BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3876
(477 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156545553|ref|XP_001605725.1| PREDICTED: probable cytosolic Fe-S cluster assembly factor
AAEL012261-like [Nasonia vitripennis]
Length = 484
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/486 (53%), Positives = 338/486 (69%), Gaps = 14/486 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGRE-EK 61
+SRFSG LQLT+LDDFI PSQECIKP+ I+K + + G+KI+IQDDG+Y + G K
Sbjct: 2 ASRFSGALQLTNLDDFITPSQECIKPVEIKK-NKSKPGSKIKIQDDGSYAEVLEGGPLTK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L KVEI+L DCLACSGCITSAESVL+TQQS EE++KV ++ + + +EN K IV+SL+
Sbjct: 61 LTKVEITLADCLACSGCITSAESVLVTQQSQEELLKVFKDKIEKQKAGDENVKFIVVSLS 120
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
IQP+LSL ++ L+ E+ L G+FK +G D+VLD+ +A SLVE EF++R+ +
Sbjct: 121 IQPILSLAERYKLTPEEAALHLTGYFKSMGADMVLDMTVAEDLSLVESAKEFVERYKAAK 180
Query: 182 G------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
P+ S CPGWVCYAEK+HG FILPYIS KSPQQ+MGSL+K HLA+ G+ P
Sbjct: 181 EGSKNQLPMLASSCPGWVCYAEKTHGNFILPYISVTKSPQQIMGSLVKYHLADVQGLSPE 240
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
+YHVTLMPCYDKKLEASR DFYN RDVDCVIT++ELE +L + +LQ+ G
Sbjct: 241 QVYHVTLMPCYDKKLEASREDFYNSLKETRDVDCVITSIELEQMLTQQ--DKSLQDFDKG 298
Query: 296 ILDWPW---DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE 352
++ P+ + N +L G+GSGGYA + +A + L +E+K LRNPD +E
Sbjct: 299 EIEKPFKTMELENSGVLLGHQGSGSGGYADFIFHYAAKYLFQVTDAKLEYKSLRNPDFQE 358
Query: 353 ATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
A G V L+F IANGFRNIQNL+QKLKR + PYD++E+MACP+GCLNGGAQIR +
Sbjct: 359 AVLEKDGQVLLKFAIANGFRNIQNLVQKLKRGKSPYDYVEVMACPTGCLNGGAQIRPQDG 418
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
P+E AL+LE L KS+P +N + LYK WL G+++DK L+T YH I K N+
Sbjct: 419 TQPRELALKLENEYHQLPKSDPEKNQAVADLYKTWLEGENSDKANAYLHTQYHEIEKMNV 478
Query: 472 ALNVKW 477
AL++KW
Sbjct: 479 ALSIKW 484
>gi|307191772|gb|EFN75214.1| Nuclear prelamin A recognition factor-like protein [Harpegnathos
saltator]
Length = 484
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/487 (53%), Positives = 340/487 (69%), Gaps = 16/487 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAY--IQETNGREE 60
+SRFSG LQ+T+LDDFI PSQECIKPI + KPSG RTG+KI+IQ D AY I E + E
Sbjct: 2 ASRFSGALQITNLDDFITPSQECIKPIEM-KPSGSRTGSKIKIQSDNAYSAINEIQ-QPE 59
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
KL+KVEI+L DCLACSGCITSAESVL+TQQS EE+++V +E A + N ++K IV+SL
Sbjct: 60 KLQKVEITLADCLACSGCITSAESVLVTQQSREELLRVFQEKVAQQNIENTDSKYIVVSL 119
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
++QP+LSL ++ L+ EQ + +L GFF +LG D VLD+ +A F+L+E EF++R+ +
Sbjct: 120 SVQPILSLAQRYELTPEQALRRLAGFFYQLGADSVLDMTMADDFALLEAAKEFIERYKAS 179
Query: 181 GG------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
P+ +S CPGWVCYAEK+HG FILP+IS KSPQQ+MGSL+K LAE +G+
Sbjct: 180 KEGAKNQLPMLSSSCPGWVCYAEKTHGNFILPHISITKSPQQIMGSLVKYRLAEIMGLSS 239
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKD 294
IYHVT+MPCYDKKLEASR DFYN++ RDVDCVIT++ELE +L NE L E +
Sbjct: 240 EQIYHVTVMPCYDKKLEASREDFYNQQKETRDVDCVITSIELEQML-NEY-DLMLSEADE 297
Query: 295 GILDWP---WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
G ++ P + E +++ G+GSGGYA + +A + L E+ V+FK LRNPD +
Sbjct: 298 GEIEQPFGSYSEEIDNKLWGHRGSGSGGYADFIFRYAAKHLFDEENVTVDFKTLRNPDFQ 357
Query: 352 EATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
EA +V L+F I NGFRNIQN++QK+KR + YD++EIMACP GCLNGGAQIR E
Sbjct: 358 EAELKKNNEVLLKFAIINGFRNIQNIVQKMKRGKCAYDYVEIMACPCGCLNGGAQIRPEG 417
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
P+E AL LE + L S P EN ++LYK WLGG+ TDK +T YH I K N
Sbjct: 418 NVQPRELALTLENMYHKLPTSNPEENKVAQNLYKTWLGGEHTDKVGAYFSTQYHEIQKMN 477
Query: 471 IALNVKW 477
AL +KW
Sbjct: 478 TALAIKW 484
>gi|307190233|gb|EFN74344.1| Nuclear prelamin A recognition factor-like protein [Camponotus
floridanus]
Length = 482
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/485 (53%), Positives = 339/485 (69%), Gaps = 14/485 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
+SRFSG LQ+T+LDDFI PSQECIKPI ++ S +TGAKI+IQ D I E + EKL
Sbjct: 2 ASRFSGALQITNLDDFITPSQECIKPIEMQS-SKSKTGAKIKIQSDNLAINEIR-QSEKL 59
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+KVEI+L DCLACSGCITSAESVL+TQQS EE+++V ++ A + + + N K IV+SL++
Sbjct: 60 QKVEITLADCLACSGCITSAESVLVTQQSQEELLRVFQDKLAQQNTGSTNIKYIVVSLSV 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF----- 177
QPVLSL + L+ EQ ++KL GFF +LG D VLD+ +A F L+E EF++R+
Sbjct: 120 QPVLSLAQHYELTPEQTLSKLAGFFYKLGADAVLDMTVADDFVLLEAAKEFVERYKANKE 179
Query: 178 -LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
+ P+ +S CPGWVCYAEK+HG FILPYIS KSPQQ+MGSL+K HLAE +G+ P
Sbjct: 180 GIKNQLPMLSSSCPGWVCYAEKTHGNFILPYISVTKSPQQIMGSLVKYHLAENMGLSPEQ 239
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DFYN++ G RDVDCVIT++ELE +L + L E +G
Sbjct: 240 IYHVTVMPCYDKKLEASREDFYNQQKGTRDVDCVITSIELEQMLNED--GLVLNEIDEGE 297
Query: 297 LDWP---WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
+ P +++ N +R+ +G+GSGGYA + +A + L E+ V+ FK LRNPD +EA
Sbjct: 298 IKQPFGSYNKENENRLWGHSGSGSGGYADFIFRYAAKNLFDEENVVINFKNLRNPDFQEA 357
Query: 354 TFTCGD-VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
D V L+F I NGFRNIQN++QK+KR + YD++EIMACP GCLNGGAQIR E
Sbjct: 358 ELKRNDQVLLKFAIINGFRNIQNIVQKVKRSKCVYDYVEIMACPCGCLNGGAQIRPEGNV 417
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIA 472
P+E A LE + L S P EN +++LYK WLGG+ TDK +T YH I K N A
Sbjct: 418 QPRELASILENVYHKLPSSRPEENKVVQNLYKTWLGGEHTDKVSAYFSTQYHEIQKMNTA 477
Query: 473 LNVKW 477
L +KW
Sbjct: 478 LAIKW 482
>gi|189240985|ref|XP_001808932.1| PREDICTED: similar to nitrate, fromate, iron dehydrogenase
[Tribolium castaneum]
gi|270012992|gb|EFA09440.1| hypothetical protein TcasGA2_TC010652 [Tribolium castaneum]
Length = 484
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/488 (53%), Positives = 334/488 (68%), Gaps = 19/488 (3%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEKL 62
SRFSGVLQLTDLDDFI PSQECIKP+ IEK S TGAKI IQDDG+Y+Q ET+G +KL
Sbjct: 2 SRFSGVLQLTDLDDFITPSQECIKPVQIEK-SKSSTGAKITIQDDGSYLQVETDGTTQKL 60
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHK-ASSNENTKTIVLSLA 121
+KVEISL+DCLACSGCITSAESVL+TQQS EE+++V EN A K A ++ K IV+SL+
Sbjct: 61 QKVEISLSDCLACSGCITSAESVLVTQQSQEEILRVFEENTALKNAGKSQEAKLIVVSLS 120
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
IQP+LS+ ++++L AKL +FK+LG D+V+D+ +A F+L+E + EF+ RF +
Sbjct: 121 IQPILSIASRYSLPVNDCAAKLVTYFKKLGADMVIDMTVADDFALLESQREFVRRFRATE 180
Query: 182 G-------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
P+ S CPGWVCYAEK+HG +ILPYIS KSPQQ+MGSLIK + LG
Sbjct: 181 SDGVKNVMPMLASSCPGWVCYAEKTHGSYILPYISTTKSPQQIMGSLIKHWVGHNLG--G 238
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKD 294
IYHVTLMPCYDKKLEA+R DF+++E RDVDCVITA+EL+ +L E L+ +
Sbjct: 239 RSIYHVTLMPCYDKKLEAAREDFFDKETQSRDVDCVITAIELQQML--EKDGCVLENLEK 296
Query: 295 GILDWPW----DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI 350
PW D + G+GSGGYA ++ +A ++L E +E+ LRNPD
Sbjct: 297 SQFSQPWLLKQDTDVCPNLTRHLGSGSGGYADHIFKYAAKELFGIEVENLEYHNLRNPDF 356
Query: 351 REATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
RE G V LRF IANGFRNIQNL+QKLKR + Y ++EIMACPSGCLNGGAQIR +
Sbjct: 357 REVVLEKEGKVLLRFAIANGFRNIQNLVQKLKRGKSQYHYVEIMACPSGCLNGGAQIRPK 416
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
+ KE ELE + L +P EN T++ LY+ WLGG +DK +L+T YH + K
Sbjct: 417 DGTALKELTTELENLYSSLPVIKPEENKTVKELYEGWLGGMESDKCTAILHTQYHAVEKT 476
Query: 470 NIALNVKW 477
ALN+KW
Sbjct: 477 TNALNIKW 484
>gi|340713495|ref|XP_003395278.1| PREDICTED: probable cytosolic Fe-S cluster assembly factor
AGAP009023-like [Bombus terrestris]
Length = 486
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/486 (52%), Positives = 344/486 (70%), Gaps = 12/486 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGA-YIQETNGREEK 61
+SRFSG LQ+T+LDDFI PSQECIKPI I+K S +TGAKI+I++DG + G+ EK
Sbjct: 2 TSRFSGALQITNLDDFITPSQECIKPIEIQK-SKSKTGAKIKIEEDGTPFALNEAGQTEK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE--NNAHKASSNENTKTIVLS 119
L+KVEI+L DCLACSGCITSAESVL+TQQS EE+M+V +E + H++ + + IV+S
Sbjct: 61 LQKVEITLADCLACSGCITSAESVLVTQQSQEELMRVFKEKVSQHHQSKDDALSTFIVVS 120
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
L++Q VLS+ ++L+ EQ + KL G+F +LG D+VLD+ +A F+L+E EF++R+ +
Sbjct: 121 LSVQAVLSIAKHYSLNPEQALNKLAGYFHQLGADIVLDMTVADDFALLESAKEFIERYKA 180
Query: 180 ------GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
G P+ +S CPGWVCYAEK+HG FILPYIS KSPQQ+MGSL+K HLAE +G+
Sbjct: 181 AKKGAKGQLPMLSSSCPGWVCYAEKTHGNFILPYISVTKSPQQIMGSLVKYHLAETMGLL 240
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEE 292
P +YHVT+MPCYDKKLEASR DFYN E +RDVDCVIT +E++ +L+ + ++E
Sbjct: 241 PEQVYHVTVMPCYDKKLEASREDFYNYERKFRDVDCVITPIEIKQMLSEYNVPINEIRER 300
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE 352
+ L E+ +L +G+GSGGYA +L +A + L VEFK LRNPD +E
Sbjct: 301 EVEKLFESQMENFKTNLLGHSGSGSGGYAEFILHYAAKHLFDETDITVEFKNLRNPDFQE 360
Query: 353 ATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
A F G L F IANGFRNIQNL+QKLKR + YD++E+MACP GCLNGGAQIR
Sbjct: 361 AVFQKDGHTLLTFAIANGFRNIQNLVQKLKRGKCSYDYVEVMACPCGCLNGGAQIRPSSN 420
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
P+E AL+LE+I +L +S P +N +++LY+ WLGG+ TDK +T YH I K++I
Sbjct: 421 IQPRELALQLESIYRELPRSNPEQNTAVQNLYRNWLGGECTDKALSYFHTQYHEIKKSDI 480
Query: 472 ALNVKW 477
AL +KW
Sbjct: 481 ALAIKW 486
>gi|350409304|ref|XP_003488687.1| PREDICTED: probable cytosolic Fe-S cluster assembly factor
AGAP009023-like [Bombus impatiens]
Length = 486
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/486 (52%), Positives = 343/486 (70%), Gaps = 12/486 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGA-YIQETNGREEK 61
+SRFSG LQ+T+LDDFI PSQECIKPI I+K S +TGAKI+I++DG + G+ EK
Sbjct: 2 TSRFSGALQITNLDDFITPSQECIKPIEIQK-SKSKTGAKIKIEEDGTPFALNEAGQSEK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT--IVLS 119
L+KVEI+L DCLACSGCITSAESVL+TQQS EE+M+V +E + + S ++ ++ IV+S
Sbjct: 61 LQKVEITLADCLACSGCITSAESVLVTQQSQEELMRVFKEKVSRRHQSKDDARSTFIVVS 120
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
L++Q VLS+ ++L+ EQ + KL G+F +LG D+VLD+ +A F+L+E EF++R+ +
Sbjct: 121 LSVQAVLSIAKHYSLNPEQALNKLAGYFYQLGADIVLDMTVADDFALLESAKEFIERYKA 180
Query: 180 GGG------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
P+ +S CPGWVCYAEK+HG FILPYIS KSPQQ+MGSL+K HLAE + +
Sbjct: 181 AKEGAKNQLPMLSSSCPGWVCYAEKTHGNFILPYISVTKSPQQIMGSLVKYHLAETMDLL 240
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEE 292
P +YHVT+MPCYDKKLEASR DFYN E +RDVDCVIT +E+E +L+ ++ ++E
Sbjct: 241 PEQVYHVTVMPCYDKKLEASREDFYNYERKFRDVDCVITPIEIEQMLSEYNVSINEIRER 300
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE 352
+ L E+ +L +G+GSGGYA +L +A + L VEFK LRNPD +E
Sbjct: 301 EVEKLFESQMEYFKTNLLGHSGSGSGGYAEFILHYAAKHLFDETDITVEFKNLRNPDFQE 360
Query: 353 ATFTCGDVT-LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
A F T L F IANGFRNIQNL+QKLKR + YD++E+MACP GCLNGGAQIR
Sbjct: 361 AVFQKDGCTLLTFAIANGFRNIQNLVQKLKRGKCSYDYVEVMACPCGCLNGGAQIRPSSN 420
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
P+E AL+LE+I +L +S P +N +++LY+ WLGG+ TDK +T YH I K++
Sbjct: 421 IQPRELALQLESIYRELPRSNPEQNTVVQNLYRDWLGGECTDKALSYFHTQYHEIKKSDT 480
Query: 472 ALNVKW 477
AL +KW
Sbjct: 481 ALAIKW 486
>gi|332020976|gb|EGI61369.1| Putative cytosolic Fe-S cluster assembly factor [Acromyrmex
echinatior]
Length = 484
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/487 (52%), Positives = 342/487 (70%), Gaps = 16/487 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAY--IQETNGREE 60
+SRFSG LQ+T+LDDFI PSQECIKPI ++ + +TGAKI+IQ D A+ + E G+ E
Sbjct: 2 ASRFSGALQITNLDDFITPSQECIKPIEMQ-ANKSKTGAKIKIQSDNAFSALNEI-GQPE 59
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
KL+KVEI+L DCLACSGCITSAESVL+TQQS EE++KV +E A + + ++K I++SL
Sbjct: 60 KLQKVEITLADCLACSGCITSAESVLVTQQSREELLKVFQEKIAQQNVGSTDSKYIIVSL 119
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
++QPVLSL + L+ EQ + KL G+F +LG D VLD+ +A F L+E EF++R+ +
Sbjct: 120 SVQPVLSLAQHYELTPEQTLHKLAGYFYQLGADAVLDMTVADDFVLLEAAKEFVERYKAS 179
Query: 181 GG------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
P+ +S CPGWVCYAEK+HG FILPYIS KSPQQ+MGSL+K HLAE + + P
Sbjct: 180 KEGTKNQLPMLSSSCPGWVCYAEKTHGNFILPYISITKSPQQIMGSLVKYHLAEVMNLSP 239
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKD 294
HIYHVT+MPCYDKKLEASR DFYN++ RDVDCVIT++ELE +L+ + L E +
Sbjct: 240 EHIYHVTVMPCYDKKLEASREDFYNQQRKTRDVDCVITSIELEQMLSED--GLVLNEIDE 297
Query: 295 GILDWPWDEHNP---HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
G + P+ +N +++ +G+GSGGYA + +A + L ++ V+FK LRNPD +
Sbjct: 298 GEIKQPFGSYNEEIGNKLWGHSGSGSGGYADFIFRYAAKNLFDEDNVTVDFKNLRNPDFQ 357
Query: 352 EATFTCGD-VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
EA + V L+F I NGFRNIQN++QK+KR + YD++EIMACP GCLNGGAQIR +
Sbjct: 358 EAELKRNNQVLLKFAIINGFRNIQNIVQKMKRGKCVYDYVEIMACPCGCLNGGAQIRPDG 417
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
P+E AL LE + L S+P EN +++LYK WLGG+ TDK NT YH I K N
Sbjct: 418 NVQPRELALTLENMYHKLPLSKPEENKVVQNLYKTWLGGEHTDKVNAHFNTQYHEIQKTN 477
Query: 471 IALNVKW 477
AL +KW
Sbjct: 478 TALAIKW 484
>gi|195116175|ref|XP_002002631.1| GI11683 [Drosophila mojavensis]
gi|259511280|sp|B4KFU7.1|NARF_DROMO RecName: Full=Probable cytosolic Fe-S cluster assembly factor
GI11683
gi|193913206|gb|EDW12073.1| GI11683 [Drosophila mojavensis]
Length = 476
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/480 (52%), Positives = 334/480 (69%), Gaps = 11/480 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SRFSG LQLTDLDDFI PSQECIKP+ I+K + +TG+KI +Q DG Y +E+ ++KL+
Sbjct: 2 SRFSGALQLTDLDDFITPSQECIKPVTIDK-TKSKTGSKITVQADG-YYEESESGKQKLQ 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KVEI+L DCLACSGCITSAE VLITQQS EE++KV+REN KAS + + +TIV ++A+
Sbjct: 60 KVEITLQDCLACSGCITSAEGVLITQQSQEELLKVLRENERLKASGDSDKVRTIVFTIAV 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP++SL +F L E+ L G+ ++LG D VL IA +L+E EF++R+
Sbjct: 120 QPLISLAHRFELGVEEAARHLSGYLRQLGADYVLSTKIADDLALLECRQEFVERYRDNAD 179
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG FILP+I+ +SPQQ+MG L+K LAEKLGV S IYHVT
Sbjct: 180 LSMLSSSCPGWVCYAEKTHGNFILPHIATTRSPQQIMGVLVKQRLAEKLGVSGSRIYHVT 239
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DFY+E RDVDCVIT++E+E +L E TLQ+ +DWPW
Sbjct: 240 VMPCYDKKLEASREDFYSEVNSSRDVDCVITSIEVEQMLQTE--EQTLQQFAPSDMDWPW 297
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESP-VVEFKPLRNPDIREATF-TCG 358
+ P M+ + T SGGYA ++ +A R+L E+P ++FK LRN D E + G
Sbjct: 298 TDQPPEAMVWAHESTMSGGYAEHIYKYAARELFNEETPNELQFKALRNRDFSEISLEKDG 357
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
+ L+F IANGFRNIQNL+QKLKR + P Y F+E+MACPSGC+NGGAQ+R +E
Sbjct: 358 KIVLKFAIANGFRNIQNLMQKLKRGKGPGYHFVEVMACPSGCINGGAQVRPTTGQHVREL 417
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+LE + L +S P +NA +H+Y +L G TDK + +L+TSYH + K N ALN+KW
Sbjct: 418 TQQLEELYKQLPRSNP-DNAHTKHIYTDFLDGTQTDKSQSLLHTSYHAVEKLNTALNIKW 476
>gi|157131925|ref|XP_001655974.1| nitrate, fromate, iron dehydrogenase [Aedes aegypti]
gi|122067377|sp|Q16ML2.1|NARF_AEDAE RecName: Full=Probable cytosolic Fe-S cluster assembly factor
AAEL012261
gi|108871353|gb|EAT35578.1| AAEL012261-PA [Aedes aegypti]
Length = 478
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/480 (52%), Positives = 331/480 (68%), Gaps = 9/480 (1%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SRFSG LQLTDLDDFI PSQECIKP+ IE + +TG+KI IQDDG+Y+Q T+ +KL+
Sbjct: 2 SRFSGALQLTDLDDFITPSQECIKPVKIET-NKSKTGSKITIQDDGSYMQATSSGLQKLE 60
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KVEI+L DCLACSGCITSAE VLITQQS EE++KV+ ENN K ++ ++ + IV ++A
Sbjct: 61 KVEITLADCLACSGCITSAEGVLITQQSQEELLKVMNENNLAKLNNQLDSVRYIVFTVAQ 120
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG-- 180
QP+LSL ++ L E+ ++ G+FK+LG D+V+D IA SL+E NEF++RF +
Sbjct: 121 QPILSLAKRYNLGPEETFERVAGYFKKLGADMVVDTKIADDLSLIESRNEFVERFNTNRQ 180
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+ S CPGWVCYAEK+HG FILP+I+ +SPQQ+MG L+K +LA+ LGV IYHV
Sbjct: 181 SMPMMASSCPGWVCYAEKTHGNFILPFIATTRSPQQIMGVLVKKYLAKILGVPGDRIYHV 240
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
T+MPCYDKKLEASR DF+++ RDVDCVIT++E+E +L + LQ + +DWP
Sbjct: 241 TVMPCYDKKLEASREDFFSDVDNCRDVDCVITSIEIEQML-DGTGIQFLQTVEPSPIDWP 299
Query: 301 WDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-G 358
W P + + +GSGGY+ + +A R+L EFK LRN D+REA G
Sbjct: 300 WPTPRPSAFVWAHESSGSGGYSEYIFKYAARKLFNINIDQAEFKILRNNDLREAILEING 359
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+V LRF IANGFRNIQN++QKLKR + Y FIEIMACPSGCLNGGAQ+R +P+E
Sbjct: 360 EVLLRFAIANGFRNIQNMVQKLKRGKCNYHFIEIMACPSGCLNGGAQVRPNSGQTPRELT 419
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWL-GGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
ELE + L +S P EN +E +Y +L +K K L+TSYH I K N ALN+KW
Sbjct: 420 AELEAMYKMLPQSNP-ENEAVEMVYTTFLDNAGDNNKRKEFLHTSYHQIEKMNTALNIKW 478
>gi|195164554|ref|XP_002023111.1| GL21135 [Drosophila persimilis]
gi|198473422|ref|XP_002133255.1| GA29080 [Drosophila pseudoobscura pseudoobscura]
gi|259511281|sp|B4GXC8.1|NARF_DROPE RecName: Full=Probable cytosolic Fe-S cluster assembly factor
GL21135
gi|259511282|sp|B5DK31.1|NARF_DROPS RecName: Full=Probable cytosolic Fe-S cluster assembly factor
GA29080
gi|194105196|gb|EDW27239.1| GL21135 [Drosophila persimilis]
gi|198139449|gb|EDY70657.1| GA29080 [Drosophila pseudoobscura pseudoobscura]
Length = 477
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 256/481 (53%), Positives = 335/481 (69%), Gaps = 12/481 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SRFSG LQLTDLDDFI PSQECIKP+ ++K + +TGAKI +Q+DG Y + +G++ KL+
Sbjct: 2 SRFSGALQLTDLDDFITPSQECIKPVTVDKTATSKTGAKITVQEDGYYEESESGKQ-KLQ 60
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KVEI+L DCLACSGCITSAESVLITQQS EE++KV+REN KA+ + E +TIV ++A
Sbjct: 61 KVEITLQDCLACSGCITSAESVLITQQSEEELLKVLRENAKVKATGDMEQVRTIVFTIAT 120
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ LS E+ L G+F+ LGVD VL +A +L+E + EF++R+
Sbjct: 121 QPLLSLAHRYQLSAEETARHLAGYFRSLGVDYVLCTKVADDLALLECQQEFVERYRDNEE 180
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG FILPYI+ +SPQQ+MG L+K LAEKL + S IYHVT
Sbjct: 181 LTMLSSSCPGWVCYAEKTHGNFILPYIATTRSPQQIMGVLVKQFLAEKLNIPGSRIYHVT 240
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DFY+E RDVDCVIT+VE+E +L + + + E D LDWPW
Sbjct: 241 VMPCYDKKLEASRMDFYSEVNESRDVDCVITSVEVEQMLNEDERSLSEHEASD--LDWPW 298
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPVVE--FKPLRNPDIREATFTCG 358
E P M+ + T SGGYA ++ A ++L E+P E FK LRN D RE +
Sbjct: 299 SEQRPESMVWSHEATLSGGYAEHIFKFAAKELF-NEAPPTELSFKQLRNRDFREISLEKD 357
Query: 359 DVT-LRFCIANGFRNIQNLIQKLKR-KRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
D T L+F IANGFRNIQNL+QKLKR K Y F+E+MACPSGC+NGGAQ+R +E
Sbjct: 358 DKTVLKFAIANGFRNIQNLVQKLKRGKGASYHFVEVMACPSGCINGGAQVRPTTGQHVRE 417
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVK 476
+LE + L +S+P +NA + +Y+ +L G TDK +L+TSYH + K + ALN+K
Sbjct: 418 LTQQLEELYKKLPRSQP-DNAHTKLIYRDFLDGSHTDKSNELLHTSYHAVEKLSTALNIK 476
Query: 477 W 477
W
Sbjct: 477 W 477
>gi|383849491|ref|XP_003700378.1| PREDICTED: probable cytosolic Fe-S cluster assembly factor
AAEL012261-like [Megachile rotundata]
Length = 485
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/489 (53%), Positives = 341/489 (69%), Gaps = 19/489 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGA-YIQETNGREEK 61
+SRFSG LQLT LDDFI PSQECIKPI I+ S +TGAKI+I++DG I G+ EK
Sbjct: 2 TSRFSGALQLTSLDDFITPSQECIKPIEIQ-ASKSKTGAKIKIEEDGVPSILNEVGQFEK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN---TKTIVL 118
L+KVEI+L DCLACSGCITSAESVL+TQQS EE+++V +E + NE+ +K IV+
Sbjct: 61 LQKVEITLADCLACSGCITSAESVLVTQQSQEELLRVFKEKVSE--CQNEDGTCSKFIVV 118
Query: 119 SLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL 178
SL++Q VLS+ ++ L+ EQ + KL G+F +LG D+V+D+ IA F+L+E EF++R+
Sbjct: 119 SLSVQAVLSIAKRYDLNPEQALNKLAGYFYQLGADIVVDMTIADDFALLESAKEFVERYK 178
Query: 179 SGGG------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
+ G P+ +S CPGWVCYAEK+HG FILPYIS KSPQQ+MGSL+K HLAE G+
Sbjct: 179 AAKGGATNQLPMLSSSCPGWVCYAEKTHGNFILPYISVTKSPQQIMGSLVKYHLAETKGL 238
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEE 292
P IYHVTLMPCYDKKLEASR DFYN E RDVDCVIT +ELE +L NE TL E
Sbjct: 239 SPEQIYHVTLMPCYDKKLEASREDFYNAERNSRDVDCVITPIELEQML-NEY-NVTLSEV 296
Query: 293 KDGILDWPW---DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
+ + P+ E+ + +G+GSGGYA + +A + L +VEFK LRNPD
Sbjct: 297 NEKEVQKPFGVQTENLETNLCSHSGSGSGGYADFIFRYAAKYLFDETDVIVEFKNLRNPD 356
Query: 350 IREATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
+EA F + L+F I NGFRNIQNL+QKLKR + PYD++E+MACP GCLNGGAQIR
Sbjct: 357 FQEAIFYKNEQPLLKFAIVNGFRNIQNLVQKLKRGKCPYDYVEVMACPCGCLNGGAQIRP 416
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
P+E AL+LE++ +L +S P +N +++LY+ WLGG+ TDK +T YH I K
Sbjct: 417 VDNIQPRELALKLESMYHELPESNPEKNKAVQNLYRNWLGGEYTDKALAHFHTQYHEIKK 476
Query: 469 NNIALNVKW 477
+IAL +KW
Sbjct: 477 ADIALAIKW 485
>gi|195030456|ref|XP_001988084.1| GH10760 [Drosophila grimshawi]
gi|259511279|sp|B4JBE6.1|NARF_DROGR RecName: Full=Probable cytosolic Fe-S cluster assembly factor
GH10760
gi|193904084|gb|EDW02951.1| GH10760 [Drosophila grimshawi]
Length = 476
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/480 (52%), Positives = 330/480 (68%), Gaps = 11/480 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SRFSG LQLTDLDDFI PSQECIKP+ I+K + +TGAKI ++ DG Y +E+ ++KL+
Sbjct: 2 SRFSGALQLTDLDDFITPSQECIKPVTIDK-TKSKTGAKITVEADG-YYEESESGKQKLQ 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKAS-SNENTKTIVLSLAI 122
KVEI+L DCLACSGCITSAE VLITQQS EE++KV+REN KAS NE +TIV ++++
Sbjct: 60 KVEITLQDCLACSGCITSAEGVLITQQSQEELLKVLRENQTLKASGDNEQVRTIVFTISV 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ LS E+ L G+ ++LG D VL IA +L+E EF++RF +
Sbjct: 120 QPLLSLAHRYDLSLEEAGRHLAGYLQQLGADYVLCTKIADDLALLECRQEFVERFRNNAE 179
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG FILP+I+ +SPQQ+MG L+K LAEKLGV S IYHVT
Sbjct: 180 LSMLSSSCPGWVCYAEKTHGNFILPHIATTRSPQQIMGVLVKQLLAEKLGVSGSRIYHVT 239
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DFY+E RDVDCVITA+E+E +L E T E KD L WPW
Sbjct: 240 IMPCYDKKLEASREDFYSEVSSSRDVDCVITAIEVEQMLQAEEQTLQQFEPKD--LHWPW 297
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPDIREATFTC-G 358
+ P ML + T SGGYA ++ +A ++L ++P ++F+ LRN D E G
Sbjct: 298 TDQQPESMLWAHESTMSGGYAEHIFKYAAKELFNEDTPTELQFRALRNRDFSEICLEKEG 357
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
V L+F IANGFRNIQNL+QKLKR + P Y F+E+MACPSGC+NGGAQ+R ++
Sbjct: 358 KVLLKFAIANGFRNIQNLVQKLKRGKGPGYQFVEVMACPSGCINGGAQVRPTTGQHVRQL 417
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+LE + L +S P +N + +Y + G TDK +L+TSYH + K N ALN+KW
Sbjct: 418 TQQLEELYKQLPRSNP-DNTHTKQIYADFFDGTHTDKSAQLLHTSYHAVEKLNTALNIKW 476
>gi|322797338|gb|EFZ19450.1| hypothetical protein SINV_01960 [Solenopsis invicta]
Length = 484
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/486 (51%), Positives = 338/486 (69%), Gaps = 14/486 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGRE-EK 61
+SRFSG LQ+T+LDDFI PSQECIKPI ++ + TGAKI+IQ D A++ + +K
Sbjct: 2 ASRFSGALQITNLDDFITPSQECIKPIEMQ-ANKSITGAKIKIQSDNAHLALNEIEQPQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+KVEI+LTDCLACSGCITSAESVL+TQQS EE+++V +E A + + ++K I++SL+
Sbjct: 61 LQKVEITLTDCLACSGCITSAESVLVTQQSREELLRVFQEKVAQQNIGSTDSKYIIVSLS 120
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---- 177
+QPVLSL ++ L+ EQ ++KL GFF RLG D VLD+ +A F L+E EF++R+
Sbjct: 121 VQPVLSLAQRYELTPEQALSKLAGFFYRLGADAVLDMTMADDFVLLEAAKEFVERYKASK 180
Query: 178 --LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
+ P+ +S CPGWVCYAEK+HG FILP+IS KSPQQ+MGSL+K HLAE +G+ P
Sbjct: 181 EGMKNQLPMLSSSCPGWVCYAEKTHGNFILPHISVTKSPQQIMGSLVKYHLAEIIGLSPE 240
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
IYHVT+MPCYDKKLEASR DFYN++ RDVDCVIT++ELE +L + L E +G
Sbjct: 241 QIYHVTVMPCYDKKLEASREDFYNQQRKMRDVDCVITSIELEQMLNED--GLILNEIDEG 298
Query: 296 ILDWPWDEHNPH---RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE 352
+ P+ ++ ++ +G+GSGGYA + +A + L ++ V+FK LRN D +E
Sbjct: 299 EIKQPFGSYSEEIGTKLWGHSGSGSGGYADFIFRYAAKNLFDEDNVTVDFKSLRNLDFQE 358
Query: 353 ATFTCGD-VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
A D V L+F I NGFRNIQN++QK+K+ + YD++EIMACP GCLNGGAQ+R +
Sbjct: 359 AELKRNDQVLLKFAIINGFRNIQNIVQKMKKGKCVYDYVEIMACPCGCLNGGAQVRPDGN 418
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
+E A LET+ L S+P EN +++LYK WLGG+ TDK NT YH I K N
Sbjct: 419 IQARELASTLETMYRKLPLSKPEENTVVQNLYKTWLGGEHTDKVNAYFNTQYHEIQKMNT 478
Query: 472 ALNVKW 477
AL +KW
Sbjct: 479 ALAIKW 484
>gi|195385200|ref|XP_002051294.1| GJ13047 [Drosophila virilis]
gi|259511293|sp|B4LQR5.1|NARF_DROVI RecName: Full=Probable cytosolic Fe-S cluster assembly factor
GJ13047
gi|194147751|gb|EDW63449.1| GJ13047 [Drosophila virilis]
Length = 476
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/480 (52%), Positives = 331/480 (68%), Gaps = 11/480 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SRFSG LQLTDLDDFI PSQECIKP+ I+K + +TGAKI +Q DG Y Q +G++ KL+
Sbjct: 2 SRFSGALQLTDLDDFITPSQECIKPVMIDK-TKSKTGAKITVQADGYYEQSESGKQ-KLQ 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKAS-SNENTKTIVLSLAI 122
KVEI+L DCLACSGCITSAE VLITQQS EE++KV+REN KAS N+ +TIV ++++
Sbjct: 60 KVEITLQDCLACSGCITSAEGVLITQQSQEELLKVLRENQTLKASGDNDQVRTIVFTISV 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ L E+ L G+ ++LG D VL IA +L+E EF++RF
Sbjct: 120 QPLLSLAHRYDLGVEEASRYLAGYLRQLGADYVLCTKIADDLALLECRQEFVERFRDNAE 179
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG FILP+I+ +SPQQ+MG L+K LAEKLGV S IYH T
Sbjct: 180 LSMLSSSCPGWVCYAEKTHGNFILPHIATTRSPQQIMGVLVKQLLAEKLGVPGSRIYHAT 239
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DFY+E G RDVDCVIT++E+E +L E TLQ+ + +DWPW
Sbjct: 240 IMPCYDKKLEASREDFYSEVNGSRDVDCVITSIEVEQMLQAE--EQTLQQFEPSDIDWPW 297
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESP-VVEFKPLRNPDIREATF-TCG 358
+ P + + T SGGYA ++ +A ++L E+P ++FK LRN D E + G
Sbjct: 298 TDQQPEFPVWAHEATMSGGYAEHIFKYAAKELFSEETPNELQFKALRNRDFSEISLEKDG 357
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
L+F IANGFRNIQNL+QKLKR + P Y F+E+MACPSGC+NGGAQ+R +E
Sbjct: 358 KTVLKFAIANGFRNIQNLVQKLKRGKGPGYHFVEVMACPSGCINGGAQVRPTTGQHVREL 417
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+LE + L +S P +N+ + +Y +L G TDK +L+TSYH + K N ALN+KW
Sbjct: 418 TQQLEELYKQLPRSNP-DNSYTKQIYTDFLDGAHTDKSLELLHTSYHAVEKLNTALNIKW 476
>gi|259511473|sp|B0WU52.2|NARF_CULQU RecName: Full=Probable cytosolic Fe-S cluster assembly factor
CPIJ010948
Length = 478
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/480 (52%), Positives = 327/480 (68%), Gaps = 9/480 (1%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SRFSG LQLTDLDDFI PSQECIKP+ IE + +TG+KI IQDDG+Y+Q T+ +KL+
Sbjct: 2 SRFSGALQLTDLDDFITPSQECIKPVKIE-ANKSKTGSKITIQDDGSYMQATSSGLQKLE 60
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KVEI+L DCLACSGCITSAE VLITQQS EE++KV+ ENN K ++ + + IV ++A
Sbjct: 61 KVEITLADCLACSGCITSAEGVLITQQSQEELLKVMNENNLAKLNNQLDAVRFIVFTVAQ 120
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ L E+ ++ G+F++LG DLV+D IA +L+E NEF++RF +
Sbjct: 121 QPILSLAKRYNLPAEETFERVAGYFRKLGADLVVDTKIADDLALIEGRNEFIERFNTNRQ 180
Query: 183 --PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+ S CPG+VCYAEK+HG FILPYI+ +SPQQ+MG L+K +LA+ LG+ IYHV
Sbjct: 181 TLPMLASSCPGFVCYAEKTHGSFILPYIASTRSPQQIMGVLVKKYLAKLLGIAADRIYHV 240
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
T+MPCYDKKLEASR DF+++ RDVDCVIT++E+E +L LQ + +DWP
Sbjct: 241 TVMPCYDKKLEASREDFFSDVENCRDVDCVITSIEIEQMLDGS-GVQALQIVEKAPIDWP 299
Query: 301 WDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCG 358
W P + + +GSGGY+ + +A R+L VEFK LRN D+REA G
Sbjct: 300 WSTGRPPVFVWGHESSGSGGYSEYLFKYAARKLFNVAVDHVEFKNLRNSDLREAVLEQNG 359
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+V LRF IANGFRNIQN++QKLKR + Y +IEIMACPSGCLNGGAQIR S +E
Sbjct: 360 EVVLRFAIANGFRNIQNMVQKLKRGKCNYHYIEIMACPSGCLNGGAQIRPTGGQSQRELT 419
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWL-GGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
ELE + L S P EN +E +Y +L + K L+TSYH I K N ALN+KW
Sbjct: 420 AELEALYRSLPASNP-ENEAVEMVYTTFLDNAGDNNMRKEFLHTSYHPIEKMNTALNIKW 478
>gi|118791474|ref|XP_319772.3| AGAP009023-PA [Anopheles gambiae str. PEST]
gi|259511483|sp|Q7PWB8.3|NARF_ANOGA RecName: Full=Probable cytosolic Fe-S cluster assembly factor
AGAP009023
gi|116117618|gb|EAA14804.3| AGAP009023-PA [Anopheles gambiae str. PEST]
Length = 478
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/480 (51%), Positives = 333/480 (69%), Gaps = 9/480 (1%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SRFS LQLTDLDDFI PSQECIKP+ IE S +TGAKI IQ+DG+Y+QE++ +KL+
Sbjct: 2 SRFSSALQLTDLDDFITPSQECIKPVKIET-SKSKTGAKITIQEDGSYVQESSSGIQKLE 60
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN-TKTIVLSLAI 122
KVEI+L DCLACSGCITSAE VLI+QQS EE+++V+ NN K ++ + K +V +++
Sbjct: 61 KVEITLADCLACSGCITSAEGVLISQQSQEELLRVMNANNLAKLNNQRDEIKFVVFTVSQ 120
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL K+ L+ E + G+FK+LG D+V+D IA +L+E NEF++R+ +
Sbjct: 121 QPILSLARKYNLTPEDTFEHIAGYFKKLGADMVVDTKIADDLALIECRNEFIERYNTNRK 180
Query: 183 --PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+ S CPGWVCYAEK+HG FILPYI+ +SPQQ+MG L+K +LA++L IYHV
Sbjct: 181 LLPMLASSCPGWVCYAEKTHGNFILPYIATTRSPQQIMGVLVKQYLAKQLQTTGDRIYHV 240
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
T+MPCYDKKLEASR DF++E RDVDCVIT++E+E +L N L +LQ + +DWP
Sbjct: 241 TVMPCYDKKLEASREDFFSEVENSRDVDCVITSIEIEQML-NSLDLPSLQLVERCAIDWP 299
Query: 301 WDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCG 358
W P + + +GSGGYA + +A R+L + V FKPLRN D+REA G
Sbjct: 300 WPTVRPSAFVWGHESSGSGGYAEYIFKYAARKLFNVQLDTVAFKPLRNNDMREAVLEQNG 359
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
V +RF IANGFRNIQN++QKLKR + YD++EIMACPSGCLNGGAQIR E+ + +E
Sbjct: 360 QVLMRFAIANGFRNIQNMVQKLKRGKSTYDYVEIMACPSGCLNGGAQIRPEEGRAARELT 419
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGK-STDKGKHMLNTSYHNIPKNNIALNVKW 477
ELE + L +S P EN ++ +Y + + +K + +L+TSYH I K N ALN+KW
Sbjct: 420 AELECMYRSLPQSTP-ENDCVQTMYATFFDSEGDLNKRQSLLHTSYHQIEKINSALNIKW 478
>gi|195434493|ref|XP_002065237.1| GK14772 [Drosophila willistoni]
gi|259511294|sp|B4MUM8.1|NARF_DROWI RecName: Full=Probable cytosolic Fe-S cluster assembly factor
GK14772
gi|194161322|gb|EDW76223.1| GK14772 [Drosophila willistoni]
Length = 477
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/480 (51%), Positives = 329/480 (68%), Gaps = 10/480 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SRFSG LQLTDLDDFI PSQECIKP+ I+K + +TGAKI +Q+DG Y + ++KL+
Sbjct: 2 SRFSGALQLTDLDDFITPSQECIKPVTIDK-TKSKTGAKITVQEDGYYEESEESGKQKLQ 60
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKAS-SNENTKTIVLSLAI 122
KVEI+L DCLACSGCITSAE VLITQQS EE++KV+REN KA+ N+ +TIV ++++
Sbjct: 61 KVEITLQDCLACSGCITSAEGVLITQQSQEELLKVLRENQKLKATGDNDLVQTIVFTISM 120
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ LS E+ L G+F+ LG D VL +A +L+E EF++RF
Sbjct: 121 QPILSLAHRYQLSVEETARHLSGYFRNLGADYVLCTKVADDLALIECRQEFVERFRDKED 180
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG FILPYI+ +SPQQ+MG L+K LAEK V S IYH T
Sbjct: 181 LTMLSSSCPGWVCYAEKTHGNFILPYIATTRSPQQIMGVLVKHFLAEKFNVPGSRIYHAT 240
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DFY+E G RDVDCVIT++E+E +L + + + E D LDWPW
Sbjct: 241 VMPCYDKKLEASREDFYSEVNGSRDVDCVITSIEVEQMLMEDERSLSQHEPVD--LDWPW 298
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESP-VVEFKPLRNPDIREATFTCGD 359
+ P M+ + T SGGYA ++ +A ++L ++ ++FK LRN D RE + D
Sbjct: 299 TDQRPESMIWAHEATMSGGYAEHIFKYAAKELFSEDTDNELKFKQLRNRDFREISLEKDD 358
Query: 360 VT-LRFCIANGFRNIQNLIQKLKR-KRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
T L+F IANGFRNIQNL+QKLKR K Y F+E+MACPSGC+NGGAQ+R +E
Sbjct: 359 KTVLKFAIANGFRNIQNLVQKLKRGKGANYHFVEVMACPSGCINGGAQVRPTTGQHVREL 418
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+LE + L S+P +N+ + +Y +L G TDK +L+TSYH + K N ALN+KW
Sbjct: 419 TQQLEELYKKLPISQP-DNSHTKAIYGDFLDGAHTDKSHDLLHTSYHAVEKLNTALNIKW 477
>gi|380011549|ref|XP_003689864.1| PREDICTED: probable cytosolic Fe-S cluster assembly factor
AGAP009023-like [Apis florea]
Length = 486
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/486 (51%), Positives = 334/486 (68%), Gaps = 12/486 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETN-GREEK 61
+SRFSG LQ+T+LDDFI PSQECIKPI I+ +TGAKI+I++DG I G+ +K
Sbjct: 2 ASRFSGALQITNLDDFITPSQECIKPIEIQTLKS-KTGAKIKIEEDGTPIALNEIGQFKK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT-IVLSL 120
L+KVEI+L DCLACSGCITSAES+L+TQQS EE+M+V RE + S + + T IV+SL
Sbjct: 61 LEKVEITLADCLACSGCITSAESILVTQQSQEELMRVFREKTSQYQSKDGISSTFIVVSL 120
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
++Q VLS+ + L+ EQ + KL G+F +LG D+VLD+ +A F+L+E EF+ R+ +
Sbjct: 121 SVQAVLSIAEHYNLNSEQALNKLAGYFYQLGADIVLDMTVADDFALLESAKEFIQRYRAN 180
Query: 181 GG------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
P+ +S CPGWVCYAEK+HG FILPYIS KSPQQ+MGSL+K HLAE + + P
Sbjct: 181 KNGVKNQLPMLSSSCPGWVCYAEKTHGNFILPYISVTKSPQQIMGSLVKYHLAETMNLSP 240
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL--ANELATTTLQEE 292
IYH+T+MPCYDKKLEASR DFYN E+ RDVDCVIT +E+E + N + + E+
Sbjct: 241 EQIYHITVMPCYDKKLEASREDFYNHEIKSRDVDCVITPIEIEQMFNEYNVILSEINNEK 300
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE 352
K + ++ + + +G+GSGGYA +L +A + L ++EFK LRNPD +E
Sbjct: 301 KIQRIFESKMKYLKNDLYGHSGSGSGGYAEFILRYAAKYLFNETDIIIEFKNLRNPDFQE 360
Query: 353 ATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
A F G L F IANGFRNIQNL+QKLKR + YD++E+MACP GCLNGGAQIR
Sbjct: 361 AIFQKDGQTLLTFAIANGFRNIQNLVQKLKRGKCLYDYVEVMACPCGCLNGGAQIRPLNN 420
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
+E AL+LE+I +L +S P +N +++LYK WLGG+ TDK +T YH I K +
Sbjct: 421 VQSRELALKLESIYRELPQSNPEQNLIVKNLYKNWLGGEYTDKALAYFHTQYHEIKKVDT 480
Query: 472 ALNVKW 477
AL +KW
Sbjct: 481 ALAIKW 486
>gi|291226566|ref|XP_002733248.1| PREDICTED: nuclear prelamin A recognition factor-like [Saccoglossus
kowalevskii]
Length = 479
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/482 (51%), Positives = 312/482 (64%), Gaps = 11/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFI PSQEC+KP+ +EK +G R +I+I+DDG+Y +G K
Sbjct: 2 ASHFSGALQLTDLDDFITPSQECVKPVKVEKSAGGR--GRIKIEDDGSYFHINESGEATK 59
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAH-KASSNENTKTIVLSL 120
LKK EI+L DCLACSGCITSAESVLITQQS EE+ K I EN H K + E K I++S+
Sbjct: 60 LKKAEITLDDCLACSGCITSAESVLITQQSQEELYKAIEENRIHCKNGTPEKEKVIIVSV 119
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF--- 177
+ Q SL AK+ LS AK+ GFFK +GV V D FSL+E EF+ RF
Sbjct: 120 SPQSRASLAAKYGLSVYDAAAKITGFFKNIGVHYVFDTTFTRDFSLIESGREFITRFKKS 179
Query: 178 -LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
G P+ S CPGWVCYAEK+HG +ILPYIS KSPQQ+MGSL+K + A+K
Sbjct: 180 TQKGSLPMLASACPGWVCYAEKTHGSYILPYISTTKSPQQIMGSLVKDYFAKKHNKTADQ 239
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPC+DKKLEASR DFYN+ RDVDCVIT+ E+EV+L E E D
Sbjct: 240 IYHVTVMPCFDKKLEASRQDFYNDIYRTRDVDCVITSGEVEVMLEKEGVLLADVESHD-- 297
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + + ++ G+GSGGY +L HA +L + +++K LRN D +E T
Sbjct: 298 LDTIFTRSENNEVIGHGGSGSGGYLEYILKHAALELYGHQVDSIQYKMLRNKDFKEVTLE 357
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L+F IANGFRNIQNL+QK+KR + PY F+E+MACPSGCLNGG QIR E +
Sbjct: 358 VNGKVELKFAIANGFRNIQNLVQKIKRGKSPYHFVEVMACPSGCLNGGGQIRAENLQGAN 417
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
+ ++E I P+EN +E LY WLGG +DK + ML+T YH I K+ ALN+
Sbjct: 418 DLLTKVEEIYHSAQTRTPQENGAMETLYADWLGGMDSDKMRTMLHTQYHEIEKDTSALNL 477
Query: 476 KW 477
KW
Sbjct: 478 KW 479
>gi|357624217|gb|EHJ75079.1| hypothetical protein KGM_01773 [Danaus plexippus]
Length = 484
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/488 (51%), Positives = 322/488 (65%), Gaps = 18/488 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
+SRFSG LQLTDLDDFI PSQECIKP+ IEK TG+KI+I +DG Y ++G+E+KL
Sbjct: 2 ASRFSGALQLTDLDDFITPSQECIKPVKIEKKKT-HTGSKIKIGEDG-YFDLSSGKEQKL 59
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLA 121
+KVEI+L DCLACSGCITSAESVLIT+QS EE+++V E + ++ IV+S++
Sbjct: 60 QKVEITLADCLACSGCITSAESVLITKQSQEELLRVFSERKYTDSRGVIQDVSLIVISIS 119
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
QP+LSL ++ L E+ KL G+F+ LG DLVLD+ +A SL+E + EF+ R+
Sbjct: 120 PQPLLSLAVRYKLEPEEATRKLAGYFRSLGADLVLDMTVAEDLSLMEAQQEFVQRYRDQA 179
Query: 182 G------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
P+ S CPGWVCYAEK+HG +ILPYIS KS QQVMGSL+K LA K + P+
Sbjct: 180 DSDVKTLPMLASACPGWVCYAEKAHGSYILPYISTTKSSQQVMGSLVKQFLATKRQLAPA 239
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
+YHVTLMPCYDKKLEASR DFYNE L DVDCVIT +ELE +L N+ L + D
Sbjct: 240 ALYHVTLMPCYDKKLEASREDFYNEILNCHDVDCVITPIELEQMLTNQ--DKDLSDFPDS 297
Query: 296 ILDWPWD-EHNP----HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI 350
LDW WD P H +GSGG A V +A R+L E + +K LRNPD
Sbjct: 298 SLDWCWDVAMTPGVRRHGGRGAGSSGSGGLADEVFMYAARELFGEEDVPLVYKNLRNPDF 357
Query: 351 REATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
RE T G LRF IANGFRNIQNL+QKLKR + PY ++E+MACPSGCLNGGAQ+R
Sbjct: 358 REITLEKDGREVLRFAIANGFRNIQNLVQKLKRGKSPYHYVEVMACPSGCLNGGAQVRPT 417
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
+ S + L+ ++ L +EP A + HL+ AWLG ++ +H L+T+YH + N
Sbjct: 418 EGESGRALVGRLQELMETLPPAEPSGTA-VRHLWSAWLGAAGPERARHALHTTYHAVQSN 476
Query: 470 NIALNVKW 477
+IAL KW
Sbjct: 477 DIALTTKW 484
>gi|328793099|ref|XP_003251826.1| PREDICTED: probable cytosolic Fe-S cluster assembly factor
AGAP009023-like [Apis mellifera]
Length = 483
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/486 (50%), Positives = 331/486 (68%), Gaps = 15/486 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
+SRFSG LQ+T+LDDFI PSQECIKPI I+ +T + ET G+ +KL
Sbjct: 2 ASRFSGALQITNLDDFITPSQECIKPIEIQALKS-KTXXXXXXXGTPIPLNET-GQFKKL 59
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+KVEI+L DCLACSGCITSAES+L+TQQS EE+M+V RE +++ ++ IV+SL++
Sbjct: 60 EKVEITLADCLACSGCITSAESILVTQQSQEELMRVFREKTQYQSRDGISSTFIVVSLSV 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
Q VLS+ + L+ EQ + KL G+F +LG D+VLD+ +A F+L+E EF+ R+ +
Sbjct: 120 QAVLSIAEHYNLNSEQALNKLAGYFYQLGADIVLDMTVADDFALLESAKEFIQRYRANKN 179
Query: 183 ------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ +S CPGWVCYAEK+HG FILPYIS KSPQQ+MGSL+K HLA+ + + P
Sbjct: 180 GAKNQLPMLSSSCPGWVCYAEKTHGNFILPYISVTKSPQQIMGSLVKYHLAKIMDLSPKQ 239
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE----LATTTLQEE 292
IYH+T+MPCYDKKLEASR DFY+ E+ RDVDCVIT +E+E + NE L+ ++++
Sbjct: 240 IYHITVMPCYDKKLEASREDFYDHEIKSRDVDCVITPIEIEQMF-NEYNVILSEIKIEKK 298
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE 352
I + ++ + + +G+GSGGYA +L +A + L ++EFK LRNPD +E
Sbjct: 299 IQRIFESKM-KYLKNDLYGHSGSGSGGYAEFILRYAAKYLFNETDIIIEFKSLRNPDFQE 357
Query: 353 ATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
A F G + L F IANGFRNIQNL+QKLKR + YD++EIMACP GCLNGGAQIR
Sbjct: 358 AVFQKDGQILLTFAIANGFRNIQNLVQKLKRGKCLYDYVEIMACPCGCLNGGAQIRPLNN 417
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
+E AL+LE+I +L +S+P +N +++LYK WLGG+ TDK +T YH I K N
Sbjct: 418 VQSRELALKLESIYRELPQSDPEQNLIVKNLYKNWLGGEYTDKALAYFHTQYHEIKKVNT 477
Query: 472 ALNVKW 477
AL +KW
Sbjct: 478 ALAIKW 483
>gi|289740813|gb|ADD19154.1| nitrate iron dehydrogenase [Glossina morsitans morsitans]
Length = 479
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/490 (49%), Positives = 319/490 (65%), Gaps = 28/490 (5%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
S FSG LQLTDLDDFI PSQECIKP+ IEK + P+TGAKI IQDDG Y QET KL+
Sbjct: 2 SHFSGALQLTDLDDFITPSQECIKPVIIEK-TKPKTGAKISIQDDG-YYQETEDGSRKLQ 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASS--NENTKTIVLSLA 121
KVEI+L DCLACSGCITSAE VLITQQS EE++KV+ EN + K++ ++ + +V +++
Sbjct: 60 KVEITLQDCLACSGCITSAEGVLITQQSQEELLKVLNENQSLKSNEKFSDEARVVVFTIS 119
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
QPVLSL ++ L+ E + L G+ + LG D++L+ IA +L+E EF+DRF S
Sbjct: 120 QQPVLSLAQRYGLTVENTIKHLSGYLRHLGADIILNTKIADDLALLECRREFIDRFRSKS 179
Query: 182 G----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P+ TS CPGWVCYAEK+HG FILPY+S +SPQQ+MG L+K LA+KL V I
Sbjct: 180 QEQPLPMLTSSCPGWVCYAEKTHGNFILPYLSTTRSPQQIMGILVKQWLAKKLKVKSEQI 239
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE---------LATTT 288
YHVT+MPCYDKKLEASR DF++E +DVDCVIT++E+E +L++E
Sbjct: 240 YHVTIMPCYDKKLEASRHDFFSEVENSKDVDCVITSIEIEQMLSSESLEKYPASKFDDVF 299
Query: 289 LQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNP 348
+ +G D W + SGGY+ ++ ++ + L + +E+K LRNP
Sbjct: 300 DVVDDNGPSDTIWG---------YESSTSGGYSEHIFKYSAKHLFDMDVATLEYKNLRNP 350
Query: 349 DIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
D RE G L+F IANGFRNIQNL+QKLKR + Y F+E+MACPSGC+NGGAQIR
Sbjct: 351 DFREVVLEKDGKCLLKFAIANGFRNIQNLVQKLKRGKTQYHFVEVMACPSGCINGGAQIR 410
Query: 408 NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
+ +E +LE + L +S P N T E +Y + G T+K K L+T+YH +
Sbjct: 411 PVSGQTVRELTSQLEHLYRQLPQSNPN-NLTCESMYNNFFDGFHTEKSKMFLHTTYHAVE 469
Query: 468 KNNIALNVKW 477
K N ALN+KW
Sbjct: 470 KLNTALNIKW 479
>gi|242017847|ref|XP_002429397.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514316|gb|EEB16659.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 473
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/482 (50%), Positives = 329/482 (68%), Gaps = 17/482 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
+SRFSG LQLTDLDDFI PSQECIKP+ I+K + TG+KI+IQDDG Y + G+ +KL
Sbjct: 2 ASRFSGALQLTDLDDFITPSQECIKPVEIKK-NPTSTGSKIKIQDDGYYEENNFGQVQKL 60
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+KV+I+L DCLACSGCITSAE VLI QQ+ EV+K + +NN K N +K +V+SL+I
Sbjct: 61 QKVQITLNDCLACSGCITSAEGVLINQQNFTEVLKFLDDNNNFK--KNGTSKIVVISLSI 118
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL K++++ E+V L FK LG D V+++ +A +L+E + EF++R+ +
Sbjct: 119 QPILSLSEKYSMNPEKVAGCLVTLFKSLGADKVVEMSLAEDLALMESQFEFVERYRNSDK 178
Query: 183 -----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P+ +S CPGW+CYAEKSHG FILPYIS KSPQQ++GSLIK +L G P +
Sbjct: 179 NLKKMPMLSSSCPGWICYAEKSHGSFILPYISTTKSPQQIIGSLIKYNL----GYSPEQV 234
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGI 296
YHVTLMPCYDKKLEASR +F+N +L +DVDCV+T +ELE LL+ + +TLQ G
Sbjct: 235 YHVTLMPCYDKKLEASRNEFFNSQLNVKDVDCVLTTIELEQLLSERNILFSTLQP---GT 291
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD+PW + + + +G+GSGGYA NV+++A ++L + +K +RNPD E T
Sbjct: 292 LDYPWGQPSDKLLRGHSGSGSGGYAENVITYAAQELFGIRLENLNWKVVRNPDFTEVTVE 351
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
L F IANGFRNIQN++QK+KR + PY +IEIMACPSGCLNGGAQIR + K
Sbjct: 352 HESKQVLNFAIANGFRNIQNIVQKIKRNKCPYHYIEIMACPSGCLNGGAQIRPDSSIHTK 411
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E +LE + +L P +N L+ LY WL G +DK +L+T+Y + K +ALN+
Sbjct: 412 EFINKLENLYKNLPIVSPEKNLQLQQLYTKWLDGIGSDKSVALLHTTYREVEKTQLALNI 471
Query: 476 KW 477
KW
Sbjct: 472 KW 473
>gi|194769624|ref|XP_001966903.1| GF22738 [Drosophila ananassae]
gi|259511277|sp|B3N018.1|NARF_DROAN RecName: Full=Probable cytosolic Fe-S cluster assembly factor
GF22738
gi|190619860|gb|EDV35384.1| GF22738 [Drosophila ananassae]
Length = 476
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/480 (50%), Positives = 327/480 (68%), Gaps = 11/480 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SRFSG LQLTD+DDFI P+QECIKPIPI K + ++GAKI +Q+DG Y +E+ ++KL+
Sbjct: 2 SRFSGALQLTDIDDFITPAQECIKPIPINKKNS-KSGAKISVQEDG-YYEESGTGKQKLQ 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN-TKTIVLSLAI 122
K+EI+L DCLACSGCITSAE VLITQQS EE++KV+ EN KA + N ++T+V S+A
Sbjct: 60 KLEITLQDCLACSGCITSAEGVLITQQSQEELLKVLHENKKLKAEEDNNLSRTVVFSVAT 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP++SL ++ +S E+ L G+F+ LG D VL +A +L+E NEFL+++
Sbjct: 120 QPLISLAYRYKISVEETARHLAGYFRSLGADYVLSTKVADDLALLECRNEFLEKYRENND 179
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+F+S CPGWVCYAEK+HG FILP+I+ +SPQQ+MG L+K +L +KL + S IYHVT
Sbjct: 180 LTMFSSSCPGWVCYAEKTHGNFILPHIATTRSPQQIMGVLVKQYLGKKLNLPASRIYHVT 239
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DF++E RDVDCVIT+VE+E +L T QE D LDWPW
Sbjct: 240 VMPCYDKKLEASREDFFSEVNASRDVDCVITSVEVEQMLLEVDQTLPAQEPAD--LDWPW 297
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPDIREATF-TCG 358
+ P M+ + T SGGYA +V A R+L P+ ++ RN D++E G
Sbjct: 298 WDERPELMVYSHESTYSGGYAEHVFRFAARELFNDARPIQLQIDQPRNRDLKEFFLEKDG 357
Query: 359 DVTLRFCIANGFRNIQNLIQKLKR-KRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
V LRF IANGF+NIQNL+QKLKR K + F+EIMACPSGC+NGGAQ+R +E
Sbjct: 358 IVLLRFAIANGFKNIQNLVQKLKRGKGSKFHFVEIMACPSGCINGGAQVRPISGQHVREL 417
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+LE + L +S+P +N + LY + G TDK ++L+TSYH++ K ALN+KW
Sbjct: 418 TQKLEELYTKLPRSQP-DNIGTKKLYDDFFDGFGTDKSHNLLHTSYHSVDKLIPALNIKW 476
>gi|193669298|ref|XP_001943301.1| PREDICTED: probable cytosolic Fe-S cluster assembly factor
AAEL012261-like [Acyrthosiphon pisum]
Length = 477
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/489 (50%), Positives = 330/489 (67%), Gaps = 24/489 (4%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQET-NGRE 59
M SS FSG L+LTDLDDFI PS ECIKP+ EK S TGAKI+I DDG+Y+QE+ NG+
Sbjct: 1 MISSGFSGALKLTDLDDFITPSLECIKPVQFEK-SSLGTGAKIKIGDDGSYMQESKNGKS 59
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLS 119
EKLK+VEISLTDCLACSGCITSAE+VL+ QQS +E+M+V N +N K IV+S
Sbjct: 60 EKLKQVEISLTDCLACSGCITSAETVLVQQQSTDEMMRVFDAQNGL-----DNKKFIVVS 114
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
++IQ +S+ +S E +KLCG+FK+LG DLVLD+ +A +L+E +NEF++R+ S
Sbjct: 115 ISIQSCVSIATSKNISVECAASKLCGYFKKLGADLVLDIKLAEDLALLESQNEFIERYKS 174
Query: 180 GGG-------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
P+ S CPGWVCYAEK+HG FILPYISRVKSPQQ+MGS IK ++
Sbjct: 175 AKASKVQKILPMLASSCPGWVCYAEKTHGNFILPYISRVKSPQQIMGSFIKDFVSNLRNK 234
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE---LATTTL 289
+ IYH+T+MPC+DKKLEASR F++ + +DVDCVIT++E++ LL +
Sbjct: 235 PRTDIYHLTVMPCFDKKLEASRDQFFDVDTETKDVDCVITSIEVDALLVKQDINFNDIVP 294
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
+ G+ + D HN + +G+GSGGYAH++ +A ++L VEFKPLRN D
Sbjct: 295 ENFDTGMNNITEDNHN---LFTSSGSGSGGYAHHIFCNAAKELFNINIDKVEFKPLRNVD 351
Query: 350 IREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
++EAT G V LRF IANGFRNIQNL+QKLK KR PYD++E+MACPSGCLNGGAQ++
Sbjct: 352 MKEATLEVNGVVVLRFAIANGFRNIQNLVQKLKSKRCPYDYVEVMACPSGCLNGGAQVKQ 411
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
++ S +E LE +L K P +N ++++LY WL +K ++ T+Y I K
Sbjct: 412 MEIKSNREFINALENTYNELPKRNPTQNNSVKYLYSNWLN--ENNKNDYLF-TTYREIKK 468
Query: 469 NNIALNVKW 477
+ LN+KW
Sbjct: 469 IDQPLNIKW 477
>gi|259511474|sp|B4IMH3.2|NARF_DROSE RecName: Full=Probable cytosolic Fe-S cluster assembly factor
GM20417
Length = 477
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/481 (50%), Positives = 325/481 (67%), Gaps = 12/481 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SR+S LQLTD+DDFI PSQ CIKP+ I+K +TGAKI+I+ D + +E+ KL
Sbjct: 2 SRWSTALQLTDIDDFITPSQICIKPVQIDKARS-KTGAKIKIKGDSCF-EESESGNLKLN 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KV+ISL DCLACSGCITSAE VLITQQS EE++K+++EN+ +KAS + +N +TIV++LA
Sbjct: 60 KVDISLQDCLACSGCITSAEEVLITQQSQEELLKILQENSKNKASEDWDNVRTIVITLAT 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ + E L G+F+ LG D VL +A +L+E EF+DR+
Sbjct: 120 QPLLSLAHRYQIGVEDAARHLNGYFRSLGADYVLSTKVADDIALLECRQEFVDRYRENEN 179
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG FILPY+S +SPQQ+MG L+K LA+K+ V S IYHVT
Sbjct: 180 LTMLSSSCPGWVCYAEKTHGNFILPYVSTTRSPQQIMGVLVKQILADKINVPASRIYHVT 239
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DF+++ RDVDCVIT+VE+E LL+ A L + LDWPW
Sbjct: 240 VMPCYDKKLEASREDFFSKANNSRDVDCVITSVEVEQLLSE--AQRPLSQYDLFDLDWPW 297
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGE-SPVVEFKPLRNPDIREATF-TCG 358
P M+ + T SGGYA ++ A + + + + +EFK L+N D RE G
Sbjct: 298 SNVRPEFMVWAHEKTQSGGYAEHIFKFAAKHIFNEDLTTELEFKQLKNRDFREIILKQNG 357
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
L+F IANGFRNIQNL+QKLKR++L Y F+E+MACPSGC+NGGAQIR +E
Sbjct: 358 KTVLKFAIANGFRNIQNLVQKLKREKLSNYHFVEVMACPSGCINGGAQIRPTTGQHVREL 417
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN-NIALNVK 476
+LE + +L +SEP EN+ +H+Y +L G TDK ML+T YH++ + +I+LN+
Sbjct: 418 TRKLEELYHNLPRSEP-ENSLTKHIYNDFLDGFQTDKSYEMLHTRYHDVVSDLSISLNIN 476
Query: 477 W 477
W
Sbjct: 477 W 477
>gi|443689646|gb|ELT92002.1| hypothetical protein CAPTEDRAFT_150962 [Capitella teleta]
Length = 476
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/481 (48%), Positives = 316/481 (65%), Gaps = 12/481 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+SRFSG LQLTDLDDFI PSQECIKP+ +EK SG GAKI+I++DG+Y++ + G E K
Sbjct: 2 ASRFSGALQLTDLDDFITPSQECIKPVKVEKKSG--LGAKIKIENDGSYMEVDEGGYEVK 59
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISLTDCLACSGC+TSAESVLI++QS EE+ KV+ +N A + +S K IV+SL+
Sbjct: 60 LQKAQISLTDCLACSGCVTSAESVLISEQSQEELYKVLSQNAAIEDASAR--KMIVVSLS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---- 177
Q + SL AKF+LS + +L FFK++G D V D+ IA SL+E EF+ R
Sbjct: 118 HQSITSLAAKFSLSANEAAVRLSTFFKQIGSDRVYDISIARDISLIESCREFVKRHSNQA 177
Query: 178 LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
G P+ S CPGWVCYAEK+HG +ILP+I+ KSPQQ+MGSL+K ++ G+ I
Sbjct: 178 TKGSLPMLASACPGWVCYAEKTHGSYILPHIASTKSPQQIMGSLVKDFVSSSFGLSADRI 237
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL 297
YH+T+MPC+DKKLEASR DFY+E +DVDCVI+ E+E +L E L + L
Sbjct: 238 YHITVMPCFDKKLEASRTDFYDEICSTKDVDCVISTGEVEQMLLKE--NVALNDLDSTSL 295
Query: 298 DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-T 356
D + + + G GSGGY +V+ +A ++L E +++K +RN D +E
Sbjct: 296 DSIFGNSDEGVLASHQGGGSGGYLEHVMRYAAKELHGIEVDELKYKVMRNQDFQEVMVEK 355
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
V L+F IA GFRNIQN++QK+KR +LPY ++EIMACPSGCLNGG QIR E +PK+
Sbjct: 356 DSKVVLKFAIAYGFRNIQNIVQKIKRGKLPYQYVEIMACPSGCLNGGGQIRPEDNETPKD 415
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVK 476
L I ++ P +E LY WLGG ++K +L+T YH + K N ALN+K
Sbjct: 416 LLSRLNEIYRNMPTRMPFHQNEVEDLYDNWLGGVDSEKANRLLHTKYHEVEKINTALNIK 475
Query: 477 W 477
W
Sbjct: 476 W 476
>gi|259511475|sp|B4NSS7.2|NARF_DROSI RecName: Full=Probable cytosolic Fe-S cluster assembly factor
GD17698
Length = 477
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/481 (50%), Positives = 324/481 (67%), Gaps = 12/481 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SR S LQLTD+DDFI PSQ CIKP+ I+K +TGAKI+I+ D + +E+ KL
Sbjct: 2 SRLSTALQLTDIDDFITPSQICIKPVQIDKARS-KTGAKIKIKGDSCF-EESESGNLKLN 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KV+ISL DCLACSGCITSAE VLITQQS EE++KV++EN+ +KAS + +N +TIV++LA
Sbjct: 60 KVDISLQDCLACSGCITSAEEVLITQQSQEELLKVLQENSKNKASEDWDNVRTIVITLAT 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ + E L G+F+ LG D VL +A +L+E EF+DR+
Sbjct: 120 QPILSLAHRYQIGVEDAARHLNGYFRSLGADYVLSTKVADDIALLECRQEFVDRYRENEN 179
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG FILPY+S +SPQQ+MG L+K LA+K+ V S IYHVT
Sbjct: 180 LTMLSSSCPGWVCYAEKTHGNFILPYVSTTRSPQQIMGVLVKQILADKINVPASRIYHVT 239
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DF+++ RDVDCVIT+VE+E LL+ A L + LDWPW
Sbjct: 240 VMPCYDKKLEASREDFFSKANNSRDVDCVITSVEVEQLLSE--AQRPLSQYDLFDLDWPW 297
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGE-SPVVEFKPLRNPDIREATF-TCG 358
P M+ + T SGGYA ++ A + + + + +EFK LRN D RE G
Sbjct: 298 SNVRPEFMVWAHEKTLSGGYAEHIFKFAAKHIFNEDLTTELEFKQLRNRDFREIILKQNG 357
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
L+F IANGFRNIQNL+QKLKR++L Y F+E+MACPSGC+NGGAQIR +E
Sbjct: 358 KTVLKFAIANGFRNIQNLVQKLKREKLSNYHFVEVMACPSGCINGGAQIRPTTGQHVREL 417
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN-NIALNVK 476
+LE + +L +SEP EN+ +H+Y +L G TDK +L+T YH++ + +I+LN+
Sbjct: 418 TRKLEELYHNLPRSEP-ENSLTKHIYNDFLDGFQTDKSYEVLHTRYHDVVSDLSISLNIN 476
Query: 477 W 477
W
Sbjct: 477 W 477
>gi|116007464|ref|NP_001036428.1| CG17683, isoform A [Drosophila melanogaster]
gi|74866134|sp|Q8SYS7.1|NARF_DROME RecName: Full=Probable cytosolic Fe-S cluster assembly factor
CG17683
gi|17945827|gb|AAL48960.1| RE37350p [Drosophila melanogaster]
gi|30923684|gb|EAA46161.1| CG17683, isoform A [Drosophila melanogaster]
gi|220948432|gb|ACL86759.1| CG17683-PA [synthetic construct]
gi|220957562|gb|ACL91324.1| CG17683-PA [synthetic construct]
Length = 477
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/481 (49%), Positives = 323/481 (67%), Gaps = 12/481 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SR S LQLTD+DDFI PSQ CIKP+ I+K +TGAKI+I+ DG + +E+ KL
Sbjct: 2 SRLSRALQLTDIDDFITPSQICIKPVQIDKARS-KTGAKIKIKGDGCF-EESESGNLKLN 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KV+ISL DCLACSGCITSAE VLITQQS EE++KV++EN+ +KAS + +N +TIV +LA
Sbjct: 60 KVDISLQDCLACSGCITSAEEVLITQQSREELLKVLQENSKNKASEDWDNVRTIVFTLAT 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ + E L G+F+ LG D VL +A +L+E EF+DR+
Sbjct: 120 QPILSLAYRYQIGVEDAARHLNGYFRSLGADYVLSTKVADDIALLECRQEFVDRYRENEN 179
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG F+LPY+S +SPQQ+MG L+K LA+K+ V S IYHVT
Sbjct: 180 LTMLSSSCPGWVCYAEKTHGNFLLPYVSTTRSPQQIMGVLVKQILADKMNVPASRIYHVT 239
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DF+++ RDVDCVIT+VE+E LL+ A L + LDWPW
Sbjct: 240 VMPCYDKKLEASREDFFSKANNSRDVDCVITSVEVEQLLSE--AQQPLSQYDLLDLDWPW 297
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPDIREATF-TCG 358
P M+ + T SGGYA ++ +A + + + +EFK L+N D RE G
Sbjct: 298 SNVRPEFMVWAHEKTLSGGYAEHIFKYAAKHIFNEDLKTELEFKQLKNRDFREIILKQNG 357
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
L+F IANGFRNIQNL+QKLKR+++ Y F+E+MACPSGC+NGGAQIR +E
Sbjct: 358 KTVLKFAIANGFRNIQNLVQKLKREKVSNYHFVEVMACPSGCINGGAQIRPTTGQHVREL 417
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN-NIALNVK 476
+LE + +L +SEP EN+ +H+Y +L G +DK +L+T YH++ +I+LN+
Sbjct: 418 TRKLEELYQNLPRSEP-ENSLTKHIYNDFLDGFQSDKSYDVLHTRYHDVVSELSISLNIN 476
Query: 477 W 477
W
Sbjct: 477 W 477
>gi|195476070|ref|XP_002085972.1| GE22682 [Drosophila yakuba]
gi|259511295|sp|B4ISL0.1|NARF_DROYA RecName: Full=Probable cytosolic Fe-S cluster assembly factor
GE22682
gi|194185754|gb|EDW99365.1| GE22682 [Drosophila yakuba]
Length = 477
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/482 (50%), Positives = 325/482 (67%), Gaps = 14/482 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SR S LQLTD+DDFI PSQ CIKP+ I+K +TGAKI+I+ D + + +G++ KL
Sbjct: 2 SRLSRALQLTDIDDFITPSQICIKPVEIDKARS-KTGAKIKIKGDSCFEESESGKQ-KLN 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KVEI+L DCLACSGCITSAE VLITQQS EE+++V++EN+ KA+ + +N +TIV S+A
Sbjct: 60 KVEITLQDCLACSGCITSAEGVLITQQSQEELLRVLQENSKKKATEDWDNVRTIVFSVAT 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ + E L G+F+ LG + VL +A +L+E EF++R+
Sbjct: 120 QPLLSLAHRYQIGVEDAARHLAGYFRSLGGNYVLSTKVADDIALLECRQEFVERYRENEN 179
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG FILPY+S +SPQQ+MG L+K LAEKL + S IYHVT
Sbjct: 180 LTMLSSSCPGWVCYAEKTHGNFILPYVSTTRSPQQIMGVLVKHILAEKLNIPASRIYHVT 239
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DF+++ RDVDCVIT+VE+E LL A TL + LDWPW
Sbjct: 240 VMPCYDKKLEASRDDFFSKTNNSRDVDCVITSVEVEQLLGE--AQRTLSQFDPLDLDWPW 297
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPV--VEFKPLRNPDIREATF-TC 357
P M+ + T SGGYA +V A +Q+ E P +EFK L+N D RE
Sbjct: 298 SNVRPDLMVWAHEKTLSGGYAEHVFKFAAKQIF-NEVPTNELEFKQLKNRDFREIILKKN 356
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G+ L+F IANGFRNIQN++QKLKR ++ Y F+E+MACPSGC+NGGAQIR +E
Sbjct: 357 GNTVLKFAIANGFRNIQNMVQKLKRGKVSNYHFVEVMACPSGCINGGAQIRPTTGQHVRE 416
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN-NIALNV 475
+LE + +L SEP EN+ +H+YK +L G T+K +L+TSYH++ +I+LN+
Sbjct: 417 LTRKLEELYHNLPLSEP-ENSLTKHIYKDFLDGFQTEKSYELLHTSYHDVVSELSISLNI 475
Query: 476 KW 477
W
Sbjct: 476 NW 477
>gi|432868376|ref|XP_004071507.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
isoform 1 [Oryzias latipes]
Length = 475
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/482 (48%), Positives = 318/482 (65%), Gaps = 15/482 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSGVLQLTDLDDFI PSQEC+KPI +EK G ++ A+I+I+DDG+Y+Q +G +EK
Sbjct: 2 ASVFSGVLQLTDLDDFITPSQECVKPIKVEKKQG-KSVARIQIEDDGSYVQVNQDGGKEK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGCITSAESVLITQQS EE++KV+R N K ++ + KT+V+S++
Sbjct: 61 LEKAKISLNDCLACSGCITSAESVLITQQSPEELLKVLRNN---KGAAEQ--KTVVVSVS 115
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A F +S + +L F K LGV V D + FSL+E + EF++RF G
Sbjct: 116 PQSRASLAAHFGISSSEAGRRLTSFLKNLGVHYVFDTSFSRTFSLLESQREFVERFQRKG 175
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ TS CPGW+CYAEK+HGE+ILPYIS +SPQQ+MGSL+K+H AEK G+ P
Sbjct: 176 QDNKALPMLTSACPGWICYAEKTHGEYILPYISTTRSPQQMMGSLVKSHFAEKQGLSPQQ 235
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHV +MPC+DKKLEASR+DF+ + R+VDCVIT+ E++ +L E +L + + G
Sbjct: 236 IYHVAVMPCFDKKLEASRSDFFMNKAETREVDCVITSGEVQKML--EEHHISLNDVEPGT 293
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF- 355
LD + +L G+GSGGY H+V ++A +QL E + +K LRN D +E
Sbjct: 294 LDSMFSSVCGDELLSHAGSGSGGYLHHVFTYAAKQLFGEEVKELTYKTLRNKDFQEVRLE 353
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G+V L F GFRNIQNL+QKLKR + Y F+E+MACPSGCLNGG QI+ + K
Sbjct: 354 KDGEVLLCFAATYGFRNIQNLVQKLKRGKSLYHFVEVMACPSGCLNGGGQIKAAAGQNQK 413
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E ++E + + P ++ + +Y+ WL G D+ + +L T YH + K L +
