTNFPSTVSTVFRTADKLSL 360
L T A S + + E F++ LQ +FPSTV + RT +KL +
Sbjct: 329 LTTKAGARQSTINRLVEDFISMLQKDFPSTVHAILRTIEKLKV 371
>gi|225441840|ref|XP_002278289.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2 [Vitis vinifera]
gi|297739656|emb|CBI29838.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 36/313 (11%)
Query: 63 LCPRCNTN-----NGEVVLRLKDI--YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF 115
LC +C N +G V + DI +C C L KF+ A+ + M+ P D VLVAF
Sbjct: 46 LCLKCKVNETLASSGTVSVD-GDIGRFCFDCFRGNLFGKFKLAVTSNAMISPTDNVLVAF 104
Query: 116 SGSHSSMALLHLLQEGMQLSSHKRI---------LFSVCAIYIDDGSISQVSISERKANN 166
SG SS L + E MQ + K +F V ++D+ ++S++ E
Sbjct: 105 SGGPSSRVALQFVHE-MQHKAQKNFDASRDRSLPVFGVGVAFVDESAVSRIPSDE----- 158
Query: 167 AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQ 226
A++ S + L P + + E +D + ++ V ++ ++
Sbjct: 159 --FDKAIQDMKSIVS----NLAPPDKAFHVVPIESVYSSNGRD-RLEELLNAVKDVTGKE 211
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
LLQ LR L + A + TK+ + +A +I+ G+G +P D+ + D R
Sbjct: 212 DLLQHLRMLSLQKNAYENGYTKLLLGSCTSRIACHVISATVKGQGYSLPADIQYVDARW- 270
Query: 287 DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPS 346
+I + PLRD ++E+ + L + V L P + + SFVT LQ PS
Sbjct: 271 EIPVVLPLRDCLAQELNMLCRLDGLKTMEV-----LNSPHSGINGLVASFVTLLQEENPS 325
Query: 347 TVSTVFRTADKLS 359
T+ RTA KL+
Sbjct: 326 RECTIVRTAGKLT 338
>gi|226480516|emb|CAX73355.1| hypothetical protein [Schistosoma japonicum]
Length = 303
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 209 DSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISL 268
+S+ K T ++LSS+Q LR NLL+ +KL+CT + E + K + I
Sbjct: 75 NSDQYKWKMTSSSLSSKQRFDDYLRLNLLVNCTRKLDCTCLILGECSNRVTVKYLLEIIE 134
Query: 269 GKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLAS 328
G+G + + D+R D+ +RPLRDF +KE+ + F +L + T DPL S
Sbjct: 135 GRGNYSSIQTSLMDERYKDVTIIRPLRDFLAKELTLFAHFMELESI------TPNDPLTS 188
Query: 329 ----------LQKAAESFVTDLQT-NFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAP 377
L++ + F+ LQ FPST T+ RT+ K+ L+ VN C C P
Sbjct: 189 IILKNPSINTLERLTQDFLASLQAGGFPSTTGTILRTSSKVVLE-NDTQVN--CSFCHYP 245
Query: 378 L------DTRADLASSSMGATRFSRYVSNAT 402
+ D LA+ SM ++S +SN +
Sbjct: 246 ICNTESSDDPDKLATESM---KYSFLLSNPS 273
>gi|355681752|gb|AER96824.1| cytoplasmic tRNA 2-thiolation protein 2 [Mustela putorius furo]
Length = 224
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 53/223 (23%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 2 CVKCKEGPPVVVIRAGDAFCRECFRAFYIHKFRAVLGKNRLIFPGEKVLLAWSGGPSSSS 61
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFT 181
++ + EG+ S KR+ F +Y+D+G+ S +R + ++ F +
Sbjct: 62 MVWQVLEGLSRDSAKRLRFVPGVVYVDEGAACGRSWEDRAKTLTDVRQILQTLGFPWHIV 121
Query: 182 CLEQ--ALEPDNMKLYTD----------VA--------------------------ELPL 203
LE+ AL P ++ VA E P
Sbjct: 122 SLEEVFALPPSVLRCSAQDPVGTVGTYKVAVDSFLQQQRTLAAEGLRGSPSSAQGEEQPS 181
Query: 204 EQFAKDSE-------------INKMFQTVTTLSSRQYLLQTLR 233
+ +DSE ++++F +V TL++++ LLQTLR
Sbjct: 182 QPCTQDSEDPVGPPPAAQTEALSQLFNSVKTLTAKEELLQTLR 224
>gi|118378925|ref|XP_001022635.1| hypothetical protein TTHERM_00727500 [Tetrahymena thermophila]
gi|89304402|gb|EAS02390.1| hypothetical protein TTHERM_00727500 [Tetrahymena thermophila
SB210]
Length = 525
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 146/332 (43%), Gaps = 47/332 (14%)
Query: 59 RADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGS 118
+ K+C +C + R +D CK C ++HKF+A L + +K LV SG
Sbjct: 89 KGKKICYKCKEQESQYKYR-QDFACKKCFESNIDHKFKANLKLKINLGRNEKCLVCVSGG 147
Query: 119 HSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDS 178
+S+AL L+ + S K++ F YID+ + + E++A N + M
Sbjct: 148 ANSLALAQLVSNALHNSMGKKMFFEAELFYIDEDILYK---KEKQAENLEKVNKMAEL-- 202
Query: 179 YFTCLEQALEPDNM-KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLL 237
L+ L + +Y D+ E E+ K + K F+ + S ++ L+ + L
Sbjct: 203 ----LKIKLTIVKLTDIYKDI-ESEAERENKLLSLLKQFKAIA--SCQEDLVSFFKTQLY 255
Query: 238 LQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL------ 291
L+ A + N K+ LA+KI + G+ A ++ F D+ + DI+
Sbjct: 256 LEYAFRNNFDKVLLGNCGQRLASKIFTLFTKGRAASSDNEIQFIDNVSYDILGRFFDLHN 315
Query: 292 --------------RPLRDFSSKEVIYY----NIFNDLS--PVHV-----PSLATLADPL 326
RP++D+ +KE++ Y I N L+ P ++ P+L
Sbjct: 316 EDNKVYSKKILGIGRPMKDYLNKEIMNYLHCMGILNLLTERPFYLCEQEKPNLKLPG--Y 373
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
+L + E+F+ ++Q NF ST T+ T++K+
Sbjct: 374 GNLDRIMENFIDNIQENFVSTTHTILHTSEKI 405
>gi|268558344|ref|XP_002637162.1| Hypothetical protein CBG09667 [Caenorhabditis briggsae]
Length = 348
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 133/290 (45%), Gaps = 23/290 (7%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDK--VLVAFSGSHSSMALLHLLQEGMQLSS 136
K YC+ C +Q + +KFR+AL K K+ + D LV + GS S LL+ + + ++ +
Sbjct: 31 KAWYCQECFIQMVRNKFRSALSKKKIYKEADARDTLVVYDGSPSGTFLLNQIDDALKQIT 90
Query: 137 HKRILFSVCAIYI----DDGSISQV--SISERKANNAQIATAMKYFDSYFT-CLEQALEP 189
+KR++ + + ++ I QV ++E K N + +F ++ CL EP
Sbjct: 91 YKRLMVKPTVLVLVSESEEPEIQQVIKRVAEIKKN---FLENVNWFIAHIAFCLYD--EP 145
Query: 190 DNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKI 249
+K E K + + + + + ++ L + L++ L + A+ L TK
Sbjct: 146 SELK------EFECNGIEKITAYKYLLASCSVPTYKKELERMLKEKCLQKLAESLKVTKC 199
Query: 250 FTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFN 309
+ DL + + LG+G + V ++ R D + +RPL D S +E+ YN
Sbjct: 200 MVTDDADDLGRLALDQLCLGRGGSLSSLVTVAEKR-NDFMIIRPLCDLSKREISIYNYLC 258
Query: 310 DLSPVHVPSLATLADPLASLQKAAESFVTDLQ-TNFPSTVSTVFRTADKL 358
+ H + S+Q ++F+ L+ F ST++TV TA K+
Sbjct: 259 KIDD-HYIQFSHTQSQEKSVQTLTDAFIRTLEDEKFYSTINTVLSTASKI 307
>gi|226711461|sp|A8X8I6.2|CTU2_CAEBR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
Length = 349
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 133/290 (45%), Gaps = 23/290 (7%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDK--VLVAFSGSHSSMALLHLLQEGMQLSS 136
K YC+ C +Q + +KFR+AL K K+ + D LV + GS S LL+ + + ++ +
Sbjct: 31 KAWYCQECFIQMVRNKFRSALSKKKIYKEADARDTLVVYDGSPSGTFLLNQIDDALKQIT 90
Query: 137 HKRILFSVCAIYI----DDGSISQV--SISERKANNAQIATAMKYFDSYFT-CLEQALEP 189
+KR++ + + ++ I QV ++E K N + +F ++ CL EP
Sbjct: 91 YKRLMVKPTVLVLVSESEEPEIQQVIKRVAEIKKN---FLENVNWFIAHIAFCLYD--EP 145
Query: 190 DNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKI 249
+K E K + + + + + ++ L + L++ L + A+ L TK
Sbjct: 146 SELK------EFECNGIEKITAYKYLLASCSVPTYKKELERMLKEKCLQKLAESLKVTKC 199
Query: 250 FTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFN 309
+ DL + + LG+G + V ++ R D + +RPL D S +E+ YN
Sbjct: 200 MVTDDADDLGRLALDQLCLGRGGSLSSLVTVAEKR-NDFMIIRPLCDLSKREISIYNYLC 258
Query: 310 DLSPVHVPSLATLADPLASLQKAAESFVTDLQ-TNFPSTVSTVFRTADKL 358
+ H + S+Q ++F+ L+ F ST++TV TA K+
Sbjct: 259 KIDD-HYIQFSHTQSQEKSVQTLTDAFIRTLEDEKFYSTINTVLSTASKI 307
>gi|147852315|emb|CAN82223.1| hypothetical protein VITISV_011871 [Vitis vinifera]
Length = 747
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 138/319 (43%), Gaps = 40/319 (12%)
Query: 63 LCPRCNTN-----NGEVVLRLKDI--YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF 115
LC +C N +G V + DI +C C L KF+ A+ + M+ P D VLVAF
Sbjct: 46 LCLKCKVNETLASSGTVSVD-GDIGRFCFDCFRGNLFGKFKLAVTSNAMISPTDNVLVAF 104
Query: 116 SGSHSSMALLHLLQEGMQLSSHKRI---------LFSVCAIYIDDGSISQVSISERKANN 166
SG SS L + E MQ + K +F V ++D+ ++S++ E
Sbjct: 105 SGGPSSRVALQFVHE-MQHKAQKNFDASRDRSLPVFGVGVAFVDESAVSRIPSDE----- 158
Query: 167 AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQ 226
A++ S + L P + E +D + ++ V ++ ++
Sbjct: 159 --FDKAIQDMKS----IVSNLAPPXKAFHVVPIESVYSSNGRD-RLEELLNAVKDVTGKE 211
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
LLQ LR L + A + TK+ + +A +I+ G+G +P D+ + D R
Sbjct: 212 DLLQHLRMLSLQKNAYENGYTKLLLGSCTSRIACHVISATVKGQGYSLPADIQYVDARW- 270
Query: 287 DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA------DPLASLQKAAESFVTDL 340
+I + PLRD ++E+ N+ L + S +L P + + SFVT L
Sbjct: 271 EIPVVLPLRDCLAQEL---NMLCRLDGFVIHSFGSLKTMEVLNSPHSGINGLVASFVTLL 327
Query: 341 QTNFPSTVSTVFRTADKLS 359
Q PS T+ RTA KL+
Sbjct: 328 QEENPSRECTIVRTAGKLT 346
>gi|145249932|ref|XP_001401305.1| cytoplasmic tRNA 2-thiolation protein 2 [Aspergillus niger CBS
513.88]
gi|226711436|sp|A2R475.1|CTU2_ASPNC RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|134081990|emb|CAK46675.1| unnamed protein product [Aspergillus niger]
Length = 366
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 30/344 (8%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHK-FRAALGKSKMMR-PQD---KVLVAFSGS 118
C C+ +LR + + C+ C +++LN K FR PQ K+L+ S
Sbjct: 10 CMNCHEAEPAFLLRERHV-CQECYIRFLNFKPFRRMERYRLRRNMPQTGPCKLLLPLSYG 68
Query: 119 HSSMALLHLLQ---EGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
SS LLH+L E ++ H F + + ++ +IS V E AQ +
Sbjct: 69 VSSTVLLHMLHRQLEALRSKKHGPAGFEILVLVVEPSTISPVPPHEEGFALAQQTFPLCS 128
Query: 176 FD--SYFTCLEQALEPDNMKLYTDVAELPLEQFAKDS------EINKMFQTVTTLSSRQY 227
F + + E L+PD ++ + A E F D+ +N+ +++TT +S+
Sbjct: 129 FTRLPFHSIFE--LDPDVHQIMSQYAG---EHFTDDTSLSDEERLNRFRRSITTATSKSD 183
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD 287
+ Q L L++ AKK+ C I ++ + LA K +AN++ G+G+ V V G
Sbjct: 184 VDQILLNKLVVAFAKKMECRGIVWGDSDSKLAAKTLANVAKGRGSAVTWQVCDGMSPFGL 243
Query: 288 IITLRPLRDFSSKEV-IYYNIFNDLSPVHV----PSLATLADPLASLQKAAESFVTDLQT 342
PLRD + E+ Y +F +L+ + V PS TL L S+ + +V+
Sbjct: 244 EFNF-PLRDVFTAEIRTYATLFPELAGIIVHDEPPSENTLTKNL-SIDELMIRYVSTQGE 301
Query: 343 NFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLAS 386
+P + V RTA KL TS+ C C A + T ++
Sbjct: 302 KYPGVMLNVTRTASKLQSSGTSIG-GLQCNFCGAFMTTNENITG 344
>gi|453087070|gb|EMF15111.1| hypothetical protein SEPMUDRAFT_59556 [Mycosphaerella populorum
SO2202]
Length = 360
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 148/342 (43%), Gaps = 33/342 (9%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKF--RAALGKSKMMRP--QDKVLVAFS 116
+ LC RC +V+R + C AC Y+ K R + + P + K+L+ S
Sbjct: 13 ETLCRRCQETEPAIVVR-NEPLCSACFSNYVQTKVVKRMESFRVRNAEPGNEQKLLLHLS 71
Query: 117 GSHSSMALLHLLQEGM--QLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK 174
S+ALLH+L + Q++ R + + +++ G + ++ A +K
Sbjct: 72 FDACSLALLHILSRHLKTQVAKTGRPGYKIMVLHVYQGPPDATGSN----DDCLAAVRVK 127
Query: 175 YFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDS---------EINKMFQTVTTLSSR 225
Y + + A+ +M +V+ L L Q A S ++++F + +S+
Sbjct: 128 YPEHEY----HAISIADMLALENVSTL-LSQTAAPSSGSDDAAHERLSQLFTAAKSATSQ 182
Query: 226 QYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRT 285
Q L Q L + L++Q AK+ +C I + T LA +++A + G+G +P V
Sbjct: 183 QDLKQLLMRQLIVQQAKQHHCRAIIWEHSTTRLAEQVLAETAKGRGFSLPWVVNDGASPH 242
Query: 286 GDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLAS-----LQKAAESFVTDL 340
G I PLR+ +KEV Y + L P S+ P S + + + +
Sbjct: 243 G-IPFYFPLREVLNKEVDAY--LSCLDPPLGISIQRATRPAVSTKNTTIDELMAQYFESV 299
Query: 341 QTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRA 382
+ +PS V+ V RT KLS V C LC PL+ +A
Sbjct: 300 EQEYPSIVANVVRTTGKLSSATAVAQVEQQCELCAMPLEGQA 341
>gi|119587182|gb|EAW66778.1| hypothetical protein LOC348180, isoform 1, isoform CRA_d [Homo
sapiens]
Length = 181
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 63/106 (59%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 28 CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSS 87
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI 169
++ + EG+ S KR+ F I++D+G+ S+ ER A++
Sbjct: 88 MVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEV 133
>gi|395332146|gb|EJF64525.1| hypothetical protein DICSQDRAFT_152807 [Dichomitus squalens
LYAD-421 SS1]
Length = 524
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 147/389 (37%), Gaps = 94/389 (24%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL---------GKSK-MMRPQDKVLV 113
C RC G +V+R +YCK C HKFR AL G K ++P +LV
Sbjct: 26 CVRCKDAIGNIVIR-HAVYCKYCFFPLTTHKFRRALEPNVNAKPDGPRKTALKPAGTLLV 84
Query: 114 AFSGSHSSMALLHLL--------------QEGMQLSSHKRILFSVCAIYI---------- 149
FSG S LL L+ + G H+R+ + Y+
Sbjct: 85 GFSGGLGSSVLLDLVYKCYVSLDKSTMPAEGGRDHPRHERVWKKITVCYVEVCDAFPGTP 144
Query: 150 -------------DDGSISQVSISER--KANNAQIATAMKYFDSYFTCLEQALEPDNMKL 194
D+ ++ + I + A +I M + D + ++AL
Sbjct: 145 DRTEDVTKFVSRYDELQLATLRIQDAFDPAWWEKIGGRMSFADIGVSLADEAL------- 197
Query: 195 YTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAET 254
+ L + + ++ T ++ +QTL + LLL +A + + +
Sbjct: 198 --FIGSLTQSHLDPLAALRAYLSSLPTPTAVHSAIQTLVRVLLLHSALHTGASHLILGTS 255
Query: 255 QTDLATKIIANISLGKGAHV---------PLDVGFS--------DDRTGD-----IITLR 292
T LA +I+ ++ G G ++ P D G + + R G + +R
Sbjct: 256 LTSLAISLISGVAQGSGFNIREETSEEWYP-DTGVTNVPEYWPDEGRKGKRLKRTVRVVR 314
Query: 293 PLRDFSSKEVIYYNIFNDLSPVHVPSLA--TLADPLA--SLQKAAESFVTDLQTNFPSTV 348
PLRD KE + ++ H+P + T P A + + F+ L+ ++PSTV
Sbjct: 315 PLRDIGMKECAAWAWWS-----HIPVVGKETWLWPGAKPGIGTLTKEFILGLEQDYPSTV 369
Query: 349 STVFRTADKLSLDLTSMNVNNTCLLCKAP 377
ST+ RT KL V C+LC P
Sbjct: 370 STIVRTCAKLQ---PKGEVEGKCILCGRP 395
>gi|189199104|ref|XP_001935889.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|226711141|sp|B2W6W8.1|CTU2_PYRTR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|187982988|gb|EDU48476.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 380
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 41/342 (11%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK-------FRAALGKSKMMRPQDKVL 112
+++ C RC ++ V++ + C C +Y++ K FR + Q +VL
Sbjct: 10 SNEPCRRCKASS--VLVVRSEPLCHDCFARYIHTKCIKRLETFRVNFTAEQ----QPRVL 63
Query: 113 VAFSGSHSSMALLHLL--QEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIA 170
V S SS+ LLH+L + Q S R F++ A+YI+D S + A +
Sbjct: 64 VPLSFGISSVTLLHVLDLHQRTQKSKTGRTGFNISAVYIEDPEQSIM------AEDLLDQ 117
Query: 171 TAMKYFDSYFTCLEQALEPDNMKLYTDVAEL----PLEQFAKDSE--INKMFQTVTTLSS 224
+Y + L D +L D A + P Q+A E + M ++T+ ++
Sbjct: 118 VREQYSGHQYASLPLH---DVFRLVQDDASIRSLVPETQYASTPEEKLVHMINSLTSATA 174
Query: 225 RQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR 284
R +L TL+ L+++ AK C I ++ T LA K ++ + G+G +P V SD
Sbjct: 175 RADVLSTLKTRLIVEHAKLTGCESILWGDSTTRLAQKTLSETAKGRGFSLPWQV--SDGP 232
Query: 285 TGDIITLR-PLRDFSSKEVIYYNIFNDL---SPVHVPSL----ATLADPLASLQKAAESF 336
+ + PLRD KE++ Y + + VH S+ A+ + ++ + +
Sbjct: 233 SPFGLNFHYPLRDVLKKELVSYMNMAETGLKTLVHETSIGATQASTSSKNTTIDDLMKQY 292
Query: 337 VTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
++ NFPS V+ V RTA +L +++ C LC P+
Sbjct: 293 FESVEDNFPSIVANVVRTASRLEAQPDALS-EPKCSLCSMPV 333
>gi|388578960|gb|EIM19291.1| hypothetical protein WALSEDRAFT_61550 [Wallemia sebi CBS 633.66]
Length = 447
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 159/370 (42%), Gaps = 28/370 (7%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKF-RAALGKSKMMRPQDKVLVAFSGSH 119
+K+C +C T + +R +YC+ C + + KF + L K + SG
Sbjct: 26 NKICLKCKTEAPVIQVR-HALYCRNCFIFTTSGKFLKWFLATFKTTDIYPAFYIGVSGGP 84
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCA------IYIDDGSISQVSISERKANNAQIATAM 173
SS LLH+LQ + K A IY++ ++ + + RK I +
Sbjct: 85 SSRYLLHVLQTQLTPRKGKGNFIRPGAAEKLVVIYVNHANVVPGAQNLRK----DIENMI 140
Query: 174 KYFDSYFTC---LEQALEPDNMKLYTDVAELPLEQFAK--DSEINKMFQTVTTLSSRQYL 228
K + + ++ A + + ++ LP + + S +F + SS +
Sbjct: 141 KGYPNAEIIEVDVDSAWKDSQSSISAQLSGLPGQPPSGTTSSSTADLFDSTLATSSLESH 200
Query: 229 LQTLRQNLLLQAAKKL--------NCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF 280
L L +L+L+ A+K +F A + T + K+++++S G+G +
Sbjct: 201 LSLLTHHLILREARKHADGLVGKDKELPLFLATSATRVTIKLLSSMSRGRGWSLGSGEVQ 260
Query: 281 SDDRTGDIITLRPLRDFSSKEVIYYNIF---NDLSPVHVPSLATLADPLASLQKAAESFV 337
+ + +PL + SSKE+ Y+N + +D PV + +T A P +S+ + E V
Sbjct: 261 PESSQFGMRIYQPLLNTSSKEIAYFNKYVVPDDSKPVVNRTFSTFAPPKSSIDRLTEELV 320
Query: 338 TDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRY 397
L+ FPSTVSTV +T +K+S + C LC P +A+ + + T+
Sbjct: 321 VSLERGFPSTVSTVAKTGNKISFAGEAKEGERLCTLCGWPARAKANDWKNGIAITKLDDK 380
Query: 398 VSNATREQLS 407
V + +Q S
Sbjct: 381 VESTESDQPS 390
>gi|326504804|dbj|BAK06693.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 139/314 (44%), Gaps = 26/314 (8%)
Query: 55 FSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVA 114
S S A C +C VV + C CL L KF+ A+ + M+RP D VLVA
Sbjct: 37 LSISGASASCGKCGGGAVVVVAGGVGL-CGECLRAQLFGKFKLAVTSNAMVRPTDSVLVA 95
Query: 115 FSGSHSSMALLHLLQE------GMQLSSHKRIL--FSVCAIYIDDGSISQVSISERKANN 166
FSG +S L + E G +S+ + L F+V ++D+ + +S+ E
Sbjct: 96 FSGGPASRVALQFIHEMRSKAIGSWDASNSQALPVFNVGVAFVDESVL--LSMPE----- 148
Query: 167 AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSE--INKMFQTVTTLSS 224
++ A + S + L + ++ DV E +KD E + ++ +T +
Sbjct: 149 CEVELATEDIKSIVSSLLPGDKAMHIASLDDV--FSSESNSKDGEDRLRELVGMITDDTG 206
Query: 225 RQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR 284
R+ LLQ LR L + A + TKI + +A +++ G+G +P D+ + D R
Sbjct: 207 REDLLQCLRMLSLQKIALENGYTKIMLGSCASTIACHVLSATVKGQGYSLPADIQYVDAR 266
Query: 285 TGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNF 344
++ + PLRD ++E+ F+ L + L P + SFV L+
Sbjct: 267 W-EVPVVLPLRDCLAQELSLLCEFDSLKTQQL-----LDRPCGGINGLIASFVARLREEN 320
Query: 345 PSTVSTVFRTADKL 358
PS T+ RTA KL
Sbjct: 321 PSREHTIVRTAQKL 334
>gi|356570474|ref|XP_003553411.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 2-like, partial [Glycine max]
Length = 389
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 173/402 (43%), Gaps = 68/402 (16%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS---MALLHLLQEGMQL---S 135
+C C L KFR+A+ + M+ P DKVLVAFSG SS + +H +QE Q +
Sbjct: 9 FCADCFKTNLFGKFRSAVTSNAMISPTDKVLVAFSGGPSSRVALQFVHDMQERAQRNFDA 68
Query: 136 SHKRIL--FSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMK 193
S R L F V ++I++ ++ + +E + ++ +
Sbjct: 69 SRDRSLPVFGVGVVFINESTVLPIPSNEMEEAVGVVSEVV------------------SS 110
Query: 194 LYTDVAEL---PLE-QFAKDSEINK-MFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK 248
L T EL P++ ++ DS+ K V + R+ +L LR L + A + +
Sbjct: 111 LATPRKELRIVPIDTAYSSDSDDGKERIAKVXDPTGREDVLLCLRMLALQKVASEFGYNR 170
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF 308
I + +A +I+ G+G +P D+ + D R ++ + PLRD ++E+ N+
Sbjct: 171 IILGSCISRIACHVISATVKGQGYSLPADIQYVDAR-WEVPVVLPLRDCFAQEI---NML 226
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS--------- 359
L + L+T D +S+ SFV LQ PS S++ RTA KL+
Sbjct: 227 CRLDGLKTVKLST--DLCSSINGLVSSFVALLQEENPSRESSIVRTAGKLTPFQFNRIPE 284
Query: 360 -----LDLT--------------SMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSN 400
+ LT S++ + C LC +PLD + S++ + R S N
Sbjct: 285 IIDSNVPLTTRRCQKRYNLKSNESVSSESFCPLCNSPLDKSEIVDWSNIDSHRSSDIFYN 344
Query: 401 ATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNG 442
I+ S+S + D Q+V S+ P+++ NG
Sbjct: 345 TCCSSCRFQILPSDS-TTMEQFYMDFPQSVVSR--PKQANNG 383
>gi|406867401|gb|EKD20439.1| hypothetical protein MBM_01121 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 381
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 148/346 (42%), Gaps = 33/346 (9%)
Query: 54 VFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQD---K 110
V S A LC RCN G +R + + C C QY+ K + KM ++ K
Sbjct: 8 VASNGVASPLCKRCNEEPGTQQIRSETV-CSKCFTQYVATKVIKRMETYKMRGSRNAPKK 66
Query: 111 VLVAFSGSHSSMALLHLLQEGMQLSSHK--RILFSVCAIYIDDGSISQVSISERKANNAQ 168
+L S SS +LLH+L + +Q + R + + ++I + ++RK A
Sbjct: 67 LLFPLSFGPSSASLLHILDQHLQGQYERMNRAAYKLHIVHI----YLHLDDADRKDCVAL 122
Query: 169 IATAMKYF--DSYFTC-LEQALEPDNMKLYTDVAELPLE---QFAKDSEINKMFQTVTTL 222
+ F +YF+ LE AL+ DN+ P E Q + + ++ +
Sbjct: 123 LEKYKARFPRHTYFSLGLEDALQLDNIDWKALGMSAPAEVVTQKLGTERLQALIGSMPSA 182
Query: 223 SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSD 282
+SR+ + TL LL++ AK+ +C I ++ T LA K + + G+G +P V SD
Sbjct: 183 TSRKDIATTLLTRLLVEVAKRNSCESILFGDSTTRLAEKTLTETAKGRGFSLPWQV--SD 240
Query: 283 DRTGDIITLR-PLRDFSSKEVIYYNIFNDLSPVHVPSLATLAD---------PLASLQKA 332
T + P RD KE++ F L+ + L + L ++
Sbjct: 241 GMTSYGVGFNYPARDLLKKELV---TFTSLTTAPLTDLILYQNSSSEISASSKLTTIDDL 297
Query: 333 AESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
+ ++ N+PS V+ V RT+ KL S V+ C LC P+
Sbjct: 298 MIQYFESVEQNYPSIVANVVRTSSKLK--PRSGEVSAGCGLCGLPV 341
>gi|396476451|ref|XP_003840028.1| hypothetical protein LEMA_P108140.1 [Leptosphaeria maculans JN3]
gi|312216599|emb|CBX96549.1| hypothetical protein LEMA_P108140.1 [Leptosphaeria maculans JN3]
Length = 468
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 148/345 (42%), Gaps = 49/345 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHK-------FRAALGKSKMMRPQDKVLVAFS 116
C RC+ + +V+R + + C C +Y++ K FR + PQ +VLV S
Sbjct: 14 CRRCHDSPSVLVVRSEPL-CHECFARYVHTKCIKRLESFRVNFSATA---PQRRVLVPLS 69
Query: 117 GSHSSMALLHLLQEGM--QLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK 174
SS+ALLH+L + Q S R FS+ A++I+D S + +A++ +
Sbjct: 70 FGVSSIALLHILHLHLTTQKSKTGRTGFSIHAVHIED------SYQDTQAHDLLRKVQEQ 123
Query: 175 YFDSYFTCLE-------QALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQY 227
Y D FT L +++P L + + + + ++T+ ++R
Sbjct: 124 YPDCQFTSLPLHDVFSINSVDPALQALLPEFIAGEDADLSPQQSLTRFMASLTSAAARAD 183
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD 287
+L LR L+++ AK C + ++ T LA K ++ + G+G +P V G
Sbjct: 184 VLSILRTRLIIEHAKATGCQSVLWGDSTTKLAEKTLSETAKGRGYSLPWQVTDGPSPFG- 242
Query: 288 IITLRPLRDFSSKEVI-YYNIFNDLSPVHVPSLATL--ADPLASLQKAAES--------- 335
+ PLRD KE++ Y N+ P LA L + + Q + S
Sbjct: 243 LNVHYPLRDVLKKELVSYINMAQ-------PELAALVQSSSYGATQASTSSKNTTIDDLM 295
Query: 336 --FVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
+ ++ NFPS VS V RT KL + C LCK P+
Sbjct: 296 KQYFESVEENFPSIVSNVVRTTSKLQVP-AGAPTEACCSLCKMPV 339
>gi|195634829|gb|ACG36883.1| hypothetical protein [Zea mays]
Length = 462
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 145/339 (42%), Gaps = 35/339 (10%)
Query: 35 CSKEQVLNGDEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK 94
CS G E+ S + A C +C+ V + C C +L K
Sbjct: 15 CSSSSSAGGQEDALAESMGRLSTASAAAACGKCDGGGAAVAVAGGVGMCAGCFRTHLFGK 74
Query: 95 FRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQ---------LSSHKRILFSVC 145
F+ ++ + M+RP D VL+AFSG +S L + E MQ +S +FS+
Sbjct: 75 FKLSVTSNAMVRPTDAVLLAFSGGPASRVALQFIHE-MQSKAIQSWEASNSQALPVFSLG 133
Query: 146 AIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQ 205
+++D+ S+ S+ +I A++ S + L P + +++ PLE+
Sbjct: 134 VVFVDERSVLSASLP-----GHEIQAAIEDIRSVVS----GLSPGDKRVHI----APLEE 180
Query: 206 F---AKDSEINKMFQTVTTLS---SRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLA 259
D + ++ + V +S R ++ LR L + A + TKI + +A
Sbjct: 181 VFSSGSDDKAARLKEVVGVISDETGRDDFVRRLRMLSLQKVALENGYTKIMLGTCASGIA 240
Query: 260 TKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSL 319
+++ G+G +P DV + D R ++ + PL D ++E+ N+ ++ + L
Sbjct: 241 CHVLSATVKGQGYALPADVQYVDTRW-EVPVVLPLHDCLAQEL---NLLCEIDSLKTQQL 296
Query: 320 ATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
L P + + SFV+ L+ S T+ RTA KL
Sbjct: 297 --LDRPCSGINGLVSSFVSRLREENSSREHTILRTAQKL 333
>gi|213403560|ref|XP_002172552.1| cytosolic thiouridylase subunit Ctu2 [Schizosaccharomyces japonicus
yFS275]
gi|212000599|gb|EEB06259.1| cytosolic thiouridylase subunit Ctu2 [Schizosaccharomyces japonicus
yFS275]
Length = 375
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 47/336 (13%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQ------DKVLVAFS 116
LC +C V+ D +C+AC ++ + +K R +++RP K LV S
Sbjct: 9 LCKKCKAK--AVIEARSDAFCEACYIRSIENKIRRQF---ELLRPNLVDKCSKKALVCVS 63
Query: 117 GSHSSMALLHLLQEGMQLSSHK----RILFS-VCAIY-------IDDGSISQVSISERKA 164
G +SMA+L + LSS++ R +F + A++ +++ + + I ++
Sbjct: 64 GGLNSMAMLETV---YYLSSYREDNYRPMFGDLIAVHLQLPTSTVEEEDMIRTVIKQKYP 120
Query: 165 NNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSS 224
A + + + S T + L + V E P A+ + N F V++ +S
Sbjct: 121 KCAYVYVSEHEYMSQCTYVN--------ALGSQVRE-PAVSTAETEQTN--FLNVSSTTS 169
Query: 225 RQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR 284
RQ LL +R +LLQ A + +C + ++ + LA K + ++ G+G +P G
Sbjct: 170 RQDLLHRMRDRVLLQLAHENHCDTLVYGDSASTLAAKTLELVAEGRGHAIPASTGVCTRP 229
Query: 285 --TGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQT 342
D+ LRPLR+ +E+ Y L V L L ++ ++++ +L
Sbjct: 230 AVAPDVAILRPLREVLEQELRSYMGMKGLQFVS----RELDSRLTTMFDVSKNYFLNLGE 285
Query: 343 NFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
FPS VST+ RT+ KLS + C LC P+
Sbjct: 286 QFPSLVSTIVRTSGKLSAPQDGV----CCRLCLLPM 317
>gi|330925187|ref|XP_003300947.1| hypothetical protein PTT_12331 [Pyrenophora teres f. teres 0-1]
gi|311324673|gb|EFQ90956.1| hypothetical protein PTT_12331 [Pyrenophora teres f. teres 0-1]
Length = 356
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 128/285 (44%), Gaps = 24/285 (8%)
Query: 108 QDKVLVAFSGSHSSMALLHLL--QEGMQLSSHKRILFSVCAIYIDDGSIS----QVSISE 161
Q +VLV S SS+ LLH+L + Q S R F++ A+YI+D S + +
Sbjct: 35 QPRVLVPLSFGVSSVTLLHVLDLHQRTQKSKTGRTGFNISAVYIEDPEQSVRAEDLLVQV 94
Query: 162 RKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTT 221
RK ++ D F ++ ++ T A P EQF M ++T+
Sbjct: 95 RKQYPGHQYASLPLHD-VFRLVQDDASMRSLVPETQRASTPQEQFVH------MINSLTS 147
Query: 222 LSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFS 281
++R +L TLR L+++ AK C I ++ T LA K ++ + G+G +P V S
Sbjct: 148 ATARADVLSTLRTRLIVEHAKSTGCESILWGDSTTRLAQKTLSETAKGRGFSLPWQV--S 205
Query: 282 DDRTGDIITLR-PLRDFSSKEVI-YYNIFNDLSPVHVPSLATLADPLASLQKAA------ 333
D + + PLRD KE++ Y N+ V +T A ++ K
Sbjct: 206 DGPSPFGLNFHYPLRDVLKKELVSYINMAETELKTLVHETSTGATQASTSSKNTTIDDLM 265
Query: 334 ESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
+ + ++ NFPS V+ V RTA +L +++ C LC P+
Sbjct: 266 KQYFESVEENFPSIVANVVRTASRLEAQPDTLS-EPKCNLCSMPV 309
>gi|402224617|gb|EJU04679.1| hypothetical protein DACRYDRAFT_20334 [Dacryopinax sp. DJM-731 SS1]
Length = 475
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 146/337 (43%), Gaps = 44/337 (13%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKS----------KMMRPQDK 110
D+ C +C ++ G +V++ +YC +CL L KFR AL S P
Sbjct: 22 DQTCIKCKSHRGNLVIK-HAVYCFSCLPAMLIRKFRRALSASLDPAAPPRGTPSRTPPPD 80
Query: 111 VLVAFSGSHSSMALLHLLQ-----EGMQLSSHKRILFSVCAIYIDDGSISQVSISE---- 161
V++A SG SS LL ++ EG +R + SV A+Y+D + S+ E
Sbjct: 81 VVLALSGGPSSTVLLDMVWKCFSVEGSGRKDERRQVGSVRAVYVDWSCLGGKSVVESLRE 140
Query: 162 ---RKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAE----LPLEQFAKDSE--- 211
R + FD+ +T P + L ++ LP A S+
Sbjct: 141 ACQRYGIELTMVMGEAAFDAAWTSAVGMPRPTSELLVNQHSDRLPFLPSPMGAGPSDPIA 200
Query: 212 -INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK 270
+ ++ T S+ +L+TL + L+L L+C+ + L+ ++ N++ G
Sbjct: 201 TLRAHLASLPTPSAIPAMLRTLTRLLILNTTCALSCSVLMLGTCLPRLSVDLLENVAYGG 260
Query: 271 GAHVPLDVGFSDDRT-----GDIITLRPLRDFSSKEVIYYNIFNDLS-PVHV---PSLAT 321
G +G + + G++ +RPLRD+S KE+ ++ L P V P
Sbjct: 261 G----FSLGSEREESVSLPLGEVHVIRPLRDWSLKELGWWLHSRSLPVPRGVDGKPDRLL 316
Query: 322 LADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
+L K E FV L+ ++PSTVST+ +TA K+
Sbjct: 317 APSGGKTLSKLTEDFVLGLERDYPSTVSTISKTATKV 353
>gi|226711457|sp|A5DAK5.2|CTU2_PICGU RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|190344524|gb|EDK36212.2| hypothetical protein PGUG_00310 [Meyerozyma guilliermondii ATCC
6260]
Length = 420
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 157/343 (45%), Gaps = 49/343 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALG------KSKMMRPQDKVLVAFSG 117
C RC+T + V+L ++ YC C ++++ K R ++ K K + +VL+A SG
Sbjct: 14 CQRCSTKDA-VLLARRENYCGDCFIRFIRGKQRRSMQDEAYKVKYKTVENPHRVLLALSG 72
Query: 118 SHSSMALL----HLLQEGMQLSSHK-RILFSVCAIYID-------DGSISQVSISERKAN 165
SS+ LL LLQE Q H R F++ + +D D S + ISE K+
Sbjct: 73 GSSSLVLLDAVASLLQE--QAGQHGGRQGFALTVVNVDERERLKLDKSFQDI-ISELKSR 129
Query: 166 NAQIATAMKYFDSYFTCLEQALEPD-----NMKLYTDVAE--LPLEQFAKDSEINKMFQT 218
+ D F L+ + D ++K+ +D + +PL K + IN + +
Sbjct: 130 YLPV-------DIDFVSLDYDMYVDGRLLHHIKVASDFSSYSIPLN---KGTNINDILKG 179
Query: 219 VTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV 278
+ SS + LL + LLL+ A C + + T LA +++A G+G+ + V
Sbjct: 180 CNSKSSEEDLLSIILNELLLKTAITHQCGTLLYGHSMTRLADEVLALTIKGRGSTIHSSV 239
Query: 279 -GFSDDRTGDIITLR-PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK----- 331
+++ +G I ++ PLRD E+ Y L V + S T+ DP+ + K
Sbjct: 240 LDHTEEISGQTINVKYPLRDVLMGEIEAYCKLAKLDSVVMSS--TIPDPVINKNKTVRGL 297
Query: 332 AAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLC 374
A+ F T + ST STV RTA KL+ T + TC +C
Sbjct: 298 TAQYFRQLDATGYSSTASTVVRTAAKLAAP-TVGTKSGTCKVC 339
>gi|390595492|gb|EIN04897.1| hypothetical protein PUNSTDRAFT_107745 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 553
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 167/446 (37%), Gaps = 96/446 (21%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL----------GKSKMMRPQDKV 111
K+C +C + G V R +YCK C + ++ +KF AL + K + P +
Sbjct: 25 KICVKCKSKPGNAVFR-HAVYCKDCFVPHVWYKFGKALEPYINPGPHGPRKKSLNPTGNL 83
Query: 112 LVAFSGSHSSMALLHLLQE--------------------GMQLSSHKRILFSVCAIYIDD 151
+ +SG S LL L+ G + H R+ ++D
Sbjct: 84 CIGYSGGMGSTVLLDLVHRCYFAGRDAADDAEGEIGADGGARHPRHGRVWKHATVCFVDT 143
Query: 152 GSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNM-KLYTDVAE---------- 200
G+ V+ + + + +A F+ LE A +P ++ D+
Sbjct: 144 GAAYGVA-PDFQPQIKSVLSAYPEFEFIPISLEDAFDPAWWNSVHGDIPHNDLGIDINDE 202
Query: 201 ----LPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQT 256
+P + +N ++ T ++R ++ TL + LLL A + + + T
Sbjct: 203 ALPCVPTSSGSPRDRLNVFLNSMPTPTARMAMVSTLVRILLLYTAHSRGSSHLLLGNSST 262
Query: 257 DLATKIIANISLGKGAHV----------------PLD----------VGFSDDR------ 284
L+ +I+ I+ G G + P D G R
Sbjct: 263 SLSIGLISGIAQGGGFAINAELYEEWEPSEIVAKPQDSSVNVEGEHVAGAGHRRKARATW 322
Query: 285 TGDIITLRPLRDFSSKEVIYYNIFNDLSPV---HVPSLATLADPLASLQKA----AESFV 337
TG + +RPL D S KE Y+ + +L+ + +P + +++ K+ F+
Sbjct: 323 TGSVRMVRPLSDISMKECGMYSWWRNLNVLISDDIP-MGRFVHEGSNVNKSIGGLTRDFI 381
Query: 338 TDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFS-R 396
L+ ++PSTVST+ RT KL+ + C+ + T D + R S R
Sbjct: 382 IGLERDYPSTVSTIARTCGKLAPKTQPGTLYRCCICERLSPPTVQDWKA------RISIR 435
Query: 397 YVSNATREQLS--HVIISSESPDHAS 420
+SN R S H +P +AS
Sbjct: 436 DLSNGKRSSRSSVHPAPGHSTPGNAS 461
>gi|357628243|gb|EHJ77633.1| cytoplasmic tRNA 2-thiolation protein 2 [Danaus plexippus]
Length = 174
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 27/148 (18%)
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEV-IYYNIFNDLSPVHVPSLATLADPLASLQKAAES 335
D GF+D+R G++ LRP+RD +++E+ IY NI ++V +D SLQ A
Sbjct: 3 DKGFADNRDGNVEILRPMRDITNEEIDIYLNI----KQMYVD--PKDSDQEISLQAAIRD 56
Query: 336 FVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNT---CLLCKAPLDTRADLASSSMGAT 392
FV DLQ N+PST+STV +TADKL S+N NN C +C++ ++ + D +++ AT
Sbjct: 57 FVLDLQENYPSTISTVCKTADKLG----SVNGNNNIKKCHVCQSTINFK-DSKLTAVEAT 111
Query: 393 RFSRYVSNATREQLSHVIISSESPDHAS 420
FSR VS S +SP+ AS
Sbjct: 112 IFSRIVS------------SEKSPESAS 127
>gi|440632422|gb|ELR02341.1| hypothetical protein GMDG_05408 [Geomyces destructans 20631-21]
Length = 382
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 150/342 (43%), Gaps = 28/342 (8%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQD---KVLVAFS 116
A +C RCN + +R + + C C Y+N K L K Q + L+ S
Sbjct: 15 AVSICKRCNKDEATTSIRSEPV-CLQCFTYYVNTKAIKRLETYKDRNRQSEAKRYLLPLS 73
Query: 117 GSHSSMALLHLLQEGMQLSSHK--RILFSVCAIYID----DGSISQVSISERKANNAQIA 170
SS +LLH+L E ++ S + R + + ++D D + S+ S KA +
Sbjct: 74 FGASSTSLLHILDEQLRKQSERMGRTSYELVIAHVDLEFEDEAASKKVRSLWKAVQDRFP 133
Query: 171 TAMKYFDSYFTCLE-QALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLL 229
S L+ ++++ ++ L D +Q K + + ++++T +SR +
Sbjct: 134 KHTYVEVSIADALDIKSIDWPSLGLAVD------KQLPKKERLANLLKSISTATSRSDIA 187
Query: 230 QTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV--GFSDDRTGD 287
TL LL+ A+K +C I ++ T LA K + + G+G +P V G S R +
Sbjct: 188 STLLARLLVSVAEKNSCGSILFGDSTTRLAEKTLTETAKGRGFSLPWQVSDGTSPFR-DN 246
Query: 288 IITLRPLRDFSSKEVIYYN-----IFNDLS-PVHVPSLATLADPLASLQKAAESFVTDLQ 341
+ P+RD KE++ + + D+ PV+ S + + ++ + ++
Sbjct: 247 LFFNYPMRDLLKKELVAFTKLTSPLLADIVIPVNTKSALSASSKSTTIDDLMTQYFESVE 306
Query: 342 TNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRAD 383
N+PS V+ V RT+ KL+ +N C LC P+ D
Sbjct: 307 ENYPSIVANVVRTSSKLT--APEVNGGAECTLCGIPVAEGTD 346
>gi|119587181|gb|EAW66777.1| hypothetical protein LOC348180, isoform 1, isoform CRA_c [Homo
sapiens]
Length = 183
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 64/112 (57%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 28 CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSS 87
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
++ + EG+ S KR+ F I++D+ + ++++ R A + K+
Sbjct: 88 MVWQVLEGLSQDSAKRLRFVAGVIFVDERTPGVLTVALRSAAREKPLPKGKW 139
>gi|357161843|ref|XP_003579221.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like
[Brachypodium distachyon]
Length = 462
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 23/284 (8%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLS------- 135
C CL +L KF+ A+ + M+RP D VL+AFSG +S L + E +
Sbjct: 64 CGECLRAHLFGKFKLAVTSNAMVRPTDFVLLAFSGGPASRVALQFIHEMRSKAIESWDAS 123
Query: 136 -SHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKL 194
S +F + A ++D+ SI K + ++ A++ S + L A + ++
Sbjct: 124 NSQALPVFGMGAAFVDE------SILSSKPRH-EVELAIEDIKSIVSSLLPADKAMHIAP 176
Query: 195 YTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAET 254
DV E + + ++ V + R+ L+ LR L + A + TKI
Sbjct: 177 LEDV--FSTESVDGEGRLRELVGMVDDDTGREDFLRCLRMLALQKIALENGYTKIMLGSC 234
Query: 255 QTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPV 314
+ +A +++ G+G +P DV + D R ++ + PLRD ++E+ + L
Sbjct: 235 ASAIACHVLSATVKGQGYSLPADVQYVDTRW-EVPVVIPLRDCLAQELTLLCELDRLK-- 291
Query: 315 HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
+L L P +S+ SFV L+ PS T+ RTA KL
Sbjct: 292 ---TLQLLDKPCSSINSLVASFVARLREENPSREHTIVRTAQKL 332
>gi|226505510|ref|NP_001145697.1| uncharacterized protein LOC100279201 [Zea mays]
gi|219884057|gb|ACL52403.1| unknown [Zea mays]
gi|414877867|tpg|DAA54998.1| TPA: hypothetical protein ZEAMMB73_001329 [Zea mays]
Length = 460
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 142/335 (42%), Gaps = 27/335 (8%)
Query: 35 CSKEQVLNGDEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK 94
CS G E+ S + A C +C+ V + C C +L K
Sbjct: 13 CSSSSSAGGQEDALVESMGRLSTASAAAACGKCDGGGAAVAVAGGVGMCAGCFRAHLFGK 72
Query: 95 FRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQ---------LSSHKRILFSVC 145
F+ ++ + M+RP D VL+AFSG +S L + E MQ +S +FS+
Sbjct: 73 FKLSVTSNAMVRPTDAVLLAFSGGPASRVALQFIHE-MQSKAIQSWEASNSQALPVFSLG 131
Query: 146 AIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQ 205
++D+ S+ S+ +I A++ S + L P + +++ E
Sbjct: 132 VAFVDERSVISASLP-----GHEIQAAIEDIRSVVS----GLSPGDKRVHIASLEEVFSS 182
Query: 206 FAKD--SEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKII 263
+ D + + ++ ++ + R ++ LR L + A + TKI + +A ++
Sbjct: 183 GSDDKAARLKEVVGVISDETGRDDFVRRLRMLSLQKVALENRYTKIMLGTCASGIACHVL 242
Query: 264 ANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA 323
+ G+G +P DV + D R ++ + PL D ++E+ N+ ++ + L L
Sbjct: 243 SATVKGQGYALPADVQYVDTRW-EVPVVLPLHDCLAQEL---NLLCEIDSLKTQQL--LD 296
Query: 324 DPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
P + + SFV+ L+ S T+ RTA KL
Sbjct: 297 RPCSGINGLVSSFVSRLREENSSREHTILRTAQKL 331
>gi|358374801|dbj|GAA91390.1| hypothetical protein AKAW_09504 [Aspergillus kawachii IFO 4308]
Length = 366
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 154/344 (44%), Gaps = 31/344 (9%)
Query: 66 RC-NTNNGEVVLRLKDIY-CKACLLQYLNHK-FRAALGKSKMMR-PQD---KVLVAFSGS 118
RC N + E L++ + C+ C +++LN K FR PQ K+L+ S
Sbjct: 9 RCMNCHEAEPAFTLRERFVCQECYIRFLNFKPFRRMERYRLRRNMPQTGPCKLLLPLSYG 68
Query: 119 HSSMALLHLLQEGMQL---SSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
SS LLH+L + +++ H F + + ++ +IS V E AQ +
Sbjct: 69 VSSTVLLHMLHQQLEVLRSKKHGPAGFEILVLVVEPSTISPVPPHEEGFALAQQTFPLCS 128
Query: 176 FD--SYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEIN------KMFQTVTTLSSRQY 227
F + + E L+PD ++ + A E F D+ ++ + +++++ +S+
Sbjct: 129 FTRLPFHSIFE--LDPDVHQIMSQYAG---ENFTDDTSLSDEERLTRFRRSISSATSKSD 183
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD 287
+ Q L L++ AKK+ C I ++ + LA K +AN++ G+G+ V V G
Sbjct: 184 VDQILLNKLVVAFAKKMECRGIVWGDSDSKLAAKTLANVAKGRGSAVTWQVCDGMSPFGL 243
Query: 288 IITLRPLRDFSSKEV-IYYNIFNDLSPVHV----PSLATLADPLASLQKAAESFVTDLQT 342
PLRD + E+ Y +F +L+ + V PS TL L S+ + +V+
Sbjct: 244 EFNF-PLRDVFTAEIRTYATLFPELAGIIVHDEPPSENTLTKNL-SIDELMIRYVSTQGA 301
Query: 343 NFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLAS 386
+P + V RTA KL TS+ C C A + T ++
Sbjct: 302 KYPGVMLNVTRTASKLQSSGTSIG-GLQCDFCGAFMTTNENITG 344
>gi|398407165|ref|XP_003855048.1| hypothetical protein MYCGRDRAFT_55599 [Zymoseptoria tritici IPO323]
gi|339474932|gb|EGP90024.1| hypothetical protein MYCGRDRAFT_55599 [Zymoseptoria tritici IPO323]
Length = 273
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 111 VLVAFSGSHSSMALLHLLQEGMQLSSHK--RILFSVCAIYIDDGSIS----QVSISERKA 164
VL+ S + SS+ LLH+L + +Q + K R F +C ++I G+ + + + KA
Sbjct: 2 VLLPLSYTASSVTLLHVLSQHLQGQTEKTGRTGFKLCVLHILGGNSANEDDEAPFDDLKA 61
Query: 165 NNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSS 224
Q D + L +AL A D + + + +S
Sbjct: 62 RYPQ-------HDYHTVRLSEAL-------------------ASDDSLRSLLLKAPSATS 95
Query: 225 RQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR 284
RQ + QTL+Q L + AK C + + T LA + I+ + G+G +P V D
Sbjct: 96 RQDIEQTLKQRLTISFAKSHACDAVIWDHSATKLAERTISETAKGRGISLPWIVADGDSL 155
Query: 285 TGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATL-ADPLASLQKA-----AESFVT 338
G I PLR+ +KE+ Y F D P +T+ P+ S + E +
Sbjct: 156 HG-IPFYHPLRELLNKELKSYVEFAD--PPFDARFSTVDTKPIVSTKNTTIDDLVEQYFE 212
Query: 339 DLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRA 382
++ ++PS V+ V RT KL + ++ C LC PL RA
Sbjct: 213 SVEQDYPSIVANVVRTTGKLP--VKAIEQAEQCELCCTPLQDRA 254
>gi|407922562|gb|EKG15659.1| Thiouridylase cytoplasmic subunit 2 [Macrophomina phaseolina MS6]
Length = 484
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 162/347 (46%), Gaps = 39/347 (11%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKF------RAALGKSKMMRPQDKVLV 113
A +LC RC + +++R + + C C +Y+N K A K++ + K+L+
Sbjct: 113 ATRLCQRCRVSESCLIVRSEPL-CSDCFAKYVNTKAIKRMESYAYYVKNRSADEERKLLL 171
Query: 114 AFSGSHSSMALLHLLQEGMQLSSHK--RILFSVCAIYIDDGSISQVSISE-------RKA 164
S SS+ LL+LL E ++ + K R +++ ++ID ++ ++ E R+A
Sbjct: 172 PVSFGVSSVTLLYLLDEHLRRQTAKTGRTGYALHILHIDTSAV-EMDTPEAGRLDRLREA 230
Query: 165 NNAQIATAMKYFDSYFTC-LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLS 223
A ++ D + E+AL+ D + Q ++ ++ ++ + +
Sbjct: 231 FPAHEYSSAPLADVFDDADAEEALQGVPEAATVDTGGMETSQ----QKLERLIVSLPSAT 286
Query: 224 SRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDD 283
SR +++ L+ L+++ A++ +C + +T T +A K +A + G+G +P V SD
Sbjct: 287 SRADVVRILKNRLIVKFAQRHDCKGVLWGDTTTKIAEKTLAETAKGRGFSLPWQV--SDG 344
Query: 284 RTGDIITLR-PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDL-- 340
+ IT PLRD KE++ + DL+ + SL + A + + DL
Sbjct: 345 MSPFGITFNYPLRDLLKKELVAHA---DLTSPPLTSLIQVQRHTQVSASAKNTTIDDLMK 401
Query: 341 ------QTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTR 381
+ ++PS V+ V RT+ KL T+ ++ C LC P++ R
Sbjct: 402 QYFESVEQDYPSIVANVVRTSSKLEPAPTT---DDRCRLCDMPVEGR 445
>gi|350639694|gb|EHA28048.1| hypothetical protein ASPNIDRAFT_124843 [Aspergillus niger ATCC
1015]
Length = 346
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 143/324 (44%), Gaps = 29/324 (8%)
Query: 84 KACLLQYLNHK-FRAALGKSKMMR-PQD---KVLVAFSGSHSSMALLHLLQ---EGMQLS 135
+ C +++LN K FR PQ K+L+ S SS LLH+L E ++
Sbjct: 9 RECYIRFLNFKPFRRMERYRLRRNMPQTGPCKLLLPLSYGVSSTVLLHMLHRQLEALRSK 68
Query: 136 SHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFD--SYFTCLEQALEPDNMK 193
H F + + ++ +IS V E AQ + F + + E L+PD +
Sbjct: 69 KHGPAGFEILVLVVEPSTISPVPPHEEGFALAQQTFPLCSFTRLPFHSIFE--LDPDVHQ 126
Query: 194 LYTDVAELPLEQFAKDS------EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
+ + A E F D+ +N+ +++TT +S+ + Q L L++ AKK+ C
Sbjct: 127 IMSQYAG---EHFTDDTSLSDEERLNRFRRSITTATSKSDVDQILLNKLVVAFAKKMECR 183
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEV-IYYN 306
I ++ + LA K +AN++ G+G+ V V G PLRD + E+ Y
Sbjct: 184 GIVWGDSDSKLAAKTLANVAKGRGSAVTWQVCDGMSPFGLEFNF-PLRDVFTAEIRTYAT 242
Query: 307 IFNDLSPVHV----PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDL 362
+F +L+ + V PS TL L S+ + +V+ +P + V RTA KL
Sbjct: 243 LFPELAGIIVHDEPPSENTLTKNL-SIDELMIRYVSTQGEKYPGVMLNVTRTASKLQSSG 301
Query: 363 TSMNVNNTCLLCKAPLDTRADLAS 386
TS+ C C A + T ++
Sbjct: 302 TSIG-GLQCNFCGAFMTTNENITG 324
>gi|358054415|dbj|GAA99341.1| hypothetical protein E5Q_06036 [Mixia osmundae IAM 14324]
Length = 369
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 146/365 (40%), Gaps = 72/365 (19%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDK-------VLVA 114
K C +C+ ++V L C ACL + K R +L + + R + + +A
Sbjct: 24 KTCTKCSIEPAQIV-TLAGSLCSACLKASVTTKLRTSLHRLEAPRRLGRADKSPFSLAIA 82
Query: 115 FSGSHSSMALLHLLQEGM----QLSSHKR-----ILFSVC-AIYIDDGSISQVSISERKA 164
FSG +S LL L++ + + H R LF+ IY+ GS
Sbjct: 83 FSGGPASRLLLELIRPHVYTVEERPLHYRGPPSHALFARAQIIYVSSGS---------AV 133
Query: 165 NNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSS 224
+ Q+ T FD F + LP+E ++ S+
Sbjct: 134 IDDQVKTVANDFDYPFCTVT----------------LPVEAV-------ELAANALDPSA 170
Query: 225 RQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKG--------AHVPL 276
+ L + L ++L+ + A + T + ET T +A + IA +S+G G HVPL
Sbjct: 171 KMTLQKNLSRSLITRTAHEQGVTHLMMGETSTGVAIRTIAGMSVGAGFNLGEQVATHVPL 230
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLA----SLQKA 332
F+D + +RPL SS+EV + L + VP+ T+A +
Sbjct: 231 ---FNDK----LQLVRPLAHVSSREVAFLVKQLGLRTIFVPNDLTMAKAKGKKEMGIDGT 283
Query: 333 AESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGAT 392
E FV L+ FP+T S V RTA KLSL + C +C P D A + +
Sbjct: 284 VEEFVLGLEQQFPATSSVVGRTAAKLSL---CGATSTLCSVCGLPADANASTWRHATALS 340
Query: 393 RFSRY 397
F+ +
Sbjct: 341 SFTEH 345
>gi|303314505|ref|XP_003067261.1| hypothetical protein CPC735_017180 [Coccidioides posadasii C735
delta SOWgp]
gi|240106929|gb|EER25116.1| hypothetical protein CPC735_017180 [Coccidioides posadasii C735
delta SOWgp]
gi|320037556|gb|EFW19493.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 383
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 158/351 (45%), Gaps = 39/351 (11%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR-PQD---KVLVAFSGSH 119
C C V +R +++ C+ C +++L K + + ++ P+D K+++ S
Sbjct: 10 CVDCRFAPACVTVRTRNL-CENCFIRFLQTKVLRRMERYRLRNAPKDRQRKLILPLSYGV 68
Query: 120 SSMALLHLLQEGMQL----SSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
SS+ALLH++ G+ L + KR F + + +D S+ + A+I A Y
Sbjct: 69 SSLALLHIV-SGLLLKQRTTGQKRTAFDLHVLIVDPVSLHPSKGAAASGRLAKIKEA--Y 125
Query: 176 FDSYFTCLEQAL------EPDNMKLYTDVAELPL--EQFAKDSEINKMFQ-TVTTLSSRQ 226
D+ ++ E L +PD + +PL D EI +F+ + +T ++R
Sbjct: 126 PDNTYS--EVPLRSIFDYDPDIRGDISQHTGIPLGSNPSRSDEEILNLFRASFSTATARA 183
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV--GFSDDR 284
+ L + L++ AK C I ++ + LA K +AN++ G+G+ + +V G S
Sbjct: 184 DIDGILLRRLIVAFAKSHKCDGILWGDSDSRLAAKTLANVAKGRGSSLVWNVCEGMS--- 240
Query: 285 TGDIITLRPLRDFSSKEVIYYNIF--NDLSPV---HVPSLATLADPLASLQKAAESFVTD 339
DI PLRD E+ Y + DL + + L++ S++ +V
Sbjct: 241 PWDIYFNFPLRDLYKSELEVYASYALRDLQQIIDQDPRNFEDLSNRHMSIEDLMSQYVLT 300
Query: 340 LQTNFPSTVSTVFRTADKLSLDLTSMNVNNT--CLLCKAPLDTRADLASSS 388
+P ++ + RT DK LT+ V N C+LC+ P D + AS S
Sbjct: 301 QGAKYPGVMANIVRTVDK----LTTPGVENAKMCILCRVPADENLNTASGS 347
>gi|384248163|gb|EIE21648.1| hypothetical protein COCSUDRAFT_48204 [Coccomyxa subellipsoidea
C-169]
Length = 409
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 144/333 (43%), Gaps = 52/333 (15%)
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYT-- 196
+I F + A+Y+D+ S++ + SE + +A L +A+ PD M L+
Sbjct: 19 QIAFQMGAVYVDE-SLTHGASSEDSCRAVEAVSA----------LHRAVAPD-MPLHCVQ 66
Query: 197 --DVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAET 254
DV + K S + ++ + V ++ R+ L+++LR LLL+ A +L K+ +
Sbjct: 67 LEDVFDGEEVAVDKGSLLVRLLEAVEDVTGREDLIESLRNALLLRVAARLGYNKLARGDC 126
Query: 255 QTDLATKIIANISLGKGAHVPLDVGFSDDRTGD--IITLRPLRDFSSKEVIYYNIFNDLS 312
T +A + IA+ + G G +P + D R G+ + P+R+ K++ L
Sbjct: 127 ATRVAVRTIASAAKGAGFSLPASIQHFDARGGEEGPAVICPVRNLPMKDLAMLCHHLSLP 186
Query: 313 PVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-------------- 358
PV P A SL AE FV LQ+ PSTV T+ RTA KL
Sbjct: 187 PVQPPRPPQRARRKPSLNTLAEGFVASLQSALPSTVPTILRTALKLQAFPWNHPSAVPSR 246
Query: 359 -----SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGAT--RFSRYVSNATREQLS---- 407
S+ C LC APL + A++A AT R ++ + + EQ+S
Sbjct: 247 GKEEKSVAPAHAASVPLCRLCSAPL-SPAEVAQQGSCATPGREAKMDAGSGEEQISATRE 305
Query: 408 --HVIISSESPDHASKVTTDV------NQTVGS 432
H+ S S A + T V N +GS
Sbjct: 306 GEHLTAESSSEPSADQRTKGVLHAKSANGNIGS 338
>gi|449437670|ref|XP_004136614.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Cucumis
sativus]
Length = 469
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 25/287 (8%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI- 140
+C C L KFR A+ + M+ P DKVLVAFSG S L + E MQ+ +H
Sbjct: 75 FCSDCFRSNLFAKFRQAVTSNAMISPSDKVLVAFSGGPCSRVALQFVHE-MQVKAHNNFE 133
Query: 141 --------LFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNM 192
+F V YI++ + + E I ++ S + L Q + ++
Sbjct: 134 ASRDRSLQVFGVGVAYINETAACSIPSDE-------IDKTVQTIQSVVSSLCQPRKNLHI 186
Query: 193 KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTA 252
V L + ++ K+ V ++ ++ L+ LR L + A + ++
Sbjct: 187 VQIESVYSSNLNDGRE--KLKKLLDAVNDVTGKEDLISYLRMLSLQKIAAENGYNRLLVG 244
Query: 253 ETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLS 312
+ +A +I++ G+G +P DV + D R ++ + PL D ++E+ + L
Sbjct: 245 TCTSRIACHVISSTVKGQGYSLPGDVQYIDAR-WEVPVVLPLLDCLAQELNMLCCVDGLK 303
Query: 313 PVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
V + ++ + + SFV LQ PS ST+ RTA KL+
Sbjct: 304 TVELTKKSS-----SGINDLVSSFVALLQVENPSRESTIVRTAGKLT 345
>gi|452824237|gb|EME31241.1| hypothetical protein Gasu_14830 [Galdieria sulphuraria]
Length = 364
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 134/316 (42%), Gaps = 41/316 (12%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK---- 138
C +C Q + H F+ + + + + D V VA SG +SS AL+ LL G LS +
Sbjct: 25 CDSCFQQAIIHNFKTTISRKGLAQFGDNVGVAASGGYSSQALIDLL--GRSLSEREDGKT 82
Query: 139 -RILFSVCAIYIDDGSISQVSISERKANNAQIAT----AMKYFDSYFTCLEQALEPDNMK 193
R+ V +ID S ++NA I A KY S+ C +A +
Sbjct: 83 SRMKMQVTIFHID-------CESPFLSSNAGIEVIQPLAAKY--SFRVCTAKA-SHSCQQ 132
Query: 194 LYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAE 253
L+ V E + KD + + L + + ++ AK C +F
Sbjct: 133 LWKQVGECLAWKDVKD------------IGDLEELSRIVVYRMVAFLAKSQGCKIVFDGL 180
Query: 254 TQTDLATKIIANISLGKGAHVPLDVGFSD--DRTGDIITLRPLRDFSSKEVIYYNIFNDL 311
+ + I+ +IS G G +P +V +D R DI P D + +++I Y +
Sbjct: 181 NASSICRNILTSISSGNGFAIPFEVSPADMSRRFFDISIHHPQHDITDRQLIRYVWMRQI 240
Query: 312 SPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTC 371
+ P+L TL P +S+ SF+ DL+ ST+ + +T+ ++ + L + C
Sbjct: 241 GFI-APNL-TLLGPTSSVDSLTVSFLKDLEEQHRSTIPNILKTSSRIVVPLQFSH----C 294
Query: 372 LLCKAPLDTRADLASS 387
LC+ P+ + S+
Sbjct: 295 SLCRVPVGSNGKFVST 310
>gi|242086064|ref|XP_002443457.1| hypothetical protein SORBIDRAFT_08g019770 [Sorghum bicolor]
gi|241944150|gb|EES17295.1| hypothetical protein SORBIDRAFT_08g019770 [Sorghum bicolor]
Length = 463
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 37/310 (11%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C+ V + C C +L KF+ A+ + M+RP D VL+AFSG +S
Sbjct: 47 CGKCDGGGAAVAVAGGVGMCVDCFRAHLFGKFKLAVTSNAMVRPTDAVLLAFSGGPASRV 106
Query: 124 LLHLLQEGMQL-------SSHKRIL--FSVCAIYIDDGSISQVSISERKANNAQIATAMK 174
L + E MQ +S+ + L F + ++D+ +S R + +I TA++
Sbjct: 107 ALQFIHE-MQSKAIQSWETSNSQALPAFRLGVAFVDESVLSV-----RPGH--EIDTAIE 158
Query: 175 YFDSYFTCLEQALEPDNMKLYTDVAELPLEQFA------KDSEINKMFQTVTTLSSRQYL 228
S + +L P + +L+ PLE K + + ++ + + R
Sbjct: 159 DIKSIVS----SLSPGDKQLHV----APLEDVISSGSDDKAARLKELVGVINDETGRDDF 210
Query: 229 LQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDI 288
++ LR L + A + TKI + +A +++ G+G +P DV + D R ++
Sbjct: 211 IRCLRMLSLQKIALENGYTKIMLGTCASGIACHVLSATVKGQGYALPADVQYVDTRW-EV 269
Query: 289 ITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTV 348
+ PL D ++E+ N+ +L + L L P + + SFV+ L+ PS
Sbjct: 270 PVVLPLHDCLAQEL---NLLCELDSLKTQQL--LDRPCSGINGLVASFVSRLREENPSRE 324
Query: 349 STVFRTADKL 358
T+ RTA KL
Sbjct: 325 HTILRTAQKL 334
>gi|389749993|gb|EIM91164.1| hypothetical protein STEHIDRAFT_91166 [Stereum hirsutum FP-91666
SS1]
Length = 529
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 173/455 (38%), Gaps = 101/455 (22%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL----------GKSKMMRPQDKV 111
K C +C G +V+R +YCK C ++ KFR L + ++P +
Sbjct: 25 KNCIKCKDAGGSIVIR-HAVYCKNCFQPLISAKFRKTLEPHINLQADGPRRSALKPAGDL 83
Query: 112 LVAFSGSHSSMALLHLLQE------------GMQLSSHKRILFS---VCAIYIDDGSISQ 156
LV SG S LL L+ G + K ++ VC + + D
Sbjct: 84 LVGISGGLGSTVLLDLVHRTYLAPRGTTDDYGGKSHPRKDKVWKKIRVCYVELCD----- 138
Query: 157 VSISERKANNAQIATAMKYFDSY-FTCL--EQALEPDNMKLYTDVAELPLE--------- 204
+ S + + ++++ ++ + F L + A +P L T A++P
Sbjct: 139 -AFSGMEDRTEMVRSSVERYEGFEFIALRVQDAFDP-AWWLKTTGAQMPASLSVDLTNED 196
Query: 205 ----------QFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAET 254
+ S + +++ T ++ + TL + LL AK + + +
Sbjct: 197 LPLSSSSSGSPPSPLSSLQTYLRSLPTQTAIPTSISTLVRVLLCYTAKSTGSSHLVLGTS 256
Query: 255 QTDLATKIIANISLGKGAHVP----------------------LDVGFSDDRTGDIITLR 292
T L+ +I++IS G G VP + + G++ +R
Sbjct: 257 LTSLSIALISSISQGGGFVVPQESYEEWSLPKTQLPATSAPSEMGKKRKKEWKGEVRVVR 316
Query: 293 PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVF 352
PLR+ KE + +N+L V L + + L K F+ L+ +FPSTVST+
Sbjct: 317 PLREIGMKECAAWAWWNELPVVGKEKLPGIRQTVGGLTK---DFIVGLEKDFPSTVSTIA 373
Query: 353 RTADKLSLDLTSMNVNNTCLLCKAPL-----DTRADLASSSMGATRFSRYVSNATREQL- 406
RT KL+ C LC+ P D +A ++ S+ A +A R+Q
Sbjct: 374 RTCGKLA---PKDEQGENCALCERPAQRTVQDWKARISIRSITAEN----TPSAARQQTL 426
Query: 407 -------SHVIISSESPDHASKVT-TDVNQTVGSQ 433
H ++S+SP T T + GSQ
Sbjct: 427 TPRLCYSCHTTLTSKSPRSVVSATKTGTSTPTGSQ 461
>gi|442570089|sp|Q1DK31.2|CTU2_COCIM RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|392869902|gb|EAS28437.2| cytoplasmic tRNA 2-thiolation protein 2 [Coccidioides immitis RS]
Length = 376
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 156/350 (44%), Gaps = 37/350 (10%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR-PQD---KVLVAFSGSH 119
C C V +R +++ C+ C +++L K + + ++ P+D K+++ S
Sbjct: 3 CVDCRFAPACVTVRTRNL-CENCFIRFLQTKVLRRMERYRLRNAPKDRQRKLILPLSYGV 61
Query: 120 SSMALLHLLQEGM---QLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
SS+ALLH++ + + + KR F + + +D S+ + A+I A Y
Sbjct: 62 SSLALLHIVSSLLLKQRTTGQKRTAFDLHVLIVDPVSLHPSKGAAASGRLAKIKEA--YP 119
Query: 177 DSYFTCLEQAL------EPDNMKLYTDVAELPL--EQFAKDSEINKMFQ-TVTTLSSRQY 227
D+ ++ E L +PD + +PL D EI +F+ + +T ++R
Sbjct: 120 DNTYS--EVPLRSIFDYDPDIRGDISQHTGIPLGSNPSRSDEEILNLFRASFSTATARAD 177
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV--GFSDDRT 285
+ L + L++ AK C I ++ + LA K +AN++ G+G+ + +V G S
Sbjct: 178 IDGILLRRLIVAFAKSHKCDGILWGDSDSRLAAKTLANVAKGRGSSLVWNVCEGMS---P 234
Query: 286 GDIITLRPLRDFSSKEVIYYNIF--NDLSPV---HVPSLATLADPLASLQKAAESFVTDL 340
DI PLRD E+ Y + DL + + L++ S++ +V
Sbjct: 235 WDIYFNFPLRDLYKSELEVYASYALRDLQQIIDQDPRNFEDLSNRHMSIEDLMSQYVLTQ 294
Query: 341 QTNFPSTVSTVFRTADKLSLDLTSMNVNNT--CLLCKAPLDTRADLASSS 388
+P ++ + RT DK LT+ V N C+LC+ P + AS S
Sbjct: 295 GAKYPGVMANIVRTVDK----LTTPGVENAKMCILCRVPAGENLNAASGS 340
>gi|254569404|ref|XP_002491812.1| Protein with a role in urmylation and in invasive and pseudohyphal
growth [Komagataella pastoris GS115]
gi|238031609|emb|CAY69532.1| Protein with a role in urmylation and in invasive and pseudohyphal
growth [Komagataella pastoris GS115]
gi|328351688|emb|CCA38087.1| UPF0432 protein C16orf84 homolog B [Komagataella pastoris CBS 7435]
Length = 457
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 152/360 (42%), Gaps = 44/360 (12%)
Query: 57 FSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL--GKSKMMRPQ------ 108
S + +C RC N G + K+ +CK C L+++ K R + K K+ PQ
Sbjct: 13 ISTSQNICQRCK-NMGSICFSRKEYFCKDCFLRFIRGKQRKLMMEDKFKVQYPQKGVESV 71
Query: 109 -DKVLVAFSGSHSSMALLHLLQEGM--QLSSHK-RILFSVCAIYIDDGSISQVSISER-K 163
V++A S SS+ L +L + Q +H+ R F + + +D+ ++S S R K
Sbjct: 72 SQNVMLALSMGSSSLVLFDILFNLLLEQTKTHRGRQGFHLKVVIVDESTLSDSDYSVRDK 131
Query: 164 ANNAQIATAMKY---FDSYFTCLEQALEPDNMKLYTD-VAELPLE------------QFA 207
+ A + + D F + ++P+ L +D V + ++ +
Sbjct: 132 VEELKEAYGIDHNCPVDVSF----KIVDPNQFILDSDQVGSILIDNDFQSYITGNNSEDT 187
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
K I ++ SSR+ +L+ + LL++ +NC I + T LA ++I+
Sbjct: 188 KKLTITEILDQTPNRSSREDILEMVIYQLLIRTCLVINCQTILFGHSMTKLADQVISLTV 247
Query: 268 LGKGAHVP--LDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADP 325
G+ + + L +I + PLRD EV++Y+ L +V + AD
Sbjct: 248 RGRASLIGKRLTDAVEIHNGSEIHIIHPLRDVLKSEVVHYSEMLQLERFNVMNQKKAADL 307
Query: 326 LAS-------LQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
L S + + S+ ++ ++ VSTV + KL L S N C++C L
Sbjct: 308 LKSKVNKSMTVNELTRSYFDSIEGDYSEVVSTVVKIGTKLD-QLRSTEHNKRCIVCDIQL 366
>gi|119587184|gb|EAW66780.1| hypothetical protein LOC348180, isoform 1, isoform CRA_f [Homo
sapiens]
Length = 122
Score = 72.0 bits (175), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 53/87 (60%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 28 CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSS 87
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYID 150
++ + EG+ S KR+ F I++D
Sbjct: 88 MVWQVLEGLSQDSAKRLRFVAGVIFVD 114
>gi|452986183|gb|EME85939.1| hypothetical protein MYCFIDRAFT_202333 [Pseudocercospora fijiensis
CIRAD86]
Length = 359
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 149/345 (43%), Gaps = 36/345 (10%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK-------FRAALGKSKMMRPQDKVLVAF 115
LC RC + +R + + C+ C +Y++ K FR R K+L+
Sbjct: 15 LCRRCQLIEPAIDVRTEPL-CEHCFTKYVHSKVVKRMDSFRVRHAGPAHHR---KLLLPL 70
Query: 116 SGSHSSMALLHLLQEGMQLSSHK--RILFSVCAIYIDDGSISQVSISERKANNAQIATAM 173
S S+ALLH+L + + + K R + + ++ID+GS ++ ++ A++ +
Sbjct: 71 SFDACSLALLHILSQHQRGQAEKTGRKGYKLYILHIDNGS---AVTTDDGSSLAKVKS-- 125
Query: 174 KYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKD--------SEINKMFQTVTTLSSR 225
+Y + + Q + N+ D++ L E D ++ + + ++R
Sbjct: 126 RYPEHEY----QTMPMSNLFSLDDMSGLFPESVTSDQGNQLDDNERLSALLAASKSATTR 181
Query: 226 QYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRT 285
Q L L + L ++ AK C I ++ T LA +I+A + G+G +P V +
Sbjct: 182 QDLSLILTRRLAVRQAKNTGCEAIIWTDSTTRLAERILAETAKGRGLSLPWVVADGESPQ 241
Query: 286 GDIITLRPLRDFSSKEVIYYNIF----NDLSPVHVPSLATLADPLASLQKAAESFVTDLQ 341
G I PLR+ +KE Y F D V + A ++ ++ + + ++
Sbjct: 242 G-IPFYFPLRELLTKEAHAYLSFLDPAMDADMVRSEARAPVSTKNTTIDDLMQQYFHTVE 300
Query: 342 TNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLAS 386
+PS V+ V RT +KL + + C LC PL+ +A S
Sbjct: 301 QQYPSIVANVVRTTNKLKAP-SIRQIEQLCELCSMPLEGKAPAKS 344
>gi|168012350|ref|XP_001758865.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690002|gb|EDQ76371.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 452
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 140/335 (41%), Gaps = 31/335 (9%)
Query: 34 ACSKEQVLNGDEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNH 93
ACS E + + DE RV + +C +C L C CL L
Sbjct: 19 ACSSENLCSKDE------RVFPPNGKKSGVCAKCKEQPTSEDFEL----CCTCLHTNLIS 68
Query: 94 KFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI---------LFSV 144
KF+ A+ ++ ++ P D VLVAFSG +S L L+E ++L + +F +
Sbjct: 69 KFKTAVNQNSLVTPADHVLVAFSGGAASRVALEFLRE-IRLRQQTDLDASRGQGTRVFGL 127
Query: 145 CAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLE 204
+++D+ + + + ++ S + P ++ DV E E
Sbjct: 128 GVVFVDEAAAWS-------GPSLDLEHTIEEISSIILTESERPVPLHIAKLQDVFEA--E 178
Query: 205 QFAKDSE-INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKII 263
E + ++ + V ++ ++ L+ LR +L + AK+ TK+ + +A + I
Sbjct: 179 GLRSSVEMLQELLRNVEDVTGKEDLVTYLRMQVLQKIAKEHGYTKLVLGVCSSRIAARSI 238
Query: 264 ANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA 323
A + G+G D+ + D R + L PLRD ++E+ Y +L V +
Sbjct: 239 AATAKGQGYSFSADIQYWDSRWPVTVVL-PLRDVLARELDVYCRLANLKTVVNKNTLHGT 297
Query: 324 DPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
D S+ + + FV+ LQ S T+ RT KL
Sbjct: 298 DKSKSINELSREFVSLLQEQNFSREYTITRTMGKL 332
>gi|119587179|gb|EAW66775.1| hypothetical protein LOC348180, isoform 1, isoform CRA_a [Homo
sapiens]
Length = 221
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 86 CLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVC 145
C + HKFRA LGK++++ P +KVL+A+SG SS +++ + EG+ S KR+ F
Sbjct: 25 CFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDSAKRLRFVAG 84
Query: 146 AIYIDDGSISQVSISERKANNAQIATAMKY--FDSYFTCLEQALEPDNMKLYTDVAELPL 203
I++D+G+ S+ ER A++ ++ F + LE+ L+ EL
Sbjct: 85 VIFVDEGAACGQSLEERSKTLAEVKPILQATGFPWHVVALEEVFSLPPSVLWCSAQELVG 144
Query: 204 EQFAKDSEINKMFQTVTTLSS 224
+ A + ++ Q L +
Sbjct: 145 SEGAYKAAVDSFLQQQHVLGA 165
>gi|345497369|ref|XP_003427971.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like, partial
[Nasonia vitripennis]
Length = 375
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 4/222 (1%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK C + + KF+ L K+K++ K+LV S L +L+++ ++ +
Sbjct: 23 CKNCFTKKILSKFKYNLSKNKILHTNSKILVVHSDEDKDPMLHYLVKKSIKECPIVDLPK 82
Query: 143 SVCAIYIDDGSISQ-VSISERKANNAQIATAMKY-FDSYFTCLEQALEPDNMKLYTDVAE 200
V +YIDD + + E K + ++ ++ F+ Y L N+ L
Sbjct: 83 KVYFLYIDDNVHKKDAGVKELKIRDNLLSEKSQFRFEYYRIHLSDFFNEKNI-LLLQTNN 141
Query: 201 LPLEQFAKDSEI-NKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLA 259
++ ++S+I N + + +++Q LL LR L+++ AKKLNC + + DL+
Sbjct: 142 TKIDITLENSQILNNFGEKMWDNTAKQELLSRLRNKLVIKIAKKLNCNIVLINDLAIDLS 201
Query: 260 TKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKE 301
KI++N+ LGKG +P + + I P++ F+ E
Sbjct: 202 AKILSNMILGKGIDIPYKYFLENKKDCKISFYYPMQSFTQSE 243
>gi|169779233|ref|XP_001824081.1| cytoplasmic tRNA 2-thiolation protein 2 [Aspergillus oryzae RIB40]
gi|238499861|ref|XP_002381165.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|121799786|sp|Q2U667.1|CTU2_ASPOR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|83772820|dbj|BAE62948.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692918|gb|EED49264.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|391873113|gb|EIT82187.1| cytoplasmic tRNA 2-thiolation protein [Aspergillus oryzae 3.042]
Length = 361
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 150/337 (44%), Gaps = 31/337 (9%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR--PQDK---VLVAFSGS 118
C C + LR + + CK C ++++++K + ++ R +DK +L S
Sbjct: 10 CVDCRDAEAILTLRRRRL-CKDCYIKFVSYKVFKRMENYRLNRGFAKDKPCKLLFPLSYG 68
Query: 119 HSSMALLHLLQEGMQLSS---HKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
SS LLH+L + +++ H F + + I+ +IS A++ A K
Sbjct: 69 LSSSVLLHMLHDQLEVQRSKVHGSPGFDLHVLIIEPSTIS----PSNPAHDEGFELAQKC 124
Query: 176 FD-SYFTCLEQ----ALEPDNMKLYTDVAELPLE---QFAKDSEINKMFQTVTTLSSRQY 227
F FT + AL PD + + A E + +N + T +S+
Sbjct: 125 FPLCSFTKVPFHSIFALVPDIKETMSQFAGKGFEDDPSLSDAERLNAFRSCIATSTSKAD 184
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD 287
+ L L++ AK+++C I ++ + LA K +AN++ G+G+ V V SD +
Sbjct: 185 VDHILMNRLIVAFAKQMDCQAIIWGDSDSRLAAKTLANVAKGRGSSVIWQV--SDGMSPF 242
Query: 288 IITLR-PLRDFSSKEVI-YYNIFNDLSPVHVPSLATLADPLA---SLQKAAESFVTDLQT 342
+ PLRD + E+ Y + F +L+ + VP A+ L S+ + +V
Sbjct: 243 GLEFNFPLRDLFTAELRDYASFFPELTKLIVPDEPLPANTLTKNLSIDELMMRYVLTQGE 302
Query: 343 NFPSTVSTVFRTADKLSLDLTSMNVN-NTCLLCKAPL 378
+P + V RTA+K LD++ M N + C C APL
Sbjct: 303 KYPGVMLNVTRTANK--LDVSQMPANLSHCTFCAAPL 337
>gi|429863480|gb|ELA37931.1| cytoplasmic tRNA 2-thiolation protein 2 [Colletotrichum
gloeosporioides Nara gc5]
Length = 395
