Your job contains 1 sequence.
>psy3867
MGSKWLTQIYVECMTVLSESSLIVVNVMDPHPRACSKEQVLNGDEEITQNIRVVFSFSRA
DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS
SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYF
TCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRQYLLQTLRQNLLLQA
AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSK
EVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL
DLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHAS
KVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCY
ACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3867
(521 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q08B12 - symbol:ctu2-a "Cytoplasmic tRNA 2-thio... 375 8.8e-63 3
UNIPROTKB|Q32NV1 - symbol:ctu2-b "Cytoplasmic tRNA 2-thio... 374 1.4e-62 3
ZFIN|ZDB-GENE-040801-79 - symbol:ctu2 "cytosolic thiourid... 353 4.9e-57 3
UNIPROTKB|Q28ES8 - symbol:ctu2 "Cytoplasmic tRNA 2-thiola... 342 2.2e-55 3
UNIPROTKB|A0NEF7 - symbol:AGAP005651 "Cytoplasmic tRNA 2-... 438 2.6e-45 2
UNIPROTKB|Q2VPK5 - symbol:CTU2 "Cytoplasmic tRNA 2-thiola... 308 1.4e-44 3
UNIPROTKB|F1MJ97 - symbol:CTU2 "Cytoplasmic tRNA 2-thiola... 299 1.3e-43 3
MGI|MGI:1914215 - symbol:Ctu2 "cytosolic thiouridylase su... 302 2.5e-43 3
RGD|1562594 - symbol:Ctu2 "cytosolic thiouridylase subuni... 306 7.2e-43 3
UNIPROTKB|Q3SZG9 - symbol:CTU2 "Cytoplasmic tRNA 2-thiola... 293 9.0e-43 3
UNIPROTKB|B3NM45 - symbol:GG21627 "Cytoplasmic tRNA 2-thi... 425 2.8e-42 2
UNIPROTKB|H3BSW6 - symbol:CTU2 "Cytoplasmic tRNA 2-thiola... 308 2.3e-41 3
UNIPROTKB|F1PHC9 - symbol:CTU2 "Uncharacterized protein" ... 288 2.6e-40 3
UNIPROTKB|F1PHC8 - symbol:CTU2 "Uncharacterized protein" ... 288 2.2e-39 2
UNIPROTKB|B0X911 - symbol:CPIJ015900 "Cytoplasmic tRNA 2-... 420 2.3e-39 1
FB|FBgn0032793 - symbol:CG10189 species:7227 "Drosophila ... 415 7.8e-39 1
UNIPROTKB|B4M8J8 - symbol:GJ18095 "Cytoplasmic tRNA 2-thi... 389 2.2e-38 2
UNIPROTKB|B4I5W3 - symbol:GM17005 "Cytoplasmic tRNA 2-thi... 409 3.4e-38 1
UNIPROTKB|B4PAZ6 - symbol:GE12647 "Cytoplasmic tRNA 2-thi... 408 4.3e-38 1
UNIPROTKB|B4Q9Z1 - symbol:GD21754 "Cytoplasmic tRNA 2-thi... 405 8.9e-38 1
UNIPROTKB|B3MN57 - symbol:GF15629 "Cytoplasmic tRNA 2-thi... 404 1.1e-37 1
UNIPROTKB|B4KIW3 - symbol:GI19780 "Cytoplasmic tRNA 2-thi... 375 4.0e-37 2
UNIPROTKB|B4MYR2 - symbol:GK18201 "Cytoplasmic tRNA 2-thi... 390 3.5e-36 1
UNIPROTKB|Q17JB7 - symbol:AAEL002056 "Cytoplasmic tRNA 2-... 388 5.7e-36 1
UNIPROTKB|B4GWY0 - symbol:GL21098 "Cytoplasmic tRNA 2-thi... 382 2.4e-35 1
UNIPROTKB|J9NS19 - symbol:CTU2 "Uncharacterized protein" ... 256 3.0e-35 2
UNIPROTKB|Q29K59 - symbol:GA10142 "Cytoplasmic tRNA 2-thi... 378 6.5e-35 1
UNIPROTKB|B4JCV8 - symbol:GH10624 "Cytoplasmic tRNA 2-thi... 263 4.5e-33 3
UNIPROTKB|Q0UDH1 - symbol:NCS2 "Cytoplasmic tRNA 2-thiola... 246 1.6e-18 1
UNIPROTKB|F1NVI8 - symbol:F1NVI8 "Uncharacterized protein... 203 5.3e-18 2
DICTYBASE|DDB_G0268714 - symbol:ctu2 "cytosolic thiouridy... 244 1.0e-17 1
WB|WBGene00009256 - symbol:tut-2 species:6239 "Caenorhabd... 227 1.6e-16 1
UNIPROTKB|Q19906 - symbol:F29F11.3 "Cytoplasmic tRNA 2-th... 227 1.6e-16 1
UNIPROTKB|A7F190 - symbol:ncs2 "Cytoplasmic tRNA 2-thiola... 225 4.2e-16 1
UNIPROTKB|A2R475 - symbol:ncs2 "Cytoplasmic tRNA 2-thiola... 213 2.8e-15 2
UNIPROTKB|A8X8I6 - symbol:CBG09667 "Cytoplasmic tRNA 2-th... 204 8.8e-14 1
POMBASE|SPBC19C2.13c - symbol:ctu2 "cytosolic thiouridyla... 200 3.1e-13 1
UNIPROTKB|B2W6W8 - symbol:ncs2 "Cytoplasmic tRNA 2-thiola... 197 7.9e-13 1
UNIPROTKB|Q1DK31 - symbol:NCS2 "Cytoplasmic tRNA 2-thiola... 193 1.8e-12 2
UNIPROTKB|A1DDV3 - symbol:ncs2 "Cytoplasmic tRNA 2-thiola... 190 4.5e-12 1
UNIPROTKB|Q2U667 - symbol:ncs2 "Cytoplasmic tRNA 2-thiola... 188 7.1e-12 1
UNIPROTKB|Q6CF50 - symbol:NCS2 "Cytoplasmic tRNA 2-thiola... 186 1.4e-11 2
UNIPROTKB|A1CBI6 - symbol:ncs2 "Cytoplasmic tRNA 2-thiola... 174 3.0e-10 1
UNIPROTKB|B0Y1E7 - symbol:ncs2 "Cytoplasmic tRNA 2-thiola... 166 2.2e-09 1
UNIPROTKB|Q4WVK2 - symbol:ncs2 "Cytoplasmic tRNA 2-thiola... 166 2.2e-09 1
UNIPROTKB|A5DAK5 - symbol:NCS2 "Cytoplasmic tRNA 2-thiola... 149 5.2e-08 2
UNIPROTKB|A5DSD3 - symbol:NCS2 "Cytoplasmic tRNA 2-thiola... 102 7.2e-08 2
UNIPROTKB|A6QYX4 - symbol:NCS2 "Cytoplasmic tRNA 2-thiola... 141 1.3e-06 1
UNIPROTKB|Q5FW05 - symbol:ctu1 "Cytoplasmic tRNA 2-thiola... 105 3.4e-06 2
UNIPROTKB|Q05AW7 - symbol:ctu1 "Cytoplasmic tRNA 2-thiola... 101 1.9e-05 2
TAIR|locus:2125359 - symbol:AT4G35910 "AT4G35910" species... 132 9.0e-05 2
UNIPROTKB|Q28ZC1 - symbol:GA20807 "Cytoplasmic tRNA 2-thi... 92 0.00012 2
ASPGD|ASPL0000062742 - symbol:AN0062 species:162425 "Emer... 121 0.00014 1
UNIPROTKB|B4NN33 - symbol:GK22963 "Cytoplasmic tRNA 2-thi... 90 0.00016 2
UNIPROTKB|B4LM02 - symbol:GJ21203 "Cytoplasmic tRNA 2-thi... 86 0.00017 2
CGD|CAL0001191 - symbol:orf19.4399 species:5476 "Candida ... 123 0.00020 1
UNIPROTKB|Q59ZY9 - symbol:NCS2 "Cytoplasmic tRNA 2-thiola... 123 0.00020 1
UNIPROTKB|A3M0F4 - symbol:NCS2 "Cytoplasmic tRNA 2-thiola... 122 0.00025 1
UNIPROTKB|B4GHY8 - symbol:GL16852 "Cytoplasmic tRNA 2-thi... 89 0.00025 2
ZFIN|ZDB-GENE-040426-704 - symbol:ctu1 "cytosolic thiouri... 112 0.00033 2
UNIPROTKB|B4KLL0 - symbol:GI19452 "Cytoplasmic tRNA 2-thi... 87 0.00034 2
UNIPROTKB|B4P3W7 - symbol:GE22576 "Cytoplasmic tRNA 2-thi... 87 0.00034 2
UNIPROTKB|B3MI77 - symbol:GF12710 "Cytoplasmic tRNA 2-thi... 85 0.00069 2
FB|FBgn0033375 - symbol:CG8078 species:7227 "Drosophila m... 84 0.00090 2
>UNIPROTKB|Q08B12 [details] [associations]
symbol:ctu2-a "Cytoplasmic tRNA 2-thiolation protein 2 A"
species:8355 "Xenopus laevis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
GO:GO:0034227 EMBL:BC097664 EMBL:BC124921 RefSeq:NP_001167511.1
UniGene:Xl.3616 ProteinModelPortal:Q08B12 GeneID:100381163
KEGG:xla:100381163 CTD:348180 Xenbase:XB-GENE-6466467
HOVERGEN:HBG107783 KO:K14169 InterPro:IPR019407 Pfam:PF10288
Uniprot:Q08B12
Length = 512
Score = 375 (137.1 bits), Expect = 8.8e-63, Sum P(3) = 8.8e-63
Identities = 77/211 (36%), Positives = 128/211 (60%)
Query: 193 KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTA 252
K+Y P + + ++ ++F + TL+++ A+ +K+ T
Sbjct: 207 KMYQSTCSHPPDMHTQ--KLKQLFASAKTLTAKQQLLHTLRSHLILHIARTCGYSKVMTG 264
Query: 253 ETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLS 312
E+ T L+ ++++N+SLG+GA +PLD GF D R GD+ +RP+R++SSKE+ YYN F ++S
Sbjct: 265 ESCTRLSIRLLSNVSLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSSKEIAYYNRFFNVS 324
Query: 313 PVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN----VN 368
P+ +P+L T A +S+Q E FV LQ +FPSTVST++RT++KL++ +
Sbjct: 325 PIFIPALDTKASENSSIQHLTEVFVNRLQADFPSTVSTLYRTSEKLNVSKIDADQETCAK 384
Query: 369 NTCLLCKAPLDTRADLASSSMGATRFSRYVS 399
+ CLLC +PLDT+A AS+ AT+ S ++S
Sbjct: 385 DRCLLCLSPLDTQAGKASA-FSATQLSHHLS 414
Score = 219 (82.2 bits), Expect = 8.8e-63, Sum P(3) = 8.8e-63
Identities = 39/113 (34%), Positives = 74/113 (65%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K+C +C ++ +++R D +CK+C +Y HKFRA LGK++++ P +KVL+A+SG SS
Sbjct: 23 KICMKCKESSAALLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAYSGGPSS 82
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK 174
A++ +QEG+ + K++ F ++ID+G+ +S ER+ ++I + ++
Sbjct: 83 SAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQILSEICSVLQ 135
Score = 77 (32.2 bits), Expect = 8.8e-63, Sum P(3) = 8.8e-63
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 432 SQDIPEKS---VNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKD 488
SQ IP KS N S+ Q G + ++ + P + LCY+C+ VKD
Sbjct: 414 SQKIPMKSNDLANNSDKSCCQGGQGCKEAGYGDTCQSRALQTP-SFVHMLCYSCRLTVKD 472
Query: 489 MTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
M S + + +L + EM +I++FLL
Sbjct: 473 MQSLDVLPQYVLHEAEHRCHRTEMRKEIQEFLL 505
Score = 40 (19.1 bits), Expect = 4.4e-44, Sum P(3) = 4.4e-44
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 13 CMTVLSESSLIVVNVMDPHPRACSKEQVLNGDEEITQNIRVVF 55
CM S+ +++ D ++C KE ++ RV++
Sbjct: 25 CMKCKESSAALLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIY 67
>UNIPROTKB|Q32NV1 [details] [associations]
symbol:ctu2-b "Cytoplasmic tRNA 2-thiolation protein 2 B"
species:8355 "Xenopus laevis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
GO:GO:0034227 HOVERGEN:HBG107783 InterPro:IPR019407 Pfam:PF10288
EMBL:BC070752 EMBL:BC108465 UniGene:Xl.85791
ProteinModelPortal:Q32NV1 Xenbase:XB-GENE-5732109 Uniprot:Q32NV1
Length = 512
Score = 374 (136.7 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 76/211 (36%), Positives = 128/211 (60%)
Query: 193 KLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTA 252
K+Y P + + ++ ++F + TL+++ A+ +K+ T
Sbjct: 207 KMYQSTCSRPPDMHTQ--KLKQLFASAKTLTAKQQLLHTLRSHLILHIARTCGYSKVMTG 264
Query: 253 ETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLS 312
E+ T L+ ++++N+SLG+GA +PLD GF D R GD+ +RP+R++SSKE+ YYN F ++
Sbjct: 265 ESCTRLSIRLLSNVSLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSSKEIAYYNRFFNVL 324
Query: 313 PVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMN----VN 368
P+ +P+L T A +S+Q E FV LQ +FPSTVST++RT++KL++ + +
Sbjct: 325 PIFIPALDTKASENSSIQHLTEVFVNRLQADFPSTVSTLYRTSEKLNVSIIDADQETCAK 384
Query: 369 NTCLLCKAPLDTRADLASSSMGATRFSRYVS 399
+ CLLC +PLDT+A AS+ AT+ S ++S
Sbjct: 385 DRCLLCLSPLDTQAGKASA-FSATQLSHHLS 414
Score = 219 (82.2 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 39/113 (34%), Positives = 74/113 (65%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K+C +C ++ +++R D +CK+C +Y HKFRA LGK++++ P +KVL+A+SG SS
Sbjct: 23 KICMKCKESSAALLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAYSGGPSS 82
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK 174
A++ +QEG+ + K++ F ++ID+G+ +S ER+ ++I + ++
Sbjct: 83 SAMVRQVQEGLSRDAPKKLRFVPGILFIDEGTACGMSWEERQQILSEICSVLQ 135
Score = 76 (31.8 bits), Expect = 1.4e-62, Sum P(3) = 1.4e-62
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 432 SQDIPEKS---VNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKD 488
SQ IP KS N S+ Q G + ++ + P + LCY+C+ VKD
Sbjct: 414 SQKIPMKSNDLANNSDKSCCQGGQGCKEAGYGDTCQSRALQTP-SFVHMLCYSCRLTVKD 472
Query: 489 MTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
M S + + +L + EM +I++FLL
Sbjct: 473 MQSLDVLPQYVLHEAEYRCHRTEMRKEIQEFLL 505
Score = 40 (19.1 bits), Expect = 7.2e-44, Sum P(3) = 7.2e-44
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 13 CMTVLSESSLIVVNVMDPHPRACSKEQVLNGDEEITQNIRVVF 55
CM S+ +++ D ++C KE ++ RV++
Sbjct: 25 CMKCKESSAALLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIY 67
>ZFIN|ZDB-GENE-040801-79 [details] [associations]
symbol:ctu2 "cytosolic thiouridylase subunit 2
homolog (S. pombe)" species:7955 "Danio rerio" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0034227 "tRNA thio-modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0002098 "tRNA
wobble uridine modification" evidence=ISS] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
UniPathway:UPA00988 ZFIN:ZDB-GENE-040801-79 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 CTD:348180
HOVERGEN:HBG107783 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 HOGENOM:HOG000007287 OrthoDB:EOG4QRH41
EMBL:BC078233 IPI:IPI00499495 RefSeq:NP_001003560.1
UniGene:Dr.80746 ProteinModelPortal:Q6DC53 PRIDE:Q6DC53
GeneID:445166 KEGG:dre:445166 InParanoid:Q6DC53 NextBio:20831928
ArrayExpress:Q6DC53 Uniprot:Q6DC53
Length = 501
Score = 353 (129.3 bits), Expect = 4.9e-57, Sum P(3) = 4.9e-57
Identities = 84/228 (36%), Positives = 131/228 (57%)
Query: 198 VAELPLEQFAKDSE----INKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAE 253
VA+L LE A E + ++F ++ TLS++ A++ + +K+ E
Sbjct: 196 VAQLNLEDSAYLPEHKLALQRLFSSLKTLSAKQEMLQTLRQHLILHVARENSYSKVMMGE 255
Query: 254 TQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSP 313
+ + LA K+++NI+LG+GA + D GFSD R GD++ +RP+RD+SSKE+ +YN +
Sbjct: 256 SCSRLAVKLLSNIALGRGAALASDTGFSDPRFGDVVIVRPMRDYSSKEITFYNRMFHVPS 315
Query: 314 VHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL------DLTSMNV 367
V +P L T + AS+Q+ ESFVT+LQ +FPSTVST++RT++KL T
Sbjct: 316 VFIPGLDTKSHDKASIQRLTESFVTNLQADFPSTVSTIYRTSEKLHTVRPPQSQSTEPEP 375
Query: 368 NNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSES 415
+ CLLC LDT AD AS+ AT S +S ++ S +++ S
Sbjct: 376 ASKCLLCLCALDTTADKASA-FHATLISEQLSQLRLQEGSVDLVAGSS 422
Score = 225 (84.3 bits), Expect = 4.9e-57, Sum P(3) = 4.9e-57
Identities = 47/135 (34%), Positives = 78/135 (57%)
Query: 35 CSKEQVLNGDEEITQNIRVVFSFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK 94
C E+ NG E + I V S ++ C +C +++R+ D +C++C +Y HK
Sbjct: 2 CQVEEDYNGLECNQEKIPV----SGLNRKCMKCKEGTAVLIIRVSDAFCRSCFKEYFIHK 57
Query: 95 FRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSI 154
FRA LGK++++ PQ+KVL+A SG +S +L +QEG+ + K++ F +YIDDG
Sbjct: 58 FRAMLGKNRVIFPQEKVLLAVSGGAASCTMLSQVQEGLSRDAPKKLRFMPGIVYIDDGGA 117
Query: 155 SQVSISERKANNAQI 169
S ER+ + +Q+
Sbjct: 118 CGRSEDERQTSISQL 132
Score = 74 (31.1 bits), Expect = 4.9e-57, Sum P(3) = 4.9e-57
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 473 NLQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+L+ LCY+C+ VKDM + + IL + + + ++M+ +I ++LL
Sbjct: 448 DLKTLLCYSCRLTVKDMAAVNTLPPYILTEAEKRQRRSQMKVEISEYLL 496
Score = 55 (24.4 bits), Expect = 2.7e-39, Sum P(3) = 2.7e-39
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 12 ECMTVLSESSLIVVNVMDPHPRACSKEQVLNGDEEITQNIRVVF 55
+CM ++++++ V D R+C KE ++ + RV+F
Sbjct: 26 KCMKCKEGTAVLIIRVSDAFCRSCFKEYFIHKFRAMLGKNRVIF 69
>UNIPROTKB|Q28ES8 [details] [associations]
symbol:ctu2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 GO:GO:0034227 CTD:348180
HOVERGEN:HBG107783 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 HOGENOM:HOG000007287 GeneTree:ENSGT00390000008797
EMBL:CR762362 EMBL:BC089700 EMBL:BC167302 EMBL:BC170700
EMBL:BC170702 RefSeq:NP_001034829.1 UniGene:Str.6323
ProteinModelPortal:Q28ES8 Ensembl:ENSXETT00000024569 GeneID:548371
KEGG:xtr:548371 Xenbase:XB-GENE-5732028 InParanoid:Q5FVY8
Bgee:Q28ES8 Uniprot:Q28ES8
Length = 516
Score = 342 (125.4 bits), Expect = 2.2e-55, Sum P(3) = 2.2e-55
Identities = 76/220 (34%), Positives = 126/220 (57%)
Query: 184 EQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKK 243
E + E D K++ P + + ++ ++F + TL+++ A+
Sbjct: 203 ESSRESD--KMFQSTCRHPPDTHTQ--KLIQLFASAKTLTAKHQLLHTLRSHLILHIART 258
Query: 244 LNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVI 303
+K+ + E+ T L+ +++NISLG+GA +PLD GF D R GD+ +RP+R++S KE+
Sbjct: 259 CGYSKVMSGESCTRLSVSLLSNISLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSLKEIA 318
Query: 304 YYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLT 363
+YN +S V +P+L T +S+Q+ +E F+ LQ +FPSTVSTV+RT++KL++
Sbjct: 319 FYNRLFHVSSVFIPALNTKVLENSSIQQLSEVFINRLQADFPSTVSTVYRTSEKLNVSKI 378
Query: 364 SMN----VNNTCLLCKAPLDTRADLASSSMGATRFSRYVS 399
N CLLC +PLDT+ AS+ AT+ S Y+S
Sbjct: 379 DANQGTCAKERCLLCLSPLDTQVGEASA-FHATQISHYIS 417
Score = 240 (89.5 bits), Expect = 2.2e-55, Sum P(3) = 2.2e-55
Identities = 49/141 (34%), Positives = 81/141 (57%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
K C +C ++ +++R D +CK+C +Y HKFRA LGK++++ P +KVL+AFSG SS
Sbjct: 23 KTCMKCKESSAVLLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAFSGGPSS 82
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSY 179
A++ +QEGM + K++ F ++ID+G+ +S ER+ N +++ ++ F Y
Sbjct: 83 SAMVQQVQEGMSRDAPKKLRFVPGILFIDEGTTCGMSHEERQQNMSEVQNVLQQTGFPFY 142
Query: 180 FTCLEQALEPDNMKLYTDVAE 200
LEQ L V E
Sbjct: 143 IVSLEQVFSLPGSILQRGVPE 163
Score = 70 (29.7 bits), Expect = 2.2e-55, Sum P(3) = 2.2e-55
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 478 LCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
LCY C+ VKD+ S + + +L + EM +I +FLL