Sbjct: 414 ELLQKVEELYKEERPLLPEDDTRVAEIYQTWLHGVGEDRARELLRTQYHAVEKMTNGLTI 473
Query: 476 KW 477
KW
Sbjct: 474 KW 475
>gi|260801253|ref|XP_002595510.1| hypothetical protein BRAFLDRAFT_118961 [Branchiostoma floridae]
gi|229280757|gb|EEN51522.1| hypothetical protein BRAFLDRAFT_118961 [Branchiostoma floridae]
Length = 479
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/482 (48%), Positives = 314/482 (65%), Gaps = 11/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S+FSGVLQLTDLDDFI PSQECIKP+ +EK +G KI+I +DG+Y+Q G E K
Sbjct: 2 ASKFSGVLQLTDLDDFITPSQECIKPVKVEKTAGEV--GKIKIHNDGSYVQVAQTGEEVK 59
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENN-AHKASSNENTKTIVLSL 120
L+K +I+L DCLACSGCITSAE+VLITQQS +E+ +V+++N A + K +V+S+
Sbjct: 60 LQKAKITLNDCLACSGCITSAEAVLITQQSQDELYRVLQQNKEAAQDGEISQEKLVVISI 119
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF--- 177
+ Q SL A+++LS + KL GFFK+LG V D FSL E + EF+ RF
Sbjct: 120 SPQSRTSLAARYSLSSLETARKLTGFFKQLGAHYVFDTTFTRDFSLQESQREFVQRFQGN 179
Query: 178 -LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
S P+ S CPGW+CYAEK+HGE++LPYIS KSPQQVMGSL+K H +++ G P
Sbjct: 180 DASAPLPMLASACPGWICYAEKTHGEYVLPYISTTKSPQQVMGSLVKDHFSKQQGKPPDQ 239
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPC+DKKLEASR DFYN+ RDVDCVIT+ E+E +L E +L +
Sbjct: 240 IYHVTVMPCFDKKLEASREDFYNDVYRTRDVDCVITSGEVEAMLEKE--GISLVDVTPAD 297
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + + +L +G GSGGY ++ +A R+L + V +K LRN D +E T
Sbjct: 298 LDTMFSSMSGAELLSHSGGGSGGYLEHIFRYAARELFEQDVQSVNYKTLRNKDFKEVTLE 357
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L+F +A GFRNIQN++QK+KR + PY F+E+MACPSGCLNGG Q+R + K
Sbjct: 358 VEGKVVLKFALAYGFRNIQNMVQKIKRGKSPYHFVEVMACPSGCLNGGGQVRIGDKEADK 417
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
+ + E + L P +N LE LY WL G+ +K + ML+T+YH + K AL +
Sbjct: 418 DLLTKAEELYLALPVRTPEKNPRLESLYSEWLSGRDNEKARRMLHTTYHPVEKMTNALAI 477
Query: 476 KW 477
KW
Sbjct: 478 KW 479
>gi|217035123|ref|NP_001074460.2| cytosolic Fe-S cluster assembly factor narfl [Danio rerio]
Length = 477
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/482 (48%), Positives = 313/482 (64%), Gaps = 13/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSGVLQLTDLDDFI PSQEC+KP+ +EK G R+ AKI+I+DDG+Y Q +G+ +K
Sbjct: 2 ASHFSGVLQLTDLDDFITPSQECVKPVKVEKKQG-RSVAKIQIEDDGSYFQVHQDGQRQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +I+L DCLACSGCITSAESVLITQQSHEE+ +V+R N K S+ K +V+S++
Sbjct: 61 LEKAKITLNDCLACSGCITSAESVLITQQSHEELYRVLRHN---KQVSSTEQKVVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A + + +V KL F K LGV V D + FSL+E + EFL RF
Sbjct: 118 PQSRASLAAHYGIGSSEVARKLTSFLKHLGVHHVFDTAFSRSFSLIESQREFLQRFSQRE 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HGEFILPYIS +SPQQ+MGSL+K + A + GV P
Sbjct: 178 ADKKALPMLASACPGWICYAEKTHGEFILPYISTTRSPQQIMGSLVKGYFASQKGVSPQM 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DFY E R+VDCVIT+ E+ +L E +L++ +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFYLSEHETREVDCVITSGEVLKMLEEE--KVSLRDVQPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF- 355
LD + +L G+GSGGY H++ HA +QL + + +K ++N D +E T
Sbjct: 296 LDTMFSNVCGEELLGHAGSGSGGYLHHIYKHAAKQLFGVDVDELTYKTMKNKDFQEVTLE 355
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L+F GFRNIQNL+QKLKR + PY F+E+MACPSGCLNGG Q++ S K
Sbjct: 356 KDGQVLLKFAAVYGFRNIQNLVQKLKRGKSPYHFVEVMACPSGCLNGGGQLKPSADQSNK 415
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E ++E + S P +++ + LY++WL +K + +L+T YH + K L++
Sbjct: 416 ELLQQVEEVYRSEHPSVPEDDSQVAELYQSWLESVGEEKARQLLHTQYHAVEKTANGLSI 475
Query: 476 KW 477
KW
Sbjct: 476 KW 477
>gi|432868378|ref|XP_004071508.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
isoform 2 [Oryzias latipes]
Length = 482
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/484 (47%), Positives = 314/484 (64%), Gaps = 12/484 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSGVLQLTDLDDFI PSQEC+KPI +EK G ++ A+I+I+DDG+Y+Q +G +EK
Sbjct: 2 ASVFSGVLQLTDLDDFITPSQECVKPIKVEKKQG-KSVARIQIEDDGSYVQVNQDGGKEK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAH--KASSNENTKTIVLS 119
L+K +ISL DCLACSGCITSAESVLITQQS EE++KV+R N KT+V+S
Sbjct: 61 LEKAKISLNDCLACSGCITSAESVLITQQSPEELLKVLRNNKVECFAQFGAAEQKTVVVS 120
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
++ Q SL A F +S + +L F K LGV V D + FSL+E + EF++RF
Sbjct: 121 VSPQSRASLAAHFGISSSEAGRRLTSFLKNLGVHYVFDTSFSRTFSLLESQREFVERFQR 180
Query: 180 GGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
G P+ TS CPGW+CYAEK+HGE+ILPYIS +SPQQ+MGSL+K+H AEK G+ P
Sbjct: 181 KGQDNKALPMLTSACPGWICYAEKTHGEYILPYISTTRSPQQMMGSLVKSHFAEKQGLSP 240
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKD 294
IYHV +MPC+DKKLEASR+DF+ + R+VDCVIT+ E++ +L E +L + +
Sbjct: 241 QQIYHVAVMPCFDKKLEASRSDFFMNKAETREVDCVITSGEVQKML--EEHHISLNDVEP 298
Query: 295 GILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREAT 354
G LD + +L G+GSGGY H+V ++A +QL E + +K LRN D +E
Sbjct: 299 GTLDSMFSSVCGDELLSHAGSGSGGYLHHVFTYAAKQLFGEEVKELTYKTLRNKDFQEVR 358
Query: 355 F-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS 413
G+V L F GFRNIQNL+QKLKR + Y F+E+MACPSGCLNGG QI+ +
Sbjct: 359 LEKDGEVLLCFAATYGFRNIQNLVQKLKRGKSLYHFVEVMACPSGCLNGGGQIKAAAGQN 418
Query: 414 PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIAL 473
KE ++E + + P ++ + +Y+ WL G D+ + +L T YH + K L
Sbjct: 419 QKELLQKVEELYKEERPLLPEDDTRVAEIYQTWLHGVGEDRARELLRTQYHAVEKMTNGL 478
Query: 474 NVKW 477
+KW
Sbjct: 479 TIKW 482
>gi|348537868|ref|XP_003456415.1| PREDICTED: cytosolic Fe-S cluster assembly factor narfl-like
isoform 1 [Oreochromis niloticus]
Length = 477
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/486 (48%), Positives = 318/486 (65%), Gaps = 21/486 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSGVLQLTDLDDFI PSQEC+KP+ +EK G ++ AKI+I+DDG+Y+Q +G ++K
Sbjct: 2 ASHFSGVLQLTDLDDFITPSQECVKPVKVEKKQG-KSVAKIQIEDDGSYVQVNKDGGKQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +I+L DCLACSGCITSAESVLITQQSHEE+ KV+R N K ++ KT+V+S++
Sbjct: 61 LEKAKITLNDCLACSGCITSAESVLITQQSHEELFKVLRRN---KVANETEQKTVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL--- 178
Q SL A + LS + +L FFK LGV V D + FSL+E + EF++RF
Sbjct: 118 PQARASLAAHYNLSSSEAGRRLTSFFKGLGVHHVFDTSFSRTFSLLESQREFVERFQRKQ 177
Query: 179 --SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
S P+ TS CPGW+CYAEK+HGE+ILPYIS +SPQQ+MGSL+K++ A + G+ P
Sbjct: 178 QDSKALPMLTSACPGWICYAEKTHGEYILPYISTTRSPQQMMGSLVKSYFAGQQGLSPQQ 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHV +MPC+DKKLEASR+DFY R+VDCVIT+ E+ +L E +L + +
Sbjct: 238 IYHVAVMPCFDKKLEASRSDFYLTNAETREVDCVITSGEVLKMLEEE--NVSLNDLESAA 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF- 355
D + L G+GSGGY H+V ++A + L E + +K LRN D +E +
Sbjct: 296 PDTMFSSFCGDEFLSHAGSGSGGYLHHVFTYAAKHLFGEEVKNLTYKTLRNKDFQEVSLE 355
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F A GFRNIQNL+QKLKR + PY F+E+MACPSGCLNGG Q++ + K
Sbjct: 356 KDGVVLLCFASAYGFRNIQNLVQKLKRGKSPYHFVEVMACPSGCLNGGGQVKPSTGQNQK 415
Query: 416 ETALELETILCDLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
E ++E DL K+E P ++A + LY++WL ++ K +L+T YH + K
Sbjct: 416 ELLQKVE----DLYKAERPLLPEDDARVAELYQSWLNSVGDERAKELLHTQYHTVEKMTN 471
Query: 472 ALNVKW 477
L +KW
Sbjct: 472 GLTMKW 477
>gi|61557212|ref|NP_001013201.1| cytosolic Fe-S cluster assembly factor NARFL [Rattus norvegicus]
gi|81882576|sp|Q5BK18.1|NARFL_RAT RecName: Full=Cytosolic Fe-S cluster assembly factor NARFL;
AltName: Full=Iron-only hydrogenase-like protein 1;
Short=IOP1; AltName: Full=Nuclear prelamin A recognition
factor-like protein
gi|60688432|gb|AAH91240.1| Nuclear prelamin A recognition factor-like [Rattus norvegicus]
gi|149052134|gb|EDM03951.1| nuclear prelamin A recognition factor-like [Rattus norvegicus]
Length = 476
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/485 (47%), Positives = 310/485 (63%), Gaps = 20/485 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ CIKP+ + K G AKI I+DDG+Y Q +GR +K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQSCIKPVTVAKKPGSGI-AKIHIEDDGSYFQVNPDGRSQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGC+TSAE++LITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCVTSAETILITQQSHEELRKVL---DANKVAAPGQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L KL FFK++GV V D A FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLDSTDTARKLTSFFKKIGVHFVFDTAFARNFSLLESQKEFVQRFREQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FILPYIS +SPQQVMGSLIK A++ + P
Sbjct: 178 NSREALPMLASACPGWICYAEKTHGNFILPYISTARSPQQVMGSLIKDFFAQQQLLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK--D 294
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E + + E D
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEYQTRDVDCVLTTGEVFRLLEEEGVSLSELEPVPLD 297
Query: 295 GIL-DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
G+ +E HR G GSGGY +V HA ++L V ++P+RN D +E
Sbjct: 298 GLTRSVSAEEPTSHR-----GGGSGGYLEHVFRHAAQELFGIHVADVTYQPMRNKDFQEV 352
Query: 354 TFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
T G V LRF +A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 353 TLEREGQVLLRFAVAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLKAPDTE 412
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIA 472
+E ++E + + P + ++ LY+ WL G+ +++ H+L+T YH + K N
Sbjct: 413 G-RELLQQVERLYSMVRTEAPEDAPGVQELYQHWLQGEDSERASHLLHTQYHAVEKINSG 471
Query: 473 LNVKW 477
L+++W
Sbjct: 472 LSIRW 476
>gi|118097948|ref|XP_414836.2| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL [Gallus
gallus]
Length = 476
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/482 (49%), Positives = 312/482 (64%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQET-NGREEK 61
+S FSGVLQLTDLDD+IGPSQECIKP+ +EK G + AKI+I+ DG+Y Q T +G +K
Sbjct: 2 ASPFSGVLQLTDLDDYIGPSQECIKPVKVEKKPG-KAAAKIKIEADGSYFQITQDGEAQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +I+L DCLACSGCITSAESVLITQQSHEE K + N K ++ K +V+S++
Sbjct: 61 LEKAKITLNDCLACSGCITSAESVLITQQSHEEFYKTLAFN---KTAAPSEQKLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL AK +S + KL F K GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAAKCKMSVLETAKKLTAFLKSQGVHYVFDTTFSRNFSLLESQKEFVKRFRKQS 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FI+PYIS KSPQQ+MGSLIK H AE+ + P+
Sbjct: 178 EDKKALPMLASACPGWICYAEKTHGSFIIPYISTTKSPQQIMGSLIKGHFAEQQHLTPNK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCVIT E+ LL E +L +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEYQTRDVDCVITTGEVLKLLEQE--RVSLSDVDPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + + +G GSGGY ++ +A ++L E +++KPL+N D +E T
Sbjct: 296 LDTMFSSATEEELTGHSGGGSGGYLEHIYKYAAKELFGIEVDTIQYKPLKNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L+F +A GFRNIQNL+QKLKR + PY ++E+MACPSGCLNGG QI+ E +S K
Sbjct: 356 KDGVVLLQFALAYGFRNIQNLVQKLKRGKSPYHYVEVMACPSGCLNGGGQIKVESESS-K 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
+ ++E + L P EN T+ LY+ WLGG ++K + L+T YH + K + N+
Sbjct: 415 DWLQQVEKLYESLKTETPEENWTVTALYEQWLGGPESEKARKALHTEYHAVEKASAGFNI 474
Query: 476 KW 477
KW
Sbjct: 475 KW 476
>gi|354478815|ref|XP_003501610.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
[Cricetulus griseus]
gi|344248282|gb|EGW04386.1| Cytosolic Fe-S cluster assembly factor NARFL [Cricetulus griseus]
Length = 476
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/486 (46%), Positives = 314/486 (64%), Gaps = 22/486 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSGVLQLTDLDDFIGPSQ CIKP+ ++K G AKI I+DDG+Y+Q +GR +K
Sbjct: 2 ASPFSGVLQLTDLDDFIGPSQNCIKPVKVDKKPGSGI-AKIHIEDDGSYLQVNPDGRTQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGC+TSAE+VLITQQSHEE+ +V+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCVTSAETVLITQQSHEELKRVL---DANKVAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L KL FFK++GV V D A FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLDSSNTARKLTSFFKKIGVHFVFDTTFARNFSLLESQKEFVQRFRGQS 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FILPYIS +SPQQVMGSL+K A++ + P
Sbjct: 178 NSKEALPMLASACPGWICYAEKTHGNFILPYISTARSPQQVMGSLVKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK--- 293
IYHVT+MPCYDKKLEASR DF+N++ RDVDCV+T E+ +L E + L+ E
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQKYQTRDVDCVLTTGEVFRMLEEE-GVSLLELEPVPL 296
Query: 294 DGIL-DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE 352
DG+ +E HR G GSGGY +V HA ++L V ++P+RN D +E
Sbjct: 297 DGLTCSVSAEEPTSHR-----GGGSGGYLEHVFRHAAQELFGIHVADVTYQPMRNKDFQE 351
Query: 353 ATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
T G V LRF +A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG Q++ +
Sbjct: 352 VTLEREGQVLLRFAVAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLKAPDM 411
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
+E ++E + + P + ++ LY+ WL G+ +++ +L+T YH + K N
Sbjct: 412 QG-RELLQQVEKLYSMVRNEAPEDAPGVQELYQHWLQGEGSEQASRLLHTQYHAVEKTNS 470
Query: 472 ALNVKW 477
++++W
Sbjct: 471 GISIRW 476
>gi|116007468|ref|NP_001036430.1| CG17683, isoform C [Drosophila melanogaster]
gi|51951088|gb|EAL24590.1| CG17683, isoform C [Drosophila melanogaster]
gi|323301260|gb|ADX35972.1| RE10877p [Drosophila melanogaster]
Length = 473
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/481 (49%), Positives = 320/481 (66%), Gaps = 16/481 (3%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SR S LQLTD+DDFI PSQ P+ I+K +TGAKI+I+ DG + +E+ KL
Sbjct: 2 SRLSRALQLTDIDDFITPSQ----PVQIDKARS-KTGAKIKIKGDGCF-EESESGNLKLN 55
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KV+ISL DCLACSGCITSAE VLITQQS EE++KV++EN+ +KAS + +N +TIV +LA
Sbjct: 56 KVDISLQDCLACSGCITSAEEVLITQQSREELLKVLQENSKNKASEDWDNVRTIVFTLAT 115
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ + E L G+F+ LG D VL +A +L+E EF+DR+
Sbjct: 116 QPILSLAYRYQIGVEDAARHLNGYFRSLGADYVLSTKVADDIALLECRQEFVDRYRENEN 175
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG F+LPY+S +SPQQ+MG L+K LA+K+ V S IYHVT
Sbjct: 176 LTMLSSSCPGWVCYAEKTHGNFLLPYVSTTRSPQQIMGVLVKQILADKMNVPASRIYHVT 235
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DF+++ RDVDCVIT+VE+E LL+ A L + LDWPW
Sbjct: 236 VMPCYDKKLEASREDFFSKANNSRDVDCVITSVEVEQLLSE--AQQPLSQYDLLDLDWPW 293
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPDIREATF-TCG 358
P M+ + T SGGYA ++ +A + + + +EFK L+N D RE G
Sbjct: 294 SNVRPEFMVWAHEKTLSGGYAEHIFKYAAKHIFNEDLKTELEFKQLKNRDFREIILKQNG 353
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
L+F IANGFRNIQNL+QKLKR+++ Y F+E+MACPSGC+NGGAQIR +E
Sbjct: 354 KTVLKFAIANGFRNIQNLVQKLKREKVSNYHFVEVMACPSGCINGGAQIRPTTGQHVREL 413
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN-NIALNVK 476
+LE + +L +SEP EN+ +H+Y +L G +DK +L+T YH++ +I+LN+
Sbjct: 414 TRKLEELYQNLPRSEP-ENSLTKHIYNDFLDGFQSDKSYDVLHTRYHDVVSELSISLNIN 472
Query: 477 W 477
W
Sbjct: 473 W 473
>gi|449281351|gb|EMC88431.1| Cytosolic Fe-S cluster assembly factor NARFL [Columba livia]
Length = 478
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/484 (49%), Positives = 311/484 (64%), Gaps = 16/484 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSGVLQL DLDDFIGP+QECIKP+ +EK G + AKIRI+ DG+Y Q +G +K
Sbjct: 2 ASPFSGVLQLADLDDFIGPAQECIKPVKVEKKPG-KAAAKIRIEADGSYFQINQDGEAQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +I+L DCLACSGCITSAESVLITQQSHEE+ K++ N A+ NE K +V+S++
Sbjct: 61 LEKAKITLNDCLACSGCITSAESVLITQQSHEELCKMLTFNKT--AAPNEQ-KLVVISVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLG--VDLVLDVGIAHCFSLVELENEFLDRFLS 179
Q SL AK L ++ KL FFK LG V V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAAKCKLGVQETAQKLTAFFKSLGKCVHYVFDTTFSRNFSLLESQREFVKRFQK 177
Query: 180 GGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
P+ S CPGW+CYAEK+HG FI+PYIS KSPQQVMGSLIK H AE+ + P
Sbjct: 178 QSEDKKALPMLASACPGWICYAEKTHGSFIIPYISTTKSPQQVMGSLIKGHFAEQQHLTP 237
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKD 294
IYHVT+MPCYDKKLEASR DF+N+E RDVDCVIT E+ LL E +L +
Sbjct: 238 DRIYHVTVMPCYDKKLEASRPDFFNQEYQTRDVDCVITTGEVLKLLEQE--GVSLSDVDP 295
Query: 295 GILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREAT 354
LD + + G GSGGY ++ +A ++L + +++KPL+N D +E T
Sbjct: 296 AALDTMFGSAAGEELTGHAGGGSGGYLEHIYKYAAKELFGIQVDTIQYKPLKNKDFQEVT 355
Query: 355 F-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS 413
G V L+F +A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG QI+ + +S
Sbjct: 356 LEKDGAVLLQFALAYGFRNIQNLVQKLKRGRSPYHYVEVMACPSGCLNGGGQIKLDGESS 415
Query: 414 PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIAL 473
KE ++E + L P EN ++ LY+ WLGG + K L+T YH + K +
Sbjct: 416 -KEQLQQVERLYESLQTEVPEENRAVQELYEQWLGGTGSGKAAEALHTGYHAVEKTSAGF 474
Query: 474 NVKW 477
N+KW
Sbjct: 475 NIKW 478
>gi|195357063|ref|XP_002044933.1| GM20417 [Drosophila sechellia]
gi|194124275|gb|EDW46318.1| GM20417 [Drosophila sechellia]
Length = 478
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/485 (48%), Positives = 320/485 (65%), Gaps = 19/485 (3%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAY----IQETNGRE 59
SR+S LQLTD+DDFI PSQ P+ I+K +TGAKI+I+ D + +
Sbjct: 2 SRWSTALQLTDIDDFITPSQ----PVQIDKARS-KTGAKIKIKGDSCFEESEMVSLQSGN 56
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVL 118
KL KV+ISL DCLACSGCITSAE VLITQQS EE++K+++EN+ +KAS + +N +TIV+
Sbjct: 57 LKLNKVDISLQDCLACSGCITSAEEVLITQQSQEELLKILQENSKNKASEDWDNVRTIVI 116
Query: 119 SLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL 178
+LA QP+LSL ++ + E L G+F+ LG D VL +A +L+E EF+DR+
Sbjct: 117 TLATQPLLSLAHRYQIGVEDAARHLNGYFRSLGADYVLSTKVADDIALLECRQEFVDRYR 176
Query: 179 SGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
+ +S CPGWVCYAEK+HG FILPY+S +SPQQ+MG L+K LA+K+ V S I
Sbjct: 177 ENENLTMLSSSCPGWVCYAEKTHGNFILPYVSTTRSPQQIMGVLVKQILADKINVPASRI 236
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL 297
YHVT+MPCYDKKLEASR DF+++ RDVDCVIT+VE+E LL+ A L + L
Sbjct: 237 YHVTVMPCYDKKLEASREDFFSKANNSRDVDCVITSVEVEQLLSE--AQRPLSQYDLFDL 294
Query: 298 DWPWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGE-SPVVEFKPLRNPDIREATF 355
DWPW P M+ + T SGGYA ++ A + + + + +EFK L+N D RE
Sbjct: 295 DWPWSNVRPEFMVWAHEKTQSGGYAEHIFKFAAKHIFNEDLTTELEFKQLKNRDFREIIL 354
Query: 356 -TCGDVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVAS 413
G L+F IANGFRNIQNL+QKLKR++L Y F+E+MACPSGC+NGGAQIR
Sbjct: 355 KQNGKTVLKFAIANGFRNIQNLVQKLKREKLSNYHFVEVMACPSGCINGGAQIRPTTGQH 414
Query: 414 PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN-NIA 472
+E +LE + +L +SEP EN+ +H+Y +L G TDK ML+T YH++ + +I+
Sbjct: 415 VRELTRKLEELYHNLPRSEP-ENSLTKHIYNDFLDGFQTDKSYEMLHTRYHDVVSDLSIS 473
Query: 473 LNVKW 477
LN+ W
Sbjct: 474 LNINW 478
>gi|348585433|ref|XP_003478476.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like [Cavia
porcellus]
Length = 476
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/482 (47%), Positives = 305/482 (63%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ+CIKP+ ++K G KI I+DDG+Y Q + +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQDCIKPVKVDKRPGSAV-TKIHIEDDGSYFQVDQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +SL DCLACSGC+TSAE+VLITQQSHEE+ KV+ N KA + + +VLS++
Sbjct: 61 LEKARVSLNDCLACSGCVTSAETVLITQQSHEELRKVLAAN---KAVPPDQQRLVVLSIS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F LS KL FFK++G V D + F+L+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLSPTDTAKKLTSFFKKIGAHFVFDTTFSRNFTLLESQREFIQRFREQT 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FILPYIS +SPQQVMGSL+K A++ + P
Sbjct: 178 DSRKALPVLASSCPGWICYAEKTHGSFILPYISTARSPQQVMGSLVKDFFAQQQNLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYH+T+MPCYDKKLEASR+DF+N+E RDVDCV+T E+ LL E +L E +
Sbjct: 238 IYHITVMPCYDKKLEASRSDFFNQEYQTRDVDCVLTTGEVFRLLEEE--GVSLPELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + + G GSGGY +V HA ++L V + P+RN D +E T
Sbjct: 296 LDSLTSTMSVEELTNHRGGGSGGYLEHVFRHAAQELFGIHVAEVTYTPVRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V LRF +A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG Q++ V K
Sbjct: 356 KEGQVLLRFAMAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLKATDVPG-K 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E ++E + + P + + LY+ WL G+ +++ H+L+T YH + K + LN+
Sbjct: 415 ELLQQVERLYSMIRVEAPEDAPGVRELYQHWLQGEGSEQASHLLHTQYHAVEKASSGLNI 474
Query: 476 KW 477
+W
Sbjct: 475 RW 476
>gi|326929056|ref|XP_003210687.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
[Meleagris gallopavo]
Length = 476
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/482 (49%), Positives = 311/482 (64%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQET-NGREEK 61
+S FSGVLQLTDLDD+IGPSQECIKP+ +EK G + AKI+I+ DG+Y Q T +G +K
Sbjct: 2 ASPFSGVLQLTDLDDYIGPSQECIKPVKVEKKPG-KAAAKIKIEADGSYFQITQDGGAQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +I+L DCLACSGCITSAESVLITQQSHEE K + N A+ NE K +V+S++
Sbjct: 61 LEKAKITLNDCLACSGCITSAESVLITQQSHEEFYKTLAFNKT--AAPNEQ-KLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL AK +S + KL F K GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAAKCKMSVLETAKKLTAFLKSQGVHYVFDTTFSRNFSLLESQKEFVKRFRKQS 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FI+PYIS KSPQQ+MGSLIK H AE+ + P+
Sbjct: 178 EDKKALPMLASACPGWICYAEKTHGSFIIPYISTTKSPQQIMGSLIKGHFAEQQHLPPNK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCVIT E+ LL E +L +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEYQTRDVDCVITTGEVLKLLEQE--KVSLSDVAPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD ++ + +G GSGGY ++ +A ++L E +++KPL+N D +E T
Sbjct: 296 LDTMFNSATEEELTGHSGGGSGGYLEHIYKYAAKELFGIEVDTIQYKPLKNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F +A GFRNIQNL+QKLKR + PY ++E+MACPSGCLNGG QI+ E S K
Sbjct: 356 KDGAVLLHFALAYGFRNIQNLVQKLKRGKSPYHYVEVMACPSGCLNGGGQIKVEGEPS-K 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
+ ++E + L P EN T+ LY+ WLGG ++K L+T YH + K + N+
Sbjct: 415 DWLQQVEKLYESLKTEIPEENRTVTALYEQWLGGTESEKAGKALHTEYHAVEKASAGFNI 474
Query: 476 KW 477
KW
Sbjct: 475 KW 476
>gi|344292240|ref|XP_003417836.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL [Loxodonta
africana]
Length = 476
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/485 (47%), Positives = 312/485 (64%), Gaps = 20/485 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGR-EEK 61
+S FSG LQLTDLDD+I PSQ+CIKPI ++K G AKI I+DDG+Y Q + R +K
Sbjct: 2 ASPFSGALQLTDLDDYIRPSQDCIKPIKVDKRLGSGV-AKIHIEDDGSYFQVSQARGTQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAESVLI QQSHEE+ K++ NA+K + + K +V+S++
Sbjct: 61 LEKAKISLNDCLACSGCVTSAESVLIIQQSHEELRKIL---NANKVAVPDQQKLVVISVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q V SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF S
Sbjct: 118 PQSVASLAARFQLNPTDTSRKLTSFFKKIGVHYVFDTAFSRNFSLLESQREFVQRFQSQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG F+LP++S V+SPQQVMG+L+K A++ + P
Sbjct: 178 NSGQALPVLASACPGWICYAEKTHGSFLLPHLSTVRSPQQVMGALVKDFFAQQQHLTPDR 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDG 295
+YHVT+MPCYDKKLEASR DF+N+E RDVDCVIT E+ LL E ++ L+
Sbjct: 238 LYHVTVMPCYDKKLEASRPDFFNQEFQTRDVDCVITTGEMFKLLEEEGVSFPDLEPAPLD 297
Query: 296 ILD--WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
+L +E HR G GSGGY +V HA +L V +KPLRN D +E
Sbjct: 298 VLSSCASAEEPTSHR-----GGGSGGYLEHVFRHAAWELFGIHVAEVTYKPLRNKDFQEV 352
Query: 354 TF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
T G V L F A GFRNIQNL+QKL+R R PY ++E+MACPSGCLNGG Q+R
Sbjct: 353 TLERDGQVLLHFATAYGFRNIQNLVQKLRRGRCPYHYVEVMACPSGCLNGGGQLRALDGR 412
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIA 472
S KE ++E + ++ EPR+ ++ LY+ WL G+ +++ H+L T YH + K +
Sbjct: 413 S-KELLQQVERLYGEVRTQEPRDVPGVQKLYRHWLQGEGSNRAGHLLYTQYHAVEKASFG 471
Query: 473 LNVKW 477
++KW
Sbjct: 472 FSIKW 476
>gi|403273198|ref|XP_003928407.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL [Saimiri
boliviensis boliviensis]
Length = 471
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 308/482 (63%), Gaps = 19/482 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDL+DFIGPSQECIKP+ +EK G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLNDFIGPSQECIKPVNVEKRLGSGV-AKIRIEDDGSYFQVNQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A++ ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCVTSAETVLITQQSHEELKKVL---DANRVAAPGQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRNFSLLESQREFVRRFRGQA 177
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ S CPGW+CYAEK+H FILP+IS +SPQQVMGSL+K A++ + P +YHVT
Sbjct: 178 LPVLASACPGWICYAEKTHSSFILPHISTARSPQQVMGSLVKDFFAQQQHLTPDKVYHVT 237
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD--- 298
+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + + LD
Sbjct: 238 VMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFKLLEEE--GVSLPDLEPAPLDSLC 295
Query: 299 --WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
+E HR G GSGGY +V HA R+L + V +KPLRN D +E T
Sbjct: 296 SGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIQVAEVTYKPLRNKDFQEVTLE 350
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++ S +
Sbjct: 351 KEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPDRPS-R 409
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E +E + + P + A ++ LY WL G T++ +L+T YH + K N L +
Sbjct: 410 ELLQHVERLYSMVRVEAPEDAAGVQELYTQWLQGTDTERAGRLLHTQYHAVEKANTGLGI 469
Query: 476 KW 477
+W
Sbjct: 470 RW 471
>gi|126335307|ref|XP_001365922.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL
[Monodelphis domestica]
Length = 476
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/482 (48%), Positives = 312/482 (64%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ+CIKP+ +EK G T AKI+I+DDG Y Q +G K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQDCIKPMKVEKKLGKGT-AKIQIEDDGTYFQVNQDGGSHK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGCITSAESVLITQQSHEE+ KV+ N +K++ K +V+S++
Sbjct: 61 LEKAKISLNDCLACSGCITSAESVLITQQSHEELDKVL---NFNKSAEPNQQKLVVISVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL--- 178
Q SL AKF L+ KL FFK GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAAKFQLTLLDTAKKLTAFFKNRGVHYVFDTTFSRNFSLLESQREFVQRFRRRT 177
Query: 179 --SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FI+PYIS KSPQQVMGSLIK H A++ + P
Sbjct: 178 ESKQALPMLASACPGWICYAEKTHGSFIIPYISTAKSPQQVMGSLIKDHFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR+DF+N++ RDVDCVIT E+ LL E +L +
Sbjct: 238 IYHVTVMPCYDKKLEASRSDFFNQQYQTRDVDCVITTGEILRLLEQE--GVSLSDVDPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF- 355
LD + + +L +G GSGGY ++ HA ++L + + +KPL+N D +E T
Sbjct: 296 LDAEFSSVSGEELLGHHGGGSGGYLEHIFRHAAQELFGMQVDEITYKPLKNKDFQEVTLE 355
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F +A GFRNIQNL+QKLKR + PY ++E+MACPSGCLNGG QI+ E ++S K
Sbjct: 356 KDGTVLLHFALAYGFRNIQNLVQKLKRGKSPYHYVEVMACPSGCLNGGGQIKAEAISS-K 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
+ ++E + + P + ++ LY+ WL G+ +++ L+T YH + K + N+
Sbjct: 415 DLLQQVEKLYEMVKIVVPDSSTEIKELYEQWLKGEDSEEAGKTLHTQYHAVEKMSTGFNI 474
Query: 476 KW 477
KW
Sbjct: 475 KW 476
>gi|380815604|gb|AFE79676.1| cytosolic Fe-S cluster assembly factor NARFL [Macaca mulatta]
gi|383420789|gb|AFH33608.1| cytosolic Fe-S cluster assembly factor NARFL [Macaca mulatta]
Length = 476
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/487 (48%), Positives = 307/487 (63%), Gaps = 24/487 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRPGSGV-AKIRIEDDGSYFQVNQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL S CPGW+CYAEK+HG FILPYIS +SPQQVMGSL+K A++ + P
Sbjct: 178 DCRQALPLLASACPGWICYAEKTHGSFILPYISTARSPQQVMGSLVKDFFAQQQRLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--DVSLPDLEPAP 295
Query: 297 LD-----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
LD +E HR G GSGGY +V HA R+L V +KPLRN D +
Sbjct: 296 LDSLCSGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQ 350
Query: 352 EATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
E T G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++ +
Sbjct: 351 EVTLEKEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPE 410
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
S +E +E + + P + ++ LY WL G ++ +L+T YH + K N
Sbjct: 411 RPS-RELLQHVERLYGMVRAEMPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKAN 469
Query: 471 IALNVKW 477
L ++W
Sbjct: 470 TGLGIRW 476
>gi|390345777|ref|XP_788197.3| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL
[Strongylocentrotus purpuratus]
Length = 478
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/481 (47%), Positives = 317/481 (65%), Gaps = 11/481 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEKL 62
+ FSG L+L DLDDFI PSQECIKP+ +EK +G + GA IRI+DDG+Y Q + G KL
Sbjct: 2 AHFSGALKLADLDDFITPSQECIKPVKMEKVAG-KPGA-IRIEDDGSYFQLDDYGGSRKL 59
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTK-TIVLSLA 121
+K +I+L DCLACSGCITSAESVLITQQS EE+ +V+ EN A+ + + T++++++
Sbjct: 60 EKAKITLNDCLACSGCITSAESVLITQQSQEELFRVLEENRKLAANGEVSKQMTVIVTIS 119
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---- 177
Q SL AK+ LS +L FF+ LGV V D + FSL+E + EF+ RF
Sbjct: 120 PQSRASLAAKYKLSLPDTAKRLTTFFRELGVHHVFDETFSRDFSLLESQREFIQRFNNQA 179
Query: 178 LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
G P+ S CPGWVCYAEK+HG +ILPYIS KSPQQ++GSL+K ++A+ L V P I
Sbjct: 180 TKGSLPMLASACPGWVCYAEKTHGSYILPYISTTKSPQQIIGSLVKDYVAQSLRVKPDCI 239
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL 297
YHVT+MPCYDKKLEASR DFY++ RDVDCVIT+ E+E +LA E + + E ++
Sbjct: 240 YHVTVMPCYDKKLEASRDDFYDDVYRTRDVDCVITSGEVEAMLAKEQVSLSEIEPQEYNR 299
Query: 298 DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC 357
+P+ E + G+G ++L HA ++L E +++K ++N D +E T
Sbjct: 300 VFPFGESSSVVSHSGGGSGGF--HEHILRHAAKELFGKELGELQYKVMKNKDFKEVTVES 357
Query: 358 -GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G LRF +A GFRNIQNL+QK+KR + PY F+E+MACP+GC+NGG QI+ E+ + KE
Sbjct: 358 DGQPLLRFALAYGFRNIQNLVQKIKRGKSPYHFVEVMACPAGCVNGGGQIKAEEGITAKE 417
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVK 476
+E+E + P EN ++ LY+ WLGG ++K + ML+T YH + KN ALN+K
Sbjct: 418 LLVEVEELYNSAPTRTPEENEVVQTLYEEWLGGVGSEKARTMLHTQYHALEKNTNALNIK 477
Query: 477 W 477
W
Sbjct: 478 W 478
>gi|325301271|ref|NP_001191684.1| cytosolic Fe-S cluster assembly factor NARFL [Macaca mulatta]
Length = 476
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/487 (48%), Positives = 306/487 (62%), Gaps = 24/487 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRPGSGV-AKIRIEDDGSYFQVNQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL S CPGW+CYAEK+HG FILPYIS +SPQQVMGSL+K A++ + P
Sbjct: 178 DCRQALPLLASACPGWICYAEKTHGSFILPYISTARSPQQVMGSLVKDFFAQQQRLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--DVSLPDLEPAP 295
Query: 297 LD-----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
LD +E HR G GSGGY +V HA R+L V +KPLRN D +
Sbjct: 296 LDSLCSGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQ 350
Query: 352 EATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
E T G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 351 EVTLEKEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPD 410
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
S +E +E + + P + ++ LY WL G ++ +L+T YH + K N
Sbjct: 411 RPS-RELLQHVERLYGMVRAEMPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKAN 469
Query: 471 IALNVKW 477
L ++W
Sbjct: 470 TGLGIRW 476
>gi|355709814|gb|EHH31278.1| Nuclear prelamin A recognition factor-like protein [Macaca mulatta]
Length = 476
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/487 (47%), Positives = 306/487 (62%), Gaps = 24/487 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRPGSGV-AKIRIEDDGSYFQVNQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL S CPGW+CYAEK+HG FILPYIS +SPQQVMGSL+K A++ + P
Sbjct: 178 DCRQALPLLASACPGWICYAEKTHGSFILPYISTARSPQQVMGSLVKDFFAQQQRLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYH+T+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + +
Sbjct: 238 IYHITVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--DVSLPDLEPAP 295
Query: 297 LD-----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
LD +E HR G GSGGY +V HA R+L V +KPLRN D +
Sbjct: 296 LDSLCSGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQ 350
Query: 352 EATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
E T G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 351 EVTLEKEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPD 410
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
S +E +E + + P + ++ LY WL G ++ +L+T YH + K N
Sbjct: 411 RPS-RELLQHVERLYGMVRAEMPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKAN 469
Query: 471 IALNVKW 477
L ++W
Sbjct: 470 TGLGIRW 476
>gi|194877439|ref|XP_001973881.1| GG21400 [Drosophila erecta]
gi|259511278|sp|B3NKH7.1|NARF_DROER RecName: Full=Probable cytosolic Fe-S cluster assembly factor
GG21400
gi|190657068|gb|EDV54281.1| GG21400 [Drosophila erecta]
Length = 477
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/482 (48%), Positives = 317/482 (65%), Gaps = 14/482 (2%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
S S LQLTD+DDFI PSQ CIKP+ I+K + +TGAKI I+DD + + +G++ KL
Sbjct: 2 SGLSRALQLTDIDDFITPSQMCIKPVKIDK-AKSKTGAKIMIKDDSCFEESESGKK-KLN 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KVEI+L DCLACSGCITSAE VLITQQS EE+++V++EN KA+ + N +TIV ++A
Sbjct: 60 KVEITLQDCLACSGCITSAEGVLITQQSQEELLRVLQENLTKKATEDWGNVRTIVFTIAT 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ + E L G+F+ LG D VL +A +L+E EF++R+
Sbjct: 120 QPLLSLAHRYQIGVEDSARHLAGYFRSLGADYVLSTKVADDIALLECRQEFVERYRENEN 179
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG FILPYIS +SPQQ+MG L+K AEKL V S IYHVT
Sbjct: 180 LTMLSSSCPGWVCYAEKTHGNFILPYISTTRSPQQIMGVLVKHVFAEKLNVPASQIYHVT 239
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPCYDKKLEASR DF++ RDVDCVIT+VE+E LL+ T + D LDWPW
Sbjct: 240 VMPCYDKKLEASREDFFSTANNSRDVDCVITSVEVEQLLSESQRTLAQYDPVD--LDWPW 297
Query: 302 DEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPV--VEFKPLRNPDIREATF-TC 357
P M+ + T SGGYA ++ A ++L E P +EFK L+N D RE
Sbjct: 298 SNVPPDFMVWAHEKTLSGGYAEHIFKFAAKELF-NEVPRSELEFKQLKNRDFREIILKKN 356
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G+ L+F IANGFRNIQNL+ KLKR ++ Y F+E+MACPSGC+NGGAQIR +E
Sbjct: 357 GNTVLKFAIANGFRNIQNLVHKLKRGKVSNYHFVEVMACPSGCINGGAQIRPTTGQHVRE 416
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN-NIALNV 475
+LE + +L +S+P EN+ + +Y +L G T+K +L+T YH++ + +LN+
Sbjct: 417 LTRKLEELYHNLPQSDP-ENSLTKLIYTDFLDGFQTEKSYELLHTRYHDVVSELSKSLNI 475
Query: 476 KW 477
W
Sbjct: 476 NW 477
>gi|351711193|gb|EHB14112.1| Cytosolic Fe-S cluster assembly factor NARFL [Heterocephalus
glaber]
Length = 476
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/482 (47%), Positives = 313/482 (64%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ+CIKP+ ++K G T AKI+I+DDG+Y Q + +G +
Sbjct: 2 ASLFSGALQLTDLDDFIGPSQDCIKPVKVDKRPGS-TVAKIQIEDDGSYFQVDQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A+K + + +VLS++
Sbjct: 61 LEKAKVSLNDCLACSGCVTSAETVLITQQSHEELRKVL---DANKTVPPDQQQLVVLSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F LS KL FFK++G V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLSPTDTARKLTSFFKKIGAHFVFDTTFSRNFSLIESQREFVQRFRGQT 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FILPYIS +SPQQVMG+LIK A++ + P
Sbjct: 178 DSRKALPVLASACPGWICYAEKTHGSFILPYISTARSPQQVMGALIKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYH+T+MPCYDKKLEASR+DF+N+E RDVDCV+T E+ LL E +L E +
Sbjct: 238 IYHITVMPCYDKKLEASRSDFFNQEYQTRDVDCVLTTGEVFRLLEEE--GVSLAELESAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + + G GSGGY +V HA ++L V ++PLRN D +E T
Sbjct: 296 LDSLTSSMSAEELTGHRGGGSGGYLEHVFRHAAQELFGIHVAEVTYRPLRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V LRF +A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG Q++ V +
Sbjct: 356 REGQVLLRFAMAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLKAPDVPG-R 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E ++E + + + P + + LY+ WL G+ +++ +H+L+T YH + K + L++
Sbjct: 415 ELLQQVERLYSIIREEAPEDAPGIWELYQHWLQGEGSEQARHLLHTQYHAVEKASSGLSI 474
Query: 476 KW 477
+W
Sbjct: 475 RW 476
>gi|432098945|gb|ELK28435.1| Cytosolic Fe-S cluster assembly factor NARFL [Myotis davidii]
Length = 476
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 306/482 (63%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ+CIKP+ ++K G R AKI I+DDG Y Q +G K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQDCIKPMKVDKKLG-RGVAKIHIEDDGTYFQVSQDGGTRK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ K++ +A+K ++ K +V+S++
Sbjct: 61 LEKAKISLDDCLACSGCVTSAETVLITQQSHEELRKIL---DANKTAAPGQQKLVVISVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK+LG V D + FSL+E + EF+ RF
Sbjct: 118 PQSSASLAARFQLNPTDTAKKLTAFFKKLGAHYVFDTAFSRNFSLLESQREFVQRFREQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG I+PYIS +SPQQVMGSL+K A++ V P
Sbjct: 178 SSKQTLPMLASACPGWICYAEKTHGSTIIPYISTARSPQQVMGSLVKDFFAQQQHVTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
I+HVT+MPCYDKKLEASR DF+++E RDVDCVIT E+ LL E +L E +
Sbjct: 238 IHHVTVMPCYDKKLEASRPDFFSQEYQTRDVDCVITTGEVFKLLEEE--GVSLSELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + + G GSGGY +V HA ++L V +KPLRN D +E T
Sbjct: 296 LDSVFGSVSVQEPTSHRGGGSGGYLEHVFRHAAQELFGIHVDEVTYKPLRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG Q++ ++ K
Sbjct: 356 SEGRVLLHFAAAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLKAPEIPG-K 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E +E + + P + ++ LY+ WL GK +++ +L+TSYH + K + L++
Sbjct: 415 ELLQHVERLYSMVRTEAPEDVPGVQELYEHWLHGKDSERASCLLHTSYHAVEKASSGLSI 474
Query: 476 KW 477
+W
Sbjct: 475 RW 476
>gi|11968051|ref|NP_071938.1| cytosolic Fe-S cluster assembly factor NARFL [Homo sapiens]
gi|74733617|sp|Q9H6Q4.1|NARFL_HUMAN RecName: Full=Cytosolic Fe-S cluster assembly factor NARFL;
AltName: Full=Iron-only hydrogenase-like protein 1;
Short=IOP1; AltName: Full=Nuclear prelamin A recognition
factor-like protein; AltName: Full=Protein related to
Narf
gi|10438222|dbj|BAB15199.1| unnamed protein product [Homo sapiens]
gi|20988037|gb|AAH30248.1| Nuclear prelamin A recognition factor-like [Homo sapiens]
gi|22654872|gb|AAM98737.1| protein related to Narf [Homo sapiens]
gi|119606128|gb|EAW85722.1| nuclear prelamin A recognition factor-like, isoform CRA_a [Homo
sapiens]
Length = 476
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/487 (47%), Positives = 307/487 (63%), Gaps = 24/487 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK +G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRAGSGV-AKIRIEDDGSYFQINQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DCRQALPLLASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLVKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--GVSLPDLEPAP 295
Query: 297 LD-----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
LD +E HR G GSGGY +V HA R+L V +KPLRN D +
Sbjct: 296 LDSLCSGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQ 350
Query: 352 EATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
E T G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 351 EVTLEKEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPD 410
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
S +E +E + + P + ++ LY WL G ++ +L+T YH + K +
Sbjct: 411 RPS-RELLQHVERLYGMVRAEAPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKAS 469
Query: 471 IALNVKW 477
L ++W
Sbjct: 470 TGLGIRW 476
>gi|402907164|ref|XP_003916348.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL [Papio
anubis]
Length = 476
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/487 (47%), Positives = 305/487 (62%), Gaps = 24/487 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRPGSGV-AKIRIEDDGSYFQVNQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K + + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMAVPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DCRQALPLLASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLVKDFFAQQQRLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--GVSLPDLEPAP 295
Query: 297 LD-----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
LD +E HR G GSGGY +V HA R+L V +KPLRN D +
Sbjct: 296 LDSLCSGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQ 350
Query: 352 EATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
E T G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 351 EVTLEKEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPD 410
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
S +E +E + + P + ++ LY WL G ++ +L+T YH + K N
Sbjct: 411 RPS-RELLQHVERLYGMVRAEMPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKAN 469
Query: 471 IALNVKW 477
L ++W
Sbjct: 470 TGLGIRW 476
>gi|395515647|ref|XP_003762012.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL
[Sarcophilus harrisii]
Length = 476
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/482 (48%), Positives = 306/482 (63%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ+CIKP+ +EK G T AKI+I+DDG Y Q +G K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQDCIKPMKVEKKLGKGT-AKIQIEDDGTYFQVNQDGGSRK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGCITSAESVLITQQSHEE+ K++ N +K + K +V+S++
Sbjct: 61 LEKAKISLNDCLACSGCITSAESVLITQQSHEELYKIL---NFNKIAEPSQQKLVVISVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL--- 178
Q SL A+F L+ KL FFK GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLTPLDTAKKLTAFFKNRGVHYVFDTAFSRNFSLLESQREFVQRFRRRT 177
Query: 179 --SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FI+PYIS KSPQQVMGSLIK H A+K + P
Sbjct: 178 ESKQALPMLASACPGWICYAEKTHGSFIIPYISTAKSPQQVMGSLIKDHFAKKQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCVIT E+ LL E +L +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEYQTRDVDCVITTGEILRLLEQE--GISLSDVDPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF- 355
LD + + + G GSGGY ++ +A ++L + +KPL+N D +E
Sbjct: 296 LDAEFSFVSGEELFGHRGGGSGGYLEHIFRYAAQELFGIHVDGITYKPLKNKDFQEVMLE 355
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F +A GFRNIQNL+QKLK+ + PY ++E+MACPSGCLNGG QI+ E V+S K
Sbjct: 356 KDGTVLLHFALAYGFRNIQNLVQKLKKGKSPYHYVEVMACPSGCLNGGGQIKAEAVSS-K 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
+ ++E + + P + ++ LY+ WL GK +++ L+T YH + K N N+
Sbjct: 415 DLLQQVEKLYEMVRTVMPETSPEIKELYEQWLKGKDSEEAGTTLHTQYHAVEKMNTGFNI 474
Query: 476 KW 477
KW
Sbjct: 475 KW 476
>gi|355756418|gb|EHH60026.1| Nuclear prelamin A recognition factor-like protein [Macaca
fascicularis]
Length = 476
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/487 (47%), Positives = 306/487 (62%), Gaps = 24/487 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRPGSGV-AKIRIEDDGSYFQVNQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DCRQALPLLASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLVKDFFAQQQRLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--DVSLPDLEPAP 295
Query: 297 LD-----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
LD +E HR G GSGGY +V HA R+L V +KPLRN D +
Sbjct: 296 LDSLCSGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQ 350
Query: 352 EATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
E T G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 351 EVTLEKEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPD 410
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
S +E +E + + P + ++ LY WL G ++ +L+T YH + K +
Sbjct: 411 RPS-RELLQHVERLYGMVRAEMPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKAS 469
Query: 471 IALNVKW 477
L ++W
Sbjct: 470 TGLGIRW 476
>gi|301769629|ref|XP_002920216.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
[Ailuropoda melanoleuca]
Length = 476
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/483 (46%), Positives = 313/483 (64%), Gaps = 16/483 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ+CIKP+ ++K G AKI I+DDG+Y Q +G +K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQDCIKPMRVDKKPGSGV-AKIHIEDDGSYFQVSQDGGTQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKISLDDCLACSGCVTSAETVLITQQSHEELRKVL---DANKTAAPGQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL +F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLATRFQLTPTDTAKKLTAFFKKIGVHYVFDTAFSRNFSLLESQREFVQRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ TS CPGW+CYAEK+HG F++PY+S +SPQQVMGSL+K A++ + P
Sbjct: 178 NSTQALPVLTSACPGWICYAEKTHGSFLIPYLSTARSPQQVMGSLVKDFFAQQQRLTPDR 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR+DF+++E RDVDCV+T E+ LL E +L E +
Sbjct: 238 IYHVTVMPCYDKKLEASRSDFFSQEHQTRDVDCVVTTGEVFKLLEEE--GVSLLELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + + G GSGGY +V HA R+L V ++PLRN D +E T
Sbjct: 296 LDSLCNSASAQEPTSHRGGGSGGYLEHVFQHAARELFGIHVDEVTYRPLRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G + L F A GFRNIQNL+QKL+R R PY ++E+MACP+GCLNGG Q++ +P
Sbjct: 356 KEGRILLHFAAAYGFRNIQNLVQKLRRGRCPYHYVEVMACPAGCLNGGGQLKAPD--APS 413
Query: 416 ETALELETILCDLAKSEPRENAT-LEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
+ L+ +L + ++E E+A ++ LY+ WL G+ +++ +L+T YH + K + L+
Sbjct: 414 KELLQHVEMLYGMVRTEAPEDAPGVQELYECWLQGEGSERAGRLLHTGYHAVEKASSGLS 473
Query: 475 VKW 477
++W
Sbjct: 474 IRW 476
>gi|62897571|dbj|BAD96725.1| nuclear prelamin A recognition factor-like variant [Homo sapiens]
Length = 476
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/487 (47%), Positives = 306/487 (62%), Gaps = 24/487 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK +G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRAGSGV-AKIRIEDDGSYFQINQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL S CPGW+CYAEK+HG F LP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DCRQALPLLASACPGWICYAEKTHGSFTLPHISTARSPQQVMGSLVKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--GVSLPDLEPAP 295
Query: 297 LD-----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
LD +E HR G GSGGY +V HA R+L V +KPLRN D +
Sbjct: 296 LDSLCSGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQ 350
Query: 352 EATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
E T G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 351 EVTLEKEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPD 410
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
S +E +E + + P + ++ LY WL G ++ +L+T YH + K +
Sbjct: 411 RPS-RELLQHVERLYGMVRAEAPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKAS 469
Query: 471 IALNVKW 477
L ++W
Sbjct: 470 TGLGIRW 476
>gi|426380599|ref|XP_004056950.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL [Gorilla
gorilla gorilla]
Length = 476
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/487 (47%), Positives = 306/487 (62%), Gaps = 24/487 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPLKVEKRVGSGV-AKIRIEDDGSYFQINQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A++ ++ + IV+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANQMAAPSQQRLIVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DCRQALPLLASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLVKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--GVSLPDLEPAP 295
Query: 297 LD-----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
LD +E HR G GSGGY +V HA R+L V +KPLRN D +
Sbjct: 296 LDSLCSGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQ 350
Query: 352 EATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
E T G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 351 EVTLEKEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPD 410
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
S +E +E + + P + ++ LY WL G ++ +L+T YH + K +
Sbjct: 411 RPS-RELLQHVERLYGMVRAEAPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKAS 469
Query: 471 IALNVKW 477
L ++W
Sbjct: 470 TGLGIRW 476
>gi|163915151|ref|NP_001106557.1| cytosolic Fe-S cluster assembly factor narfl [Xenopus (Silurana)
tropicalis]
gi|259511276|sp|A8WH18.1|NARFL_XENTR RecName: Full=Cytosolic Fe-S cluster assembly factor narfl;
AltName: Full=Nuclear prelamin A recognition factor-like
protein
gi|159155500|gb|AAI54938.1| LOC100127749 protein [Xenopus (Silurana) tropicalis]
Length = 476
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/484 (49%), Positives = 311/484 (64%), Gaps = 15/484 (3%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGRE 59
MASS FSGVLQLTDLDDFIGPSQECIKPI +EK +G R AKI+I+DDG+Y+Q G
Sbjct: 1 MASS-FSGVLQLTDLDDFIGPSQECIKPIKVEKKAG-RAAAKIQIEDDGSYVQINPEGAA 58
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLS 119
KL+K +I+L DCLACSGC+TSAE++LITQQSHEE+ K++++N K + K +V+S
Sbjct: 59 RKLEKAKITLNDCLACSGCVTSAETILITQQSHEELYKILKQN---KTENPLEHKVVVVS 115
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL- 178
++ Q SL A+F L + KL FFK+LGV V D + FSL+E + EF+ RF
Sbjct: 116 VSPQSWASLAARFNLIMQDTAQKLTAFFKQLGVHHVFDTNFSRNFSLLESQREFIQRFKR 175
Query: 179 ----SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
P+ S CPGW+CYAEK+HG FILPYIS KSPQQVMGSL+K+H A++ + P
Sbjct: 176 QKEDKKSLPMLASACPGWICYAEKTHGSFILPYISSTKSPQQVMGSLVKSHFAKEKNLKP 235
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKD 294
+ IYHVT+MPCYDKKLEASR DFYN+E R+VDCVIT E+ +L E +L +
Sbjct: 236 NQIYHVTVMPCYDKKLEASRPDFYNQEYETREVDCVITTGEVLRMLEQE--GLSLSDVDP 293
Query: 295 GILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREAT 354
LD + + G GSGGY +V HA ++L V +KPL+N D +E T
Sbjct: 294 SPLDTLFGSAVQEEPVGHQGGGSGGYLEHVFRHAAQELFGVHVDTVVYKPLKNKDFQEVT 353
Query: 355 FTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS 413
G+V L F +A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG QI+ E S
Sbjct: 354 LEQDGNVVLHFALAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQIKAEGEGS 413
Query: 414 PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIAL 473
K+ +E + + P E + LY WL K + K + L+T YH + K N L
Sbjct: 414 -KDLLQRVEDLYNTVRTERPEEREEVAQLYGDWLEDKDSAKARQALHTQYHAVEKINSGL 472
Query: 474 NVKW 477
+KW
Sbjct: 473 TIKW 476
>gi|31217349|gb|AAH52830.1| Nuclear prelamin A recognition factor-like [Mus musculus]
Length = 476
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/482 (47%), Positives = 306/482 (63%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ CIKP+ + K G AKI I+DDG+Y Q +GR +K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQNCIKPVKVAKKPGSGI-AKIHIEDDGSYFQVNQDGRTQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCVTSAETVLITQQSHEELRKVL---DANKEAAPGQQRLVVVSIS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L KL FFK++GV V D A FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFRLDPTDTARKLTSFFKKIGVHFVFDTAFARNFSLLESQKEFVQRFREQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FILPYIS +SPQQVMGSL+K A++ + P
Sbjct: 178 NSREALPVLASACPGWICYAEKTHGNFILPYISTARSPQQVMGSLVKDFFAQQQLLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E A+ T E +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEYQTRDVDCVLTTGEVFRLLEEEGASLT--ELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY +V HA ++L V ++PLRN D +E T
Sbjct: 296 LDGLTSSVSAEEPSSHRGGGSGGYLEHVFRHAAQELFGIHVAEVTYQPLRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V LRF +A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 356 REGQVLLRFAVAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLKAPDTEG-S 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E +LE + + P + ++ LY+ WL G+ +++ +L+T YH + K + L++
Sbjct: 415 ELLQQLERLYSMVRTEAPEDAPGVQELYQHWLQGEDSERASRLLHTQYHAVEKPSSGLSI 474
Query: 476 KW 477
+W
Sbjct: 475 RW 476
>gi|197100706|ref|NP_001124725.1| cytosolic Fe-S cluster assembly factor NARFL [Pongo abelii]
gi|75042593|sp|Q5RF36.1|NARFL_PONAB RecName: Full=Cytosolic Fe-S cluster assembly factor NARFL;
AltName: Full=Iron-only hydrogenase-like protein 1;
Short=IOP1; AltName: Full=Nuclear prelamin A recognition
factor-like protein
gi|55725679|emb|CAH89621.1| hypothetical protein [Pongo abelii]
Length = 476
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/487 (47%), Positives = 305/487 (62%), Gaps = 24/487 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK +G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRAGSGV-AKIRIEDDGSYFQINQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K + + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMVAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DCKQALPLLASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLVKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--GVSLPDLEPAP 295
Query: 297 LD-----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
LD +E HR G GSGGY +V HA R+L V +KPLRN D +
Sbjct: 296 LDSLCSGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQ 350
Query: 352 EATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
E T G V L +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 351 EVTLEKEGQVLLHLAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPD 410
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
S +E +E + + P + ++ LY WL G ++ +L+T YH + K +
Sbjct: 411 RPS-RELLQHVERLYGMVRAEAPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKAS 469
Query: 471 IALNVKW 477
L ++W
Sbjct: 470 TGLGIRW 476
>gi|410985401|ref|XP_003999011.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL [Felis
catus]
Length = 476
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/482 (47%), Positives = 310/482 (64%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQET-NGREEK 61
+S FSGVLQLTDLDDFIGPSQ+CIKP+ ++K SG AKI I+DDG+Y Q T +G K
Sbjct: 2 ASPFSGVLQLTDLDDFIGPSQDCIKPMKVDKRSGSGV-AKIHIEDDGSYFQVTQDGGTRK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ KVI +A+K ++ + +V+S++
Sbjct: 61 LEKAKISLDDCLACSGCVTSAETVLITQQSHEELRKVI---DANKTAAPGQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAAQFGLNPTDTARKLTAFFKKIGVHYVFDTSFSRNFSLLESQREFVQRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG F++PY+S V+SPQQVMGSL+K A++ + P
Sbjct: 178 DSQQALPVLASACPGWICYAEKTHGSFLIPYLSTVRSPQQVMGSLVKDFFAQQQHLTPDR 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF++++ RDVDCV+T E+ LL E +L E +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFSQDYQTRDVDCVVTTGEVFKLLEEE--GVSLSELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY +V HA R+L + ++PLRN D +E T
Sbjct: 296 LDSLCSSVSAQEPSSHRGGGSGGYLEHVFQHAARELFGIHVDEITYRPLRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F A GFRNIQNL+QKLKR R PY ++E+MACP+GCLNGG Q++ K
Sbjct: 356 KEGQVVLHFAAAYGFRNIQNLVQKLKRGRCPYHYVEVMACPAGCLNGGGQLKAPSTPG-K 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E +ET+ + P + ++ LY+ WL G+ +++ +L+TSYH + K + +L +
Sbjct: 415 ELLQRVETLYSMVRTEAPEDAPGIQELYRCWLQGEGSERAGRLLHTSYHAVEKASSSLGI 474
Query: 476 KW 477
+W
Sbjct: 475 RW 476
>gi|26335839|dbj|BAC31620.1| unnamed protein product [Mus musculus]
Length = 476
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 305/482 (63%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ CIKP+ + K G AKI I+DDG+Y Q +GR +K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQNCIKPVKVAKKPGSGI-AKIHIEDDGSYFQVNQDGRTQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCVTSAETVLITQQSHEELRKVL---DANKEAAPGQQRLVVVSIS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L KL FFK++GV V D A FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFRLDPTDTARKLTSFFKKIGVHFVFDTAFARNFSLLESQKEFVQRFREQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FILPYIS +SPQQVMGSL+K A++ + P
Sbjct: 178 NSREALPVLASACPGWICYAEKTHGNFILPYISTARSPQQVMGSLVKDFFAQQQLLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L E +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEYQTRDVDCVLTTGEVFRLLEEE--GVSLTELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY +V HA ++L V ++PLRN D +E T
Sbjct: 296 LDGLTSSVSAEEPSSHRGGGSGGYLEHVFRHAAQELFGIHVAEVTYQPLRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V LRF +A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 356 REGQVLLRFAVAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLKAPDTEG-S 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E +LE + + P + ++ LY+ WL G+ +++ +L+T YH + K + L++
Sbjct: 415 ELLQQLERLYSMVRTGAPEDAPGVQELYQHWLQGEDSERASRLLHTQYHAVEKPSSGLSI 474
Query: 476 KW 477
+W
Sbjct: 475 RW 476
>gi|254911120|ref|NP_080514.3| cytosolic Fe-S cluster assembly factor NARFL [Mus musculus]
gi|148887155|sp|Q7TMW6.2|NARFL_MOUSE RecName: Full=Cytosolic Fe-S cluster assembly factor NARFL;
AltName: Full=Iron-only hydrogenase-like protein 1;
Short=IOP1; AltName: Full=Nuclear prelamin A recognition
factor-like protein
gi|12858305|dbj|BAB31268.1| unnamed protein product [Mus musculus]
gi|148690499|gb|EDL22446.1| nuclear prelamin A recognition factor-like [Mus musculus]
Length = 476
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 305/482 (63%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ CIKP+ + K G AKI I+DDG+Y Q +GR +K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQNCIKPVKVAKKPGSGI-AKIHIEDDGSYFQVNQDGRTQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCVTSAETVLITQQSHEELRKVL---DANKEAAPGQQRLVVVSIS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L KL FFK++GV V D A FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFRLDPTDTARKLTSFFKKIGVHFVFDTAFARNFSLLESQKEFVQRFREQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FILPYIS +SPQQVMGSL+K A++ + P
Sbjct: 178 NSREALPVLASACPGWICYAEKTHGNFILPYISTARSPQQVMGSLVKDFFAQQQLLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L E +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEYQTRDVDCVLTTGEVFRLLEEE--GVSLTELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY +V HA ++L V ++PLRN D +E T
Sbjct: 296 LDGLTSSVSAEEPSSHRGGGSGGYLEHVFRHAAQELFGIHVAEVTYQPLRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V LRF +A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 356 REGQVLLRFAVAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLKAPDTEG-S 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E +LE + + P + ++ LY+ WL G+ +++ +L+T YH + K + L++