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 151/359 (42%), Gaps = 53/359 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGK---------SKMMRPQDKVLVA 114
C RC G V KD C+AC ++ + ALGK + K L+
Sbjct: 10 CRRCKIPTGLTVR--KDPLCEACYEAHIAQRVVKALGKPWKEAKEKIGNKPNAKGKYLLG 67
Query: 115 FSGSHSSMALLHLLQEGMQ-LSSHK-RILFSVCAIYIDDGSISQVSISERKANNAQIATA 172
S HSS A++ +L + +Q L K R+ + V AI+ID +S S S K+ +Q+
Sbjct: 68 LSFGHSSAAMVQVLDKNLQSLHDRKLRVAYEVHAIHIDT-DLSGTSQSSAKSPASQL--- 123
Query: 173 MKYFDSYFTCLEQALEP--DNMKLYT-DVAELPLEQ--FAKDSEINKMFQTVTTLSSRQY 227
+ ++ F L P D ++L T D + LP Q ++ M + + +++SR
Sbjct: 124 LDKYEERFPNLSMQCVPLSDALRLDTIDWSVLPALQKDLEPSQQVRAMLEALPSVTSRVD 183
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVG-------- 279
+L+ L ++LLL A C + T T LA +A + G+G VPL V
Sbjct: 184 ILRLLVRHLLLSLAIDKECHALLLGCTTTALAELTLAETAKGRGFAVPLQVNDGQVPITT 243
Query: 280 FSDDR---------TGDIITLRP----LRDFSSKEVIYYN------IFNDLSPVHVPSLA 320
F + +G T P LRD +EV Y I + S
Sbjct: 244 FPRSKEQSEEGQPASGTQKTTFPVYYLLRDVFKREVTTYTGLVQPPIRELIQDAGSSSST 303
Query: 321 TLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLD 379
++ S++ + +++ ++PS V+ V RT KL + N +TC LC LD
Sbjct: 304 IVSHRELSIEDVMTRYFEEVEESYPSVVANVVRTTGKLIRE----NAGDTCALCGMDLD 358
>gi|358334537|dbj|GAA53012.1| cytoplasmic tRNA 2-thiolation protein 2 [Clonorchis sinensis]
Length = 651
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL 291
+RQ L + AK+L C + +T T LAT + ++ G+G V G D R D+ +
Sbjct: 425 IRQLLFVTCAKQLGCDFLCLGDTGTRLATSFLVSVIEGRGDQV--CGGTVDKRYQDVTII 482
Query: 292 RPLRDFSSKEVIYYNIFNDLSPV---HVPSLATLADP-LASLQKAAESFVTDLQ-TNFPS 346
RPL +F +KE+++Y F L P+ +V + A L P + SL + E F+ LQ FPS
Sbjct: 483 RPLYEFQTKELVFYARFCRLEPLISYNVVTDAVLERPGVTSLPRLCEDFLLHLQFGGFPS 542
Query: 347 TVSTVFRTAD 356
T TV R D
Sbjct: 543 TTQTVLRNFD 552
>gi|212224843|ref|YP_002308079.1| ATPase [Thermococcus onnurineus NA1]
gi|212009800|gb|ACJ17182.1| ATPase [Thermococcus onnurineus NA1]
Length = 323
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 119/308 (38%), Gaps = 46/308 (14%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
YCK + + KF+ + K +++ +++ V SG S+ LLHLL + K+
Sbjct: 21 YCKKHFNEMVEKKFKETVKKYRLVEKGERIAVGVSGGKDSVVLLHLLAK-----LQKKFP 75
Query: 142 FSVCAIYIDDGSIS----QVSISERKANNAQIATAMKYFDSY--FTCLEQALEPDNMKLY 195
F + A+ ID+G V I+ R A I + F Y FT E
Sbjct: 76 FELVAVTIDEGIAGYRPPSVEIARRNAEKLGIEHHIYSFKEYIGFTLDETV--------- 126
Query: 196 TDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQ 255
EI F+ + + Y R+ LL AAK++ K+
Sbjct: 127 ---------------EIMGSFEKGERVGACSY-CGVWRRWLLNHAAKEVEADKLAVGHNL 170
Query: 256 TDLATKIIANISLGKGAHVPLDVGFSDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSPV 314
D I NI G A + + ++ +++ ++PLR+ KE+I Y + N++
Sbjct: 171 DDEVQMFIMNILRGDIARLGRTGPYYEEIHPELVPRIKPLREIPEKEIILYAVLNEIE-- 228
Query: 315 HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN-----N 369
L+ + + + ++ +++ P T + R+ DKL + N
Sbjct: 229 --VDLSECPYAVEAFRAEIRDWINEMEEKHPGTKYQILRSYDKLFPLIAKTYTKRTSELN 286
Query: 370 TCLLCKAP 377
C +C P
Sbjct: 287 RCKICGQP 294
>gi|255722057|ref|XP_002545963.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240136452|gb|EER36005.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 450
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 135/333 (40%), Gaps = 50/333 (15%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFR---------AALGKSKMMRPQDKVL 112
KLC +C T N V R++D +CK C + ++ K R GKS + KVL
Sbjct: 12 KLCQKCKTQNAVVHARVED-FCKDCYIFFIRGKLRKQINEERYKVKFGKSLELYGTQKVL 70
Query: 113 VAFSGSHSSMALLHL---LQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI 169
+A SG SS+ LL + L EG + F + + +D+ SE + N +I
Sbjct: 71 LALSGGESSIVLLDIIGALLEGQNKQHKGKQGFDLVVVNLDE--------SEMDSLNKKI 122
Query: 170 ATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFA------------KDSEINKMFQ 217
+ F+ + L+ ++ Y D + L K+ + ++ +
Sbjct: 123 QDTIPKLLQKFSPVNITLKILSLNSYIDESTLHKISLTPSFTASIKSIDPKNVTLVELLK 182
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGA--HVP 275
SS + LL + ++L+L+ A + C I T LA +IIA G+G+ H
Sbjct: 183 KCPNKSSAEDLLSIVYEDLILRVAAEEGCQTILYGHCMTRLANEIIALTVKGRGSIIHKA 242
Query: 276 LDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAES 335
+ + +I + PLR+ E+ Y +L + S + +L
Sbjct: 243 ITDHVETIDSKEIKVMFPLREILYAEIAAYIKLAELQAFVIESTIEKSKINKNLT----- 297
Query: 336 FVTDLQTN---------FPSTVSTVFRTADKLS 359
+ DL TN + ST STV +T +KL
Sbjct: 298 -IRDLTTNYFRQLDATGYASTASTVVKTGEKLG 329
>gi|452077464|gb|AGF93423.1| PP-loop domain-containing protein [uncultured organism]
Length = 319
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 127/301 (42%), Gaps = 41/301 (13%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
C C + + +FR + K ++ P D+V+ SG S+ L LL + S ++ I
Sbjct: 23 CDRCFSKNIEKRFRRTVNKYDLLEPGDRVIAGVSGGSDSVVNLKLLAD---YSDYRDI-- 77
Query: 143 SVCAIYIDDG--SISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAE 200
V ++ ID+G S+ K N+ ++ D YF + DV
Sbjct: 78 EVVSLTIDEGIEGYRDESVPIVKENSKKLGV-----DHYFV------------RFKDVFG 120
Query: 201 LPLEQFAK-DSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLA 259
L++ A SE++ L LR++LL QA+++L K+ D
Sbjct: 121 KSLDELADISSEVDGPDPCT--------LCGILRRSLLNQASRELGGDKLAIGHNLDDEV 172
Query: 260 TKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSL 319
I+ N G + + ++ + G + ++PLR+ KE+ Y + DLS +H+ +
Sbjct: 173 QTIMLNYIRGDISRLKRLGPKTEAQEGFVQRIKPLREIMEKEIAIYGMLKDLS-IHIATC 231
Query: 320 ATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN---NTCLLCKA 376
+ + ++ F+ L+ N P+T + R ++L +L S + + C +C
Sbjct: 232 SY----VGGMRSEVRDFINKLEDNHPTTKFRILRMFEELKPNLPSESEDFELKRCEICDE 287
Query: 377 P 377
P
Sbjct: 288 P 288
>gi|154303852|ref|XP_001552332.1| hypothetical protein BC1G_08810 [Botryotinia fuckeliana B05.10]
Length = 286
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 35/254 (13%)
Query: 147 IYIDDGSISQVSISERKANNAQIATAMKYFDSY------FTCLEQALEPDNMKLYT-DVA 199
+Y+DD ++R+A+ A + KY D Y L++AL+ + + + ++
Sbjct: 15 LYLDD--------ADREASAALL---QKYKDQYPRHSYSSYGLQEALQLEGIDWASLGIS 63
Query: 200 ELPLEQFAKDS-EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
++P + S ++ + T+++ +SR ++ TL LL+ AK+ C I +T T L
Sbjct: 64 DVPTQSTEASSLDLQNIVSTMSSATSRADIVSTLLNRLLVDVAKRNECESILFGDTTTRL 123
Query: 259 ATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPS 318
A K + + G+G +P V G PLRD KE++ ++ S +P
Sbjct: 124 AEKTLTETAKGRGFSLPWQVSDGPSPYGLGFNY-PLRDILKKEIMTFSS----STTPLPE 178
Query: 319 LATLADPLASLQKAAESFVTD---------LQTNFPSTVSTVFRTADKLSLDLTSMNVNN 369
L +P + + +++S D ++ NFPS V+ V RT+ KL ++ +V+
Sbjct: 179 LVVYREPPSHISASSKSTTIDDLMAQYFESVEENFPSIVANVVRTSSKLK--PSTDHVSK 236
Query: 370 TCLLCKAPLDTRAD 383
C +C P+ D
Sbjct: 237 GCGICGLPVAEGTD 250
>gi|406697505|gb|EKD00764.1| hypothetical protein A1Q2_04956 [Trichosporon asahii var. asahii
CBS 8904]
Length = 402
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 224 SRQYLLQTLRQNLLLQAAKKL-NCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF-- 280
SR LL + LL AA L N + ET T A ++I + G+G +PL++
Sbjct: 130 SRPTLLGHILDGLLTLAATTLPNVGVLLEGETSTRQAERVIGATAGGRGWALPLELATRL 189
Query: 281 -----------SDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSL-ATLADP--- 325
S + T ++ ++P++D + KE Y + L V+ T+ +P
Sbjct: 190 PLTTSASSSDPSVEATTRVVRIKPMKDITVKEAAIYCRTSGLESVNERKWDGTVGEPRRD 249
Query: 326 ------LASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLD 379
AS++ E F+ L + PSTV+T+ RT +KL T N C LC+ P+D
Sbjct: 250 ARGKGAFASIEALTERFIATLNVSHPSTVNTINRTGNKLQFAGTPNNEQTRCPLCEMPVD 309
Query: 380 TRA 382
A
Sbjct: 310 DSA 312
>gi|150866955|ref|XP_001386728.2| hypothetical protein PICST_50402 [Scheffersomyces stipitis CBS
6054]
gi|226711458|sp|A3M0F4.2|CTU2_PICST RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|149388211|gb|ABN68699.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 448
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 150/339 (44%), Gaps = 55/339 (16%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYL---------NHKFRAALGKSKMMRPQDK 110
+D C RC ++ R K+ +CK C ++++ + +++ G + Q K
Sbjct: 13 SDTECQRCKAVPAVLITR-KEAFCKNCFIRFIRGKQRKSMIDERYKVKYGAVQEKIGQQK 71
Query: 111 VLVAFSGSHSSMALL----HLLQEGMQLSSHK-RILFSVCAIYIDDGSISQVS------- 158
VL+A SG SS+ L LLQE Q+ SHK R+ F + + ID+ + ++
Sbjct: 72 VLLALSGGVSSLVLTDVVASLLQE--QIESHKGRMGFELVLLNIDEFELESLNKRIEEIL 129
Query: 159 --ISERKANNAQIATAMKYFDSYFTCLEQALEPDNM--KLYTDVAELPLEQFAKDSEINK 214
+ ER A I + +S+ +++A+ + K +T +A+ ++ K + +
Sbjct: 130 PILVERYAP-VNIQYKVLSIESFL--IDRAMIQKVLLNKDFTAIAQRLSDEQNKYT-VAD 185
Query: 215 MFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHV 274
M + SS + LL + + L+L+ A NC I + T +A +I+A G+G+ V
Sbjct: 186 MLKLCPNKSSMEDLLTVIYEELILRTAFIENCETIIYGHSMTRIANEILALTVRGRGSSV 245
Query: 275 -----PLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASL 329
V F D + L PLRD E+I Y +L+ + V S + +L
Sbjct: 246 YKAIADHTVQFMDK---EFTILFPLRDVLFAEIIAYADLIELNKLEVKSTIVKSKITKNL 302
Query: 330 QKAAESFVTDLQTN---------FPSTVSTVFRTADKLS 359
+ DL TN + ST STV +T +KL
Sbjct: 303 T------IRDLTTNYFSHLDATGYASTASTVVKTGEKLG 335
>gi|408382222|ref|ZP_11179768.1| hypothetical protein A994_07205 [Methanobacterium formicicum DSM
3637]
gi|407815229|gb|EKF85849.1| hypothetical protein A994_07205 [Methanobacterium formicicum DSM
3637]
Length = 307
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 129/324 (39%), Gaps = 46/324 (14%)
Query: 63 LCPRCNTNNGEVVLRLKD---IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
+C +C N +++++ K + C+ C + + K + K K++ DKVLVA SG
Sbjct: 3 VCHKCG--NPQIIIKRKQSGQMLCQECFINTVQEKVLKDIRKQKLVEKGDKVLVALSGGK 60
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSIS-QVSISERKANNAQIATAMKYFDS 178
S+ LL +L + KR + + A+ ID+G + E A NA++ S
Sbjct: 61 DSVMLLDILN-----NLRKRKIIDLVAVTIDEGICGYREDGVEIAAQNAELIGVKHRIVS 115
Query: 179 YFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLL 238
+ D L++ +D+ +++ T + R+ +
Sbjct: 116 ----------------FKDYVGHTLDEIMEDTG-DRIACTYCGV---------FRRWIFN 149
Query: 239 QAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVP-LDVGFSDDRTGDIITLRPLRDF 297
Q A++ TKI T D A I+ N G ++ + V G + ++PLR+
Sbjct: 150 QVAREEGATKIATGHNLDDEAQSILMNYMEGNIQNLTRIGVKSESSYEGFTVKIKPLREI 209
Query: 298 SSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK 357
+E Y + DL PVH+ D S + F+ D+ + P+ + + R DK
Sbjct: 210 PERETALYVVARDL-PVHLAGCPYAGD---SFRAKIRDFLKDISQDHPTIMYSTLRGFDK 265
Query: 358 ----LSLDLTSMNVNNTCLLCKAP 377
L + + C C P
Sbjct: 266 IKPVLKEEFSRKATTGVCAECGEP 289
>gi|146421981|ref|XP_001486933.1| hypothetical protein PGUG_00310 [Meyerozyma guilliermondii ATCC
6260]
Length = 420
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 157/343 (45%), Gaps = 49/343 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALG------KSKMMRPQDKVLVAFSG 117
C RC+T + V+L ++ YC C ++++ K R + K K + +VL+A SG
Sbjct: 14 CQRCSTKDA-VLLARRENYCGDCFIRFIRGKQRRLMQDEAYKVKYKTVENPHRVLLALSG 72
Query: 118 SHSSMALL----HLLQEGMQLSSHK-RILFSVCAIYID-------DGSISQVSISERKAN 165
SS+ LL LLQE Q H R F++ + +D D S + ISE K+
Sbjct: 73 GSSSLVLLDAVASLLQE--QAGQHGGRQGFALTVVNVDERERLKLDKSFQDI-ISELKSR 129
Query: 166 NAQIATAMKYFDSYFTCLEQALEPD-----NMKLYTDVAE--LPLEQFAKDSEINKMFQT 218
+ D F L+ + D ++K+ +D + +PL K + IN + +
Sbjct: 130 YLPV-------DIDFVSLDYDMYVDGRLLHHIKVASDFSSYSIPLN---KGTNINDILKG 179
Query: 219 VTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV 278
+ SS + LL + LLL+ A C + + T LA +++A G+G+ + V
Sbjct: 180 CNSKSSEEDLLLIILNELLLKTAITHQCGTLLYGHSMTRLADEVLALTIKGRGSTIHSSV 239
Query: 279 -GFSDDRTGDIITLR-PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK----- 331
+++ +G I ++ PLRD E+ Y L V V SL T+ DP+ + K
Sbjct: 240 LDHTEEISGQTINVKYPLRDVLMGEIEAYCKLAKLDSV-VMSL-TIPDPVINKNKTVRGL 297
Query: 332 AAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLC 374
A+ F T + ST STV RTA KL+ T + TC +C
Sbjct: 298 TAQYFRQLDATGYSSTASTVVRTAAKLAAP-TVGTKSGTCKVC 339
>gi|410720556|ref|ZP_11359911.1| TIGR00269 family protein [Methanobacterium sp. Maddingley MBC34]
gi|410600844|gb|EKQ55368.1| TIGR00269 family protein [Methanobacterium sp. Maddingley MBC34]
Length = 307
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 129/324 (39%), Gaps = 46/324 (14%)
Query: 63 LCPRCNTNNGEVVLRLKD---IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
+C +C N +++++ K + C+ C ++++ K + K K++ DKVLVA SG
Sbjct: 3 VCHKCG--NPQIIIKRKQSGQMLCQECFIKFIQEKVLRDIRKQKLVEKGDKVLVALSGGK 60
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSIS-QVSISERKANNAQIATAMKYFDS 178
S+ LL +L + KR + + A+ ID+G + E A NA++ S
Sbjct: 61 DSVMLLDILN-----NLRKRRIIDLVAVTIDEGICGYREEGVEIAAQNAELIGVKHRIVS 115
Query: 179 YFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLL 238
+ + L+ ++ D + + T R+ +
Sbjct: 116 FKDYIGHTLD----EIMADTGD----------------RIACTYCG------VFRRWIFN 149
Query: 239 QAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVP-LDVGFSDDRTGDIITLRPLRDF 297
Q A++ T+I T D A II N G ++ + V G + ++PLR+
Sbjct: 150 QVAREEGATRIATGHNLDDEAQSIIMNYMEGNIQNLTRIGVKSESSYEGFTVKIKPLREI 209
Query: 298 SSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK 357
+E Y + DL PVH+ D S + F+ ++ + P+ + + R DK
Sbjct: 210 PERETALYVMARDL-PVHLAGCPYAGD---SFRAKIRDFLKEISQDHPTIMYSTLRGFDK 265
Query: 358 ----LSLDLTSMNVNNTCLLCKAP 377
L + + + C C P
Sbjct: 266 IKPVLKEEFSRKSSTGVCAECGEP 289
>gi|115489352|ref|NP_001067163.1| Os12g0588900 [Oryza sativa Japonica Group]
gi|122203320|sp|Q2QMW0.1|CTU2_ORYSJ RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|77556959|gb|ABA99755.1| expressed protein [Oryza sativa Japonica Group]
gi|113649670|dbj|BAF30182.1| Os12g0588900 [Oryza sativa Japonica Group]
gi|125579901|gb|EAZ21047.1| hypothetical protein OsJ_36692 [Oryza sativa Japonica Group]
gi|215697709|dbj|BAG91703.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 464
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 33/308 (10%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C V + C C L KF+ A+ + M+RP D VL+AFSG +S
Sbjct: 47 CGKCGGGAAAVAVAGGLGLCGECFRANLLGKFKLAVTSNAMVRPTDSVLLAFSGGPASRV 106
Query: 124 LLHLLQ-------EGMQLSSHKRI-LFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
L + E +S+ + + +F V ++D+ + E I A++
Sbjct: 107 ALQFIHEMRCKAIESWDVSNSQALPVFGVGVAFVDESVLCSKPRDE-------IEMAIED 159
Query: 176 FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSE-----INKMFQTVTTLSSRQYLLQ 230
S + L ++ ++ DV F+ +SE + + + + R+ L+
Sbjct: 160 IRSIVSSLSTGVKAMHIARLEDV-------FSTESEDGERRLREAVDMIGDDTGREDFLR 212
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT 290
LR L + A + KI + +A +++ G+G +P DV + D R +I
Sbjct: 213 CLRMLSLQKIAMENGYAKIMLGSCASAIACHVLSATVKGQGYSLPADVQYVDTRW-EIPV 271
Query: 291 LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVST 350
+ PLRD ++E+ + L + L P + SF+ L+ PS T
Sbjct: 272 VLPLRDCLAQELTLLCELDSLK-----TQQHLDRPSNGINSLVASFIKRLREENPSREHT 326
Query: 351 VFRTADKL 358
+ RTA KL
Sbjct: 327 IVRTAQKL 334
>gi|224087018|ref|XP_002308030.1| predicted protein [Populus trichocarpa]
gi|222854006|gb|EEE91553.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 147/352 (41%), Gaps = 42/352 (11%)
Query: 28 MDPHPRACSKEQVLNGDE--EITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKD---IY 82
M + C NGD+ + + + + ++ LC +C TN+ L +
Sbjct: 1 MSCNSSGCQSNCYKNGDQVSDSPPPPPTLAAANNSNNLCLKCKTNSPITPGSLSGDEARF 60
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI-- 140
C C + KFR A+ M+ P D VLVAFSG SS L + G+Q + K
Sbjct: 61 CADCFRSNIYGKFRLAVTSQAMISPSDNVLVAFSGGPSSRVALQFVH-GLQDRAQKNFEA 119
Query: 141 -------LFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMK 193
+F V +ID+ ++ VS + ++ A++ S + L P +
Sbjct: 120 SKDKSLPVFGVGVAFIDESAVYPVS-------SDKVDGAIQDMRSVVS----NLAPPTKQ 168
Query: 194 LYTDVAELPLEQ-FAKDS-----EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
L+ +P+E +A DS + K+ V + ++ LL LR L A +
Sbjct: 169 LHV----VPIENIYASDSSDGKDRLTKLLDAVNDATGKEDLLLHLRMLALQMVASQNGYN 224
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
++ + +A ++A G+G + D+ + D R +I + PLRD +S+E+ N+
Sbjct: 225 RLILGSCTSRIACHVLAATVKGQGYSLSADIQYVDARW-EIPVVLPLRDCTSQEL---NL 280
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
L + +L + + SFV LQ S T+ RTA KL+
Sbjct: 281 LCQLDGLK--TLQPFDSTPSGINGLISSFVNVLQEENSSRECTILRTAGKLT 330
>gi|354544935|emb|CCE41660.1| hypothetical protein CPAR2_802100 [Candida parapsilosis]
Length = 449
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 146/353 (41%), Gaps = 55/353 (15%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKM--------MRPQD 109
SR D C RC N + R + +CK C L+ + K R + K + +
Sbjct: 8 SRTDITCQRCKQNTAILKAR-SEFHCKECYLRLVRGKQRKQMSTEKYKINYKKSKLGTLE 66
Query: 110 KVLVAFSGSHSSMALL----HLLQEGMQLSSHKRIL-FSVCAIYIDDGSISQVSISERKA 164
KVLVAFSG SS+ LL +LLQE Q +H+ + F + + +D+ E K
Sbjct: 67 KVLVAFSGDVSSLVLLDVLGNLLQEQNQ--THRGLQGFEIVVVNLDE--------KELKE 116
Query: 165 NNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAEL-------PLEQFAKDSEINK--- 214
N ++ + S + +E + ++ + D L A +IN
Sbjct: 117 LNIEVEGILPELLSRYEPVEIIFKTISLNSFVDFKSLNQIYIENDFSSTANPVDINDCSF 176
Query: 215 --MFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGA 272
+ + SS + LL + + LLLQAA + C I + T +A +IIA G+G+
Sbjct: 177 LDLLKRCPNKSSAEDLLTIVFEKLLLQAAYEEGCGTIVFGHSMTRIANEIIALTVKGRGS 236
Query: 273 HVP-LDVGFSDDRTG-DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQ 330
+ L ++ G +I + PLRD E+ Y +DL V S + +L
Sbjct: 237 SIHRLISNRTETYNGKEIDIIFPLRDLLFAEIDEYATLSDLKKYAVHSAVVKSRVSKNLT 296
Query: 331 KAAESFVTDLQTNFPSTV---------STVFRTADKLSLDLTSMNVNNTCLLC 374
+ DL +N+ S + STV + KL + V NTC +C
Sbjct: 297 ------IRDLVSNYFSNLDTTGYSSTTSTVMKIGQKLG--SSESKVQNTCKVC 341
>gi|241958382|ref|XP_002421910.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223645255|emb|CAX39910.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 452
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 147/350 (42%), Gaps = 49/350 (14%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL---------GKSKMMRPQDKVL 112
++C +C T N + R++ + C C ++++ K R + G++ ++L
Sbjct: 12 EICQKCKTENAIIHARVEKL-CSNCYIRFIRGKLRKQMHDERYKVKFGRAIEQYGTQRIL 70
Query: 113 VAFSGSHSSMALL----HLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER------ 162
+A SG SS+ LL LLQE +L K+ F + + +D+ +S S++ R
Sbjct: 71 LALSGGESSLVLLDILGSLLQEQNELHKGKQ-GFELVVVNLDEYELS--SLNNRIKYTIP 127
Query: 163 ----KANNAQIATAMKYFDSYFT--CLEQ-ALEPDNMKLYTDVAELPLEQFAKDSEINKM 215
+I + DSY CL + +L PD L + + + ++
Sbjct: 128 GLLKTYQPVKIDLKVLSLDSYIDEDCLHRISLTPDFKALSKRINPTRVT-------LTEI 180
Query: 216 FQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVP 275
Q SS + LL + +L+L+ A K NC + T LA +IIA G+G+ +
Sbjct: 181 LQLCPNKSSAEDLLTVVYNDLILRVAAKENCQTVVYGHCMTRLANEIIALTVKGRGSIIH 240
Query: 276 LDVGFSDDRTGD--IITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAA 333
+ + D I + PLR+ E+ Y +L+ + S T+A +
Sbjct: 241 KSIADHIEIVADREIKVMFPLREILQAEISAYVKLAELNKYVISS--TIAKSKINKNLTI 298
Query: 334 ESFVTDL-----QTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
T+ T + ST STV +T +KL + NV C +C A +
Sbjct: 299 RDLTTNYFKQLDATGYASTASTVAKTGEKLG---SPSNVLCQCQICGADI 345
>gi|401888746|gb|EJT52697.1| hypothetical protein A1Q1_02747 [Trichosporon asahii var. asahii
CBS 2479]
Length = 402
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 24/183 (13%)
Query: 224 SRQYLLQTLRQNLLLQAAKKL-NCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF-- 280
SR LL + LL AA L N + ET T A ++I + G+G +PL++
Sbjct: 130 SRPTLLGHILDGLLTLAATTLPNVGVLLEGETSTRQAERVIGATAGGRGWALPLELATRL 189
Query: 281 -----------SDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSL-ATLADP--- 325
S T ++ ++P++D + KE Y + L V+ T+ +P
Sbjct: 190 PLTTSASSSDPSVKATTRVVRIKPMKDITVKEAAIYCRTSGLESVNERKWDGTVGEPRRD 249
Query: 326 ------LASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLD 379
AS++ E F+ L + PSTV+T+ RT +KL T N C LC+ P+D
Sbjct: 250 ARGKGAFASIEALTERFIATLNVSHPSTVNTINRTGNKLQFAGTPNNEQTRCPLCEMPVD 309
Query: 380 TRA 382
A
Sbjct: 310 DSA 312
>gi|226711449|sp|A2ZM73.1|CTU2_ORYSI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|125537219|gb|EAY83707.1| hypothetical protein OsI_38929 [Oryza sativa Indica Group]
Length = 464
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 33/308 (10%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C V + C C L KF+ A+ + M+RP D VL+AFSG +S
Sbjct: 47 CGKCGGGAAAVAVAGGLGLCGECFRANLLGKFKLAVTSNAMVRPTDSVLLAFSGGPASRV 106
Query: 124 LLHLLQ-------EGMQLSSHKRI-LFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
L + E +S+ + + +F V ++D+ + E I A++
Sbjct: 107 ALQFIHEMRCKAIESWDVSNSQALPVFGVGVAFVDESVLCSKPRDE-------IEMAIED 159
Query: 176 FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSE-----INKMFQTVTTLSSRQYLLQ 230
S + L ++ ++ DV F+ +SE + + + + R+ L+
Sbjct: 160 IRSIVSSLSTGVKAMHIVRLEDV-------FSTESEDGERRLREAVDMIGDDTGREDFLR 212
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT 290
LR L + A + KI + +A +++ G+G +P DV + D R +I
Sbjct: 213 CLRMLSLQKIAMENGYAKIMLGSCASAIACHVLSATVKGQGYSLPADVQYVDTRW-EIPV 271
Query: 291 LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVST 350
+ PLRD ++E+ + L + L P + SF+ L+ PS T
Sbjct: 272 VLPLRDCLAQELTLLCELDSLK-----TQQHLDRPSNGINSLVASFIKRLREENPSREHT 326
Query: 351 VFRTADKL 358
+ RTA KL
Sbjct: 327 IVRTAQKL 334
>gi|119174740|ref|XP_001239711.1| hypothetical protein CIMG_09332 [Coccidioides immitis RS]
Length = 371
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 134/302 (44%), Gaps = 32/302 (10%)
Query: 108 QDKVLVAFSGSHSSMALLHLLQEGM---QLSSHKRILFSVCAIYIDDGSISQVSISERKA 164
Q K+++ S SS+ALLH++ + + + KR F + + +D S+ +
Sbjct: 45 QRKLILPLSYGVSSLALLHIVSSLLLKQRTTGQKRTAFDLHVLIVDPVSLHPSKGAAASG 104
Query: 165 NNAQIATAMKYFDSYFTCLEQAL------EPDNMKLYTDVAELPL--EQFAKDSEINKMF 216
A+I A Y D+ ++ E L +PD + +PL D EI +F
Sbjct: 105 RLAKIKEA--YPDNTYS--EVPLRSIFDYDPDIRGDISQHTGIPLGSNPSRSDEEILNLF 160
Query: 217 Q-TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVP 275
+ + +T ++R + L + L++ AK C I ++ + LA K +AN++ G+G+ +
Sbjct: 161 RASFSTATARADIDGILLRRLIVAFAKSHKCDGILWGDSDSRLAAKTLANVAKGRGSSLV 220
Query: 276 LDV--GFSDDRTGDIITLRPLRDFSSKEVIYYNIF--NDLSPV---HVPSLATLADPLAS 328
+V G S DI PLRD E+ Y + DL + + L++ S
Sbjct: 221 WNVCEGMS---PWDIYFNFPLRDLYKSELEVYASYALRDLQQIIDQDPRNFEDLSNRHMS 277
Query: 329 LQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNT--CLLCKAPLDTRADLAS 386
++ +V +P ++ + RT DK LT+ V N C+LC+ P + AS
Sbjct: 278 IEDLMSQYVLTQGAKYPGVMANIVRTVDK----LTTPGVENAKMCILCRVPAGENLNAAS 333
Query: 387 SS 388
S
Sbjct: 334 GS 335
>gi|225561741|gb|EEH10021.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 381
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 155/362 (42%), Gaps = 32/362 (8%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQD-------KVLVAF 115
+C C ++R +D+ C+ C + ++ K + + + RPQ+ K+L+
Sbjct: 8 VCLDCKVAPATQIVRKRDL-CQECFILFIGSK---VVKRMEKYRPQNAPKNRQRKLLLPL 63
Query: 116 SGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
S SS LLH+L +QL +R + S D + V E+ ++ Y
Sbjct: 64 SYGISSSTLLHILN--LQL---ERQISSGLGRRAYDIHVLNVGTCEQSDSHRLGLFREAY 118
Query: 176 -FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKD-----SEINKMFQ-TVTTLSSRQYL 228
+Y ++ + + ++E +F D E +F+ +++T ++R +
Sbjct: 119 PLHTYTQVPLHSIFKHDTTIKDVISEYGGPEFVDDPSKTDQERLDIFRLSLSTATARADI 178
Query: 229 LQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDI 288
L L++ AK+ +C I ++ T LA+K ++N++ G+G VP DV G
Sbjct: 179 DGILLTRLVVAIAKEQDCDGILWGDSDTRLASKALSNVAKGRGFSVPWDVCDGMSPWGIQ 238
Query: 289 ITLRPLRDFSSKEVIYYNIFNDLSPVHV-----PSLATLADPLASLQKAAESFVTDLQTN 343
P+RD E+ Y ++V PS+ L++ S++ +V
Sbjct: 239 FNF-PMRDLFKFELSTYASLALPKSLNVVDSERPSVDNLSNKNTSIEDLLAHYVETQGQK 297
Query: 344 FPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATR 403
+P ++ + RT DKL S + + C+LC P+D + + +G S+Y R
Sbjct: 298 YPGVMANIVRTIDKLQPQ--SADTGHKCMLCGMPVDYSGE-DPAIIGGQGSSQYTLQDWR 354
Query: 404 EQ 405
E+
Sbjct: 355 ER 356
>gi|255954101|ref|XP_002567803.1| Pc21g07630 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589514|emb|CAP95660.1| Pc21g07630 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 369
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 148/334 (44%), Gaps = 23/334 (6%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR---PQDKVLVAFSG 117
+K C C E+ +R + + C C +++ HK ++ L + P+ ++L+ S
Sbjct: 7 NKPCMECKDAEFELTVRKRQL-CSLCFKRFIAHKVQSRLSVYRAFGLDGPKTQLLLPVSL 65
Query: 118 SHSSMALLHLLQEGMQ--LSSHKRILFSVCAIYIDDGSISQVSIS-----ERKANNAQIA 170
SS LLH+L Q L + + + + + I+ +++ I E N +
Sbjct: 66 GVSSSVLLHILNTDRQHRLDNGRPVGYDFKILVIEPSTVAATGIPFDQNYEALQKNFPMH 125
Query: 171 TAMKY-FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLL 229
T + F S F + + MK Y + + + + +++T +SR +
Sbjct: 126 TISRIPFHSIFDYAPEMV--GIMKEYAGSKFIDDSTRSNEERLAAFRASISTPTSRTDVD 183
Query: 230 QTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDII 289
L L+++ AKK C I ++ + LA K +A ++ G+G+ + V SD + +
Sbjct: 184 TVLLTRLIVEFAKKSGCESIIWGDSDSRLAAKALAGVAKGRGSSLTWQV--SDGMSPWGV 241
Query: 290 TLR-PLRDFSSKEVIYY-NIFNDLSPVHVPSLATLADPLA---SLQKAAESFVTDLQTNF 344
PLRD E++ Y ++ +LS V +P + L S+ + +V + +
Sbjct: 242 RFEYPLRDLYKAELLQYESVCAELSDVVIPDQPPSENVLTKNLSIDELMLRYVQNQGAKY 301
Query: 345 PSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
P ++ V RTA+K L+ ++ + TC LC + L
Sbjct: 302 PGVMANVARTANK--LNPSASDGAPTCALCASLL 333
>gi|242399147|ref|YP_002994571.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
gi|242265540|gb|ACS90222.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
Length = 331
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 128/336 (38%), Gaps = 45/336 (13%)
Query: 53 VVFSFSRADKL-CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKV 111
+ F F+ A K+ C +C YC + + K + + K +++ D++
Sbjct: 1 MFFPFTEARKMKCTKCGREAVYHARYEGKFYCHKHFNEMVESKVKQTVRKYGLIKRGDRI 60
Query: 112 LVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG----SISQVSISERKANNA 167
V SG S+ LLH+L +LS ++ F + AI ID+G V I++R A
Sbjct: 61 AVGVSGGKDSVVLLHILH---KLS--QKFPFEIIAITIDEGIEGYRPESVEIAKRNAKKL 115
Query: 168 QIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKM--FQTVTTLSSR 225
I + F Y F+ D ++ M F+ + +
Sbjct: 116 GIEHKIYSFKEYIG------------------------FSLDETVSIMGSFEKRERVGAC 151
Query: 226 QYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSD-DR 284
Y R+ L+ AA+ L K+ D + N+ G A + + +
Sbjct: 152 SY-CGVWRRWLINYAAQDLEADKLAVGHNLDDEVQMFLMNVMRGDVARLGRTGPYYEVIH 210
Query: 285 TGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNF 344
G + ++PLR+ KE++ Y I N++ + + + + ++ +++
Sbjct: 211 EGLVPRIKPLREVPEKEIVLYAILNNIE----VDFSECPYAVEAFRAEIRDWINEMEEKH 266
Query: 345 PSTVSTVFRTADKLSLDLTSMNVN---NTCLLCKAP 377
P T + R+ DK+ L N N C +C P
Sbjct: 267 PGTKYQILRSYDKMFPLLAKAYANRDLNRCKICDQP 302
>gi|242777604|ref|XP_002479068.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218722687|gb|EED22105.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 354
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 142/335 (42%), Gaps = 18/335 (5%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR--PQDKVLVAFSGSH 119
++C C +R + + C+ C ++Y HK +G + ++ P KVL+ S
Sbjct: 8 QVCVSCREVEALATIRSRPL-CRDCFIEYAGHKAARVMGSYRPVKNSPPKKVLLPLSLGI 66
Query: 120 SSMALLHLLQ--EGMQLS-SHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
SS +LLH++ + +QLS S F + + +D ++ ++ KAN +
Sbjct: 67 SSASLLHIVDRLQNLQLSRSLNTAGFDLHVLVVDPATV-HSGYADVKANFDSARESYPNH 125
Query: 177 DSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSE---INKMFQTVTTLSSRQYLLQTLR 233
L + D + + E + DS+ ++ +++T ++R + L
Sbjct: 126 TYTMVPLHNIFQYDTT-IKETLCEFGFVEGGFDSDKERLDAFRASMSTSTARDDIDNLLL 184
Query: 234 QNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRP 293
L++ AK +C I ++ + LA K +AN++ G+G + V G + P
Sbjct: 185 VRLIVAFAKSNDCQGILWGDSDSRLAAKTLANVAKGRGGSLTWQVCDGASPWGLNFSF-P 243
Query: 294 LRDFSSKEV-IYYNIFNDLSPVHVPSLATL---ADPLASLQKAAESFVTDLQTNFPSTVS 349
LR+ E+ +Y +L+ + +P L ++ S+ +V +P ++
Sbjct: 244 LRELYKFELELYVKQIPELASIIIPDLQIQENESNRNLSIDNLMNLYVKTQGEKYPGVMA 303
Query: 350 TVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADL 384
V RT +KL NV C LC AP+ A L
Sbjct: 304 NVVRTTNKLRPATIPQNVR--CSLCAAPVGGHASL 336
>gi|302903273|ref|XP_003048820.1| hypothetical protein NECHADRAFT_62936 [Nectria haematococca mpVI
77-13-4]
gi|256729754|gb|EEU43107.1| hypothetical protein NECHADRAFT_62936 [Nectria haematococca mpVI
77-13-4]
Length = 387
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 144/366 (39%), Gaps = 63/366 (17%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALG------KSKMMRPQDKVLVAF 115
+ C RC N LR KD C+ C +QY+ +K LG + + + L
Sbjct: 8 RPCKRCKAENAPFSLR-KDPACRDCFVQYVVNKMIKRLGAMHKDIRVSRLPVHRRYLAGL 66
Query: 116 SGSHSSMALLHLLQEGMQLSSHKRI--LFSVCAIYIDDGSISQVSISERKANNAQIATAM 173
S SS L +L E S + F ++ID Q + E A
Sbjct: 67 SFGPSSSVLAQILDETAHRHSTNKASSPFEPIIVHIDTDLSPQGA--ESPAKKLIDEYRQ 124
Query: 174 KYFDSYFTCLEQALEPDNMKLYT-DVAELPLEQFAKD----SEINKMFQTVTTLSSRQYL 228
++ + F C+ D + + + D + LPL+ D + + ++F + T++SR +
Sbjct: 125 RFPHATFECVPLT---DVLSVKSIDWSTLPLDAGTPDEDPAARLRRIFDALPTVTSRADI 181
Query: 229 LQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG-- 286
L+ L ++LLL A + +C+ + + T LA ++ ++ G+G VPL V +D T
Sbjct: 182 LRQLVRHLLLHTAIERSCSALLLGHSTTALAALTLSEVANGRGFAVPLQV--ADGMTAVC 239
Query: 287 ----------------DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATL-----ADP 325
+ PLR+ E++ Y DL VPSL + AD
Sbjct: 240 KYETTPDGAVQETSRLEFPVYYPLREIFRNEMLQY---IDL----VPSLKEVVPLNEADA 292
Query: 326 LA--------SLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAP 377
A S+++ + ++ + V+ V RT KL N+ C C
Sbjct: 293 TANVVSHKDMSIEEVMARYFQSVEEGYSGIVANVVRTTGKLDRS----QGNSFCGSCGMS 348
Query: 378 LDTRAD 383
LD D
Sbjct: 349 LDAEGD 354
>gi|261189565|ref|XP_002621193.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239591429|gb|EEQ74010.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239613040|gb|EEQ90027.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 381
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 40/365 (10%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRP-------QDKVLVAFS 116
C C +R +D+ C+ C ++ K + + + RP Q K L+ S
Sbjct: 9 CLDCKVAPATQTVRKRDL-CQQCFFLFIGSK---VVKRMEKYRPRNAEKNNQRKFLLPLS 64
Query: 117 GSHSSMALLHLL--QEGMQLSSH-KRILFSVCAIYIDDGSISQVS------ISERKANNA 167
SS LLH+L Q Q+SS R + + + + G Q E +
Sbjct: 65 YGVSSSTLLHILNLQLERQISSGLGRRTYEIHVLNV--GICGQPDNHRLDLFCEAYPLHT 122
Query: 168 QIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ-TVTTLSSRQ 226
+ Y T +E + + D +Q D E F+ +++T ++R
Sbjct: 123 YTQVPLHSIFKYDTAIEDIISEYGGPEFRD------DQSKMDQERLDHFRLSLSTAAART 176
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
+ L L++ AK+L+C I ++ T LA+K ++N++ G+G P DV D T
Sbjct: 177 DIDGILLTRLVVAIAKELDCDAILWGDSDTRLASKALSNVAKGRGFSAPWDV--CDGMTP 234
Query: 287 DIITLR-PLRDFSSKEVIYYNIFNDLSPVHV-----PSLATLADPLASLQKAAESFVTDL 340
I P+RD E+ Y ++V PS+ L+ S++ +V
Sbjct: 235 WGIQFNFPMRDVLKFELSTYASLALPKSLNVVDSERPSVDNLSSKNLSIEDLLAHYVETQ 294
Query: 341 QTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSN 400
+P ++ + RT DKL + + C+LC P+D + S++G + S+YV
Sbjct: 295 GEKYPGIMANIVRTIDKLQ--APAPDTGYKCVLCGMPVDMSGE-DPSALGGSGGSQYVLE 351
Query: 401 ATREQ 405
RE+
Sbjct: 352 DRRER 356
>gi|340506784|gb|EGR32855.1| hypothetical protein IMG5_068780 [Ichthyophthirius multifiliis]
Length = 400
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 39/297 (13%)
Query: 109 DKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQ 168
+ LV SG +S L HL+ + S +++ F IYID+ + + +++N +
Sbjct: 10 ENCLVCISGGANSTTLTHLVGNTIYNSQGRKMFFKAELIYIDESVLYENKY--KQSNLQK 67
Query: 169 IATAMKYFDSYFTCLEQALEPDNMKLYTDVAE-LPL----EQFAKDSEINKMFQTVTTLS 223
I K L + +Y D+ E +PL ++ D ++ K ++
Sbjct: 68 IEELAKKCQLKLNVLHLS------DIYNDLFEKIPLINEEQRTLFDQKLIKFLNLFKNVA 121
Query: 224 SRQY-LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSD 282
S Q ++Q ++ L ++ A K N +IF LA+KI + S G+G ++ F D
Sbjct: 122 SCQEDIVQFIKTQLYIEYAYKNNFNRIFLGSCGQRLASKIFSLFSKGRGGSADNEIQFID 181
Query: 283 ---------------DRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLAD--- 324
+ I RPL+DF +KEV+ Y NDL V + +
Sbjct: 182 WVEYEQMKNFFGSESEFQNKIGIGRPLKDFLNKEVLNYLHLNDLLGFLVDRPYYICENNK 241
Query: 325 ------PLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLT-SMNVNNTCLLC 374
++ E+F+ ++Q NF ST T+ T++K+ T + C LC
Sbjct: 242 QNSKLPGFGNIDFIMENFIDNIQENFCSTTHTILHTSEKIIKKFTPKEGILQRCPLC 298
>gi|448106457|ref|XP_004200752.1| Piso0_003349 [Millerozyma farinosa CBS 7064]
gi|448109572|ref|XP_004201383.1| Piso0_003349 [Millerozyma farinosa CBS 7064]
gi|359382174|emb|CCE81011.1| Piso0_003349 [Millerozyma farinosa CBS 7064]
gi|359382939|emb|CCE80246.1| Piso0_003349 [Millerozyma farinosa CBS 7064]
Length = 474
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 142/327 (43%), Gaps = 42/327 (12%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKM-------MRPQDKVLVAFS 116
C RC + +V R K+ +CK C L+++ K R + K +++L+AFS
Sbjct: 49 CKRCQAEDSVLVSR-KEPFCKKCFLRFIRGKQRRQMNHEKFKVKYNKTAEQPERILLAFS 107
Query: 117 GSHSSMALL----HLLQEGMQLSSHK-RILFSVCAIYIDDGS-------ISQVSISERKA 164
G SS+ LL LL+E ++ H+ R F + + ID+ + IS + S
Sbjct: 108 GGLSSLVLLDIMVSLLKEQKEM--HRDRQGFELLIVAIDESNLKAFQNNISDIITSLAAY 165
Query: 165 NNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMF--QTVTTL 222
+ QI + +++F D+ L T + + + +K + Q + +
Sbjct: 166 MDFQINYKILDINNFFA--------DSHLLKTITIDEDYSAWCSSIQHDKTYTYQDIVNM 217
Query: 223 ----SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV 278
SS + +L + LLL A+ +C I A + T LA +++A I G+GA V V
Sbjct: 218 CPDKSSTEDVLSIIFSKLLLTTAEAESCQTIIYANSMTRLANEVLAMIVRGRGAEVHQKV 277
Query: 279 GFSDDRTG--DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLA---SLQKAA 333
S + +I + PLRD EV Y L + + + + +++
Sbjct: 278 SDSVQKYNGKEIEVIFPLRDVLFAEVEAYAQLTGLESYMLQEVNPKSGKIVRNMTVRDLT 337
Query: 334 ESFVTDLQ-TNFPSTVSTVFRTADKLS 359
+ +L T + ST STV +TA+KL
Sbjct: 338 TGYFKNLDATGYASTASTVVKTAEKLG 364
>gi|407416233|gb|EKF37632.1| hypothetical protein MOQ_002173 [Trypanosoma cruzi marinkellei]
Length = 534
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 138/344 (40%), Gaps = 53/344 (15%)
Query: 63 LCPRCNTNNGEVVLRLKD----IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGS 118
+C +C + G V R +D YC C +++ + R L K M + + VA SG
Sbjct: 3 VCFKCRQSQG--VFRSRDGATKPYCVECFVEFCTRQVRDNLFKHCGMPCEVPLAVAVSGG 60
Query: 119 HSSMALLHLL-----QEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQ----- 168
HSSM++LH L Q M+ ++ F ++ + + ++E NA+
Sbjct: 61 HSSMSILHQLGVLRAQNRMR-PERGQVTFIFIPFHLREDELVLPLLAEEAKGNAKDPRQE 119
Query: 169 ----IATAM-KYFDSYFT-----CLEQALEPDNMKLYTDVAELPLEQFAKDSEINK---- 214
+A +M + F+ T C + + + +V + + E+
Sbjct: 120 ELRCVAASMAEQFEKLETMIRTQCTQWEFASIPLFMEGEVCVVRYSDYLSPGELQAFRRV 179
Query: 215 MFQTVTTLSSRQYLLQTLRQNLLLQAA----------KKLNCT----KIFTAETQTDLAT 260
+ + +LS R+ L + LRQ +L AA ++ CT + T E
Sbjct: 180 LHHSRLSLSDRELLYERLRQRVLTAAALECIHRWHRTRQSTCTVGWYHLLTGENALRCCM 239
Query: 261 KIIANISLGKG---AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVP 317
+ G G H+ GF G + LRPLR+ E++ Y + + P
Sbjct: 240 TTLREFMSGNGQNAVHLSGYRGF----VGQCLVLRPLRNMLPHELVMYCRTQGIQAAYSP 295
Query: 318 SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLD 361
SL+T L S+ + E F ++ + ++V V T +KL ++
Sbjct: 296 SLSTQTS-LRSMNRTLELFFNNMLRTYRTSVFNVLNTVNKLHVE 338
>gi|121713838|ref|XP_001274530.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
gi|226711434|sp|A1CBI6.1|CTU2_ASPCL RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|119402683|gb|EAW13104.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
Length = 374
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 140/336 (41%), Gaps = 29/336 (8%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQD-----KVLVAFSGS 118
C C + +R + + C+ C +++N K + ++ R K+L+ S
Sbjct: 10 CVDCADAEAILTVRCRRL-CQDCYARFVNFKVFKRMENYRLRRNMSRTGPCKLLLPLSYG 68
Query: 119 HSSMALLHLLQEGMQ---LSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
SS LLH+L +Q SH F + + I+ ++S S ++ +
Sbjct: 69 TSSSVLLHILNAQIQHERAKSHPSPGFELHVLVIEPSTVSTSS----PPHDEGFDLLQQT 124
Query: 176 FDSY-FT--CLEQALEPDNMKLYTDVAELPLEQFAKDS------EINKMFQTVTTLSSRQ 226
F S+ FT L E D + +++ E F D+ ++ ++TT +SR
Sbjct: 125 FPSHSFTRVSLHNVFELDP-SIQDVLSQFSSEGFTDDATMSDKDRLDAFRASITTATSRV 183
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
+ L L++ AKK+ C + ++ T LA K +AN++ G+G+ + V G
Sbjct: 184 DVDYILITRLVVAFAKKIECRGVVWGDSDTRLAAKTLANVAKGRGSAITWQVCDGMSPFG 243
Query: 287 DIITLRPLRDFSSKEVI-YYNIFNDLSPVHVPSLATLADPLA---SLQKAAESFVTDLQT 342
+ PLRD EV Y + F +L+ + +P + L S+ + +V
Sbjct: 244 LEFSF-PLRDLYKAEVQNYASFFPELAKIIIPDEPPSENILTKNLSIDELMMRYVQTQGE 302
Query: 343 NFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
+P ++ V RTA KL L NV C C +
Sbjct: 303 KYPGIMANVTRTASKLQASLVPANVPR-CSFCGGSM 337
>gi|393241436|gb|EJD48958.1| hypothetical protein AURDEDRAFT_161896 [Auricularia delicata
TFB-10046 SS5]
Length = 403
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 135/331 (40%), Gaps = 54/331 (16%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDK-----VLVAFS 116
+ C +C + G +V+R +YCK C +++ KFR + + +P+ + + +AFS
Sbjct: 19 RTCNKCKSVPGAIVVR-HYVYCKDCFFAHVHAKFRKVMPARETYKPRSEPGDPPLTLAFS 77
Query: 117 GSHSSMALLHLLQEGMQLSSHKRILF-SVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
+ LL L+ + +++++ + AIY++ + +S+R + ++ +
Sbjct: 78 AGLGASVLLDLVARTYRREGARKLVWDPITAIYVETCAAYD-GVSDRTEHIREVLGSYTG 136
Query: 176 FDSYFTCLEQALEPDNMKLYTDVA----ELP-----LEQFAKDSEINKMFQTVTTLSSRQ 226
+E A +P + + V+ LP + ++ + T S+R
Sbjct: 137 VRLVAARIEDAFKPRDGEPLLAVSLADERLPTLSPSSPASSPTDALHAYLDAMHTPSARI 196
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
+++L L+++AA I T LA +IA ++ G G + T
Sbjct: 197 TAIESLVYALIMRAAPSRG--PILFGTQLTALAVTLIAGVAHGAGFTL----------TP 244
Query: 287 DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPS 346
+RPL+D +KE AD + L + F+T L +FPS
Sbjct: 245 PPRVVRPLQDVGAKEC--------------------ADSITGLTR---EFMTRLDRDFPS 281
Query: 347 TVSTVFRTADKLSLDLTSMNVNNTCLLCKAP 377
TVS V RT K+ C LC+ P
Sbjct: 282 TVSAVARTCAKVVPRRD--QTGQLCALCERP 310
>gi|238879815|gb|EEQ43453.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 452
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 166/393 (42%), Gaps = 40/393 (10%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL---------GKSKMMRPQDKVL 112
++C +C T N V R++ + C C ++++ K R + G++ ++L
Sbjct: 12 EICQKCKTENAVVHARVEKL-CSNCYIRFIRGKLRKQMHDERYKVKFGRAVEQYGTQRIL 70
Query: 113 VAFSGSHSSMALL----HLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER------ 162
+A SG SS+ LL LLQE +L K+ F + + +D+ + S++ R
Sbjct: 71 LALSGGESSLVLLDIFGSLLQEQNELHKGKQ-GFELVVVNLDEYELD--SLNNRIQKVFP 127
Query: 163 ----KANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQT 218
K +I+ + DSY E++L + L D + + ++ +
Sbjct: 128 ELLAKYQPVKISLNVLSLDSYVD--EESLH--RILLTPDFRAMSKSIDPTRVTLTEILRL 183
Query: 219 VTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV 278
SS + LL + +L+L+ A K +C + T LA +IIA G+G+ + +
Sbjct: 184 CPNKSSAEDLLTIVYNDLILRVAAKEDCQTVVYGHCMTRLANEIIALTVKGRGSIIHKSI 243
Query: 279 GFSDDRTGD--IITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLA--TLADPLASLQKAAE 334
+ D I + PLR+ E+ Y +L+ + S + + +++
Sbjct: 244 ADHTETIDDKEIKVMFPLREILQAEISAYVKLAELNKYVISSTVQKSKINKNLTIRDLTT 303
Query: 335 SFVTDLQ-TNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATR 393
++ L T + ST STV +T +KL + NV C +C A + + T
Sbjct: 304 NYFKQLDATGYASTASTVAKTGEKLG---SPSNVLCQCQICGADIHQNPSNWLKRITVTD 360
Query: 394 FSRYVSNATREQLSHVIISSESPDHASKVTTDV 426
+ ++ +E + +S SPD+ K +D+
Sbjct: 361 PAAITTDEEKEYY-EMFRASLSPDNEDKTNSDI 392
>gi|170099551|ref|XP_001880994.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644519|gb|EDR08769.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 510
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 20/254 (7%)
Query: 176 FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYL---LQTL 232
FD LE A +++ + V EL + I + +++L ++ + QTL
Sbjct: 180 FDFIPLRLEDAF---DLEWWKGVGELLFTPPPSSTPILALQAYLSSLPTQTAIHSATQTL 236
Query: 233 RQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV-------GFSDDRT 285
+ LLL A + + + T L+ +I+ I+ G G V + G S + T
Sbjct: 237 VRLLLLYTAASRRASHVLLGTSLTSLSVNLISGIAQGAGFSVAEEAMEEWRGEGKSGELT 296
Query: 286 GDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFP 345
I +RPLRD KE + + L V + SL + +F+T L+ ++P
Sbjct: 297 PPIRIVRPLRDVGMKECAIWAWWCGLRIVGRERYLGGTQGIGSLTR---NFITGLERDYP 353
Query: 346 STVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRY-VSNATRE 404
+TVST+ RT KL+ S + CLLC+ P S ++ S++ E
Sbjct: 354 ATVSTIARTCAKLTPKEGS---DGVCLLCQRPAQHGVQEWKSRTSIRSYNHASFSSSGHE 410
Query: 405 QLSHVIISSESPDH 418
+ H+ +++ P H
Sbjct: 411 RPPHLANATDRPQH 424
>gi|226294150|gb|EEH49570.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 376
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 157/378 (41%), Gaps = 66/378 (17%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQD-------KVLVAF 115
+C C + +R +++ C+ C + ++ K + K RPQ+ K+L+
Sbjct: 3 ICMDCKVASVTQTVRKREL-CQQCFILFIGSKVVKRIEK---YRPQNAPKDRQRKLLLPL 58
Query: 116 SGSHSSMALLHLLQ--------EGMQLSSHKRILFSVCAIY--IDDGSISQVSISERKAN 165
S SS +LLH+L G+ ++ + +V A+Y D G + +
Sbjct: 59 SFGVSSSSLLHILNLQLERQISNGIGRRAYDIHVLNV-AVYGQPDSGRLDLFRETYPLHT 117
Query: 166 NAQIA--------TAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
+Q+ TA+K S + C E +P TD AEL +N
Sbjct: 118 YSQVPLHSIFQYDTAIKDVISEYGCPEFVGDPS----MTD-AEL----------LNLFLS 162
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLD 277
+ ++ +SR + + L++ AK+ NC I ++ + LA+K ++N++ G+G D
Sbjct: 163 SPSSATSRTDIGAIIFTRLVVAFAKEHNCDGILWGDSDSRLASKALSNVAKGRGFSASCD 222
Query: 278 VGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL----------- 326
V G PLRD E+ Y + V +P +ADP
Sbjct: 223 VCDGMSPWGIQFNF-PLRDLFKFELSTY------ASVALPKSLIVADPERLSMDNLTNKN 275
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLAS 386
S++ +V +P ++ + RT DK L++ + + C+LC P+D + +
Sbjct: 276 MSIENLLAHYVETQGEKYPGIMANIVRTIDK--LNVPPGDAGSKCILCSMPVDNSGEDPA 333
Query: 387 SSMGATRFSRYVSNATRE 404
+ +G T S+YV RE
Sbjct: 334 NPVG-TECSQYVLKDHRE 350
>gi|225684492|gb|EEH22776.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 376
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 158/378 (41%), Gaps = 66/378 (17%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQD-------KVLVAF 115
+C C + +R +++ C+ C + ++ K + + + RPQ+ K+L+
Sbjct: 3 ICMDCKVASVTQTVRKREL-CQQCFILFIGSK---VVKRMEKYRPQNAPKDRQRKLLLPL 58
Query: 116 SGSHSSMALLHLLQ--------EGMQLSSHKRILFSVCAIY--IDDGSISQVSISERKAN 165
S SS +LLH+L G+ ++ + +V A+Y D G + +
Sbjct: 59 SFGVSSSSLLHILNLQLERQISNGIGRRAYDIHVLNV-AVYGQPDSGRLDLFRETYPLHT 117
Query: 166 NAQIA--------TAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
+Q+ TA+K S + C E +P TD AEL +N
Sbjct: 118 YSQVPLHSIFQYDTAIKDVISEYGCPEFVGDPS----MTD-AEL----------LNLFLS 162
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLD 277
+ ++ +SR + + L++ AK+ NC I ++ + LA+K ++N++ G+G D
Sbjct: 163 SPSSATSRTDIGAIIFTRLVVAFAKEHNCDGILWGDSDSRLASKALSNVAKGRGFSASCD 222
Query: 278 VGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL----------- 326
V G PLRD E+ Y + V +P +ADP
Sbjct: 223 VCDGMSPWGIQFNF-PLRDLFKFELSTY------ASVALPKSLIVADPERLSMDNLTNKN 275
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLAS 386
S++ ++ +P ++ + RT DK L++ + + C+LC P+D + +
Sbjct: 276 MSIENLLAHYIETQGEKYPGIMANIVRTIDK--LNVPPGDAGSKCILCSMPVDNSGEDPA 333
Query: 387 SSMGATRFSRYVSNATRE 404
+ +G T S+YV RE
Sbjct: 334 NPVG-TECSQYVLKDHRE 350
>gi|390961162|ref|YP_006424996.1| putative ATPase 2 [Thermococcus sp. CL1]
gi|390519470|gb|AFL95202.1| putative ATPase 2 [Thermococcus sp. CL1]
Length = 323
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 120/326 (36%), Gaps = 46/326 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +CN YC + + KF+ + K +++ +++ V SG S+
Sbjct: 3 CSKCNRPAVYHARYTGRYYCHRHFNEMVEKKFKETVKKYRLIEKGERIAVGVSGGKDSVV 62
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSIS----QVSISERKANNAQIATAMKYFDSY 179
LLHLL + ++ F + A+ ID+G V I+ R A I + F Y
Sbjct: 63 LLHLLAK-----LREKFPFELVAVTIDEGIAGYRPPSVEIARRNAEKLGIEHRIYSFKEY 117
Query: 180 --FTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLL 237
FT E EI F+ + + Y R+ LL
Sbjct: 118 IGFTLDETV------------------------EIMGSFERGERVGACSY-CGVWRRWLL 152
Query: 238 LQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDII-TLRPLRD 296
AAK + K+ D I NI G A + + ++ +++ ++PLR+
Sbjct: 153 NYAAKDVEADKLAVGHNLDDEVQMFIMNILRGDIARLGRTGPYYEEIHPELVPRIKPLRE 212
Query: 297 FSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
KE++ Y + N + L+ + + + ++ +++ P T + R+ D
Sbjct: 213 IPEKEIVLYAVLNGIE----VDLSECPYAVEAFRAEIRDWLNEMEERHPGTKYQILRSYD 268
Query: 357 KLSLDLTSMNVN-----NTCLLCKAP 377
KL + N C +C P
Sbjct: 269 KLFPLIAKTYTKKTSELNRCRICGQP 294
>gi|407852765|gb|EKG06093.1| hypothetical protein TCSYLVIO_002825 [Trypanosoma cruzi]
Length = 537
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 133/345 (38%), Gaps = 54/345 (15%)
Query: 63 LCPRCNTNNGEVVLRLKD----IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGS 118
+C +C + G V R +D YC C +++ + R L K M + + VA SG
Sbjct: 3 VCFKCKQSQG--VFRSRDGATKPYCADCFVEFCTRQIRDNLFKHCGMPCEVPLAVAVSGG 60
Query: 119 HSSMALLHLL-----QEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI---- 169
HSSM++ H L Q M+ ++ F+ ++ + + ++E NA +
Sbjct: 61 HSSMSIFHQLGVLRAQNRMRPEC-GQVTFTFIPFHLREDELVLPLLAEEAEENAGVDPRQ 119
Query: 170 -------ATAMKYFDSYFT-----CLEQALEPDNMKLYTDVAELPLEQFAKDSEINK--- 214
A+ + F+ T C + + +V + + E+
Sbjct: 120 EELRCVAASMTEQFEKLETMIRTQCTQWKFASTPLFAEGEVCVVRYSDYLSPGELQAFRG 179
Query: 215 -MFQTVTTLSSRQYLLQTLRQNLLL--------------QAAKKLNCTKIFTAETQTDLA 259
+ + +LS R+ L + LRQ +L+ QA + + T E
Sbjct: 180 VLHHSRLSLSDRELLYERLRQRVLMAAALECIHRWHRTRQAPSAVGWYHLLTGENALRCC 239
Query: 260 TKIIANISLGKG---AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV 316
+ + G G H+ GF G + LRPLR E++ Y + +
Sbjct: 240 MTTLREVMSGNGQNTVHLSGYRGF----VGQCLVLRPLRTMLPHELVMYCRTQGIHAAYS 295
Query: 317 PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLD 361
PSL+T L S+ + E F ++ + ++V V T +KL ++
Sbjct: 296 PSLSTQTS-LRSMNRTLELFFNNMLRTYRTSVFNVLNTVNKLHVE 339
>gi|223477482|ref|YP_002581731.1| PP-loop superfamily ATPase [Thermococcus sp. AM4]
gi|214032708|gb|EEB73537.1| ATPase, PP-loop superfamily [Thermococcus sp. AM4]
Length = 325
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 118/308 (38%), Gaps = 46/308 (14%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
YC + + KF+ + K +++ +++ V SG S+ L+HLL + ++
Sbjct: 23 YCHKHFNEMVEKKFKETVKKYRLIEKGERIAVGVSGGKDSVVLMHLLAK-----LREKFP 77
Query: 142 FSVCAIYIDDGSIS----QVSISERKANNAQIATAMKYFDSY--FTCLEQALEPDNMKLY 195
F + AI ID+G V I++R A I + F Y FT E
Sbjct: 78 FELVAITIDEGIAGYRPPSVEIAKRNAKKLGIEHRIYSFKEYIGFTLDETV--------- 128
Query: 196 TDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQ 255
EI F+ + + Y R+ LL AAK + K+
Sbjct: 129 ---------------EIMGSFEKGERVGACSY-CGVWRRWLLNYAAKDVGADKLAVGHNL 172
Query: 256 TDLATKIIANISLGKGAHVPLDVGFSDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSPV 314
D I NI G A + + ++ +++ ++PLR+ KE++ Y + N++
Sbjct: 173 DDEVQMFIMNILRGDIARLGRTGPYYEEIHPELVPRIKPLREIPEKEIVLYAVLNNIE-- 230
Query: 315 HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN-----N 369
L+ + + + ++ +++ P T + R+ DKL + N
Sbjct: 231 --VDLSECPYAVEAFRAEIRDWLNEMEERHPGTKYQILRSYDKLFPLIAKTYTKRTSELN 288
Query: 370 TCLLCKAP 377
C +C P
Sbjct: 289 RCKICGQP 296
>gi|294658897|ref|XP_461239.2| DEHA2F20504p [Debaryomyces hansenii CBS767]
gi|226711459|sp|Q6BKN2.2|CTU2_DEBHA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|202953471|emb|CAG89627.2| DEHA2F20504p [Debaryomyces hansenii CBS767]
Length = 448
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 141/332 (42%), Gaps = 50/332 (15%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYL---------NHKFRAALGKSKMMRPQDKVLVA 114
C RC T ++ R K+ +CK C ++++ + K++ GK++ P KVL+
Sbjct: 16 CSRCKTETAILISR-KEKFCKDCFVRFIRGKQRKQMQDEKYKVKYGKNEENSPVQKVLLT 74
Query: 115 FSGSHSSMALLHLLQEGM--QLSSHK-RILFSVCAIYIDDGSISQVSISER--------K 163
S SS+ L+ ++ + Q HK + F + + I++ + + S + +
Sbjct: 75 LSCGVSSLVLVDVMTSLLKEQFDMHKGKQGFELVLLNINEYELKALDRSVKDVLEQLVQR 134
Query: 164 ANNAQIATAMKYFDSYF---TCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVT 220
I + +SY + LE+ + + Y+ +D ++++
Sbjct: 135 FKPINITYKILSLESYVLDQSLLEKIVLNGDFTAYSQSI-----HHDRDYTLSEVLDLCP 189
Query: 221 TLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF 280
SS + LL + L+L+ A +C I + T +A +IIA G+G+ + V
Sbjct: 190 NKSSLEDLLTIIYDELILRTACLESCETILYGHSMTRIANEIIALTVKGRGSSIYQTV-- 247
Query: 281 SDD----RTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESF 336
SD R D + PLRD E++ Y+ ++L V S P++ + K
Sbjct: 248 SDHSVNFRNKDYKIIFPLRDVLFAEILAYSKLSELDTFAVES----TKPVSKITKNMT-- 301
Query: 337 VTDLQTN---------FPSTVSTVFRTADKLS 359
+ DL TN + ST STV +T DKL
Sbjct: 302 IRDLTTNYFNQLDATGYASTASTVVKTGDKLG 333
>gi|71415908|ref|XP_810004.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70874472|gb|EAN88153.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 537
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 134/345 (38%), Gaps = 54/345 (15%)
Query: 63 LCPRCNTNNGEVVLRLKD----IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGS 118
+C +C + G V R +D YC C +++ + R L K M + + VA SG
Sbjct: 3 VCFKCKQSQG--VFRSRDGATKPYCADCFVEFCTRQIRDNLFKHCGMPCEVPLAVAVSGG 60
Query: 119 HSSMALLHLL-----QEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI---- 169
HSSM++LH L Q M+ ++ F+ ++ + + ++E NA +
Sbjct: 61 HSSMSILHQLGVLRAQNRMRPEC-GQVTFTFIPFHLREDELVLPLLAEEAEENAGVDPRQ 119
Query: 170 -------ATAMKYFDSYFT-----CLEQALEPDNMKLYTDVAELPLEQFAKDSEINK--- 214
A+ + F+ T C++ + +V + + E+
Sbjct: 120 EELRCVAASMTEQFEKLETMIRTQCVQWKFASAPLFAEGEVCVVRYSDYLSPGELQAFRG 179
Query: 215 -MFQTVTTLSSRQYLLQTLRQNLLL--------------QAAKKLNCTKIFTAETQTDLA 259
+ + +LS R+ L + LRQ +L QA + + T E
Sbjct: 180 VLHHSRLSLSDRELLYERLRQRVLTAAALECIHRWHRTRQAPSAVGWYHLLTGENALRCF 239
Query: 260 TKIIANISLGKG---AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV 316
+ + G G H+ GF G + LRPLR E++ Y + +
Sbjct: 240 MTTLREVMSGNGQNTVHLSGYRGF----VGQCLVLRPLRTMLPHELVMYCRTQGIHAAYS 295
Query: 317 PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLD 361
PSL+T L S+ + E F ++ + ++V V T +KL ++
Sbjct: 296 PSLSTQTS-LRSMNRTLELFFNNMLRTYRTSVFNVLNTVNKLHVE 339
>gi|443895096|dbj|GAC72442.1| hypothetical protein PANT_7c00103 [Pseudozyma antarctica T-34]
Length = 674
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 24/157 (15%)
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPL---DVGFSDDR 284
L + L Q LL +AA++ +C + ++ T ++ +++ +++ G G + + D + DD
Sbjct: 307 LHRVLIQTLLRRAARQYDCAALLLGDSATRISIRLMEDLAKGAGHKLAVQGSDAAWIDD- 365
Query: 285 TGDIITLRPLRDFSSKEVIYYNIFNDLSPVH-----VPSLATLADPLA------------ 327
+ +RPL+ +EV++Y L + VP L + AD LA
Sbjct: 366 ---TLVVRPLKSHLMQEVLFYTSALGLESLETEQHIVPPLVSTADILANRDANVPTMDKS 422
Query: 328 SLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTS 364
S+ + E+F+ +L+ PSTVST+ +T KL L+ TS
Sbjct: 423 SIARLTETFILNLEKGVPSTVSTIGKTGSKLVLNPTS 459
>gi|240102078|ref|YP_002958386.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
gi|239909631|gb|ACS32522.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
Length = 325
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 117/308 (37%), Gaps = 46/308 (14%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
YC + + KF+ + K +++ +++ V SG S+ L+HLL + ++
Sbjct: 23 YCHKHFNEMVEKKFKETVKKYRLIEKGERIAVGVSGGKDSVVLMHLLAK-----LREKFP 77
Query: 142 FSVCAIYIDDGSIS----QVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTD 197
F + AI ID+G V I++R A I + F Y
Sbjct: 78 FELVAITIDEGIAGYRPKSVEIAKRNARKLGIEHRIYSFKEYIG---------------- 121
Query: 198 VAELPLEQFAKDSEINKM--FQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQ 255
F D + M F+ + + Y R+ LL AAK + K+
Sbjct: 122 --------FTLDETVGIMGSFERGERVGACSY-CGVWRRWLLNYAAKDVGADKLAVGHNL 172
Query: 256 TDLATKIIANISLGKGAHVPLDVGFSDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSPV 314
D I NI G A + + ++ +++ ++PLR+ KE++ Y + N++
Sbjct: 173 DDEVQMFIMNILRGDIARLGRTGPYYEEIHPELVPRIKPLREIPEKEIVLYAVLNNIE-- 230
Query: 315 HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN-----N 369
L+ + + + ++ +++ P T + R+ DKL + N
Sbjct: 231 --VDLSECPYAVEAFRAEIRDWLNEMEERHPGTKYQILRSYDKLFPLIAKTYTKKTSELN 288
Query: 370 TCLLCKAP 377
C +C P
Sbjct: 289 RCKICGQP 296
>gi|71649714|ref|XP_813571.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878467|gb|EAN91720.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 537
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 133/345 (38%), Gaps = 54/345 (15%)
Query: 63 LCPRCNTNNGEVVLRLKD----IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGS 118
+C +C + G V R +D YC C +++ + R L K M + + VA SG
Sbjct: 3 VCFKCKQSQG--VFRSRDGATKPYCADCFVEFCTRQIRDNLFKHCGMPCEVPLAVAVSGG 60
Query: 119 HSSMALLHLL-----QEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI---- 169
HSSM++LH L Q M+ ++ F+ ++ + + +++ NA +
Sbjct: 61 HSSMSILHQLGVLRAQNRMRPEC-GQVTFTFIPFHLREDELVLPLLADEAEENAGVDPRQ 119
Query: 170 -------ATAMKYFDSYFT-----CLEQALEPDNMKLYTDVAELPLEQFAKDSEINK--- 214
A+ + F+ T C + + +V + + E+
Sbjct: 120 EELRCVAASMTEQFEKLETMIRTQCTQWKFASTPLFAEGEVCVVRYSDYLAPGELQAFRG 179
Query: 215 -MFQTVTTLSSRQYLLQTLRQNLLL--------------QAAKKLNCTKIFTAETQTDLA 259
+ + +LS R+ L + LRQ +L QA + + T E
Sbjct: 180 VLHHSRLSLSDRELLYERLRQRVLTAAALERIHRWHRTRQAPSAVGWYHLLTGENALRCC 239
Query: 260 TKIIANISLGKG---AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV 316
+ + G G H+ GF G + LRPLR E++ Y + +
Sbjct: 240 MTTLREVMSGNGQNTVHLSGYRGF----VGQCLVLRPLRTMLPHELVMYCRTQGIHAAYS 295
Query: 317 PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLD 361
PSL+T L S+ + E F ++ + ++V V T +KL L+
Sbjct: 296 PSLSTQTS-LRSMNRTLELFFNNMLRTYRTSVFNVLNTVNKLHLE 339
>gi|341582453|ref|YP_004762945.1| PP family ATPase [Thermococcus sp. 4557]
gi|340810111|gb|AEK73268.1| PP family ATPase [Thermococcus sp. 4557]
Length = 323
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 118/306 (38%), Gaps = 42/306 (13%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
YC+ + + KF+ + + +++ +++ V SG S+ L+HLL + ++
Sbjct: 21 YCRKHFNELVERKFKETVKRYRLIEKGERIAVGVSGGKDSVVLMHLLAK-----LREKFP 75
Query: 142 FSVCAIYIDDGSIS----QVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTD 197
F + AI ID+G V I++R A I + F Y M D
Sbjct: 76 FELIAITIDEGIAGYRPPSVEIAKRNAEKLGIEHRVYSFKEY------------MGFTLD 123
Query: 198 VAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
+ EI F+ + + Y R+ LL AAK + K+ D
Sbjct: 124 ----------ETVEIMGSFEKGERVGACSY-CGVWRRWLLNYAAKDVEADKLAVGHNLDD 172
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSPVHV 316
+ NI G A + + ++ +++ ++PLR+ KE++ Y + N++
Sbjct: 173 EVQMFVMNILRGDVARLGRTGPYYEEIHPELVPRIKPLREIPEKEIVLYAVLNNIE---- 228
Query: 317 PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN-----NTC 371
+ + + + ++ +++ P T + R+ DKL + N C
Sbjct: 229 VDFSECPYAVEAFRAEIRDWINEMEERHPGTKYQILRSYDKLFPLIARTYTKRTSELNRC 288
Query: 372 LLCKAP 377
+C P
Sbjct: 289 KICGQP 294
>gi|268323619|emb|CBH37207.1| conserved hypothetical protein, PP-loop family [uncultured
archaeon]
Length = 302
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 122/297 (41%), Gaps = 43/297 (14%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
C+ + + K + A+ K M+ D++ VA SG S ALL++L+E + H R
Sbjct: 24 CEPHFIADVERKVKKAMRKQLMIEYGDRIAVALSGGKDSSALLYMLKEKI---FHDRNDL 80
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
AI +D+G S + R A + + LE D +Y+ E
Sbjct: 81 EFFAIAVDEGIKGFRSATLRNAER----------------VAKELEIDCF-IYSFAHEF- 122
Query: 203 LEQFAKDSEINKMF-QTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATK 261
F D + K F Q T LR+ +L AK++ TK+ TA D
Sbjct: 123 --GFTLDEIVAKGFDQAPCTFCG------VLRRRILDVKAKEMGATKVVTAHNLDDEVQT 174
Query: 262 IIANISLGKGAHVPLDVGFSDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSPVHVPSLA 320
I+ N G + G R + + ++PLRD KE Y + + P+H
Sbjct: 175 ILINYLRGDIERL----GRLQGRRAEFVPRVKPLRDVYEKEAALYALVAGI-PIH----- 224
Query: 321 TLADPLASL--QKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCK 375
T+ P ASL + +S + +L+ P T ++ R +++S L ++ L C+
Sbjct: 225 TIHCPYASLSFRSTVKSMLNELERKHPGTKYSLLRGYERVSEFLPAVQTERKLLRCE 281
>gi|119478843|ref|XP_001259457.1| hypothetical protein NFIA_074800 [Neosartorya fischeri NRRL 181]
gi|226711448|sp|A1DDV3.1|CTU2_NEOFI RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|119407611|gb|EAW17560.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 370
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 143/345 (41%), Gaps = 51/345 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR--PQD---KVLVAFSGS 118
C C+ + LR + + C+ C +++N K + ++ R P+ K+L+ S
Sbjct: 10 CVDCSDAEAILTLRTRRL-CQTCYARFVNFKVFKRMENYRLRRNMPKTGPCKLLLPLSCG 68
Query: 119 HSSMALLHLLQEGMQLS---SHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
SS LLH+L +QL SH F + + I+ + I+ +
Sbjct: 69 ISSSVLLHILNAQIQLELAKSHPSPGFDLHVLVIE---------------PSSISHSSPS 113
Query: 176 FDSYFTCLEQALEPDNM---------KLYTDVAELPLEQFAKDS-----------EINKM 215
+D F L+Q + +L ++ E+ + QF+KD ++
Sbjct: 114 YDEGFGLLQQTFPLHSFTRIPLHSIFELDPELQEV-ISQFSKDGFVDDAGLSAKERLDAF 172
Query: 216 FQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVP 275
++ T +S+ + L L++ AKK+ C + ++ T LA K +AN++ G+G+ +
Sbjct: 173 RASIPTSTSKVDVDYVLITRLVVAFAKKIACRGVLWGDSDTRLAAKTLANVAKGRGSSLT 232
Query: 276 LDVGFSDDRTGDIITLRPLRDFSSKEVI-YYNIFNDLSPVHVPSLATLADPLA---SLQK 331
V G PLRD EV Y + F +L+ + +P + L S+ +
Sbjct: 233 WQVCDGMSPFGVEFNF-PLRDLFKAEVDNYASFFPELTRIIIPDEPPSENVLTKNLSIDE 291
Query: 332 AAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKA 376
+V +P ++ V RTA KL LT NV C C A
Sbjct: 292 LMMRYVQTQGEKYPGVMANVTRTASKLQASLTPANVPQ-CSFCGA 335
>gi|57641756|ref|YP_184234.1| PP family ATPase [Thermococcus kodakarensis KOD1]
gi|57160080|dbj|BAD86010.1| ATPase, PP-loop superfamily [Thermococcus kodakarensis KOD1]
Length = 323
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 118/308 (38%), Gaps = 46/308 (14%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
YCK + + KF+ + K +++ +++ V SG S+ L+HLL + ++
Sbjct: 21 YCKKHFNEMVEKKFKETVKKYRLIEKGERIAVGVSGGKDSVVLMHLLAK-----LREKFP 75
Query: 142 FSVCAIYIDDGSIS----QVSISERKANNAQIATAMKYFDSY--FTCLEQALEPDNMKLY 195
F + AI ID+G V I++R A I + F Y FT E
Sbjct: 76 FELVAITIDEGIAGYRPPSVEIAKRNAKKLGIEHRIYSFKEYIGFTLDETV--------- 126
Query: 196 TDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQ 255
EI F+ + + Y R+ LL AA + K+
Sbjct: 127 ---------------EIMGSFEKGERVGACSY-CGVWRRWLLNYAAMDVGADKLAVGHNL 170
Query: 256 TDLATKIIANISLGKGAHVPLDVGFSDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSPV 314
D + NI G A + + ++ +++ ++PLR+ KE++ Y + N++
Sbjct: 171 DDEVQMFLMNILRGDIARLGRTGPYYEEIHPELVPRIKPLREIPEKEIVLYAVLNNIE-- 228
Query: 315 HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN-----N 369
L+ + + + ++ +++ P T + R+ DKL + N
Sbjct: 229 --VDLSECPYAVEAFRAEIRDWINEMEEKHPGTKYQILRSYDKLFPLIAKTYTKKTSELN 286
Query: 370 TCLLCKAP 377
C +C P
Sbjct: 287 RCKICGQP 294
>gi|332157910|ref|YP_004423189.1| hypothetical protein PNA2_0268 [Pyrococcus sp. NA2]
gi|331033373|gb|AEC51185.1| hypothetical protein PNA2_0268 [Pyrococcus sp. NA2]
Length = 323
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 120/323 (37%), Gaps = 43/323 (13%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C YC + + K + + K +M+R +++ VA SG S+
Sbjct: 3 CSKCGREAVYFARYEGKYYCHKHFNEMVESKVKRTIRKYRMIRKGERIGVAVSGGKDSVV 62
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDG----SISQVSISERKANNAQIATAMKYFDSY 179
LLHLL + K+ F + AI ID+G V +++R A + + F Y
Sbjct: 63 LLHLLAK-----LRKKFPFEIVAITIDEGIKGYRDKSVEVAKRNAELLGVEHHIYRFKDY 117
Query: 180 FTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQ 239
F D + M + L + Y R+ LL +
Sbjct: 118 IG------------------------FTLDETVQIMGERGERLGACSY-CGVWRRWLLNK 152
Query: 240 AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSD-DRTGDIITLRPLRDFS 298
AA++L K+ D + N+ G A + + + G + ++PLR+
Sbjct: 153 AAEELKVDKLALGLNLDDEVQVFLMNLMRGDVARLGRTGPYYEVIHEGLVPRIKPLREVP 212
Query: 299 SKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
KE++ Y + N++ L+ + + + ++ +++ P T + R+ DK+
