Your job contains 1 sequence.
>psy3869
MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF
LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCFKIIIFKKDCKLTIELLDTES
SDNEGEDNDNDNDEDKDDNEHDPDQSTQDSEKWSPYEEEPFPERNTAPANEETLVEPKVE
SEPPEQSTTDSQETDQDQDVPEQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3869
(203 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0022764 - symbol:Sin3A "Sin3A" species:7227 "Droso... 357 5.2e-31 1
UNIPROTKB|E1BX21 - symbol:SIN3A "Uncharacterized protein"... 318 4.1e-29 2
UNIPROTKB|Q96ST3 - symbol:SIN3A "Paired amphipathic helix... 315 8.6e-29 2
MGI|MGI:107157 - symbol:Sin3a "transcriptional regulator,... 310 2.3e-28 2
UNIPROTKB|F1SJ69 - symbol:SIN3A "Uncharacterized protein"... 312 2.6e-28 2
UNIPROTKB|F1MTR3 - symbol:SIN3A "Uncharacterized protein"... 312 2.9e-28 2
UNIPROTKB|J9P8L1 - symbol:SIN3A "Uncharacterized protein"... 312 2.9e-28 2
RGD|1311598 - symbol:Sin3a "SIN3 transcription regulator ... 309 2.0e-27 2
ZFIN|ZDB-GENE-030131-2066 - symbol:sin3ab "SIN3 homolog A... 303 8.5e-27 2
ZFIN|ZDB-GENE-070620-3 - symbol:sin3aa "SIN3 homolog A, t... 310 2.7e-26 1
ZFIN|ZDB-GENE-030131-8264 - symbol:sin3b "SIN3 homolog B,... 302 1.7e-25 1
UNIPROTKB|F1NMJ8 - symbol:SIN3B "Uncharacterized protein"... 287 5.9e-24 1
UNIPROTKB|O75182 - symbol:SIN3B "Paired amphipathic helix... 275 1.3e-22 1
MGI|MGI:107158 - symbol:Sin3b "transcriptional regulator,... 271 3.1e-22 1
UNIPROTKB|J9NXS4 - symbol:SIN3B "Uncharacterized protein"... 270 4.1e-22 1
UNIPROTKB|F1S9U7 - symbol:SIN3B "Uncharacterized protein"... 270 4.2e-22 1
UNIPROTKB|E1BGW5 - symbol:LOC520505 "Uncharacterized prot... 270 4.2e-22 1
UNIPROTKB|F1PN34 - symbol:SIN3B "Uncharacterized protein"... 270 4.3e-22 1
UNIPROTKB|F1PH07 - symbol:SIN3A "Uncharacterized protein"... 158 3.0e-10 1
DICTYBASE|DDB_G0281045 - symbol:DDB_G0281045 "paired amph... 140 5.6e-08 1
TAIR|locus:2012838 - symbol:AT1G10250 "AT1G10250" species... 123 6.8e-08 1
TAIR|locus:2100277 - symbol:SNL1 "AT3G01320" species:3702... 124 1.9e-06 1
POMBASE|SPBC12C2.10c - symbol:pst1 "Clr6 histone deacetyl... 116 1.5e-05 1
TAIR|locus:2147845 - symbol:SNL2 "AT5G15020" species:3702... 110 0.00012 1
>FB|FBgn0022764 [details] [associations]
symbol:Sin3A "Sin3A" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;IDA;NAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEP;IMP;TAS] [GO:0007422 "peripheral
nervous system development" evidence=TAS] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0003712 "transcription cofactor activity"
evidence=NAS] [GO:0016580 "Sin3 complex" evidence=NAS] [GO:0000791
"euchromatin" evidence=TAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0048666 "neuron development" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0017053 "transcriptional
repressor complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0035206 "regulation of hemocyte proliferation"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
EMBL:AE013599 GO:GO:0007346 GO:GO:0017053 GO:GO:0045892
GO:GO:0007422 GO:GO:0048813 GO:GO:0007517 GO:GO:0005700
GO:GO:0035206 GO:GO:0016580 GO:GO:0000791 Gene3D:1.20.1160.11
SUPFAM:SSF47762 KO:K11644 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 CTD:25942 ChiTaRS:SIN3A GeneTree:ENSGT00390000007239
UniGene:Dm.4374 GeneID:36382 KEGG:dme:Dmel_CG8815
FlyBase:FBgn0022764 GenomeRNAi:36382 NextBio:798235 EMBL:BT016112
RefSeq:NP_001188912.1 RefSeq:NP_725187.1 RefSeq:NP_725188.1
SMR:Q5U0Y0 IntAct:Q5U0Y0 STRING:Q5U0Y0 EnsemblMetazoa:FBtr0087887
EnsemblMetazoa:FBtr0087890 EnsemblMetazoa:FBtr0303565
UCSC:CG8815-RB InParanoid:Q5U0Y0 Uniprot:Q5U0Y0
Length = 2062
Score = 357 (130.7 bits), Expect = 5.2e-31, P = 5.2e-31
Identities = 63/116 (54%), Positives = 86/116 (74%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
M+KNVLDGNM+SN++EDT+RE+FGI+AYI+FTLDK+VSNAVRQLQ+ V++ ++C E F
Sbjct: 1567 MLKNVLDGNMDSNTFEDTMREMFGIYAYISFTLDKVVSNAVRQLQYCVTERAALDCVELF 1626
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXDCKLTIELL 116
E ++G TGG C AH+ E YQ+K+E + +ENC DC++TIELL
Sbjct: 1627 ATEQRRGCTGGFCRDAHKTFDREMSYQRKAESILNEENCFKVYIYKIDCRVTIELL 1682
>UNIPROTKB|E1BX21 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001106 "RNA polymerase II transcription corepressor
activity" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0034613
"cellular protein localization" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0051329
"interphase of mitotic cell cycle" evidence=IEA] [GO:0051595
"response to methylglyoxal" evidence=IEA] [GO:0071333 "cellular
response to glucose stimulus" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0017053
GO:GO:0043066 GO:GO:0000776 GO:GO:0034613 GO:GO:0071333
GO:GO:0003677 GO:GO:0006260 GO:GO:0003700 GO:GO:0003682
GO:GO:0005667 GO:GO:0051595 GO:GO:0001106 GO:GO:0016580
Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0051329