Sbjct: 415 ELLQQLERLYSMVRTEAPEDAPGVQELYQHWLQGEDSERASRLLHTQYHAVEKPSSGLSI 474
Query: 476 KW 477
+W
Sbjct: 475 RW 476
>gi|395835676|ref|XP_003790801.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL [Otolemur
garnettii]
Length = 476
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/489 (45%), Positives = 311/489 (63%), Gaps = 28/489 (5%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTG-AKIRIQDDGAYIQ-ETNGREE 60
+S FSG LQLTDLDDFIGPSQ+CIKP+ ++K P +G AKI I+DDG+YIQ +G
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQDCIKPVKVDK--RPESGIAKIHIEDDGSYIQVNQDGGTR 59
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
+L+K ++SL DCLACSGC+TSAE+VL+TQQSH+E+ K + +A+K ++ + +V+S+
Sbjct: 60 RLEKAKVSLNDCLACSGCVTSAETVLVTQQSHKELRKAL---DANKMAAPSQQRLVVVSV 116
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q SL + L+ KL FFK++G V D + FSL+E + EF+ RF
Sbjct: 117 SPQSRASLAVQLQLNPTDTARKLTSFFKKIGAHFVFDTAFSRNFSLLESQREFVQRFREQ 176
Query: 181 GG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
P+ S CPGW+CYAEK+H FI+PY+S +SPQQVMGSL+K LA++ + P
Sbjct: 177 ASSPQALPVLASACPGWICYAEKTHSSFIIPYLSTARSPQQVMGSLVKDFLAQQQHLTPD 236
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E L E +
Sbjct: 237 KIYHVTVMPCYDKKLEASRPDFFNQEYQTRDVDCVLTTGEVFKLLEEE--GILLSELEPA 294
Query: 296 ILDW-----PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI 350
+LD +E HR G GSGGY +V HA R+L V ++PLRN D
Sbjct: 295 LLDGLSSSVSAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYRPLRNKDF 349
Query: 351 REATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
+E T G V LRF GFRNIQNL+QKLKR R PY ++E+MACP+GCLNGG Q++
Sbjct: 350 QEVTLEQGGQVLLRFAAVYGFRNIQNLVQKLKRGRCPYHYVEVMACPAGCLNGGGQLK-- 407
Query: 410 KVASPKETALELETILCDLAKSE-PRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
+ +P L+ L + ++E P + + LY+ WL G+++++ H+L+T YH + K
Sbjct: 408 ALDTPSRELLQHVERLYSMVRTEAPEDVPGVWELYQQWLQGEASERASHLLHTQYHAVEK 467
Query: 469 NNIALNVKW 477
+ L+++W
Sbjct: 468 ASSGLSIRW 476
>gi|335284772|ref|XP_003124717.2| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like [Sus
scrofa]
Length = 476
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/485 (46%), Positives = 307/485 (63%), Gaps = 20/485 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG +QLTDLDDFI PSQ+CIKP+ ++K G +GAKI I+DDG Y Q +G K
Sbjct: 2 ASPFSGAVQLTDLDDFIAPSQDCIKPVKVDKKLGS-SGAKIYIEDDGNYFQVSADGGTRK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKISLDDCLACSGCVTSAETVLITQQSHEELRKVL---DANKTAAPGQQRLVVISVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL +F L+ KL FFKR+G V D + FSL+E + EF+ RF
Sbjct: 118 PQSQASLAVRFQLNPTDTARKLTAFFKRIGAHYVFDTAFSRNFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
G P+ TS CPGW+CYAEK+HG +LP+IS +SPQQVMG+L+K A++ + P
Sbjct: 178 GSQQALPVLTSACPGWICYAEKTHGRALLPHISTARSPQQVMGALVKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK--D 294
IYHV +MPC+DKKLEASR DF+++E RDVDCVIT E+ LL E + + E D
Sbjct: 238 IYHVAVMPCHDKKLEASRPDFFSQEHQTRDVDCVITTGEVLKLLEEEGVSLSALEPAALD 297
Query: 295 GILDWPWD-EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
+ D E HR G GSGGY +V +A R+L V ++PLRN D++E
Sbjct: 298 SLCSTVSDQEPTSHR-----GGGSGGYLEHVFRYAARELFGIHVTEVTYRPLRNKDLQEV 352
Query: 354 TFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
T G V L F A GFRNIQNL+QKLKR R PY ++E+MACP+GCLNGG Q++
Sbjct: 353 TLEREGQVLLHFAAAYGFRNIQNLVQKLKRGRCPYHYVEVMACPAGCLNGGGQLKAPDTP 412
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIA 472
KE ++E + + P + ++ LY+ WL G+ +++ +L+TSYH + K +
Sbjct: 413 G-KELLQQVERLYAMVRTQAPEDAPGVQELYRRWLQGEGSERASQLLHTSYHAVEKAGSS 471
Query: 473 LNVKW 477
LN+KW
Sbjct: 472 LNIKW 476
>gi|12851667|dbj|BAB29126.1| unnamed protein product [Mus musculus]
Length = 476
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 304/482 (63%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ CIKP+ + K G AKI I+DDG+Y Q +GR +K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQNCIKPVKVAKKPGSGI-AKIHIEDDGSYFQVNQDGRTQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCVTSAETVLITQQSHEELRKVL---DANKEAAPGQQRLVVVSIS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L KL FFK++GV V D A FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFRLDPTDTARKLTSFFKKIGVHFVFDTAFARNFSLLESQKEFVQRFREQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FILPYIS +SPQQVMGSL+K A++ + P
Sbjct: 178 NSREALPVLASACPGWICYAEKTHGNFILPYISTARSPQQVMGSLVKDFFAQQQLLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L E +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEYQTRDVDCVLTTGEVFRLLEEE--GVSLTELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY +V HA ++L V ++PLRN D +E T
Sbjct: 296 LDGLTSSVSAEEPSSHRGGGSGGYLEHVFRHAAQELFGIHVAEVTYQPLRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V LRF +A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG Q+
Sbjct: 356 REGQVLLRFAVAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLTAPDTEG-S 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E +LE + + P + ++ LY+ WL G+ +++ +L+T YH + K + L++
Sbjct: 415 ELLQQLERLYSMVRTEAPEDAPGVQELYQHWLQGEDSERASRLLHTQYHAVEKPSSGLSI 474
Query: 476 KW 477
+W
Sbjct: 475 RW 476
>gi|410902225|ref|XP_003964595.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
[Takifugu rubripes]
Length = 476
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 310/482 (64%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSGVLQLTDLDDFI PSQEC+KP+ +EK G ++ AKI+I++DG+YIQ +G ++K
Sbjct: 2 ASHFSGVLQLTDLDDFITPSQECVKPVKVEKKQG-KSVAKIQIEEDGSYIQINQDGGKQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +I+L DCLACSGCITSAESVLITQQSHEE++KV++ N K ++ E +V
Sbjct: 61 LEKAKITLNDCLACSGCITSAESVLITQQSHEELLKVLQNN---KVNATEKKVVVVSVSP 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL--- 178
Q SL A++ LS + +L FFK LGV V D + FSL+E + EF++RF
Sbjct: 118 -QSRASLAARYDLSSTEAGRRLTSFFKGLGVHHVFDTTFSRTFSLLESQREFVERFQRKE 176
Query: 179 --SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ TS CPGW+CYAEK+HG+F+LPYIS +SPQQ+MGSL+K + AE+ G+ P
Sbjct: 177 QDKTSLPMMTSACPGWICYAEKTHGDFVLPYISTTRSPQQMMGSLVKGYFAEQRGLSPEQ 236
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHV +MPC+DKKLEASR+DFY ++ R+VDCVIT+ E++ +L E +L +
Sbjct: 237 IYHVAVMPCFDKKLEASRSDFYMDQPQTREVDCVITSGEVQQML--EERDVSLNNVEPVP 294
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF- 355
LD + L G+GSGGY H+V S+A + L E + +K L+N D +E T
Sbjct: 295 LDTVFSNVYGDEYLSHAGSGSGGYLHHVFSYAAKHLFGEEVKELTYKTLKNKDFQEVTLE 354
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F GFRNIQNL+QKLKR + PY F+E+MACPSGCLNGG Q++ + K
Sbjct: 355 KDGAVLLCFASTYGFRNIQNLVQKLKRGKSPYHFVEVMACPSGCLNGGGQLKALPGQNQK 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E ++E I P EN ++ LY+ WL ++ K +L T YH + K L +
Sbjct: 415 ELLQKVEAIYRAERPLLPEENNSVAELYQLWLRTVGEERAKELLRTQYHTVEKMKNGLTM 474
Query: 476 KW 477
KW
Sbjct: 475 KW 476
>gi|47218040|emb|CAG11445.1| unnamed protein product [Tetraodon nigroviridis]
Length = 479
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/485 (47%), Positives = 309/485 (63%), Gaps = 17/485 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSGVLQLTDLDDFI PSQEC+KP+ +EK G ++ AKI+I++DG+YIQ +G ++K
Sbjct: 2 ASHFSGVLQLTDLDDFITPSQECVKPVKVEKKQG-KSVAKIQIEEDGSYIQINQDGGKQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +I+L DCLACSGCITSAESVLITQQSHEE+ +V++ N KAS E +V
Sbjct: 61 LEKAKITLNDCLACSGCITSAESVLITQQSHEELFRVLQHN---KASETEKKVVVVSVSP 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL--- 178
Q S+ A++ LS + +L FFK LGV V D FSL+E + EF++RF
Sbjct: 118 -QSRASIAARYGLSSTEAGRRLTSFFKGLGVHHVFDTTFTRTFSLLESQREFVERFQRKE 176
Query: 179 --SGGGPLFTSECPG---WVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
+ P+ TS CPG W+CYAEK+HG+ ILPYIS +SPQQ+MGSL+K + AE+ G+
Sbjct: 177 QDNKSLPMMTSACPGTPGWICYAEKTHGDLILPYISTTRSPQQMMGSLVKGYFAEQQGLS 236
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK 293
P IYHV +MPCYDKKLEASR+DF+ E R+VDCVIT+ E++++L E +L + +
Sbjct: 237 PQQIYHVAVMPCYDKKLEASRSDFHMNEAQTREVDCVITSGEVQLML--EEKNVSLSDVE 294
Query: 294 DGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
LD + N L G+ SGGY H+V ++A + L E + +K L+N D +E
Sbjct: 295 PAPLDTVFSNVNGDEFLSHAGSSSGGYLHHVFTYAAKHLFGEEVKELTYKTLKNKDFQEV 354
Query: 354 TFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
T G V L F GFRNIQNL+QK KR + PY F+E+MACPSGCLNGG Q++
Sbjct: 355 TLEKDGVVLLCFASTYGFRNIQNLVQKFKRGKCPYHFVEVMACPSGCLNGGGQLKALPGQ 414
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIA 472
+PKE ++E I P +N + LY +WL ++ K +L+T YH + K
Sbjct: 415 NPKELLQKVEEIYRAERSMVPEDNTRVAELYHSWLHSVGEERAKELLHTRYHTVEKMKNG 474
Query: 473 LNVKW 477
L +KW
Sbjct: 475 LTMKW 479
>gi|431906733|gb|ELK10854.1| Cytosolic Fe-S cluster assembly factor NARFL [Pteropus alecto]
Length = 512
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/518 (44%), Positives = 306/518 (59%), Gaps = 50/518 (9%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ--------- 53
+S FSG LQLTDLDDFIGPSQ+CIKP+ ++K G AKI I+DDG+Y Q
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQDCIKPMKVDKRQGSGM-AKIHIEDDGSYFQISQSLAFGI 60
Query: 54 ----------------------------ETNGREEKLKKVEISLTDCLACSGCITSAESV 85
E +G KL+K +ISL DCLACSGC+TSAE+V
Sbjct: 61 YLSLQPHVCSLGTNDPSGTSVESRKSPAEFDGGTRKLEKAKISLDDCLACSGCVTSAETV 120
Query: 86 LITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCG 145
LITQQSHEE+ KV+ +A+K K +V+S++ Q SL +F ++ KL
Sbjct: 121 LITQQSHEELRKVL---DANKTVVPGQQKLVVISVSPQSRASLAVRFQMNPTDTARKLTA 177
Query: 146 FFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSH 200
FFK+LG V D + FSL+E + EF+ RF P+ TS CPGW+CYAEK+H
Sbjct: 178 FFKKLGAHYVFDTAFSRNFSLLESQREFVRRFRGQADSKQALPVLTSACPGWICYAEKTH 237
Query: 201 GEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE 260
G I+PYIS +SPQQVMGSL+K A++ V P IYHVT+MPCYDKKLEASR DF+N+
Sbjct: 238 GSAIIPYISTARSPQQVMGSLVKDFFAQQQHVTPDKIYHVTVMPCYDKKLEASRPDFFNQ 297
Query: 261 ELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGY 320
E RDVDCV+T E+ LL E +L E + LD + + G GSGGY
Sbjct: 298 EQQTRDVDCVVTTGEVFKLLEEE--GVSLSELEPAPLDGLYSSVSTQEPTSHRGGGSGGY 355
Query: 321 AHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQK 379
+V HA ++L V ++PLRN D +E T G V L F +A GFRNIQNL+QK
Sbjct: 356 LEHVFRHAAQELFGIHVDEVTYRPLRNKDFQEVTLESEGRVLLHFAVAYGFRNIQNLVQK 415
Query: 380 LKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATL 439
LKR R PY ++E+MACPSGCLNGG Q++ S KE +E + + EP + +
Sbjct: 416 LKRGRCPYHYVEVMACPSGCLNGGGQLKAPDTPS-KELLQHVERLYSMVRTEEPEDVPGV 474
Query: 440 EHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+ LY+ WL G+ +++ +L+TSYH + K N L+++W
Sbjct: 475 QELYRHWLHGEGSEQASRLLHTSYHAVEKANSGLSIRW 512
>gi|73959191|ref|XP_547207.2| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL isoform 1
[Canis lupus familiaris]
Length = 476
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/483 (46%), Positives = 316/483 (65%), Gaps = 16/483 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQET-NGREEK 61
+S FSG LQLTDLDDFIGPSQ+CIKP+ +++ G AKI I+DDG+Y Q + +G ++
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQDCIKPVKVDRRPGSGV-AKIHIEDDGSYFQVSPDGGTQR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKISLDDCLACSGCVTSAETVLITQQSHEELRKVL---DANKTAAPGQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL--- 178
Q SL A+F LS KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLSPTDTARKLTAFFKKIGVHYVFDTAFSRNFSLLESQREFVQRFREQT 177
Query: 179 --SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
+ P+ TS CPGW+CYAEK+HG F++PY+S +SPQQVMGSL+K A++ + P
Sbjct: 178 NSTQALPVLTSACPGWICYAEKTHGNFLIPYLSTARSPQQVMGSLVKDFFAQQQHLTPDR 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L E +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVVTTGEVFKLLEEE--GVSLSELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY +V HA R+L V ++PLRN D +E T
Sbjct: 296 LDSLCSSMSAQEPSSHRGGGSGGYLEHVFQHAARELFGIHVDEVTYRPLRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F A GFRNIQNL+QKLKR R PY ++E+MACP+GCLNGG Q++ + P
Sbjct: 356 KEGRVLLHFAAAYGFRNIQNLVQKLKRGRCPYHYVEVMACPAGCLNGGGQLKAPDM--PS 413
Query: 416 ETALELETILCDLAKSEPRENAT-LEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
+ L+ +L + ++E EN ++ LY++WL G+ +++ +L+TSYH + K + +L+
Sbjct: 414 KELLQQVEMLYGMVRTEVPENVPGVQELYRSWLQGEGSEQAGRLLHTSYHAVEKASSSLS 473
Query: 475 VKW 477
++W
Sbjct: 474 IRW 476
>gi|149750886|ref|XP_001496296.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like [Equus
caballus]
Length = 476
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/482 (46%), Positives = 305/482 (63%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ+CIKP+ ++K G AKI I+DDG+Y Q +G K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQDCIKPVKVDKRLGSGV-AKIHIEDDGSYFQVGHDGGTRK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A+K S+ + +V+S++
Sbjct: 61 LEKAKISLDDCLACSGCVTSAETVLITQQSHEELRKVL---DANKTSAPGQQRLVVISVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK+LG V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTTFFKKLGAHYVFDTAFSRNFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ TS CPGW+CYAEK+HG ++P++S +SPQQVMGSL+K A++ + P
Sbjct: 178 DSKQALPVLTSACPGWICYAEKTHGTLLIPHLSTARSPQQVMGSLVKDFFAQQQRLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+++E RDVDCVIT E+ LL E L E +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFSQEHQTRDVDCVITTGEVFKLLQEE--GVLLSELEPTP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY +V HA ++L V ++PLRN D +E T
Sbjct: 296 LDSLCSSGSAQEPTSHQGGGSGGYLEHVFRHAAQELFGVHVTEVTYRPLRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F +A GFRNIQNL+QKLKR R PY ++E+MACP+GCLNGG Q++ A K
Sbjct: 356 REGQVLLHFAMAYGFRNIQNLVQKLKRGRCPYHYVEVMACPAGCLNGGGQLKAPDTAD-K 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E +E + + P + ++ LYK WL G+ +++ +L+TSYH + K + L++
Sbjct: 415 ELLQHVERLYSMVRTEVPEDVPGVQELYKRWLQGEGSEQAGRLLHTSYHAVEKASSGLSI 474
Query: 476 KW 477
+W
Sbjct: 475 RW 476
>gi|427787813|gb|JAA59358.1| Putative nuclear architecture related protein [Rhipicephalus
pulchellus]
Length = 481
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/485 (47%), Positives = 304/485 (62%), Gaps = 21/485 (4%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEKLKK 64
FSGVL++TDL+DFIGPSQECIKP+ +EK G + G+ I+I DDG+Y+Q + +G+ KL+K
Sbjct: 5 FSGVLRITDLNDFIGPSQECIKPVTVEKRPG-KLGS-IKIGDDGSYLQVDESGQASKLEK 62
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+I+LTDCLACSGC+TSAE+VLITQQS E++ V++EN E K IV+++A Q
Sbjct: 63 AQITLTDCLACSGCVTSAETVLITQQSSEQLYTVLKEN---AELPEEKRKLIVVTVAPQV 119
Query: 125 VLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
S K+++ +E AKL GFFK LG VLD F+L+E+ +F++R+
Sbjct: 120 AASFAGKYSVDYESASAKLTGFFKTLGAHYVLDSTFGREFALIEVLRDFIERWARRDSDR 179
Query: 183 ---PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
PL S CPG+VCYAEK+HG+ +LP+ISR +SPQQ+MGSL+K LA +LG IYH
Sbjct: 180 TALPLLASSCPGFVCYAEKTHGDVLLPHISRARSPQQIMGSLVKKFLASRLGKKADQIYH 239
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDW 299
V++MPCYDKKLEASRADFY+E RDVDCVIT+VE+E +LA E + E D
Sbjct: 240 VSVMPCYDKKLEASRADFYDEIYSTRDVDCVITSVEVESMLAKE--DKSFDELPSAASDS 297
Query: 300 PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-G 358
+ R G+GSGGY V A R L V FK LRN D RE T G
Sbjct: 298 LFRCEVGGRPYRHPGSGSGGYCEYVFVEAARLLFHRRPEEVVFKTLRNQDFREVTLELGG 357
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+ LRF IANGFRNIQN++QK+KR + PY FIEIMACP+GCLNGGAQ+R + +
Sbjct: 358 ETVLRFAIANGFRNIQNVVQKMKRAKCPYHFIEIMACPAGCLNGGAQLRPDD-GDSRALL 416
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLG------GKSTDKGKHMLNTSYHNIPKNNIA 472
+E + P N + +Y+ WLG G +L T+YH + K A
Sbjct: 417 RRVEDAYNAVQCQPPGANKAVLEVYRDWLGLEDPLHGTGGSGDATLLRTTYHALEKTTNA 476
Query: 473 LNVKW 477
LN++W
Sbjct: 477 LNIRW 481
>gi|332239993|ref|XP_003269175.1| PREDICTED: LOW QUALITY PROTEIN: cytosolic Fe-S cluster assembly
factor NARFL [Nomascus leucogenys]
Length = 476
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/482 (46%), Positives = 299/482 (62%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK +G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRAGSGV-AKIRIEDDGSYFQVNQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVQRFQRQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DCRQALPLLASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLVKDFFAQQQRLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVLRLLEEE--GVSLPDLLPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + + G GSGGY +V HA R+L P RN D +E T
Sbjct: 296 LDSLYSGASAEEPTSHRGGGSGGYLEHVFRHAARELFGIHVTNPTCAPPRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F + GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++ S +
Sbjct: 356 KEGQVLLHFAMVYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPDRPS-R 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E +E + + P + ++ LY WL G ++ +L+T YH + K + L +
Sbjct: 415 ELLQHVERLYGMVRAEAPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKASTGLGI 474
Query: 476 KW 477
+W
Sbjct: 475 RW 476
>gi|74211319|dbj|BAE26421.1| unnamed protein product [Mus musculus]
Length = 492
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/496 (46%), Positives = 308/496 (62%), Gaps = 26/496 (5%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ CIKP+ + K G AKI I+DDG+Y Q +GR +K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQNCIKPVKVAKKPGSGI-AKIHIEDDGSYFQVNQDGRTQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCVTSAETVLITQQSHEELRKVL---DANKEAAPGQQRLVVVSIS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L KL FFK++GV V D A FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFRLDPTDTARKLTSFFKKIGVHFVFDTAFARNFSLLESQKEFVQRFREQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FILPYIS +SPQQVMGSL+K A++ + P
Sbjct: 178 NSREALPVLASACPGWICYAEKTHGNFILPYISTARSPQQVMGSLVKDFFAQQQLLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK--D 294
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E + T E D
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEYQTRDVDCVLTTGEVFRLLEEEGVSLTELEPAPLD 297
Query: 295 GI----LDWPWDEHNPHRMLLVNG--------TGSGGYAHNVLSHAIRQLCPGESPVVEF 342
G+ + P R V+ GSGGY +V HA ++L V +
Sbjct: 298 GLDLSCVAPPALTRPSPRTSSVSAEEPSSHRGGGSGGYLEHVFRHAAQELFGIHVAEVTY 357
Query: 343 KPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLN 401
+PLRN D +E T G V LRF +A GFRNIQNL+QKLKR R PY ++E+MACPSGCLN
Sbjct: 358 QPLRNKDFQEVTLEREGQVLLRFAVAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLN 417
Query: 402 GGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
GG Q++ E +LE + + P + ++ LY+ WL G+ +++ +L+T
Sbjct: 418 GGGQLKAPDTEG-SELLQQLERLYSMVRTEAPEDAPGVQELYQHWLQGEDSERASRLLHT 476
Query: 462 SYHNIPKNNIALNVKW 477
YH + K + L+++W
Sbjct: 477 QYHAVEKPSSGLSIRW 492
>gi|340369769|ref|XP_003383420.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
[Amphimedon queenslandica]
Length = 486
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/488 (46%), Positives = 314/488 (64%), Gaps = 17/488 (3%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAK-IRIQDDGAYIQ-ETNGREEK 61
++FSG L+LTDLDDFI PSQECIKP+ +++ + G+ I+I++DG+YI+ + G ++K
Sbjct: 2 AKFSGALKLTDLDDFITPSQECIKPVKVDRVANATKGSSAIKIENDGSYIEIDKTGAQKK 61
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K I+L DCLACSGCITSAESVLI +QS EE+ K++ EN K K +V+S++
Sbjct: 62 LEKAVITLNDCLACSGCITSAESVLIAEQSQEELYKILEENKKVKEKEGGKEKLVVVSVS 121
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS-- 179
Q V SL F + E++ +KL F K+LGVD V D+ + SL+E EF+ RF
Sbjct: 122 PQSVASLAVNFKKTMEEMSSKLVSFLKQLGVDFVFDITFSRDISLIESAQEFVRRFQGSS 181
Query: 180 --GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
G P+ S CPGWVCYAEK+HG+FILPYIS KSPQQ+MGSL+K HLA+ P +
Sbjct: 182 NPGSIPMLASACPGWVCYAEKTHGDFILPYISTTKSPQQIMGSLVKDHLAKAHRKMPDQV 241
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGI 296
YHVT+MPCYDKKLEASR DFY++ RDVDCVIT E+E++L +E+ +L
Sbjct: 242 YHVTIMPCYDKKLEASREDFYHDLYSTRDVDCVITTGEVEIMLNEHEVDIDSLPLTP--- 298
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
+D P+ ++ +++ G+GSGGY + + +A ++L +E+K LRN D E +
Sbjct: 299 MDEPFCSYDKDQLVSHEGSGSGGYLNYIFKYACKELFGETVDSIEYKVLRNKDFYECSLQ 358
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS-- 413
G L+F A GFRNIQN++QKLKRKR Y +IE+MACPSGCLNGG QI+NE+
Sbjct: 359 VDGKEVLKFAAAYGFRNIQNVVQKLKRKRCGYHYIEVMACPSGCLNGGGQIKNEEDKGSA 418
Query: 414 ----PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
KE ++ L +P EN L+ +YK WL ++DK + ML+T YH I K
Sbjct: 419 SQLLSKENLQNVDAAYKSLRPRKPTENPKLDLIYKEWLEDSNSDKVQSMLHTKYHAIEKF 478
Query: 470 NIALNVKW 477
AL +KW
Sbjct: 479 TSALTIKW 486
>gi|224070248|ref|XP_002188515.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL
[Taeniopygia guttata]
Length = 475
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 308/482 (63%), Gaps = 15/482 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
++RFS LQLT+LDDFI P+QECIKP+ ++K + + A+IRI+ DG+Y Q +G EK
Sbjct: 2 AARFSAALQLTELDDFIAPAQECIKPVKVQK-NPTKAAARIRIEADGSYFQVNQDGEAEK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +I+L DCLACSGCITSAE+VL+ QQSHEE+ KV+ N KA++ K +V+S++
Sbjct: 61 LEKAKITLNDCLACSGCITSAETVLVRQQSHEELCKVLALN---KAAAAHEQKLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+ L + KL F K LGV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARCKLGLLETAQKLTTFLKGLGVHHVFDTTFSRNFSLLESQQEFVRRFHKQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ S CPGW+CYAEK+HG FI+P+IS KSPQQVMGSL+K + AE+ + P
Sbjct: 178 EDKKALPMLASACPGWICYAEKTHGSFIIPHISTTKSPQQVMGSLVKGYFAEQQHLPPDR 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+++E RDVDCVIT E+ LL E +L +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFSQEYQTRDVDCVITTGEVLKLLEQE--GVSLSDLDPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY ++ HA R+L + +KPLRN D +E T
Sbjct: 296 LDTMLGR-AAEELSSHRGGGSGGYLEHIFRHAARELFGVHVASIHYKPLRNKDFQEVTLE 354
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G+V L+F +A GFRNIQNL+QKLKR + PY ++E+MACPSGCLNGG QI+ E +S K
Sbjct: 355 RDGEVLLQFALAYGFRNIQNLVQKLKRGKCPYHYVEVMACPSGCLNGGGQIKLEGESS-K 413
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E ++E + L P EN + LY+ WLGG +D+ +L+T YH + + + AL++
Sbjct: 414 EELQQVERLYESLRAEIPEENQAVRELYEHWLGGWGSDRALQVLHTQYHAVERASSALSI 473
Query: 476 KW 477
KW
Sbjct: 474 KW 475
>gi|114660220|ref|XP_510719.2| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL isoform 7
[Pan troglodytes]
gi|397474843|ref|XP_003808866.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL [Pan
paniscus]
gi|410287800|gb|JAA22500.1| nuclear prelamin A recognition factor-like [Pan troglodytes]
Length = 476
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/482 (47%), Positives = 303/482 (62%), Gaps = 14/482 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK +G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRAGSGV-AKIRIEDDGSYFQINQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DCRQALPLLASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLVKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + +
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--GVSLPDLEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY +V HA R+L V +KPLRN D +E T
Sbjct: 296 LDSLCSGASAEEPSSHRGGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQEVTLE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++ S +
Sbjct: 356 KEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPDRPS-R 414
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E +E + + P + + LY WL G ++ +L+T YH + K + L +
Sbjct: 415 ELLQHVERLYGMVRAEAPEDAPGVRELYTHWLQGTDSECAGRLLHTQYHAVEKASTGLGI 474
Query: 476 KW 477
+W
Sbjct: 475 RW 476
>gi|150387422|sp|A4FV58.2|NARFL_BOVIN RecName: Full=Cytosolic Fe-S cluster assembly factor NARFL;
AltName: Full=Iron-only hydrogenase-like protein 1;
Short=IOP1; AltName: Full=Nuclear prelamin A recognition
factor-like protein
gi|296473458|tpg|DAA15573.1| TPA: cytosolic Fe-S cluster assembly factor NARFL [Bos taurus]
Length = 476
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/483 (45%), Positives = 305/483 (63%), Gaps = 16/483 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFI PSQ+CIKP+ +++ G AKI I+DDG+Y Q +G +K
Sbjct: 2 ASPFSGALQLTDLDDFIAPSQDCIKPMKVDRRPGSGV-AKIHIEDDGSYFQVSQDGGMKK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ KV+ A+K ++ + K +V+S++
Sbjct: 61 LEKAKISLDDCLACSGCVTSAETVLITQQSHEELRKVL---GANKTAAPDQQKLVVISVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL +F L+ KL FFK++G V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAVRFQLNPTDTARKLTAFFKKIGAHYVFDTAFSRNFSLLESQREFVRRFRGQA 177
Query: 182 GP-----LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P + TS CPGW+CYAEK+HG +LP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DPEQALPVLTSACPGWICYAEKTHGSTLLPHISTARSPQQVMGSLVKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
+YH T+MPCYDKKLEASR DF+++E RDVDCVIT E+ LL E +L E +
Sbjct: 238 VYHATVMPCYDKKLEASRPDFFSQEHQTRDVDCVITTGEVFKLLEEE--GVSLSELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY +V HA ++L V ++PLRN D++E
Sbjct: 296 LDSLCSSASAQEPTSHQGGGSGGYLEHVFRHAAQELFGIHVTEVTYRPLRNKDLQEVILE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F A GFRNIQNL+QKLKR R PY ++E+MACP+GCLNGG Q++ + P
Sbjct: 356 REGQVLLHFAAAYGFRNIQNLVQKLKRGRCPYHYVEVMACPAGCLNGGGQLKAPDM--PG 413
Query: 416 ETALELETILCDLAKSEPRENAT-LEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
+ L+ L L ++E E+A ++ LY+ WL G +++ +L+TSYH + K L+
Sbjct: 414 KELLQQVERLYGLVRTEAPEDAPGIQELYERWLQGAGSERAGRLLHTSYHAVEKAGSGLS 473
Query: 475 VKW 477
++W
Sbjct: 474 IRW 476
>gi|261824043|ref|NP_001076880.2| cytosolic Fe-S cluster assembly factor NARFL [Bos taurus]
gi|152941142|gb|ABS45008.1| nuclear prelamin A recognition factor-like [Bos taurus]
Length = 476
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/483 (45%), Positives = 305/483 (63%), Gaps = 16/483 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFI PSQ+CIKP+ +++ G AKI I+DDG+Y Q +G +K
Sbjct: 2 ASPFSGALQLTDLDDFIAPSQDCIKPMKVDRRPGSGV-AKIHIEDDGSYFQVSQDGGMKK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ KV+ A+K ++ + K +V+S++
Sbjct: 61 LEKAKISLDDCLACSGCVTSAETVLITQQSHEELRKVL---GANKTAAPDQQKLVVISVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL +F L+ KL FFK++G V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAVRFQLNPTDTARKLTAFFKKIGAHYVFDTAFSRNFSLLESQREFVRRFRGQA 177
Query: 182 GP-----LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P + TS CPGW+CYAEK+HG +LP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DPEQALPVLTSACPGWICYAEKTHGSTLLPHISTARSPQQVMGSLVKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
+YH T+MPCYDKKLEASR DF+++E RDVDCVIT E+ LL E +L E +
Sbjct: 238 VYHATVMPCYDKKLEASRPDFFSQEHQTRDVDCVITTGEVFKLL--EEGGVSLSELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY +V HA ++L V ++PLRN D++E
Sbjct: 296 LDSLCSSASAQEPTSHQGGGSGGYLEHVFRHAAQELFGIHVTEVTYRPLRNKDLQEVILE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F A GFRNIQNL+QKLKR R PY ++E+MACP+GCLNGG Q++ + P
Sbjct: 356 REGQVLLHFAAAYGFRNIQNLVQKLKRGRCPYHYVEVMACPAGCLNGGGQLKAPDM--PG 413
Query: 416 ETALELETILCDLAKSEPRENAT-LEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
+ L+ L L ++E E+A ++ LY+ WL G +++ +L+TSYH + K L+
Sbjct: 414 KELLQQVERLYGLVRTEAPEDAPGIQELYERWLQGAGSERAGRLLHTSYHAVEKAGSGLS 473
Query: 475 VKW 477
++W
Sbjct: 474 IRW 476
>gi|440913441|gb|ELR62891.1| Cytosolic Fe-S cluster assembly factor NARFL [Bos grunniens mutus]
Length = 476
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/483 (45%), Positives = 305/483 (63%), Gaps = 16/483 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFI PSQ+CIKP+ +++ G AKI I+DDG+Y Q +G +K
Sbjct: 2 ASPFSGALQLTDLDDFIAPSQDCIKPMKVDRRPGSGV-AKIHIEDDGSYFQVSQDGGMKK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ KV+ A+K ++ + K +V+S++
Sbjct: 61 LEKAKISLDDCLACSGCVTSAETVLITQQSHEELRKVL---GANKTAAPDQQKLVVISVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL +F L+ KL FFK++G V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAVRFQLNPTDTARKLTAFFKKIGAHYVFDTAFSRNFSLLESQWEFVRRFRGQA 177
Query: 182 GP-----LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P + TS CPGW+CYAEK+HG +LP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DPEQALPVLTSACPGWICYAEKTHGSTLLPHISTARSPQQVMGSLVKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
+YH T+MPCYDKKLEASR DF+++E RDVDCVIT E+ LL E +L E +
Sbjct: 238 VYHATVMPCYDKKLEASRPDFFSQEHQTRDVDCVITTGEVFKLLEEE--GVSLSELEPAP 295
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
LD + G GSGGY +V HA ++L V ++PLRN D++E
Sbjct: 296 LDSLCSSASAQEPTSHQGGGSGGYLEHVFRHAAQELFGIHVTEVTYRPLRNKDLQEVILE 355
Query: 357 C-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G V L F A GFRNIQNL+QKLKR R PY ++E+MACP+GCLNGG Q++ + P
Sbjct: 356 REGQVLLHFAAAYGFRNIQNLVQKLKRGRCPYHYVEVMACPAGCLNGGGQLKAPDM--PG 413
Query: 416 ETALELETILCDLAKSEPRENAT-LEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
+ L+ L L ++E E+A ++ LY+ WL G +++ +L+TSYH + K L+
Sbjct: 414 KELLQQVERLYGLVRTEAPEDAPGVQELYERWLQGAGSERAGRLLHTSYHAVEKAGSGLS 473
Query: 475 VKW 477
++W
Sbjct: 474 IRW 476
>gi|170049636|ref|XP_001870903.1| nitrate, fromate, iron dehydrogenase [Culex quinquefasciatus]
gi|167871388|gb|EDS34771.1| nitrate, fromate, iron dehydrogenase [Culex quinquefasciatus]
Length = 435
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/424 (50%), Positives = 283/424 (66%), Gaps = 8/424 (1%)
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVL 118
+KL+KVEI+L DCLACSGCITSAE VLITQQS EE++KV+ ENN K ++ + + IV
Sbjct: 14 QKLEKVEITLADCLACSGCITSAEGVLITQQSQEELLKVMNENNLAKLNNQLDAVRFIVF 73
Query: 119 SLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL 178
++A QP+LSL ++ L E+ ++ G+F++LG DLV+D IA +L+E NEF++RF
Sbjct: 74 TVAQQPILSLAKRYNLPAEETFERVAGYFRKLGADLVVDTKIADDLALIEGRNEFIERFN 133
Query: 179 SGGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
+ P+ S CPG+VCYAEK+HG FILPYI+ +SPQQ+MG L+K +LA+ LG+
Sbjct: 134 TNRQTLPMLASSCPGFVCYAEKTHGSFILPYIASTRSPQQIMGVLVKKYLAKLLGIAADR 193
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
IYHVT+MPCYDKKLEASR DF+++ RDVDCVIT++E+E +L LQ +
Sbjct: 194 IYHVTVMPCYDKKLEASREDFFSDVENCRDVDCVITSIEIEQMLDGS-GVQALQIVEKAP 252
Query: 297 LDWPWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
+DWPW P + + +GSGGY+ + +A R+L VEFK LRN D+REA
Sbjct: 253 IDWPWSTGRPPVFVWGHESSGSGGYSEYLFKYAARKLFNVAVDHVEFKNLRNSDLREAVL 312
Query: 356 -TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
G+V LRF IANGFRNIQN++QKLKR + Y +IEIMACPSGCLNGGAQIR S
Sbjct: 313 EQNGEVVLRFAIANGFRNIQNMVQKLKRGKCNYHYIEIMACPSGCLNGGAQIRPTGGQSQ 372
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWL-GGKSTDKGKHMLNTSYHNIPKNNIAL 473
+E ELE + L S P EN +E +Y +L + K L+TSYH I K N AL
Sbjct: 373 RELTAELEALYRSLPASNP-ENEAVEMVYTTFLDNAGDNNMRKEFLHTSYHPIEKMNTAL 431
Query: 474 NVKW 477
N+KW
Sbjct: 432 NIKW 435
>gi|14336719|gb|AAK61251.1|AE006464_19 Weakly similar to ORF YNL240c [S.cerevisiae] [Homo sapiens]
gi|119606130|gb|EAW85724.1| nuclear prelamin A recognition factor-like, isoform CRA_c [Homo
sapiens]
Length = 525
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/536 (43%), Positives = 307/536 (57%), Gaps = 73/536 (13%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQ-----------------------------ECIKPIPIEK 33
+S FSG LQLTDLDDFIGPSQ ECIKP+ +EK
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQVGSLQALLALAFLHTGNFSAAGCWEPDPWECIKPVKVEK 61
Query: 34 PSGPRTGAKIRIQDDGAYIQ---------------------ETNGREEKLKKVEISLTDC 72
+G AKIRI+DDG+Y Q +G +L+K ++SL DC
Sbjct: 62 RAGSGV-AKIRIEDDGSYFQINQEKLGELELEPTFGIFLPYSPDGGTRRLEKAKVSLNDC 120
Query: 73 LACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKF 132
LACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++ Q SL A+F
Sbjct: 121 LACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVSPQSRASLAARF 177
Query: 133 ALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTS 187
L+ KL FFK++GV V D + FSL+E + EF+ RF PL S
Sbjct: 178 QLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQADCRQALPLLAS 237
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+K A++ + P IYHVT+MPCYD
Sbjct: 238 ACPGWICYAEKTHGSFILPHISTARSPQQVMGSLVKDFFAQQQHLTPDKIYHVTVMPCYD 297
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD-----WPWD 302
KKLEASR DF+N+E RDVDCV+T E+ LL E +L + + LD +
Sbjct: 298 KKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--GVSLPDLEPAPLDSLCSGASAE 355
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVT 361
E HR G GSGGY +V HA R+L V +KPLRN D +E T G V
Sbjct: 356 EPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQEVTLEKEGQVL 410
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++ S +E +
Sbjct: 411 LHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPDRPS-RELLQHV 469
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
E + + P + ++ LY WL G ++ +L+T YH + K + L ++W
Sbjct: 470 ERLYGMVRAEAPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKASTGLGIRW 525
>gi|327280139|ref|XP_003224811.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
[Anolis carolinensis]
Length = 498
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/468 (46%), Positives = 300/468 (64%), Gaps = 15/468 (3%)
Query: 18 FIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEKLKKVEISLTDCLACS 76
++G Q+CIKPI ++K G + AKIRI+DDG Y+Q + +GR KL+K +I+L DCLACS
Sbjct: 38 YLGLFQDCIKPIKVDKKPG-KAIAKIRIEDDGTYVQVDPDGRSRKLEKAKITLNDCLACS 96
Query: 77 GCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSH 136
GC+TSAES+L+ QQSHEE+++V+ N + +S K +V+S++ Q SL AKF L+
Sbjct: 97 GCVTSAESILVAQQSHEELLRVLDANKTLEPASR---KLVVVSVSPQSRASLAAKFQLTP 153
Query: 137 EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-----SGGGPLFTSECPG 191
KL FFK LGVD V D + FSL+E + EF+ RF P+ + CPG
Sbjct: 154 LDTAKKLTAFFKTLGVDFVFDTTFSRNFSLIESQREFVQRFRRRTEDKEALPMLAAACPG 213
Query: 192 WVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLE 251
W+CYAEK+HG FILPYIS KSPQQVMGSL+K+H A++ V PS IYHV +MPCYDKKLE
Sbjct: 214 WICYAEKTHGSFILPYISTAKSPQQVMGSLVKSHFAKQQNVAPSQIYHVAVMPCYDKKLE 273
Query: 252 ASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRML- 310
ASR DF+ +E R+VDCVIT E+ LL E +L E LD + + + R+L
Sbjct: 274 ASRPDFFLQEHQTREVDCVITTGEVLKLLEQE--GGSLSEVDSAPLDAIFSDPSEDRLLT 331
Query: 311 LVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANG 369
+G GSGGY ++ HA ++L + + +K L+N D +E G L F +A G
Sbjct: 332 GHSGGGSGGYLEHIYKHAAKELFGVQVEEIRYKTLKNKDFQEVALEKDGKTLLLFALAYG 391
Query: 370 FRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLA 429
FRNIQN++QKLKR + PY +IE+MACPSGCLNGG QI+ E AS K+ E+E++ +
Sbjct: 392 FRNIQNVVQKLKRGKSPYHYIEVMACPSGCLNGGGQIKAEGEAS-KDLLQEVESVYESVP 450
Query: 430 KSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+P N T+ LY+ WLGG S ++ + L+T YH + + N +KW
Sbjct: 451 PEDPETNRTVADLYEQWLGGPSKEQTREALHTQYHAVERANTGFGIKW 498
>gi|410340689|gb|JAA39291.1| nuclear prelamin A recognition factor-like [Pan troglodytes]
Length = 483
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/473 (46%), Positives = 296/473 (62%), Gaps = 14/473 (2%)
Query: 12 LTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEKLKKVEISLT 70
+TDLDDFIGPSQECIKP+ +EK +G AKIRI+DDG+Y Q +G +L+K ++SL
Sbjct: 18 MTDLDDFIGPSQECIKPVKVEKRAGSGV-AKIRIEDDGSYFQINQDGGTRRLEKAKVSLN 76
Query: 71 DCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++ Q SL A
Sbjct: 77 DCLACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVSPQSRASLAA 133
Query: 131 KFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLF 185
+F L+ KL FFK++GV V D + FSL+E + EF+ RF PL
Sbjct: 134 RFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQADCRQALPLL 193
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+K A++ + P IYHVT+MPC
Sbjct: 194 ASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLVKDFFAQQQHLTPDKIYHVTVMPC 253
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
YDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + + LD +
Sbjct: 254 YDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--GVSLPDLEPAPLDSLCSGAS 311
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRF 364
G GSGGY +V HA R+L V +KPLRN D +E T G V L F
Sbjct: 312 AEEPSSHRGGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQEVTLEKEGQVLLHF 371
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETI 424
+A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++ S +E +E +
Sbjct: 372 AMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPDRPS-RELLQHVERL 430
Query: 425 LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+ P + + LY WL G ++ +L+T YH + K + L ++W
Sbjct: 431 YGMVRAEAPEDAPGVRELYTHWLQGTDSECAGRLLHTQYHAVEKASTGLGIRW 483
>gi|116007466|ref|NP_001036429.1| CG17683, isoform D [Drosophila melanogaster]
gi|51951087|gb|EAL24589.1| CG17683, isoform D [Drosophila melanogaster]
gi|294661893|gb|ADF28787.1| RE20880p [Drosophila melanogaster]
Length = 430
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/424 (49%), Positives = 284/424 (66%), Gaps = 10/424 (2%)
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLS 119
KL KV+ISL DCLACSGCITSAE VLITQQS EE++KV++EN+ +KAS + +N +TIV +
Sbjct: 10 KLNKVDISLQDCLACSGCITSAEEVLITQQSREELLKVLQENSKNKASEDWDNVRTIVFT 69
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
LA QP+LSL ++ + E L G+F+ LG D VL +A +L+E EF+DR+
Sbjct: 70 LATQPILSLAYRYQIGVEDAARHLNGYFRSLGADYVLSTKVADDIALLECRQEFVDRYRE 129
Query: 180 GGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
+ +S CPGWVCYAEK+HG F+LPY+S +SPQQ+MG L+K LA+K+ V S IY
Sbjct: 130 NENLTMLSSSCPGWVCYAEKTHGNFLLPYVSTTRSPQQIMGVLVKQILADKMNVPASRIY 189
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD 298
HVT+MPCYDKKLEASR DF+++ RDVDCVIT+VE+E LL+ A L + LD
Sbjct: 190 HVTVMPCYDKKLEASREDFFSKANNSRDVDCVITSVEVEQLLSE--AQQPLSQYDLLDLD 247
Query: 299 WPWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPDIREATF- 355
WPW P M+ + T SGGYA ++ +A + + + +EFK L+N D RE
Sbjct: 248 WPWSNVRPEFMVWAHEKTLSGGYAEHIFKYAAKHIFNEDLKTELEFKQLKNRDFREIILK 307
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVASP 414
G L+F IANGFRNIQNL+QKLKR+++ Y F+E+MACPSGC+NGGAQIR
Sbjct: 308 QNGKTVLKFAIANGFRNIQNLVQKLKREKVSNYHFVEVMACPSGCINGGAQIRPTTGQHV 367
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN-NIAL 473
+E +LE + +L +SEP EN+ +H+Y +L G +DK +L+T YH++ +I+L
Sbjct: 368 RELTRKLEELYQNLPRSEP-ENSLTKHIYNDFLDGFQSDKSYDVLHTRYHDVVSELSISL 426
Query: 474 NVKW 477
N+ W
Sbjct: 427 NINW 430
>gi|444727268|gb|ELW67769.1| Cytosolic Fe-S cluster assembly factor NARFL [Tupaia chinensis]
Length = 639
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/491 (44%), Positives = 296/491 (60%), Gaps = 27/491 (5%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ+CIKP+ ++ G AKI IQDDG+Y Q +G +K
Sbjct: 160 ASPFSGALQLTDLDDFIGPSQDCIKPVKADRRPGSGV-AKIHIQDDGSYFQVHQDGGSQK 218
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTK-TIVLSL 120
L+K ++SL DCLACSGC+TSAE+VLI QQSHEE+ KV+R N + E K ++ L
Sbjct: 219 LEKAKVSLNDCLACSGCVTSAETVLIAQQSHEELRKVLRANEDGGSQKLEKAKVSLNDCL 278
Query: 121 AIQPVLSLGAKFAL---SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF 177
A ++ + SHE++ L +G V D + FSL+E + EF+ RF
Sbjct: 279 ACSGCVTSAETVLIAQQSHEELRKVLRA--NEVGAHFVFDTAFSRNFSLLESQREFVRRF 336
Query: 178 LSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
G PL S CPGW+CYAEK+HG + P++S +SPQQVMGSL+K A++ G+
Sbjct: 337 REQAGSPQALPLLASACPGWICYAEKTHGPLLTPHLSTARSPQQVMGSLVKDFFAQQQGL 396
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEE 292
P +YHVT+MPCYDKKLEASR DF+N E RDVDCV+T E+ LL E +L +
Sbjct: 397 APDKVYHVTVMPCYDKKLEASRPDFFNHEYQTRDVDCVLTTGEVYKLL--EEQGVSLPDL 454
Query: 293 KDGILDW-----PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
+ LD +E HR G GSGGY +V HA R+L + ++PLRN
Sbjct: 455 EPAPLDSLPSSVSAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVDELTYRPLRN 509
Query: 348 PDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI 406
D +E T G V L F A GFRNIQNL+QKL+R R PY ++E+MACP+GCLNGG Q+
Sbjct: 510 KDFQEVTLEREGQVLLHFAAAYGFRNIQNLVQKLRRGRCPYHYVEVMACPAGCLNGGGQL 569
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
R + S +E ++E + + P + + LY+ WL G+ + + +L+T YH +
Sbjct: 570 RAADMPS-RELLQQVEKLYASVRVEAPEDTPGVPELYRHWLQGEDSARASRLLHTQYHAV 628
Query: 467 PKNNIALNVKW 477
K + L+++W
Sbjct: 629 EKADSGLSIRW 639
>gi|221106794|ref|XP_002157697.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like [Hydra
magnipapillata]
Length = 462
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/482 (44%), Positives = 299/482 (62%), Gaps = 31/482 (6%)
Query: 5 RFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETN-GREEKLK 63
+FSG LQLTDL+DFI PSQ CIKP+ IEK + I+I+ D Y + N G + +LK
Sbjct: 3 KFSGALQLTDLNDFITPSQVCIKPVEIEKVK-KKGDTTIKIEGDSYYQVDVNSGEQVRLK 61
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
K I+L DCLACSGCITSAESVLI +QS ++ KV+ +N S N K +V+S++ Q
Sbjct: 62 KANITLNDCLACSGCITSAESVLIAEQSCLQLEKVLADN-----LSLANKKIVVISMSPQ 116
Query: 124 PVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGP 183
++S+ KF ++ +K+ FFK +G D + D +A SL+E++ EF+++F +
Sbjct: 117 SLVSIAVKFHVTVSDAYSKITTFFKDIGCDYIYDTNLARSISLLEMQKEFVEKFKNDKKI 176
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS CPGW+CYAEK+HGE ++PYIS+ KSPQQ+MGS++K L +KL P+ IYHVT+M
Sbjct: 177 MLTSACPGWICYAEKTHGELLIPYISQTKSPQQIMGSIVKQLLGKKLNKTPNEIYHVTIM 236
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE------LATTTLQEEKDGIL 297
PCYDKKLEASR DFYN+ RDVD VIT+ E+E +L + L+ + + E+ +
Sbjct: 237 PCYDKKLEASRTDFYNDIYNTRDVDLVITSSEVENMLQTKNIDFCGLSLSLIDEDYSFV- 295
Query: 298 DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC 357
DE +++L G GSGGY +V HA L + +KPLRN D +E
Sbjct: 296 ----DEQ--YQLLSHRGGGSGGYLEHVFLHASHSLFNVIPDQIIYKPLRNKDFQEVILEI 349
Query: 358 -GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G+V LRF A GFRNIQ+++QK+K+K+ YDF+EIMACP GCLNGG Q+R E V K
Sbjct: 350 DGEVKLRFAFAYGFRNIQSIVQKIKQKKCNYDFVEIMACPLGCLNGGGQVRAETVDDAK- 408
Query: 417 TALELETILCDLAK-SEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
+ ++L T DL K P + + LY + L+T YH + K ALN+
Sbjct: 409 SLIQLVTSTYDLLKPVNPLHDRKTKELYNQL--------SQSDLHTQYHAVKKMKTALNI 460
Query: 476 KW 477
+W
Sbjct: 461 QW 462
>gi|330792992|ref|XP_003284570.1| hypothetical protein DICPUDRAFT_27887 [Dictyostelium purpureum]
gi|325085484|gb|EGC38890.1| hypothetical protein DICPUDRAFT_27887 [Dictyostelium purpureum]
Length = 489
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 296/491 (60%), Gaps = 21/491 (4%)
Query: 2 ASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREE 60
+ RFS VL+LT+ D +I PSQ CIKP+ + S +KI I+ +G Y++ +G ++
Sbjct: 5 SEDRFSSVLKLTEFD-YIVPSQICIKPVETPEKSNDNGNSKIEIESNGRYVEISEDGTKK 63
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
+L+K I+L DCLACSGCITSAESVLIT QS +E + I N +++ + KTIV++L
Sbjct: 64 QLEKATITLNDCLACSGCITSAESVLITAQSIQEFLSNINSN-----TTDSDKKTIVVTL 118
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q SL A + +S QV+ KL FFK L +D + D + FSL+E EF+ R+
Sbjct: 119 SPQSRASLAAYYKISTLQVIKKLKTFFKSLNIDYLFDSSFSRDFSLLESAAEFVARYKKQ 178
Query: 181 GG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
G P+ +S CPGW+CYAEK+HG++ILPYIS KSPQQ+MG+L+K + ++K+ + PS
Sbjct: 179 LGEDQPLPMLSSACPGWICYAEKTHGDYILPYISTTKSPQQIMGTLVKYYFSKKINIEPS 238
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKD 294
+IYHVT+MPCYDKKLEASR DFYN+ +DVDCV++ E L++ L+E +
Sbjct: 239 NIYHVTIMPCYDKKLEASRNDFYNDIFKTKDVDCVLSTSEILDLFKEKNTDFIQLEESTE 298
Query: 295 GILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREAT 354
I ++ + + SGGY V +A ++L + +E+K RN D +E +
Sbjct: 299 AITSEYFNINQEQQEFYGVKGSSGGYLEFVFRYAAKELFNVDVNEIEYKVGRNQDFKEVS 358
Query: 355 FTC-GDVTLRFCIANGFRNIQNLIQKL-------KRKRLPYDFIEIMACPSGCLNGGAQI 406
G+ L F +A GFRNIQN+++K+ K LPY F+EIMACPSGC+NGG QI
Sbjct: 359 LEVNGEKVLNFALAYGFRNIQNIVRKIKTNTTIKKESALPYHFVEIMACPSGCINGGGQI 418
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
+ E + K LE E P++N ++ +YK WL G + L+T YH I
Sbjct: 419 KQEGIKENKAFLLETEENYNQQIIRNPQDNPQVQEIYKNWLNGCFSHDAITKLHTQYHRI 478
Query: 467 PKNNIALNVKW 477
K ALN+KW
Sbjct: 479 EKTTNALNIKW 489
>gi|281341565|gb|EFB17149.1| hypothetical protein PANDA_008943 [Ailuropoda melanoleuca]
Length = 482
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/490 (41%), Positives = 295/490 (60%), Gaps = 44/490 (8%)
Query: 24 ECIKPIPIEKPSGPRTGAKIRIQDDGAYIQET---------------------------- 55
+CIKP+ ++K G AKI I+DDG+Y Q +
Sbjct: 1 DCIKPMRVDKKPGSGV-AKIHIEDDGSYFQVSQVSSSPDDQKHVFAALSKGPVEYRVLCF 59
Query: 56 -NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTK 114
+G +KL+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ KV+ +A+K ++ +
Sbjct: 60 QDGGTQKLEKAKISLDDCLACSGCVTSAETVLITQQSHEELRKVL---DANKTAAPGQQR 116
Query: 115 TIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFL 174
+V+S++ Q SL +F L+ KL FFK++GV V D + FSL+E + EF+
Sbjct: 117 LVVVSVSPQSRASLATRFQLTPTDTAKKLTAFFKKIGVHYVFDTAFSRNFSLLESQREFV 176
Query: 175 DRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK 229
RF P+ TS CPGW+CYAEK+HG F++PY+S +SPQQVMGSL+K A++
Sbjct: 177 QRFRGQANSTQALPVLTSACPGWICYAEKTHGSFLIPYLSTARSPQQVMGSLVKDFFAQQ 236
Query: 230 LGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTL 289
+ P IYHVT+MPCYDKKLEASR+DF+++E RDVDCV+T E+ LL E +L
Sbjct: 237 QRLTPDRIYHVTVMPCYDKKLEASRSDFFSQEHQTRDVDCVVTTGEVFKLLEEE--GVSL 294
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
E + LD + + G GSGGY +V HA R+L V ++PLRN D
Sbjct: 295 LELEPAPLDSLCNSASAQEPTSHRGGGSGGYLEHVFQHAARELFGIHVDEVTYRPLRNKD 354
Query: 350 IREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
+E T G + L F A GFRNIQNL+QKL+R R PY ++E+MACP+GCLNGG Q++
Sbjct: 355 FQEVTLEKEGRILLHFAAAYGFRNIQNLVQKLRRGRCPYHYVEVMACPAGCLNGGGQLKA 414
Query: 409 EKVASPKETALELETILCDLAKSEPRENAT-LEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
+P + L+ +L + ++E E+A ++ LY+ WL G+ +++ +L+T YH +
Sbjct: 415 PD--APSKELLQHVEMLYGMVRTEAPEDAPGVQELYECWLQGEGSERAGRLLHTGYHAVE 472
Query: 468 KNNIALNVKW 477
K + L+++W
Sbjct: 473 KASSGLSIRW 482
>gi|198416311|ref|XP_002131190.1| PREDICTED: similar to Nuclear prelamin A recognition factor-like
protein (Iron-only hydrogenase-like protein 1) (IOP1)
[Ciona intestinalis]
Length = 478
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/492 (44%), Positives = 303/492 (61%), Gaps = 32/492 (6%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTG-AKIRIQDDGAYIQ-ETNGREE 60
+S FSG LQLTDL+DFI PSQECIKP+ ++K S P+ G +KI++ +DG+Y++ +T+G+ +
Sbjct: 2 TSNFSGALQLTDLNDFIAPSQECIKPVEVKK-SIPKKGLSKIKVSNDGSYMEVDTSGKSK 60
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
KL+K EI+L DCLACSGC+TSAE+VLI QS +E KV++EN K +S E K IV+S+
Sbjct: 61 KLQKAEITLNDCLACSGCVTSAETVLIAMQSKDEFYKVLKEN---KETSPEKRKIIVVSV 117
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q S+ AK L + + FFK LG D+VLD A +LV+ EF+ R+
Sbjct: 118 SPQSRASIAAKHKLDVRKAGKAIDAFFKSLGADIVLDTTFAEEIALVKTAEEFIQRYRDN 177
Query: 181 GG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ TS CPGW+CYAEK+HG+ LPYIS VKSPQQ++GSL+K ++ + P +
Sbjct: 178 QSKKSLPVLTSSCPGWICYAEKTHGDLTLPYISSVKSPQQILGSLVKETVSSHVNKTPDN 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATT-----TLQE 291
+YHVT+MPCYDKKLEASR DFY++ RDVD V+T+ E+E ++A E T +
Sbjct: 238 VYHVTVMPCYDKKLEASRQDFYDDIYSTRDVDLVLTSGEVEEMIAGECGTMDDLSIIPPQ 297
Query: 292 EKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR-NPDI 350
K LD DE H GSGGY H+V HA +QL + V +KP R N D
Sbjct: 298 LKAARLD--TDEPLSHGG-----GGSGGYLHHVYKHAAQQLFGVKVEEVVYKPARNNKDF 350
Query: 351 REATFTCGD--VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR- 407
R+ T D + L F GFR+IQNL+QK+KR R Y F+E+MACPSGCLNGG QI+
Sbjct: 351 RDVTLKDADGKILLNFASVYGFRSIQNLVQKMKRGRCNYHFVEVMACPSGCLNGGGQIKA 410
Query: 408 -NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
K+ ++ ++ +E RE++ + + K K + +T YH +
Sbjct: 411 PGGDRELQKDIFSSVQIAFNEIPPTEAREDSAVNQTIMDY----DITKSKQLFHTQYHAV 466
Query: 467 PKN-NIALNVKW 477
K+ ++LNVKW
Sbjct: 467 EKDETLSLNVKW 478
>gi|321470135|gb|EFX81112.1| hypothetical protein DAPPUDRAFT_211441 [Daphnia pulex]
Length = 480
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/494 (45%), Positives = 292/494 (59%), Gaps = 36/494 (7%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIE--KPSGPRTGAKIRIQDDGAYIQ-ETNGRE 59
SSRFS ++QLTDLDDFI PSQECIKP K AKI+I DDG Y Q G+
Sbjct: 4 SSRFSSIVQLTDLDDFINPSQECIKPAKTANVKQVTSAGSAKIQIGDDGTYTQINKEGQP 63
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLS 119
EKL+K +I+L DCLACSGCITSAESVLI QQ+H E +K+ +E +S + IV+
Sbjct: 64 EKLEKAQITLNDCLACSGCITSAESVLIGQQNHTEFLKLCKE--IQLSSESRMYDKIVVG 121
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL- 178
L+ QP+LS KF +S + AKL F++LG V DV LVE ++F+ RF
Sbjct: 122 LSSQPILSFANKFQVSPIEARAKLSALFRQLGAAKVFDVESFADMCLVECGHDFVQRFRE 181
Query: 179 ----SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
+ P+ S CPGW+CYAEK+HG +ILP+IS VKSPQQ+ + IK L +L
Sbjct: 182 KSTNATSVPVLASACPGWICYAEKTHGSWILPHISEVKSPQQIAATFIKDLLPNELQTDA 241
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQE-- 291
S + V +MPC+DKKLEASR+DF E+ +DVD VIT VE+E +L ++ T L
Sbjct: 242 SRLAVVMIMPCFDKKLEASRSDFLREDQQTKDVDFVITPVEIEQILEELDVEFTDLDSSH 301
Query: 292 ----EKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
K I W + +G+GSGGYA +VL A ++L + F+P++N
Sbjct: 302 VDHLSKAEIPTWN----------IPSGSGSGGYAEHVLRFAAKELYDVTLEHITFQPVKN 351
Query: 348 PDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI 406
DIREA G L I NGFRNIQNL+QK+KRK+ YD++E+MACPSGCLNGGAQ+
Sbjct: 352 SDIREAFLEMDGQQVLSVAICNGFRNIQNLVQKMKRKKRTYDYVEVMACPSGCLNGGAQL 411
Query: 407 RNEKVASPKETAL---ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
R E ET + LE + + K + E + L AWLG S ++ L T+Y
Sbjct: 412 RLES----NETKILLSNLEILHTKIEKHDIDETKA-DDLCHAWLGKSSIEERLKRLRTNY 466
Query: 464 HNIPKNNIALNVKW 477
H + K+ AL VKW
Sbjct: 467 HAVQKSTNALTVKW 480
>gi|426254961|ref|XP_004021138.1| PREDICTED: LOW QUALITY PROTEIN: cytosolic Fe-S cluster assembly
factor NARFL [Ovis aries]
Length = 491
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/466 (44%), Positives = 291/466 (62%), Gaps = 16/466 (3%)
Query: 20 GPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEKLKKVEISLTDCLACSGC 78
G SQ+CIKP+ +++ G AKI I+DDG+Y Q +G +KL+K +ISL DCLACSGC
Sbjct: 34 GYSQDCIKPMKVDRRPGSGV-AKIHIEDDGSYFQVSQDGGMKKLEKAKISLDDCLACSGC 92
Query: 79 ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQ 138
+TSAE+VLITQQSHEE+ KV+ A+K ++ + K +V+S++ Q SL +F L+
Sbjct: 93 VTSAETVLITQQSHEELRKVL---GANKTAAPDQQKLVVISVSPQSRASLAVRFQLNPTD 149
Query: 139 VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGP-----LFTSECPGWV 193
KL FFK++G V D + FSL+E + EF+ RF P + TS CPGW+
Sbjct: 150 TARKLTAFFKKIGAHYVFDTAFSRNFSLLESQREFVRRFRGQANPEQALPVLTSACPGWI 209
Query: 194 CYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEAS 253
CYAEK+HG +LP+IS +SPQQVMGSL+K A++ + P +YHVT+MPCYDKKLEAS
Sbjct: 210 CYAEKTHGNTLLPHISTARSPQQVMGSLVKDFFAQQQRLTPDKVYHVTVMPCYDKKLEAS 269
Query: 254 RADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVN 313
R DF+++E RDVDCVIT E+ LL E +L E + LD +
Sbjct: 270 RPDFFSQEHQTRDVDCVITTGEVFKLLEEE--GVSLSELEPAPLDSLCSSASAQEPTSXG 327
Query: 314 GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRN 372
G GSGGY +V HA ++L V ++PLRN D++E G V L F A GFRN
Sbjct: 328 GGGSGGYLEHVFRHAAQELFGIHVTEVTYRPLRNKDLQEVILEREGQVLLHFAAAYGFRN 387
Query: 373 IQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSE 432
IQNL+QKLKR R PY ++E+MACP+GCLNGG Q++ +P + L+ L L ++E
Sbjct: 388 IQNLVQKLKRGRCPYHYVEVMACPAGCLNGGGQLKAPD--TPGKELLQQVERLYGLVRTE 445
Query: 433 PRENAT-LEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
E+A ++ LY+ WL G +++ +L+TSYH + K L+++W
Sbjct: 446 APEDAPGVQELYERWLQGAGSERAGRLLHTSYHAVEKAGSGLSIRW 491
>gi|156376379|ref|XP_001630338.1| predicted protein [Nematostella vectensis]
gi|259511296|sp|A7SDA8.1|NARF_NEMVE RecName: Full=Probable cytosolic Fe-S cluster assembly factor
v1g210509
gi|156217357|gb|EDO38275.1| predicted protein [Nematostella vectensis]
Length = 441
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 264/405 (65%), Gaps = 11/405 (2%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
++ FSG LQLT+LDDFI PSQECIKP+ IEK G + AKI+I+ DG+Y+Q +G + K
Sbjct: 2 AAHFSGALQLTNLDDFITPSQECIKPVKIEKKPGAKGLAKIKIESDGSYVQLSEDGGKSK 61
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAH-KASSNENTKTIVLSL 120
L+K EI+L DCLACSGCIT+AESVLITQQS +E+ K++ N K + K +V+S+
Sbjct: 62 LQKAEITLNDCLACSGCITTAESVLITQQSQDELFKILDSNRKLVKEGKGDVQKLVVISI 121
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS- 179
+ Q S+ AKF L+ KL FFK+LGV V D A FSL E + EF+ RF +
Sbjct: 122 SPQSRASIAAKFNLTINDAAKKLSAFFKQLGVHYVFDTTFARDFSLAESQREFVRRFRAY 181
Query: 180 -----GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
G P+ S CPGW+CYAEK+HG++ILPYIS KSPQQ+MGSL+K HLA +G P
Sbjct: 182 QQGDEGCTPMLASACPGWMCYAEKTHGDYILPYISSTKSPQQIMGSLVKDHLASVVGKSP 241
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKD 294
+YHV +MPC+DKKLEASR DFYN+ RDVDCVI+ VE+E ++ + + +
Sbjct: 242 DSVYHVCVMPCFDKKLEASRDDFYNDMYSTRDVDCVISTVEVETMIQDHCPDFNSIDPVE 301
Query: 295 GILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREAT 354
LD + + +G GSGG+ ++ +A R+L + V+ +K LRN D RE T
Sbjct: 302 --LDKLYCSSDSGDFFGHSGGGSGGFLEHIFKYASRELFDEKVDVLTYKTLRNKDFREVT 359
Query: 355 FTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSG 398
G L+F A GFRNIQNL+QKLKR + PY F+E+MACPSG
Sbjct: 360 LQVDGKDVLKFAAAYGFRNIQNLVQKLKRGKSPYHFVEVMACPSG 404
>gi|196015869|ref|XP_002117790.1| hypothetical protein TRIADDRAFT_61804 [Trichoplax adhaerens]
gi|190579675|gb|EDV19766.1| hypothetical protein TRIADDRAFT_61804 [Trichoplax adhaerens]
Length = 447
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 212/482 (43%), Positives = 286/482 (59%), Gaps = 47/482 (9%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
FS VL++ D+DDFI PSQECIKPI + E + +KV
Sbjct: 3 FSSVLKIADVDDFINPSQECIKPITSKLDK-----------------HEKYNHRSQSEKV 45
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN-TKTIVLSLAIQP 124
+ISL DCLACSGCITSAESVLI++QS EE ++ +N + + E+ KTI++S++ Q
Sbjct: 46 KISLNDCLACSGCITSAESVLISKQSKEEFYAILDKNQRLQETHQESRMKTIIVSISPQS 105
Query: 125 VLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+L + L Q+ L FK+ LG V D A FSL+E + EF+DR+ S
Sbjct: 106 RAALAVNYNLDINQIGKMLAATFKKVLGASYVFDATFARDFSLIESQREFIDRYCSSSPC 165
Query: 183 --PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+F S CPGW+CYAEK HG+FILPY+S VKSPQQ+MGSLIK + A ++G PS IYHV
Sbjct: 166 KLPVFASACPGWICYAEKIHGKFILPYLSAVKSPQQIMGSLIKDYFANQIGKRPSDIYHV 225
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
T+MPCYDKKLEASR DFYNE L DVDCV+T+ E+ + NE + + LD P
Sbjct: 226 TVMPCYDKKLEASRNDFYNESLNAADVDCVLTSGEVMEIF-NERGCVVVNGTSEN-LDRP 283
Query: 301 W---DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC 357
+ DE+N +L +G GSGGY NV A ++ + + +K +RN D RE T
Sbjct: 284 FVSVDENN--EVLTHDGGGSGGYLENVFKTAAAEIFQLKIQNMIYKTVRNKDFREVILTI 341
Query: 358 -GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G L+ I GFRNIQN++Q++KR + YD++EIMACP GCLNGG Q PK
Sbjct: 342 DGKSVLKGAIVYGFRNIQNIVQRMKRGKCLYDYVEIMACPGGCLNGGGQ--------PK- 392
Query: 417 TALELETIL-CDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
++L++ L L K E N+ E WL G + K + ML T+Y++ ++ A++V
Sbjct: 393 --IDLDSNLRLHLMKLEKCYNSAGE-----WLDGSDSYKARKMLYTTYYDKSQSQNAISV 445
Query: 476 KW 477
KW
Sbjct: 446 KW 447
>gi|328868553|gb|EGG16931.1| nuclear prelamin A recognition factor-like protein [Dictyostelium
fasciculatum]
Length = 493
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 209/503 (41%), Positives = 300/503 (59%), Gaps = 39/503 (7%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQET-NGREEK 61
+ +FS VL+LT+LDDFI PSQECIKP+ I+K + T + I+ DG+Y++ T +G + +
Sbjct: 2 AEKFSSVLKLTELDDFITPSQECIKPVIIDKKN---TSTQFTIESDGSYVETTSDGEKVQ 58
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
++K I+L DCLACSGCITSAESVLI+ QS E V++ K S +V+S++
Sbjct: 59 MEKATITLNDCLACSGCITSAESVLISAQSTVEFSNVLKSIAESKPDS-----IVVVSIS 113
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL F + Q+ KL F K +GV+ V D + F+L+E EF+ R+
Sbjct: 114 PQSRASLANHFGIDSMQLHRKLVTFLKSIGVNHVFDTSFSREFALIESAEEFIARYKQTY 173
Query: 182 G---PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
P+ S CPGW+CYAEK+HG+++LPYIS KSPQQ+MG+L+K +L++K+ PS+IY
Sbjct: 174 DKPLPMLASACPGWICYAEKTHGDYVLPYISTTKSPQQIMGTLVKYYLSKKINTLPSNIY 233
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD 298
HVT+MPCYDKKLEASR+DFYN+ +DVDCV++ E+ LL E L + ++ LD
Sbjct: 234 HVTIMPCYDKKLEASRSDFYNDVFKTKDVDCVLSTSEVLELL-KEHGDVDLLKLEEATLD 292
Query: 299 --------WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE-SPVVEFKPLRNPD 349
+ P + L V G+ +GGY + A ++L E +E+K RN D
Sbjct: 293 NSIFNNVIFNQQTGQPEKFLGVTGS-TGGYFEYLFRRAAKELFGKEIEGEIEYKVGRNTD 351
Query: 350 IREATFTC-GDVTLRFCIANGFRNIQNLIQKLK-------RKRLPYDFIEIMACPSGCLN 401
+EA+ G L F A GFRNIQN+++K+K +K Y F+E+MACPSGC+N
Sbjct: 352 FKEASLEVDGKKVLSFAKAYGFRNIQNIVRKIKTTTASSSKKEPQYHFVEVMACPSGCIN 411
Query: 402 GGAQIRNEKVASPKETALELET----ILCDLA-KSEPRENATLE--HLYKAWLGGKSTDK 454
GG QI+ S +E L +E DL+ +S + +TLE +Y W+ G +
Sbjct: 412 GGGQIKAAS-GSLREQKLLIEQSEQKYYQDLSIQSYEQLPSTLEIKDIYDQWMNGPFSLD 470
Query: 455 GKHMLNTSYHNIPKNNIALNVKW 477
K L+T YH I K+ AL++KW
Sbjct: 471 AKTKLHTQYHMIEKSKNALSIKW 493
>gi|320164863|gb|EFW41762.1| nuclear prelamin A recognition factor-like protein [Capsaspora
owczarzaki ATCC 30864]
Length = 607
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 225/608 (37%), Positives = 297/608 (48%), Gaps = 132/608 (21%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAK---IRIQDDGAYIQ---- 53
MA +FSG LQLTDLDDFI PS ECIKP+P+++ + A IR++ DG+Y+Q
Sbjct: 1 MAVKQFSGALQLTDLDDFITPSLECIKPVPVDRLPASQAAATPGTIRVEADGSYVQLTAS 60
Query: 54 ----ETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNA----- 104
+ KLK+ I+L DCLACSGCITSAESVLIT QS EE+ +V+ N A
Sbjct: 61 ATSASASPTATKLKRAAITLNDCLACSGCITSAESVLITSQSTEELDRVLAANTAACREA 120
Query: 105 --------------------------------------HKASSNENT----------KTI 116
H + T K +
Sbjct: 121 HMDPPTPTPTPTTTATTATTTTTTTTTTTTTSPMDTSSHSGPATARTLVPVPLVPGEKLV 180