Sbjct: 213 EKEIVLYAVLNNIE----VDLSECPYAVEAFRAEIRDWLNEMEEKHPGTKYQLLRSYDKI 268
Query: 359 SLDLTSMNVN----NTCLLCKAP 377
L N C +C P
Sbjct: 269 FPLLAKTYAREVKLNRCKICGQP 291
>gi|393907587|gb|EJD74702.1| hypothetical protein, variant [Loa loa]
Length = 265
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 236 LLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLR 295
L ++ A+KL K+ + + +LA+ +++++L +G V V D R GD+ +RPLR
Sbjct: 85 LCIRIAQKLGVHKVMLSMSADELASTTLSSLALARGPSVFHAVNVVDKRHGDVTLIRPLR 144
Query: 296 DFSSKEVIYYNIF--NDLSPVHVPSLATLA-DPLASLQKAAESFVTDLQTN-FPSTVSTV 351
+ S KE+ N F +D ++V A D SLQ + F+ L N F TV+T+
Sbjct: 145 EISEKEIALVNRFERSDRYILNVQKDRVKADDDDQSLQSVSRDFINGLIMNGFTGTVTTI 204
Query: 352 FRTADKLSLDLTSMNVNNTCLLC 374
A+K+ TS C+LC
Sbjct: 205 LSIANKVQAPATS---RTRCVLC 224
>gi|337284013|ref|YP_004623487.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus
yayanosii CH1]
gi|334899947|gb|AEH24215.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus
yayanosii CH1]
Length = 323
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 116/305 (38%), Gaps = 43/305 (14%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
YC + + K +A + K +M+R +K+ VA SG S+ L+HLL + ++
Sbjct: 21 YCHRHFNEMVERKVKATIRKYQMIRRGEKIGVAVSGGKDSVVLMHLLAK-----LRRKFP 75
Query: 142 FSVCAIYIDDGSIS----QVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTD 197
F + AI ID+G V I++R A I + F Y
Sbjct: 76 FELVAITIDEGIRGYRDRSVEIAKRNAELLGIEHHIYSFRDYIG---------------- 119
Query: 198 VAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
D + M + + Y R+ LL AA++L K+ D
Sbjct: 120 --------LTLDETVEIMGPREERVGACSY-CGVWRRWLLNCAARELGVDKLAVGLNLDD 170
Query: 258 LATKIIANISLGKGAHVPLDVGFSDD-RTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV 316
+ N+ G A + + ++ G + ++PLR+ KE++ Y + ND+
Sbjct: 171 EVQMFLMNLMRGDVARLGRTGPYYEEIHEGLVPRIKPLREVPEKEIVLYAVLNDIE---- 226
Query: 317 PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN----NTCL 372
L+ + + + ++ +++ P T + R+ D+L + N C
Sbjct: 227 VDLSECPYAVEAFRAEIRDWLNEMEEKHPGTKYQLLRSYDRLFPLIAKTYAREIGLNRCK 286
Query: 373 LCKAP 377
LC P
Sbjct: 287 LCGQP 291
>gi|115387403|ref|XP_001211207.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195291|gb|EAU36991.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 331
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 28/297 (9%)
Query: 101 KSKMMR--PQD---KVLVAFSGSHSSMALLHLLQEGMQL---SSHKRILFSVCAIYIDDG 152
K +++R PQD K+L+ S SS LLH+L +++ H +++ + I+
Sbjct: 3 KYRLLRGLPQDRPCKLLLPLSFGLSSSVLLHMLHRQIEVQRSKPHAPPGYTLHVLIIEPS 62
Query: 153 SISQVSISERKANNAQIATAMKYFDSYFTCLEQALE--PDNMKLYTDVAELPLEQFAKDS 210
+IS S+ + LE + PD ++ ++ A +QF+ D+
Sbjct: 63 TISP-SVPPHDEGFELVQETFPLCSFTRLPLEAIFDLVPDVHRVLSEYAG---KQFSDDA 118
Query: 211 ------EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIA 264
++ +++T +SR + TL L + AKKL C I +T LA K +A
Sbjct: 119 SLSNKERLDAFRSSISTATSRTDVDNTLMNRLTVAFAKKLGCYGIVWGDTNGRLAAKALA 178
Query: 265 NISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEV-IYYNIFNDLSPVHV----PSL 319
N++ G+GA V V G + + PLRD EV Y + +L+ + + PS
Sbjct: 179 NVAKGRGASVTWQVADGMSPWG-LEFIFPLRDLFKTEVQPYAGLTPELARIIISDEPPSE 237
Query: 320 ATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKA 376
TL L S+ + +V +P ++ V +TA+KL + ++ C LC++
Sbjct: 238 NTLTKNL-SIDELMMRYVQTQGEKYPGIMTNVTKTANKLQSPQNAADMPQ-CALCQS 292
>gi|319936857|ref|ZP_08011269.1| PP-loop family protein [Coprobacillus sp. 29_1]
gi|319808125|gb|EFW04697.1| PP-loop family protein [Coprobacillus sp. 29_1]
Length = 279
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 110/274 (40%), Gaps = 47/274 (17%)
Query: 94 KFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 153
KF + M++P DK+ V SG SM + LLQE L H + F + + +D G
Sbjct: 22 KFVKGVQTYDMIQPNDKIAVCISGGKDSMLMAKLLQE---LKRHGKFDFELVFLSMDPGY 78
Query: 154 ISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEIN 213
+ N +I ++ ++P++ F D
Sbjct: 79 --------NEKNRKKIEEN-----------------------AEILDIPVQFFESD---- 103
Query: 214 KMFQTVTTLS-SRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGA 272
+FQ VT + S YL +R+ L AK+L C KI D+ I+ + G
Sbjct: 104 -IFQVVTNIEKSPCYLCARMRRGFLYAKAKELGCNKIALGHHIDDVVETILMGMFYGSQI 162
Query: 273 HVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH-----VPSLATLAD-PL 326
+ S + G + +RP+ K++I++ +NDL+ + + L D
Sbjct: 163 QTMMPKLHSTNFEG-MELIRPMYLIEEKDIIHWCHYNDLAFIQCACRFTEEMEELGDVHH 221
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL 360
S ++ ++ + L+T P+ VF++ + + L
Sbjct: 222 TSKREEMKNLIKYLETMNPNVKKNVFKSMENVKL 255
>gi|288559819|ref|YP_003423305.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
gi|288542529|gb|ADC46413.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
Length = 305
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 120/305 (39%), Gaps = 41/305 (13%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK C ++ + K R + + + DKVLVA SG S+ L +L S +R +
Sbjct: 24 CKDCFIESIEKKVRQTIKRENFIDRGDKVLVALSGGKDSVVTLDILN-----SYRERHII 78
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
+CA+ ID+G I+ + + +IA A + + + V
Sbjct: 79 DLCAVTIDEG------IAGYREDGVEIAKA---------------HAERLGIPHKVVSFK 117
Query: 203 LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
E F D ++++ S Y R+ ++ +AA+ TKI T D I
Sbjct: 118 -ESFGID--LDEIMAKENHRGSCTY-CGVFRRWIINRAARDFGATKIATGHNLDDETQAI 173
Query: 263 IANISLGKGAHVPLDVGFSDDRTGDIIT--LRPLRDFSSKEVIYYNIFNDLSPVHVPSLA 320
+ N G ++ +G + ++ T ++PLR+ KE+ Y I L +H LA
Sbjct: 174 LMNYLEGNTENLA-KIGPKTESNDELFTVKIKPLREIPEKEIGLYAIAKGLD-IH---LA 228
Query: 321 TLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL----SLDLTSMNVNNTCLLCKA 376
S + + + DL + P+ + + R DK+ + S V C C
Sbjct: 229 GCPYAEESFRMEISNILKDLTKDHPTIMYSTLRGFDKMRPAIKEEFKSNFVYKRCERCGE 288
Query: 377 PLDTR 381
P R
Sbjct: 289 PSSNR 293
>gi|448509047|ref|XP_003866046.1| Ncs2 protein [Candida orthopsilosis Co 90-125]
gi|380350384|emb|CCG20606.1| Ncs2 protein [Candida orthopsilosis Co 90-125]
Length = 447
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 146/347 (42%), Gaps = 41/347 (11%)
Query: 57 FSRADKLCPRCNTNNGEVVLRLKDIY-CKACLLQYLNHKFRAALGKSKM--------MRP 107
S+ D C RC + +L+ + Y CK C L+ + K R + K +
Sbjct: 7 ISKQDIRCQRCKEESA--ILKARGEYHCKECYLRLVRGKQRKQMSSEKYKINYKKSTLGQ 64
Query: 108 QDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL---FSVCAIYIDDGSISQVSISERKA 164
+KVL+AFSG SS+ LL +L + I F + + ID+ +S +
Sbjct: 65 LEKVLLAFSGGISSLVLLDVLGNLLLEQQQTHIGLQGFEIVVVNIDEKELSSL------- 117
Query: 165 NNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKD-----SEINKMFQTV 219
+ ++ + + + F ++ + + ++ Y D+ L + D + ++ T
Sbjct: 118 -DKEVMSILPELLTRFKPVKISFKTVSLDSYVDLNSLKEIRIENDFTSLANAVDAQSCTF 176
Query: 220 TTLSSR-------QYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGA 272
L SR + LL + + LLLQAA C I + T +A +IIA G+G+
Sbjct: 177 IDLLSRCPNKSSVEDLLTIVFEKLLLQAAYDEGCGTIVLGHSMTRIANEIIALTVKGRGS 236
Query: 273 --HVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPS--LATLADPLAS 328
H + + DI + PLRD E+ Y + +DL V S + + +
Sbjct: 237 SIHRLISNRTENYNDKDIDIIYPLRDLLFAEIDEYAVLSDLKKYEVYSKVVKSRVSKNLT 296
Query: 329 LQKAAESFVTDLQ-TNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLC 374
++ ++ T+L T + ST STV + KL + N N C +C
Sbjct: 297 IRDLVSNYFTNLDVTGYSSTASTVMKIGQKLGSPESKPNTN--CKVC 341
>gi|260944828|ref|XP_002616712.1| hypothetical protein CLUG_03953 [Clavispora lusitaniae ATCC 42720]
gi|238850361|gb|EEQ39825.1| hypothetical protein CLUG_03953 [Clavispora lusitaniae ATCC 42720]
Length = 421
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 139/354 (39%), Gaps = 65/354 (18%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQY---------LNHKFRAALGKSKMMRPQDKVLVA 114
C RC+ N V++ K+ +C C + + L+ +++ G KVL+
Sbjct: 15 CQRCD-NESAVLIARKEKFCAGCFVFFMKGKQRKSMLDERYKVKYGAVAERLGTQKVLLP 73
Query: 115 FSGSHSSMALLHLLQEGMQ---LSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIAT 171
S SS+ LL ++ +Q L+ + F + + I E + N +IA
Sbjct: 74 LSFGISSLVLLDMIASLLQEQNLAHKGKQGFELMVMCI-----------EEEENATKIAL 122
Query: 172 AMKYFDSY--------FTCLEQALEPDNMKLYTDVAELPLEQFAKDSE--INKMFQTVTT 221
K SY L+ + M+L + + A + I ++ + +T
Sbjct: 123 LDKLLASYSPVKIDYKVVTLDSYIVDPLMRLRVSETFAVIGKTAPEETLTIPQLLEHAST 182
Query: 222 LSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFS 281
SSR LL +R L+ A C I + T LA ++I+ G+G+ + V
Sbjct: 183 RSSRADLLSIIRSELIFHTAHAEQCQTILFGHSMTRLANEVISLTVKGRGSEIHTSV--- 239
Query: 282 DDRTG-----DIITLRPLRDFSSKEVIYYNIFNDLSPV-----HVPSLATLADPLASLQK 331
DRT DI + PLRD +F ++S V H+ + + + L K
Sbjct: 240 VDRTASYAGKDIHIIFPLRDI---------LFAEISAVMKLSSHLAEYVVIKEHKSFLVK 290
Query: 332 --AAESFVTDL-----QTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
E+ V T + ST STV +TA+KL S V C +C A +
Sbjct: 291 NMTVEALVGQYFSNLDATGYASTASTVVKTAEKLGAPKAS--VTAVCRVCGAEI 342
>gi|240275346|gb|EER38860.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 349
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
Query: 209 DSEINKMFQ-TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
D E +F+ +++T ++R + L L++ AK+ +C I ++ T LA+K ++N++
Sbjct: 116 DQERLDIFRLSLSTATARADIDGILLTRLVVAIAKEQDCDGILWGDSDTRLASKALSNVA 175
Query: 268 LGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV-----PSLATL 322
G+G VP DV G P+RD E+ Y ++V PS+ L
Sbjct: 176 KGRGFSVPWDVCDGMSPWGIQFNF-PMRDLFKFELSTYASLALPKSLNVVDSERPSVDNL 234
Query: 323 ADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRA 382
++ S++ +V +P ++ + RT DKL S + + C+LC P+D
Sbjct: 235 SNKNTSIEDLLAHYVETQGQKYPGVMANIVRTIDKLQPQ--SADTGHKCMLCGMPVDYSG 292
Query: 383 DLASSSMGATRFSRYVSNATREQ 405
+ + +G S+Y RE+
Sbjct: 293 E-DPAIIGGQGSSQYTLQDWRER 314
>gi|327356924|gb|EGE85781.1| cytoplasmic tRNA 2-thiolation protein 2 [Ajellomyces dermatitidis
ATCC 18188]
Length = 359
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 10/184 (5%)
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLD 277
+++T ++R + L L++ AK+L+C I ++ T LA+K ++N++ G+G P D
Sbjct: 175 SLSTAAARTDIDGILLTRLVVAIAKELDCDAILWGDSDTRLASKALSNVAKGRGFSAPWD 234
Query: 278 VGFSDDRTGDIITLR-PLRDFSSKEVIYYNIFNDLSPVHV-----PSLATLADPLASLQK 331
V D T I P+RD E+ Y ++V PS+ L+ S++
Sbjct: 235 V--CDGMTPWGIQFNFPMRDVLKFELSTYASLALPKSLNVVDSERPSVDNLSSKNLSIED 292
Query: 332 AAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGA 391
+V +P ++ + RT DKL + + C+LC P+D + S+ G+
Sbjct: 293 LLAHYVETQGEKYPGIMANIVRTIDKLQ--APAPDTGYKCVLCGMPVDMSGEDPSALGGS 350
Query: 392 TRFS 395
FS
Sbjct: 351 GGFS 354
>gi|149246648|ref|XP_001527749.1| hypothetical protein LELG_00269 [Lodderomyces elongisporus NRRL
YB-4239]
gi|226711447|sp|A5DSD3.1|CTU2_LODEL RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|146447703|gb|EDK42091.1| hypothetical protein LELG_00269 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 448
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 156/344 (45%), Gaps = 45/344 (13%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALG----KSKMMR-----PQDKVLVA 114
C +C+ G ++ D+YCK C L+++ K R + K K +R +KVL+A
Sbjct: 14 CLKCD--EGAIIKVRSDVYCKQCYLRFIRGKQRKQMSSDKYKVKYLRDGASHSTEKVLLA 71
Query: 115 FSGSHSSMALLHLLQEGM--QLSSHKRIL---FSVCAIYIDDGSISQVSISERKANNAQI 169
FSG SS+ LL +L + Q ++H+ + V I DG+ ++ ++++ +
Sbjct: 72 FSGGVSSLVLLDVLARLLEEQKNTHRDLQGFELVVANISESDGT----NLESLLSSSSIM 127
Query: 170 ATAMKYFDSYFTCLE-QALEP--DNMKLYTDVAELPLEQFAKDSEINKMFQTVTTL---- 222
T ++ +Y ++ + + P D + L + FA + I + Q+V++L
Sbjct: 128 QTLLELVGNYEVSIKVKVVTPNIDPVFLRRIGVDYEFNTFANNLSIEE--QSVSSLAEIL 185
Query: 223 ------SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPL 276
SS + L + LL+ A+ C I + + LA +++A G+G++V
Sbjct: 186 RASPNRSSSEDLRDVIFHQELLRLAQSEGCGTIVYGHSMSRLAIEVLALTVKGRGSNVHS 245
Query: 277 DV-GFSDDRTGDIIT-LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAE 334
+ +D GD I+ + P RD E+ Y + +DL + + A A P + + K
Sbjct: 246 TILDRVEDYCGDQISIIYPFRDLFEYELREYAVLSDLMQ-YESAFAKYAVPKSKVSKNMT 304
Query: 335 -----SFVTDL--QTNFPSTVSTVFRTADKLSLDLTSMNVNNTC 371
S D ++ + ST STV + +KL++ + N + C
Sbjct: 305 VREILSMYLDRWDESGYLSTASTVVKIGEKLTVPTSQNNSSTYC 348
>gi|336383027|gb|EGO24176.1| hypothetical protein SERLADRAFT_415378 [Serpula lacrymans var.
lacrymans S7.9]
Length = 517
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 146/370 (39%), Gaps = 64/370 (17%)
Query: 57 FSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL----------GKSKMMR 106
F R+ K C RC G +V+R +YCK C +N KFR L + ++
Sbjct: 21 FDRS-KDCVRCKEKPGNIVIR-HAVYCKDCFTPLVNMKFRKVLQPCINKTISSSRRSKVK 78
Query: 107 PQDKVLVAFSGSHSSMALLHLL------------QEGMQLSS--HKR---ILFSVCAIYI 149
+L++ SG S LL L+ ++G L H R + S Y+
Sbjct: 79 ADGNLLISCSGGLGSSVLLDLVHRSYFSNRPPMGEDGKPLGGKDHPRNETVWKSAAVCYV 138
Query: 150 DDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKD 209
+ + + + +R + + + F+ LE A D + L +QFA +
Sbjct: 139 EICN-AYPEMRDRTEDVRAVVESYPGFEFIPIRLENAF--DASWWESLGCRLHDKQFAVN 195
Query: 210 -SEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISL 268
S+ +++T +S L+ LR L + T IFT T++ + SL
Sbjct: 196 FSDEGLPLSSLSTPTSNSTPLEGLRGYLTSLPTQ----TAIFTRRTRSSHLLLGTSLTSL 251
Query: 269 ------------GKGAHVPLDVGFS---DDRT------GDIITLRPLRDFSSKEVIYYNI 307
G L +S DD T + +RPLRD KE Y
Sbjct: 252 SVSLISSISQGGGYALREELQEEWSSEHDDNTELKDMLNSVRVVRPLRDIVMKECAAYAR 311
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNV 367
+N++ V L+ + L K F+ L+ ++PSTVST+ RT KL+ N
Sbjct: 312 WNNVKVVGREKLSGANHGIGGLTK---DFIVGLERDYPSTVSTIARTCAKLA---PKDNP 365
Query: 368 NNTCLLCKAP 377
+ CLLC+ P
Sbjct: 366 DGICLLCQRP 375
>gi|68481867|ref|XP_715175.1| hypothetical protein CaO19.4399 [Candida albicans SC5314]
gi|68481970|ref|XP_715124.1| hypothetical protein CaO19.11877 [Candida albicans SC5314]
gi|74585457|sp|Q59ZY9.1|CTU2_CANAL RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|46436732|gb|EAK96090.1| hypothetical protein CaO19.11877 [Candida albicans SC5314]
gi|46436785|gb|EAK96142.1| hypothetical protein CaO19.4399 [Candida albicans SC5314]
Length = 452
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 148/345 (42%), Gaps = 39/345 (11%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL---------GKSKMMRPQDKVL 112
++C +C T N V R++ + C C ++++ K R + G++ ++L
Sbjct: 12 EICQKCKTENAVVHARVEKL-CSNCYIRFIRGKLRKQMHDERYKVKFGRAVEQYGTQRIL 70
Query: 113 VAFSGSHSSMALL----HLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER------ 162
+A SG SS+ LL LLQ+ +L K+ F + + +D+ + S++ R
Sbjct: 71 LALSGGESSLVLLDILGSLLQDQNELHKGKQ-GFELVVVNLDEYELD--SLNNRIQKVFP 127
Query: 163 ----KANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQT 218
K +I+ + DSY E++L + L D + + ++ +
Sbjct: 128 ELLAKYQPVKISLNVLSLDSYVD--EESLH--RILLTPDFRAMSKSLDPTRVTLTEILRL 183
Query: 219 VTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV 278
SS + LL + +L+L+ A K +C + T LA +IIA G+G+ + +
Sbjct: 184 CPNKSSAEDLLTIVYNDLILRVAAKEDCQTVVYGHCMTRLANEIIALTVKGRGSIIHKSI 243
Query: 279 GFSDDRTGD--IITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA--DPLASLQKAAE 334
+ D I + PLR+ E+ Y +L+ + S + + +++
Sbjct: 244 ADHTETIDDKEIKVMFPLREILQAEISAYVKLAELNKYVISSTVQKSKINKNLTIRDLTT 303
Query: 335 SFVTDLQ-TNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
++ L T + ST STV +T +KL + NV C +C A +
Sbjct: 304 NYFKQLDATGYASTASTVAKTGEKLG---SPSNVLCQCQICGADI 345
>gi|380493305|emb|CCF33976.1| hypothetical protein CH063_06063 [Colletotrichum higginsianum]
Length = 394
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 150/363 (41%), Gaps = 54/363 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALG------KSKMMRPQD---KVLVA 114
C RC T V+ KD C+ C Q++ + L K + D K L+
Sbjct: 10 CRRCKTPT--VLTVRKDPLCETCYEQHIAQRVIKRLAQPYKDIKENIASTPDAKAKYLLG 67
Query: 115 FSGSHSSMALLHLLQEGMQLSSHK--RILFSVCAIYIDDGSISQVSISERKANNAQIATA 172
S SS +L+ +L +Q K R+ + V ++ID + S +A+ A +
Sbjct: 68 LSFGVSSASLVQVLDRNLQGLKDKNLRVAYEVHVVHIDTDLLGNTPTSSTEASGA--SQV 125
Query: 173 MKYFDSYFTCLEQALEP--DNMKLYT-DVAELPLEQ--FAKDSEINKMFQTVTTLSSRQY 227
++ + F + P D + L T D + LP Q A ++ ++ + + +++SR
Sbjct: 126 LEKYKEQFPNMSMQTVPLSDALALDTIDWSVLPALQTDLAPALQLKRLLEALPSVTSRVD 185
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVG-------- 279
+ + L ++LLL A C + T T LA +A + G+G VP V
Sbjct: 186 ISRLLVRHLLLSLALNSGCHALMLGCTTTALAELTLAETAKGRGFAVPWQVSDGPVPVTT 245
Query: 280 FSDDRT-GDIITLRP---------LRDFSSKEVIYY---------NIFNDLSPVHVPSLA 320
FS T G++ + LRD +EVI Y ++ D P S
Sbjct: 246 FSRQSTEGEVAEAKETSTIPVYYLLRDVFRREVITYAGLTKPPIKDLVQDAGPA---SST 302
Query: 321 TLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDT 380
++ S++ + +++ ++PS V+ V RT+ K LT N + C +C +D
Sbjct: 303 IVSHKELSIEDVMARYFEEVEESYPSVVANVVRTSGK----LTRENDGDACAVCGMDMDA 358
Query: 381 RAD 383
+ D
Sbjct: 359 QGD 361
>gi|344228727|gb|EGV60613.1| hypothetical protein CANTEDRAFT_111555 [Candida tenuis ATCC 10573]
Length = 415
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 144/324 (44%), Gaps = 24/324 (7%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKAC----LLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
C +C + V K++ C C + L RA + K KVL+AF G
Sbjct: 12 CQKCGEDAS--VTNRKEVVCNECFNMSMRGRLRKSLRADIYKINSKHGVHKVLLAFKGDV 69
Query: 120 SSMALLHLLQEGM--QLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-- 175
+S+ L ++ + + Q+++H + F + + ID+ + + + + ++ Q T + Y
Sbjct: 70 NSIVCLDMIMQLVLEQINNHGKTGFQLLVLNIDERNGIEEKLQQVRSFYEQKGTIINYKT 129
Query: 176 --FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLR 233
+SY T ++L+ ++ D L + + + + S+ + + +
Sbjct: 130 VQVNSYLTG--KSLK----RIGIDKKFNILVKDESSHSMEDIINLIPNKSAVEDFKEVIY 183
Query: 234 QNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRP 293
+LL+ A+ C I + L++ I+AN+ G+G+++ V +D I P
Sbjct: 184 DQILLKQAEIEGCGTILYCNSMNKLSSSILANLIKGRGSNMNFKV--NDTEKQGIYIKNP 241
Query: 294 LRDFSSKEVIYYNIFNDLSPVHVPSLATLA--DPLASLQKAAESFVTDLQTN-FPSTVST 350
LR+ E+ YY+ N++ + + A ++ + ++++ ++ ++ N + ST+ T
Sbjct: 242 LRELFDSEIDYYSEVNEIGQLKFQNNAVISNINRNMTIKQITSRYLNQIEANGYASTIPT 301
Query: 351 VFRTADKLSLDLTSMNVNNTCLLC 374
V + +KL ++ T C +C
Sbjct: 302 VVKITEKL-VEPTKFKPIGNCKIC 324
>gi|154283229|ref|XP_001542410.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|226711433|sp|A6QYX4.1|CTU2_AJECN RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|150410590|gb|EDN05978.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 359
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 209 DSEINKMFQ-TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
D E +F+ +++T ++R + L L++ AK+ +C I ++ T LA+K ++N++
Sbjct: 136 DQERLDIFRLSLSTATARADIDGILLTRLVVAIAKEQDCDGILWGDSDTRLASKALSNVA 195
Query: 268 LGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV-----PSLATL 322
G+G VP DV G P+RD E+ Y ++V PS+ L
Sbjct: 196 KGRGFSVPWDVCDGMSPWGIQFNF-PMRDLFKFELSTYASLALPKSLNVVDSERPSVDNL 254
Query: 323 ADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRA 382
++ S++ +V +P ++ + RT +KL S + ++ C+LC P+D
Sbjct: 255 SNKNMSIEDLLAHYVETQGQKYPGVMANIVRTINKLQPQ--SADTDHKCMLCGMPVDYSG 312
Query: 383 DLASSSMGATRFSRYVSNATREQ 405
+ + +G S+Y RE+
Sbjct: 313 E-DPAIIGGQGSSQYTLQDWRER 334
>gi|320163970|gb|EFW40869.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 642
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 53/216 (24%)
Query: 215 MFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHV 274
M V +LS+R+ L++ LR L++ AK + ++ +A +I+ ++ G+GA +
Sbjct: 295 MLAGVGSLSAREDLVRVLRLRLIVHIAKSRGYRYVAFGDSADRIAQNMISFVAQGRGASL 354
Query: 275 PLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVP----------------- 317
D D R D I RP R + K++ Y ++D+ P
Sbjct: 355 AYDTSLLDARDPDAILGRPFRALALKDLALYARWSDVPSEEAPTLASGINLFRLWKSRYL 414
Query: 318 --------SLATLADPL---------------------------ASLQKAAESFVTDLQT 342
+L + D + AS+ E+FV LQ
Sbjct: 415 LRVQQNDTTLPAIPDSVTPVPAWKLAFQQTAAASQSNQSSQQIAASISTLTEAFVNALQR 474
Query: 343 NFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
+F TVSTV RT+ KL + + + +C++C P+
Sbjct: 475 DFTGTVSTVQRTSTKL-VAVPPKDEERSCVICHGPI 509
>gi|18419746|ref|NP_567993.1| cytoplasmic tRNA 2-thiolation protein 2 [Arabidopsis thaliana]
gi|332278212|sp|O65628.3|CTU2_ARATH RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|115646788|gb|ABJ17118.1| At4g35910 [Arabidopsis thaliana]
gi|332661188|gb|AEE86588.1| cytoplasmic tRNA 2-thiolation protein 2 [Arabidopsis thaliana]
Length = 458
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 37/293 (12%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI- 140
+C C + KFR A+ M+ P D VLVAFSG SS L + E +Q+ + K
Sbjct: 59 FCADCFRNNVFGKFRLAVTSHAMITPSDNVLVAFSGGSSSRVSLQFVHE-LQIKALKNYE 117
Query: 141 --------LFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNM 192
+F V ++D+ + A + ++ A+++ +CL +
Sbjct: 118 ASRDRSLPVFGVGVAFVDE-------TAAFPALSTEMIDAIEWVRYTVSCLSPPAK---- 166
Query: 193 KLYTDVAELPLEQ-FAKDS-----EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNC 246
D+ +P+E F DS + K+ +V + ++ LL L+ L + A +
Sbjct: 167 ----DLHVVPVESIFGSDSLDARDRLLKLLDSVPDDTGKEDLLLHLKMLSLQKVAAENGY 222
Query: 247 TKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYN 306
++ + +A+ ++ G+G + D+ D R I L PLRD E+
Sbjct: 223 NRLVLGSCTSRIASHVLTATVKGRGYSLSADIQHVDARWKVPIVL-PLRDCVRLEITRLC 281
Query: 307 IFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
+ + L V + + + SFV LQ PS T+ RTA KL+
Sbjct: 282 LLDGLKTVELACRSQCG-----INDLVSSFVALLQEENPSRECTIVRTAAKLT 329
>gi|71011607|ref|XP_758474.1| hypothetical protein UM02327.1 [Ustilago maydis 521]
gi|46097894|gb|EAK83127.1| hypothetical protein UM02327.1 [Ustilago maydis 521]
Length = 687
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 76/145 (52%), Gaps = 23/145 (15%)
Query: 236 LLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPL---DVGFSDDRTGDIITLR 292
LL + AK+ +C + +T T ++ ++I +++ G G +P+ D + DD ++ +R
Sbjct: 324 LLRRTAKQYDCAALLLGDTATRISIRLIEDLAKGAGHKIPVQGSDAAWIDD----LLIVR 379
Query: 293 PLRDFSSKEVIYYNIFNDLSPVH------VPSLATLA-------DPL---ASLQKAAESF 336
PL+ +EV++Y +L P+ P+++T P +S+ + E+F
Sbjct: 380 PLKTHLLQEVVFYTSQLNLDPLQPEQPIVAPTVSTTGILASNSSTPAMDKSSIARLTETF 439
Query: 337 VTDLQTNFPSTVSTVFRTADKLSLD 361
+ +L+ PSTV+T+ +T KL L+
Sbjct: 440 ILNLEKGVPSTVTTIGKTGSKLVLN 464
>gi|51970016|dbj|BAD43700.1| unnamed protein product [Arabidopsis thaliana]
gi|62318837|dbj|BAD93893.1| hypothetical protein [Arabidopsis thaliana]
Length = 458
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 37/293 (12%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI- 140
+C C + KFR A+ M+ P D VLVAFSG SS L + E +Q+ + K
Sbjct: 59 FCADCFRNNVFGKFRLAVTSHAMITPSDNVLVAFSGGSSSRVSLQFVHE-LQIKALKNYE 117
Query: 141 --------LFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNM 192
+F V ++D+ + A + ++ A+++ +CL +
Sbjct: 118 ASRDRSLPVFGVGVAFVDE-------TAAFPALSTEMIDAIEWVRYTVSCLSPPAK---- 166
Query: 193 KLYTDVAELPLEQ-FAKDS-----EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNC 246
D+ +P+E F DS + K+ +V + ++ LL L+ L + A +
Sbjct: 167 ----DLHVVPVESIFGSDSLDARDGLLKLLDSVPDDTGKEDLLLHLKMLSLQKVAAENGY 222
Query: 247 TKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYN 306
++ + +A+ ++ G+G + D+ D R I L PLRD E+
Sbjct: 223 NRLVLGSCTSRIASHVLTATVKGRGYSLSADIQHVDARWKVPIVL-PLRDCVRLEITRLC 281
Query: 307 IFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
+ + L V + + + SFV LQ PS T+ RTA KL+
Sbjct: 282 LLDGLKTVELACRSQCG-----INDLVSSFVALLQEENPSRECTIVRTAAKLT 329
>gi|295670501|ref|XP_002795798.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284883|gb|EEH40449.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 376
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 142/358 (39%), Gaps = 63/358 (17%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQD-------KVLVAFSGSHSSMALLHLLQEGMQLS 135
C+ C + ++ K + + + RPQ+ K+L+ S SS +LLH+L ++
Sbjct: 22 CQQCFILFIGSK---VVKRMEKYRPQNAPKDRLRKLLLPLSFGVSSSSLLHILNLQLERQ 78
Query: 136 SHKRILFSVCAIYI---------DDGSISQVSISERKANNAQIA--------TAMKYFDS 178
I I++ D G + + +Q+ TA+K S
Sbjct: 79 ISNGIGRRAYDIHVLNVAFCGQPDSGRLGLFRETYPLHTYSQVPLHSIFQYDTAIKDVIS 138
Query: 179 YFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLL 238
+ C E +P + +N + ++ +SR + + L++
Sbjct: 139 EYGCPEFVGDP---------------SMTDEELLNLFLSSPSSATSRTDIGAIIFTRLVV 183
Query: 239 QAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFS 298
AK+ NC I ++ + LA+K ++N++ G+G DV G PLRD
Sbjct: 184 AFAKEHNCDGILWGDSDSRLASKALSNVAKGRGFSASCDVCDGMSPWGIQFNF-PLRDLL 242
Query: 299 SKEVIYYNIFNDLSPVHVPSLATLADPL-----------ASLQKAAESFVTDLQTNFPST 347
E+ Y + V +P +ADP S++ +V +P
Sbjct: 243 KFELSTY------ASVALPKSLIMADPERLSMDNLTNKNMSIENLLAHYVETQGEKYPGI 296
Query: 348 VSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQ 405
++ + RT +K L++ + + C+LC P+D + ++ +GA S+YV RE+
Sbjct: 297 MANIVRTINK--LNVPPGDSGSKCILCSMPVDNSGEDPANPLGA-ECSQYVLKDHRER 351
>gi|288932186|ref|YP_003436246.1| PP-loop domain protein [Ferroglobus placidus DSM 10642]
gi|288894434|gb|ADC65971.1| PP-loop domain protein [Ferroglobus placidus DSM 10642]
Length = 302
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 48/303 (15%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK L+ + + A+ K KM+ DK+ +A SG S+ L H L ++L +R L
Sbjct: 22 CKKHFLRDFYRRVKRAVAKYKMIESGDKIALAMSGGKDSVTLAHTL---IELYGKRRDL- 77
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
AI ID+G I + +IA + C + +E + ++ L
Sbjct: 78 EFFAITIDEG------IEGYRPPTVEIAKKV--------CRDLGIEHVVVSFREEIG-LD 122
Query: 203 LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTA-----ETQTD 257
L++ + N T R+ LL + A++L TK+ T ETQT
Sbjct: 123 LDEMVERGSRN-----ACTYCG------VFRKYLLNRTARELGATKLATGHNLDDETQTI 171
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVP 317
L + A+I +P V + G + ++PLR+ KEV+ Y I N+L PV +
Sbjct: 172 LLNFLNADIE-RLARLIPQRV-----QKGLVYRIKPLREIYEKEVVVYAIINNL-PVSLE 224
Query: 318 SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN---NTCLLC 374
P +L + F+ + + +P ++ R+ ++L L M C +C
Sbjct: 225 ECPYSRFPARALVR---DFIYEFEKKYPGRKFSIMRSFEELLPCLHKMYPQVELGECKIC 281
Query: 375 KAP 377
P
Sbjct: 282 GEP 284
>gi|148642613|ref|YP_001273126.1| PP family ATPase [Methanobrevibacter smithii ATCC 35061]
gi|261349566|ref|ZP_05974983.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
gi|148551630|gb|ABQ86758.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii ATCC 35061]
gi|288861524|gb|EFC93822.1| ATPase, PP-loop superfamily [Methanobrevibacter smithii DSM 2374]
Length = 305
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 119/306 (38%), Gaps = 54/306 (17%)
Query: 64 CPRCNTNNGEVVLRLKD---IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
C +C N +V+++ + CK C ++ + K + K K++ DKVLVA SG
Sbjct: 3 CSKCG--NSQVIIKKQQSGQYLCKDCFIESIEKKVIKTVKKEKLLDKGDKVLVALSGGKD 60
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDG----SISQVSISERKANNAQIA-TAMKY 175
S+ L +L S K + +CA+ +D+G V I+ R A I +
Sbjct: 61 SVTTLEILN-----SFRKMNIIDICAVTVDEGIDNYRQEGVDIAIRHAKRLGIEHKVVSL 115
Query: 176 FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQN 235
+ Y L++ ++ DN + S Y R+
Sbjct: 116 KEEYGITLDEIMQKDNH-----------------------------IGSCSY-CGVFRRT 145
Query: 236 LLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDI-ITLRPL 294
++ +AA+++ TKI T D I+ N G ++ S + + + ++PL
Sbjct: 146 IINKAAREMGATKIATGHNLDDEVQAIMMNYLEGNTDNLTKLGAKSSSKAKEFTVKIKPL 205
Query: 295 RDFSSKEVIYYNIFNDLSPVHVPSLATLADPLA--SLQKAAESFVTDLQTNFPSTVSTVF 352
R+ +E+ Y + +L VH S P A S + + L P+ +
Sbjct: 206 REIPEREIGLYVVAKELE-VHFDSC-----PYAQQSFRGEVSDLINKLSEKHPTIKYSAL 259
Query: 353 RTADKL 358
R DK+
Sbjct: 260 RGYDKI 265
>gi|321254515|ref|XP_003193100.1| hypothetical protein CGB_C8710C [Cryptococcus gattii WM276]
gi|317459569|gb|ADV21313.1| Hypothetical Protein CGB_C8710C [Cryptococcus gattii WM276]
Length = 548
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 80/195 (41%), Gaps = 38/195 (19%)
Query: 223 SSRQYLLQTLRQNLLLQAAKKL-NCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF- 280
SSR LL + +LL A L + + + ET T A ++I+ +LG+G +PL++
Sbjct: 254 SSRPQLLTHILSSLLTTVAHTLPHISHVLMGETSTRQAERLISGTALGRGWQLPLELAAV 313
Query: 281 --------------------SDDRTGDIITLRPLRDFSSKEVIYYNIFNDLS-------- 312
+ T L+P+ D ++KE Y LS
Sbjct: 314 RLGSALPSPEHLIASPEAKGKESETQGFTWLKPMSDLTAKEAAIYCHLRSLSSFTHNARH 373
Query: 313 -----PVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNV 367
P H ++ + SL+ E+F+ L + P+TVST+ RT KL +
Sbjct: 374 WDSAGPPH--AVEKTKGGVKSLEMLTENFIAGLGASHPATVSTINRTGGKLVFPGKEED- 430
Query: 368 NNTCLLCKAPLDTRA 382
C +C+ P+D A
Sbjct: 431 RPYCPVCQMPVDPSA 445
>gi|409096316|ref|ZP_11216340.1| PP-loop superfamily ATPase [Thermococcus zilligii AN1]
Length = 324
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 116/308 (37%), Gaps = 46/308 (14%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
YC + + KF+ + K +++ ++V V SG S+ L+HLL + ++
Sbjct: 23 YCHRHFNEMVEKKFKETVKKYRLIEKGERVAVGVSGGKDSVVLMHLLAK-----LREKFP 77
Query: 142 FSVCAIYIDDG----SISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTD 197
F + AI ID+G + V ++ R A I + F Y
Sbjct: 78 FELVAITIDEGIAGYRPASVEVARRNAKKLGIEHRVYSFKEYIG---------------- 121
Query: 198 VAELPLEQFAKDSEINKM--FQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQ 255
F D + M F+ + + Y R+ LL AAK + K+
Sbjct: 122 --------FTLDETVEVMGSFEMGERVGACSY-CGVWRRWLLNYAAKDVGADKLALGHNL 172
Query: 256 TDLATKIIANISLGKGAHVPLDVGFSDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSPV 314
D ++ NI G A + + ++ +++ ++PLR+ KE + Y + N +
Sbjct: 173 DDEVQMVLMNILRGDIARLGRTGPYYEEIHPELVPRIKPLREIPEKETLLYAVLNSIE-- 230
Query: 315 HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN-----N 369
L+ + + + ++ +++ P T + R+ D+L + N
Sbjct: 231 --VDLSECPYAVEAFRAEIRDWLNEMEEKHPGTKYQILRSYDRLFPLIAKTYTKKTSELN 288
Query: 370 TCLLCKAP 377
C +C P
Sbjct: 289 RCKICGQP 296
>gi|307102713|gb|EFN50982.1| hypothetical protein CHLNCDRAFT_141632 [Chlorella variabilis]
Length = 467
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 119/312 (38%), Gaps = 57/312 (18%)
Query: 62 KLCPRCNTNNGEVVLRLKDIY---CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGS 118
KLC C+ VLR + C+ C L + + +++ RP ++V VA SG
Sbjct: 3 KLC--CHCGQQRAVLRRPKTFEQLCRECFYAALEEEVHQTIVGARLFRPGERVAVAASGG 60
Query: 119 HSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG--SISQVSISERKANNAQIATAMKYF 176
S L H++ Q + LF + ID+G S+ K N AQ + F
Sbjct: 61 KDSTVLAHMMTTLNQRHGYGLDLF---LLSIDEGISGYRDDSLDTVKRNEAQYQIPLHVF 117
Query: 177 DSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNL 236
Y D+ +++ ++ + T S+ + R+
Sbjct: 118 S-----------------YKDLYGWTMDEIVRE---------IGTRSNCTF-CGVFRRQA 150
Query: 237 LLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT------ 290
L + A + KI T D+A ++ NI G VP R +IIT
Sbjct: 151 LDRGAALVGAHKIATGHNADDVAETVLLNIIRGD---VP-----RLGRCANIITGEDSSL 202
Query: 291 --LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTV 348
++P + KE++ Y F L S + P A+ + A FV DL+ PS +
Sbjct: 203 PRVKPFKYTYEKEIVMYAYFKRLDYF---STECIYAPYAA-RGFAREFVKDLEAARPSAI 258
Query: 349 STVFRTADKLSL 360
+ R+A++ +
Sbjct: 259 VDLIRSAERFRV 270
>gi|304314090|ref|YP_003849237.1| ATPase [Methanothermobacter marburgensis str. Marburg]
gi|302587549|gb|ADL57924.1| predicted ATPase [Methanothermobacter marburgensis str. Marburg]
Length = 314
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 125/326 (38%), Gaps = 45/326 (13%)
Query: 64 CPRCNTNNGEVVLRLK---DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
C RC + V++ K + C C ++ K + K ++ D+VLV SG
Sbjct: 3 CTRCGSER--VIINRKYSGQMLCGECFIETTRKKVMKDIRKYGLIERGDRVLVGLSGGKD 60
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYF 180
S+ + +L E R + + A+ ID+G IS + + + A
Sbjct: 61 SVMVTDILDE-----LRNRNIIELEAVTIDEG------ISGYREDGIRAAGRF------- 102
Query: 181 TCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQA 240
C E+ + +KL D A + L++ K+ + T R+ +L +
Sbjct: 103 -CAERGIPHRVVKL-KDYAGITLDEIMKNPS-----RGACTYCG------VFRRWILNRE 149
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDII-TLRPLRDFSS 299
A+K TKI T D I+ N G ++ + G I ++PLR+
Sbjct: 150 ARKSGATKIATGHNLDDECQAIVMNYLEGNLENLTRIGPVTSTAGGRFIPKIKPLREIPE 209
Query: 300 KEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK-- 357
+EV Y + L VH LA S ++ F+ + P+ + + R DK
Sbjct: 210 REVGLYVLARGLD-VH---LAGCPYASGSFRREIGDFLKQISVKRPTIMYSTLRGFDKIK 265
Query: 358 --LSLDLTSMNVNNTCLLCKAPLDTR 381
L D+ + TCL+C P R
Sbjct: 266 ESLIKDMHGGRKSGTCLICGEPSSGR 291
>gi|443718872|gb|ELU09290.1| hypothetical protein CAPTEDRAFT_102102 [Capitella teleta]
Length = 327
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 108/296 (36%), Gaps = 33/296 (11%)
Query: 80 DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR 139
D C+ C + + +K+ P DKV + SG S L ++++ L+
Sbjct: 21 DAMCRECFYWAFEEEIHKTIIDAKLFTPGDKVAIGASGGKDSTVLAYVMK---ALNDRYN 77
Query: 140 ILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVA 199
+ + +D+G + + T + D Y CL P + Y D+
Sbjct: 78 YRLDLYLLSVDEGITGY--------RDDSLETVKRNRDQY--CL-----PLKIVSYEDLY 122
Query: 200 ELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLA 259
++ K+ L + R+ L + A C KI T D+A
Sbjct: 123 GWTMDAIVKE----------IGLKNNCTFCGVFRRQALDRGAMLTECNKIVTGHNADDIA 172
Query: 260 TKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSL 319
+I NI G A + + + G + +P + KE++ Y F L S
Sbjct: 173 ETVIMNILRGDIARLRRCTAITTGQEGSLPRCKPFKYTYEKEIVMYAYFKKLDYF---ST 229
Query: 320 ATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDL-TSMNVNNTCLLC 374
+ P A + A +F+ D++ PS + + + + LS+ M V TC C
Sbjct: 230 ECIYSPNA-YRGYARAFIKDVEKVRPSAIIDIIHSGESLSIKKDVKMPVQGTCTRC 284
>gi|222445889|ref|ZP_03608404.1| hypothetical protein METSMIALI_01535 [Methanobrevibacter smithii
DSM 2375]
gi|222435454|gb|EEE42619.1| TIGR00269 family protein [Methanobrevibacter smithii DSM 2375]
Length = 305
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 119/306 (38%), Gaps = 54/306 (17%)
Query: 64 CPRCNTNNGEVVLRLKD---IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
C +C N +V+++ + CK C ++ + K + K K++ DKVLVA SG
Sbjct: 3 CSKCG--NSQVIIKKQQSGQYLCKDCFIESIEKKVIKTVKKEKLLDKGDKVLVALSGGKD 60
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDG----SISQVSISERKANNAQIA-TAMKY 175
S+ L +L S K + +CA+ +D+G V I+ R A I +
Sbjct: 61 SVTTLEILN-----SFRKMNVIDICAVTVDEGIDNYRQEGVDIAIRHAKRLGIEHKVVSL 115
Query: 176 FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQN 235
+ Y L++ ++ DN + S Y R+
Sbjct: 116 KEEYGITLDEIMQKDNH-----------------------------IGSCSY-CGVFRRT 145
Query: 236 LLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDI-ITLRPL 294
++ +AA+++ TKI T D I+ N G ++ S + + + ++PL
Sbjct: 146 IINKAAREMGATKIATGHNLDDEVQAIMMNYLEGNTDNLTKLGAKSSSKAKEFTVKIKPL 205
Query: 295 RDFSSKEVIYYNIFNDLSPVHVPSLATLADPLA--SLQKAAESFVTDLQTNFPSTVSTVF 352
R+ +E+ Y + +L VH S P A S + + L P+ +
Sbjct: 206 REIPEREIGLYVVAKELE-VHFDSC-----PYAQQSFRGEVSDLINKLSEKHPTIKYSAL 259
Query: 353 RTADKL 358
R DK+
Sbjct: 260 RGYDKI 265
>gi|297798326|ref|XP_002867047.1| hypothetical protein ARALYDRAFT_328161 [Arabidopsis lyrata subsp.
lyrata]
gi|297312883|gb|EFH43306.1| hypothetical protein ARALYDRAFT_328161 [Arabidopsis lyrata subsp.
lyrata]
Length = 459
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 37/293 (12%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI- 140
+C C + KFR A+ M+ P D VLVAFSG SS L + E +Q+ + K
Sbjct: 60 FCAECFRNNVFGKFRLAVTSHAMITPSDNVLVAFSGGSSSRVALQFVHE-LQIKALKNYE 118
Query: 141 --------LFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNM 192
+F V ++D+ + A + + A ++ S + +L P
Sbjct: 119 ASRDRSLPVFGVGVAFVDE-------TAAFPALSTETVDASEWIRSTVS----SLSPPAK 167
Query: 193 KLYTDVAELPLEQ-FAKDS-----EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNC 246
L+ +P+E F DS + K+ +V + ++ LL L+ L + A +
Sbjct: 168 DLHV----VPVESVFGSDSLDARDRLVKLLDSVPDDTGKEDLLLHLKMLTLQKVASENGY 223
Query: 247 TKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYN 306
++ + +A+ +++ G+G + D+ D R I L PLRD E+
Sbjct: 224 NRLVVGSCTSRIASHVLSATVKGRGYSLSADIQHVDARWKVPIVL-PLRDCVRLEITRLC 282
Query: 307 IFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
+ L V + + + SFV LQ PS T+ RTA KL+
Sbjct: 283 HLDGLKTVELACRSQCG-----INDLVSSFVALLQEENPSRECTIVRTAAKLT 330
>gi|50293033|ref|XP_448949.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608728|sp|Q6FLE5.1|CTU2_CANGA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|49528262|emb|CAG61919.1| unnamed protein product [Candida glabrata]
Length = 469
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 154/381 (40%), Gaps = 78/381 (20%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRP------QDK------- 110
C RCN N EV+ R K+++C C ++ K R + R +DK
Sbjct: 6 CQRCNKNAVEVISR-KELFCAECFRVFVMQKQRKQMMSDDYYRDIFKVMYKDKIRSAEEA 64
Query: 111 --------VLVAFS-GSHSSMAL----LHLLQEGMQLSSHKRILFSV----CAIYIDDGS 153
+L+ S GS S M L L LL++ MQ H++ F+V C +D
Sbjct: 65 EQQNKNSTILIPLSFGSSSLMMLDIVHLTLLEQKMQ---HQKTGFNVDVLICYRESNDEL 121
Query: 154 ISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEIN 213
++ + + ++ + + + + CL+ E D +L V +E + IN
Sbjct: 122 LTNIQSNIKELSTVRYSENKDNIRFHTLCLDSMFEIDK-ELIDQVVLHNVEFTGRQVSIN 180
Query: 214 K------MFQTVTT----LSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKII 263
+ QTV T S+++ ++ + ++L+ + A + I + T LA +II
Sbjct: 181 ESEHANLSLQTVLTSCPNRSTKEDIIDFVTKHLVKKYAYQNGQKAILWGHSMTRLADEII 240
Query: 264 ANISLGKGAHVP-------LDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV 316
+ + G+GA + LDV + L PL+D EV Y DLS +
Sbjct: 241 SCVVKGRGAQISSKLNTTNLDVNYG----SRFKNLYPLKDILLTEVDAYCALFDLSKYLI 296
Query: 317 PSLATLADPL-------------------ASLQKAAESFVTDLQTNFPSTVSTVFRTADK 357
L D L ++ + A + D++ + + ++TV RT DK
Sbjct: 297 K--YELQDSLLVNKLKKEKHIGNQRLAKNMTINELARKYFNDIEGEYSNVIATVLRTGDK 354
Query: 358 LSLDLTSMNVNNTCLLCKAPL 378
L L ++ + C +CK+ +
Sbjct: 355 LDEPLATLGEKH-CRICKSTV 374
>gi|343427532|emb|CBQ71059.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 686
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 24/157 (15%)
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPL---DVGFSDDR 284
L + L LL + A++ +C + +T T ++ ++I +++ G G +P+ D + DD
Sbjct: 307 LHRILISALLRRTARQYDCAALLLGDTATRISIRLIEDLAKGAGHKLPVQGSDAAWLDD- 365
Query: 285 TGDIITLRPLRDFSSKEVIYYNI---FNDLSPVH--VPSLATLADPLA------------ 327
++ +RP + +++++Y L P VP + AD LA
Sbjct: 366 ---LLVIRPFKTHLMQDILFYTSALGLEQLQPEQHVVPPTVSTADVLANTNSSVPAMDKS 422
Query: 328 SLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTS 364
S+ + E+F+ +L+ PSTV+T+ +T KL L+ S
Sbjct: 423 SIARLTETFILNLEKGVPSTVTTIGKTGSKLVLNAPS 459
>gi|336477052|ref|YP_004616193.1| PP-loop domain-containing protein [Methanosalsum zhilinae DSM 4017]
gi|335930433|gb|AEH60974.1| PP-loop domain protein [Methanosalsum zhilinae DSM 4017]
Length = 306
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 126/314 (40%), Gaps = 43/314 (13%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
C+ ++ + K + + K + D + VA SG S LL++L + ++ RI+
Sbjct: 24 CRKHFIEDVERKIKLTIRKEANIAKNDTIAVALSGGKDSSVLLYVLHKTLKERPDIRIV- 82
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
AI +D+G I +++ Q A A+ NM + V
Sbjct: 83 ---AITVDEG------IEGYRSHTVQSA---------------AILAQNMGIEHIVVSFE 118
Query: 203 LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
++F K ++++ + Y LR++LL + A+ + TK+ T D A I
Sbjct: 119 -QEFGKS--LDELISGERVQGACTYC-GVLRKSLLNRIARNIGATKLATGHNLDDEAQTI 174
Query: 263 IANISLGKGAHVPLDVGFSDDRTGDIITLR--PLRDFSSKEVIYYNIFNDLSPVHVPSLA 320
N G V V + R D + LR PLR KEV Y NDL PV
Sbjct: 175 FLNHIRGD---VERLVRLAPTRELDGLILRSKPLRKIPEKEVALYAFLNDL-PVDYSECP 230
Query: 321 TLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK----LSLDLTSMNVNNTCLLCKA 376
+ +++ + DL+ N P T ++ DK L+ + T N++ C +C
Sbjct: 231 YAGE---AMRGEVRDVLNDLEVNHPGTKYSILSGFDKMVQILAKEYTQTNMSG-CQICGE 286
Query: 377 PLDTRADLASSSMG 390
P ++ A +G
Sbjct: 287 PCNSNTCQACKILG 300
>gi|452825507|gb|EME32503.1| hypothetical protein Gasu_02780 [Galdieria sulphuraria]
Length = 350
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 145/378 (38%), Gaps = 44/378 (11%)
Query: 62 KLCPRCNTNNGEVVLRLKDIY-CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
+LC C + +++ +D Y C+ C +Y + + +++P +++ + SG
Sbjct: 3 RLCSHCGKSFANILVGREDKYLCRCCFFEYFEDTVHRTIVEECLLQPGERIAIGASGGKD 62
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYF 180
S L ++L+ L+ + + + ID+G Y D
Sbjct: 63 STVLAYVLK---LLNERYYYNWDLWLLSIDEG-------------------IQGYRDDSL 100
Query: 181 TCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQA 240
+EQ + N+ LYT ++ L + D ++++ + S R+ L +
Sbjct: 101 RTVEQNRDDYNLPLYT-LSYSELYNWTMDQVVSQIGR-----KSNCTFCGVFRRQALDKG 154
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFS--------DDRTGDIITLR 292
+K+ + T D+A I+ N+ G A V D + I ++
Sbjct: 155 TEKIQANVLATGHNADDIAETILLNLLRGDHARFSRSVMEENANYRMSIDSDSKKIRRVK 214
Query: 293 PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVF 352
PL+ KE++ Y F L + P A A E ++ L+ P ++S +
Sbjct: 215 PLKRVYEKEIVMYAYFKKLKYFATECIYA---PFAYRGHARE-YLKSLERIRPHSISDIL 270
Query: 353 RTADKLSLDLTSMNVNNTCLLCKAPLD---TRADLASSSMGATRFSRYVSNATREQLSHV 409
+ +SL+ + V C+ C + +A L +S+ + V + LS
Sbjct: 271 YSLSCISLEDSKTRVGQQCIRCGSISSQNICKACLLRTSLDRGQGVLAVKRSGMAILSKN 330
Query: 410 IISSESPDHASKVTTDVN 427
+ SE P S+ +T+ N
Sbjct: 331 TVESEIPQTVSESSTESN 348
>gi|408392877|gb|EKJ72166.1| hypothetical protein FPSE_07653 [Fusarium pseudograminearum CS3096]
Length = 390
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 147/363 (40%), Gaps = 55/363 (15%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALG------KSKMMRPQDKVLVAF 115
+ C RC + LR D C+ C +Q++ +K LG +S + L
Sbjct: 9 RPCKRCKAEDAPFRLR-TDPTCRDCYIQFVTYKLNRRLGALHKDTRSSKALTTRRHLAGL 67
Query: 116 SGSHSSMALLHLLQEGMQLSSHKRI--LFSVCAIYIDDGSISQVSISERKANNAQIATAM 173
S SS L +L E + S + + ++ID ++S + E A +
Sbjct: 68 SFGPSSSVLAQILSEQARHHSENKASSPYEPVIVHIDT-NLSNIE-GESPAQKLVGEYSR 125
Query: 174 KYFDSYFTC--LEQALEPDNMKLYTDVAELPLEQFAKD----SEINKMFQTVTTLSSRQY 227
+ + F C L++ L ++ D + LPL+ D + + ++F + TL+SR
Sbjct: 126 AFPHATFECVPLKEVLSVKSI----DWSTLPLDAGTPDEDPTARLQRLFDALPTLTSRSD 181
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD 287
+L+ L ++LLLQ A+ CT + + T LA ++ ++ G+G VP+ V D
Sbjct: 182 VLRLLIRHLLLQKAQDHACTALLLGHSTTALAALTLSEVANGRGFAVPIQVA---DGMTT 238
Query: 288 IITLRPLRDFSSKEV------IYY---NIFNDLSPVH---VPSLATL--ADPLA------ 327
+ T + +++E +YY IF + + VPSL + ADP
Sbjct: 239 VCTYEAVEGGAAQETSRLEFPVYYPLREIFRNEMKQYIDLVPSLKEVVPADPAGTKAGSS 298
Query: 328 -------SLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDT 380
S+++ + ++ + V+ V RTA KL C C LD
Sbjct: 299 VVSHKDLSIEEVMARYFESVEEGYSGIVANVVRTAGKLE----RAPAETFCGSCGMSLDA 354
Query: 381 RAD 383
D
Sbjct: 355 EGD 357
>gi|417002016|ref|ZP_11941452.1| PP-loop family protein [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479605|gb|EGC82698.1| PP-loop family protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 269
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 110/269 (40%), Gaps = 38/269 (14%)
Query: 95 FRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 154
F A+ + ++ DKV VA SG S+ L L++E L H ++ F V I +D G
Sbjct: 22 FIKAVKEFSLINEGDKVAVAISGGKDSLLLAKLIEE---LHKHSKVKFDVEYICMDPGY- 77
Query: 155 SQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINK 214
K N Q+ + Y +K++ ++ DS++ +
Sbjct: 78 -------DKENRDQLEKNLAY----------------LKIHANIY---------DSQVFE 105
Query: 215 MFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHV 274
+ +T+T Y+ +R+ L AK+L C K+ D+ + N+ L G
Sbjct: 106 VAETITKGDYPCYMCARMRRGFLYAKAKELGCNKVALGHHMNDVIETTMMNV-LYAGNFK 164
Query: 275 PLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAE 334
+ D+ +RPL ++ + + DL ++ T + + +K E
Sbjct: 165 TMKPKLVAQNFDDMQLIRPLYYAHEDDIKRWRDYVDLVALNCACTVTKSSESYTRKKVKE 224
Query: 335 SFVTDLQTNFPSTVSTVFRTADKLSLDLT 363
++DL+ + P ++ R+A+ ++ D+
Sbjct: 225 -LISDLKKDNPDVEKSILRSAENVNCDMV 252
>gi|333988106|ref|YP_004520713.1| hypothetical protein MSWAN_1903 [Methanobacterium sp. SWAN-1]
gi|333826250|gb|AEG18912.1| protein of unknown function UPF0021 [Methanobacterium sp. SWAN-1]
Length = 311
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 125/327 (38%), Gaps = 48/327 (14%)
Query: 63 LCPRCNTNNGEVVLRLKD---IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
+C +C N V+++ K C+ C ++ K + K K++ DKVL+ SG
Sbjct: 3 VCTKCG--NPHVIIKKKQSGQKLCRECFIETTKEKVLHDIRKYKLIEKGDKVLLGLSGGK 60
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSIS----QVSISERKANNAQIATAMKY 175
S+ LL +L S +R + + A+ ID+G V I+ A + +
Sbjct: 61 DSVMLLDILN-----SLKERNIIDLVAVTIDEGITGYREDGVRIAASNAEKLGVKHRIVS 115
Query: 176 FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQN 235
F YF L D D+ E KDS++ + T R+
Sbjct: 116 FKDYF-----GLTLD------DIVE-------KDSDLARSRHPCTYCG-------VFRRW 150
Query: 236 LLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDI-ITLRPL 294
L + AK+ TKI T D I+ N G ++ S+ R + + ++PL
Sbjct: 151 FLNKVAKEEGATKIATGHNLDDETESILMNYLEGNIRNLTRIGPKSESRNKEFTVKIKPL 210
Query: 295 RDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRT 354
+ KE+ Y + + VH + S + F+ DL P+ + + R
Sbjct: 211 SEIPEKEIGLYVVAKGMD-VHFAGCPYAGE---SFRAEIGKFIKDLSVEHPTIMYSTLRG 266
Query: 355 ADKLSLDLTSMNVNNT----CLLCKAP 377
+K+ L + N + C+ C P
Sbjct: 267 FEKIKPVLKNEFANESSTGVCVNCGEP 293
>gi|342870149|gb|EGU73446.1| hypothetical protein FOXB_16084 [Fusarium oxysporum Fo5176]
Length = 349
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 46/222 (20%)
Query: 197 DVAELPLEQFAKDSEIN----KMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTA 252
D + LPL+ D + N ++F + TL+SR +L+ L ++LLLQ A++ +C+ +
Sbjct: 106 DWSTLPLDAVTPDDDANARLQRLFNALPTLTSRTDVLRQLIRHLLLQKAQEHSCSALLLG 165
Query: 253 ETQTDLATKIIANISLGKGAHVPLDV--------------GFSDDRTG--DIITLRPLRD 296
+ T LA ++ ++ G+G VPL V G + TG + PLR+
Sbjct: 166 HSTTALAALTLSEVANGRGFAVPLQVADGMTTVCTYEAVEGAAAQETGRLEFPVYYPLRE 225
Query: 297 FSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVT---------------DLQ 341
E++ Y DL VPSL + + KA S V+ ++
Sbjct: 226 IFRNELVQY---IDL----VPSLKEVVPVNQAGAKAGNSVVSHKDLSIEEVMTRYFDSVE 278
Query: 342 TNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRAD 383
+ V+ V RT KL + + C C LD D
Sbjct: 279 EGYAGIVANVVRTTTKLD----RVPGKSFCGSCGMSLDAEGD 316
>gi|21553405|gb|AAM62498.1| unknown [Arabidopsis thaliana]
Length = 458
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 118/292 (40%), Gaps = 35/292 (11%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI- 140
+C C + KFR A+ M+ P D VLVAFSG SS L + E +Q+ + K
Sbjct: 59 FCADCFRNNVFGKFRLAVTSHAMITPSDNVLVAFSGGSSSRVSLQFVHE-LQIKALKNYE 117
Query: 141 --------LFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNM 192
+F V ++D+ + A + ++ A+++ +C L P
Sbjct: 118 ASRDRSLPVFGVGVAFVDE-------TAAFPALSTEMIDAIEWVRYTVSC----LSPPAK 166
Query: 193 KLYTDVAELPLEQFAKDS-----EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
L+ E F DS + K+ +V + ++ LL L+ L + A +
Sbjct: 167 DLHVVQVE---SIFGSDSLDARDRLLKLLDSVPDDTGKEDLLLHLKMLSLQKVAAENGYN 223
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
++ + +A+ ++ G+G + D+ D R I L PLRD E+ +
Sbjct: 224 RLVLGSCTSRIASHVLTATVKGRGYSLSADIQHVDARWKVPIVL-PLRDCVRLEITRLCL 282
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
+ L V + + + SFV LQ PS T+ RTA KL+
Sbjct: 283 LDGLKTVELACRSQCG-----INDLVSSFVALLQEENPSRECTIVRTAAKLT 329
>gi|212533247|ref|XP_002146780.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210072144|gb|EEA26233.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 351
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 204 EQFAKDSEINKMFQ-TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
E F D E F+ +++T ++R + L L++ AK +C I ++ + LA K
Sbjct: 154 ENFGSDKERLDAFRASMSTTTARDDIDNLLLVRLIVAFAKNNDCRGILWGDSDSRLAAKT 213
Query: 263 IANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEV-IYYNIFNDLSPVHVPSLAT 321
+AN++ G+GA + V G + PLR+ E+ IY +L+ + +P L
Sbjct: 214 LANVAKGRGASLTWQVCDGVSPWGLHFSF-PLRELYKFELEIYVKQIPELASIIIPDLQV 272
Query: 322 L---ADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
A+ S+ +V +P ++ V RTA+KL TS C LC AP+
Sbjct: 273 QENEANRNLSIDNLMNLYVKTQGEKYPGVMANVVRTANKLR--PTSNTEAVKCSLCAAPV 330
Query: 379 DTRADLASSSM 389
D A L + +
Sbjct: 331 DQTATLCYACL 341
>gi|62751601|ref|NP_001015743.1| cytoplasmic tRNA 2-thiolation protein 1 [Xenopus (Silurana)
tropicalis]
gi|82179029|sp|Q5FW05.1|CTU1_XENTR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|58476345|gb|AAH89678.1| MGC107918 protein [Xenopus (Silurana) tropicalis]
Length = 341
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 105/295 (35%), Gaps = 37/295 (12%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK C + + +K+ P +KV + SG S L H+L+ L+
Sbjct: 25 CKDCFFHAFEEEIHHTIVSAKLFNPGEKVGIGASGGKDSTVLAHVLK---VLNERYAYGL 81
Query: 143 SVCAIYIDDG--SISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAE 200
+ + +D+G S+ K N Q +K Y ++
Sbjct: 82 DLILVSVDEGISGYRDDSLETVKRNQQQYELPLKIVS-----------------YQELYG 124
Query: 201 LPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLAT 260
++Q K L + R+ L + A L KI T D+A
Sbjct: 125 WTMDQIVKQ----------VGLKNNCTFCGVFRRQALDRGAMMLGVNKICTGHNADDIAE 174
Query: 261 KIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLA 320
++ N G A + + G I +PL+ KE++ Y F L S
Sbjct: 175 TVLMNFLRGDIARLRRCTSITTGSEGAIPRCKPLKYAYEKEIVLYAYFKKLDYF---STE 231
Query: 321 TLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL-DLTSMNVNNTCLLC 374
+ P A + A +F+ DL+ PS++ + + + LS+ + M V TC C
Sbjct: 232 CIYSPNA-YRGHARAFLKDLEAIRPSSIMDIIHSGENLSVKEDVRMPVQGTCTRC 285
>gi|320586309|gb|EFW98988.1| hypothetical protein CMQ_4840 [Grosmannia clavigera kw1407]
Length = 459
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 158/410 (38%), Gaps = 96/410 (23%)
Query: 64 CPRCNTNNGEVVLRL----KDIYCKACL------LQYLNH-------KFRAALGKSKMMR 106
C RC+ N+ + +R+ D YC+ L+ LN + R +G + R
Sbjct: 11 CKRCSVNDAVLKIRIDHVCSDCYCRFIATKTVKRLEVLNRDTRGTTPQHRQKVGSASEWR 70
Query: 107 PQDK---VLVAFSGSHSSMALLHLLQEGM--QLSSHKRILFSVCAIYIDDGSISQVSISE 161
+ L+ S SS +L+ + ++ + +L+ + F++ +++D + Q S ++
Sbjct: 71 ANNSKASFLLGLSFGQSSASLVAICEQIVVGRLAKGRDAAFTLHVVHVD--TDLQSSEAD 128
Query: 162 RKANNAQIATAMKYFDSY------FT----CLEQALE-----------PDNMKLYTDVAE 200
+ +++ + + D + FT L LE P + ++ +
Sbjct: 129 KNGASSEQSRVTQLLDRWRLRFPRFTFERVPLADVLELKAMDWSLLIPPGSEEMEENGGA 188
Query: 201 LPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLAT 260
P + + M + + SSRQ +L L + LL+ A N + + T LA
Sbjct: 189 APSSPLSPAGRLRAMLSRLPSASSRQDVLDMLVRRLLIARAVAANHRALLLGCSTTALAE 248
Query: 261 KIIANISLGKGAHVPLDV--GFSDDRTG------------DIITLRPLRDFSSKEVIYYN 306
+ +A + G+G +P + G + TG + PLR+ KE++ Y
Sbjct: 249 RTLAETAKGRGFSLPWQIHDGPPAEDTGADADGSARRPSTSTLLYYPLRELFRKELVTYT 308
Query: 307 IFN--DLSPVHVPSLATLADPLAS----------------LQKAAESFVTDLQTNFPSTV 348
L+ + P L + PL+S +++ + +++ N+PS V
Sbjct: 309 GLTQPSLADLVFPPLPSAVSPLSSAPAATPPAVVSHKHLSIEEVMARYFAEVEENYPSVV 368
Query: 349 STVFRTADKLSL-------------------DLTSMNVNNTCLLCKAPLD 379
+ V +TA KL + T+ + C +C PLD
Sbjct: 369 ANVVKTATKLERRDDVDDDEDTWTRASETTGERTTRRKYHGCGMCGMPLD 418
>gi|392595062|gb|EIW84386.1| hypothetical protein CONPUDRAFT_142698 [Coniophora puteana
RWD-64-598 SS2]
Length = 584
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 31/192 (16%)
Query: 212 INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKG 271
+ + T ++ Q ++TL + + L A + + T ++ +IA I+ G G
Sbjct: 257 LRAYLSALPTQTAVQSAVKTLMRVIALHTAHARRASHLLFGTPLTSVSVSLIAGIAQGDG 316
Query: 272 AHV------------PLDVGF-------------SDDRTGDIITLRPLRDFSSKEVIYYN 306
V P D S R + +RPLRD + KE Y
Sbjct: 317 YAVREELYEEWSPPLPSDPSIMREASRNGGGEEQSISRPRAVRLVRPLRDVTLKECALYA 376
Query: 307 IFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN 366
+N + + P LA + L K F+ L+ ++PSTVS +FRT K+ S+
Sbjct: 377 WWNSVEILGHPRLARAGQSIYGLTK---DFIMGLEKDYPSTVSAIFRTLAKVEPKDQSV- 432
Query: 367 VNNTCLLCKAPL 378
+ C++C+ P+
Sbjct: 433 --DWCVICQRPM 442
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 59 RADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL----------GKSKMMRPQ 108
R+ K+C RC +N G +V+R +YCK C + KFR AL + +
Sbjct: 24 RSAKVCIRCKSNMGNIVIR-HAVYCKDCFSPSVLTKFRKALESTINPPGTASSKNQFKAE 82
Query: 109 DKVLVAFSGSHSSMALLHLLQE 130
VLVA SG S LL +L +
Sbjct: 83 GGVLVALSGGLGSTVLLSILDD 104
>gi|343419185|emb|CCD19486.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 566
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 135/353 (38%), Gaps = 65/353 (18%)
Query: 63 LCPRCNTNNGEVVLR--LKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
LC +C + V R YC C + R +L +S + + ++VA SG HS
Sbjct: 3 LCFKCKAEHAVVCSRDGPGKPYCCRCFTDFCTRLIRDSLFRSCGLPCNEPMVVAVSGGHS 62
Query: 121 SMALLH---------LLQEG----------MQLSSHKRILFSV------CAIYIDDGSIS 155
SM +LH L+ G + L + I S+ C DG+
Sbjct: 63 SMMMLHQLGLLRMQNRLRPGDGYVAFELIPLHLQEVELIAPSLEEPQEPCVSSTKDGTHG 122
Query: 156 QVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPL-----------E 204
Q S+S A NA++ A F LE+ + + + A +PL
Sbjct: 123 QGSVS--GAGNAELRRAASGVIEQFEMLEELVRTHCTRW--EFASVPLFTPDEIIVVRYS 178
Query: 205 QFAKDSEINK----MFQTVTTLSSRQYLLQTLRQNLLLQAAKKL------------NCTK 248
+ +E+ + +L+SR+ L +R +L A +
Sbjct: 179 DYLSPTELRAFRLALHHPRLSLTSRELLHTRIRGRVLAIACVDMINRWKRARQVANGWHH 238
Query: 249 IFTAETQTDLATKIIANI-SLGKGAHVPLDVGFSDDR--TGDIITLRPLRDFSSKEVIYY 305
+ T E + + S G G +V V S R G + +RPLR +E++ Y
Sbjct: 239 MITGENALRCCVTALRELMSGGSGGNV---VHHSGHRGLVGQCVVMRPLRTLLPRELVMY 295
Query: 306 NIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
+ ++ + P+L T + + S+ + E+F + T++ +++ V T KL
Sbjct: 296 CSLHGIANGYTPTLGTYTN-IRSINRTLEAFFNSMMTSYRTSIFNVLNTVMKL 347
>gi|374106880|gb|AEY95789.1| FACR271Cp [Ashbya gossypii FDAG1]
Length = 461
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 150/364 (41%), Gaps = 59/364 (16%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL---------------GKSKMMRPQ 108
C RC T+ G +V R + +C C +++ KFR + K +
Sbjct: 3 CKRCTTSEGCLVSR-NETFCGECFSRFVLLKFRKQMMMDEYCQQVFKVLYADKHRTAVEA 61
Query: 109 DK------VLVAFSGSHSSMALLHLLQEGM--QLSSHKRILFSV----CAIYIDDGSISQ 156
D+ VLV S SS+A+L LL + + Q ++H R F V C D + +
Sbjct: 62 DEQNKRSVVLVPLSLGSSSLAMLDLLNQTLSEQRAAHNRTGFQVKVVLCGFSADMDELKR 121
Query: 157 VSISERKANNAQIATAMKYF-----DSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSE 211
++ S + A + +K++ S+ TC E + L D +++
Sbjct: 122 LAESLQTERLAMNSDCIKFYLLDLDRSFSTC-----EIHKLLLANDNHGSRKITTRENAT 176
Query: 212 INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKG 271
++ + + SSR +L RQ+L+ + A + I + T LA ++++ + G+G
Sbjct: 177 LSSILDQFSRRSSRDDMLWFARQHLIKKFASQHQVKVIMWGHSVTRLADEVMSLVIKGRG 236
Query: 272 AHVP--LDVGFSDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSP-VHVPSL-------- 319
A + LD D G + L PLRD E+ Y + L ++ SL
Sbjct: 237 AQIAATLDSTGMDVEYGALFKNLYPLRDVLISEIDAYCSLSKLQRYIYNYSLQGSLFIKS 296
Query: 320 ------ATLADPLA---SLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNT 370
A A P+A ++ + + ++ ++ + +ST+ RTA KL +++
Sbjct: 297 QDEAAQANRAVPMAKNMTINELTRQYFDAVEKDYSNVISTIVRTASKLDYPISNGTEVIH 356
Query: 371 CLLC 374
C +C
Sbjct: 357 CSIC 360
>gi|344304072|gb|EGW34321.1| hypothetical protein SPAPADRAFT_59736 [Spathaspora passalidarum
NRRL Y-27907]
Length = 381
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 45/293 (15%)
Query: 94 KFRAALGKSKMMRPQDKVLVAFSGSHSSMALL----HLLQEGMQLSSHK-RILFSVCAIY 148
K++ G+ + KVL+A SG SS+ LL LLQE Q +HK R F + +
Sbjct: 5 KYKVKYGEVAEKLGKQKVLLALSGGESSLVLLDIMSSLLQE--QFEAHKGRQGFELVVVN 62
Query: 149 IDDGSISQVS------ISERKANNAQIATAMKYFDSYFTCLEQALEPDNMK---LYTDVA 199
+D+ + ++ I + Q+ + K L+ ++ D +K L D
Sbjct: 63 LDEYKLKSLNSQCQDVIPKLLERYTQVKLSFKVL-----SLDSYIDQDTLKYISLNKDFT 117
Query: 200 ELPLE-QFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
E K+ +N++ ++ SS + LL + ++L+L+ A+ C I + T +
Sbjct: 118 GFVQELHRTKEYTLNELLESCQDKSSAEDLLSIVYESLILKTAEVEGCETIVYGHSMTRI 177
Query: 259 ATKIIANISLGKGA--HVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV 316
A +IIA G+G+ H + + + L PLRD E++ Y +L+P +
Sbjct: 178 ANEIIALTIKGRGSIIHKAIADHTTTYNNKEFKILFPLRDVLYVELLAYAQLAELTPYIL 237
Query: 317 PSLATLADPLASLQKAAES---FVTDLQTN---------FPSTVSTVFRTADK 357
++++QK+ + + DL TN + ST STV +T +K
Sbjct: 238 ---------ISTIQKSKITKNLTIRDLTTNYFKNLDATGYASTASTVVKTGEK 281
>gi|402079103|gb|EJT74368.1| hypothetical protein GGTG_08209 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 392
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 136/353 (38%), Gaps = 44/353 (12%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL------GKSKMMRPQDKVLV 113
A +LC RC N +R + C AC ++ K +SK+ R L+
Sbjct: 11 AARLCLRCKEQNALYEIR-SEPACGACFAAFVRVKVAKRFEVVDRESRSKVGRGTAHYLI 69
Query: 114 AFSGSHSSMALLHLLQEGMQLSSHKR--ILFSVCAIYIDDGSISQVSIS-ERKANNAQIA 170
S SS A++++ E + SS K+ + S +++D + S S R+ + A
Sbjct: 70 GLSLGPSSSAMVNIFDELDERSSKKQRPVSSSFRIVHVDTSLVDPPSTSPSRQLGRWEAA 129
Query: 171 TAMKYFDSYFTCLEQALEPDNMKLYTDVAELPL--EQFAKDSEINKMFQTVTTLSSRQYL 228
F++ L A ++ ++ LP D+ + +F + + +SR
Sbjct: 130 YPRFTFET--VPLTAAFSLPSIDWHS----LPRLNPDLPPDARLRDLFDRLPSSTSRADA 183
Query: 229 LQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKG----------AHVPLDV 278
+ +++L+ AA C + T LA +A + G+G AH +
Sbjct: 184 TRLFVRHILISAAAAHGCCALLLGNNTTSLAALTLAETAKGRGFSLPWLTNDGAHPVMAP 243
Query: 279 GFSDDR----TGDIITLRPLRDFSSKEVIYYNIFNDLSP--------VHVPSLATLADPL 326
DR T + PLR+ KE++ Y ++ S + ++
Sbjct: 244 NSGQDREEAATTSQVVHFPLRELYRKELVTYAGLVEMGKDKDLRIYGYERSSGSIVSHKD 303
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLD 379
S+ + D++ ++PS V+ V RT KLS C LC A +D
Sbjct: 304 QSIDDVMARYFEDIELSYPSVVANVVRTTAKLSRG----EPRQPCGLCGAAID 352
>gi|297526784|ref|YP_003668808.1| PP-loop domain-containing protein [Staphylothermus hellenicus DSM
12710]
gi|297255700|gb|ADI31909.1| PP-loop domain protein [Staphylothermus hellenicus DSM 12710]
Length = 331
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 133/333 (39%), Gaps = 60/333 (18%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
+CK L+Y + K R + + KM ++ ++VA SG S++LLH L LS KR+
Sbjct: 22 FCKKHFLEYFDKKVRRTIRRYKMFSSKEHIVVAVSGGKDSLSLLHYL---YNLS--KRVP 76
Query: 142 -FSVCAIYIDDGSISQVSISE----RKANNAQIATAMKYFDSYFT-CLEQALEPDNMKLY 195
+ + A+ ID+G I++ R N + + F+ YF L++ + K
Sbjct: 77 GWRITALLIDEGIRGYRDITKKDFLRVVNELGVDYKIASFEEYFGYTLDEIVRIGREK-- 134
Query: 196 TDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQ 255
+ LP R+ LL + A++L T + TA
Sbjct: 135 -GLPYLPCSYCG-----------------------VFRRYLLNKVARELGGTVLATAHNL 170
Query: 256 TDLATKIIANI---SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLS 312
D+ + NI S K + G D + ++P + KE Y+I N+L
Sbjct: 171 DDVVQTYVMNIINNSWDKILRLAPVTG-PLDHPKFVRRVKPFYEILEKETTLYSILNNLY 229
Query: 313 PVHVPSLATLADPLA--SLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN-- 368
P V P A +++ + +L+ +P T ++ R+ ++ +D+ S + +
Sbjct: 230 PKFVEC------PYARFNIRWMIRRQLNELEEKYPGTKYSLLRSLLRI-IDILSKHRDEI 282
Query: 369 -----NTCLLCKAPLD---TRADLASSSMGATR 393
TC +C P RA L +G R
Sbjct: 283 IHGEIKTCKVCGEPSAHEICRACLYRYELGIMR 315
>gi|254579318|ref|XP_002495645.1| ZYRO0B16346p [Zygosaccharomyces rouxii]
gi|238938535|emb|CAR26712.1| ZYRO0B16346p [Zygosaccharomyces rouxii]
Length = 461
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 151/380 (39%), Gaps = 78/380 (20%)
Query: 63 LCPRCNTNNGE--VVLRLKDIYCKACLLQYLNHKFRAALGKS-------KMMRPQDKVLV 113
LC RC GE V+L K+ +C C ++++ K R + K+M QDKV
Sbjct: 5 LCKRC----GEPAVILSRKEHFCSRCFCKFISSKQRKQMMSDPYFQDIFKVMH-QDKVRS 59
Query: 114 A--FSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIAT 171
A +SS +L L L S ++ V + ++++ ++R +
Sbjct: 60 AEQADAQNSSSRILAPLS----LGSSSTVMLDVL-----NDTLNEQKSTQRGRTGFYVDV 110
Query: 172 AMKYFDSYFTCLEQALEPDNMKLYTDVAE------LPLEQFAKDSEINKM---------- 215
+ Y +S F L+ +E + Y D E + LE F E K+
Sbjct: 111 LLCYLESEFQDLKNRVEELSAARYRDNQENIKFHFINLESFFDGQEFEKLIINDDYLCSS 170
Query: 216 ------------FQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKII 263
+ SSR+ LL + + L+ + A + N I + T LA + +
Sbjct: 171 KLDSDPYNLKDLLEQCPNRSSREDLLTFIIRRLVKRYAYQHNHKAILWGHSMTKLADETM 230
Query: 264 ANISLGKGAHVP--LDVGFSD-DRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLA 320
+ + G+G H+ D D D +G L PL+D EV Y L H+ +
Sbjct: 231 SLVVKGRGEHINSLFDSSQLDQDYSGKFRHLYPLKDVLLSEVDAYCYSAGLDK-HLVNY- 288
Query: 321 TLADPLASLQKAAES------------------FVTDLQTNFPSTVSTVFRTADKLSLDL 362
T D L LQK E+ + D++ ++ + +STV RTADKL+ +
Sbjct: 289 TAQDTLL-LQKRCETKASGKLIKNMTINEMVRKYFDDIEGDYSNVISTVVRTADKLA-EP 346