Sbjct: 465 LCYGCRLTVKDLQSLDALPQYVLHEAEHRSRRIEMRKEIEEFLL 508
Score = 44 (20.5 bits), Expect = 6.3e-21, Sum P(3) = 6.3e-21
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 395 SRYVSNATREQLSHVIISSESPDHASKVTT 424
++ + N++ +QLS V I+ D S V+T
Sbjct: 336 TKVLENSSIQQLSEVFINRLQADFPSTVST 365
Score = 42 (19.8 bits), Expect = 9.6e-35, Sum P(3) = 9.6e-35
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 13 CMTVLSESSLIVVNVMDPHPRACSKEQVLNGDEEITQNIRVVF 55
CM S+++++ D ++C KE ++ RV++
Sbjct: 25 CMKCKESSAVLLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIY 67
>UNIPROTKB|A0NEF7 [details] [associations]
symbol:AGAP005651 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7165 "Anopheles gambiae" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629
HOGENOM:HOG000112056 OMA:MCSIGED OrthoDB:EOG4W3R3F
EMBL:AAAB01008960 RefSeq:XP_001237692.2
EnsemblMetazoa:AGAP005651-RA GeneID:4576742
KEGG:aga:AgaP_AGAP005651 VectorBase:AGAP005651 CTD:4576742
PhylomeDB:A0NEF7 Uniprot:A0NEF7
Length = 417
Score = 438 (159.2 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 109/376 (28%), Positives = 187/376 (49%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
++LC +CNT + L K+ C+ C L Y+ HKFRA+LG +K++R +VL+ +G +
Sbjct: 30 NELCRKCNTEQAVLKLNQKEPQCRVCFLNYVRHKFRASLGSTKIVRRGSRVLIILTGEPA 89
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSIS--ERKANNAQIATAMKYFDS 178
++ LL +++ G++ + K++ +Y+DD + S + ++ A Q+ + F +
Sbjct: 90 NVTLLDMVRFGLEQDAFKQLRIVPVLLYVDDDFVGNTSEARLQQLAERLQVFKQFESFPA 149
Query: 179 YFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXX 238
Y+T + ++ L D A P ++ + ++ V ++SS+
Sbjct: 150 YYTVCGSSR---HVALTFDGAFSPAGFEQDEARLLQVLDAVRSVSSKQDLLEQVRKQTYR 206
Query: 239 XAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFS 298
L C +F ++ DLA +++N++LG+G + DV F DDR + +RP+RD +
Sbjct: 207 QIGHALQCAYVFLSDIGVDLAKTLLSNVALGRGCSLAQDVAFCDDRYNTVKLVRPIRDLN 266
Query: 299 SKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
EV Y +++ P+ S A + SLQ F+ +L +FPSTVSTV+RT DKL
Sbjct: 267 PDEVSNYLQYSE-QPLLSYSPAKHFEDKPSLQNLTAKFIDNLMQSFPSTVSTVYRTGDKL 325
Query: 359 SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDH 418
D N C C A LD R S ++ AT +SR VS+ SH I +S
Sbjct: 326 --DAPKAARNECCRFCGAALDYRG---SKTLFATEYSRLVSSRINAACSHEDILLKS--- 377
Query: 419 ASKVTTDVNQTVGSQD 434
++ D + V +D
Sbjct: 378 -KQMELDAERAVNGED 392
Score = 55 (24.4 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 460 EKVSRTEDNEGPDN-LQRSLCYACQYVVKDM 489
E+ ED++G + L + LC+ C+ + +D+
Sbjct: 385 ERAVNGEDDQGEERVLMKQLCHGCRNIFEDL 415
>UNIPROTKB|Q2VPK5 [details] [associations]
symbol:CTU2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:9606 "Homo sapiens" [GO:0002098 "tRNA wobble uridine
modification" evidence=NAS] [GO:0034227 "tRNA thio-modification"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
UniPathway:UPA00988 GO:GO:0005739 GO:GO:0043234 GO:GO:0002098
GO:GO:0034227 CTD:348180 HOVERGEN:HBG107783 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629
HOGENOM:HOG000007287 EMBL:AC138028 EMBL:BC021829 EMBL:BC080540
EMBL:BC108659 EMBL:BC121805 EMBL:BC125269 EMBL:BC157881
IPI:IPI00455719 IPI:IPI00554765 IPI:IPI00848327
RefSeq:NP_001012777.1 RefSeq:NP_001012780.1 UniGene:Hs.592074
ProteinModelPortal:Q2VPK5 DIP:DIP-48633N STRING:Q2VPK5
PhosphoSite:Q2VPK5 DMDM:121941955 PRIDE:Q2VPK5
Ensembl:ENST00000312060 Ensembl:ENST00000378384
Ensembl:ENST00000453996 GeneID:348180 KEGG:hsa:348180
UCSC:uc002flm.3 UCSC:uc002fln.3 GeneCards:GC16P088773
H-InvDB:HIX0018098 HGNC:HGNC:28005 HPA:HPA041135 HPA:HPA041894
neXtProt:NX_Q2VPK5 PharmGKB:PA165449882 OMA:LCYSCRV ChiTaRS:CTU2
GenomeRNAi:348180 NextBio:99363 ArrayExpress:Q2VPK5 Bgee:Q2VPK5
CleanEx:HS_C16orf84 Genevestigator:Q2VPK5 Uniprot:Q2VPK5
Length = 515
Score = 308 (113.5 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 69/194 (35%), Positives = 112/194 (57%)
Query: 207 AKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANI 266
A+ ++++F +V TL+++ A+ +K+ T ++ T LA K++ N+
Sbjct: 220 AQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNL 279
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
+LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V P++ T A
Sbjct: 280 ALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEK 339
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKL---SLDLTSMNVNNT-CLLCKAPLDTRA 382
AS+ + E+F+ LQT FPSTVSTV+RT++KL D + + CLLC LD A
Sbjct: 340 ASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDA 399
Query: 383 DLASSSMGATRFSR 396
++++ GA SR
Sbjct: 400 ADSATAFGAQTSSR 413
Score = 206 (77.6 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 49/162 (30%), Positives = 83/162 (51%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-- 175
SS +++ + EG+ S KR+ F I++D+G+ S+ ER A++ ++
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDEGAACGQSLEERSKTLAEVKPILQATG 141
Query: 176 FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
F + LE+ L+ EL + A + ++ Q
Sbjct: 142 FPWHVVALEEVFSLPPSVLWCSAQELVGSEGAYKAAVDSFLQ 183
Score = 51 (23.0 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 464 RTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGILKKC-LQEKSLNEMEDQIRDFLL 521
R ED + ++ LCY+C+ +KD+ S + IL + L+ + +++ IRD L+
Sbjct: 450 RREDPQAC--IEEQLCYSCRVNMKDLPSLDPLPPYILAEAQLRTQRAWGLQE-IRDCLI 505
>UNIPROTKB|F1MJ97 [details] [associations]
symbol:CTU2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:9913 "Bos taurus" [GO:0043234 "protein complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] UniPathway:UPA00988 GO:GO:0005737
GO:GO:0043234 GO:GO:0008033 InterPro:IPR019407 Pfam:PF10288
IPI:IPI00706786 UniGene:Bt.88215 GeneTree:ENSGT00390000008797
OMA:LCYSCRV EMBL:DAAA02046253 Ensembl:ENSBTAT00000032535
Uniprot:F1MJ97
Length = 501
Score = 299 (110.3 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 68/200 (34%), Positives = 109/200 (54%)
Query: 207 AKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANI 266
A+ ++++F +V TL+++ A+ +K+ T ++ T LA K++ ++
Sbjct: 214 AQTQALSRLFDSVKTLTAKEELLQTLRTHLILHVARNHGYSKVMTGDSCTRLAIKLMTSL 273
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
+LG+GA + D GFSD+R GD++ +RP+R+ + KEV +YN + + P+L T A
Sbjct: 274 ALGRGAFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFAVPSICTPALDTKAPEK 333
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNNTCLLCKAPLDTRADLA 385
AS+ + E+F+ LQ FPSTVSTV+RT++KL CLLC LD D A
Sbjct: 334 ASIHRLMEAFILRLQAQFPSTVSTVYRTSEKLVKAPRAGCAAGPRCLLCMCTLDV--DTA 391
Query: 386 SSSMGATRFSRYVSNATREQ 405
S AT F S+ + Q
Sbjct: 392 DS---ATAFGAQTSHLPQMQ 408
Score = 197 (74.4 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 46/137 (33%), Positives = 76/137 (55%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
D+ C +C VV+R D +C+ C HKFRA LGKS+++ P +KVL+A+SG S
Sbjct: 25 DQKCVKCKEGLPVVVIRAGDAFCRDCFKALYVHKFRAMLGKSRLIFPGEKVLLAWSGGPS 84
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDS 178
S +++ + EG+ S KR+ F +YID+G+ S +R A++ A++ F
Sbjct: 85 SSSMVWQVLEGLSRDSAKRLRFVPGVVYIDEGAACGQSPEDRARTLAEVKLALQTTGFPW 144
Query: 179 YFTCLEQ--ALEPDNMK 193
+ LE+ +L P ++
Sbjct: 145 HAVALEEVFSLPPSALR 161
Score = 61 (26.5 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 474 LQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ LCY C+ +KD+ S + + IL + E +IR++LL
Sbjct: 442 VMEQLCYGCRVNMKDLPSLELLPPYILSEAQLRSQRATAEQEIREYLL 489
>MGI|MGI:1914215 [details] [associations]
symbol:Ctu2 "cytosolic thiouridylase subunit 2 homolog (S.
pombe)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043234 "protein
complex" evidence=ISO] UniPathway:UPA00988 MGI:MGI:1914215
GO:GO:0005829 GO:GO:0043234 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 CTD:348180 HOVERGEN:HBG107783 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629
HOGENOM:HOG000007287 OrthoDB:EOG4QRH41 GeneTree:ENSGT00390000008797
OMA:LCYSCRV EMBL:AK090349 EMBL:AK154995 EMBL:BC036332
IPI:IPI00553257 RefSeq:NP_722470.2 UniGene:Mm.482288
ProteinModelPortal:Q3U308 PhosphoSite:Q3U308 PaxDb:Q3U308
PRIDE:Q3U308 Ensembl:ENSMUST00000116412 GeneID:66965 KEGG:mmu:66965
UCSC:uc009nsz.2 InParanoid:Q3U308 NextBio:323147 Bgee:Q3U308
CleanEx:MM_2310061F22RIK Genevestigator:Q3U308 Uniprot:Q3U308
Length = 514
Score = 302 (111.4 bits), Expect = 2.5e-43, Sum P(3) = 2.5e-43
Identities = 71/212 (33%), Positives = 115/212 (54%)
Query: 184 EQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKK 243
E L P + + + A P A+ ++++F ++ TL+++ A+
Sbjct: 205 EARLHPSHGREPSGTAGYPTA--AQTEALSRLFSSIKTLTAKEELLQTLRTHLIVHIARV 262
Query: 244 LNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVI 303
K+ T ET T LA K++ N++LG+GA + D GFSD+R GD++ +RP+RD + KEV
Sbjct: 263 HGYCKVMTGETCTRLAIKLMTNLALGRGAFLAWDTGFSDERHGDVVLVRPMRDHTLKEVA 322
Query: 304 YYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL--- 360
+YN + V P++ T A AS+ + E+F+ LQT FPSTVSTV+RT++KL
Sbjct: 323 FYNHLFRVPSVFTPAIDTKAPEKASIHRLMEAFILRLQTLFPSTVSTVYRTSEKLVKAPR 382
Query: 361 -DLTSMNVNNTCLLCKAPLDTRADLASSSMGA 391
+ +CLLC LD ++++ GA
Sbjct: 383 EGCAAGPSGPSCLLCMCALDIDTADSATAFGA 414
Score = 196 (74.1 bits), Expect = 2.5e-43, Sum P(3) = 2.5e-43
Identities = 48/163 (29%), Positives = 86/163 (52%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+++SG
Sbjct: 23 SREQK-CVKCAEGLPVVVIRAGDAFCRVCFKAFYVHKFRAMLGKNRVIFPGEKVLLSWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-- 175
SS +++ + EG+ S KR+ F IY+D+G+ S+ +R+ A++ ++
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVPGVIYVDEGAACGQSLEDRQKTVAEVKRILENTG 141
Query: 176 FDSYFTCLEQALE-PDNMKLYTDVAELPLEQFAKDSEINKMFQ 217
F + LE+ P ++ T E+ K + +++ Q
Sbjct: 142 FPWHVVALEEVFSLPPSVLCCTSQESAGTEEAYK-AAVDRFLQ 183
Score = 57 (25.1 bits), Expect = 2.5e-43, Sum P(3) = 2.5e-43
Identities = 10/48 (20%), Positives = 25/48 (52%)
Query: 474 LQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ LCY+C+ +KD+ S + +L + + ++I+++L+
Sbjct: 460 ITEQLCYSCRVNMKDLPSLDPLPPYVLAEAQLRSQRGSVSEEIQEYLI 507
>RGD|1562594 [details] [associations]
symbol:Ctu2 "cytosolic thiouridylase subunit 2 homolog (S.
pombe)" species:10116 "Rattus norvegicus" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0034227 "tRNA thio-modification" evidence=ISS]
[GO:0043234 "protein complex" evidence=IEA;ISO] UniPathway:UPA00988
RGD:1562594 GO:GO:0005829 GO:GO:0043234 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 CTD:348180 HOVERGEN:HBG107783 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629
HOGENOM:HOG000007287 OrthoDB:EOG4QRH41 EMBL:BC079393 EMBL:BC089862
EMBL:BC107464 IPI:IPI00464506 RefSeq:NP_001032171.1
UniGene:Rn.20640 PhosphoSite:Q3B7U4 PRIDE:Q3B7U4 GeneID:292069
KEGG:rno:292069 UCSC:RGD:1562594 InParanoid:Q3B7U4 NextBio:633692
ArrayExpress:Q3B7U4 Genevestigator:Q3B7U4 Uniprot:Q3B7U4
Length = 528
Score = 306 (112.8 bits), Expect = 7.2e-43, Sum P(3) = 7.2e-43
Identities = 73/204 (35%), Positives = 113/204 (55%)
Query: 207 AKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANI 266
A+ ++++F+++ TL+++ A+ K+ T E+ T LA K++ N+
Sbjct: 221 AQTEALSRLFKSIKTLTAKEELLQTLRTHLTVHVARSHGYRKVMTGESCTRLAIKLMTNL 280
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
+LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V P++ T A
Sbjct: 281 ALGRGAFLAWDTGFSDERHGDVVLVRPMRDHTLKEVAFYNRLFGVPSVFTPAIDTKAPEK 340
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLD-----LTSMNVNNTCLLCKAPLDT- 380
AS+ + E+F+ LQT FPSTVSTV+RT++KL T + N CLLC LD
Sbjct: 341 ASIHRLMEAFILKLQTLFPSTVSTVYRTSEKLVKAPREGCATGPSGPN-CLLCMCALDVD 399
Query: 381 RADLASSSMGATRFSRYVSNATRE 404
AD A++ GA S T E
Sbjct: 400 NADSATA-FGAQSSSHLSQMLTAE 422
Score = 188 (71.2 bits), Expect = 7.2e-43, Sum P(3) = 7.2e-43
Identities = 40/112 (35%), Positives = 66/112 (58%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+++SG
Sbjct: 23 SREQK-CVKCAEGLPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRVIFPGEKVLLSWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQI 169
SS +++ + EG+ S KR+ F IY+D+G+ S+ +R A++
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVPGVIYVDEGAACGQSLEDRVKTLAEV 133
Score = 57 (25.1 bits), Expect = 7.2e-43, Sum P(3) = 7.2e-43
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 453 GMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEM 512
G + + V R ED + LCY+C+ +KD+ S + +L + +
Sbjct: 436 GQTQSCHRAVGRREDAWAC--IIEQLCYSCRVNMKDLPSLDPLPPYVLTEAQLRSQRGSV 493
Query: 513 EDQIRDFLL 521
++I+++L+
Sbjct: 494 SEEIQEYLI 502
>UNIPROTKB|Q3SZG9 [details] [associations]
symbol:CTU2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:9913 "Bos taurus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0000049 "tRNA binding" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 CTD:348180
HOVERGEN:HBG107783 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 EMBL:BC102862 IPI:IPI00706786
RefSeq:NP_001030521.1 UniGene:Bt.88215 ProteinModelPortal:Q3SZG9
PRIDE:Q3SZG9 GeneID:614194 KEGG:bta:614194 HOGENOM:HOG000007287
InParanoid:Q3SZG9 OrthoDB:EOG4QRH41 NextBio:20898985 Uniprot:Q3SZG9
Length = 501
Score = 293 (108.2 bits), Expect = 9.0e-43, Sum P(3) = 9.0e-43
Identities = 67/200 (33%), Positives = 108/200 (54%)
Query: 207 AKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANI 266
A+ ++++ +V TL+++ A+ +K+ T ++ T LA K++ ++
Sbjct: 214 AQTQALSRLIDSVKTLTAKEELLQTLRTHLILHVARNHGYSKVMTGDSCTRLAIKLMTSL 273
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
+LG+GA + D GFSD+R GD++ +RP+R+ + KEV +YN + + P+L T A
Sbjct: 274 ALGRGAFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFAVPSICTPALDTKAPEK 333
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNNTCLLCKAPLDTRADLA 385
AS+ + E+F+ LQ FPSTVSTV+RT++KL CLLC LD D A
Sbjct: 334 ASIHRLMEAFILRLQAQFPSTVSTVYRTSEKLVKAPRAGCAAGPRCLLCMCTLDV--DTA 391
Query: 386 SSSMGATRFSRYVSNATREQ 405
S AT F S+ + Q
Sbjct: 392 DS---ATAFGAQTSHLPQMQ 408
Score = 197 (74.4 bits), Expect = 9.0e-43, Sum P(3) = 9.0e-43
Identities = 46/137 (33%), Positives = 76/137 (55%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
D+ C +C VV+R D +C+ C HKFRA LGKS+++ P +KVL+A+SG S
Sbjct: 25 DQKCVKCKEGLPVVVIRAGDAFCRDCFKALYVHKFRAMLGKSRLIFPGEKVLLAWSGGPS 84
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDS 178
S +++ + EG+ S KR+ F +YID+G+ S +R A++ A++ F
Sbjct: 85 SSSMVWQVLEGLSRDSAKRLRFVPGVVYIDEGAACGQSPEDRARTLAEVKLALQTTGFPW 144
Query: 179 YFTCLEQ--ALEPDNMK 193
+ LE+ +L P ++
Sbjct: 145 HAVALEEVFSLPPSALR 161
Score = 61 (26.5 bits), Expect = 9.0e-43, Sum P(3) = 9.0e-43
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 474 LQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ LCY C+ +KD+ S + + IL + E +IR++LL
Sbjct: 442 VMEQLCYGCRVNMKDLPSLELLPPYILSEAQLRSQRATAEQEIREYLL 489
>UNIPROTKB|B3NM45 [details] [associations]
symbol:GG21627 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7220 "Drosophila erecta" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 EMBL:CH954179 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 OrthoDB:EOG4W3R3F
RefSeq:XP_001974245.1 EnsemblMetazoa:FBtr0141681 GeneID:6549283
KEGG:der:Dere_GG21627 FlyBase:FBgn0113805 Uniprot:B3NM45
Length = 404
Score = 425 (154.7 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 113/344 (32%), Positives = 177/344 (51%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+GE+ L + C+ C L Y HKFRAALG +K++ +VL+ GS S+
Sbjct: 34 CSKCDVNSGELYKLNFRAAECRECFLTYARHKFRAALGAAKILPRNAEVLLVLDGSAKSL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY--FDSYF 180
LL +L + KR+ + +Y+++ QV + A ++ +++Y FD Y
Sbjct: 94 VLLDMLHFAQTQNQFKRLHCNARVVYVEE---QQVQDRDPVDLEALLSLSVQYAPFDFYV 150
Query: 181 TCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXA 240
L Q +K Y+ + A + I+K+ Q + +L++R
Sbjct: 151 IELGQGCSLQRIKDYSPSLK------ANNELIHKL-QKLQSLTARQDYLQQQRKNLICSV 203
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSS 299