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 OMA:PNQNGCQ
GeneTree:ENSGT00390000007239 EMBL:AADN02074787 EMBL:AADN02074788
EMBL:AADN02074789 IPI:IPI00598520 Ensembl:ENSGALT00000002511
Uniprot:E1BX21
Length = 1269
Score = 318 (117.0 bits), Expect = 4.1e-29, Sum P(2) = 4.1e-29
Identities = 62/118 (52%), Positives = 84/118 (71%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+N+LDGNM+S+ YED+LRE+F IHAYIAFT+DK++ + VRQLQH+VSDE C++ + +
Sbjct: 961 MVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLY 1020
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXX--DCKLTIELL 116
L E+ GATGGL + R LE YQ+K+E M++ENC +LTIELL
Sbjct: 1021 LSENNNGATGGLLASQSSRNLLEATYQRKAEQLMSEENCFKLMFIQSRGQVQLTIELL 1078
Score = 47 (21.6 bits), Expect = 4.1e-29, Sum P(2) = 4.1e-29
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 149 DSEKWSPYEEEPFPERNTAPANEETLVEPKV 179
++E+WS Y E +T+P E L + V
Sbjct: 1090 EAERWSDYVERYVNSDSTSPELREHLAQKPV 1120
>UNIPROTKB|Q96ST3 [details] [associations]
symbol:SIN3A "Paired amphipathic helix protein Sin3a"
species:9606 "Homo sapiens" [GO:0007568 "aging" evidence=IEA]
[GO:0010243 "response to organic nitrogen" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0034613
"cellular protein localization" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0051329 "interphase
of mitotic cell cycle" evidence=IEA] [GO:0051595 "response to
methylglyoxal" evidence=IEA] [GO:0071333 "cellular response to
glucose stimulus" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=RCA] [GO:0016580
"Sin3 complex" evidence=NAS;IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0044255 "cellular lipid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0001102 "RNA polymerase
II activating transcription factor binding" evidence=IPI]
[GO:0033558 "protein deacetylase activity" evidence=IMP]
[GO:0006476 "protein deacetylation" evidence=IMP] [GO:1900181
"negative regulation of protein localization to nucleus"
evidence=IMP] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IMP] [GO:1901675 "negative
regulation of histone H3-K27 acetylation" evidence=IMP] [GO:0031937
"positive regulation of chromatin silencing" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0002230 "positive
regulation of defense response to virus by host" evidence=IMP]
[GO:0002218 "activation of innate immune response" evidence=IMP]
Reactome:REACT_604 Reactome:REACT_111217 InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 GO:GO:0017053
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0005730 GO:GO:0000776 GO:GO:0034613 GO:GO:0044281
GO:GO:0071333 GO:GO:0003677 GO:GO:0007596 GO:GO:0006260
GO:GO:0007568 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0044255 GO:GO:0003682 GO:GO:0002230 GO:GO:0005667
GO:GO:0000122 GO:GO:0010243 GO:GO:0002218
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0051595
GO:GO:0001106 GO:GO:0043619 GO:GO:0016580 GO:GO:0031937
GO:GO:2000678 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0033558
PDB:1PO4 PDBsum:1PO4 GO:GO:0051329 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 EMBL:AF418569
EMBL:BC018973 EMBL:BC137098 EMBL:BC137099 EMBL:AK027559
EMBL:AK074903 EMBL:AK096477 EMBL:AY044430 EMBL:AL117513
IPI:IPI00170596 PIR:T17282 RefSeq:NP_001138829.1
RefSeq:NP_001138830.1 RefSeq:NP_056292.1 UniGene:Hs.513039
ProteinModelPortal:Q96ST3 SMR:Q96ST3 IntAct:Q96ST3
MINT:MINT-2815493 STRING:Q96ST3 PhosphoSite:Q96ST3 DMDM:37999759
PaxDb:Q96ST3 PeptideAtlas:Q96ST3 PRIDE:Q96ST3
Ensembl:ENST00000360439 Ensembl:ENST00000394947
Ensembl:ENST00000394949 GeneID:25942 KEGG:hsa:25942 UCSC:uc002bai.3
CTD:25942 GeneCards:GC15M075661 H-InvDB:HIX0012443
H-InvDB:HIX0019634 H-InvDB:HIX0172841 HGNC:HGNC:19353 HPA:CAB004506
MIM:607776 neXtProt:NX_Q96ST3 PharmGKB:PA134993567
HOVERGEN:HBG060425 InParanoid:Q96ST3 OMA:PNQNGCQ OrthoDB:EOG48KR9G
PhylomeDB:Q96ST3 ChiTaRS:SIN3A GenomeRNAi:25942 NextBio:47516
Bgee:Q96ST3 CleanEx:HS_SIN3A Genevestigator:Q96ST3
GermOnline:ENSG00000169375 GO:GO:1901675 GO:GO:1900181
Uniprot:Q96ST3
Length = 1273
Score = 315 (115.9 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 61/118 (51%), Positives = 84/118 (71%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++LDGN++S+ YED+LRE+F IHAYIAFT+DK++ + VRQLQH+VSDE C++ + +
Sbjct: 965 MVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLY 1024
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXD--CKLTIELL 116
L E+ GATGG T + R LE YQ+K+E M+DENC +LTIELL
Sbjct: 1025 LAENNNGATGGQLNTQNSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELL 1082
Score = 47 (21.6 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 149 DSEKWSPYEEEPFPERNTAPANEETLVEPKV 179
++E+WS Y E T+P E L + V
Sbjct: 1094 EAERWSDYVERYMNSDTTSPELREHLAQKPV 1124
>MGI|MGI:107157 [details] [associations]