Query: 363 TSMNVNNTCLLCKAPLDTRA 382
+ N C LC+ + TR
Sbjct: 347 KLIEPNVKCSLCQGNIHTRG 366
>gi|401623942|gb|EJS42021.1| ncs2p [Saccharomyces arboricola H-6]
Length = 489
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 155/379 (40%), Gaps = 72/379 (18%)
Query: 64 CPRCNTNNGE--VVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR-------PQD----- 109
C RC+ + + V K+ +C C + +++ K R + K + R P D
Sbjct: 3 CQRCHVSGRKPATVNSRKERFCDECFINFVSIKQRKQMMKDEFFRNLFKVVYPLDQKESI 62
Query: 110 -KVLVAFSGSHSS----MALLH--LLQEGMQLSSHKRILFSVCAIYIDDGS--------- 153
K+L+ S S S + ++H LL++ Q ++H V I+ ++
Sbjct: 63 GKILLPLSPSDSGSLVMLDIVHDLLLEQLKQHNNHTGFTVDVLTIFTEENFPVVRERMES 122
Query: 154 -ISQVSISERKANN---AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVA------ELPL 203
+ + + K +N ++F+S ++ N +++T L L
Sbjct: 123 LVKEKMLELNKTSNIYKVHFININEFFNSTSEVSSLIIDDGNFEIFTKSRSVGGGNRLTL 182
Query: 204 EQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKII 263
++ + + +N SSR L ++ L+ A + I + T L+ II
Sbjct: 183 DEISGEYCLNN--------SSRTDLTSIMKVQLIKHFAYENGNNAIMWGHSMTKLSEVII 234
Query: 264 ANISLGKGAHVP--LDV-GFS--DDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV-- 316
+ + GKG+ + LD F DD+ + L P++D S E+ + +L+ +
Sbjct: 235 SLVVKGKGSQIATFLDTESFDNLDDKPCNYKNLYPMKDLLSVEIESFLQIKNLAKYLINA 294
Query: 317 ------PSLATLADPLASLQKA-----------AESFVTDLQTNFPSTVSTVFRTADKLS 359
PS + +P SL K + D+Q ++ + +STV RTADKL+
Sbjct: 295 EETNSKPSCSVTKNPSPSLDKQKLVKNMTINEITNKYFQDIQNDYSNIISTVLRTADKLT 354
Query: 360 LDLTSMNVNNTCLLCKAPL 378
+++M + C +C++ +
Sbjct: 355 EPISNMIKPSKCQICQSKI 373
>gi|449301911|gb|EMC97920.1| hypothetical protein BAUCODRAFT_56334, partial [Baudoinia
compniacensis UAMH 10762]
Length = 380
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 220 TTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVG 279
T+ +SRQ L Q L + L++ A + C I ++ T LA + ++ + G+G VP V
Sbjct: 174 TSPTSRQDLTQLLLRRLIVHHANQHACEAILWGDSTTRLAERTLSETAKGRGFAVPTTVA 233
Query: 280 FSD-DRTGDIITLRPLRDFSSKEVIYYN----------IFNDLSPVHVPSLATLADPLAS 328
D + + P+RD KEV+ Y + DLS T++ +
Sbjct: 234 DGDAEAVYGVPFYFPMRDLLRKEVVAYAGMIEPALDDCVVQDLSSTSSAG-KTVSMKNVT 292
Query: 329 LQKAAESFVTDLQTNFPSTVSTVFRTADKLSLD----LTSMNVNNT-----CLLCKAPL 378
+ + ++ +PS V+ V +TA KL L +++N + C LC+APL
Sbjct: 293 IDDLMTQYFESVEQEYPSIVANVVKTAGKLRLPKRTTTSALNGRGSGMEPHCELCEAPL 351
>gi|295677983|ref|YP_003606507.1| PP-loop domain-containing protein [Burkholderia sp. CCGE1002]
gi|295437826|gb|ADG16996.1| PP-loop domain protein [Burkholderia sp. CCGE1002]
Length = 333
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 110/278 (39%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 36 KEAYENNKLFKRLARQVGQAIGDYNMIEDGDKVMVCLSGGKDSYAMLDIL---MRLRERA 92
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T L+ +N Y+ V
Sbjct: 93 PINFDIVAVNLD---------------QKQPGFPEHVLPEYLTQLDIPFHIENQDTYSIV 137
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 138 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 180
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 181 LQTLLLNLFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYVKETDLEKYAELREF-PI- 233
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ V D + FP + +F
Sbjct: 234 IPCNLCGSQP--NLKRAEMKALVRDWEKRFPGRIENMF 269
>gi|70997325|ref|XP_753412.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|74673539|sp|Q4WVK2.1|CTU2_ASPFU RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|226711435|sp|B0Y1E7.1|CTU2_ASPFC RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|66851048|gb|EAL91374.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|159126861|gb|EDP51977.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
Length = 364
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 141/343 (41%), Gaps = 51/343 (14%)
Query: 84 KACLLQYLNHKFRAALGKSKMMR--PQD---KVLVAFSGSHSSMALLHLLQEGMQ---LS 135
+ C +++N K + ++ R P+ K+L+ S SS LLH+L +Q
Sbjct: 23 RTCYARFVNFKVFKRMENYRLRRNMPRTGPCKLLLPLSCGISSSVLLHILNAQIQHELAK 82
Query: 136 SHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNM--- 192
SH F + + I+ + I+ + +D F L+Q +
Sbjct: 83 SHPSPGFDLHLLVIEP---------------SSISHSSLSYDEGFELLQQTFPLHSFTRI 127
Query: 193 ------KLYTDVAELPLEQFAKDS-----------EINKMFQTVTTLSSRQYLLQTLRQN 235
+L ++ E+ + QF+KD ++ ++ T +S+ + L
Sbjct: 128 PLHSIFELDPELQEV-ISQFSKDGFVDDTGLSAKERLDAFRASIPTSTSKVDVDYILITR 186
Query: 236 LLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLR 295
L++ AKK+ C + +T T LA K +AN++ G+G+ + V G PLR
Sbjct: 187 LVVAFAKKIACRGVLWGDTDTRLAAKTLANVAKGRGSSLTWQVCDGMSPFGVEFNF-PLR 245
Query: 296 DFSSKEV-IYYNIFNDLSPVHVPSLATLADPLA---SLQKAAESFVTDLQTNFPSTVSTV 351
D EV Y + F +L+ + +P + L S+ + +V +P ++ V
Sbjct: 246 DLFKAEVDNYASFFPELTRIIIPDEPPSENVLTKNLSIDELMMRYVQTQGEKYPGVMANV 305
Query: 352 FRTADKLSLDLTSMNVNNTCLLCKA-PLDTRADLASSSMGATR 393
RTA KL L NV C C A L++ + + GA+R
Sbjct: 306 TRTASKLQASLMPANVPQ-CSFCGAFMLNSGNNDGGDTTGASR 347
>gi|345874855|ref|ZP_08826653.1| putative PP-loop ATPase [Neisseria weaveri LMG 5135]
gi|417958771|ref|ZP_12601684.1| putative PP-loop ATPase [Neisseria weaveri ATCC 51223]
gi|343966583|gb|EGV34839.1| putative PP-loop ATPase [Neisseria weaveri ATCC 51223]
gi|343969791|gb|EGV37997.1| putative PP-loop ATPase [Neisseria weaveri LMG 5135]
Length = 312
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 105/266 (39%), Gaps = 44/266 (16%)
Query: 91 LNHKFRAALGKS----KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCA 146
LN K R A+G + M+ DK++V SG S ALL +L+ QL + I F + A
Sbjct: 14 LNKKLRHAVGDAINDFNMIENGDKIMVCLSGGKDSYALLDILR---QLQASAPIEFELVA 70
Query: 147 IYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQF 206
+ +D Q E + + + Y + +E D + V E
Sbjct: 71 VNLDQ---KQPGFPEHVLPDYLESIGVPY---------KIVEEDTYSVVKRVLE------ 112
Query: 207 AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
+T +L SR LR+ +L + AK+L CTKI + D+ + N+
Sbjct: 113 --------EGKTTCSLCSR------LRRGILYRTAKELGCTKIALGHHRDDILGTLFLNM 158
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
G SD+ G+ I +RPL K++I Y P+ +P + P
Sbjct: 159 FYGGKLKAMPPKLVSDN--GEHIVIRPLAYVKEKDLIRYAELKQF-PI-IPCNLCGSQPN 214
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVF 352
Q E V D FP + ++F
Sbjct: 215 LQRQVIREMLV-DWDKRFPGRIESMF 239
>gi|342185526|emb|CCC95010.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 518
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 127/318 (39%), Gaps = 40/318 (12%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLL---------QEGM 132
YC C + R +L ++ M + ++VA SG ++SM LLH L + G
Sbjct: 24 YCSCCFTDFCTRLTRDSLFRNCGMPCDEPIVVAVSGGYTSMMLLHQLGVLRAQNNIRRGE 83
Query: 133 QLSSHKRILFSVC-AIYIDDGSISQVSI-----SERKANNAQIATAM-KYFDSYFT---- 181
+ + I +C A I G S V + +IA+ M + F++ +
Sbjct: 84 GRVAFELIPMHLCEAELIVPGKPSAVGTVADGDDQESGELRRIASMMAEQFENLKSLIRT 143
Query: 182 -CLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTV----TTLSSRQYLLQTLRQNL 236
C++ + + +V + + E++ + + + LS R+ L LR +
Sbjct: 144 RCVQWEFASEPLFTANEVQVVQYSDYLSPFEMSAVREVLHHPRLPLSQRELLHTRLRGRV 203
Query: 237 L-LQAAKKLNCTK-----------IFTAETQTDLATKIIANISLG-KGAHVPLDVGFSDD 283
L L AA +N + + T E + + + G +G + G+
Sbjct: 204 LALAAADCINAWRRVRQSASGWHHVLTGENALNCCVAALREVLSGSEGKRIAHLAGYRG- 262
Query: 284 RTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTN 343
G + +RPLR +E + Y N + PSL+TL L SL + E F ++
Sbjct: 263 WVGQCLVMRPLRALIPREAVIYCRLNGIEASFTPSLSTLT-ALRSLDRTLEVFFNNMLCT 321
Query: 344 FPSTVSTVFRTADKLSLD 361
+ ++V V T KL ++
Sbjct: 322 YRTSVFNVLNTVTKLDVE 339
>gi|425772241|gb|EKV10652.1| hypothetical protein PDIP_59270 [Penicillium digitatum Pd1]
gi|425777420|gb|EKV15594.1| hypothetical protein PDIG_24790 [Penicillium digitatum PHI26]
Length = 350
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 124/295 (42%), Gaps = 43/295 (14%)
Query: 107 PQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANN 166
P+ ++L+ S SS LLH+L QL +D+G
Sbjct: 36 PKTQLLLPLSLGVSSSVLLHILNTDRQLR-------------LDNGRPLGYDFKILVIEP 82
Query: 167 AQIATAMKYFDSYFTCLEQALEPDNMK------LYTDVAELP--LEQFA----------- 207
+ +A FD + LE+ N+ ++ V E+ + ++A
Sbjct: 83 STVAATGVLFDQKYEALEKNFSLHNISRIPFHSIFDHVPEMEEIMHEYAGSKFIDDRSRS 142
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
+ + +++T +SR + L L+++ AKK C + ++ + LA K +A ++
Sbjct: 143 NEERLAAFRASISTPTSRADVDTVLLTRLIVEFAKKSGCESVIWGDSDSRLAAKALAGVA 202
Query: 268 LGKGAHVPLDVGFSDDRTGDIITLR-PLRDFSSKEVI-YYNIFNDLSPVHVPSLATLADP 325
G+GA + V SD + + PLRD E++ Y ++ +LS + +P +
Sbjct: 203 KGRGASLTWQV--SDGMSPWGVRFEYPLRDLYKAELLQYASVCVELSDIIIPDQPPSDNV 260
Query: 326 LA---SLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNN-TCLLCKA 376
L S+ + +V + +P ++ V RTA+KL+ S +V+ TC LC
Sbjct: 261 LTKNLSIDELMLRYVQNQGAKYPGVMANVARTANKLN---PSTSVSALTCGLCAG 312
>gi|45185957|ref|NP_983673.1| ACR271Cp [Ashbya gossypii ATCC 10895]
gi|74694752|sp|Q75BK0.1|CTU2_ASHGO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|44981747|gb|AAS51497.1| ACR271Cp [Ashbya gossypii ATCC 10895]
Length = 461
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 151/364 (41%), Gaps = 59/364 (16%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL---------------GKSKMMRPQ 108
C RC T+ G +V R + +C C +++ KFR + K +
Sbjct: 3 CKRCTTSEGCLVSR-NETFCGECFSRFVLLKFRKQMMMDEYCQQVFKVLYADKHRTAVEA 61
Query: 109 DK------VLVAFSGSHSSMALLHLLQEGM--QLSSHKRILFSV----CAIYIDDGSISQ 156
D+ VLV S SS+A+L LL + + Q ++H R F V C D + +
Sbjct: 62 DEQNKRSVVLVPLSLGSSSLAMLDLLNQTLSEQRAAHNRTGFQVKVVLCGFSADMDELKR 121
Query: 157 VSIS---ERKANNAQ-IATAMKYFD-SYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSE 211
++ S ER A N+ I + D S+ TC E + L D +++
Sbjct: 122 LAESLQTERLAMNSDCIKLYLLDLDRSFSTC-----EIHKLLLANDNHGSRKIATRENAT 176
Query: 212 INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKG 271
++ + + SSR +L RQ+L+ + A + I + T LA ++++ + G+G
Sbjct: 177 LSSILDQFSRRSSRDDMLWFARQHLIKKFASQHQVKVIMWGHSVTRLADEVMSLVIKGRG 236
Query: 272 AHVP--LDVGFSDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSP-VHVPSL-------- 319
A + LD D G + L PLRD E+ Y + L ++ SL
Sbjct: 237 AQIAATLDSTGMDVEYGALFKNLYPLRDVLLSEIDAYCSLSKLQRYIYNYSLQGSLFIKS 296
Query: 320 ------ATLADPLA---SLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNT 370
A A P+A ++ + + ++ ++ + +ST+ RTA KL +++
Sbjct: 297 QDEAAQANRAVPMAKNMTINELTRQYFDAVEKDYSNVISTIVRTASKLDYPISNGTEVIY 356
Query: 371 CLLC 374
C +C
Sbjct: 357 CSIC 360
>gi|148679740|gb|EDL11687.1| RIKEN cDNA 2310061F22 [Mus musculus]
Length = 171
Score = 53.1 bits (126), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 53/84 (63%)
Query: 86 CLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVC 145
C + HKFRA LGK++++ P +KVL+++SG SS +++ + EG+ S KR+ F
Sbjct: 25 CFKAFYVHKFRAMLGKNRVIFPGEKVLLSWSGGPSSSSMVWQVLEGLSQDSAKRLRFVPG 84
Query: 146 AIYIDDGSISQVSISERKANNAQI 169
IY+D+G+ S+ +R+ A++
Sbjct: 85 VIYVDEGAACGQSLEDRQKTVAEV 108
>gi|312134203|ref|YP_004001541.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
owensensis OL]
gi|311774254|gb|ADQ03741.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
owensensis OL]
Length = 303
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + R +C+ C L Y N++ + + K +M +DK+LV SG SMA
Sbjct: 3 CVRCKGKGIIYLKRHNAAFCQDCFLYYYNNQVKKNIKKHRMFDKKDKILVVISGGKDSMA 62
Query: 124 LLHLL-QEGMQLSSHKRILFSVCAIYIDDGSISQVS 158
L H+L +EG ++V +YI+ G I Q S
Sbjct: 63 LWHILAKEG----------YNVTGMYINLG-IGQYS 87
>gi|257065750|ref|YP_003152006.1| PP-loop domain-containing protein [Anaerococcus prevotii DSM 20548]
gi|256797630|gb|ACV28285.1| PP-loop domain protein [Anaerococcus prevotii DSM 20548]
Length = 269
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 107/269 (39%), Gaps = 38/269 (14%)
Query: 95 FRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 154
F A+ + ++ DKV VA SG S+ L L++E L H R+ F V I +D G
Sbjct: 22 FIKAVKEFSLINEGDKVAVAISGGKDSLILAKLIEE---LHKHSRVKFDVEYISMDPG-- 76
Query: 155 SQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINK 214
Y + LE+ L A L ++ DSE+ +
Sbjct: 77 --------------------YDNENRDLLEKNL-----------AYLNIDGTIYDSEVFE 105
Query: 215 MFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHV 274
+ +T+T Y+ +R+ L AK+L C K+ D+ + N+ L G
Sbjct: 106 VAETITKGDYPCYMCARMRRGFLYAKAKELGCNKVALGHHMNDVIETTMMNV-LYAGNFK 164
Query: 275 PLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAE 334
+ D+ +RPL ++ + + LS ++ T + + +K E
Sbjct: 165 TMKPKLIAQNFEDMELIRPLYYLHEDDIKRWRDYVALSALNCACTVTKSSESYTRKKIKE 224
Query: 335 SFVTDLQTNFPSTVSTVFRTADKLSLDLT 363
+ +L+ + P ++ R+A+ ++ D+
Sbjct: 225 -LIAELKKDNPEVEKSILRSAENVNCDMV 252
>gi|400598877|gb|EJP66584.1| cytoplasmic tRNA 2-thiolation protein 2 [Beauveria bassiana ARSEF
2860]
Length = 397
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 143/367 (38%), Gaps = 59/367 (16%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALG-------KSKMMRPQDKVLVAFS 116
C RC N LR C+ C ++++ KFR ++G S + P+ + L S
Sbjct: 10 CKRCKVENAPYKLR-NLATCRDCYVEHVVGKFRRSIGTMHKDIRASADLAPR-RYLAGLS 67
Query: 117 GSHSSMALLHLLQEGMQLSSHKRI--LFSVCAIYIDDGSISQVSISERKANNAQIATAMK 174
SS L +L + + + K+ F +++D + + A K
Sbjct: 68 FGVSSTCLAQMLDDSARHHAAKQSSSAFEPLILHVDTDLTATIDDDTTPARRLLARYRQK 127
Query: 175 YFDSYFTC--LEQALEPDNMKLYTDVAELPLEQFA---KDSE--------INKMFQTVTT 221
Y F C L +A+ + T +P +Q + KD + + ++F + +
Sbjct: 128 YPHVSFDCVHLSRAVALKTVDWST---LMPADQASARVKDGDAGASDADRLRRVFDALPS 184
Query: 222 LSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVG-- 279
++SR +L+ L +++L+ AA+ + + + LA +A ++ G+G VP VG
Sbjct: 185 VTSRADVLRLLVRHILIDAARTRGYDVVLLGHSTSALAALTLAEVANGRGFSVPGQVGDG 244
Query: 280 ----FSDDRTGD------IITLRPLRDFSSKEVIYYNIFNDLSPVHVP-SLATLADPL-- 326
+ D G+ PLR+ E++ Y DL P V L D L
Sbjct: 245 LQTVCAYDAAGNETSRSSFPVYYPLREVLKNELVGYV---DLIPALVEMKEEGLVDGLTS 301
Query: 327 ----------ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKA 376
S+++ + + ++ + V+ V RTADKL C LC
Sbjct: 302 CGSQVVSHRDVSIEEVMQRYFDGVEGPYAGIVANVVRTADKLD----RAAGGAFCRLCGM 357
Query: 377 PLDTRAD 383
LD D
Sbjct: 358 TLDESGD 364
>gi|56756777|gb|AAW26560.1| SJCHGC09507 protein [Schistosoma japonicum]
Length = 157
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 282 DDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLAS----------LQK 331
D+R D+ +RPLRDF +KE+ + F +L + T DPL S L++
Sbjct: 2 DERYKDVTIIRPLRDFLAKELTLFAHFMELESI------TPNDPLTSIILKNPSINTLER 55
Query: 332 AAESFVTDLQT-NFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL------DTRADL 384
+ F+ LQ FPST T+ RT+ K+ L+ VN C C P+ D L
Sbjct: 56 LTQDFLASLQAGGFPSTTGTILRTSSKVVLE-NDTQVN--CSFCHYPICNTESSDDPDKL 112
Query: 385 ASSSMGATRFSRYVSNATREQLSHVIISSE 414
A+ SM ++S +SN + S V I E
Sbjct: 113 ATESM---KYSFLLSNPS--SCSEVTIPEE 137
>gi|15679734|ref|NP_276852.1| hypothetical protein MTH1742 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622874|gb|AAB86212.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 270
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 40/282 (14%)
Query: 101 KSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSIS 160
K K++ D+VLV SG S+ ++ +L E +R + + A+ ID+G I
Sbjct: 6 KYKLIERGDRVLVGLSGGKDSVMVIDILDE-----LRERNIIELEAVTIDEG------IG 54
Query: 161 ERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVT 220
+ + +IA + C ++ + P + D A + L++ K+ ++
Sbjct: 55 GYREDGVRIARKI--------CADRGI-PHRVVSLEDYAGITLDEIMKNPS-----RSAC 100
Query: 221 TLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF 280
T R+ +L + A+K TKI T D I+ N G ++
Sbjct: 101 TYCG------VFRRWILNREARKSKATKIATGHNLDDETQAIVMNYLEGNLENLTRIGPM 154
Query: 281 SDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTD 339
+ G I ++PLR+ KEV Y + L VH LA S ++ F+
Sbjct: 155 TSSAGGRFIPKIKPLREIPEKEVALYVLARGLD-VH---LAGCPYASGSFRREIGDFLKQ 210
Query: 340 LQTNFPSTVSTVFRTADK----LSLDLTSMNVNNTCLLCKAP 377
+ P+ + + R D+ L DL+ + C+ C P
Sbjct: 211 ISVKRPTIMYSTLRGFDRIKEILRRDLSESGRSGICVKCGEP 252
>gi|381400905|ref|ZP_09925824.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Kingella kingae
PYKK081]
gi|380834189|gb|EIC14038.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Kingella kingae
PYKK081]
Length = 316
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 106/267 (39%), Gaps = 46/267 (17%)
Query: 91 LNHKFRAALGKS----KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCA 146
LN + R A+G + M+ DK++V SG S ALL +L+ QL + I F + A
Sbjct: 14 LNKRLRHAVGDAINDFNMIENGDKIMVCLSGGKDSYALLDILR---QLQASAPIEFELIA 70
Query: 147 IYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQF 206
+ +D Q Y T + + Y+ V + LE+
Sbjct: 71 VNLD---------------QKQPGFPEHVLPEYLTSIGVPFKIVEEDTYSTVKRV-LEEG 114
Query: 207 AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
+T +L SR LR+ +L + AK+L CTKI + D+ + N+
Sbjct: 115 ----------KTTCSLCSR------LRRGILYRTAKELGCTKIALGHHRDDIIATLFLNM 158
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
G SD+ G+ I +RPL K++I Y + P+ +P L
Sbjct: 159 FYGGKLKAMPPKLVSDN--GEHIVIRPLAYVKEKDLIKYAELKEF-PI-IP--CNLCGSQ 212
Query: 327 ASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+LQ+ + D FP + ++F
Sbjct: 213 PNLQRQVIGDMLKDWDKRFPGRIESMF 239
>gi|148234178|ref|NP_001090363.1| cytoplasmic tRNA 2-thiolation protein 1 [Xenopus laevis]
gi|123913902|sp|Q05AW7.1|CTU1_XENLA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|116063404|gb|AAI23241.1| MGC154488 protein [Xenopus laevis]
Length = 341
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 108/293 (36%), Gaps = 33/293 (11%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK C + + +K+ P +KV + SG S L H+++ L+
Sbjct: 25 CKDCFFYAFEEEIHNTIVSAKLFHPGEKVGIGASGGKDSTVLAHVMK---VLNERYAYGL 81
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
+ + +D+G IS + ++ Q + +Q P + Y ++
Sbjct: 82 DLILLSVDEG------ISGYRDDSLQTVKRNQ---------QQYELPLKIVSYLELYGWT 126
Query: 203 LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
++Q K L + R+ L + A L KI T D+A +
Sbjct: 127 MDQIVKQ----------VGLKNNCTFCGVFRRQALDRGAMMLGINKICTGHNADDIAETV 176
Query: 263 IANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATL 322
+ N G A + + G I +PL+ KE++ Y F L S +
Sbjct: 177 LMNFLRGDIARLRRCTAITTGSEGAIPRCKPLKYTYEKEIVLYAYFKKLDYF---STECI 233
Query: 323 ADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDL-TSMNVNNTCLLC 374
P A + A F+ DL+ PS++ + + + LS++ M V TC C
Sbjct: 234 YSPNA-YRGHARVFLKDLEAIRPSSIIDIIHSGENLSVNEDVRMPVQGTCTRC 285
>gi|333375186|ref|ZP_08467010.1| PP-loop family protein [Kingella kingae ATCC 23330]
gi|332971603|gb|EGK10553.1| PP-loop family protein [Kingella kingae ATCC 23330]
Length = 316
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 107/267 (40%), Gaps = 46/267 (17%)
Query: 91 LNHKFRAALGKS----KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCA 146
LN + R A+G + M+ DK++V SG S ALL +L+ QL + I F + A
Sbjct: 14 LNKRLRHAVGDAINDFNMIENGDKIMVCLSGGKDSYALLDILR---QLQASAPIEFELIA 70
Query: 147 IYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQF 206
+ +D Q Y T + + Y+ V + LE+
Sbjct: 71 VNLD---------------QKQPGFPEHVLPEYLTSIGVPFKIVEEDTYSTVKRV-LEEG 114
Query: 207 AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
+T +L SR LR+ +L + AK+L CTKI + D+ + N+
Sbjct: 115 ----------KTTCSLCSR------LRRGILYRTAKELGCTKIALGHHRDDIIATLFLNM 158
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
G SD+ G+ I +RPL K++I Y + P+ +P + P
Sbjct: 159 FYGGKLKAMPPKLVSDN--GEHIVIRPLAYVKEKDLIKYAELKEF-PI-IPCNLCGSQP- 213
Query: 327 ASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+LQ+ + D FP + ++F
Sbjct: 214 -NLQRQVIGDMLKDWDRRFPGRIESMF 239
>gi|302390349|ref|YP_003826170.1| PP-loop domain-containing protein [Thermosediminibacter oceani DSM
16646]
gi|302200977|gb|ADL08547.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
Length = 316
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 64 CPRCNTNNGEVVL-RLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C RC + E+ L R +C C Y + + R + + KM P+D+VLV SG SM
Sbjct: 3 CRRCG-DKAEIYLKRHNAAFCSDCFQVYYSEQVRRNIRREKMFGPKDRVLVVVSGGKDSM 61
Query: 123 ALLH-LLQEGMQLSSHKRILFSVCAIYIDDG 152
AL H LL+EG + V A+YI+ G
Sbjct: 62 ALWHILLKEG----------YDVTAMYINLG 82
>gi|312128625|ref|YP_003993499.1| PP-loop domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311778644|gb|ADQ08130.1| PP-loop domain protein [Caldicellulosiruptor hydrothermalis 108]
Length = 303
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + R +C+ C L Y N++ + + + KM +DK+LV SG SMA
Sbjct: 3 CVRCKGKGIIYLKRHNAAFCQDCFLYYYNNQVKKNIKRHKMFDKKDKILVVISGGKDSMA 62
Query: 124 LLHLL-QEGMQLSSHKRILFSVCAIYIDDGSISQVS 158
L H+L EG ++V +YI+ G I Q S
Sbjct: 63 LWHILASEG----------YNVTGMYINLG-IGQYS 87
>gi|227500613|ref|ZP_03930662.1| PP-loop family ATPase [Anaerococcus tetradius ATCC 35098]
gi|227217200|gb|EEI82544.1| PP-loop family ATPase [Anaerococcus tetradius ATCC 35098]
Length = 269
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 104/269 (38%), Gaps = 38/269 (14%)
Query: 95 FRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 154
F A+ + ++ DKV VA SG S+ L L++E L H ++ F V I +D G
Sbjct: 22 FIKAIKEFSLINEGDKVAVAISGGKDSLILAKLIEE---LHKHSKVKFDVAYISMDPGY- 77
Query: 155 SQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINK 214
K N + +KY L ++ DSE+ +
Sbjct: 78 -------DKENRELLEENIKY-------------------------LNIDATIYDSEVFE 105
Query: 215 MFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHV 274
+ +T+T + Y+ +R+ L AK+L C K+ D + N+ L G
Sbjct: 106 VAETITKGAYPCYMCARMRRGFLYNKAKELGCNKLALGHHMNDAIETTMMNV-LYAGNFK 164
Query: 275 PLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAE 334
+ + +RPL ++ + + L ++ T + + +K E
Sbjct: 165 TMKPKLRAQNFEGMELIRPLYYLHEDDIKRWRDYVGLKALNCACTVTKSSESYTRKKIKE 224
Query: 335 SFVTDLQTNFPSTVSTVFRTADKLSLDLT 363
+ DL+ + P ++ R+A+ ++ D+
Sbjct: 225 -LIADLKKDNPEVEKSILRSAENVNCDMV 252
>gi|336370269|gb|EGN98609.1| hypothetical protein SERLA73DRAFT_107665 [Serpula lacrymans var.
lacrymans S7.3]
Length = 531
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 283 DRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQT 342
D + +RPLRD KE Y +N++ V L+ + L K F+ L+
Sbjct: 301 DMLNSVRVVRPLRDIVMKECAAYARWNNVKVVGREKLSGANHGIGGLTK---DFIVGLER 357
Query: 343 NFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAP 377
++PSTVST+ RT KL+ N + CLLC+ P
Sbjct: 358 DYPSTVSTIARTCAKLA---PKDNPDGICLLCQRP 389
>gi|256273828|gb|EEU08750.1| Ncs2p [Saccharomyces cerevisiae JAY291]
Length = 493
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 155/388 (39%), Gaps = 89/388 (22%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF-------- 115
CP N VV R K+ +C C +++++ K R + K + R KV+ F
Sbjct: 6 CPASARNPATVVSR-KEKFCDECFIKFVSTKQRKQMMKDEYFRNLFKVIYPFEKEGSVSK 64
Query: 116 ---------SGSHSSMALLH--LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKA 164
SGS + ++H LL++ Q ++ V ++ ++ VS+ + +
Sbjct: 65 ILLPLSLSDSGSLVMLDIVHDLLLEQTKQHNNRTGFTVDVLTVFTEEN----VSVIKERM 120
Query: 165 NN------AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP--------LEQFAKDS 210
+ +Q+ F+ +F D + + + +E+ E F+K
Sbjct: 121 ESLINEKMSQLNKISNIFNVHFI--------DVNEFFNNASEVSTFIIDNENFEIFSKSK 172
Query: 211 EINKMFQTVTTL-----------SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLA 259
++ + TL SSR L+ ++ L+ A + I + T L+
Sbjct: 173 SVDD--SNILTLKEILGKYCLNNSSRSDLISIIKTQLIKHFAYENGYNAIMWGHSMTKLS 230
Query: 260 TKIIANISLGKGAHVPLDVGFSDDRTGDIIT--------LRPLRDFSSKEVIYYNIFNDL 311
II+ + GKG+ + F D + D + L P++D S E+ + +L
Sbjct: 231 EVIISLVVKGKGSQI---ATFLDSESFDTLNNKPCKYKNLYPMKDLLSVEIESFLQIRNL 287
Query: 312 SPVHVPSLATLADP--------LASL--QKAAES---------FVTDLQTNFPSTVSTVF 352
+ + T P L SL QK ++ + D+Q ++ + +STV
Sbjct: 288 AQFLINVEETNVKPNCLIARKSLPSLGQQKLVKNMTINEITNKYFQDIQNDYSNIISTVL 347
Query: 353 RTADKLSLDLTSMNVNNTCLLCKAPLDT 380
RTADKL+ +SM + C +C++ + T
Sbjct: 348 RTADKLTQPKSSMAKPSQCQICQSKIYT 375
>gi|388854630|emb|CCF51787.1| uncharacterized protein [Ustilago hordei]
Length = 660
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 20/152 (13%)
Query: 228 LLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD 287
L + L LL A + +C+ + ++ T ++ ++I +++ G G +P+ G D
Sbjct: 294 LHRILIATLLRSTASEYDCSALLLGDSATRISIRLIEDLAKGAGHKLPVQ-GSDAVWIDD 352
Query: 288 IITLRPLRDFSSKEVIYYNIFNDLSPV----HVPSLATLAD-----------PL---ASL 329
++ +RPL+ +E+++Y L P+ HV L+T++ P +S+
Sbjct: 353 LLVVRPLKGHLMQEILFYTSALGLEPLFPEQHV-VLSTVSTNDICSNTNSNVPAMDKSSI 411
Query: 330 QKAAESFVTDLQTNFPSTVSTVFRTADKLSLD 361
K E+F+ +L+ PSTV+T+ +T KL L+
Sbjct: 412 AKLTETFILNLEKGVPSTVTTIGKTGSKLVLN 443
>gi|375092269|ref|ZP_09738553.1| hypothetical protein HMPREF9709_01415 [Helcococcus kunzii ATCC
51366]
gi|374561343|gb|EHR32684.1| hypothetical protein HMPREF9709_01415 [Helcococcus kunzii ATCC
51366]
Length = 284
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 111/272 (40%), Gaps = 47/272 (17%)
Query: 94 KFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 153
KF AL + ++ DK+ V SG S+ L +LQ QL R+ + V I +D G
Sbjct: 30 KFLRALDQYNLIEEGDKIAVGMSGGKDSLILAKMLQ---QLQKFSRVKYEVEYIAMDPGF 86
Query: 154 ISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEIN 213
+ N ++ +Y D +P++ F +
Sbjct: 87 SPE--------NRQKLEDICRYMD-----------------------IPVKIFETN---- 111
Query: 214 KMFQTVTTLS--SRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKG 271
+F+ V +S S YL +R+ L AK+L C K+ D+ I+ NI + G
Sbjct: 112 -IFEVVHEISKDSPCYLCARMRRGNLYAKAKELGCNKLALGHHFNDVIETIMMNI-MWNG 169
Query: 272 AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH--VPSLATLADPLASL 329
++ + + +RPL K++I + + + P+ P + D S
Sbjct: 170 SYRSMMPKLKSRNFEGLELIRPLYLVEEKDIIRWINYTGIIPMDEACPIMEKKND---SQ 226
Query: 330 QKAAESFVTDLQTNFPSTVSTVFRTADKLSLD 361
++ + + +L+ + P+ +F++A+ +++D
Sbjct: 227 RQNIKEMIANLKKDNPNIEKNIFKSAENVAVD 258
>gi|367010710|ref|XP_003679856.1| hypothetical protein TDEL_0B05160 [Torulaspora delbrueckii]
gi|359747514|emb|CCE90645.1| hypothetical protein TDEL_0B05160 [Torulaspora delbrueckii]
Length = 472
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 144/348 (41%), Gaps = 53/348 (15%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL---------------------GK 101
+C RC + VV R K+ +C C ++++ K R + +
Sbjct: 11 VCRRCRLQDASVVSR-KEWFCNECFQKFVSAKQRKQMMCEPYFQDIFKVLYQDKIRSAEE 69
Query: 102 SKMMRPQDKVLVAFSGSHSSMALLHLLQEGM--QLSSHK-----RILFSVCAIYIDDGSI 154
+ + Q KVLV S SS+ +L +L E + Q + + +I +C DD
Sbjct: 70 AGLQNQQSKVLVPLSFGSSSLVMLDILNETLTEQKQTQRGNTGFQIDVLICLKAGDDRDT 129
Query: 155 SQVSI----SERKA-NNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKD 209
Q + ER A N+ ++ +S++ + + DN + + L+ +++
Sbjct: 130 YQKIVKELHEERYAMNHEKLKFHFISEESFYDGELRTILLDNQGFASKSIKGQLD-LSQN 188
Query: 210 SEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG 269
S + K+ SSR+ L ++++L+ + A + N I + T LA + I+ I G
Sbjct: 189 STVEKLLAQCPDKSSRKDLDTFIQRHLIKKYAYQHNHKAILWGHSMTKLADETISLIVKG 248
Query: 270 KGAHV-PL--DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLAT---LA 323
+G+ + PL D + + PL+D E+ Y L V +A L
Sbjct: 249 RGSQISPLLSDTELNPLYENKFKNMFPLKDVLLSEIDAYCYTKGLEGFLVGYVAQDTLLV 308
Query: 324 DPLA------------SLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
+ + S+ + A + D++ ++ + +STV RTA KL+
Sbjct: 309 NKIGDSKQPTKMVKQLSINEIARGYFDDVEADYSNVISTVVRTAYKLA 356
>gi|431792140|ref|YP_007219045.1| tRNA(Ile)-lysidine synthetase [Desulfitobacterium dichloroeliminans
LMG P-21439]
gi|430782366|gb|AGA67649.1| tRNA(Ile)-lysidine synthetase [Desulfitobacterium dichloroeliminans
LMG P-21439]
Length = 478
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 136/343 (39%), Gaps = 56/343 (16%)
Query: 103 KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIY--IDDGSISQVSIS 160
K + P ++LVA SG SMAL H+L M+ + H+ I + ++ + S + +
Sbjct: 12 KQIPPGSRILVAVSGGPDSMALAHILWRFMKENQHQEISLVLTHVHHGVRKESDEEEKMV 71
Query: 161 ERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVT 220
R A + +I + FDS + +AK + K FQT
Sbjct: 72 TRMARDWKIPCLIHRFDS-------------------------KGYAKS--VGKSFQT-- 102
Query: 221 TLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF 280
++R++ ++L ++ NC+ + TA D A ++ + G G+ G
Sbjct: 103 --AAREWRYARWEEDL-----QQENCSLLATAHHLGDQAETVLYRLLRGSGS-----AGL 150
Query: 281 SDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDL 340
+ +RPL + +E++ Y +L P + + ADP+ + K + +L
Sbjct: 151 AGIYPQKGKLIRPLLGVAKEEILQYCRSENL-PYAID--CSNADPIYTRNKIRLELLPEL 207
Query: 341 QTNF-PSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYV- 398
Q + P + T+ R A+ L D + + L++ + A + +
Sbjct: 208 QREYNPQIMVTLGRMAELLRWDEEYLEEKTEEAWQEVALESTEQRVVLHVKAFELPKAIL 267
Query: 399 SNATREQLSHVIISSESP-----DHASKVTTDVNQTVGSQDIP 436
S R+ +S V S P + ++ + Q SQD+P
Sbjct: 268 SRLIRKAVSRV---SGEPRGIGYSYVDRIIASLGQVGWSQDLP 307
>gi|320580621|gb|EFW94843.1| ATPase, putative [Ogataea parapolymorpha DL-1]
Length = 363
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 114/309 (36%), Gaps = 42/309 (13%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDI--YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF 115
SR LC RC N V+ R K++ CK C + + K K+ P +KV +
Sbjct: 3 SRTPNLCQRCEANKA-VMRRPKNLQKLCKECYFHVFETEIHLTIEKEKLFYPGEKVAIGA 61
Query: 116 SGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
SG S L +L+ L+ + + ID+G + Y
Sbjct: 62 SGGKDSTVLASILK---TLNERYNYGVHLVLLSIDEGIVG-------------------Y 99
Query: 176 FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLS---SRQYLLQTL 232
D +++ N + Y E+PLE + N + + S S L
Sbjct: 100 RDDSLATVKR-----NQQQY----EMPLEIVSYKDLYNWTMDEIVSCSGVKSSCTYCGVL 150
Query: 233 RQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL- 291
R+ L + A KL + T D+A ++ N+ G A + + TG I
Sbjct: 151 RRQALDRGAMKLGINHVVTGHNADDMAETVLMNLLRGDTARLESSTNITTKSTGSPIKRS 210
Query: 292 RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTV 351
+P + KE++ Y + L + + T A + + A + +L++ PS + +
Sbjct: 211 KPFKYCYQKEIVLYAHYKKLD--YFSTECTYAP--EAFRGTARVLMKNLESVRPSCILDI 266
Query: 352 FRTADKLSL 360
+ + L
Sbjct: 267 IYSGEHFKL 275
>gi|209517341|ref|ZP_03266184.1| PP-loop domain protein [Burkholderia sp. H160]
gi|209502224|gb|EEA02237.1| PP-loop domain protein [Burkholderia sp. H160]
Length = 330
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 33 KEAYENNKLFKRLARQVGEAIGDFNMIEDGDKVMVCLSGGKDSYAMLDIL---MRLRERA 89
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y L+ +N Y+ V
Sbjct: 90 PINFDIVAVNLD---------------QKQPGFPEHVLPEYLKQLDIPFHIENQDTYSIV 134
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 135 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 177
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 178 LQTLLLNLFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYVKETDLEKYAELREF-PI- 230
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D + FP + +F
Sbjct: 231 IPCNLCGSQP--NLKRAEMKALIRDWEKRFPGRIENMF 266
>gi|343485387|dbj|BAJ51041.1| ATPase [Candidatus Caldiarchaeum subterraneum]
Length = 308
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 119/301 (39%), Gaps = 46/301 (15%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI-L 141
C+ C ++ + +G+ K+ RP DK+ VA SG S++LL++L++ KR
Sbjct: 31 CRTCFVKTFEKRVIRTIGRYKLFRPDDKIAVAVSGGKDSLSLLYVLKK-----IEKRFPR 85
Query: 142 FSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAEL 201
+ A+ +D+G Y D +E+ + LY E
Sbjct: 86 AGLVAVTVDEG-------------------IEGYRDEALEYVEEVTRMLEVPLYKTSFE- 125
Query: 202 PLEQFAKD-SEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLAT 260
E F K SEI Q ++ + + LR+ + AAK+ T I TA T D+
Sbjct: 126 --EAFGKSLSEIVASKQFRSSGLAACSVCGPLRRRAINIAAKRAGATVIATAHTLDDVVQ 183
Query: 261 KIIANISLGKGAHVPLDVGFSDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSPVH---V 316
+ +G ++G + G I + P R +EV++Y +++ P
Sbjct: 184 TYF--LKTFRGELGTSEIGLRLE--GPFIPRVAPFRLTPEREVVFYAYLHNI-PFQSQVC 238
Query: 317 PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKA 376
P+ AT S++ F+ + +P ++ R+ +K + + C C
Sbjct: 239 PNAAT------SMRNMIRRFLAEFDERYPGSLFAALRSFEKTT--TLGKKMQRVCSYCGE 290
Query: 377 P 377
P
Sbjct: 291 P 291
>gi|307731306|ref|YP_003908530.1| PP-loop domain-containing protein [Burkholderia sp. CCGE1003]
gi|307585841|gb|ADN59239.1| PP-loop domain protein [Burkholderia sp. CCGE1003]
Length = 324
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 26 KEAYENNKLFKRLARQVGQAIGDFNMIENGDKVMVCLSGGKDSYAMLDIL---MRLRERA 82
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y L+ +N Y+ V
Sbjct: 83 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLKQLDIPFHIENQDTYSIV 127
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 128 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 170
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 171 LQTLLLNLFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYVKETDLEKYAELREF-PI- 223
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D + FP + +F
Sbjct: 224 IPCNLCGSQP--NLKRAEMKALIRDWEKRFPGRIENMF 259
>gi|401837561|gb|EJT41475.1| NCS2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 493
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 153/376 (40%), Gaps = 63/376 (16%)
Query: 64 CPRC--NTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF------ 115
C RC + N V K+ +C C +++++ K R + K + R KVL
Sbjct: 3 CQRCPVSGRNLATVESRKEKFCDECFIKFVSTKQRKQMMKDEFFRNLFKVLYPLEKEGSV 62
Query: 116 -----------SGSHSSMALLH--LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER 162
SGS + + ++H LL++ Q ++H + I+ + VSI +
Sbjct: 63 ARILLPLSLSDSGSLAMLDIVHDLLLEQVKQHNNHTGFTVDILTIFTGET----VSIVKE 118
Query: 163 KANNAQIATAMKY-----FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINK--- 214
+ + +K + +F + + + + + E FAK ++
Sbjct: 119 RMESLVKEKLLKLNKPNIYKVHFIDINEFFSNTSRVSNLIIDDGNFEIFAKSKSVDSGSR 178
Query: 215 ------MFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISL 268
+ + SSR L ++ L+ A + + I + T L+ II+ +
Sbjct: 179 LCLREILGEYCLNNSSRTDLTSIIKTQLIKHFAYENDNDAIIWGHSMTKLSEVIISLVVK 238
Query: 269 GKGAHVP--LDV-GFS--DDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV------- 316
GKG+ + LD F D+R + L P++D S E+ + L+ +
Sbjct: 239 GKGSQIATFLDSESFDTLDNRPCNYKNLYPMKDLLSVEIESFLQIKSLTRFLINFEETNA 298
Query: 317 -PS--LATLADPLASLQKAAES---------FVTDLQTNFPSTVSTVFRTADKLSLDLTS 364
P+ +A + PL QK ++ + D+Q ++ + +STV RTADKL+ +S
Sbjct: 299 KPNCLIAKKSSPLLDQQKLVKNMTINEITTKYFQDIQNDYSNIISTVLRTADKLTEPRSS 358
Query: 365 MNVNNTCLLCKAPLDT 380
M + C +C++ + T
Sbjct: 359 MTKPSQCQICQSKIYT 374
>gi|323527653|ref|YP_004229806.1| PP-loop domain-containing protein [Burkholderia sp. CCGE1001]
gi|323384655|gb|ADX56746.1| PP-loop domain protein [Burkholderia sp. CCGE1001]
Length = 324
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 26 KEAYENNKLFKRLARQVGQAIGDFNMIENGDKVMVCLSGGKDSYAMLDIL---MRLRERA 82
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y L+ +N Y+ V
Sbjct: 83 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLKQLDIPFHIENQDTYSIV 127
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 128 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 170
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 171 LQTLLLNLFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYVKETDLEKYAELREF-PI- 223
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D + FP + +F
Sbjct: 224 IPCNLCGSQP--NLKRAEMKALIRDWEKRFPGRIENMF 259
>gi|124027476|ref|YP_001012796.1| ATPase [Hyperthermus butylicus DSM 5456]
gi|123978170|gb|ABM80451.1| predicted ATPase of the PP-loop superfamily [Hyperthermus butylicus
DSM 5456]
Length = 331
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
+C+ L+Y + K R L + K+ P++K++VA SG SM+LLH L ++LS KR+
Sbjct: 9 FCEKHFLEYFDRKVRRTLRRYKLFGPEEKIVVAVSGGKDSMSLLHYL---LRLS--KRVP 63
Query: 142 -FSVCAIYIDDG 152
+ V A+ +D+G
Sbjct: 64 GWRVAALLVDEG 75
>gi|407715036|ref|YP_006835601.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia
phenoliruptrix BR3459a]
gi|407237220|gb|AFT87419.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia
phenoliruptrix BR3459a]
Length = 324
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 26 KEAYENNKLFKRLARQVGQAIGDFNMIENGDKVMVCLSGGKDSYAMLDIL---MRLRERA 82
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y L+ +N Y+ V
Sbjct: 83 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLKQLDIPFHIENQDTYSIV 127
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 128 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 170
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 171 LQTLLLNLFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYVKETDLEKYAELREF-PI- 223
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D + FP + +F
Sbjct: 224 IPCNLCGSQP--NLKRAEMKALIRDWEKRFPGRIENMF 259
>gi|221271982|sp|A6ZRW4.1|CTU2_YEAS7 RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2; AltName:
Full=Needs CLA4 to survive protein 2; AltName:
Full=Thiolation of uridine in cytoplasmic tRNA protein 2
gi|125863538|gb|ABN58583.1| NCS2 [Saccharomyces cerevisiae]
gi|125863549|gb|ABN58592.1| NCS2 [Saccharomyces cerevisiae]
gi|125863599|gb|ABN58637.1| NCS2 [Saccharomyces cerevisiae]
gi|151944418|gb|EDN62696.1| protein with a role in urmylation and in invasive and pseudohyphal
growth [Saccharomyces cerevisiae YJM789]
Length = 493
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 156/390 (40%), Gaps = 90/390 (23%)
Query: 64 CPRCNTN--NGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF------ 115
C RC+ + N V K+ +C C +++++ K R + K + R KV+ F
Sbjct: 3 CQRCSASARNPATVESRKEKFCDECFIKFVSTKQRKQMMKDEYFRNLFKVIYPFEKEGSV 62
Query: 116 -----------SGSHSSMALLH--LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER 162
SGS + ++H LL++ Q ++ V ++ ++ VS+ +
Sbjct: 63 SKILLPLSLSDSGSLVMLDIVHDLLLEQTKQHNNRTGFTVDVLTVFTEEN----VSVIKE 118
Query: 163 KANN------AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP--------LEQFAK 208
+ + +Q+ F+ +F D + + + +E+ E F+K
Sbjct: 119 RMESLINEKMSQLNKISNIFNVHFI--------DVNEFFNNASEVSTFIIDNENFEIFSK 170
Query: 209 DSEINKMFQTVTTL-----------SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
++ + TL SSR L+ ++ L+ A + I + T
Sbjct: 171 SKSVDD--SNILTLKEILGKYCLNSSSRSDLISIIKTQLIKHFAYENGYNAIMWGHSMTK 228
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIIT--------LRPLRDFSSKEVIYYNIFN 309
L+ II+ + GKG+ + F D + D + L P++D S E+ +
Sbjct: 229 LSEVIISLVVKGKGSQI---ATFLDSESFDTLNNKPCKYKNLYPMKDLLSVEIESFLQIR 285
Query: 310 DLSPVHVPSLATLADP--------LASL--QKAAES---------FVTDLQTNFPSTVST 350
+L+ + T P L SL QK ++ + D+Q ++ + +ST
Sbjct: 286 NLAQFLINVEETNVKPNCLIARKSLPSLGQQKLVKNMTINEITNKYFQDIQNDYSNIIST 345
Query: 351 VFRTADKLSLDLTSMNVNNTCLLCKAPLDT 380
V RTADKL+ +SM + C +C++ + T
Sbjct: 346 VLRTADKLTQPKSSMAKPSQCQICQSKIYT 375
>gi|218883803|ref|YP_002428185.1| putative ATPase of the PP-loop superfamily [Desulfurococcus
kamchatkensis 1221n]
gi|218765419|gb|ACL10818.1| Predicted ATPase of the PP-loop superfamily [Desulfurococcus
kamchatkensis 1221n]
Length = 339
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 118/320 (36%), Gaps = 39/320 (12%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
YC+ ++Y K + + K +M+ + ++VA SG S+ALLH+L + S K
Sbjct: 22 YCRNHFIEYFEKKVKKTIRKYRMLGKNEHIIVAVSGGKDSIALLHVLHK----LSRKMPG 77
Query: 142 FSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAEL 201
+ V A+ +D+G E+ N A D + ++ +
Sbjct: 78 WRVTAVLVDEGI---KGYREKTVENLVAYAAKNKVDYHIVSFKEYIGAS----------- 123
Query: 202 PLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATK 261
L++ + + + R+ +L +AA++L T I TA D+
Sbjct: 124 -LDEIVEKGRARGLPYLPCSYCG------VFRRYVLNKAARRLGGTVIATAHNLDDVIQT 176
Query: 262 IIAN-ISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLA 320
+ N IS L SD+ G I ++P KE Y + N L P
Sbjct: 177 FLMNIISNSVDKIYKLTPVISDEEGGFIKRIKPFYTVLEKESALYALLNGLIE---PEYV 233
Query: 321 TLADPLASLQKAAESFVTDLQTNFPSTV-----STVFRTADKLSLDLTSMNVNNTCLLCK 375
+++ + +L+ P S + T +K + D ++N C +C
Sbjct: 234 QCPYAEYNIRFTIRKLINELEDKHPGVKYGLLNSLISLTQEKQTRD--TVNKKQVCKICG 291
Query: 376 APLD---TRADLASSSMGAT 392
P RA L +G T
Sbjct: 292 EPSSHPVCRACLYRYELGLT 311
>gi|399887637|ref|ZP_10773514.1| PP-loop family protein [Clostridium arbusti SL206]
Length = 288
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 109/275 (39%), Gaps = 43/275 (15%)
Query: 89 QYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIY 148
+YL KF A+ K++ DK+ VA SG S+ + + Q QL H +I F + I
Sbjct: 34 KYLWTKFIRAIKDFKLVEEGDKIAVAVSGGKDSLLMAKMFQ---QLKYHPQINFELEFIA 90
Query: 149 IDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAK 208
+D G K+N + +Y + +P+ F
Sbjct: 91 MDPGF--------HKSNKDLLLNNCEYLN-----------------------IPVHLFE- 118
Query: 209 DSEINKMFQTVTTLSSRQ--YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
+ +F+ V ++ Y+ +R+ L AK+L C K+ D+ + N+
Sbjct: 119 ----SGIFEVVENIAKEYPCYMCARMRRGALYTKAKELGCNKLALGHHFNDVIETTMLNV 174
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
L G + + +RPL ++ + N LS ++ + A
Sbjct: 175 -LYSGNFKTMKPKLKSKNFEGLELIRPLYYVEENDIKKFVRNNGLSTMNCGCIVA-AQKT 232
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLD 361
+S +K + +++L+ NF ++F++A ++LD
Sbjct: 233 SSKRKEIKDLISELKKNFNDVDKSIFQSAQNVNLD 267
>gi|392595052|gb|EIW84376.1| hypothetical protein CONPUDRAFT_163521 [Coniophora puteana
RWD-64-598 SS2]
Length = 549
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 291 LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVST 350
+RPLRD + KE Y +N + + LA + + L K F+ L+ ++PSTVS
Sbjct: 326 VRPLRDVTMKECAMYAWWNSVEILGHLRLARVGQSIYGLTK---DFIMGLEKDYPSTVSA 382
Query: 351 VFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLS 407
+FRT K+ S+ + C++C+ P+ G ++ +S TRE L+
Sbjct: 383 IFRTLAKVEPKDQSV---DWCVMCQRPM---------PHGIQQWKSQISIRTREMLA 427
>gi|390938516|ref|YP_006402254.1| PP-loop domain-containing protein [Desulfurococcus fermentans DSM
16532]
gi|390191623|gb|AFL66679.1| PP-loop domain protein [Desulfurococcus fermentans DSM 16532]
Length = 321
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC G V K +C+ ++Y + A+ K +M++P D+V+VA SG SM+
Sbjct: 4 CRRCGREGGYRVSYAKAWFCREHFIEYFEERVVEAIRKHRMIKPGDRVVVAVSGGKDSMS 63
Query: 124 LLHLL 128
LL +L
Sbjct: 64 LLTVL 68
>gi|348516178|ref|XP_003445616.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like
[Oreochromis niloticus]
Length = 343
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 108/297 (36%), Gaps = 39/297 (13%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK C + + +K+ +P + V +A SG S L H+++ L+
Sbjct: 25 CKECFFWTFEEEIHQTIVSAKLFKPGESVGIAASGGKDSTVLAHVMK---VLNERYNYGL 81
Query: 143 SVCAIYIDDG--SISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAE 200
+ + +D+G S+ K N Q +K Y ++
Sbjct: 82 ELMLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVS-----------------YEELYG 124
Query: 201 LPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLAT 260
++ K L + R+ L + A L KI T D+A
Sbjct: 125 WTMDAIVKQ----------VGLKNNCTFCGVFRRQALDRGAIMLKVGKICTGHNADDVAE 174
Query: 261 KIIANISLGKGAHVPLDVGFSDD--RTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPS 318
++ N+ G A + S D G + +PL+ KE++ Y F L S
Sbjct: 175 TVLMNVLRGDIARLRRCTAISTDSENEGVVPRCKPLKYAYEKEIVLYAYFKKLDYF---S 231
Query: 319 LATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL-DLTSMNVNNTCLLC 374
+ P A + A +++ DL++ PS++ V + + LS+ + M V TC C
Sbjct: 232 TECIYSPNA-YRGYARTYLKDLESVRPSSIMDVIHSGENLSVREGVKMPVQGTCSRC 287
>gi|51830500|gb|AAU09777.1| YNL119W [Saccharomyces cerevisiae]
Length = 493
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 155/390 (39%), Gaps = 90/390 (23%)
Query: 64 CPRC--NTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF------ 115
C RC + N V K+ +C C +++++ K R + K + R KV+ F
Sbjct: 3 CQRCPASARNPATVESRKEKFCDECFIKFVSTKRRKQMMKDEYFRNLFKVIYPFEKEGSV 62
Query: 116 -----------SGSHSSMALLH--LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER 162
SGS + ++H LL++ Q ++ V ++ ++ VS+ +
Sbjct: 63 SKILLPLSHSDSGSLVMLDIVHDLLLEQTKQHNNRTGFTVDVLTVFTEEN----VSVIKE 118
Query: 163 KANN------AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP--------LEQFAK 208
+ + +Q+ F+ +F D + + + +E+ E F+K
Sbjct: 119 RMESLINEKMSQLNKISNIFNVHFI--------DVNEFFNNASEVSTFIIDNENFEIFSK 170
Query: 209 DSEINKMFQTVTTL-----------SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
++ + TL SSR L+ ++ L+ A + I + T
Sbjct: 171 SKSVDD--SNILTLKEILGKYCLNNSSRSDLISIIKTQLIKHFAYENGYNAIMWGHSMTK 228
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIIT--------LRPLRDFSSKEVIYYNIFN 309
L+ II+ + GKG+ + F D + D + L P++D S E+ +
Sbjct: 229 LSEVIISLVVKGKGSQI---ATFLDSESFDTLNNKPCKYKNLYPMKDLLSVEIESFLQIR 285
Query: 310 DLSPVHVPSLATLADP--------LASL--QKAAES---------FVTDLQTNFPSTVST 350
+L+ + T P L SL QK ++ + D+Q ++ + +ST
Sbjct: 286 NLAQFLINVEETNVKPNCLIARKSLPSLGQQKLVKNMTINEITNKYFQDIQNDYSNIIST 345
Query: 351 VFRTADKLSLDLTSMNVNNTCLLCKAPLDT 380
V RTADKL+ +SM + C +C++ + T
Sbjct: 346 VLRTADKLTQPKSSMAKPSQCQICQSKIYT 375
>gi|125863496|gb|ABN58547.1| NCS2 [Saccharomyces cerevisiae]
gi|125863569|gb|ABN58610.1| NCS2 [Saccharomyces cerevisiae]
gi|125863579|gb|ABN58619.1| NCS2 [Saccharomyces cerevisiae]
gi|349580820|dbj|GAA25979.1| K7_Ncs2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 493
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 155/390 (39%), Gaps = 90/390 (23%)
Query: 64 CPRC--NTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF------ 115
C RC + N V K+ +C C +++++ K R + K + R KV+ F
Sbjct: 3 CQRCPASARNPATVESRKEKFCDECFIKFVSTKQRKQMMKDEYFRNLFKVIYPFEKEGSV 62
Query: 116 -----------SGSHSSMALLH--LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER 162
SGS + ++H LL++ Q ++ V ++ ++ VS+ +
Sbjct: 63 SKILLPLSLSDSGSLVMLDIVHDLLLEQTKQHNNRTGFTVDVLTVFTEEN----VSVIKE 118
Query: 163 KANN------AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP--------LEQFAK 208
+ + +Q+ F+ +F D + + + +E+ E F+K
Sbjct: 119 RMESLINEKMSQLNKISNIFNVHFI--------DVNEFFNNASEVSTFIIDNENFEIFSK 170
Query: 209 DSEINKMFQTVTTL-----------SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
++ + TL SSR L+ ++ L+ A + I + T
Sbjct: 171 SKSVDD--SNILTLKEILGKYCLNSSSRSDLISIIKTQLIKHFAYENGYNAIMWGHSMTK 228
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIIT--------LRPLRDFSSKEVIYYNIFN 309
L+ II+ + GKG+ + F D + D + L P++D S E+ +
Sbjct: 229 LSEVIISLVVKGKGSQI---ATFLDSESFDTLNNKPCKYKNLYPMKDLLSVEIESFLQIR 285
Query: 310 DLSPVHVPSLATLADP--------LASL--QKAAES---------FVTDLQTNFPSTVST 350
+L+ + T P L SL QK ++ + D+Q ++ + +ST
Sbjct: 286 NLAQFLINVEETNVKPNCLIARKSLPSLGQQKLVKNMTINEITNKYFQDIQNDYSNIIST 345
Query: 351 VFRTADKLSLDLTSMNVNNTCLLCKAPLDT 380
V RTADKL+ +SM + C +C++ + T
Sbjct: 346 VLRTADKLTQPKSSMAKPSQCQICQSKIYT 375
>gi|125863589|gb|ABN58628.1| NCS2 [Saccharomyces cerevisiae]
Length = 493
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 155/390 (39%), Gaps = 90/390 (23%)
Query: 64 CPRC--NTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF------ 115
C RC + N V K+ +C C +++++ K R + K + R KV+ F
Sbjct: 3 CQRCPASARNPATVESRKEKFCDECFIKFVSTKQRKQMMKDEYFRNLFKVIYPFEKEGSV 62
Query: 116 -----------SGSHSSMALLH--LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER 162
SGS + ++H LL++ Q ++ V ++ ++ VS+ +
Sbjct: 63 SKILLPLSLSDSGSLVMLDIVHDLLLEQTKQHNNRTGFTVDVLTVFTEEN----VSVIKE 118
Query: 163 KANN------AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP--------LEQFAK 208
+ + +Q+ F+ +F D + + + +E+ E F+K
Sbjct: 119 RMESLINEKMSQLNKISNIFNVHFI--------DVNEFFNNASEVSTFIIDNENFEIFSK 170
Query: 209 DSEINKMFQTVTTL-----------SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
++ + TL SSR L+ ++ L+ A + I + T
Sbjct: 171 SKSVDD--SNILTLKEILGKYCLNNSSRSDLISIIKTQLIKHFAYENGYNAIMWGHSMTK 228
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIIT--------LRPLRDFSSKEVIYYNIFN 309
L+ II+ + GKG+ + F D + D + L P++D S E+ +
Sbjct: 229 LSEVIISLVVKGKGSQI---ATFLDSESFDTLNNKPCKYKNLYPMKDLLSVEIESFLQIR 285
Query: 310 DLSPVHVPSLATLADP--------LASL--QKAAES---------FVTDLQTNFPSTVST 350
+L+ + T P L SL QK ++ + D+Q ++ + +ST
Sbjct: 286 NLAQFLINVEETNVKPNCLIARKSLPSLGQQKLVKNMTINEITNKYFQDIQNDYSNIIST 345
Query: 351 VFRTADKLSLDLTSMNVNNTCLLCKAPLDT 380
V RTADKL+ +SM + C +C++ + T
Sbjct: 346 VLRTADKLTQPKSSMAKPSQCQICQSKIYT 375
>gi|50312235|ref|XP_456149.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74604879|sp|Q6CIU0.1|CTU2_KLULA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|49645285|emb|CAG98857.1| KLLA0F24002p [Kluyveromyces lactis]
Length = 463
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 168/423 (39%), Gaps = 81/423 (19%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKS-------KMMRPQDK----- 110
+C RC + +V R K+ +C C +++++ K R + K+ P K
Sbjct: 3 ICKRCKLLDATLVSR-KEPFCDECFVKFISLKQRKQMMSDDYFQDIFKISYPDKKRGQAE 61
Query: 111 ---------VLVAFSGSHSSMALLHLLQEGM--QLSSHK-RILFSVCAIYIDD------- 151
VLV S SS+A+L +L + + Q +H+ + F V I I
Sbjct: 62 ADKQNQDSNVLVPLSLGSSSLAVLDILNDTLLEQKQTHRGKTGFHVEVITICGQAEFEEV 121
Query: 152 -GSISQVSISERKANNAQIATAM----KYFDSYFTCLEQALEPDNMKLYTDVAELPLEQF 206
G I + S+ K N+ +I + ++F F E L DN + P
Sbjct: 122 RGKIELLK-SKYKENSDKILFHIVDRNQFFAVPFDLQEITLYIDNFNTLVRSSNNP---- 176
Query: 207 AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
+ + K+ + ++++ LL + +L+ + A + N I + T LA ++I+
Sbjct: 177 --STTVEKVLASAPNKTAKEDLLNIIYTHLIKKFALQRNFKAILWGHSMTKLADEVISLT 234
Query: 267 SLGKGAHVPLDVGFSDDRTGD------IITLRPLRD-----------------FSSKEVI 303
G+GA + G+ DD + D P RD FS V+
Sbjct: 235 VKGRGAEI---AGYLDDSSLDSKYNTAFRNFHPGRDVLLSEIDAYCHIKGLSQFSHNYVV 291
Query: 304 ----YYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
+Y+ F D +V + + ++ + A + +++ ++ + +STV RT KLS
Sbjct: 292 QDTLFYDKFVDKPTKNVKLIKNM-----TMNELARQYFDNIEGDYSNVISTVVRTGAKLS 346
Query: 360 LDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHA 419
+N C +C A + + + G T +V + E ++ + +PD A
Sbjct: 347 NPDNELNQIMHCSICNAII--YKNPVNWLDGITVSKPFVIHNEEELTNYNAWEAANPDKA 404
Query: 420 SKV 422
K+
Sbjct: 405 EKL 407
>gi|398364777|ref|NP_014280.3| Ncs2p [Saccharomyces cerevisiae S288c]
gi|1730768|sp|P53923.1|CTU2_YEAST RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2; AltName:
Full=Needs CLA4 to survive protein 2; AltName:
Full=Thiolation of uridine in cytoplasmic tRNA protein 2
gi|1183954|emb|CAA93388.1| N1913 [Saccharomyces cerevisiae]
gi|1302048|emb|CAA96001.1| unnamed protein product [Saccharomyces cerevisiae]
gi|125863486|gb|ABN58538.1| NCS2 [Saccharomyces cerevisiae]
gi|125863506|gb|ABN58556.1| NCS2 [Saccharomyces cerevisiae]
gi|285814535|tpg|DAA10429.1| TPA: Ncs2p [Saccharomyces cerevisiae S288c]
gi|392296873|gb|EIW07974.1| Ncs2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 493
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 155/390 (39%), Gaps = 90/390 (23%)
Query: 64 CPRC--NTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF------ 115
C RC + N V K+ +C C +++++ K R + K + R KV+ F
Sbjct: 3 CQRCPASARNPATVESRKEKFCDECFIKFVSTKQRKQMMKDEYFRNLFKVIYPFEKEGSV 62
Query: 116 -----------SGSHSSMALLH--LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER 162
SGS + ++H LL++ Q ++ V ++ ++ VS+ +
Sbjct: 63 SKILLPLSHSDSGSLVMLDIVHDLLLEQTKQHNNRTGFTVDVLTVFTEEN----VSVIKE 118
Query: 163 KANN------AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP--------LEQFAK 208
+ + +Q+ F+ +F D + + + +E+ E F+K
Sbjct: 119 RMESLINEKMSQLNKISNIFNVHFI--------DVNEFFNNASEVSTFIIDNENFEIFSK 170
Query: 209 DSEINKMFQTVTTL-----------SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
++ + TL SSR L+ ++ L+ A + I + T
Sbjct: 171 SKSVDD--SNILTLKEILGKYCLNNSSRSDLISIIKTQLIKHFAYENGYNAIMWGHSMTK 228
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIIT--------LRPLRDFSSKEVIYYNIFN 309
L+ II+ + GKG+ + F D + D + L P++D S E+ +
Sbjct: 229 LSEVIISLVVKGKGSQI---ATFLDSESFDTLNNKPCKYKNLYPMKDLLSVEIESFLQIR 285
Query: 310 DLSPVHVPSLATLADP--------LASL--QKAAES---------FVTDLQTNFPSTVST 350
+L+ + T P L SL QK ++ + D+Q ++ + +ST
Sbjct: 286 NLAQFLINVEETNVKPNCLIARKSLPSLGQQKLVKNMTINEITNKYFQDIQNDYSNIIST 345
Query: 351 VFRTADKLSLDLTSMNVNNTCLLCKAPLDT 380
V RTADKL+ +SM + C +C++ + T
Sbjct: 346 VLRTADKLTQPKSSMAKPSQCQICQSKIYT 375
>gi|390574918|ref|ZP_10255028.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia terrae
BS001]
gi|389933159|gb|EIM95177.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia terrae
BS001]
Length = 334
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 36 KEAYENNKLFKRLARQVGQAIGDFNMIEDGDKVMVCLSGGKDSYAMLEIL---MRLRERA 92
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y + L+ +N Y+ V
Sbjct: 93 PINFDIVAVNLD---------------QKQPGFPEHVLPEYLSKLDIPFHIENQDTYSIV 137
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 138 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 180
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y P+
Sbjct: 181 LQTLLLNLFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKYAELRQF-PI- 233
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P TL +L++A ++ + + FP V +F
Sbjct: 234 IP--CTLCGSQPNLKRAEMKALIREWDKRFPGRVDNMF 269
>gi|221271981|sp|B3LNX6.1|CTU2_YEAS1 RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2; AltName:
Full=Needs CLA4 to survive protein 2; AltName:
Full=Thiolation of uridine in cytoplasmic tRNA protein 2
gi|125863516|gb|ABN58565.1| NCS2 [Saccharomyces cerevisiae]
gi|125863526|gb|ABN58574.1| NCS2 [Saccharomyces cerevisiae]
gi|125863559|gb|ABN58601.1| NCS2 [Saccharomyces cerevisiae]
gi|125863609|gb|ABN58646.1| NCS2 [Saccharomyces cerevisiae]
gi|190409106|gb|EDV12371.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|259149243|emb|CAY82485.1| Ncs2p [Saccharomyces cerevisiae EC1118]
gi|365763570|gb|EHN05098.1| Ncs2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 493
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 155/390 (39%), Gaps = 90/390 (23%)
Query: 64 CPRC--NTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF------ 115
C RC + N V K+ +C C +++++ K R + K + R KV+ F
Sbjct: 3 CQRCPASARNPATVESRKEKFCDECFIKFVSTKQRKQMMKDEYFRNLFKVIYPFEKEGSV 62
Query: 116 -----------SGSHSSMALLH--LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER 162
SGS + ++H LL++ Q ++ V ++ ++ VS+ +
Sbjct: 63 SKILLPLSLSDSGSLVMLDIVHDLLLEQTKQHNNRTGFTVDVLTVFTEEN----VSVIKE 118
Query: 163 KANN------AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP--------LEQFAK 208
+ + +Q+ F+ +F D + + + +E+ E F+K
Sbjct: 119 RMESLINEKMSQLNKISNIFNVHFI--------DVNEFFNNASEVSTFIIDNENFEIFSK 170
Query: 209 DSEINKMFQTVTTL-----------SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
++ + TL SSR L+ ++ L+ A + I + T
Sbjct: 171 SKSVDD--SNILTLKEILGKYCLNNSSRSDLISIIKTQLIKHFAYENGYNAIMWGHSMTK 228
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIIT--------LRPLRDFSSKEVIYYNIFN 309
L+ II+ + GKG+ + F D + D + L P++D S E+ +
Sbjct: 229 LSEVIISLVVKGKGSQI---ATFLDSESFDTLNNKPCKYKNLYPMKDLLSVEIESFLQIR 285
Query: 310 DLSPVHVPSLATLADP--------LASL--QKAAES---------FVTDLQTNFPSTVST 350
+L+ + T P L SL QK ++ + D+Q ++ + +ST
Sbjct: 286 NLAQFLINVEETNVKPNCLIARKSLPSLGQQKLVKNMTINEITNKYFQDIQNDYSNIIST 345
Query: 351 VFRTADKLSLDLTSMNVNNTCLLCKAPLDT 380
V RTADKL+ +SM + C +C++ + T
Sbjct: 346 VLRTADKLTQPKSSMAKPSQCQICQSKIYT 375
>gi|255526695|ref|ZP_05393599.1| PP-loop domain protein [Clostridium carboxidivorans P7]
gi|296185613|ref|ZP_06854022.1| PP-loop family protein [Clostridium carboxidivorans P7]
gi|255509627|gb|EET85963.1| PP-loop domain protein [Clostridium carboxidivorans P7]
gi|296049741|gb|EFG89166.1| PP-loop family protein [Clostridium carboxidivorans P7]
Length = 289
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 108/273 (39%), Gaps = 49/273 (17%)
Query: 94 KFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 153
KF A+ K++ DK+ VA SG SM + L QE L H+++ F + I +D G
Sbjct: 39 KFVKAIKNYKLVEEGDKIAVAISGGKDSMLMAKLFQE---LHRHRQMNFQLEFIAMDPG- 94
Query: 154 ISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAE---LPLEQFAKDS 210
D KL D E +P++ F
Sbjct: 95 ---------------------------------YHKDIKKLLIDNCEYLNIPVQIFE--- 118
Query: 211 EINKMFQTVTTLSSRQ--YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISL 268
+ +F+ ++ + Y+ +R+ L AK+L C K+ D+ + N+
Sbjct: 119 --SGIFEVADKIAQKYPCYMCARMRRGALYTKAKELGCNKLALGHHFNDVIETTLLNVLY 176
Query: 269 GKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLAS 328
L S + G I +RPL + + + + + P++ + + A + +
Sbjct: 177 SGNFKTMLPKLKSTNFEG-IELIRPLYYIEEENIQRFIQKSGIWPLNCACMVS-AGKIGN 234
Query: 329 LQKAAESFVTDLQTNFPSTVSTVFRTADKLSLD 361
+ + + +L+ NFP ++F++A+ +++D
Sbjct: 235 KRYEIKDLIKELKKNFPQVDKSIFKSAENVNMD 267
>gi|420256048|ref|ZP_14758912.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderia sp. BT03]
gi|398043947|gb|EJL36808.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderia sp. BT03]
Length = 334
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 36 KEAYENNKLFKRLARQVGQAIGDFNMIEDGDKVMVCLSGGKDSYAMLEIL---MRLRERA 92
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y + L+ +N Y+ V
Sbjct: 93 PINFDIVAVNLD---------------QKQPGFPEHVLPEYLSKLDIPFHIENQDTYSIV 137
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 138 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 180
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y P+
Sbjct: 181 LQTLLLNLFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKYAELRQF-PI- 233
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P TL +L++A ++ + + FP V +F
Sbjct: 234 IP--CTLCGSQPNLKRAEMKALIREWDKRFPGRVDNMF 269
>gi|145591717|ref|YP_001153719.1| PP-loop domain-containing protein [Pyrobaculum arsenaticum DSM
13514]
gi|145283485|gb|ABP51067.1| PP-loop domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 332
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 117/309 (37%), Gaps = 46/309 (14%)
Query: 63 LCPRCNTNNGEVVLRLK-DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
LC RC + + + C CL Q + K + + +++ P D V VA SG S
Sbjct: 7 LCTRCGRRPAQYFRAVSGERLCLRCLFQSVERKVLETIRRERLIVPGDYVAVAVSGGKDS 66
Query: 122 MALLHLL---QEGMQLSSHKRILFSVCAIYIDDG-------SISQVSISERKANNAQIAT 171
+ LLH+L +E L K F+V ++G +S+ A I
Sbjct: 67 LVLLHILGSFKERGLLRDVKMEAFTV-----NEGHPYSCFYRMSRRDYVRELAARFGIEY 121
Query: 172 AMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQT 231
+ +F +F Q L E+ AK M T+
Sbjct: 122 NVYHFKDFFGVTAQELS---------------ERLAKAGHEVHM----CTIDG------V 156
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDII-T 290
LR+ L+ ++ TKI TA D A ++ N+ +G + + D D+I
Sbjct: 157 LRRRLMNVVGRRRGWTKIATAHNLDDEAQTVLMNVLMGNLSRFAYYGVYEDAEEKDLIPR 216
Query: 291 LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVST 350
++P++ +EV Y ++ + + + +A+P L+ + + + PS
Sbjct: 217 IKPMKYIREEEVALYAYYHGIPLMELECPYVVANPRYDLKFT----LAEWEREMPSVKYN 272
Query: 351 VFRTADKLS 359
+ +KL+
Sbjct: 273 LVSFGEKLA 281
>gi|225023480|ref|ZP_03712672.1| hypothetical protein EIKCOROL_00338 [Eikenella corrodens ATCC
23834]
gi|224943720|gb|EEG24929.1| hypothetical protein EIKCOROL_00338 [Eikenella corrodens ATCC
23834]
Length = 317
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 106/267 (39%), Gaps = 46/267 (17%)
Query: 91 LNHKFRAALGKS----KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCA 146
L+ + R A+G++ M+ DK++V SG S ALL +L+ L + I F + A
Sbjct: 14 LHKRLRHAVGQAINDFNMIEEGDKIMVCLSGGKDSYALLDILR---HLQASAPINFELVA 70
Query: 147 IYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQF 206
+ +D Q Y T + + Y+ V + E
Sbjct: 71 VNLD---------------QKQPGFPEHVLPEYLTSIGVPFKIVEEDTYSTVKRVLDEG- 114
Query: 207 AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD-LATKIIAN 265
+T +L SR LR+ +L + AK+L CTKI + D LAT +
Sbjct: 115 ----------KTTCSLCSR------LRRGILYRTAKELGCTKIALGHHRDDILATLFLNM 158
Query: 266 ISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADP 325
GK +P + SD+ G+ I +RPL K++I Y P+ +P + P
Sbjct: 159 FYGGKLKAMPPKL-VSDN--GEHIVIRPLAYVKEKDLIKYAEIKQF-PI-IPCNLCGSQP 213
Query: 326 LASLQKAAESFVTDLQTNFPSTVSTVF 352
Q E + D FP + ++F
Sbjct: 214 NLQRQVVGE-MLKDWDKRFPGRIESMF 239
>gi|312792431|ref|YP_004025354.1| PP-loop domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179571|gb|ADQ39741.1| PP-loop domain protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 303
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + R +C+ C L Y ++ + + + +M +DKVLV SG SMA
Sbjct: 3 CVRCRKKGVIHLKRHNAAFCQECFLYYYKNQVKKNIKRHRMFDKEDKVLVVISGGKDSMA 62
Query: 124 LLHLL-QEGMQLSSHKRILFSVCAIYIDDGSISQVS 158
L H+L EG ++V +YI+ G I Q S
Sbjct: 63 LWHILASEG----------YNVTGMYINLG-IGQYS 87
>gi|413964212|ref|ZP_11403439.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia sp.