Query: 117 VLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR 176
V+SL+ Q +L AKF LS E V ++ + G LVLD + FSL+E EF+DR
Sbjct: 181 VVSLSPQARAALAAKFNLSIETVHQRIVAALRSFGAHLVLDTTFSREFSLIETRREFIDR 240
Query: 177 FLSGGG------------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
+ + P+ TS CPGWVCYAEK+HG F+LPYIS KSPQQV GS++K
Sbjct: 241 YRAAQSQSTSKVQVTDIFPMLTSACPGWVCYAEKTHGTFVLPYISAAKSPQQVSGSIVKD 300
Query: 225 HLAEKLGVH-------PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELE 277
+L + L V P IYHV++MPCYDKKLEASR DFY+E RDVDCV+T ELE
Sbjct: 301 YLPKILRVQADGKPVLPDRIYHVSIMPCYDKKLEASRQDFYSEMYSTRDVDCVLTTGELE 360
Query: 278 VLLANELATTTLQEEKDGILDWPW-----DEHNP----HRMLLVNGTGSGGYAHNVLSHA 328
LL + A Q D P + P R++ G GSGGY + + HA
Sbjct: 361 QLLEDR-AVDLRQPLTVAPRDIPALSALEAQFTPVDAQGRIVSHAGGGSGGYLEHTMRHA 419
Query: 329 IRQL--------------------------------------CPGESPVVEFKPLRNPDI 350
R+L G+ + ++ ++N D
Sbjct: 420 ARELFGIESITIHAASNASTASSSSADAVPMEVAEASLVASSTAGDQTNLTYRIVKNKDF 479
Query: 351 REATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
+E T G V LRF A GF+NIQNL+QK+KR + Y F+EIMACPSGCLNGG QI+ +
Sbjct: 480 KELTLERDGQVLLRFAAAYGFKNIQNLVQKIKRNQCQYHFVEIMACPSGCLNGGGQIKPD 539
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
+ S K+ +E EP +A++E + W ++L T YH + K
Sbjct: 540 EGESAKDFLSRVELAYLSQPSREPGVDASVERIESEWFRDVDEASRANILRTKYHAVEKF 599
Query: 470 NIALNVKW 477
L +KW
Sbjct: 600 VSELLIKW 607
>gi|348537870|ref|XP_003456416.1| PREDICTED: cytosolic Fe-S cluster assembly factor narfl-like
isoform 2 [Oreochromis niloticus]
Length = 411
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 189/414 (45%), Positives = 258/414 (62%), Gaps = 19/414 (4%)
Query: 74 ACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFA 133
+ SGCITSAESVLITQQSHEE+ KV+R N K ++ KT+V+S++ Q SL A +
Sbjct: 7 STSGCITSAESVLITQQSHEELFKVLRRN---KVANETEQKTVVVSVSPQARASLAAHYN 63
Query: 134 LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-----SGGGPLFTSE 188
LS + +L FFK LGV V D + FSL+E + EF++RF S P+ TS
Sbjct: 64 LSSSEAGRRLTSFFKGLGVHHVFDTSFSRTFSLLESQREFVERFQRKQQDSKALPMLTSA 123
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CPGW+CYAEK+HGE+ILPYIS +SPQQ+MGSL+K++ A + G+ P IYHV +MPC+DK
Sbjct: 124 CPGWICYAEKTHGEYILPYISTTRSPQQMMGSLVKSYFAGQQGLSPQQIYHVAVMPCFDK 183
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
KLEASR+DFY R+VDCVIT+ E+ +L E +L + + D +
Sbjct: 184 KLEASRSDFYLTNAETREVDCVITSGEVLKMLEEE--NVSLNDLESAAPDTMFSSFCGDE 241
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIA 367
L G+GSGGY H+V ++A + L E + +K LRN D +E + G V L F A
Sbjct: 242 FLSHAGSGSGGYLHHVFTYAAKHLFGEEVKNLTYKTLRNKDFQEVSLEKDGVVLLCFASA 301
Query: 368 NGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCD 427
GFRNIQNL+QKLKR + PY F+E+MACPSGCLNGG Q++ + KE ++E D
Sbjct: 302 YGFRNIQNLVQKLKRGKSPYHFVEVMACPSGCLNGGGQVKPSTGQNQKELLQKVE----D 357
Query: 428 LAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
L K+E P ++A + LY++WL ++ K +L+T YH + K L +KW
Sbjct: 358 LYKAERPLLPEDDARVAELYQSWLNSVGDERAKELLHTQYHTVEKMTNGLTMKW 411
>gi|150387423|sp|A2RRV9.1|NARFL_DANRE RecName: Full=Cytosolic Fe-S cluster assembly factor narfl;
AltName: Full=Nuclear prelamin A recognition factor-like
protein
gi|124297681|gb|AAI31875.1| Zgc:158422 [Danio rerio]
Length = 411
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 187/410 (45%), Positives = 254/410 (61%), Gaps = 11/410 (2%)
Query: 74 ACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFA 133
+ SGCITSAESVLITQQSHEE+ +V+R N K S+ K +V+S++ Q SL A +
Sbjct: 7 SISGCITSAESVLITQQSHEELYRVLRHN---KQVSSTEQKVVVVSVSPQSRASLAAHYG 63
Query: 134 LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSE 188
+ +V KL F K LGV V D + FSL+E + EFL RF P+ S
Sbjct: 64 IGSSEVARKLTSFLKHLGVHHVFDTAFSRSFSLIESQREFLQRFSQREADKKALPMLASA 123
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CPGW+CYAEK+HGEFILPYIS +SPQQ+MGSL+K + A + GV P IYHVT+MPCYDK
Sbjct: 124 CPGWICYAEKTHGEFILPYISTTRSPQQIMGSLVKGYFASQKGVSPQMIYHVTVMPCYDK 183
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
KLEASR DFY E R+VDCVIT+ E+ +L E +L++ + LD +
Sbjct: 184 KLEASRPDFYLSEHETREVDCVITSGEVLKMLEEE--KVSLRDVQPAPLDTMFSNVCGEE 241
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIA 367
+L G+GSGGY H++ HA +QL + + +K ++N D +E T G V L+F
Sbjct: 242 LLGHAGSGSGGYLHHIYKHAAKQLFGVDVDELTYKTMKNKDFQEVTLEKDGQVLLKFAAV 301
Query: 368 NGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCD 427
GFRNIQNL+QKLKR + PY F+E+MACPSGCLNGG Q++ S KE ++E +
Sbjct: 302 YGFRNIQNLVQKLKRGKSPYHFVEVMACPSGCLNGGGQLKPSADQSNKELLQQVEEVYRS 361
Query: 428 LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
S P +++ + LY++WL +K + +L+T YH + K L++KW
Sbjct: 362 EHPSVPEDDSQVAELYQSWLESVGEEKARQLLHTQYHAVEKTANGLSIKW 411
>gi|167518139|ref|XP_001743410.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778509|gb|EDQ92124.1| predicted protein [Monosiga brevicollis MX1]
Length = 476
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/480 (41%), Positives = 294/480 (61%), Gaps = 41/480 (8%)
Query: 10 LQLTDLDDFIGPSQECIKPIPIEKPSGPRT-GAKIRIQDDGAYIQ-ETNGREEKLKKVEI 67
L+LTDL+DFIGPSQ CIKP+ + +P G GA+I I+ DG+Y+Q +G++ KL++ +I
Sbjct: 4 LRLTDLNDFIGPSQACIKPVQVNRPEGDAAKGARIEIEPDGSYVQLAQDGKKTKLERAKI 63
Query: 68 SLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLS 127
+L DCLACSGCITSAESVL+ Q+H+E+ + +RE KA+ N T+V+ LA Q S
Sbjct: 64 TLNDCLACSGCITSAESVLVQMQNHDELRRALRE----KAT---NGTTVVVMLAQQVYAS 116
Query: 128 LGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG-GPLFT 186
+ AK+ LS + K+ + ++LGVD V DV IA +L +++ E+ R +GG P+ +
Sbjct: 117 MAAKYGLSSHAALFKISTYLRQLGVDAVYDVSIARSIALRQVQQEYSHRRQTGGVFPILS 176
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGW+CYAEKSHG +ILP+IS VKSPQQ+MGS++K + + GV P ++ +MPC+
Sbjct: 177 SACPGWICYAEKSHGSYILPHISTVKSPQQIMGSMLKRIIPRQNGVRPDQVFVTAIMPCF 236
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD--WPWDEH 304
DKKLEASR+DFY++EL +DVDCVI A ELE++L + L + + LD P D
Sbjct: 237 DKKLEASRSDFYSDELRTKDVDCVIAATELEIMLLED--DVDLSQVPESPLDSLVPGDTG 294
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDV---T 361
P + G+ SGGY H+V+ A P S +E K R D +EA +C D T
Sbjct: 295 EPLSHI---GSTSGGYLHHVVERAAD--APFASLPLEAK--RGVDFQEA--SCQDAQGQT 345
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA--- 418
F + GF++IQ++++++KRK YD++E+MACP GC NGG Q+R E+V +
Sbjct: 346 RTFALGYGFKSIQSVLRRIKRKNCSYDYVEVMACPRGCTNGGGQLRPEEVGNSASAVSSQ 405
Query: 419 -------LELETILCDLAKSEPRENATLEHLYKAW-----LGGKSTDKGKHMLNTSYHNI 466
E E ++ + E+ ++ +Y A G + + + + +T+YH +
Sbjct: 406 AARDALLTETERTYDEIRRIRADEDVRVQAVYAALQLTPGTNGLLSPEEQALFHTAYHKV 465
>gi|66803034|ref|XP_635360.1| nuclear prelamin A recognition factor-like protein [Dictyostelium
discoideum AX4]
gi|74851536|sp|Q54F30.1|NARF_DICDI RecName: Full=Probable cytosolic Fe-S cluster assembly factor narfl
gi|60463676|gb|EAL61858.1| nuclear prelamin A recognition factor-like protein [Dictyostelium
discoideum AX4]
Length = 522
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 209/522 (40%), Positives = 303/522 (58%), Gaps = 55/522 (10%)
Query: 5 RFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEKLK 63
+FS VL+LT+ D +I PSQ CIKP+ IEK S +KI+I+ DG Y++ +G ++ L+
Sbjct: 7 KFSSVLKLTEFD-YIVPSQICIKPVEIEK-SNDSGNSKIQIESDGRYVEISEDGTKKSLE 64
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
K I+L DCLACSGCITSAESVLIT QS E + + NN + +E KTIV++L+ Q
Sbjct: 65 KATITLNDCLACSGCITSAESVLITAQSISEFLLNVNNNNDSNNNQDEK-KTIVITLSPQ 123
Query: 124 PVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF----LS 179
SL + F +S VV KL FFK+L ++ + D + FSL+E EF+ R+ ++
Sbjct: 124 SRASLASHFKISTLSVVKKLKTFFKKLNINYLFDSSFSRDFSLLESAAEFVARYKKTYIN 183
Query: 180 GGG------------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA 227
P+ +S CPGW+CYAEK+HGEFILP+IS KSPQQ+MG+L+K +
Sbjct: 184 NNNDEETGKLEPFPLPMLSSACPGWICYAEKTHGEFILPFISTTKSPQQIMGTLVKYYFT 243
Query: 228 EKL--------------------GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDV 267
EK+ + PS+IYHVT+MPCYDKKLEASR DFYN+ +DV
Sbjct: 244 EKILDNNTNNNNNNNNNNNNNNSKIKPSNIYHVTIMPCYDKKLEASRNDFYNDIFKTKDV 303
Query: 268 DCVITAVE-LEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLS 326
DCV++ E L++ E+ +L+E D ++ + + +P SGGY +
Sbjct: 304 DCVLSTTEILDLFKEKEIDFLSLEE--DNSIEEQFFQLSPSNQFYSINGSSGGYLEFIYK 361
Query: 327 HAIRQLCPGE--SPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRK 383
+A ++L + P +++K RN D +E + G L F A GFRNIQN+++K+K
Sbjct: 362 YAAKELFNVDIVEP-IQYKIGRNQDFKEVSLEIDGKKVLNFAQAYGFRNIQNIVRKIKTN 420
Query: 384 -------RLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILC-DLAKSEPRE 435
YDF+EIMACPSGC+NGG QI+++ + K L+ E ++ +P +
Sbjct: 421 ITTKKDTNSQYDFVEIMACPSGCINGGGQIKSDAIKENKAILLDSEEKYNENVIFRQPID 480
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
N +++++Y WL G + K L+T YH I K ALN+KW
Sbjct: 481 NQSVQNIYNTWLNGCFSTDSKTNLHTQYHRIEKTTNALNIKW 522
>gi|302762170|ref|XP_002964507.1| hypothetical protein SELMODRAFT_81861 [Selaginella moellendorffii]
gi|300168236|gb|EFJ34840.1| hypothetical protein SELMODRAFT_81861 [Selaginella moellendorffii]
Length = 458
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 200/482 (41%), Positives = 285/482 (59%), Gaps = 36/482 (7%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL--- 62
FS L+L DL+DFI PSQ C+ + KI + +Y+ + + + +
Sbjct: 3 FSTALKLADLNDFIAPSQACVVSL---------NSKKIEV----SYVPSSFDQTKNVAVE 49
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
K V+++L DCLACSGCITSAE+V++ QS EE + + +++ K++++SL+
Sbjct: 50 KPVKVTLHDCLACSGCITSAETVMLEHQSIEEFLNRL----------SDSGKSVIVSLSP 99
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
Q SL A + LS QV KL GF K LGV V D + SL+E EF++R+
Sbjct: 100 QSRASLAAYYGLSQLQVFRKLTGFLKSLGVKAVFDTSCSRDLSLIESCVEFVNRYKERQL 159
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ TS CPGW+CYAEK+ ILPYISRVKSPQQ MG+++K H LG+ P +YHVT+
Sbjct: 160 PVVTSACPGWICYAEKTLDAEILPYISRVKSPQQAMGAVLKRHACYALGLRPEDVYHVTV 219
Query: 243 MPCYDKKLEASRADFY----NEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGIL 297
MPCYDKKLEASR DF N G +VD V+T+ E L++L + ++ +L+E+ L
Sbjct: 220 MPCYDKKLEASRDDFIFAVENGASGLAEVDSVLTSGEILDLLQSRDIDFMSLEEQPLDKL 279
Query: 298 DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC 357
DE + V G GSGGYA V +A + L E VEF+ +RN D RE
Sbjct: 280 LTNVDEQG--HLYGVPG-GSGGYAECVFKYAAKHLFGAEPDRVEFQVVRNADFREVKLEV 336
Query: 358 -GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G+V L+F +A GFRNIQNL++K++ K+ Y ++EIMACPSGCLNGG QI+ ++ S KE
Sbjct: 337 DGEVRLKFALAYGFRNIQNLVRKIRLKKCEYQYVEIMACPSGCLNGGGQIKPKEGQSAKE 396
Query: 417 TALELET-ILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
LE+ L ++ +P +N ++ LY +WLG ++ K +L+T YH+ KN +
Sbjct: 397 LIQNLESAYLQEVEMKDPFDNPIVKSLYDSWLGEPASLSSKRVLSTEYHHREKNVTSQLA 456
Query: 476 KW 477
W
Sbjct: 457 NW 458
>gi|302820708|ref|XP_002992020.1| hypothetical protein SELMODRAFT_186507 [Selaginella moellendorffii]
gi|300140142|gb|EFJ06869.1| hypothetical protein SELMODRAFT_186507 [Selaginella moellendorffii]
Length = 458
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 200/482 (41%), Positives = 285/482 (59%), Gaps = 36/482 (7%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL--- 62
FS L+L DL+DFI PSQ C+ + KI + +Y+ + + + +
Sbjct: 3 FSTALKLADLNDFIAPSQACVVSL---------NSKKIEV----SYVPSSFDQTKNVAVE 49
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
K V+++L DCLACSGCITSAE+V++ QS EE + + +++ K++++SL+
Sbjct: 50 KPVKVTLHDCLACSGCITSAETVMLEHQSIEEFLNRL----------SDSGKSVIVSLSP 99
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
Q SL A + LS QV KL GF K LGV V D + SL+E EF++R+
Sbjct: 100 QSRASLAAYYGLSQLQVFRKLTGFLKSLGVKAVFDTSCSRDLSLIESCVEFVNRYKERQL 159
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ TS CPGW+CYAEK+ ILPYISRVKSPQQ MG+++K H LG+ P +YHVT+
Sbjct: 160 PVVTSACPGWICYAEKTLDAEILPYISRVKSPQQAMGAVLKRHACYALGLRPEDVYHVTV 219
Query: 243 MPCYDKKLEASRADFY----NEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGIL 297
MPCYDKKLEASR DF N G +VD V+T+ E L++L + ++ +L+E+ L
Sbjct: 220 MPCYDKKLEASRDDFIFALENGASGLAEVDSVLTSGEILDLLQSRDIDFMSLEEQPLDKL 279
Query: 298 DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC 357
DE + V G GSGGYA V +A + L E VEF+ +RN D RE
Sbjct: 280 LTNVDEQG--HLYGVPG-GSGGYAECVFKYAAKHLFGAEPDRVEFQVVRNADFREVKLEV 336
Query: 358 -GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G+V L+F +A GFRNIQNL++K++ K+ Y ++EIMACPSGCLNGG QI+ ++ S KE
Sbjct: 337 DGEVRLKFALAYGFRNIQNLVRKIRLKKCEYQYVEIMACPSGCLNGGGQIKPKEGQSAKE 396
Query: 417 TALELET-ILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
LE+ L ++ +P +N ++ LY +WLG ++ K +L+T YH+ KN +
Sbjct: 397 LIQNLESAYLQEVEMKDPFDNPIVKSLYDSWLGEPASLSSKRVLSTEYHHREKNVTSQLA 456
Query: 476 KW 477
W
Sbjct: 457 NW 458
>gi|417410627|gb|JAA51783.1| Putative nuclear architecture related protein, partial [Desmodus
rotundus]
Length = 429
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/428 (43%), Positives = 261/428 (60%), Gaps = 12/428 (2%)
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
+G KL+K ISL DCLACSGC+TSAE+VLITQQSHEE+ K++ +A+K ++ +
Sbjct: 8 DGGTRKLEKARISLDDCLACSGCVTSAETVLITQQSHEELRKIL---DANKTAAPGQQRL 64
Query: 116 IVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
+V+S++ Q SL +F L+ KL FFK+LG V D + FSL+E + EF+
Sbjct: 65 VVISVSPQSRASLAVRFQLNPTDTARKLTAFFKKLGAHYVFDTAFSRNFSLLESQREFVR 124
Query: 176 RFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
RF P+ TS CPGW+CYAEK+HG I+PYIS +SPQQVMGSL+K A++
Sbjct: 125 RFRGQATCKHALPVLTSACPGWICYAEKTHGSAIIPYISTARSPQQVMGSLVKDFFAQQQ 184
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQ 290
V P IYHVT+MPCYDKKLEASR DF+ +E RDVDCVIT E+ LL E +L
Sbjct: 185 RVTPDKIYHVTVMPCYDKKLEASRPDFFRQEHQTRDVDCVITTGEVFKLLEEE--GVSLA 242
Query: 291 EEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI 350
E + LD + + +G GSGGY +V HA ++L V ++ +
Sbjct: 243 ELEPAPLDSLYSNMSAQEPTSHSGGGSGGYLEHVFRHAAQELFGIHVDKVTYRXXXXXEG 302
Query: 351 REAT-FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
++ T T L F A GFRNIQNL+QKLKR R PY ++E+MACPSGCLNGG Q++
Sbjct: 303 QQVTQQTEARSPLHFAAAYGFRNIQNLVQKLKRGRCPYHYVEVMACPSGCLNGGGQLKAP 362
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
+V KE +E + + P + ++ LY+ WL G+ +++ +L+TSYH + K
Sbjct: 363 EVPD-KELLQHVERLYSMVRTEAPEDVPGVQELYQHWLHGEGSERTGCLLHTSYHAVEKA 421
Query: 470 NIALNVKW 477
+ +L+++W
Sbjct: 422 SSSLSIRW 429
>gi|312384015|gb|EFR28853.1| hypothetical protein AND_02688 [Anopheles darlingi]
Length = 327
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 168/329 (51%), Positives = 223/329 (67%), Gaps = 7/329 (2%)
Query: 154 LVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTSECPGWVCYAEKSHGEFILPYISRV 211
+V+D IA +L+E NEF++R+ + P+ S CPGWVCYAEK+HG FILPYIS
Sbjct: 1 MVVDTKIADDLALIESRNEFVERYNTNRKSLPMLASSCPGWVCYAEKTHGNFILPYISTT 60
Query: 212 KSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVI 271
+SPQQ+MG L+K +LA+ +G IYHVT+MPCYDKKLEASR DF+NE DVDCVI
Sbjct: 61 RSPQQIMGMLVKQYLAKIIGTTSDRIYHVTVMPCYDKKLEASREDFFNEVENSHDVDCVI 120
Query: 272 TAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIR 330
T++E+E +L + L TLQ + +DWPW P + + +GSGGY+ ++L +A R
Sbjct: 121 TSIEIEQMLES-LGLETLQLVEKCPIDWPWPTARPPAFVWSHESSGSGGYSEHILKYAAR 179
Query: 331 QLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDF 389
+L VEFKPLRN D+REA G V LRF IANGFRNIQN++QKLKR + YD+
Sbjct: 180 KLFNLPVDAVEFKPLRNNDMREAVLEHEGKVVLRFAIANGFRNIQNMVQKLKRGKSTYDY 239
Query: 390 IEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGG 449
+EIMACPSGCLNGGAQ+R + +P+E ELE + L +S P EN +++HLY +L
Sbjct: 240 VEIMACPSGCLNGGAQVRPDGGKTPRELTAELELMYRSLPQSNP-ENESVQHLYTTFLDS 298
Query: 450 K-STDKGKHMLNTSYHNIPKNNIALNVKW 477
+K + +L+T+YH I K N ALN+KW
Sbjct: 299 DGDNNKRQSLLHTTYHQIEKINSALNIKW 327
>gi|339233454|ref|XP_003381844.1| nuclear prelamin A recognition factor [Trichinella spiralis]
gi|316979294|gb|EFV62102.1| nuclear prelamin A recognition factor [Trichinella spiralis]
Length = 497
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 191/489 (39%), Positives = 279/489 (57%), Gaps = 32/489 (6%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S FSG ++LTDL+DFI PSQ CIKPI ++K S ++R D I +++ + L
Sbjct: 27 SMSFSGTVRLTDLNDFIAPSQNCIKPI-LDKRSTANQSERMRFDRDE--INKSSQEKRIL 83
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE-NNAHKASSNENTKTIVLSLA 121
K V ++L DCLACSGCITSAE+VLI QQ +E +K+I E +N +K S E V+S++
Sbjct: 84 KPVSVTLDDCLACSGCITSAETVLIEQQGPKEFLKMIEEFSNDNKVISKELKSLFVVSIS 143
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A + L+ E KLC F + LG D+ LD A FSL+ EF+D +
Sbjct: 144 PQSRASLAASYNLTVEVTQRKLCAFLRSLGADICLDTTFARNFSLLATAEEFVDYYRKNY 203
Query: 182 ----------GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
PL T+ CPGWVCYAEKS + ++P +S+V+SPQ + GS +K +L++ +
Sbjct: 204 LNCTSTSLSISPLITAICPGWVCYAEKSVSDVVIPLMSKVRSPQAIAGSFVKDYLSKTMN 263
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQE 291
+ P+ I HVT+MPC+DKKLEASR+ F ++ R+VD V++ ++ +++ E
Sbjct: 264 ILPNRIRHVTIMPCFDKKLEASRSAFLADDGSSREVDLVLSTSDIYMIVI---------E 314
Query: 292 EKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
D L +D + + + G+GSGGY V +A ++L + VE+ RN DI+
Sbjct: 315 NSD--LLCLFDIFDENTLYNHEGSGSGGYLEFVFKYAAKELFNLDVSSVEYVAQRNKDIQ 372
Query: 352 EATFTCGD-VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
EA + V + GFRNIQNLI+K++ + Y F+E+MACPSGCLNGG QIR
Sbjct: 373 EARLIHDNKVLFHMALCYGFRNIQNLIRKIRAGKCAYHFVEVMACPSGCLNGGGQIR--- 429
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGK-STDKGKHMLNTSYHNIPKN 469
K T+ +E + L +P E L+ L WLGG ++K ML T Y +
Sbjct: 430 -GIDKMTSNVVEELYHSLPTVQPGEWPNLKLLINRWLGGSLQSEKANRMLKTQYQAVKST 488
Query: 470 -NIALNVKW 477
++ N++W
Sbjct: 489 KSMRFNLEW 497
>gi|427796411|gb|JAA63657.1| Putative nuclear architecture related protein, partial
[Rhipicephalus pulchellus]
Length = 390
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/409 (44%), Positives = 239/409 (58%), Gaps = 31/409 (7%)
Query: 81 SAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVV 140
SAE+VLITQQS E++ V++EN E K IV+++A Q S K+++ +E
Sbjct: 1 SAETVLITQQSSEQLYTVLKEN---AELPEEKRKLIVVTVAPQVAASFAGKYSVGYESAS 57
Query: 141 AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCY 195
AKL GFFK LG VLD F+L+E+ +F++R+ PL S CPG+VCY
Sbjct: 58 AKLTGFFKTLGAHYVLDSTFGREFALIEVLRDFIERWARRDSDRTALPLLASSCPGFVCY 117
Query: 196 AEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRA 255
AEK+HG+ +LP+ISR +SPQQ+MGSL+K LA +LG IYHV++MPCYDKKLEASRA
Sbjct: 118 AEKTHGDVLLPHISRARSPQQIMGSLVKKFLASRLGKKADQIYHVSVMPCYDKKLEASRA 177
Query: 256 DFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGT 315
DFY+E RDVDCVIT+VE+E +LA E + E D + R G+
Sbjct: 178 DFYDEIYSTRDVDCVITSVEVESMLAKE--DKSFDELPSAASDSLFRCEVGGRPYRHPGS 235
Query: 316 GSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQ 374
GSGGY V A R L V FK LRN D RE T G+ LRF IANGFRNIQ
Sbjct: 236 GSGGYCEYVFVEAARLLFHRRPEEVVFKTLRNQDFREVTLELGGETVLRFAIANGFRNIQ 295
Query: 375 NLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR 434
N++QK+KR + PY FIEIMACP+GCLNGGAQ+R + S +L +
Sbjct: 296 NVVQKMKRAKCPYHFIEIMACPAGCLNGGAQLRPDDGDS--------RALLRRVX----- 342
Query: 435 ENATLEHLYKAWLG------GKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
N + +Y+ WLG G +L T+YH + K ALN++W
Sbjct: 343 -NKAVLEVYRDWLGLEDPLHGTGGSGDATLLRTTYHALEKTTNALNIRW 390
>gi|224086530|ref|XP_002307904.1| predicted protein [Populus trichocarpa]
gi|222853880|gb|EEE91427.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 199/498 (39%), Positives = 274/498 (55%), Gaps = 44/498 (8%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L++ DL DFI PSQ C+ + K + P T + D + N E+
Sbjct: 2 SEKFSPTLRIGDLSDFIAPSQACVVSLKGLKTTTPNTRKR-----DKPEVAIAN--REQN 54
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
V+ISL DCLACSGCITSAE+V++ +QS +E + S+ + K I++SL+
Sbjct: 55 DPVKISLKDCLACSGCITSAETVMLEKQSLDEFL-----------SNIDKGKAIIVSLSP 103
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG-- 180
Q SL F +S QV KL FFK LGV V D + +LVE NEFL R+
Sbjct: 104 QSRASLAFYFGISPLQVFKKLTTFFKSLGVKAVFDTSCSRDLTLVETCNEFLCRYKQSQL 163
Query: 181 --------GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
P+ +S CPGW+CYAEK G +ILPY+S VKSPQQ +G+ IK H+ +K+G+
Sbjct: 164 NIDEKSNPSLPMLSSACPGWICYAEKQLGSYILPYVSSVKSPQQTIGATIKHHICQKMGL 223
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNE---------ELGYRDVDCVITAVELEVLLANE 283
P +YHVT+MPCYDKKLEA+R DF E L +VD V+T E+ L+ +
Sbjct: 224 RPDEVYHVTVMPCYDKKLEAARGDFVFEVEQEDANKNSLRITEVDSVLTTGEVLDLI--K 281
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG--ESPVVE 341
L ++ D LD + L SGGYA VL +A R + E P+
Sbjct: 282 LKAVDIETLDDSPLDKMLTNVSEEGYLYGVPGSSGGYAETVLRYAARMVFGREIEGPLA- 340
Query: 342 FKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCL 400
F+ LRN D E T G V L+F + GF+N+QN+++K+K R Y F+EIMACPSGCL
Sbjct: 341 FRSLRNNDFCEVTLEVDGKVVLKFALCYGFQNLQNIVRKVKMGRCDYHFVEIMACPSGCL 400
Query: 401 NGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHML 459
NGG QI+ + SP+E LETI + ++ +P EN ++ LY WL ++K K +
Sbjct: 401 NGGGQIKPKPQQSPRELLQSLETIYMENILVKDPFENPLVKSLYDEWLDQPGSEKAKRHM 460
Query: 460 NTSYHNIPKNNIALNVKW 477
+T YH + K+ A W
Sbjct: 461 HTEYHPVVKSVTAQLHNW 478
>gi|357115639|ref|XP_003559595.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
[Brachypodium distachyon]
Length = 471
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/493 (41%), Positives = 279/493 (56%), Gaps = 38/493 (7%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M+SSRFS LQ +DL+DFI PSQ+C+ I + K S I+ ++ I +N E
Sbjct: 1 MSSSRFSPALQASDLNDFIAPSQDCV--ISLNKSSSAARRLPIKQKE----IVVSNKPPE 54
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
V+ISL DCLACSGCITSAE+V++ +QS ++ + I K +++S+
Sbjct: 55 D--SVKISLKDCLACSGCITSAETVMLEKQSLDDFVSRINSG-----------KAVIVSV 101
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-- 178
+ Q SL A F LS QV KL FK +GV V D + +L+E NEF+ R+
Sbjct: 102 SPQSRASLAAFFGLSQSQVFRKLTALFKSMGVKAVYDTSSSRDLALIEACNEFISRYQLK 161
Query: 179 -SGGG-------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
S G PL +S CPGW+CYAEK+ G +ILPYIS VKSPQQV+G+ IK H+ EKL
Sbjct: 162 QSSNGKEVGTSLPLLSSACPGWICYAEKTLGSYILPYISSVKSPQQVIGAAIKHHMVEKL 221
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYN--EELGYRDVDCVITAVE-LEVLLANELATT 287
G+ P +YHVT+MPCYDKKLEA R DF EE +VD V+T E L+++ +
Sbjct: 222 GLKPYDVYHVTVMPCYDKKLEAVRDDFVFSVEEKEITEVDSVLTTGEVLDLIQSKSFDFK 281
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE-SPVVEFKPLR 346
T++E LD + L GSGGYA + +A R L E ++FK LR
Sbjct: 282 TMEESP---LDRLLTNVDEDGHLYGVSGGSGGYAETIFRYAARALFNREIEGPLDFKILR 338
Query: 347 NPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
N D RE T G L+F + GFRN+QN+++K+K + Y FIE+MACPSGCLNGG Q
Sbjct: 339 NSDFREVTLEVDGKPVLKFALCYGFRNLQNIVRKIKMGKCEYQFIEVMACPSGCLNGGGQ 398
Query: 406 IRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
I+ K S K+ +LE + + D++ S P +N LY WL ++ K L+T YH
Sbjct: 399 IKPVKGQSAKDLIQQLEGVYIQDVSISNPFDNPIATRLYDDWLVQPGSENAKKYLHTKYH 458
Query: 465 NIPKNNIALNVKW 477
+ K+ + W
Sbjct: 459 PVVKSVASQLQNW 471
>gi|224139480|ref|XP_002323132.1| predicted protein [Populus trichocarpa]
gi|222867762|gb|EEF04893.1| predicted protein [Populus trichocarpa]
Length = 471
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 194/498 (38%), Positives = 271/498 (54%), Gaps = 51/498 (10%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L++ DL DFI PSQ C+ + K + P T A +E+
Sbjct: 2 SEKFSPTLRIGDLSDFIAPSQACVVSLKGLKTTAPNTVAI--------------ANKEQT 47
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
V+ISL DCLACSGCITSAE+V++ +QS ++ + S+ + K I++SL+
Sbjct: 48 DPVKISLKDCLACSGCITSAETVMLEKQSLDDFL-----------SNIDKGKAIIVSLSP 96
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL---- 178
Q SL F +S QV KL FFK LGV V D + +L+E NEF++R+
Sbjct: 97 QSRASLAVYFGISPLQVFKKLTTFFKSLGVKAVFDTSSSRDLTLIETCNEFVNRYKQSQL 156
Query: 179 ------SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
+ P+ +S CPGW+CYAEK G ++LP+IS VKSPQQ +G+ IK H+ +K+G+
Sbjct: 157 NNNEKSNSALPMLSSACPGWICYAEKQLGSYVLPFISSVKSPQQTIGATIKHHICQKMGL 216
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNE---------ELGYRDVDCVITAVELEVLLANE 283
P +YHVT+MPCYDKKLEA R DF E L +VD V+T E+ L+ +
Sbjct: 217 RPDEVYHVTVMPCYDKKLEAVRDDFVFEVEQEDANKNGLRIAEVDSVLTTGEVLDLI--K 274
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG--ESPVVE 341
+ D LD + L SGGYA V +A R L E P+
Sbjct: 275 FKAVDFETLDDSPLDKMLTNVSEEGYLYGVAGSSGGYADTVFRNAARMLYGREIEGPLA- 333
Query: 342 FKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCL 400
FK LRN D RE T G V L+F + GF+N+QN+++K+K + Y F+E+MACPSGCL
Sbjct: 334 FKSLRNMDFREVTLEVDGKVVLKFALCYGFQNLQNIVRKVKIGKCDYHFVEVMACPSGCL 393
Query: 401 NGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHML 459
NGG QI+ + SPKE LETI + ++ +P EN ++ LY WL ++K K +
Sbjct: 394 NGGGQIKPKPQQSPKELLQSLETIYMENVLIKDPFENLLVKSLYDEWLEKPGSEKAKRHM 453
Query: 460 NTSYHNIPKNNIALNVKW 477
+T YH + K+ A W
Sbjct: 454 HTEYHPMVKSVTAQLHNW 471
>gi|413933075|gb|AFW67626.1| hypothetical protein ZEAMMB73_922832 [Zea mays]
Length = 472
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 198/494 (40%), Positives = 278/494 (56%), Gaps = 39/494 (7%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M+SSRFS LQ +DL+DFI PSQ+CI + S R R Q+ + T +
Sbjct: 1 MSSSRFSPALQASDLNDFIAPSQDCIISLNKNTSSSSR-----RPQNKQK--ETTVSSKP 53
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
+ V+ISL DCLACSGCITSAE+V++ +QS + + I + K +++S+
Sbjct: 54 PEEAVKISLKDCLACSGCITSAETVMLEKQSLGDFIDRINSD-----------KAVIVSV 102
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-- 178
+ Q SL A F LS QV+ KL FK +GV V D + SL+E NEF+ R+
Sbjct: 103 SPQSRASLAAFFGLSQSQVLRKLTSLFKSIGVKAVFDTSSSRDLSLIEACNEFVSRYQRS 162
Query: 179 --SGGG------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
S G PL +S CPGW+CYAEK+ G +ILPYIS VKSPQQ +G+ IK H+AE+L
Sbjct: 163 QPSSGQEAGANLPLISSACPGWICYAEKTLGSYILPYISSVKSPQQAIGAAIKHHVAERL 222
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYR--DVDCVITAVE-LEVLLANELATT 287
G+ P H+YHVT+MPCYDKKLEA R DF G +VD V+T E L+++ + +
Sbjct: 223 GLKPYHVYHVTVMPCYDKKLEAVRDDFTFSVDGKEVTEVDSVLTTGEVLDLIQSKSIDFK 282
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAI--RQLCPGESPVVEFKPL 345
T++E L DE + G ++H I R++ E P ++F+ L
Sbjct: 283 TVEESSLDRLLTNVDEEGHLYGVSGGSGGYAETIFRYVAHVIYKREI---EGP-LDFRIL 338
Query: 346 RNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
RN D RE T G L+F + GFRN+QN+++K+K + Y FIE+MACPSGCLNGG
Sbjct: 339 RNSDFREITLEVEGKPVLKFALCYGFRNLQNVVRKIKMGKCEYHFIEVMACPSGCLNGGG 398
Query: 405 QIRNEKVASPKETALELETILC-DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
Q++ + S KE +LE++ D+ S+P N + LY WLG ++ K L+T Y
Sbjct: 399 QLKPVEGQSAKELIQQLESVYTQDILISDPFRNPIAKKLYDEWLGQPGSENAKKYLHTEY 458
Query: 464 HNIPKNNIALNVKW 477
H + K+ + W
Sbjct: 459 HPVVKSVASQLQNW 472
>gi|328773770|gb|EGF83807.1| hypothetical protein BATDEDRAFT_21296 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 211/571 (36%), Positives = 299/571 (52%), Gaps = 116/571 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETN-GREEKLKK 64
FS + LTDL+DFI PSQ CIKP I+ + ++ + ++ G Y + T G + KL+
Sbjct: 3 FSSAIVLTDLNDFITPSQACIKPTLIKTVADSKSISTVQSDSLGNYYEVTKEGTQTKLEA 62
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
ISLTDCL+CSGC+TSAE++LITQQSH+E+ I N+A + + I +S+ Q
Sbjct: 63 AAISLTDCLSCSGCVTSAEAILITQQSHKEIYNTIEANSAL---AKDQRAQICISICPQS 119
Query: 125 VLSLGAKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
SL AK+ L+ Q+ +L FFK +D VLD + F+L+E +EF+ R+ +
Sbjct: 120 RASLAAKYNLTTRQIRRRLTWFFKDHFKMDHVLDTAFSRDFALLESAHEFVRRYKARSDT 179
Query: 183 ------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ TS CPGW+CYAEK+H ILP I KSPQQ+MGSL+K + A +L V+P
Sbjct: 180 SLLQHMPMITSACPGWICYAEKTHSA-ILPLIDTTKSPQQIMGSLVKDYYANQLNVNPDR 238
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDG 295
IYH+T+MPCYDKKLEASR DFYN+ RDVDCVI+ E+E ++ E L +T+QE ++
Sbjct: 239 IYHITVMPCYDKKLEASRQDFYNDIYKTRDVDCVISTGEVERMIQEEGLDISTMQETEED 298
Query: 296 ILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPL---------- 345
++ + H G+ SGGY V+ + + L V+ PL
Sbjct: 299 LI---FGAHG-----RSEGSSSGGYLAYVMRFSAKALFG-----VDLTPLDIQEGTNGIT 345
Query: 346 ----RNPDIREATFT---CGDVTLRFCIANGFRNIQNLIQKLK------------RKRLP 386
RNPD + FT + LRF + GFRNIQNLI+K+K R R
Sbjct: 346 IVAGRNPDSTDVLFTPPGFDEPALRFAYSYGFRNIQNLIRKVKPGKPATTLLNPRRVRSS 405
Query: 387 -------YDFIEIMACPSGCLNGGAQIRNE-KVASPKETALE----LETILCDL------ 428
Y+++E+MACPSGC+NGG Q++ E ++ S K E + TI DL
Sbjct: 406 TALASGKYNYVEVMACPSGCINGGGQLKPEPQLKSEKTQTFESKDSVNTIELDLEIQSTA 465
Query: 429 --------------------------AKSE------------PRENATLEHLYKAWLGGK 450
+++E P NA ++ LY WLGG+
Sbjct: 466 QPPLIESTASASSLTTDGTLSGKQWISRAESMYRSADESIELPETNAVIKRLYAEWLGGE 525
Query: 451 STDKGKHMLNTSYHNI----PKNNIALNVKW 477
T+K + ML+T YH++ L KW
Sbjct: 526 DTEKSRKMLHTGYHSVEPLTSSTTAGLITKW 556
>gi|326427053|gb|EGD72623.1| hypothetical protein PTSG_04358 [Salpingoeca sp. ATCC 50818]
Length = 528
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/415 (44%), Positives = 264/415 (63%), Gaps = 23/415 (5%)
Query: 2 ASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREE 60
+S+ SG +QL+DL+DFI P Q CIKP+ +++ G AKI I+ DG+Y+Q + +G +
Sbjct: 29 SSTMSSGRVQLSDLNDFITPGQACIKPVEVQREEG--KPAKIAIEPDGSYMQLKEDGTKV 86
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIV-LS 119
KL+K +I+L DCLACSGC+TSAESVLI +Q+H+E+ EN A N+ ++V +
Sbjct: 87 KLEKAKITLNDCLACSGCVTSAESVLIEKQNHKEL-----EN----AVQNKKEGSLVCVC 137
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF-- 177
++ Q SL +F +S + +L FFK +GVD V DV + +L E E + R
Sbjct: 138 ISQQSYASLAVRFDISAVEACQRLVTFFKSIGVDYVFDVTVGRSIALRESARELVSRVRN 197
Query: 178 -LSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
+ G P+ S CPGW+CYAEK+H E LP+IS+VKSPQQ+MG+L+K H A +LGV P
Sbjct: 198 PMEGSPVPVLASSCPGWICYAEKTHPE-ALPFISKVKSPQQIMGALVKYHFAPQLGVKPQ 256
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
++ V +MPC+DKKLEASR DFY++ RDVDCVI + E+E +L E L + + G
Sbjct: 257 DVFMVAVMPCFDKKLEASRQDFYSDIYRTRDVDCVIVSHEVETML--EERKLRLNDVEMG 314
Query: 296 ILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
LD + +++ G+GSGGY H+VL +A R+L E VE R D ++ T
Sbjct: 315 QLDSVLRPGHFDQVVGHVGSGSGGYLHHVLLYAARELHGVEMSEVEMVSRRGEDYKD-TQ 373
Query: 356 TC--GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
C G L+ A GFRNIQN+I+++KR + PY ++EIMACP GC+NGG QIR+
Sbjct: 374 VCVDGKPVLKMATAYGFRNIQNIIRRVKRNKCPYQYVEIMACPKGCVNGGGQIRH 428
>gi|449443528|ref|XP_004139529.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
[Cucumis sativus]
gi|449505551|ref|XP_004162505.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
[Cucumis sativus]
Length = 478
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 194/501 (38%), Positives = 284/501 (56%), Gaps = 50/501 (9%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L++ DL+DFI PSQ CI + K + + +++ + +Q K
Sbjct: 2 SEKFSATLRIGDLNDFIAPSQACIVSLKGLKATATKPD---KVEVSASRMQL------KA 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+ V+ISL DCLACSGC+TSAE+V++ +QS +E + +N +K K +++SL+
Sbjct: 53 EPVKISLKDCLACSGCVTSAETVMLEKQSLDEFL-----SNLNKG------KVVIVSLSP 101
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG-- 180
Q SL F +S +V KL FFK +GV + D + +L+E NEF+ R+ +
Sbjct: 102 QSRASLAVHFGISPLKVFKKLTTFFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQQ 161
Query: 181 --------GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
P+ +S CPGW+CYAEK HG +ILPYIS VKSPQQ++GS++K H+ +KLG+
Sbjct: 162 DNEEKCKSSVPMISSACPGWICYAEKQHGSYILPYISSVKSPQQMIGSIVKHHMCQKLGI 221
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFY------NEEL---GYR--DVDCVITAVE-LEVLL 280
+YHVT+MPCYDKKLEA+R DF N+ L +R +VD V+T+ E LE++
Sbjct: 222 RSDDVYHVTVMPCYDKKLEAAREDFVFQLDSANKTLEAEAHRITEVDSVLTSGEVLELIQ 281
Query: 281 ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG--ESP 338
E+ +L+E LD N L SGGYA + HA + L E P
Sbjct: 282 MKEVDFKSLEESP---LDRMLTNVNEEGHLFGVSGSSGGYAETIFRHAAKILFGKDIEGP 338
Query: 339 VVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPS 397
+EFK +RN D +E T G L+F + GFRN+QN+++K+K + Y F+EIMACPS
Sbjct: 339 -LEFKLIRNSDFQELTLEVEGKTLLKFALCYGFRNLQNVVRKIKTGKCDYHFLEIMACPS 397
Query: 398 GCLNGGAQIRNEKVASPKETALELETILCD-LAKSEPRENATLEHLYKAWLGGKSTDKGK 456
GCLNGG QI+ + SPK+ LE + + +P +N ++ +YK WL ++K K
Sbjct: 398 GCLNGGGQIKPKPGQSPKDLIELLEAAYQENVLMRDPFDNPVVKEIYKEWLEEPGSEKAK 457
Query: 457 HMLNTSYHNIPKNNIALNVKW 477
L+T YH + K+ A W
Sbjct: 458 KHLHTEYHPVVKSITAQLHNW 478
>gi|255563810|ref|XP_002522906.1| electron transporter, putative [Ricinus communis]
gi|223537891|gb|EEF39506.1| electron transporter, putative [Ricinus communis]
Length = 475
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 191/488 (39%), Positives = 276/488 (56%), Gaps = 51/488 (10%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L++ DL DFI PSQ C+ + K + + ++ +++
Sbjct: 2 SEKFSPTLRIGDLSDFIAPSQACVVSLKGLKSNSKKPEVRV-------------SNKQQS 48
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+ V+ISL DCLACSGCITSAE+V++ +QS +E + S+ + K +V+SL+
Sbjct: 49 EPVKISLKDCLACSGCITSAETVMLEKQSLDEFL-----------SNIDKGKAVVISLSP 97
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
Q SL A F +S QV KL FFK LGV V D + +L+E NEF+ R+
Sbjct: 98 QSRASLAAHFDISPPQVFKKLTTFFKSLGVKAVFDTSSSRDITLIETCNEFITRYKQSQS 157
Query: 183 ----------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
P+ +S CPGW+CYAEK G +ILPYIS VKSPQQ++G+ IK + +K+G+
Sbjct: 158 NDDERSKSALPMLSSACPGWICYAEKQLGSYILPYISPVKSPQQIVGATIKHQICQKMGL 217
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNE-ELGYRDVDCVITAVELEVLLANELATTTLQE 291
P +YHVT+MPCYDKKLEA R DF E E + D ++ E++ +L + L
Sbjct: 218 RPDEVYHVTVMPCYDKKLEAVRDDFVIELESQEENGDSLVRIAEVDSVLT---SGEVLDL 274
Query: 292 EKDGILDWPWDEHNP-HRMLL-VNGTG--------SGGYAHNVLSHAIRQLCPGE-SPVV 340
K +D+P E +P RM VN G SGGYA V +A + L E + +
Sbjct: 275 IKLKAVDFPALEESPLDRMFSNVNEEGHLYGVSGSSGGYAETVFRNATKTLFGIEINGPL 334
Query: 341 EFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
FK +RN D RE T G V L+F + GF+N+QN+++K+K ++ Y F+E+MACPSGC
Sbjct: 335 TFKTIRNTDFREVTLEVDGHVLLKFALCYGFQNLQNIVRKIKMQKCDYHFVEVMACPSGC 394
Query: 400 LNGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHM 458
LNGG QI+ + SPK+ LETI + ++ ++P EN ++ LY WL ++K K
Sbjct: 395 LNGGGQIKPKPGQSPKDLLQSLETIYMENVLVADPFENPLIKSLYDEWLEEPGSEKAKRY 454
Query: 459 LNTSYHNI 466
L+T YH +
Sbjct: 455 LHTEYHPV 462
>gi|115455341|ref|NP_001051271.1| Os03g0748700 [Oryza sativa Japonica Group]
gi|18087682|gb|AAL58974.1|AC091811_23 putative hydrogenase [Oryza sativa Japonica Group]
gi|108711082|gb|ABF98877.1| Narf, putative, expressed [Oryza sativa Japonica Group]
gi|113549742|dbj|BAF13185.1| Os03g0748700 [Oryza sativa Japonica Group]
gi|125545724|gb|EAY91863.1| hypothetical protein OsI_13510 [Oryza sativa Indica Group]
Length = 476
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 208/500 (41%), Positives = 276/500 (55%), Gaps = 61/500 (12%)
Query: 5 RFSGVLQLTDLDDFIGPSQECIKPIPIEK-PSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
RFS LQ +DL+DFI PSQ+CI I + K PS R K Q + A TN EE +K
Sbjct: 11 RFSPALQASDLNDFIAPSQDCI--ISLNKGPSARRLPIK---QKEIAV--STNPPEEAVK 63
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
ISL DCLACSGCITSAE+V++ +QS + + I + K +++S++ Q
Sbjct: 64 ---ISLKDCLACSGCITSAETVMLEKQSLGDFITRINSD-----------KAVIVSVSPQ 109
Query: 124 PVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF----LS 179
SL A F LS QV KL FK +GV V D + SL+E +EF+ R+ LS
Sbjct: 110 SRASLAAFFGLSQSQVFRKLTALFKSMGVKAVYDTSSSRDLSLIEACSEFVTRYHQNQLS 169
Query: 180 GGG------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
G P+ +S CPGW+CYAEK+ G FILPYIS VKSPQQ +G+ IK H+ KLG+
Sbjct: 170 SGKEAGKNLPMLSSACPGWICYAEKTLGSFILPYISAVKSPQQAIGAAIKHHMVGKLGLK 229
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYN--EELGYRDVDCVITAVE-LEVLLANELATTTLQ 290
P +YHVT+MPCYDKKLEA R DF E+ +VD V+T E L+++ + + TL+
Sbjct: 230 PHDVYHVTVMPCYDKKLEAVRDDFVFSVEDKDVTEVDSVLTTGEVLDLIQSRSVDFKTLE 289
Query: 291 EEKDGILDWPWDEHNPHRMLLVNGTGSG----------GYAHNVLSHAIRQLCPGE-SPV 339
E +P LL N G GYA V HA L +
Sbjct: 290 E-------------SPMDRLLTNVDDDGQLYGVSGGSGGYAETVFRHAAHVLFDRKIEGS 336
Query: 340 VEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSG 398
V+F+ LRN D RE T G L+F + GFRN+QN+I+K+K + Y FIE+MACPSG
Sbjct: 337 VDFRILRNSDFREVTLEVEGKPVLKFALCYGFRNLQNIIRKIKMGKCEYHFIEVMACPSG 396
Query: 399 CLNGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKH 457
CLNGG QI+ K S K+ LE + + D++ S P EN + LY WLG ++ K
Sbjct: 397 CLNGGGQIKPAKGQSAKDLIQLLEDVYIQDVSVSNPFENPIAKRLYDEWLGQPGSENAKK 456
Query: 458 MLNTSYHNIPKNNIALNVKW 477
L+T YH + K+ + W
Sbjct: 457 YLHTKYHPVVKSVASQLQNW 476
>gi|290562579|gb|ADD38685.1| Probable cytosolic Fe-S cluster assembly factor GL21135
[Lepeophtheirus salmonis]
Length = 446
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 189/483 (39%), Positives = 271/483 (56%), Gaps = 43/483 (8%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M S FSG +QLT LDDFI PS CIKP+ + + Q+ G+
Sbjct: 1 MESRGFSGAIQLTGLDDFITPSLACIKPVDSTNNNSSESA------------QDLEGKPP 48
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
+ K ISLTDCLAC+GC+T+AESVL+ QS +E+ K + S + +++S+
Sbjct: 49 Q--KATISLTDCLACAGCVTTAESVLVEAQSSDELRKRFQ-------SKGKVYDVLIVSV 99
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q ++SL KF LS Q + +FK LGVD + ++ I +L E E + G
Sbjct: 100 STQSLISLSNKFGLSLSQTSNVIINYFKSLGVDYIYNLKICEDIALQEQSIETILHLSQG 159
Query: 181 G-GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL-GVHPSHIY 238
GP+ TS CPGW+CYAEK+HG++ILPYIS+VKSPQQ+MG+L+K+ A + + I
Sbjct: 160 NKGPILTSSCPGWICYAEKTHGDWILPYISKVKSPQQIMGALVKSWGANNIYNTESTRIC 219
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELE-VLLANELATTTLQEEK--DG 295
HVT+MPC+DKKLEASR DF + DVD V T+VELE ++LA+ + + E D
Sbjct: 220 HVTVMPCFDKKLEASRRDFMDSN-NIPDVDLVTTSVELEQMILADNFSLHDIPESYAFDK 278
Query: 296 ILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
I E + + + +G+GSGG+ ++ I+ L P +++ +N D E +
Sbjct: 279 IF-----ESCSNELEVNHGSGSGGFCESIFLDTIKSLFDDNDPSLDYNMRKNLDFMELKY 333
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
+ F +ANGFRNIQN++Q LKRK+ +DFIEIMACPSGCLNGGAQ E + + K
Sbjct: 334 EKNGRKIHFGVANGFRNIQNIVQMLKRKKCDFDFIEIMACPSGCLNGGAQAVPEDIDN-K 392
Query: 416 ETALELETILCDLAKSEPRENATL-EHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
++ + L K+ N +L + LY K + T+YH IPK L
Sbjct: 393 VFISTIKELYNSLPKTRSSNNNSLPKDLYSEL---------KPLFYTNYHAIPKETNGLT 443
Query: 475 VKW 477
++W
Sbjct: 444 IEW 446
>gi|359496948|ref|XP_003635380.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like [Vitis
vinifera]
gi|297744923|emb|CBI38438.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 186/493 (37%), Positives = 271/493 (54%), Gaps = 50/493 (10%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEK--PSGPRTGAKIRIQDDGAYIQETNGREE 60
S +FS L++ DL+DFI PSQ C+ + K P+ P + T +
Sbjct: 2 SEKFSATLRIGDLNDFIAPSQGCVVSLKGLKAAPAKPEKAEVV-----------TGTKSA 50
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
+ V+ISL DCLACSGCITSAE+V++ +QS +E + I + K +++SL
Sbjct: 51 NTEPVKISLKDCLACSGCITSAETVMLEKQSMDEFLFNINKG-----------KAVIVSL 99
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF--- 177
+ Q S F LS QV+ KL FFK LGV V D + SL+E N F+ R+
Sbjct: 100 SPQSRASFAIHFGLSPLQVLRKLTTFFKSLGVKAVFDTSCSRDLSLIESCNAFISRYKQH 159
Query: 178 -------LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
P+ +S CPGW+CYAEK+ G +ILPYIS VKSPQQ +G IK +L +K+
Sbjct: 160 HSTEDEKCKTSLPMLSSACPGWICYAEKTLGSYILPYISSVKSPQQTIGVTIKNYLCQKM 219
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADF---------YNEELGYR--DVDCVITAVELEVL 279
G P +YHV++MPCYDKKLEA+R DF +E G R +VD V+T+ E+ L
Sbjct: 220 GFRPDEVYHVSVMPCYDKKLEAARDDFVFEVDSPGGVHENTGLRITEVDSVLTSGEVLEL 279
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE-SP 338
+ +L + + ++ LD N L SGGYA + +A + L E
Sbjct: 280 I--QLKSVDFKNLEESPLDRLLTNVNEEGHLYGVQGSSGGYADTIFRYAAKTLFGRELKG 337
Query: 339 VVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPS 397
++FK +RN D RE T G L+F + GFRN+QN+++K+K + Y F+E+MACPS
Sbjct: 338 PLDFKTVRNSDFREVTLEIEGQTMLKFALCYGFRNLQNIVRKIKIGKCDYHFLEVMACPS 397
Query: 398 GCLNGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKGK 456
GCLNGG QI+ + S K+ LE I + ++ ++P +N ++ LY WL ++K K
Sbjct: 398 GCLNGGGQIKPKAGQSAKDLIQSLEAIYMENVVVADPFKNPIVKGLYDEWLEQPGSEKAK 457
Query: 457 HMLNTSYHNIPKN 469
+++T YH + K+
Sbjct: 458 RLIHTEYHPVVKS 470
>gi|290463009|gb|ADD24552.1| Probable cytosolic Fe-S cluster assembly factor GL21135
[Lepeophtheirus salmonis]
Length = 449
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 186/483 (38%), Positives = 268/483 (55%), Gaps = 43/483 (8%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M S FSG +QLT LDDFI PS CIKP+ + + + +
Sbjct: 4 MESRGFSGAIQLTGLDDFITPSLACIKPVDSTNNNSSESAQDLE--------------SK 49
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
+K ISLTDCLAC+GC+T+AESVL+ QS +E+ K + S + +++S+
Sbjct: 50 PPQKATISLTDCLACAGCVTTAESVLVEAQSSDELRKRFQ-------SKGKVYDVLIVSV 102
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q ++SL KF LS Q + +FK LGVD + ++ I +L E E + G
Sbjct: 103 STQSLISLSNKFGLSLSQTSNVIINYFKSLGVDYIYNLKICEDIALQEQSIETILHLSQG 162
Query: 181 G-GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL-GVHPSHIY 238
GP+ TS CPGW+CYAEK+HG++ILPYIS+VKSPQQ+MG+L+K+ A + + I
Sbjct: 163 NKGPILTSSCPGWICYAEKTHGDWILPYISKVKSPQQIMGALVKSWGANNIYNTESTRIC 222
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELE-VLLANELATTTLQEEK--DG 295
HVT+MPC+DKKLEASR DF + DVD T+VELE ++LA+ + + E D
Sbjct: 223 HVTVMPCFDKKLEASRRDFMDSN-NIPDVDLATTSVELEQMILADNFSLHDIPESYAFDK 281
Query: 296 ILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
I E + + + +G+GSGG+ ++ I+ L P +++ +N D E +
Sbjct: 282 IF-----ESCSNELEVNHGSGSGGFCESIFLDTIKSLFDDNDPSLDYNMRKNLDFMELKY 336
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
+ F +ANGFRNIQN++Q LKRK+ +DFIEIMACPSGCLNGGAQ E + + K
Sbjct: 337 EKNGRKIHFGVANGFRNIQNIVQMLKRKKCDFDFIEIMACPSGCLNGGAQAVPEDIDN-K 395
Query: 416 ETALELETILCDLAKSEPRENATL-EHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
++ + L K+ N +L + LY K + T+YH IPK L
Sbjct: 396 VFISTIKELYNSLPKTRSSNNNSLPKDLYSEL---------KPLFYTNYHAIPKETNGLT 446
Query: 475 VKW 477
++W
Sbjct: 447 IEW 449
>gi|297800500|ref|XP_002868134.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313970|gb|EFH44393.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 474
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 186/497 (37%), Positives = 269/497 (54%), Gaps = 46/497 (9%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L+L DL+DFI PSQ C+ + KP I Q +++L
Sbjct: 2 SEKFSPTLRLGDLNDFIAPSQACVISLKDSKP----------IVKKSDRPQVVIAPKQQL 51
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+ V+ISL DCLACSGCITSAE+V++ +QS +E + + + K +++S++
Sbjct: 52 EPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSALSKG-----------KDVIVSISP 100
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
Q SL + +S QV KL F K LGV V D + L+E NEF+ R+
Sbjct: 101 QSRASLAVHYEISPLQVFKKLTTFLKSLGVKAVFDTSCSRDLVLIEACNEFVSRYKQANS 160
Query: 183 ----------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
P+ +S CPGW+CYAEK G ++LPY+S VKSPQQ +G+ IK HL + LG+
Sbjct: 161 DDGENSQSPLPVLSSACPGWICYAEKQLGSYVLPYVSSVKSPQQAIGAAIKHHLCQALGL 220
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEE-------LGYRDVDCVITAVELEVLLANELA 285
+YHVT MPCYDKKLEA+R DF E+ L +VD V+T E+ L+ +L
Sbjct: 221 RLQEVYHVTAMPCYDKKLEAARDDFVFEDGAQDNGSLKLTEVDSVLTTGEILDLI--KLK 278
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG--ESPVVEFK 343
++ ++ LD L SGGYA + HA + L E P +EFK
Sbjct: 279 GVDFKDLEESPLDRMLTNVTEEGHLYGVAGSSGGYAETIFRHAAKALFGQTIEGP-LEFK 337
Query: 344 PLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNG 402
LRN D RE T G L+F + GF+N+QN+++++K ++ Y ++EIMACP+GCLNG
Sbjct: 338 TLRNSDFREVTLQLEGKTVLKFALCYGFQNLQNIVRRVKTRKCDYHYVEIMACPAGCLNG 397
Query: 403 GAQIRNEKVASPKETALELE-TILCDLA-KSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
G QI+ + S KE LE T + D ++P +N T + LY+ WL +++ K L+
Sbjct: 398 GGQIKPKTGQSQKELINSLEATYMNDTTLNTDPYQNPTAKRLYEEWLKEPGSNEAKKFLH 457
Query: 461 TSYHNIPKNNIALNVKW 477
T YH + K+ + W
Sbjct: 458 TQYHPVVKSVTSQLNNW 474
>gi|384245871|gb|EIE19363.1| iron hydrogenase [Coccomyxa subellipsoidea C-169]
Length = 491
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 194/511 (37%), Positives = 273/511 (53%), Gaps = 58/511 (11%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
++FSG ++L DL+DFI PSQ C+ I G + G I+ D + + + KL
Sbjct: 2 AQFSGAVKLADLNDFIAPSQACVVNI-----HGKKEG---NIKLDFDALDKPPEKASKLI 53
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
+ +SL DCLACSGC+TSAE+VL+ QS E M + + T+V+S++ Q
Sbjct: 54 NI-MSLQDCLACSGCVTSAETVLLEHQSAAEFMSKLADPGV----------TVVVSVSPQ 102
Query: 124 PVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF------ 177
+L A + LS + + KL GFFK LGV VLD F+L+E EF+ R+
Sbjct: 103 SRTALAAFYGLSPAETLQKLTGFFKGLGVRAVLDTSTGRDFALLEAAAEFVQRYREAHPE 162
Query: 178 LSGGG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ----------------- 216
L+G P+ S CPGWVCYAEK+HG+++LP+IS KSPQ
Sbjct: 163 LAGESMPSLPMLASACPGWVCYAEKTHGDYVLPHISSTKSPQASPQLYKFPANTPSITSL 222
Query: 217 --VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAV 274
VMG+L+K HLA + G+ P +YH +MPCYDKKLEASR DF +VD V+T+
Sbjct: 223 FAVMGTLVKRHLAAQWGLQPGQVYHCAIMPCYDKKLEASREDFNVPGTSVAEVDSVLTSG 282
Query: 275 ELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCP 334
E++++L E+ L E LD L GSGGY + A QL
Sbjct: 283 EVQLML--EVHGRPLGELPSARLDSLVGSAPEDGQLYGLPGGSGGYLEYIFRAAAAQLFG 340
Query: 335 GE--SPVVEFKPLRNPDIREATFTCGD-VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIE 391
E + + + LRN D +E + G LRF IA GFRNIQ L++K+KR YD++E
Sbjct: 341 KEVEAGPLPLRTLRNADFQEVSLDVGGRPALRFAIAYGFRNIQTLVRKIKRGASEYDYVE 400
Query: 392 IMACPSGCLNGGAQIRNEKVASPKETALELETILCD----LAKSEPRENATLEHLYKAWL 447
IMACPSGCLNGG QI+ + S ++ EL+ I D + P++N T+ LY+ W+
Sbjct: 401 IMACPSGCLNGGGQIKPQPGQSSQQLLDELDAIYHDPQACVVPRLPQDNPTVAALYERWV 460
Query: 448 GGK-STDKGKHMLNTSYHNIPKNNIALNVKW 477
G +++G+ + T YH K+ A W
Sbjct: 461 GAPVGSEQGRQLFFTEYHKRDKSIAATVGDW 491
>gi|294460159|gb|ADE75662.1| unknown [Picea sitchensis]
Length = 488
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/491 (38%), Positives = 272/491 (55%), Gaps = 44/491 (8%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQET---NGRE 59
+ RFS L+L +L+D+I PSQ CI + G + K + QD IQE
Sbjct: 2 TGRFSATLRLGNLNDYIAPSQSCI----VSLKGGLKATPKSKTQDVLVQIQEKVPPRSDP 57
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLS 119
L+ V+++L DCLACSGC+TSAE+V++ QQS E + IR S EN +V+S
Sbjct: 58 SILEPVKVTLHDCLACSGCLTSAETVMLEQQSVNEFLSHIR--------SGENA--VVVS 107
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF-- 177
++ Q SL + L+ QV KL GF K LGV V D + SL+E EF+ +
Sbjct: 108 VSPQSRASLATYYGLTPLQVFKKLTGFLKSLGVKAVFDTSCSRDLSLIEACEEFVQCYKG 167
Query: 178 --------LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK 229
L P+ S CPGW+CYAEK+ G ILPYIS VKSPQQ MG++IK H+++K
Sbjct: 168 QFSGENDQLKSSLPMLASACPGWICYAEKTLGPCILPYISTVKSPQQAMGAIIKHHVSKK 227
Query: 230 LGVHPSHIYHVTLMPCYDKKLEASRADFY----------NEELGYR--DVDCVITAVELE 277
+G+ P IYHVT+MPCYDKKLEA R DF E G R +VDCV+T+ E+
Sbjct: 228 MGLVPEKIYHVTIMPCYDKKLEAVRDDFIFSVERQGETGQEAAGPRVSEVDCVLTSGEML 287
Query: 278 VLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE- 336
L ++ + ++ LD + L GSGGYA + +A +QL +
Sbjct: 288 DLF--KMKNIDFKSLEEAPLDRLLTNVDDKGHLYGVRGGSGGYAETIFCYAAKQLYGKDI 345
Query: 337 SPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMAC 395
++FK LRN D RE G+ L+ + GFRN+QN+++K+K + Y F+E+MAC
Sbjct: 346 KGPLDFKILRNSDFREIYLEVNGEKVLKVALCYGFRNLQNIVRKIKAGKSDYHFVEVMAC 405
Query: 396 PSGCLNGGAQIRNEKVASPKETALELE-TILCDLAKSEPRENATLEHLYKAWLGGKSTDK 454
P+GCLNGG QI+ + S K+ LE + L ++ ++P EN ++ LY WLG ++K
Sbjct: 406 PAGCLNGGGQIKPNQGQSVKDLIQSLESSYLEEVLVADPFENPLVKGLYDEWLGKPGSEK 465
Query: 455 GKHMLNTSYHN 465
++T YH+
Sbjct: 466 AVKFIHTEYHH 476
>gi|240255938|ref|NP_567496.4| ferredoxin hydrogenase [Arabidopsis thaliana]
gi|15020824|emb|CAC44620.1| Narf-like protein [Arabidopsis thaliana]
gi|332658348|gb|AEE83748.1| ferredoxin hydrogenase [Arabidopsis thaliana]
Length = 474
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 186/497 (37%), Positives = 270/497 (54%), Gaps = 46/497 (9%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L+L DL+DFI PSQ C+ + KP I Q +++L
Sbjct: 2 SEKFSPTLRLGDLNDFIAPSQACVISLKDSKP----------IVKKSDRPQVVIAPKQQL 51
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+ V+ISL DCLACSGCITSAE+V++ +QS +E + + + K +V+S++
Sbjct: 52 EPVKISLKDCLACSGCITSAETVMLEKQSLDEFLSALSKG-----------KDVVVSVSP 100
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
Q SL + +S QV KL F K LGV V D + L+E NEF+ R+
Sbjct: 101 QSRASLAVHYDISPLQVFKKLTTFLKSLGVKAVFDTSCSRDLVLIESCNEFVSRYKQANS 160
Query: 183 ----------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
P+ +S CPGW+CYAEK G ++LPY+S VKSPQQ +G+ IK HL + LG+
Sbjct: 161 DDGENSQSPLPVLSSACPGWICYAEKQLGSYVLPYVSSVKSPQQAIGAAIKHHLCQALGL 220
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFY-------NEELGYRDVDCVITAVELEVLLANELA 285
+YHVT+MPCYDKKLEA+R DF N +L +VD V+T E+ L+ +L
Sbjct: 221 RLHEVYHVTVMPCYDKKLEAARDDFVFDDGTQDNGDLKLTEVDSVLTTGEIMDLI--KLK 278
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG--ESPVVEFK 343
++ ++ LD L SGGYA + HA + L E P +EFK
Sbjct: 279 GVDFKDLEESPLDRVLTNVTEEGDLYGVAGSSGGYAETIFRHAAKALFGQTIEGP-LEFK 337
Query: 344 PLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNG 402
LRN D RE T G L+F + GF+N+QN+++++K ++ Y ++EIMACP+GCLNG
Sbjct: 338 TLRNSDFREVTLQLEGKTVLKFALCYGFQNLQNIVRRVKTRKCDYQYVEIMACPAGCLNG 397
Query: 403 GAQIRNEKVASPKETALELE-TILCDLA-KSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
G QI+ + S KE LE T + D ++P +N T + L++ WL +++ K L+
Sbjct: 398 GGQIKPKTGQSQKELIHSLEATYMNDTTLNTDPYQNPTAKRLFEEWLKEPGSNEAKKYLH 457
Query: 461 TSYHNIPKNNIALNVKW 477
T YH + K+ + W
Sbjct: 458 TQYHPVVKSVTSQLNNW 474
>gi|241155968|ref|XP_002407667.1| conserved hypothetical protein [Ixodes scapularis]
gi|215494173|gb|EEC03814.1| conserved hypothetical protein [Ixodes scapularis]
Length = 300
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/277 (55%), Positives = 201/277 (72%), Gaps = 11/277 (3%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEKLKK 64
FSGVL++TDL+DFI PSQECIKP+ +EK S + G+ I+I +DG+Y+Q + G+ KL K
Sbjct: 5 FSGVLRITDLNDFITPSQECIKPVKVEKSSS-KLGS-IKIAEDGSYLQVDETGKASKLAK 62
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+I+L DCLACSGCITSAE+VLITQQS EE+ KV+R N+ E + IV+S+A Q
Sbjct: 63 AQITLNDCLACSGCITSAETVLITQQSSEELFKVLRANSELPV---EQRQLIVVSIAPQV 119
Query: 125 VLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS----- 179
S K+ +++++ A+L GFFKRLG VLD A F+LVE+ ++FL+R+
Sbjct: 120 YASFSGKYDVAYDEAAARLTGFFKRLGAHHVLDTTFAREFTLVEMLHDFLERYRRKESDP 179
Query: 180 GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
PL TS CPG+VCYAEK+HG+FILPYISR +SPQQVMGSL+K +LA K+ P IYH
Sbjct: 180 SALPLLTSACPGFVCYAEKTHGDFILPYISRARSPQQVMGSLVKKYLASKISRTPDQIYH 239
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL 276
V++MPCYDKKLEASR DFY+E RDVDCVIT+ L
Sbjct: 240 VSVMPCYDKKLEASRGDFYDEIYSTRDVDCVITSSRL 276
>gi|193786438|dbj|BAG51721.1| unnamed protein product [Homo sapiens]
Length = 374
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/381 (43%), Positives = 224/381 (58%), Gaps = 19/381 (4%)
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLV 167
++ + +V+S++ Q SL A+F L+ KL FFK++GV V D + FSL+
Sbjct: 2 AAPSQQRLVVVSVSPQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLL 61
Query: 168 ELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLI 222
E + EF+ RF G PL S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+
Sbjct: 62 ESQREFVRRFRGQAGCRQALPLLASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLV 121
Query: 223 KTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN 282
K A++ + P IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL
Sbjct: 122 KDFFAQQQHLTPDKIYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEE 181
Query: 283 ELATTTLQEEKDGILD-----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGES 337
E +L + + LD +E HR G GSGGY +V HA R+L
Sbjct: 182 E--GVSLPDLEPAPLDSLCSGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHV 234
Query: 338 PVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
V +KPLRN D +E T G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACP
Sbjct: 235 AEVTYKPLRNKDFQEVTLEKEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACP 294
Query: 397 SGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGK 456
SGCLNGG Q++ S +E +E + + P + ++ LY WL G ++
Sbjct: 295 SGCLNGGGQLQAPDRPS-RELLQHVERLYGMVRAEAPEDAPGVQELYTHWLQGTDSECAG 353
Query: 457 HMLNTSYHNIPKNNIALNVKW 477
+L+T YH + K + L ++W
Sbjct: 354 RLLHTQYHAVEKASTGLGIRW 374
>gi|308801913|ref|XP_003078270.1| putative polyamine oxidase (ISS) [Ostreococcus tauri]
gi|116056721|emb|CAL53010.1| putative polyamine oxidase (ISS) [Ostreococcus tauri]
Length = 2222
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 190/484 (39%), Positives = 271/484 (55%), Gaps = 46/484 (9%)
Query: 6 FSGVLQLTD--LDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDG-----AYIQETNGR 58
FSG +++ L D+I PSQ+C+ + G ++RI D G A +
Sbjct: 1202 FSGAVKIAPDALSDYIAPSQDCVVAL---------DGGRVRIDDLGDAGEVAVRSRRSAP 1252
Query: 59 EEKL---KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI-RENNAHKASSNENTK 114
E + + V+++L+DCLACSGC+TSAESVL+ QQS +E + V R + + + N
Sbjct: 1253 ETRAPTGEAVKVTLSDCLACSGCVTSAESVLLEQQSVDEFLSVRKRLRSMGRGIVDWNLG 1312
Query: 115 TIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFL 174
IV+S++ Q + SLG + L + K G + +G V D+ A +LVE EF+
Sbjct: 1313 VIVVSVSPQSLCSLGKVYGLDKQDTWTKFSGLMRDMGAYKVYDISGARDLALVETYAEFV 1372
Query: 175 DRFLSGG-GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
+R G PL S CPGWVCYAEK+HGE +P+++ KSPQQ+MG+ +K+ +A LGV
Sbjct: 1373 ERANGGAPTPLLASACPGWVCYAEKTHGELAIPHMATTKSPQQIMGTFVKSAVARDLGVS 1432
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK 293
P +YHV++MPCYDKKLEASR DF G +DVD V+T E+ VLL + L+E
Sbjct: 1433 PDRVYHVSVMPCYDKKLEASRDDFMRG--GVKDVDLVLTTGEVVVLL-EKAGLHHLREAP 1489
Query: 294 --------DGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV---VEF 342
DG P E H + +GSGGYA V A ++ +P+ +E+
Sbjct: 1490 NYAYDLMCDGFRVPPESEIAAHFV-----SGSGGYAEYVFRRAAAEIF--NTPIMGAIEW 1542
Query: 343 KPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLN 401
LRN D+REAT T +V LR +A GFRNIQNL++ LK K+ + F+EIMACPSGCLN
Sbjct: 1543 VQLRNMDMREATLTVNNEVVLRVAVAYGFRNIQNLVRSLKMKKCKHHFVEIMACPSGCLN 1602
Query: 402 GGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGK-STDKGKHMLN 460
GG Q+ + S KE L+ + + R ++ LY+AW+GG + + +L
Sbjct: 1603 GGGQLPAPEGMSNKELVDALDEHYRIVERE--RNRVDVDFLYRAWIGGAPGSQPAREILR 1660
Query: 461 TSYH 464
T YH
Sbjct: 1661 TQYH 1664
>gi|10438504|dbj|BAB15261.1| unnamed protein product [Homo sapiens]
gi|119606129|gb|EAW85723.1| nuclear prelamin A recognition factor-like, isoform CRA_b [Homo
sapiens]
gi|193787902|dbj|BAG53105.1| unnamed protein product [Homo sapiens]
Length = 374
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/381 (43%), Positives = 223/381 (58%), Gaps = 19/381 (4%)
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLV 167
++ + +V+S++ Q SL A+F L+ KL FFK++GV V D + FSL+
Sbjct: 2 AAPSQQRLVVVSVSPQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLL 61
Query: 168 ELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLI 222
E + EF+ RF PL S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+
Sbjct: 62 ESQREFVRRFRGQADCRQALPLLASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLV 121
Query: 223 KTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN 282
K A++ + P IYHVT+MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL
Sbjct: 122 KDFFAQQQHLTPDKIYHVTVMPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEE 181
Query: 283 ELATTTLQEEKDGILD-----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGES 337
E +L + + LD +E HR G GSGGY +V HA R+L
Sbjct: 182 E--GVSLPDLEPAPLDSLCSGASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHV 234
Query: 338 PVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
V +KPLRN D +E T G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACP
Sbjct: 235 AEVTYKPLRNKDFQEVTLEKEGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACP 294
Query: 397 SGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGK 456
SGCLNGG Q++ S +E +E + + P + ++ LY WL G ++
Sbjct: 295 SGCLNGGGQLQAPDRPS-RELLQHVERLYGMVRAEAPEDAPGVQELYTHWLQGTDSECAG 353
Query: 457 HMLNTSYHNIPKNNIALNVKW 477
+L+T YH + K + L ++W
Sbjct: 354 RLLHTQYHAVEKASTGLGIRW 374
>gi|255647952|gb|ACU24433.1| unknown [Glycine max]
Length = 474
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 186/494 (37%), Positives = 268/494 (54%), Gaps = 56/494 (11%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIP-IEKPSGPRTGAKIRIQDDGAYIQETNGREEK 61
S +FS L++ DL+DFI PSQ CI + ++K P I+ + K
Sbjct: 2 SEKFSAALRIGDLNDFIAPSQACIVSLKGLKKNDKPEVSNAIK--------------QVK 47
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
+ V+ISL DCLACSGC+TSAE+V++ +QS +E + NN + K +++SL+
Sbjct: 48 FEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFL-----NNINSG------KAVIVSLS 96
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS-- 179
Q S+ F +S Q KL FFK LGV + D + +LVE EF+ R+
Sbjct: 97 PQSRASIAFHFGISPIQAFKKLTRFFKSLGVKAIFDTSCSRDLTLVESCVEFITRYRQNQ 156
Query: 180 --------GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
P+ S CPGW+CYAEK G F+LPYIS VKSPQQ +G +IK ++ ++LG
Sbjct: 157 VVEDERSKSSLPMIASACPGWICYAEKQLGSFVLPYISSVKSPQQTIGVIIKNYVCQELG 216
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADFY-----------NEELGYRDVDCVITAVE-LEVL 279
+ P +YHVT+MPCYDKKLEA+R DF +E +VD V+T E LE++
Sbjct: 217 LRPEEVYHVTVMPCYDKKLEAARDDFVFQFESHAEGRESEINMISEVDSVLTTGEVLELI 276
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE--S 337
+ E+ +L E LD N L SGGYA + +A + L +