symbol:Sin3a "transcriptional regulator, SIN3A (yeast)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IGI]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000785 "chromatin"
evidence=ISO] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IGI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0002218 "activation of innate immune
response" evidence=ISO] [GO:0002230 "positive regulation of defense
response to virus by host" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0006260 "DNA replication"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007568 "aging" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0010243 "response
to organic nitrogen" evidence=ISO] [GO:0010971 "positive regulation
of G2/M transition of mitotic cell cycle" evidence=IMP] [GO:0016580
"Sin3 complex" evidence=ISO] [GO:0017053 "transcriptional repressor
complex" evidence=IDA;IPI] [GO:0031937 "positive regulation of
chromatin silencing" evidence=ISO] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051595 "response to
methylglyoxal" evidence=IDA] [GO:0071333 "cellular response to
glucose stimulus" evidence=IDA] [GO:1900181 "negative regulation of
protein localization to nucleus" evidence=ISO] [GO:1901675
"negative regulation of histone H3-K27 acetylation" evidence=ISO]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=ISO] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 MGI:MGI:107157 GO:GO:0017053 GO:GO:0043066
GO:GO:0005730 GO:GO:0000776 GO:GO:0034613 GO:GO:0071333
GO:GO:0003677 GO:GO:0006260 GO:GO:0007568 GO:GO:0001701
GO:GO:0003700 GO:GO:0003682 GO:GO:0005667 GO:GO:0010243
GO:GO:0051595 GO:GO:0001106 GO:GO:0043619 GO:GO:0016580
Gene3D:1.20.1160.11 SUPFAM:SSF47762 PDB:1S5R PDBsum:1S5R
GO:GO:0051329 PDB:1G1E PDB:1S5Q PDBsum:1G1E PDBsum:1S5Q PDB:2L9S
PDBsum:2L9S eggNOG:COG5602 KO:K11644 InterPro:IPR013194
Pfam:PF08295 SMART:SM00761 PDB:2RMS PDBsum:2RMS PDB:2LD7
PDBsum:2LD7 CTD:25942 HOVERGEN:HBG060425 OMA:PNQNGCQ
OrthoDB:EOG48KR9G EMBL:L36831 EMBL:U22394 EMBL:AK220292
EMBL:BC052716 EMBL:BC053385 EMBL:L38620 EMBL:L38621 IPI:IPI00276051
IPI:IPI00985713 PIR:A56068 PIR:I61713 RefSeq:NP_001103820.1
RefSeq:NP_001103821.1 RefSeq:NP_035508.2 UniGene:Mm.15755 PDB:2RMR
PDBsum:2RMR ProteinModelPortal:Q60520 SMR:Q60520 DIP:DIP-469N
IntAct:Q60520 MINT:MINT-1510506 STRING:Q60520 PhosphoSite:Q60520
PaxDb:Q60520 PRIDE:Q60520 Ensembl:ENSMUST00000049169
Ensembl:ENSMUST00000167715 Ensembl:ENSMUST00000168177
Ensembl:ENSMUST00000168502 Ensembl:ENSMUST00000168678 GeneID:20466
KEGG:mmu:20466 UCSC:uc009ptx.2 UCSC:uc012gtw.1
GeneTree:ENSGT00390000007239 InParanoid:Q570Z7
EvolutionaryTrace:Q60520 NextBio:298567 Bgee:Q60520
CleanEx:MM_SIN3A Genevestigator:Q60520
GermOnline:ENSMUSG00000042557 Uniprot:Q60520
Length = 1274
Score = 310 (114.2 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 59/118 (50%), Positives = 83/118 (70%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++LDGN++S+ YED+LRE+F IHAYIAFT+DK++ + VRQLQH+VSDE C++ + +
Sbjct: 966 MVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEVCVQVTDLY 1025
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXD--CKLTIELL 116
L E+ GATGG + R LE YQ+K+E M+DENC +LT+ELL
Sbjct: 1026 LAENNNGATGGQLNSQTSRSLLESAYQRKAEQLMSDENCFKLMFIQSQGQVQLTVELL 1083
Score = 48 (22.0 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 149 DSEKWSPYEEEPFPERNTAPANEETLVEPKV 179
++E+WS Y E T+P E L + V
Sbjct: 1095 EAERWSDYVERYMSSDTTSPELREHLAQKPV 1125
>UNIPROTKB|F1SJ69 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0051595 "response to methylglyoxal" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0017053 GO:GO:0043066 GO:GO:0000776
GO:GO:0034613 GO:GO:0071333 GO:GO:0003677 GO:GO:0006260
GO:GO:0001701 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0051595 GO:GO:0001106 GO:GO:0016580 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0051329 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 OMA:PNQNGCQ GeneTree:ENSGT00390000007239
EMBL:CU467588 Ensembl:ENSSSCT00000002105 Uniprot:F1SJ69
Length = 1227
Score = 312 (114.9 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 61/118 (51%), Positives = 83/118 (70%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++LDGN++S+ YED+LRE+F IHAYIAFT+DK++ + VRQLQH+VSDE C++ + +
Sbjct: 919 MVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLY 978
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXD--CKLTIELL 116
L E+ GATGG T R LE YQ+K+E M+DENC +LTIELL
Sbjct: 979 LAENNNGATGGQLNTQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELL 1036
Score = 45 (20.9 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 149 DSEKWSPYEEEPFPERNTAPANEETLVEPKV 179
++E+WS Y E T+P E L V
Sbjct: 1048 EAERWSDYVERYMNSDTTSPELREHLARKPV 1078
>UNIPROTKB|F1MTR3 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0051595 "response to methylglyoxal" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0017053 GO:GO:0043066 GO:GO:0000776