SJ98]
gi|413930044|gb|EKS69332.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia sp.
SJ98]
Length = 323
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 30 KEAYENNKLFKRIARQVGEAIGDFNMIEEGDKVMVCLSGGKDSYAMLDIL---MRLRERA 86
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y + L+ +N Y+ V
Sbjct: 87 PINFEIVAVNLD---------------QKQPGFPEHVLPEYLSKLDIPFHIENQDTYSIV 131
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 132 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 174
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 175 LQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYVKEVDLEKYAELREF-PI- 227
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ V + FP V +F
Sbjct: 228 IPCNLCGSQP--NLKRAEMKALVREWDKRFPGRVENMF 263
>gi|365758717|gb|EHN00545.1| Ncs2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 493
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 150/376 (39%), Gaps = 63/376 (16%)
Query: 64 CPRC--NTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF------ 115
C RC + N V K+ +C C +++++ K R + K + R KVL
Sbjct: 3 CQRCPVSGRNLATVESRKEKFCDECFIKFVSTKQRKQMMKDEFFRNLFKVLYPLEKEGSV 62
Query: 116 -----------SGSHSSMALLH--LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER 162
SGS + + ++H LL++ Q ++H + I+ + VSI +
Sbjct: 63 ARILLPLSLSDSGSLAMLDIVHDLLLEQVKQHNNHTGFTVDILTIFTGET----VSIVKE 118
Query: 163 KANNAQIATAMKY-----FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINK--- 214
+ + +K + +F + + + + + E FAK ++
Sbjct: 119 RMESLVKEKLLKLNKPNIYKVHFIDINEFFSNTSRVSNLIIDDGNFEIFAKSKSVDSGSR 178
Query: 215 ------MFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISL 268
+ + SSR L ++ L+ A + + I + T L+ II+ +
Sbjct: 179 LCLREILGEYCLNNSSRTDLTSIIKTQLIKHFAYENDNDAIIWGHSMTKLSEVIISLVVK 238
Query: 269 GKGAHVP--LDV-GFS--DDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA 323
GKG+ + LD F D+R + L P++D S E+ + L+ + T A
Sbjct: 239 GKGSQIATFLDSESFDTLDNRPCNYKNLYPMKDLLSVEIESFLQIKSLTRFLIKFEETNA 298
Query: 324 ----------DPLASLQKAAES---------FVTDLQTNFPSTVSTVFRTADKLSLDLTS 364
PL QK ++ + D+Q ++ + +STV RTADKL+ +S
Sbjct: 299 KPNCLIVKKSSPLLDQQKLVKNMTINEITTKYFQDIQNDYSNIISTVLRTADKLTEPRSS 358
Query: 365 MNVNNTCLLCKAPLDT 380
M + C +C++ + T
Sbjct: 359 MTKPSQCQICQSKIYT 374
>gi|237810522|ref|YP_002894973.1| PP-loop family protein [Burkholderia pseudomallei MSHR346]
gi|237504914|gb|ACQ97232.1| PP-loop family protein [Burkholderia pseudomallei MSHR346]
Length = 331
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S ALL +L ++L
Sbjct: 36 KEAYENNKLFKRLVRQVGQAIGDYNMIEHGDKVMVCLSGGKDSYALLDIL---LRLRERA 92
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 93 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTKIGVPFHIENQDTYSIV 137
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 138 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 180
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 181 VQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYAKETDLEKYAELREF-PI- 233
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D FP V +F
Sbjct: 234 IPCNLCGSQP--NLKRAEMKALIRDWDKRFPGRVDNMF 269
>gi|134283598|ref|ZP_01770297.1| PP-loop family protein [Burkholderia pseudomallei 305]
gi|134245007|gb|EBA45102.1| PP-loop family protein [Burkholderia pseudomallei 305]
Length = 331
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S ALL +L ++L
Sbjct: 36 KEAYENNKLFKRLVRQVGQAIGDYNMIEHGDKVMVCLSGGKDSYALLDIL---LRLRERA 92
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 93 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTKIGVPFHIENQDTYSIV 137
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 138 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 180
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 181 VQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYAKETDLEKYAELREF-PI- 233
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D FP V +F
Sbjct: 234 IPCNLCGSQP--NLKRAEMKALIRDWDKRFPGRVDNMF 269
>gi|366995449|ref|XP_003677488.1| hypothetical protein NCAS_0G02490 [Naumovozyma castellii CBS 4309]
gi|342303357|emb|CCC71136.1| hypothetical protein NCAS_0G02490 [Naumovozyma castellii CBS 4309]
Length = 484
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 145/354 (40%), Gaps = 59/354 (16%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRP------QDKV-- 111
A +LC RC + V R K+ +C C +++ K R + S R +DKV
Sbjct: 6 AQELCQRCKKDEVTVNSR-KEKFCSKCFQKFITLKQRKQMMSSDYYRDIFKMLYKDKVRT 64
Query: 112 -------------LVAFSGSHSSMALLHLLQEGMQLSSHK---RILFSVCAI--YIDDGS 153
LV S SS+ LL +L + + SH+ + FSV + Y +
Sbjct: 65 AQEAEQQNLDSRILVPLSFGSSSLVLLDILNDTLTEQSHQHKGKTGFSVDVLTCYRHEED 124
Query: 154 ISQV-----SISER-KANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFA 207
+ Q+ S+ ER + N +I + DS+F L+ + Y + + + +
Sbjct: 125 LVQIKENINSLRERYQVNKGKINFHVLSLDSFFNSCGNELQQIVLH-YQEFSSMGADVTN 183
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
D+ I+++ + +S LL + ++++ + + I + T LA +II+ +
Sbjct: 184 FDT-IDQLLKKCPNRNSSGDLLYFITRHVVKKYTLQHGYKAILWGHSMTRLADEIISLVV 242
Query: 268 LGKGAHVP--LDVGFSDDRTGD-IITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLAD 324
G+GA V LD+ D G+ PL+D EV Y L + + A D
Sbjct: 243 KGRGAQVATSLDMHSFDSVYGNKFKNSYPLKDILLDEVDAYLYIAGLDQLVIGYDAR--D 300
Query: 325 PL-------------------ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
L ++ + A + D++ ++ + +STV RT DKL+
Sbjct: 301 SLLINKVKQDNSHKNIRLVRNMTINELARKYFNDIEGDYSNIISTVLRTGDKLA 354
>gi|217076557|ref|YP_002334273.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Thermosipho
africanus TCF52B]
gi|226695550|sp|B7IFR8.1|TILS_THEAB RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
Full=tRNA(Ile)-lysidine synthetase
gi|217036410|gb|ACJ74932.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
(tRNA(Ile)-2-lysyl-cytidine synthase) [Thermosipho
africanus TCF52B]
Length = 427
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 84/216 (38%), Gaps = 50/216 (23%)
Query: 91 LNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
L KF + + ++ D++LVA SG S LL+LL + FS+ +D
Sbjct: 4 LLEKFIQKIEEYNLIEENDRILVAVSGGVDSSVLLNLLARVQEYFK-----FSIFCATVD 58
Query: 151 DG----SISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQF 206
G S +V A + + +K FD + LY +L +E+
Sbjct: 59 HGIRKESKEEVKFVYNMAQSLNVECFIKEFD--------------VPLYAKENKLSIEEA 104
Query: 207 AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
A+ LR L + AKK+N K+ TA DLA ++ +
Sbjct: 105 AR----------------------KLRYKFLNEIAKKINANKVATAHNLNDLAETVLFRL 142
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEV 302
+ G G P + R G+II RPL F KE+
Sbjct: 143 ARGTG---PFGIYGMKPRNGNII--RPLLFFERKEI 173
>gi|53717955|ref|YP_106941.1| C32 tRNA thiolase [Burkholderia pseudomallei K96243]
gi|53724604|ref|YP_104839.1| C32 tRNA thiolase [Burkholderia mallei ATCC 23344]
gi|67639064|ref|ZP_00437981.1| PP-loop family protein [Burkholderia mallei GB8 horse 4]
gi|76811437|ref|YP_331933.1| C32 tRNA thiolase [Burkholderia pseudomallei 1710b]
gi|121598530|ref|YP_994348.1| C32 tRNA thiolase [Burkholderia mallei SAVP1]
gi|124386645|ref|YP_001028003.1| C32 tRNA thiolase [Burkholderia mallei NCTC 10229]
gi|126441802|ref|YP_001057380.1| C32 tRNA thiolase [Burkholderia pseudomallei 668]
gi|126451258|ref|YP_001081774.1| C32 tRNA thiolase [Burkholderia mallei NCTC 10247]
gi|126452389|ref|YP_001064623.1| C32 tRNA thiolase [Burkholderia pseudomallei 1106a]
gi|167004603|ref|ZP_02270361.1| PP-loop family protein [Burkholderia mallei PRL-20]
gi|167717727|ref|ZP_02400963.1| PP-loop family protein [Burkholderia pseudomallei DM98]
gi|167736759|ref|ZP_02409533.1| PP-loop family protein [Burkholderia pseudomallei 14]
gi|167813861|ref|ZP_02445541.1| PP-loop family protein [Burkholderia pseudomallei 91]
gi|167822379|ref|ZP_02453850.1| PP-loop family protein [Burkholderia pseudomallei 9]
gi|167843967|ref|ZP_02469475.1| PP-loop family protein [Burkholderia pseudomallei B7210]
gi|167892470|ref|ZP_02479872.1| PP-loop family protein [Burkholderia pseudomallei 7894]
gi|167900969|ref|ZP_02488174.1| PP-loop family protein [Burkholderia pseudomallei NCTC 13177]
gi|167909185|ref|ZP_02496276.1| PP-loop family protein [Burkholderia pseudomallei 112]
gi|167917219|ref|ZP_02504310.1| PP-loop family protein [Burkholderia pseudomallei BCC215]
gi|217424979|ref|ZP_03456475.1| PP-loop family protein [Burkholderia pseudomallei 576]
gi|226199781|ref|ZP_03795332.1| PP-loop family protein [Burkholderia pseudomallei Pakistan 9]
gi|242314458|ref|ZP_04813474.1| PP-loop family protein [Burkholderia pseudomallei 1106b]
gi|254176826|ref|ZP_04883483.1| PP-loop family protein [Burkholderia mallei ATCC 10399]
gi|254196263|ref|ZP_04902687.1| PP-loop family protein [Burkholderia pseudomallei S13]
gi|254201947|ref|ZP_04908311.1| PP-loop family protein [Burkholderia mallei FMH]
gi|254259203|ref|ZP_04950257.1| PP-loop family protein [Burkholderia pseudomallei 1710a]
gi|254359781|ref|ZP_04976052.1| PP-loop family protein [Burkholderia mallei 2002721280]
gi|386863226|ref|YP_006276175.1| C32 tRNA thiolase [Burkholderia pseudomallei 1026b]
gi|403516989|ref|YP_006651122.1| PP-loop family protein [Burkholderia pseudomallei BPC006]
gi|418382915|ref|ZP_12966835.1| C32 tRNA thiolase [Burkholderia pseudomallei 354a]
gi|418539345|ref|ZP_13104941.1| C32 tRNA thiolase [Burkholderia pseudomallei 1026a]
gi|418545401|ref|ZP_13110657.1| C32 tRNA thiolase [Burkholderia pseudomallei 1258a]
gi|418548457|ref|ZP_13113568.1| C32 tRNA thiolase [Burkholderia pseudomallei 1258b]
gi|418558279|ref|ZP_13122845.1| C32 tRNA thiolase [Burkholderia pseudomallei 354e]
gi|81380602|sp|Q63Y74.1|TTCA_BURPS RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|81603697|sp|Q62EN9.1|TTCA_BURMA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|123600535|sp|Q3JWX0.1|TTCA_BURP1 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830565|sp|A3MND8.1|TTCA_BURM7 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830566|sp|A2S7T4.1|TTCA_BURM9 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830567|sp|A1V7Z5.1|TTCA_BURMS RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830568|sp|A3NQK2.1|TTCA_BURP0 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|205830569|sp|A3N4V9.1|TTCA_BURP6 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|52208369|emb|CAH34303.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52428027|gb|AAU48620.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|76580890|gb|ABA50365.1| PP-loop family family [Burkholderia pseudomallei 1710b]
gi|121227340|gb|ABM49858.1| PP-loop family protein [Burkholderia mallei SAVP1]
gi|124294665|gb|ABN03934.1| PP-loop family protein [Burkholderia mallei NCTC 10229]
gi|126221295|gb|ABN84801.1| PP-loop family protein [Burkholderia pseudomallei 668]
gi|126226031|gb|ABN89571.1| PP-loop family protein [Burkholderia pseudomallei 1106a]
gi|126244128|gb|ABO07221.1| PP-loop family protein [Burkholderia mallei NCTC 10247]
gi|147747841|gb|EDK54917.1| PP-loop family protein [Burkholderia mallei FMH]
gi|148028995|gb|EDK86927.1| PP-loop family protein [Burkholderia mallei 2002721280]
gi|160697867|gb|EDP87837.1| PP-loop family protein [Burkholderia mallei ATCC 10399]
gi|169653006|gb|EDS85699.1| PP-loop family protein [Burkholderia pseudomallei S13]
gi|217391999|gb|EEC32025.1| PP-loop family protein [Burkholderia pseudomallei 576]
gi|225928132|gb|EEH24168.1| PP-loop family protein [Burkholderia pseudomallei Pakistan 9]
gi|238519619|gb|EEP83089.1| PP-loop family protein [Burkholderia mallei GB8 horse 4]
gi|242137697|gb|EES24099.1| PP-loop family protein [Burkholderia pseudomallei 1106b]
gi|243060159|gb|EES42345.1| PP-loop family protein [Burkholderia mallei PRL-20]
gi|254217892|gb|EET07276.1| PP-loop family protein [Burkholderia pseudomallei 1710a]
gi|385345969|gb|EIF52662.1| C32 tRNA thiolase [Burkholderia pseudomallei 1026a]
gi|385346177|gb|EIF52868.1| C32 tRNA thiolase [Burkholderia pseudomallei 1258a]
gi|385357768|gb|EIF63804.1| C32 tRNA thiolase [Burkholderia pseudomallei 1258b]
gi|385363267|gb|EIF69047.1| C32 tRNA thiolase [Burkholderia pseudomallei 354e]
gi|385376847|gb|EIF81481.1| C32 tRNA thiolase [Burkholderia pseudomallei 354a]
gi|385660354|gb|AFI67777.1| C32 tRNA thiolase [Burkholderia pseudomallei 1026b]
gi|403072633|gb|AFR14213.1| PP-loop family protein [Burkholderia pseudomallei BPC006]
Length = 331
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S ALL +L ++L
Sbjct: 36 KEAYENNKLFKRLVRQVGQAIGDYNMIEHGDKVMVCLSGGKDSYALLDIL---LRLRERA 92
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 93 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTKIGVPFHIENQDTYSIV 137
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 138 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 180
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 181 VQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYAKETDLEKYAELREF-PI- 233
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D FP V +F
Sbjct: 234 IPCNLCGSQP--NLKRAEMKALIRDWDKRFPGRVDNMF 269
>gi|323303405|gb|EGA57201.1| Ncs2p [Saccharomyces cerevisiae FostersB]
Length = 493
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 153/379 (40%), Gaps = 68/379 (17%)
Query: 64 CPRC--NTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF------ 115
C RC + N V K+ +C C +++++ K R + K + R KV+ F
Sbjct: 3 CQRCPASARNPATVESRKEKFCDECFIKFVSTKQRKQMMKDEYFRNLFKVIYPFEKEGSV 62
Query: 116 -----------SGSHSSMALLH--LLQEGMQLSSHKRILFSVCAIYIDDGSISQVS---- 158
SGS ++H LL++ Q ++ V ++ ++ ++S +
Sbjct: 63 SKILLPLSLSDSGSLVMXDIVHDLLLEQTKQHNNRTGFTVDVLTVFTEE-NVSVIKERME 121
Query: 159 --ISERKAN--------NAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAK 208
I+E+ + N ++F++ ++ +N ++++ +
Sbjct: 122 SLINEKMSQLNKISNIFNVHFIDVNEFFNNASEVSTFIIDNENFEIFSKSKSVDDSNILT 181
Query: 209 DSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISL 268
EI + + SSR L+ ++ L+ A + I + T L+ II+ +
Sbjct: 182 LKEI--LGKYCLNXSSRSDLISIIKTQLIKHFAYENGYNAIMWGHSMTKLSEVIISLVVK 239
Query: 269 GKGAHVPLDVGFSDDRTGDIIT--------LRPLRDFSSKEVIYYNIFNDLSPVHVPSLA 320
GKG+ + F D + D + L P++D S E+ + +L+ +
Sbjct: 240 GKGSQI---ATFLDSESFDTLNNKPCKYKNLYPMKDLLSVEIESFLQIRNLAQFLINVEE 296
Query: 321 TLADP--------LASL--QKAAES---------FVTDLQTNFPSTVSTVFRTADKLSLD 361
T P L SL QK ++ + D+Q ++ + +STV RTADKL+
Sbjct: 297 TNVKPNCLIARKSLPSLGQQKLVKNMTINEITNKYFQDIQNDYSNIISTVLRTADKLTQP 356
Query: 362 LTSMNVNNTCLLCKAPLDT 380
+SM + C +C++ + T
Sbjct: 357 KSSMAKPSQCQICQSKIYT 375
>gi|379003663|ref|YP_005259335.1| hypothetical protein Pogu_0701 [Pyrobaculum oguniense TE7]
gi|375159116|gb|AFA38728.1| TIGR00269 family protein [Pyrobaculum oguniense TE7]
Length = 329
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 119/313 (38%), Gaps = 44/313 (14%)
Query: 63 LCPRCNTNNGEVVLRLK-DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
LC RC + + + C CL Q + K + + +++ P D V VA SG S
Sbjct: 4 LCTRCGRRPAQYFRAVSGERLCLRCLFQSVERKVLETIRRERLIVPGDYVAVAVSGGKDS 63
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDG-------SISQVSISERKANNAQIATAMK 174
+ LLH+L + + + A +++G +S+ A I +
Sbjct: 64 LVLLHILGSFKERGLLRNVKME--AFTVNEGHPYSCFYRMSRRDYVRELAARFGIEYNVY 121
Query: 175 YFDSYF--TCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTL 232
+F +F T LE + E+ AK M T+ L
Sbjct: 122 HFKDFFGVTALELS-----------------ERLAKAGHEVHM----CTIDG------VL 154
Query: 233 RQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDII-TL 291
R+ L+ ++ TKI TA D A ++ N+ +G + + D D+I +
Sbjct: 155 RRRLMNVVGRRRGWTKIATAHNLDDEAQTVLMNVLMGNLSRFAYYGVYEDAEEKDLIPRI 214
Query: 292 RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTV 351
+P++ +EV Y ++ + + + +A+P L+ + + + PS +
Sbjct: 215 KPMKYIREEEVALYAYYHGIPLMELECPYVVANPRYDLKFT----LAEWEREMPSVKYNL 270
Query: 352 FRTADKLSLDLTS 364
+KL+ L S
Sbjct: 271 VSFGEKLARALRS 283
>gi|20808825|ref|NP_623996.1| ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478816|ref|ZP_05092183.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
gi|20517476|gb|AAM25600.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Thermoanaerobacter tengcongensis MB4]
gi|214035271|gb|EEB75978.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
Length = 300
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 38/254 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + R +C C L Y ++ + K+KM + DKVLV SG SMA
Sbjct: 3 CIRCKKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDKVLVVVSGGKDSMA 62
Query: 124 LLH-LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
L L++EG ++V A+YI+ G I E + ++
Sbjct: 63 LWDVLVKEG----------YNVVAMYINLG------IGEYSNRSQEV------------- 93
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
+E + +N+ L + + E+F D I K+ +T+ S + T+++ L + A
Sbjct: 94 VENFAKKNNLPL---IVKNIKEEFGLD--IYKLSKTLK--RSPCSVCGTIKRYLFNKVAY 146
Query: 243 KLNCTKIFTAETQTDLATKIIANI-SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKE 301
+ I T D A ++ NI + G+ I ++PL + KE
Sbjct: 147 DNGFSVIATGHNLDDEAATLLGNILNWGESYLARQGPVLPQTHPKLIKKVKPLYTLTEKE 206
Query: 302 VIYYNIFNDLSPVH 315
+YY + N + +H
Sbjct: 207 NMYYVLLNKIEFLH 220
>gi|324518064|gb|ADY46994.1| Cytoplasmic tRNA 2-thiolation protein 2 [Ascaris suum]
Length = 164
Score = 49.3 bits (116), Expect = 0.005, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 81 IYCKACLLQYLNHKFRAALGKSKMMRPQDK--VLVAFSGSHSSMALLHLLQEGMQLSSHK 138
IYCK C + + HKF + +GK ++ + +K L+ F G S L+ L+ +G++ HK
Sbjct: 28 IYCKHCFINMVKHKFSSMIGKKRLYKDGEKRETLIVFEGDSPSALLISLVAQGLKADVHK 87
Query: 139 RI 140
R+
Sbjct: 88 RL 89
>gi|238028813|ref|YP_002913044.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia glumae
BGR1]
gi|237878007|gb|ACR30340.1| C32 tRNA thiolase [Burkholderia glumae BGR1]
Length = 329
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 34 KEAYENNKLFKRLARQVGQAIGDYNMIEDGDKVMVCLSGGKDSYAMLDIL---LRLRERA 90
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 91 PIDFEIVAVNLD---------------QKQPGFPEHVLPEYLTRIGVPFHIENQDTYSIV 135
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 136 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 178
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 179 LQTLLLNLFYGGKLKGMPPKLQ---SDD--GRNIVIRPLAYVKEVDLEKYAELREF-PI- 231
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ V D FP V +F
Sbjct: 232 IPCNLCGSQP--NLKRAEMKALVRDWDKRFPGRVDNMF 267
>gi|226711144|sp|B5VQS7.1|CTU2_YEAS6 RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2; AltName:
Full=Needs CLA4 to survive protein 2; AltName:
Full=Thiolation of uridine in cytoplasmic tRNA protein 2
gi|207341751|gb|EDZ69720.1| YNL119Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323331941|gb|EGA73353.1| Ncs2p [Saccharomyces cerevisiae AWRI796]
Length = 493
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 155/390 (39%), Gaps = 90/390 (23%)
Query: 64 CPRC--NTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAF------ 115
C RC + N V K+ +C C +++++ K R + K + R KV+ F
Sbjct: 3 CQRCPASARNPATVESRKEKFCDECFIKFVSTKQRKQMMKDEYFRNLFKVIYPFEKEGSV 62
Query: 116 -----------SGSHSSMALLH--LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISER 162
SGS + ++H LL++ Q ++ V ++ ++ VS+ +
Sbjct: 63 SKILLPLSLSDSGSLVMLDIVHDLLLEQTKQHNNRTGFTVDVLTVFTEEN----VSVIKE 118
Query: 163 KANN------AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP--------LEQFAK 208
+ + +Q+ F+ +F D + + + +E+ E F+K
Sbjct: 119 RMESLINEKMSQLNKISNIFNVHFI--------DVNEFFNNASEVSTFIIDNENFEIFSK 170
Query: 209 DSEINKMFQTVTTL-----------SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
++ + TL SSR L+ ++ L+ A + I + T
Sbjct: 171 SKSVDD--SNILTLKEILGKYCLNNSSRSDLISIIKTQLIKHFAYENGYNAIMWGHSMTK 228
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIIT--------LRPLRDFSSKEVIYYNIFN 309
L+ II+ + GKG+ + F D + D + L P++D S E+ +
Sbjct: 229 LSEVIISLVVKGKGSQI---ATFLDSESFDTLNNKPCKYKNLYPMKDLLSVEIESFLQIR 285
Query: 310 DLSPVHVPSLATLADP--------LASL--QKAAES---------FVTDLQTNFPSTVST 350
+L+ + T P L SL QK ++ + D+Q ++ + +ST
Sbjct: 286 NLAQFLINVEETNVKPNCLIARKSLPSLGQQKLVKNMTINEITNKYFQDIQNDYSNIIST 345
Query: 351 VFRTADKLSLDLTSMNVNNTCLLCKAPLDT 380
V RTADKL+ +SM + C +C++ + T
Sbjct: 346 VSRTADKLTQPKSSMAKPSQCQICQSKIYT 375
>gi|222528237|ref|YP_002572119.1| PP-loop domain-containing protein [Caldicellulosiruptor bescii DSM
6725]
gi|222455084|gb|ACM59346.1| PP-loop domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 301
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + R +C+ C L Y ++ + + + KM +DK+LV SG SMA
Sbjct: 3 CVRCKGKGIIYLKRHNAAFCQDCFLYYYKNQVKKNIKRHKMFDKKDKILVVISGGKDSMA 62
Query: 124 LLHLL-QEGMQLSSHKRILFSVCAIYIDDG 152
L H+L EG ++V +YI+ G
Sbjct: 63 LWHILASEG----------YNVTGMYINLG 82
>gi|407984741|ref|ZP_11165349.1| PP-loop family protein [Mycobacterium hassiacum DSM 44199]
gi|407373576|gb|EKF22584.1| PP-loop family protein [Mycobacterium hassiacum DSM 44199]
Length = 359
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC V + +C AC +Q + RAA+ + +M+ P ++VLVA SG S+A
Sbjct: 3 CDRCEEQAAIEVRHERAAFCPACFVQRCRDQVRAAIDQHRMIHPGERVLVAVSGGKDSLA 62
Query: 124 LLHLL 128
+ LL
Sbjct: 63 VWDLL 67
>gi|350544241|ref|ZP_08913882.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Candidatus Burkholderia
kirkii UZHbot1]
gi|350528028|emb|CCD36832.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Candidatus Burkholderia
kirkii UZHbot1]
Length = 319
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 110/278 (39%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 26 KEAYENNKLFKRIVRQVGQAIGDFNMIEEGDKVMVCLSGGKDSYAMLDIL---MRLRERA 82
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y + L+ + +N Y+ V
Sbjct: 83 PIRFDIVAVNLD---------------QKQPGFPEHVLPEYLSKLDISFHIENQDTYSIV 127
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 128 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 170
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SD+ G + +RPL ++ Y D P+
Sbjct: 171 LQTLLLNLFYGGKLKGMPPKLQ---SDN--GKNVVIRPLAYVKETDLEKYAELRDF-PI- 223
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + + FP V +F
Sbjct: 224 IPCNLCSSQP--NLKRAEMKALIPEWDKRFPGRVDNMF 259
>gi|167579547|ref|ZP_02372421.1| PP-loop family family protein [Burkholderia thailandensis TXDOH]
Length = 331
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S ALL +L ++L
Sbjct: 36 KEAYENNKLFKRLVRQVGQAIGDYNMIEHGDKVMVCLSGGKDSYALLDIL---LRLRERA 92
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 93 PIDFDLVAVNLD---------------QKQPGFPEHVLPEYLTKIGVPFHIENQDTYSIV 137
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 138 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 180
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 181 VQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYAKETDLEKYAELREF-PI- 233
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D FP V +F
Sbjct: 234 IPCNLCGSQP--NLKRAEMKALIRDWDKRFPGRVDNMF 269
>gi|405118914|gb|AFR93687.1| hypothetical protein CNAG_03005 [Cryptococcus neoformans var.
grubii H99]
Length = 548
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 43/178 (24%)
Query: 247 TKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRT-----GDIIT----------- 290
+ + ET T A ++I+ +LG+G +PL++ G +I+
Sbjct: 268 SHVLMGETSTRQAERLISGTALGRGWQLPLELAAVRAEPALPSLGHLISSAEAEAEAEVE 327
Query: 291 ---------------LRPLRDFSSKEV-IY----------YNIFNDLSPVHVPSLATLAD 324
L+P+ D ++KE IY YN + S P+ +
Sbjct: 328 AKAEGEKREIIGFTWLKPMSDLTAKEAAIYCHLRSLSSFTYNARHWDSAGPPPAAGKMKG 387
Query: 325 PLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRA 382
+ SL+ E+F+ L + P+TVST+ RT KL + C +C+ P+D A
Sbjct: 388 GVKSLEMLTENFIAGLGASHPATVSTINRTGGKLVFPGKEED-RPYCPVCQMPVDPSA 444
>gi|344997352|ref|YP_004799695.1| PP-loop domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965571|gb|AEM74718.1| PP-loop domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 303
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + R +C C L Y ++ + + + +M +DKVLV SG SMA
Sbjct: 3 CVRCKKKGVIHLKRHNAAFCHECFLYYYKNQVKKNIKRHRMFDKKDKVLVVISGGKDSMA 62
Query: 124 LLHLL-QEGMQLSSHKRILFSVCAIYIDDGSISQVS 158
L H+L EG ++V +YI+ G I Q S
Sbjct: 63 LWHILASEG----------YNVTGMYINLG-IGQYS 87
>gi|312623404|ref|YP_004025017.1| PP-loop domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203871|gb|ADQ47198.1| PP-loop domain protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 301
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 64 CPRCNTNNGEVVL-RLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C RC N G + L R +C+ C L Y ++ + + + KM +DK+LV SG SM
Sbjct: 3 CVRCK-NKGVIYLKRHNAAFCQDCFLYYYKNQVKRNIKRHKMFDKKDKILVVISGGKDSM 61
Query: 123 ALLHLL 128
AL H+L
Sbjct: 62 ALWHVL 67
>gi|224542853|ref|ZP_03683392.1| hypothetical protein CATMIT_02045 [Catenibacterium mitsuokai DSM
15897]
gi|224524228|gb|EEF93333.1| PP-loop family protein [Catenibacterium mitsuokai DSM 15897]
Length = 289
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 46/183 (25%)
Query: 91 LNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
L +F + +++ P DK+ V SG SM L LLQE L H +
Sbjct: 29 LWRRFIKGIQDYELIEPGDKIAVCISGGKDSMLLAKLLQE---LQRHGKF---------- 75
Query: 151 DGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAE---LPLEQFA 207
+FD F C++ P N KL + AE +P++ +
Sbjct: 76 ------------------------HFDLEFICMDPGYNPANRKLIEENAEKLGIPIQFYE 111
Query: 208 KDSEINKMFQTVTTLSSRQ-YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
D +F V + YL +R+ L A++L C KI +D+ I+ +
Sbjct: 112 SD-----IFNVVHGIEKNPCYLCARMRRGFLYNRAQELGCNKIALGHHYSDVIETILMGM 166
Query: 267 SLG 269
G
Sbjct: 167 MYG 169
>gi|83718777|ref|YP_440848.1| C32 tRNA thiolase [Burkholderia thailandensis E264]
gi|167617641|ref|ZP_02386272.1| PP-loop family family protein [Burkholderia thailandensis Bt4]
gi|257140495|ref|ZP_05588757.1| PP-loop family protein [Burkholderia thailandensis E264]
gi|123538186|sp|Q2T1V1.1|TTCA_BURTA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|83652602|gb|ABC36665.1| PP-loop family family [Burkholderia thailandensis E264]
Length = 331
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S ALL +L ++L
Sbjct: 36 KEAYENNKLFKRLVRQVGQAIGDYNMIEHGDKVMVCLSGGKDSYALLDIL---LRLRERA 92
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 93 PIDFDLVAVNLD---------------QKQPGFPEHVLPEYLTKIGVPFHIENQDTYSIV 137
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 138 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 180
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 181 VQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYAKETDLEKYAELREF-PI- 233
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D FP V +F
Sbjct: 234 IPCNLCGSQP--NLKRAEMKALIRDWDKRFPGRVDNMF 269
>gi|419761104|ref|ZP_14287364.1| tRNA(Ile)-lysidine synthase [Thermosipho africanus H17ap60334]
gi|407513785|gb|EKF48666.1| tRNA(Ile)-lysidine synthase [Thermosipho africanus H17ap60334]
Length = 426
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 84/216 (38%), Gaps = 50/216 (23%)
Query: 91 LNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
L KF + + ++ D+++VA SG S LL+LL + FS+ +D
Sbjct: 3 LLEKFIQKIEEYNLIEENDRIIVAVSGGVDSSVLLNLLARVQEYFK-----FSIFCATVD 57
Query: 151 DG----SISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQF 206
G S +V A + + +K FD + LY +L +E+
Sbjct: 58 HGIRKESKEEVKFVYNMAQSLNVECFIKEFD--------------VPLYAKENKLSIEEA 103
Query: 207 AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
A+ LR L + AKK+N K+ TA DLA ++ +
Sbjct: 104 AR----------------------KLRYKFLNEIAKKINANKVATAHNLNDLAETVLFRL 141
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEV 302
+ G G P + R G+II RPL F KE+
Sbjct: 142 ARGTG---PFGIYGMKPRNGNII--RPLLFFERKEI 172
>gi|377822001|ref|YP_004978372.1| PP-loop domain-containing protein [Burkholderia sp. YI23]
gi|357936836|gb|AET90395.1| PP-loop domain protein [Burkholderia sp. YI23]
Length = 335
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 109/278 (39%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 42 KEAYENNKLFKRIARQVGEAIGDFNMIEQGDKVMVCLSGGKDSYAMLEIL---MRLRERA 98
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y + L+ +N Y+ V
Sbjct: 99 PIDFDIVAVNLD---------------QKQPGFPEHVLPDYLSKLDIPFHIENQDTYSIV 143
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 144 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 186
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y + P+
Sbjct: 187 LQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKYAELREF-PI- 239
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + + FP + +F
Sbjct: 240 IPCNLCGSQP--NLKRAEMKALIREWDKRFPGRIENMF 275
>gi|170696061|ref|ZP_02887198.1| PP-loop domain protein [Burkholderia graminis C4D1M]
gi|170139053|gb|EDT07244.1| PP-loop domain protein [Burkholderia graminis C4D1M]
Length = 324
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 26 KEAYENNKLFKRLARLVGQAIGDFNMIENGDKVMVCLSGGKDSYAMLDVL---MRLRERA 82
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y L+ +N Y+ V
Sbjct: 83 PINFDIVAVNLD---------------QKQPGFPEHVLPEYLKQLDIPFHIENQDTYSIV 127
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 128 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 170
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G I +RPL ++ Y + P+
Sbjct: 171 LQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNIVIRPLAYVKETDLEKYAELREF-PI- 223
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D + FP + +F
Sbjct: 224 IPCNLCGSQP--NLKRAEMKALIRDWEKRFPGRIENMF 259
>gi|167835154|ref|ZP_02462037.1| PP-loop family family protein [Burkholderia thailandensis MSMB43]
gi|424901898|ref|ZP_18325414.1| PP-loop family protein [Burkholderia thailandensis MSMB43]
gi|390932273|gb|EIP89673.1| PP-loop family protein [Burkholderia thailandensis MSMB43]
Length = 331
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S ALL +L ++L
Sbjct: 36 KEAYENNKLFKRLVRQVGQAIGDYNMIEHGDKVMVCLSGGKDSYALLDIL---LRLRERA 92
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 93 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTKIGVPFHIENQDTYSIV 137
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 138 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 180
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y + P+
Sbjct: 181 VQTLLLNMFYGGKLKGMPPKLQ---SDD--GRNVVIRPLAYAKETDLEKYAELREF-PI- 233
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D FP V +F
Sbjct: 234 IPCNLCGSQP--NLKRAEMKALIRDWDKRFPGRVDNMF 269
>gi|126464914|ref|YP_001040023.1| PP-loop domain-containing protein [Staphylothermus marinus F1]
gi|126013737|gb|ABN69115.1| PP-loop domain protein [Staphylothermus marinus F1]
Length = 330
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 125/332 (37%), Gaps = 58/332 (17%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
YCK L+Y + K R + K KM ++ ++VA SG S++LLH L LS KR+
Sbjct: 21 YCKKHFLEYFDKKVRRTIRKYKMFSSREHIVVAVSGGKDSLSLLHYL---YNLS--KRVP 75
Query: 142 -FSVCAIYIDDGSISQVSISE----RKANNAQIATAMKYFDSYFT-CLEQALEPDNMKLY 195
+ + A+ ID+G I++ R N + + F Y L++ + K
Sbjct: 76 GWKITALLIDEGIGGYRDITKKDFLRVVNELGVNYKIASFKEYLGYTLDEIVRIGREK-- 133
Query: 196 TDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQ 255
+ LP R+ LL + A+ L T + TA
Sbjct: 134 -GLPYLPCSYCG-----------------------VFRRYLLNKVARDLGGTVLATAHNL 169
Query: 256 TDLATKIIANI---SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLS 312
D+ + NI S K + G D + +P + KE Y+I N+L
Sbjct: 170 DDVIQTYVMNIINNSWDKILRLAPVTG-PLDHPKFVRRAKPFYEILEKETTLYSILNNLY 228
Query: 313 PVHVPSLATLADPLA--SLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN-- 368
P V P A +++ + +L+ +P T ++ R+ ++ L+
Sbjct: 229 PKFVEC------PYARFNIRWMIRRQLNELEEKYPGTKYSLLRSLLRIISILSKHRDEII 282
Query: 369 ----NTCLLCKAPLD---TRADLASSSMGATR 393
TC +C P RA L +G R
Sbjct: 283 QGEIKTCKVCGEPSAHEICRACLYRYELGIMR 314
>gi|320581685|gb|EFW95904.1| hypothetical protein HPODL_2187 [Ogataea parapolymorpha DL-1]
Length = 1020
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 66 RCNTNNGEVVLRLKDIYCKACLLQYLNH-----KFRAALGKSKMMRPQDKVLVAFSGSHS 120
R N + E ++KD L+QYLN KF+ G S++ RP KVL+ S S
Sbjct: 588 RKNKQHEEEEAQMKD-----TLIQYLNENMQDEKFKVKFGNSRVERP--KVLLPLSYGSS 640
Query: 121 SMALLHLLQEGMQLS-SHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSY 179
S+ALL ++ ++ ++R + + + G + A++ K +
Sbjct: 641 SLALLDMVISHLEEQCQNERAVQGYVLVVLHVGE-----------DTARMERLRKKYSRV 689
Query: 180 FTCLE-QALEPDNMKLYTDVAELPL-EQFA----KDSE---INKMFQTVTTLSSRQYLLQ 230
LE Q + D D+A++ + +++A ++SE + ++ + SSRQ Q
Sbjct: 690 LERLEVQFVTVDPAVFVRDLAKVAVTDEYAVHRTENSESLNLQELLLQFDSRSSRQDFWQ 749
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKG---AHVPLDVGFSDDRTGD 287
+ Q ++ ++A +C+ + + + LA +I+A G+G AH D G D
Sbjct: 750 QVVQEVIFRSAVAHDCSVVIFGHSMSRLAEEILALTVKGRGSETAHRLTD-GTMDYVGCS 808
Query: 288 IITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAE---SFVTDLQTNF 344
+ + PLR+ + E+ Y F+ L + V + ++ A + E + +++ +
Sbjct: 809 LHVIHPLREVLASEIKEYVRFSGLQEM-VATEESVKHKSAKNKTVNELVCEYFETVESEY 867
Query: 345 PSTVSTV-FR 353
P +STV FR
Sbjct: 868 PEVISTVRFR 877
>gi|41055997|ref|NP_956424.1| cytoplasmic tRNA 2-thiolation protein 1 [Danio rerio]
gi|82177120|sp|Q803X1.1|CTU1_DANRE RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=ATP-binding domain-containing protein 3; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|28277535|gb|AAH44158.1| Zgc:55395 [Danio rerio]
gi|161611950|gb|AAI55785.1| Zgc:55395 protein [Danio rerio]
gi|182888740|gb|AAI64148.1| Zgc:55395 protein [Danio rerio]
Length = 343
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD--I 288
R+ L + A LN KI T D+A ++ N+ G A + S GD I
Sbjct: 145 VFRRQALDRGAMMLNVDKICTGHNADDVAETVLMNVLRGDIARLRRCTAISTSSEGDGAI 204
Query: 289 ITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTV 348
+PL+ KE++ Y F L S + P A + A +F+ DL++ PS +
Sbjct: 205 PRCKPLKYAYEKEIVLYAYFKKLDYF---STECIYSPNA-YRGHARAFLKDLESVRPSAI 260
Query: 349 STVFRTADKLSL-DLTSMNVNNTCLLC 374
V + + LS+ + M V TC C
Sbjct: 261 IDVIHSGETLSVKEGVKMPVQGTCSRC 287
>gi|159155715|gb|AAI54794.1| Zgc:55395 protein [Danio rerio]
Length = 343
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD--I 288
R+ L + A LN KI T D+A ++ N+ G A + S GD I
Sbjct: 145 VFRRQALDRGAMMLNVDKICTGHNADDVAETVLMNVLRGDIARLRRCTAISTSSEGDGAI 204
Query: 289 ITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTV 348
+PL+ KE++ Y F L S + P A + A +F+ DL++ PS +
Sbjct: 205 PRCKPLKYAYEKEIVLYAYFKKLDYF---STECIYSPNA-YRGHARAFLKDLESVRPSAI 260
Query: 349 STVFRTADKLSL-DLTSMNVNNTCLLC 374
V + + LS+ + M V TC C
Sbjct: 261 IDVIHSGETLSVKEGVKMPVQGTCSRC 287
>gi|67515561|ref|XP_657666.1| hypothetical protein AN0062.2 [Aspergillus nidulans FGSC A4]
gi|40746084|gb|EAA65240.1| hypothetical protein AN0062.2 [Aspergillus nidulans FGSC A4]
gi|259489748|tpe|CBF90275.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 292
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLD 277
++T+ +S + L L++ A+ L C I ++ LA K +AN+S G+G+ +
Sbjct: 99 SITSATSAADVDSVLLNRLIIAFARSLGCLGIIWGDSDDRLAAKTLANVSKGRGSSLTWQ 158
Query: 278 VGFSDDRTGDIITLRPLRDFSSKEV-IYYNIFNDLSPVHVPSLATLADPL----ASLQKA 332
V G + PLRD + E+ Y N F +L + +P L+D + S+ +
Sbjct: 159 VSDGTSPFGLEFSF-PLRDLFTAELQSYANFFPELLNIIIPD-GPLSDNILTKNLSIDQL 216
Query: 333 AESFVTDLQTNFPSTVSTVFRTADKL 358
+V+ +P +S V RT +KL
Sbjct: 217 MMRYVSSQGAKYPGVMSNVTRTVNKL 242
>gi|392939798|ref|ZP_10305442.1| LOW QUALITY PROTEIN: putative ATPase of the PP-loop superfamily
implicated in cell cycle control [Thermoanaerobacter
siderophilus SR4]
gi|392291548|gb|EIV99991.1| LOW QUALITY PROTEIN: putative ATPase of the PP-loop superfamily
implicated in cell cycle control [Thermoanaerobacter
siderophilus SR4]
Length = 300
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 108/263 (41%), Gaps = 56/263 (21%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + R +C C L Y ++ + K+KM + D+VLV SG SMA
Sbjct: 3 CIRCKKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDRVLVVVSGGKDSMA 62
Query: 124 LLHLL-QEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
L +L +EG ++V A+YI+ G I + S +K
Sbjct: 63 LWDVLAKEG----------YNVVAMYINLG-IGEYSNRSQKV------------------ 93
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
+E + +N+ L + + E+F D I K+ +T+ S + T+++ L + A
Sbjct: 94 VENFAKKNNLPL---IVKNIKEEFGLD--IYKLSKTLK--RSPCSVCGTIKRYLFNKVAY 146
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSD-DRTGDII---------TLR 292
+ I T D A ++ NI L+ G S R G ++ ++
Sbjct: 147 DNGFSVIATGHNLDDEAATLLGNI---------LNWGESYLARQGPVLPQTHPETYKKVK 197
Query: 293 PLRDFSSKEVIYYNIFNDLSPVH 315
PL + KE +YY + N + +H
Sbjct: 198 PLYTLTEKENMYYVLLNKIEFLH 220
>gi|449517737|ref|XP_004165901.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like, partial
[Cucumis sativus]
Length = 254
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 10/79 (12%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRI- 140
+C C L KFR A+ + M+ P DKVLVAFSG S L + E MQ+ +H
Sbjct: 75 FCSDCFRSNLFAKFRQAVTSNAMISPSDKVLVAFSGGPCSRVALQFVHE-MQVKAHNNFE 133
Query: 141 --------LFSVCAIYIDD 151
+F V YI++
Sbjct: 134 ASRDRSLQVFGVGVAYINE 152
>gi|167039805|ref|YP_001662790.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X514]
gi|300915540|ref|ZP_07132850.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
gi|307724869|ref|YP_003904620.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X513]
gi|166854045|gb|ABY92454.1| PP-loop domain protein [Thermoanaerobacter sp. X514]
gi|300888404|gb|EFK83556.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
gi|307581930|gb|ADN55329.1| PP-loop domain protein [Thermoanaerobacter sp. X513]
Length = 300
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 38/254 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + R +C C L Y ++ + K+KM + D+VLV SG SMA
Sbjct: 3 CIRCKKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDRVLVVVSGGKDSMA 62
Query: 124 LLH-LLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
L L++EG ++V A+YI+ G I E + ++
Sbjct: 63 LWDVLVKEG----------YNVVAMYINLG------IGEYSNRSQEV------------- 93
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
+E + +N+ L + + E+F D I K+ +T+ S + T+++ L + A
Sbjct: 94 VENFAKKNNLPL---IVKNIKEEFGLD--IYKLSKTLK--RSPCSVCGTIKRYLFNKVAY 146
Query: 243 KLNCTKIFTAETQTDLATKIIANI-SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKE 301
+ I T D A ++ NI + G+ I ++PL + KE
Sbjct: 147 DNGFSVIATGHNLDDEAATLLGNILNWGESYLARQGPVLPQTHPKLIKKVKPLYTLTEKE 206
Query: 302 VIYYNIFNDLSPVH 315
+YY + N + +H
Sbjct: 207 NMYYVLLNKIEFLH 220
>gi|302870896|ref|YP_003839532.1| PP-loop domain-containing protein [Caldicellulosiruptor obsidiansis
OB47]
gi|302573755|gb|ADL41546.1| PP-loop domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 303
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + R +C+ C L Y ++ + + + KM +DK+LV SG SMA
Sbjct: 3 CVRCKGKGIIYLKRHNAAFCQDCFLYYYKNQVKKNIKRHKMFDKKDKILVVISGGKDSMA 62
Query: 124 LLHLL 128
L H+L
Sbjct: 63 LWHIL 67
>gi|310798398|gb|EFQ33291.1| hypothetical protein GLRG_08435 [Glomerella graminicola M1.001]
Length = 390
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 128/311 (41%), Gaps = 47/311 (15%)
Query: 110 KVLVAFSGSHSSMALLHLLQEGMQLSSHK--RILFSVCAIYIDDGSISQVSISERKANNA 167
K L+ S SS +L+ LL +Q K R+ + V ++ID S S A +
Sbjct: 58 KYLLGLSFGSSSASLVQLLDANLQGLKEKNLRVAYEVHVVHIDTDVSGAASTS--SAEGS 115
Query: 168 QIATAMKYFDSYFTCLEQALEP--DNMKLYT-DVAELPL--EQFAKDSEINKMFQTVTTL 222
+ ++ + F + P D + L T D + LP ++ ++ + + ++
Sbjct: 116 AASQLLEKYKERFPNISMQTVPLSDALALDTIDWSVLPALRTDLVPALQVKELIEALPSV 175
Query: 223 SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVG--- 279
+SR +++ L ++LLL A K C + T T LA +A + G+G VP VG
Sbjct: 176 TSRVDIMRLLVRHLLLSLALKSGCHALMLGCTTTALAELTLAETAKGRGFAVPWQVGNGP 235
Query: 280 -----FSDDRTG------------DIITLRPLRDFSSKEVIYY---------NIFNDLSP 313
FS R G I LRD +E++ Y ++ D
Sbjct: 236 VPVTTFS--RQGAEGKAAGAKEKTTIPVYYLLRDVFRREIVTYVGLVKPPMKDLIRDAGQ 293
Query: 314 VHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLL 373
S ++ S++ + +++ ++PS V+ V RT+ K LT N + C +
Sbjct: 294 ---GSSTIVSHKELSIEDVMARYFEEVEESYPSVVANVVRTSAK----LTRENDGDACAV 346
Query: 374 CKAPLDTRADL 384
C LD + ++
Sbjct: 347 CGMDLDEQGEV 357
>gi|393775176|ref|ZP_10363490.1| PP-loop family protein [Ralstonia sp. PBA]
gi|392717753|gb|EIZ05313.1| PP-loop family protein [Ralstonia sp. PBA]
Length = 329
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 48/259 (18%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+G M+ P D+V+V SG S A+L +L ++L + + F + A+ +D
Sbjct: 51 AIGDYNMIEPGDRVMVCMSGGKDSYAMLDIL---LKLRARAPVAFDIIAVNLD------- 100
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
Q Y T L +N Y+ V + E +
Sbjct: 101 --------QKQPGFPEHVLPDYLTSLGVPFHIENQDTYSIVQRVVPEG-----------K 141
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG---KGAHV 274
T +L SR LR+ +L + A +L TKI + D+ + N+ G KG
Sbjct: 142 TTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDILETLFLNMFYGGKLKGMPP 195
Query: 275 PLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAA- 333
L SDD G + +RPL +++ Y P+ +P + P +L++A
Sbjct: 196 KLQ---SDD--GRNVVIRPLAYVRERDLERYAEVKGF-PI-IPCNLCGSQP--NLKRAEM 246
Query: 334 ESFVTDLQTNFPSTVSTVF 352
++ + + + FP + ++F
Sbjct: 247 KALIREWEKKFPGRIESMF 265
>gi|3036795|emb|CAA18485.1| putative protein [Arabidopsis thaliana]
gi|3805857|emb|CAA21477.1| putative protein [Arabidopsis thaliana]
gi|7270543|emb|CAB81500.1| putative protein [Arabidopsis thaliana]
Length = 527
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 123/312 (39%), Gaps = 50/312 (16%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS--------SMALLHLLQ---- 129
+C C + KFR A+ M+ P D VLVAFSG S S+ +H LQ
Sbjct: 59 FCADCFRNNVFGKFRLAVTSHAMITPSDNVLVAFSGGSSSSKYDVRVSLQFVHELQIKAL 118
Query: 130 EGMQLSSHKRI-LFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALE 188
+ + S + + +F V ++D+ + A + ++ A+++ +CL +
Sbjct: 119 KNYEASRDRSLPVFGVGVAFVDE-------TAAFPALSTEMIDAIEWVRYTVSCLSPPAK 171
Query: 189 PDNMKLYTDVAELPLEQ-FAKDS-----EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
D+ +P+E F DS + K+ +V + ++ LL L+ L + A
Sbjct: 172 --------DLHVVPVESIFGSDSLDARDRLLKLLDSVPDDTGKEDLLLHLKMLSLQKVAA 223
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEV 302
+ ++ + +A+ ++ G+G + D+ D R I L PLRD E+
Sbjct: 224 ENGYNRLVLGSCTSRIASHVLTATVKGRGYSLSADIQHVDARWKVPIVL-PLRDCVRLEI 282
Query: 303 I---------YYNIFNDLSPVHVPSLATL------ADPLASLQKAAESFVTDLQTNFPST 347
Y I LS V L + SFV LQ PS
Sbjct: 283 TRLCLLDGEPYSCIIQLLSDVTYSGQGRLKTVELACRSQCGINDLVSSFVALLQEENPSR 342
Query: 348 VSTVFRTADKLS 359
T+ RTA KL+
Sbjct: 343 ECTIVRTAAKLT 354
>gi|258567078|ref|XP_002584283.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905729|gb|EEP80130.1| predicted protein [Uncinocarpus reesii 1704]
Length = 343
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 209 DSEINKMFQ-TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
D E +F + +T ++R + L + L++ A C I ++ + LA K +AN++
Sbjct: 129 DEEALALFHASFSTATARADIKGILLRRLVVAFATSHECDGILWGDSDSRLAAKTLANVA 188
Query: 268 LGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIF--NDLSPV---HVPSLATL 322
G+G+ + D G PLRD E+ + + + PV + +
Sbjct: 189 KGRGSTLVWDACDGMSPWGIYFNF-PLRDLYKTELELFASYAMRTIEPVIERDPQNFGDM 247
Query: 323 ADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNT-CLLCKAPLDTR 381
+ S++ +V +P ++ + RT DKL T + T C+LC P D
Sbjct: 248 STRHMSIEDLMSQYVMTQGAKYPGVMANIVRTVDKLQ---TPAATDGTLCILCGMPADLA 304
Query: 382 AD 383
AD
Sbjct: 305 AD 306
>gi|253744294|gb|EET00518.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia intestinalis ATCC 50581]
Length = 349
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 126/328 (38%), Gaps = 56/328 (17%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK C + + + + + K ++RP + + + SG S +LH++ + R+ +
Sbjct: 23 CKECFFREVEEEVQRTVEKHSLVRPGESIALGVSGGKDSSVMLHIMH-------NLRLRY 75
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALE--PDNMKL--YTDV 198
+ D + V+++E Y D CL++ + P +K+ + +
Sbjct: 76 RA---FYDGVRFAMVAVNE---------GIQGYRDESLACLQRLHKKYPYELKIVDFEER 123
Query: 199 AELPLEQFAK----DSEINKMF-------------QTVTTLSSRQYLLQTLRQNLLLQAA 241
L+Q DS I++ Q ++ LR+N L +
Sbjct: 124 YGRTLDQIVNTANGDSSIHESVPLKVDLEDDTGRPQPTAKTTTACSFCGILRRNSLSHGS 183
Query: 242 KKLNCTKIFTAETQTDLATKIIANISLGKGAH-VPLDVGFSDDRTGDIITLRPLRDFSSK 300
+ +CTK+ T D A ++ N+ G A V SD G + ++PL S +
Sbjct: 184 LQTHCTKVATGHNADDNAETVLLNLIRGDAAKLVRCSEPLSDLDQG-VARIKPLCHISQR 242
Query: 301 EVIYYNIFN--DLSPVHVPSLATLADPLASLQKAAESFVTDLQT--NFPSTVSTVFRTAD 356
+++ Y D V P T +L+ SF+T L T + + R+
Sbjct: 243 DIVMYAYLQRLDFFSVECPYATT------ALRGKPRSFLTSLCTKPGYSDVTLRIMRSTR 296
Query: 357 KLSL----DLTSMNVNNTCLLCKAPLDT 380
KL L D + + C C++P+ T
Sbjct: 297 KLRLKTTCDTRRLTDLHLCPSCQSPVST 324
>gi|403419692|emb|CCM06392.1| predicted protein [Fibroporia radiculosa]
Length = 398
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 29/203 (14%)
Query: 202 PLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATK 261
PL + + ++ T ++ +QT + LLL A K + + + T LA
Sbjct: 94 PLRPASSVEALRTHLGSLPTTTAAASSVQTFIRLLLLHTAVKTGSSHLVLGTSLTSLAVS 153
Query: 262 IIANISLGKGAHV-------------PLDVGFSDDRT--------GDIITLRPLRDFSSK 300
+I+ +S G+G ++ P + S D T + +RPLRD K
Sbjct: 154 LISGVSQGRGFNIREETQEEWEPDQTPREARESKDSTLPRSQKEKHSVRVVRPLRDIGMK 213
Query: 301 EVIYYNIFNDLSPVHVPSLATLADP--LASLQKAA---ESFVTDLQTNFPSTVSTVFRTA 355
E + + ++ V + +L + F+ L+ ++PSTVSTV RT
Sbjct: 214 ECAIWAWWMNIKVVGQEKWLWSGSKQDIGALTRGEFNLHYFIFGLEKDYPSTVSTVVRTC 273
Query: 356 DKLSLDLTSMNVNNTCLLCKAPL 378
K++ + C LC P+
Sbjct: 274 TKVA---PKGDAAGRCALCARPV 293
>gi|350291090|gb|EGZ72304.1| hypothetical protein NEUTE2DRAFT_90435 [Neurospora tetrasperma FGSC
2509]
Length = 804
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 87/232 (37%), Gaps = 56/232 (24%)
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
K ++ ++F + + +SR LL+ ++LL+ A+K +C + + T LA ++ +
Sbjct: 534 KAEKLQQLFDNLPSTTSRTDLLRLFTRHLLIAEARKSHCHALLLGSSTTALAELTLSETA 593
Query: 268 LGKGAHVPL-----------------------DVGFSDDRTGDIITLRPLRDFSSKEVI- 303
G+G +P D G + ++ PLRD KE++
Sbjct: 594 KGRGFSLPWQINDGVLGVPSFSPSSPSSPSSADAGKTKTEETGMLVYHPLRDALRKELVT 653
Query: 304 YYNIFNDLSPV---------HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRT 354
+ + + +P+ + A ++ S+ + + +++ N+PS V+ V RT
Sbjct: 654 FTKLAGEPTPIADLLPETDSSTTTAAVVSHKDLSIDEVMVRYFAEVEENYPSIVANVART 713
Query: 355 ADKLSLDLTSMNVNNT-----------------------CLLCKAPLDTRAD 383
KL V + C LC PLD D
Sbjct: 714 TGKLMRLFGGAGVADEDGDGEGGKAAGEDESEDNDEERLCGLCSMPLDVLGD 765
>gi|389861274|ref|YP_006363514.1| PP-loop domain-containing protein [Thermogladius cellulolyticus
1633]
gi|388526178|gb|AFK51376.1| PP-loop domain protein [Thermogladius cellulolyticus 1633]
Length = 312
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K YC+ ++Y K + + K +M+ + ++VA SG SMALL+ L + S K
Sbjct: 8 KTAYCRQHFIEYFERKVKKTIRKYRMLGKTEHIVVAVSGGKDSMALLYFLWK----MSKK 63
Query: 139 RILFSVCAIYIDDG-------SISQ-VSISERKANNAQIATAMKYFDSYFTCLEQALEPD 190
+ V A+ +D+G +I+ + ++ER +IA+ +YF L++ +E
Sbjct: 64 NPGWRVSALIVDEGIRGYREYTIANFLRVNERLGVPYKIASFKEYFG---MTLDEIVEEG 120
Query: 191 NMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIF 250
+ + LP R+ LL + A+++ T +
Sbjct: 121 RRR---GLPYLPCAYCG-----------------------VFRRYLLNKVAREMGGTVLA 154
Query: 251 TAETQTDLATKIIANIS---LGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
TA D+ I N++ L K A + G + + ++P + + KE Y +
Sbjct: 155 TAHNMDDVVQTFIMNLAKDTLDKLARLAPVTGIASHEK-FVRRIKPFIEVTEKETSIYAL 213
Query: 308 FNDL 311
N L
Sbjct: 214 LNGL 217
>gi|290987162|ref|XP_002676292.1| hypothetical protein NAEGRDRAFT_36958 [Naegleria gruberi]
gi|284089893|gb|EFC43548.1| hypothetical protein NAEGRDRAFT_36958 [Naegleria gruberi]
Length = 368
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 119/315 (37%), Gaps = 41/315 (13%)
Query: 62 KLCPRCNTNNGEVVLRLKD--IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
K C CN+ N + R K+ + C+ C + + + + +P DKV +A SG
Sbjct: 3 KPCANCNSRNA-ALKRPKNGALICRECFFDLFETEIHETIINNNLFKPGDKVAIAASGGK 61
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG--SISQVSISERKANNAQIATAMKYFD 177
S AL H+++ L+ + + ID+G S+ K N Q +K
Sbjct: 62 DSTALAHIMK---VLNERYNYGLDLYLLSIDEGIKGYRDDSLETVKRNREQYQVPLKIL- 117
Query: 178 SYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLL 237
SY +LY + ++Q L + R+ L
Sbjct: 118 SY------------KELYGWSMDEIVQQIG--------------LKNNCTFCGVFRRQAL 151
Query: 238 LQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVP--LDVGFSDDRTGDIITLRPLR 295
+ ++L K+ T D+A ++ NI G + +D+ D+ I +P +
Sbjct: 152 DRGCEQLKVDKMVTGHNADDIAETVLMNILRGDIGRLERCVDIITHDEGGFSIPRAKPFK 211
Query: 296 DFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTA 355
KE++ Y F L S P A A E + DL+ P T+ + ++A
Sbjct: 212 YTYQKEIVLYAYFKKLDYF---STECSYSPNAYRGHARE-LIKDLEQLRPQTIIDIVKSA 267
Query: 356 DKLSLDLTSMNVNNT 370
++ +++ ++T
Sbjct: 268 EQFEFTNETISEDST 282
>gi|336469276|gb|EGO57438.1| hypothetical protein NEUTE1DRAFT_80998 [Neurospora tetrasperma FGSC
2508]
Length = 835
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 87/232 (37%), Gaps = 56/232 (24%)
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
K ++ ++F + + +SR LL+ ++LL+ A+K +C + + T LA ++ +
Sbjct: 565 KAEKLQQLFDNLPSTTSRTDLLRLFTRHLLIAEARKSHCHALLLGSSTTALAELTLSETA 624
Query: 268 LGKGAHVPL-----------------------DVGFSDDRTGDIITLRPLRDFSSKEVI- 303
G+G +P D G + ++ PLRD KE++
Sbjct: 625 KGRGFSLPWQINDGVLGVPSFSPSSPSSPSSADAGKTKTEETGMLVYHPLRDALRKELVT 684
Query: 304 YYNIFNDLSPV---------HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRT 354
+ + + +P+ + A ++ S+ + + +++ N+PS V+ V RT
Sbjct: 685 FTKLAGEPTPIADLLPETDSSTTTAAVVSHKDLSIDEVMVRYFAEVEENYPSIVANVART 744
Query: 355 ADKLSLDLTSMNVNNT-----------------------CLLCKAPLDTRAD 383
KL V + C LC PLD D
Sbjct: 745 TGKLMRLFGGAGVADEDGDGEGGKAAGEDESEDNDEERLCGLCSMPLDVLGD 796
>gi|222099463|ref|YP_002534031.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
gi|221571853|gb|ACM22665.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
Length = 327
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 47 ITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMM 105
I N+ FS R C +C + V LR +I CK +++ + A+ K KM
Sbjct: 9 IEPNLNSCFSERREKMKCTKCK-RDASVKLRHYNIKLCKEHFNEFIEGRVERAIKKFKMF 67
Query: 106 RPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV----SISE 161
R K+L+A SG S++L H+L K++ + V A++I G V I E
Sbjct: 68 RRDSKILIAVSGGKDSVSLWHML---------KKLGYEVDALFIRAGRSGMVQKAQEIVE 118
Query: 162 RKAN----NAQIATAMKYFDS 178
+ A I A +YF+
Sbjct: 119 KNAELLGTKLHIVDATEYFEG 139
>gi|302845885|ref|XP_002954480.1| hypothetical protein VOLCADRAFT_64899 [Volvox carteri f.
nagariensis]
gi|300260152|gb|EFJ44373.1| hypothetical protein VOLCADRAFT_64899 [Volvox carteri f.