Sbjct: 277 QSKEVDFKSLDET---TLDKILTNINEDGYLYGVSGSSGGYAETIFRYAAKTLFGRQIDG 333
Query: 338 PVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
P+ FK +RN D +E T G L+F + GFRN+QN+++KLK + Y F+EIMACP
Sbjct: 334 PLT-FKNIRNSDFQEVTLEVEGKTVLKFALCYGFRNLQNIVRKLKTGKCDYHFLEIMACP 392
Query: 397 SGCLNGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKG 455
SGCLNGG QI+ SPKE + LE++ + ++ + P +N ++ LY WL + K
Sbjct: 393 SGCLNGGGQIKPSSGQSPKELSQLLESVYMENVLVASPFDNPIVKGLYDKWLEQPGSVKA 452
Query: 456 KHMLNTSYHNIPKN 469
++T YH + K+
Sbjct: 453 GRYMHTQYHPVEKS 466
>gi|356562481|ref|XP_003549499.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
[Glycine max]
Length = 474
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 186/494 (37%), Positives = 268/494 (54%), Gaps = 56/494 (11%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIP-IEKPSGPRTGAKIRIQDDGAYIQETNGREEK 61
S +FS L++ DL+DFI PSQ CI + ++K P I+ + K
Sbjct: 2 SEKFSAALRIGDLNDFIAPSQACIVSLKGLKKNDKPEVSNAIK--------------QVK 47
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
+ V+ISL DCLACSGC+TSAE+V++ +QS +E + NN + K +++SL+
Sbjct: 48 FEPVKISLKDCLACSGCVTSAETVMLEKQSLDEFL-----NNINSG------KAVIVSLS 96
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS-- 179
Q S+ F +S Q KL FFK LGV + D + +LVE EF+ R+
Sbjct: 97 PQSRASIAFHFGISPIQAFKKLTRFFKSLGVKAIFDTSCSRDLTLVESCVEFITRYRQNQ 156
Query: 180 --------GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
P+ S CPGW+CYAEK G F+LPYIS VKSPQQ +G +IK ++ ++LG
Sbjct: 157 VVEDERSKSSLPMIASACPGWICYAEKQLGSFVLPYISSVKSPQQTIGVIIKNYVCQELG 216
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADFY-----------NEELGYRDVDCVITAVE-LEVL 279
+ P +YHVT+MPCYDKKLEA+R DF +E +VD V+T E LE++
Sbjct: 217 LRPEEVYHVTVMPCYDKKLEAARDDFVFQFESHAEGRESEINMISEVDSVLTTGEVLELI 276
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE--S 337
+ E+ +L E LD N L SGGYA + +A + L +
Sbjct: 277 QSKEVDFKSLDET---TLDKILTNINEDGYLYGVSGSSGGYAETIFRYAAKTLFGRQIDG 333
Query: 338 PVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
P+ FK +RN D +E T G L+F + GFRN+QN+++KLK + Y F+EIMACP
Sbjct: 334 PLT-FKNIRNSDFQEVTLEVEGKTVLKFALCYGFRNLQNIVRKLKTGKCDYHFLEIMACP 392
Query: 397 SGCLNGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKG 455
SGCLNGG QI+ SPKE + LE++ + ++ + P +N ++ LY WL + K
Sbjct: 393 SGCLNGGGQIKPSSGQSPKELSQLLESVYMENVLVASPFDNPIVKGLYDKWLEQPGSVKA 452
Query: 456 KHMLNTSYHNIPKN 469
++T YH + K+
Sbjct: 453 GRYMHTQYHPVEKS 466
>gi|170092281|ref|XP_001877362.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647221|gb|EDR11465.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 494
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 204/507 (40%), Positives = 279/507 (55%), Gaps = 50/507 (9%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIP-IEKPSGPRTGAKIRIQDDGAYIQETNGRE----- 59
FSG L LTDL+DFI P+Q CIKP+ +EK +G +I I GAY E +G +
Sbjct: 3 FSGALTLTDLNDFITPAQACIKPVEHVEKEAG-TADTEIHIDSSGAYY-EVSGNDSSSQP 60
Query: 60 ----EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
++L++ +ISL DCLACSGCITSAESVLIT QSH EV+ + N +SS+E+ K
Sbjct: 61 TSSGKQLEQAQISLNDCLACSGCITSAESVLITLQSHTEVLNFLEAN----SSSSESYKI 116
Query: 116 IVLSLAIQPVLSLGAKFA------LSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVE 168
V+S+A Q + SL A + ++ QV+ ++ F K LG V D A +L E
Sbjct: 117 PVISIAPQSLASLAASLSHSSPTPITPRQVLRRVELFCKNVLGFAHVFDTTFARHLALRE 176
Query: 169 LENEFLDRFL--SGGG-------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMG 219
EF +R L GG P+ S CPGW+CYAEK+H E +LP+I+ KSPQQVMG
Sbjct: 177 HVAEFEERRLKDQAGGEDAVGQLPMLASACPGWICYAEKAHSE-MLPFIATTKSPQQVMG 235
Query: 220 SLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVL 279
+L+K + K G P +YHV++MPCYDKKLEASR DFYNE RDVDCVIT ELE++
Sbjct: 236 TLVKEWMGAKWGKLPQDVYHVSVMPCYDKKLEASRQDFYNETYSTRDVDCVITTGELELM 295
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPH----RMLLVNGTGSGGYAHNVLSHAIRQLCPG 335
+ + +L E D D PW + +L G+ SG Y +++SH
Sbjct: 296 MREKEWNLSLPRELD---DAPWQSSSSSFDLPELLQHPGSSSGSYLQSIVSHLT---ASS 349
Query: 336 ESPV-VEFKPLRNPDIREATFT---CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIE 391
P+ + K LRN D E T G++ + GFRN+QN+++K + YD+IE
Sbjct: 350 SIPLQLSVKTLRNADYEEHVLTEVGSGNIVFKGAKCYGFRNLQNVVRKTQHSGRSYDYIE 409
Query: 392 IMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENAT-LEHLYKAWLGGK 450
+MACP GC+NGG Q++ KE ++E + D E A + L L K
Sbjct: 410 VMACPGGCVNGGGQLKVPAWGD-KEWTRKVEEVYWDDRTPAAVELADRMTELVHRELCSK 468
Query: 451 STDKGKHMLNTSYHNIPKNNIALNVKW 477
+ G ++L T Y + I L VKW
Sbjct: 469 ERE-GGNILRTQYRAVESEVIGLAVKW 494
>gi|356522067|ref|XP_003529671.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
[Glycine max]
Length = 474
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/492 (37%), Positives = 271/492 (55%), Gaps = 52/492 (10%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L++ DL+D+I PSQ CI + G K ++D + N ++
Sbjct: 2 SEKFSAALRIGDLNDYIAPSQACIVSL---------KGLK---KNDKPEVSIAN-KQVNF 48
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+ V+ISL DCLACSGC+TSAE+V++ +QS +E + NN + K +++SL+
Sbjct: 49 EPVKISLKDCLACSGCVTSAETVMLEKQSLDEFL-----NNINSG------KAVIVSLSP 97
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS--- 179
Q S+ F +S Q KL FFK LGV V D + +LVE EF+ R+
Sbjct: 98 QSRASIAVHFGISPIQAFKKLTRFFKSLGVKAVFDTSCSRDLTLVESCVEFITRYRQNQL 157
Query: 180 -------GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
P+ S CPGW+CYAEK G F+LPYIS VKSPQQ +G++IK ++ ++LG+
Sbjct: 158 VDDERSKSSLPMIASACPGWICYAEKQLGSFVLPYISSVKSPQQTVGAIIKNYVCQELGL 217
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFY-----------NEELGYRDVDCVITAVE-LEVLL 280
P +YHVT+MPCYDKKLEA+R DF +E +VD V+T E LE++
Sbjct: 218 RPEEVYHVTVMPCYDKKLEAARDDFVFQFESHVEGLESEINMISEVDSVLTTGEVLELIQ 277
Query: 281 ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE-SPV 339
+ E+ +L+E LD N L SGGYA + +A + L +
Sbjct: 278 SKEVDFKSLEETP---LDKILTNINEEGYLYGVHGSSGGYAETIFRYAAKTLFGRQIDDP 334
Query: 340 VEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSG 398
+ F+ +RN D +E T G L+F + GFRN+QN+++KLK + Y F+EIMACPSG
Sbjct: 335 LTFRNIRNSDFQEVTLEVEGKTVLKFALCYGFRNLQNIVRKLKNGKCDYHFLEIMACPSG 394
Query: 399 CLNGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKH 457
CLNGG QI+ SPKE + LE++ + ++ + P +N ++ LY WL + K +
Sbjct: 395 CLNGGGQIKPNSGQSPKELSQLLESVYMENVLVASPFDNPIIKGLYDKWLEQPGSVKARR 454
Query: 458 MLNTSYHNIPKN 469
++T YH + K+
Sbjct: 455 YMHTQYHPVEKS 466
>gi|16754852|emb|CAD10687.1| Narf-like protein [Medicago truncatula]
Length = 479
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 268/493 (54%), Gaps = 49/493 (9%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L++ DL+DFI PSQ CI + + + K+ + R+ K
Sbjct: 2 SEKFSPALRIGDLNDFIAPSQACIVSLKGFNKTDKKKPDKVEVS--------IADRQVKS 53
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+ V+ISL DCLACSGC+TSAE+V++ +Q +E + I + K +++S++
Sbjct: 54 EPVKISLKDCLACSGCVTSAETVMLEKQGLDEFLSNINKG-----------KAVIVSVSP 102
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS--- 179
Q S+ F +S Q KL FFK LGV + D + +LVE EF+ R+
Sbjct: 103 QSRTSIATHFGISAVQAFKKLTRFFKSLGVRAIFDTSCSRDLTLVESCVEFITRYRQNQL 162
Query: 180 -------GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
P+ S CPGW+CYAEK G F+LPYIS VKSPQQ +G++IK ++ + + +
Sbjct: 163 VDDERSKSSLPMIASACPGWICYAEKQLGSFVLPYISSVKSPQQTIGTIIKRYVCQDMEL 222
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFY-----------NEELGYRDVDCVITAVE-LEVLL 280
P +YHVT+MPCYDKKLEASR DF E +VD V+T E LE++
Sbjct: 223 RPEEVYHVTVMPCYDKKLEASRDDFVFQLDPHAEGHEGEVNMISEVDSVLTTGEILELIQ 282
Query: 281 ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG--ESP 338
+ E+ +L+E LD N L SGGYA + +A + L + P
Sbjct: 283 SKEVDFKSLEE---APLDKLLTNVNEEGDLYGVRGSSGGYAETIFRYAAKTLFGRHIDGP 339
Query: 339 VVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPS 397
++F+ +RN D +E T G+ L+F + GFRN+QN ++KLK + Y F+EIMACPS
Sbjct: 340 -LDFRNIRNSDFQEVTLEVEGETVLKFALCYGFRNLQNTVRKLKTGKYDYHFLEIMACPS 398
Query: 398 GCLNGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKGK 456
GCLNGG QI+ S KE + LE++ + ++ +EP +N ++ LY WL ++K +
Sbjct: 399 GCLNGGGQIKPVSGQSAKELSHLLESVYMENVLPAEPFDNPIIKGLYDNWLEQPGSEKAR 458
Query: 457 HMLNTSYHNIPKN 469
++T YH + K+
Sbjct: 459 RFMHTQYHAVKKS 471
>gi|195552323|ref|XP_002076430.1| GD17698 [Drosophila simulans]
gi|194201683|gb|EDX15259.1| GD17698 [Drosophila simulans]
Length = 288
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 194/269 (72%), Gaps = 4/269 (1%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SR S LQLTD+DDFI PSQ CIKP+ I+K +TGAKI+I+ D + +E+ KL
Sbjct: 2 SRLSTALQLTDIDDFITPSQICIKPVQIDKARS-KTGAKIKIKGDSCF-EESESGNLKLN 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KV+ISL DCLACSGCITSAE VLITQQS EE++KV++EN+ +KAS + +N +TIV++LA
Sbjct: 60 KVDISLQDCLACSGCITSAEEVLITQQSQEELLKVLQENSKNKASEDWDNVRTIVITLAT 119
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ + E L G+F+ LG D VL +A +L+E EF+DR+
Sbjct: 120 QPILSLAHRYQIGVEDAARHLNGYFRSLGADYVLSTKVADDIALLECRQEFVDRYRENEN 179
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
+ +S CPGWVCYAEK+HG FILPY+S +SPQQ+MG L+K LA+K+ V S IYHVT
Sbjct: 180 LTMLSSSCPGWVCYAEKTHGNFILPYVSTTRSPQQIMGVLVKQILADKINVPASRIYHVT 239
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCV 270
+MPCYDKKLEASR DF+++ RDVDC+
Sbjct: 240 VMPCYDKKLEASREDFFSKANNSRDVDCL 268
>gi|357467417|ref|XP_003603993.1| Cytosolic Fe-S cluster assembly factor NARFL [Medicago truncatula]
gi|355493041|gb|AES74244.1| Cytosolic Fe-S cluster assembly factor NARFL [Medicago truncatula]
Length = 483
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 268/493 (54%), Gaps = 49/493 (9%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L++ DL+DFI PSQ CI + + + K+ + R+ K
Sbjct: 6 SEKFSPALRIGDLNDFIAPSQACIVSLKGFNKTDKKKPDKVEVS--------IADRQVKS 57
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+ V+ISL DCLACSGC+TSAE+V++ +Q +E + I + K +++S++
Sbjct: 58 EPVKISLKDCLACSGCVTSAETVMLEKQGLDEFLSNINKG-----------KAVIVSVSP 106
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS--- 179
Q S+ F +S Q KL FFK LGV + D + +LVE EF+ R+
Sbjct: 107 QSRTSIATHFGISPVQAFKKLTRFFKSLGVRAIFDTSCSRDLTLVESCVEFITRYRQNQL 166
Query: 180 -------GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
P+ S CPGW+CYAEK G F+LPYIS VKSPQQ +G++IK ++ + + +
Sbjct: 167 VDDERSKSSLPMIASACPGWICYAEKQLGSFVLPYISSVKSPQQTIGTIIKRYVCQDMEL 226
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFY-----------NEELGYRDVDCVITAVE-LEVLL 280
P +YHVT+MPCYDKKLEASR DF E +VD V+T E LE++
Sbjct: 227 RPEEVYHVTVMPCYDKKLEASRDDFVFQLDPHAEGHEGEVNMISEVDSVLTTGEILELVQ 286
Query: 281 ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG--ESP 338
+ E+ +L+E LD N L SGGYA + +A + L + P
Sbjct: 287 SKEVDFKSLEE---APLDKLLTNVNEEGDLYGVRGSSGGYAETIFRYAAKTLFGRHIDGP 343
Query: 339 VVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPS 397
++F+ +RN D +E T G+ L+F + GFRN+QN ++KLK + Y F+EIMACPS
Sbjct: 344 -LDFRNIRNSDFQEVTLEVEGETVLKFALCYGFRNLQNTVRKLKTGKYDYHFLEIMACPS 402
Query: 398 GCLNGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKGK 456
GCLNGG QI+ S KE + LE++ + ++ +EP +N ++ LY WL ++K +
Sbjct: 403 GCLNGGGQIKPVSGQSAKELSHLLESVYMENVLPAEPFDNPIIKGLYDNWLEQPGSEKAR 462
Query: 457 HMLNTSYHNIPKN 469
++T YH + K+
Sbjct: 463 RFMHTQYHAVKKS 475
>gi|289540933|gb|ADD09604.1| ferredoxin hydrogenase [Trifolium repens]
Length = 495
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 187/522 (35%), Positives = 276/522 (52%), Gaps = 75/522 (14%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L++ DL+DFI PSQ CI + +G + K+ + RE KL
Sbjct: 2 SEKFSPALRIGDLNDFIAPSQACIVSL-----NGKKKPDKVEVS--------IADREVKL 48
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+ V+ISL DCLACSGC+TSAE+V++ +Q +E M I + K +++S++
Sbjct: 49 EPVKISLKDCLACSGCVTSAETVMLEKQGLDEFMSTISKG-----------KAVIVSVSP 97
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL---- 178
Q S+ A F +S Q KL FFK LGV + D + +LVE EF+ R+
Sbjct: 98 QSRASIAAHFGVSPLQAFKKLTRFFKSLGVRAIFDTSCSRDLTLVESCLEFITRYRQSQL 157
Query: 179 ------SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
+ P+ S CPGW+CYAEK G F+LPYIS VKSPQQ +G++IK ++ + + +
Sbjct: 158 IDDERSNSSLPMIASACPGWICYAEKKLGSFVLPYISSVKSPQQTIGTIIKRYVCQDMEL 217
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRD-----------VDCVITAVE-LEVLL 280
P ++HVT+MPCYDKKLEASR DF + + D VD V+T E LE++
Sbjct: 218 RPEEVHHVTVMPCYDKKLEASRDDFVFQLEPHADGSEGEVNMISEVDSVLTTGEILELIQ 277
Query: 281 ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG--ESP 338
+ E+ +L+E LD N L SGGYA + +A + L + P
Sbjct: 278 SKEVDFKSLEEAP---LDKLLTNINDEGYLYGVRGSSGGYAETIFRYAAKTLFGRHIDGP 334
Query: 339 VVEFKPLRNPDIREAT----------------------FTCGDVTLRFCIANGFRNIQNL 376
+ F+ +RN D +E T F G+ L+F + GFRN+QN+
Sbjct: 335 -LNFRNIRNSDFQEVTLEASRATSFVIIFISVLIPKSGFVEGETVLKFALCYGFRNLQNI 393
Query: 377 IQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETI-LCDLAKSEPRE 435
++KLK + Y F+EIMACPSGCLNGG QI+ S K+ + LE++ L ++ ++P +
Sbjct: 394 VRKLKTGKYDYHFLEIMACPSGCLNGGGQIKPIPGQSAKQLSQLLESVYLENVLAADPFD 453
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
N ++ LY WL ++K K ++T YH I K+ + W
Sbjct: 454 NPIIKGLYDKWLEQPGSEKAKRYMHTQYHPIEKSVTSQLHNW 495
>gi|355706352|gb|AES02609.1| nuclear prelamin A recognition factor-like protein [Mustela
putorius furo]
Length = 274
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/276 (52%), Positives = 197/276 (71%), Gaps = 10/276 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQ+C+KP+ ++K +G AKI I++DG+Y Q +G +K
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQDCVKPMKVDKSTGSGM-AKIHIEEDGSYFQVRQDGGTQK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ K++ +A+K ++ + +V+S++
Sbjct: 61 LEKAKISLGDCLACSGCVTSAETVLITQQSHEELRKIL---DANKTAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLTPTDTAKKLTAFFKKIGVHYVFDTAFSRNFSLLESQREFVQRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+ TS CPGW+CYAEK+HG F++P++S +SPQQVMGSL+K A++ + P
Sbjct: 178 SSTQTLPVLTSACPGWICYAEKTHGSFLVPHLSTARSPQQVMGSLVKDFFAQQQHLTPDR 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVIT 272
IYHVT+MPCYDKKLEASR DF+++E RDVDCV+T
Sbjct: 238 IYHVTVMPCYDKKLEASRPDFFSQEHQTRDVDCVVT 273
>gi|357472589|ref|XP_003606579.1| Cytosolic Fe-S cluster assembly factor NARFL [Medicago truncatula]
gi|355507634|gb|AES88776.1| Cytosolic Fe-S cluster assembly factor NARFL [Medicago truncatula]
Length = 570
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 187/495 (37%), Positives = 268/495 (54%), Gaps = 54/495 (10%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L++ D++DFI PSQ C + + P ++++ D R+ K
Sbjct: 94 SEKFSPALRIGDVNDFIVPSQACTVSLKERRLKKP-DKVEVKVAD----------RQVKS 142
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
K V+ISL DCLACSGC+TSAE+VL+ Q +E + I E KT+++S++
Sbjct: 143 KPVKISLKDCLACSGCVTSAETVLLNNQGLDEFLSNINEG-----------KTVIVSVSP 191
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS--- 179
Q S+ A F +S QV KL FFK LGV V D + +LVE EF+ R+
Sbjct: 192 QSRASIAAHFRISPLQVFKKLTRFFKSLGVRAVFDTSCSRDLTLVESCVEFVSRYRKNQF 251
Query: 180 -------GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
P+ +S CPG +CYAEKSHG +LPYIS VKSPQQ +G++IK +L + + +
Sbjct: 252 VDDERSKSSLPMISSACPGLICYAEKSHGSVLLPYISSVKSPQQTIGTIIKRYLCQDMEL 311
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRD------------VDCVITAVE-LEVL 279
P +YHVT+MPCYDKKLEASR DF + + D VD V+T E LE++
Sbjct: 312 RPEEVYHVTVMPCYDKKLEASRDDFVFQLESHFDEGREGEVNRVLEVDSVLTTGEILELI 371
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG--ES 337
+ E+ +L+E LD N L SGGYA + +A + L +
Sbjct: 372 QSKEVDFKSLEE---APLDKLLSNINEEGHLYGVRGSSGGYAETIFRYAAKTLFGRHIDG 428
Query: 338 PVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
P + F+ ++N D +E T G+ L+F + GF N+Q I KLK + Y F+EIMACP
Sbjct: 429 P-LNFRNIKNSDYQEVTLEVDGETVLKFALCYGFSNLQKNIPKLKVGKSDYHFLEIMACP 487
Query: 397 SGCLNGGAQIRNEKVASPKETALELETILCD--LAKSEPRENATLEHLYKAWLGGKSTDK 454
SGCLNG QI+ S KE + LE++ + LA EP +N ++ LY WLG ++K
Sbjct: 488 SGCLNGAGQIKPISGQSAKELSQLLESVYMENVLAIEEPFDNPIIKGLYDKWLGQPGSEK 547
Query: 455 GKHMLNTSYHNIPKN 469
+ ++T YH + K+
Sbjct: 548 ARSYMHTQYHPVQKS 562
>gi|281204416|gb|EFA78611.1| nuclear prelamin A recognition factor-like protein [Polysphondylium
pallidum PN500]
Length = 431
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 186/467 (39%), Positives = 260/467 (55%), Gaps = 59/467 (12%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
S +FS +L+LT+LDDFI PSQECIKP+ I K + K+ I DG+Y++ + G + K
Sbjct: 2 SDKFSSILKLTELDDFITPSQECIKPVEISKS---KKSTKVDIDKDGSYVEIDEFGEKTK 58
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K I+L DCLACSGCITSAESVLIT QS E V+ N + + KTIV+S++
Sbjct: 59 LEKATITLNDCLACSGCITSAESVLITAQSITEFQNVLNANTSSTTAVAIAKKTIVISIS 118
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDR---- 176
Q S+ A F L + V KL FKR L D V DV FSL+E EF+ R
Sbjct: 119 PQSRASIAAHFNLPIKIVQRKLEILFKRILNCDYVFDVSFGREFSLLESAAEFVARHRKQ 178
Query: 177 FLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
+ P+ S CPGW+CYAEKSHGE+ILPYIS KSPQQ+MG+L+K +L EK
Sbjct: 179 LENAPLPMLCSACPGWICYAEKSHGEYILPYISTTKSPQQIMGTLVKYYLGEK------- 231
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
F N+ RDVDCV+++ E+ LL + E+K+
Sbjct: 232 --------------------FLNK--NSRDVDCVLSSSEVLDLLKEKSIDFVGLEDKE-- 267
Query: 297 LDWPWDEHNPHRML---LVNGTGS--------GGYAHNVLSHAIRQLCPGESPVVEFKPL 345
+E +P + + L + TGS GGY + +A ++L E +E++
Sbjct: 268 -----EEIDPQQQMFRYLDSETGSPYGVEGSTGGYFEFLYRYAAKELFGVEVKEIEYQVG 322
Query: 346 RNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
RN D +EA+ G + F A GFRNIQN+++K+K +LPYDF+E+MACPSGC+NGG
Sbjct: 323 RNTDFKEASLVVDGKKVMTFAKAYGFRNIQNVVRKIKIGKLPYDFVEVMACPSGCINGGG 382
Query: 405 QIR--NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGG 449
QI+ +E + K + E + +P+++ + +YK WL G
Sbjct: 383 QIKAGSESLRDQKVLIQQAEDRYNEQQLLQPQQDQQINEIYKQWLNG 429
>gi|84794308|emb|CAJ55835.1| hypothetical protein [Medicago truncatula]
Length = 478
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 187/495 (37%), Positives = 267/495 (53%), Gaps = 54/495 (10%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +FS L++ D++DFI PSQ C + + P ++++ D R+ K
Sbjct: 2 SEKFSPALRIGDVNDFIVPSQACTVSLKERRLKKP-DKVEVKVAD----------RQVKS 50
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
K V+ISL DCLACSGC+TSAE+VL+ Q +E + I E KT+++S++
Sbjct: 51 KPVKISLKDCLACSGCVTSAETVLLNNQGLDEFLSNINEG-----------KTVIVSVSP 99
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS--- 179
Q S+ A F +S QV KL FFK LGV V D + +LVE EF+ R+
Sbjct: 100 QSRASIAAHFRISPLQVFKKLTRFFKSLGVRAVFDTSCSRDLTLVESCVEFVSRYRKNQF 159
Query: 180 -------GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
P+ +S CPG +CYAEKSHG +LPYIS VKSPQQ +G++IK +L + + +
Sbjct: 160 VDDERSKSSLPMISSACPGLICYAEKSHGSVLLPYISSVKSPQQTIGTIIKRYLCQDMEL 219
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRD------------VDCVITAVE-LEVL 279
P +YHVT+MPCYDKKLEASR DF + + D VD V+T E LE++
Sbjct: 220 RPEEVYHVTVMPCYDKKLEASRDDFVFQLESHFDEGREGEVNRVLEVDSVLTTGEILELI 279
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG--ES 337
+ E+ +L+E LD N L SGGYA + +A + L +
Sbjct: 280 QSKEVDFKSLEE---APLDKLLSNINEEGHLYGVRGSSGGYAETIFRYAAKTLFGRHIDG 336
Query: 338 PVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
P + F+ ++N D +E T G+ L+F + GF N+Q I KLK + Y F+EIMACP
Sbjct: 337 P-LNFRNIKNSDYQEVTLEVDGETVLKFALCYGFSNLQKNIPKLKVGKSDYHFLEIMACP 395
Query: 397 SGCLNGGAQIRNEKVASPKETALELETILCD--LAKSEPRENATLEHLYKAWLGGKSTDK 454
SGCLNG QI+ S KE + LE++ + LA EP +N ++ LY WLG +K
Sbjct: 396 SGCLNGAGQIKPISGQSAKELSQLLESVYMENVLAIEEPFDNPIIKGLYDKWLGQPGFEK 455
Query: 455 GKHMLNTSYHNIPKN 469
+ ++T YH + K+
Sbjct: 456 ARSYMHTQYHPVQKS 470
>gi|145344368|ref|XP_001416706.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576932|gb|ABO94999.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 473
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 179/474 (37%), Positives = 266/474 (56%), Gaps = 31/474 (6%)
Query: 6 FSGVLQLT--DLDDFIGPSQECIKPIP--IEKPSGPRTGAKIRIQDD-GAYIQETNGREE 60
FSG +++ L+DFI PSQ+C+ + + PR + + + + T + +
Sbjct: 2 FSGAVKIAPDALNDFIAPSQDCVVALDGVALRRRKPREDDAMAVDAEPTSTFTPTMTQGD 61
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
LK +SL+DCLACSGC+TSAESVL+ QQS +E + A + ++ T +V S+
Sbjct: 62 ALK---VSLSDCLACSGCVTSAESVLLEQQSVDEFAQ------ACARARSDGTSVVVASV 112
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q ++SL + L E+ A+L G K G D + +LVE EF +
Sbjct: 113 SPQSLMSLSEAYGLGVEETRARLGGLLKAGFGAARAFDTSFSRDIALVETFAEFTEWMRD 172
Query: 180 GG-GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
G P+ S CPGWVCYAEK+HGE +P+++ KSPQQ+MG +K+ +A +LGV ++Y
Sbjct: 173 GARTPMLASACPGWVCYAEKTHGELAVPHMATTKSPQQIMGRFVKSAVARELGVPAHNVY 232
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD 298
HV++MPCYDKKLEA+R DF E G +DVD V+T E+ +LL + L++ D
Sbjct: 233 HVSVMPCYDKKLEATRDDF--ESDGVKDVDVVLTTGEVALLL-EKAGLCHLRDAPANDFD 289
Query: 299 W--PWDEHNPHRMLLVNG-TGSGGYAHNVLSHAIRQLCPGESPV---VEFKPLRNPDIRE 352
+E P + +GSGGYA V A +L +P+ +++ +RN D+RE
Sbjct: 290 AFVSTNEQAPESVCAAPAVSGSGGYAEYVFRRAAAELF--NAPITGEIDWVKMRNADMRE 347
Query: 353 ATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
AT T G+ LR +A GFRNIQNL++ +K K+ + F+EIMACPSGCLNGG QI +
Sbjct: 348 ATLTINGEAVLRVAVAYGFRNIQNLVRSIKLKKSKHHFVEIMACPSGCLNGGGQIPAREG 407
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGK-STDKGKHMLNTSYH 464
+ KE L+ + A++ P A + LY+ W+GG + + L T YH
Sbjct: 408 TANKELIDRLDDTYRENARARPM--ADVSTLYREWIGGNPGSSNAREALRTQYH 459
>gi|393217461|gb|EJD02950.1| iron hydrogenase [Fomitiporia mediterranea MF3/22]
Length = 634
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 254/508 (50%), Gaps = 111/508 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPR----TGAKIRIQDDGAYIQ-------E 54
FSG L LTDL+DFI PSQ CIKP+ P R +IRI GAY + +
Sbjct: 3 FSGALTLTDLNDFITPSQACIKPVQQSNPQTSRDEGAASTQIRIDSSGAYYEVSSTDASD 62
Query: 55 TNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTK 114
+ KL+ +ISL DCLACSGCITSAESVLIT QSHEEV+ V+ N + + K
Sbjct: 63 SKTSARKLETAQISLNDCLACSGCITSAESVLITMQSHEEVLNVLASNPSPICVDH---K 119
Query: 115 TIVLSLAIQPVLSLGAKFALSHEQVVA------KLCGFFKRLGVDLVLDVGIAHCFSLVE 168
T VLS++ Q + SL A + + VA ++ F + LG + V D A +L+E
Sbjct: 120 TPVLSISPQSLASLAATISSTSTNTVALAHVFHRVAAFARELGFEHVYDTTFARHLALLE 179
Query: 169 LENEFLDRF-----------LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQV 217
+EF +R +G P+ S CPGWVCYAEK+H E +LP+ISR KSPQQV
Sbjct: 180 HAHEFHERKHGTTNGIDGEDAAGKLPMLASACPGWVCYAEKTHAE-MLPFISRTKSPQQV 238
Query: 218 MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELE 277
MG+L+K L+EK G P+ IYHVT+MPCYDKKLEASR DFYN+ RDVDCVIT EL+
Sbjct: 239 MGTLVKNWLSEKWGKKPNQIYHVTVMPCYDKKLEASRQDFYNDLYSTRDVDCVITTGELQ 298
Query: 278 VLLAN-------------------ELATTTL------QEEKDGILDWPWDEHNPH----- 307
++ E+ T+ L ++E+D I P
Sbjct: 299 RMMRERNWAWDLLKPVPGPSETGIEVETSLLSKSKAEEDEEDTIPIPKQKSEGPSYSLTL 358
Query: 308 -RMLLVNGTGSGGYAHNVLS--HAIRQLCPGESPVVEFKPLRNPDIREATFTC---GDVT 361
+LL G+ SG Y H++LS L P + + +R D E G +
Sbjct: 359 PSLLLHPGSSSGSYLHSLLSTIQDTAHLSGQAEPKLTIRQVRGADFEEYLLRAPDTGKIV 418
Query: 362 LRFCIANGFRNIQNLIQKLKRK-----------RL------------------------- 385
+ GFRN+QN+++++ R RL
Sbjct: 419 FKGARCYGFRNLQNVVRRVGRAAGVQVGRGAAGRLANVRAKTRIKRRTANNSNGAIEGDN 478
Query: 386 -------PYDFIEIMACPSGCLNGGAQI 406
PYD++E+MACP GC+NGG Q+
Sbjct: 479 LEEEEDRPYDYVEVMACPGGCVNGGGQL 506
>gi|414872782|tpg|DAA51339.1| TPA: hypothetical protein ZEAMMB73_806611, partial [Zea mays]
Length = 423
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/439 (41%), Positives = 254/439 (57%), Gaps = 37/439 (8%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M+SSRFS VLQ +DL+DFI PSQ+CI I + K T + R+Q + + T +
Sbjct: 1 MSSSRFSPVLQASDLNDFIAPSQDCI--ISLNK----NTSSSRRLQKNQK--ETTVSSKP 52
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
+ V+ISL DCLACSGCITSAE+V++ +QS + + I + K +++S+
Sbjct: 53 PEEAVKISLKDCLACSGCITSAETVMLEKQSLSDFIDHINSD-----------KAVIVSV 101
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q SL A F LS QV+ KL FK +GV V D + SL+E NEF+ R+
Sbjct: 102 SPQSRASLAAFFGLSQSQVLRKLTALFKSIGVKAVFDTSSSRDLSLIEACNEFVSRYQKN 161
Query: 181 GG----------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
P+ +S CPGW+CYAEK+ G +ILPYIS VKSPQQ +G+ IK H+ +KL
Sbjct: 162 HSCSGQEAGANLPMISSACPGWICYAEKTLGSYILPYISSVKSPQQAIGAAIKHHVVDKL 221
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELG--YRDVDCVITAVE-LEVLLANELATT 287
G+ P +YHVT+MPCYDKKLEA R DF G ++VD V+T E L+++ + +
Sbjct: 222 GLKPYDVYHVTVMPCYDKKLEAVRDDFTFSVDGKEVKEVDSVLTTGEVLDLIQSKSIDFK 281
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE-SPVVEFKPLR 346
T++E LD + L GSGGYA V + + E ++F+ LR
Sbjct: 282 TVEESS---LDRLLTNVDEEGHLYGVSGGSGGYAETVFRYGANVIYKREIEGPLDFRILR 338
Query: 347 NPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
N D RE T G L+F + GFRN+QN+++K+K + Y FIE+MACPSGCLNGG Q
Sbjct: 339 NSDFREITLEVEGKPVLKFALCYGFRNLQNIVRKIKMGKCEYHFIEVMACPSGCLNGGGQ 398
Query: 406 IRNEKVASPKETALELETI 424
++ + S KE +LE++
Sbjct: 399 LKPVQGQSAKELIQQLESV 417
>gi|345806724|ref|XP_537935.3| PREDICTED: nuclear prelamin A recognition factor isoform 2 [Canis
lupus familiaris]
Length = 456
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 240/461 (52%), Gaps = 19/461 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K E G QD G KL +I L+DCLAC C+T+
Sbjct: 9 KECNKKTKTEDQENASVGVPSLAQD-----HTEKGEFHKLADAKIFLSDCLACDSCVTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E + ++QQ+ ++ +V+ N +K K + +S+ Q + AKF LS +
Sbjct: 64 EGLQVSQQNVKDFFRVL---NLNKKCDPSQHKVLAVSVCPQSLPYFAAKFRLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYQQHSEEEPALPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G + P++ KSPQQ+MGSL+K + A + + P I+HV + PCYDKKLEA R DF
Sbjct: 181 RVLGHPVTPHLCTAKSPQQIMGSLVKDYFARQQNLSPDKIFHVIVAPCYDKKLEALREDF 240
Query: 258 YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGS 317
G+R DCV+T+ E+ ++ T KD +D + + +G S
Sbjct: 241 PTAPHGFRSADCVLTSGEIAQIMEQSDLTV-----KDAAVDTVFGGLKEEEVRRHDGASS 295
Query: 318 GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNL 376
GY +V HA +QL + V ++ LRN D +E T G+V LRF A GFRNIQN+
Sbjct: 296 DGYLAHVFRHAAKQLFDEDVGEVTYRTLRNKDFQEVTLEKNGEVLLRFAAAYGFRNIQNV 355
Query: 377 IQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPREN 436
+ KLK+ R PY F+E++AC GCLNG Q + E + K ++E I D+ P +
Sbjct: 356 VLKLKKGRFPYHFVEVLACAGGCLNGRGQAQTEDGRADKALLRQMEGIYADIPVRPPESS 415
Query: 437 ATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
A ++ LY+ WL G + + + L+T Y ++ ++KW
Sbjct: 416 AHVQELYQEWLDGADSPRAQEALHTKYQGPGLPALSRDIKW 456
>gi|133778355|gb|AAI23769.1| MGC143399 protein [Bos taurus]
Length = 362
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/287 (51%), Positives = 196/287 (68%), Gaps = 10/287 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFI PSQ+CIKP+ +++ G AKI I+DDG+Y Q +G +K
Sbjct: 2 ASPFSGALQLTDLDDFIAPSQDCIKPMKVDRRPGSGV-AKIHIEDDGSYFQVSQDGGMKK 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K +ISL DCLACSGC+TSAE+VLITQQSHEE+ KV+ A+K ++ + K +V+S++
Sbjct: 61 LEKAKISLDDCLACSGCVTSAETVLITQQSHEELRKVL---GANKTAAPDQQKLVVISVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL +F L+ KL FFK++G V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAVRFQLNPTDTARKLTAFFKKIGAHYVFDTAFSRNFSLLESQREFVRRFRGQA 177
Query: 182 GP-----LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P + TS CPGW+CYAEK+HG +LP+IS +SPQQVMGSL+K A++ + P
Sbjct: 178 DPEQALPVLTSACPGWICYAEKTHGSTLLPHISTARSPQQVMGSLVKDFFAQQQHLTPDK 237
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE 283
+YH T+MPCYDKKLEASR DF+++E RDVDCVIT E+ LL E
Sbjct: 238 VYHATVMPCYDKKLEASRPDFFSQEHQTRDVDCVITTGEVFKLLEEE 284
>gi|301782119|ref|XP_002926478.1| PREDICTED: nuclear prelamin A recognition factor-like [Ailuropoda
melanoleuca]
Length = 456
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 244/462 (52%), Gaps = 21/462 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K E Q++G G KL +I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTEDQENASVDVPSLAQENG-----EKGEFHKLADAKIFLSDCLACDSCVTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E + ++QQ+ ++ +V+ N +K K + +S+ Q + AKF LS +
Sbjct: 64 EGLQVSQQNAKDFFRVL---NLNKKCDVSQHKVLAVSVCPQSLPYFAAKFRLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKGLGVHYVFDTAIAAGFSILESQKEFVRRYQRHSEGEPALPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G + P++ KSPQQ+MGSL+K + A + + P I+HV + PCYDKKLEA R DF
Sbjct: 181 RVLGHPVTPHLCTAKSPQQIMGSLVKDYFARRQNLSPDKIFHVIVAPCYDKKLEALREDF 240
Query: 258 YNEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E ++++ ++LA KD +D + + +G
Sbjct: 241 PTASHGSRGADCVLTSGEIIQIMEQSDLAV------KDAAVDTLFGGLKEEEVRRHDGAS 294
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S GY +V HA +QL + V ++ LRN D +E T G+V LRF A GFRNIQN
Sbjct: 295 SDGYLAHVFRHAAKQLFDEDVGEVTYRTLRNKDFQEVTLEKNGEVLLRFAAAYGFRNIQN 354
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
++ KLK+ R PY F+E++AC GCLNG Q + E + K ++E I D+ P
Sbjct: 355 VVLKLKKGRFPYHFVEVLACAGGCLNGRGQAQTEDGHADKALLRQMEGIYADIPVRPPET 414
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+A ++ LY+ WL G + + + L+T Y ++ ++KW
Sbjct: 415 SAHVQELYQEWLDGVDSPRVQEALHTMYQGPGLRAVSRDIKW 456
>gi|163954939|ref|NP_080548.3| nuclear prelamin A recognition factor [Mus musculus]
gi|81904446|sp|Q9CYQ7.1|NARF_MOUSE RecName: Full=Nuclear prelamin A recognition factor; AltName:
Full=Iron-only hydrogenase-like protein 2; Short=IOP2
gi|12850788|dbj|BAB28853.1| unnamed protein product [Mus musculus]
gi|16359251|gb|AAH16090.1| Nuclear prelamin A recognition factor [Mus musculus]
gi|26349103|dbj|BAC38191.1| unnamed protein product [Mus musculus]
gi|148702887|gb|EDL34834.1| nuclear prelamin A recognition factor [Mus musculus]
Length = 462
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 238/431 (55%), Gaps = 16/431 (3%)
Query: 54 ETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT 113
E G KL +I L+DCLAC C+T E V ++QQS ++ + V+ N +K
Sbjct: 41 EEKGEFHKLADAKIFLSDCLACDSCVTVEEGVQLSQQSAKDFLHVL---NLNKRCDTSKH 97
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
+ +V+S+ Q + AKF LS +LCGF K LGV V D IA FS++E + EF
Sbjct: 98 RVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEF 157
Query: 174 LDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
+ R+ P+ TS CPGWV YAE+ G I+PY+ KSPQQVMGSL+K + A
Sbjct: 158 VRRYHQHSEEQRELPMLTSACPGWVRYAERVLGRPIIPYLCTAKSPQQVMGSLVKDYFAR 217
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATT 287
+ + P I+HV + PCYDKKLEA R G R DCV+T+ E+ +++ ++L+
Sbjct: 218 QQNLSPEKIFHVVVAPCYDKKLEALREGLSTTLNGARGTDCVLTSGEIAQIMEQSDLSV- 276
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
KD +D + + + +G S G+ +V HA ++L + ++ LRN
Sbjct: 277 -----KDIAVDTLFGDMKEVAVQRHDGVSSDGHLAHVFRHAAKELFGEHVEEITYRALRN 331
Query: 348 PDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI 406
D E T G+V LRF A GFRNIQN+IQKLK+ +LPY F+E++ACP GCLNG Q
Sbjct: 332 KDFHEVTLEKNGEVLLRFAAAYGFRNIQNMIQKLKKGKLPYHFVEVLACPRGCLNGRGQA 391
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
+ E + + ++E I + P + ++ LY+ WL G + K + +L+TSY ++
Sbjct: 392 QTEDGHTDRALLQQMEGIYSGIPVRPPESSTHVQELYQEWLEGTESPKVQEVLHTSYQSL 451
Query: 467 PKNNIALNVKW 477
L++KW
Sbjct: 452 EPCTDGLDIKW 462
>gi|26345230|dbj|BAC36265.1| unnamed protein product [Mus musculus]
Length = 462
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 238/431 (55%), Gaps = 16/431 (3%)
Query: 54 ETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT 113
E G KL +I L+DCLAC C+T E V ++QQS ++ + V+ N +K
Sbjct: 41 EEKGEFHKLADAKIFLSDCLACDSCVTVEEGVQLSQQSAKDFLHVL---NLNKRCDTSKH 97
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
+ +V+S+ Q + AKF LS +LCGF K LGV V D IA FS++E + EF
Sbjct: 98 RVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEF 157
Query: 174 LDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
+ R+ P+ TS CPGWV YAE+ G I+PY+ KSPQQVMGSL+K + A
Sbjct: 158 VRRYHQHSEEQRELPMLTSACPGWVRYAERVLGRPIIPYLCTAKSPQQVMGSLVKDYFAR 217
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATT 287
+ + P I+HV + PCYDKKLEA R G R DCV+T+ E+ +++ ++L+
Sbjct: 218 QQNLSPEKIFHVVVAPCYDKKLEALREGLSTTLNGARGTDCVLTSGEIAQIMEQSDLSV- 276
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
KD +D + + + +G S G+ +V HA ++L + ++ LRN
Sbjct: 277 -----KDIAVDTLFGDMKEVAVQRHDGVSSDGHLAHVFRHAAKELFGEHVEEITYRALRN 331
Query: 348 PDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI 406
D E T G+V LRF A GFRNIQN+IQKLK+ +LPY F+E++ACP GCLNG Q
Sbjct: 332 KDFHEVTLEKNGEVLLRFAAAYGFRNIQNMIQKLKKGKLPYHFVEVLACPRGCLNGRGQA 391
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
+ E + + ++E I + P + ++ LY+ WL G + K + +L+TSY ++
Sbjct: 392 QTEDGHTDRALLQQMEGIYSGIPVRPPESSTHVQELYQEWLEGTESPKVQEVLHTSYQSL 451
Query: 467 PKNNIALNVKW 477
L++KW
Sbjct: 452 EPCTDGLDIKW 462
>gi|168052192|ref|XP_001778535.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670133|gb|EDQ56708.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 191/491 (38%), Positives = 258/491 (52%), Gaps = 66/491 (13%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
MASS ++L +D+I SQ C+ + K P +++RI T+
Sbjct: 1 MASS-----VKLGSHNDYISQSQGCVVTMKGFKKQAPAVDSQVRIVSKKETAVSTD---- 51
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
V++SL DCLACSGCIT+AE+V++ QQS V +L
Sbjct: 52 ---PVKVSLHDCLACSGCITTAETVMLEQQS----------------------TGFVSNL 86
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+Q V KL GF K LGV V D + SLVE EF++RF
Sbjct: 87 FLQ----------------VKKLSGFLKSLGVKAVFDTSCSRDISLVESCAEFVERFREK 130
Query: 181 GG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
P+ S CPGWVCYAEK+HG+ +LPYIS VKSPQQVMG+++K ++ + LG+ P +YH
Sbjct: 131 KKFPILASSCPGWVCYAEKTHGDDVLPYISAVKSPQQVMGTILKRYVCKSLGLLPEDVYH 190
Query: 240 VTLMPCYDKKLEASRADFYNEELG----------YRDVDCVITAVELEVLLANELATTTL 289
VT+MPCYDKKLEA+R DF E G +VDCV+T+ E+ LL
Sbjct: 191 VTIMPCYDKKLEAAREDFIFEVEGEGLTEGNKPQITEVDCVLTSGEILDLLQTR--NVVF 248
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE-SPVVEFKPLRNP 348
E ++ LD + L GSGGYA + +A R+L E S ++FK LRN
Sbjct: 249 GELEEVPLDRVLTNVDEREHLYGVSGGSGGYAECIFRYASRELFGKEISGPLQFKTLRNA 308
Query: 349 DIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
D RE T G L+F + GFRNIQN+++++K R Y F+E+MACPSGCLNGG QI+
Sbjct: 309 DFREITLEVDGKQVLKFALVYGFRNIQNIVRQIKAGRCDYHFMEVMACPSGCLNGGGQIK 368
Query: 408 NEKVASPKETALELE-TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
+K + KE +LE L D+ EP EN ++ LYK WLG S++K ++ T YH
Sbjct: 369 PKKGQTAKELIQQLEGAYLNDVDVREPFENEIVKGLYKEWLGYPSSEKASQIMRTQYHVR 428
Query: 467 PKNNIALNVKW 477
K W
Sbjct: 429 EKTVANFVSDW 439
>gi|417401268|gb|JAA47525.1| Putative nuclear architecture related protein [Desmodus rotundus]
Length = 456
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 247/462 (53%), Gaps = 21/462 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K + P GA QD G G KL +I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTDDPENASVGAPSPAQDSG-----EKGEFHKLADAKILLSDCLACDSCVTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ + +V+ N +K K + +S+ Q + AK +LS +
Sbjct: 64 EGVQVSQQNARDFFRVL---NLNKKCDTSKHKVLAVSVCPQSLPYFAAKLSLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D+ +A FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDMAVAADFSILESQKEFVRRYHQHSEEEPMLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I P++ KSPQQVMGSL+K + A + + P I+HV + PCYD+KLEA R D
Sbjct: 181 RVLGHPITPHLCTAKSPQQVMGSLVKDYFARRQNLSPDQIFHVIVAPCYDRKLEALREDV 240
Query: 258 YNEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E ++++ ++L+ KD +D + + + T
Sbjct: 241 PTALNGSRAADCVLTSGEIIQMMEQSDLSV------KDAAMDTLSGDRKEEEVRRHDSTS 294
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S G+ +V HA ++L + V ++ LRN D RE T G+V LRF A GFRN+QN
Sbjct: 295 SDGHLAHVFRHAAKELFNEDVGEVTYRTLRNKDFREVTLEKSGEVLLRFAAAYGFRNLQN 354
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
++ KLK+ RLP+ F+E++AC GCL+G Q + E + + ++E I + P
Sbjct: 355 VVLKLKKGRLPFHFVEVLACAGGCLSGRGQAQAEDGRADRALLRQMEGIYAAIPVRAPET 414
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+A ++ LY+ WLGG + + + L+T+Y + + ++KW
Sbjct: 415 SAHVQELYQEWLGGADSPRVREALHTAYQGPGQPASSRDIKW 456
>gi|390602423|gb|EIN11816.1| iron hydrogenase [Punctularia strigosozonata HHB-11173 SS5]
Length = 640
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 193/499 (38%), Positives = 258/499 (51%), Gaps = 102/499 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI----PIEKPSGPRTGA-KIRIQDDGAYIQETNGRE- 59
FSG L LTDL+DFI PSQ CIKP+ P+ + P + +I I G+Y + + ++
Sbjct: 3 FSGALTLTDLNDFITPSQACIKPVEQSTPVPDAAEPGAASTQIHIDSSGSYYEVGSKKQP 62
Query: 60 -EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVL 118
KL++ EI+L DCLACSGCITSAESVLIT QSH EVM + ENN SS+ KT VL
Sbjct: 63 VRKLERAEITLNDCLACSGCITSAESVLITLQSHTEVMSFL-ENNPPPTSSSH--KTPVL 119
Query: 119 SLAIQPVLSLGAKFA-------LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
S+A Q + SL A + +S + V+ ++ F LG + + D A +L+E +
Sbjct: 120 SIAPQSLASLAASISSSSSSPHVSLQAVLRRVQAFCGTLGFEHIYDTTFARHVALLEHAH 179
Query: 172 EFLDRFLSGGG---PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
EF +R S G P+ S CPGWVCYAEK+H E +LP+ISR KSPQQVMG+L+K LA+
Sbjct: 180 EFSERKRSTGEGQLPMLASACPGWVCYAEKTHAE-MLPFISRTKSPQQVMGTLVKEWLAK 238
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL--AT 286
P +YHV +MPCYDKKLEASR DFYN+ RDVDCVIT ELE+L+ + +
Sbjct: 239 SWNKTPDMVYHVAVMPCYDKKLEASRQDFYNDVFKTRDVDCVITTGELELLMREKGWDLS 298
Query: 287 TTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP-------- 338
++ E +G ++ P +L G+ SG Y H ++S R SP
Sbjct: 299 APVKGEAEGSRSAATEDQIPE-LLSHPGSSSGSYLHTLISAITRGSPAAASPGNVQLEGR 357
Query: 339 ---------------------------------VVEFKPLRNPDIREATFT---CGDVTL 362
V K +RN D E T T G+V
Sbjct: 358 REIGGTDSVPYASEVAVSGGRPTPPDGNDGGEYEVSSKIMRNTDFEEYTVTRRSTGEVMF 417
Query: 363 RFCIANGFRNIQNLIQKLKR----------------------------------KRLPYD 388
R GFRN+QN+++K+ R K PYD
Sbjct: 418 RGARCYGFRNLQNVVRKVGRDAGVQVGRGAAGRLTGGVRGRRRGAVSAAGADGEKERPYD 477
Query: 389 FIEIMACPSGCLNGGAQIR 407
++E+MACP GC+NGG Q+R
Sbjct: 478 YVEVMACPGGCVNGGGQLR 496
>gi|395332687|gb|EJF65065.1| iron hydrogenase [Dichomitus squalens LYAD-421 SS1]
Length = 615
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 196/484 (40%), Positives = 250/484 (51%), Gaps = 90/484 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-PIEKPSGPRTGA---KIRIQDDGAYIQ-------- 53
FSG L LTDL+DFI PSQ CIKP+ KP GA +I++ G+Y +
Sbjct: 3 FSGALTLTDLNDFITPSQACIKPVEQTNKPEPQDAGAAATQIQVDSSGSYYEVSTNAPTA 62
Query: 54 -ETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN 112
+T G++ KL EISL DCLACSGCITSAESVLIT QSH EV+ V+ N H S+ +
Sbjct: 63 GQTAGKQ-KLTTAEISLNDCLACSGCITSAESVLITMQSHAEVLNVLENNPPH---SSPD 118
Query: 113 TKTIVLSLAIQ------PVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFS 165
K V+S+A Q +S + +S QV+ ++ F K LG V D A +
Sbjct: 119 HKVPVISIAPQCLASLAASISSSSSQNVSLLQVLRRVSAFCKEVLGFAHVFDTTFARHIT 178
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
L+E EF +R G P+ S CPGWVCYAEK+H E +LP+ISR KSPQQVMG+L+K
Sbjct: 179 LLEHAKEFTERKNGEGKLPMLASACPGWVCYAEKTHAE-MLPFISRTKSPQQVMGTLVKE 237
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE- 283
K G P IYHVT+MPCYDKKLEASR DFYNE RDVDCVIT EL++L+ +
Sbjct: 238 WSGAKWGKTPDQIYHVTVMPCYDKKLEASRQDFYNEAYATRDVDCVITTGELQLLMQEKG 297
Query: 284 -----------------------LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGY 320
T Q G+L D P +L+ GT SG Y
Sbjct: 298 WDLSIPVSDENVPRLTSFSRGAMFGTVDDQRSDPGMLS--ADLAFPE-LLMHPGTSSGSY 354
Query: 321 AHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT---CGDVTLRFCIANGFRNIQNLI 377
H+++S + V K +R D E T T G V R GFRN+QN++
Sbjct: 355 LHSIISTLTSSSSNPDVFEVTTKTVRTADYEEYTVTNRETGQVVFRGAKCYGFRNLQNVV 414
Query: 378 QKLKRK-----------RLP-----------------------YDFIEIMACPSGCLNGG 403
+K+ R RL YD++E+MACPSGC+NGG
Sbjct: 415 RKVGRDSGVQVGRGAAGRLAGLRARGRAVRKDAAGSAAQEDRGYDYVEVMACPSGCVNGG 474
Query: 404 AQIR 407
Q+R
Sbjct: 475 GQLR 478
>gi|348686504|gb|EGZ26319.1| hypothetical protein PHYSODRAFT_258585 [Phytophthora sojae]
Length = 521
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 189/536 (35%), Positives = 277/536 (51%), Gaps = 90/536 (16%)
Query: 12 LTDLDDFIGPSQECIKPI-------PIEKPSGPRTGAKIRIQD-----DGAYIQETNG-- 57
L DL+D+I PSQ C+ P+ P + P AKI +Q D A Q
Sbjct: 6 LGDLNDYIQPSQACVNPLFTSDSVQPDAAGAQPNGLAKITLQTELSAADLAVPQPVKPNI 65
Query: 58 -REEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTI 116
R +K ISL DCLACSGC+TSAE+VLI+QQS +E++ V+ + + K +
Sbjct: 66 IRTTTQEKATISLDDCLACSGCVTSAETVLISQQSFKEMLDVL---------AAKKHKHV 116
Query: 117 VLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR 176
V++L+ Q SL A F + V KL F+ LGV+LV+D + F+L+E EFL R
Sbjct: 117 VVTLSPQSRASLAAHFEMPVVVVHRKLVTLFRNLGVNLVIDSTCSGDFALLESRAEFLHR 176
Query: 177 FLSG------------------------------------GGPLFTSECPGWVCYAEKSH 200
+ + P+ S CPGW+CYAEKS
Sbjct: 177 YHNQQKTVWARPPSSVAVSSAKTEYLEPSTSANPLQDPLRAMPMLASSCPGWICYAEKSQ 236
Query: 201 GEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE 260
I P+I KSPQQ+ GS+IK ++ + GV PS +YHV +MPC+DKKLEASR DF +
Sbjct: 237 PNAI-PFIDTTKSPQQIAGSIIKRFVSGEHGVAPSEVYHVAVMPCFDKKLEASRKDFQDP 295
Query: 261 ELGYRDVDCVITAVELEVLLAN--------ELATTTLQE------EKDGILDWPWDEHNP 306
E +DVDCV+ E+ L+ + E A T +E +DG + +
Sbjct: 296 EDATKDVDCVLATTEIIELIESLNVDFASLEPANLTPEEVMLSGISEDGSVVLGSN---- 351
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGE-SPVVEFKPLRNPDIREATFTC-GDVTLRF 364
VN + SGG+ ++ A ++L E + +E+ RNPD RE + G L+F
Sbjct: 352 -----VNAS-SGGHLEHIFRFAAKELFNVEVTGPLEYVAGRNPDFREVSLVIEGKEVLKF 405
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETI 424
+A GFRNIQ+++ K++R + PY ++EIMACPSGCLNGG QI+ + E + +
Sbjct: 406 AVAYGFRNIQSIMTKIRRNKCPYHYVEIMACPSGCLNGGGQIKPKSTLLASELLDNVTSR 465
Query: 425 LCDLAKSEPRENATLEHLYKAWLGGKS-TDKGKHMLNTSYHNIPK--NNIALNVKW 477
+L +P N + ++Y+ +LGG +D + +L+T YH +PK + L +KW
Sbjct: 466 FEELQVRDPTANPAVNYVYEKYLGGVPFSDAARAVLHTQYHAVPKMEQSNPLGIKW 521
>gi|409044980|gb|EKM54461.1| hypothetical protein PHACADRAFT_185384 [Phanerochaete carnosa
HHB-10118-sp]
Length = 609
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/485 (38%), Positives = 250/485 (51%), Gaps = 102/485 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIP-----IEKPSGPRTGAKIRIQDDGAYIQET----- 55
FSG L LTDL+DFI PSQ CIKP+ + + G +IR+ G+Y + +
Sbjct: 3 FSGALTLTDLNDFITPSQACIKPVEQTNGIVPERDGGAASTEIRVDSTGSYYEVSASDPK 62
Query: 56 --NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT 113
+G + KL+ EISL DCLACSGCITSAESVLI+ QSH EV+ + N S+
Sbjct: 63 ADSGTQRKLQTAEISLNDCLACSGCITSAESVLISMQSHTEVLNFLANNPEDICLSH--- 119
Query: 114 KTIVLSLAIQPVLSLGAKFA-------LSHEQVVAKLCGF-FKRLGVDLVLDVGIAHCFS 165
K V+S+A Q + SL A + +S +QV ++ F K LG V D A +
Sbjct: 120 KVPVISIAPQSLASLAASISSSSKAQPVSLQQVYRRVEAFCTKVLGFQHVYDTTFARHLA 179
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
L+E E+ +R G P+ S CPGW+CY EK+H E +LP+ISR KSPQQVMG+L+K
Sbjct: 180 LLEHTREYKERKRGDGQLPMLASACPGWICYVEKTHAE-MLPFISRTKSPQQVMGTLVKE 238
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
L K G PS IYHVT+MPCYDKKLEASR DFYN+ RDVDCVIT ELE+++
Sbjct: 239 WLGSKWGKTPSQIYHVTVMPCYDKKLEASRQDFYNDVYATRDVDCVITTGELELMM---- 294
Query: 285 ATTTLQEEKDGILDWPWDEHN----PHRMLLVN---------------------GTGSGG 319
EKD L P + N PH L + GT SG
Sbjct: 295 ------REKDWSLSTPVEGENDDRLPHGFLTDDSRGSGAAKFDGDDLPELITHPGTSSGS 348
Query: 320 YAHNVLSHAIRQLCPGESPV---VEFKPLRNPDIREATFT---CGDVTLRFCIANGFRNI 373
Y H++++ + ESP + + +R PD E + GD+ R GFRN+
Sbjct: 349 YLHSLINAIVH-----ESPSALGLNMRAVRAPDYEEYILSEKATGDIVFRGAKCYGFRNL 403
Query: 374 QNLIQKLKRK-------------------------------RLPYDFIEIMACPSGCLNG 402
QNL++K+ R YD++E+MACP GC+NG
Sbjct: 404 QNLVRKVGRDAGVQVGRGAAGRAAGVRGRVVRKKADGSAAPETKYDYVEVMACPGGCVNG 463
Query: 403 GAQIR 407
G Q+R
Sbjct: 464 GGQLR 468
>gi|410982054|ref|XP_003997377.1| PREDICTED: nuclear prelamin A recognition factor [Felis catus]
Length = 456
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 234/429 (54%), Gaps = 16/429 (3%)
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
G KL +I L+DCLAC C+T+ E + ++QQ+ ++ +V+ N +K K
Sbjct: 37 KGEFHKLADAKIFLSDCLACDSCVTAEEGLQVSQQNAKDFFRVL---NLNKKCDTSQHKV 93
Query: 116 IVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
+V+S+ Q + AKF LS +LCGF K LGV V D IA FS++E + EF+
Sbjct: 94 LVVSVCPQSLPYFAAKFRLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSVLESQKEFVR 153
Query: 176 RFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
RF P+ TS CPGWV YAE+ G + P++ KSPQQ+MGSL+K + A +
Sbjct: 154 RFRQHSEEEPALPMLTSACPGWVRYAERVLGHPVTPHLCTAKSPQQIMGSLVKDYFARRQ 213
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE-LEVLLANELATTTL 289
+ P I+HV + PCYD+KLEA R D G R DCV+T+ E ++++ ++LA
Sbjct: 214 NLSPDKIFHVIVAPCYDRKLEALREDVPTALHGSRGADCVLTSGEVVQIMEQSDLAV--- 270
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
KD +D + + +G S GY +V HA +QL + V ++ LRN D
Sbjct: 271 ---KDAAVDTLFGGLKEEEVRRHDGASSDGYLAHVFRHAAKQLFDEDVGEVTYRTLRNKD 327
Query: 350 IREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
+E T G+V LRF A GFRNIQN++ KLK+ R PY F+E++AC GCLNG Q +
Sbjct: 328 FQEVTLEKNGEVLLRFAAAYGFRNIQNVVLKLKKGRFPYHFVEVLACAGGCLNGRGQAQA 387
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
E + K ++E D+ P +A ++ LY+ WL G + + + L+T YH
Sbjct: 388 EDGRADKALLRQMEGKYADVPVRPPETSAHVQELYREWLDGADSPRVREALHTVYHGPGL 447
Query: 469 NNIALNVKW 477
+ ++KW
Sbjct: 448 PAASRDIKW 456
>gi|380811686|gb|AFE77718.1| nuclear prelamin A recognition factor isoform a [Macaca mulatta]
gi|383417473|gb|AFH31950.1| nuclear prelamin A recognition factor isoform a [Macaca mulatta]
gi|384942408|gb|AFI34809.1| nuclear prelamin A recognition factor isoform a [Macaca mulatta]
Length = 456
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 162/462 (35%), Positives = 248/462 (53%), Gaps = 21/462 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K + A Q++G G KL I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTDDQENVSADAPSPAQENG-----EKGEFHKLADARIFLSDCLACDSCVTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 64 EGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTRIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA + F
Sbjct: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQEGF 240
Query: 258 YNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E+ +++ +L+ KD +D + + ++ +G
Sbjct: 241 PPALHGSRGADCVLTSGEIAQIMDQGDLSV------KDAAVDTLFGDLKEDKVTRHDGAS 294
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A GFRNIQN
Sbjct: 295 SDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQN 354
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
+I KLK+ + PY F+E++AC GCLNG Q + + K ++E I D+ P
Sbjct: 355 MILKLKKGKFPYHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPES 414
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 415 SAHMQELYQEWLEGINSPKAREVLHTTYQSQERGAHSLDIKW 456
>gi|363740787|ref|XP_415606.3| PREDICTED: nuclear prelamin A recognition factor [Gallus gallus]
Length = 459
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 231/422 (54%), Gaps = 11/422 (2%)
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L +I L+DCLAC C+TS E + QQ+ +E +++ N +K K + +S+
Sbjct: 43 LANAKILLSDCLACDNCMTSEEGARVFQQNQKEFFRIL---NLNKKCDTSKHKVLAVSIC 99
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q + AKF+LS +LCGF K LGV V D IA FS++E + EF+ R+
Sbjct: 100 PQSLPYFAAKFSLSVNDAAKRLCGFLKSLGVHYVFDTTIAADFSILESQREFVQRYQRRN 159
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+F S CPGW+ YAE+ + P+I KSPQQ+MGSL+K + A + + P
Sbjct: 160 QEEHALPMFASACPGWIRYAERVLTNLVTPHICTAKSPQQIMGSLVKGYFARQQNLSPEK 219
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
I+HV + PCYDKKLEA R DFY ++VDCV+T+ E+ ++ E ++++ +
Sbjct: 220 IFHVVVAPCYDKKLEALREDFYTALYNSQEVDCVLTSGEIVQIM--EQKNVSMKDVTEVA 277
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF- 355
+D + E ++ +G S GY ++ HA ++L + + +K L+N D +E T
Sbjct: 278 VDSLFGEIKEGDVVRHDGKRSDGYLEHIFKHAAKELFGMDVKEITYKALKNKDFQEVTLE 337
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G+ LRF A GFRNIQN++ KLK+ + Y F+E++ACP GCLNG Q + E K
Sbjct: 338 KDGETVLRFAAAYGFRNIQNMVLKLKKGKFLYHFVEVLACPGGCLNGKGQTQTEDGKPDK 397
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
++E + + P N ++ +Y+ WL G + K + L+T Y + + L++
Sbjct: 398 ALLSQMEDVYAAIPVRLPEANVYVQKMYQDWLEGMDSRKVQETLHTKYSAVNQTASNLDI 457
Query: 476 KW 477
KW
Sbjct: 458 KW 459
>gi|224074857|ref|XP_002193820.1| PREDICTED: nuclear prelamin A recognition factor isoform 1
[Taeniopygia guttata]
Length = 459
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 236/437 (54%), Gaps = 16/437 (3%)
Query: 52 IQETNGREEK-----LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHK 106
+ NG EEK L +I L+DCLAC C+T E + QQ+ +E +++ N +K
Sbjct: 28 LSSNNGSEEKNEFDTLANAKILLSDCLACDSCMTLEEGTRVFQQNQKEFFRIL---NLNK 84
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSL 166
K + +SL Q + AKF S + +LCGF K LGV V D IA FS+
Sbjct: 85 KCDTSKHKILAVSLCPQSLPYFAAKFNFSVNEAAKRLCGFLKSLGVHYVFDTTIAADFSI 144
Query: 167 VELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSL 221
+E + EF+ R+ P+F S CPGW+ YAE+ + +I KSPQQ+MGSL
Sbjct: 145 LESQREFVQRYQRRNQEEHALPMFASACPGWIRYAERVLTNLVTSHICTAKSPQQIMGSL 204
Query: 222 IKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA 281
+K + A + + P I+HV + PCYDKKLEA R DFY +VDCV+T+ E+ ++
Sbjct: 205 VKGYFARQQNLSPDKIFHVVVAPCYDKKLEALREDFYTALYNSAEVDCVLTSGEIVQIM- 263
Query: 282 NELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVE 341
E ++++ + +D +D ++ +G S GY ++ HA ++L + +
Sbjct: 264 -EQKNVSMKDVTEVAVDSLFDGLKEGDVVRHDGKRSDGYLEHIFKHAAKELFGVDVKEIT 322
Query: 342 FKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCL 400
+K L+N D RE T G+ LRF A GFRNIQN++ KLK+ + Y F+E++ACP GCL
Sbjct: 323 YKALKNKDFREVTLEKDGETVLRFAAAYGFRNIQNMVLKLKKGKFFYHFVEVLACPGGCL 382
Query: 401 NGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
NG Q + E K ++E + + P N ++ +Y+ WL G + K + L+
Sbjct: 383 NGKGQAQTEDGKPDKALLAQMEEVYTAIPVRLPEANLHVQRMYQDWLEGMDSRKVQDTLH 442
Query: 461 TSYHNIPKNNIALNVKW 477
T+Y + ++ +L++KW
Sbjct: 443 TTYSAVNQSTSSLDIKW 459
>gi|297702110|ref|XP_002828031.1| PREDICTED: nuclear prelamin A recognition factor isoform 1 [Pongo
abelii]
Length = 456
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 249/462 (53%), Gaps = 21/462 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K + A Q++G G KL +I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTDDQENVSADAPSPAQENG-----EKGEFHKLADAKIFLSDCLACDSCVTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 64 EGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA + F
Sbjct: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESF 240
Query: 258 YNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E+ +++ +L+ +D +D + + ++ +G
Sbjct: 241 PPALHGSRGADCVLTSGEIAQIMEQGDLSV------RDAAVDTLFGDLKEDKVTRHDGAS 294
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A GFRNIQN
Sbjct: 295 SDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVLLRFAAAYGFRNIQN 354
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
+I KLK+ + PY F+E++AC GCLNG Q + + K ++E I D+ P
Sbjct: 355 MILKLKKGKFPYHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPES 414
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 415 SAHVQELYQEWLEGINSPKAREVLHTTYQSQERGAHSLDIKW 456
>gi|355569052|gb|EHH25333.1| hypothetical protein EGK_09133 [Macaca mulatta]
Length = 429
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 238/429 (55%), Gaps = 16/429 (3%)
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
G KL I L+DCLAC C+T+ E V ++QQ+ ++ +V+ N +K K
Sbjct: 10 KGEFHKLADARIFLSDCLACDSCVTAEEGVQLSQQNAKDFFRVL---NLNKKCDTSKHKV 66
Query: 116 IVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
+V+S+ Q + AKF LS +LCGF K LGV V D IA FS++E + EF+
Sbjct: 67 LVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTRIAADFSILESQKEFVR 126
Query: 176 RFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
R+ P+ TS CPGWV YAE+ G I ++ KSPQQVMGSL+K + A +
Sbjct: 127 RYRQHSEEERTLPMLTSACPGWVRYAERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQ 186
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTL 289
+ P I+HV + PCYDKKLEA + F G R DCV+T+ E+ +++ +L+
Sbjct: 187 NLSPEKIFHVIVAPCYDKKLEALQEGFPPALHGSRGADCVLTSGEIAQIMDQGDLSV--- 243
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
KD +D + + ++ +G S G+ ++ HA ++L + V ++ LRN D
Sbjct: 244 ---KDAAVDTLFGDLKEDKVTRHDGASSDGHLAHIFRHAAKELFNEDVEEVTYRALRNKD 300
Query: 350 IREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
+E T G+V LRF A GFRNIQN+I KLK+ + PY F+E++AC GCLNG Q +
Sbjct: 301 FQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLKKGKFPYHFVEVLACAGGCLNGRGQAQT 360
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
+ K ++E I D+ P +A ++ LY+ WL G ++ K + +L+T+Y + +
Sbjct: 361 PDGHADKALLRQMEGIYADIPVRRPESSAHMQELYQEWLEGINSPKAREVLHTTYQSQER 420
Query: 469 NNIALNVKW 477
+L++KW
Sbjct: 421 GAHSLDIKW 429
>gi|403280732|ref|XP_003931865.1| PREDICTED: nuclear prelamin A recognition factor [Saimiri
boliviensis boliviensis]
Length = 471
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 253/470 (53%), Gaps = 26/470 (5%)
Query: 20 GPSQ-----ECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLA 74
GP Q EC K + A Q++G G KL +I L+DCLA
Sbjct: 16 GPGQSPLRNECSKKTKTDDQDDLSVDAPSPAQENG-----EKGEFHKLADAKIFLSDCLA 70
Query: 75 CSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFAL 134
C C+T+ E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF L
Sbjct: 71 CDSCVTAEEGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNL 127
Query: 135 SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSEC 189
S + +LCG K LGV V D IA FS++E + EF+ R+ P+ TS C
Sbjct: 128 SVTEASRRLCGSLKSLGVHFVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSAC 187
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGWV YAE+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKK
Sbjct: 188 PGWVRYAERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKK 247
Query: 250 LEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
LEA + + G R DCV+T+ E+ +++ +L+ KD +D + + +
Sbjct: 248 LEALQEGSLSALHGSRGTDCVLTSGEIAQIMEQGDLSV------KDAAIDTLFGDLREDK 301
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIA 367
+ +G GS G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A
Sbjct: 302 VTRHDGAGSDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKDGEVVLRFAAA 361
Query: 368 NGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCD 427
GFRNIQN+I KLK+ + PY F+E++AC GCLNG Q + + + K ++E I D
Sbjct: 362 CGFRNIQNMILKLKKGKFPYHFVEVLACAGGCLNGRGQAQTPEGHADKALLRQMEGIYAD 421
Query: 428 LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+ P +A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 422 IPVRRPESSAHVQELYQEWLEGINSPKAREVLHTTYQSQERGAHSLDIKW 471
>gi|449546957|gb|EMD37926.1| hypothetical protein CERSUDRAFT_123742 [Ceriporiopsis subvermispora
B]
Length = 581
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 190/465 (40%), Positives = 254/465 (54%), Gaps = 78/465 (16%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI------PIEKPSGPRTGAKIRIQDDGAY-----IQE 54
FSG L LTDL+DFI PSQ CIKP+ P+ P T +I++ G+Y +
Sbjct: 3 FSGALTLTDLNDFITPSQACIKPVEQSNPAPVHDPGAALT--QIQVDSTGSYYEVSAVGR 60
Query: 55 TNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTK 114
T+ +KL+ EISL DCLACSGCITSAESVLIT QSH EV+ + N A+++ +
Sbjct: 61 TDVDAKKLQTAEISLNDCLACSGCITSAESVLITLQSHTEVLNFLESNPILPAAAH---R 117
Query: 115 TIVLSLAIQPVLSLGAKFA------LSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLV 167
T VLS+A Q + SL A + + +V+A++ F R LG + V D A +L+
Sbjct: 118 TPVLSIAPQSLASLAAALSSSSARPVGPAEVLARVRAFAIRVLGFEHVFDTTFARHIALL 177
Query: 168 ELENEFLDRFLSGGG--------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMG 219
E EF +R SG G P+ S CPGWVCYAEK+H E +LP+IS KSPQQVMG
Sbjct: 178 EHAREFSER-RSGKGKEKGVAPLPMLASACPGWVCYAEKTHAE-MLPFISAAKSPQQVMG 235
Query: 220 SLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVL 279
+L+K + K G P IYHVT+MPCYDKKLEASR DF N+ RDVDCVIT EL++L
Sbjct: 236 TLVKEWMGAKWGRTPDQIYHVTVMPCYDKKLEASREDFCNDTYATRDVDCVITTGELDLL 295
Query: 280 LAN---ELATTTLQEEKDGILDWPWDEHNP---HRMLLVNGTGSGGYAHNVLSHAIRQLC 333
+ +L+ +E L P NP +L G+ SG Y H++++ +
Sbjct: 296 MREKGWDLSAPIPEE-----LSPPSPSLNPLAIPELLAHPGSSSGSYLHSLIAALVAS-- 348
Query: 334 PGESPVVE-FKPLRNPDIREATFT--CGDVTLRFCIANGFRNIQNLIQK----------- 379
++P+ + LRN D E T G R GFRN+QNL++K
Sbjct: 349 -SQTPLTHTVRTLRNSDYEEHTVMDESGATVFRGARCYGFRNLQNLVRKVGREAGLQVGR 407
Query: 380 --------LKRKRLP---------YDFIEIMACPSGCLNGGAQIR 407
L+R R YD++E+MACP GC+NGG Q+R
Sbjct: 408 GAAGRVGALRRARKAGPESEQEKGYDYVEVMACPGGCVNGGGQLR 452
>gi|431908622|gb|ELK12214.1| Nuclear prelamin A recognition factor [Pteropus alecto]
Length = 615
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 238/430 (55%), Gaps = 16/430 (3%)
Query: 55 TNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTK 114
+ G KL +I L+DCLAC C+T E V ++QQ+ ++ +V+ N +K K
Sbjct: 195 SKGEFHKLADAKIFLSDCLACDSCVTEEEGVQVSQQNAKDFFRVL---NLNKKCDTSKHK 251
Query: 115 TIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFL 174
+ +S+ Q + AKF+LS +LCGF K LGV V D +A S++E + EF+
Sbjct: 252 VLAVSVCPQSLPYFAAKFSLSVTDASRRLCGFLKSLGVHYVFDAAVAADLSILEGQKEFV 311
Query: 175 DRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK 229
RFL P+ TS CPGWV YAE+ G+ + P++ KSPQQ+MGSL+K + A +
Sbjct: 312 RRFLRHSEEEPALPMLTSACPGWVRYAERVLGQPLTPHLCTAKSPQQIMGSLVKDYFARR 371
Query: 230 LGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE-LEVLLANELATTT 288
+ P I+HV + PCYDKKLEA R DF YR DCV+T+ E ++++ ++L+
Sbjct: 372 QNLPPDKIFHVIVAPCYDKKLEALREDFSPALHSYRGADCVLTSGEVVQMMEQSDLSG-- 429
Query: 289 LQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNP 348
+D +D + + + +G S G+ ++ HA ++L + V ++ LRN
Sbjct: 430 ----RDAAVDTLFGDLREEELRRHDGASSDGHLAHIFRHAAKELFNEDVGEVTYRTLRNK 485
Query: 349 DIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
D +E T G+V LRF A GFRNIQN++ KLKR + PY F+E++AC GCLNG Q
Sbjct: 486 DFQEVTLERDGEVLLRFAAAYGFRNIQNVVLKLKRGKFPYHFVEVLACAGGCLNGRGQAL 545