A+ L CT +F DLAT+++ I+LG+GA LDV DDR +GD+ LRPL+D S
Sbjct: 204 AQSLQCTHVFEPNISVDLATQLLTAIALGRGASAALDVALLDDRLSGDVKLLRPLKDLSE 263
Query: 300 KEVIYYNIFNDLSPVHVPS--LATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK 357
+E+ +Y L P+ P ASLQ +FV +LQ N+ STVSTVFRT DK
Sbjct: 264 QEIQFYIHAQRLKPLFQSGSHYGMERGPTASLQNLTSAFVANLQHNYASTVSTVFRTGDK 323
Query: 358 LSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
++++ S TC+ C++ LD+ S ++ A +SR VS A
Sbjct: 324 IAVN--SDPEQATCVHCQSALDSEL---SDTLLAIEYSRSVSEA 362
Score = 39 (18.8 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 474 LQRSLCYACQYVVKDMTS 491
+Q LC+AC+ + ++ S
Sbjct: 383 MQDGLCHACRAIQAELES 400
>UNIPROTKB|H3BSW6 [details] [associations]
symbol:CTU2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] UniPathway:UPA00988
GO:GO:0005737 GO:GO:0008033 InterPro:IPR019407 Pfam:PF10288
EMBL:AC138028 HGNC:HGNC:28005 ChiTaRS:CTU2
ProteinModelPortal:H3BSW6 SMR:H3BSW6 PRIDE:H3BSW6
Ensembl:ENST00000567949 Bgee:H3BSW6 Uniprot:H3BSW6
Length = 586
Score = 308 (113.5 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 69/194 (35%), Positives = 112/194 (57%)
Query: 207 AKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANI 266
A+ ++++F +V TL+++ A+ +K+ T ++ T LA K++ N+
Sbjct: 291 AQTEALSQLFCSVRTLTAKEELLQTLRTHLILHMARAHGYSKVMTGDSCTRLAIKLMTNL 350
Query: 267 SLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPL 326
+LG+GA + D GFSD+R GD++ +RP+RD + KEV +YN + V P++ T A
Sbjct: 351 ALGRGAFLAWDTGFSDERHGDVVVVRPMRDHTLKEVAFYNRLFSVPSVFTPAVDTKAPEK 410
Query: 327 ASLQKAAESFVTDLQTNFPSTVSTVFRTADKL---SLDLTSMNVNNT-CLLCKAPLDTRA 382
AS+ + E+F+ LQT FPSTVSTV+RT++KL D + + CLLC LD A
Sbjct: 411 ASIHRLMEAFILRLQTQFPSTVSTVYRTSEKLVKGPRDGPAAGDSGPRCLLCMCALDVDA 470
Query: 383 DLASSSMGATRFSR 396
++++ GA SR
Sbjct: 471 ADSATAFGAQTSSR 484
Score = 182 (69.1 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 38/107 (35%), Positives = 64/107 (59%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
SR K C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG
Sbjct: 23 SREQK-CVKCKEAQPVVVIRAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSG 81
Query: 118 SHSSMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKA 164
SS +++ + EG+ S KR+ F I++D+ + ++++ R A
Sbjct: 82 GPSSSSMVWQVLEGLSQDSAKRLRFVAGVIFVDERTPGVLTVALRSA 128
Score = 51 (23.0 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 464 RTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGILKKC-LQEKSLNEMEDQIRDFLL 521
R ED + ++ LCY+C+ +KD+ S + IL + L+ + +++ IRD L+
Sbjct: 521 RREDPQAC--IEEQLCYSCRVNMKDLPSLDPLPPYILAEAQLRTQRAWGLQE-IRDCLI 576
>UNIPROTKB|F1PHC9 [details] [associations]
symbol:CTU2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] UniPathway:UPA00988
GO:GO:0005737 GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729
InterPro:IPR019407 Pfam:PF10288 GeneTree:ENSGT00390000008797
OMA:LCYSCRV EMBL:AAEX03003966 EMBL:AAEX03003967 EMBL:AAEX03003968
EMBL:AAEX03003965 Ensembl:ENSCAFT00000031625 Uniprot:F1PHC9
Length = 510
Score = 288 (106.4 bits), Expect = 2.6e-40, Sum P(3) = 2.6e-40
Identities = 60/181 (33%), Positives = 102/181 (56%)
Query: 212 INKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKG 271
++++F +V TL+++ A+ +K+ T ++ T LA K++ +++LG+G
Sbjct: 224 LSRLFDSVKTLTAKEELLQTLRGHLLLHVARTHGYSKVMTGDSCTRLAIKLMTSLALGRG 283
Query: 272 AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK 331
A + D GFSD+R GD++ +RP+R+ + KEV +YN + + P++ T A AS+ +
Sbjct: 284 AFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFAVPSIFTPAIDTKAPEKASIHR 343
Query: 332 AAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNNTCLLCKAPLDTRADLASSSMG 390
E F+ LQ FPSTVSTV+RT++KL CLLC LD ++++ G
Sbjct: 344 LMEGFLLRLQAQFPSTVSTVYRTSEKLVKAPRDGCAAGPRCLLCMCSLDVDTADSATAFG 403
Query: 391 A 391
A
Sbjct: 404 A 404
Score = 189 (71.6 bits), Expect = 2.6e-40, Sum P(3) = 2.6e-40
Identities = 38/113 (33%), Positives = 64/113 (56%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 28 CVKCKDGLPVVVIRAGDAFCRDCFRAFYVHKFRAVLGKNRLIFPGEKVLLAWSGGPSSSS 87
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
++ + EG+ S KR+ F +Y+D+G+ S R A++ ++ F
Sbjct: 88 MVWQVLEGLSRDSAKRLRFVPGVVYVDEGAACGQSWENRAKTLAEVKLILRSF 140
Score = 53 (23.7 bits), Expect = 2.6e-40, Sum P(3) = 2.6e-40
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 423 TTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYAC 482
T D +QT + E ++ + + + R ED++ + LCY C
Sbjct: 406 TQDFSQTQPPTPLAEAGAAPMPCCSAEVGRAQKCCQSTLLCRREDSQ----VIEQLCYGC 461
Query: 483 QYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ +KD+ S + IL + Q +S +D I+++L+
Sbjct: 462 RVNMKDVPSLDSLPPYILAEA-QFRSQRPSQD-IQEYLV 498
>UNIPROTKB|F1PHC8 [details] [associations]
symbol:CTU2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] UniPathway:UPA00988
GO:GO:0005737 GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729
InterPro:IPR019407 Pfam:PF10288 GeneTree:ENSGT00390000008797
EMBL:AAEX03003966 EMBL:AAEX03003967 EMBL:AAEX03003968
EMBL:AAEX03003965 Ensembl:ENSCAFT00000031626 Uniprot:F1PHC8
Length = 431
Score = 288 (106.4 bits), Expect = 2.2e-39, Sum P(2) = 2.2e-39
Identities = 60/181 (33%), Positives = 102/181 (56%)
Query: 212 INKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKG 271
++++F +V TL+++ A+ +K+ T ++ T LA K++ +++LG+G
Sbjct: 223 LSRLFDSVKTLTAKEELLQTLRGHLLLHVARTHGYSKVMTGDSCTRLAIKLMTSLALGRG 282
Query: 272 AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK 331
A + D GFSD+R GD++ +RP+R+ + KEV +YN + + P++ T A AS+ +
Sbjct: 283 AFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFAVPSIFTPAIDTKAPEKASIHR 342
Query: 332 AAESFVTDLQTNFPSTVSTVFRTADKL-SLDLTSMNVNNTCLLCKAPLDTRADLASSSMG 390
E F+ LQ FPSTVSTV+RT++KL CLLC LD ++++ G
Sbjct: 343 LMEGFLLRLQAQFPSTVSTVYRTSEKLVKAPRDGCAAGPRCLLCMCSLDVDTADSATAFG 402
Query: 391 A 391
A
Sbjct: 403 A 403
Score = 189 (71.6 bits), Expect = 2.2e-39, Sum P(2) = 2.2e-39
Identities = 38/113 (33%), Positives = 64/113 (56%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 27 CVKCKDGLPVVVIRAGDAFCRDCFRAFYVHKFRAVLGKNRLIFPGEKVLLAWSGGPSSSS 86
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
++ + EG+ S KR+ F +Y+D+G+ S R A++ ++ F
Sbjct: 87 MVWQVLEGLSRDSAKRLRFVPGVVYVDEGAACGQSWENRAKTLAEVKLILRSF 139
>UNIPROTKB|B0X911 [details] [associations]
symbol:CPIJ015900 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7176 "Culex quinquefasciatus" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629
HOGENOM:HOG000112056 OMA:MCSIGED OrthoDB:EOG4W3R3F EMBL:DS232513
RefSeq:XP_001866133.1 EnsemblMetazoa:CPIJ015900-RA GeneID:6049355
KEGG:cqu:CpipJ_CPIJ015900 VectorBase:CPIJ015900 PhylomeDB:B0X911
Uniprot:B0X911
Length = 425
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 121/404 (29%), Positives = 205/404 (50%)
Query: 61 DKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHS 120
++LC +C N + L LK+ C+ C L Y+ HKFRA+LG +K++R +VLV FSGS
Sbjct: 34 EELCRKCTVNPSVLKLNLKEPQCRECFLHYVRHKFRASLGATKIVRRGSRVLVVFSGSAE 93
Query: 121 SMALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFD--S 178
++ +L +++ G+Q S K++ +++ + + + ER + +K F+ S
Sbjct: 94 NVVMLDMIRYGLQQESFKKLRIEPVVVFVSEDHVGRED-GERVGVVQEKVRILKQFEFRS 152
Query: 179 YFTCLEQALEPDNMKLYTDVAELPLEQFAKD-SEINKMFQTVTTLSSRXXXXXXXXXXXX 237
YF+ + A E + + ++L LE+++++ + NK+ + +S+
Sbjct: 153 YFSVIG-AKEC----VAVEDSDL-LERYSEERARFNKILSGFKSATSKQDFIVQNRKQTL 206
Query: 238 XXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDF 297
AK+L+C +F ++ DLA +++N++LG+G + LD+ F DDR +RP+RD
Sbjct: 207 KVIAKRLDCPYVFLSDIGLDLAKTLLSNVALGRGRSLALDIAFCDDRDEQHKIIRPMRDL 266
Query: 298 SSKEVIYY--NIFNDLSPVHVPSLATLADPLA---SLQKAAESFVTDLQTNFPSTVSTVF 352
+ E+ Y + N+LS + TL DP SLQ FV LQ +PSTVSTVF
Sbjct: 267 NPDEIENYLKHADNELSYI------TLEDPFKDKPSLQNLTCKFVDGLQRTYPSTVSTVF 320
Query: 353 RTADKLSL-------------DLTSM-------NVNNTCLLCKAPLDTRADL-ASSSMGA 391
RT DK+S DL S+ N ++T + CK + D S+++ A
Sbjct: 321 RTGDKMSCETVKPTAENDDDQDLLSLFDQSLRLNSSSTSVRCKF-CHSALDFHGSTTLFA 379
Query: 392 TRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDI 435
T FSR VS+ +LSH I S ++ D + V +++
Sbjct: 380 TEFSRMVSSRINVELSHEAIVESS----KRMEEDARRRVNGEEV 419
>FB|FBgn0032793 [details] [associations]
symbol:CG10189 species:7227 "Drosophila melanogaster"
[GO:0002098 "tRNA wobble uridine modification" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 EMBL:AE014134 GO:GO:0000049
GO:GO:0002098 GO:GO:0034227 KO:K14169 InterPro:IPR019407
Pfam:PF10288 eggNOG:NOG308629 OMA:MCSIGED OrthoDB:EOG4W3R3F
GeneTree:ENSGT00390000008797 EMBL:BT046166 EMBL:AY118308
RefSeq:NP_609975.1 ProteinModelPortal:Q9VIV3 IntAct:Q9VIV3
MINT:MINT-971081 PaxDb:Q9VIV3 PRIDE:Q9VIV3
EnsemblMetazoa:FBtr0081284 EnsemblMetazoa:FBtr0331327 GeneID:35234
KEGG:dme:Dmel_CG10189 UCSC:CG10189-RA FlyBase:FBgn0032793
InParanoid:Q9VIV3 PhylomeDB:Q9VIV3 GenomeRNAi:35234 NextBio:792514
Bgee:Q9VIV3 Uniprot:Q9VIV3
Length = 405
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 109/343 (31%), Positives = 179/343 (52%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+GE+ L + C+ C L Y HKFRAALG +K++ +VL+ GS S+
Sbjct: 34 CSKCDVNSGELYKLNFRTAECRECFLAYARHKFRAALGAAKILPRNAEVLLVLDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ + +Y+++ + + +A +++T FD Y
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCNARVVYVEEQQVQGRDPVDLEALQ-RLSTQYAPFDFYV-- 150
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAK 242
+E P +++ D + P A + I+K+ Q + +L++R A+
Sbjct: 151 IELGALPSSLQRIKDYS--PFLN-ANNELIHKL-QKLRSLTARQDYLQQQRKNLICSVAQ 206
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSKE 301
L CT +F + DLAT+++ I+LG+G LDV DDR +GD+ LRPL+D + +E
Sbjct: 207 CLQCTHVFESNISVDLATQLLTAIALGRGGSAALDVALLDDRLSGDVKLLRPLKDLTEQE 266
Query: 302 VIYYNIFNDLSPVHVPSLATLA---DPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
+ +Y L P H + ASLQ +FV +LQ NF STVSTVFRT DK+
Sbjct: 267 IQFYIHAQRLKP-HFQKGSRYGMEHGETASLQNLTSAFVANLQQNFASTVSTVFRTGDKI 325
Query: 359 SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
+++ S ++C+ C++ LD+ S ++ A +SR VS A
Sbjct: 326 AVN--SNPEQSSCVHCRSTLDSEL---SDTLLAIEYSRSVSEA 363
>UNIPROTKB|B4M8J8 [details] [associations]
symbol:GJ18095 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7244 "Drosophila virilis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
EMBL:CH940654 GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629 OMA:MCSIGED
OrthoDB:EOG4W3R3F RefSeq:XP_002057451.1 ProteinModelPortal:B4M8J8
EnsemblMetazoa:FBtr0234020 GeneID:6634299 KEGG:dvi:Dvir_GJ18095
FlyBase:FBgn0205260 InParanoid:B4M8J8 Uniprot:B4M8J8
Length = 400
Score = 389 (142.0 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 110/339 (32%), Positives = 166/339 (48%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C N+ E+ L + C C L Y HKFRAALG +K + +VL+ GS S+
Sbjct: 34 CNKCGLNSLELYKLNFRAAECHQCFLSYARHKFRAALGAAKALPRNAEVLLLVDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ S ++ID +Q S SE +Y F
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCSARVLHID----AQSSPSENDPLPMLNELRERYAPFEFYV 149
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAK 242
++ E ++KL D + L DS NK+ +L++R A
Sbjct: 150 IQLGAEVHSLKLLKDYSASRL-----DSTDNKL----RSLTARQDYVRQQRKRLIGAVAL 200
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRT-GDIITLRPLRDFSSKE 301
+L CT +F + LA +++ +++LG+G V LDV DDR G + LRPL+D + +E
Sbjct: 201 QLQCTHVFEPSISSSLAAQLLTSVALGRGGSVALDVALLDDRLQGAVTLLRPLKDLNEQE 260
Query: 302 VIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLD 361
V +Y L P + L+D ASLQ +FV +LQ N+ STVSTVFRT DK++
Sbjct: 261 VQFYIKAQQLKPFRSDESSLLSD--ASLQNLTSAFVANLQLNYASTVSTVFRTGDKIAAK 318
Query: 362 LTSMNVN-NTCLLCKAPLDTRADLASSSMGATRFSRYVS 399
+ +TC LC++ LD+ S ++ A +SR VS
Sbjct: 319 RQPIEEGPSTCALCQSDLDSGL---SDTLLAIEYSRAVS 354
Score = 38 (18.4 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 473 NLQRSLCYACQYVVKDMT 490
N +LC+AC+ + ++T
Sbjct: 378 NSMDNLCHACRNIHAELT 395
>UNIPROTKB|B4I5W3 [details] [associations]
symbol:GM17005 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7238 "Drosophila sechellia" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 OrthoDB:EOG4W3R3F EMBL:CH480822
RefSeq:XP_002039123.1 EnsemblMetazoa:FBtr0199990 GeneID:6614696
KEGG:dse:Dsec_GM17005 FlyBase:FBgn0171918 Uniprot:B4I5W3
Length = 405
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 108/342 (31%), Positives = 176/342 (51%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+GE+ L + C+ C L Y HKFRAALG +K++ +VL+ GS S+
Sbjct: 34 CSKCDVNSGELYKLNFRTAECRECFLAYARHKFRAALGAAKILPRNAEVLLVLDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ + +Y+++ + +A ++T FD Y
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCNARVVYVEEQKVQGRDPVHLEALQ-NLSTQYAPFDFYV-- 150
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAK 242
+E P +M+ D + L A + I+K+ Q + +L++R A+
Sbjct: 151 IELGALPSSMQRIKDYSP-SLN--ANNELIHKL-QKLRSLTARQDYLQQQRKNLICSVAQ 206
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSKE 301
L CT +F + DLAT+++ I+LG+G LDV DDR +GD+ LRPL+D + +E
Sbjct: 207 CLQCTHVFESNISVDLATQLLTAIALGRGGSAALDVALLDDRLSGDVKLLRPLKDLNEQE 266
Query: 302 VIYYNIFNDLSPVHVPSLATLAD--PLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
+ +Y L P+ + ASLQ +FV +LQ N+ STVSTVFRT DK++
Sbjct: 267 IQFYIHAQRLKPLFEKGSCFGREHGQTASLQNLTSAFVANLQQNYASTVSTVFRTGDKIA 326
Query: 360 LDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
+ S ++C+ C++ LD+ S ++ A +SR VS A
Sbjct: 327 AN--SNPEQSSCVHCRSTLDSEI---SDTLLAIEYSRTVSEA 363
>UNIPROTKB|B4PAZ6 [details] [associations]
symbol:GE12647 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7245 "Drosophila yakuba" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 EMBL:CM000158 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629 OrthoDB:EOG4W3R3F
RefSeq:XP_002090713.1 EnsemblMetazoa:FBtr0259165 GeneID:6529720
KEGG:dya:Dyak_GE12647 FlyBase:FBgn0230375 Uniprot:B4PAZ6
Length = 404
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 108/345 (31%), Positives = 178/345 (51%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+ E+ L ++ C+ C L Y HKFRAALG +K++ +VL+ GS S+
Sbjct: 34 CSKCDVNSNELYKLNFREAECRECFLAYARHKFRAALGAAKILPRNAEVLLVLDGSAKSL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQ---VSISERKANNAQIATAMKYFDSY 179
LL +L ++ KR+ +V +Y+++ + V + + + + Q A F+ Y
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCNVHVVYVEEQHVQDRDPVGLEDLLSVSRQYAP----FEFY 149
Query: 180 FTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXX 239
L Q +K Y+ + A + I K+ Q + +L++R
Sbjct: 150 VIELGQGCSLQRIKDYSPSLK------ANNELIYKL-QKLQSLTARQDYLQQHRKNLICS 202
Query: 240 AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFS 298
A+ L+CT +F + DLAT+++ I+LG+GA LDV DDR +GD+ LRPL+D S
Sbjct: 203 VAQSLHCTHVFESNISVDLATQLLTAIALGRGASAALDVALLDDRLSGDVKLLRPLKDLS 262
Query: 299 SKEVIYYNIFNDLSPV--HVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
+E+ +Y L P+ + AS+Q +FV +LQ N+ STVSTVFRT D
Sbjct: 263 EQEITFYIHAQRLKPLFQNGSHYGMERGQTASIQNLTSAFVANLQQNYASTVSTVFRTGD 322
Query: 357 KLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
K++++ S +C+ C++ LD+ S ++ A +SR VS A
Sbjct: 323 KIAVN--SNPEQASCVHCRSALDSEL---SDTLLAIEYSRSVSEA 362
>UNIPROTKB|B4Q9Z1 [details] [associations]
symbol:GD21754 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7240 "Drosophila simulans" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 OrthoDB:EOG4W3R3F EMBL:CM000361
RefSeq:XP_002079936.1 EnsemblMetazoa:FBtr0221664 GeneID:6732823
KEGG:dsi:Dsim_GD21754 FlyBase:FBgn0193176 Uniprot:B4Q9Z1
Length = 405
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 108/342 (31%), Positives = 175/342 (51%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C+ N+ E+ L + C+ C L Y HKFRAALG +K++ +VL+ GS S+
Sbjct: 34 CSKCDVNSDELYKLNFRTAECRECFLAYARHKFRAALGAAKILPRNAEVLLVLDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ KR+ + +Y+++ + +A ++T FD Y