nagariensis]
Length = 455
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 120/311 (38%), Gaps = 59/311 (18%)
Query: 60 ADKLCPRCNTNNGEVVL-RLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGS 118
A +LC RC T+ + + ++ C+ C + + +K+ RP ++V +A SG
Sbjct: 2 APRLCVRCQTSKAMLKRPKTQEQVCRECFFTLFEEEVHETISATKLFRPGERVAIAASGG 61
Query: 119 HSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG--SISQVSISERKANNAQIA---TAM 173
S L H++ L++ + + ID+G S+ K N Q T +
Sbjct: 62 KDSTVLAHIM---TTLNARYGYGLDLFLLSIDEGIAGYRDDSLETVKRNEQQYGIPLTVV 118
Query: 174 KYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLR 233
Y D Y +++ VA++ ++ N F V + Q L
Sbjct: 119 SYKDLYGWTMDEI-----------VAQI-------GTKNNCTFCGV-------FRRQALD 153
Query: 234 QNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT--- 290
+ +L A KI T D+A ++ NI G VP R +IIT
Sbjct: 154 RGAVLAGA-----NKIATGHNADDVAETVLLNILRG---DVP-----RLSRCANIITGGD 200
Query: 291 -----LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFP 345
++P + KE++ Y + L S + P A+ + A F+ DL+ P
Sbjct: 201 SPLPRVKPFKYAYEKEIVLYAYYKKLDYF---STECVYAPYAA-RGFAREFIKDLEAVRP 256
Query: 346 STVSTVFRTAD 356
+ V R+A+
Sbjct: 257 MAIIDVIRSAE 267
>gi|336121482|ref|YP_004576257.1| hypothetical protein Metok_0497 [Methanothermococcus okinawensis
IH1]
gi|334856003|gb|AEH06479.1| protein of unknown function UPF0021 [Methanothermococcus
okinawensis IH1]
Length = 306
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 119/298 (39%), Gaps = 35/298 (11%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
+CK C ++Y+ K R LGK+ +++ + + SG S+ + ++L E + + I+
Sbjct: 22 FCKECFVKYIKKKVRKTLGKN-IIKQNMTIGMGLSGGKDSLVMAYILNEFYKPIPNSNII 80
Query: 142 FSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAEL 201
A+ +D+G I + + + A+K+ + Y + A + K Y
Sbjct: 81 ----ALIVDEG------IEGFRKDGVNM--AIKFCEEY----DIAYKIATFKEYIGYDLD 124
Query: 202 PLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATK 261
L + AKD + T+ S +R+ +L + A C + D+A
Sbjct: 125 ELVKIAKDKNL-----TMNPCS----FCGVIRRKILNKMALNEKCNYLAIGHNLDDMAQA 175
Query: 262 IIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLAT 321
I+ N G + + +G + + ++PL+ EV+ +F DL +
Sbjct: 176 IMMNYIEGDVKKLAI-LGHDANNPMFVKRIKPLKYIPENEVL---LFADLLEIKYHKAPC 231
Query: 322 LADPLASLQKAAE--SFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAP 377
P +S+ AE + L+ N P T ++ +KL L N C C P
Sbjct: 232 ---PYSSMSYRAEISDIIDKLEENHPGTKYSIVSGFEKLLEYLPVEKEMNVCKYCNEP 286
>gi|327401180|ref|YP_004342019.1| hypothetical protein Arcve_1298 [Archaeoglobus veneficus SNP6]
gi|327316688|gb|AEA47304.1| protein of unknown function UPF0021 [Archaeoglobus veneficus SNP6]
Length = 307
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 48/307 (15%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK + + R A+ K +M+ DK+ +A SG S+AL L +L ++ +
Sbjct: 22 CKKHFIYDFEKRVRYAVKKYRMIESGDKIAIALSGGKDSVALTFALD---RLYGERKDVE 78
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
V AI ID+G I + +IA + Q ++ + + +
Sbjct: 79 FV-AITIDEG------IKGYRPPTVEIAREIT---------SQLGIEHHIVSFKENFGMA 122
Query: 203 LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTA-----ETQTD 257
L++ K + + T R+ LL + A++L TK+ TA ETQT
Sbjct: 123 LDEMVKLGD-----KKPCTYCG------VFRKYLLNRTARELGATKLATAHNLDDETQTI 171
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVP 317
L + A+I VP V + G ++ ++P R+ KEV+ Y + DL P+ +
Sbjct: 172 LLNFLQADIE-RLARLVPQRV-----QKGLVMRIKPFREIYEKEVVVYCLLFDL-PMDMN 224
Query: 318 SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVN---NTCLLC 374
P+ + A F+ D + +P +V R+ + L L M N C C
Sbjct: 225 ECPYSYFPVRA---AIRDFLYDFENKYPGRKYSVMRSFETLIPCLKEMFPQIDLNACEKC 281
Query: 375 KAPLDTR 381
P R
Sbjct: 282 GEPTPKR 288
>gi|56756312|gb|AAW26329.1| SJCHGC09506 protein [Schistosoma japonicum]
Length = 211
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 42/208 (20%)
Query: 74 VVLRLKD-IYCKACLLQYLNHKFRAALGKSKMM-RPQDKVLVAFSGSHSSMALLHLLQEG 131
V++R D CK C + HK GK K+ + K+ +AFSG +S ALL LL +
Sbjct: 34 VLIRKDDPALCKTCFINNCLHKINTVFGKYKISDKHHSKMALAFSGGQNSSALLQLLLK- 92
Query: 132 MQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDN 191
H S + ++R N I + F +E N
Sbjct: 93 -----HN----------------SSIVTTKR---NKSITPKL------FHLIESNDSQSN 122
Query: 192 MKLYTDVAE--------LPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKK 243
++L T++ + + +++ + +S+ K T ++ SS+Q LR NLL+ +K
Sbjct: 123 LELITNIMKNTGFEYHIISMDEIS-NSDQYKWKMTSSSFSSKQRFDDYLRLNLLVNCTRK 181
Query: 244 LNCTKIFTAETQTDLATKIIANISLGKG 271
L+CT + E + K + I G+G
Sbjct: 182 LDCTCLILGECSNRVTVKYLLEIIEGRG 209
>gi|284929532|ref|YP_003422054.1| tRNA(Ile)-lysidine synthetase [cyanobacterium UCYN-A]
gi|284809976|gb|ADB95673.1| tRNA(Ile)-lysidine synthetase [cyanobacterium UCYN-A]
Length = 319
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 45/215 (20%)
Query: 91 LNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
L+ K L S ++ P+ ++LVA SG S+ LL ++ + +++ + + C D
Sbjct: 5 LHTKVHKTLQNSLILPPKKRILVAVSGGQDSLCLLKIIMD-LRIKWDWEVSIAHC----D 59
Query: 151 DGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDS 210
G S IS D++K ++ E ++ + K +
Sbjct: 60 HGWPSDTGIS-----------------------------DHVKKISE--EWNIDFYLKRT 88
Query: 211 EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK 270
+I K+ +++ +R++ R +LL+ A++ N T I T T +DLA ++ N+ G
Sbjct: 89 QILKITESI----AREW-----RYKVLLEVARENNFTAIVTGHTLSDLAETVLYNLIRGA 139
Query: 271 GAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYY 305
G+H + + T I +RPL + S E +++
Sbjct: 140 GSHGLSVLTNTRPLTNSINLVRPLLNTSRTETLFF 174
>gi|299749608|ref|XP_002911396.1| hypothetical protein CC1G_14393 [Coprinopsis cinerea okayama7#130]
gi|298408514|gb|EFI27902.1| hypothetical protein CC1G_14393 [Coprinopsis cinerea okayama7#130]
Length = 494
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 148/384 (38%), Gaps = 93/384 (24%)
Query: 44 DEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL---- 99
D E+T+ + F R+ K C +C G +V+R +YCK C + +F+ L
Sbjct: 13 DAEMTRRPK----FDRS-KQCVKCKEQRGNIVIR-HAVYCKQCFFPLIVTRFKKTLEPVV 66
Query: 100 ------GKSKMMRPQDKVLVAFSGSHSSMALLHLL------------QEGMQL---SSHK 138
+ K ++ +++ FSG S LL L+ +E Q+ ++H
Sbjct: 67 NPKPDGPRKKALKANGSLVIGFSGGLGSSVLLDLVSKTYFSGPPTTTKENGQMRGGAAHP 126
Query: 139 R--------ILFSVCAI-YIDDGSISQVSISERKANNAQI-ATAMKY-----FDSYFTCL 183
+ + A+ Y++ S+ I E K ++ T +Y F+ F L
Sbjct: 127 KNRTGADSGVWKGKPAVCYVELASV----IPEGKDKTEEVRKTVQRYSASDGFEFEFVPL 182
Query: 184 --EQALEPDNMKLY-------------TDVAE--LPLEQFAKDSE--------INKMFQT 218
E A + + D+A+ LPL + S +
Sbjct: 183 RIEDAFDDTWWARFGGIDLSTAARSYGADIADELLPLSEIPSSSSTPYTPVQALQTYLSY 242
Query: 219 VTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLD- 277
+ T ++++ +QTL + LLL + + + + + T L+ +IA IS G G V +
Sbjct: 243 LPTPTAKESAIQTLTRLLLLHVSASRDASHLLLGTSLTTLSVNLIAGISQGAGFSVSEES 302
Query: 278 --------------VGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA 323
R + +RPLRD KE ++ ++ L V L++
Sbjct: 303 FEEWSYPTIQRADSPSIEKTRPSKVRIVRPLRDIGIKECGFWMWWSGLPLVGEKRLSSGR 362
Query: 324 DPLASLQKAAESFVTDLQTNFPST 347
+ SL + F+ L+ ++PST
Sbjct: 363 QSIVSLTR---DFIMGLEQDYPST 383
>gi|390938185|ref|YP_006401923.1| PP-loop domain-containing protein [Desulfurococcus fermentans DSM
16532]
gi|390191292|gb|AFL66348.1| PP-loop domain protein [Desulfurococcus fermentans DSM 16532]
Length = 334
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 121/325 (37%), Gaps = 49/325 (15%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
YC+ ++Y K + + K +M+ + ++V SG S+ALLH+L + S K
Sbjct: 22 YCRNHFIEYFEKKVKKTIRKYRMLGKNEHIIVGVSGGKDSIALLHVLHK----LSRKMPG 77
Query: 142 FSVCAIYIDDG--SISQVSISE--RKANNAQIATAMKYFDSYFTC-LEQALEPDNMKLYT 196
+ V A+ +++G + ++ + A ++ + F Y L++ +E +
Sbjct: 78 WRVTAVLVNEGIKGYREKTVENLVKYAAKNEVGYHIVSFKEYIGASLDEIVEKGRAR--- 134
Query: 197 DVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQT 256
+ LP R+ +L +AA++L T I TA
Sbjct: 135 GLPYLPCSYCG-----------------------VFRRYVLNKAARRLGGTVIATAHNLD 171
Query: 257 DLATKIIANISLGKGAHV-PLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
D+ + NI + L SD+ G I ++P KE Y + N L
Sbjct: 172 DVIQTFLMNIVSNSVDKIYKLTPVISDEEGGFIKRIKPFYTVLEKESALYALLNGLIE-- 229
Query: 316 VPSLATLADPLASLQKAAESFVTDLQTNFPSTV-----STVFRTADKLSLDLTSMNVNNT 370
P +++ + +L+ P S + T +K + D ++N
Sbjct: 230 -PEYVQCPYAEYNIRFTIRKMINELEDKHPGVKYGLLNSLISLTQEKQTRD--TVNKKQV 286
Query: 371 CLLCKAPLD---TRADLASSSMGAT 392
C +C P RA L +G T
Sbjct: 287 CKICGEPSSHPVCRACLYRYELGLT 311
>gi|374326060|ref|YP_005084260.1| hypothetical protein P186_0556 [Pyrobaculum sp. 1860]
gi|356641329|gb|AET32008.1| hypothetical protein P186_0556 [Pyrobaculum sp. 1860]
Length = 328
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 116/307 (37%), Gaps = 42/307 (13%)
Query: 63 LCPRCNTNNGEVVLRL--KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
LC RC + LR+ + C CL L K + + KM+ P D V VA SG
Sbjct: 3 LCQRCGKRPAQY-LRVVSGERLCLRCLFTSLEKKVLETIRREKMIIPGDYVAVAVSGGKD 61
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDG-------SISQVSISERKANNAQIATAM 173
S+ LLH+L + K + A I++G +S+ + A+ + +
Sbjct: 62 SLVLLHILGRLRERGLLKEVKME--AFTINEGHPYSCFYRMSRKDYVKEVASKFGVEYNV 119
Query: 174 KYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLR 233
+F F L E+ AK M T+ LR
Sbjct: 120 YHFKDIFGVTAMELS---------------ERLAKAGHEVHM----CTIDG------VLR 154
Query: 234 QNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDII-TLR 292
+ + K+ TKI TA D A + N+ +G + + D D+I ++
Sbjct: 155 RRAMNIIGKRRGWTKIATAHNLDDEAQTALMNVLMGNLSRFRWYGHYEDAEEKDLIPRIK 214
Query: 293 PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVF 352
PL+ +EV Y ++ + + + +A+P L+ + +++ P+ ++
Sbjct: 215 PLKYVREEEVALYAYYHGVPLMELECPYVVANPRYQLKFT----LAEMEREMPTVKYSLV 270
Query: 353 RTADKLS 359
+KL+
Sbjct: 271 SFGEKLA 277
>gi|340939150|gb|EGS19772.1| hypothetical protein CTHT_0042560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 398
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 113/304 (37%), Gaps = 46/304 (15%)
Query: 64 CPRCNTNNGEVVLRLKD--IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
C +C T ++ R K+ CKAC +Q + + SK+ P +KV + SG S
Sbjct: 6 CSKCKTERA-IIKRPKNHAKLCKACFIQVFEDEVHHTIVSSKLFYPGEKVAIGASGGKDS 64
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDG--SISQVSISERKANNAQIATAMK---YF 176
L +L+ L+ + + ID+G S+ K N+ Q +K Y
Sbjct: 65 TVLASVLK---TLNERHNYGLKLVLLSIDEGIKGYRDDSLETVKRNSVQYDMPLKIVSYE 121
Query: 177 DSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNL 236
+ Y ++Q +E T+ ++ Y R+
Sbjct: 122 ELYGWTMDQVVE-----------------------------TIGKKNNCTY-CGVFRRQA 151
Query: 237 LLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF-SDDRTGDIITLRPLR 295
L + AK L + T D+A ++ N+ G A + + D D+ +PL+
Sbjct: 152 LDRGAKMLGIKHVVTGHNADDVAETVLMNLLRGDLARLARSTSIVTGDSRSDVKRSKPLK 211
Query: 296 DFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTA 355
KE++ Y L S + P A + +A + L+ PS + + R+
Sbjct: 212 YSYEKEIVLYAHHKKLDYF---STECIYSPEA-FRGSARGLIKQLEKVRPSAILDIVRSG 267
Query: 356 DKLS 359
+ ++
Sbjct: 268 EDMA 271
>gi|159115787|ref|XP_001708116.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia lamblia ATCC 50803]
gi|157436225|gb|EDO80442.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia lamblia ATCC 50803]
Length = 351
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 125/325 (38%), Gaps = 48/325 (14%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
C+ C L+ + + + + ++RP + + + SG S +LH+L L
Sbjct: 23 CRKCFLRAIEDEVQRTVEMHSLVRPGESIALGVSGGKDSSVMLHILH----------TLR 72
Query: 143 SVCAIYIDDGSISQVSISE-----RKANNAQIATAMKYF----------DSYFTCLEQAL 187
C D V+++E R + A + K + + Y L+Q +
Sbjct: 73 LRCQDVYDGVRFVMVAVNEGIQGYRGESLACLQRLHKKYPYELEIVGFEERYGRTLDQLV 132
Query: 188 EPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
N TD PL+ +D Q ++ LR+N L + + CT
Sbjct: 133 NTVNGNSCTDTFA-PLKADLEDVNDTGRPQPTAKTATACSFCGILRRNSLSYGSLQTQCT 191
Query: 248 KIFTAETQTDLATKIIANISLGKGAH-VPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYN 306
K+ T D A ++ N+ G A V SD G + ++PL + + ++++ Y
Sbjct: 192 KVATGHNADDNAETVLLNLIRGDAAKLVRCSEPLSDLNQG-VARIKPLCNIAQRDIVIYA 250
Query: 307 IFN--DLSPVHVPSLATLADPLASLQKAAESFVTDLQTN--FPSTVSTVFRTADKLSL-- 360
D V P T +L+ SF+T+L T + + R+ KL L
Sbjct: 251 HLQRLDYFSVECPYATT------ALRGKPRSFLTNLCTRPAYSDAALRIIRSTRKLRLKT 304
Query: 361 -----DLTSMNVNNTCLLCKAPLDT 380
LTS+++ C C++P+ T
Sbjct: 305 THETQKLTSLHL---CPSCQSPVST 326
>gi|320100819|ref|YP_004176411.1| PP-loop domain-containing protein [Desulfurococcus mucosus DSM
2162]
gi|319753171|gb|ADV64929.1| PP-loop domain protein [Desulfurococcus mucosus DSM 2162]
Length = 339
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 120/312 (38%), Gaps = 50/312 (16%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
YC+ ++Y K + + K +M+ ++ ++VA SG SMALLH L++ S K
Sbjct: 22 YCRVHFIEYFEKKVKKTIRKYEMLGEREHIIVAVSGGKDSMALLHFLRK----LSRKIPG 77
Query: 142 FSVCAIYIDDG-------SISQVS-ISERKANNAQIATAMKYFDSYFTCLEQALEPDNMK 193
+ + A+ +D+G +I ++ +E ++A+ +Y + L++ +E +
Sbjct: 78 WRITAVLVDEGISGYREKTIRNLAKYAEENGVEYRVASFKEYIGA---TLDEIVEKGRSR 134
Query: 194 LYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAE 253
+ LP R+ +L +AA++L T I TA
Sbjct: 135 ---GLPYLPCSYCG-----------------------VFRRYVLNKAARELGGTVIATAH 168
Query: 254 TQTDLATKIIANI---SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFND 310
D+ I N+ S+ K + G + G I ++P KE Y + N+
Sbjct: 169 NMDDVVQTFIMNLASNSVDKIYRLTPVTG--NGEGGFIRRVKPFYMVLEKESALYALLNN 226
Query: 311 LSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDL-TSMNVNN 369
L P +++ + +L+ +P + + L+ D S
Sbjct: 227 LVE---PEYVQCPYAHYNIRFTIRRMINELEDKYPGVKYGLVNSLLSLTRDRQPSSTRGY 283
Query: 370 TCLLCKAPLDTR 381
C +C P R
Sbjct: 284 ICEICGEPSSHR 295
>gi|407463919|ref|YP_006774801.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus sp.
AR2]
gi|407047107|gb|AFS81859.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus sp.
AR2]
Length = 304
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 34/231 (14%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
C C + + K + K M++ + V VA SG S+ LL ++ E M L+ + RI+
Sbjct: 22 CSQCFSKSIVRKTAKTISKYNMIKHNELVAVAVSGGKDSLVLLKIINE-MALTHNFRII- 79
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
AI ID+G I + +I C E +E + Y D+ EL
Sbjct: 80 ---AITIDEG------IPGYRDEALEIVEKF--------CTELNVE-HKIYSYKDLFELT 121
Query: 203 LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
L++ E K +S + TLR+ + AAK + I T D
Sbjct: 122 LDEALDLRENEK--------TSSCSICGTLRRRAIDHAAKDIGADVIATGHNLDDTLQTF 173
Query: 263 IANISLGKGAHVPLDVGFSDDRT--GDIITLRPLRDFSSKEVIYYNIFNDL 311
+ N+ G VG+ D T D+ ++P + E+++Y ND+
Sbjct: 174 VINMLSGDTT----KVGWMDPDTSENDLRKIKPFCEIYESEIVFYAFTNDM 220
>gi|374301694|ref|YP_005053333.1| PP-loop domain-containing protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332554630|gb|EGJ51674.1| PP-loop domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 311
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 64 CPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C RC EV L +C+ C Y + A+ K M PQDK+LVA SG S+
Sbjct: 3 CRRCR-QEAEVALPSHTTGFCRECFFLYFRRQIERAIKKHGMFGPQDKILVALSGGKDSL 61
Query: 123 ALLHLL 128
AL++ L
Sbjct: 62 ALMYEL 67
>gi|186477640|ref|YP_001859110.1| C32 tRNA thiolase [Burkholderia phymatum STM815]
gi|205830570|sp|B2JIL8.1|TTCA_BURP8 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|184194099|gb|ACC72064.1| PP-loop domain protein [Burkholderia phymatum STM815]
Length = 336
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S A+L +L M+L
Sbjct: 38 KEQYENNKLFKRLARQVGQAIGDFNMIEDGDKVMVCLSGGKDSYAMLDVL---MRLRERA 94
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y + L+ +N Y+ V
Sbjct: 95 PIHFDIVAVNLD---------------QKQPGFPEHVLPEYLSKLDIPYHIENQDTYSIV 139
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 140 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 182
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y P+
Sbjct: 183 LQTLLLNLFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKYAELRQF-PI- 235
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + + FP V +F
Sbjct: 236 IPCNLCGSQP--NLKRAEMKALIREWDKRFPGRVDNMF 271
>gi|255711454|ref|XP_002552010.1| KLTH0B05126p [Lachancea thermotolerans]
gi|238933388|emb|CAR21572.1| KLTH0B05126p [Lachancea thermotolerans CBS 6340]
Length = 477
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 151/375 (40%), Gaps = 71/375 (18%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKS-------KMMRPQDK--- 110
++LC RC T VV R K+ +C AC ++++ K R + K+M P K
Sbjct: 4 NQLCKRCKTAEAAVVSR-KEPFCIACFRKFVSLKQRKQMMSDQYFQDIFKVMYPDKKKTA 62
Query: 111 -----------VLVAFSGSHSSMALLHLLQEGM--QLSSHK-----RILFSVCAIYIDDG 152
+LV S SS+ +L +L + + Q H+ RI VC Y+ D
Sbjct: 63 EEAERLNQGSRILVPLSFGSSSIVMLDVLNDTLTEQREMHRGKTGFRIDVLVC--YLKD- 119
Query: 153 SISQVSISERKANNAQIATAMKYFDS------YFTCLEQAL-EPDNMKLYTDVAELPLEQ 205
+ E K A+ +K D+ + +E ++ PD +++ + +
Sbjct: 120 -----DLEELK-RKAEALMTVKLRDNKNSVKVHLVDIESSMNSPDFTRIHLQDSTYMVRN 173
Query: 206 FA----KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATK 261
+ + + ++ + + S+R+ LL ++ ++ + + I + T LA +
Sbjct: 174 ASVSANEAQSVKELLSSCSNRSAREDLLNIIKTAIIKRFGVQGGYKAILWGHSTTRLADE 233
Query: 262 IIANISLGKGAHVP--LDVGFSDDRTGDII-TLRPLRDFSSKEVIYYNIFNDLSP-VH-- 315
I++ + G+ + + L+ D G+ + L P+RD E+ Y +DL+ +H
Sbjct: 234 IMSLVVKGRASQIANALNDSEEDFEYGEPLRNLHPMRDILLSEIDAYCFVSDLTQYLHKY 293
Query: 316 ----------VPSLATLADPLASLQK------AAESFVTDLQTNFPSTVSTVFRTADKLS 359
+P P A L K A + ++ ++ + +STV RT KL
Sbjct: 294 KPQDTLLVNKIPVAPDAQPPRAKLTKNMTINELARQYFDGIEGSYSNVISTVVRTGAKLD 353
Query: 360 LDLTSMNVNNTCLLC 374
S+ C +C
Sbjct: 354 DPENSLKSKVRCGIC 368
>gi|15789499|ref|NP_279323.1| hypothetical protein VNG0190C [Halobacterium sp. NRC-1]
gi|169235215|ref|YP_001688415.1| hypothetical protein OE1318F [Halobacterium salinarum R1]
gi|10579837|gb|AAG18803.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726281|emb|CAP13062.1| putative tRNA 2-thiolation protein [Halobacterium salinarum R1]
Length = 320
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 18/117 (15%)
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK----GAHVPLDVGFSDDRT-- 285
R++LL + A + + K+ T D A + NI G H +G DDR
Sbjct: 149 FRRDLLAKYADEYDADKLLTGHNLDDEAETALMNILEGNVTQIATHFDASLGSFDDRAEL 208
Query: 286 -GDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQ 341
I +PLRD KEV Y DL PVH +A A+ESF +DLQ
Sbjct: 209 DAMIPRAKPLRDIPEKEVALYAQLRDL-PVH----------MAECPHASESFRSDLQ 254
>gi|326390081|ref|ZP_08211643.1| PP-loop domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|325993946|gb|EGD52376.1| PP-loop domain protein [Thermoanaerobacter ethanolicus JW 200]
Length = 300
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 103/254 (40%), Gaps = 38/254 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + R +C C L Y ++ + K+KM + D+VLV SG SMA
Sbjct: 3 CIRCKKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDRVLVVVSGGKDSMA 62
Query: 124 LLHLL-QEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
L +L +EG ++V A+YI+ G I E + ++
Sbjct: 63 LWDVLAKEG----------YNVVAMYINLG------IGEYSNRSQEV------------- 93
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
+E + +N+ L + + E+F D I K+ +T+ S + T+++ L + A
Sbjct: 94 VENFAKKNNLPL---IVKNIKEEFGLD--IYKLSKTLK--RSPCSVCGTIKRYLFNKVAY 146
Query: 243 KLNCTKIFTAETQTDLATKIIANI-SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKE 301
+ I T D ++ NI + G+ I ++PL + KE
Sbjct: 147 DNGFSVIATGHNLDDEVATLLGNILNWGESYLARQGPVLPQTHPKLIKKVKPLYTLTEKE 206
Query: 302 VIYYNIFNDLSPVH 315
+YY + N + +H
Sbjct: 207 NMYYVLLNKIEFLH 220
>gi|402470973|gb|EJW04929.1| TIGR00269 family protein [Edhazardia aedis USNM 41457]
Length = 307
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 119/308 (38%), Gaps = 58/308 (18%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK+C L+ + + ++ + +K+ VA SG S L ++L + ++ LF
Sbjct: 23 CKSCFLEVFEKEVHKTIIENNLFTKNEKIAVAISGGKDSTVLAYILNLLNKKYNYGVELF 82
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
+C +D+G + + I T K + Y LP
Sbjct: 83 LLC---VDEGITNY--------RDHSIETVKKNQEDY--------------------HLP 111
Query: 203 LEQFAKDSEIN----KMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L+ + N + Q + S+ Y LR+ L + A+ L ++I T D+
Sbjct: 112 LKIVSYQEYFNITMDAIVQKIGRKSNCTY-CGILRRQALEKGAQNLGVSQIVTGHNADDM 170
Query: 259 ATKIIANISLGKGAHV-------PLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDL 311
A I+ N+ G + + GF+ R+ +P + KE++ Y+ + +L
Sbjct: 171 AETILMNLLRGDFNRLYRSSLIKSISNGFNIPRS------KPFKFMFEKEIVMYSFYRNL 224
Query: 312 SPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNNT 370
H S P + + A F+ +L+ P + + + D L +LD+T N T
Sbjct: 225 ---HYFSTECCYSP-GAYRGHARLFIKELERKNPRIILNIINSCDDLENLDVT----NRT 276
Query: 371 CLLCKAPL 378
CK L
Sbjct: 277 IFKCKKCL 284
>gi|392391797|ref|YP_006428399.1| tRNA(Ile)-lysidine synthetase [Desulfitobacterium dehalogenans ATCC
51507]
gi|390522875|gb|AFL98605.1| tRNA(Ile)-lysidine synthetase [Desulfitobacterium dehalogenans ATCC
51507]
Length = 472
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 115/264 (43%), Gaps = 51/264 (19%)
Query: 103 KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIY--IDDGSISQVSIS 160
+++ P +VL+A SG SMAL H+L ++ ++I + ++ + + S + +
Sbjct: 12 QLIVPGSRVLMAVSGGPDSMALAHILWRYVKEMKEQKITLVITHVHHGVREESDDEEKMV 71
Query: 161 ERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVT 220
+ A + +I + FDS +++AK + K FQT
Sbjct: 72 KSMARDWEIPCLIHRFDS-------------------------KEYAKS--VGKSFQT-- 102
Query: 221 TLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF 280
++R++ ++++ +K NCT + TA D A ++ + G G G
Sbjct: 103 --AAREWRYACWKEDM-----RKENCTLLATAHHLGDQAETVLYRLLRGSGT-----AGL 150
Query: 281 SD--DRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVT 338
+ + G++I RPL + ++++ Y N+ P + + +P+ + K +
Sbjct: 151 AGIYPQKGELI--RPLLSVTKEDILEY-CRNENLPYALD--CSNEEPIYARNKIRLQLLP 205
Query: 339 DLQTNF-PSTVSTVFRTADKLSLD 361
+LQ + P V T+ RTA+ L D
Sbjct: 206 ELQREYNPKIVETLGRTAEVLRWD 229
>gi|340514229|gb|EGR44495.1| predicted protein [Trichoderma reesei QM6a]
Length = 394
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 113/304 (37%), Gaps = 46/304 (15%)
Query: 64 CPRCNTNNGEVVLRLKDIY--CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
C RC TN VV R K+ + C+ C + + + SK+ P +KV + SG S
Sbjct: 6 CVRCQTNKA-VVKRPKNHHKLCRECFINVFEDEVHHTIVSSKLFYPGEKVAIGASGGKDS 64
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF--DSY 179
L +L+ L+ + + + ID+G +K + DS
Sbjct: 65 TVLASVLK---TLNERHKYELDLVLLSIDEG--------------------IKGYRDDSL 101
Query: 180 FTCLEQALEPDNMKLYTDVAELPLEQFAKDSEIN-KMFQTVTTLSSRQ--YLLQTLRQNL 236
T A++ D +PL+ D M Q V T+ + R+
Sbjct: 102 ETVKRNAVQYD----------MPLKIVGYDELYGWTMDQVVETIGKKGNCTYCGVFRRQA 151
Query: 237 LLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF-SDDRTGDIITLRPLR 295
L + AK L + T D+A ++ N+ G + + D+ +PL+
Sbjct: 152 LDRGAKTLGIKHVVTGHNADDVAETVLMNLLRGDLPRLSRSTSIVTGGSLNDVKRSKPLK 211
Query: 296 DFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTA 355
KE++ Y L S + P A + A S + +L+ PS + + R+
Sbjct: 212 YAYEKEIVLYAHHKKLDYF---STECIYSPEA-FRGTARSLIKNLEKVRPSAILDIVRSG 267
Query: 356 DKLS 359
+ ++
Sbjct: 268 EDMA 271
>gi|421497841|ref|ZP_15944989.1| hypothetical protein B224_001786 [Aeromonas media WS]
gi|407183164|gb|EKE57073.1| hypothetical protein B224_001786 [Aeromonas media WS]
Length = 302
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 110/280 (39%), Gaps = 46/280 (16%)
Query: 76 LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLS 135
L K+ Y L + L A+ M+ DK++V SG S A+L +L M L
Sbjct: 5 LNAKEKYSFNKLQKRLRRNVGQAIADFNMIEEGDKIMVCLSGGKDSFAMLDIL---MSLK 61
Query: 136 SHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLY 195
+ I F + A+ +D Q E + + + + +E D +
Sbjct: 62 ASAPIHFDLVAVNLDQ---KQPGFPEHVLPEYLVTLGVDF---------KIVEEDTYSIV 109
Query: 196 TD-VAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAET 254
D V E +T L SR LR+ +L + A++L CTKI
Sbjct: 110 KDKVPE---------------GKTTCALCSR------LRRGILYRTAQELGCTKIALGHH 148
Query: 255 QTDLATKIIANISL-GKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSP 313
+ D+ + N+ GK +P + SDD G + +RPL K+++ Y P
Sbjct: 149 RDDILETLFLNMFYGGKLKSMPPKL-VSDD--GKNVVIRPLAYCKEKDLVRYAEVKAF-P 204
Query: 314 VHVPSLATLADPLASLQ-KAAESFVTDLQTNFPSTVSTVF 352
+ +P L +LQ KA + + D FP + T+F
Sbjct: 205 I-IP--CNLCGSQENLQRKAIKQMMQDWDRRFPGRIETMF 241
>gi|221215612|ref|ZP_03588575.1| PP-loop family protein [Burkholderia multivorans CGD1]
gi|221164600|gb|EED97083.1| PP-loop family protein [Burkholderia multivorans CGD1]
Length = 326
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 29 KEAYENNKLFKRIVRQVGQAIGDYNMIEDGDKVMVCLSGGKDSYAMLDIL---LRLRERA 85
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 86 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTQIGVPFHIENQDTYSIV 130
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 131 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 173
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y + P+
Sbjct: 174 VQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKYAELREF-PI- 226
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + + FP V +F
Sbjct: 227 IPCNLCGSQP--NLKRAEMKALIREWDKRFPGRVDNMF 262
>gi|331240178|ref|XP_003332740.1| hypothetical protein PGTG_14405 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309311730|gb|EFP88321.1| hypothetical protein PGTG_14405 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 522
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 141/363 (38%), Gaps = 68/363 (18%)
Query: 62 KLCPRCN-TNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSK-MMRPQDK--------- 110
K C +C TN E+ +C+ C ++ +N KF L +K RP K
Sbjct: 4 KNCCKCQATNTIELSTIRNTTWCRQCFIEQINIKFFQGLKIAKEYCRPPPKRDGIRTITE 63
Query: 111 ---VLVAFSGSHSSMALLHLLQEGMQLSSHKR-------ILFS-VCAIYIDDGS----IS 155
+++ F SS L L++ + + + I FS + I ID GS IS
Sbjct: 64 PASLVIHFKNDLSSFLTLQLMRNYLNTNQDRSTAKWKSPIDFSTIEVISIDFGSASPYIS 123
Query: 156 QVSISERKANNAQ------------------------IATAMKYFDSYFTCLEQALEPDN 191
S SE K N + I FDS + E + +
Sbjct: 124 IDSSSETKLVNEEGNRPPTENEGTLRSMVESLGFSFKILNLDDLFDSPASVEESSPNGCS 183
Query: 192 MKLYTDVAE--LPLEQFA-----------KDSEINKMFQTVTTLS--SRQYLLQTLRQNL 236
+ + D+++ LP++ A K++ + + +T+ L+ SR+ +++L
Sbjct: 184 PRCFVDLSDPNLPIKTIAPTDPGFSTPSSKETAMKPLARTLRPLTQTSRRSFIESLINKR 243
Query: 237 LLQAAKKLNCTKIFT-AETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLR 295
LL K K+ T T +A +A +SLG G + +G S D++ RPL
Sbjct: 244 LLDFCKHKPRNKVLVKPTTSTQMAIDTLAGVSLGNGWSLDQQIGPS-SYIHDVLVCRPLA 302
Query: 296 DFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTA 355
E+ Y+ L + P + A + FV L+ N+P T S + +T
Sbjct: 303 QIVDAELFQYSKLMQLDHPY-PLIHQAPTKKADIPALITDFVVKLEENYPMTSSVINQTV 361
Query: 356 DKL 358
+K+
Sbjct: 362 NKI 364
>gi|156847130|ref|XP_001646450.1| hypothetical protein Kpol_1048p22 [Vanderwaltozyma polyspora DSM
70294]
gi|226711143|sp|A7TGI5.1|CTU2_VANPO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 2
gi|156117127|gb|EDO18592.1| hypothetical protein Kpol_1048p22 [Vanderwaltozyma polyspora DSM
70294]
Length = 485
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 159/373 (42%), Gaps = 66/373 (17%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRA-------------ALGKSKMMRPQD 109
LC RCN N+ V+ R K+ +C C +++ K R + K K+ QD
Sbjct: 12 LCQRCNKNHASVISR-KEKFCTDCFRNFVSLKQRKQMMSDQYYQDIFKVMYKDKLRSEQD 70
Query: 110 --------KVLVAFSGSHSSMALLHLLQEGM--QLSSHK-RILFSVCAI--YIDDG---- 152
K+LV S SS+ +L +L + + Q +H+ + F+V I + D+
Sbjct: 71 AHLQNLNSKILVPLSFGSSSLVMLDILNDTLLEQSITHRGKTGFTVDVIICFHDEQIQNQ 130
Query: 153 ---SISQVSISERKANNAQIATAM----KYFDSYFTCLEQALEPDNMKLYTDVAELPLEQ 205
++S++ ++ K NN +I + ++FD+ L+ + + L L+
Sbjct: 131 IKENVSKLINAKYKENNQKIKFHLVDINQFFDNSPHLQSLVLQETDFL----IKSLNLKD 186
Query: 206 ---FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
K ++++ + S+ Q LL + ++ + + A + + I + T LA ++
Sbjct: 187 QSIIEKKLTLSEILDQCSDRSTYQDLLAFVTKHAIKKYAFQHDFKAILWGHSMTRLADEV 246
Query: 263 IANISLGKGAHVPLDVG---FSDDRTGDIITLRPLRDFSSKEV-------------IYYN 306
I+ I G+G+ + + F ++ L PL+D E+ I YN
Sbjct: 247 ISLIVKGRGSAISSSLNTDDFDENYGNKFKNLYPLKDILLTEIDAYCYNSGLHNYLINYN 306
Query: 307 IFNDLSPVHV----PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDL 362
I + L + + T + ++ + A ++ ++ ++ + +STV RT DKL+
Sbjct: 307 IQDALLVNKINQNTDKIQTNSLKNKTINELARNYFEVIEGDYSNVISTVVRTGDKLAEPK 366
Query: 363 TSMNVN-NTCLLC 374
+ N + C LC
Sbjct: 367 SQENFKISKCNLC 379
>gi|167575096|ref|ZP_02367970.1| PP-loop family protein [Burkholderia oklahomensis C6786]
Length = 331
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 107/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S ALL +L ++L
Sbjct: 36 KEAYENNKLFKRLARQVGQAIGDYNMIEHGDKVMVCLSGGKDSYALLDVL---LRLRERA 92
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y + +N Y+ V
Sbjct: 93 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLATIGVPFHIENQDTYSIV 137
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 138 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 180
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y + P+
Sbjct: 181 LQTLLLNLFYGGKLKGMPPKLQ---SDD--GRNVVIRPLAYVKETDLEKYAELREF-PI- 233
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + + FP V +F
Sbjct: 234 IPCNLCGSQP--NLKRAEMKALIREWDKRFPGRVENMF 269
>gi|221199782|ref|ZP_03572825.1| PP-loop family protein [Burkholderia multivorans CGD2M]
gi|221208613|ref|ZP_03581613.1| PP-loop family protein [Burkholderia multivorans CGD2]
gi|421467436|ref|ZP_15916058.1| PP-loop family protein [Burkholderia multivorans ATCC BAA-247]
gi|421479345|ref|ZP_15927043.1| PP-loop family protein [Burkholderia multivorans CF2]
gi|221171424|gb|EEE03871.1| PP-loop family protein [Burkholderia multivorans CGD2]
gi|221180021|gb|EEE12425.1| PP-loop family protein [Burkholderia multivorans CGD2M]
gi|400223144|gb|EJO53474.1| PP-loop family protein [Burkholderia multivorans CF2]
gi|400233680|gb|EJO63202.1| PP-loop family protein [Burkholderia multivorans ATCC BAA-247]
Length = 331
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 34 KEAYENNKLFKRIVRQVGQAIGDYNMIEDGDKVMVCLSGGKDSYAMLDIL---LRLRERA 90
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 91 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTQIGVPFHIENQDTYSIV 135
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 136 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 178
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y + P+
Sbjct: 179 VQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKYAELREF-PI- 231
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + + FP V +F
Sbjct: 232 IPCNLCGSQP--NLKRAEMKALIREWDKRFPGRVDNMF 267
>gi|345018739|ref|YP_004821092.1| PP-loop domain-containing protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344034082|gb|AEM79808.1| PP-loop domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 300
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + R +C C L Y ++ + K+KM + D+VLV SG SMA
Sbjct: 3 CIRCKKKAVITLKRHNAAFCAECFLHYYRNQVLKNVQKNKMFKKDDRVLVVVSGGKDSMA 62
Query: 124 LLHLL-QEGMQLSSHKRILFSVCAIYIDDG 152
L +L +EG ++V A+YI+ G
Sbjct: 63 LWDVLAKEG----------YNVVAMYINLG 82
>gi|325980894|ref|YP_004293296.1| PP-loop domain-containing protein [Nitrosomonas sp. AL212]
gi|325530413|gb|ADZ25134.1| PP-loop domain protein [Nitrosomonas sp. AL212]
Length = 302
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 110/283 (38%), Gaps = 42/283 (14%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K Y L + L + A+ M+ D+++V SG S ALL +L+ L H
Sbjct: 4 KQQYNANKLQKRLRRQVGTAIADFNMIEAGDRIMVCLSGGKDSYALLDILRN---LQIHS 60
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
+ F + A+ +D Q E+ N M + Q +E D Y+ V
Sbjct: 61 PVNFELIAVNLDQ---KQPGFPEQVLPNYLTQIGMPF---------QIVEQDT---YSVV 105
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
+ E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 106 KRVIAEG-----------KTTCSLCSR------LRRGVLYRVAGELGATKIALGHHRDDI 148
Query: 259 ATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPS 318
+ N+ G SD+ G I +RPL K++ Y +D P+ +P
Sbjct: 149 LETLFLNMFYGGKLKAMPPKLVSDN--GRHIVIRPLAYCKEKDLAAYAEISDF-PI-IP- 203
Query: 319 LATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVFRTADKLSL 360
L +LQ+ A + + FP + T+FR+ + L
Sbjct: 204 -CNLCGSQKNLQRQAIKEMMQQWDKKFPGRLETMFRSIQNIQL 245
>gi|432874965|ref|XP_004072607.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 1
[Oryzias latipes]
gi|432874967|ref|XP_004072608.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 2
[Oryzias latipes]
gi|432874969|ref|XP_004072609.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like isoform 3
[Oryzias latipes]
Length = 343
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 112/297 (37%), Gaps = 39/297 (13%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK C + + + + + + V +A SG S L H+++ L+
Sbjct: 25 CKECFFMAFEEEVHQTIVNASLFKSGETVAIAASGGKDSTVLAHVMK---VLNERYNYGL 81
Query: 143 SVCAIYIDDG--SISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAE 200
+ I +D+G S+ K N Q +K SY +LY +
Sbjct: 82 ELMLISVDEGITGYRDDSLETVKRNQQQYELPLKIV-SY------------EELYGWTMD 128
Query: 201 LPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLAT 260
++Q + + N F V R+ L + A L KI T D+A
Sbjct: 129 AIVKQVGRKN--NCTFCGV------------FRRQALDRGALMLKVDKICTGHNADDVAE 174
Query: 261 KIIANISLGKGAHVPLDVGFSDDRTGDIITLR--PLRDFSSKEVIYYNIFNDLSPVHVPS 318
++ N+ G A + S G+ + R PL+ KE++ Y F L S
Sbjct: 175 TVLMNVLRGDIARLRRCTTISTASEGEGVVPRCKPLKYAYEKEIVLYAYFKKLDYF---S 231
Query: 319 LATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL-DLTSMNVNNTCLLC 374
+ P A + A +F+ DL++ PS++ + + + LS+ + M V TC C
Sbjct: 232 TECIYSPNA-YRGHARTFLKDLESIRPSSIVDIIHSGENLSVREGVKMPVQGTCSRC 287
>gi|145517674|ref|XP_001444720.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412142|emb|CAK77323.1| unnamed protein product [Paramecium tetraurelia]
Length = 357
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 223 SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSD 282
S+R+ ++ ++Q+++ A K I + LA + + +S G+G + ++
Sbjct: 124 SAREDFVRLIKQHIIYDYAIKNGYQNICFGQNGQRLAADLFSQLSKGRGLSLQSATKYNF 183
Query: 283 DRT-----GDIITLRPLRDFSSKEVIYY-------NIFNDLSPVHVPSLATLADPLASLQ 330
T + L PL++ +K+++YY N N + H+ ++ ++
Sbjct: 184 QFTYPLNQNKLQILHPLKELLNKDILYYLRLKSNINFPNFILGQHLSNIVKNKPAQGNID 243
Query: 331 KAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLC 374
E F+ LQ FPST TV +A+K+++ + + C LC
Sbjct: 244 HLLEQFIDKLQEGFPSTTFTVLSSAEKVTIK--PLQQQSHCPLC 285
>gi|383783739|ref|YP_005468306.1| ATPase, PPloop superfamily [Leptospirillum ferrooxidans C2-3]
gi|383082649|dbj|BAM06176.1| putative ATPase, PPloop superfamily [Leptospirillum ferrooxidans
C2-3]
Length = 319
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 92/242 (38%), Gaps = 35/242 (14%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C C + R +C C +YL + R + + +M P D++L+A SG S+A
Sbjct: 3 CRVCKKKAVIAIPRHNTAFCADCFDKYLMDQVRKTIKEFRMFEPGDRILLAVSGGKDSLA 62
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCL 183
L +L KR+ V ++D G ISE + + A Y +
Sbjct: 63 LWEIL---------KRLELDVLGYHLDLG------ISEYSKESTEKTRAFAEKRGYPLII 107
Query: 184 EQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKK 243
E+ +E + +AE + + LS R +L +AA++
Sbjct: 108 EE-IESETGATLPVIAE----------STKRPPCSACGLSKR---------HLFNRAARQ 147
Query: 244 LNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVI 303
C + T D A++++ NI + ++ G I ++PL + KE+
Sbjct: 148 HGCQVLATGHNLDDEASRLLGNILHWQDGYLEKQSPSLPAEGGLIRKVKPLNRLTEKEMA 207
Query: 304 YY 305
Y
Sbjct: 208 TY 209
>gi|302038685|ref|YP_003799007.1| putative P-loop ATPase [Candidatus Nitrospira defluvii]
gi|300606749|emb|CBK43082.1| putative PP-loop ATPase, YdaO type [Candidatus Nitrospira defluvii]
Length = 305
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 77 RLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLL 128
R +CK C +++ + A+ KM P+D++LVA SG S+AL H+L
Sbjct: 9 RHNAAFCKGCFTTFVHEQVARAIKSFKMFTPEDRILVAVSGGKDSLALWHIL 60
>gi|161526144|ref|YP_001581156.1| C32 tRNA thiolase [Burkholderia multivorans ATCC 17616]
gi|189349141|ref|YP_001944769.1| C32 tRNA thiolase [Burkholderia multivorans ATCC 17616]
gi|205830564|sp|A9AKB0.1|TTCA_BURM1 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|160343573|gb|ABX16659.1| PP-loop domain protein [Burkholderia multivorans ATCC 17616]
gi|189333163|dbj|BAG42233.1| predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Burkholderia multivorans ATCC 17616]
Length = 331
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 34 KEAYEDNKLFKRIVRQVGQAIGDYNMIEDGDKVMVCLSGGKDSYAMLDIL---LRLRERA 90
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 91 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTQIGVPFHIENQDTYSIV 135
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 136 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 178
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y + P+
Sbjct: 179 VQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKYAELREF-PI- 231
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + + FP V +F
Sbjct: 232 IPCNLCGSQP--NLKRAEMKALIREWDKRFPGRVDNMF 267
>gi|332981200|ref|YP_004462641.1| tRNA(Ile)-lysidine synthetase [Mahella australiensis 50-1 BON]
gi|332698878|gb|AEE95819.1| tRNA(Ile)-lysidine synthetase [Mahella australiensis 50-1 BON]
Length = 475
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 49/264 (18%)
Query: 101 KSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSIS 160
K KM++P K++V SG S ALLH+L +S ++ + +++ G +Q S+
Sbjct: 20 KYKMIQPGQKIVVGVSGGPDSSALLHVL-----MSLRGKLDAELIVAHVEHGMRAQQSVE 74
Query: 161 ERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVT 220
+ + Y + Q + + +Y ++P +AK+ +
Sbjct: 75 DAQ---------------YVVSMAQRM---GLSVYVKHCDVP--SYAKEHGL-------- 106
Query: 221 TLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLD--V 278
S++ + +R + Q + C I A + D A I+ +I G G LD V
Sbjct: 107 ---SQEQAGRIIRYDFFRQICRYRGCNSIAVAHNKDDNAETILLHILRGSG----LDGLV 159
Query: 279 GFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVT 338
G R GDII RPL D S ++ Y ++P T DP + +
Sbjct: 160 GIRPVR-GDII--RPLLDVSRTDIEAYCAAAGMNP---RRDYTNNDPSYMRNRIRLKLIP 213
Query: 339 DLQTNF-PSTVSTVFRTADKLSLD 361
L NF P+ V ++ R + LS D
Sbjct: 214 FLSQNFNPNIVDSLVRMSHILSDD 237
>gi|164424150|ref|XP_962810.2| hypothetical protein NCU07877 [Neurospora crassa OR74A]
gi|157070396|gb|EAA33574.2| predicted protein [Neurospora crassa OR74A]
Length = 809
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 83/219 (37%), Gaps = 69/219 (31%)
Query: 197 DVAELPLEQFA---------KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCT 247
D L LE FA K ++ ++F + + +SR LL+ ++LL+ A+K +C
Sbjct: 515 DWEGLGLEDFAGSSSTSTTTKAEKLQQLFDNLPSTTSRTDLLRLFTRHLLIAEARKSHCH 574
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPL-------------------------DVGFSD 282
+ + T LA ++ + G+G +P D G
Sbjct: 575 ALLLGSSTTALAELTLSETAKGRGFSLPWQINDGVLGVPSFSPSSSPSPPSSPADAGKKT 634
Query: 283 --DRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVT-- 338
+ TG ++ PLRD KE++ + LA P+A L +SF T
Sbjct: 635 KMEETG-MLVYHPLRDALRKELVTFT-----------KLAGQPTPIAELLPETDSFTTTA 682
Query: 339 -------------------DLQTNFPSTVSTVFRTADKL 358
+++ N+PS V+ V RT KL
Sbjct: 683 AVVSHKDLSIDEVMVRYFAEVEENYPSIVANVARTTGKL 721
>gi|401825795|ref|XP_003886992.1| adenine nucleotide alpha hydrolase [Encephalitozoon hellem ATCC
50504]
gi|392998149|gb|AFM98011.1| adenine nucleotide alpha hydrolase [Encephalitozoon hellem ATCC
50504]
Length = 314
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 114/335 (34%), Gaps = 72/335 (21%)
Query: 64 CPRCNTNNGEVVLRLKD--IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
C RCN + +V+R KD CK+C + + S M+R D+V V SG S
Sbjct: 3 CMRCNMSQA-IVIRAKDRTKVCKSCFFKGFEADVHETITSSGMLRKGDRVGVGMSGGKDS 61
Query: 122 MALLHLLQ-------EGMQLSSHKRILFSV---CAIYIDDGSISQVSISERKANNAQIAT 171
L ++L G++L +L SV A Y D +S S R +I +
Sbjct: 62 TVLAYVLDLLNKRHGYGVEL-----VLLSVDEGIAGYRDQSIVSVCKNSARLGLELKIVS 116
Query: 172 AMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQT 231
+ F + + Q + Y V
Sbjct: 117 FEELFGTTMDNVVQKIGRKGNCTYCGV--------------------------------- 143
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHV---------PLDVGFSD 282
R+ L AAK++ I T D+A ++ NI G + + P G
Sbjct: 144 FRRQALEDAAKRMGVNVIATGHNADDVAETVLLNIIRGDISRLRRCTLAKTRPQSNG--- 200
Query: 283 DRTGDIIT---LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTD 339
G++++ L+P + KE++ Y L +L L+ V
Sbjct: 201 --KGEMMSLSRLKPFKHIYQKEIVLYAFHKKLEYFSTECTYSLGASRGDLR----MLVKQ 254
Query: 340 LQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLC 374
L+ P + V R+ D L + + C LC
Sbjct: 255 LEREDPKVILNVIRSGDMLQEEEPAHRTPVPCTLC 289
>gi|167585222|ref|ZP_02377610.1| PP-loop domain protein [Burkholderia ubonensis Bu]
Length = 324
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 110/284 (38%), Gaps = 48/284 (16%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 27 KEAYENNKLFKRIVRQVGQAIGDYNMIEHGDKVMVCLSGGKDSYAMLDVL---LRLRERA 83
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 84 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTRIGVPFHIENQDTYSIV 128
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 129 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 171
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y + P+
Sbjct: 172 VQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKYAELREF-PI- 224
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVFRTADKL 358
+P + P +L++A ++ + + FP V +F K+
Sbjct: 225 IPCNLCGSQP--NLKRAEMKALIREWDKRFPGRVDNMFNALAKV 266
>gi|300814739|ref|ZP_07094987.1| PP-loop family protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511126|gb|EFK38378.1| PP-loop family protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 276
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 94 KFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 153
KF A + ++++ DK+ VA SG S+ L L+QE L H+++ FS+ I +D G
Sbjct: 28 KFIKACKEYELIQDGDKIAVAISGGKDSLTLAKLMQE---LKKHRQVDFSLEFIAMDPGY 84
Query: 154 ISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEIN 213
I + S DN+ +P++ + S+I
Sbjct: 85 IKENS-------------------------------DNLLYNCKKLGIPVKLYK--SDIF 111
Query: 214 KMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAH 273
++ + +T S Y+ +R+ L AK+L C K+ D+ I+ NI G +
Sbjct: 112 EVAEKLTNGDSPCYMCARMRRGNLYSKAKELGCNKLALGHHFNDVIETILLNIIFA-GDY 170
Query: 274 VPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPV 314
+ D+ +RP+ + +I + L+P+
Sbjct: 171 KTMMPKLKAKNFSDMELIRPMYLVKEEAIIRFMKSTGLNPL 211
>gi|336121484|ref|YP_004576259.1| PP-loop domain-containing protein [Methanothermococcus okinawensis
IH1]
gi|334856005|gb|AEH06481.1| PP-loop domain protein [Methanothermococcus okinawensis IH1]
Length = 330
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 39/212 (18%)
Query: 91 LNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
++ K + K K++ P+DK++V SG S+ALLHLL+ +R + AI ID
Sbjct: 58 ISQKMGRHISKYKIINPKDKIIVGLSGGKDSLALLHLLE-----PYRRRYGIEIYAITID 112
Query: 151 DGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP--LEQFAK 208
++ I ++N +A+ K+ C + + DV E+ L + K
Sbjct: 113 ---LNINGIRPWSSDNKNMASIKKH------CENLNIPHKIIGFDKDVVEMSKILSENTK 163
Query: 209 DSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKK--LNCTKIFTAETQTDLATKIIANI 266
E + F R+Y+L LL +N KI T D + I+ANI
Sbjct: 164 GIEYSPCFSCSVV---RRYILTNFAMKLLEVNTNNIDINKIKICLGHTLEDNSDTILANI 220
Query: 267 SLGKGAHVPLDVGFSDDRTGDII-TLRPLRDF 297
GD+I TL PL++F
Sbjct: 221 -----------------LKGDVIKTLEPLKNF 235
>gi|282881884|ref|ZP_06290535.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Peptoniphilus
lacrimalis 315-B]
gi|281298293|gb|EFA90738.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Peptoniphilus
lacrimalis 315-B]
Length = 277
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 93 HKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 152
KF A + ++++ DK+ VA SG S+ L L+QE L H+++ FS+ I +D G
Sbjct: 28 RKFIKACKEYELIQDGDKIAVAISGGKDSLTLAKLMQE---LKRHRQVDFSLEFIAMDPG 84
Query: 153 SISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEI 212
I + S DN+ +P++ + S+I
Sbjct: 85 YIKENS-------------------------------DNLLYNCKKLGIPVKLYK--SDI 111
Query: 213 NKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGA 272
++ + +T S Y+ +R+ L AK+L C K+ D+ I+ NI G
Sbjct: 112 FEVAEKLTNGDSPCYMCARMRRGNLYSKAKELGCNKLALGHHFNDVIETILLNIIFA-GD 170
Query: 273 HVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPV 314
+ + D+ +RP+ + +I + L+P+
Sbjct: 171 YKTMMPKLKAQNFSDMELIRPMYLVKEEAIIRFMKSTGLNPL 212
>gi|171323015|ref|ZP_02911676.1| PP-loop domain protein [Burkholderia ambifaria MEX-5]
gi|171091602|gb|EDT37193.1| PP-loop domain protein [Burkholderia ambifaria MEX-5]
Length = 338
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 40 KEAYENNKLFKRIVRQVGQAIGDYNMIEQGDKVMVCLSGGKDSYAMLDVL---LRLRERA 96
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 97 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTQIGVPFHIENQDTYSIV 141
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 142 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 184
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ + + P+
Sbjct: 185 LQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKFAELREF-PI- 237
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D FP V +F
Sbjct: 238 IPCNLCGSQP--NLKRAEMKALIRDWDKRFPGRVDNMF 273
>gi|387903487|ref|YP_006333826.1| trNA(Cytosine32)-2-thiocytidine synthetase [Burkholderia sp. KJ006]
gi|387578379|gb|AFJ87095.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Burkholderia sp. KJ006]
Length = 337
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 34 KEAYENNKLFKRIARQVGQAIGDYNMIEAGDKVMVCLSGGKDSYAMLDVL---LRLRERA 90
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 91 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTQIGVPFHIENQDTYSIV 135
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 136 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 178
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y + P+
Sbjct: 179 LQTLLLNMFYGGKLKGMPPKLQ---SDD--GRNVVIRPLAYVKETDLEKYAELREF-PI- 231
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + + FP V +F
Sbjct: 232 IPCNLCGSQP--NLKRAEMKALIREWDKRFPGRVDNMF 267
>gi|170702531|ref|ZP_02893409.1| PP-loop domain protein [Burkholderia ambifaria IOP40-10]
gi|170132569|gb|EDT01019.1| PP-loop domain protein [Burkholderia ambifaria IOP40-10]
Length = 332
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 34 KEAYENNKLFKRIVRQVGQAIGDYNMIEQGDKVMVCLSGGKDSYAMLDVL---LRLRERA 90
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 91 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTQIGVPFHIENQDTYSIV 135
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 136 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 178
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ + + P+
Sbjct: 179 LQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKFAELREF-PI- 231
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D FP V +F
Sbjct: 232 IPCNLCGSQP--NLKRAEMKALIRDWDKRFPGRVDNMF 267
>gi|134297159|ref|YP_001120894.1| C32 tRNA thiolase [Burkholderia vietnamiensis G4]
gi|205830572|sp|A4JIF6.1|TTCA_BURVG RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|134140316|gb|ABO56059.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia vietnamiensis G4]
Length = 337
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 34 KEAYENNKLFKRIARQVGQAIGDYNMIEAGDKVMVCLSGGKDSYAMLDVL---LRLRERA 90
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 91 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTQIGVPFHIENQDTYSIV 135
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 136 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 178
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y + P+
Sbjct: 179 LQTLLLNMFYGGKLKGMPPKLQ---SDD--GRNVVIRPLAYVKETDLEKYAELREF-PI- 231
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + + FP V +F
Sbjct: 232 IPCNLCGSQP--NLKRAEMKALIREWDKRFPGRVDNMF 267
>gi|409078416|gb|EKM78779.1| hypothetical protein AGABI1DRAFT_40952 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 474
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 95/248 (38%), Gaps = 76/248 (30%)
Query: 291 LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVST 350
+RPL D KE ++ + L V + + +L + F+ L+ ++PSTVST
Sbjct: 282 IRPLCDVGMKECAFWAWWCGLKVVGKHRYSGGRQDIGALTR---DFIMGLEKDYPSTVST 338
Query: 351 VFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVI 410
+ RT +KL+ T + CL+C+ P + T++ ++
Sbjct: 339 IARTCNKLT---TKGGTSMKCLICQRP--------------------AQSGTQDWKQNIS 375
Query: 411 ISSESPDHASKVTTDVNQTVGSQDIPEKSVN----GSEDIPNQIVNGMQYTPNEKVSRTE 466
I S S D+N +D+P VN S+D+P
Sbjct: 376 IRSYS---------DIN----PEDVPPGHVNLASRASDDLP------------------- 403
Query: 467 DNEGPDNLQRSLCYAC------QYVVKDMTSDKDIGEGILKKC-------LQEKSLNEME 513
P ++ S+CYAC + + +T DI + K ++ ++ M
Sbjct: 404 -PSNPHSIASSMCYACHTSWTSKSIRGRITKQTDIPLPVWLKISSSISEERRQITMESMR 462
Query: 514 DQIRDFLL 521
+ I DFLL
Sbjct: 463 NTIDDFLL 470
>gi|258405487|ref|YP_003198229.1| PP-loop domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257797714|gb|ACV68651.1| PP-loop domain protein [Desulfohalobium retbaense DSM 5692]
Length = 299
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + +C+ C LQ+ + + A+ + ++ P+D++LVA SG S+A
Sbjct: 3 CKRCKEPAVVALPSHHTGFCEPCFLQFFQRQVKRAIKEERLFTPEDRILVAVSGGKDSLA 62
Query: 124 LLHLLQE 130
LL L++
Sbjct: 63 LLWQLRD 69
>gi|354612153|ref|ZP_09030105.1| protein of unknown function UPF0021 [Halobacterium sp. DL1]
gi|353191731|gb|EHB57237.1| protein of unknown function UPF0021 [Halobacterium sp. DL1]
Length = 320
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK----GAHVPLDVGFSDDR-- 284
R++LL + A++L+ K+ T D A + NI G H +G D+R
Sbjct: 148 VFRRDLLARYAEELDADKLLTGHNLDDEAETALMNIFEGNVEQVAKHFDASLGPFDERRE 207
Query: 285 -TGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTN 343
G I +PLRD KEV Y +L PVH +A + + + + L+ N
Sbjct: 208 KEGMIPRAKPLRDVPEKEVALYAQLREL-PVH---MAECPHSSEAFRGEIQDLLLQLEEN 263
Query: 344 FPSTVSTVFRTADKLS 359
P T ++ ++L+
Sbjct: 264 HPGTRHSIMAGYEELA 279
>gi|426199419|gb|EKV49344.1| hypothetical protein AGABI2DRAFT_65567 [Agaricus bisporus var.
bisporus H97]
Length = 468
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 282 DDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQ 341
DD + +RPL D KE ++ + L V + + +L + F+ L+
Sbjct: 273 DDIEQTVRVIRPLCDVGMKECAFWAWWCGLKLVGKHRYSGGRQDIGALTR---DFIMGLE 329
Query: 342 TNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAP 377
++PSTVST+ RT +KL+ T + + CL+C+ P
Sbjct: 330 KDYPSTVSTIARTCNKLT---TKGDTSMKCLICQRP 362
>gi|295090663|emb|CBK76770.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Clostridium cf. saccharolyticum K10]
Length = 309
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 104/276 (37%), Gaps = 52/276 (18%)
Query: 95 FRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 154
F AL + M++ D + V SG SM L +QE + H ++ F +
Sbjct: 59 FVKALNEYDMIQEGDNIAVCISGGKDSMLLAKCMQE---ILRHGKMEFGL---------- 105
Query: 155 SQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAEL---PLEQFAKDSE 211
+F ++ P+N ++ + A + P+ F D
Sbjct: 106 ------------------------HFLVMDPGYNPENRRMIEENARIMGIPITVFESD-- 139
Query: 212 INKMFQTVTTL-SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK 270
+F V + S YL +R+ L AKKL C KI D+ I+ ++ G
Sbjct: 140 ---IFNVVVDVDQSPCYLCARMRRGYLYANAKKLGCNKIALGHHFDDVIETILMSMLYGA 196
Query: 271 GAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA---DPLA 327
+ + S + G + +RPL ++ + FN L + T A + A
Sbjct: 197 QVNTMMPKLHSTNFEG-MELIRPLYLVKEADIQAWRDFNQLRFLQCACRFTEAISREEEA 255
Query: 328 SLQKAAE--SFVTDLQTNFPSTVSTVFRTADKLSLD 361
L K E ++ +T P + +F++ + ++LD
Sbjct: 256 HLSKRQEMKELISKFRTINPHIETNIFKSVENVNLD 291
>gi|396081114|gb|AFN82733.1| Adenine nucleotide alpha hydrolase [Encephalitozoon romaleae
SJ-2008]
Length = 314
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 120/334 (35%), Gaps = 54/334 (16%)
Query: 63 LCPRCNTNNGEVVLRLKD--IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
+C RCNT+ +V+R KD CK+C + + S M R DKV + SG
Sbjct: 2 VCVRCNTSQA-IVIRAKDRAKVCKSCFFEGFEVDVHETIVSSGMFRKGDKVGIGMSGGKD 60
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDG--SISQVSISERKANNAQIATAMKY--F 176
S L ++L L+ + + +D+G SI N++++ +K F
Sbjct: 61 STVLAYVLD---LLNKRHGYGVELVLLGVDEGITGYRDQSIMSVCKNSSRLGLKLKIVSF 117
Query: 177 DSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNL 236
+ F + ++K+ + V + Y R+
Sbjct: 118 EETF----------------------------GTTMDKVVRKVGRRGNCTY-CGVFRRQA 148
Query: 237 LLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHV---------PLDVGFSDDRTGD 287
L AA+K+ I T D+A ++ NI G + + P D R
Sbjct: 149 LEDAARKMGVDVIVTGHNADDMAETVLLNIVRGDISRLRRCTLARTKPQRS--EDGRMIS 206
Query: 288 IITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPST 347
+ L+P + KE++ Y L S P AS + + L+ P
Sbjct: 207 LSRLKPFKHIYQKEIVLYAFHKKLEYF---STECTYSPGAS-RGDLRVLMKQLEREDPKV 262
Query: 348 VSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTR 381
+ V R+ D + + ++ C+LC +R
Sbjct: 263 ILDVIRSGDIIQQEDSTHRSPIPCVLCGHSTSSR 296
>gi|363756184|ref|XP_003648308.1| hypothetical protein Ecym_8206 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891508|gb|AET41491.1| Hypothetical protein Ecym_8206 [Eremothecium cymbalariae
DBVPG#7215]
Length = 468
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 148/370 (40%), Gaps = 61/370 (16%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAAL---------------GKSKMMR 106
+LC RC N VV R +D +C C +++++ K R L K +
Sbjct: 5 QLCRRCKQNVASVVSR-QDSFCNECFVRFVSLKPRKQLVLDGYYQDIFKVLYADKQRSAE 63
Query: 107 PQDK------VLVAFSGSHSSMALLHLLQEGM--QLSSHK-----RILFSVC----AIYI 149
D VLV S SS+A+LH+L + Q H+ R+ VC +Y
Sbjct: 64 EADSENGRSTVLVPLSLGSSSLAMLHILDRVLAEQKEMHRGKVGFRVHVLVCYFAGELYD 123
Query: 150 DDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKL-YTDVAELPLEQFAK 208
++++ + N I+ ++ + +FT A E ++ L Y D +E +
Sbjct: 124 MVYRLNRLKQEKLSDNLDCISFSLLDVNQFFT---HADEMHSILLDYEDYTAKCVEHRST 180
Query: 209 DSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISL 268
S + + SS + ++ +R +L+ A + I + T +A +II+ +
Sbjct: 181 YS-LTDLLSVCPNKSSCEDVIGMVRTHLIKSYACQRGMKAILWGHSMTRVADEIISLVVK 239
Query: 269 GKGAHVPLDVGFSD---DRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHV--------- 316
G+G+ + + +D + L PL+D EV Y + L P
Sbjct: 240 GRGSEIATKLNTTDMDSEFGSTFKNLYPLKDVLLSEVDAYCHISGLGPYIYNYDLQDTLL 299
Query: 317 ----------PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN 366
P +A L ++ + + +++++ + +STV +T K + ++
Sbjct: 300 ITKLYEHGDNPKPVKMAKNL-TINELVRQYFDSIESDYSNVISTVVKTGGKFDKPVNMLS 358
Query: 367 VNNTCLLCKA 376
++ C+LC +
Sbjct: 359 EDSRCILCHS 368
>gi|297544017|ref|YP_003676319.1| PP-loop domain-containing protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841792|gb|ADH60308.1| PP-loop domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 300
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC V+ R +C C L Y ++ + K++M +KVLV SG SMA
Sbjct: 3 CVRCKKKAVIVLRRHNAAFCADCFLHYYKNQVLKNIRKNRMFEKGEKVLVVVSGGKDSMA 62
Query: 124 LLHLL-QEGMQLSSHKRILFSVCAIYIDDG 152
L +L +EG ++V A+YI+ G
Sbjct: 63 LWDILVKEG----------YNVVAMYINLG 82
>gi|172061930|ref|YP_001809582.1| C32 tRNA thiolase [Burkholderia ambifaria MC40-6]
gi|205830561|sp|B1YP61.1|TTCA_BURA4 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|171994447|gb|ACB65366.1| PP-loop domain protein [Burkholderia ambifaria MC40-6]
Length = 340
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 37 KEAYENNKLFKRIVRQVGQAIGDYNMIEQGDKVMVCLSGGKDSYAMLDVL---LRLRERA 93
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 94 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTQIGVPFHIENQDTYSIV 138
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 139 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 181
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ + + P+
Sbjct: 182 LQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKFAELREF-PI- 234
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D FP V +F
Sbjct: 235 IPCNLCGSQP--NLKRAEMKALIRDWDKRFPGRVDNMF 270
>gi|115353078|ref|YP_774917.1| C32 tRNA thiolase [Burkholderia ambifaria AMMD]
gi|122322057|sp|Q0BB90.1|TTCA_BURCM RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|115283066|gb|ABI88583.1| tRNA s(2)C-32 sulfurtransferase [Burkholderia ambifaria AMMD]
Length = 334
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 37 KEAYENNKLFKRIVRQVGQAIGDYNMIEQGDKVMVCLSGGKDSYAMLDVL---LRLRERA 93
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 94 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTQIGVPFHIENQDTYSIV 138
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 139 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 181
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ + + P+
Sbjct: 182 LQTLLLNMFYGGKLKGMPPKLQ---SDD--GRNVVIRPLAYVKETDLEKFAELREF-PI- 234
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + D FP V +F
Sbjct: 235 IPCNLCGSQP--NLKRAEMKALIRDWDKRFPGRVDNMF 270
>gi|283798640|ref|ZP_06347793.1| ATPase of the PP family protein [Clostridium sp. M62/1]
gi|291073625|gb|EFE10989.1| PP-loop family protein [Clostridium sp. M62/1]
Length = 334
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 104/276 (37%), Gaps = 52/276 (18%)
Query: 95 FRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 154
F AL + M++ D + V SG SM L +QE + H ++ F +
Sbjct: 84 FVKALNEYDMIQEGDNIAVCISGGKDSMLLAKCMQE---ILRHGKMEFGL---------- 130
Query: 155 SQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAEL---PLEQFAKDSE 211
+F ++ P+N ++ + A + P+ F D
Sbjct: 131 ------------------------HFLVMDPGYNPENRRMIEENARIMGIPITVFESD-- 164
Query: 212 INKMFQTVTTL-SSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK 270
+F V + S YL +R+ L AKKL C KI D+ I+ ++ G
Sbjct: 165 ---IFNVVVDVDQSPCYLCARMRRGYLYANAKKLGCNKIALGHHFDDVIETILMSMLYGA 221
Query: 271 GAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA---DPLA 327
+ + S + G + +RPL ++ + FN L + T A + A
Sbjct: 222 QVNTMMPKLHSTNFEG-MELIRPLYLVKEADIQAWRDFNQLRFLQCACRFTEAISREEEA 280
Query: 328 SLQKAAE--SFVTDLQTNFPSTVSTVFRTADKLSLD 361
L K E ++ +T P + +F++ + ++LD
Sbjct: 281 HLSKRQEMKELISKFRTINPHIETNIFKSVENVNLD 316
>gi|124809392|ref|XP_001348563.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23497459|gb|AAN37002.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 556
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 226 QYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRT 285
QY+ + + N + N + + ++A K G G ++P + D R
Sbjct: 316 QYINELIIYNNIFTYCHNENIHYVIIGDNANNIANKTFLYTIYGYGINIPTHTSYIDSRH 375
Query: 286 GDIITLRPLRDFSSKEVIYYNIFNDL 311
DI+ +RPL+D SKE+ Y+ + ++
Sbjct: 376 NDILFIRPLKDLLSKEIYIYSYYKNI 401
>gi|402565261|ref|YP_006614606.1| PP-loop domain-containing protein [Burkholderia cepacia GG4]
gi|402246458|gb|AFQ46912.1| PP-loop domain protein [Burkholderia cepacia GG4]
Length = 331
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 34 KEAYENNKLFKRIVRQVGQAIGDYNMIEQGDKVMVCLSGGKDSYAMLDVL---LRLRERA 90
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 91 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLTQVGVPFHIENQDTYSIV 135
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 136 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 178
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y + P+
Sbjct: 179 LQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKYAELREF-PI- 231
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + + FP V +F
Sbjct: 232 IPCNLCGSQP--NLKRAEMKALIREWDKRFPGRVDNMF 267
>gi|452991340|emb|CCQ97326.1| tRNA(Ile)-lysidine synthase [Clostridium ultunense Esp]
Length = 460
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 45/259 (17%)
Query: 104 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERK 163
++ D +++ SG SMALL++L L K I F++ +++ G + +++
Sbjct: 14 LIEENDNIVIGLSGGPDSMALLYVL-----LDLRKEIDFNIIIAHVNHGVRGEEALA--- 65
Query: 164 ANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLS 223
D +F +E + N+ Y+ + ++Q+AK+ I
Sbjct: 66 -------------DEWF--VENLAKELNLPYYS--TRVNMDQYAKERRI----------- 97
Query: 224 SRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDD 283
S + + LR + K+ KI A + D A ++ G G + +
Sbjct: 98 SSEEAGRALRYGFFRKILNKIGGGKIAVAHNKNDQAETLLMRFFRGTGIDGLKGMEY--- 154
Query: 284 RTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTN 343
R GDII RP+ +E+ Y + N+ T +P+ + + + ++
Sbjct: 155 RNGDII--RPILGIEREEIEKYLLDNNFE---TRLDKTNLEPIYNRNRIRLELIPYIEKY 209
Query: 344 F-PSTVSTVFRTADKLSLD 361
F P+ + T++RT++ LS+D
Sbjct: 210 FNPNIIDTLWRTSNILSID 228
>gi|395760652|ref|ZP_10441321.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Janthinobacterium
lividum PAMC 25724]
Length = 320
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 97/259 (37%), Gaps = 48/259 (18%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+G M+ DKV+V SG S ALL +L M L I F + A+ +D
Sbjct: 50 AIGDFNMIEDGDKVMVCLSGGKDSYALLDIL---MTLRERAPIHFDIVAVNLD------- 99
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
Q + +Y T L A +N Y+ V L E +
Sbjct: 100 --------QKQPNFPPEILPAYLTELGVAFHIENQDTYSIVKRLIPEG-----------K 140
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG---KGAHV 274
T +L SR LR+ +L + A +L KI + D+ N+ G KG
Sbjct: 141 TTCSLCSR------LRRGILYRVADELGANKIALGHHRDDILETFFLNMFFGGKLKGMPA 194
Query: 275 PLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQ-KAA 333
L SDD G I +RP+ ++ Y P+ +P L +LQ K
Sbjct: 195 KLQ---SDD--GKHIVIRPMAYVKEEDTQRYAQVKGF-PI-IP--CDLCGSQENLQRKQI 245
Query: 334 ESFVTDLQTNFPSTVSTVF 352
+ + + FP V ++F
Sbjct: 246 KGLMREWDKKFPGRVESIF 264
>gi|147674407|ref|YP_001216989.1| C32 tRNA thiolase [Vibrio cholerae O395]
gi|227117898|ref|YP_002819794.1| hypothetical protein VC395_1552 [Vibrio cholerae O395]
gi|262169273|ref|ZP_06036965.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae RC27]
gi|424590925|ref|ZP_18030358.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1037(10)]
gi|205830637|sp|A5F888.1|TTCA_VIBC3 RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|146316290|gb|ABQ20829.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227013348|gb|ACP09558.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|262022086|gb|EEY40795.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae RC27]
gi|408033692|gb|EKG70221.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1037(10)]
Length = 310
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D Q
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLDIL---MSLQKSAPISFELVAVNLDQ---KQP 83
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
E +Y DS + +E D + D ++P +
Sbjct: 84 GFPEH--------VLPEYLDS-LGVEYKIVEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P L +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IP--CNLCGSQPNLQRQAVKQ 227
Query: 336 FVTDLQTNFPSTVSTVFRT 354
+ D FP + T+FR
Sbjct: 228 MLNDWDKRFPGRIETMFRA 246
>gi|347524311|ref|YP_004781881.1| PP-loop domain containing protein [Pyrolobus fumarii 1A]
gi|343461193|gb|AEM39629.1| PP-loop domain protein [Pyrolobus fumarii 1A]
Length = 347
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 96/232 (41%), Gaps = 29/232 (12%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
C+ L+Y + K R + + ++ P D++ VA SG SM+LLH L ++L S + +
Sbjct: 23 CEKHFLEYFDRKVRRTIRRYRLFNPHDRIAVAVSGGKDSMSLLHYL---LRL-SRRAPGW 78
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
+ A+ +D+G R + +++ + E ++E ++ + D
Sbjct: 79 KITALLVDEGI--------RGYREYTVERFLRFVE------EHSVEYRIVR-FKDEVGYT 123
Query: 203 LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
L++ K + + T LR+ L+ +AA+++ T + T D+
Sbjct: 124 LDEIVKIGKERGLPYLPCTYCG------VLRRYLMNKAAREMGATVVATGHNLDDIIQTY 177
Query: 263 IANI---SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDL 311
+ N+ S K A + V + ++P + KE Y + N L
Sbjct: 178 MMNVLSNSWDKIARLG-PVSGPGQHPKFVRKVKPFYEVLEKETTIYAVLNGL 228
>gi|416924926|ref|ZP_11932927.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia sp.
TJI49]
gi|325526540|gb|EGD04096.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Burkholderia sp.