GO:GO:0034613 GO:GO:0071333 GO:GO:0003677 GO:GO:0006260
GO:GO:0001701 GO:GO:0003700 GO:GO:0003682 GO:GO:0005667
GO:GO:0051595 GO:GO:0001106 GO:GO:0016580 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0051329 KO:K11644 InterPro:IPR013194
Pfam:PF08295 SMART:SM00761 CTD:25942 OMA:PNQNGCQ
GeneTree:ENSGT00390000007239 EMBL:DAAA02052491 IPI:IPI01028188
RefSeq:XP_002696677.1 RefSeq:XP_003583795.1 RefSeq:XP_003587608.1
RefSeq:XP_880544.4 Ensembl:ENSBTAT00000013167 GeneID:518504
KEGG:bta:518504 NextBio:20872670 Uniprot:F1MTR3
Length = 1274
Score = 312 (114.9 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 61/118 (51%), Positives = 83/118 (70%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++LDGN++S+ YED+LRE+F IHAYIAFT+DK++ + VRQLQH+VSDE C++ + +
Sbjct: 966 MVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLY 1025
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXD--CKLTIELL 116
L E+ GATGG T R LE YQ+K+E M+DENC +LTIELL
Sbjct: 1026 LAENNNGATGGQLNTQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELL 1083
Score = 45 (20.9 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 149 DSEKWSPYEEEPFPERNTAPANEETLVEPKV 179
++E+WS Y E T+P E L V
Sbjct: 1095 EAERWSDYVERYMNSDTTSPELREHLARKPV 1125
>UNIPROTKB|J9P8L1 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 CTD:25942 OMA:PNQNGCQ
GeneTree:ENSGT00390000007239 EMBL:AAEX03016328 EMBL:AAEX03016329
RefSeq:XP_535546.4 Ensembl:ENSCAFT00000045591 GeneID:478372
KEGG:cfa:478372 Uniprot:J9P8L1
Length = 1274
Score = 312 (114.9 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 61/118 (51%), Positives = 83/118 (70%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++LDGN++S+ YED+LRE+F IHAYIAFT+DK++ + VRQLQH+VSDE C++ + +
Sbjct: 966 MVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLY 1025
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXD--CKLTIELL 116
L E+ GATGG T R LE YQ+K+E M+DENC +LTIELL
Sbjct: 1026 LAENNNGATGGQLNTQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELL 1083
Score = 45 (20.9 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 149 DSEKWSPYEEEPFPERNTAPANEETLVEPKV 179
++E+WS Y E T+P E L V
Sbjct: 1095 EAERWSDYVERYMNSDTTSPELREHLARKPV 1125
>RGD|1311598 [details] [associations]
symbol:Sin3a "SIN3 transcription regulator homolog A (yeast)"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=IEA;ISO] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA;ISO] [GO:0001701 "in utero
embryonic development" evidence=IEA;ISO] [GO:0002218 "activation of
innate immune response" evidence=ISO] [GO:0002230 "positive
regulation of defense response to virus by host" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007568 "aging" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0010243 "response to organic nitrogen"
evidence=IDA] [GO:0016580 "Sin3 complex" evidence=IEA;ISO]
[GO:0017053 "transcriptional repressor complex" evidence=IEA;ISO]
[GO:0031937 "positive regulation of chromatin silencing"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034613 "cellular protein localization" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IDA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051329 "interphase of
mitotic cell cycle" evidence=IEA;ISO] [GO:0051595 "response to
methylglyoxal" evidence=IEA;ISO] [GO:0071333 "cellular response to
glucose stimulus" evidence=IEA;ISO] [GO:1900181 "negative
regulation of protein localization to nucleus" evidence=ISO]
[GO:1901675 "negative regulation of histone H3-K27 acetylation"
evidence=ISO] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=ISO] InterPro:IPR003822
Pfam:PF02671 PROSITE:PS51477 RGD:1311598 GO:GO:0017053
GO:GO:0043066 GO:GO:0043234 GO:GO:0000776 GO:GO:0034613
GO:GO:0032403 GO:GO:0071333 GO:GO:0003677 GO:GO:0006260
GO:GO:0007568 GO:GO:0001701 GO:GO:0000785 GO:GO:0003700
GO:GO:0003682 GO:GO:0005667 GO:GO:0010243 GO:GO:0051595
GO:GO:0001106 GO:GO:0043619 GO:GO:0016580 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0051329 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 OrthoDB:EOG48KR9G IPI:IPI00190130
Ensembl:ENSRNOT00000041686 UCSC:RGD:1311598 ArrayExpress:D3ZIN2
Uniprot:D3ZIN2
Length = 1282
Score = 309 (113.8 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 60/118 (50%), Positives = 83/118 (70%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++LDGN++S+ YED+LRE+F IHAYIAFT+DK++ + VRQLQH+VSDE C++ + +
Sbjct: 966 MVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEVCVQVTDLY 1025
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXD--CKLTIELL 116
L E+ GATGG + R LE YQ+K+E M+DENC +LTIELL
Sbjct: 1026 LAENNNGATGGQLSSQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTIELL 1083
Score = 40 (19.1 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 152 KWSPYEEEPFPERNTAPANEETLVEPKV 179
+WS Y E T+P E L + V
Sbjct: 1106 RWSDYVERYMSSDTTSPELREHLAQKPV 1133