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCNARVVYVEEQQVQGRDPVHLEALQ-NLSTQYAPFDFYV-- 150
Query: 183 LEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAK 242
+E P +M+ D + L A + I+K+ Q + +L++R A+
Sbjct: 151 IELGALPSSMQRIKDYSP-SLN--ANNELIHKL-QKLRSLTARQDYLQQQRKNLICSVAQ 206
Query: 243 KLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSKE 301
L CT +F + DLAT+++ I+LG+G LDV DDR +GD+ LRPL+D + +E
Sbjct: 207 CLRCTHVFESNISVDLATQLLTAIALGRGGSAALDVALLDDRLSGDVKLLRPLKDLNEQE 266
Query: 302 VIYYNIFNDLSPVHVPSLATLAD--PLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
+ +Y L P+ + ASLQ +FV +LQ N+ STVSTVFRT DK++
Sbjct: 267 IQFYIHAQRLKPLFQKGSRYGREHGQTASLQNLTSAFVANLQQNYASTVSTVFRTGDKIA 326
Query: 360 LDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
+ S ++C+ C++ LDT S ++ A +SR VS A
Sbjct: 327 AN--SNPEQSSCVHCRSTLDTEL---SDTLLAIEYSRSVSEA 363
>UNIPROTKB|B3MN57 [details] [associations]
symbol:GF15629 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7217 "Drosophila ananassae" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
EMBL:CH902620 GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629 OrthoDB:EOG4W3R3F
RefSeq:XP_001962814.1 EnsemblMetazoa:FBtr0120329 GeneID:6498435
KEGG:dan:Dana_GF15629 FlyBase:FBgn0092653 InParanoid:B3MN57
Uniprot:B3MN57
Length = 403
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 125/388 (32%), Positives = 197/388 (50%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQD-KVLVAFSGSHSS 121
C +C+ ++ E+ L + C+ C L Y+ HKFRAALG +K++ P+D +VL+ GS S
Sbjct: 34 CSKCDISSDELFQLNFRTPECRDCFLAYVRHKFRAALGAAKVL-PRDAEVLLVVDGSAES 92
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFT 181
+ LL +L ++ KR+ S +Y++D + ++ ++ A ++ + F+ Y
Sbjct: 93 LVLLDMLYYAQTQNTFKRLHCSARMVYLEDQPVQGRDPADLESLEA-LSKRYEAFEFYVI 151
Query: 182 CLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAA 241
L L ++KL D + P+ Q + + I K+ Q + +L+SR A
Sbjct: 152 TL--GLPVGSLKLLKDYS--PVAQESNEL-IQKLSQ-LRSLTSRQDYLQQQRKNLIASVA 205
Query: 242 KKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSK 300
+KL+C+ +F + DLAT+++ +I+LG+G LDV DDR I LRPL+D + +
Sbjct: 206 QKLHCSHVFNSSISVDLATQLLTSIALGRGGSAALDVALLDDRLAAGIKLLRPLKDLTEQ 265
Query: 301 EVIYYNIFNDLSPVHVPSLA---TLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK 357
EV +Y L P+ + S L D ASLQ +FV +LQ NF STVSTVFRT K
Sbjct: 266 EVQFYVHAQRLQPLLMASSRYGQELGDA-ASLQNLTSAFVANLQKNFSSTVSTVFRTGGK 324
Query: 358 LSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPD 417
+S + T C C++ LD S ++ A +SR VS A +L+ I E P+
Sbjct: 325 IS-ESTHPE-QAKCNHCQSALDVEL---SDTLLAIEYSRSVSEAG-VRLNEAI---EDPE 375
Query: 418 HASKVTTDVNQTV--GSQDIPEKSVNGS 443
SK +N + I NGS
Sbjct: 376 IISKRRMKLNDELCHACSSIEADFKNGS 403
>UNIPROTKB|B4KIW3 [details] [associations]
symbol:GI19780 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7230 "Drosophila mojavensis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
EMBL:CH933807 GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 OrthoDB:EOG4W3R3F
RefSeq:XP_002004034.1 EnsemblMetazoa:FBtr0170505 GeneID:6578112
KEGG:dmo:Dmoj_GI19780 FlyBase:FBgn0142517 InParanoid:B4KIW3
Uniprot:B4KIW3
Length = 404
Score = 375 (137.1 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 105/342 (30%), Positives = 172/342 (50%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C ++ ++ L + C C L+Y+ HKFRAALG +K++ ++L+ GS S+
Sbjct: 34 CSKCGQSSQQLYKLNFRSAECSECFLKYVRHKFRAALGAAKVLPRNAEILLVIDGSSESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSY-FT 181
LL ++ ++ KR+ + +Y+D S I E ++ + + ++ + F
Sbjct: 94 VLLDMVHFAQTQNTFKRLHCNARVLYVD-AHCSP--IKEEESPLLALNELQRRYEPFEFY 150
Query: 182 CLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAA 241
++ +P +++L D L DS +++ F + T SR A
Sbjct: 151 VIQLNGDPQSLQLLKDYTVRQL-----DSILDQ-FNSST---SRQDYMQQKRKFLVGGVA 201
Query: 242 KKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRT-GDIITLRPLRDFSSK 300
KL C+ +F LAT+++ +++LG+GA V LDV DDR GD+ LRPL+D + +
Sbjct: 202 MKLKCSHVFEPSISPSLATQLLTSVALGRGASVALDVALLDDRLMGDVKLLRPLKDLNDQ 261
Query: 301 EVIYYNIFNDLSPVHV--PSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
EV +Y +L V PS L+ SLQ FV +LQ N+ STVSTVFRT DK+
Sbjct: 262 EVQFYVHAKELKAFRVDDPSHYPLSG--GSLQSLTRDFVANLQLNYASTVSTVFRTGDKI 319
Query: 359 SLDLTSMNVNNT-CLLCKAPLDTRADLASSSMGATRFSRYVS 399
+ S + + C LC++ LD S ++ A +SR VS
Sbjct: 320 APKRNSKEIMASYCALCQSLLDNNI---SDTLLAIEYSRAVS 358
Score = 40 (19.1 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 473 NLQRSLCYACQYVVKDMTS 491
N + LC+AC+ + +++S
Sbjct: 382 NEKEELCHACRNIQAELSS 400
>UNIPROTKB|B4MYR2 [details] [associations]
symbol:GK18201 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7260 "Drosophila willistoni" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629 OMA:MCSIGED
OrthoDB:EOG4W3R3F EMBL:CH963913 RefSeq:XP_002066265.1
EnsemblMetazoa:FBtr0248852 GeneID:6643580 KEGG:dwi:Dwil_GK18201
FlyBase:FBgn0220200 InParanoid:B4MYR2 Uniprot:B4MYR2
Length = 403
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 114/350 (32%), Positives = 181/350 (51%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDK-VLVAFSGSHSS 121
C +C ++ ++ + + C+ C L Y HKFRAALG +K + P+D VL+ GS S
Sbjct: 34 CQKCGQHSDDLFKVNFRSEECRDCFLNYARHKFRAALGAAKAL-PRDSDVLLLLDGSIES 92
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFT 181
+ LL +L ++ KR+ +Y+D+ S+ Q + + I K D Y T
Sbjct: 93 IVLLDMLHYAQTQNTFKRLHCQAKVLYLDE-SVVQ------EQQSLDIDRLQKLQDRY-T 144
Query: 182 CLEQALEPDNMKLYTDVAEL-PLEQFA-----KDSEINKMFQTVTTLSSRXXXXXXXXXX 235
+ + ++L TD++ L PL+ + ++S++ + TLS+R
Sbjct: 145 PFDLFV----IELGTDLSNLRPLKNYTPKTSREESDLKIKLDKLRTLSARQDYLQQQRKR 200
Query: 236 XXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG-DIITLRPL 294
A +LNCT +F DLAT+ + +I+LG+G LDV DDR DI LRPL
Sbjct: 201 FLASVAHQLNCTHVFVPSISKDLATQFLTSIALGRGGSAALDVALCDDRLDHDIKLLRPL 260
Query: 295 RDFSSKEVIYYNIFNDLSPVHV-PSLATLADP---LASLQKAAESFVTDLQTNFPSTVST 350
+D + +EV Y +L + + PSLAT ASLQ +FV +LQ N+ +TVST
Sbjct: 261 KDLNEQEVQLYVRARNLEDLKLGPSLATYGQEKGETASLQNLTAAFVRNLQENYAATVST 320
Query: 351 VFRTADKLSLDLTSMNVN-NTCLLCKAPLDTRADLASSSMGATRFSRYVS 399
VFRT +K++ + +V+ + C C++PLD+ L S ++ A +SR VS
Sbjct: 321 VFRTGNKIA---PNRHVDQDMCQQCQSPLDS---LLSDTLLAIEYSRVVS 364
>UNIPROTKB|Q17JB7 [details] [associations]
symbol:AAEL002056 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7159 "Aedes aegypti" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 EMBL:CH477233 RefSeq:XP_001654590.1
UniGene:Aae.11561 EnsemblMetazoa:AAEL002056-RA GeneID:5573416
KEGG:aag:AaeL_AAEL002056 VectorBase:AAEL002056 eggNOG:NOG308629
HOGENOM:HOG000112056 OMA:MCSIGED OrthoDB:EOG4W3R3F PhylomeDB:Q17JB7
Uniprot:Q17JB7
Length = 445
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 89/305 (29%), Positives = 162/305 (53%)
Query: 62 KLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
++C +CN + L K+ C+ C L Y+ HKFRA+LG +K++R KV+V F+G+ +
Sbjct: 34 EICRKCNDQRAVLKLNQKEPQCRECFLHYVRHKFRASLGATKIVRRGSKVMVVFNGAPEN 93
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY-FDSYF 180
+ +L +++ G++ + K++ +++ + I + ++ ++ ++ F +Y+
Sbjct: 94 VVMLDMVRHGLEQEAFKKLRVDPVVVFVGEDFIGRDQEGYEQSVREKVQILRQFGFPAYY 153
Query: 181 TCLEQALEPDNMKLYTDVAELPLEQFAKDSE-INKMFQTVTTLSSRXXXXXXXXXXXXXX 239
T L D+ + + +F D + + K+ Q + +++S+
Sbjct: 154 TVLGAQ---DSCSIEDNCLA---GKFIGDQDKVTKVLQGIKSITSKQDFIVQTRKQTYKA 207
Query: 240 AAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSS 299
AKKL C IF + +LA +++++SLG+G + LD+ F DDR + +RP+RD +
Sbjct: 208 IAKKLECGYIFLSSIGLELAKTLLSDVSLGRGKSLALDIAFCDDRDEERKIIRPMRDLNP 267
Query: 300 KEVIYYNIFNDLSPVHVPSLATLADPL---ASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
+E+ YY F + + S+A + DP +SLQ FV LQ +FPSTVSTVFRT D
Sbjct: 268 EEIEYYLKFAENQ---LQSVA-IVDPYLDKSSLQNLTSKFVDGLQLSFPSTVSTVFRTGD 323
Query: 357 KLSLD 361
KL +
Sbjct: 324 KLGAE 328
Score = 251 (93.4 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 83/290 (28%), Positives = 142/290 (48%)
Query: 205 QFAKDSE-INKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKII 263
+F D + + K+ Q + +++S+ AKKL C IF + +LA ++
Sbjct: 172 KFIGDQDKVTKVLQGIKSITSKQDFIVQTRKQTYKAIAKKLECGYIFLSSIGLELAKTLL 231
Query: 264 ANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA 323
+++SLG+G + LD+ F DDR + +RP+RD + +E+ YY F + + S+A +
Sbjct: 232 SDVSLGRGKSLALDIAFCDDRDEERKIIRPMRDLNPEEIEYYLKFAENQ---LQSVA-IV 287
Query: 324 DPL---ASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDL--TSMNVNNTCLLCKAPL 378
DP +SLQ FV LQ +FPSTVSTVFRT DKL + T N
Sbjct: 288 DPYLDKSSLQNLTSKFVDGLQLSFPSTVSTVFRTGDKLGAEKIPTCDNQLEDDDHFATLF 347
Query: 379 DTRADLASSSMGATRFSRYVSNATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEK 438
D L S++ R ++ +A + S + ++E + V++ +N + ++I E
Sbjct: 348 DKSLKLESNAE-EPRKCKFCHSALDYRDSTTLFATE---FSRMVSSRINVQLSHEEIIES 403
Query: 439 SVNGSEDIPNQIVNGMQYTPNEKVSRTEDNEGPDNLQRSLCYACQYVVKD 488
+ +D ++VN + ED+E L+R LC+AC+ ++ D
Sbjct: 404 TKLMEQDAC-KLVN----------AELEDDE-MRQLKRELCHACRNILVD 441
>UNIPROTKB|B4GWY0 [details] [associations]
symbol:GL21098 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7234 "Drosophila persimilis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 OrthoDB:EOG4W3R3F EMBL:CH479195
RefSeq:XP_002023179.1 ProteinModelPortal:B4GWY0
EnsemblMetazoa:FBtr0186713 GeneID:6597944 KEGG:dpe:Dper_GL21098
FlyBase:FBgn0158693 Uniprot:B4GWY0
Length = 405
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 105/343 (30%), Positives = 169/343 (49%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C + E+ L + C+ C L + HKFRA+LG +K++ +VL+A GS S+
Sbjct: 34 CNKCGVVSSELYKLNFRVAECRDCFLNHARHKFRASLGAAKVLPRNAEVLLAVDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ +R+ + +YIDD S+ +A A + T + + Y
Sbjct: 94 VLLDMLHFAQTQNTFRRLHCNARVVYIDDQSVHGGESMNLQALQA-LGTRYEPLEFYVVE 152
Query: 183 L-EQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAA 241
L A + Y+ + P + +N + + +L++R A
Sbjct: 153 LGASACSLQRLGQYSTSLKEP-------NGLNTKLEKLRSLTARQDYHQQQRKNLLASVA 205
Query: 242 KKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSK 300
+KL+C+ +F DLAT+++ +I+LG+G LDV DDR + LRPLRD + +
Sbjct: 206 QKLSCSHVFEPSVSGDLATQLLTSIALGRGGSAALDVALLDDRLAAGVKLLRPLRDLNEQ 265
Query: 301 EVIYYNIFNDLSPVHVP--SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
EV +Y L P+ S ASLQ +FV +LQ N+P+TVSTVFRT DK+
Sbjct: 266 EVRFYVHACQLKPLRESGSSYGQERGQTASLQNLTAAFVGNLQQNYPATVSTVFRTGDKI 325
Query: 359 SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
+ + M +C C++PLD + S ++ A +SR VS A
Sbjct: 326 AAN-AHME-QASCAQCQSPLDAKL---SDTLLAIEYSRAVSEA 363
>UNIPROTKB|J9NS19 [details] [associations]
symbol:CTU2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] UniPathway:UPA00988
GO:GO:0005737 GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729
InterPro:IPR019407 Pfam:PF10288 GeneTree:ENSGT00390000008797
EMBL:AAEX03003966 EMBL:AAEX03003967 EMBL:AAEX03003968
EMBL:AAEX03003965 Ensembl:ENSCAFT00000045724 Uniprot:J9NS19
Length = 421
Score = 256 (95.2 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 50/143 (34%), Positives = 86/143 (60%)
Query: 212 INKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKG 271
++++F +V TL+++ A+ +K+ T ++ T LA K++ +++LG+G
Sbjct: 223 LSRLFDSVKTLTAKEELLQTLRGHLLLHVARTHGYSKVMTGDSCTRLAIKLMTSLALGRG 282
Query: 272 AHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQK 331
A + D GFSD+R GD++ +RP+R+ + KEV +YN + + P++ T A AS+ +
Sbjct: 283 AFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFAVPSIFTPAIDTKAPEKASIHR 342
Query: 332 AAESFVTDLQTNFPSTVSTVFRT 354
E F+ LQ FPSTVSTV+RT
Sbjct: 343 LMEGFLLRLQAQFPSTVSTVYRT 365
Score = 189 (71.6 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 38/113 (33%), Positives = 64/113 (56%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
C +C VV+R D +C+ C + HKFRA LGK++++ P +KVL+A+SG SS +
Sbjct: 27 CVKCKDGLPVVVIRAGDAFCRDCFRAFYVHKFRAVLGKNRLIFPGEKVLLAWSGGPSSSS 86
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
++ + EG+ S KR+ F +Y+D+G+ S R A++ ++ F
Sbjct: 87 MVWQVLEGLSRDSAKRLRFVPGVVYVDEGAACGQSWENRAKTLAEVKLILRSF 139
>UNIPROTKB|Q29K59 [details] [associations]
symbol:GA10142 "Cytoplasmic tRNA 2-thiolation protein 2"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 EMBL:CH379061 GO:GO:0000049
GO:GO:0002098 GO:GO:0034227 KO:K14169 InterPro:IPR019407
Pfam:PF10288 eggNOG:NOG308629 OrthoDB:EOG4W3R3F
RefSeq:XP_001356256.2 ProteinModelPortal:Q29K59 GeneID:4816297
KEGG:dpo:Dpse_GA10142 FlyBase:FBgn0070201 InParanoid:Q29K59
Uniprot:Q29K59
Length = 405
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 104/343 (30%), Positives = 168/343 (48%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +C + E+ L + C+ C L + HKFRA+LG +K++ +VL+A GS S+
Sbjct: 34 CNKCGVVSSELYKLNFRVAECRDCFLNHARHKFRASLGAAKVLPRNAEVLLAVDGSAESL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTC 182
LL +L ++ +R+ + +YIDD S+ +A A + T + + Y
Sbjct: 94 VLLDMLHFAQTQNTFRRLHCNARVVYIDDQSVHGGESMNLQALQA-LGTRYEPLEFYVVE 152
Query: 183 L-EQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAA 241
L A + Y+ + P + +N + + +L++R A
Sbjct: 153 LGASACSLQRLGQYSTSLKEP-------NGLNTKLEKLRSLTARQDYHQQQRKNLLASVA 205
Query: 242 KKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDR-TGDIITLRPLRDFSSK 300
+KL+C+ +F DLA +++ +I+LG+G LDV DDR + LRPLRD + +
Sbjct: 206 QKLSCSHVFEPSVSGDLAAQLLTSITLGRGGSAALDVALLDDRLAAGVKLLRPLRDLNEQ 265
Query: 301 EVIYYNIFNDLSPVHVP--SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
EV +Y L P+ S ASLQ +FV +LQ N+P+TVSTVFRT DK+
Sbjct: 266 EVRFYVHACQLKPLRESGSSYGQERGQTASLQNLTAAFVGNLQQNYPATVSTVFRTGDKI 325
Query: 359 SLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
+ + M +C C++PLD + S ++ A +SR VS A
Sbjct: 326 AAN-AHME-QASCAQCQSPLDAKL---SDTLLANEYSRAVSEA 363
>UNIPROTKB|B4JCV8 [details] [associations]
symbol:GH10624 "Cytoplasmic tRNA 2-thiolation protein 2"
species:7222 "Drosophila grimshawi" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629 OMA:MCSIGED
OrthoDB:EOG4W3R3F EMBL:CH916368 RefSeq:XP_001988330.1
EnsemblMetazoa:FBtr0146038 GeneID:6562494 KEGG:dgr:Dgri_GH10624
FlyBase:FBgn0118105 InParanoid:B4JCV8 Uniprot:B4JCV8
Length = 397
Score = 263 (97.6 bits), Expect = 4.5e-33, Sum P(3) = 4.5e-33
Identities = 67/199 (33%), Positives = 107/199 (53%)
Query: 203 LEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKI 262
L++++ S +N Q + +L++R A L C+ +F + + LAT++
Sbjct: 158 LKEYSA-SIVNATQQELRSLTARQDYGLQQRKRLIGAVAAHLQCSHVFESSISSTLATQL 216
Query: 263 IANISLGKGAHVPLDVGFSDDRT-GDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLAT 321
+ +++LG+G V LDV DDR DI LRPL+D + +EV +Y L P +
Sbjct: 217 LTSVALGRGGSVALDVALLDDRLQDDIKLLRPLKDLNEQEVQFYVHAQQLQPFTSENELD 276
Query: 322 LADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL-DLTSMNVNNTCLLCKAPLDT 380
+ ASLQ +FV +LQ N+ STVST+FRT DK++ T+++ TC LC + LD
Sbjct: 277 QSSA-ASLQNLTSAFVANLQINYASTVSTIFRTGDKIAAKQQTNVDPTTTCTLCHSVLDH 335
Query: 381 RADLASSSMGATRFSRYVS 399
+ S ++ A +SR VS
Sbjct: 336 QL---SDTLLAIEYSRAVS 351
Score = 146 (56.5 bits), Expect = 4.5e-33, Sum P(3) = 4.5e-33
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 64 CPRCNTNNGEVV-LRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSM 122
C +CN + E+ L + C+ C L Y HKFRAALG +K + +VL+ GS +S+
Sbjct: 34 CSKCNLASDELYKLNFRAAECQLCFLSYARHKFRAALGAAKALPRSAEVLLLVDGSGASL 93
Query: 123 ALLHLLQEGMQLSSHKRILFSVCAIYID---DGSISQV-SISERKA 164
LL +L ++ KR+ + +YID + S+S + + ER A
Sbjct: 94 VLLDMLHFAQTQNTFKRLHCNARVLYIDACGNDSLSSLHKLHERYA 139
Score = 41 (19.5 bits), Expect = 4.5e-33, Sum P(3) = 4.5e-33
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 476 RSLCYACQYVVKDMTS 491
+ LC+AC+ + ++TS
Sbjct: 378 QDLCHACRNIQAELTS 393
>UNIPROTKB|Q0UDH1 [details] [associations]