TJI49]
Length = 332
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + + + A+G M+ DKV+V SG S A+L +L ++L
Sbjct: 35 KEAYENNKLFKRIVRQVGQAIGDYNMIEDGDKVMVCLSGGKDSYAMLDVL---LRLRERA 91
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y T + +N Y+ V
Sbjct: 92 PIDFEIVAVNLD---------------QKQPGFPEHVLPEYLTQVGVPFHIENQDTYSIV 136
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 137 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 179
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
++ N+ G KG L SDD G + +RPL ++ Y + P+
Sbjct: 180 LQTLLLNMFYGGKLKGMPPKLQ---SDD--GKNVVIRPLAYVKETDLEKYAELREF-PI- 232
Query: 316 VPSLATLADPLASLQKAA-ESFVTDLQTNFPSTVSTVF 352
+P + P +L++A ++ + + FP V +F
Sbjct: 233 IPCNLCGSQP--NLKRAEMKALIREWDKRFPGRVDNMF 268
>gi|146295177|ref|YP_001178948.1| PP-loop domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408753|gb|ABP65757.1| PP-loop domain protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 303
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC ++ R +C C L Y ++ + K KM +DK+L SG SMA
Sbjct: 3 CVRCKQKAKILLKRHNAAFCNECFLYYYRNQVTKNIRKYKMFDKKDKILAVISGGKDSMA 62
Query: 124 LLH-LLQEGMQLSSHKRILFSVCAIYIDDG 152
L L++EG ++V A+YI+ G
Sbjct: 63 LWDVLVKEG----------YNVVAMYINLG 82
>gi|229529498|ref|ZP_04418888.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae
12129(1)]
gi|419829980|ref|ZP_14353466.1| PP-loop family protein [Vibrio cholerae HC-1A2]
gi|419833557|ref|ZP_14357017.1| PP-loop family protein [Vibrio cholerae HC-61A2]
gi|422917388|ref|ZP_16951710.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-02A1]
gi|423821376|ref|ZP_17716313.1| PP-loop family protein [Vibrio cholerae HC-55C2]
gi|423854508|ref|ZP_17720107.1| PP-loop family protein [Vibrio cholerae HC-59A1]
gi|423881903|ref|ZP_17723707.1| PP-loop family protein [Vibrio cholerae HC-60A1]
gi|423997799|ref|ZP_17741054.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-02C1]
gi|424016692|ref|ZP_17756525.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-55B2]
gi|424019620|ref|ZP_17759409.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-59B1]
gi|424624991|ref|ZP_18063459.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-50A1]
gi|424629485|ref|ZP_18067777.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-51A1]
gi|424633524|ref|ZP_18071630.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-52A1]
gi|424636607|ref|ZP_18074618.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-55A1]
gi|424639264|ref|ZP_18077163.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-56A1]
gi|424648589|ref|ZP_18086255.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-57A1]
gi|443527488|ref|ZP_21093544.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-78A1]
gi|229333272|gb|EEN98758.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae
12129(1)]
gi|341637743|gb|EGS62414.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-02A1]
gi|408013585|gb|EKG51296.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-50A1]
gi|408019062|gb|EKG56480.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-52A1]
gi|408024949|gb|EKG62026.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-55A1]
gi|408027523|gb|EKG64494.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-56A1]
gi|408033826|gb|EKG70346.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-57A1]
gi|408056377|gb|EKG91265.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-51A1]
gi|408621565|gb|EKK94568.1| PP-loop family protein [Vibrio cholerae HC-1A2]
gi|408635328|gb|EKL07541.1| PP-loop family protein [Vibrio cholerae HC-55C2]
gi|408641800|gb|EKL13567.1| PP-loop family protein [Vibrio cholerae HC-60A1]
gi|408642038|gb|EKL13796.1| PP-loop family protein [Vibrio cholerae HC-59A1]
gi|408650160|gb|EKL21453.1| PP-loop family protein [Vibrio cholerae HC-61A2]
gi|408853106|gb|EKL92915.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-02C1]
gi|408860429|gb|EKM00063.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-55B2]
gi|408867922|gb|EKM07273.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-59B1]
gi|443454142|gb|ELT17953.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-78A1]
Length = 310
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D Q
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLDIL---MSLQKSAPISFELVAVNLDQ---KQP 83
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
E + ++Y + +E D + D ++P +
Sbjct: 84 GFPEHVLPEYLESLGVEY---------KIIEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P L +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IP--CNLCGSQPNLQRQAVKQ 227
Query: 336 FVTDLQTNFPSTVSTVFRT 354
+ D FP + T+FR
Sbjct: 228 MLNDWDKRFPGRIETMFRA 246
>gi|410636974|ref|ZP_11347562.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Glaciecola
lipolytica E3]
gi|410143353|dbj|GAC14767.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Glaciecola
lipolytica E3]
Length = 301
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 106/273 (38%), Gaps = 56/273 (20%)
Query: 91 LNHKFRAALGKS----KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCA 146
L + R +GK+ M+ DKV+V SG S +L +L + L + I F + A
Sbjct: 18 LQKRLRRNVGKAIADFNMIEDGDKVMVCLSGGKDSYTMLDIL---IYLKNIAPINFEIIA 74
Query: 147 IYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQF 206
+ +D + D + Y D ++P E
Sbjct: 75 VNLDQK-------------------------------QPGFPADVLPTYLDSLQVPYEIV 103
Query: 207 AKDS-----EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATK 261
+D+ E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 104 TEDTYSIVKEKVPEGKTTCSLCSR------LRRGILYKTATRLGATKIALGHHRDDMLET 157
Query: 262 IIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLAT 321
+ N+ G SDD G + +RPL + +E+ Y+ + P+ +P
Sbjct: 158 LFLNMFYGGRLKSMPPKLVSDD--GKQVVIRPLAYCAEQEISQYSDLLEF-PI-IP--CN 211
Query: 322 LADPLASLQ-KAAESFVTDLQTNFPSTVSTVFR 353
L +LQ K ++ +TD FP + ++FR
Sbjct: 212 LCGSQENLQRKVIKNMLTDWNKRFPGRIESMFR 244
>gi|47205345|emb|CAF93474.1| unnamed protein product [Tetraodon nigroviridis]
Length = 320
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 7/147 (4%)
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT 290
R+ L + A L KI T D+A ++ N+ G A + S GD +
Sbjct: 145 VFRRQALDRGAIMLKVDKICTGHNADDVAETVLMNVLRGDIARLRRCTAISTASEGDGVV 204
Query: 291 LR--PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTV 348
R PL+ KE++ Y F L S + P A + A +F+ DL++ PS++
Sbjct: 205 PRCKPLKYAYEKEIVLYAYFKKLDYF---STECIYSPNA-YRGYARTFLKDLESVRPSSI 260
Query: 349 STVFRTADKLSLDL-TSMNVNNTCLLC 374
V + + LS+ M TC C
Sbjct: 261 MDVIHSGENLSVRADVKMPTQGTCARC 287
>gi|301057224|ref|ZP_07198353.1| PP-loop family protein [delta proteobacterium NaphS2]
gi|300448675|gb|EFK12311.1| PP-loop family protein [delta proteobacterium NaphS2]
Length = 266
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 38/197 (19%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ + KM+R D VLVA SG S+ALL +L+E ++ I + + A+++D G
Sbjct: 15 AISRQKMIRDGDHVLVAISGGKDSLALLWILRERLKRIP---ISYQITAVHVDPGFGGNA 71
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
+ S +S+ T + D + +D+ P A++ E N F
Sbjct: 72 TAS---------------IESFLT----SNGFDYRIIESDIG--PRAHGAENRE-NPCF- 108
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLD 277
L SR +R+ LL + A L C +I + D+ + NI G L
Sbjct: 109 ----LCSR------MRRKLLFEMADALECNRIALGHHKDDIIETLFLNIFYGASISTMLP 158
Query: 278 VGFSDDRTGDIITLRPL 294
V + G + +RPL
Sbjct: 159 V--QELFGGKLTLIRPL 173
>gi|123439490|ref|XP_001310516.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121892289|gb|EAX97586.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 280
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 41/228 (17%)
Query: 91 LNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
L ++ R A + K++ D++L+ SG S+ L H L E M+ K F V A +I
Sbjct: 11 LRNQIRTACEEFKLVEDGDRILIGLSGGKDSLTLTHYLSEWMR---EKNFSFQVVAAHI- 66
Query: 151 DGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTD-VAELPLEQFAKD 209
K +N KY + + C + +E L D + ++ LE K+
Sbjct: 67 ------------KFSNLPYGIDAKYLEDF--CSSRKVE---YHLVEDQIRDVYLENEHKE 109
Query: 210 SEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISL- 268
+ I+ SR R+ L++ A+K NC K+ D+ +I N++
Sbjct: 110 TCIH---------CSR------FRRAKLMELARKFNCNKLTLGHHLDDIVATLIMNMTQH 154
Query: 269 GK--GAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPV 314
G+ G V LD+ +++ ++ +RPL ++ + N+ P
Sbjct: 155 GRFAGMAVKLDITVGEEKY-NMTMIRPLAYTPEMDIKQFCAENEFQPA 201
>gi|206900215|ref|YP_002251379.1| Veg136 protein [Dictyoglomus thermophilum H-6-12]
gi|206739318|gb|ACI18376.1| Veg136 protein [Dictyoglomus thermophilum H-6-12]
Length = 318
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C+ + R +CK ++Y+ + A+ K KM DK+LVA SG S+A
Sbjct: 3 CTKCHNEATIYIRRHNTAFCKEHFIEYIYGQVEKAIKKYKMFEKTDKILVAVSGGKDSLA 62
Query: 124 LLHLL 128
L +L
Sbjct: 63 LWDIL 67
>gi|328869324|gb|EGG17702.1| ATP-binding domain-containing protein 3 [Dictyostelium
fasciculatum]
Length = 396
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 116/326 (35%), Gaps = 50/326 (15%)
Query: 59 RADKLCPRCNTNNGEVVLRLK--DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFS 116
R KLC C V+ R K + CK C Q + + + + + D+V + S
Sbjct: 28 RVAKLCELCKVQR-PVLKRPKTGQMICKECFYQIFEDEIHNTIISNNLFQRGDRVAIGAS 86
Query: 117 GSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG--SISQVSISERKANNAQIATAMK 174
G S L ++ + + LF + ID+G S+ K N Q +K
Sbjct: 87 GGKDSTVLAEIMTTLNKRHDYGLDLF---LLSIDEGITGYRDDSLETVKRNQQQYQIPLK 143
Query: 175 YFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQ 234
SY E N + VAE+ L+ N F V R+
Sbjct: 144 IL-SY-------KELYNWTMDEIVAEIGLKN-------NCTFCGV------------FRR 176
Query: 235 NLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPL 294
L + A L KI T D+A ++ N+ G + + G + +P
Sbjct: 177 QALDRGAVLLGANKIVTGHNADDIAETVLMNLLRGDIPRLQRCINIVTGSEGALPRSKPF 236
Query: 295 RDFSSKEVIYYNIFNDL-----SPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVS 349
+ KE++ Y F L ++ P+ + + A F+ DL+ PS +
Sbjct: 237 KYTYQKEIVMYAYFKKLDYFTTECIYAPN---------AYRGHARDFLKDLEAVRPSIII 287
Query: 350 TVFRTADKLSL-DLTSMNVNNTCLLC 374
+ ++A+ D M V C LC
Sbjct: 288 DIIQSAENFHFRDEIKMPVQRNCNLC 313
>gi|121730376|ref|ZP_01682729.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|121627872|gb|EAX60459.1| conserved hypothetical protein [Vibrio cholerae V52]
Length = 309
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 106/259 (40%), Gaps = 44/259 (16%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D Q
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLDIL---MSLQKSAPISFELVAVNLDQ---KQP 83
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
E + ++Y + +E D + D ++P +
Sbjct: 84 GFPEHVLPEYLESLGVEY---------KIVEEDTYAIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P + P +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IPCNLCGSQP--NLQRQAVKQ 227
Query: 336 FVTDLQTNFPSTVSTVFRT 354
+ D FP + T+FR
Sbjct: 228 MLNDWDKRFPGRIETMFRA 246
>gi|410922313|ref|XP_003974627.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Takifugu
rubripes]
Length = 343
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT 290
R+ L + A L KI T D+A ++ N+ G A + S GD +
Sbjct: 145 VFRRQALDRGAIMLKVDKICTGHNADDVAETVLMNVLRGDIARLRRCTAISTASEGDGVV 204
Query: 291 LR--PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTV 348
R PL+ KE++ Y F L S + P A + A +F+ DL++ PS++
Sbjct: 205 PRCKPLKYAYEKEIVLYAYFKKLDYF---STECIYSPNA-YRGYARTFLKDLESVRPSSI 260
Query: 349 STVFRTADKLSL-DLTSMNVNNTCLLC 374
V + + LS+ + M + TC C
Sbjct: 261 IDVIHSGENLSVREDVKMPMQGTCSRC 287
>gi|153217159|ref|ZP_01950923.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153803581|ref|ZP_01958167.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|153827170|ref|ZP_01979837.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153830588|ref|ZP_01983255.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|229515797|ref|ZP_04405256.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae TMA 21]
gi|229523484|ref|ZP_04412889.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae bv.
albensis VL426]
gi|254286121|ref|ZP_04961081.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|262190246|ref|ZP_06048519.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae CT
5369-93]
gi|297579020|ref|ZP_06940948.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|417824484|ref|ZP_12471074.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE48]
gi|419836278|ref|ZP_14359720.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-46B1]
gi|421342857|ref|ZP_15793262.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-43B1]
gi|421351195|ref|ZP_15801560.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE-25]
gi|423735186|ref|ZP_17708389.1| PP-loop family protein [Vibrio cholerae HC-41B1]
gi|424009115|ref|ZP_17752057.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-44C1]
gi|429884858|ref|ZP_19366465.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae PS15]
gi|124113825|gb|EAY32645.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124120879|gb|EAY39622.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|148873915|gb|EDL72050.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149738932|gb|EDM53254.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150423790|gb|EDN15731.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|229337065|gb|EEO02082.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae bv.
albensis VL426]
gi|229347566|gb|EEO12526.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae TMA 21]
gi|262033864|gb|EEY52331.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae CT
5369-93]
gi|297536614|gb|EFH75447.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|340047488|gb|EGR08412.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE48]
gi|395943374|gb|EJH54049.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-43B1]
gi|395951640|gb|EJH62254.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE-25]
gi|408630222|gb|EKL02850.1| PP-loop family protein [Vibrio cholerae HC-41B1]
gi|408857756|gb|EKL97438.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-46B1]
gi|408864626|gb|EKM04056.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-44C1]
gi|429228374|gb|EKY34296.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae PS15]
Length = 310
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D Q
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLDIL---MSLQKSAPISFELVAVNLDQ---KQP 83
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
E + ++Y + +E D + D ++P +
Sbjct: 84 GFPEHVLPEYLESLGVEY---------KIVEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P L +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IP--CNLCGSQPNLQRQAVKQ 227
Query: 336 FVTDLQTNFPSTVSTVFRT 354
+ D FP + T+FR
Sbjct: 228 MLNDWDKRFPGRIETMFRA 246
>gi|375107550|ref|ZP_09753811.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderiales bacterium JOSHI_001]
gi|374668281|gb|EHR73066.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Burkholderiales bacterium JOSHI_001]
Length = 312
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 103/277 (37%), Gaps = 46/277 (16%)
Query: 87 LLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCA 146
L + L+ + A+ M+ DKV+V SG S ALL +L + L I F + A
Sbjct: 30 LSKRLHRQVGQAITDFNMIEAGDKVMVCLSGGKDSYALLDIL---LNLQKRAPIRFDLVA 86
Query: 147 IYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQF 206
+ +D Q + Y L +N Y+ V L E
Sbjct: 87 VNLD---------------QKQPGFPAEVLPRYLESLGVPFHIENQDTYSIVKRLIPEG- 130
Query: 207 AKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
+T+ +L SR LR+ +L + A +L TKI + D+ ++ N+
Sbjct: 131 ----------KTLCSLCSR------LRRGILYRVAGELGATKIALGHHRDDMVVTLLMNM 174
Query: 267 SLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA 323
G KG L SDD G + +RPL + ++ + P+ SL
Sbjct: 175 FFGSRMKGMPPKL---VSDD--GKNVVIRPLAYVAETDLERWAAHRQF-PIIPCSLCGSQ 228
Query: 324 DPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL 360
D L +Q + + D P + +F ++L
Sbjct: 229 DNLQRVQ--IKQMIRDWDRQHPGRIDNMFSAMGNITL 263
>gi|229521531|ref|ZP_04410950.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae TM
11079-80]
gi|417820838|ref|ZP_12467452.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE39]
gi|421354185|ref|ZP_15804517.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE-45]
gi|423953541|ref|ZP_17734549.1| PP-loop family protein [Vibrio cholerae HE-40]
gi|423982988|ref|ZP_17738100.1| PP-loop family protein [Vibrio cholerae HE-46]
gi|229341629|gb|EEO06632.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae TM
11079-80]
gi|340038469|gb|EGQ99443.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE39]
gi|395953310|gb|EJH63923.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE-45]
gi|408659417|gb|EKL30467.1| PP-loop family protein [Vibrio cholerae HE-40]
gi|408664919|gb|EKL35740.1| PP-loop family protein [Vibrio cholerae HE-46]
Length = 310
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D Q
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLDIL---MSLQKSAPISFELVAVNLDQ---KQP 83
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
E + ++Y + +E D + D ++P +
Sbjct: 84 GFPEHVLPEYLESLGVEY---------KIVEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P L +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IP--CNLCGSQPNLQRQAVKQ 227
Query: 336 FVTDLQTNFPSTVSTVFRT 354
+ D FP + T+FR
Sbjct: 228 MLNDWDKRFPGRIETMFRA 246
>gi|134096346|ref|YP_001101421.1| C32 tRNA thiolase [Herminiimonas arsenicoxydans]
gi|205830596|sp|A4G9W3.1|TTCA_HERAR RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|133740249|emb|CAL63300.1| putative ATPase [Herminiimonas arsenicoxydans]
Length = 318
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 86/219 (39%), Gaps = 43/219 (19%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K +Y L + L + A+G M+ DK++V SG S ALL +L M L
Sbjct: 28 KIVYENNKLHKRLCRQVGQAIGDFNMIEDGDKIMVCLSGGKDSYALLDIL---MTLRERA 84
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D +++ N + +Y L+ +N Y+ V
Sbjct: 85 PIKFDIVAVNLD----------QKQPNFPE-----HILPAYLKQLDIPFHIENQDTYSIV 129
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 130 KRLIPEG-----------KTTCSLCSR------LRRGILYRVADELGATKIALGHHRDDI 172
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPL 294
N+ G KG L SDD G I +RPL
Sbjct: 173 METFFLNMFFGAKIKGMPPKLQ---SDD--GKHIVIRPL 206
>gi|15641443|ref|NP_231075.1| C32 tRNA thiolase [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121590934|ref|ZP_01678255.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153817918|ref|ZP_01970585.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153823754|ref|ZP_01976421.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227081604|ref|YP_002810155.1| hypothetical protein VCM66_1388 [Vibrio cholerae M66-2]
gi|229504993|ref|ZP_04394503.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae BX
330286]
gi|229511338|ref|ZP_04400817.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae B33]
gi|229518456|ref|ZP_04407900.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae RC9]
gi|229607996|ref|YP_002878644.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae
MJ-1236]
gi|254848552|ref|ZP_05237902.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255745811|ref|ZP_05419759.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholera CIRS
101]
gi|262158910|ref|ZP_06030022.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae INDRE
91/1]
gi|298498489|ref|ZP_07008296.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|360035327|ref|YP_004937090.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae O1
str. 2010EL-1786]
gi|379741227|ref|YP_005333196.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
IEC224]
gi|417813446|ref|ZP_12460102.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-49A2]
gi|417816310|ref|ZP_12462942.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HCUF01]
gi|418332460|ref|ZP_12943392.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-06A1]
gi|418337201|ref|ZP_12946099.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-23A1]
gi|418344719|ref|ZP_12950501.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-28A1]
gi|418348869|ref|ZP_12953603.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-43A1]
gi|418354645|ref|ZP_12957366.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-61A1]
gi|419825911|ref|ZP_14349415.1| PP-loop family protein [Vibrio cholerae CP1033(6)]
gi|421316444|ref|ZP_15767015.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1032(5)]
gi|421321035|ref|ZP_15771592.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1038(11)]
gi|421325030|ref|ZP_15775556.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1041(14)]
gi|421328690|ref|ZP_15779204.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1042(15)]
gi|421331714|ref|ZP_15782194.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1046(19)]
gi|421335289|ref|ZP_15785755.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1048(21)]
gi|421339179|ref|ZP_15789614.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-20A2]
gi|421346956|ref|ZP_15797338.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-46A1]
gi|422891542|ref|ZP_16933915.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-40A1]
gi|422902749|ref|ZP_16937743.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-48A1]
gi|422906632|ref|ZP_16941456.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-70A1]
gi|422913211|ref|ZP_16947728.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HFU-02]
gi|422925691|ref|ZP_16958714.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-38A1]
gi|423145014|ref|ZP_17132621.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-19A1]
gi|423149689|ref|ZP_17137017.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-21A1]
gi|423153502|ref|ZP_17140696.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-22A1]
gi|423156317|ref|ZP_17143421.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-32A1]
gi|423160141|ref|ZP_17147109.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-33A2]
gi|423164867|ref|ZP_17151618.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-48B2]
gi|423730998|ref|ZP_17704310.1| PP-loop family protein [Vibrio cholerae HC-17A1]
gi|423758153|ref|ZP_17712355.1| PP-loop family protein [Vibrio cholerae HC-50A2]
gi|423892687|ref|ZP_17726367.1| PP-loop family protein [Vibrio cholerae HC-62A1]
gi|423927606|ref|ZP_17730985.1| PP-loop family protein [Vibrio cholerae HC-77A1]
gi|424002334|ref|ZP_17745418.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-17A2]
gi|424006169|ref|ZP_17749147.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-37A1]
gi|424024187|ref|ZP_17763845.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-62B1]
gi|424027036|ref|ZP_17766647.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-69A1]
gi|424586311|ref|ZP_18025898.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1030(3)]
gi|424595013|ref|ZP_18034345.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1040(13)]
gi|424598881|ref|ZP_18038070.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio Cholerae
CP1044(17)]
gi|424601611|ref|ZP_18040763.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1047(20)]
gi|424606609|ref|ZP_18045567.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1050(23)]
gi|424610439|ref|ZP_18049290.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-39A1]
gi|424613246|ref|ZP_18052047.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-41A1]
gi|424617235|ref|ZP_18055919.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-42A1]
gi|424622010|ref|ZP_18060531.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-47A1]
gi|424644981|ref|ZP_18082729.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-56A2]
gi|424652704|ref|ZP_18090138.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-57A2]
gi|424656564|ref|ZP_18093862.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-81A2]
gi|440709685|ref|ZP_20890342.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae 4260B]
gi|443503521|ref|ZP_21070497.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-64A1]
gi|443507420|ref|ZP_21074202.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-65A1]
gi|443511550|ref|ZP_21078202.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-67A1]
gi|443515105|ref|ZP_21081629.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-68A1]
gi|443518898|ref|ZP_21085307.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-71A1]
gi|443523793|ref|ZP_21090016.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-72A2]
gi|443531398|ref|ZP_21097413.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-7A1]
gi|443535180|ref|ZP_21101069.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-80A1]
gi|443538741|ref|ZP_21104596.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-81A1]
gi|449056085|ref|ZP_21734753.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae O1 str.
Inaba G4222]
gi|81544966|sp|Q9KS29.1|TTCA_VIBCH RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|254790148|sp|C3LMC8.1|TTCA_VIBCM RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|9655931|gb|AAF94589.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547209|gb|EAX57334.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|126511545|gb|EAZ74139.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126518723|gb|EAZ75946.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227009492|gb|ACP05704.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229345171|gb|EEO10145.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae RC9]
gi|229351303|gb|EEO16244.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae B33]
gi|229357216|gb|EEO22133.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae BX
330286]
gi|229370651|gb|ACQ61074.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae
MJ-1236]
gi|254844257|gb|EET22671.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255736886|gb|EET92283.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholera CIRS
101]
gi|262029095|gb|EEY47747.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae INDRE
91/1]
gi|297542822|gb|EFH78872.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|340041032|gb|EGR02001.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-49A2]
gi|340042036|gb|EGR03002.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HCUF01]
gi|341623134|gb|EGS48700.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-70A1]
gi|341623171|gb|EGS48736.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-48A1]
gi|341624197|gb|EGS49705.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-40A1]
gi|341639283|gb|EGS63904.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HFU-02]
gi|341647129|gb|EGS71219.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-38A1]
gi|356419019|gb|EHH72589.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-06A1]
gi|356419354|gb|EHH72902.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-21A1]
gi|356424416|gb|EHH77822.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-19A1]
gi|356430603|gb|EHH83809.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-22A1]
gi|356432779|gb|EHH85976.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-23A1]
gi|356435917|gb|EHH89053.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-28A1]
gi|356441717|gb|EHH94605.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-32A1]
gi|356447608|gb|EHI00399.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-43A1]
gi|356448472|gb|EHI01242.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-33A2]
gi|356453047|gb|EHI05710.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-61A1]
gi|356454248|gb|EHI06900.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-48B2]
gi|356646481|gb|AET26536.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae O1
str. 2010EL-1786]
gi|378794737|gb|AFC58208.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
IEC224]
gi|395920700|gb|EJH31522.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1041(14)]
gi|395921401|gb|EJH32221.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1032(5)]
gi|395924017|gb|EJH34828.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1038(11)]
gi|395930196|gb|EJH40945.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1042(15)]
gi|395932978|gb|EJH43721.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1046(19)]
gi|395936243|gb|EJH46971.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1048(21)]
gi|395944127|gb|EJH54801.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-20A2]
gi|395946016|gb|EJH56680.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-46A1]
gi|395960149|gb|EJH70537.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-56A2]
gi|395961256|gb|EJH71595.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-57A2]
gi|395963987|gb|EJH74232.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-42A1]
gi|395971880|gb|EJH81509.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-47A1]
gi|395975255|gb|EJH84750.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1030(3)]
gi|395977256|gb|EJH86674.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1047(20)]
gi|408008107|gb|EKG46124.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-39A1]
gi|408014283|gb|EKG51939.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-41A1]
gi|408033753|gb|EKG70279.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1040(13)]
gi|408043230|gb|EKG79237.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio Cholerae
CP1044(17)]
gi|408044527|gb|EKG80437.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
CP1050(23)]
gi|408055167|gb|EKG90107.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-81A2]
gi|408609992|gb|EKK83368.1| PP-loop family protein [Vibrio cholerae CP1033(6)]
gi|408625140|gb|EKK98060.1| PP-loop family protein [Vibrio cholerae HC-17A1]
gi|408637720|gb|EKL09745.1| PP-loop family protein [Vibrio cholerae HC-50A2]
gi|408655763|gb|EKL26871.1| PP-loop family protein [Vibrio cholerae HC-77A1]
gi|408657249|gb|EKL28335.1| PP-loop family protein [Vibrio cholerae HC-62A1]
gi|408846736|gb|EKL86821.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-37A1]
gi|408847455|gb|EKL87524.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-17A2]
gi|408871201|gb|EKM10445.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-62B1]
gi|408879722|gb|EKM18673.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-69A1]
gi|439975274|gb|ELP51410.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae 4260B]
gi|443432113|gb|ELS74647.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-64A1]
gi|443435952|gb|ELS82077.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-65A1]
gi|443439492|gb|ELS89193.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-67A1]
gi|443443593|gb|ELS96882.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-68A1]
gi|443447449|gb|ELT04092.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-71A1]
gi|443450195|gb|ELT10476.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-72A2]
gi|443458481|gb|ELT25877.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-7A1]
gi|443461643|gb|ELT32705.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-80A1]
gi|443466330|gb|ELT40989.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HC-81A1]
gi|448264421|gb|EMB01659.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae O1 str.
Inaba G4222]
Length = 310
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D Q
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLDIL---MSLQKSAPISFELVAVNLDQ---KQP 83
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
E + ++Y + +E D + D ++P +
Sbjct: 84 GFPEHVLPEYLESLGVEY---------KIVEEDTYAIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P L +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IP--CNLCGSQPNLQRQAVKQ 227
Query: 336 FVTDLQTNFPSTVSTVFRT 354
+ D FP + T+FR
Sbjct: 228 MLNDWDKRFPGRIETMFRA 246
>gi|422922734|ref|ZP_16955911.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
BJG-01]
gi|341644992|gb|EGS69149.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
BJG-01]
Length = 310
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D Q
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLDIL---MSLQKSAPISFELVAVNLDQ---KQP 83
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
E + ++Y + +E D + D ++P +
Sbjct: 84 GFPEHVLPEYLESLGVEY---------KIVEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P L +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IP--CNLCGSQPNLQRQAVKQ 227
Query: 336 FVTDLQTNFPSTVSTVFRT 354
+ D FP + T+FR
Sbjct: 228 MLNDWDKRFPGRIETMFRA 246
>gi|167567472|ref|ZP_02360388.1| PP-loop family protein [Burkholderia oklahomensis EO147]
Length = 331
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 83/219 (37%), Gaps = 43/219 (19%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K+ Y L + L + A+G M+ DKV+V SG S ALL +L ++L
Sbjct: 36 KEAYENNKLFKRLARQVGQAIGDYNMIEHGDKVMVCLSGGKDSYALLDVL---LRLRERA 92
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D Q Y + +N Y+ V
Sbjct: 93 PIDFDIVAVNLD---------------QKQPGFPEHVLPEYLATIGVPFHIENQDTYSIV 137
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L TKI + D+
Sbjct: 138 KRLVPEG-----------KTTCSLCSR------LRRGILYRVAGELGATKIALGHHRDDI 180
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPL 294
++ N+ G KG L SDD G + +RPL
Sbjct: 181 LQTLLLNLFYGGKLKGMPPKLQ---SDD--GRNVVIRPL 214
>gi|262402130|ref|ZP_06078691.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio sp. RC586]
gi|262350912|gb|EEZ00045.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio sp. RC586]
Length = 310
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 111/280 (39%), Gaps = 53/280 (18%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D Q
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLEIL---MSLQKSAPISFELVAVNLDQ---KQP 83
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
E + ++Y + +E D + D ++P +
Sbjct: 84 GFPEHVLPEYLESLGVEY---------KIIEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P L +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMR-AYPI-IP--CNLCGSQPNLQRQAVKM 227
Query: 336 FVTDLQTNFPSTVSTVFRT---------ADKLSLDLTSMN 366
+ D FP + T+FR AD D S+N
Sbjct: 228 MLNDWDKRFPGRIETMFRAMQNVVPSHLADFALFDFKSIN 267
>gi|410083659|ref|XP_003959407.1| hypothetical protein KAFR_0J02080 [Kazachstania africana CBS 2517]
gi|372465998|emb|CCF60272.1| hypothetical protein KAFR_0J02080 [Kazachstania africana CBS 2517]
Length = 467
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 137/344 (39%), Gaps = 49/344 (14%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVL---------- 112
C RC N V R K+ +C C +++++ K R + + R KV+
Sbjct: 6 FCKRCKDKNATVQSR-KEPFCNDCFVKFVSLKQRKRMMGDEYYRDCFKVIYDKDAPNGGV 64
Query: 113 ----VAFSGSHSSMALLHLLQEGM--QLSSHKR---ILFSVCAIYIDDGSISQVS--ISE 161
+ F S +A L +L + Q+S H+ V +Y+DD + +E
Sbjct: 65 SEVALPFDFGTSCIAALDVLTLVLKDQISQHRGKTGFKVHVITVYMDDEQRKTYTDKWNE 124
Query: 162 RKANNAQIATAMKYFDSYFTCLEQALEPDNMKL----YTDVAELPLEQFAKDSE-INKMF 216
A + A MK+F + + L ++ + D ++ ++E + +
Sbjct: 125 LCAFDRFDAELMKHFTFHLLDINAFLNTSELQQIVLDHVDYTAKGIQYNITEAENVKSLL 184
Query: 217 QTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTK-IFTAETQTDLATKIIANISLGKGAHVP 275
+ S+++ L++ + ++++ + + TK I + T LA +II + G+G+ V
Sbjct: 185 SSCPNRSTKEDLIKMIIKHVVKKFTYQHPDTKVILWGHSMTKLADEIIGLVIKGRGSQVA 244
Query: 276 --LDV-GFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKA 332
LD F +D + L L+D E Y I L V A LA +K
Sbjct: 245 RALDAESFDEDYADNFKNLYALKDIFLSETDAYCIITGLESFTVNYKAKDTLLLAKSEKF 304
Query: 333 AES------------------FVTDLQTNFPSTVSTVFRTADKL 358
+S + TD++ + + ++TV RT DKL
Sbjct: 305 DDSKSVMKLPKNMTIDELVRKYFTDIEMEYSNIIATVLRTGDKL 348
>gi|329904336|ref|ZP_08273768.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Oxalobacteraceae
bacterium IMCC9480]
gi|327548028|gb|EGF32764.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Oxalobacteraceae
bacterium IMCC9480]
Length = 315
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 88/219 (40%), Gaps = 39/219 (17%)
Query: 77 RLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSS 136
R K Y L + L + A+G M+ DKV+V SG S ALL +L M L
Sbjct: 22 REKITYENNKLHKRLCRQVGQAIGDFNMIEEGDKVMVCLSGGKDSYALLDIL---MTLRE 78
Query: 137 HKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYT 196
I F + A+ +D +++ N + +Y T L A +N Y+
Sbjct: 79 RAPINFELIAVNLD----------QKQPNFPE-----HILPAYLTDLGVAFHIENQDTYS 123
Query: 197 DVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQT 256
V + E +T +L SR LR+ +L + A +L TKI +
Sbjct: 124 IVKRVIAEG-----------KTTCSLCSR------LRRGILYRVADELGATKIALGHHRD 166
Query: 257 DLATKIIANISL-GKGAHVPLDVGFSDDRTGDIITLRPL 294
D+ N+ GK +P + SDD G I +RPL
Sbjct: 167 DILETFFLNMFFGGKLKSMPPKLQ-SDD--GKHIVIRPL 202
>gi|313887829|ref|ZP_07821509.1| PP-loop family protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846172|gb|EFR33553.1| PP-loop family protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 272
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 38/174 (21%)
Query: 94 KFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 153
KF + +M+ P DK+ VA SG S+ L LLQE L H ++ F + I +D G
Sbjct: 25 KFVKGINNYEMISPGDKIAVAISGGKDSLTLAKLLQE---LKKHNKVPFELEFIAMDPGY 81
Query: 154 ISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNM-KLYTDVAELPLEQFAKDSEI 212
+ P+N +L + +L + DS++
Sbjct: 82 L----------------------------------PENRERLEYNCEKLGIPVKVHDSDV 107
Query: 213 NKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANI 266
+ + +++ S Y+ +R+ L A++L C K+ D+ ++ NI
Sbjct: 108 FSVAEKLSSGGSTCYMCARMRRGNLYNRAQELGCNKLALGHHFDDVIETVLLNI 161
>gi|429329158|gb|AFZ80917.1| hypothetical protein BEWA_003250 [Babesia equi]
Length = 505
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRT--GDIITLRPLRDFSSKEVIYYN 306
+ T ETQ ++ I+ G G + FSD T G +RPL+ SSKEV +Y+
Sbjct: 332 VMTPETQDNICNTILFLTCTGNGGVMACKTAFSDKHTLDGHATLVRPLKSISSKEVAFYH 391
Query: 307 IFNDLS 312
N LS
Sbjct: 392 RLNGLS 397
>gi|288817937|ref|YP_003432284.1| ATPase, PP-loop superfamily [Hydrogenobacter thermophilus TK-6]
gi|384128698|ref|YP_005511311.1| Rhodanese domain-containing protein [Hydrogenobacter thermophilus
TK-6]
gi|288787336|dbj|BAI69083.1| ATPase, PP-loop superfamily [Hydrogenobacter thermophilus TK-6]
gi|308751535|gb|ADO45018.1| Rhodanese domain protein [Hydrogenobacter thermophilus TK-6]
Length = 440
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 64 CPRCNTNNGEVVLRL---KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
C RC N E ++ L + CK C + ++ R + + +M +P ++V VA SG
Sbjct: 31 CSRCKKN--EAIINLAYARQRLCKDCFNDFFVNRVRRVVEEFRMFKPGERVAVAVSGGKD 88
Query: 121 SMALLHLLQEGM 132
S+ALLH L++
Sbjct: 89 SVALLHALKKAF 100
>gi|209881444|ref|XP_002142160.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209557766|gb|EEA07811.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 371
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 151/366 (41%), Gaps = 66/366 (18%)
Query: 67 CNTNNGEVVLRLKDIYCKACLLQYLNHKFRA-----------ALGKSKMMR--PQDKVLV 113
C + ++ +D+ C+ C + ++ + FR L K+ +R P ++
Sbjct: 7 CKCKQSKASIKGRDLMCRQCFINFVENNFRTEMRLGVIEPLKKLHKNSNIRKPPSTELYF 66
Query: 114 AFSGSHSSMALLHLLQEGMQLSSHKRILFSVCA-IYIDDGSISQVSISERKANNAQIATA 172
A ++S LL LL + +S KR +++ + I++D + R N +
Sbjct: 67 AVGFGYTSQTLLSLLT--VTPNSGKRPDYNIKSLIHVDTSCFLDLKCI-RYVNYLE---- 119
Query: 173 MKYFDSYFTCLEQALEPDNMKL-----------------YTDVAELPLE-----QFAKDS 210
K+ + YF E++ P+ + + Y+ + E + +F D
Sbjct: 120 -KFVEKYF---EESKRPEVVVIPFGLSIAKYLTEVTPSNYSSIEECRQKIMMSMKFLLDK 175
Query: 211 E---INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFT-AETQTDLATKIIANI 266
I + +++ R Y+++ R +K+ N K A T +AT+ + +
Sbjct: 176 NTDNIGILMKSIIFSDIRDYIIEEKRT-----ESKECNTGKYLVLASTMDSMATEALHYM 230
Query: 267 SLGKGAHVP-----LDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLAT 321
SL G H LD +S + +II LRPLR+ +EVI Y FN V V ++
Sbjct: 231 SLASGDHSKSIFRQLDTRWSGKQ--EIIILRPLRNLRIREVIIYWHFNPKKLVSVHNMGV 288
Query: 322 -LADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDT 380
++ L++ +F++ Q++ +S +F K LD+ + N C +C L +
Sbjct: 289 QISMKRGQLEREMLNFMSS-QSSKVYNISNIFARLAK-DLDMQNEYSTNYCKICGLYLQS 346
Query: 381 RADLAS 386
L +
Sbjct: 347 SQILCT 352
>gi|218779090|ref|YP_002430408.1| PP-loop domain-containing protein [Desulfatibacillum alkenivorans
AK-01]
gi|218760474|gb|ACL02940.1| PP-loop domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 252
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 105/284 (36%), Gaps = 68/284 (23%)
Query: 91 LNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
LN + A M++ D+V V SG S L+ +L+E + S + + + I+ID
Sbjct: 20 LNRQVGKAQEAYSMIQEGDRVAVGISGGKDSFTLMWILRERL---SRIPVKYHLEGIHID 76
Query: 151 DGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDS 210
G + DS + Q E N +L + + + + ++
Sbjct: 77 PG----------------------FDDSSADEIAQYCESMNYRLRVEKTDFGIRAHSDEN 114
Query: 211 EINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK 270
N F L SR LR+ L + A+++ CTKI + DL + N+
Sbjct: 115 RENPCF-----LCSR------LRRQRLFELAQEMGCTKIALGHHKDDLIETLFMNMCY-- 161
Query: 271 GAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL---- 326
TG+I T++P ++F E+ + L+ ++A A +
Sbjct: 162 --------------TGEIATMKPYQEFFGGEI---TVIRPLAYTDEKNIAYFARAMNMPE 204
Query: 327 ---------ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLD 361
AS ++ + + L P +FR+ ++ D
Sbjct: 205 IENACPTSGASKREEIKQLLEGLYKQNPKIRGNLFRSMSRVKTD 248
>gi|187777244|ref|ZP_02993717.1| hypothetical protein CLOSPO_00796 [Clostridium sporogenes ATCC
15579]
gi|187774172|gb|EDU37974.1| putative tRNA(Ile)-lysidine synthetase [Clostridium sporogenes ATCC
15579]
Length = 240
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 37/170 (21%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+G +++ DK+ V SG S+ALLHLL++ S K F + AI
Sbjct: 1 MQKLLGKLRRAMGDFNLIQNGDKIAVGLSGGKDSIALLHLLKKYQSFSPEK---FDLIAI 57
Query: 148 YIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFA 207
+D + + F+ LE N+ LY + + P+++
Sbjct: 58 TLDTMTGAD-----------------------FSPLESVCSNINVPLY--IYKTPIKEIV 92
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
D V + L LR+ L +KKL C KI + D
Sbjct: 93 FD---------VRKEKNPCSLCANLRRGALNNYSKKLGCNKIALGHHKND 133
>gi|294659301|ref|XP_002770568.1| DEHA2G02728p [Debaryomyces hansenii CBS767]
gi|226711415|sp|B5RV24.1|CTU1_DEBHA RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|199433857|emb|CAR65903.1| DEHA2G02728p [Debaryomyces hansenii CBS767]
Length = 377
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 112/303 (36%), Gaps = 40/303 (13%)
Query: 63 LCPRCNTNNGEVVLRLKDI--YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
LC CN V+ R K++ CK C + + + + +P DKV + SG
Sbjct: 16 LCELCNGRKA-VMKRPKNLQKLCKECFYNVFETEIHNTIADANLFQPGDKVAIGASGGKD 74
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDG--SISQVSISERKANNAQIATAMKYFDS 178
S L +L+ L+ + + ID+G S++ K N AQ A++
Sbjct: 75 STVLASVLK---TLNERYDYRLELVLLSIDEGIKGYRDDSLATVKRNQAQYNMALEIIS- 130
Query: 179 YFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLL 238
Y D+ +++ + I SS Y LR+ L
Sbjct: 131 ----------------YKDLYNWSMDEIVSCAGIR---------SSCTY-CGVLRRQALD 164
Query: 239 QAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL-RPLRDF 297
+ A KL + T D+A ++ N+ G A + TG I +P +
Sbjct: 165 RGAAKLGINHVVTGHNADDMAETVLMNLLRGDTARLEKSCTILTQSTGSPIKRSKPFKYS 224
Query: 298 SSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK 357
KE++ Y + L + + + A P A + A + L+ PS + + + +
Sbjct: 225 YQKEIVLYAHYKKLD--YFSTECSYA-PEA-FRGTARELLKSLEAIRPSCIMDIIYSGEH 280
Query: 358 LSL 360
L+L
Sbjct: 281 LAL 283
>gi|194476912|ref|YP_002049091.1| possible MesJ-like protein [Paulinella chromatophora]
gi|171191919|gb|ACB42881.1| possible MesJ-like protein [Paulinella chromatophora]
Length = 343
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 50/207 (24%)
Query: 96 RAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSIS 155
R L + ++ + +LVA SG SMAL+ LL + KRI +++ G+
Sbjct: 25 RYLLINNSLLPKRSTLLVAISGGQDSMALIKLLNDL------KRIY--KWNLHLWHGN-- 74
Query: 156 QVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKM 215
+ + +I + + S Q L P YTD A+ P AK
Sbjct: 75 ----HRWRLESDKITCELSRWAS------QELLP----FYTDSAQPPPNSEAK------- 113
Query: 216 FQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAH-- 273
+RQ+ ++L+Q A+KLNC KI TA T +D A ++ NI+ G H
Sbjct: 114 --------ARQWRYESLKQ-----LAEKLNCHKIVTAHTGSDRAETLLLNIARGSNRHGI 160
Query: 274 --VPLDVGFSDDRTGDIITLRPLRDFS 298
+P + + + + ++ +RPL +FS
Sbjct: 161 ASLP-HIRYLVN-SNNLSLVRPLLNFS 185
>gi|258623292|ref|ZP_05718298.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Vibrio mimicus
VM573]
gi|262165675|ref|ZP_06033412.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio mimicus VM223]
gi|424809714|ref|ZP_18235087.1| hypothetical protein SX4_3677 [Vibrio mimicus SX-4]
gi|258584424|gb|EEW09167.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Vibrio mimicus
VM573]
gi|262025391|gb|EEY44059.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio mimicus VM223]
gi|342322811|gb|EGU18598.1| hypothetical protein SX4_3677 [Vibrio mimicus SX-4]
Length = 310
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 53/280 (18%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLDIL---MSLKKSAPISFELVAVNLD------- 79
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
+K +Y +S + +E D + D ++P +
Sbjct: 80 ----QKQPGFPAHVLPEYLES-LGVEYKIVEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P + P +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IPCNLCGSQP--NLQRQAVKQ 227
Query: 336 FVTDLQTNFPSTVSTVFRT---------ADKLSLDLTSMN 366
+ D FP + T+FR AD D S+N
Sbjct: 228 MLNDWDKRFPGRIETMFRAMQNVVPSHLADFALFDFKSIN 267
>gi|289577704|ref|YP_003476331.1| PP-loop domain-containing protein [Thermoanaerobacter italicus Ab9]
gi|289527417|gb|ADD01769.1| PP-loop domain protein [Thermoanaerobacter italicus Ab9]
Length = 300
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC V+ R +C C L Y ++ + K++M +KVL SG SMA
Sbjct: 3 CVRCKKKAVIVLRRHNAAFCADCFLHYYKNQVLKNIRKNRMFEKGEKVLAVVSGGKDSMA 62
Query: 124 LLHLL-QEGMQLSSHKRILFSVCAIYIDDG 152
L +L +EG ++V A+YI+ G
Sbjct: 63 LWDILVKEG----------YNVVAMYINLG 82
>gi|68063159|ref|XP_673589.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491549|emb|CAI00377.1| conserved hypothetical protein [Plasmodium berghei]
Length = 405
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 63 LCPRCNTNNGEVVLRL--KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
LC +CN NN +L+ K+ CK C L+ + + K KM DK+ +A SG
Sbjct: 2 LCEQCNKNN-VCILKPSNKEKLCKYCFLESFEDEVHTTILKKKMFEDNDKICIAVSGGKD 60
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 152
S L H+L + ++ LF + ID+G
Sbjct: 61 SSVLTHVLVNIKKKYNYNWNLF---LLAIDEG 89
>gi|217968052|ref|YP_002353558.1| PP-loop domain-containing protein [Dictyoglomus turgidum DSM 6724]
gi|217337151|gb|ACK42944.1| PP-loop domain protein [Dictyoglomus turgidum DSM 6724]
Length = 318
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C+ + R +CK ++Y+ + A+ K KM D++LVA SG S+A
Sbjct: 3 CTKCHNEASIYIRRHNTAFCKEHFIEYIYGQVEKAIKKYKMFEKNDQILVAVSGGKDSLA 62
Query: 124 LLHLL 128
L +L
Sbjct: 63 LWDIL 67
>gi|384424539|ref|YP_005633897.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae
LMA3984-4]
gi|327484092|gb|AEA78499.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio cholerae
LMA3984-4]
Length = 365
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D Q
Sbjct: 30 AIADFNMIDDGDRIMVCLSGGKDSFTMLDIL---MSLQKSAPISFELVAVNLDQ---KQP 83
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
E + ++Y + +E D + D ++P +
Sbjct: 84 GFPEHVLPEYLESLGVEY---------KIIEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P L +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IP--CNLCGSQPNLQRQAVKQ 227
Query: 336 FVTDLQTNFPSTVSTVFRT 354
+ D FP + T+FR
Sbjct: 228 MLNDWDKRFPGRIETMFRA 246
>gi|449144073|ref|ZP_21774891.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio mimicus CAIM
602]
gi|449080397|gb|EMB51313.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio mimicus CAIM
602]
Length = 310
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 53/280 (18%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLDIL---MSLQKSAPISFELVAVNLD------- 79
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
+K +Y +S + +E D + D ++P +
Sbjct: 80 ----QKQPGFPAHVLPEYLES-LGVEYKIVEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P + P +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IPCNLCGSQP--NLQRQAVKQ 227
Query: 336 FVTDLQTNFPSTVSTVFRT---------ADKLSLDLTSMN 366
+ D FP + T+FR AD D S+N
Sbjct: 228 MLNDWDKRFPGRIETMFRAMQNVVPSHLADFALFDFKSIN 267
>gi|238585328|ref|XP_002390834.1| hypothetical protein MPER_09827 [Moniliophthora perniciosa FA553]
gi|215454727|gb|EEB91764.1| hypothetical protein MPER_09827 [Moniliophthora perniciosa FA553]
Length = 147
Score = 43.5 bits (101), Expect = 0.28, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALG----------KSKMMRPQDKV 111
K+C RC N G +V+R +YCKAC L K + +L + K ++ +
Sbjct: 26 KVCVRCKVNTGNIVIR-HAVYCKACFPTMLTTKVKRSLDPHINEAPDVPRRKALKASGNL 84
Query: 112 LVAFSGSHSSMALLHLL 128
LV FSG S L L+
Sbjct: 85 LVGFSGGLGSTVALDLI 101
>gi|342319065|gb|EGU11017.1| Hypothetical Protein RTG_03237 [Rhodotorula glutinis ATCC 204091]
Length = 612
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 228 LLQTLRQNLLLQAAKKLNCTK--IFTAETQTDLATKIIANISLGKGAHVPLDVG-----F 280
L LR +L+L + + + + ++ T A ++ +SLG+G + + G
Sbjct: 260 LRTALRSSLILSHVRHSSSSTAVLLLGDSGTRSAITTLSGMSLGRGFSIGEESGAEYLAV 319
Query: 281 SDDRT----------GDIITLRPLRDFSSKEVIYYNIFNDLSPVHVP--SLATLADPLAS 328
S D G+++ +RPL + EV +Y L + S A + +
Sbjct: 320 SRDEAVTADGQKSSAGEVLVVRPLVHATLGEVEHYCNLMGLETLWAQKRSAAEESAKKKT 379
Query: 329 LQKAAESFVTDLQTNFPSTVSTVFRTADKLSL 360
+Q E F+ L++ FPSTVSTV RT+ KL L
Sbjct: 380 IQGLVEDFILSLESTFPSTVSTVTRTSHKLGL 411
>gi|262171527|ref|ZP_06039205.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio mimicus MB-451]
gi|261892603|gb|EEY38589.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio mimicus MB-451]
Length = 310
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 57/282 (20%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLDIL---MSLKKSAPISFELVAVNLD------- 79
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
+K +Y +S + +E D + D ++P +
Sbjct: 80 ----QKQPGFPAHVLPEYLES-LGVEYKIVEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG---KGAHV 274
T L SR LR+ +L + AK+L TKI + D+ + N+ G KG
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKIKGMPP 174
Query: 275 PLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AA 333
L SD+ G+ + +RPL K++I Y+ P+ +P + P +LQ+ A
Sbjct: 175 KL---VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IPCNLCGSQP--NLQRQAV 225
Query: 334 ESFVTDLQTNFPSTVSTVFRT---------ADKLSLDLTSMN 366
+ + D FP + T+FR AD D S+N
Sbjct: 226 KQMLNDWDKRFPGRIETMFRAMQNVVPSHLADFALFDFKSIN 267
>gi|422910537|ref|ZP_16945172.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE-09]
gi|341633325|gb|EGS58146.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Vibrio cholerae
HE-09]
Length = 310
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 106/259 (40%), Gaps = 44/259 (16%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D Q
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLDIL---MSLQKSAPISFELVAVNLDQ---KQP 83
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
E + ++Y + +E D + D ++P +
Sbjct: 84 GFPEHVLPEYLESLGVEY---------KIVEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y+ P+ +P + P +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYSDMRGY-PI-IPCNLCGSQP--NLQRQAVKL 227
Query: 336 FVTDLQTNFPSTVSTVFRT 354
+ D FP + T+FR
Sbjct: 228 MLNDWDKRFPGRIETMFRA 246
>gi|333911645|ref|YP_004485378.1| tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
[Methanotorris igneus Kol 5]
gi|333752234|gb|AEF97313.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Methanotorris igneus Kol 5]
Length = 303
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 66 RCNTNNGEVVLRLKD---IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
+C GE +++K CK ++Y K + + K KM+ P+DKVL+A SG
Sbjct: 2 KCKICKGEAYIKIKYPKMALCKEHFIEYFEKKVQKTIKKYKMIDPEDKVLIAISGGKDGA 61
Query: 123 ALLHLLQE 130
+ ++L++
Sbjct: 62 VVTYVLKK 69
>gi|152981386|ref|YP_001355128.1| C32 tRNA thiolase [Janthinobacterium sp. Marseille]
gi|205830597|sp|A6T3N1.1|TTCA_JANMA RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|151281463|gb|ABR89873.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 317
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 105/278 (37%), Gaps = 48/278 (17%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK 138
K +Y L + L + A+G M+ DKV+V SG S ALL +L M L
Sbjct: 26 KIVYENNKLHKRLCRQVGQAIGDFNMIEDGDKVMVCLSGGKDSYALLDIL---MTLRERA 82
Query: 139 RILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDV 198
I F + A+ +D +++ N +Y L+ +N Y+ V
Sbjct: 83 PIKFDIVAVNLD----------QKQPNFPD-----HILPAYLKQLDIPFHIENQDTYSIV 127
Query: 199 AELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDL 258
L E +T +L SR LR+ +L + A +L KI + D+
Sbjct: 128 KRLIPEG-----------KTTCSLCSR------LRRGILYRVADELGANKIALGHHRDDI 170
Query: 259 ATKIIANISLG---KGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
N+ G KG L SDD G I +RPL + Y + P+
Sbjct: 171 METFFLNMFFGAKIKGMPPKLQ---SDD--GKHIVIRPLAYVKEADTERYAEVKNF-PI- 223
Query: 316 VPSLATLADPLASLQ-KAAESFVTDLQTNFPSTVSTVF 352
+P L +LQ K + + + + FP V +F
Sbjct: 224 IP--CDLCGSQENLQRKQIKGMLREWEKKFPGRVDNIF 259
>gi|68068861|ref|XP_676341.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495996|emb|CAH94645.1| conserved hypothetical protein [Plasmodium berghei]
Length = 519
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 193 KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQ-----YLLQTLRQNLLLQAAKKLNCT 247
K+Y V L F K+ K Q+ + + + Y+ + + N +L+ K
Sbjct: 254 KIYFTV--LKSNYFIKEKYQGKFLQSYDVVKTEENYYLNYINELIIYNNILKYCKDEKIN 311
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
+ +++ K +G G ++PL + D+R II ++PL+D KE+ Y+
Sbjct: 312 YVLWGNNANNISNKSFLYTIIGNGINIPLCTSYIDNRYEPIIFIKPLKDLLDKEIYIYSF 371
Query: 308 FNDLSPVH 315
+ D+ +
Sbjct: 372 YKDIKYAY 379
>gi|340785573|ref|YP_004751038.1| tRNA(cytosine32)-2-thiocytidine synthetase [Collimonas fungivorans
Ter331]
gi|340550840|gb|AEK60215.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Collimonas fungivorans
Ter331]
Length = 325
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 100/257 (38%), Gaps = 44/257 (17%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+G M+ DKV+V SG S ALL +L M L I F + A+ +D
Sbjct: 54 AIGDFNMIEDGDKVMVCLSGGKDSYALLDIL---MTLRERAPINFEIVAVNLD------- 103
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
+++ N +Y L A +N Y+ V L E +
Sbjct: 104 ---QKQPNFPD-----HILPAYLEKLGVAYHIENQDTYSIVKRLIPEG-----------K 144
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISL-GKGAHVPL 276
T +L SR LR+ +L + A +L TK+ + D+ N+ GK +P
Sbjct: 145 TTCSLCSR------LRRGILYRVATELGATKVALGHHRDDIMETFFLNMFFGGKLKSMPA 198
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQ-KAAES 335
+ SDD G I +RPL ++ Y P+ +P L +LQ K +
Sbjct: 199 KLQ-SDD--GKQIVIRPLAYVKEADLSRYAEVKQF-PI-IP--CDLCGSQENLQRKQIKG 251
Query: 336 FVTDLQTNFPSTVSTVF 352
+ + + FP V +F
Sbjct: 252 MLREWEKKFPGRVENIF 268
>gi|328724233|ref|XP_001952568.2| PREDICTED: hypothetical protein LOC100161816 [Acyrthosiphon pisum]
Length = 1181
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 153
A+ + KM+R D+++V SG S++LLH L + +S K I F++ A +D GS
Sbjct: 927 AIREFKMIRDGDRIMVCLSGGKDSLSLLHTLHQYQYYASSKGIHFTLGAATVDPGS 982
>gi|374635475|ref|ZP_09707073.1| hypothetical protein MetfoDRAFT_0454 [Methanotorris formicicus
Mc-S-70]
gi|373562125|gb|EHP88343.1| hypothetical protein MetfoDRAFT_0454 [Methanotorris formicicus
Mc-S-70]
Length = 302
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 66 RCNTNNGEVVLRLKD---IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
+C GEV + +K CK ++Y + + + K +M++P+DKVL+A SG
Sbjct: 2 KCKICKGEVYITIKYPKMALCKEHFIEYFEKRVKKTIKKYEMIKPEDKVLIAISGGKDGA 61
Query: 123 ALLHLLQE 130
+ ++L++
Sbjct: 62 VVTYVLKK 69
>gi|426199407|gb|EKV49332.1| hypothetical protein AGABI2DRAFT_65827 [Agaricus bisporus var.
bisporus H97]
Length = 474
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 282 DDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQ 341
DD + +RPL D KE ++ + V ++ + +L + F L+
Sbjct: 273 DDIEQTVRVIRPLCDVGMKECAFWAWWCGFKVVGKHRYSSGRQDIGALTR---DFSMGLE 329
Query: 342 TNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAP 377
++PSTVST+ RT +KL+ T + + CL+C+ P
Sbjct: 330 KDYPSTVSTIARTCNKLT---TKGDTSMKCLICQRP 362
>gi|21228898|ref|NP_634820.1| hypothetical protein MM_2796 [Methanosarcina mazei Go1]
gi|452211286|ref|YP_007491400.1| n-type ATP pyrophosphatase superfamily / TilS and TtcA -like
protein [Methanosarcina mazei Tuc01]
gi|20907428|gb|AAM32492.1| conserved protein [Methanosarcina mazei Go1]
gi|452101188|gb|AGF98128.1| n-type ATP pyrophosphatase superfamily / TilS and TtcA -like
protein [Methanosarcina mazei Tuc01]
Length = 302
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 117/301 (38%), Gaps = 46/301 (15%)
Query: 64 CPRCNTNNGEVVLRLKDIY-CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +CN ++ + + ++ CK ++ + K + + + ++ D + VA SG S
Sbjct: 5 CKKCN-HDAIIFQKYSGMHLCKRHFIEDVERKIKLTVRRDYSIKKNDVIAVALSGGKDSS 63
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
L+++ + + R + AI +D+G S A A +++
Sbjct: 64 VALYIMHKILG----DRPDIQIVAISVDEGIHGYRPQSLELAKQLTEALGVRHI------ 113
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAK 242
+K + D E A E+ M + T S LR+++L + A
Sbjct: 114 ---------IKSFKD------EHGATMDELAVMDREKGTCS----YCGVLRKSILNRVAI 154
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHV-----PLDVGFSDDRTGDIITLRPLRDF 297
++ TK+ T D A I+ N G + P+ V G ++ +PLR+
Sbjct: 155 EIGATKLVTGHNLDDEAQTILLNHFRGDMERMVRLAPPVAV------EGLVMRAKPLRNI 208
Query: 298 SSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK 357
KEV Y + N L PV + +L+ + +TN P T ++ R DK
Sbjct: 209 PEKEVALYALVNSL-PVDFSECPYAGE---ALRGEIRELLNGFETNHPGTKYSLLRGFDK 264
Query: 358 L 358
L
Sbjct: 265 L 265
>gi|170755404|ref|YP_001779793.1| hypothetical protein CLD_0620 [Clostridium botulinum B1 str. Okra]
gi|429247119|ref|ZP_19210395.1| hypothetical protein CFSAN001628_019199 [Clostridium botulinum
CFSAN001628]
gi|169120616|gb|ACA44452.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
gi|428755972|gb|EKX78567.1| hypothetical protein CFSAN001628_019199 [Clostridium botulinum
CFSAN001628]
Length = 240
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L KFR A+G +++ DK+ V SG S+ LLHLL++ S K F + AI
Sbjct: 1 MQKLLGKFRRAVGDFNLIQNGDKIAVGLSGGKDSVVLLHLLKKYQSFSPEK---FDLIAI 57
Query: 148 YIDDGSISQVSISERKANNAQI 169
+D + + S E +N +
Sbjct: 58 TLDTMTGADFSPLENVCSNINV 79
>gi|403224279|dbj|BAM42409.1| conserved hypothetical protein [Theileria orientalis strain
Shintoku]
Length = 493
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 249 IFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD-IITLRPLRDFSSKEVIYYNI 307
+ + +T D+ + + LG G V F D + + + LRPL+ FS KEV +Y+
Sbjct: 320 LLSGDTMDDICRQTVYLTCLGLGEQVSYRSAFVDTESLEGVKILRPLKTFSDKEVAFYHR 379
Query: 308 FNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
N LS V + T AS+ F ++ T + + + + ++L
Sbjct: 380 INKLS--QVEKMYTSPKSRASILGCINLFTEEISTRSSTGLHNIIKVTNRL 428
>gi|73670143|ref|YP_306158.1| hypothetical protein Mbar_A2672 [Methanosarcina barkeri str.
Fusaro]
gi|72397305|gb|AAZ71578.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 302
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 112/282 (39%), Gaps = 36/282 (12%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK ++ + K + + K +R D + VA SG S L+++ + + R
Sbjct: 24 CKKHFVEDVERKIKLTIRKEYSIRKNDMIAVALSGGKDSSVALYIVHKILG----NRPDI 79
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
+ AI +D+G I+ + ++ ++A ++ + K + +V +
Sbjct: 80 EIVAISVDEG------INGYRPHSLEVAKSLTKMLGVRHII---------KSFKEVHGVT 124
Query: 203 LEQFAK-DSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATK 261
+++ A D E LR+N+L + A ++ TK+ T D A
Sbjct: 125 MDELAAMDRE-----------KGACSYCGVLRKNILNRTALEIGATKLVTGHNLDDEAQT 173
Query: 262 IIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLAT 321
I+ N G + + + G ++ +PLR+ KEV Y + N L PV
Sbjct: 174 ILLNHLRGDVERM-VRLAPPAAIEGLVLRAKPLRNIPEKEVALYALVNSL-PVDFSECPY 231
Query: 322 LADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLT 363
+ +L+ + + + P T ++ R DKL+ LT
Sbjct: 232 AGE---ALRGEIRELLNNFEAKHPGTKYSLLRGFDKLTGVLT 270
>gi|156088091|ref|XP_001611452.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798706|gb|EDO07884.1| conserved hypothetical protein [Babesia bovis]
Length = 410
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 138/346 (39%), Gaps = 59/346 (17%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDK---VLVAFSGSH 119
LC RC + R K I C +C L+ KF + L +S +R +K +++ G
Sbjct: 38 LCYRCGILPATLFTR-KAI-CNSCFLEVFRRKFASNL-RSHFVRKNEKKEPIIILMGGDV 94
Query: 120 SSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKA------------NNA 167
S +LL+L+ E +KR + + D + + + +S+ A +N
Sbjct: 95 FSTSLLNLILE-----RNKRRYVTAAHVPADSDTSNHLFVSDDMALNYVLSIDNYVDDNV 149
Query: 168 QIATAMKYFDSYFTCLEQALEPDNMKL---------------------YTDVAELPLEQF 206
A+ + F + T + L +++L Y + E+
Sbjct: 150 GFASRSEQFFHHVTNVVNTLGNSSVELQKIKQTDHVNEWMILGQVTVSYIALCYFYHEED 209
Query: 207 AK-DSEINKMFQTVTTLSSRQY---------LLQTLRQNLL-LQAAKKLNCTKIFTAETQ 255
+K D ++ + +TT+ + + LLQT+ NLL L+ +F ++TQ
Sbjct: 210 SKCDHRCYELKEHMTTMYNSLHCDELAYSLTLLQTV--NLLRYMKNHNLSTVSVFVSDTQ 267
Query: 256 TDLATKIIANISLGKGAHVPLDVGFSD-DRTGDI-ITLRPLRDFSSKEVIYYNIFNDLSP 313
+ +++ + G V +D + GD + R L+ FSSKEV Y+ N L
Sbjct: 268 ELIVRRVLMLTCIAAGGMVAFKGSMTDANSLGDNNVIYRLLKTFSSKEVALYHRLNGLPH 327
Query: 314 VHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
L + P +++ VT + + ST+ V +KL+
Sbjct: 328 TSSMDLFWHSSPQSTILGCVNELVTSIASAHSSTLHNVCNVVEKLT 373
>gi|70946522|ref|XP_742967.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56522234|emb|CAH80335.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 142
Score = 43.1 bits (100), Expect = 0.38, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 63 LCPRCNTNNGEVVLRL--KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
LC +CN NN +LR K+ CK C L+ + + K KM DK+ +A SG
Sbjct: 2 LCEQCNKNN-VCMLRPSNKEKLCKYCFLESFEDEVHTTILKKKMFEDNDKICIAVSGGKD 60
Query: 121 SMALLHLL 128
S L H+L
Sbjct: 61 SSVLTHVL 68
>gi|17540090|ref|NP_499865.1| Protein TUT-1 [Caenorhabditis elegans]
gi|74960582|sp|O76365.1|CTU1_CAEEL RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Thiolation of uridine in tRNA protein 1
gi|373253825|emb|CCD62179.1| Protein TUT-1 [Caenorhabditis elegans]
Length = 373
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL 291
R+ L + A K+ TK+ T D+A ++ N+ G A + GD+
Sbjct: 153 FRRQALDRGAFKIGATKLVTGHNADDMAETLLMNVLRGDIARLERCTNIVTGEEGDLPRA 212
Query: 292 RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTV 351
+PL+ ++++ Y N L + + P A + A +V DL+ P + +
Sbjct: 213 KPLKYCFERDIVMYARTNQLEYFYTECIYA---PNA-YRGYARKYVRDLEKVHPRAILDL 268
Query: 352 FRTADKLS----LDLTSMNVNNTC------LLCKAPL 378
R+ +K+S +++ ++ + C LCKA L
Sbjct: 269 IRSGEKVSVKKEVEMPTLKICERCGYMTSQKLCKACL 305
>gi|328950002|ref|YP_004367337.1| PP-loop domain-containing protein [Marinithermus hydrothermalis DSM
14884]
gi|328450326|gb|AEB11227.1| PP-loop domain protein [Marinithermus hydrothermalis DSM 14884]
Length = 328
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 64 CPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C T N +V LR + C A L++ + A+ + KM+R D+VLVA SG S+
Sbjct: 3 CRKC-TQNAQVELRRHGLALCAAHYLEWFEAQTARAIRRHKMIREGDRVLVAISGGKDSL 61
Query: 123 ALLHLL 128
AL +L
Sbjct: 62 ALWEVL 67
>gi|268552227|ref|XP_002634096.1| Hypothetical protein CBG01646 [Caenorhabditis briggsae]
gi|226711413|sp|A8WR63.1|CTU1_CAEBR RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1; AltName:
Full=Thiolation of uridine in tRNA protein 1
Length = 372
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL 291
R+ L + A K+ TK+ T D+A ++ N+ G A + GD+
Sbjct: 153 FRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLERCTNIVTGEEGDLPRA 212
Query: 292 RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTV 351
+PL+ ++++ Y N L + + P A + A +V DL+ P + +
Sbjct: 213 KPLKYCFERDIVMYARSNQLEYFYTECIYA---PNA-YRGYARKYVRDLEKVHPRAILDL 268
Query: 352 FRTADKLSLDL-TSMNVNNTCLLC 374
R+ +K+S+ M TC C
Sbjct: 269 IRSGEKVSVKKEVEMPTLKTCERC 292
>gi|340379669|ref|XP_003388349.1| PREDICTED: hypothetical protein LOC100635741 [Amphimedon
queenslandica]
Length = 873
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 153
AL + M+R D+VLV SG S++LLH L + ++ K ILFS+ A+ +D S
Sbjct: 634 ALQEYDMIRDGDRVLVCLSGGKDSLSLLHTLNQYQFIAKSKGILFSLGAVTVDPKS 689
>gi|88606751|ref|YP_505718.1| tRNA(Ile)-lysidine synthetase [Anaplasma phagocytophilum HZ]
gi|88597814|gb|ABD43284.1| tRNA(Ile)-lysidine synthetase [Anaplasma phagocytophilum HZ]
Length = 447
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 226 QYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR- 284
Q + + +R LLLQ N + TA T+ D A ++ + G G +D G + R
Sbjct: 85 QVVARNIRYQLLLQWCSAHNVKVLLTAHTKNDQAETVLIRLERGSG----ID-GLAGIRE 139
Query: 285 ---TGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPS 318
GD+ +RPL DF+ +E+ Y I + + PS
Sbjct: 140 RSVIGDVTIIRPLLDFTRREIQEYAIQHQQPWIEDPS 176
>gi|188585053|ref|YP_001916598.1| PP-loop domain-containing protein [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349740|gb|ACB84010.1| PP-loop domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 313
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C++ + R K C+ L+++L ++ A+ K KM+ P +KV+VA SG S+A
Sbjct: 3 CFKCDSQAILRIKRHKATLCETHLVEHLQNQMIKAIKKFKMLPPNEKVIVAISGGKDSLA 62
Query: 124 LLHLL 128
L +L
Sbjct: 63 LWDML 67
>gi|308492041|ref|XP_003108211.1| CRE-TUT-1 protein [Caenorhabditis remanei]
gi|308249059|gb|EFO93011.1| CRE-TUT-1 protein [Caenorhabditis remanei]
Length = 390
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL 291
R+ L + A K+ TK+ T D+A ++ N+ G A + GD+
Sbjct: 172 FRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLERCTNIVTGEEGDLPRA 231
Query: 292 RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTV 351
+PL+ ++++ Y N L + + P A + A +V DL+ P + +
Sbjct: 232 KPLKYCFERDIVMYARTNQLEYFYTECIYA---PNA-YRGYARKYVRDLEKVHPRAILDL 287
Query: 352 FRTADKLSLDL-TSMNVNNTCLLC 374
R+ +K+S+ M TC C
Sbjct: 288 IRSGEKVSVKKEVEMPTLKTCERC 311
>gi|83316075|ref|XP_731068.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490990|gb|EAA22633.1| Uncharacterized protein family UPF0021 [Plasmodium yoelii yoelii]
Length = 418
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 63 LCPRCNTNNGEVVLRLK----DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGS 118
LC +CN NN V LK + CK C L+ + + K KM DK+ +A SG
Sbjct: 2 LCEQCNKNN---VCMLKPSNKEKLCKHCFLESFEDEVHTTILKKKMFEDNDKICIAVSGG 58
Query: 119 HSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDG 152
S L H+L + ++ LF + ID+G
Sbjct: 59 KDSSVLTHVLVNIKKKYNYNWNLF---LLAIDEG 89
>gi|399021062|ref|ZP_10723181.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Herbaspirillum sp. CF444]
gi|398093046|gb|EJL83436.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Herbaspirillum sp. CF444]
Length = 327
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 96/259 (37%), Gaps = 48/259 (18%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+G M+ DK++V SG S ALL +L + L I F + A+ +D
Sbjct: 55 AIGDYNMIEDGDKIMVCLSGGKDSYALLDIL---LTLRERAPIHFDIIAVNLD------- 104
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
Q +Y L A +N Y+ V + E +
Sbjct: 105 --------QKQPNFPADVLPAYLEKLGVAYHIENQDTYSIVKRVVPEG-----------K 145
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG---KGAHV 274
T L SR LR+ +L + A +L TKI + D+ N+ G KG
Sbjct: 146 TTCALCSR------LRRGILYRVATELGATKIALGHHRDDILETFFLNMFFGGKLKGMPP 199
Query: 275 PLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQ-KAA 333
L SDD G I +RPL ++ Y + P+ +P L +LQ K
Sbjct: 200 KLQ---SDD--GKQIVIRPLAYVKEADLTRYAEVKEF-PI-IP--CDLCGSQENLQRKQI 250
Query: 334 ESFVTDLQTNFPSTVSTVF 352
+ + + + FP V +F
Sbjct: 251 KGLMREWEKKFPGRVDNIF 269
>gi|224372386|ref|YP_002606758.1| PP-loop family protein [Nautilia profundicola AmH]
gi|223589891|gb|ACM93627.1| PP-loop family protein [Nautilia profundicola AmH]
Length = 259
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 78 LKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSH 137
+KDIY +++++ A G+ ++++ D+V+VAFSG S +LH+L+ MQL +
Sbjct: 5 IKDIYFSKKVIKFVGR----ANGEFELIKEGDRVMVAFSGGKDSFVMLHVLKR-MQLIAP 59
Query: 138 KRILFSVCAIYIDDGS 153
+ F + A+ ID G+
Sbjct: 60 FK--FDLLAVTIDAGT 73
>gi|251781032|ref|ZP_04823952.1| ExsB family protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243085347|gb|EES51237.1| ExsB family protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 239
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 68/180 (37%), Gaps = 38/180 (21%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+ M++ DK+ V SG S+ LLHLL + S K F + AI
Sbjct: 1 MQKLLSKMRQAINDFDMIQDGDKIAVGLSGGKDSLTLLHLLNTYKKFSPQK---FELIAI 57
Query: 148 YIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFA 207
++ G + DN LYT L + +
Sbjct: 58 TLNPGGV-----------------------------------DNSPLYTLCENLEVPFYE 82
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
++I K+ + + L LR+ L +A+ L C K+ + D ++ ++S
Sbjct: 83 IQTDIKKIVFDLRKEKNPCSLCANLRRGALHHSAENLGCNKVALGHHKDDALETLMLSMS 142
>gi|188589311|ref|YP_001921417.1| ExsB family protein [Clostridium botulinum E3 str. Alaska E43]
gi|188499592|gb|ACD52728.1| ExsB family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 239
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 68/180 (37%), Gaps = 38/180 (21%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+ M++ DK+ V SG S+ LLHLL + S K F + AI
Sbjct: 1 MQKLLSKMRQAINDFDMIQDGDKIAVGLSGGKDSLTLLHLLNTYKKFSPQK---FELIAI 57
Query: 148 YIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFA 207
++ G + DN LYT L + +
Sbjct: 58 TLNPGGV-----------------------------------DNSPLYTLCENLEVPFYE 82
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
++I K+ + + L LR+ L +A+ L C K+ + D ++ ++S
Sbjct: 83 IQTDIKKIVFDLRKEKNPCSLCANLRRGALHHSAENLGCNKVALGHHKDDALETLMLSMS 142
>gi|448329268|ref|ZP_21518569.1| PP-loop domain protein [Natrinema versiforme JCM 10478]
gi|445614455|gb|ELY68131.1| PP-loop domain protein [Natrinema versiforme JCM 10478]
Length = 319
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 15/138 (10%)
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK----GAHVPLDVGFSDDRTG 286
R++LL + A +L + T D A + NI G H +G DR
Sbjct: 148 VFRRDLLSEYADELEADLLLTGHNLDDEAQTALMNILEGDVEQMAKHFDASLGSLSDREE 207
Query: 287 D---IITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAE--SFVTDLQ 341
+ +PLRD KE+ Y NDL P H+ P AS E + DL+
Sbjct: 208 QDEFVPRAKPLRDVPEKEIALYAHINDL-PAHITEC-----PHASEAYRGEIQQLLYDLE 261
Query: 342 TNFPSTVSTVFRTADKLS 359
N P T ++ ++L+
Sbjct: 262 ENHPGTRHSILSGYEELA 279
>gi|427399700|ref|ZP_18890938.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Massilia timonae
CCUG 45783]
gi|425721462|gb|EKU84375.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Massilia timonae
CCUG 45783]
Length = 315