>ZFIN|ZDB-GENE-030131-2066 [details] [associations]
symbol:sin3ab "SIN3 homolog A, transcription
regulator (yeast) b" species:7955 "Danio rerio" [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 ZFIN:ZDB-GENE-030131-2066 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 EMBL:BX663612 IPI:IPI00802882
Ensembl:ENSDART00000083555 Uniprot:E7F0R9
Length = 1264
Score = 303 (111.7 bits), Expect = 8.5e-27, Sum P(2) = 8.5e-27
Identities = 59/118 (50%), Positives = 79/118 (66%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+N+LDGNME++ YED LRE+F IHAYIAFT+DK++ + VRQLQH+VSD+ C++ + +
Sbjct: 959 MVRNLLDGNMETSQYEDQLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDDICVQVTDLY 1018
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXD--CKLTIELL 116
L E ATGG T R + E YQ+KSE M+DENC +L +ELL
Sbjct: 1019 LSECANKATGGSLSTQSSRSNAETSYQRKSEQLMSDENCFKLLFQKSKGTVQLAVELL 1076
Score = 40 (19.1 bits), Expect = 8.5e-27, Sum P(2) = 8.5e-27
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 149 DSEKWSPYEEEPFPERNTAPANEETLVEPKV 179
D+E+W Y E + +P E L + V
Sbjct: 1088 DTERWPDYVERYLNTSSASPELREHLSQKPV 1118
>ZFIN|ZDB-GENE-070620-3 [details] [associations]
symbol:sin3aa "SIN3 homolog A, transcription
regulator (yeast) a" species:7955 "Danio rerio" [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
ZFIN:ZDB-GENE-070620-3 GO:GO:0005634 GO:GO:0006355
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 HOVERGEN:HBG060425
OMA:PNQNGCQ OrthoDB:EOG48KR9G GeneTree:ENSGT00390000007239
HOGENOM:HOG000230688 EMBL:CU207224 EMBL:BC139856 IPI:IPI00484779
RefSeq:NP_001091650.1 UniGene:Dr.79679 SMR:A5D6S0 STRING:A5D6S0
Ensembl:ENSDART00000083539 GeneID:563090 KEGG:dre:563090 CTD:563090
NextBio:20884735 Uniprot:A5D6S0
Length = 1276
Score = 310 (114.2 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 60/118 (50%), Positives = 81/118 (68%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+N+LDGNME++ YED+LRE+F IHAYIAFT+DK++ N RQLQH+VS+E C++ E +
Sbjct: 972 MVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQNIARQLQHIVSEEICVQVTELY 1031
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXX--DCKLTIELL 116
L ES +TGG T R E YQ+K+E M+DENC + +LT+ELL
Sbjct: 1032 LVESGHSSTGGSLLTQSSRAQAEASYQRKAEQLMSDENCFKLMFLKSRGNVQLTVELL 1089
>ZFIN|ZDB-GENE-030131-8264 [details] [associations]
symbol:sin3b "SIN3 homolog B, transcription
regulator (yeast)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 ZFIN:ZDB-GENE-030131-8264 GO:GO:0005634
GO:GO:0006355 EMBL:BX004884 Gene3D:1.20.1160.11 SUPFAM:SSF47762
eggNOG:COG5602 InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
HOVERGEN:HBG060425 GeneTree:ENSGT00390000007239 CTD:23309
HOGENOM:HOG000230688 OMA:DVYSLFF OrthoDB:EOG4ZGPBH EMBL:BC171496
EMBL:BC171498 IPI:IPI00501556 RefSeq:NP_001038410.1
UniGene:Dr.74013 SMR:Q1LYM8 STRING:Q1LYM8
Ensembl:ENSDART00000090371 GeneID:560837 KEGG:dre:560837
InParanoid:Q1LYM8 NextBio:20883638 Uniprot:Q1LYM8
Length = 1196
Score = 302 (111.4 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 62/118 (52%), Positives = 77/118 (65%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++LDGN+ES YEDTLRE+F IHAYI FT+DK++ N VRQLQHLVSDE C++ E +
Sbjct: 891 MVRSLLDGNLESTQYEDTLREMFTIHAYIGFTIDKLIQNIVRQLQHLVSDEVCLQVTELY 950
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXX--DCKLTIELL 116
L E K+GA GG + R E YQ K+E M +ENC LTIELL
Sbjct: 951 LAERKRGAAGGNLSSQCVRAAWEASYQWKAERVMAEENCFKVMFIQNKGQVTLTIELL 1008
>UNIPROTKB|F1NMJ8 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000805 "X chromosome" evidence=IEA] [GO:0000806 "Y
chromosome" evidence=IEA] [GO:0001741 "XY body" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0030849 "autosome" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0003682
GO:GO:0001741 GO:GO:0000805 GO:GO:0000806 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0030849 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 GeneTree:ENSGT00390000007239 OMA:DVYSLFF
EMBL:AADN02061989 EMBL:AADN02061988 EMBL:AADN02061985
EMBL:AADN02061986 EMBL:AADN02061983 EMBL:AADN02061984
EMBL:AADN02061987 EMBL:AADN02061990 EMBL:AADN02061991
IPI:IPI00600088 Ensembl:ENSGALT00000005982 Uniprot:F1NMJ8
Length = 1078
Score = 287 (106.1 bits), Expect = 5.9e-24, P = 5.9e-24
Identities = 59/118 (50%), Positives = 76/118 (64%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++LDGN++ YEDTLRE+F IHAYI FT+DK+V N VRQL HLVSD+ C++ E +
Sbjct: 771 MVRSLLDGNIDPTQYEDTLREMFTIHAYIGFTMDKLVQNIVRQLHHLVSDDICLKVVELY 830
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXDCK--LTIELL 116
L E K+GA GG + R E YQ K+E M DENC + +TIELL
Sbjct: 831 LNERKRGAAGGNLSSRCVRAAKETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELL 888
>UNIPROTKB|O75182 [details] [associations]
symbol:SIN3B "Paired amphipathic helix protein Sin3b"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000805 "X chromosome"