Query: 408 NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
E + + ++E I + P +A+++ LY+ WLGG + + + L+ +Y
Sbjct: 546 AEDGRADRALLRQMEGIYTSIPVRAPEASASVQALYQEWLGGADSPRAQEALHMAYQGPG 605
Query: 468 KNNIALNVKW 477
+ + ++KW
Sbjct: 606 RPASSRDIKW 615
>gi|387017402|gb|AFJ50819.1| Nuclear prelamin A recognition factor-like [Crotalus adamanteus]
Length = 457
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 231/425 (54%), Gaps = 17/425 (4%)
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
KL +I L+DCLAC CIT+ E+V + QQ+ E +V+ N +K K +V+S+
Sbjct: 42 KLANAKIFLSDCLACDSCITAEEAVKVYQQNPNEFFRVL---NLNKKCDTSKHKVLVVSI 98
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
Q + AKF LS + +LCGF K LGV V D IA FSL+E + EF+ R+
Sbjct: 99 CPQSLPYFAAKFNLSVTEAARRLCGFLKSLGVHYVFDTTIAADFSLLESQKEFVQRYRQQ 158
Query: 181 GG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
P+ +S CPGW+ YAE+ ++P+I KSPQQ+MGSL+K + A + + P
Sbjct: 159 NQEEHVLPMLSSACPGWIQYAERVLPSMVIPHICTAKSPQQIMGSLVKNYFARQQNLSPD 218
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE-LEVLLANELATTTLQEEK- 293
I+H+ + PCYDKKLEA R DFY +DVDCV+T+ E +++ +++ + E
Sbjct: 219 KIFHIMVAPCYDKKLEALREDFYTHLYNSQDVDCVLTSGEVFQMMEQRKISLKEISEVSF 278
Query: 294 DGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
D +L +E N S GY ++ HA ++L E + +K L+N D +E
Sbjct: 279 DTLLGGIKEELNRR------DGRSDGYLEHIFKHAAKELFNTEVKELTYKILKNKDFQEV 332
Query: 354 TF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
T G+ LRF A GFRNIQN+I KLKR + Y F+E++ACP GCLNG Q + E
Sbjct: 333 TLEKDGETVLRFAAAYGFRNIQNMILKLKRGKCSYHFVEVLACPGGCLNGNGQAQTEDGK 392
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIA 472
K ++E + + P N ++ LY+ WL G + K + L+T Y+ +
Sbjct: 393 PDKALLKQMEDVYATVPVQIPETNGHVQKLYQEWLEGMESSKAQESLHTKYNMEKPTANS 452
Query: 473 LNVKW 477
++KW
Sbjct: 453 FDIKW 457
>gi|353234303|emb|CCA66329.1| related to NAR1-similarity to human nuclear prelamin A recognition
factor [Piriformospora indica DSM 11827]
Length = 565
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 187/481 (38%), Positives = 249/481 (51%), Gaps = 95/481 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEK-PSGPRTGA---KIRIQDDGAYIQ------ET 55
FSG + LTDL+DFI PSQ CIKP+ ++K P GA IR+ D GAY + T
Sbjct: 3 FSGAVTLTDLNDFITPSQACIKPVEVKKAPISDAKGAALTDIRVDDTGAYYEVEIGPKAT 62
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
+KL K EISL DCLACSGCITSAESVLIT QSHEEVM ++ N + + K
Sbjct: 63 GAPSQKLTKAEISLNDCLACSGCITSAESVLITMQSHEEVMSFLQSN---PPPGDPDHKI 119
Query: 116 IVLSLAIQPVLSL-------GAKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLV 167
VLS++ Q + SL + + S V+ + F LG + V D A +L
Sbjct: 120 PVLSISPQSLASLCSVSRAKSSSGSPSMRGVLDSVKAFASAELGFEHVFDTTFARHMALR 179
Query: 168 ELENEFLDRFLS------GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSL 221
E E+ +R + G P+ S CPGW+CYAEK+H E +LP+ISR KSPQQVMG+L
Sbjct: 180 EHILEYEERSAAFKNKEEGSLPMLASACPGWICYAEKAHAE-MLPFISRTKSPQQVMGTL 238
Query: 222 IKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA 281
+K L KL IYHVT+MPCYDKKLEASR DFYNE+ RDVDCV+T ELE L++
Sbjct: 239 VKEWLGRKL--QKRRIYHVTVMPCYDKKLEASRQDFYNEQYRTRDVDCVLTTGELENLMS 296
Query: 282 NELATTTLQE-----EKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAI-RQLCPG 335
+ + Q E GI D + + G+ SGG+ ++ H + R+ G
Sbjct: 297 IKRWNSDHQNHSPALETFGIPD----------LFMPPGSSSGGWLQVIIDHIVERERLQG 346
Query: 336 ESPVVEFKPLRNPDIREAT------FTCGDVTLRFCIANGFRNIQNLIQKL--------- 380
+ + K +R D + F +V R GFRN+QN+++K+
Sbjct: 347 RTCNIRTKTIRTSDYEDVVVEAVNQFNQTEVVFRGAKCYGFRNLQNVVRKVAKEAGVKGS 406
Query: 381 ------KRKRL----------------------------PYDFIEIMACPSGCLNGGAQI 406
R R+ PYD++E+MACP+GC+NGG Q
Sbjct: 407 GSAGRATRGRVTGVTAALRARRARKGEEALTQTELGDDRPYDYVEVMACPAGCVNGGGQA 466
Query: 407 R 407
R
Sbjct: 467 R 467
>gi|85861200|ref|NP_001034296.1| nuclear prelamin A recognition factor [Rattus norvegicus]
gi|123779921|sp|Q2YDU6.1|NARF_RAT RecName: Full=Nuclear prelamin A recognition factor; AltName:
Full=Iron-only hydrogenase-like protein 2; Short=IOP2
gi|82414782|gb|AAI10051.1| Nuclear prelamin A recognition factor [Rattus norvegicus]
Length = 456
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/431 (36%), Positives = 236/431 (54%), Gaps = 16/431 (3%)
Query: 54 ETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT 113
E G KL +I L+DCLAC C+T E V ++QQS ++ V+ N +K
Sbjct: 35 EEKGEFHKLADAKIFLSDCLACDSCVTVEEGVQLSQQSAKDFFHVL---NLNKRCDTSKH 91
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
K +V+S+ Q + AKF LS +LCGF K LGV V D IA FS++E + EF
Sbjct: 92 KVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEF 151
Query: 174 LDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
+ R+ P+ TS CPGWV YAE+ G I+PY+ KSPQQVMGSL+K + A
Sbjct: 152 VRRYHQHSEEQRELPMLTSACPGWVRYAERVLGRPIIPYLCTAKSPQQVMGSLVKDYFAR 211
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATT 287
+ + P I+H+ + PCYDKKLEA R G R DCV+T+ E+ +++ ++L+
Sbjct: 212 QQSLAPEKIFHIVVAPCYDKKLEALREGLSPTLNGARGTDCVLTSGEIAQIMEQSDLSV- 270
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
KD +D + + + +G S G+ +V HA ++L + ++ LRN
Sbjct: 271 -----KDIAVDTLFGDVKEMAVRRHDGVSSDGHLAHVFRHAAKELFGEHVEEITYRALRN 325
Query: 348 PDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI 406
D E T G+V LRF A GFRNIQN+I KLK+ + PY F+E++ACP GCLNG Q
Sbjct: 326 KDFHEVTLEKNGEVLLRFAAAYGFRNIQNMIMKLKKGKFPYHFVEVLACPRGCLNGRGQA 385
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
+ E + + ++E I + P + ++ LY+ WL G + K + +L+TSY ++
Sbjct: 386 QTEDGHTDRALLQQMEGIYSGIPVWPPESSTHVQELYQEWLEGTESPKVQEVLHTSYQSL 445
Query: 467 PKNNIALNVKW 477
+L++KW
Sbjct: 446 EPCTDSLDIKW 456
>gi|355784742|gb|EHH65593.1| hypothetical protein EGM_02377 [Macaca fascicularis]
Length = 437
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 238/429 (55%), Gaps = 16/429 (3%)
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
G KL I L+DCLAC C+T+ E V ++QQ+ ++ +V+ N +K K
Sbjct: 18 KGEFHKLADARIFLSDCLACDSCVTAEEGVQLSQQNAKDFFRVL---NLNKKCDTSKHKV 74
Query: 116 IVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
+V+S+ Q + AKF +S +LCGF K LGV V D IA FS++E + EF+
Sbjct: 75 LVVSVCPQSLPYFAAKFNVSVTDASRRLCGFLKSLGVHYVFDTRIAADFSILESQKEFVR 134
Query: 176 RFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
R+ P+ TS CPGWV YAE+ G I ++ KSPQQVMGSL+K + A +
Sbjct: 135 RYRQHSEEERTLPMLTSACPGWVRYAERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQ 194
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTL 289
+ P I+HV + PCYDKKLEA + F G R DCV+T+ E+ +++ +L+
Sbjct: 195 NLSPEKIFHVIVAPCYDKKLEALQEGFPPALHGSRGADCVLTSGEIAQIMDQGDLSV--- 251
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
KD +D + + ++ +G S G+ ++ HA ++L + V ++ LRN D
Sbjct: 252 ---KDAAVDTLFGDLKEDKVTRHDGASSDGHLAHIFRHAAKELFNEDVEEVTYRALRNKD 308
Query: 350 IREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
+E T G+V LRF A GFRNIQN+I KLK+ + PY F+E++AC GCLNG Q +
Sbjct: 309 FQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLKKGKFPYHFVEVLACAGGCLNGRGQAQT 368
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
+ K ++E I D+ P +A ++ LY+ WL G ++ K + +L+T+Y + +
Sbjct: 369 PDGHADKALLRQMEGIYADIPVRRPESSAHMQELYQEWLEGINSPKAREVLHTTYQSQER 428
Query: 469 NNIALNVKW 477
+L++KW
Sbjct: 429 GAHSLDIKW 437
>gi|392593884|gb|EIW83209.1| iron hydrogenase [Coniophora puteana RWD-64-598 SS2]
Length = 618
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 185/488 (37%), Positives = 252/488 (51%), Gaps = 93/488 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIP-------IEKPSGPRTGAKIRIQDDGAYIQETNGR 58
FSG L LTDL+DFI PSQ CIKP+ I +P T +IRI G+Y +
Sbjct: 3 FSGALTLTDLNDFITPSQACIKPVEQLNKPEEILEPGAAST--EIRIDSSGSYYEVAKNE 60
Query: 59 -----------EEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA 107
E KL++ +ISL DCLACSGCITSAESVLIT QSH EV+ + N +
Sbjct: 61 PSRPSTVPQNPENKLQQAQISLNDCLACSGCITSAESVLITLQSHTEVLAFLASNPPPAS 120
Query: 108 SSNENTKTIVLSLAIQPVLSL------GAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGI 160
+++ K VLS+A Q + SL G++ ++ Q++ ++ F + LG + V D
Sbjct: 121 AAH---KVPVLSIAPQTLASLAASVSSGSRAPVAPRQILRRVAAFAREALGFERVYDTTF 177
Query: 161 AHCFSLVELENEFLDR----------FLSGGGPLFTSECPGWVCYAEKSHGEFILPYISR 210
A +L E E+ +R SG P+ S CPGW+CYAEK+H E +LP+I+R
Sbjct: 178 ARHLALREHVQEYFERRDGAGQDGSGSGSGKLPMLASACPGWICYAEKAHAE-MLPFIAR 236
Query: 211 VKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCV 270
KSPQQVMG+L+K LA K G P +YHV +MPCYDKKLEASR DFY+E RDVDCV
Sbjct: 237 TKSPQQVMGTLVKAWLAPKWGKRPDEVYHVAVMPCYDKKLEASRQDFYSELYATRDVDCV 296
Query: 271 ITAVELEVLLAN---ELATTTLQEEKDGILDW---------PWDEHNPHRMLLVNGTGSG 318
IT ELE+L+ +L+ E++ L P D+ +L GT SG
Sbjct: 297 ITTGELELLMREKGWDLSVPVEHEDEPLPLSSSSSSPSLGTPDDDAALPELLTHPGTSSG 356
Query: 319 GYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE---ATFTCGDVTLRFCIANGFRNIQN 375
Y H ++ R + P E + K +R D E A G V R GFRN+QN
Sbjct: 357 SYLHALIDAVTRAVAP-EPVALSVKTVRTADYAEYALARRDTGTVVFRGATCYGFRNLQN 415
Query: 376 LIQKLKRK-----------RLP-------------------------YDFIEIMACPSGC 399
+++++ R+ R+ D++E+MACP GC
Sbjct: 416 VVRRVGREAGVRVGRGAAGRMAGARVRRRGGAAAATTGSGGGEEDRGLDYVEVMACPGGC 475
Query: 400 LNGGAQIR 407
+NGG Q+R
Sbjct: 476 VNGGGQLR 483
>gi|71995015|ref|NP_498092.4| Protein OXY-4 [Caenorhabditis elegans]
gi|75022888|sp|Q9N392.5|NARF_CAEEL RecName: Full=Probable cytosolic Fe-S cluster assembly factor oxy-4
gi|373219738|emb|CCD69851.1| Protein OXY-4 [Caenorhabditis elegans]
Length = 457
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 176/481 (36%), Positives = 269/481 (55%), Gaps = 28/481 (5%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M S FSGV++L+++ DFI P+ +CI P+ + +++ I+ +E++ EE
Sbjct: 1 MEDSGFSGVVRLSNVSDFIAPNLDCIIPLETRTVEKKKEESQVNIRTKKPKDKESSKTEE 60
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
K K V+ISL DCLACSGCITSAE+VL+ +QS V + I +N+K V+++
Sbjct: 61 K-KSVKISLADCLACSGCITSAETVLVEEQSFGRVYEGI-----------QNSKLSVVTV 108
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q + S+ K S +V + FF+RLGV V+D A F+ L E L S
Sbjct: 109 SPQAITSIAVKIGKSTNEVAKIIASFFRRLGVKYVIDSSFARKFAH-SLIYEELSTTPST 167
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
PL +S CPG+VCYAEKSHGE ++P IS+++SPQ + G++IK LA++ G+ P ++H
Sbjct: 168 SRPLLSSACPGFVCYAEKSHGELLIPKISKIRSPQAISGAIIKGFLAKREGLSPCDVFHA 227
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL--EVL-LANELATTTLQEEKDGIL 297
+MPC+DKKLEASR F + R+ DCVI+ EL E++ L N+ A E +
Sbjct: 228 AVMPCFDKKLEASREQFKVDGTDVRETDCVISTAELLEEIIKLENDEAGDV--ENRSEEE 285
Query: 298 DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC 357
W + ++ +G SGGYA ++ + L G V K +N
Sbjct: 286 QW-LSALSKGSVIGDDGGASGGYADRIVRDFV--LENGGGIVKTSKLNKNMFSTTVESEA 342
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
G++ LR GFRN+QNL++K+K K+ D++EIMACP GC NGG QIR E + +E
Sbjct: 343 GEILLRVAKVYGFRNVQNLVRKMKTKKEKTDYVEIMACPGGCANGGGQIRYETMDEREEK 402
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKG-KHMLNTSYHNIPKNNIALNVK 476
+++E + DL + + E T + + W + DK +++L T Y + + N+A +K
Sbjct: 403 LIKVEALYEDLPRQDDEE--TWIKVREEW---EKLDKNYRNLLFTDYRPV-ETNVAQVLK 456
Query: 477 W 477
W
Sbjct: 457 W 457
>gi|116007462|ref|NP_001036427.1| CG17683, isoform E [Drosophila melanogaster]
gi|51951086|gb|EAL24588.1| CG17683, isoform E [Drosophila melanogaster]
Length = 296
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/299 (48%), Positives = 199/299 (66%), Gaps = 8/299 (2%)
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ +S CPGWVCYAEK+HG F+LPY+S +SPQQ+MG L+K LA+K+ V S IYHVT+M
Sbjct: 1 MLSSSCPGWVCYAEKTHGNFLLPYVSTTRSPQQIMGVLVKQILADKMNVPASRIYHVTVM 60
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PCYDKKLEASR DF+++ RDVDCVIT+VE+E LL+ A L + LDWPW
Sbjct: 61 PCYDKKLEASREDFFSKANNSRDVDCVITSVEVEQLLSE--AQQPLSQYDLLDLDWPWSN 118
Query: 304 HNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPDIREATF-TCGDV 360
P M+ + T SGGYA ++ +A + + + +EFK L+N D RE G
Sbjct: 119 VRPEFMVWAHEKTLSGGYAEHIFKYAAKHIFNEDLKTELEFKQLKNRDFREIILKQNGKT 178
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
L+F IANGFRNIQNL+QKLKR+++ Y F+E+MACPSGC+NGGAQIR +E
Sbjct: 179 VLKFAIANGFRNIQNLVQKLKREKVSNYHFVEVMACPSGCINGGAQIRPTTGQHVRELTR 238
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN-NIALNVKW 477
+LE + +L +SEP EN+ +H+Y +L G +DK +L+T YH++ +I+LN+ W
Sbjct: 239 KLEELYQNLPRSEP-ENSLTKHIYNDFLDGFQSDKSYDVLHTRYHDVVSELSISLNINW 296
>gi|392569939|gb|EIW63112.1| iron hydrogenase [Trametes versicolor FP-101664 SS1]
Length = 620
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 258/503 (51%), Gaps = 83/503 (16%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-PIEKPSGPRTGA---KIRIQDDGAY---------- 51
FSG L LTDL+DFI PS CIKP+ KP GA +I++ G Y
Sbjct: 3 FSGALTLTDLNDFITPSLACIKPVEQTNKPEPQDAGAAATEIQVDSSGLYYEVSATSKQT 62
Query: 52 -IQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN 110
Q ++KL EISL DCLACSGCITSAESVLIT QSH EV+ + ENN S++
Sbjct: 63 ATQTGKDTKQKLATAEISLNDCLACSGCITSAESVLITMQSHTEVLNFL-ENN--PPSTS 119
Query: 111 ENTKTIVLSLAIQ------PVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHC 163
++ K V+S+A Q +S + LS QV+ ++ F + LG V D A
Sbjct: 120 QDHKVPVISIAPQCLASLAASISSTSSQTLSLLQVLRRVTAFCQSALGFAHVYDTTFARH 179
Query: 164 FSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLI 222
SL+E EF +R G P+ S CPGWVCYAEK+H E +LPYIS+ KSPQQVMG+L+
Sbjct: 180 ISLLEHAKEFAERKKGDGKLPMLASACPGWVCYAEKTHSE-MLPYISQTKSPQQVMGTLV 238
Query: 223 KTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN 282
K L K G P IYHVT+MPCYDKKLEASR DFY+E RDVDCVIT EL++L+ +
Sbjct: 239 KEWLGAKWGKQPDQIYHVTVMPCYDKKLEASRQDFYSEVYSTRDVDCVITTGELQLLMQD 298
Query: 283 ELATTTLQEEKDGILDWP--------------WDEHNPHRMLLVNGTGSGGYAHNVLSHA 328
+ ++ + + P +H +L+ GT SG Y H+++S
Sbjct: 299 KGWELSMPVPDENLPPRPHPTAIDAAMNATNTGADHGLPELLMHPGTSSGSYMHSLISTL 358
Query: 329 IRQLCPGESPVVEFKPLRNPDIREATFT---CGDVTLRFCIANGFRNIQNLIQKLKRK-- 383
+ K +R D E T T G V R GFRN+QN+++K+ R+
Sbjct: 359 TSTAADPSVLELSTKTVRTADYEEYTLTDRSTGAVVFRGAKCYGFRNLQNVVRKVGREAG 418
Query: 384 ---------RLP--------------------------YDFIEIMACPSGCLNGGAQIRN 408
R+ YD++E+MACP GC+NGG Q+R
Sbjct: 419 VQVGRGAAGRMAGLRARGRAVRRGGTAGTEGAPQEERGYDYVEVMACPGGCVNGGGQLRP 478
Query: 409 EKVASPKETALELETILCDLAKS 431
AS +T + E + D A S
Sbjct: 479 VHQAS--KTTTDAEGLPRDWAAS 499
>gi|169847095|ref|XP_001830259.1| nuclear prelamin A recognition factor-like protein [Coprinopsis
cinerea okayama7#130]
gi|116508511|gb|EAU91406.1| nuclear prelamin A recognition factor-like protein [Coprinopsis
cinerea okayama7#130]
Length = 748
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 187/493 (37%), Positives = 250/493 (50%), Gaps = 100/493 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSG--PRTGAK--IRIQDDGAY---------- 51
FSG L LTDL+DFI P+Q CIKP+ K + P+TGAK I I G+Y
Sbjct: 3 FSGTLTLTDLNDFISPAQACIKPVEEVKKTDDQPKTGAKTEIVIDSTGSYYEVSNEPSYG 62
Query: 52 ---IQETNGRE----EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNA 104
I + N R +KL++ +I+L DCLACSGCITSAESVLIT QSH EV I N
Sbjct: 63 SVDISKGNTRSSSSGQKLEQAQINLNDCLACSGCITSAESVLITLQSHTEVFNFIESN-- 120
Query: 105 HKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKR--------LGVDLVL 156
K + ++ K +VLS+A Q + SL A Q + +R LG V
Sbjct: 121 -KDACSDTKKLLVLSIAPQSLASLAASLTARFPQALTTPLQVLRRVRAFCKETLGFSEVF 179
Query: 157 DVGIAHCFSLVELENEFLDRFL--SGGG-------PLFTSECPGWVCYAEKSHGEFILPY 207
D A SL E EF +R S GG P+ S CPGW+CYAEK+H +LP+
Sbjct: 180 DTTFARHLSLREHVLEFEERKKKDSQGGQEAEGQLPMLASACPGWICYAEKAHA-GMLPF 238
Query: 208 ISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDV 267
ISR KSPQQVMG+L+K +A+K P IYHV++MPCYDKKLEASR DFYN+ RDV
Sbjct: 239 ISRTKSPQQVMGTLVKEWMAQKWNKKPDGIYHVSVMPCYDKKLEASRQDFYNDVYSTRDV 298
Query: 268 DCVITAVELEVLLANE--LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVL 325
DCVIT ELE+++ + + ++ E D P D + ++ G+ SG Y +++
Sbjct: 299 DCVITTGELELMMKEKDWDISKSVPHELDEQQTSPSDAIHLPELIQHPGSSSGSYLQSII 358
Query: 326 SHAIRQLCPGESPV---VEFKPLRNPDIREATF---TCGDVTLRFCIANGFRNIQNLIQK 379
H SPV + K +RN D E T G + + GFRN+QN+++K
Sbjct: 359 DHVTET-----SPVTLALNTKLMRNADYEEFTLAEEASGKIVFKGAKCYGFRNLQNIVRK 413
Query: 380 LKRKR---------------------------------------------LPYDFIEIMA 394
+ R + YD++E+MA
Sbjct: 414 VGRDKGVRLGGGAAGKLGGKATGGVGRRIARRKGADAAAGGGSGEASAANRQYDYVEVMA 473
Query: 395 CPSGCLNGGAQIR 407
CPSGC+NGG Q++
Sbjct: 474 CPSGCVNGGGQLK 486
>gi|6912524|ref|NP_036468.1| nuclear prelamin A recognition factor isoform a [Homo sapiens]
gi|74735021|sp|Q9UHQ1.1|NARF_HUMAN RecName: Full=Nuclear prelamin A recognition factor; AltName:
Full=Iron-only hydrogenase-like protein 2; Short=IOP2
gi|5777952|gb|AAD51446.1|AF128406_1 nuclear prelamin A recognition factor [Homo sapiens]
gi|7021904|dbj|BAA91432.1| unnamed protein product [Homo sapiens]
gi|119610204|gb|EAW89798.1| hCG30379, isoform CRA_h [Homo sapiens]
Length = 456
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 248/462 (53%), Gaps = 21/462 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K + A Q++G G KL +I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTDDQENVSADAPSPAQENG-----EKGEFHKLADAKIFLSDCLACDSCMTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 64 EGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA +
Sbjct: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240
Query: 258 YNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E+ +++ +L+ +D +D + + ++ +G
Sbjct: 241 PPALHGSRGADCVLTSGEIAQIMEQGDLSV------RDAAVDTLFGDLKEDKVTRHDGAS 294
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A GFRNIQN
Sbjct: 295 SDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQN 354
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
+I KLK+ + P+ F+E++AC GCLNG Q + + K ++E I D+ P
Sbjct: 355 MILKLKKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPES 414
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 415 SAHVQELYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW 456
>gi|410337649|gb|JAA37771.1| nuclear prelamin A recognition factor [Pan troglodytes]
Length = 456
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 248/462 (53%), Gaps = 21/462 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K + A Q++G G KL +I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTDDQENVSADAPSPAQENG-----EKGEFHKLADAKIFLSDCLACDSCVTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 64 EGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA +
Sbjct: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240
Query: 258 YNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E+ +++ +L+ +D +D + + ++ +G
Sbjct: 241 PPALHGSRGADCVLTSGEIAQIMEQGDLSV------RDAAVDTLFGDLKEDKVTRHDGAS 294
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A GFRNIQN
Sbjct: 295 SDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQN 354
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
+I KLK+ + P+ F+E++AC GCLNG Q + + K ++E I D+ P
Sbjct: 355 MILKLKKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPES 414
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 415 SAHVQELYQEWLEGVNSPKAREVLHTTYQSQERGAHSLDIKW 456
>gi|395825752|ref|XP_003786085.1| PREDICTED: nuclear prelamin A recognition factor isoform 1
[Otolemur garnettii]
Length = 456
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 245/461 (53%), Gaps = 19/461 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+ECIK + A I +D +ET G KL +I L+DCLAC CIT+
Sbjct: 9 KECIKKTKTDDQENVSEEAPSPIPED----RET-GEFHKLADAKIFLSDCLACDSCITAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 64 EGVQLSQQNAKDFFHVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYHQHSEKERVLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G + P++ KSPQQVMGSL+K + A + + P I+HV + PCYD+KLEA R F
Sbjct: 181 RVLGRPVTPHLCTAKSPQQVMGSLVKDYFARQQSLSPEKIFHVIVAPCYDRKLEALREGF 240
Query: 258 YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGS 317
+ DCV+T+ E+ ++A + +D +D + + ++ +G S
Sbjct: 241 SSTSRSSLGADCVLTSGEIAQIMAQSDLSV-----QDATVDTLFGDSKEEMVMRHDGASS 295
Query: 318 GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNL 376
G+ +V +A ++L + V ++ LRN D +E T G+V LRF A GFRNIQN+
Sbjct: 296 DGHLVHVFRYAAKELFNEDVEEVTYRALRNKDFQEVTLEKDGEVLLRFAAAYGFRNIQNM 355
Query: 377 IQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPREN 436
I KLK+ PY F+E++ACP GCLNG Q + K ++E I D+ P +
Sbjct: 356 ILKLKKGTFPYHFVEVLACPGGCLNGRGQAETQDGHVDKALLRQMEGIYSDIPVRPPETS 415
Query: 437 ATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
A ++ LY+ WL G + K + L+T++ + +L+++W
Sbjct: 416 ANVQELYQQWLDGVDSPKAQETLHTTFQSPEHCAHSLDIRW 456
>gi|296203462|ref|XP_002748914.1| PREDICTED: nuclear prelamin A recognition factor [Callithrix
jacchus]
Length = 635
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 240/433 (55%), Gaps = 16/433 (3%)
Query: 52 IQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNE 111
+ G KL +I L+DCLAC C+T+ E V ++QQ+ ++ +V+ N +K
Sbjct: 212 VSRQKGEFHKLADAKIFLSDCLACDSCVTAEEGVQLSQQNAKDFFRVL---NLNKKCDTS 268
Query: 112 NTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
K +V+S+ Q + AKF LS + +LCGF K LGV V D IA FS++E +
Sbjct: 269 KHKVLVVSVCPQSLPYFAAKFNLSVTEASRRLCGFLKSLGVHYVFDTTIATDFSILESQK 328
Query: 172 EFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHL 226
EF+ R+ P+ TS CPGWV YAE+ G I ++ KSPQQ+MGSL+K +
Sbjct: 329 EFVRRYRQHSEEERTLPMLTSACPGWVRYAERVLGRPITAHLCTAKSPQQIMGSLVKDYF 388
Query: 227 AEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELA 285
A + + P I+H+ + PCYDKKLEA + G R DCV+T+ E+ +++ +L+
Sbjct: 389 ARQQNLSPEKIFHIIVAPCYDKKLEALQEGALPALHGSRGTDCVLTSGEIAQIMEQGDLS 448
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPL 345
KD +D + + ++ +G S G+ ++ HA ++L + V ++ L
Sbjct: 449 V------KDATIDTLFGDLKEDKVTRHDGASSDGHLAHIFRHAAKELFNEDVEEVTYRAL 502
Query: 346 RNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
RN D +E T G+V LRF A GFRNIQN+I KLK+ + PY F+E++AC GCLNG
Sbjct: 503 RNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLKKGKFPYHFVEVLACAGGCLNGRG 562
Query: 405 QIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
Q + + + K ++E I D+ P +A ++ LY+ WL G ++ K + +L+T+Y
Sbjct: 563 QAQTPEGQADKALLRQMEGIYADIPVRRPGSSAHMQELYQEWLEGINSPKAQEVLHTTYQ 622
Query: 465 NIPKNNIALNVKW 477
+ +L++KW
Sbjct: 623 SQEHRAHSLDIKW 635
>gi|397475147|ref|XP_003809009.1| PREDICTED: nuclear prelamin A recognition factor [Pan paniscus]
gi|410212944|gb|JAA03691.1| nuclear prelamin A recognition factor [Pan troglodytes]
gi|410262860|gb|JAA19396.1| nuclear prelamin A recognition factor [Pan troglodytes]
gi|410290076|gb|JAA23638.1| nuclear prelamin A recognition factor [Pan troglodytes]
Length = 456
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 248/462 (53%), Gaps = 21/462 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K + A Q++G G KL +I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTDDQENVSADAPSPAQENG-----EKGEFHKLADAKIFLSDCLACDSCVTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 64 EGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA +
Sbjct: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240
Query: 258 YNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E+ +++ +L+ +D +D + + ++ +G
Sbjct: 241 PPALHGSRGADCVLTSGEIAQIMEQGDLSV------RDAAVDTLFGDLKEDKVTRHDGAS 294
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A GFRNIQN
Sbjct: 295 SDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQN 354
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
+I KLK+ + P+ F+E++AC GCLNG Q + + K ++E I D+ P
Sbjct: 355 MILKLKKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPES 414
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 415 SAHVQELYQEWLEGINSPKAREVLHTTYQSQERGAHSLDIKW 456
>gi|426346275|ref|XP_004040805.1| PREDICTED: nuclear prelamin A recognition factor isoform 1 [Gorilla
gorilla gorilla]
Length = 456
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 247/462 (53%), Gaps = 21/462 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K E A Q++G G KL +I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTEDQENVSADAPSLAQENG-----EKGEFHKLADAKIFLSDCLACDSCVTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 64 EGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA +
Sbjct: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240
Query: 258 YNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E+ +++ +L+ +D +D + + ++ +G
Sbjct: 241 PPALHGSRGADCVLTSGEIAQIMEQGDLSV------RDAAVDTLFGDLKEDKVTRHDGAS 294
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A GFRNIQN
Sbjct: 295 SDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQN 354
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
+I KLK+ + P+ F+E++AC GCLNG Q + + K ++E I D+ P
Sbjct: 355 MILKLKKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPES 414
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+A ++ LY+ WL G ++ K + +L+T+Y + +L++KW
Sbjct: 415 SAHVQELYQEWLEGINSPKAREVLHTTYQSQEHGAHSLDIKW 456
>gi|354469091|ref|XP_003496964.1| PREDICTED: nuclear prelamin A recognition factor-like isoform 1
[Cricetulus griseus]
Length = 457
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/438 (36%), Positives = 237/438 (54%), Gaps = 27/438 (6%)
Query: 53 QETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN 112
+E G KL +I L+DCLAC C+T E V ++QQS ++ V+ N +K
Sbjct: 34 KEEKGEFHKLADAKIFLSDCLACDSCVTVEEGVQLSQQSAKDFFHVL---NLNKKCDTSK 90
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENE 172
+ +V+S+ Q + AKF LS +LCGF K LGV V D IA FS++E + E
Sbjct: 91 HRVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKE 150
Query: 173 FLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA 227
F+ R+ P+ TS CPGWV YAE+ G ++P++ KSPQQ+MGSL+K + A
Sbjct: 151 FVRRYHRHSEEQRELPMLTSACPGWVRYAERVLGRPVIPHLCTAKSPQQIMGSLVKDYFA 210
Query: 228 EKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELAT 286
+ + P I+HV + PCYDKKLEA R G R DCV+T+ E+ +++ ++L+
Sbjct: 211 RQQNLSPEKIFHVVVAPCYDKKLEALREGLSTTLNGARGTDCVLTSGEIAQIMEQSDLSV 270
Query: 287 ------TTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVV 340
T + K+ + W D G S G+ +V HA ++L +
Sbjct: 271 KDTAVDTLFGDVKEEVAVWRHD-----------GVSSDGHLAHVFRHAAKELFGEHIEEI 319
Query: 341 EFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
++ LRN D E T G+V LRF A GFRNIQN+I KLK+ + PY F+E++ACP GC
Sbjct: 320 NYRALRNKDFHEVTLEKNGEVLLRFAAAYGFRNIQNMILKLKKGKFPYHFVEVLACPRGC 379
Query: 400 LNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHML 459
LNG Q + E + + ++E I + P +A +E LY+ WL G + K + +L
Sbjct: 380 LNGRGQAQTEDGHTDRALLQQMEGIYSGIPVRPPESSAHVEELYQQWLEGTESPKVQEVL 439
Query: 460 NTSYHNIPKNNIALNVKW 477
+T+Y ++ +L++KW
Sbjct: 440 HTTYQSLEPCTDSLDMKW 457
>gi|440895967|gb|ELR48019.1| Nuclear prelamin A recognition factor [Bos grunniens mutus]
Length = 454
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 234/423 (55%), Gaps = 14/423 (3%)
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
KL +I L+DCLAC C+++ E + ++QQ+ ++ +V+ N +K K + +SL
Sbjct: 40 KLADAKIFLSDCLACDSCVSAEEGIQVSQQNAKDFFQVL---NLNKKCDTSEHKVLAVSL 96
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
Q + AKF+LS +LCGF K LGV V D IA FS++E + EF+ RF
Sbjct: 97 CPQSLPYFAAKFSLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRFRQH 156
Query: 181 GG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
P+ TS CPGWV YAE+ G + P++ KSPQQ+MGSL+K + A + + P
Sbjct: 157 NEEEPALPMLTSACPGWVRYAERVLGHPVTPHLCTAKSPQQIMGSLVKDYFARRQNLSPD 216
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
I+HV + PCYDKKLEA + D G R DCV+T+ E+ ++ E + +++E
Sbjct: 217 KIFHVIVAPCYDKKLEALQEDVLTASRGSRGTDCVLTSGEVAQMM--EQSDVSVRE---A 271
Query: 296 ILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
LD + + + +G GS GY ++ HA ++L + V ++ LRN D +E T
Sbjct: 272 ALDTLFGDVKEEELRRHDGAGSDGYLAHIFRHAAKELFNEDVGEVTYRALRNKDFQEVTL 331
Query: 356 -TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
G+V LRF A GFRNIQN++ KLK+ + PY F+E++AC GCLNG Q + +
Sbjct: 332 EKSGEVLLRFAAAYGFRNIQNVVLKLKKGKFPYHFVEVLACAGGCLNGRGQAQTADGRTD 391
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
K +++ I D+ P + ++ LY+ WL G + + + L+T+Y + + +
Sbjct: 392 KALLQKMKGIYADIPVQLPEASTHVQELYQEWLDGTDSPRVQEALHTAYQGPGQPADSRD 451
Query: 475 VKW 477
+KW
Sbjct: 452 IKW 454
>gi|109119241|ref|XP_001113522.1| PREDICTED: nuclear prelamin A recognition factor isoform 3 [Macaca
mulatta]
Length = 457
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/462 (35%), Positives = 244/462 (52%), Gaps = 20/462 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K + A Q++G G KL I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTDDQENVSADAPSPAQENG-----EKGEFHKLADARIFLSDCLACDSCVTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 64 EGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTRIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA + F
Sbjct: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQEGF 240
Query: 258 YNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E+ +++ +L+ D D+ H +G
Sbjct: 241 PPALHGSRGADCVLTSGEIAQIMDQGDLSVKDAASTLCKFGDLKEDKVTRH-----DGAS 295
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A GFRNIQN
Sbjct: 296 SDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQN 355
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
+I KLK+ + PY F+E++AC GCLNG Q + + K ++E I D+ P
Sbjct: 356 MILKLKKGKFPYHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPES 415
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 416 SAHMQELYQEWLEGINSPKAREVLHTTYQSQERGAHSLDIKW 457
>gi|148236349|ref|NP_001085771.1| nuclear prelamin A recognition factor [Xenopus laevis]
gi|82184347|sp|Q6GP25.1|NARF_XENLA RecName: Full=Nuclear prelamin A recognition factor
gi|49118837|gb|AAH73323.1| MGC80731 protein [Xenopus laevis]
Length = 456
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/426 (36%), Positives = 233/426 (54%), Gaps = 18/426 (4%)
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
+L + +I L+DCLAC C+TS E I Q+ +E+ KV+ N +S + K +V S+
Sbjct: 40 QLAEAKIFLSDCLACGNCVTSEEGAKIFAQNQKELFKVLNRNKKCDSSLH---KLVVASI 96
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q V KF LS + KLCGF K LGV VLD IA FS++E + +F+ RF
Sbjct: 97 SPQSVPYFAVKFHLSVCEASKKLCGFLKSLGVHHVLDTTIAADFSILETQKDFIQRFRRQ 156
Query: 181 -----GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
P+F S CPGWV YAE+ G+ + P+I KSPQQ+MGSL+K + A V P
Sbjct: 157 TQDEHAFPMFASACPGWVQYAERVLGDSVTPHICTAKSPQQIMGSLVKGYFASSKNVSPD 216
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
I+H+ + PCYD+KLEA R D+Y E RDVDCV+T+ EV+ E +++E
Sbjct: 217 KIFHLMVAPCYDRKLEALREDYYTELYNCRDVDCVLTSG--EVMQIMEQQNISVKE---- 270
Query: 296 ILDWPWDE---HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE 352
++++P + + GT S GY +V HA ++L + + +K L+N D E
Sbjct: 271 VMEFPLENLFGETSCVFVRHEGTSSDGYLAHVFRHAAKELFDMDVQEITYKALKNKDFLE 330
Query: 353 ATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
+ G+ LRF A GFRNIQN++ KL++ + Y F+E++ACP GCLNG Q +
Sbjct: 331 VSLEKDGETVLRFAAAYGFRNIQNMVLKLRKGKFHYHFVEVLACPGGCLNGKGQAQTMDG 390
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
+ E+E + + P N ++ LY+ WL G + K K L+T ++
Sbjct: 391 KVERALLHEMEEVYTRVPIQNPESNPHIQALYEDWLQGAESQKTKQTLHTKIVASAQSAA 450
Query: 472 ALNVKW 477
L++KW
Sbjct: 451 RLDMKW 456
>gi|119610203|gb|EAW89797.1| hCG30379, isoform CRA_g [Homo sapiens]
Length = 455
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 248/462 (53%), Gaps = 22/462 (4%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K + A Q++G + KL +I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTDDQENVSADAPSPAQENG------EAKFHKLADAKIFLSDCLACDSCMTAE 62
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 63 EGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 119
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 120 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 179
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA +
Sbjct: 180 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 239
Query: 258 YNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E+ +++ +L+ +D +D + + ++ +G
Sbjct: 240 PPALHGSRGADCVLTSGEIAQIMEQGDLSV------RDAAVDTLFGDLKEDKVTRHDGAS 293
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A GFRNIQN
Sbjct: 294 SDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQN 353
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
+I KLK+ + P+ F+E++AC GCLNG Q + + K ++E I D+ P
Sbjct: 354 MILKLKKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPES 413
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 414 SAHVQELYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW 455
>gi|426238301|ref|XP_004013093.1| PREDICTED: nuclear prelamin A recognition factor isoform 1 [Ovis
aries]
Length = 456
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 234/428 (54%), Gaps = 14/428 (3%)
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
G KL +I L+DCLAC C+++ E + ++QQ+ ++ +V+ N +K +
Sbjct: 37 KGEFHKLADAKIFLSDCLACDSCVSAEEGIQVSQQNAKDFFQVL---NLNKKCDTSKHRV 93
Query: 116 IVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
+ +S+ Q + AKF+LS +LCGF K LGV V D IA FS++E + EF+
Sbjct: 94 LAVSVCPQSLPYFAAKFSLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEFVR 153
Query: 176 RFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
RF P+ TS CPGWV YAE+ G + P++ KSPQQ+MGSL+K + A +
Sbjct: 154 RFRQHNEEEPALPMLTSACPGWVRYAERVLGHPVTPHLCTAKSPQQIMGSLVKDYFARRQ 213
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQ 290
+ P I+HV + PCYDKKLEA + D G R DCV+T+ E+ ++ E + +++
Sbjct: 214 NLSPDKIFHVIVAPCYDKKLEALQEDVLTASRGSRGTDCVLTSGEIAQMM--EQSDVSVR 271
Query: 291 EEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI 350
E LD + + +G GS GY ++ HA ++L + V ++ LRN D
Sbjct: 272 E---AALDTLFGNVKEEELRRHDGAGSDGYLAHIFRHAAKELFNEDVGEVTYRALRNKDF 328
Query: 351 REATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
+E T G+V LRF A GFRNIQN++ KLK+ + PY F+E++AC GCLNG Q +
Sbjct: 329 QEVTLEKSGEVLLRFAAAYGFRNIQNVVLKLKKGKFPYHFVEVLACAGGCLNGRGQAQTA 388
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
+ K +++ I D+ P + ++ LY+ WL G + + + L+T+Y +
Sbjct: 389 DGRTDKALLQKMKGIYADIPVQLPEASTHVQELYQEWLDGTDSPRVQEALHTAYQGPGRP 448
Query: 470 NIALNVKW 477
+ ++KW
Sbjct: 449 ADSRDIKW 456
>gi|432119127|gb|ELK38347.1| Nuclear prelamin A recognition factor [Myotis davidii]
Length = 433
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 238/433 (54%), Gaps = 16/433 (3%)
Query: 51 YIQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN 110
Y+Q+ G KL +I L+DCLAC C+T+ E V ++QQ+ ++ +V+ N AS +
Sbjct: 11 YLQK--GEFHKLADAKIFLSDCLACDSCVTAEEGVQVSQQNAKDFFRVLNLNKKCDASQH 68
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELE 170
K + +S+ Q + AKF+LS +LCGF K LGV V D+ IA FS++E +
Sbjct: 69 ---KVLAVSVCPQSLPYFAAKFSLSVTDASRRLCGFLKSLGVHYVFDMTIAADFSILESQ 125
Query: 171 NEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
EF+ R+ P+ TS CPGWV YAE+ G I P++ KSPQQ+MGSL+K +
Sbjct: 126 KEFVRRYRQHREEEPRLPMLTSACPGWVRYAERVLGHPITPHLCTAKSPQQIMGSLVKDY 185
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA 285
A + + P ++HV + PCYDKKLEA R D R DCV+T+ E+ L+
Sbjct: 186 FARRQNLSPDKVFHVIVAPCYDKKLEALREDVPTPLQSSRGADCVLTSGEIVQLMEQSDL 245
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPL 345
+ D ++D + + + G S GY ++ HA ++L + + ++ L
Sbjct: 246 SP-----DDALVDTLFGDVKEEEVRRHEGASSDGYLAHIFRHAAKELFNEDVGELTYRSL 300
Query: 346 RNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
RN D +E T G+V LRF A GFRNIQN++ KLKR + PY F+E++AC GCL+G
Sbjct: 301 RNKDFQEVTLERDGEVLLRFAAAYGFRNIQNVVLKLKRGKFPYHFVEVLACAGGCLSGRG 360
Query: 405 QIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
Q + E + + ++E I + P +A ++ LY+ WLGG + + + L+T+Y
Sbjct: 361 QAQAEDGRADRALLRQMEGIYAAIPVRPPETSAHVQELYQEWLGGADSPRAQAALHTAYQ 420
Query: 465 NIPKNNIALNVKW 477
++ + ++KW
Sbjct: 421 GPGQSASSRDIKW 433
>gi|345326494|ref|XP_001513248.2| PREDICTED: nuclear prelamin A recognition factor [Ornithorhynchus
anatinus]
Length = 457
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 240/462 (51%), Gaps = 19/462 (4%)
Query: 22 SQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITS 81
SQ C++ I K SG ++ + Q++ KL +I L+DCLAC C+T
Sbjct: 9 SQTCLRGISPAKKSG------CLFKESSSLAQKSEF--HKLADAKIFLSDCLACDSCVTE 60
Query: 82 AESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVA 141
E + QQ+ +E +V+ N +K K + S+ Q + AKF L
Sbjct: 61 EEGARVFQQNQKEFFRVL---NLNKKCDTSKHKVLAASICPQSLPYFAAKFNLCVTDTSR 117
Query: 142 KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-----SGGGPLFTSECPGWVCYA 196
+LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YA
Sbjct: 118 RLCGFLKSLGVHYVFDTTIAADFSILESQKEFVQRYRRREQEEHALPMLTSACPGWVRYA 177
Query: 197 EKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD 256
E+ + +I KSPQQ+MGSL+K + A + + P I+H+ + PCYDKKLEA R D
Sbjct: 178 ERVLANPVTLHICTAKSPQQIMGSLVKDYFARQKNLSPDKIFHIIVAPCYDKKLEALRED 237
Query: 257 FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
FY +DVDCV+T+ E+ +L E + +L E ++ +D + ++ +GT
Sbjct: 238 FYTSLYDSQDVDCVLTSGEIVQIL--EQSGLSLNELEEASVDTLFGATTEGEVVRHDGTR 295
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S GY +V HA ++L + + ++ L+N D +E T G+V LRF A GFRNIQN
Sbjct: 296 SDGYLEHVFKHAAKELFDMDVQEITYRTLKNKDFQEVTLERDGEVLLRFAAACGFRNIQN 355
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
L+ K+KR R PY F+E++ACP GCLNG Q+ LE + P
Sbjct: 356 LVLKMKRGRFPYHFVEVLACPGGCLNGKGQMEAGSGKPDGALLRRLEEAYAGIPVRLPEA 415
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
NA ++ LY+ WL G + K + L+TSY ++KW
Sbjct: 416 NAHVQRLYRDWLQGTDSPKVQAALHTSYGAAEPPAPGPHIKW 457
>gi|149758758|ref|XP_001490420.1| PREDICTED: nuclear prelamin A recognition factor [Equus caballus]
Length = 456
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 232/427 (54%), Gaps = 14/427 (3%)
Query: 57 GREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTI 116
G KL +I L+DCLAC C+T+ E V ++QQ+ ++ +V+ N +K + K +
Sbjct: 38 GEFHKLADAKIFLSDCLACDSCVTAEEGVQVSQQNAKDFFRVL---NLNKKCNTSEHKVL 94
Query: 117 VLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR 176
+S+ Q + AKF+LS +LCGF K LGV V D IA FS++E + EF+ R
Sbjct: 95 AVSVCPQSLPYFAAKFSLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQREFVRR 154
Query: 177 FLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
+ P+ TS CPGWV YAE+ G + P++ KSPQQ+MGSL+K + A +
Sbjct: 155 YHQHSEGEPALPMLTSACPGWVRYAERVLGHPVTPHLCTAKSPQQIMGSLVKDYFARRQN 214
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQE 291
+ P I+HV + PCYDKKLEA R DF + R DCV+T+ E+ ++ +
Sbjct: 215 LSPDKIFHVVVAPCYDKKLEALRDDFPSALRSSRGADCVLTSGEIVQIMEQSDVSV---- 270
Query: 292 EKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
KD +D + + + G S G +V HA ++L + V ++ LRN D +
Sbjct: 271 -KDAAVDTLFGDCKEEEVRRHGGASSDGCLVHVFRHAAKELFNEDVGEVTYRTLRNKDFQ 329
Query: 352 EATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
E T G+V LRF A GFRNIQN+I KLK+ + PY F+E++AC GCLNG Q + E
Sbjct: 330 EVTLEKNGEVLLRFAAAYGFRNIQNVILKLKKGKSPYHFVEVLACAGGCLNGRGQAQTED 389
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
+ K ++E I D+ P +A ++ LY+ WL G + + + L+T+Y
Sbjct: 390 GRADKALLRQMEGIYADVPVRAPEASARVQELYQEWLDGADSPRVQEALHTAYQGPGHPA 449
Query: 471 IALNVKW 477
+ ++KW
Sbjct: 450 NSRDIKW 456
>gi|126309437|ref|XP_001368190.1| PREDICTED: nuclear prelamin A recognition factor [Monodelphis
domestica]
Length = 456
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 245/464 (52%), Gaps = 25/464 (5%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGRE-EKLKKVEISLTDCLACSGCITS 81
+ECIK I+ I + Y + E KL +I L+DCLA C+T+
Sbjct: 9 KECIKKTKIDDHQS------ISVDTLNFYSEHEEKSEFHKLADAKIFLSDCLASDTCVTA 62
Query: 82 AESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVA 141
E + + QQ+ +E +++ N +K + + K + +S+ Q + AKF LS
Sbjct: 63 EEGIRVFQQNQKEFFRIL---NLNKKCDSSHHKVLAVSICPQSLPYFAAKFNLSITDASK 119
Query: 142 KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYA 196
+LCGF K LGV V D IA FS++E + EF+ R+ P+F S CPGW+ YA
Sbjct: 120 RLCGFLKSLGVHYVFDSAIAADFSILESQKEFVYRYRQQNQKEHSLPMFASACPGWIRYA 179
Query: 197 EKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD 256
E+ G + P+I KSPQQ+MGSL+K + A + + P+ I+H+ + PCYDKKLEA R D
Sbjct: 180 ERVLGNPVTPHICTAKSPQQIMGSLVKDYFARQQNLSPAKIFHIIVAPCYDKKLEALRED 239
Query: 257 FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
FY DVDCV+T+ E+ ++ + K+ +D + E ++ T
Sbjct: 240 FYTASYNSHDVDCVLTSGEIIQIMEQKKELV-----KEAAVDNLFGEIKEGDIVQDGRTR 294
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S GY ++ +A ++L + + +K L+N D +E + G++ LRF A GFRNIQN
Sbjct: 295 SDGYLEHIFKYAAKELFDMDIKEITYKALKNKDFQEISLEKNGEIVLRFAAAYGFRNIQN 354
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
++ KLK+ + PY F+E++ACP GCLNG Q + E K +E + ++ P
Sbjct: 355 MVLKLKKGKFPYHFVEVLACPGGCLNGKGQTQTEDGKPDKALLRRMEEVYAEIPVQLPET 414
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNI--PKNNIALNVKW 477
N ++ LY+ WL G + K L+T+Y P +N+ ++KW
Sbjct: 415 NTHVQRLYQEWLDGIDSPKVLEALHTTYSAAEPPTDNV--DIKW 456
>gi|281354394|gb|EFB29978.1| hypothetical protein PANDA_016122 [Ailuropoda melanoleuca]
Length = 463
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 234/466 (50%), Gaps = 47/466 (10%)
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
G KL +I L+DCLAC C+T+ E + ++QQ+ ++ +V+ N +K K
Sbjct: 1 KGEFHKLADAKIFLSDCLACDSCVTAEEGLQVSQQNAKDFFRVL---NLNKKCDVSQHKV 57
Query: 116 IVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
+ +S+ Q + AKF LS +LCGF K LGV V D IA FS++E + EF+
Sbjct: 58 LAVSVCPQSLPYFAAKFRLSVTDASRRLCGFLKGLGVHYVFDTAIAAGFSILESQKEFVR 117
Query: 176 RFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
R+ P+ TS CPGWV YAE+ G + P++ KSPQQ+MGSL+K + A +
Sbjct: 118 RYQRHSEGEPALPMLTSACPGWVRYAERVLGHPVTPHLCTAKSPQQIMGSLVKDYFARRQ 177
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAV---------------- 274
+ P I+HV + PCYDKKLEA R DF G R DCV+T+V
Sbjct: 178 NLSPDKIFHVIVAPCYDKKLEALREDFPTASHGSRGADCVLTSVMVPKVTLTEAPVGEII 237
Query: 275 -------------------ELEVLLANELATTTLQEE---KDGILDWPWDEHNPHRMLLV 312
L +L E+ Q + KD +D + +
Sbjct: 238 LEAAPEEAAGMGLCGSFHGALRLLFVGEIIQIMEQSDLAVKDAAVDTLFGGLKEEEVRRH 297
Query: 313 NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFR 371
+G S GY +V HA +QL + V ++ LRN D +E T G+V LRF A GFR
Sbjct: 298 DGASSDGYLAHVFRHAAKQLFDEDVGEVTYRTLRNKDFQEVTLEKNGEVLLRFAAAYGFR 357
Query: 372 NIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKS 431
NIQN++ KLK+ R PY F+E++AC GCLNG Q + E + K ++E I D+
Sbjct: 358 NIQNVVLKLKKGRFPYHFVEVLACAGGCLNGRGQAQTEDGHADKALLRQMEGIYADIPVR 417
Query: 432 EPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
P +A ++ LY+ WL G + + + L+T Y ++ ++KW
Sbjct: 418 PPETSAHVQELYQEWLDGVDSPRVQEALHTMYQGPGLRAVSRDIKW 463
>gi|402224205|gb|EJU04268.1| iron hydrogenase [Dacryopinax sp. DJM-731 SS1]
Length = 602
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 184/474 (38%), Positives = 248/474 (52%), Gaps = 84/474 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-----PIEKPSGPRTGAKIRIQDDGAYIQ------E 54
FSG L LTDL+DFI PSQ CIKP+ P+ +P T +I + G Y +
Sbjct: 3 FSGALTLTDLNDFINPSQACIKPVEQFNKPVAEPGAAAT--QIEVDAQGGYYEVAQGAVG 60
Query: 55 TNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTK 114
++G +KL+ +ISL DCLACSGCITSAESVLIT QSHEEV+ + N + A + +
Sbjct: 61 SSGSRKKLETAQISLNDCLACSGCITSAESVLITLQSHEEVLNFLSTNPPYSAPGH---R 117
Query: 115 TIVLSLAIQPVLSLGAKFALS-----HEQVVAKLC---GFFKRLGVDLVLDVGIAHCFSL 166
+LS++ Q + SL A + S H +++L GFF+ D IAH
Sbjct: 118 IPILSISPQSLASLSASLSPSPPISAHLHRISQLASQLGFFRTY--DTTFARHIAHLEQA 175
Query: 167 VELENEFLDRFLSGGG-------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMG 219
VE + GG P+ S CPGWVCYAEK+HGE +LP++SRVKSPQQ+MG
Sbjct: 176 VEFSERAEAKRQGNGGEGAEERLPMLASACPGWVCYAEKTHGE-MLPFMSRVKSPQQIMG 234
Query: 220 SLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVL 279
+L+K L + G P IYHVT+MPCYDKKLEASR DFYNE+ RDVDCV+T EL +L
Sbjct: 235 TLVKEWLGSQWGASPEQIYHVTVMPCYDKKLEASRQDFYNEQYSTRDVDCVLTTGELALL 294
Query: 280 LANE-LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVL--------SHAIR 330
L + + + D+ PH G+ SG Y H+++ + +
Sbjct: 295 LREKGFDLSQPAPSESFAADYEIPSFVPH-----PGSTSGSYLHSLIHSIVTSSSTKLVL 349
Query: 331 QLCP--GESPVVEFKPLRNPDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRK----- 383
+ C G + VE+ L+ EA + R GFRN+QNL++K+ R
Sbjct: 350 ETCAVRGSADYVEYT-LKPAQTEEAGPS--QPVFRAATCYGFRNLQNLVRKVARDAGVVT 406
Query: 384 ------RLP--------------------YDFIEIMACPSGCLNGGAQIRNEKV 411
RLP YDF+E+MACP GC+NGG Q++ V
Sbjct: 407 GKGALGRLPGATARRRLRPGATTTEGDNAYDFVEVMACPGGCVNGGGQMKPSDV 460
>gi|327264675|ref|XP_003217137.1| PREDICTED: nuclear prelamin A recognition factor-like isoform 1
[Anolis carolinensis]
Length = 459
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 227/423 (53%), Gaps = 11/423 (2%)
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
KL +I L+DCLAC C+TS E+ + QQ+ +E V+ N +K K + +S+
Sbjct: 42 KLANSKIFLSDCLACDSCVTSDEAARVFQQNQKEFFHVL---NLNKKCDTSKHKVLAVSI 98
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
Q + AKF L + +LCGF K LGV V D IA FS++E + EF+ R+ +
Sbjct: 99 CPQSLPYFAAKFNLCVTEAAKRLCGFLKCLGVHYVFDTTIAADFSILESQKEFVQRYRNQ 158
Query: 181 GG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
P+F S CPGW+ YAE+ + P+I KSPQQ+MGSLIK + A + +
Sbjct: 159 NQEEHALPMFASACPGWIQYAERVLSSLVTPHICTAKSPQQIMGSLIKGYFARQQNLSSD 218
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
I+H+ + PCYDKKLEA R D Y +DVDCV+T+ EV E +L+E +
Sbjct: 219 KIFHIIVAPCYDKKLEALREDVYAPLYHSQDVDCVLTSG--EVFQVMEQRKVSLKEAAEV 276
Query: 296 ILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
D + N ++ +G S GY ++ HA ++L E + +K L+N D +E T
Sbjct: 277 PFDTLFGGINESDLMRHDGRRSDGYLEHIFKHAAKELFDTEVKELTYKVLKNKDFQEVTL 336
Query: 356 -TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
G+ LRF A GFRNIQN++ KLK+ + Y F+E++ACP GCLNG Q + E
Sbjct: 337 EKGGETVLRFAAAYGFRNIQNMVLKLKKGKCSYHFVEVLACPGGCLNGKGQAQTEDGKPD 396
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
K ++E + + P N ++ LY+ WL G + K + L+T Y + +L+
Sbjct: 397 KALLKQMEEVYAAVPVQLPETNGHVQKLYQEWLEGMDSVKVQQSLHTKYSSEKPVANSLD 456
Query: 475 VKW 477
+KW
Sbjct: 457 IKW 459
>gi|348558154|ref|XP_003464883.1| PREDICTED: nuclear prelamin A recognition factor-like isoform 1
[Cavia porcellus]
Length = 455
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 233/428 (54%), Gaps = 15/428 (3%)
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
G KL +I L+DCLAC C+T+ E ++QQ+ +++ +V+ N +K K
Sbjct: 37 KGEFHKLADAKILLSDCLACDSCVTAEEGAQLSQQNAKDLFRVL---NLNKKCDTSKHKV 93
Query: 116 IVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
+V+S+ Q + AK LS +LCGF K LGV V D+ IA FS++E + EF+
Sbjct: 94 LVVSVCPQSLPYFAAKLNLSVTDASRRLCGFLKSLGVHYVFDMAIAADFSILESQREFVR 153
Query: 176 RFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
R+ P+ TS CPGWV YAE+ G + P++ KSPQQVMGSL+K + A++
Sbjct: 154 RYHQHSDEQRALPMLTSACPGWVRYAERVLGRPVTPHLCTAKSPQQVMGSLVKDYFAKQQ 213
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQ 290
+ P I+HV + PCYD+KLEA + F G R DCV+T+ E+ ++ +
Sbjct: 214 NLPPEKIFHVVVAPCYDRKLEALQEGFSTAAPGARGTDCVLTSGEVAQIMDQSGLSV--- 270
Query: 291 EEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI 350
KD +D + + M +G GS G+ +V HA ++L + + PLRN D
Sbjct: 271 --KDAAVDTLFGDEEV-AMRRHDGAGSDGHLAHVFRHAAKELFNERVEEITYCPLRNKDF 327
Query: 351 REATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
+E T G+V LRF A GFRN+QNL+ KL++ + PY F+E++ACP GCLNG Q + +
Sbjct: 328 QEVTLEKNGEVLLRFAAAYGFRNVQNLVLKLRKGKFPYHFVEVLACPGGCLNGRGQAQTK 387
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
K ++E I D+ P + ++ LY+ WL G + + L+T++ +
Sbjct: 388 DGHMDKSLLRQMEGIYADIPVQPPESSTHVQELYQEWLEGTDSLRAHETLHTTFQSPEFC 447
Query: 470 NIALNVKW 477
+ L++KW
Sbjct: 448 SAGLDMKW 455
>gi|393235155|gb|EJD42712.1| iron hydrogenase [Auricularia delicata TFB-10046 SS5]
Length = 463
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 189/507 (37%), Positives = 264/507 (52%), Gaps = 81/507 (15%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRT---GAKIRIQDDGAYIQETNGREEKL 62
FS L LTDL+DF+ PSQ CIKP+ E P P A+I I DGAY + ++L
Sbjct: 3 FSSALTLTDLNDFLAPSQACIKPV--EAPPLPAREPGAAEITIGSDGAYFESG----KRL 56
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE-NNAHKASSNENTKTIVLSLA 121
++ +I+L DCLACSGCITSAESVL+ QS +EV+ R H A VLS++
Sbjct: 57 QQAQITLNDCLACSGCITSAESVLVAAQSADEVLNATRALPTGHVA---------VLSVS 107
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
Q + +L + + + +Q + + + + L V+ V D A + E EF +R +
Sbjct: 108 PQTLAALASSSSTTLQQTLDSVTAWARSALRVNAVFDTTFARHIARHETVREFHERKAAN 167
Query: 181 -GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
GP+ CPGWVCYAEK+HG+ +LP +S +S Q VMG L+K LA K G PS IYH
Sbjct: 168 VPGPMLAGACPGWVCYAEKTHGQ-LLPLMSATRSAQAVMGVLVKHWLARKWGKKPSEIYH 226
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDW 299
+T+MPCYDKKLEASR DF +++ R+VDCV++ EL L+ + A DG
Sbjct: 227 ITVMPCYDKKLEASRPDFAPDDV--REVDCVLSTGELAQLMRDVPA--------DGPPAP 276
Query: 300 PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGD 359
D+ PH +L GT SG + H +L+ A + PG + RN D ++ T + D
Sbjct: 277 SLDDSIPH-LLTHAGTSSGSFLHALLADAAERH-PG---AILQHTERNADWQDYTLSMPD 331
Query: 360 VT--LRFCIANGFRNIQNLIQKLKRKRLP---------------YDFIEIMACPSGCLNG 402
T R GFRNIQNL+++LK+K P YDF+E+MACP GC+ G
Sbjct: 332 GTPIFRGATCYGFRNIQNLVRRLKQKDKPVPARRRQTAAADAATYDFVEVMACPGGCVAG 391
Query: 403 GAQIRNEKVA---------SPKETA---LELETILCDLAKSEPRENATLEHLYKAWLGGK 450
G Q+ + A S +E A LE E +L +A L +
Sbjct: 392 GGQLVKGRAAAKDVEEVYWSSQEDAAALLEAEQLLTRIASD---------------LWAE 436
Query: 451 STDKGKHMLNTSYHNIPKNNIALNVKW 477
+ +L TSY + + + L VKW
Sbjct: 437 DNGERSKLLRTSYKAVESDVVGLGVKW 463
>gi|348502365|ref|XP_003438738.1| PREDICTED: nuclear prelamin A recognition factor-like [Oreochromis
niloticus]
Length = 462
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/432 (35%), Positives = 242/432 (56%), Gaps = 21/432 (4%)
Query: 47 DDGAYI----QETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIREN 102
DDGA +E NG+ + ++ L+ CL+C GC++ +++ I+QQ EEV +V+ N
Sbjct: 26 DDGANSNQESEEVNGQVNE--GSQLLLSACLSCDGCLSDEDTLKISQQGLEEVERVLALN 83
Query: 103 NAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAH 162
AS + K +V S+ Q + KF + + KLCGF K +GV V D +A
Sbjct: 84 KKCDASKH---KVLVASVCPQSLPFFAVKFGVDITEAAHKLCGFLKHIGVQYVFDTTLAA 140
Query: 163 CFSLVELENEFLDRFL-----SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQV 217
FS++E + EF+ R+ S P+FTS CPGW+ Y+E+ G + P+I +SPQQ+
Sbjct: 141 GFSILESQKEFIQRYRRRHHDSHALPMFTSSCPGWIRYSERVLGSLVTPHICTARSPQQI 200
Query: 218 MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELE 277
MG L+K + +++ + P +YHV + PC+DKKLEA R +FYN L RDVDCV+T+ ++
Sbjct: 201 MGCLVKDYFSKQQKLSPEKLYHVVVAPCFDKKLEAVREEFYNSMLETRDVDCVLTSGQIY 260
Query: 278 VLLANELATTTLQEEKDGI-LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE 336
L+ + EE D + LD + ++ +G GS G+ +V HA ++L +
Sbjct: 261 YLMEQRKVSV---EELDSVPLDQVLGDGGDVALVRHDGRGSEGFLEHVFKHAAKELFGVD 317
Query: 337 SPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMAC 395
+ +K LRN D +E T G+ L+F GFRNIQ L+ ++++ R+PY +E+++C
Sbjct: 318 VQEITYKTLRNRDFQEVTLERDGETLLQFAAVYGFRNIQTLVHRMRKGRVPYQLVEVLSC 377
Query: 396 PSGCLNGGAQIRNEKVASPKETAL--ELETILCDLAKSEPRENATLEHLYKAWLGGKSTD 453
P GCL+G Q +E A + AL ++E I L P N L LY+ WL G+ +
Sbjct: 378 PGGCLSGRGQAESEGGAGRLDKALVNQMEEIYSSLPVRLPEFNPALHTLYQEWLEGQDSS 437
Query: 454 KGKHMLNTSYHN 465
+ + +L+T Y +
Sbjct: 438 QARKLLHTEYRD 449
>gi|395536807|ref|XP_003770403.1| PREDICTED: nuclear prelamin A recognition factor [Sarcophilus
harrisii]
Length = 438
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 230/425 (54%), Gaps = 36/425 (8%)
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
KL +I L+DCLA C+T E + + QQ+ +E +++ N +K K + +S+
Sbjct: 42 KLADAKIFLSDCLASDSCVTVEEGIKVFQQNQKEFFRIL---NLNKKCDTSVHKVLAVSI 98
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
Q + AKF LS +LCGF K LGV V D IA FS++E + EF+ R+
Sbjct: 99 CPQSLPYFAAKFNLSVTDASKRLCGFLKSLGVHYVFDSTIAVDFSILESQKEFVYRYRQQ 158
Query: 181 GG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
P+F S CPGW+ YAE+ G ++P+I KSPQQ+MGSL+K + A + + P
Sbjct: 159 KQEEHSLPMFASACPGWIQYAERVLGNPVIPHICTAKSPQQIMGSLVKDYFARQQNLSPD 218
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
I+H+ + PCYDKKLEA R DFY DVDCV+T+ + ++ E+ +E+D
Sbjct: 219 KIFHIIVAPCYDKKLEALREDFYTASYNSHDVDCVLTSGK---MMFGEI------KEEDT 269
Query: 296 ILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
+ D T S GY ++ +A ++L + +K L+N D +E T
Sbjct: 270 VND--------------GTTRSDGYLEHIFKYAAKELFDMNIKEITYKALKNKDFQEVTL 315
Query: 356 -TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
G++ LRF A GFRNIQN++ KLK+ + PY F+E++ACP GCLNG Q + E
Sbjct: 316 EKNGEIMLRFAAAYGFRNIQNMVLKLKKGKFPYHFVEVLACPGGCLNGKGQTQTEDGKPD 375
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN--IPKNNIA 472
K +E + ++ P N ++ LY+ WL G + K + L+T+Y + +P +N
Sbjct: 376 KALLRRMEEVYAEIPVQLPETNTHVQKLYQEWLDGMDSPKVQEALHTTYSSAELPTDN-- 433
Query: 473 LNVKW 477
+++KW
Sbjct: 434 MDIKW 438
>gi|339233522|ref|XP_003381878.1| nuclear prelamin A recognition factor [Trichinella spiralis]
gi|316979259|gb|EFV62068.1| nuclear prelamin A recognition factor [Trichinella spiralis]
Length = 422
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 231/399 (57%), Gaps = 26/399 (6%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S FSG ++LTDL+DFI PSQ CIKPI ++K S ++R D I +++ + L
Sbjct: 27 SMSFSGTVRLTDLNDFIAPSQNCIKPI-LDKRSTANQSERMRFDRDE--INKSSQEKRIL 83
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE-NNAHKASSNENTKTIVLSLA 121
K V ++L DCLACSGCITSAE+VLI QQ +E +K+I E +N +K S E V+S++
Sbjct: 84 KPVSVTLDDCLACSGCITSAETVLIEQQGPKEFLKMIEEFSNDNKVISKELKSLFVVSIS 143
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A + L+ E KLC F + LG D+ LD A FSL+ EF+D +
Sbjct: 144 PQSRASLAASYNLTVEVTQRKLCAFLRSLGADICLDTTFARNFSLLATAEEFVDYYRKNY 203
Query: 182 ----------GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
PL T+ CPGWVCYAEKS + ++P +S+V+SPQ + GS +K +L++ +
Sbjct: 204 LNCTSTSLSISPLITAICPGWVCYAEKSVSDVVIPLMSKVRSPQAIAGSFVKDYLSKTMN 263
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQE 291
+ P+ I HVT+MPC+DKKLEASR+ F ++ R+VD V++ ++ +++ E
Sbjct: 264 ILPNRIRHVTIMPCFDKKLEASRSAFLADDGSSREVDLVLSTSDIYMIVI---------E 314
Query: 292 EKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
D L +D + + + G+GSGGY V +A ++L + VE+ RN DI+
Sbjct: 315 NSD--LLCLFDIFDENTLYNHEGSGSGGYLEFVFKYAAKELFNLDVSSVEYVAQRNKDIQ 372
Query: 352 EATFTCGD-VTLRFCIANGFRNIQNLIQKLKRKRLPYDF 389
EA + V + GFRNIQNLI+K++ + Y F
Sbjct: 373 EARLIHDNKVLFHMALCYGFRNIQNLIRKIRAGKCAYHF 411
>gi|125587922|gb|EAZ28586.1| hypothetical protein OsJ_12572 [Oryza sativa Japonica Group]
Length = 414
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/427 (40%), Positives = 233/427 (54%), Gaps = 50/427 (11%)
Query: 77 GCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSH 136
GCITSAE+V++ +QS + + I + K +++S++ Q SL A F LS
Sbjct: 12 GCITSAETVMLEKQSLGDFITRINSD-----------KAVIVSVSPQSRASLAAFFGLSQ 60
Query: 137 EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF----LSGGG------PLFT 186
QV KL FK +GV V D + SL+E +EF+ R+ LS G P+ +
Sbjct: 61 SQVFRKLTALFKSMGVKAVYDTSSSRDLSLIEACSEFVTRYHQNQLSSGKEAGKNLPMLS 120
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGW+CYAEK+ G FILPYIS VKSPQQ +G+ IK H+ KLG+ P +YHVT+MPCY
Sbjct: 121 SACPGWICYAEKTLGSFILPYISAVKSPQQAIGAAIKHHMVGKLGLKPHDVYHVTVMPCY 180
Query: 247 DKKLEASRADFYN--EELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGILDWPWDE 303
DKKLEA R DF E+ +VD V+T E L+++ + + TL+E
Sbjct: 181 DKKLEAVRDDFVFSVEDKDVTEVDSVLTTGEVLDLIQSRSVDFKTLEE------------ 228
Query: 304 HNPHRMLLVNGTGSG----------GYAHNVLSHAIRQLCPGE-SPVVEFKPLRNPDIRE 352
+P LL N G GYA V HA L + V+F+ LRN D RE
Sbjct: 229 -SPMDRLLTNVDDDGQLYGVSGGSGGYAETVFRHAAHVLFDRKIEGSVDFRILRNSDFRE 287
Query: 353 ATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
T G L+F + GFRN+QN+I+K+K + Y FIE+MACPSGCLNGG QI+ K
Sbjct: 288 VTLEVEGKPVLKFALCYGFRNLQNIIRKIKMGKCEYHFIEVMACPSGCLNGGGQIKPAKG 347
Query: 412 ASPKETALELETI-LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
S K+ LE + + D++ S P EN + LY WLG ++ K L+T YH + K+
Sbjct: 348 QSAKDLIQLLEDVYIQDVSVSNPFENPIAKRLYDEWLGQPGSENAKKYLHTKYHPVVKSV 407
Query: 471 IALNVKW 477
+ W
Sbjct: 408 ASQLQNW 414
>gi|449283118|gb|EMC89821.1| Nuclear prelamin A recognition factor, partial [Columba livia]
Length = 487
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 151/456 (33%), Positives = 231/456 (50%), Gaps = 43/456 (9%)
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L +I L+DCLAC C+TS E + QQ+ +E+ +V+ N +K K + +S+
Sbjct: 35 LANAKILLSDCLACDNCMTSEEGARVFQQNQKELFRVL---NLNKKCDTSKHKVLAVSIC 91
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q + AKF LS +LCGF K LGV V D IA FS++E + EF+ R+
Sbjct: 92 PQSLPYFAAKFNLSVNDAAKRLCGFLKSLGVHYVFDTTIAADFSILESQREFVQRYQRRN 151
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+F S CPGW+ YAE+ + P+I KSPQQ+MGSL+K + A + + P
Sbjct: 152 QEEHALPMFASACPGWIRYAERVLTNLVTPHICTAKSPQQIMGSLVKGYFARQQNLSPDK 211
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITA----------------------- 273
I+HV + PCYDKKLEA R DFY ++VDCV+T+
Sbjct: 212 IFHVIVAPCYDKKLEALREDFYTALYNSQEVDCVLTSGERCEVWGKLKALDFRAGSVGLL 271
Query: 274 -----------VELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAH 322
E E++ E ++++ + +D +D ++ +G S GY
Sbjct: 272 HGWRELTLTRVGECEIVHIMEQKNVSMKDVTEVAVDSLFDGIKEGDVVRHDGKRSDGYLE 331
Query: 323 NVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLK 381
++ HA ++L + + +K L+N D +E T G+ LRF A GFRNIQN++ KLK
Sbjct: 332 HIFKHAAKELFGMDVKEITYKALKNKDFQEVTLEKDGETVLRFAAAYGFRNIQNMVLKLK 391
Query: 382 RKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEH 441
+ + Y F+E++ACP GCLNG Q + E K ++E + + P N +E
Sbjct: 392 KGKFLYHFVEVLACPGGCLNGKGQAQTEDGKPDKALLNQMEEMYAAIPVRLPETNVHVEK 451
Query: 442 LYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+Y+ WL G + K + L+T Y + + L++KW
Sbjct: 452 MYQDWLEGMDSKKVQETLHTKYSAVNQTASNLDIKW 487
>gi|426197521|gb|EKV47448.1| hypothetical protein AGABI2DRAFT_185390 [Agaricus bisporus var.