symbol:NCS2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:321614 "Phaeosphaeria nodorum SN15" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 KO:K14169 InterPro:IPR019407 Pfam:PF10288 OMA:KQRKQMM
OrthoDB:EOG4XKZGZ EMBL:CH445340 RefSeq:XP_001800475.1
EnsemblFungi:SNOT_10193 GeneID:5977381 KEGG:pno:SNOG_10193
Uniprot:Q0UDH1
Length = 382
Score = 246 (91.7 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 89/339 (26%), Positives = 148/339 (43%)
Query: 56 SFSRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKM---MRP--QDK 110
S S +LC +C N +V+R K I C C +Y++ K L ++ P Q K
Sbjct: 6 SDSATSELCEKCKENISILVVRAKPI-CHDCFARYVHTKAIKRLESFRVNFAASPDQQRK 64
Query: 111 VLVAFSGSHSSMALLHLLQEGM--QLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQ 168
+L+ S SS LLH+L + Q S R F++ + +D+GS+ + + + A
Sbjct: 65 ILLPLSHGVSSTTLLHILDLHLNTQRSKTNRTGFAISVLVVDEGSLDPARLDKVRERYAN 124
Query: 169 IATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSE-INKMFQTVTTLSSRXX 227
A F L PD+ L + E +++ E + + ++T+ ++R
Sbjct: 125 HDYASLPLHDVFRLL-----PDDASLRAFLPESQVQEVCSTQEQLTSLIASLTSATARAD 179
Query: 228 XXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG- 286
AK+ C I ++ T LA K +A + G+G +P + SD ++
Sbjct: 180 VLTTLRTRLIVEHAKQTGCESILWGDSTTRLAEKTLAETAKGRGFSLPWQI--SDGKSPF 237
Query: 287 DIITLRPLRDFSSKEVIYYNIFND--LSP-VHVP----SLATLADPLASLQKAAESFVTD 339
DI PLRD KE+ Y + LS V+ P + A+++ ++ + +
Sbjct: 238 DINFHYPLRDVLKKELFSYVDLAEPALSALVYEPQSGATQASMSSKNTTIDDLMKQYFES 297
Query: 340 LQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
++ NFPS VS V RT KL + T N C LC P+
Sbjct: 298 VEENFPSIVSNVVRTTGKLEVP-TGATSNPRCSLCGMPV 335
>UNIPROTKB|F1NVI8 [details] [associations]
symbol:F1NVI8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] UniPathway:UPA00988 GO:GO:0005737
GO:GO:0043234 GO:GO:0008033 InterPro:IPR019407 Pfam:PF10288
GeneTree:ENSGT00390000008797 EMBL:AADN02054094 IPI:IPI00593286
Ensembl:ENSGALT00000010192 OMA:TINIMEI Uniprot:F1NVI8
Length = 204
Score = 203 (76.5 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 42/102 (41%), Positives = 59/102 (57%)
Query: 279 GFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVT 338
GF D R GD+ +RP+RD+ +KE+ +YN F + V P L S+ + E+F+
Sbjct: 1 GFVDSRHGDVTVVRPMRDYMAKEIAFYNHFFGVPTVITPPLHAKRREKTSIHRLMENFLL 60
Query: 339 DLQTNFPSTVSTVFRTADKLSLDLTSMNVN-NTCLLCKAPLD 379
LQ +FPST+STV+RT +KLS+ N CLLC LD
Sbjct: 61 GLQVDFPSTISTVYRTGEKLSVAPAESNGELQRCLLCLCALD 102
Score = 45 (20.9 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 478 LCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
LCY+C+ K+M + + + M+ I++FLL
Sbjct: 151 LCYSCRLTFKEMGPPATLPPYVRTEAQHRNCRALMKHFIQEFLL 194
>DICTYBASE|DDB_G0268714 [details] [associations]
symbol:ctu2 "cytosolic thiouridylase subunit 2"
species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0034227 "tRNA thio-modification" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0002098 "tRNA wobble
uridine modification" evidence=ISS] [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] UniPathway:UPA00988
dictyBase:DDB_G0268714 GO:GO:0005829 GenomeReviews:CM000150_GR
EMBL:AAFI02000004 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629 RefSeq:XP_646893.1
ProteinModelPortal:Q55EX7 EnsemblProtists:DDB0302516 GeneID:8616578
KEGG:ddi:DDB_G0268714 OMA:EAICTIC Uniprot:Q55EX7
Length = 523
Score = 244 (91.0 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 88/323 (27%), Positives = 149/323 (46%)
Query: 72 GEVVLRLK-DIYCKACLLQYLNHKFRAALGKSK-MMRPQDKVLVAFSGSHSSMALLHLLQ 129
G+ ++ + + C C + + KF+ + K + R +K+LVA SG S LL LL+
Sbjct: 85 GKPIINFRSEQLCWECYRELILKKFKLNIVKVRESKRDAEKLLVALSGGTCSSMLLELLK 144
Query: 130 EGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSY---FTCLEQA 186
+ + S ++ + ++ID+ SI+ N+ +K F++ F LE
Sbjct: 145 QCTEGSGKAKMFLDIKCVHIDESSITPYQ------NHNDTIEFLKEFNNVKLGFPNLEII 198
Query: 187 LEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNC 246
D + T + E + +++ F +++ +S+ A KLNC
Sbjct: 199 PLEDILGTVTPLGE-------RTNQLKLQFAQLSSETSKEDLLLYYRNQLLIQVAHKLNC 251
Query: 247 TKIFTAETQTDLATKIIANISLGKGAHVPLDVG-FSDDRTGDIITLRPLRDFSSKEV-IY 304
K+ + LA +++A+ S G+G VP + + + DI +P+RDF KE+ IY
Sbjct: 252 KKVILGTSSNRLAVQLVASTSKGRGFSVPNETSVIIEQPSNDIKFYQPMRDFLLKEIFIY 311
Query: 305 YNIFNDLSPVHVP-SLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLT 363
Y N L PV V S+ L P S+ E F+ LQ TV T+ R+ DKL
Sbjct: 312 YRHLNIL-PVPVMFSILNLK-PKHSINTLCEDFLHCLQDISNQTVHTLLRSVDKLISP-- 367
Query: 364 SMNVNNTCLLCKAPLDTRADLAS 386
S++ N C +C +PL T A++ S
Sbjct: 368 SIDSNYNCSICSSPL-TSAEIKS 389
Score = 225 (84.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 89/358 (24%), Positives = 161/358 (44%)
Query: 176 FDSYFTCLEQALEPDNMKL-YTDVAELPLEQFA--------KDSEINKMFQTVTTLSSRX 226
+ ++ +E E +N+KL + ++ +PLE + +++ F +++ +S+
Sbjct: 172 YQNHNDTIEFLKEFNNVKLGFPNLEIIPLEDILGTVTPLGERTNQLKLQFAQLSSETSKE 231
Query: 227 XXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVG-FSDDRT 285
A KLNC K+ + LA +++A+ S G+G VP + + +
Sbjct: 232 DLLLYYRNQLLIQVAHKLNCKKVILGTSSNRLAVQLVASTSKGRGFSVPNETSVIIEQPS 291
Query: 286 GDIITLRPLRDFSSKEV-IYYNIFNDLSPVHVP-SLATLADPLASLQKAAESFVTDLQTN 343
DI +P+RDF KE+ IYY N L PV V S+ L P S+ E F+ LQ
Sbjct: 292 NDIKFYQPMRDFLLKEIFIYYRHLNIL-PVPVMFSILNLK-PKHSINTLCEDFLHCLQDI 349
Query: 344 FPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNATR 403
TV T+ R+ DKL S++ N C +C +PL T A++ S + +N +
Sbjct: 350 SNQTVHTLLRSVDKLISP--SIDSNYNCSICSSPL-TSAEIKSLEKVILDNN---NNINK 403
Query: 404 EQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPNEKVS 463
E ++ + ++ + T ++D N +ED N N T S
Sbjct: 404 ENKNN-----NNNNNNNNNNNGCCSTTKTED--SSCCNKTED--NSSNNNNNNTGCCSSS 454
Query: 464 RTEDNEGPDNLQRSLCYACQYVVKDMTSDKDIGEGILKKCLQEKSLNEMEDQIRDFLL 521
+ + +LCY+C+ + +D S +I I + Q + ++++++I+DFLL
Sbjct: 455 SSTSTSSITVNKETLCYSCKILYRDFKSTPNIAPYIKENSKQLLTTSQLKNEIKDFLL 512
>WB|WBGene00009256 [details] [associations]
symbol:tut-2 species:6239 "Caenorhabditis elegans"
[GO:0007281 "germ cell development" evidence=IMP]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0007281 GO:GO:0000049
GO:GO:0002098 GO:GO:0034227 KO:K14169 InterPro:IPR019407
Pfam:PF10288 eggNOG:NOG308629 OMA:MCSIGED HOGENOM:HOG000112057
EMBL:Z73974 PIR:E89195 PIR:T21554 RefSeq:NP_505729.1
ProteinModelPortal:Q19906 PaxDb:Q19906 EnsemblMetazoa:F29F11.3
GeneID:179483 KEGG:cel:CELE_F29F11.3 UCSC:F29F11.3 CTD:179483
WormBase:F29F11.3 GeneTree:ENSGT00390000008797 InParanoid:Q19906
NextBio:905590 Uniprot:Q19906
Length = 349
Score = 227 (85.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 81/341 (23%), Positives = 149/341 (43%)
Query: 62 KLCPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDK--VLVAFSGS 118
K C +C+ + + K YC+ C +Q + +KFR++L K K+ + D L+ F G+
Sbjct: 13 KKCVKCDKDAKFTGVDPKKAWYCQECFVQMVRNKFRSSLSKKKIYKDADARDTLIVFDGT 72
Query: 119 HSSMALLHLLQEGMQLSSHKRILFSVCAIYI----DDGSISQVSISERKANNAQIATAMK 174
S LLH + + ++ ++KR++ + + +D I V I + + ++
Sbjct: 73 LSGTFLLHQINDALKQITYKRLMVKPTVLVLVSLTEDTEIQMV-IKRIQEIKKSVLENVR 131
Query: 175 YFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXX 234
+ ++ C ++ ++ KL E K S+ N++ + + + R
Sbjct: 132 WVVAHLAC---SMYDEDFKL----KENECNGVEKISDYNQLIASCSVPTYRKELERVLKE 184
Query: 235 XXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPL 294
A + K + DL I + LG+G + V +D R D + +RPL
Sbjct: 185 KCLQKIACSMGILKCMVPDHADDLGRLAIDQLCLGRGGSISTLVTVTDKRP-DFMLIRPL 243
Query: 295 RDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTN-FPSTVSTVFR 353
D S KE+ YN D+ H +A + S+Q ++F+ L+ F ST++TV
Sbjct: 244 CDISKKELAVYNYLCDIDK-HCIHIAQQNNQQKSVQTLTDAFICTLENEKFYSTINTVLS 302
Query: 354 TADKLSLDLTSMNVNNT-CLLCKAPLDTRADLASSSMGATR 393
TA K+ TS+ +++ C C + AD S+ A R
Sbjct: 303 TAAKIHN--TSIGKDDSKCSFCNVEV---ADSVCSTCSAIR 338
>UNIPROTKB|Q19906 [details] [associations]
symbol:F29F11.3 "Cytoplasmic tRNA 2-thiolation protein 2"
species:6239 "Caenorhabditis elegans" [GO:0005829 "cytosol"
evidence=ISS] [GO:0000049 "tRNA binding" evidence=ISS] [GO:0034227
"tRNA thio-modification" evidence=ISS] [GO:0002098 "tRNA wobble
uridine modification" evidence=ISS] UniPathway:UPA00988
GO:GO:0005829 GO:GO:0007281 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 OMA:MCSIGED HOGENOM:HOG000112057 EMBL:Z73974
PIR:E89195 PIR:T21554 RefSeq:NP_505729.1 ProteinModelPortal:Q19906
PaxDb:Q19906 EnsemblMetazoa:F29F11.3 GeneID:179483
KEGG:cel:CELE_F29F11.3 UCSC:F29F11.3 CTD:179483 WormBase:F29F11.3
GeneTree:ENSGT00390000008797 InParanoid:Q19906 NextBio:905590
Uniprot:Q19906
Length = 349
Score = 227 (85.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 81/341 (23%), Positives = 149/341 (43%)
Query: 62 KLCPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDK--VLVAFSGS 118
K C +C+ + + K YC+ C +Q + +KFR++L K K+ + D L+ F G+
Sbjct: 13 KKCVKCDKDAKFTGVDPKKAWYCQECFVQMVRNKFRSSLSKKKIYKDADARDTLIVFDGT 72
Query: 119 HSSMALLHLLQEGMQLSSHKRILFSVCAIYI----DDGSISQVSISERKANNAQIATAMK 174
S LLH + + ++ ++KR++ + + +D I V I + + ++
Sbjct: 73 LSGTFLLHQINDALKQITYKRLMVKPTVLVLVSLTEDTEIQMV-IKRIQEIKKSVLENVR 131
Query: 175 YFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXX 234
+ ++ C ++ ++ KL E K S+ N++ + + + R
Sbjct: 132 WVVAHLAC---SMYDEDFKL----KENECNGVEKISDYNQLIASCSVPTYRKELERVLKE 184
Query: 235 XXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPL 294
A + K + DL I + LG+G + V +D R D + +RPL
Sbjct: 185 KCLQKIACSMGILKCMVPDHADDLGRLAIDQLCLGRGGSISTLVTVTDKRP-DFMLIRPL 243
Query: 295 RDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTN-FPSTVSTVFR 353
D S KE+ YN D+ H +A + S+Q ++F+ L+ F ST++TV
Sbjct: 244 CDISKKELAVYNYLCDIDK-HCIHIAQQNNQQKSVQTLTDAFICTLENEKFYSTINTVLS 302
Query: 354 TADKLSLDLTSMNVNNT-CLLCKAPLDTRADLASSSMGATR 393
TA K+ TS+ +++ C C + AD S+ A R
Sbjct: 303 TAAKIHN--TSIGKDDSKCSFCNVEV---ADSVCSTCSAIR 338
>UNIPROTKB|A7F190 [details] [associations]
symbol:ncs2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:665079 "Sclerotinia sclerotiorum 1980 UF-70" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 OrthoDB:EOG4XKZGZ EMBL:CH476638
RefSeq:XP_001587368.1 GeneID:5483509 KEGG:ssl:SS1G_11360
Uniprot:A7F190
Length = 371
Score = 225 (84.3 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 80/308 (25%), Positives = 141/308 (45%)
Query: 63 LCPRCNTNNGEVVLRLKDIYCKACLLQYLNHK----FRAALGKSKMMRPQDKVLVAFSGS 118
LC RCN + +R + + C+ C LQY+ K GK PQ K+L+ S
Sbjct: 19 LCKRCNEVQATLQIRSESV-CQKCFLQYIKTKAVKRMETYKGKRSTKVPQ-KLLLPLSFG 76
Query: 119 HSSMALLHLLQE--GMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
SS LLH+L G+Q R+ + + ++ID + ++R+A+ A++ KY
Sbjct: 77 PSSSCLLHMLDGYLGIQHERMNRVSYELFVVHID----LYLDDADREASAARL---QKYK 129
Query: 177 DSY----FTC--LEQALEPDNMKLYT-DVAELPLEQFAKDS-EINKMFQTVTTLSSRXXX 228
D Y ++ L +AL+ + + + +++LP + S ++ K+ ++++ +SR
Sbjct: 130 DQYPRHSYSSYGLHEALQLEGIDWQSLGISDLPTQDTKASSFDLQKIVSSLSSATSRADI 189
Query: 229 XXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDI 288
AK+ +C I +T T LA K + + G+G +P V G I
Sbjct: 190 VSTLLNRLLVDVAKRNDCESILFGDTTTRLAEKTLTETAKGRGFSLPWQVSDGPSPYG-I 248
Query: 289 ITLRPLRDFSSKEVIYYNI-FNDLSP--VHV--PSLATLADPLASLQKAAESFVTDLQTN 343
L PLRD KE++ ++ F+ L VH PS + + ++ + ++ N
Sbjct: 249 GFLYPLRDILKKEIMTFSTSFSPLPELVVHQAPPSHISASSKSTTIDDLMAQYFESVEEN 308
Query: 344 FPSTVSTV 351
FPS V+ V
Sbjct: 309 FPSIVANV 316
>UNIPROTKB|A2R475 [details] [associations]
symbol:ncs2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:425011 "Aspergillus niger CBS 513.88" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 HOGENOM:HOG000089454 OrthoDB:EOG4XKZGZ
EMBL:AM270327 RefSeq:XP_001401305.1 EnsemblFungi:CADANGAT00011619
GeneID:4987540 GenomeReviews:AM270993_GR KEGG:ang:ANI_1_1636124
Uniprot:A2R475
Length = 366
Score = 213 (80.0 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 88/339 (25%), Positives = 150/339 (44%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHK-FRAALGKSKMMR--PQD---KVLVAFSG 117
C C+ +LR + + C+ C +++LN K FR + + ++ R PQ K+L+ S
Sbjct: 10 CMNCHEAEPAFLLRERHV-CQECYIRFLNFKPFRR-MERYRLRRNMPQTGPCKLLLPLSY 67
Query: 118 SHSSMALLHLLQ---EGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMK 174
SS LLH+L E ++ H F + + ++ +IS V E AQ +
Sbjct: 68 GVSSTVLLHMLHRQLEALRSKKHGPAGFEILVLVVEPSTISPVPPHEEGFALAQQTFPLC 127
Query: 175 YFDSY-FTCLEQALEPDNMKLYTDVA--ELPLEQFAKDSE-INKMFQTVTTLSSRXXXXX 230
F F + + L+PD ++ + A + D E +N+ +++TT +S+
Sbjct: 128 SFTRLPFHSIFE-LDPDVHQIMSQYAGEHFTDDTSLSDEERLNRFRRSITTATSKSDVDQ 186
Query: 231 XXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT 290
AKK+ C I ++ + LA K +AN++ G+G+ V V G
Sbjct: 187 ILLNKLVVAFAKKMECRGIVWGDSDSKLAAKTLANVAKGRGSAVTWQVCDGMSPFGLEFN 246
Query: 291 LRPLRDFSSKEV-IYYNIFNDLSPVHV----PSLATLADPLASLQKAAESFVTDLQTNFP 345
PLRD + E+ Y +F +L+ + V PS TL L S+ + +V+ +P
Sbjct: 247 F-PLRDVFTAEIRTYATLFPELAGIIVHDEPPSENTLTKNL-SIDELMIRYVSTQGEKYP 304
Query: 346 STVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADL 384
+ V RTA KL TS+ C C A + T ++
Sbjct: 305 GVMLNVTRTASKLQSSGTSIG-GLQCNFCGAFMTTNENI 342
Score = 44 (20.5 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 453 GMQYTPNEKVSRTEDNEGPDNLQRSLCYAC 482
G T NE ++ + NE Q CYAC
Sbjct: 333 GAFMTTNENITGEQGNE-----QLQFCYAC 357
>UNIPROTKB|A8X8I6 [details] [associations]
symbol:CBG09667 "Cytoplasmic tRNA 2-thiolation protein 2"
species:6238 "Caenorhabditis briggsae" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 InterPro:IPR019407
Pfam:PF10288 EMBL:HE600998 EnsemblMetazoa:CBG09667
WormBase:CBG09667 eggNOG:KOG2594 HOGENOM:HOG000112057
Uniprot:A8X8I6
Length = 349
Score = 204 (76.9 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 75/324 (23%), Positives = 139/324 (42%)
Query: 62 KLCPRCNTNNGEVVLRLKDI-YCKACLLQYLNHKFRAALGKSKMMRPQDK--VLVAFSGS 118
K C +C + K YC+ C +Q + +KFR+AL K K+ + D LV + GS
Sbjct: 13 KTCVKCEKEAKFTGVDPKKAWYCQECFIQMVRNKFRSALSKKKIYKEADARDTLVVYDGS 72
Query: 119 HSSMALLHLLQEGMQLSSHKRILFSVCAIYI----DDGSISQV--SISERKANNAQIATA 172
S LL+ + + ++ ++KR++ + + ++ I QV ++E K N +
Sbjct: 73 PSGTFLLNQIDDALKQITYKRLMVKPTVLVLVSESEEPEIQQVIKRVAEIKKNFLE---N 129
Query: 173 MKYFDSYFT-CLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXX 231
+ +F ++ CL EP +K E K + + + + + +
Sbjct: 130 VNWFIAHIAFCLYD--EPSELK------EFECNGIEKITAYKYLLASCSVPTYKKELERM 181
Query: 232 XXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITL 291
A+ L TK + DL + + LG+G + V ++ R D + +
Sbjct: 182 LKEKCLQKLAESLKVTKCMVTDDADDLGRLALDQLCLGRGGSLSSLVTVAEKRN-DFMII 240
Query: 292 RPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTN-FPSTVST 350
RPL D S +E+ YN + ++ T + S+Q ++F+ L+ F ST++T
Sbjct: 241 RPLCDLSKREISIYNYLCKIDDHYIQFSHTQSQE-KSVQTLTDAFIRTLEDEKFYSTINT 299
Query: 351 VFRTADKLSLDLTSMNVNNTCLLC 374
V TA K+ T+ + C +C
Sbjct: 300 VLSTASKIHN--TNGKDGSRCSMC 321
>POMBASE|SPBC19C2.13c [details] [associations]
symbol:ctu2 "cytosolic thiouridylase subunit Ctu2"
species:4896 "Schizosaccharomyces pombe" [GO:0002143 "tRNA wobble
position uridine thiolation" evidence=IPI] [GO:0002144 "cytosolic
tRNA wobble base thiouridylase complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0032447 "protein urmylation" evidence=ISO] UniPathway:UPA00988
PomBase:SPBC19C2.13c GO:GO:0005634 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0032447 GO:GO:0002143 GO:GO:0002144
KO:K14169 InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629
OrthoDB:EOG4XKZGZ OMA:EAICTIC PIR:T39804 RefSeq:NP_595698.1
ProteinModelPortal:Q9UUC7 DIP:DIP-29901N
EnsemblFungi:SPBC19C2.13c.1 GeneID:2540896 KEGG:spo:SPBC19C2.13c
NextBio:20802011 Uniprot:Q9UUC7
Length = 366
Score = 200 (75.5 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 82/330 (24%), Positives = 141/330 (42%)
Query: 60 ADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAA--LGKSKMM-RPQDKVLVAFS 116
AD C +C+ N VL D C +C ++ + +K R L + + R + ++A S
Sbjct: 10 ADSKCSKCD--NKATVLTKSDAVCDSCFVRRIENKIRRQFELVRPNLQGRKSKRAMLAIS 67