evidence=IEA] [GO:0000806 "Y chromosome" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007519
"skeletal muscle tissue development" evidence=IEA] [GO:0030849
"autosome" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048738 "cardiac
muscle tissue development" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005737
GO:GO:0003714 GO:GO:0045892
Pathway_Interaction_DB:telomerasepathway GO:GO:0005654
GO:GO:0044281 GO:GO:0044255 GO:GO:0006351 GO:GO:0003682
GO:GO:0048738 EMBL:CH471106
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001741
GO:GO:0007519 GO:GO:0000805 GO:GO:0000806 Gene3D:1.20.1160.11
SUPFAM:SSF47762 GO:GO:0030849 eggNOG:COG5602 InterPro:IPR013194
Pfam:PF08295 SMART:SM00761 HOVERGEN:HBG060425 EMBL:AY706204
EMBL:AB014600 EMBL:BC005113 EMBL:BC025026 EMBL:BC063531
EMBL:BC110821 IPI:IPI00464980 IPI:IPI00607589 IPI:IPI00607724
RefSeq:NP_056075.1 UniGene:Hs.13999 ProteinModelPortal:O75182
SMR:O75182 IntAct:O75182 STRING:O75182 PhosphoSite:O75182
PaxDb:O75182 PRIDE:O75182 DNASU:23309 Ensembl:ENST00000248054
Ensembl:ENST00000379803 GeneID:23309 KEGG:hsa:23309 UCSC:uc002new.3
UCSC:uc002ney.2 UCSC:uc002nez.2 CTD:23309 GeneCards:GC19P016940
HGNC:HGNC:19354 HPA:HPA050329 MIM:607777 neXtProt:NX_O75182
PharmGKB:PA134909030 HOGENOM:HOG000230688 InParanoid:O75182
OMA:DVYSLFF OrthoDB:EOG4ZGPBH GenomeRNAi:23309 NextBio:45174
Bgee:O75182 CleanEx:HS_SIN3B Genevestigator:O75182
GermOnline:ENSG00000127511 Uniprot:O75182
Length = 1162
Score = 275 (101.9 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 55/118 (46%), Positives = 75/118 (63%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++L+G+++ YEDTLRE+F IHAY+ FT+DK+V N RQL HLVSD+ C++ E +
Sbjct: 854 MVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQNIARQLHHLVSDDVCLKVVELY 913
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXDCK--LTIELL 116
L E K+GA GG + R E YQ K+E M DENC + +TIELL
Sbjct: 914 LNEKKRGAAGGNLSSRCVRAARETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELL 971
>MGI|MGI:107158 [details] [associations]
symbol:Sin3b "transcriptional regulator, SIN3B (yeast)"
species:10090 "Mus musculus" [GO:0000805 "X chromosome"
evidence=IDA] [GO:0000806 "Y chromosome" evidence=IDA] [GO:0001741
"XY body" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IDA] [GO:0030849 "autosome" evidence=IDA]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048738 "cardiac muscle tissue development"
evidence=IDA] InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477
MGI:MGI:107158 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0006351 GO:GO:0003682 GO:GO:0048738
GO:GO:0045786 GO:GO:0001741 GO:GO:0007519 GO:GO:0000805
GO:GO:0000806 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0030849
PDB:1E91 PDB:1PD7 PDBsum:1E91 PDBsum:1PD7 eggNOG:COG5602
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 PDB:2CZY PDBsum:2CZY
HOVERGEN:HBG060425 GeneTree:ENSGT00390000007239 CTD:23309
HOGENOM:HOG000230688 OMA:DVYSLFF OrthoDB:EOG4ZGPBH EMBL:L38622
EMBL:AF038848 EMBL:AK173005 EMBL:BC020049 EMBL:BC021160
IPI:IPI00121971 IPI:IPI00124066 IPI:IPI00338793 IPI:IPI00608092
PIR:I61714 RefSeq:NP_001106719.1 RefSeq:NP_033214.2 UniGene:Mm.2137
PDB:2CR7 PDB:2F05 PDBsum:2CR7 PDBsum:2F05 ProteinModelPortal:Q62141
SMR:Q62141 DIP:DIP-470N IntAct:Q62141 STRING:Q62141
PhosphoSite:Q62141 PaxDb:Q62141 PRIDE:Q62141
Ensembl:ENSMUST00000004494 Ensembl:ENSMUST00000109950 GeneID:20467
KEGG:mmu:20467 UCSC:uc009mgp.2 UCSC:uc009mgq.3 InParanoid:Q62141
EvolutionaryTrace:Q62141 NextBio:298571 Bgee:Q62141
CleanEx:MM_SIN3B Genevestigator:Q62141
GermOnline:ENSMUSG00000031622 Uniprot:Q62141
Length = 1098
Score = 271 (100.5 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 55/118 (46%), Positives = 75/118 (63%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++L+G+++ YEDTLRE+F IHAYI FT+DK+V N RQL HLVSD+ C++ E +
Sbjct: 791 MVRSLLEGSIDPTQYEDTLREMFTIHAYIGFTMDKLVQNIARQLHHLVSDDVCLKVVELY 850
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXDCK--LTIELL 116
L E ++GA GG + R E YQ K+E M DENC + +TIELL
Sbjct: 851 LNEQQRGAAGGNLSSRCVRAARETSYQWKAERCMADENCFKVMFLQRRGQVIMTIELL 908
>UNIPROTKB|J9NXS4 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 EMBL:AAEX03012305
Ensembl:ENSCAFT00000049746 Uniprot:J9NXS4
Length = 1127
Score = 270 (100.1 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 54/118 (45%), Positives = 75/118 (63%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++L+G+++ YEDTLRE+F IHAY+ FT+DK+V + RQL HLVSD+ C++ E +
Sbjct: 820 MVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQSIARQLHHLVSDDVCLKVVELY 879
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXDCK--LTIELL 116
L E K+GA GG + R E YQ K+E M DENC + +TIELL
Sbjct: 880 LNEKKRGAAGGNLSSRCVRAARETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELL 937
>UNIPROTKB|F1S9U7 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] [GO:0000806 "Y chromosome" evidence=IEA] [GO:0000805