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 76/200 (38%), Gaps = 43/200 (21%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+G M+ DKV+V SG S ALL +L + L I F + A+ +D
Sbjct: 47 AIGDFNMIEDGDKVMVCLSGGKDSYALLDIL---LTLRERAPIHFDIVAVNLD------- 96
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
+K N Y D L +N Y+ V L E +
Sbjct: 97 ----QKQPNFPAHVLPAYLDK----LGVPYHIENQDTYSIVKRLVPEG-----------K 137
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG---KGAHV 274
T +L SR LR+ +L + A +L C KI + D+ N+ G KG
Sbjct: 138 TTCSLCSR------LRRGILYRVADELGCNKIALGHHRDDILETFFLNMFFGGKLKGMPA 191
Query: 275 PLDVGFSDDRTGDIITLRPL 294
L SDD G + +RP+
Sbjct: 192 KL---VSDD--GKHMVIRPM 206
>gi|67478820|ref|XP_654792.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56471867|gb|EAL49406.1| hypothetical protein EHI_166980 [Entamoeba histolytica HM-1:IMSS]
gi|449707610|gb|EMD47245.1| Hypothetical protein EHI5A_047230 [Entamoeba histolytica KU27]
Length = 272
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 259 ATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPS 318
A +I+A + G VP +G + D+I RP+ DF+ KEV+ Y ++D P +
Sbjct: 136 AGRILAAVIEGDVKMVP-SIGKYEYYYKDLIVSRPV-DFTEKEVLEYLNYSDKIPRSLNE 193
Query: 319 LATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAP 377
+L+ A+ FV DL+ F T +T+ TA K+ + N C C P
Sbjct: 194 ---------TLEMRAQQFVDDLEIEFDQTPNTIISTAQKIE----EGSNNFQCRYCLKP 239
>gi|389639064|ref|XP_003717165.1| hypothetical protein MGG_06404 [Magnaporthe oryzae 70-15]
gi|351642984|gb|EHA50846.1| hypothetical protein MGG_06404 [Magnaporthe oryzae 70-15]
gi|440475731|gb|ELQ44394.1| hypothetical protein OOU_Y34scaffold00088g34 [Magnaporthe oryzae
Y34]
gi|440486443|gb|ELQ66306.1| hypothetical protein OOW_P131scaffold00402g7 [Magnaporthe oryzae
P131]
Length = 398
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 27/219 (12%)
Query: 197 DVAELPL--EQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAET 254
D A LP E + ++ +F + + +S L + +++L+ A + C + +
Sbjct: 161 DWAALPTLKEGCRPEEQLRHLFDNLPSATSAADLTRLFVRHVLMAEAVREACCALLLGNS 220
Query: 255 QTDLATKIIANISLGK----------GAHVPLDVGFSDDRTGDIITLRPL-----RDFSS 299
T LA ++ + G+ GAH D +R + + + L R+
Sbjct: 221 TTSLAALTLSETAKGRAFSLPWLINDGAHSITDYSVGPERAEETGSHKMLVYFLVRELYR 280
Query: 300 KEVIYYNIFNDLSPVHVPSLATLADPLAS-----LQKAAESFVTDLQTNFPSTVSTVFRT 354
E+ Y + + + A+P+ S + + +++ NFPS V+ V RT
Sbjct: 281 NELTTYTELAGMDTSLIIEDTSAANPIISHKHQTIDDVMTRYFREVEENFPSVVANVVRT 340
Query: 355 ADKLSLDLTSMNVNNTCLLCKAPLD-TRADLASSSMGAT 392
KLS D S C LC +D T + + MG T
Sbjct: 341 TAKLSRDEPS----ERCGLCGVAIDATGNERWAGEMGDT 375
>gi|219666213|ref|YP_002456648.1| tRNA(Ile)-lysidine synthetase [Desulfitobacterium hafniense DCB-2]
gi|219536473|gb|ACL18212.1| tRNA(Ile)-lysidine synthetase [Desulfitobacterium hafniense DCB-2]
Length = 472
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 107/262 (40%), Gaps = 47/262 (17%)
Query: 103 KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIY--IDDGSISQVSIS 160
+++ P ++L A SG S+AL H+L +Q ++I + ++ + + S + +
Sbjct: 12 QLIAPGSRILAAVSGGPDSVALAHILWRYIQDKQEQKITLVITHVHHGVREESDDEEKMV 71
Query: 161 ERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVT 220
+ A + +I + FDS + +AK + K FQT
Sbjct: 72 QNMARDWEIPCLIHRFDS-------------------------KNYAKS--VGKSFQT-- 102
Query: 221 TLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF 280
++R++ ++++ +K NCT + TA D A ++ + G G G
Sbjct: 103 --AAREWRYACWQEDM-----RKENCTLLATAHHLGDQAETVLYRLLRGSGT-----AGL 150
Query: 281 SDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDL 340
+ +RPL + ++++ Y N+ P + + +P+ K + +L
Sbjct: 151 AGIYPQKGKLIRPLLTVTKEDILEY-CRNEKLPYALDH--SNEEPIYVRNKIRLQLLPEL 207
Query: 341 QTNF-PSTVSTVFRTADKLSLD 361
Q + P + + RTA+ L D
Sbjct: 208 QREYNPKIIEALGRTAEVLRWD 229
>gi|429962914|gb|ELA42458.1| TIGR00269 family protein [Vittaforma corneae ATCC 50505]
Length = 321
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 130/357 (36%), Gaps = 52/357 (14%)
Query: 63 LCPRCNTNNGEVVLRLKD--IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
+C CN V+LR K CK C + ++ + +S M +V + SG
Sbjct: 2 VCEYCNVAKA-VILRSKSRKKVCKECFYEQFENEIHQLVVESAMFEKNSRVGIGISGGKD 60
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYF 180
S L ++L + ++ L +C +D+G +S K+
Sbjct: 61 STVLAYVLNKLNIKYNYGLDLVLLC---VDEG----ISGYRDKS---------------- 97
Query: 181 TCLEQALEPD---NMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLL 237
+E LE NMKL T V+ + D + K T R+ L
Sbjct: 98 --IETVLENQKILNMKLET-VSYKEMFGMTMDEVVQK-----TGRKGNCTYCGVFRRQAL 149
Query: 238 LQAAKKLNCTKIFTAETQTDLATKIIANISLG------KGAHVPLDVGFSDDRTGDIITL 291
+AA++L I T D+A ++ N G + A SD+ T ++L
Sbjct: 150 EEAARRLKVDCIVTGHNADDMAETVLLNFYRGDISRLKRCALSKTKEHISDENTKKHLSL 209
Query: 292 ---RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKA-AESFVTDLQTNFPST 347
+P + +E+++Y F L P T + + V DL+ P+
Sbjct: 210 ARCKPFKYTYQREIVFYAYFKKL-----PYFTTECTYASGASRGDFRELVKDLERIDPTI 264
Query: 348 VSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATRE 404
+ + ++ + D + + CL CK P + + ++ + SR V +E
Sbjct: 265 IINIIKSGEMFLEDTPTNLIIKKCLRCKNPTSSADQICNACSMVEKLSRIVKECCKE 321
>gi|313221651|emb|CBY36134.1| unnamed protein product [Oikopleura dioica]
Length = 390
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 90/248 (36%), Gaps = 35/248 (14%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
KLC RCN V+ + I C+ C + + + K K+ + KV + SG S
Sbjct: 4 KLCERCNERAACVLRYDRSILCRECFCRIFEEEVHNTITKYKLFKSGQKVAIGASGGKDS 63
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDG--SISQVSISERKANNAQIATAMKYFDSY 179
L+ +++ L+ +C + ID+G S+ E K ++ +K
Sbjct: 64 AVLMQVMK---ILNERYDYGLKLCLLSIDEGISGYRDHSLEEVKFHSNNYGLELKILS-- 118
Query: 180 FTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQ 239
Y D+ +++ +V S R+ L +
Sbjct: 119 ---------------YKDLYNWSMDEIV----------SVAGRKSNCTFCGVFRRQALDR 153
Query: 240 AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFS--DDRTGDIITLRPLRDF 297
A +L + T D+A ++ N+ G + S DD +G I ++PL+
Sbjct: 154 GAWQLGVDIVATGHNGDDVAETVLMNMLRGDVGRLSRCTAISTADDPSG-IPRVKPLKYQ 212
Query: 298 SSKEVIYY 305
E++ Y
Sbjct: 213 YEAEIVKY 220
>gi|61657492|emb|CAI44404.1| hypothetical protein [Thermotoga sp. KOL6]
Length = 304
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 64 CPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C V LR +I CK +++ + A+ K +M + K+L+A SG S+
Sbjct: 3 CTKCK-KTAVVKLRHYNIKLCKEHFNEFIEQRVEKAIKKFRMFKKDSKILIAVSGGKDSV 61
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV----SISERKAN----NAQIATAMK 174
+L H+L K++ + V A++I G + V I E+ A + A +
Sbjct: 62 SLWHIL---------KKLGYDVDALFIRAGKSAMVQKAQEIVEKNAEILNTKLHVVDATQ 112
Query: 175 YFDS 178
YFD
Sbjct: 113 YFDG 116
>gi|218884033|ref|YP_002428415.1| ATPase, PP-loop superfamily [Desulfurococcus kamchatkensis 1221n]
gi|218765649|gb|ACL11048.1| ATPase, PP-loop superfamily [Desulfurococcus kamchatkensis 1221n]
Length = 321
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC V K +C+ ++Y + + K +M++P D V++A SG SM+
Sbjct: 4 CRRCGREAEYRVSYAKVWFCREHFIEYFEERVVETIRKYRMIKPGDSVVIAVSGGKDSMS 63
Query: 124 LLHLL 128
LL +L
Sbjct: 64 LLTVL 68
>gi|345006050|ref|YP_004808903.1| hypothetical protein [halophilic archaeon DL31]
gi|344321676|gb|AEN06530.1| protein of unknown function UPF0021 [halophilic archaeon DL31]
Length = 321
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 15/130 (11%)
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK----GAHVPLDVGFSDDRT-- 285
R++LL A++L K+ T D A + N+ G H +G DDR
Sbjct: 149 FRRDLLESYAEELGADKLLTGHNLDDEAQTALMNVLEGDIKQVAKHFDASIGGFDDREET 208
Query: 286 -GDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAE--SFVTDLQT 342
+ +PLRD KEV Y DL P H+ P AS E + L+
Sbjct: 209 EAFVPRAKPLRDVPEKEVALYAHLKDL-PAHITEC-----PHASEAYRGEIQELLLKLEE 262
Query: 343 NFPSTVSTVF 352
N P T ++
Sbjct: 263 NHPGTRHSIM 272
>gi|222109722|ref|YP_002551986.1| pp-loop domain-containing protein [Acidovorax ebreus TPSY]
gi|254789874|sp|B9MCI6.1|TTCA_ACIET RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|221729166|gb|ACM31986.1| PP-loop domain protein [Acidovorax ebreus TPSY]
Length = 317
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 93/254 (36%), Gaps = 46/254 (18%)
Query: 104 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERK 163
M+ DK++V SG S LL +L+ +L + F + A+ +D
Sbjct: 53 MIEEGDKIMVCMSGGKDSYTLLDILR---KLQKRAPVKFDIVAVNLD------------- 96
Query: 164 ANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLS 223
Q YF + +N Y+ V + E +T +L
Sbjct: 97 --QKQPGFPEHVLPDYFKSIGVQYHIENQDTYSVVKRVVPEG-----------KTTCSLC 143
Query: 224 SRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG---KGAHVPLDVGF 280
SR LR+ +L + A L CTK+ + D+ ++ N+ G KG L
Sbjct: 144 SR------LRRAILYKVADDLGCTKLALGHHRDDIVATLMLNMFYGGRMKGMPPKL---V 194
Query: 281 SDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDL 340
SDD G + +RPL K+ + + P+ +L D L + A + +
Sbjct: 195 SDD--GKHVVIRPLCYVPEKDTARWAQYQQF-PIIPCNLCGSQDGLQRV--AVNEMLREW 249
Query: 341 QTNFPSTVSTVFRT 354
FP + ++ R
Sbjct: 250 DKKFPGRIESMLRA 263
>gi|261211593|ref|ZP_05925880.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio sp. RC341]
gi|260838943|gb|EEX65575.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Vibrio sp. RC341]
Length = 310
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 44/259 (16%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
A+ M+ D+++V SG S +L +L M L I F + A+ +D
Sbjct: 30 AIADFNMIEDGDRIMVCLSGGKDSFTMLEIL---MSLQKSAPISFELIAVNLD------- 79
Query: 158 SISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
+K +Y +S + +E D + D ++P +
Sbjct: 80 ----QKQPGFPAHVLPEYLES-LGVEYKIVEEDTYSIVQD--KVPEGK------------ 120
Query: 218 TVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG-KGAHVPL 276
T L SR LR+ +L + AK+L TKI + D+ + N+ G K +P
Sbjct: 121 TTCALCSR------LRRGILYRTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPP 174
Query: 277 DVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK-AAES 335
+ SD+ G+ + +RPL K++I Y P+ +P + P +LQ+ A +
Sbjct: 175 KL-VSDN--GEHVVIRPLAYCREKDIIKYADMRSY-PI-IPCNLCGSQP--NLQRQAVKL 227
Query: 336 FVTDLQTNFPSTVSTVFRT 354
+ D FP + T+FR
Sbjct: 228 MLNDWDKRFPGRIETMFRA 246
>gi|121592925|ref|YP_984821.1| C32 tRNA thiolase [Acidovorax sp. JS42]
gi|205830365|sp|A1W3C0.1|TTCA_ACISJ RecName: Full=tRNA 2-thiocytidine biosynthesis protein TtcA
gi|120605005|gb|ABM40745.1| tRNA s(2)C-32 sulfurtransferase [Acidovorax sp. JS42]
Length = 317
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 93/254 (36%), Gaps = 46/254 (18%)
Query: 104 MMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERK 163
M+ DK++V SG S LL +L+ +L + F + A+ +D
Sbjct: 53 MIEEGDKIMVCMSGGKDSYTLLDILR---KLQKRAPVKFDIVAVNLD------------- 96
Query: 164 ANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLS 223
Q YF + +N Y+ V + E +T +L
Sbjct: 97 --QKQPGFPEHVLPDYFKSIGVQYHIENQDTYSVVKRVVPEG-----------KTTCSLC 143
Query: 224 SRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLG---KGAHVPLDVGF 280
SR LR+ +L + A L CTK+ + D+ ++ N+ G KG L
Sbjct: 144 SR------LRRAILYKVADDLGCTKLALGHHRDDIVATLMLNMFYGGRMKGMPPKL---V 194
Query: 281 SDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDL 340
SDD G + +RPL K+ + + P+ +L D L + A + +
Sbjct: 195 SDD--GKHVVIRPLCYVPEKDTARWAQYQQF-PIIPCNLCGSQDGLQRV--AVNEMLREW 249
Query: 341 QTNFPSTVSTVFRT 354
FP + ++ R
Sbjct: 250 DKKFPGRIESMLRA 263
>gi|390350266|ref|XP_795634.3| PREDICTED: uncharacterized protein LOC590956 [Strongylocentrotus
purpuratus]
Length = 1177
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
AL + KM+R D+VLV SG S++LLH L++ + K I F + A+ +D
Sbjct: 929 ALDEYKMLRDGDRVLVCLSGGKDSLSLLHCLRQYQFAAKKKGITFDLGAVTVD 981
>gi|313894633|ref|ZP_07828196.1| tRNA(Ile)-lysidine synthetase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313440823|gb|EFR59252.1| tRNA(Ile)-lysidine synthetase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 332
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 42/221 (19%)
Query: 86 CLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVC 145
L++ +NH + K+ ++L+A SG SMALLHLLQ+ +++H+ + +
Sbjct: 5 ALIRRVNHTLKL----HKLFPEHSRILIACSGGPDSMALLHLLQD---IAAHRHTKYKL- 56
Query: 146 AIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQ 205
I I D SI S E L ++ + YT ++P
Sbjct: 57 GIAIVDHSIRPESKDE------------------VLWLRNQVDALGLSFYTTTFDVP--T 96
Query: 206 FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIAN 265
+KD ++ S + + + +R L + A+ I A + D A I+A+
Sbjct: 97 LSKDLKL-----------SEETVGRRVRYQWLNEIAQSEGYDYIAVAHHKDDQAESILAH 145
Query: 266 ISLGKGAHVPLDVG-FSDDRTGDIITLRPLRDFSSKEVIYY 305
+ G G + + S+D DI +RPL D + E++ Y
Sbjct: 146 LIRGTGLNGLTGMAVVSNDY--DIPVIRPLLDVTKAELLAY 184
>gi|118378423|ref|XP_001022387.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89304154|gb|EAS02142.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 320
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 59/316 (18%), Positives = 116/316 (36%), Gaps = 56/316 (17%)
Query: 62 KLCPRCNTNNGEVVL-RLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
K C C +V + + C+ C + + + + + +++ V SG
Sbjct: 3 KFCETCKDKKAFIVRPKTGKLICQECFFTAFEEEIHYTIISNNLFKRGERIAVGASGGKD 62
Query: 121 SMALLHLLQE-------GMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAM 173
S L+H++ G++L IL S ID+G S + Q+ +
Sbjct: 63 STVLIHVMNHLNKKYDYGLEL-----ILLS-----IDEGITGYRDDSLETVKDNQVTYGL 112
Query: 174 KYFDSYFTCLEQALEPDNMKL--YTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQT 231
+ +K+ Y D+ +++ K +N +
Sbjct: 113 Q-----------------LKILSYKDLYGWTMDEIVKQIGLN----------NNCTFCGV 145
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFS-----DDRTG 286
R+ L + A+ LNC KI T D+A I+ NI+ G + V + D
Sbjct: 146 FRRQALDRGAQLLNCDKILTGHNADDIAETILMNIARGDFFRLGRCVQITTGGDGVDDDD 205
Query: 287 DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPS 346
I L+P + KE++ Y L S + P A E + D++ PS
Sbjct: 206 HIPRLKPFKYTYEKEIVLYAYHKKLVYF---STECIYSPNAYRGHVRE-LIKDIEKVRPS 261
Query: 347 TVSTVFRTADKLSLDL 362
++ + +A+++++++
Sbjct: 262 SIVDIIHSAEQIAINI 277
>gi|428219369|ref|YP_007103834.1| tRNA(Ile)-lysidine synthase [Pseudanabaena sp. PCC 7367]
gi|427991151|gb|AFY71406.1| tRNA(Ile)-lysidine synthase [Pseudanabaena sp. PCC 7367]
Length = 337
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 206 FAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIAN 265
AK+ + +T TT + + + R L++ A++ N + T T++DLA + N
Sbjct: 81 LAKNWGLPFWLRTATTPPASEATAREWRYGQLIELAQQTNYNYVVTGHTRSDLAETFLYN 140
Query: 266 ISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKE 301
G G+ +G+ + + I+ +RPL FS +
Sbjct: 141 AIRGSGSDGLRSLGWQRELSQGILLVRPLLSFSRSQ 176
>gi|341890999|gb|EGT46934.1| hypothetical protein CAEBREN_25375 [Caenorhabditis brenneri]
Length = 372
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL 291
R+ L + A K+ TK+ T D+A ++ N+ G A + GD+
Sbjct: 153 FRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLERCTNIVTGEEGDLPRA 212
Query: 292 RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTV 351
+PL+ ++++ Y N L + + P A + A +V DL+ P + +
Sbjct: 213 KPLKYCFERDIVMYARTNQLEYFYTECIYA---PNA-YRGYARKYVRDLEKVHPRAILDL 268
Query: 352 FRTADKLS----LDLTSMNVNNTC------LLCKAPL 378
++ +K+S +++ ++ + C LCKA L
Sbjct: 269 IQSGEKVSVKKEVEMPTLKICERCGYMTSQKLCKACL 305
>gi|389585445|dbj|GAB68176.1| hypothetical protein PCYB_127410 [Plasmodium cynomolgi strain B]
Length = 593
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
Y+ + + N +L+ + N + +++ K G G ++P+ + D+R
Sbjct: 317 YINELIIYNAILKYSIDENINYVLFGNNANNISNKSFLYTIFGNGINLPICTAYIDNRYK 376
Query: 287 DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSL------ATLADPLASLQKAAESFVTDL 340
++ ++PLRD SKE+ Y + +++ + S T+ + L+SL D
Sbjct: 377 NVNFIKPLRDLLSKEIYIYCYYKNIAYLRNTSFDGNIVYRTINEMLSSL---------DS 427
Query: 341 QTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLAS 386
+ N T S + T L + MNV N +A +++ A +A+
Sbjct: 428 KNN---TTSIINNTTGNLVNKVNFMNVGN-----EASIESVAKMAN 465
>gi|329298379|ref|ZP_08255715.1| tRNA 2-thiocytidine biosynthesis protein TtcA [Plautia stali
symbiont]
Length = 311
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 103/270 (38%), Gaps = 46/270 (17%)
Query: 88 LQYLNHKFRAALGKS----KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFS 143
L L + R +G++ M+ D+++V SG S +L +L+ L + FS
Sbjct: 15 LNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILR---NLQQSAPVNFS 71
Query: 144 VCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPL 203
+ A+ +D Q+ +Y L + N Y+ V E
Sbjct: 72 LVAVNLD---------------QKQLGFPAHVLPAYLDTLGVEYQIVNEDTYSIVKE--- 113
Query: 204 EQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKII 263
K+ + TT S L LR+ L + A +L CTKI + D+ +
Sbjct: 114 ----------KIPEGKTTCS----LCSRLRRGTLYRTATELGCTKIALGHHRDDILQTLF 159
Query: 264 ANISL-GKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATL 322
N+ GK +P + +D G I +RPL K+++ + P+ +P
Sbjct: 160 LNMFYGGKMKGMPPKLMSND---GKHIVIRPLAYCREKDIVRFAEARQY-PI-IPCNLCG 214
Query: 323 ADPLASLQKAAESFVTDLQTNFPSTVSTVF 352
+ P Q A+ + D +P + T+F
Sbjct: 215 SQPNLQRQVVAD-MLRDWDKRYPGRIETMF 243
>gi|327398487|ref|YP_004339356.1| PP-loop domain-containing protein [Hippea maritima DSM 10411]
gi|327181116|gb|AEA33297.1| PP-loop domain protein [Hippea maritima DSM 10411]
Length = 294
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 64 CPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C RC EV L+ + +C+ C L + ++ A+ + KM +DK+L+A SG SM
Sbjct: 3 CIRCK-KEAEVELKSHNAAFCRDCFLLFFYNQLNKAVKQFKMFDKEDKILIAVSGGKDSM 61
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYID--DGSISQVSISERKA 164
+L L E + ++ A+++D G S+++ S+ +A
Sbjct: 62 SLWSALLE---------LGYNTTALFVDLGIGGFSELARSKVEA 96
>gi|157866234|ref|XP_001681823.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125122|emb|CAJ02740.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 693
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 259 ATKIIANISLGKGAH-VPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVP 317
AT + + G G V GF T +++ LRPLR KE I Y ++ + P
Sbjct: 383 ATAALEALVTGAGGEGVVHGAGFRGF-THEVVCLRPLRAMLPKETIMYTRLCGIAGSYTP 441
Query: 318 SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSM 365
+L T S+ + E FV + T++ + + V T +L + +M
Sbjct: 442 ALCT-GTATRSVHRTLEQFVLTMMTSYRTMIFNVLNTVQRLEVHPAAM 488
>gi|341892554|gb|EGT48489.1| hypothetical protein CAEBREN_07622 [Caenorhabditis brenneri]
Length = 372
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL 291
R+ L + A K+ TK+ T D+A ++ N+ G A + GD+
Sbjct: 153 FRRQALDRGAFKIGATKLVTGHNADDMAETVLMNVLRGDIARLERCTNIVTGEEGDLPRA 212
Query: 292 RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTV 351
+PL+ ++++ Y N L + + P A + A +V DL+ P + +
Sbjct: 213 KPLKYCFERDIVMYARTNQLEYFYTECIYA---PNA-YRGYARKYVRDLEKVHPRAILDL 268
Query: 352 FRTADKLS----LDLTSMNVNNTC------LLCKAPL 378
++ +K+S +++ ++ + C LCKA L
Sbjct: 269 IQSGEKVSVKKEVEMPTLKICERCGYMTSQKLCKACL 305
>gi|46122075|ref|XP_385591.1| hypothetical protein FG05415.1 [Gibberella zeae PH-1]
Length = 376
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 38/218 (17%)
Query: 197 DVAELPLEQFAKDSEIN----KMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTA 252
D + LPL+ D +++ ++F + TL+S +L+ L ++LLLQ A+ CT +
Sbjct: 133 DWSTLPLDAGTPDEDLSARLQRLFDALPTLTSCSDVLRLLIRHLLLQKAQDHACTALLLG 192
Query: 253 ETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEV------IYY- 305
+ T LA ++ ++ G+G VP+ V D + T + +++E +YY
Sbjct: 193 HSTTALAALTLSEVANGRGFAVPIQVA---DGMTTVCTYEAVEGGAAQETSRLEFPVYYP 249
Query: 306 --NIFNDLSPVH---VPSLATL--ADPLA-------------SLQKAAESFVTDLQTNFP 345
IF + + VPSL + ADP S+++ + ++ +
Sbjct: 250 LREIFRNEMKQYIDLVPSLKEVVPADPAGTKAGSSVVSHKDLSIEEVMARYFESVEEGYS 309
Query: 346 STVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRAD 383
V+ V RTA KL C C LD D
Sbjct: 310 GIVANVVRTAGKLE----RAPAETFCGSCGMSLDAEGD 343
>gi|255720959|ref|XP_002545414.1| VEG136 protein [Candida tropicalis MYA-3404]
gi|240135903|gb|EER35456.1| VEG136 protein [Candida tropicalis MYA-3404]
Length = 384
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 124/328 (37%), Gaps = 46/328 (14%)
Query: 39 QVLNGDEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIY--CKACLLQYLNHKFR 96
+++N E T +++ + + LC C++ V+ R K++ CK C +
Sbjct: 3 EIINNIPEKTVSVKKL----KVSALCELCHSRKA-VMKRPKNLMKLCKECFYNVFETEIH 57
Query: 97 AALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQ 156
+ +K+ P +KV + SG S L +L+ L+ + + ID+G +
Sbjct: 58 NTITSNKLFYPGEKVAIGASGGKDSTVLASILK---TLNERYNYGLELVLLSIDEGIVG- 113
Query: 157 VSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFA-KDSEINKM 215
Y D +++ N K Y E+PLE + KD M
Sbjct: 114 ------------------YRDDSLATVKR-----NQKQY----EMPLEIVSYKDLYNWSM 146
Query: 216 FQTVTTLSSRQ--YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAH 273
+ V R LR+ L + A+KL + T D+A ++ NI G A
Sbjct: 147 DEIVACAGIRSSCTYCGVLRRQALDRGAEKLGIKHVVTGHNADDVAETVLMNILRGDVAR 206
Query: 274 VPLDVGFSDDRTGDIITL-RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKA 332
+ G I +P + KE++ Y + L + + T A P A +
Sbjct: 207 LENSTNIMTTSAGSPIKRSKPFKYTYQKEIVLYAHYKKLD--YFSTECTYA-PEA-FRGT 262
Query: 333 AESFVTDLQTNFPSTVSTVFRTADKLSL 360
A + L++ PS + + + + L L
Sbjct: 263 ARELLKGLESIRPSCIMDIIYSGEHLVL 290
>gi|148378171|ref|YP_001252712.1| hypothetical protein CBO0165 [Clostridium botulinum A str. ATCC
3502]
gi|153931125|ref|YP_001382571.1| hypothetical protein CLB_0202 [Clostridium botulinum A str. ATCC
19397]
gi|153937579|ref|YP_001386124.1| hypothetical protein CLC_0213 [Clostridium botulinum A str. Hall]
gi|148287655|emb|CAL81720.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
gi|152927169|gb|ABS32669.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152933493|gb|ABS38992.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
Length = 240
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 37/170 (21%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+G +++ DK+ V SG S+ LLHLL++ S K F + AI
Sbjct: 1 MQKLLGKLRRAVGDFNLIQNGDKIAVGLSGGKDSIVLLHLLKKYQSFSPEK---FDLIAI 57
Query: 148 YIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFA 207
+D + + F+ LE N+ LY + + P+++
Sbjct: 58 TLDTMTGAD-----------------------FSPLENVCSNINVPLY--IYKTPIKEIV 92
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
D K + L LR+ L +KKL C KI + D
Sbjct: 93 FDLRKEK---------NPCSLCANLRRGALNNYSKKLGCNKIALGHHKND 133
>gi|269986991|gb|EEZ93267.1| PP-loop domain protein [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 209
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 34/164 (20%)
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIAN---------ISLGKGAHVPLDVGFS 281
LR++L+ AA +++ K+ TA D A +I N + LG + V + GF
Sbjct: 42 VLRRHLINYAASEVSADKVATAHNMDDEAENVIMNLVQNDIEKMVRLGAYSGVIKEKGF- 100
Query: 282 DDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLA--SLQKAAESFVTD 339
+ ++P S KE + +++ ND++ +H P P A L+ +
Sbjct: 101 ------VPRIKPFLFLSEKETMLFSMLNDINAIHTPC------PYAGMGLRGLISREIKR 148
Query: 340 LQTNFPSTVSTVFRTADKLSLDLTSMNVN------NTCLLCKAP 377
++T F V T LD+ + +V+ N C C P
Sbjct: 149 METEFIGAKRNVINTM----LDIKNQHVSKNGLKINKCRYCGFP 188
>gi|358383613|gb|EHK21277.1| hypothetical protein TRIVIDRAFT_52093 [Trichoderma virens Gv29-8]
Length = 377
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 37/217 (17%)
Query: 197 DVAELPLEQFAKDSE-INKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQ 255
D LP+ D+E + F ++ +++SR L+ ++LLL A + + + + +
Sbjct: 135 DWTALPVPAGESDAERLQLFFSSLPSVTSRADSLRLFIRHLLLDVAVERSHSALLFGHST 194
Query: 256 TDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSK-------EVIYYNIF 308
T LA ++ ++ G+G VP + +D + T RP D +S I + I+
Sbjct: 195 TALAALTLSEVANGRGFAVPWQI---NDGLFTVCTYRPSADPASAGEASQEDAKIQFPIY 251
Query: 309 NDLSPV----------HVPSLATL---ADPLA---------SLQKAAESFVTDLQTNFPS 346
L + PS+ L AD A S+++ + ++ +
Sbjct: 252 YPLREILKAEVMTYLGTTPSVQELVPSADGAASSVVSHKDQSIEEVMARYFDGVEGPYSG 311
Query: 347 TVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRAD 383
V+ V RTA KL +TS + C LC LD D
Sbjct: 312 IVTNVVRTAGKLDRLVTS----HYCRLCGITLDQEGD 344
>gi|433639340|ref|YP_007285100.1| TIGR00269 family protein [Halovivax ruber XH-70]
gi|433291144|gb|AGB16967.1| TIGR00269 family protein [Halovivax ruber XH-70]
Length = 321
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 15/137 (10%)
Query: 232 LRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGK----GAHVPLDVGFSDDRTGD 287
R++LL + A++L +FT D A + N G H +G DR
Sbjct: 149 FRRDLLSRYAEELGADLLFTGHNLDDEAQTALMNFLEGDVGQIAKHFDASLGPLPDREDQ 208
Query: 288 ---IITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAE--SFVTDLQT 342
+ +PLRD KEV Y NDL P H+ P AS E + DL+
Sbjct: 209 DDFVARAKPLRDVPEKEVALYAHLNDL-PAHITEC-----PHASEAYRGEIQGLLYDLEE 262
Query: 343 NFPSTVSTVFRTADKLS 359
P T ++ ++L+
Sbjct: 263 RHPGTRHSIMAGYEELA 279
>gi|357623995|gb|EHJ74923.1| putative Y71H2B.5 [Danaus plexippus]
Length = 1088
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDD 151
A+ + M+R DK+LV SGS S+ALLH + + + K I FS+ + I+D
Sbjct: 839 AIHEYNMVRAGDKILVCLSGSRESVALLHTMHQYQFYARSKGIHFSIASRAIED 892
>gi|308158669|gb|EFO61238.1| ATPase of the PP-loop superfamily implicated in cell cycle control,
putative [Giardia lamblia P15]
Length = 360
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 128/319 (40%), Gaps = 36/319 (11%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSS---HKR 139
C+ C L + + + + ++RP + + + SG S +LH+L ++L +
Sbjct: 32 CRECFLCAIETEVQRTIEIHNLIRPGESIALGVSGGKDSSVMLHILHT-LRLRYQDVYDG 90
Query: 140 ILFSVCAI------YIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMK 193
+ F + A+ Y + + ++ +I + + + Y L+Q + N
Sbjct: 91 VRFVMVAVNEGIQGYRGESLACLQRLRKKYPYELEI---VGFKERYGRTLDQIVNTVNGD 147
Query: 194 LYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAE 253
D P++ +D+ Q ++ LR+N L + + +CTK+ T
Sbjct: 148 SCNDTFA-PIKADLEDANDTGRPQPTAKTTTACSFCGILRRNSLSYGSLQTHCTKVATGH 206
Query: 254 TQTDLATKIIANISLGKGAH-VPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFN--D 310
D A I+ N+ G A V SD G + ++PL + + ++++ Y D
Sbjct: 207 NADDNAETILLNLIRGDAAKLVRCSEPLSDLNQG-VARIKPLCNIAQRDIVIYAHLKRLD 265
Query: 311 LSPVHVPSLATLADPLASLQKAAESFVTDLQTN--FPSTVSTVFRTADKLSL-------D 361
V P T +L+ SF+T+L T + + + KL L
Sbjct: 266 YFSVECPYATT------ALRGKPRSFLTNLCTKPAYSDVALRIMGSTRKLRLKTTHEARK 319
Query: 362 LTSMNVNNTCLLCKAPLDT 380
LTS+++ C C++P+ T
Sbjct: 320 LTSLHL---CPSCQSPVST 335
>gi|399925204|ref|ZP_10782562.1| PP-loop family protein [Peptoniphilus rhinitidis 1-13]
Length = 272
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 94 KFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGS 153
KF + K +++ P DK+ VA SG S+ L LLQE L H ++ F + I +D G
Sbjct: 25 KFVQGVNKYELISPGDKIAVAISGGKDSLTLAKLLQE---LKKHNKVPFELEFITMDPGY 81
Query: 154 ISQ 156
+ +
Sbjct: 82 LPE 84
>gi|321467456|gb|EFX78446.1| hypothetical protein DAPPUDRAFT_105239 [Daphnia pulex]
Length = 679
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV 157
AL + KM+ D+VL+ SG S++LLH L++ + S I F + AI +D GS S
Sbjct: 430 ALLRYKMISNGDRVLICVSGGKDSLSLLHTLRQYQKQSKGFGISFDIGAITVDPGSSSLA 489
Query: 158 SISERKAN 165
++ N
Sbjct: 490 FLTSMSGN 497
>gi|340378491|ref|XP_003387761.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Amphimedon
queenslandica]
Length = 325
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 5/145 (3%)
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT 290
R+ L + A L KI T D+A ++ N+ G A + G I
Sbjct: 149 VFRRQALDRGALLLKADKIVTGHNADDIAETVLMNVLRGDIARLQRCTHIITGSDGAIPR 208
Query: 291 LRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVST 350
+P + KE++ Y F L S + P A + A +++ DL+ PST+
Sbjct: 209 SKPFKYSYEKEIVMYAYFKKLDYF---STECVYSPNA-YRGHARTYLKDLEAIRPSTIID 264
Query: 351 VFRTADKLSLDL-TSMNVNNTCLLC 374
+ + D LS+ + V TC C
Sbjct: 265 IIYSGDSLSVKAEIKLPVQGTCSRC 289
>gi|221059635|ref|XP_002260463.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810536|emb|CAQ41730.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 583
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
Y+ + + N +L+ + N + +++ K G G ++P+ + D+R
Sbjct: 306 YINELIIYNAILKYSMDENINYVLFGNNANNISNKSFLYTIFGNGINLPICTAYIDNRYK 365
Query: 287 DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSL------ATLADPLASL 329
+I ++PLRD +KE+ Y + +++ + S T+ + L+SL
Sbjct: 366 NINLIKPLRDLLNKEIYIYCFYKNIAYLRNTSFDGNIVYGTINEMLSSL 414
>gi|429749461|ref|ZP_19282583.1| tRNA(Ile)-lysidine synthetase [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429168114|gb|EKY09966.1| tRNA(Ile)-lysidine synthetase [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 418
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 47/197 (23%)
Query: 110 KVLVAFSGSHSSMALLHLLQ-EGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQ 168
K LVA SG S+ L HLL +G++ I+ + C + +E A+ A
Sbjct: 3 KWLVAISGGVDSVVLAHLLHSQGIE------IVLAHCNFSLRG--------AESDADEA- 47
Query: 169 IATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYL 228
+ Y L ALE V +Q+AKD +N T L++R+
Sbjct: 48 ------FVRQYAATLGVALE---------VVRFNTKQYAKDCGLN------TQLAARE-- 84
Query: 229 LQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDI 288
LR + AKK +C+ I TA D I N+S G G L + +T +
Sbjct: 85 ---LRYRWFAEMAKKHHCSAIATAHHANDNIETFIINLSRGSGLDGLLGI---PQQTAQL 138
Query: 289 ITLRPLRDFSSKEVIYY 305
+ RPL +E++ Y
Sbjct: 139 V--RPLLHMQREEILSY 153
>gi|424828117|ref|ZP_18252858.1| hypothetical protein IYC_07870 [Clostridium sporogenes PA 3679]
gi|365979600|gb|EHN15653.1| hypothetical protein IYC_07870 [Clostridium sporogenes PA 3679]
Length = 240
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 66/170 (38%), Gaps = 37/170 (21%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+G +++ DK+ V SG S+ LLHLL+ S K F + AI
Sbjct: 1 MQKLLGKLRRAIGDFNLIQNSDKIAVGLSGGKDSITLLHLLKRYQSFSPEK---FDLIAI 57
Query: 148 YIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFA 207
+D + + F+ +E N+ LY + + P+++
Sbjct: 58 TLDTMTGAD-----------------------FSPIESVCSDINVPLY--IYKTPIKEIV 92
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTD 257
D K + L LR+ L +KKL C KI + D
Sbjct: 93 FDVRKEK---------NPCSLCANLRRGALNNYSKKLGCNKIALGHHKND 133
>gi|268573102|ref|XP_002641528.1| Hypothetical protein CBG09825 [Caenorhabditis briggsae]
Length = 657
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 103 KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR-ILFSVCAIYIDDGS 153
KM+R DKVLV SG S++LLH+L+ Q + R F + AI +D GS
Sbjct: 418 KMIRNGDKVLVCLSGGKDSLSLLHILRHYQQRCNKARSTSFQLGAITVDPGS 469
>gi|182418849|ref|ZP_02950113.1| ExsB family protein [Clostridium butyricum 5521]
gi|237668843|ref|ZP_04528827.1| ExsB family protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377302|gb|EDT74864.1| ExsB family protein [Clostridium butyricum 5521]
gi|237657191|gb|EEP54747.1| ExsB family protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 241
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 68/180 (37%), Gaps = 38/180 (21%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+ ++ DK+ V SG S+ LLHLL + S K F + AI
Sbjct: 1 MQKLLSKMRQAINDYNLIEDGDKIAVGLSGGKDSLTLLHLLNSYKKFSPQK---FELIAI 57
Query: 148 YIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFA 207
++ G + + KL D+ E+P +
Sbjct: 58 TLNPGGVDNTPLH--------------------------------KLCKDL-EIPFHEIQ 84
Query: 208 KDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS 267
D I K+ + ++ L LR+ L AK+L C K+ + D ++ ++S
Sbjct: 85 TD--IQKIVFEIRKENNPCSLCAKLRRGALHNNAKELGCNKVALGHHKDDAIETLMLSLS 142
>gi|307596367|ref|YP_003902684.1| PP-loop domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307551568|gb|ADN51633.1| PP-loop domain protein [Vulcanisaeta distributa DSM 14429]
Length = 393
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 66 RCNTNNGEVVLRL---KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
RC E +R+ K CK ++++ + R + + K++R D VLVA SG S
Sbjct: 69 RCGICGREAYVRIPYAKLTLCKEHFMEFIVKRVRRTIEEYKLIRRGDLVLVAVSGGKDSS 128
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDG 152
+LH+L + + F + A +ID G
Sbjct: 129 TMLHVLS-----TLRDSLKFDIVAYHIDQG 153
>gi|341877670|gb|EGT33605.1| hypothetical protein CAEBREN_23487 [Caenorhabditis brenneri]
Length = 966
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 103 KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR-ILFSVCAIYIDDGS 153
KM+R DKVLV SG S++LLH+L+ Q + R F + AI +D GS
Sbjct: 724 KMIRNGDKVLVCLSGGKDSLSLLHILRHYQQRCNKARSTSFELGAITVDPGS 775
>gi|168177499|ref|ZP_02612163.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|168182225|ref|ZP_02616889.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|226947389|ref|YP_002802480.1| hypothetical protein CLM_0209 [Clostridium botulinum A2 str. Kyoto]
gi|237793484|ref|YP_002861036.1| hypothetical protein CLJ_B0204 [Clostridium botulinum Ba4 str. 657]
gi|182671105|gb|EDT83079.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|182674626|gb|EDT86587.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|226842841|gb|ACO85507.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
gi|229261836|gb|ACQ52869.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 240
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+G +++ DK+ V SG S+ LLHLL++ S K F + AI
Sbjct: 1 MQKLLGKLRRAVGDFNLIQNGDKIAVGLSGGKDSIVLLHLLKKYQSFSPEK---FDLIAI 57
Query: 148 YIDDGSISQVSISERKANNAQI 169
+D + + S E +N +
Sbjct: 58 TLDTMTGADFSPLENVCSNINV 79
>gi|154249688|ref|YP_001410513.1| PP-loop domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153624|gb|ABS60856.1| PP-loop domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 323
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 64 CPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C +N + LR ++ +CK +++ + + A+ KM + +DKVLVA S S
Sbjct: 3 CKKC-SNQAVIHLRAHNVAFCKEHFIEFFEKRVQKAINDFKMFQKEDKVLVAVSSGKDSS 61
Query: 123 ALLHLLQE 130
A+L+ L++
Sbjct: 62 AVLYALKK 69
>gi|387816394|ref|YP_005676738.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Clostridium botulinum
H04402 065]
gi|322804435|emb|CBZ01985.1| tRNA(Cytosine32)-2-thiocytidine synthetase [Clostridium botulinum
H04402 065]
Length = 240
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+G +++ DK+ V SG S+ LLHLL++ S K F + AI
Sbjct: 1 MQKLLGKLRRAVGDFNLIQNGDKIAVGLSGGKDSIVLLHLLKKYQSFSPEK---FDLIAI 57
Query: 148 YIDDGSISQVSISERKANNAQI 169
+D + + S E +N +
Sbjct: 58 TLDTMTGADFSPLENVCSNINV 79
>gi|313227291|emb|CBY22437.1| unnamed protein product [Oikopleura dioica]
Length = 388
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 91/248 (36%), Gaps = 35/248 (14%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
KLC RCN V+ + I C+ C + + + K K+ + KV + SG S
Sbjct: 4 KLCERCNERAACVLRYDRSILCRECFCRIFEEEVHNTITKYKLFKRGQKVAIGASGGKDS 63
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDG--SISQVSISERKANNAQIATAMKYFDSY 179
L+ +++ L+ +C + ID+G S+ E K ++ +K
Sbjct: 64 AVLMQVMK---ILNERYDYGLKLCLLSIDEGISGYRDHSLEEVKFHSNNYGLELKILS-- 118
Query: 180 FTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQ 239
Y D+ +++ +V S R+ L +
Sbjct: 119 ---------------YKDLYNWSMDEIV----------SVAGRKSNCTFCGVFRRQALDR 153
Query: 240 AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVP--LDVGFSDDRTGDIITLRPLRDF 297
A +L + T D+A ++ N+ G + + +DD +G I ++PL+
Sbjct: 154 GAWQLGVDIVATGHNGDDVAETVLMNMLRGDVGRLSRCTAITTADDPSG-IPRVKPLKYQ 212
Query: 298 SSKEVIYY 305
E++ Y
Sbjct: 213 YEAEIVKY 220
>gi|337288685|ref|YP_004628157.1| hypothetical protein TOPB45_1141 [Thermodesulfobacterium sp. OPB45]
gi|334902423|gb|AEH23229.1| protein of unknown function UPF0021 [Thermodesulfobacterium
geofontis OPF15]
Length = 408
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQE 130
CK C + ++ + + K KM++PQDKV V SG S LL +L++
Sbjct: 41 CKNCYNNFFENRIKKTIEKYKMIKPQDKVGVFLSGGKDSSTLLFVLKK 88
>gi|153940664|ref|YP_001389528.1| hypothetical protein CLI_0220 [Clostridium botulinum F str.
Langeland]
gi|384460611|ref|YP_005673206.1| hypothetical protein CBF_0193 [Clostridium botulinum F str. 230613]
gi|152936560|gb|ABS42058.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
gi|295317628|gb|ADF98005.1| conserved hypothetical protein [Clostridium botulinum F str.
230613]
Length = 240
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+G +++ DK+ V SG S+ LLHLL++ S K F + AI
Sbjct: 1 MQKLLGKLRRAVGDFNLIQNGDKIAVGLSGGKDSVVLLHLLKKYQSFSPEK---FDLIAI 57
Query: 148 YIDDGSISQVSISERKANNAQI 169
+D + + S E +N +
Sbjct: 58 TLDTMTGADFSPLENVCSNINV 79
>gi|193211090|ref|NP_497589.3| Protein Y71H2B.5 [Caenorhabditis elegans]
gi|351064123|emb|CCD72410.1| Protein Y71H2B.5 [Caenorhabditis elegans]
Length = 957
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 103 KMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR-ILFSVCAIYIDDGS 153
KM+R DKVLV SG S++LLH+L+ Q + R F + AI +D GS
Sbjct: 714 KMIRDGDKVLVCLSGGKDSLSLLHILRHYQQRCNKARSTSFELGAITVDPGS 765
>gi|161527617|ref|YP_001581443.1| PP-loop domain-containing protein [Nitrosopumilus maritimus SCM1]
gi|160338918|gb|ABX12005.1| PP-loop domain protein [Nitrosopumilus maritimus SCM1]
Length = 304
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 34/231 (14%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
C C + K + K M++ + V VA SG S+ALL ++ E SSH F
Sbjct: 22 CSKCFSNSIVRKTAKTISKHNMIKNNELVAVAVSGGKDSLALLKIIHE--MASSHN---F 76
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
+ I ID+G N + K+ C E +E + Y ++ EL
Sbjct: 77 RIKTITIDEGIPGY--------RNEALEIVEKF------CGELGVE-HKVYSYKNLFELT 121
Query: 203 LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
L++ E K +S + TLR+ + AAK + I T D
Sbjct: 122 LDEALDLRENEK--------TSSCSICGTLRRRAIDHAAKDVGADVIATGHNLDDTLQTF 173
Query: 263 IANISLGKGAHVPLDVGF--SDDRTGDIITLRPLRDFSSKEVIYYNIFNDL 311
+ N+ G +G+ D + + ++P + E+++Y ND+
Sbjct: 174 VINMLSGDTN----KIGWMEPDTSSNSLRKIKPFCEIYESEIVFYAFTNDI 220
>gi|386815901|ref|ZP_10103119.1| PP-loop domain protein [Thiothrix nivea DSM 5205]
gi|386420477|gb|EIJ34312.1| PP-loop domain protein [Thiothrix nivea DSM 5205]
Length = 254
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSIS 155
A+G+ +++R D++L+ SG S+ALLH+L H I F A+ ID S S
Sbjct: 26 AIGEYQLIRAGDRILLGLSGGKDSLALLHILN---HFQRHAPIRFEFAAVTIDPQSDS 80
>gi|407461606|ref|YP_006772923.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045228|gb|AFS79981.1| PP-loop domain-containing protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 304
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 34/231 (14%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
C C + K + K KM++ + V VA SG S+ALL ++ E S+H F
Sbjct: 22 CSECFSNSIVRKTAKTISKHKMIQNNELVAVAVSGGKDSLALLKIIHE--MSSTHN---F 76
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
+ AI ID+G N + K+ C + +E + Y D+ E+
Sbjct: 77 RIKAITIDEGIPGY--------RNEALEIVEKF------CGKLGVE-HKVYSYKDLFEIT 121
Query: 203 LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
L++ E K +S + TLR+ + AAK + I T D
Sbjct: 122 LDEALDLRENEK--------TSSCSICGTLRRRAIDHAAKDIGADVIATGHNLDDTLQTF 173
Query: 263 IANISLGKGAHVPLDVGFSDDRT--GDIITLRPLRDFSSKEVIYYNIFNDL 311
+ N+ G +G+ D T + ++P + E+++Y N++
Sbjct: 174 VINMLSGDTN----KIGWMDPDTSSNSLRKIKPFCEIYESEIVFYAFTNNI 220
>gi|344300460|gb|EGW30781.1| N-type ATP pyrophosphatase [Spathaspora passalidarum NRRL Y-27907]
Length = 380
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 115/309 (37%), Gaps = 44/309 (14%)
Query: 59 RADKLCPRCNTNNGEVVLRLKDI--YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFS 116
+ LC C++ V+ R K++ CK C + + +K+ P D V + S
Sbjct: 15 KVSALCELCHSRKA-VMKRPKNLQKLCKECFYHVFETEIHNTITSAKLFSPGDSVAIGAS 73
Query: 117 GSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
G S L +L+ L+ ++ + ID+G Y
Sbjct: 74 GGKDSTVLASILK---TLNERYNYGLNLVLLSIDEG-------------------IKGYR 111
Query: 177 DSYFTCLEQALEPDNMKLYTDVAELPLEQFA----KDSEINKMFQTVTTLSSRQYLLQTL 232
D +++ N K Y ++PLE + D ++++ SS Y L
Sbjct: 112 DDSLATVKR-----NQKQY----QMPLEIVSYKDLYDWTMDEIVSCAGIRSSCTY-CGVL 161
Query: 233 RQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL- 291
R+ L + A KL + T D+A ++ NI G A + + G +
Sbjct: 162 RRQALDRGAAKLGINHVVTGHNADDMAETVLMNILRGDVARLEKSCSIMTESVGSPVKRS 221
Query: 292 RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTV 351
+P + KE++ Y + L + + + A P A + A + L+ PS + +
Sbjct: 222 KPFKYTYQKEIVLYAHYKKLD--YFSTECSYA-PEA-FRGTARELLKSLEAIRPSCIMDI 277
Query: 352 FRTADKLSL 360
+ + LSL
Sbjct: 278 IYSGEHLSL 286
>gi|422345694|ref|ZP_16426608.1| hypothetical protein HMPREF9476_00681 [Clostridium perfringens
WAL-14572]
gi|373227359|gb|EHP49673.1| hypothetical protein HMPREF9476_00681 [Clostridium perfringens
WAL-14572]
Length = 244
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+ + ++ DK+ V SG S+ LLH+L+ + S K F + AI
Sbjct: 4 MQKLLSKTRQAIKEYNLIEDGDKIAVGLSGGKDSLTLLHILKNYQRFSPEK---FELIAI 60
Query: 148 YIDDGSISQVSISE 161
++ G + + E
Sbjct: 61 TLNPGGVDNTPLHE 74
>gi|170288548|ref|YP_001738786.1| PP-loop domain-containing protein [Thermotoga sp. RQ2]
gi|170176051|gb|ACB09103.1| PP-loop domain protein [Thermotoga sp. RQ2]
Length = 304
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 64 CPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C V LR +I CK +++ + A+ K KM K+L+A SG S+
Sbjct: 3 CTKCG-KPASVKLRHYNIKLCKEHFNEFIEQRVEKAIKKFKMFGRNSKILIAVSGGKDSV 61
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV----SISERKAN----NAQIATAMK 174
+L H+L K++ + V A++I G V I E+ A I A +
Sbjct: 62 SLWHML---------KKLGYEVDALFIRAGKSGMVQKAQEIVEKNAELLNTKLHIVDATE 112
Query: 175 YFDSYFT 181
YF+ T
Sbjct: 113 YFEGLST 119
>gi|41615304|ref|NP_963802.1| hypothetical protein NEQ523 [Nanoarchaeum equitans Kin4-M]
gi|40069028|gb|AAR39363.1| NEQ523 [Nanoarchaeum equitans Kin4-M]
Length = 324
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 79 KDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLL 128
K YCK L+Y + A+ + M P D+V VA SG S++LLH L
Sbjct: 30 KKYYCKEHFLEYFKNLAFKAIKEFNMFSPGDRVAVAVSGGKDSVSLLHFL 79
>gi|11498919|ref|NP_070150.1| hypothetical protein AF1321 [Archaeoglobus fulgidus DSM 4304]
gi|2649255|gb|AAB89924.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 287
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 108/276 (39%), Gaps = 52/276 (18%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
C+ C ++ + + ++ + +++RP+++VL+A SG S AL +L+E + +
Sbjct: 22 CEKCYPEFYRNLVKRSIKRFRILRPEERVLIAISGGKDSSALAAVLKE---------LDY 72
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
+YID G + SER + + +V L
Sbjct: 73 DAELLYIDLGIGNYSEESERVVRELSSSLDLS---------------------LNVVRLR 111
Query: 203 LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
F D KM + + T ++ ++ + A++ + + T T D+A+
Sbjct: 112 DYGFTVDDVARKMRRKTCSACG------TAKRYIMNRFARENSFDVVATGHTAEDIASFY 165
Query: 263 IANISLGKGAH----VPLDVGFSDDRTGDIIT-LRPLRDFSSKEVIYYNIFNDLSPVHVP 317
I N++ G +P + F + I+T +PL + S KE + Y + ND+
Sbjct: 166 IKNVAGGTRVWAEKLMPRNEPFDE----KIVTRAKPLFEVSEKENMLYVLVNDIP----- 216
Query: 318 SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFR 353
TL + + + V D++ P V R
Sbjct: 217 --HTLMECPHAPNPEWKEIVYDIERRKPGFVKNFVR 250
>gi|367004719|ref|XP_003687092.1| hypothetical protein TPHA_0I01520 [Tetrapisispora phaffii CBS 4417]
gi|357525395|emb|CCE64658.1| hypothetical protein TPHA_0I01520 [Tetrapisispora phaffii CBS 4417]
Length = 472
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 152/375 (40%), Gaps = 74/375 (19%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRA-------------ALGKSKMMRPQDK 110
C RC ++ ++ R K+++C C ++L+ K R L K K R +++
Sbjct: 7 CQRCKEHSAIIISR-KELFCSGCFKKFLSLKQRKTMMLDQYYQDIFKVLHKDKF-RTEEE 64
Query: 111 VLVAFSGSH----------SSMALLHLLQEGM---QLSSHKRILFSVCAIYIDDGS---- 153
L+ S S SS+ +L +L + + +L H + F + + + +G
Sbjct: 65 ALLLNSNSKILVPLSFSSSSSLVMLDILVDTLNEQRLQHHNMVGFKIELLLLFNGKEEFD 124
Query: 154 -----ISQVSISERKANNAQIATAM----KYFDSYFTCLEQALEPDNMKLYTDVAELPLE 204
++ + + AN I K++++ + L+ + K + D +
Sbjct: 125 LVNKKLTDLIDNRYSANKDCIQPHFVEISKFYETSTVLKQLLLQHTDFKTFKDTIQ---- 180
Query: 205 QFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIA 264
D I + + S R+ LL ++++L+ + + I + T LA +II+
Sbjct: 181 --HDDYTIKNLLKECPNRSVREDLLTFIKRHLIKKFTYQNKFKAIVWPFSMTQLADEIIS 238
Query: 265 NISLGKGAHVP--LDVGFSDDRTGDII--TLRPLR---------------------DFSS 299
I G+G+ + LD+ D+ G + L PLR D+
Sbjct: 239 MIVKGRGSSIANFLDMESFDENYGTNVFKNLFPLRNALLSEIDAYCHSVNLEKYLIDYKV 298
Query: 300 KEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
++ + N D + + +TL + ++ + A + D++T++ + +STV RT +KL
Sbjct: 299 QDTLLLNKLYDANNKR-SNESTLVKNM-TMNELASKYFDDIETDYSNVISTVLRTGEKLG 356
Query: 360 LDLTSMNVNNTCLLC 374
+ N C +C
Sbjct: 357 TPTANGLKNKKCEVC 371
>gi|189236796|ref|XP_969974.2| PREDICTED: similar to Y71H2B.5 [Tribolium castaneum]
gi|270006241|gb|EFA02689.1| hypothetical protein TcasGA2_TC008410 [Tribolium castaneum]
Length = 1280
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
A+ + +M++ D V+V SG S++LLH L + + +K ILFS+ A+ +D
Sbjct: 1015 AIQEFEMIKDGDNVMVCLSGGKDSLSLLHTLLQFQNYAQNKGILFSLGAVTVD 1067
>gi|340905396|gb|EGS17764.1| hypothetical protein CTHT_0071100 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 406
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 135/348 (38%), Gaps = 71/348 (20%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFR---AALGKSKMMRPQDKVLVA 114
S + K C +C ++ + R K + C+ C +++++K LGK P + +
Sbjct: 12 SSSPKPCAKCKSSPSTLESRSKPV-CQDCFQKFISNKLIRHITLLGKQIPPYPTRRYALG 70
Query: 115 FSGSHSSMALLHLLQEGMQ--LSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATA 172
S SS LL LL E ++ + +++ F + +++ S+ KA + A
Sbjct: 71 LSFGVSSSVLLSLLAENVEHNIRQGRKLPFELVVVHVAQ------SLPGEKAEETEKAVE 124
Query: 173 ---MKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLL 229
Y + Y + LP + S IN F T++ +SR+ LL
Sbjct: 125 EILQSYREKY----------PRFEFIISHITLPSPNGEETSSIN--FATLSP-ASREDLL 171
Query: 230 QTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV----------- 278
+ L + L++AAK+ C + + T +A +A + G+G V V
Sbjct: 172 RILTRQALIRAAKEKECRVLLVGHSTTAIAEMTLAEAAKGRGRGVSWLVRDGEAYEEGDE 231
Query: 279 ---------GFSDDRT---GDIITLRPLRDFSSKEV-IYYNIFNDLSPVHV--------- 316
G RT ++ PLR+ E+ Y +F+ VHV
Sbjct: 232 EEEGESQPDGDGTKRTVTKKKLLIHHPLRETLRHELSTYARLFS----VHVGDRSFIPID 287
Query: 317 PSLATLADPLA------SLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
PS + P S++ + D++ +PS V+ V RT KL
Sbjct: 288 PSKSQTKQPAVVSHRSLSIEDVMTRYFADVELQYPSIVANVARTTGKL 335
>gi|303246570|ref|ZP_07332848.1| PP-loop domain protein [Desulfovibrio fructosovorans JJ]
gi|302491910|gb|EFL51788.1| PP-loop domain protein [Desulfovibrio fructosovorans JJ]
Length = 302
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + +C C ++ + A+ + M+ P +KVLVA SG S+A
Sbjct: 3 CKRCGETAAVKLPSHHAGFCPECFERFFKKQVETAIRRHGMILPGEKVLVAVSGGKDSLA 62
Query: 124 LLHLLQE 130
LL +L +
Sbjct: 63 LLRVLSD 69
>gi|15678698|ref|NP_275813.1| hypothetical protein MTH671 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621754|gb|AAB85176.1| unknown [Methanothermobacter thermautotrophicus str. Delta H]
Length = 226
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
Query: 112 LVAFSGSHSSMALLHLLQEGMQLSS-HKRILFSVCAIYIDDGSISQVSISERKANNAQIA 170
+VA GS LH++ + + + +LF V AI G IS+ S +I
Sbjct: 1 MVAVPGSEILSGALHVVSQSLLIPVIAGLLLFMVYAIVTLGGLISEYS--------GRIR 52
Query: 171 TAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQ 230
T +K +S + P+ + D ++P Q A ++I + SR+ L +
Sbjct: 53 TDVKELESAIKSISNPGTPEKIIEVVDSMDIPQSQKAVLTDIAGTAELGP--KSREALAR 110
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT 290
L +N L+AAK L +TD+ T++ + L G +P+ G + GDI T
Sbjct: 111 KLIENEELRAAKSLE---------KTDIVTRLGPTLGL-MGTLIPMGPGLAALGAGDINT 160
Query: 291 L 291
L
Sbjct: 161 L 161
>gi|338972038|ref|ZP_08627417.1| tRNA(Ile)-lysidine synthetase [Bradyrhizobiaceae bacterium SG-6C]
gi|338234932|gb|EGP10043.1| tRNA(Ile)-lysidine synthetase [Bradyrhizobiaceae bacterium SG-6C]
Length = 357
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 233 RQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLR 292
R LL +AAK + I TA TQ D A +I +S G G + DR GD++ +R
Sbjct: 118 RYRLLARAAKSCGASHILTAHTQDDQAETVIMRLSRGSGIAGLAAMARQTDR-GDVVLVR 176
Query: 293 PLRDFSSKEVI 303
P D ++
Sbjct: 177 PFLDVPKARLV 187
>gi|168213914|ref|ZP_02639539.1| ExsB family protein [Clostridium perfringens CPE str. F4969]
gi|170714588|gb|EDT26770.1| ExsB family protein [Clostridium perfringens CPE str. F4969]
Length = 244
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+ + ++ DK+ V SG S+ LLH+L+ + S K F + AI
Sbjct: 4 MQKLLSKTRQAIKEYNLIEDGDKIAVGLSGGKDSLTLLHILKNYQRFSPEK---FELIAI 60
Query: 148 YIDDGSISQVSISE 161
++ G + + E
Sbjct: 61 TLNPGGVDNSPLHE 74
>gi|414168769|ref|ZP_11424732.1| tRNA(Ile)-lysidine synthetase [Afipia clevelandensis ATCC 49720]
gi|410887505|gb|EKS35315.1| tRNA(Ile)-lysidine synthetase [Afipia clevelandensis ATCC 49720]
Length = 349
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 233 RQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLR 292
R LL++AAK + I TA TQ D A +I +S G G + DR GD++ R
Sbjct: 110 RYRLLVRAAKSCGASHILTAHTQDDQAETVIMRLSRGSGIAGLAAMARQTDR-GDVVLAR 168
Query: 293 PLRDFSSKEVI 303
P D ++
Sbjct: 169 PFLDVPKARLV 179
>gi|326437533|gb|EGD83103.1| tRNA 2-thiocytidine biosynthesis protein ttcA [Salpingoeca sp. ATCC
50818]
Length = 1135
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 91 LNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
LN F+A L K M+R D+VLV SG S+ LLH +++ + + + F + A +D
Sbjct: 867 LNPTFKA-LSKFDMIRDGDRVLVCVSGGKDSLTLLHTMKQAQYVFRAQGVRFELGAATVD 925
Query: 151 DGS 153
G+
Sbjct: 926 PGT 928
>gi|159904318|ref|YP_001551662.1| ATPase [Prochlorococcus marinus str. MIT 9211]
gi|159889494|gb|ABX09708.1| Predicted ATPase of the PP-loop superfamily implicated in cell
cycle control [Prochlorococcus marinus str. MIT 9211]
Length = 339
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 98/252 (38%), Gaps = 45/252 (17%)
Query: 111 VLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIA 170
+L++ SG SMALL L+ + +L K ++ + D G Q + QIA
Sbjct: 35 LLLSISGGQDSMALLKLIVDLRRLYEWKIFIW-----HGDHGWHKQ---------STQIA 80
Query: 171 TAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQ 230
T +K + C Q L +F + + + + +Y
Sbjct: 81 TGLKEW-----CNNQEL-----------------RFVSERATKEKIHSEQAARNWRYECL 118
Query: 231 TLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRT--GDI 288
T LL Q + C + T T TD A ++ N+S +G H+ RT G I
Sbjct: 119 TAHAQLLSQQNQSSPCHYVLTGHTSTDRAETLLLNLS--RGTHLSGLGSLKSSRTLSGQI 176
Query: 289 ITLRPLRDFSSKEVIYYNIFNDLSPVHV-PSLATLADPLASLQKAAESFVTDLQTNFPST 347
+RPL FS ++ DL PV + PS + + S + E + L+T P +
Sbjct: 177 KLVRPLLIFSREDTAQICKEMDL-PVWLDPSNSNMR---ISRNRIREEVIPVLETLHPGS 232
Query: 348 VSTVFRTADKLS 359
+ A++L
Sbjct: 233 TRRIASLAERLG 244
>gi|323143988|ref|ZP_08078642.1| PP-loop family protein [Succinatimonas hippei YIT 12066]
gi|322416237|gb|EFY06917.1| PP-loop family protein [Succinatimonas hippei YIT 12066]
Length = 290
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 87 LLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCA 146
L + L K A+G M+ P DKV+V SG S A+L LL + L FS+
Sbjct: 36 LFKRLRRKVGHAIGDYGMIEPDDKVMVCISGGKDSYAMLDLL---LSLKRSAPFPFSLIP 92
Query: 147 IYIDDG 152
+++D G
Sbjct: 93 VHLDPG 98
>gi|159463898|ref|XP_001690179.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284167|gb|EDP09917.1| predicted protein [Chlamydomonas reinhardtii]
Length = 187
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C T V+ R ++ C ACL + K R AL K++ P D + VA SG S+
Sbjct: 73 CYKCKTARAIVLGRQREAMCHACLELSVRGKVR-ALKTHKLLLPGDNIAVALSGGSCSLT 131
Query: 124 LL 125
LL
Sbjct: 132 LL 133
>gi|18309972|ref|NP_561906.1| hypothetical protein CPE0990 [Clostridium perfringens str. 13]
gi|110801239|ref|YP_695693.1| exoenzyme S synthesis protein B [Clostridium perfringens ATCC
13124]
gi|110801904|ref|YP_698381.1| PP-loop family protein [Clostridium perfringens SM101]
gi|168208060|ref|ZP_02634065.1| ExsB family protein [Clostridium perfringens E str. JGS1987]
gi|168211804|ref|ZP_02637429.1| ExsB family protein [Clostridium perfringens B str. ATCC 3626]
gi|169341156|ref|ZP_02863249.1| ExsB family protein [Clostridium perfringens C str. JGS1495]
gi|18144650|dbj|BAB80696.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|110675886|gb|ABG84873.1| ExsB family protein [Clostridium perfringens ATCC 13124]
gi|110682405|gb|ABG85775.1| PP-loop family protein [Clostridium perfringens SM101]
gi|169299763|gb|EDS81815.1| ExsB family protein [Clostridium perfringens C str. JGS1495]
gi|170660645|gb|EDT13328.1| ExsB family protein [Clostridium perfringens E str. JGS1987]
gi|170710238|gb|EDT22420.1| ExsB family protein [Clostridium perfringens B str. ATCC 3626]
Length = 244
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+ + ++ DK+ V SG S+ LLH+L+ + S K F + AI
Sbjct: 4 MQKLLSKTRQAIKEYNLIEDGDKIAVGLSGGKDSLTLLHILKNYQRFSPEK---FELIAI 60
Query: 148 YIDDGSISQVSISE 161
++ G + + E
Sbjct: 61 TLNPGGVDNSPLHE 74
>gi|422873892|ref|ZP_16920377.1| PP-loop family protein [Clostridium perfringens F262]
gi|380305125|gb|EIA17406.1| PP-loop family protein [Clostridium perfringens F262]
Length = 241
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+ + ++ DK+ V SG S+ LLH+L+ + S K F + AI
Sbjct: 1 MQKLLSKTRQAIKEYNLIEDGDKIAVGLSGGKDSLTLLHILKNYQRFSPEK---FELIAI 57
Query: 148 YIDDGSISQVSISE 161
++ G + + E
Sbjct: 58 TLNPGGVDNSPLHE 71
>gi|408399104|gb|EKJ78229.1| hypothetical protein FPSE_01690 [Fusarium pseudograminearum CS3096]
Length = 1460
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 397 YVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQI 450
Y TREQL+ + E P H + V+TDV Q +Q+ + V G++D+P QI
Sbjct: 841 YAHVLTREQLNQEL---EHPHHVNSVSTDVQQHETTQEHDAEDVPGAKDVPEQI 891
>gi|46124375|ref|XP_386741.1| hypothetical protein FG06565.1 [Gibberella zeae PH-1]
Length = 1500
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 397 YVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQI 450
Y TREQL+ + E P H + V+TDV Q +Q+ + V G++D+P QI
Sbjct: 840 YAHVLTREQLNQEL---EHPHHVNSVSTDVQQHETTQEHDAEDVPGAKDVPEQI 890
>gi|83314732|ref|XP_730488.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490225|gb|EAA22053.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 314
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 268 LGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
+G G ++PL + D+R II ++PL+D KE+ Y+ + D+ +
Sbjct: 96 IGNGINIPLCTSYIDNRYEPIIFIKPLKDLLDKEIYIYSFYKDIKYAY 143
>gi|168215907|ref|ZP_02641532.1| ExsB family protein [Clostridium perfringens NCTC 8239]
gi|182381767|gb|EDT79246.1| ExsB family protein [Clostridium perfringens NCTC 8239]
Length = 244
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
+Q L K R A+ + ++ DK+ V SG S+ LLH+L+ + S K F + AI
Sbjct: 4 MQKLLSKTRQAIKEYNLIEDGDKIAVGLSGGKDSLTLLHILKNYQRFSPEK---FELIAI 60
Query: 148 YIDDGSISQVSISE 161
++ G + + E
Sbjct: 61 TLNPGGVDNSPLHE 74
>gi|401417575|ref|XP_003873280.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489509|emb|CBZ24767.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 679
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 259 ATKIIANISLGKGAH-VPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVP 317
AT + + G G V GF T +++ LRPLR KE I Y ++ + P
Sbjct: 383 ATAALEALVTGAGGEGVVHGAGFRGF-THEVVCLRPLRTMLPKETIMYTRLCGIACSYTP 441
Query: 318 SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN 366
+L T S+ + E FV + T++ + + V T +L + ++
Sbjct: 442 ALCT-GTATRSIHRTLEQFVLTMMTSYRTMIFNVLNTVQRLEVHPAALQ 489
>gi|340522767|gb|EGR53000.1| predicted protein [Trichoderma reesei QM6a]
Length = 383
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 138/361 (38%), Gaps = 54/361 (14%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVA-FSGS 118
A + C RC N + L+++ AC L L + R + RP+ + VA S
Sbjct: 7 AGRPCLRCK--NPDAPYELRNV--AACQLTVLQRETRTS------SRPEPRRYVAGLSFG 56
Query: 119 HSSMALLHLL--QEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
SS L +L Q S F ++ID + S + +A + F
Sbjct: 57 PSSTVLTQILDKQAKYHASRKGSSPFEPLVVHIDTDLSNSSSSAADAPAQRLLAKYRERF 116
Query: 177 DSY-FTCLEQALEPDNMKLYT-DVAELPLEQFAKDSE-----INKMFQTVTTLSSRQYLL 229
+ F C+ + + L T D LP+ A E + F + +++SR L
Sbjct: 117 PNVSFECVHLS---KVLALKTIDWTALPIAASAAAGENDTERLRHFFDALPSVTSRADCL 173
Query: 230 QTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV----------- 278
+ ++LLL A + + + + + T LA+ ++ ++ G+G VP +
Sbjct: 174 RLFIRHLLLGVAMERSYSALLLGHSTTALASLTLSEVANGRGFAVPWQINDGAFTVCTYG 233
Query: 279 GFSDDRTG-----------DIITLRPLRDFSSKEVIYY----NIFNDLSPV-HVPSLATL 322
G S D G PLR+ EV+ Y DL P + S + +
Sbjct: 234 GRSADGDGAGAQDQDDGKVQFPVYYPLREILKAEVVTYLGTTPSVRDLVPADNSSSSSVV 293
Query: 323 ADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRA 382
+ S+++ + ++ + V+ V RTA KL ++S C LC LD
Sbjct: 294 SHKDQSIEEVMARYFEGVEGPYSGIVTNVVRTAGKLDRLVSS----RYCRLCGITLDEEG 349
Query: 383 D 383
D
Sbjct: 350 D 350
>gi|15642970|ref|NP_228012.1| hypothetical protein TM0197 [Thermotoga maritima MSB8]
gi|403252998|ref|ZP_10919303.1| hypothetical protein EMP_04440 [Thermotoga sp. EMP]
gi|418046133|ref|ZP_12684227.1| PP-loop domain protein [Thermotoga maritima MSB8]
gi|4980693|gb|AAD35289.1|AE001704_10 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351675686|gb|EHA58846.1| PP-loop domain protein [Thermotoga maritima MSB8]
gi|402811760|gb|EJX26244.1| hypothetical protein EMP_04440 [Thermotoga sp. EMP]
Length = 304
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 19/124 (15%)
Query: 64 CPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C V LR +I CK +++ + A+ K KM K+L+A SG S+
Sbjct: 3 CTKCG-KPASVKLRHYNIKLCKEHFNEFIEQRVEKAIKKFKMFGRNSKILIAVSGGKDSV 61
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV----SISERKAN----NAQIATAMK 174
+L H+L K++ + V A++I G V I E+ A I A +
Sbjct: 62 SLWHML---------KKLGYEVDALFIRAGKSGMVQKAQEIVEKNAELLNTKLHIVDATE 112
Query: 175 YFDS 178
YF
Sbjct: 113 YFGG 116
>gi|170758613|ref|YP_001785494.1| hypothetical protein CLK_3340 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405602|gb|ACA54013.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 240
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAI 147
++ L K R A+G +++ DK+ V SG S+ LLHLL++ S K F + AI
Sbjct: 1 MKKLLGKLRRAVGDFNLIQNGDKIAVGLSGGKDSIVLLHLLKKYQSFSPEK---FDLIAI 57
Query: 148 YIDDGSISQVSISERKANNAQI 169
+D + + S E +N +
Sbjct: 58 TLDTMTGADFSPLENVCSNINV 79
>gi|149194409|ref|ZP_01871506.1| hypothetical protein CMTB2_07406 [Caminibacter mediatlanticus TB-2]
gi|149135584|gb|EDM24063.1| hypothetical protein CMTB2_07406 [Caminibacter mediatlanticus TB-2]
Length = 262
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 78 LKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSH 137
+KDI+ + +++ G+ ++++ DKVL+A SG S LLH+L+ MQL +
Sbjct: 8 IKDIFFSKKVTKFVGR----VQGEFELIKENDKVLIALSGGKDSFVLLHVLKR-MQLIAP 62
Query: 138 KRILFSVCAIYIDDGS 153
+ F + AI ID G+
Sbjct: 63 FK--FDLAAITIDAGT 76
>gi|156848278|ref|XP_001647021.1| hypothetical protein Kpol_1050p20 [Vanderwaltozyma polyspora DSM
70294]
gi|226711430|sp|A7TER7.1|CTU1_VANPO RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|156117704|gb|EDO19163.1| hypothetical protein Kpol_1050p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 363
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 121/333 (36%), Gaps = 54/333 (16%)
Query: 59 RADKLCPRCNTNNGEVVLRLKDI--YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFS 116
+ +LC C++ ++ R K++ CK C + + + + ++V V S
Sbjct: 16 KVTQLCELCHSRKA-IIRRPKNLQKICKLCFFHVFETEIHETIVSNDLFYRGERVAVGAS 74
Query: 117 GSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
G S L ++L+ L+ + + ID+G + Y
Sbjct: 75 GGKDSTVLAYVLK---LLNERHDYGIEIVLLSIDEGIVG-------------------YR 112
Query: 177 DSYFTCLEQALEPDNMKLYTDVAELPLEQFAK----DSEINKMFQTVTTLSSRQYLLQTL 232
D +++ N + Y +LPLE F+ D ++ + +T +S Y L
Sbjct: 113 DDSLATVKR-----NQQQY----QLPLEIFSYQDLYDWTMDDIVETAGIRNSCTYC-GVL 162
Query: 233 RQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL- 291
R+ L + A KL + T D+A ++ NI G A + TG I
Sbjct: 163 RRQALDRGAAKLEIKHVVTGHNADDMAETVLMNILRGDVARLEKSTSIMTSSTGSPIKRS 222
Query: 292 RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTV 351
+P + KE++ Y + L + + T A + + A + + + PS + +
Sbjct: 223 KPFKYCYQKEIVLYAHYKKLD--YFSTECTYAP--EAFRGTARELMKNFEAIRPSCIIDI 278
Query: 352 FRTADKLSL----------DLTSMNVNNTCLLC 374
+ + L + + N N C C
Sbjct: 279 IASGESFVLKQKMGKQNKKKIITYNDGNRCERC 311
>gi|148269863|ref|YP_001244323.1| PP-loop domain-containing protein [Thermotoga petrophila RKU-1]
gi|147735407|gb|ABQ46747.1| PP-loop domain protein [Thermotoga petrophila RKU-1]
Length = 304
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 19/124 (15%)
Query: 64 CPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C V LR +I CK +++ + A+ K KM K+L+A SG S+
Sbjct: 3 CTKCG-KPASVKLRHYNIKLCKEHFNEFIEQRVEKAIKKFKMFGRNSKILIAVSGGKDSV 61
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQV----SISERKAN----NAQIATAMK 174
+L H+L K++ + V A++I G V I E+ A I A +
Sbjct: 62 SLWHML---------KKLGYEVDALFIRAGKSGMVQKAQEIVEKNAELLNTKLHIVDATE 112
Query: 175 YFDS 178
YF
Sbjct: 113 YFGG 116
>gi|313239749|emb|CBY14633.1| unnamed protein product [Oikopleura dioica]
Length = 771
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 42 NGDEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGK 101
N ++E T ++ V R K + + +NGE + K ++ L++ K A+ +
Sbjct: 462 NVEKECTDDVCVPCLLPRKKK--AKVDNSNGEKRKKRKAVHPPKVLMR----KVGDAIEE 515
Query: 102 SKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHK-RILFSVCAIYID 150
+M++ D+V+V SG SM LLH L + ++ H ++ F++ A+ +D
Sbjct: 516 FEMIKNGDRVIVGLSGGKDSMTLLHALLQYRHIAKHTLKMDFTIGALTVD 565
>gi|156100507|ref|XP_001615981.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804855|gb|EDL46254.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 589
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Query: 227 YLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
Y+ + + N +L+ + N + +++ K G G ++P+ + D+R
Sbjct: 310 YINELIIYNAILKYSIDENINYVLFGNNANNISNKSFLYTIFGNGINLPICTAYIDNRYK 369
Query: 287 DIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSL------ATLADPLASL--QKAAESFVT 338
+I ++PLRD +KE+ Y + +++ + S T+ + L+SL + S +
Sbjct: 370 NINFIKPLRDLLNKEIYIYCYYKNIAYLRNTSFDGNIVYRTINEMLSSLDSKNNTSSIIN 429
Query: 339 DLQTNFPSTVSTV 351
+ N + V+ V
Sbjct: 430 NTTGNLINMVNMV 442
>gi|70943587|ref|XP_741821.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520445|emb|CAH82072.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 340
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Query: 193 KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQ-----YLLQTLRQNLLLQAAKKLNCT 247
K+Y V L F K+ +K Q+ + + Y+ + + N +L+ K
Sbjct: 71 KIYFTV--LKSNYFIKEEHQDKFLQSYDVVKKEKSYYLNYINELIIYNNILKYCKDEQIN 128
Query: 248 KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNI 307
+ +++ K +G G ++PL + D+R I ++PL+D KE+ Y
Sbjct: 129 YVLWGNNANNISNKSFLYTIIGNGINIPLCTSYIDNRYEPIKFIKPLKDLLDKEIYIYAF 188
Query: 308 FNDL 311
+ D+
Sbjct: 189 YKDI 192
>gi|198424860|ref|XP_002119654.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 983
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 98 ALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
A+ KM++ +DKVLV SG S+++LH+L + + I F + A+ ID
Sbjct: 734 AINDFKMIKDKDKVLVCLSGGKDSLSMLHVLHQYQYQAGSNNIHFELGAVTID 786
>gi|150401224|ref|YP_001324990.1| PP-loop domain-containing protein [Methanococcus aeolicus Nankai-3]
gi|150013927|gb|ABR56378.1| PP-loop domain protein [Methanococcus aeolicus Nankai-3]
Length = 311
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 64 CPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C C TN R + +CK C ++Y+ + R +G+ + + ++V SG S+
Sbjct: 9 CSLCKTNPKIYYQRHSGLNFCKECFIKYILKRARKTIGRKNITKDMT-IIVGLSGGKDSL 67
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDG 152
+ H+L+E + + RI+ + +D+G
Sbjct: 68 VMAHVLKELYKPIPNTRII----GVMVDEG 93
>gi|154417532|ref|XP_001581786.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121916016|gb|EAY20800.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 275
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 94/229 (41%), Gaps = 43/229 (18%)
Query: 91 LNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYID 150
L ++ R A + ++ P D++L+ SG S+ L H L E M+ K F V A +I
Sbjct: 11 LRNQIRTACEEFHLVEPGDRILIGLSGGKDSLTLTHFLSELMR---EKNFAFKVVAAHI- 66
Query: 151 DGSISQVSISERKANNAQIATAMKYFDSYFTC--LEQALEPDNMKLYTDVAELPLEQFAK 208
K N +Y + +E L DN++ E+ LE K
Sbjct: 67 ------------KFKNLPYGIDAQYLQDFCESRQVEYHLVEDNIR------EVYLENDHK 108
Query: 209 DSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKIIANIS- 267
++ I+ SR R+ L++ A+ +C K+ D+ +I N++
Sbjct: 109 ETCIH---------CSR------FRRAKLMELARVFSCNKLTLGHHLDDIVATLIMNMTH 153
Query: 268 LGKGAH--VPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPV 314
G+ + V LD+ +++ ++ +RPL ++ + + N+ P
Sbjct: 154 HGRFSSMAVKLDITAGEEKY-NMTMIRPLAYTPELDIKQFCVENEFQPA 201
>gi|333977869|ref|YP_004515814.1| PP-loop domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821350|gb|AEG14013.1| PP-loop domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 309
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 66 RCNTNNGEVVLRLKDI---YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
RC GE V+ LK +C+ ++Y + A+ K KM+ +VLVA SG SM
Sbjct: 3 RCVKCKGESVINLKSTNAAFCQEHFIEYFLRQVARAIKKYKMLAEGQQVLVAVSGGKDSM 62
Query: 123 ALLHLL 128
AL L
Sbjct: 63 ALWDAL 68
>gi|428222947|ref|YP_007107117.1| tRNA(Ile)-lysidine synthetase [Synechococcus sp. PCC 7502]
gi|427996287|gb|AFY74982.1| tRNA(Ile)-lysidine synthetase [Synechococcus sp. PCC 7502]
Length = 318
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 46/101 (45%)
Query: 201 LPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLAT 260
L +++ A D + +T + + R +L + A++ NC + T T +D A
Sbjct: 70 LHVQKLATDWGVPFYLRTAKIQIESEAKAREWRYQMLAEMAREANCQVVVTGHTASDRAE 129
Query: 261 KIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKE 301
++ N+ G G +G+ + D+ +RPL + S +E
Sbjct: 130 TLLYNLVRGSGTDGLQSLGWQRPLSSDMQLVRPLLNISRQE 170
>gi|386394012|ref|ZP_10078793.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Desulfovibrio sp. U5L]
gi|385734890|gb|EIG55088.1| putative ATPase of the PP-loop superfamily implicated in cell cycle
control [Desulfovibrio sp. U5L]
Length = 312
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 64 CPRCNTNNGEV-VLRLKD---IYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSH 119
C RC GE+ V++L +C C + + A+ + M++P +KVLVA SG
Sbjct: 3 CKRC----GELAVVKLPSHHTGFCPDCFEMFFRKQVETAIRRHAMIKPGEKVLVAVSGGK 58
Query: 120 SSMALLHLLQE 130
S+AL+ +L +
Sbjct: 59 DSLALMRVLSD 69
>gi|395862052|ref|XP_003803283.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Otolemur
garnettii]
Length = 348
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 107/284 (37%), Gaps = 40/284 (14%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
C AC + + +++ P V V SG S L H+L+E LS R+
Sbjct: 26 CGACFCAAFEAEVLHTVLAGRLLPPNAVVAVGASGGKDSTVLAHVLRE---LS--PRLGI 80
Query: 143 SVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELP 202
S+ + +D+G R A A + ++ T + A D +T
Sbjct: 81 SLHLVAVDEGIGGY-----RDAALAAVKRQAARWELPLTIVAYA---DLFGGWT------ 126
Query: 203 LEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKKLNCTKIFTAETQTDLATKI 262
++ A+ + + ++ T LR+ L + A+++ T I T D+A +
Sbjct: 127 MDAVARSTAGSGRSRSCCTFCG------VLRRRALEEGARRVGATHIVTGHNADDMAETV 180
Query: 263 IANISLGKGAHVPLDVGFSDDRTGDIIT-LRPLRDFSSKEVIYYNIFNDL-----SPVHV 316
+ N G + G G + RPL+ S KEV+ Y F L V+
Sbjct: 181 LMNFLRGDAGRLARGGGLGSPGEGGALPRCRPLQFASQKEVVLYAHFRRLDYFSEECVYA 240
Query: 317 PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL 360
P + + A + L+ PS V + +A++L+L
Sbjct: 241 PE---------AFRGHARDLLKRLEAARPSAVLDLVHSAERLAL 275
>gi|340343971|ref|ZP_08667103.1| PP-loop domain protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519112|gb|EGP92835.1| PP-loop domain protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 304
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 93/250 (37%), Gaps = 34/250 (13%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C RC + C C + K + K M++ + V VA SG S+A
Sbjct: 3 CDRCENQAAYTRKYSGEKLCSRCFSSSIVRKTAKTISKYNMIQNNELVAVAVSGGKDSLA 62
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCL 183
LL ++ + + + F + AI ID+G N + KY C
Sbjct: 63 LLDIINQMTKTHN-----FRIKAITIDEGIPGY--------RNEALEIVQKY------CA 103
Query: 184 EQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQAAKK 243
+ +E Y ++ +L LE+ E K +S + TLR+ + AAK
Sbjct: 104 KLNVEHKVFS-YKELFDLTLEEALDLRESEK--------TSSCSICGTLRRRAIDHAAKD 154
Query: 244 LNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGF--SDDRTGDIITLRPLRDFSSKE 301
+ I T D + N+ G +G+ D+ + + ++P + E
Sbjct: 155 IGADVIATGHNLDDTLQTFVINMLSGD----TTKIGWMDPDNSSNTLRKIKPFCEIYESE 210
Query: 302 VIYYNIFNDL 311
+++Y ND+
Sbjct: 211 IVFYAFTNDI 220
>gi|374307419|ref|YP_005053850.1| tRNA(Ile)-lysidine synthase [Filifactor alocis ATCC 35896]
gi|291166567|gb|EFE28613.1| tRNA(Ile)-lysidine synthase [Filifactor alocis ATCC 35896]
Length = 466
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 91 LNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQE 130
L +K + ++ +++P++KV+VAFSG S+ LLHLL E
Sbjct: 3 LKNKVLETIRQNNLIQPKEKVIVAFSGGPDSVCLLHLLHE 42
>gi|345314618|ref|XP_003429531.1| PREDICTED: LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation
protein 1-like [Ornithorhynchus anatinus]
Length = 357
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 111/310 (35%), Gaps = 54/310 (17%)
Query: 63 LCPRCNTNNGEVVL-RLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
LC C + + + D C+ C + A + + ++ +V V SG S
Sbjct: 5 LCKACGASRASLRRPKTGDALCRTCFCATFEAEVLATVQGAGLLPAGQRVAVGASGGKDS 64
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDG-----SISQVSISERKANNAQIATAMKYF 176
L H+LQ +L++ + + + +D+G + +++ + A T + Y
Sbjct: 65 TVLAHVLQ---RLNTQHGLGLDLQLLAVDEGIAGYRDAALAAVTRQSARWGLPLTIVSYR 121
Query: 177 DSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNL 236
Y L D + L T N F V LR+
Sbjct: 122 QLYGWTL------DAIALQTG------------RRSNCTFCGV------------LRRQA 151
Query: 237 LLQAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT-LRPLR 295
L + A+ L +I T D+A ++ N G + G G + RPL+
Sbjct: 152 LERGARLLGADRIVTGHNADDMAETVLMNFLRGDAGRLARGGGLGSSGEGGALPRCRPLQ 211
Query: 296 DFSSKEVIYYNIFNDL-----SPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVST 350
KE++ Y F L V+ P + + A + + DL+ PS V
Sbjct: 212 FAYEKEIVLYAYFQGLDYFSTECVYAPD---------AFRGRARALLKDLEAARPSAVLD 262
Query: 351 VFRTADKLSL 360
+ +A++LSL
Sbjct: 263 LVHSAERLSL 272
>gi|210624190|ref|ZP_03294245.1| hypothetical protein CLOHIR_02201 [Clostridium hiranonis DSM 13275]
gi|210153177|gb|EEA84183.1| hypothetical protein CLOHIR_02201 [Clostridium hiranonis DSM 13275]
Length = 250
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 88 LQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVC 145
LQ L K R A+ +++ DK+ + SG SMALLH+L + S K L ++C
Sbjct: 6 LQNLLSKSRKAIQDFNLIQDGDKIAIGLSGGKDSMALLHVLSTYRRFSPEKFELMAIC 63
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.130 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,194,241,679
Number of Sequences: 23463169
Number of extensions: 277650562
Number of successful extensions: 740814
Number of sequences better than 100.0: 666
Number of HSP's better than 100.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 405
Number of HSP's that attempted gapping in prelim test: 739724
Number of HSP's gapped (non-prelim): 1016
length of query: 521
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 374
effective length of database: 8,910,109,524
effective search space: 3332380961976
effective search space used: 3332380961976
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)