bisporus H97]
Length = 590
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 204/610 (33%), Positives = 289/610 (47%), Gaps = 160/610 (26%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-----PI--EKPSGPRTGAKIRIQDDGAYIQ----- 53
FSG L LTDL+DFI PSQ CIKP+ P+ EK +G +I I G Y +
Sbjct: 3 FSGALTLTDLNDFITPSQACIKPVEQTNKPVQQEKDAGA-AATEIHIDGSGTYYEVAQDG 61
Query: 54 -ETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN 112
+ GR KL++ +ISL DCLACSGCITSAESVLIT QSH EV+ V+ S+ +
Sbjct: 62 GDVTGR--KLEQAQISLNDCLACSGCITSAESVLITLQSHVEVLSVL--------SNPSD 111
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKR--------LGVDLVLDVGIAHCF 164
+ ++S+A Q + SL A ++ + + F+R LG V D A
Sbjct: 112 ERIPIISIAPQSLASLAAAYSQHNPSELLTPREIFRRIRTFCTSILGFAYVFDTNFARHI 171
Query: 165 SLVELENEFLDR---FLSGGG------------PLFTSECPGWVCYAEKSHGEFILPYIS 209
SL E EF++R L+ G P+ S CPGW+CYAEK+H E +LP+I+
Sbjct: 172 SLNEHVKEFIERREQHLAKGDDDGSPRSPSETLPMLASACPGWICYAEKAHPE-MLPFIA 230
Query: 210 RVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDC 269
R KSPQQVMG+L+K + ++LG P+ IYHV++MPCYDKKLEASR DF+++ RDVDC
Sbjct: 231 RTKSPQQVMGTLVKKWIGKRLGKQPNEIYHVSVMPCYDKKLEASRQDFFDDIFQTRDVDC 290
Query: 270 VITAVELEVLLAN---ELATTTLQEEKD-------GILDWPWDEHNPH----RMLLVNGT 315
V+T ELE+++ +L T++ Q D + D +P ++ +GT
Sbjct: 291 VVTTGELELMMKEFGWDLKTSS-QSPSDLTTSRSIPLKDLTSARRHPGIDLPELVTHSGT 349
Query: 316 GSGGYAHNVLSHAIRQLCPGESPV---VEFKPLRNPDIREATF----------TCGDVTL 362
SG Y H++L H SPV + K +RN D E G V
Sbjct: 350 SSGSYLHSILRHLTET-----SPVPLMLSVKTVRNSDYEEYVLRESAPSLSGDAVGKVIF 404
Query: 363 RFCIANGFRNIQNLIQKLKRKR-------------------------------------- 384
+ GFRN+QN+++K+ R+R
Sbjct: 405 KGAKCYGFRNLQNVVRKVGRERGVRVGSGAAGRLGAPGGAGKGVRRLRAARKGQGGEGGA 464
Query: 385 ------LPYDFIEIMACPSGCLNGGAQIRNEK--------------------VASPK--- 415
YD++E+MACP GC+NGG Q++ AS K
Sbjct: 465 PGGDGERKYDYVEVMACPGGCVNGGGQLKPPDGTSLDAEGYQRDWDGEGAIPSASAKWGD 524
Query: 416 -------ETALELETILCDLAKSEPR-ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
E A +T D +S + + +E L++A+ G S KG + T Y +
Sbjct: 525 KGWTKKVEEAYWRDTGRVDAERSADQVADGIVEELWEAY--GDSEKKG--LFRTEYRAVE 580
Query: 468 KNNIALNVKW 477
+ + L VKW
Sbjct: 581 SDVVGLAVKW 590
>gi|307103448|gb|EFN51708.1| hypothetical protein CHLNCDRAFT_139858 [Chlorella variabilis]
Length = 545
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 188/562 (33%), Positives = 263/562 (46%), Gaps = 109/562 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDD---GAYIQETNGREEKL 62
FSG +++ DL+DFI PSQ C+ + +E G K+ D G + G + L
Sbjct: 3 FSGAVKIGDLNDFIAPSQACV--VSLE-------GGKLAAASDAEVGTVQLQPRGFSQTL 53
Query: 63 -----KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIV 117
+ V++SL DCLACSGC+TSAE+VL+ QS E+++ + + + T+V
Sbjct: 54 PAAVDQPVKVSLHDCLACSGCVTSAETVLLQHQSAGELLQRL----------ADPSWTVV 103
Query: 118 LSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF 177
+SL+ Q V L A L + A+L F ++LG V D+ A +L E +EF+ R+
Sbjct: 104 VSLSPQSVAVLAALHGLPAAECAARLVAFLRQLGAAAVFDIAAARQLALAEAAHEFVQRY 163
Query: 178 -------------------------------------LSGGGPL--FTSECPGWVCYAEK 198
GGGPL S CPGWVCYAEK
Sbjct: 164 SQSARGTAALSAAAAAAAAAAGEDAMDVDAAVAGRGSRDGGGPLPMLASACPGWVCYAEK 223
Query: 199 SHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFY 258
+HGE +LPYI+ KSPQ VMG+L+K G+ P+ +YH T+MPCYDKKLEA+R DF
Sbjct: 224 THGEHVLPYIATGKSPQAVMGTLVKRRWCMAAGLLPAWVYHCTIMPCYDKKLEAAREDFN 283
Query: 259 NEELGYRDVDCVITAVELEVLLANELAT-TTLQ---------------------EEKDGI 296
+ DCV+ EL+ LL A +LQ DG
Sbjct: 284 LPGTQVPETDCVLATTELQELLEQRQADLGSLQGAPFDSMVPLPAAGAAAAPACNGSDGA 343
Query: 297 L----DWPWDEHNPHRM-------LLVNGTGSGGYAHNVLSHAIRQLCPGESPV--VEFK 343
W P L +GSGGY V A RQL + P + +
Sbjct: 344 GASSNGWHAAPKPPTSSSGSDAGGTLPASSGSGGYLEYVFRAAARQLFGRQLPAGPLAMR 403
Query: 344 PLRNPDIREATFTC---GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCL 400
RN D+RE T G LRF A GFRNIQ L++K+K R YD++E+MACPSGCL
Sbjct: 404 VGRNADLREVTLEAPGGGPPLLRFAAAYGFRNIQGLMRKVKLGRCEYDYVEVMACPSGCL 463
Query: 401 NGGAQIRNEKVASPKETALELETILCDLAKS----EPRENATLEHLYKAWLGGK-STDKG 455
NGG Q + + + +LET+ D +P + ++ LY W+ G+ ++
Sbjct: 464 NGGGQPKPAAGQTSAQLLEQLETLYADAGSGHGAVQPDADPAVQQLYHEWVQGQPGSEAA 523
Query: 456 KHMLNTSYHNIPKNNIALNVKW 477
+ +L+ YH K A W
Sbjct: 524 RQLLHMQYHKREKTVTATLADW 545
>gi|317419132|emb|CBN81169.1| Nuclear prelamin A recognition factor [Dicentrarchus labrax]
Length = 461
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 225/408 (55%), Gaps = 14/408 (3%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++ L+ CL+C GC+T ES+ I+QQS +EV +V+ N S + K +V S+ Q +
Sbjct: 47 QLLLSACLSCDGCLTEEESLKISQQSLQEVERVLALNKKCDVSKH---KVLVASICPQSL 103
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-----SG 180
KF L + KLCGF K LGV V D +A FS++E + EF+ R+ +
Sbjct: 104 PFFAVKFGLDVTEAAHKLCGFLKSLGVQYVFDTTLAAGFSILESQKEFIQRYRRRHHDTH 163
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+FTS CPGW+ Y+E+ G + P+I +SPQQ+MG L+K + +++ + P +YHV
Sbjct: 164 AMPMFTSSCPGWIRYSERVLGSLVTPHICTARSPQQIMGCLVKDYFSKQQKLSPEKVYHV 223
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI-LDW 299
+ PC+DKKLEA R +FYN L RDVDCV+T+ E+ L+ + E D + LD
Sbjct: 224 LVAPCFDKKLEAVREEFYNSLLETRDVDCVLTSGEIYCLMEQRKVSV---EGPDSVPLDH 280
Query: 300 PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-G 358
E ++ G GS G+ ++ HA ++L + + +K LRN D +E T G
Sbjct: 281 VLGEAGDVALVRHEGRGSEGFLEHIFKHAAKELFGLDVHEITYKNLRNRDFQEVTLERDG 340
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS-PKET 417
+ L+F GFRNIQ L+ ++++ R+PY +E+++CP GCL+G Q +E K
Sbjct: 341 ETLLQFAAVYGFRNIQTLVHRMRKGRVPYQLVEVLSCPGGCLSGRGQAESEAGGRVDKAL 400
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
++E L P N L LY+ WL G+ + + +L+T Y N
Sbjct: 401 VQQMEEAYSSLPVRLPEVNPALHTLYQDWLQGQDSSQASALLHTQYRN 448
>gi|255075911|ref|XP_002501630.1| predicted protein [Micromonas sp. RCC299]
gi|226516894|gb|ACO62888.1| predicted protein [Micromonas sp. RCC299]
Length = 542
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 197/526 (37%), Positives = 271/526 (51%), Gaps = 74/526 (14%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRT----GAKIRIQDDGAYI------- 52
++FSG ++L DL+DFI PSQ CI I + P+G +K + +D Y+
Sbjct: 2 TQFSGAVKLGDLNDFINPSQACIDDIDV--PAGGEMILNKRSKAPVTEDLTYLFGQPEKP 59
Query: 53 --QETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN 110
Q ++ +++SL+DCLACSGCITSAE+VL+ QS +E ++ A A S
Sbjct: 60 IGQWGIEKKNDSDAIKVSLSDCLACSGCITSAETVLLEAQSVDE----FKQQVAACAQSG 115
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELE 170
T+V S+A Q SL LS +L GFFK +GV V D A FSL+E
Sbjct: 116 GRRVTVV-SVAPQSRASLAHAAGLSAIDAAKRLTGFFKSMGVVAVFDTTAARDFSLLEAG 174
Query: 171 NEFLDRFLSGGG---------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSL 221
EF++RF + P+ S CPGWVCYAEK +LP+IS VKSPQQVMG++
Sbjct: 175 EEFVERFRAQNQNQSQNQNPLPVLASACPGWVCYAEK-QSPGVLPHISNVKSPQQVMGTI 233
Query: 222 IKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF-------YNEELGYRDVDCVITAV 274
+K +A LG+ P+ ++HV +MPCYDKKLEASR DF + G DVDCV+T
Sbjct: 234 VKRRVAASLGLDPAAVFHVAVMPCYDKKLEASRGDFRGEPGVGGGDGEGPPDVDCVLTTG 293
Query: 275 ELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCP 334
E+ LLA +E+DG L G GSGGY +V +A ++
Sbjct: 294 EVAELLAGAYGIAV--KERDGYSTEAAGAREGAAALARGGGGSGGYLEHVFRYAAAKIFG 351
Query: 335 GE-SPVVEFK--PLRNPDIREATFTCGDVT--LRFCIANGFRNIQNLIQKLK-------- 381
E +E+K RNPD+RE T D T LRF A GFRNIQN+++K+K
Sbjct: 352 IEVRGALEYKIPRARNPDLREVTLEGPDGTTLLRFAQAYGFRNIQNMVRKIKPTAHDIHL 411
Query: 382 ---RKRLPYDFIEIMACPSGCLNGGAQIR--------------NEKVASPKETALELET- 423
R YD++EIMACPSGCLNGG Q+ + + KE ELET
Sbjct: 412 GTSRDGCGYDYVEIMACPSGCLNGGGQLPPPPPPGEIAGSGGARPRAMTAKELVDELETK 471
Query: 424 ILCDLAKSEPR---ENATLEHLYKAWL-GGKSTDKGKHMLNTSYHN 465
EPR + + Y+ W+ G +++ + + +T YH+
Sbjct: 472 YRWGDGTVEPRPPDASPEVAEAYRDWVRGAVGSERARALFHTRYHD 517
>gi|268572543|ref|XP_002648987.1| Hypothetical protein CBG21318 [Caenorhabditis briggsae]
Length = 452
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 269/483 (55%), Gaps = 37/483 (7%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M S FSGV++L+++ DFI P+ +CI P+ ++ I+ +E +E+
Sbjct: 1 MEDSGFSGVVRLSNVSDFIAPNLDCIIPLETRTVEKKNEEPQVNIRAKKTKNEENKPKED 60
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
K K V+ISL DCLAC+GCITSAE+VL+ +QS +++ IR N+K V+++
Sbjct: 61 K-KSVKISLADCLACNGCITSAETVLVEEQSFGRLLEGIR-----------NSKMAVITI 108
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q + SL K + E + + FF+R GV VLD A F+ L E L S
Sbjct: 109 SPQTITSLAVKLEKTPEDLAKLIASFFRRHGVKYVLDSSFARQFAH-SLAYEELLLTPST 167
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
PL +S CPG+VCYAEKSHGE ++P IS+++SPQ + G+++K +LA+K G+ P ++H
Sbjct: 168 SRPLLSSACPGFVCYAEKSHGELLIPKISKIRSPQAISGAIVKGYLAKKEGLSPCDVFHA 227
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
+MPC+DKKLE SR F E R+ DCV++ EL L E EE++ +W
Sbjct: 228 AVMPCFDKKLE-SREQFRVEGTEIRETDCVVSTAELLEELVKEEGVAEDVEEEE-ENNWT 285
Query: 301 WDEHNPHRMLLV--NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--- 355
+ R +++ +G SGGYA + +R +V+ L N ++ T
Sbjct: 286 ---TSLSRGIIIGEDGGASGGYADRI----VRDFVAQNGGIVKTSKL-NKNMFSTTVEST 337
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
T G++ LR GFRN+QNL++K+K K+ D++E+MACP GC NGG Q+R E + +
Sbjct: 338 TTGEIVLRVAKVYGFRNVQNLVRKMKTKKEKTDYVEVMACPGGCANGGGQVRYETMDERE 397
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKG-KHMLNTSYHNIPKNNIALN 474
+ ++E +L ++ PR N+ E + + W K D K++L T Y + + N+A
Sbjct: 398 KRLAQVE----ELYEALPRGNSWEESVREEW---KRLDTNYKNLLFTDYKPV-ETNVAQT 449
Query: 475 VKW 477
+KW
Sbjct: 450 LKW 452
>gi|308459710|ref|XP_003092170.1| CRE-OXY-4 protein [Caenorhabditis remanei]
gi|308254065|gb|EFO98017.1| CRE-OXY-4 protein [Caenorhabditis remanei]
Length = 457
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 260/480 (54%), Gaps = 26/480 (5%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M S FSGV++L+++ DFI P+ +CI P+ +K+ I+ + E +E+
Sbjct: 1 MEDSGFSGVVRLSNVSDFIAPNLDCIIPLETRTVEKKIEESKVAIRAKKT-VSENKPKED 59
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
K K ++ISL DCLAC+GCITSAE+VL+ +QS +++ IR N+K V+++
Sbjct: 60 K-KSIKISLADCLACNGCITSAETVLVEEQSFGRLLEGIR-----------NSKMAVVTI 107
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q + S+ K S + + ++ FF R GV VLD A F+ L E L +
Sbjct: 108 SPQAITSMAVKLKKSPQIIAKQISAFFHRHGVKYVLDSSFARRFAH-SLAFEELVSTPTT 166
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
PL +S CPG+VCYAEKSHGE ++P IS+++SPQ + G+++K +LA++ + P ++H
Sbjct: 167 SRPLLSSACPGFVCYAEKSHGELLIPKISKIRSPQAISGAIVKGYLAKRENLSPCDVFHA 226
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
+MPC+DKKLEASR + R+ DCV++ EL + + EK G +
Sbjct: 227 AVMPCFDKKLEASREQLKVRDTEIRETDCVVSTAELLEEIQKMEDQDSEDVEKRGEEEEE 286
Query: 301 WDEHNPHRMLL-VNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGD 359
W +++ +G SGGYA ++ H + G + I E+ + GD
Sbjct: 287 WMNALGKGIIIGEDGGASGGYADRIV-HDFVEKNGGIVKTTKLNKNMYSTIVESPES-GD 344
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
V LR GFRN+QNL++K+K K+ D++E+MACP GC NGG Q+R E +A +E +
Sbjct: 345 VILRVAKVYGFRNVQNLVRKMKTKKEKTDYVEVMACPGGCANGGGQVRYETMAEREEKLI 404
Query: 420 ELETILCDLAKSEPRENAT--LEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
++E DL PR +E + W G +++L T Y + + N+ +KW
Sbjct: 405 DVEREYDDL----PRGIGMNWVEKVKTEWEGLDGN--YRNLLFTDYKPV-ETNVGQTLKW 457
>gi|325187084|emb|CCA21626.1| nuclear prelamin A recognition factorlike protein pu [Albugo
laibachii Nc14]
Length = 517
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 174/509 (34%), Positives = 263/509 (51%), Gaps = 54/509 (10%)
Query: 12 LTDLDDFIGPSQECIKPIPI--------EKPSGPRTGAKIRIQDD---GAYIQETNG--- 57
L DL+D+I PSQ CI P+ I E S P+ + I+DD + ET
Sbjct: 20 LGDLNDYIQPSQACINPLFIDTKNPLVSEIQSDPKR-VILAIEDDWNQDVKLPETKPNII 78
Query: 58 REEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIV 117
RE ++ ISL DCLACSGC+TSAE+VLITQQS+ ++++ ++ + +
Sbjct: 79 RETAQQRATISLDDCLACSGCVTSAETVLITQQSYADMLEKLQSVPSPYFKK-------I 131
Query: 118 LSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF 177
++++ SL A F L V KL FF+ LG DL+ D G L+E EFL R+
Sbjct: 132 MTISSASRASLAAHFNLPIHVVHCKLVTFFRTLGFDLIFDTGCFENIMLLEARQEFLYRY 191
Query: 178 --------------------LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQV 217
+ P+ S CPGW+CYAEK+ LP+I KSPQQ+
Sbjct: 192 QNQTPTPWNHTQTESDSDPAIPTALPMLASSCPGWICYAEKAQPN-ALPFIDTTKSPQQI 250
Query: 218 MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL- 276
G+++K L+ + + ++HVTLMPC+DKKLEASR DF E RDVDCV+ EL
Sbjct: 251 AGTIVKDFLSREFLIESDQVFHVTLMPCFDKKLEASRKDFQRSE-DNRDVDCVLATSELI 309
Query: 277 EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGT---GSGGYAHNVLSHAIRQLC 333
++ A ++ L+E + +P ++ + SGG ++ +A + L
Sbjct: 310 DLFQAQKIEFKDLKEASLTQKEAQMSGISPDGQIVYGSSPFASSGGQLEHIFRYAAKNLF 369
Query: 334 PGE--SPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFI 390
+ P+ E+ RNPD RE + + G V L F IA GFRNIQ++I KL+R + Y ++
Sbjct: 370 NVDICGPL-EYSIGRNPDFREVSLSIQGKVVLHFAIAYGFRNIQSVITKLRRGKCSYHYV 428
Query: 391 EIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGK 450
E+MACPSGCLNGG QI+ + +L + +P+++A +++Y+ +
Sbjct: 429 EVMACPSGCLNGGGQIKPSSSLESSTLVSSVTKRFQELREYDPQKDAFCKYIYEKYFDKP 488
Query: 451 STDKGKHMLNTSYHNIPKNNIA--LNVKW 477
+ + L+T Y +PK A L ++W
Sbjct: 489 FSQVAQRALHTKYRRVPKLEQANPLGIRW 517
>gi|50539744|ref|NP_001002342.1| nuclear prelamin A recognition factor [Danio rerio]
gi|82183313|sp|Q6DHP6.1|NARF_DANRE RecName: Full=Nuclear prelamin A recognition factor
gi|49902735|gb|AAH75921.1| Nuclear prelamin A recognition factor [Danio rerio]
Length = 465
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 227/421 (53%), Gaps = 14/421 (3%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++ L+ CL+C GCI+ E I+QQ+ +E+ V+ N K K +V+S+ Q V
Sbjct: 50 QVLLSACLSCDGCISEDEGKRISQQNLDEINHVLALN---KKCDTSKHKILVVSVCPQSV 106
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-----SG 180
KF L KLCGF K +GV V D IA FS++E + EF+ R+ +
Sbjct: 107 PFFAVKFQLDVSAAAQKLCGFLKSVGVHYVFDTTIAASFSILESQREFVQRYRRKHHDAN 166
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+FTS CPGW+ YAE+ G + P+I +SPQQ+MGSL+K A + + P ++HV
Sbjct: 167 AMPMFTSSCPGWIRYAERVLGSVVTPHICTARSPQQIMGSLVKNFFARQQKLTPEQVFHV 226
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
+ PC+DKKLEA R +FYN L RDVDCV+T+ E+ L+ E + T++E LD
Sbjct: 227 VVAPCFDKKLEAVRDEFYNSILESRDVDCVLTSGEILHLM--EQSKVTVEEVDSAPLDHV 284
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GD 359
E + + +G GS G+ ++ HA +++ + + +K LRN D +E G+
Sbjct: 285 IGEISDSGLTRHDGRGSEGFLEHIFKHAAKEIFGLDVQDIVYKTLRNRDFQEVALERDGE 344
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
L+F GFRNIQ L+ ++++ ++PY IE+++CP GCL+G Q E +
Sbjct: 345 TLLQFAAVYGFRNIQTLVHRMRKGKVPYQLIEVLSCPGGCLSGRGQAEGEGGRPDRTLVQ 404
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN---IPKNNIALNVK 476
++E L P N ++ LY+ WL G + + L+T Y + +P + +++
Sbjct: 405 QMEEHYSSLPVRLPETNPEVQRLYQDWLDGHDSPHAQQSLHTQYKDHTHLPAHITNPDIQ 464
Query: 477 W 477
W
Sbjct: 465 W 465
>gi|324509319|gb|ADY43923.1| Cytosolic Fe-S cluster assembly factor [Ascaris suum]
Length = 450
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/474 (35%), Positives = 263/474 (55%), Gaps = 30/474 (6%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
FSGV++++++ DFI PSQ CI P+ + P+ + IR + + ++ +G KKV
Sbjct: 5 FSGVVRISNVSDFIAPSQACILPLRKDDPTINESLVSIRGK---SSVERADGTS---KKV 58
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+SL DCLAC+GCITSAE+VLI +QS +++ + V++++ Q V
Sbjct: 59 RVSLNDCLACNGCITSAETVLIQEQSTPMLLQGL-----------ATCSVGVVTVSPQSV 107
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPLF 185
S+ AK + ++ + FKRLGV VLD +L +EF++R P+
Sbjct: 108 CSIAAKRGIEAQKTARLIARHFKRLGVRYVLDSSFGRYLTLALSYDEFVER--RHEAPIL 165
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CPG+VCYAEK+HG+ ++P+ISRV+SPQ +MG+L+K +LA + V P I+H T+MPC
Sbjct: 166 TSACPGFVCYAEKTHGDLLVPHISRVRSPQAMMGALVKDYLARSISVEPDKIFHATVMPC 225
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW-DEH 304
+DKKLEASR F N+ R+VDCV++ E++ LL + A + E D ++ W +
Sbjct: 226 FDKKLEASRPQFANK---CREVDCVLSTAEVDKLL--DEAAGDDENEVDIAIEVNWLNAF 280
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRF 364
++ G SGGYA ++ I + + ++N + E V L+
Sbjct: 281 ENGIIIGSPGGPSGGYAEYIVRRFISDSKVDRMIIRRTQKMKNLEAIE-VIDGESVLLKV 339
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETI 424
GFRNIQNL+Q +KR + YD++E+MACPSGC NGG QIR EK A ++ L+
Sbjct: 340 AKCYGFRNIQNLVQMMKRGKAEYDYVEVMACPSGCANGGGQIRAEK-ADMRQKLLDSVVD 398
Query: 425 LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI-ALNVKW 477
++ + +E + W +D+ + TSY + +N I +N++W
Sbjct: 399 NYEMLLPNIKLENEIERVKTHW--ESLSDRFAGLCYTSYQIVDRNVIEKMNLRW 450
>gi|14165461|ref|NP_114174.1| nuclear prelamin A recognition factor isoform b [Homo sapiens]
gi|12653339|gb|AAH00438.1| NARF protein [Homo sapiens]
gi|312152386|gb|ADQ32705.1| nuclear prelamin A recognition factor [synthetic construct]
Length = 502
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/502 (32%), Positives = 247/502 (49%), Gaps = 55/502 (10%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K + A Q++G G KL +I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTDDQENVSADAPSPAQENG-----EKGEFHKLADAKIFLSDCLACDSCMTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 64 EGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA +
Sbjct: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240
Query: 258 YNEELGYRDVDCVITAVELEVLLANELATTT---------------LQEEK--------- 293
G R DCV+T+ + + T T LQ +K
Sbjct: 241 PPALHGSRGADCVLTSEISQAWWCTPVITATREAAARESLEPGRQRLQRDKIAPLDSSLG 300
Query: 294 -----------------DGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE 336
D +D + + ++ +G S G+ ++ HA ++L +
Sbjct: 301 GGGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHLAHIFRHAAKELFNED 360
Query: 337 SPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMAC 395
V ++ LRN D +E T G+V LRF A GFRNIQN+I KLK+ + P+ F+E++AC
Sbjct: 361 VEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLKKGKFPFHFVEVLAC 420
Query: 396 PSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKG 455
GCLNG Q + + K ++E I D+ P +A ++ LY+ WL G ++ K
Sbjct: 421 AGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQELYQEWLEGINSPKA 480
Query: 456 KHMLNTSYHNIPKNNIALNVKW 477
+ +L+T+Y + + +L++KW
Sbjct: 481 REVLHTTYQSQERGTHSLDIKW 502
>gi|388581203|gb|EIM21513.1| iron hydrogenase, partial [Wallemia sebi CBS 633.66]
Length = 519
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 280/551 (50%), Gaps = 113/551 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-----PIEK---PSGPRTGAKIRIQDDGAYIQETNG 57
FSG LQ+TDL+DFI P QECIKP+ P ++ P P T +I I ++G Y ++
Sbjct: 3 FSGGLQITDLNDFISPGQECIKPVKETNKPKQEEVAPDAPTT--EITIGENGEYYEQN-- 58
Query: 58 REEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIV 117
+KL+K EI+L DCLACSGCITSAE+VLI QSH EV K + ++N + KT++
Sbjct: 59 --QKLEKAEITLNDCLACSGCITSAETVLIESQSHLEVKKYLSKDN--------DKKTMI 108
Query: 118 LSLAIQPVLSLGAKFAL--SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
S++ Q + S+ A + S+E ++ +L K +G D V D + SL+E+ NEF +
Sbjct: 109 ASISPQSLASISASLSSRPSNEVLLRRLRHHLKSIGFDYVFDTTFSRHLSLLEILNEF-N 167
Query: 176 RFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
S L TS CPGW+CY EK+HGE I P+IS KSPQQVMGSL+K ++++ S
Sbjct: 168 SLDSNNRLLLTSACPGWICYVEKTHGELI-PFISTTKSPQQVMGSLVKYWFSQRINKSAS 226
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVL------LANELATTTL 289
IYHVT+MPCYDKKLEASR DFY++ RDVDCV+T+ EL L L L +
Sbjct: 227 DIYHVTIMPCYDKKLEASRQDFYSDLYQTRDVDCVLTSGELGSLFDKPINLNESLPNENI 286
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-P 348
++ ++ PH + GT SG Y N+++ I+Q P + +E RN
Sbjct: 287 VSTEEKLI--------PHHIQHP-GTSSGSYLENIMT-LIKQTTP--NLRLETHSPRNLA 334
Query: 349 DIREATFT--CGDVTLRFCIANGFRNIQNLIQKLKRKR---------------------- 384
D E + + GF+NIQNL++K+ +++
Sbjct: 335 DSVEYLLINENNECVFKGSKCYGFKNIQNLVRKVGKEKGLNSGRGAAGRMAGRGRVRTRN 394
Query: 385 -------LPYDFIEIMACPSGCLNGGAQIRNEKVASPK---ETALELETILCDLAK---- 430
DF+E+MACPSGC+NGG Q++ + + K E E E + D K
Sbjct: 395 TGNPHDSKSLDFVEVMACPSGCINGGGQLK-PGINTDKEGHERDWESEGVATDPTKNIEE 453
Query: 431 --------------------SEPRENATLEHLYKAWLGGKSTDK----GKHMLNTSYHNI 466
SE + TLE L K ST+ K L T YH I
Sbjct: 454 SVRWTTKNWINRVEDIYWTGSEASKAVTLEMLSKI-----STEMLKELSKEHLRTQYHAI 508
Query: 467 PKNNIALNVKW 477
+ L V+W
Sbjct: 509 ESDTSGLAVQW 519
>gi|189526438|ref|XP_001923641.1| PREDICTED: nuclear prelamin A recognition factor-like [Danio rerio]
Length = 465
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 226/421 (53%), Gaps = 14/421 (3%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++ L+ CL+C GCI+ E I+QQ+ +E+ V+ N K K +V+S+ Q V
Sbjct: 50 QVLLSACLSCDGCISEDEGKRISQQNLDEINHVLALN---KKCDTSKHKILVVSVCPQSV 106
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-----SG 180
KF L KLCGF K +GV V D IA FS++E + EF+ R+ +
Sbjct: 107 PFFAVKFQLDVSAAAQKLCGFLKSVGVHYVFDTTIAASFSILESQREFVQRYRRKHHDAN 166
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+FTS CPGW+ YAE+ G + P+I +SPQQ+MGSL+K A + + P ++HV
Sbjct: 167 AMPMFTSSCPGWIRYAERVLGSVVTPHICTARSPQQIMGSLVKNFFARQQKLTPEQVFHV 226
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
+ PC+DKKLEA R +FYN L RDVDCV+T+ E+ L+ E + T++E LD
Sbjct: 227 VVAPCFDKKLEAVRDEFYNSILESRDVDCVLTSGEILHLM--EQSKVTVEEVDSAPLDHV 284
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GD 359
E + + G GS G+ ++ HA +++ + + +K LRN D +E G+
Sbjct: 285 IGEISDSGLTRHEGRGSEGFLEHIFKHAAKEIFGLDVQDIVYKTLRNRDFQEVALERDGE 344
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
L+F GFRNIQ L+ ++++ ++PY IE+++CP GCL+G Q E +
Sbjct: 345 TLLQFAAVYGFRNIQTLVHRMRKGKVPYQLIEVLSCPGGCLSGRGQAEGEGGRPDRTLVQ 404
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN---IPKNNIALNVK 476
++E L P N ++ LY+ WL G + + L+T Y + +P + +++
Sbjct: 405 QMEEHYSSLPVRLPETNLEVQRLYQDWLDGHDSPHAQQSLHTQYKDHTHLPAHITNPDIQ 464
Query: 477 W 477
W
Sbjct: 465 W 465
>gi|326930695|ref|XP_003211478.1| PREDICTED: LOW QUALITY PROTEIN: nuclear prelamin A recognition
factor-like [Meleagris gallopavo]
Length = 481
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 220/422 (52%), Gaps = 28/422 (6%)
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L +I L+DCLAC C+TS E + QQ+ +E +++ N +K K + +S+
Sbjct: 82 LANAKILLSDCLACDSCMTSEEGARVFQQNQKEFFRIL---NLNKKCDTSKHKVLAVSIC 138
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q + AKF+LS +LCGF K LGV V D IA FS++E + EF+ R+
Sbjct: 139 PQSLPYFAAKFSLSVNDAAKRLCGFLKSLGVHYVFDTTIAADFSILESQREFVQRYQRRS 198
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P+F S CPGW+ YAE+ + P+I KSPQQ+MGSL+K + A + + P
Sbjct: 199 QEEHALPMFASACPGWIRYAERVLTNLVTPHICTAKSPQQIMGSLVKGYFARQQNLSPEK 258
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
I+HV + PCYDKKLEA R DFY ++VDCV+T+ E+ ++ E ++++ +
Sbjct: 259 IFHVVVAPCYDKKLEALREDFYTALYNSQEVDCVLTSGEIVQIM--EQKNVSMKDVTEVA 316
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF- 355
+D HA ++L + + +K L+N D +E T
Sbjct: 317 VD-----------------SXXXXXXXXXKHAAKELFGVDVRSITYKALKNKDFQEVTLE 359
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G+ LRF A GFRNIQN++ KLK+ + Y F+E++ACP GCLNG Q + E K
Sbjct: 360 KDGETVLRFAAAYGFRNIQNMVLKLKKGKFLYHFVEVLACPGGCLNGKGQTQTEDGKPDK 419
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
++E + + P N ++ +Y+ WL G + K + L+T Y + + L++
Sbjct: 420 ALLSQMEDVYAAIPVRLPEANVYVQKMYQDWLEGMDSRKVQETLHTKYSAVNQTASNLDI 479
Query: 476 KW 477
KW
Sbjct: 480 KW 481
>gi|351706449|gb|EHB09368.1| Nuclear prelamin A recognition factor [Heterocephalus glaber]
Length = 506
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 165/506 (32%), Positives = 247/506 (48%), Gaps = 70/506 (13%)
Query: 34 PSGPRT-----GAKIRIQDDGAYIQETNGRE------EKLKKVEISLTDCLACSGCITSA 82
P G R GA +D G E +G KL +I L+DCLAC C+T+
Sbjct: 9 PRGQRAPEVSAGASREGEDKGVRAAEPSGVSVQKGEFHKLADAKIFLSDCLACDSCVTAE 68
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E ++QQ+ ++ +V+ N +K K +V+S+ Q + AK LS +
Sbjct: 69 EGAQLSQQNAKDFFRVL---NLNKKCDTSEHKVLVVSVCPQSLPYFAAKLNLSVTDASRR 125
Query: 143 LCGFFKRLGVDLVLDVGIAH-------------------------------C-------- 163
LCGF K LGV V D+ IA C
Sbjct: 126 LCGFLKSLGVHYVFDMAIAADFSILESQKEFVRRYHQHSDEQRALPMLTSACPGVHYVFD 185
Query: 164 ------FSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVK 212
FS++E + EF+ R+ P+ TS CPGWV YAE+ G + P++ K
Sbjct: 186 MAIAADFSILESQKEFVRRYHQHSDEQRALPMLTSACPGWVRYAERVLGHPVTPHLCTAK 245
Query: 213 SPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVIT 272
SPQQVMGSL+K + A++ + P I+HV + PCYDKKLEA + F G + DCV+T
Sbjct: 246 SPQQVMGSLVKDYFAKQQNLPPEKIFHVVVAPCYDKKLEALQEGFSTALPGAQGTDCVLT 305
Query: 273 AVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQL 332
+ E+ ++ + KD +D + + + +GTGS G+ +V HA ++L
Sbjct: 306 SGEITQMMEQSDLSV-----KDAAVDTLFRDAKEAVVRRHDGTGSDGHLAHVFRHAAKEL 360
Query: 333 CPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIE 391
+ + LRN D +E T G+V LRF A GFRN+QNL+ KL++ + PY F+E
Sbjct: 361 FNEHVEEITYCALRNKDFQEVTLEKNGEVLLRFAAAYGFRNVQNLVLKLRKGKFPYHFVE 420
Query: 392 IMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKS 451
++ACP GCLNG Q + E + K ++E I D+ P +A ++ LY+ WL G
Sbjct: 421 VLACPGGCLNGRGQAQTEHGHTDKFVLRQMEGIYADIPVQPPESSAHVQELYQEWLEGTD 480
Query: 452 TDKGKHMLNTSYHNIPKNNIALNVKW 477
+ K + L+TSY + + AL++KW
Sbjct: 481 SLKAQEALHTSYQSPERCTAALDMKW 506
>gi|409080606|gb|EKM80966.1| hypothetical protein AGABI1DRAFT_119505 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 591
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 203/611 (33%), Positives = 287/611 (46%), Gaps = 161/611 (26%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-----PI--EKPSGPRTGAKIRIQDDGAYIQ----- 53
FSG L LTDL+DFI PSQ CIKP+ P+ EK +G +I I G Y +
Sbjct: 3 FSGALTLTDLNDFITPSQACIKPVEQTNKPVQQEKDAGA-AATEIHIDGSGTYYEVAQDG 61
Query: 54 -ETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN 112
+ GR KL++ +ISL DCLACSGCITSAESVLIT QSH EV+ V+ S+ +
Sbjct: 62 GDMTGR--KLEQAQISLNDCLACSGCITSAESVLITLQSHVEVLSVL--------SNPTD 111
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKR--------LGVDLVLDVGIAHCF 164
+ ++S+A Q + SL A ++ + + F+R LG V D A
Sbjct: 112 ERIPIISIAPQSLASLAAAYSQHNSSELLTPREIFRRIRTFCTSILGFAYVFDTNFARHI 171
Query: 165 SLVELENEFLDR---FLSGGG------------PLFTSECPGWVCYAEKSHGEFILPYIS 209
SL E EF++R L+ G P+ S CPGW+CYAEK+H E +LP+I+
Sbjct: 172 SLNEHVKEFIERREQHLAKGDDDGLPRSPSETLPMLASACPGWICYAEKAHPE-MLPFIA 230
Query: 210 RVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDC 269
R KSPQQVMG+L+K + +LG P+ IYHV++MPCYDKKLEASR DF+++ RDVDC
Sbjct: 231 RTKSPQQVMGTLVKKWIGRRLGKQPNEIYHVSVMPCYDKKLEASRQDFFDDIFQTRDVDC 290
Query: 270 VITAVELEVLLAN---ELATTTLQEEKD-------GILDWPWDEHNPH----RMLLVNGT 315
V+T ELE+++ +L T++ Q D + D +P ++ +GT
Sbjct: 291 VVTTGELELMMKEFGWDLKTSS-QSPSDLTTSRSIPLKDLTSARRHPGIDLPELVTHSGT 349
Query: 316 GSGGYAHNVLSHAIRQLCPGESPV---VEFKPLRNPDIREATF----------TCGDVTL 362
SG Y ++L H SPV + K +RN D E G V
Sbjct: 350 SSGSYLPSILRHLTET-----SPVPLMLSVKTVRNSDYEEYVLRESAPSSSGDAVGKVIF 404
Query: 363 RFCIANGFRNIQNLIQKLKRKR-------------------------------------- 384
+ GFRN+QN+++K+ R+R
Sbjct: 405 KGAKCYGFRNLQNVVRKVGRERGVRVGSGAAGRLGAPGGAGKGVRRLRAVRKGQGGEGGA 464
Query: 385 -------LPYDFIEIMACPSGCLNGGAQIRNEK--------------------VASPK-- 415
YD++E+MACP GC+NGG Q++ AS K
Sbjct: 465 PGGDGEERKYDYVEVMACPGGCVNGGGQLKPPDGTSLDAEGYQRDWDGEGAIPSASAKWG 524
Query: 416 --------ETALELETILCDLAKSEPR-ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
E A +T D +S + + +E L++A+ G S KG + T Y +
Sbjct: 525 DKGWTKKVEEAYWRDTGRVDAERSADQVADGIVEELWEAY--GDSEKKG--LFRTEYRAV 580
Query: 467 PKNNIALNVKW 477
+ + L VKW
Sbjct: 581 ESDVVGLAVKW 591
>gi|432952174|ref|XP_004084989.1| PREDICTED: nuclear prelamin A recognition factor-like [Oryzias
latipes]
Length = 454
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 228/420 (54%), Gaps = 14/420 (3%)
Query: 53 QETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN 112
QE ++ + L+ CL+C GC++ ES+ I+QQS EEV +V+ N AS +
Sbjct: 31 QEEVNEQQSEAPAPLLLSACLSCEGCVSEQESLKISQQSLEEVEQVLALNKRCDASKH-- 88
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENE 172
+ +V S+ Q + KF + + KLCGF K +GV V D +A FS++E + E
Sbjct: 89 -RVLVASVCPQSLPFFAVKFGVDVPEAGQKLCGFLKSIGVQFVFDTTLAAGFSILETQKE 147
Query: 173 FLDRFLSG-----GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA 227
F+ R+ PLFTS CPGW+ YAE+ G + P+I +SPQQ+MG L+K
Sbjct: 148 FIQRYRRRHHDPHALPLFTSSCPGWIRYAERVLGSLVTPHICTARSPQQIMGCLVKDFFC 207
Query: 228 EKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATT 287
++ + P ++HV L PC+DKKLEA R +FY+ + RDVDCV+T+ E+ L+ +
Sbjct: 208 QQQKLSPEKVFHVVLAPCFDKKLEAVREEFYSSLMETRDVDCVLTSKEIYRLMEQRKVSV 267
Query: 288 TLQEEKDGI-LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR 346
EE D + LD E + +G GS G+ +V HA ++L + V +K LR
Sbjct: 268 ---EELDSVPLDQVLGEAADAALTRHDGRGSEGFLEHVFKHAAKELFGLDVQEVTYKTLR 324
Query: 347 NPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
N D +E T G+ L+F GFRNIQ L+ ++++ R+PY +E+++CP GCL+G Q
Sbjct: 325 NRDFQEVTLERDGETLLQFAAVYGFRNIQTLVHRMRKGRVPYQLVEVLSCPGGCLSGRGQ 384
Query: 406 IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
E + ++E + L P N L+ LY+ WL G+ + + +L+T Y +
Sbjct: 385 -SEEAGRVDRALVQQMEEVYSSLPVRLPELNPALKVLYQDWLQGQDSLQTSKLLHTEYRS 443
>gi|341895670|gb|EGT51605.1| hypothetical protein CAEBREN_28974 [Caenorhabditis brenneri]
Length = 460
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 169/482 (35%), Positives = 257/482 (53%), Gaps = 27/482 (5%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M S FSGV++L+++ DFI P+ +CI P+ + +++ I+ + +
Sbjct: 1 MEDSGFSGVVRLSNVSDFIAPNLDCIIPLETRTVEKKKEESQVNIRTKKKKEDVVPAKSD 60
Query: 61 KLKK-VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLS 119
+KK V+ISL DCLAC+GCITSAE+VL+ +QS +++ I +N+K V++
Sbjct: 61 DVKKSVKISLADCLACNGCITSAETVLVEEQSFGRLLEGI-----------QNSKLAVVT 109
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
++ Q +S K S V + FF R GV +LD A F+ L E L S
Sbjct: 110 ISPQTFVSFAVKLQKSTGDVATLISKFFHRHGVKYILDSSFARKFAH-SLAFEELHSTPS 168
Query: 180 GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
PL +S CPG+VCYAEKSHGE ++P IS+++SPQ + G+LIK +LA+K G+ P ++H
Sbjct: 169 TSRPLLSSACPGFVCYAEKSHGELLIPKISKIRSPQAISGALIKGYLAKKEGLSPCDVFH 228
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDW 299
+MPC+DKKLEASR F + R+ DCV++ EL + E ++++ D
Sbjct: 229 AAVMPCFDKKLEASREQFKVDGTEIRETDCVVSTAELLEEITKENPEGSIEDSTVFEGD- 287
Query: 300 PWDEHNPHRMLLVNGTG-SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--- 355
W H ++ + G SGGYA ++ + Q V++ L N ++ T
Sbjct: 288 EWMTHLSRGAVIGDAGGSSGGYADRIVRDFVHQ----NGGVIKTTKL-NKNMFSTTVESP 342
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G++ LR GFRN+QNL++K+K K+ D++EIMACP GC NGG QIR E + +
Sbjct: 343 ESGEILLRVAKVYGFRNVQNLVRKMKTKKEKTDYVEIMACPGGCANGGGQIRYETM-DER 401
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
E LE D K+ +E + W GK + L T Y + + N+A +
Sbjct: 402 EKRLERVEEEYDSLKAHDTLEDWVEKVRVDW--GKVDQDYRRHLFTDYKPV-ETNVAQAL 458
Query: 476 KW 477
KW
Sbjct: 459 KW 460
>gi|159470443|ref|XP_001693369.1| iron hydrogenase/prelamin A binding protein [Chlamydomonas
reinhardtii]
gi|158277627|gb|EDP03395.1| iron hydrogenase/prelamin A binding protein [Chlamydomonas
reinhardtii]
Length = 479
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 256/511 (50%), Gaps = 68/511 (13%)
Query: 2 ASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEK 61
A+ FS +++ DL+D+I PSQ+C+ + K++ + + G
Sbjct: 2 AAMEFSSTIRVADLNDYIAPSQDCVVAL----------NGKLKTVEVSSLNAPAPG---- 47
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
V++SL DCLACSGCITSAE+VL+ QQS +E + A + T +V++++
Sbjct: 48 -DPVKVSLHDCLACSGCITSAETVLLQQQSGDEFL----------AKLADPTLAVVVTVS 96
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR----- 176
Q +L A F LS +A+L G+ K LG V D+ A L+E EF+
Sbjct: 97 PQSRAALAAYFGLSPAATLARLAGWLKGLGAAAVWDLTTARDLVLLEEAAEFVGSSGRPA 156
Query: 177 --------FLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
G P+ S CPGWVCYAEK+HG ++PY+S +SPQ MG L+K+ +A
Sbjct: 157 AAVAGAVEEAPGPLPMMASACPGWVCYAEKTHGAKVIPYMSTTRSPQGAMGGLVKSLVAA 216
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEE---------LGYRDVDCVITAVELEVL 279
GV P+ +YHVT+MPCYDKKLEASR + ++EV
Sbjct: 217 AWGVSPAALYHVTVMPCYDKKLEASRDELTTTSDEAAAVAAGSVAVAAAGAGGGSDMEV- 275
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV 339
E+A +DG + P E + L + + SGGY+ V A R+L E P
Sbjct: 276 DGGEVAAAA----QDGGVLLPPSEDRLYG--LRDASSSGGYSDFVFRAAARELAGVELPA 329
Query: 340 --VEFKPLRNPDIREATFTC-----GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEI 392
+ ++ LRN D +E T G V LRF GFRNIQ L++++K R Y ++E+
Sbjct: 330 GPLPWRALRNADFQELTLEVPALGPGQV-LRFARVYGFRNIQTLLRQVKMGRCAYQYVEV 388
Query: 393 MACPSGCLNGGAQ--IRNEKVASPKETALELETILC--DLAKSEPRENATLEHLYKAWLG 448
MACPSGCLNGG Q R A P++ ++E D+A P +N + LY WLG
Sbjct: 389 MACPSGCLNGGGQPKPRPGLGAGPQQLLEQVEAAYAHEDVAARWPTDNPAVALLYSRWLG 448
Query: 449 GK-STDKGKHMLNTSYHNIPKN-NIALNVKW 477
G+ + + +L+TSY K N A+ W
Sbjct: 449 GRPGSAAARRLLHTSYREREKTVNTAMVANW 479
>gi|335297199|ref|XP_003131175.2| PREDICTED: nuclear prelamin A recognition factor isoform 1 [Sus
scrofa]
Length = 455
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 226/427 (52%), Gaps = 15/427 (3%)
Query: 57 GREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTI 116
G KL +I L+DCLAC C+++ E V + QQ+ ++ ++V+ N AS + + +
Sbjct: 38 GEFHKLADAKIFLSDCLACDSCVSAEEGVQVAQQNAKDFLRVLNLNKKCDASEH---RVL 94
Query: 117 VLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR 176
+S+ Q + AKF+LS +LCGF K LGV V D IA FS++E + EF+ R
Sbjct: 95 AVSVCPQSLPYFAAKFSLSVTDASRRLCGFLKSLGVHYVFDATIAADFSILESQKEFVRR 154
Query: 177 FLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
F P+ TS CPGWV YAE+ G + P++ +SPQQ+MGSL+K + A +
Sbjct: 155 FHQHSEEEPALPMLTSACPGWVRYAERVLGHPVTPHLCTARSPQQIMGSLVKDYFARRQD 214
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQE 291
+ I+HV + PCYD+KLEA + D G+R DCV+T+ E+ ++ +
Sbjct: 215 LSADRIFHVIVAPCYDRKLEALQEDVPTASPGFRGTDCVLTSGEIAQMMEQSDLSV---- 270
Query: 292 EKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR 351
+D LD + + + +G S G ++ HA ++L + + ++ LRN D +
Sbjct: 271 -RDAALDTLFGDVR-EEVRRHDGASSDGCLAHIFRHAAKELFDEDVGELTYRALRNRDFQ 328
Query: 352 EATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
E T G V LRF A GFRNIQN++ KLKR R PY F+E++AC GCLNG Q + E
Sbjct: 329 EVTLEKSGKVLLRFAAAYGFRNIQNVVLKLKRGRFPYHFVEVLACAGGCLNGRGQAQTED 388
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
+ + + + P +A ++ LY+ WL G + + L+T++ +
Sbjct: 389 GRADRALLQRMRGVHAAGPGRTPETSAHVQDLYREWLDGADAPRARGTLHTAHQGPGRPA 448
Query: 471 IALNVKW 477
++KW
Sbjct: 449 DGRDIKW 455
>gi|302849037|ref|XP_002956049.1| hypothetical protein VOLCADRAFT_66610 [Volvox carteri f.
nagariensis]
gi|300258554|gb|EFJ42789.1| hypothetical protein VOLCADRAFT_66610 [Volvox carteri f.