"X chromosome" evidence=IEA] [GO:0048738 "cardiac muscle tissue
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030849 "autosome"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0003682
GO:GO:0048738 GO:GO:0001741 GO:GO:0007519 GO:GO:0000805
GO:GO:0000806 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0030849
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 OMA:DVYSLFF EMBL:CU915550
Ensembl:ENSSSCT00000015147 Uniprot:F1S9U7
Length = 1141
Score = 270 (100.1 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 54/118 (45%), Positives = 75/118 (63%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++L+G+++ YEDTLRE+F IHAY+ FT+DK+V + RQL HLVSD+ C++ E +
Sbjct: 834 MVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQSIARQLHHLVSDDVCLKVVELY 893
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXDCK--LTIELL 116
L E K+GA GG + R E YQ K+E M DENC + +TIELL
Sbjct: 894 LNEKKRGAAGGNLSSRCVRAARETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELL 951
>UNIPROTKB|E1BGW5 [details] [associations]
symbol:LOC520505 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0048738 "cardiac muscle tissue development"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030849 "autosome" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001741 "XY body" evidence=IEA] [GO:0000806 "Y chromosome"
evidence=IEA] [GO:0000805 "X chromosome" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0003682
GO:GO:0048738 GO:GO:0001741 GO:GO:0007519 GO:GO:0000805
GO:GO:0000806 Gene3D:1.20.1160.11 SUPFAM:SSF47762 GO:GO:0030849
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 OMA:DVYSLFF EMBL:DAAA02019084
IPI:IPI00690642 Ensembl:ENSBTAT00000036414 Uniprot:E1BGW5
Length = 1144
Score = 270 (100.1 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 54/118 (45%), Positives = 75/118 (63%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++L+G+++ YEDTLRE+F IHAY+ FT+DK+V + RQL HLVSD+ C++ E +
Sbjct: 837 MVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQSIARQLHHLVSDDVCLKVVELY 896
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXDCK--LTIELL 116
L E K+GA GG + R E YQ K+E M DENC + +TIELL
Sbjct: 897 LNEKKRGAAGGNLSSRCVRAARETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELL 954
>UNIPROTKB|F1PN34 [details] [associations]
symbol:SIN3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 OMA:DVYSLFF EMBL:AAEX03012305
Ensembl:ENSCAFT00000024754 Uniprot:F1PN34
Length = 1156
Score = 270 (100.1 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 54/118 (45%), Positives = 75/118 (63%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
MV+++L+G+++ YEDTLRE+F IHAY+ FT+DK+V + RQL HLVSD+ C++ E +
Sbjct: 849 MVRSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQSIARQLHHLVSDDVCLKVVELY 908
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXDCK--LTIELL 116
L E K+GA GG + R E YQ K+E M DENC + +TIELL
Sbjct: 909 LNEKKRGAAGGNLSSRCVRAARETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELL 966
>UNIPROTKB|F1PH07 [details] [associations]
symbol:SIN3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
GO:GO:0006355 Gene3D:1.20.1160.11 SUPFAM:SSF47762
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
GeneTree:ENSGT00390000007239 EMBL:AAEX03016328 EMBL:AAEX03016329
Ensembl:ENSCAFT00000028626 Uniprot:F1PH07
Length = 959
Score = 158 (60.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 27/45 (60%), Positives = 41/45 (91%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQ 45
MV+++LDGN++S+ YED+LRE+F IHAYIAFT+DK++ + VRQ++
Sbjct: 915 MVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQVR 959
>DICTYBASE|DDB_G0281045 [details] [associations]
symbol:DDB_G0281045 "paired amphipathic helix (PAH)
containing protein" species:44689 "Dictyostelium discoideum"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 dictyBase:DDB_G0281045 GO:GO:0005634 GO:GO:0006355
EMBL:AAFI02000040 InterPro:IPR011050 SUPFAM:SSF51126
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 RefSeq:XP_640783.1
ProteinModelPortal:Q54UJ3 SMR:Q54UJ3 EnsemblProtists:DDB0216409
GeneID:8622836 KEGG:ddi:DDB_G0281045 InParanoid:Q54UJ3
Uniprot:Q54UJ3
Length = 1934
Score = 140 (54.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 2 VKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETFL 61
++ +DG+ YED+ R GI +YI FTLDK+++ RQLQ L+ E C+ F
Sbjct: 1681 LQEFMDGDSNQEKYEDSCRSYLGISSYILFTLDKLINQLARQLQALLQGENCLRLLYLFT 1740
Query: 62 KESKKGATGGLCETAHQRV 80
E K TG E H +V
Sbjct: 1741 LEVKS-YTGWSDELYHSKV 1758
>TAIR|locus:2012838 [details] [associations]
symbol:AT1G10250 "AT1G10250" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC005489
IPI:IPI00520869 PIR:H86236 RefSeq:NP_172496.1 UniGene:At.51549
STRING:Q9SY67 EnsemblPlants:AT1G10250.1 GeneID:837564
KEGG:ath:AT1G10250 TAIR:At1g10250 InParanoid:Q9SY67