Query: 117 GSHSSMALLHLLQE-GMQLSSHKRILFS-VCAIYIDDGSISQVSISERKANNAQIATAMK 174
G SSMA+L + R +F + A++ G+ S V A + + +
Sbjct: 68 GGISSMAMLETANYLSKYRDDNYRPMFDELLAVHFQWGTDSAV------AKTIEESISKN 121
Query: 175 YFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXX 234
Y F + +A E N + TD + +E A + + N + +++L+SR
Sbjct: 122 YPKCPFKVIGEA-ELLNRTIATD-SRGNIEINADNEKFNP--EVISSLASRQDLLYRIRD 177
Query: 235 XXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG-DIITLRP 293
A+K NC I ++ T +A +++ ++ G+G +P D LRP
Sbjct: 178 KLLVSYARKANCDTIVFGDSGTTIAARVLELVAEGRGFAIPWYTSVCSKLPNCDTFLLRP 237
Query: 294 LRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFR 353
LR+ S ++ Y L+ SL A P ++ ES+ + L FPS VSTV +
Sbjct: 238 LREVLSSDLKSYMNIKGLA--FCDSLIE-ARP-NTIHGVTESYFSSLNDTFPSLVSTVVK 293
Query: 354 TADKLSLDLTSMNVNNTCLLCKAPLDTRAD 383
+ KL + T C +C P+ A+
Sbjct: 294 MSSKLHVPSTEA----ICTICNLPMQEDAE 319
>UNIPROTKB|B2W6W8 [details] [associations]
symbol:ncs2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:426418 "Pyrenophora tritici-repentis Pt-1C-BFP" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 InterPro:IPR019407 Pfam:PF10288 OrthoDB:EOG4XKZGZ
EMBL:DS231619 RefSeq:XP_001935889.1 GeneID:6343809 Uniprot:B2W6W8
Length = 380
Score = 197 (74.4 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 87/333 (26%), Positives = 146/333 (43%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKM---MRPQDKVLVAFSGSHS 120
C RC ++ +V+R + + C C +Y++ K L ++ Q +VLV S S
Sbjct: 14 CRRCKASS-VLVVRSEPL-CHDCFARYIHTKCIKRLETFRVNFTAEQQPRVLVPLSFGIS 71
Query: 121 SMALLHLLQ--EGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDS 178
S+ LLH+L + Q S R F++ A+YI+D Q ++E + + +Y
Sbjct: 72 SVTLLHVLDLHQRTQKSKTGRTGFNISAVYIEDPE--QSIMAEDLLDQVR----EQYSGH 125
Query: 179 YFTCLEQALEPDNMKLYTDVAEL----PLEQFAKDSE--INKMFQTVTTLSSRXXXXXXX 232
+ L L D +L D A + P Q+A E + M ++T+ ++R
Sbjct: 126 QYASLP--LH-DVFRLVQDDASIRSLVPETQYASTPEEKLVHMINSLTSATARADVLSTL 182
Query: 233 XXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLR 292
AK C I ++ T LA K ++ + G+G +P V G +
Sbjct: 183 KTRLIVEHAKLTGCESILWGDSTTRLAQKTLSETAKGRGFSLPWQVSDGPSPFG-LNFHY 241
Query: 293 PLRDFSSKEVI-YYNIFND-LSP-VHVPSL-ATLADPLA---SLQKAAESFVTDLQTNFP 345
PLRD KE++ Y N+ L VH S+ AT A + ++ + + ++ NFP
Sbjct: 242 PLRDVLKKELVSYMNMAETGLKTLVHETSIGATQASTSSKNTTIDDLMKQYFESVEDNFP 301
Query: 346 STVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
S V+ V RTA +L +++ C LC P+
Sbjct: 302 SIVANVVRTASRLEAQPDALS-EPKCSLCSMPV 333
>UNIPROTKB|Q1DK31 [details] [associations]
symbol:NCS2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:246410 "Coccidioides immitis RS" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 GO:GO:0005829
GO:GO:0000049 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 EMBL:GG704915 RefSeq:XP_001240020.1
GeneID:4559065 KEGG:cim:CIMG_09050 KEGG:cim:CIMG_09332
Uniprot:Q1DK31
Length = 376
Score = 193 (73.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 81/348 (23%), Positives = 155/348 (44%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR-PQD---KVLVAFSGSH 119
C C V +R +++ C+ C +++L K + + ++ P+D K+++ S
Sbjct: 3 CVDCRFAPACVTVRTRNL-CENCFIRFLQTKVLRRMERYRLRNAPKDRQRKLILPLSYGV 61
Query: 120 SSMALLHLLQEGM---QLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYF 176
SS+ALLH++ + + + KR F + + +D S+ + A+I A Y
Sbjct: 62 SSLALLHIVSSLLLKQRTTGQKRTAFDLHVLIVDPVSLHPSKGAAASGRLAKIKEA--YP 119
Query: 177 DSYFTCLE-QALEPDNMKLYTDVAE---LPL--EQFAKDSEINKMFQ-TVTTLSSRXXXX 229
D+ ++ + +++ + + D+++ +PL D EI +F+ + +T ++R
Sbjct: 120 DNTYSEVPLRSIFDYDPDIRGDISQHTGIPLGSNPSRSDEEILNLFRASFSTATARADID 179
Query: 230 XXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV--GFSDDRTGD 287
AK C I ++ + LA K +AN++ G+G+ + +V G S D
Sbjct: 180 GILLRRLIVAFAKSHKCDGILWGDSDSRLAAKTLANVAKGRGSSLVWNVCEGMSP---WD 236
Query: 288 IITLRPLRDFSSKEVIYYNIF--NDLSPV--HVP-SLATLADPLASLQKAAESFVTDLQT 342
I PLRD E+ Y + DL + P + L++ S++ +V
Sbjct: 237 IYFNFPLRDLYKSELEVYASYALRDLQQIIDQDPRNFEDLSNRHMSIEDLMSQYVLTQGA 296
Query: 343 NFPSTVSTVFRTADKLSLDLTSMNVNNT--CLLCKAPLDTRADLASSS 388
+P ++ + RT DKL T+ V N C+LC+ P + AS S
Sbjct: 297 KYPGVMANIVRTVDKL----TTPGVENAKMCILCRVPAGENLNAASGS 340
Score = 41 (19.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 476 RSLCYACQYVVKDM 489
RS CY C + DM
Sbjct: 355 RSTCYGCMRTLLDM 368
>UNIPROTKB|A1DDV3 [details] [associations]
symbol:ncs2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:331117 "Neosartorya fischeri NRRL 181" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 KO:K14169 InterPro:IPR019407 Pfam:PF10288
HOGENOM:HOG000089454 OrthoDB:EOG4XKZGZ eggNOG:NOG302050
EMBL:DS027696 RefSeq:XP_001259457.1 EnsemblFungi:CADNFIAT00007581
GeneID:4585824 KEGG:nfi:NFIA_074800 Uniprot:A1DDV3
Length = 370
Score = 190 (71.9 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 89/365 (24%), Positives = 153/365 (41%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR--PQD---KVLVAFSGS 118
C C+ + LR + + C+ C +++N K + ++ R P+ K+L+ S
Sbjct: 10 CVDCSDAEAILTLRTRRL-CQTCYARFVNFKVFKRMENYRLRRNMPKTGPCKLLLPLSCG 68
Query: 119 HSSMALLHLLQEGMQLS---SHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
SS LLH+L +QL SH F + + I+ SIS S S + T +
Sbjct: 69 ISSSVLLHILNAQIQLELAKSHPSPGFDLHVLVIEPSSISHSSPSYDEGFGLLQQTFPLH 128
Query: 176 FDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKM-----FQ-TVTTLSSRXXXX 229
+ L E D +L +++ + F D+ ++ F+ ++ T +S+
Sbjct: 129 SFTRIP-LHSIFELDP-ELQEVISQFSKDGFVDDAGLSAKERLDAFRASIPTSTSKVDVD 186
Query: 230 XXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDII 289
AKK+ C + ++ T LA K +AN++ G+G+ + V G
Sbjct: 187 YVLITRLVVAFAKKIACRGVLWGDSDTRLAAKTLANVAKGRGSSLTWQVCDGMSPFGVEF 246
Query: 290 TLRPLRDFSSKEVIYY-NIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTN---FP 345
PLRD EV Y + F +L+ + +P + L E + +QT +P
Sbjct: 247 NF-PLRDLFKAEVDNYASFFPELTRIIIPDEPPSENVLTKNLSIDELMMRYVQTQGEKYP 305
Query: 346 STVSTVFRTADKLSLDLTSMNVNNTCLLCKA-PLDTRADLASSSMGATRFSR--YVSNAT 402
++ V RTA KL LT NV C C A L++ + + GA+R Y +
Sbjct: 306 GVMANVTRTASKLQASLTPANVPQ-CSFCGAFMLNSGNNGGGDTTGASRALELCYACTRS 364
Query: 403 REQLS 407
R +L+
Sbjct: 365 RPELT 369
>UNIPROTKB|Q2U667 [details] [associations]
symbol:ncs2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:510516 "Aspergillus oryzae RIB40" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 HOGENOM:HOG000089454 OrthoDB:EOG4XKZGZ
EMBL:AP007166 RefSeq:XP_001824081.1 EnsemblFungi:CADAORAT00011496
GeneID:5996340 GenomeReviews:AP007166_GR KEGG:aor:AOR_1_640094
Uniprot:Q2U667
Length = 361
Score = 188 (71.2 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 83/336 (24%), Positives = 146/336 (43%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMR--PQDK---VLVAFSGS 118
C C + LR + + CK C ++++++K + ++ R +DK +L S
Sbjct: 10 CVDCRDAEAILTLRRRRL-CKDCYIKFVSYKVFKRMENYRLNRGFAKDKPCKLLFPLSYG 68
Query: 119 HSSMALLHLLQEGMQLSS---HKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
SS LLH+L + +++ H F + + I+ +IS A++ A K
Sbjct: 69 LSSSVLLHMLHDQLEVQRSKVHGSPGFDLHVLIIEPSTISP----SNPAHDEGFELAQKC 124
Query: 176 FD-SYFTCLEQ----ALEPDNMKLYTDVAELPLEQ--FAKDSE-INKMFQTVTTLSSRXX 227
F FT + AL PD + + A E D+E +N + T +S+
Sbjct: 125 FPLCSFTKVPFHSIFALVPDIKETMSQFAGKGFEDDPSLSDAERLNAFRSCIATSTSKAD 184
Query: 228 XXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD 287
AK+++C I ++ + LA K +AN++ G+G+ V V SD +
Sbjct: 185 VDHILMNRLIVAFAKQMDCQAIIWGDSDSRLAAKTLANVAKGRGSSVIWQV--SDGMSPF 242
Query: 288 IITLR-PLRDFSSKEVI-YYNIFNDLSPVHVPSLATLADPLA---SLQKAAESFVTDLQT 342
+ PLRD + E+ Y + F +L+ + VP A+ L S+ + +V
Sbjct: 243 GLEFNFPLRDLFTAELRDYASFFPELTKLIVPDEPLPANTLTKNLSIDELMMRYVLTQGE 302
Query: 343 NFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPL 378
+P + V RTA+KL + N+++ C C APL
Sbjct: 303 KYPGVMLNVTRTANKLDVSQMPANLSH-CTFCAAPL 337
>UNIPROTKB|Q6CF50 [details] [associations]
symbol:NCS2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:284591 "Yarrowia lipolytica CLIB122" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR007110 GO:GO:0005829 GO:GO:0000049
GO:GO:0002098 GO:GO:0034227 KO:K14169 InterPro:IPR019407
Pfam:PF10288 eggNOG:NOG308629 OMA:KQRKQMM OrthoDB:EOG4KPXKW
EMBL:CR382128 RefSeq:XP_500712.1 ProteinModelPortal:Q6CF50
STRING:Q6CF50 GeneID:2906688 GenomeReviews:CR382128_GR
KEGG:yli:YALI0B10263g Uniprot:Q6CF50
Length = 424
Score = 186 (70.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 72/298 (24%), Positives = 126/298 (42%)
Query: 104 MMRPQDKVLVAFSGSHSSMALLHLLQEGM--QLSSHKRIL-FSVCAIYIDDGSISQVSIS 160
++ P +LV S SS+ALL + + Q +++ F++ A++ID S+
Sbjct: 53 VLPPAINILVPISFGQSSLALLDMAHAQLEEQAKTYENAAGFTLNAVFID---CSEADPL 109
Query: 161 ERKANNAQIATAMKYFDSYFTC--LEQALEPDN---MKLYTDVAELPLEQFAKDSEINKM 215
E++ N ++ + FTC L +A E + +K D + + + ++
Sbjct: 110 EKEPNQIISELEKRFAHAKFTCIPLSKAFEGASSVTLKHNRDYTSFVSGISEEPTSVQQL 169
Query: 216 FQTVTTLSSRXXXXXXXXXXXXXXAAKKLN---CTKIFTAETQTDLATKIIANISLGKGA 272
+ T S+R AKK N T + T LA ++ G+G
Sbjct: 170 LSCIGTKSAREDIISVLQRHLIIEEAKKQNESLPTTVAWGHNATRLAELTLSLTIKGRGN 229
Query: 273 HVPLDV---GFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLA-- 327
+ V D + + PL D S E+ +YN F ++S + V +++ +
Sbjct: 230 RIHAQVLEHKNPKDSISGLPEIHPLNDVLSYEIPFYNSFRNVSDLAVDTVSKPSQVTKNL 289
Query: 328 SLQKAAESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLA 385
S+ + + ++QTNFPS STV RTA KL + CL+C +P+D LA
Sbjct: 290 SIDQLMHQYFENIQTNFPSIASTVVRTAAKLDDPNAAKQGLTPCLICASPVDPNQSLA 347
Score = 43 (20.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 21/92 (22%), Positives = 36/92 (39%)
Query: 400 NATREQLSHVIISSESPDHASKVTTDVNQTVGSQDIPEKSVNGSEDIPNQIVNGMQYTPN 459
NA ++ L+ +I + D + N TV PE E++ + M+ +
Sbjct: 324 NAAKQGLTPCLICASPVDPNQSLAWLTNITVNEPAAPE--TEEEEELSKKA--HMEKS-Q 378
Query: 460 EKVSRTEDNEGPDNLQRSLCYACQYVVKDMTS 491
EK + + NL CY C ++D S
Sbjct: 379 EKTGDADRHLPVPNL----CYGCIITIRDTDS 406
>UNIPROTKB|A1CBI6 [details] [associations]
symbol:ncs2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:344612 "Aspergillus clavatus NRRL 1" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 EMBL:DS027049 RefSeq:XP_001274530.1
EnsemblFungi:CADACLAT00001539 GeneID:4706433 KEGG:act:ACLA_015460
HOGENOM:HOG000089454 OrthoDB:EOG4XKZGZ Uniprot:A1CBI6
Length = 374
Score = 174 (66.3 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 80/332 (24%), Positives = 138/332 (41%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQD-----KVLVAFSGS 118
C C + +R + + C+ C +++N K + ++ R K+L+ S
Sbjct: 10 CVDCADAEAILTVRCRRL-CQDCYARFVNFKVFKRMENYRLRRNMSRTGPCKLLLPLSYG 68
Query: 119 HSSMALLHLLQEGMQ---LSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKY 175
SS LLH+L +Q SH F + + I+ ++S S ++ +
Sbjct: 69 TSSSVLLHILNAQIQHERAKSHPSPGFELHVLVIEPSTVSTSS----PPHDEGFDLLQQT 124
Query: 176 FDSY-FT--CLEQALEPDNMKLYTDVAELPLEQFAKD---SEINKM--FQ-TVTTLSSRX 226
F S+ FT L E D + +++ E F D S+ +++ F+ ++TT +SR
Sbjct: 125 FPSHSFTRVSLHNVFELDP-SIQDVLSQFSSEGFTDDATMSDKDRLDAFRASITTATSRV 183
Query: 227 XXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
AKK+ C + ++ T LA K +AN++ G+G+ + V G
Sbjct: 184 DVDYILITRLVVAFAKKIECRGVVWGDSDTRLAAKTLANVAKGRGSAITWQVCDGMSPFG 243
Query: 287 DIITLRPLRDFSSKEVIYY-NIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTN-- 343
+ PLRD EV Y + F +L+ + +P + L E + +QT
Sbjct: 244 LEFSF-PLRDLYKAEVQNYASFFPELAKIIIPDEPPSENILTKNLSIDELMMRYVQTQGE 302
Query: 344 -FPSTVSTVFRTADKLSLDLTSMNVNNTCLLC 374
+P ++ V RTA KL L NV C C
Sbjct: 303 KYPGIMANVTRTASKLQASLVPANVPR-CSFC 333
>UNIPROTKB|B0Y1E7 [details] [associations]
symbol:ncs2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:451804 "Aspergillus fumigatus A1163" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 InterPro:IPR019407 Pfam:PF10288 HOGENOM:HOG000089454
EMBL:DS499597 EnsemblFungi:CADAFUBT00005987 Uniprot:B0Y1E7
Length = 364
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 80/329 (24%), Positives = 137/329 (41%)
Query: 84 KACLLQYLNHKFRAALGKSKMMR--PQD---KVLVAFSGSHSSMALLHLLQEGMQ---LS 135
+ C +++N K + ++ R P+ K+L+ S SS LLH+L +Q
Sbjct: 23 RTCYARFVNFKVFKRMENYRLRRNMPRTGPCKLLLPLSCGISSSVLLHILNAQIQHELAK 82
Query: 136 SHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLY 195
SH F + + I+ SIS S+S + T + + L E D +L
Sbjct: 83 SHPSPGFDLHLLVIEPSSISHSSLSYDEGFELLQQTFPLHSFTRIP-LHSIFELDP-ELQ 140
Query: 196 TDVAELPLEQFAKDSEINKM-----FQ-TVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKI 249
+++ + F D+ ++ F+ ++ T +S+ AKK+ C +
Sbjct: 141 EVISQFSKDGFVDDTGLSAKERLDAFRASIPTSTSKVDVDYILITRLVVAFAKKIACRGV 200
Query: 250 FTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYY-NIF 308
+T T LA K +AN++ G+G+ + V G PLRD EV Y + F
Sbjct: 201 LWGDTDTRLAAKTLANVAKGRGSSLTWQVCDGMSPFGVEFNF-PLRDLFKAEVDNYASFF 259
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTN---FPSTVSTVFRTADKLSLDLTSM 365
+L+ + +P + L E + +QT +P ++ V RTA KL L
Sbjct: 260 PELTRIIIPDEPPSENVLTKNLSIDELMMRYVQTQGEKYPGVMANVTRTASKLQASLMPA 319
Query: 366 NVNNTCLLCKA-PLDTRADLASSSMGATR 393
NV C C A L++ + + GA+R
Sbjct: 320 NVPQ-CSFCGAFMLNSGNNDGGDTTGASR 347
>UNIPROTKB|Q4WVK2 [details] [associations]
symbol:ncs2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:330879 "Aspergillus fumigatus Af293" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 EMBL:AAHF01000003
GO:GO:0002098 GO:GO:0034227 KO:K14169 InterPro:IPR019407
Pfam:PF10288 HOGENOM:HOG000089454 OrthoDB:EOG4XKZGZ
RefSeq:XP_753412.1 EnsemblFungi:CADAFUAT00006245 GeneID:3511355
GenomeReviews:CM000173_GR KEGG:afm:AFUA_5G12400 eggNOG:NOG302050
OMA:HELAKSH Uniprot:Q4WVK2
Length = 364
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 80/329 (24%), Positives = 137/329 (41%)
Query: 84 KACLLQYLNHKFRAALGKSKMMR--PQD---KVLVAFSGSHSSMALLHLLQEGMQ---LS 135
+ C +++N K + ++ R P+ K+L+ S SS LLH+L +Q
Sbjct: 23 RTCYARFVNFKVFKRMENYRLRRNMPRTGPCKLLLPLSCGISSSVLLHILNAQIQHELAK 82
Query: 136 SHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLY 195
SH F + + I+ SIS S+S + T + + L E D +L
Sbjct: 83 SHPSPGFDLHLLVIEPSSISHSSLSYDEGFELLQQTFPLHSFTRIP-LHSIFELDP-ELQ 140
Query: 196 TDVAELPLEQFAKDSEINKM-----FQ-TVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKI 249
+++ + F D+ ++ F+ ++ T +S+ AKK+ C +
Sbjct: 141 EVISQFSKDGFVDDTGLSAKERLDAFRASIPTSTSKVDVDYILITRLVVAFAKKIACRGV 200
Query: 250 FTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYY-NIF 308
+T T LA K +AN++ G+G+ + V G PLRD EV Y + F
Sbjct: 201 LWGDTDTRLAAKTLANVAKGRGSSLTWQVCDGMSPFGVEFNF-PLRDLFKAEVDNYASFF 259
Query: 309 NDLSPVHVPSLATLADPLASLQKAAESFVTDLQTN---FPSTVSTVFRTADKLSLDLTSM 365
+L+ + +P + L E + +QT +P ++ V RTA KL L
Sbjct: 260 PELTRIIIPDEPPSENVLTKNLSIDELMMRYVQTQGEKYPGVMANVTRTASKLQASLMPA 319
Query: 366 NVNNTCLLCKA-PLDTRADLASSSMGATR 393
NV C C A L++ + + GA+R
Sbjct: 320 NVPQ-CSFCGAFMLNSGNNDGGDTTGASR 347
>UNIPROTKB|A5DAK5 [details] [associations]
symbol:NCS2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:294746 "Meyerozyma guilliermondii ATCC 6260" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 KO:K14169 InterPro:IPR019407 Pfam:PF10288
OrthoDB:EOG4KPXKW eggNOG:NOG302050 EMBL:CH408155
RefSeq:XP_001486933.1 STRING:A5DAK5 PRIDE:A5DAK5 GeneID:5128977
KEGG:pgu:PGUG_00310 Uniprot:A5DAK5
Length = 420
Score = 149 (57.5 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 84/337 (24%), Positives = 139/337 (41%)
Query: 64 CPRCNTNNGEVVLRLKDIY--CKACLL---QYLNHKFRAALGKSKMMRPQDKVLVAFSGS 118
C RC+T + ++ R ++ C + Q + + A K K + +VL+A SG
Sbjct: 14 CQRCSTKDAVLLARRENYCGDCFIRFIRGKQRRSMQDEAYKVKYKTVENPHRVLLALSGG 73
Query: 119 HSSMALLH----LLQEGMQLSSHK-RILFSVCAIYID-------DGSISQVSISERKANN 166
SS+ LL LLQE Q H R F++ + +D D S + ISE K+
Sbjct: 74 SSSLVLLDAVASLLQE--QAGQHGGRQGFALTVVNVDERERLKLDKSFQDI-ISELKSRY 130
Query: 167 AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAE--LPLEQFAKDSEINKMFQTVTTLSS 224