PhylomeDB:Q9SY67 ProtClustDB:CLSN2912708 Genevestigator:Q9SY67
Uniprot:Q9SY67
Length = 77
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 4 NVLDGNMESNS-YEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDET 52
N+LDG+++ N+ +ED R +FG +Y+ FTLDK+V V+ L + SDET
Sbjct: 6 NLLDGSIDDNTKFEDECRAIFGAQSYVLFTLDKLVQKFVKHLHAVASDET 55
>TAIR|locus:2100277 [details] [associations]
symbol:SNL1 "AT3G01320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0016926 "protein desumoylation" evidence=RCA]
[GO:0043481 "anthocyanin accumulation in tissues in response to UV
light" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003822 Pfam:PF02671 PROSITE:PS51477 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0006351
EMBL:AC010676 Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602
KO:K11644 InterPro:IPR013194 Pfam:PF08295 SMART:SM00761
IPI:IPI00521144 RefSeq:NP_186781.4 UniGene:At.41297 HSSP:Q62141
ProteinModelPortal:Q9SRH9 SMR:Q9SRH9 IntAct:Q9SRH9 STRING:Q9SRH9
PaxDb:Q9SRH9 PRIDE:Q9SRH9 EnsemblPlants:AT3G01320.1 GeneID:821265
KEGG:ath:AT3G01320 TAIR:At3g01320 HOGENOM:HOG000030343 OMA:SKPENSA
ProtClustDB:CLSN2681550 Genevestigator:Q9SRH9 Uniprot:Q9SRH9
Length = 1372
Score = 124 (48.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 5 VLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDET---CIECYETFL 61
+LDG+ E+ +ED R + G +Y+ FTLDK++ V+QLQ +V+DE ++ YE +
Sbjct: 1156 LLDGSAENTKFEDECRAIIGNQSYVLFTLDKLIYRLVKQLQAIVADEMDNKLLQLYE-YE 1214
Query: 62 KESKKGAT--GGLCETAHQRVHLEQGYQ 87
K K G E VH E Y+
Sbjct: 1215 KSRKPGRVIDSVYYENVRVLVHEENIYR 1242
>POMBASE|SPBC12C2.10c [details] [associations]
symbol:pst1 "Clr6 histone deacetylase complex subunit
Pst1" species:4896 "Schizosaccharomyces pombe" [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005721 "centromeric heterochromatin" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0016575 "histone
deacetylation" evidence=IGI] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698
"Rpd3L complex" evidence=IDA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 PomBase:SPBC12C2.10c GO:GO:0003714 GO:GO:0051301
EMBL:CU329671 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0005721 GO:GO:0030261
GO:GO:0033698 GO:GO:0016575 GO:GO:0032221 Gene3D:1.20.1160.11
SUPFAM:SSF47762 EMBL:AF280407 PIR:T39371 RefSeq:NP_596012.2
ProteinModelPortal:Q09750 SMR:Q09750 DIP:DIP-29340N IntAct:Q09750
STRING:Q09750 EnsemblFungi:SPBC12C2.10c.1 GeneID:2540018
KEGG:spo:SPBC12C2.10c eggNOG:COG5602 KO:K11644 OMA:NDEWASH
OrthoDB:EOG4X3M8D NextBio:20801161 InterPro:IPR013194 Pfam:PF08295
SMART:SM00761 Uniprot:Q09750
Length = 1522
Score = 116 (45.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 22/98 (22%), Positives = 53/98 (54%)
Query: 1 MVKNVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETF 60
+ + +++G ++ N +ED LR L+GIHA+ +T++K+V++ ++QL + ++ + + +
Sbjct: 1077 LCERLMEGEIDQNGFEDALRCLYGIHAFRLYTVEKLVTSIIKQLHSVTTNRRLAQVFMYY 1136
Query: 61 LKESKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDEN 98
K+ + T + + R+ E + + D N
Sbjct: 1137 EKDRVQRRTSPRQQIMY-RIQTETAFGPDENLCCIDWN 1173
>TAIR|locus:2147845 [details] [associations]
symbol:SNL2 "AT5G15020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0010048 "vernalization response"
evidence=RCA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=RCA] [GO:0048440 "carpel
development" evidence=RCA] InterPro:IPR003822 Pfam:PF02671
PROSITE:PS51477 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AL391146
Gene3D:1.20.1160.11 SUPFAM:SSF47762 eggNOG:COG5602 KO:K11644
InterPro:IPR013194 Pfam:PF08295 SMART:SM00761 HSSP:Q62141
HOGENOM:HOG000030343 ProtClustDB:CLSN2681550 EMBL:AK118953
IPI:IPI00531017 PIR:T51447 RefSeq:NP_197006.2 UniGene:At.43354
ProteinModelPortal:Q9LFQ3 SMR:Q9LFQ3 STRING:Q9LFQ3 PaxDb:Q9LFQ3
PRIDE:Q9LFQ3 EnsemblPlants:AT5G15020.1 GeneID:831354
KEGG:ath:AT5G15020 TAIR:At5g15020 InParanoid:Q9LFQ3 OMA:LFRLHRV
PhylomeDB:Q9LFQ3 Genevestigator:Q9LFQ3 Uniprot:Q9LFQ3
Length = 1367
Score = 110 (43.8 bits), Expect = 0.00012, P = 0.00012
Identities = 28/113 (24%), Positives = 60/113 (53%)
Query: 4 NVLDGNMESNSYEDTLRELFGIHAYIAFTLDKIVSNAVRQLQHLVSDETCIECYETFLKE 63
++L+G+ E++ +ED R + G +Y+ FTL+K++ V+QLQ +V+D+ + + + E
Sbjct: 1141 SLLNGSAENSKFEDECRAIIGNQSYVLFTLEKLIYKLVKQLQAVVADDMDNKLLQLYEYE 1200
Query: 64 SKKGATGGLCETAHQRVHLEQGYQKKSEVAMTDENCXXXXXXXXDCKLTIELL 116
+ + G RV + Y + + + + +EN +L+I+L+
Sbjct: 1201 NSR-RPG--------RV-FDSVYYENARILLHEENIYRLECSSSPSRLSIQLM 1243
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 203 152 0.00073 105 3 11 23 0.43 32
30 0.40 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 596 (63 KB)
Total size of DFA: 154 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 14.28u 0.08s 14.36t Elapsed: 00:00:04
Total cpu time: 14.29u 0.08s 14.37t Elapsed: 00:00:05
Start: Thu Aug 15 14:26:59 2013 End: Thu Aug 15 14:27:04 2013