+ D Y ++ L ++K+ +D + +PL K + IN + + + SS
Sbjct: 131 LPVDIDFVSLD-YDMYVDGRLL-HHIKVASDFSSYSIPLN---KGTNINDILKGCNSKSS 185
Query: 225 RXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV-GFSDD 283
A C + + T LA +++A G+G+ + V +++
Sbjct: 186 EEDLLSIILNELLLKTAITHQCGTLLYGHSMTRLADEVLALTIKGRGSTIHSSVLDHTEE 245
Query: 284 RTGDIITLR-PLRDFSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDL-- 340
+G I ++ PLRD E+ Y L V + S T+ DP+ + K
Sbjct: 246 ISGQTINVKYPLRDVLMGEIEAYCKLAKLDSVVMSS--TIPDPVINKNKTVRGLTAQYFR 303
Query: 341 ---QTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLC 374
T + ST STV RTA KL+ + TC +C
Sbjct: 304 QLDATGYSSTASTVVRTAAKLAAPTVGTK-SGTCKVC 339
Score = 49 (22.3 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 21/63 (33%), Positives = 25/63 (39%)
Query: 447 PNQIVNGMQYTPNEKVSRT--EDNE-GPDNL-----QRSLCYACQYVVKDMTS------D 492
P+Q + + NEKV E E G D Q LCY C + D S D
Sbjct: 347 PHQWLRRITVAENEKVENNSEESGEIGADKKEDVGEQIDLCYGCTVTIGDAPSFRWPLSD 406
Query: 493 KDI 495
KDI
Sbjct: 407 KDI 409
>UNIPROTKB|A5DSD3 [details] [associations]
symbol:NCS2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:379508 "Lodderomyces elongisporus NRRL YB-4239" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629 OMA:KQRKQMM
OrthoDB:EOG4KPXKW EMBL:CH981524 RefSeq:XP_001527749.1
ProteinModelPortal:A5DSD3 STRING:A5DSD3 GeneID:5235476
KEGG:lel:LELG_00269 Uniprot:A5DSD3
Length = 448
Score = 102 (41.0 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 54/204 (26%), Positives = 94/204 (46%)
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV-GFSDDRTGDIITL-RPLRDFS 298
A+ C I + + LA +++A G+G++V + +D GD I++ P RD
Sbjct: 210 AQSEGCGTIVYGHSMSRLAIEVLALTVKGRGSNVHSTILDRVEDYCGDQISIIYPFRDLF 269
Query: 299 SKEVIYYNIFNDLSPVHVPSLATLADPLASLQK---AAE--SFVTDL--QTNFPSTVSTV 351
E+ Y + +DL + + A A P + + K E S D ++ + ST STV
Sbjct: 270 EYELREYAVLSDLMQ-YESAFAKYAVPKSKVSKNMTVREILSMYLDRWDESGYLSTASTV 328
Query: 352 FRTADKLSLDLTSMNVNNT--CLLCKAPL--DTRADLASSSMGATRFSRYVSNATREQLS 407
+ +KL++ TS N ++T C +C + D + L ++ + VS+ R+ L
Sbjct: 329 VKIGEKLTVP-TSQNNSSTYCCDICAKKIYQDPKDWLQMITVNEP--APLVSDEERDYL- 384
Query: 408 HVIISSESPDHASKVTTDVNQTVG 431
H ++S + D SK VN G
Sbjct: 385 HQYLTSHT-DTISKSGEHVNLCYG 407
Score = 99 (39.9 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 64 CPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALG----KSKMMRP-----QDKVLVA 114
C +C+ G ++ D+YCK C L+++ K R + K K +R +KVL+A
Sbjct: 14 CLKCD--EGAIIKVRSDVYCKQCYLRFIRGKQRKQMSSDKYKVKYLRDGASHSTEKVLLA 71
Query: 115 FSGSHSSMALLHLLQEGM--QLSSHK 138
FSG SS+ LL +L + Q ++H+
Sbjct: 72 FSGGVSSLVLLDVLARLLEEQKNTHR 97
>UNIPROTKB|A6QYX4 [details] [associations]
symbol:NCS2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:339724 "Ajellomyces capsulatus NAm1" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 GO:GO:0002098
GO:GO:0034227 KO:K14169 InterPro:IPR019407 Pfam:PF10288
EMBL:CH476656 RefSeq:XP_001542410.1 GeneID:5449353
KEGG:aje:HCAG_02581 Uniprot:A6QYX4
Length = 359
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 76/312 (24%), Positives = 134/312 (42%)
Query: 108 QDKVLVAFSGSHSSMALLHLL--QEGMQLSSHK-RILFSVCAIYIDDGSISQVSISERKA 164
Q K+L+ S SS LLH+L Q Q+SS R + + + I G+ Q S S R
Sbjct: 34 QRKLLLPLSYGISSSTLLHILNLQLERQISSGLGRRAYDIHVLNI--GTCEQ-SDSHRLG 90
Query: 165 NNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKD-SEINK----MFQ-T 218
+ Y L + D + ++E +FA D S+ ++ +F+ +
Sbjct: 91 LFREAYPLHTYTQ---VPLHSIFKHDTT-IKDVISEYGGPEFADDPSKTDQERLDIFRLS 146
Query: 219 VTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDV 278
++T ++R AK+ +C I ++ T LA+K ++N++ G+G VP DV
Sbjct: 147 LSTATARADIDGILLTRLVVAIAKEQDCDGILWGDSDTRLASKALSNVAKGRGFSVPWDV 206
Query: 279 GFSDDRTGDIITLRPLRDFSSKEVIYYNIF---NDLSPVHV--PSLATLADPLASLQKAA 333
G P+RD E+ Y L+ V PS+ L++ S++
Sbjct: 207 CDGMSPWGIQFNF-PMRDLFKFELSTYASLALPKSLNVVDSERPSVDNLSNKNMSIEDLL 265
Query: 334 ESFVTDLQTNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATR 393
+V +P ++ + RT +KL S + ++ C+LC P+D + + +G
Sbjct: 266 AHYVETQGQKYPGVMANIVRTINKLQPQ--SADTDHKCMLCGMPVDYSGE-DPAIIGGQG 322
Query: 394 FSRYVSNATREQ 405
S+Y RE+
Sbjct: 323 SSQYTLQDWRER 334
>UNIPROTKB|Q5FW05 [details] [associations]
symbol:ctu1 "Cytoplasmic tRNA 2-thiolation protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 CTD:90353 GeneTree:ENSGT00390000001041
HOVERGEN:HBG100428 OrthoDB:EOG4SBF02 EMBL:BC089678
RefSeq:NP_001015743.1 UniGene:Str.20338 ProteinModelPortal:Q5FW05
STRING:Q5FW05 Ensembl:ENSXETT00000008736 GeneID:548460
KEGG:xtr:548460 Xenbase:XB-GENE-5872210 InParanoid:Q5FW05
OMA:ECIYSPE Bgee:Q5FW05 Uniprot:Q5FW05
Length = 341
Score = 105 (42.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 35/135 (25%), Positives = 56/135 (41%)
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSK 300
A L KI T D+A ++ N G A + + G I +PL+ K
Sbjct: 155 AMMLGVNKICTGHNADDIAETVLMNFLRGDIARLRRCTSITTGSEGAIPRCKPLKYAYEK 214
Query: 301 EVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL 360
E++ Y F L S + P A + A +F+ DL+ PS++ + + + LS+
Sbjct: 215 EIVLYAYFKKLDYF---STECIYSPNA-YRGHARAFLKDLEAIRPSSIMDIIHSGENLSV 270
Query: 361 -DLTSMNVNNTCLLC 374
+ M V TC C
Sbjct: 271 KEDVRMPVQGTCTRC 285
Score = 76 (31.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 30/137 (21%), Positives = 53/137 (38%)
Query: 64 CPRCNTNNGEVVLRLKDIY--CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
C C V+ R K + CK C + + +K+ P +KV + SG S
Sbjct: 5 CSSCEERRA-VLRRPKTGHSLCKDCFFHAFEEEIHHTIVSAKLFNPGEKVGIGASGGKDS 63
Query: 122 MALLHLLQEGMQLSSHKRILFSVCAIYIDDG--SISQVSISERKANNAQIATAMK---YF 176
L H+L+ L+ + + +D+G S+ K N Q +K Y
Sbjct: 64 TVLAHVLKV---LNERYAYGLDLILVSVDEGISGYRDDSLETVKRNQQQYELPLKIVSYQ 120
Query: 177 DSYFTCLEQALEPDNMK 193
+ Y ++Q ++ +K
Sbjct: 121 ELYGWTMDQIVKQVGLK 137
>UNIPROTKB|Q05AW7 [details] [associations]
symbol:ctu1 "Cytoplasmic tRNA 2-thiolation protein 1"
species:8355 "Xenopus laevis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
KO:K14168 GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269
PROSITE:PS01263 InterPro:IPR020554 CTD:90353 HOVERGEN:HBG100428
EMBL:BC123240 RefSeq:NP_001090363.1 UniGene:Xl.34877
ProteinModelPortal:Q05AW7 GeneID:779274 KEGG:xla:779274
Xenbase:XB-GENE-5872246 Uniprot:Q05AW7
Length = 341
Score = 101 (40.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 35/135 (25%), Positives = 55/135 (40%)
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSK 300
A L KI T D+A ++ N G A + + G I +PL+ K
Sbjct: 155 AMMLGINKICTGHNADDIAETVLMNFLRGDIARLRRCTAITTGSEGAIPRCKPLKYTYEK 214
Query: 301 EVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLSL 360
E++ Y F L S + P A + A F+ DL+ PS++ + + + LS+
Sbjct: 215 EIVLYAYFKKLDYF---STECIYSPNA-YRGHARVFLKDLEAIRPSSIIDIIHSGENLSV 270
Query: 361 DL-TSMNVNNTCLLC 374
+ M V TC C
Sbjct: 271 NEDVRMPVQGTCTRC 285
Score = 73 (30.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 24/116 (20%), Positives = 46/116 (39%)
Query: 83 CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRILF 142
CK C + + +K+ P +KV + SG S L H+++ L+
Sbjct: 25 CKDCFFYAFEEEIHNTIVSAKLFHPGEKVGIGASGGKDSTVLAHVMKV---LNERYAYGL 81
Query: 143 SVCAIYIDDG--SISQVSISERKANNAQIATAMK---YFDSYFTCLEQALEPDNMK 193
+ + +D+G S+ K N Q +K Y + Y ++Q ++ +K
Sbjct: 82 DLILLSVDEGISGYRDDSLQTVKRNQQQYELPLKIVSYLELYGWTMDQIVKQVGLK 137
>TAIR|locus:2125359 [details] [associations]
symbol:AT4G35910 "AT4G35910" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] UniPathway:UPA00988 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL031986 EMBL:AL161588 GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AL022373 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629 EMBL:AK175937
EMBL:AK220738 EMBL:BT029183 EMBL:AY085266 IPI:IPI00521356
PIR:T04701 RefSeq:NP_567993.1 UniGene:At.31372
ProteinModelPortal:O65628 PaxDb:O65628 PRIDE:O65628
EnsemblPlants:AT4G35910.1 GeneID:829746 KEGG:ath:AT4G35910
TAIR:At4g35910 HOGENOM:HOG000006111 InParanoid:Q058N5 OMA:RECTIVR
ProtClustDB:CLSN2689780 Genevestigator:O65628 Uniprot:O65628
Length = 458
Score = 132 (51.5 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 70/284 (24%), Positives = 109/284 (38%)
Query: 82 YCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKRIL 141
+C C + KFR A+ M+ P D VLVAFSG SS L + E +Q+ + K
Sbjct: 59 FCADCFRNNVFGKFRLAVTSHAMITPSDNVLVAFSGGSSSRVSLQFVHE-LQIKALKNYE 117
Query: 142 FSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAEL 201
S G + + E A A ++T M + L P L+ +
Sbjct: 118 ASRDRSLPVFG-VGVAFVDETAAFPA-LSTEMIDAIEWVRYTVSCLSPPAKDLHV----V 171
Query: 202 PLEQ-FAKDS-----EINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQ 255
P+E F DS + K+ +V + + A + ++
Sbjct: 172 PVESIFGSDSLDARDRLLKLLDSVPDDTGKEDLLLHLKMLSLQKVAAENGYNRLVLGSCT 231
Query: 256 TDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRDFSSKEVIYYNIFNDLSPVH 315
+ +A+ ++ G+G + D+ D R I L PLRD E+ + + L V
Sbjct: 232 SRIASHVLTATVKGRGYSLSADIQHVDARWKVPIVL-PLRDCVRLEITRLCLLDGLKTVE 290
Query: 316 VPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
LA + + SFV LQ PS T+ RTA KL+
Sbjct: 291 ---LACRSQ--CGINDLVSSFVALLQEENPSRECTIVRTAAKLT 329
Score = 37 (18.1 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 364 SMNVNNTCLLCKAPLDTRAD 383
SM C +C PL+ R+D
Sbjct: 362 SMTTEAFCPICNGPLN-RSD 380
>UNIPROTKB|Q28ZC1 [details] [associations]
symbol:GA20807 "Cytoplasmic tRNA 2-thiolation protein 1"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 InterPro:IPR000541 InterPro:IPR012089
PIRSF:PIRSF004976 Pfam:PF01171 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 EMBL:CM000071 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 eggNOG:COG0037 KO:K14168
OrthoDB:EOG4C867X GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 InterPro:IPR020554
RefSeq:XP_001361116.2 ProteinModelPortal:Q28ZC1 GeneID:4804577
KEGG:dpo:Dpse_GA20807 FlyBase:FBgn0080797 InParanoid:Q28ZC1
Uniprot:Q28ZC1
Length = 343
Score = 92 (37.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 39/138 (28%), Positives = 63/138 (45%)
Query: 243 KLNCT-KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG---DIIT-LRPLRDF 297
KL C I T D+A ++ N+ G A + +D RTG D I ++PL+
Sbjct: 156 KLLCVDSIATGHNADDIAETVLMNVLRGDTARLRR---CTDIRTGGGEDSIPRVKPLKYS 212
Query: 298 SSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK 357
KE++ Y + L V+ + A P A + A +F+ DL+ PS + + + ++
Sbjct: 213 YEKEIVMYAHYKKL--VYFSTECVFA-PNA-YRGHARAFLKDLEKVRPSVIMDIIYSGEQ 268
Query: 358 LSLDLTSMN-VNNTCLLC 374
L T+ N V TC C
Sbjct: 269 LRFKDTAKNPVRGTCNRC 286
Score = 75 (31.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 80 DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQ 129
D CK C + + SK+ R +KV VA SG S L H+++
Sbjct: 22 DALCKECFFAAFEAEIHHTITSSKLFRRGEKVAVAASGGKDSTVLAHVMK 71
>ASPGD|ASPL0000062742 [details] [associations]
symbol:AN0062 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0002144 "cytosolic tRNA
wobble base thiouridylase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0001403 "invasive growth in
response to glucose limitation" evidence=IEA] [GO:0007124
"pseudohyphal growth" evidence=IEA] [GO:0032447 "protein
urmylation" evidence=IEA] [GO:0002143 "tRNA wobble position uridine
thiolation" evidence=IEA] UniPathway:UPA00988 GO:GO:0005737
EMBL:BN001308 GO:GO:0008033 EMBL:AACD01000003 KO:K14169
InterPro:IPR019407 Pfam:PF10288 HOGENOM:HOG000089454
OrthoDB:EOG4XKZGZ eggNOG:NOG302050 OMA:HELAKSH RefSeq:XP_657666.1
EnsemblFungi:CADANIAT00002690 GeneID:2875839 KEGG:ani:AN0062.2
Uniprot:Q5BHB8
Length = 292
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 63/264 (23%), Positives = 111/264 (42%)
Query: 124 LLHLLQEGMQLSSHKRILFSVCAIYIDDGSISQVSISERKANNAQIATAMKYFDSYFTCL 183
++H E + H F + + ++ SIS + S R A Q+ ++ + FT L
Sbjct: 1 MVHGQVERLLTKPHPPPGFELHVLIVEPSSISPSNPSHRGA--FQLLQ-QQFPHASFTQL 57
Query: 184 EQALEPDNMKLYTDV-AELPLEQFAKDSEI-NK----MFQ-TVTTLSSRXXXXXXXXXXX 236
D + D+ AE F D+ + +K F+ ++T+ +S
Sbjct: 58 PLHSVFDYVSGLNDILAEYVGPAFVDDTSLPSKERLDAFRASITSATSAADVDSVLLNRL 117
Query: 237 XXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIITLRPLRD 296
A+ L C I ++ LA K +AN+S G+G+ + V G + PLRD
Sbjct: 118 IIAFARSLGCLGIIWGDSDDRLAAKTLANVSKGRGSSLTWQVSDGTSPFGLEFSF-PLRD 176
Query: 297 FSSKEV-IYYNIFNDLSPVHVPSLATLADPLA----SLQKAAESFVTDLQTNFPSTVSTV 351
+ E+ Y N F +L + +P L+D + S+ + +V+ +P +S V
Sbjct: 177 LFTAELQSYANFFPELLNIIIPD-GPLSDNILTKNLSIDQLMMRYVSSQGAKYPGVMSNV 235
Query: 352 FRTADKLSLDLTSMNVNNT-CLLC 374
RT +KL + + M + C LC
Sbjct: 236 TRTVNKL--ESSRMITDGLRCALC 257
>UNIPROTKB|B4NN33 [details] [associations]
symbol:GK22963 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7260 "Drosophila willistoni" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 KO:K14168 OMA:YEELYGW OrthoDB:EOG4C867X
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 EMBL:CH964282 RefSeq:XP_002074786.1
ProteinModelPortal:B4NN33 STRING:B4NN33 EnsemblMetazoa:FBtr0253614
GeneID:6652355 KEGG:dwi:Dwil_GK22963 FlyBase:FBgn0224925
InParanoid:B4NN33 Uniprot:B4NN33
Length = 343
Score = 90 (36.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 37/139 (26%), Positives = 60/139 (43%)
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG----DIITLRPLRD 296
AK L I T D+A ++ NI G A + +D RTG I ++PL+
Sbjct: 155 AKLLQVDSIATGHNADDIAETVLMNILRGDTARLRR---CTDIRTGGGEDSIPRVKPLKY 211
Query: 297 FSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
K+++ Y + L V+ + A P A + A +F+ DL+ PS + + + +
Sbjct: 212 SYEKDIVMYAHYKKL--VYFSTECVFA-PNA-YRGHARAFLKDLEKVRPSVIMDIIYSGE 267
Query: 357 KLSL-DLTSMNVNNTCLLC 374
+L D V TC C
Sbjct: 268 QLRFKDTVKKPVRGTCSRC 286
Score = 76 (31.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 71 NGEVVLRLK--DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLL 128
N V+ R K D CK C + + +++ +P K+ VA SG S L H+L
Sbjct: 11 NRAVLRRPKTGDALCKECFFAAFEAEIHHTISSNQLFQPGQKIAVAASGGKDSTVLAHVL 70
Query: 129 Q 129
+
Sbjct: 71 K 71
>UNIPROTKB|B4LM02 [details] [associations]
symbol:GJ21203 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7244 "Drosophila virilis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 EMBL:CH940648 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 KO:K14168 OMA:YEELYGW
OrthoDB:EOG4C867X GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 InterPro:IPR020554
RefSeq:XP_002048729.1 ProteinModelPortal:B4LM02 STRING:B4LM02
EnsemblMetazoa:FBtr0237128 GeneID:6626387 KEGG:dvi:Dvir_GJ21203
FlyBase:FBgn0208336 InParanoid:B4LM02 Uniprot:B4LM02
Length = 343
Score = 86 (35.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 37/139 (26%), Positives = 59/139 (42%)
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG----DIITLRPLRD 296
AK L I T D+A ++ NI G A + +D RTG I ++PL+
Sbjct: 155 AKLLGVDSIATGHNADDIAETVLMNILRGDTARLRR---CTDIRTGGSEDSIPRVKPLKY 211
Query: 297 FSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
KE++ Y + L V+ + A P A + A +F+ DL+ PS + + + +
Sbjct: 212 SYEKEIVMYAHYKKL--VYFSTECVFA-PNA-YRGHARAFLKDLEKVRPSVIMDIIYSGE 267
Query: 357 KLSL-DLTSMNVNNTCLLC 374
+L D V C C
Sbjct: 268 QLRFKDTVKKPVRGICERC 286
Score = 80 (33.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 80 DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQ 129
D CKAC + + SK+ R +KV VA SG S L H+L+
Sbjct: 22 DALCKACFFAAFEAEIHHTIISSKLFRRGEKVAVAASGGKDSTVLAHVLK 71
>CGD|CAL0001191 [details] [associations]
symbol:orf19.4399 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002144 "cytosolic tRNA wobble base thiouridylase
complex" evidence=IEA] [GO:0007124 "pseudohyphal growth"
evidence=IEA] [GO:0001403 "invasive growth in response to glucose
limitation" evidence=IEA] [GO:0032447 "protein urmylation"
evidence=IEA] [GO:0002143 "tRNA wobble position uridine thiolation"
evidence=IEA] UniPathway:UPA00988 CGD:CAL0001191 GO:GO:0005829
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
GO:GO:0034227 KO:K14169 InterPro:IPR019407 Pfam:PF10288
eggNOG:NOG308629 EMBL:AACQ01000091 EMBL:AACQ01000090
RefSeq:XP_715124.1 RefSeq:XP_715175.1 ProteinModelPortal:Q59ZY9
STRING:Q59ZY9 GeneID:3643216 GeneID:3643275 KEGG:cal:CaO19.11877
KEGG:cal:CaO19.4399 Uniprot:Q59ZY9
Length = 452
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 78/384 (20%), Positives = 151/384 (39%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
+R +KLC C LR K ++ + +++ G++ ++L+A SG
Sbjct: 26 ARVEKLCSNCYIRFIRGKLR-KQMH---------DERYKVKFGRAVEQYGTQRILLALSG 75
Query: 118 SHSSMALLHLLQEGMQLSS--HK-RILFSVCAIYIDDGSISQVS--ISE------RKANN 166
SS+ LL +L +Q + HK + F + + +D+ + ++ I + K
Sbjct: 76 GESSLVLLDILGSLLQDQNELHKGKQGFELVVVNLDEYELDSLNNRIQKVFPELLAKYQP 135
Query: 167 AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRX 226
+I+ + DSY E++L + L D + + ++ + SS
Sbjct: 136 VKISLNVLSLDSYVD--EESLH--RILLTPDFRAMSKSLDPTRVTLTEILRLCPNKSSAE 191
Query: 227 XXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
A K +C + T LA +IIA G+G+ + + +
Sbjct: 192 DLLTIVYNDLILRVAAKEDCQTVVYGHCMTRLANEIIALTVKGRGSIIHKSIADHTETID 251
Query: 287 D--IITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA--DPLASLQKAAESFVTDLQ- 341
D I + PLR+ E+ Y +L+ + S + + +++ ++ L
Sbjct: 252 DKEIKVMFPLREILQAEISAYVKLAELNKYVISSTVQKSKINKNLTIRDLTTNYFKQLDA 311
Query: 342 TNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
T + ST STV +T +KL + NV C +C A + + T + ++
Sbjct: 312 TGYASTASTVAKTGEKLG---SPSNVLCQCQICGADIHQNPSNWLKRITVTDPAAITTDE 368
Query: 402 TREQLSHVIISSESPDHASKVTTD 425
+E + +S SPD+ K +D
Sbjct: 369 EKEYYE-MFRASLSPDNEDKNNSD 391
>UNIPROTKB|Q59ZY9 [details] [associations]
symbol:NCS2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:237561 "Candida albicans SC5314" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988 CGD:CAL0001191
GO:GO:0005829 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 GO:GO:0034227 KO:K14169 InterPro:IPR019407
Pfam:PF10288 eggNOG:NOG308629 EMBL:AACQ01000091 EMBL:AACQ01000090
RefSeq:XP_715124.1 RefSeq:XP_715175.1 ProteinModelPortal:Q59ZY9
STRING:Q59ZY9 GeneID:3643216 GeneID:3643275 KEGG:cal:CaO19.11877
KEGG:cal:CaO19.4399 Uniprot:Q59ZY9
Length = 452
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 78/384 (20%), Positives = 151/384 (39%)
Query: 58 SRADKLCPRCNTNNGEVVLRLKDIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSG 117
+R +KLC C LR K ++ + +++ G++ ++L+A SG
Sbjct: 26 ARVEKLCSNCYIRFIRGKLR-KQMH---------DERYKVKFGRAVEQYGTQRILLALSG 75
Query: 118 SHSSMALLHLLQEGMQLSS--HK-RILFSVCAIYIDDGSISQVS--ISE------RKANN 166
SS+ LL +L +Q + HK + F + + +D+ + ++ I + K
Sbjct: 76 GESSLVLLDILGSLLQDQNELHKGKQGFELVVVNLDEYELDSLNNRIQKVFPELLAKYQP 135
Query: 167 AQIATAMKYFDSYFTCLEQALEPDNMKLYTDVAELPLEQFAKDSEINKMFQTVTTLSSRX 226
+I+ + DSY E++L + L D + + ++ + SS
Sbjct: 136 VKISLNVLSLDSYVD--EESLH--RILLTPDFRAMSKSLDPTRVTLTEILRLCPNKSSAE 191
Query: 227 XXXXXXXXXXXXXAAKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG 286
A K +C + T LA +IIA G+G+ + + +
Sbjct: 192 DLLTIVYNDLILRVAAKEDCQTVVYGHCMTRLANEIIALTVKGRGSIIHKSIADHTETID 251
Query: 287 D--IITLRPLRDFSSKEVIYYNIFNDLSPVHVPSLATLA--DPLASLQKAAESFVTDLQ- 341
D I + PLR+ E+ Y +L+ + S + + +++ ++ L
Sbjct: 252 DKEIKVMFPLREILQAEISAYVKLAELNKYVISSTVQKSKINKNLTIRDLTTNYFKQLDA 311
Query: 342 TNFPSTVSTVFRTADKLSLDLTSMNVNNTCLLCKAPLDTRADLASSSMGATRFSRYVSNA 401
T + ST STV +T +KL + NV C +C A + + T + ++
Sbjct: 312 TGYASTASTVAKTGEKLG---SPSNVLCQCQICGADIHQNPSNWLKRITVTDPAAITTDE 368
Query: 402 TREQLSHVIISSESPDHASKVTTD 425
+E + +S SPD+ K +D
Sbjct: 369 EKEYYE-MFRASLSPDNEDKNNSD 391
>UNIPROTKB|A3M0F4 [details] [associations]
symbol:NCS2 "Cytoplasmic tRNA 2-thiolation protein 2"
species:322104 "Scheffersomyces stipitis CBS 6054" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0002098 "tRNA wobble uridine
modification" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0034227 "tRNA thio-modification" evidence=ISS]
UniPathway:UPA00988 GO:GO:0005829 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0002098 GO:GO:0034227 KO:K14169
InterPro:IPR019407 Pfam:PF10288 eggNOG:NOG308629
HOGENOM:HOG000094395 OMA:KQRKQMM OrthoDB:EOG4KPXKW EMBL:CP000502
RefSeq:XP_001386728.2 ProteinModelPortal:A3M0F4 STRING:A3M0F4
GeneID:4840963 GenomeReviews:CP000502_GR KEGG:pic:PICST_50402
Uniprot:A3M0F4
Length = 448
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 71/302 (23%), Positives = 124/302 (41%)
Query: 91 LNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLH----LLQEGMQLSSHK-RILFSVC 145
++ +++ G + Q KVL+A SG SS+ L LLQE Q+ SHK R+ F +
Sbjct: 52 IDERYKVKYGAVQEKIGQQKVLLALSGGVSSLVLTDVVASLLQE--QIESHKGRMGFELV 109
Query: 146 AIYIDDGSISQVS--ISE----RKANNAQIATAMKYFDSYFTCLEQALEPDNM--KLYTD 197
+ ID+ + ++ I E A + K +++A+ + K +T
Sbjct: 110 LLNIDEFELESLNKRIEEILPILVERYAPVNIQYKVLSIESFLIDRAMIQKVLLNKDFTA 169
Query: 198 VAELPLEQFAKDSEINKMFQTVTTLSSRXXXXXXXXXXXXXXAAKKLNCTKIFTAETQTD 257
+A+ ++ K + + M + SS A NC I + T
Sbjct: 170 IAQRLSDEQNKYT-VADMLKLCPNKSSMEDLLTVIYEELILRTAFIENCETIIYGHSMTR 228
Query: 258 LATKIIANISLGKGAHVPLDVGFSDDRTGD--IITLRPLRDFSSKEVIYYNIFNDLSPVH 315
+A +I+A G+G+ V + + D L PLRD E+I Y +L+ +
Sbjct: 229 IANEILALTVRGRGSSVYKAIADHTVQFMDKEFTILFPLRDVLFAEIIAYADLIELNKLE 288
Query: 316 VPSLATLADPLASL--QKAAESFVTDLQ-TNFPSTVSTVFRTADKLSLDLTSMNVNNTCL 372
V S + +L + ++ + L T + ST STV +T +KL + C
Sbjct: 289 VKSTIVKSKITKNLTIRDLTTNYFSHLDATGYASTASTVVKTGEKLGAPQFKHSYGR-CQ 347
Query: 373 LC 374
+C
Sbjct: 348 IC 349
>UNIPROTKB|B4GHY8 [details] [associations]
symbol:GL16852 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7234 "Drosophila persimilis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:CH479183
GO:GO:0002098 KO:K14168 OrthoDB:EOG4C867X GO:GO:0034227
InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 RefSeq:XP_002018269.1 ProteinModelPortal:B4GHY8
EnsemblMetazoa:FBtr0182467 GeneID:6592841 KEGG:dpe:Dper_GL16852
FlyBase:FBgn0154456 Uniprot:B4GHY8
Length = 343
Score = 89 (36.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 243 KLNCT-KIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG---DIIT-LRPLRDF 297
+L C I T D+A ++ N+ G A + +D RTG D I ++PL+
Sbjct: 156 RLLCVDSIATGHNADDIAETVLMNVLRGDTARLRR---CTDIRTGGGEDSIPRVKPLKYS 212
Query: 298 SSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADK 357
KE++ Y + L V+ + A P A + A +F+ DL+ PS + + + ++
Sbjct: 213 YEKEIVMYAHYKKL--VYFSTECVFA-PNA-YRGHARAFLKDLEKVRPSVIMDIIYSGEQ 268
Query: 358 LSLDLTSMN-VNNTCLLC 374
L T+ N V TC C
Sbjct: 269 LRFKDTAKNPVRGTCNRC 286
Score = 75 (31.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 80 DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQ 129
D CK C + + SK+ R +KV VA SG S L H+++
Sbjct: 22 DALCKECFFAAFEAEIHHTITSSKLFRRGEKVAVAASGGKDSTVLAHVMK 71
>ZFIN|ZDB-GENE-040426-704 [details] [associations]
symbol:ctu1 "cytosolic thiouridylase subunit 1
homolog (S. pombe)" species:7955 "Danio rerio" [GO:0034227 "tRNA
thio-modification" evidence=IEA;ISS] [GO:0000049 "tRNA binding"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] UniPathway:UPA00988 InterPro:IPR000541
InterPro:IPR012089 PIRSF:PIRSF004976 Pfam:PF01171
ZFIN:ZDB-GENE-040426-704 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0002098
eggNOG:COG0037 HOGENOM:HOG000225864 KO:K14168 OMA:YEELYGW
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 CTD:90353 GeneTree:ENSGT00390000001041
HOVERGEN:HBG100428 OrthoDB:EOG4SBF02 EMBL:BC044158 EMBL:BC155784
EMBL:BC154793 IPI:IPI00486545 RefSeq:NP_956424.1 UniGene:Dr.80579
ProteinModelPortal:Q803X1 STRING:Q803X1 Ensembl:ENSDART00000017850
GeneID:393098 KEGG:dre:393098 InParanoid:Q803X1 NextBio:20814172
Bgee:Q803X1 Uniprot:Q803X1
Length = 343
Score = 112 (44.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 39/137 (28%), Positives = 59/137 (43%)
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGD--IITLRPLRDFS 298
A LN KI T D+A ++ N+ G A + S GD I +PL+
Sbjct: 155 AMMLNVDKICTGHNADDVAETVLMNVLRGDIARLRRCTAISTSSEGDGAIPRCKPLKYAY 214
Query: 299 SKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKL 358
KE++ Y F L S + P A + A +F+ DL++ PS + V + + L
Sbjct: 215 EKEIVLYAYFKKLDYF---STECIYSPNA-YRGHARAFLKDLESVRPSAIIDVIHSGETL 270
Query: 359 SL-DLTSMNVNNTCLLC 374
S+ + M V TC C
Sbjct: 271 SVKEGVKMPVQGTCSRC 287
Score = 49 (22.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 14/68 (20%), Positives = 25/68 (36%)
Query: 64 CPRCNTNNGEVVLRLKDIY--CKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSS 121
C C V+ R K + CK C + + + + + V + SG S
Sbjct: 5 CSNCEQKRA-VLKRPKTGHSLCKDCFFWAFEEEIHQTITSAGLFNRGETVAIGASGGKDS 63
Query: 122 MALLHLLQ 129
L H+++
Sbjct: 64 TVLAHVMK 71
>UNIPROTKB|B4KLL0 [details] [associations]
symbol:GI19452 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7230 "Drosophila mojavensis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 EMBL:CH933808 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 KO:K14168 OrthoDB:EOG4C867X GO:GO:0034227
InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 RefSeq:XP_002004711.1 ProteinModelPortal:B4KLL0
EnsemblMetazoa:FBtr0170177 GeneID:6578808 KEGG:dmo:Dmoj_GI19452
FlyBase:FBgn0142190 InParanoid:B4KLL0 Uniprot:B4KLL0
Length = 343
Score = 87 (35.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 37/139 (26%), Positives = 59/139 (42%)
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG----DIITLRPLRD 296
AK L I T D+A ++ NI G A + +D RTG I ++PL+
Sbjct: 155 AKLLGVDSIATGHNADDIAETVLMNILRGDTARLRR---CTDIRTGGGEDSIPRVKPLKY 211
Query: 297 FSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
KE++ Y + L V+ + A P A + A +F+ DL+ PS + + + +
Sbjct: 212 SYEKEIVMYAHYKKL--VYFSTECVFA-PNA-YRGHARAFLKDLEKVRPSVIMDIIYSGE 267
Query: 357 KLSL-DLTSMNVNNTCLLC 374
+L D V C C
Sbjct: 268 QLRFKDTVKKPVRGNCERC 286
Score = 76 (31.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 21/73 (28%), Positives = 31/73 (42%)
Query: 80 DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR 139
D CK C + + SK+ R +KV VA SG S L H+L+ L+
Sbjct: 22 DALCKDCFFAAFEAEIHHTITTSKLFRRGEKVAVAASGGKDSTVLAHVLK---LLNERHN 78
Query: 140 ILFSVCAIYIDDG 152
+ + ID+G
Sbjct: 79 YGLDLVLLSIDEG 91
>UNIPROTKB|B4P3W7 [details] [associations]
symbol:GE22576 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7245 "Drosophila yakuba" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
EMBL:CM000157 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 KO:K14168 OrthoDB:EOG4C867X
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 RefSeq:XP_002089738.1 ProteinModelPortal:B4P3W7
STRING:B4P3W7 EnsemblMetazoa:FBtr0269094 GeneID:6528703
KEGG:dya:Dyak_GE22576 FlyBase:FBgn0239795 Uniprot:B4P3W7
Length = 343
Score = 87 (35.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 33/136 (24%), Positives = 56/136 (41%)
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT-LRPLRDFSS 299
AK L I T D+A ++ N+ G A + D I ++PL+
Sbjct: 155 AKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRRCTSIRTGGGEDTIPRVKPLKYSYE 214
Query: 300 KEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
KE++ Y + L V+ + A P A + A +F+ DL+ PS + + + ++L
Sbjct: 215 KEIVMYAHYKKL--VYFSTECVFA-PNA-YRGHARAFLKDLEKVRPSVIMDIIYSGEQLR 270
Query: 360 L-DLTSMNVNNTCLLC 374
D TC+ C
Sbjct: 271 FKDTVKKPERGTCIRC 286
Score = 76 (31.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 71 NGEVVLRLK--DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLL 128
N V+ R K D CK C + + S + R +KV VA SG S L H+L
Sbjct: 11 NRAVLKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRLGEKVAVAASGGKDSTVLAHVL 70
Query: 129 QEGMQLSSHKRILFSVCAIYIDDG 152
+ L+ + + ID+G
Sbjct: 71 K---LLNERHNYGLELVLLSIDEG 91
>UNIPROTKB|B3MI77 [details] [associations]
symbol:GF12710 "Cytoplasmic tRNA 2-thiolation protein 1"
species:7217 "Drosophila ananassae" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0002098 "tRNA wobble uridine modification"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034227 "tRNA
thio-modification" evidence=ISS] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 GO:GO:0005829 GO:GO:0005524 GO:GO:0016740
GO:GO:0000049 EMBL:CH902619 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 KO:K14168 OrthoDB:EOG4C867X
GO:GO:0034227 InterPro:IPR011063 TIGRFAMs:TIGR00269 PROSITE:PS01263
InterPro:IPR020554 RefSeq:XP_001959100.1 ProteinModelPortal:B3MI77
STRING:B3MI77 EnsemblMetazoa:FBtr0117410 GeneID:6495557
KEGG:dan:Dana_GF12710 FlyBase:FBgn0089744 InParanoid:B3MI77
Uniprot:B3MI77
Length = 343
Score = 85 (35.0 bits), Expect = 0.00070, Sum P(2) = 0.00069
Identities = 36/139 (25%), Positives = 59/139 (42%)
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTG----DIITLRPLRD 296
AK L I T D+A ++ NI G A + +D +TG I ++PL+
Sbjct: 155 AKLLGVDSIATGHNADDIAETVLMNILRGDTARLRR---CTDIKTGGGEDSIPRVKPLKY 211
Query: 297 FSSKEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTAD 356
KE++ Y + L V+ + A P A + A +F+ DL+ PS + + + +
Sbjct: 212 SYEKEIVMYAHYKKL--VYFSTECVFA-PNA-YRGHARAFLKDLEKVRPSVIMDIIYSGE 267
Query: 357 KLSL-DLTSMNVNNTCLLC 374
+L D V C C
Sbjct: 268 QLRFKDTVKKPVRGICTRC 286
Score = 75 (31.5 bits), Expect = 0.00070, Sum P(2) = 0.00069
Identities = 21/66 (31%), Positives = 28/66 (42%)
Query: 66 RCNTNNGEVVLRLK--DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMA 123
RC N + R K D CK C + + S + R +KV VA SG S
Sbjct: 8 RCG--NRAALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTV 65
Query: 124 LLHLLQ 129
L H+L+
Sbjct: 66 LAHVLK 71
>FB|FBgn0033375 [details] [associations]
symbol:CG8078 species:7227 "Drosophila melanogaster"
[GO:0000049 "tRNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0034227
"tRNA thio-modification" evidence=IEA] UniPathway:UPA00988
InterPro:IPR000541 InterPro:IPR012089 PIRSF:PIRSF004976
Pfam:PF01171 EMBL:AE013599 GO:GO:0005829 GO:GO:0005524
GO:GO:0016740 GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0002098 eggNOG:COG0037 KO:K14168 OMA:YEELYGW
OrthoDB:EOG4C867X GO:GO:0034227 InterPro:IPR011063
TIGRFAMs:TIGR00269 PROSITE:PS01263 InterPro:IPR020554
GeneTree:ENSGT00390000001041 EMBL:AY102671 RefSeq:NP_610451.1
UniGene:Dm.13362 ProteinModelPortal:Q7JWW5 SMR:Q7JWW5 IntAct:Q7JWW5
STRING:Q7JWW5 PaxDb:Q7JWW5 PRIDE:Q7JWW5 EnsemblMetazoa:FBtr0088631
GeneID:35920 KEGG:dme:Dmel_CG8078 UCSC:CG8078-RA
FlyBase:FBgn0033375 InParanoid:Q7JWW5 PhylomeDB:Q7JWW5
GenomeRNAi:35920 NextBio:795830 Bgee:Q7JWW5 Uniprot:Q7JWW5
Length = 343
Score = 84 (34.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 33/136 (24%), Positives = 55/136 (40%)
Query: 241 AKKLNCTKIFTAETQTDLATKIIANISLGKGAHVPLDVGFSDDRTGDIIT-LRPLRDFSS 299
AK L I T D+A ++ N+ G A + D I ++PL+
Sbjct: 155 AKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRRCTSIRTGGGEDTIPRVKPLKYSYE 214
Query: 300 KEVIYYNIFNDLSPVHVPSLATLADPLASLQKAAESFVTDLQTNFPSTVSTVFRTADKLS 359
KE++ Y + L V+ + A P A + A +F+ DL+ PS + + + ++L
Sbjct: 215 KEIVMYAHYKKL--VYFSTECVFA-PNA-YRGHARAFLKDLEKVRPSVIMDIIYSGEQLR 270
Query: 360 L-DLTSMNVNNTCLLC 374
D TC C
Sbjct: 271 FKDTVKKPERGTCTRC 286
Score = 75 (31.5 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 20/73 (27%), Positives = 30/73 (41%)
Query: 80 DIYCKACLLQYLNHKFRAALGKSKMMRPQDKVLVAFSGSHSSMALLHLLQEGMQLSSHKR 139
D CK C + + S + R +KV VA SG S L H+L+ L+
Sbjct: 22 DALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTVLAHVLK---LLNERHN 78
Query: 140 ILFSVCAIYIDDG 152
+ + ID+G
Sbjct: 79 YGLELVLLSIDEG 91
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 521 507 0.00086 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 64
No. of states in DFA: 614 (65 KB)
Total size of DFA: 268 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 43.76u 0.09s 43.85t Elapsed: 00:00:08
Total cpu time: 43.78u 0.09s 43.87t Elapsed: 00:00:09
Start: Thu Aug 15 14:23:10 2013 End: Thu Aug 15 14:23:19 2013