nagariensis]
Length = 417
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 234/427 (54%), Gaps = 36/427 (8%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+++L DCLACSGCITSAE+VL+ QQS +E + R + H T+V++++ Q
Sbjct: 7 QVTLHDCLACSGCITSAETVLLQQQSGDEFLS--RLADPHT--------TVVVTVSPQSR 56
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-----SG 180
+L A + L Q +A+L G+ K LGV V D+ A L+E EF++R++ +G
Sbjct: 57 TALAAYYGLCPSQALARLVGWLKWLGVRAVWDLTTARDLVLLEEAAEFMNRWVCMYVSAG 116
Query: 181 GGPLFTSECPG--WVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
P+ S CPG WVCYAEK+HG +LPY+S +SPQ MG L+K+ +A GV P +Y
Sbjct: 117 PLPVMGSSCPGTGWVCYAEKTHGTRVLPYLSTTRSPQGAMGGLVKSLVAAAWGVTPGSLY 176
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-------EVLLANELATTTLQE 291
HVT+MPCYDKKLEASR + EV++ + AT
Sbjct: 177 HVTIMPCYDKKLEASRDELTTTATTTTAAGTDAAGAGAAVGGPLPEVMVRH--ATAAPDP 234
Query: 292 EKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRNPD 349
G++ P D+ L +G+ SGGYA V A R+L E P + ++ RN D
Sbjct: 235 LLPGVV--PADD---QLYSLPHGSSSGGYADFVFRTAARELWGVEVPPGPLPWRTRRNAD 289
Query: 350 IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
++ G +L GFRNIQ L+Q+LKR R PY ++E+MACPSGCLNGG QI+
Sbjct: 290 LQPRVGAPGQ-SLVVARVYGFRNIQTLLQQLKRGRCPYHYVEVMACPSGCLNGGGQIKPG 348
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGK-STDKGKHMLNTSYHNIPK 468
+P++ +LE +L D+A P +N + LY +WLGG+ + +L+T++ K
Sbjct: 349 PGVTPQQLIEQLE-LLYDVAARSPADNPAVAALYGSWLGGRPGAPPARQLLHTTFREREK 407
Query: 469 NNIALNV 475
A V
Sbjct: 408 TVTAATV 414
>gi|345806726|ref|XP_003435490.1| PREDICTED: nuclear prelamin A recognition factor isoform 1 [Canis
lupus familiaris]
Length = 408
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 201/370 (54%), Gaps = 11/370 (2%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
K + +S+ Q + AKF LS +LCGF K LGV V D IA FS++E + EF
Sbjct: 44 KVLAVSVCPQSLPYFAAKFRLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEF 103
Query: 174 LDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
+ R+ P+ TS CPGWV YAE+ G + P++ KSPQQ+MGSL+K + A
Sbjct: 104 VRRYQQHSEEEPALPMLTSACPGWVRYAERVLGHPVTPHLCTAKSPQQIMGSLVKDYFAR 163
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTT 288
+ + P I+HV + PCYDKKLEA R DF G+R DCV+T+ E+ ++ T
Sbjct: 164 QQNLSPDKIFHVIVAPCYDKKLEALREDFPTAPHGFRSADCVLTSGEIAQIMEQSDLTV- 222
Query: 289 LQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNP 348
KD +D + + +G S GY +V HA +QL + V ++ LRN
Sbjct: 223 ----KDAAVDTVFGGLKEEEVRRHDGASSDGYLAHVFRHAAKQLFDEDVGEVTYRTLRNK 278
Query: 349 DIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
D +E T G+V LRF A GFRNIQN++ KLK+ R PY F+E++AC GCLNG Q +
Sbjct: 279 DFQEVTLEKNGEVLLRFAAAYGFRNIQNVVLKLKKGRFPYHFVEVLACAGGCLNGRGQAQ 338
Query: 408 NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
E + K ++E I D+ P +A ++ LY+ WL G + + + L+T Y
Sbjct: 339 TEDGRADKALLRQMEGIYADIPVRPPESSAHVQELYQEWLDGADSPRAQEALHTKYQGPG 398
Query: 468 KNNIALNVKW 477
++ ++KW
Sbjct: 399 LPALSRDIKW 408
>gi|215695478|dbj|BAG90639.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 394
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/390 (41%), Positives = 215/390 (55%), Gaps = 39/390 (10%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
K +++S++ Q SL A F LS QV KL FK +GV V D + SL+E +EF
Sbjct: 18 KAVIVSVSPQSRASLAAFFGLSQSQVFRKLTALFKSMGVKAVYDTSSSRDLSLIEACSEF 77
Query: 174 LDRF----LSGGG------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK 223
+ R+ LS G P+ +S CPGW+CYAEK+ G FILPYIS VKSPQQ +G+ IK
Sbjct: 78 VTRYHQNQLSSGKEAGKNLPMLSSACPGWICYAEKTLGSFILPYISAVKSPQQAIGAAIK 137
Query: 224 THLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN--EELGYRDVDCVITAVE-LEVLL 280
H+ KLG+ P +YHVT+MPCYDKKLEA R DF E+ +VD V+T E L+++
Sbjct: 138 HHMVGKLGLKPHDVYHVTVMPCYDKKLEAVRDDFVFSVEDKDVTEVDSVLTTGEVLDLIQ 197
Query: 281 ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG----------GYAHNVLSHAIR 330
+ + TL+E +P LL N G GYA V HA
Sbjct: 198 SRSVDFKTLEE-------------SPMDRLLTNVDDDGQLYGVSGGSGGYAETVFRHAAH 244
Query: 331 QLCPGE-SPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYD 388
L + V+F+ LRN D RE T G L+F + GFRN+QN+I+K+K + Y
Sbjct: 245 VLFDRKIEGSVDFRILRNSDFREVTLEVEGKPVLKFALCYGFRNLQNIIRKIKMGKCEYH 304
Query: 389 FIEIMACPSGCLNGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWL 447
FIE+MACPSGCLNGG QI+ K S K+ LE + + D++ S P EN + LY WL
Sbjct: 305 FIEVMACPSGCLNGGGQIKPAKGQSAKDLIQLLEDVYIQDVSVSNPFENPIAKRLYDEWL 364
Query: 448 GGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
G ++ K L+T YH + K+ + W
Sbjct: 365 GQPGSENAKKYLHTKYHPVVKSVASQLQNW 394
>gi|84452151|ref|NP_001033707.1| nuclear prelamin A recognition factor isoform c [Homo sapiens]
gi|119610200|gb|EAW89794.1| hCG30379, isoform CRA_d [Homo sapiens]
Length = 397
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 225/406 (55%), Gaps = 16/406 (3%)
Query: 79 ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQ 138
+T+ E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS
Sbjct: 1 MTAEEGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTD 57
Query: 139 VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWV 193
+LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV
Sbjct: 58 ASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWV 117
Query: 194 CYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEAS 253
YAE+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA
Sbjct: 118 RYAERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEAL 177
Query: 254 RADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLV 312
+ G R DCV+T+ E+ +++ +L+ +D +D + + ++
Sbjct: 178 QESLPPALHGSRGADCVLTSGEIAQIMEQGDLSV------RDAAVDTLFGDLKEDKVTRH 231
Query: 313 NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFR 371
+G S G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A GFR
Sbjct: 232 DGASSDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFR 291
Query: 372 NIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKS 431
NIQN+I KLK+ + P+ F+E++AC GCLNG Q + + K ++E I D+
Sbjct: 292 NIQNMILKLKKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVR 351
Query: 432 EPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
P +A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 352 RPESSAHVQELYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW 397
>gi|384495843|gb|EIE86334.1| hypothetical protein RO3G_11045 [Rhizopus delemar RA 99-880]
Length = 437
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 241/450 (53%), Gaps = 61/450 (13%)
Query: 73 LACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKF 132
L +GC+TSAESVLI+ QS EE K++ + + T V+S++ Q SL AK+
Sbjct: 4 LKLNGCVTSAESVLISMQSLEEFYKILEQ---------KTYTTTVISISPQSRASLAAKY 54
Query: 133 ALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRF-------------- 177
L+ QV +L FFK LG+ V D SLVE EF+DRF
Sbjct: 55 QLTPIQVHKRLTYFFKHILGIHHVFDTAFTQDLSLVESAREFMDRFKFYMANGGEEIEKV 114
Query: 178 --------------LSGGG---------PLFTSECPGWVCYAEKSHGEFILPYISRVKSP 214
GGG P+ S CPGWVCYAEK+HGE ILPYIS KSP
Sbjct: 115 AQQQQQEEGPSVRSRRGGGAKAKKIEGMPMLASSCPGWVCYAEKTHGE-ILPYISTTKSP 173
Query: 215 QQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAV 274
QQ+MGSL+K +LA K + IYHVT+MPCYDKKLEASR DF +++ RDVDCV+T
Sbjct: 174 QQMMGSLVKNYLANKTNTSANQIYHVTVMPCYDKKLEASRPDFQIDDI--RDVDCVLTTS 231
Query: 275 ELEVLLAN----ELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIR 330
E++ +L + ++ +++ + + P E + + V G+ SGG +++ A R
Sbjct: 232 EIDQMLQSHDFLQMPEAPVEDMFNKVGVDP--ETSQETVFGVPGSSSGGSLEYIMATAAR 289
Query: 331 QLCPGESPVVEFKPLRNPDIREATFTCGD--VTLRFCIANGFRNIQNLIQKLKRKRLPYD 388
+L + V K +N D+ E + D LRF A GFRNIQNL++K+K+ + Y
Sbjct: 290 ELFGASTDHVTMKVGKNADVCEYSLMSDDGRPLLRFASAYGFRNIQNLVRKIKQGKCIYH 349
Query: 389 FIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLG 448
++E+MACP GC NGG QI V + KE ++E+I P EN ++ +Y W+
Sbjct: 350 YVEVMACPGGCANGGGQIIPVNV-NAKEWLNQVESIYRSAKGIWPEENEMIKTIYNEWI- 407
Query: 449 GKSTDKGKHMLNTSYHNIPKN-NIALNVKW 477
G K + +L+T YH + ++ L KW
Sbjct: 408 GDDMAKRQLLLHTQYHAVTQSFQNPLATKW 437
>gi|193787011|dbj|BAG51834.1| unnamed protein product [Homo sapiens]
Length = 397
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 224/406 (55%), Gaps = 16/406 (3%)
Query: 79 ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQ 138
+T+ E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS
Sbjct: 1 MTAEEGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTD 57
Query: 139 VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWV 193
+LCGF K LGV V D IA FS++E + EF+ + P+ TS CPGWV
Sbjct: 58 ASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEFVRLYRQHSEEERTLPMLTSACPGWV 117
Query: 194 CYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEAS 253
YAE+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA
Sbjct: 118 RYAERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEAL 177
Query: 254 RADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLV 312
+ G R DCV+T+ E+ +++ +L+ +D +D + + ++
Sbjct: 178 QESLPPALHGSRGADCVLTSGEIAQIMEQGDLSV------RDAAVDTLFGDLKEDKVTRH 231
Query: 313 NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFR 371
+G S G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A GFR
Sbjct: 232 DGASSDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFR 291
Query: 372 NIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKS 431
NIQN+I KLK+ + P+ F+E++AC GCLNG Q + + K ++E I D+
Sbjct: 292 NIQNMILKLKKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVR 351
Query: 432 EPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
P +A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 352 RPESSAHVQELYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW 397
>gi|259511472|sp|A8XZU0.2|NARF_CAEBR RecName: Full=Probable cytosolic Fe-S cluster assembly factor oxy-4
Length = 439
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 256/481 (53%), Gaps = 46/481 (9%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M S FSGV++L+++ DFI P+ +CI P+ ++ I+ +E +E+
Sbjct: 1 MEDSGFSGVVRLSNVSDFIAPNLDCIIPLETRTVEKKNEEPQVNIRAKKTKNEENKPKED 60
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
K K V+ISL DCLAC+GCITSAE+VL+ +QS +++ IR N+K V+++
Sbjct: 61 K-KSVKISLADCLACNGCITSAETVLVEEQSFGRLLEGIR-----------NSKMAVITI 108
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q + SL K + E + + FF+R GV VLD A F+ L E L S
Sbjct: 109 SPQTITSLAVKLEKTPEDLAKLIASFFRRHGVKYVLDSSFARQFAH-SLAYEELLLTPST 167
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
PL +S CPG+VCYAEKSHGE ++P IS+++SPQ + G+++K +LA+K G+ P ++H
Sbjct: 168 SRPLLSSACPGFVCYAEKSHGELLIPKISKIRSPQAISGAIVKGYLAKKEGLSPCDVFHA 227
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
+MPC+DKKLE R + ++ E TT+L GI+
Sbjct: 228 AVMPCFDKKLE-HRGNSLGTAELLEELVKEEGVAEDVEEEEENNWTTSLSR---GII--- 280
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF---TC 357
+ +G SGGYA + +R +V+ L N ++ T T
Sbjct: 281 ---------IGEDGGASGGYADRI----VRDFVAQNGGIVKTSKL-NKNMFSTTVESTTT 326
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
G++ LR GFRN+QNL++K+K K+ D++E+MACP GC NGG Q+R E + ++
Sbjct: 327 GEIVLRVAKVYGFRNVQNLVRKMKTKKEKTDYVEVMACPGGCANGGGQVRYETMDEREKR 386
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKG-KHMLNTSYHNIPKNNIALNVK 476
++E +L ++ PR N+ E + + W K D K++L T Y + + N+A +K
Sbjct: 387 LAQVE----ELYEALPRGNSWEESVREEW---KRLDTNYKNLLFTDYKPV-ETNVAQTLK 438
Query: 477 W 477
W
Sbjct: 439 W 439
>gi|47215781|emb|CAG02577.1| unnamed protein product [Tetraodon nigroviridis]
Length = 440
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 226/434 (52%), Gaps = 42/434 (9%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++ L+ CL+C GC++ E+V I+QQS EEV +V+ N AS + K +V S+ Q +
Sbjct: 8 QLLLSACLSCDGCVSEDENVKISQQSLEEVKRVLALNKKCDASKH---KVLVASICPQSL 64
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-----SG 180
KF + + KLCGF K LGV V D +A FS++E + EF+ R+ S
Sbjct: 65 PFFAVKFGVQVTEAAHKLCGFLKGLGVHYVFDTSLAAGFSILECQKEFVQRYRRKHHDSQ 124
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA-EKLGVHPSHIYH 239
P+FTS CPGW+ YAE+ G + P+I +SPQQ+MG L+K + ++ + P IYH
Sbjct: 125 ALPMFTSSCPGWIRYAERVLGTLVTPHICIARSPQQIMGCLVKDFFSKQQQKLSPEKIYH 184
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI-LD 298
+ + PC+DKKLEA R +FYN L RDVDCV+T+ E+ L+ ++ D + LD
Sbjct: 185 MLVAPCFDKKLEAVREEFYNSLLETRDVDCVLTSGEIYDLMGQRKVAV---DKLDSVPLD 241
Query: 299 WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC- 357
E ++ G GS G+ +V HA ++L + + +K LRN D +E T
Sbjct: 242 HVLGESGDAALMRHEGRGSEGFLEHVFKHAAKELFGQDVHEITYKNLRNRDFQEVTLERD 301
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP--------------------- 396
G+ L+F GFRNIQ L+ ++++ R+PY +E+++CP
Sbjct: 302 GETLLQFAAVYGFRNIQTLVHRMRKGRVPYQLVEVLSCPGGKAATCFRRRSKWNFRLLLR 361
Query: 397 -------SGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGG 449
SGCL+G Q +E+ K ++E + L P N L LY WL G
Sbjct: 362 DTGLRFHSGCLSGRGQAESEEGRLDKNLIQQMEEVYSSLPVRLPEVNPALHVLYHDWLQG 421
Query: 450 KSTDKGKHMLNTSY 463
+ + + +L+T Y
Sbjct: 422 QDSPQASILLHTQY 435
>gi|50545922|ref|XP_500499.1| YALI0B04532p [Yarrowia lipolytica]
gi|74635710|sp|Q6CFR3.1|NAR1_YARLI RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|49646365|emb|CAG82726.1| YALI0B04532p [Yarrowia lipolytica CLIB122]
Length = 491
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 258/506 (50%), Gaps = 49/506 (9%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEKLKK 64
S +L DL+DFI P CIKPI ++K + A+I I G ++ +G +++L+
Sbjct: 1 MSSILSADDLNDFISPGAVCIKPIKVDKTT---ENAEIEIGAQGQALEVGIDGTQKELEP 57
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
++SL+DCLACSGCITSAESVL+ QSH +++ +++ + S E + V S++ Q
Sbjct: 58 AQLSLSDCLACSGCITSAESVLVALQSHTQLLDELKKEA--ELPSGEK-RIFVCSVSHQA 114
Query: 125 VLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGP 183
S A F +S E AKL LG D V+ +G+ SL+ E S P
Sbjct: 115 RASFAAAFGVSVEVADAKLHSLLLDTLGFDYVVGMGVGREISLIHSAQEVEK---STQKP 171
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ + CPGWVCY EK+H ++PY+S VKSPQQ+ GSL+K + + V PS +YHV++M
Sbjct: 172 VMAASCPGWVCYVEKTH-PHVIPYLSSVKSPQQICGSLLKKVICDTRRVKPSQVYHVSVM 230
Query: 244 PCYDKKLEASRADFYNEELG----YRDVDCVITAVE-LEVLLANELATTTLQEEKDGILD 298
PC+DKKLEASR +F EE G RDVDCVIT E +++L +++ L E L
Sbjct: 231 PCFDKKLEASRDEFSVEEAGQEEKIRDVDCVITTKEVVQLLTEKDMSFGGLPEIDKSRLY 290
Query: 299 WPWDEHNPHRMLLVN--GTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPDIREATF 355
E P N G+ SGGY H+VL+ + P E+ V+ +N D+ E +
Sbjct: 291 TSVPETWPAERDWANHVGSSSGGYLHHVLTALRLRHDPLETRTRVDASMGKNQDVMEYSV 350
Query: 356 T---CGDVTLRFCIANGFRNIQNLIQKLKRKR---------------------LPYDFIE 391
G+ GFRNIQNL++KLK R Y +IE
Sbjct: 351 IDTETGETVASAAQVYGFRNIQNLVRKLKPSRGKGKVVSARKSTKTVSAALNPSTYSYIE 410
Query: 392 IMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKS 451
+MACP GC+NGG Q+ + + +E E E + + SE ++ K W G
Sbjct: 411 VMACPGGCINGGGQVGAPEGVAAREWKDETEKMYNSIP-SEAVSEEVVDWATKVW-GPHD 468
Query: 452 TDKGKHMLNTSYHNIPKNNIALNVKW 477
DK ++ Y + K + L W
Sbjct: 469 EDK---LVTAHYQEVEKVDQGLASTW 491
>gi|390471046|ref|XP_003734423.1| PREDICTED: LOW QUALITY PROTEIN: cytosolic Fe-S cluster assembly
factor NARFL [Callithrix jacchus]
Length = 367
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 178/286 (62%), Gaps = 11/286 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
+S FSG LQLTDL+DFIGPSQECIKP+ ++K G AKIRI+DDG+Y Q R +
Sbjct: 2 ASPFSGALQLTDLNDFIGPSQECIKPVNVDKRLGSGV-AKIRIEDDGSYFQVNQVRHRRP 60
Query: 63 K---KVEISLTDCLACSGCITSAES--VLITQQSHEEVMKVIRENNAHKASSNENTKTIV 117
+ L CS C+TS+ S L+ Q ++ + + A + ++ + +V
Sbjct: 61 LHGLTARPTXNTFLCCSNCVTSSSSDLSLVKSQHRKQRLPL-----ALQVAAPGQQRLVV 115
Query: 118 LSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF 177
+S++ Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 116 VSVSPQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRNFSLLESQREFVRRF 175
Query: 178 LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P+ S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+K A++ V P +
Sbjct: 176 RGQALPVLASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLVKDFFAQQQHVTPDKV 235
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE 283
YHVT+MPCYDKKLEASR DF+N+ RDVDCV+T E+ LL E
Sbjct: 236 YHVTVMPCYDKKLEASRPDFFNQAHQTRDVDCVLTTGEVLTLLEEE 281
>gi|213405865|ref|XP_002173704.1| iron hydrogenase [Schizosaccharomyces japonicus yFS275]
gi|259511272|sp|B6K2N0.1|NAR1_SCHJY RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1 homolog;
AltName: Full=Nuclear architecture-related protein 1
homolog
gi|212001751|gb|EEB07411.1| iron hydrogenase [Schizosaccharomyces japonicus yFS275]
Length = 515
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 263/537 (48%), Gaps = 94/537 (17%)
Query: 10 LQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAY-IQETNGREEKLKKVEIS 68
L DL+D++ P C+KP+ ++K + I++ + Y + + G E+L IS
Sbjct: 4 LSAEDLNDYLNPGVACVKPVKVQKKQDNQQN--IKVNGESYYEVTKDTGEVEELGIASIS 61
Query: 69 LTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
L DCLACSGCITSAESVLI QS+ EV+K + NA +A +L ++ Q SL
Sbjct: 62 LNDCLACSGCITSAESVLINLQSYHEVLKFV---NAKEADD-----FFILQMSPQARASL 113
Query: 129 GAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG----- 182
A + LS ++V + F L ++V+D G + SL + EF +++
Sbjct: 114 AAYYNLSVQEVQLWIQSVFTNELKFNVVVDTGFSREISLRQAAIEFCQSWVAANAAKTVY 173
Query: 183 ------------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
P+ +S CPGW+CY EK+H I P+IS V+SPQQV G L+K + +L
Sbjct: 174 NSKSGEVAPKPLPVLSSSCPGWICYVEKTHSSLI-PHISTVRSPQQVAGRLLKDWFSYQL 232
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-------- 282
G+ I+ ++LMPC+DKKLEASR DF NE++ RDVDCVIT EL LL
Sbjct: 233 GISRKKIWVLSLMPCFDKKLEASRNDFVNEQV--RDVDCVITPKELVELLKTKNISPQSM 290
Query: 283 ELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEF 342
+L + ++ E+ + W + P + NG+ SGGY H +++ A + L
Sbjct: 291 DLDSLSISEQTPCLPSW----YEPVQFEQQNGSSSGGYLHYIMTFAAKALFDINDLTNRI 346
Query: 343 K-PLRNPDIREATFT---CGDVTLRFCIANGFRNIQNLIQKLKRKRLP------------ 386
+N D+ E T G+ LR GFRNIQNL++ + RK P
Sbjct: 347 NVSQKNADMIEYELTSPDTGETLLRMATCYGFRNIQNLVRNVGRKSAPRRGRVLLKRMKN 406
Query: 387 -------------YDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKS-- 431
D++E+MACP GC+NGG Q+ P E++ + I + +
Sbjct: 407 MSTSPSTGTGKQKLDYVEVMACPGGCINGGGQL------PPPESSADFSGISREWMRQVE 460
Query: 432 ----EPR----ENATLEHLYKAWLGGKSTDKGKHMLNTSYH---NIPKNNIALNVKW 477
+P +NA ++ + WL S + +L+T YH N +N +AL W
Sbjct: 461 AHYFQPGVRQVDNAAVDAAVEHWLPSYSLQQS--ILHTKYHAVQNDTENPVALANTW 515
>gi|410928066|ref|XP_003977422.1| PREDICTED: nuclear prelamin A recognition factor-like [Takifugu
rubripes]
Length = 460
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 215/405 (53%), Gaps = 13/405 (3%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++ L+ CL+C GC++ E+V I+QQS EEV V+ N AS K +V S+ Q +
Sbjct: 47 QLLLSACLSCDGCLSDDENVKISQQSLEEVKHVLALNKKCDAS---KYKVLVASICPQSL 103
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-----SG 180
KF + + KLC F K GV V D +A FS++E + EF+ R+ S
Sbjct: 104 PFFAVKFGMEVTEAAHKLCSFLKSAGVHYVFDTNLASGFSILECQKEFIQRYRRKHHDSH 163
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+FTS CPGW+ Y+E+ G + P+I +SPQQ+MG L+K ++ + P IYH+
Sbjct: 164 ALPMFTSSCPGWIRYSERVLGSLVTPHICTARSPQQIMGCLVKDFFCKQQKLSPDKIYHM 223
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI-LDW 299
+ PC+DKKLEA R DFYN L RDVDCV+T+ E+ L+ + +E D + LD
Sbjct: 224 LVAPCFDKKLEAVREDFYNSLLEARDVDCVLTSGEIFGLMEQRRVSV---DELDSVPLDH 280
Query: 300 PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCG 358
+ ++ G S G+ +V +A ++L + + +K RN D +E T G
Sbjct: 281 VLGDSGDAVLMRHEGRVSEGFLEHVFKYAAKELFGLDVHEITYKNHRNRDFQEVTLERDG 340
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+ L+F GFRNIQ L+ ++++ R+PY +E+++CP GC++G Q K
Sbjct: 341 ETLLQFAAVYGFRNIQTLVHRMRKGRVPYQLVEVLSCPGGCISGRGQAETMAGRLDKNLI 400
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
++E + L P L LY WL G+ + + +L+T Y
Sbjct: 401 QQMEEVYSSLPVHLPEVTPALHTLYHDWLQGQDSPQANMLLHTQY 445
>gi|428162681|gb|EKX31801.1| hypothetical protein GUITHDRAFT_149054 [Guillardia theta CCMP2712]
Length = 485
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 175/471 (37%), Positives = 250/471 (53%), Gaps = 70/471 (14%)
Query: 33 KPSGPRTGAKIRIQDDGAYIQ-ETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQS 91
K SG I+++++G Y + +G + +LK +I+L DCLACSGCITSAESVLITQQS
Sbjct: 13 KESGKGGTLTIQLEENGTYSEVHGDGSKVQLKPAKITLNDCLACSGCITSAESVLITQQS 72
Query: 92 HEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLG 151
+E + V+ EN N IV+S++ Q S+ ++ +S +A++ FK+LG
Sbjct: 73 VDEFLSVV-ENKL-------NDIKIVVSVSPQAWASVATQYNISGPSALARISTVFKQLG 124
Query: 152 V-------DLVLDVGIAHCFSLVELENEFLDRFLS-GGGPLFTSECPGWVCYAEKSHGEF 203
VLD+ + SLVE EF+ R + P+ S CPGWVCYAEK+
Sbjct: 125 AISVSSMNVAVLDISLFRDLSLVESCQEFVHRLTAERKTPVIASACPGWVCYAEKTQHS- 183
Query: 204 ILPYISRVKSPQQV--MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEE 261
LP++S VKSPQQ+ G+L+K A +LGV PS IYHV LMPC+DKKLEASR DF ++
Sbjct: 184 ALPFLSSVKSPQQISAAGTLVKQMFARRLGVKPSSIYHVCLMPCFDKKLEASRDDFIEQD 243
Query: 262 LGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG----S 317
R+VD V+T+ E+ LLA + E ++G ++ + E + + N G S
Sbjct: 244 SNSREVDLVLTSAEILDLLARK--GINFLEVQEGSIENVFGETMSQQAVTNNLFGVHGSS 301
Query: 318 GGYAHNVLSHAIRQLCPGESPVVE------------------------------------ 341
G +A V HA RQ+ + V E
Sbjct: 302 GNFAKEVFVHAARQIFGKDVRVTEASDDVEMQIEDPSSSSSSSSSSSSSSSSSSPPINCV 361
Query: 342 FKPLRNPDIRE-ATFTCGDVT---LRFCIANGFRNIQNLIQKLK-RKRLPYDFIEIMACP 396
+K +RN D E F D L+F GFRNIQN+I+++K K Y +IE+MACP
Sbjct: 362 WKQVRNSDFHELVLFDQRDNKTPLLKFARCYGFRNIQNIIRQIKSSKGCAYHYIEVMACP 421
Query: 397 SGCLNGGAQIRNEKVA--SPKETALEL-ETILCDLAKSEPRENATLEHLYK 444
SGC+NGG QIR ++ +PKE L + ET ++ P EN ++ +Y+
Sbjct: 422 SGCVNGGGQIRPDESTKEAPKERLLRVQETFRNGQSERPPHENPDVKRIYQ 472
>gi|260946019|ref|XP_002617307.1| hypothetical protein CLUG_02751 [Clavispora lusitaniae ATCC 42720]
gi|238849161|gb|EEQ38625.1| hypothetical protein CLUG_02751 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 257/541 (47%), Gaps = 83/541 (15%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI----PIEKPSGPRTGAKIRIQDDGAYIQETNGREEK 61
S +L DL+DFI P CI+P+ PI++ G+++ +D E++
Sbjct: 1 MSAILSADDLNDFISPGLACIQPVEKLPPIKEGKAKPPGSELGEAEDPEVSIESD--HST 58
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
LK+ +ISL DCLACSGCITSAE VL+ Q SHE++ V+++N V S++
Sbjct: 59 LKQAQISLADCLACSGCITSAEEVLVAQHSHEQLRSVLKKNE----------HIFVASIS 108
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL + + + FF+RLG V+ + S+V+ L +
Sbjct: 109 HQTRASLAHAYGRPVSDMDKLIVAFFRRLGFKYVVGTAVGRKLSMVQEAQRILREKDTNS 168
Query: 182 --GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
GP+ +S CPGWV YAEK+H +LPY+S VKSPQQ+ G ++KT AE+L V IYH
Sbjct: 169 LKGPVLSSVCPGWVLYAEKTH-PHVLPYMSPVKSPQQITGCILKTLSAEELAVPREKIYH 227
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL------------EVLLANELATT 287
V +MPC+DKKLEA+R + +E L DVDCVITA EL E+ +++ +
Sbjct: 228 VAVMPCFDKKLEAARPE-ADESLSGPDVDCVITAKELVSLAEAMGHSIVEISESDDKKNS 286
Query: 288 TLQEEKDGILDWPWDEH--------NPHRMLLV-------NGTGSGGYAHNVLSHAIRQL 332
L+ E+ ++D + P R +G+ SGG+AHN L A +
Sbjct: 287 KLKSEQGDMVDCNSKDDPSSLFRSCAPSRFPFAELSWANDSGSESGGWAHNYLRLAQQHF 346
Query: 333 C---PGESPVVEFKPL----RNPDIREATFTCGDVTL-RFCIANGFRNIQNLIQKLKRKR 384
P +F RN D+ E T G TL + NGFRNIQNL+++LK +
Sbjct: 347 ISKNPDTYQAADFSIACVGGRNSDVYEWRLTHGGSTLASAAVVNGFRNIQNLVRRLKTSK 406
Query: 385 LPY-----------------------DFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
P D++EIMACP GC+NGG QI + KE E+
Sbjct: 407 TPLVRRRRKRTEAEESAEESADPARCDYVEIMACPGGCINGGGQISAPQPTQEKEWLTEV 466
Query: 422 ETILCDLAKSEPRENATL-EHLYKAWLGGKSTDKGKHMLNTSYHNIPK----NNIALNVK 476
D+ + L + L A + + + T +H + K N + L K
Sbjct: 467 RAAYADINTVDLVSTPELIQRLVDASKKFEQDVSPQRLFQTQFHEVEKPTDPNAVLLGAK 526
Query: 477 W 477
W
Sbjct: 527 W 527
>gi|149055127|gb|EDM06944.1| rCG33233 [Rattus norvegicus]
Length = 408
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 206/371 (55%), Gaps = 13/371 (3%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
K +V+S+ Q + AKF LS +LCGF K LGV V D IA FS++E + EF
Sbjct: 44 KVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEF 103
Query: 174 LDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
+ R+ P+ TS CPGWV YAE+ G I+PY+ KSPQQVMGSL+K + A
Sbjct: 104 VRRYHQHSEEQRELPMLTSACPGWVRYAERVLGRPIIPYLCTAKSPQQVMGSLVKDYFAR 163
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATT 287
+ + P I+H+ + PCYDKKLEA R G R DCV+T+ E+ +++ ++L+
Sbjct: 164 QQSLAPEKIFHIVVAPCYDKKLEALREGLSPTLNGARGTDCVLTSGEIAQIMEQSDLSV- 222
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
KD +D + + + +G S G+ +V HA ++L + ++ LRN
Sbjct: 223 -----KDIAVDTLFGDVKEMAVRRHDGVSSDGHLAHVFRHAAKELFGEHVEEITYRALRN 277
Query: 348 PDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI 406
D E T G+V LRF A GFRNIQN+I KLK+ + PY F+E++ACP GCLNG Q
Sbjct: 278 KDFHEVTLEKNGEVLLRFAAAYGFRNIQNMIMKLKKGKFPYHFVEVLACPRGCLNGRGQA 337
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
+ E + + ++E I + P + ++ LY+ WL G + K + +L+TSY ++
Sbjct: 338 QTEDGHTDRALLQQMEGIYSGIPVWPPESSTHVQELYQEWLEGTESPKVQEVLHTSYQSL 397
Query: 467 PKNNIALNVKW 477
+L++KW
Sbjct: 398 EPCTDSLDIKW 408
>gi|389741735|gb|EIM82923.1| iron hydrogenase [Stereum hirsutum FP-91666 SS1]
Length = 690
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 193/532 (36%), Positives = 253/532 (47%), Gaps = 125/532 (23%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-----PI-EKPSGPRTGAKIRIQDDGAYIQET---- 55
FSG L LTDL+D+I PSQ CIKP+ PI E P +IR+ DG Y + +
Sbjct: 3 FSGALTLTDLNDYITPSQACIKPVEQKNTPITEAPQPGAAATEIRVDSDGGYYEVSKSQV 62
Query: 56 ----------NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAH 105
+G +KL+ EISL DCLACSGCITSAESVLIT QSH EV+ + N
Sbjct: 63 PDVEMASTSGSGSGKKLETAEISLNDCLACSGCITSAESVLITLQSHTEVLNFLSSNAPS 122
Query: 106 KASSNENTKTIVLSLAIQPVLSLGAKFA------LSHEQVVAKLCGF-FKRLGVDLVLDV 158
+ S+ K V+S++ Q V SL A + +S + + ++ F LG V D
Sbjct: 123 SSPSH---KLPVVSISPQSVASLAASISSAQATEVSLYETLIRIEHFCVSTLGFAHVFDT 179
Query: 159 GIAHCFSLVELENEFLDRF----LSGGG-----PLFTSECPGWVCYAEKSHGEFILPYIS 209
A SL+E EF DR SG G P+ S CPGWVCYAEK+H E +LP+IS
Sbjct: 180 TFARHLSLMEHVREFHDRKQAADASGTGEGGQIPMLASACPGWVCYAEKTHAE-MLPFIS 238
Query: 210 RVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDC 269
R KSPQQVMG+++K LA + G P IYHVT+MPCYDKKLEASR DFYN+ RDVDC
Sbjct: 239 RTKSPQQVMGTIVKEWLAPQWGKKPDEIYHVTVMPCYDKKLEASRQDFYNDIYQTRDVDC 298
Query: 270 VITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVL---- 325
V+T EL++L+ E E R+L G+ SG Y H +L
Sbjct: 299 VLTTGELQLLM-QEKGFDLSMPVPSSSSSPSPSEPLLPRLLQHPGSSSGSYLHTILLDIA 357
Query: 326 -----------------SHAIRQLCPGES--PV------VEFKPLRNPDIREATFT---C 357
+ A P ES P +E K +R D E T
Sbjct: 358 STYPSSKSSSTHPQISSASASISPVPSESVGPTPSSLLHLEAKTIRTSDYEEYILTDTRT 417
Query: 358 GDVTLRFCIANGFRNIQNLIQKLK--------------------------RKRL------ 385
++ + GFRN+QN+++K+ R R+
Sbjct: 418 SEIIFKAARCYGFRNLQNVVRKVAKSAGVQSGKGAAGRLGARKAASGAGVRARVKKRAGA 477
Query: 386 -------------------PYDFIEIMACPSGCLNGGAQIR-NEKVASPKET 417
YD++E+MACP GC+NGG Q+R +E +P T
Sbjct: 478 AGAGAGLSREGDGVVAADRAYDYVEVMACPGGCVNGGGQLRPSEAFLTPSST 529
>gi|402592057|gb|EJW85986.1| hypothetical protein WUBG_03101 [Wuchereria bancrofti]
Length = 449
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 238/416 (57%), Gaps = 33/416 (7%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
S FSG+++++++ DFI PSQ CI P+ ++ +IR++ + + +K
Sbjct: 7 SGFSGIIKISNVSDFIAPSQACILPLQSKESD---VEVQIRVRSRSKKVDDN-----AVK 58
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
KVEI+L DCLACSGCITSAE+VLI +QS + ++ + + K V++++ Q
Sbjct: 59 KVEITLKDCLACSGCITSAETVLIKEQSKLKFLEGLAK-----------AKLSVMTVSPQ 107
Query: 124 PVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGP 183
+ S+ K + V + FK +G+ V+D +L +EF + L P
Sbjct: 108 SIASIAYKRGCHLSEAVRLIARIFKNMGIKYVVDSSFGRLLTLSLSYDEFKESQLQR--P 165
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FT CPG+VCYAEK+HG ++P+ISRV+SPQ +MG+L+K +LA K V P I+H ++M
Sbjct: 166 IFTGVCPGFVCYAEKTHGTLLIPHISRVRSPQAMMGALVKDYLARKFNVRPEEIFHASVM 225
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC+DKKLEA+R+ N R+VDCV++ E++ +L +T + G + W
Sbjct: 226 PCFDKKLEAARSHSGN-HFNCREVDCVLSTGEVDAILDECSSTESFSVA--GKVGWLNAL 282
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPL---RNPDIREATFTCGDV 360
N +++ G SGGYA ++ + + ++P +E K +N +I EA +
Sbjct: 283 ENG-KIISSEGGSSGGYAEYIVKRFVEE---SKTP-LELKRTIKDKNWEIIEA-IDGETI 336
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
L GFRNIQN +QKLKR + YD++EIMACPSGC+NGG QIR+ + K+
Sbjct: 337 VLSVAKCYGFRNIQNQVQKLKRSKCNYDYVEIMACPSGCINGGGQIRSASIEERKQ 392
>gi|358059435|dbj|GAA94841.1| hypothetical protein E5Q_01495 [Mixia osmundae IAM 14324]
Length = 620
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 243/514 (47%), Gaps = 124/514 (24%)
Query: 8 GVLQLTDLDDFIGPSQECIKPI---------PIEKPSGPRTGAKIRIQDD---GAYIQ-E 54
+L L+DL+D++GPSQ CIKP+ P + S + A I+ D G Y + E
Sbjct: 2 AMLTLSDLNDYLGPSQICIKPVNEIIDPTPDPAQISSESKAWAATEIRLDEPTGHYYEIE 61
Query: 55 TNGREE-------------------KLKKVEISLTDCLACSGCITSAESVLITQQSHEEV 95
+ G+++ KLKK EI+L DCLACSGCITSAESVL+ QSH EV
Sbjct: 62 SRGKDKGGDQSAGALGVTGLQQQGNKLKKAEITLNDCLACSGCITSAESVLVNLQSHTEV 121
Query: 96 MKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDL 154
V++E + VLS++ Q + SL +++S ++ L FFKR LG L
Sbjct: 122 YTVLQE--------QADDIVPVLSISPQSIASLSVLYSVSPQRTFNALARFFKRTLGFAL 173
Query: 155 VLDVGIAHCFSLVELENEFLDRFLSGGG---------PLFTSECPGWVCYAEKSHGEFIL 205
V D A SL + E L+R+ S PL S CPGW+CYAEK+HGE +L
Sbjct: 174 VFDTDYARELSLAQGRREVLERWQSNAQADTGAHLPLPLLASACPGWICYAEKTHGE-LL 232
Query: 206 PYISRVKSPQQVMGSLIKTHLAEKLGVHP---------------SHIYHVTLMPCYDKKL 250
P+IS VKSPQQ+ GSLIK +L + V IYHV++MPC+DKKL
Sbjct: 233 PFISAVKSPQQIAGSLIKQYLVTRPHVEALLNTTSASEERPRGRRRIYHVSVMPCFDKKL 292
Query: 251 EASRADFYNEELGYRDVDCVITAVELEVLL--------ANELATTTLQEEKDGILDWPW- 301
EASR DF + G RDVDCV+T E+ +L + + +Q + D
Sbjct: 293 EASRPDFADPITGERDVDCVLTTGEVHKMLQDHNVDLSSGDAERNAMQMDGDASSTSEIE 352
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV--VEFKPLRNPD-IREATFTCG 358
DE P GT SGGY N L L + + +E + +R D I G
Sbjct: 353 DELLPRFTSSALGTSSGGYLFNALRAVAASLPSDQQSMLHLESRAVRGEDYIEYRLLFNG 412
Query: 359 DVTLRFCIANGFRNIQNLIQK------------------------------LKRKR---- 384
+ R GFRN+QN+++K ++R R
Sbjct: 413 ALIFRAAKCYGFRNLQNVVRKVGKDKGLAIGHGAARGSMEGPRARSKGLAAVRRARRNDR 472
Query: 385 ------------LPYDFIEIMACPSGCLNGGAQI 406
YDFIE+MACPSGC+NGG Q+
Sbjct: 473 AGAREVVVDAAERSYDFIEVMACPSGCVNGGGQL 506
>gi|312079099|ref|XP_003142028.1| iron only hydrogenase large subunit domain-containing protein [Loa
loa]
gi|307762811|gb|EFO22045.1| cytosolic Fe-S cluster assembly factor [Loa loa]
Length = 447
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 258/476 (54%), Gaps = 36/476 (7%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
S FSG+++++++ DFI PSQ CI P+ ++ K+RIQ + ++ NG + +
Sbjct: 6 SGFSGIVKISNVSDFITPSQACILPL-----QSKQSDMKVRIQAR-SRSKKVNG--DAVN 57
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
KV ++L DCLACSGCITSAE++L+ +QS + ++ + + + V++++ Q
Sbjct: 58 KVVVTLNDCLACSGCITSAETILVKEQSKPKFLEGL-----------ASAQLSVMTVSPQ 106
Query: 124 PVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGP 183
+ S+ K + + G FK +G+ VLD +L +EF + L P
Sbjct: 107 SIASIAYKRGCQTSEAARLIAGIFKNMGMKYVLDSSFGRLLTLSLSYDEFKEAHLQR--P 164
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FT CPG+VCYAEK+HG ++P+ISRV+SPQ +MG+L+K +LA K V P I+H ++M
Sbjct: 165 IFTGVCPGFVCYAEKTHGTLLIPHISRVRSPQAMMGALVKDYLARKFDVKPEKIFHASVM 224
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTT-LQEEKDGILDWPWD 302
PC+DKKLEA+R+ N R+VDCV++ E++ +L AT + EK G L +
Sbjct: 225 PCFDKKLEAARSHSGNYS-DCREVDCVLSTGEVDGILDEYNATESFFASEKVGWL----N 279
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDV-T 361
+++ G SGGYA ++ R + E P+ + +++ + G+
Sbjct: 280 ALENGKVISSEGGSSGGYAEYIVK---RFVAESEKPLELKRTIKDKNWEIIEAVDGETKM 336
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
L GFRNIQ +QKLKR + YD++EIMACPSGC+NGG QIR AS +E L
Sbjct: 337 LSVAKCYGFRNIQIHVQKLKRSKCDYDYVEIMACPSGCINGGGQIRG---ASTEERKKIL 393
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+ I + LE + + W ++L T Y+ + K+ ++ W
Sbjct: 394 DAIELSCSDDNSEMEKELERVKEEW--SVLNPDWMNLLYTKYYAVEKSAERISTNW 447
>gi|327264677|ref|XP_003217138.1| PREDICTED: nuclear prelamin A recognition factor-like isoform 2
[Anolis carolinensis]
Length = 411
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 207/383 (54%), Gaps = 9/383 (2%)
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGI 160
E NA K ++++ K + +S+ Q + AKF L + +LCGF K LGV V D I
Sbjct: 32 EENAEKCDTSKH-KVLAVSICPQSLPYFAAKFNLCVTEAAKRLCGFLKCLGVHYVFDTTI 90
Query: 161 AHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
A FS++E + EF+ R+ + P+F S CPGW+ YAE+ + P+I KSPQ
Sbjct: 91 AADFSILESQKEFVQRYRNQNQEEHALPMFASACPGWIQYAERVLSSLVTPHICTAKSPQ 150
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE 275
Q+MGSLIK + A + + I+H+ + PCYDKKLEA R D Y +DVDCV+T+
Sbjct: 151 QIMGSLIKGYFARQQNLSSDKIFHIIVAPCYDKKLEALREDVYAPLYHSQDVDCVLTSG- 209
Query: 276 LEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG 335
EV E +L+E + D + N ++ +G S GY ++ HA ++L
Sbjct: 210 -EVFQVMEQRKVSLKEAAEVPFDTLFGGINESDLMRHDGRRSDGYLEHIFKHAAKELFDT 268
Query: 336 ESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMA 394
E + +K L+N D +E T G+ LRF A GFRNIQN++ KLK+ + Y F+E++A
Sbjct: 269 EVKELTYKVLKNKDFQEVTLEKGGETVLRFAAAYGFRNIQNMVLKLKKGKCSYHFVEVLA 328
Query: 395 CPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDK 454
CP GCLNG Q + E K ++E + + P N ++ LY+ WL G + K
Sbjct: 329 CPGGCLNGKGQAQTEDGKPDKALLKQMEEVYAAVPVQLPETNGHVQKLYQEWLEGMDSVK 388
Query: 455 GKHMLNTSYHNIPKNNIALNVKW 477
+ L+T Y + +L++KW
Sbjct: 389 VQQSLHTKYSSEKPVANSLDIKW 411
>gi|426238303|ref|XP_004013094.1| PREDICTED: nuclear prelamin A recognition factor isoform 2 [Ovis
aries]
Length = 408
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 210/383 (54%), Gaps = 12/383 (3%)
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGI 160
+ N K ++++ + + +S+ Q + AKF+LS +LCGF K LGV V D I
Sbjct: 32 QENGEKCDTSKH-RVLAVSVCPQSLPYFAAKFSLSVTDASRRLCGFLKSLGVHYVFDTTI 90
Query: 161 AHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
A FS++E + EF+ RF P+ TS CPGWV YAE+ G + P++ KSPQ
Sbjct: 91 AADFSILESQKEFVRRFRQHNEEEPALPMLTSACPGWVRYAERVLGHPVTPHLCTAKSPQ 150
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE 275
Q+MGSL+K + A + + P I+HV + PCYDKKLEA + D G R DCV+T+ E
Sbjct: 151 QIMGSLVKDYFARRQNLSPDKIFHVIVAPCYDKKLEALQEDVLTASRGSRGTDCVLTSGE 210
Query: 276 LEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG 335
+ ++ E + +++E LD + + +G GS GY ++ HA ++L
Sbjct: 211 IAQMM--EQSDVSVRE---AALDTLFGNVKEEELRRHDGAGSDGYLAHIFRHAAKELFNE 265
Query: 336 ESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMA 394
+ V ++ LRN D +E T G+V LRF A GFRNIQN++ KLK+ + PY F+E++A
Sbjct: 266 DVGEVTYRALRNKDFQEVTLEKSGEVLLRFAAAYGFRNIQNVVLKLKKGKFPYHFVEVLA 325
Query: 395 CPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDK 454
C GCLNG Q + + K +++ I D+ P + ++ LY+ WL G + +
Sbjct: 326 CAGGCLNGRGQAQTADGRTDKALLQKMKGIYADIPVQLPEASTHVQELYQEWLDGTDSPR 385
Query: 455 GKHMLNTSYHNIPKNNIALNVKW 477
+ L+T+Y + + ++KW
Sbjct: 386 VQEALHTAYQGPGRPADSRDIKW 408
>gi|134284357|ref|NP_001077077.1| nuclear prelamin A recognition factor isoform d [Homo sapiens]
gi|16741189|gb|AAH16440.1| NARF protein [Homo sapiens]
gi|119610201|gb|EAW89795.1| hCG30379, isoform CRA_e [Homo sapiens]
Length = 408
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 214/384 (55%), Gaps = 14/384 (3%)
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGI 160
+ N K ++++ K +V+S+ Q + AKF LS +LCGF K LGV V D I
Sbjct: 32 QENGEKCDTSKH-KVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTI 90
Query: 161 AHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
A FS++E + EF+ R+ P+ TS CPGWV YAE+ G I ++ KSPQ
Sbjct: 91 AADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAERVLGRPITAHLCTAKSPQ 150
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE 275
QVMGSL+K + A + + P I+HV + PCYDKKLEA + G R DCV+T+ E
Sbjct: 151 QVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESLPPALHGSRGADCVLTSGE 210
Query: 276 L-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCP 334
+ +++ +L+ +D +D + + ++ +G S G+ ++ HA ++L
Sbjct: 211 IAQIMEQGDLSV------RDAAVDTLFGDLKEDKVTRHDGASSDGHLAHIFRHAAKELFN 264
Query: 335 GESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIM 393
+ V ++ LRN D +E T G+V LRF A GFRNIQN+I KLK+ + P+ F+E++
Sbjct: 265 EDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLKKGKFPFHFVEVL 324
Query: 394 ACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTD 453
AC GCLNG Q + + K ++E I D+ P +A ++ LY+ WL G ++
Sbjct: 325 ACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQELYQEWLEGINSP 384
Query: 454 KGKHMLNTSYHNIPKNNIALNVKW 477
K + +L+T+Y + + +L++KW
Sbjct: 385 KAREVLHTTYQSQERGTHSLDIKW 408
>gi|170583169|ref|XP_001896462.1| Iron only hydrogenase large subunit, C-terminal domain containing
protein [Brugia malayi]
gi|259511299|sp|A8PGQ3.1|NARF_BRUMA RecName: Full=Probable cytosolic Fe-S cluster assembly factor
Bm1_25010
gi|158596328|gb|EDP34689.1| Iron only hydrogenase large subunit, C-terminal domain containing
protein [Brugia malayi]
Length = 448
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 258/466 (55%), Gaps = 34/466 (7%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
FSG++++ ++ DFI PSQ CI P+ ++ +IR++ + ++ +KKV
Sbjct: 8 FSGIIKIANVSDFIAPSQACILPLQSKESD---VEVQIRVRSRAKKVDDS-----AVKKV 59
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
E++L DCLACSGCITSAE++LI +QS + ++ +++ + V++++ Q +
Sbjct: 60 EVTLKDCLACSGCITSAETILIKEQSKPKFLEGLKK-----------AQLSVMTVSPQSI 108
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPLF 185
S+ K + + F +G+ V+D +L +EF + L P+F
Sbjct: 109 ASIAYKRGCHLSEAARLIARIFMNMGMKYVVDSSFGRLLTLSLSYDEFKESQLQR--PIF 166
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
T CPG+VCYAEK+HG ++P+IS V+SPQ +MG+L+K +LA K V P I+H ++MPC
Sbjct: 167 TGVCPGFVCYAEKTHGTLLIPHISCVRSPQAMMGALVKDYLARKFNVRPEEIFHASVMPC 226
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
+DKKLEA+R+ N R+VDCV++ E++ +L + ++T DG + W N
Sbjct: 227 FDKKLEAARSHSEN-HFNCREVDCVLSTGEVDAIL--DECSSTESFPVDGKVGWLNALEN 283
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGD-VTLRF 364
+++ G SGGYA ++ + + ++P+ + +++ + G+ + L
Sbjct: 284 -GKIISSEGGSSGGYAEYIVKRFVEE---SKTPLKLKRTIKDKNWEIIEAVDGETIVLSV 339
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETI 424
GFRNIQN +QKLKR + YD++EIMACPSGC+NGG QIR+ AS +E L+TI
Sbjct: 340 AKCYGFRNIQNQVQKLKRSKCNYDYVEIMACPSGCINGGGQIRS---ASIEERKQLLDTI 396
Query: 425 LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
++ LE + + W ++L T YH + K++
Sbjct: 397 ELPCSEDNSEMEEQLERVKEEW--SILNPDWMNLLYTKYHAVVKSD 440
>gi|354469093|ref|XP_003496965.1| PREDICTED: nuclear prelamin A recognition factor-like isoform 2
[Cricetulus griseus]
Length = 409
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 206/377 (54%), Gaps = 24/377 (6%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
+ +V+S+ Q + AKF LS +LCGF K LGV V D IA FS++E + EF
Sbjct: 44 RVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEF 103
Query: 174 LDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
+ R+ P+ TS CPGWV YAE+ G ++P++ KSPQQ+MGSL+K + A
Sbjct: 104 VRRYHRHSEEQRELPMLTSACPGWVRYAERVLGRPVIPHLCTAKSPQQIMGSLVKDYFAR 163
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELAT- 286
+ + P I+HV + PCYDKKLEA R G R DCV+T+ E+ +++ ++L+
Sbjct: 164 QQNLSPEKIFHVVVAPCYDKKLEALREGLSTTLNGARGTDCVLTSGEIAQIMEQSDLSVK 223
Query: 287 -----TTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVE 341
T + K+ + W D G S G+ +V HA ++L +
Sbjct: 224 DTAVDTLFGDVKEEVAVWRHD-----------GVSSDGHLAHVFRHAAKELFGEHIEEIN 272
Query: 342 FKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCL 400
++ LRN D E T G+V LRF A GFRNIQN+I KLK+ + PY F+E++ACP GCL
Sbjct: 273 YRALRNKDFHEVTLEKNGEVLLRFAAAYGFRNIQNMILKLKKGKFPYHFVEVLACPRGCL 332
Query: 401 NGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
NG Q + E + + ++E I + P +A +E LY+ WL G + K + +L+
Sbjct: 333 NGRGQAQTEDGHTDRALLQQMEGIYSGIPVRPPESSAHVEELYQQWLEGTESPKVQEVLH 392
Query: 461 TSYHNIPKNNIALNVKW 477
T+Y ++ +L++KW
Sbjct: 393 TTYQSLEPCTDSLDMKW 409
>gi|297273920|ref|XP_001113437.2| PREDICTED: nuclear prelamin A recognition factor isoform 1 [Macaca
mulatta]
Length = 409
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 211/384 (54%), Gaps = 13/384 (3%)
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGI 160
+ N K ++++ K +V+S+ Q + AKF LS +LCGF K LGV V D I
Sbjct: 32 QENGEKCDTSKH-KVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTRI 90
Query: 161 AHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
A FS++E + EF+ R+ P+ TS CPGWV YAE+ G I ++ KSPQ
Sbjct: 91 AADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAERVLGRPITAHLCTAKSPQ 150
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE 275
QVMGSL+K + A + + P I+HV + PCYDKKLEA + F G R DCV+T+ E
Sbjct: 151 QVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQEGFPPALHGSRGADCVLTSGE 210
Query: 276 L-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCP 334
+ +++ +L+ D D+ H +G S G+ ++ HA ++L
Sbjct: 211 IAQIMDQGDLSVKDAASTLCKFGDLKEDKVTRH-----DGASSDGHLAHIFRHAAKELFN 265
Query: 335 GESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIM 393
+ V ++ LRN D +E T G+V LRF A GFRNIQN+I KLK+ + PY F+E++
Sbjct: 266 EDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLKKGKFPYHFVEVL 325
Query: 394 ACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTD 453
AC GCLNG Q + + K ++E I D+ P +A ++ LY+ WL G ++
Sbjct: 326 ACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHMQELYQEWLEGINSP 385
Query: 454 KGKHMLNTSYHNIPKNNIALNVKW 477
K + +L+T+Y + + +L++KW
Sbjct: 386 KAREVLHTTYQSQERGAHSLDIKW 409
>gi|395825754|ref|XP_003786086.1| PREDICTED: nuclear prelamin A recognition factor isoform 2
[Otolemur garnettii]
Length = 408
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 202/370 (54%), Gaps = 11/370 (2%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
K +V+S+ Q + AKF LS +LCGF K LGV V D IA FS++E + EF
Sbjct: 44 KVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEF 103
Query: 174 LDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
+ R+ P+ TS CPGWV YAE+ G + P++ KSPQQVMGSL+K + A
Sbjct: 104 VRRYHQHSEKERVLPMLTSACPGWVRYAERVLGRPVTPHLCTAKSPQQVMGSLVKDYFAR 163
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTT 288
+ + P I+HV + PCYD+KLEA R F + DCV+T+ E+ ++A +
Sbjct: 164 QQSLSPEKIFHVIVAPCYDRKLEALREGFSSTSRSSLGADCVLTSGEIAQIMAQSDLSV- 222
Query: 289 LQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNP 348
+D +D + + ++ +G S G+ +V +A ++L + V ++ LRN
Sbjct: 223 ----QDATVDTLFGDSKEEMVMRHDGASSDGHLVHVFRYAAKELFNEDVEEVTYRALRNK 278
Query: 349 DIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
D +E T G+V LRF A GFRNIQN+I KLK+ PY F+E++ACP GCLNG Q
Sbjct: 279 DFQEVTLEKDGEVLLRFAAAYGFRNIQNMILKLKKGTFPYHFVEVLACPGGCLNGRGQAE 338
Query: 408 NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
+ K ++E I D+ P +A ++ LY+ WL G + K + L+T++ +
Sbjct: 339 TQDGHVDKALLRQMEGIYSDIPVRPPETSANVQELYQQWLDGVDSPKAQETLHTTFQSPE 398
Query: 468 KNNIALNVKW 477
+L+++W
Sbjct: 399 HCAHSLDIRW 408
>gi|426346279|ref|XP_004040807.1| PREDICTED: nuclear prelamin A recognition factor isoform 3 [Gorilla
gorilla gorilla]
Length = 408
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 214/386 (55%), Gaps = 14/386 (3%)
Query: 99 IRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDV 158
+ + N K ++++ K +V+S+ Q + AKF LS +LCGF K LGV V D
Sbjct: 30 LAQENGEKCDTSKH-KVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDT 88
Query: 159 GIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
IA FS++E + EF+ R+ P+ TS CPGWV YAE+ G I ++ KS
Sbjct: 89 TIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAERVLGRPITAHLCTAKS 148
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITA 273
PQQVMGSL+K + A + + P I+HV + PCYDKKLEA + G R DCV+T+
Sbjct: 149 PQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESLPPALHGSRGADCVLTS 208
Query: 274 VEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQL 332
E+ +++ +L+ +D +D + + ++ +G S G+ ++ HA ++L
Sbjct: 209 GEIAQIMEQGDLSV------RDAAVDTLFGDLKEDKVTRHDGASSDGHLAHIFRHAAKEL 262
Query: 333 CPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIE 391
+ V ++ LRN D +E T G+V LRF A GFRNIQN+I KLK+ + P+ F+E
Sbjct: 263 FNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLKKGKFPFHFVE 322
Query: 392 IMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKS 451
++AC GCLNG Q + + K ++E I D+ P +A ++ LY+ WL G +
Sbjct: 323 VLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQELYQEWLEGIN 382
Query: 452 TDKGKHMLNTSYHNIPKNNIALNVKW 477
+ K + +L+T+Y + +L++KW
Sbjct: 383 SPKAREVLHTTYQSQEHGAHSLDIKW 408
>gi|328854173|gb|EGG03307.1| hypothetical protein MELLADRAFT_49568 [Melampsora larici-populina
98AG31]
Length = 494
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 179/514 (34%), Positives = 254/514 (49%), Gaps = 57/514 (11%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPI----PIEKPSGPRTGAKIRIQDDGAYIQETN 56
M S FS L DL+D++GPSQ CIKP PI K P +IR+ D I +
Sbjct: 1 MPPSNFSP--SLIDLNDYLGPSQLCIKPTESIEPIIKEEVPSAVTEIRL--DEVPITLSA 56
Query: 57 GREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTI 116
KK EISLTDCLACSGC+TS+ESVL+ QS ++ ++ + T
Sbjct: 57 PEPLPQKKAEISLTDCLACSGCVTSSESVLVALQSTSQLYSTLKADT---------TLYP 107
Query: 117 VLSLAIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLD 175
++S++ Q + SL A + LS L FF + +G LV D + SL + + EF D
Sbjct: 108 IISISTQSLASLSAYYKLSISATFESLKTFFIEIIGFHLVFDSKFSQALSLYQTKLEF-D 166
Query: 176 RFLSGGGP------LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK-THLAE 228
R + +S CPGW+CYAEK+ E IL IS VKSPQ + GS+IK T ++
Sbjct: 167 RIHRQKQAQVKPKTILSSSCPGWICYAEKTQTEDILNMISNVKSPQAIQGSIIKSTQFSK 226
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE----L 284
+ V P+ IYHVT+M CYDKKLEASR DF N E G +DVD V+T E++ +L L
Sbjct: 227 LINVTPNQIYHVTIMSCYDKKLEASRQDFINSESGVKDVDLVLTTGEVQKMLEEHHFDLL 286
Query: 285 ATTTLQEEKDGILDWP-----WDEHNPHRMLLVNG--------TGSGGYAHNVLSHAIRQ 331
+ ++ Q + + P H P ++ + SGGY ++ + +
Sbjct: 287 SASSSQPQITQTSNAPKLSSEVTSHTPSTSIIPTWIDRPESERSSSGGYLQFIIQSILDE 346
Query: 332 LCPGESPV-VEFKPLRNPDIREATFTCGD-----VTLRFCIANGFRNIQNLIQKLKRKRL 385
++ + +E K R D E T D V + GF+N+QNL++K K
Sbjct: 347 HKSADATLTIERK--RGRDYCEYLITTTDQDTKKVLFKGAHCYGFKNLQNLVRKFKG--- 401
Query: 386 PYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKA 445
P D++E+MACPSGCLNGG QI ++ ELE+ S P + E + +
Sbjct: 402 PTDYVEVMACPSGCLNGGGQISKPDHYETRDWLDELESKYSTSGISPPTMISQDEEI-ED 460
Query: 446 WLGGKSTDKGKH--MLNTSYHNIPKNNIALNVKW 477
WL D+ H + T Y +P V+W
Sbjct: 461 WLKKWFPDQKDHQNLFKTQYRVVPIETNGFAVQW 494
>gi|344229878|gb|EGV61763.1| hypothetical protein CANTEDRAFT_109743 [Candida tenuis ATCC 10573]
Length = 532
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 235/466 (50%), Gaps = 80/466 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEK--PSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
S +L DL+DFI P CIKP P +K P+ +I + D + + +G L
Sbjct: 1 MSAILSADDLNDFITPGAACIKP-PTQKENPNNGEVEVQIGMDGDPLEVSKIDGSTSNLS 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI--RENNAHKASSNENTKTIVLSLA 121
+ISL DCLACSGCITSAE +L+ Q SH+E++K + R+ N H V S++
Sbjct: 60 PAQISLADCLACSGCITSAEEILVAQHSHQELLKALNQRDTNTH----------FVASVS 109
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
Q SL ++ EQ L F ++G V+ + SL+ + + S
Sbjct: 110 HQSRASLATALGVTVEQADRLLINLFVNQMGFQAVVGTSLGRKLSLISESYNIIHKKESN 169
Query: 181 -GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
GPL +S CPGWV YAEK+H +ILP +S +KSPQQ+ G L+K +AE+LG S+IYH
Sbjct: 170 FEGPLLSSVCPGWVLYAEKTH-PYILPKMSDIKSPQQITGCLLKNIMAEQLGTDKSNIYH 228
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELAT------------- 286
+++MPC+DKKLE++R + EE Y+DVDCV+TA EL LL T
Sbjct: 229 LSIMPCFDKKLESARPEKGEEESTYKDVDCVLTAKELVTLLDQHPDTFKLIPDDVNDVIH 288
Query: 287 --TTLQE--EKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVE- 341
++QE ++ ++WP E+ +G+ SGGY+HN L+ L +VE
Sbjct: 289 SRVSIQEIYKQVAPVNWPLVEYAWSND---SGSASGGYSHNYLTIMKNHLMTKSPELVED 345
Query: 342 ---FKPL--RNPDIREATFTCGDVTL-RFCIANGFRNIQNLIQKLK-------------- 381
K + +N DI E D + I NGFRNIQNL+++ K
Sbjct: 346 NFSIKTIYGKNTDIYELRLMYNDEKVASAAIVNGFRNIQNLVRRFKPSAPQKATAKVNPL 405
Query: 382 ----RKRLPY-----------------DFIEIMACPSGCLNGGAQI 406
R R+ D++E+MACP+GC+NGG QI
Sbjct: 406 VARRRARMSKPSGEGSIQEELADASKCDYVEVMACPNGCINGGGQI 451
>gi|443894303|dbj|GAC71651.1| nuclear architecture related protein [Pseudozyma antarctica T-34]
Length = 698
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 164/434 (37%), Positives = 231/434 (53%), Gaps = 65/434 (14%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-----------PIEKPSGPRTGAKIRIQDDGAYIQE 54
FSG L LTDL+D++GPSQ CIKP+ P + + +I I DG+Y +
Sbjct: 3 FSGALTLTDLNDYLGPSQACIKPVEGPDAPAPEPEPEPLDAAAQASTQIAIDHDGSYYES 62
Query: 55 TNG-------REE-KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE-NNAH 105
+ RE KL+ EISL DCLACSGC+TSAESVLIT QS EE+ + ++E +A
Sbjct: 63 SASTSTASKPRERTKLETAEISLNDCLACSGCVTSAESVLITMQSQEELRRAVQEIRDAG 122
Query: 106 KASSNENTKTIVLSLAIQPVLSLGAKFALSHEQ-------VVAKLCGFFK-RLGVDLVLD 157
+ S +V S++ Q + SL AK+ + ++ ++ F + + G D V D
Sbjct: 123 QPS------LLVASISPQSLASLSAKYTFNSAHPELPLDLLLHRISHFLRAQFGFDYVYD 176
Query: 158 VGIAHCFSLVELENEFLDRFLSGGG-------PLFTSECPGWVCYAEKSHGEFILPYISR 210
A +L E NEF +R + P+ S CPGW+CYAEK+HGE +LPYIS
Sbjct: 177 TTFARHIALQEHTNEFFERRSNSSAGADGPSLPMLASACPGWICYAEKTHGE-LLPYISA 235
Query: 211 VKSPQQVMGSLIKTHLAEKLGVHP-SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDC 269
KSPQQ+ G + K L +L + + +YHVT+MPCYDKKLEASR DFYNE +DVDC
Sbjct: 236 TKSPQQLAGVIAKRFLPHRLHLAADTTVYHVTVMPCYDKKLEASRPDFYNEVTRSKDVDC 295
Query: 270 VITAVELEVLLANE--LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGY------- 320
V+T EL+ L+ ++ T L E+D + R+L G+ SGGY
Sbjct: 296 VLTTGELDTLMHDQGFDITQPLPNEQDALSHPSTSAVTLPRLLDQPGSSSGGYMFALMRA 355
Query: 321 ------AHNV--LSHAIRQLCPGESPVVEFKPLRNPDIREATFT---CGDVTLRFCIANG 369
AHN L ++R+ G P ++ + +R D E V R G
Sbjct: 356 VWADWIAHNAPRLPESVRE--SGVMPKLDVRVIRTADFTEYLLRDPLSSSVLFRGAQCYG 413
Query: 370 FRNIQNLIQKLKRK 383
FRN+QNL++KL+++
Sbjct: 414 FRNLQNLVRKLQKQ 427
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/21 (76%), Positives = 20/21 (95%)
Query: 387 YDFIEIMACPSGCLNGGAQIR 407
YD++E+MACPSGC+NGG QIR
Sbjct: 497 YDYVEVMACPSGCVNGGGQIR 517
>gi|348558156|ref|XP_003464884.1| PREDICTED: nuclear prelamin A recognition factor-like isoform 2
[Cavia porcellus]
Length = 407
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 218/414 (52%), Gaps = 16/414 (3%)
Query: 73 LACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT---KTIVLSLAIQPVLSLG 129
+ C C T E T+ EE + + A ++ +T K +V+S+ Q +
Sbjct: 1 MKCEHC-TRKECSKKTKTDEEENVSAEARSLAQESCEKCDTSKHKVLVVSVCPQSLPYFA 59
Query: 130 AKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PL 184
AK LS +LCGF K LGV V D+ IA FS++E + EF+ R+ P+
Sbjct: 60 AKLNLSVTDASRRLCGFLKSLGVHYVFDMAIAADFSILESQREFVRRYHQHSDEQRALPM 119
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS CPGWV YAE+ G + P++ KSPQQVMGSL+K + A++ + P I+HV + P
Sbjct: 120 LTSACPGWVRYAERVLGRPVTPHLCTAKSPQQVMGSLVKDYFAKQQNLPPEKIFHVVVAP 179
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
CYD+KLEA + F G R DCV+T+ E+ ++ + KD +D + +
Sbjct: 180 CYDRKLEALQEGFSTAAPGARGTDCVLTSGEVAQIMDQSGLSV-----KDAAVDTLFGDE 234
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLR 363
M +G GS G+ +V HA ++L + + PLRN D +E T G+V LR
Sbjct: 235 EV-AMRRHDGAGSDGHLAHVFRHAAKELFNERVEEITYCPLRNKDFQEVTLEKNGEVLLR 293
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELET 423
F A GFRN+QNL+ KL++ + PY F+E++ACP GCLNG Q + + K ++E
Sbjct: 294 FAAAYGFRNVQNLVLKLRKGKFPYHFVEVLACPGGCLNGRGQAQTKDGHMDKSLLRQMEG 353
Query: 424 ILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
I D+ P + ++ LY+ WL G + + L+T++ + + L++KW
Sbjct: 354 IYADIPVQPPESSTHVQELYQEWLEGTDSLRAHETLHTTFQSPEFCSAGLDMKW 407
>gi|357467419|ref|XP_003603994.1| Cytosolic Fe-S cluster assembly factor NARFL [Medicago truncatula]
gi|355493042|gb|AES74245.1| Cytosolic Fe-S cluster assembly factor NARFL [Medicago truncatula]
Length = 403
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 213/390 (54%), Gaps = 30/390 (7%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
K +++S++ Q S+ F +S Q KL FFK LGV + D + +LVE EF
Sbjct: 18 KAVIVSVSPQSRTSIATHFGISPVQAFKKLTRFFKSLGVRAIFDTSCSRDLTLVESCVEF 77
Query: 174 LDRFLS----------GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK 223
+ R+ P+ S CPGW+CYAEK G F+LPYIS VKSPQQ +G++IK
Sbjct: 78 ITRYRQNQLVDDERSKSSLPMIASACPGWICYAEKQLGSFVLPYISSVKSPQQTIGTIIK 137
Query: 224 THLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFY-----------NEELGYRDVDCVIT 272
++ + + + P +YHVT+MPCYDKKLEASR DF E +VD V+T
Sbjct: 138 RYVCQDMELRPEEVYHVTVMPCYDKKLEASRDDFVFQLDPHAEGHEGEVNMISEVDSVLT 197
Query: 273 AVE-LEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQ 331
E LE++ + E+ +L+E LD N L SGGYA + +A +
Sbjct: 198 TGEILELVQSKEVDFKSLEE---APLDKLLTNVNEEGDLYGVRGSSGGYAETIFRYAAKT 254
Query: 332 LCPG--ESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYD 388
L + P ++F+ +RN D +E T G+ L+F + GFRN+QN ++KLK + Y
Sbjct: 255 LFGRHIDGP-LDFRNIRNSDFQEVTLEVEGETVLKFALCYGFRNLQNTVRKLKTGKYDYH 313
Query: 389 FIEIMACPSGCLNGGAQIRNEKVASPKETALELETI-LCDLAKSEPRENATLEHLYKAWL 447
F+EIMACPSGCLNGG QI+ S KE + LE++ + ++ +EP +N ++ LY WL
Sbjct: 314 FLEIMACPSGCLNGGGQIKPVSGQSAKELSHLLESVYMENVLPAEPFDNPIIKGLYDNWL 373
Query: 448 GGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
++K + ++T YH + K+ + W
Sbjct: 374 EQPGSEKARRFMHTQYHAVKKSITSQLHNW 403
>gi|150866595|ref|XP_001386245.2| nuclear architecture related protein [Scheffersomyces stipitis CBS
6054]
gi|259511477|sp|A3LYR2.2|NAR1_PICST RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|149387851|gb|ABN68216.2| nuclear architecture related protein [Scheffersomyces stipitis CBS
6054]
Length = 545
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 240/486 (49%), Gaps = 86/486 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPI---EKPSGPRTGAKIRIQDDGA----YIQETNGR 58
S +L DL+DFI P CIKP +K + ++ IQ D I + +G+
Sbjct: 1 MSAILSADDLNDFISPGVACIKPPAQNSDQKFNSLNENGEVEIQIDSEGNPLEISKIDGK 60
Query: 59 EEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVL 118
+ L +ISL DCLACSGCITSAE VL+ Q SHEE++K + E N +TK V
Sbjct: 61 QTNLSPAQISLADCLACSGCITSAEEVLVAQHSHEELIKALNEK-----VDNNSTKVFVA 115
Query: 119 SLAIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLV-ELENEFLDR 176
S++ Q SL + LS E++ L F ++G ++ I SL+ E +N +
Sbjct: 116 SISHQSRASLATAYNLSIEEIDKLLINLFINQMGFKYIVGTSIGRKLSLINEAQNLIEKK 175
Query: 177 FLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
GP+ +S CPGWV YAEK+H ++LP +S VKSPQQ+ G L+KT A +LGV +
Sbjct: 176 ESEFDGPVLSSICPGWVLYAEKTH-PYVLPRMSTVKSPQQITGCLLKTLAAHELGVTRND 234
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL--------ATTT 288
IYH+++MPC+DKKLE++R + Y E+ DVDCV+TA EL LL T
Sbjct: 235 IYHLSIMPCFDKKLESARPEKYGEQNTSNDVDCVLTAKELVTLLEQHSDKFQLIPPQAHT 294
Query: 289 LQEEKDGILD---------WPWDEHNPHRMLLVNGTGSGGYAHN---------VLSHAIR 330
+ ++D WP +++ +G+ SGGY +N ++ H +
Sbjct: 295 ITNSAIPVVDLYSKCAPRTWPLVQYSWSND---SGSASGGYGYNYLKMYQNHLIMKHPTK 351
Query: 331 QLCPGESPVVEFKPLRNPDIREATFTCGDVTL-RFCIANGFRNIQNLIQKLK-------- 381
G S +++ RN D+ E G L I NGFRNIQNL++KLK
Sbjct: 352 YQQEGFS--IDYVKGRNTDLTEMRLMYGSEKLASSAIVNGFRNIQNLVRKLKPTVKPGST 409
Query: 382 ---------RKRLPY----------------------DFIEIMACPSGCLNGGAQIRNEK 410
R+R D++EIMACP+GC+NGG QI +
Sbjct: 410 TGKGNALVARRRARVAGGITKASSPAGSDESADASKCDYVEIMACPNGCINGGGQINPPE 469
Query: 411 VASPKE 416
S K+
Sbjct: 470 DVSEKD 475
>gi|343960252|dbj|BAK63980.1| nuclear prelamin A recognition factor-like [Pan troglodytes]
Length = 346
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 162/233 (69%), Gaps = 10/233 (4%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK +G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRAGSGV-AKIRIEDDGSYFQINQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A+F L+ KL FFK++GV V D + FSL+E + EF+ RF
Sbjct: 118 PQSRASLAARFQLNPTDTARKLTSFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQA 177
Query: 182 G-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK 229
PL S CPGW+CYAEK+HG FILP+IS +SPQQVMGSL+K A++
Sbjct: 178 DCRQALPLLASACPGWICYAEKTHGSFILPHISTARSPQQVMGSLVKDFFAQQ 230
>gi|448106612|ref|XP_004200790.1| Piso0_003397 [Millerozyma farinosa CBS 7064]
gi|448109697|ref|XP_004201421.1| Piso0_003397 [Millerozyma farinosa CBS 7064]
gi|359382212|emb|CCE81049.1| Piso0_003397 [Millerozyma farinosa CBS 7064]
gi|359382977|emb|CCE80284.1| Piso0_003397 [Millerozyma farinosa CBS 7064]
Length = 537
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 238/475 (50%), Gaps = 72/475 (15%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAK----IRIQDDGA--YIQETNGRE 59
S +L DL+DFI P CIKP+ + SG + G + I+I DG + + +G
Sbjct: 1 MSAILSADDLNDFISPGVACIKPV--QNVSGSKDGQQDEVEIQIDQDGEPLEVSKADGEA 58
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLS 119
KL +ISL+DCLACSGCITSAE VL+ Q SH E+ + + EN + + K V S
Sbjct: 59 SKLNPAQISLSDCLACSGCITSAEEVLVAQHSHNELTRALEENR-----TQQTKKVFVAS 113
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFL 178
++ Q SL + +S + L F ++G V+ + SL+ +DR
Sbjct: 114 VSHQSRASLAGAYGVSVAVMDKLLIDLFVAQMGFTHVVGTSLGRSLSLIYEAQNIIDRKT 173
Query: 179 SG-GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
G GP +S CPGWV YAEK+H +++P++S VKSPQQ+ G L+K+ +A +LG+ +I
Sbjct: 174 RGVSGPTLSSVCPGWVLYAEKTH-PYVIPHMSDVKSPQQITGCLLKSLVARELGISRDNI 232
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI- 296
YHV++MPC+DKKLE++R + Y+ EL DVDCV+T EL L+ +L I
Sbjct: 233 YHVSIMPCFDKKLESARPEKYDGELPSPDVDCVLTPKELVTLIEENTNIYSLIPPHTDIT 292
Query: 297 -LDWPWDEHNPHRMLLVN-------------GTGSGGYAHNVLSHAIRQLCPGESPVV-- 340
L P N ++ + G+ SGGYA++ L+ L + V
Sbjct: 293 KLPQPASMSNIYKQVAPKTWPSIELAWASNEGSSSGGYAYHYLAALQLHLMASDPSVYNP 352
Query: 341 -EFKPL----RNPDIREATFTCGDVTL-RFCIANGFRNIQNLIQKLK------------- 381
EF+ + RN D+ E + + NGF+NIQNL+++LK
Sbjct: 353 QEFELVTVGGRNSDVYEMRLLFRKEKVGSAAVVNGFKNIQNLVRRLKPSKSTVSSNPLAN 412
Query: 382 --RKRLPY------------------DFIEIMACPSGCLNGGAQIRNEKVASPKE 416
R RL D++EIMACP+GC+NGG QI S KE
Sbjct: 413 RRRARLAKANKSDDSSDTDQADPSKCDYVEIMACPNGCINGGGQISPPGDVSAKE 467
>gi|332260436|ref|XP_003279295.1| PREDICTED: LOW QUALITY PROTEIN: nuclear prelamin A recognition
factor [Nomascus leucogenys]
Length = 443
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 234/462 (50%), Gaps = 34/462 (7%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K + A Q++G G KL +I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTDDQENVSADALSPAQENG-----EKGEFHKLADAKIFLSDCLACDSCMTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 64 EGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I ++ +SPQQVMGSL+K + A + + P I+HV + PCYDKKLEA +
Sbjct: 181 RVLGCPITAHLCTARSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240
Query: 258 YNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E+ +++ +L+ KD +D + + ++ +G
Sbjct: 241 PPALHGSRGADCVLTSGEIAQIMEQGDLSV------KDAAVDTLFGDLKEDKVTRHDGAS 294
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S G+ ++ HA ++L + V ++ LRN D +E T G+V LRF A GFRN
Sbjct: 295 SDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRN--- 351
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
+ I +AC + CLNG Q + + K ++E I D+ P
Sbjct: 352 ----------EFHHIGTLACAARCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPES 401
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 402 SAHVQELYQEWLEGINSPKAREVLHTTYQSQERGAHSLDIKW 443
>gi|164658812|ref|XP_001730531.1| hypothetical protein MGL_2327 [Malassezia globosa CBS 7966]
gi|159104427|gb|EDP43317.1| hypothetical protein MGL_2327 [Malassezia globosa CBS 7966]
Length = 595
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 178/491 (36%), Positives = 239/491 (48%), Gaps = 101/491 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQ-DDGAYIQ---ETNGREEK 61
FSG L LTDL+D++GPSQ CIKP+ + + I + G Y++ +
Sbjct: 3 FSGALTLTDLNDYLGPSQACIKPVEAPTTTASSNAPESTIALEGGVYVEAPVNAPRARTQ 62
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+ +ISL DCLACSGC+TSAESVLI QS +E IR A K + + +++
Sbjct: 63 LETAQISLNDCLACSGCVTSAESVLIGVQSIDE----IRNELAQK-----RERIFIATIS 113
Query: 122 IQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF-LDRFLSG 180
Q + SL A++ + V ++C K+LG D V D+ +A SL E EF L R
Sbjct: 114 SQTIASLQARWGMQPPAVWTRVCAALKQLGFDQVHDLSLARHMSLYETVREFRLRREARM 173
Query: 181 GG-------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA-EKLGV 232
G P+ S CPGWVCYAEK+HGE +LPY++ KSPQQ+ G L K ++ GV
Sbjct: 174 RGTKDAPTLPMVASACPGWVCYAEKAHGE-LLPYVATTKSPQQLAGILAKRFWGPQQKGV 232
Query: 233 HPS-----HIYHVTLMPCYDKKLEASRADFYNEELGY-RDVDCVITAVELEVLLA----- 281
S ++YHV++MPCYDKKLEA R D NE+ +DVDCV+T EL L+
Sbjct: 233 DISQDSAPYVYHVSVMPCYDKKLEAVRQD--NEQTSQTKDVDCVLTTGELHDLIVGVDVH 290
Query: 282 ----NELATTTLQEEKDGILDWPWD---------------EHNPHRML------------ 310
E + + D +D D E N R+
Sbjct: 291 ANAETEPRESESERASDKQMDEASDAWKHVMSGSSSGSASEQNEARITPRPQVATEFCDP 350
Query: 311 ------LVNGTGSGGYAHNVLSHA----IRQLCPGESPVVEFKPLRNPDIREATFTCGDV 360
G+ SGGY VL A IR P VE LR+ D + T D
Sbjct: 351 AHVPAHQEPGSSSGGYIFAVLLDAYMSWIRSHPDTSQPTVELHILRSTDYTDYTLRAPDG 410
Query: 361 TLRFCIAN--GFRNIQNLIQKLKRK----------RL------------PYDFIEIMACP 396
T F A GFRNIQN+++KL+R+ R+ PYD+IE+MACP
Sbjct: 411 TTLFKGATCYGFRNIQNVVRKLQRETGARSTRGRGRMRSVARPSPQDTHPYDYIEVMACP 470
Query: 397 SGCLNGGAQIR 407
GC+NGG Q+R
Sbjct: 471 GGCVNGGGQLR 481
>gi|170049640|ref|XP_001870905.1| nitrate, fromate, iron dehydrogenase [Culex quinquefasciatus]
gi|167871390|gb|EDS34773.1| nitrate, fromate, iron dehydrogenase [Culex quinquefasciatus]
Length = 462
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 158/213 (74%), Gaps = 4/213 (1%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SRFSG LQLTDLDDFI PSQECIKP+ IE + +TG+KI IQDDG+Y+Q T+ +KL+
Sbjct: 2 SRFSGALQLTDLDDFITPSQECIKPVKIEA-NKSKTGSKITIQDDGSYMQATSSGLQKLE 60
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENTKTIVLSLAI 122
KVEI+L DCLACSGCITSAE VLITQQS EE++KV+ ENN K ++ + + IV ++A
Sbjct: 61 KVEITLADCLACSGCITSAEGVLITQQSQEELLKVMNENNLAKLNNQLDAVRFIVFTVAQ 120
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
QP+LSL ++ L E+ ++ G+F++LG DLV+D IA +L+E NEF++RF +
Sbjct: 121 QPILSLAKRYNLPAEETFERVAGYFRKLGADLVVDTKIADDLALIEGRNEFIERFNTNRQ 180
Query: 183 --PLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
P+ S CPG+VCYAEK+HG FILPYI+ ++
Sbjct: 181 TLPMLASSCPGFVCYAEKTHGSFILPYIATTRT 213
>gi|303286549|ref|XP_003062564.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456081|gb|EEH53383.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 388
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 220/431 (51%), Gaps = 75/431 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
FSG ++L DL+DFI PSQ C+ + + R GA GA T + V
Sbjct: 1 FSGAVKLGDLNDFINPSQNCVVALTAGEVILQRRGAPPSDLPPGA---PTIYGDPSAPTV 57
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++SL+DCLACSGC+TSAE+VL+ QS +E +R
Sbjct: 58 KVSLSDCLACSGCVTSAETVLLEAQSADEFRARVR------------------------- 92
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--- 182
A + G + V +VLD + SL+E EF+ R+ +
Sbjct: 93 --------------AAAMSGGRMVVVVSVVLDTTASRDLSLLESCEEFVSRYRNAKHAAV 138
Query: 183 ------------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
P+ TS CPGWVCYAEK+HG +L ++S VKSPQQVMG ++K +A +L
Sbjct: 139 TNTPPPSPADVLPVLTSACPGWVCYAEKTHGGAVLNHVSAVKSPQQVMGCIVKRKIAAEL 198
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELG--YRDVDCVITAVELEVLLA-----NE 283
GV S ++H T+MPC+DKKLEASR DF ++LG R+VDCV+T E+ ++A
Sbjct: 199 GVPASAVFHATVMPCFDKKLEASREDFAMDDLGENVREVDCVLTTGEVAEMIAVAAGLGA 258
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQL--CPGESPVVE 341
++ + L P D H ++ +GSGGY V HA + L P+
Sbjct: 259 PSSALAFNPRPRCLSTPPDAFQLHPVVR---SGSGGYLDAVFRHAAKVLHGVDVTGPLKY 315
Query: 342 FKP-LRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRL----PYDFIEIMAC 395
P RN D++E T G V LRF A GFRNIQN+++K K + YDF+EIMAC
Sbjct: 316 ATPSSRNLDLKEVTLEVDGAVVLRFAAAYGFRNIQNIVRKCKAGSVATGDAYDFVEIMAC 375
Query: 396 PSGCLNGGAQI 406
PSGCLNGG Q+
Sbjct: 376 PSGCLNGGGQL 386
>gi|255728047|ref|XP_002548949.1| hypothetical protein CTRG_03246 [Candida tropicalis MYA-3404]
gi|240133265|gb|EER32821.1| hypothetical protein CTRG_03246 [Candida tropicalis MYA-3404]
Length = 537
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 236/482 (48%), Gaps = 84/482 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTG------AKIRIQDDGA--YIQETNG 57
S +L DL+DFI P CIKP+ + T +I+I D G I + +G
Sbjct: 1 MSAILSADDLNDFISPGVACIKPLTEDNSKDENTTFNENGEVEIQIDDQGNPLEISQIDG 60
Query: 58 REEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIV 117
++ L +ISL+DCLACSGCITSAE VL+ Q SH+E++ + N + V
Sbjct: 61 KQTNLSPAQISLSDCLACSGCITSAEEVLVAQHSHQELVNALE---------NRGDRVFV 111
Query: 118 LSLAIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDR 176
S++ Q SL + LS + + L F ++G V+ + SL+ + +
Sbjct: 112 ASVSQQSRASLALAYNLSMDDIDKLLINLFIHQMGFTYVVGTSLGRKLSLINEAQSLITK 171
Query: 177 FLS---GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
+ GP+ +S CPGWV YAEK+H ++LP IS VKSPQQ+ G L+K+ A L +
Sbjct: 172 KENKELNNGPVLSSICPGWVLYAEKTH-PYVLPRISTVKSPQQITGCLLKSLTASSLQIP 230
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYN-EELGYRDVDCVITAVELEVLLANELATTTL--Q 290
S +YHV++MPC+DKKLE++R + Y+ E DVDCV+TA EL L+ + +L +
Sbjct: 231 KSKVYHVSIMPCFDKKLESARPEIYDTSEESVPDVDCVLTAKELVTLIEEQSPKYSLLPE 290
Query: 291 EEKDGIL----------------DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLC- 333
++ IL +WP+ E++ G+ SGGYA+N L L
Sbjct: 291 DKISSILQINTPMSEIYQRCAPPNWPFIEYSWSND---PGSASGGYAYNYLKIFQENLLV 347
Query: 334 ----PGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLK------- 381
E +++ RNPDI E G+ + NGFRNIQNL++KLK
Sbjct: 348 KGGYDAEKFMLQTINGRNPDIYELRLMYNGEKLASSAVVNGFRNIQNLVRKLKPTAGGKS 407
Query: 382 -----------RKRLP----------------YDFIEIMACPSGCLNGGAQIRNEKVASP 414
R R+ D++EIMACP+GC+NGG QI +
Sbjct: 408 TVKSNPLAARRRARISTRDKSDTSEETADASKVDYVEIMACPNGCINGGGQISAPSTIAE 467
Query: 415 KE 416
KE
Sbjct: 468 KE 469
>gi|343429622|emb|CBQ73195.1| related to NAR1-similarity to human nuclear prelamin A recognition
factor [Sporisorium reilianum SRZ2]
Length = 727
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 158/455 (34%), Positives = 229/455 (50%), Gaps = 92/455 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIP-IEKPSG---------PRTGAKIRIQDDGAYIQET 55
FSG L LTDL+D++GPSQ CIKP+ + PS +I I DG+Y +
Sbjct: 3 FSGALTLTDLNDYLGPSQACIKPVEGADAPSSLEAAPPEAAASASTQIAIDHDGSYYESA 62
Query: 56 N---------GREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHK 106
+ KL+ EISL DCLACSGC+TSAESVLIT QS EE+ + I E
Sbjct: 63 APSTSTASKPRQRTKLETAEISLNDCLACSGCVTSAESVLITMQSQEEMRRAIAE----- 117
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVA---------KLCGFFKR-LGVDLVL 156
+ +++ V S++ Q + SL AK++ + A ++ F + G D V
Sbjct: 118 IAQSDSPSLRVASISTQSLASLSAKYSFQQQSASAALPLRVLLHRIAHFLQTTFGFDYVY 177
Query: 157 DVGIAHCFSLVELENEFLDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
D A +L E + EF R P+ S CPGW+CYAEK+HGE +LPYIS KSPQQ
Sbjct: 178 DTTFARHIALKEHQREFFQRREDASLPMLASACPGWICYAEKTHGE-LLPYISTTKSPQQ 236
Query: 217 VMGSLIKTHLAEKLG-VHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE 275
V G + K L ++LG + + YHVT+MPCYDKKLEASR DFY++ ++VDCV+T E
Sbjct: 237 VAGVIAKRFLPQRLGLIASATTYHVTVMPCYDKKLEASRPDFYDDITSTKEVDCVLTTGE 296
Query: 276 LEVLLANE------------------LATTTLQEEKDGILDWPWDEHNPH--RMLLVNGT 315
L+ L+ +E +A ++LQ+ + PH ++L G+
Sbjct: 297 LDKLMLDENFDICAPVPGEHEALQHDIADSSLQQALPASM-------LPHIPQLLDQPGS 349
Query: 316 GSGGYAHNVLSH---------------AIRQLCPGESPVVEFKPLRNPDIRE-------- 352
SGGY ++ ++R+ G P ++ + +R D E
Sbjct: 350 SSGGYLFALMRAVWLDWLAQHWHRFPASVRE--QGLLPKLDVRVIRTVDFTEYVLRAPAQ 407
Query: 353 ----ATFTCGDVTLRFCIANGFRNIQNLIQKLKRK 383
A + + R GFRN+QNL++KL+++
Sbjct: 408 LEQDAASSHSSILFRGAQCYGFRNLQNLVRKLQKQ 442
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 5/32 (15%)
Query: 387 YDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
YD++E+MACPSGC+NGG QIR P ETA
Sbjct: 509 YDYVEVMACPSGCVNGGGQIR-----PPTETA 535
>gi|254568180|ref|XP_002491200.1| Nuclear architecture related protein [Komagataella pastoris GS115]
gi|238030997|emb|CAY68920.1| Nuclear architecture related protein [Komagataella pastoris GS115]
gi|328352276|emb|CCA38675.1| hypothetical protein PP7435_Chr2-0995 [Komagataella pastoris CBS
7435]
Length = 503
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 170/454 (37%), Positives = 230/454 (50%), Gaps = 77/454 (16%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETN-GREEKLKK 64
S +L+ DL+DFI P CIKP+ K G +I+I +G ++ T G E KL K
Sbjct: 1 MSAILRADDLNDFIMPGVACIKPVESGK-KGSGEDLEIQIDSEGNALEVTKEGHERKLDK 59
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+ISL+DCLACSGCITSAE VLI Q SH+E++ + ++ N K V S++ Q
Sbjct: 60 AQISLSDCLACSGCITSAEEVLIAQHSHKELLNALE--------TDGNRKVFVASISHQT 111
Query: 125 VLSLGAKFALSHEQVVAKLCGFFK---RLGVDLVLDVG--IAHCFSLVELENEFLDRFLS 179
SL + F + E + L K + + + G ++H F+ ++L+N R
Sbjct: 112 RASLASAFDVQIEAMDKVLIYLLKNVMKFKYVIGTETGRRLSHIFTTLDLQN----RSPH 167
Query: 180 GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
PL S CPGWV YAEK+H FILP IS +KS QQ+ G L+K +++ LG+ S IYH
Sbjct: 168 SEKPLINSTCPGWVLYAEKTH-PFILPRISTIKSTQQITGHLLKNIVSKDLGIEKSQIYH 226
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD- 298
+++MPC+DKKLEA+R + DVDCVITA EL V + EL K+ +LD
Sbjct: 227 LSVMPCFDKKLEAAR------DSDVPDVDCVITAREL-VQVIEELNIDLQTILKESVLDN 279
Query: 299 ----------WPWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
P + P + L N G+ SGGYA L ++ E +E RN
Sbjct: 280 TDIYSVYRSSSPPGWYQPEQSWLNNKGSASGGYAMQYLLDVQQRHADSEIITIEG---RN 336
Query: 348 PDIREATFTC--GDVTLRFCIANGFRNIQNLIQKLK------------RKRLPY------ 387
DI E G V + NGFRNIQNLI+KLK R+R
Sbjct: 337 SDIYEHRLVLRDGQVVASSAVVNGFRNIQNLIRKLKPNHKATGGGISARRRSRKLKEDQT 396
Query: 388 ---------------DFIEIMACPSGCLNGGAQI 406
D++EIMACP GC+NGG QI
Sbjct: 397 GDQGQSNAVVDPSKCDYVEIMACPGGCINGGGQI 430
>gi|38146740|gb|AAR11770.1| LET1-like protein, partial [Komagataella pastoris]
Length = 438
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 170/454 (37%), Positives = 230/454 (50%), Gaps = 77/454 (16%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETN-GREEKLKK 64
S +L+ DL+DFI P CIKP+ K G +I+I +G ++ T G E KL K
Sbjct: 1 MSAILRADDLNDFIMPGVACIKPVESGK-KGSGEDLEIQIDSEGNALEVTKEGHERKLDK 59
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+ISL+DCLACSGCITSAE VLI Q SH+E++ + ++ N K V S++ Q
Sbjct: 60 AQISLSDCLACSGCITSAEEVLIAQHSHKELLNALE--------TDGNRKVFVASISHQT 111
Query: 125 VLSLGAKFALSHEQVVAKLCGFFK---RLGVDLVLDVG--IAHCFSLVELENEFLDRFLS 179
SL + F + E + L K + + + G ++H F+ ++L+N R
Sbjct: 112 RASLASAFDVQIEAMDKVLIYLLKNVMKFKYVIGTETGRRLSHIFTTLDLQN----RSPH 167
Query: 180 GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
PL S CPGWV YAEK+H FILP IS +KS QQ+ G L+K +++ LG+ S IYH
Sbjct: 168 SEKPLINSTCPGWVLYAEKTH-PFILPRISTIKSTQQITGHLLKNIVSKDLGIEKSQIYH 226
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD- 298
+++MPC+DKKLEA+R + DVDCVITA EL V + EL K+ +LD
Sbjct: 227 LSVMPCFDKKLEAAR------DSDVPDVDCVITAREL-VQVIEELNIDLQTILKESVLDN 279
Query: 299 ----------WPWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
P + P + L N G+ SGGYA L ++ E +E RN
Sbjct: 280 TDIYSVYRSSSPPGWYQPEQSWLNNKGSASGGYAMQYLLDVQQRHADSEIITIEG---RN 336
Query: 348 PDIREATFTC--GDVTLRFCIANGFRNIQNLIQKLK------------RKRLPY------ 387
DI E G V + NGFRNIQNLI+KLK R+R
Sbjct: 337 SDIYEHRLVLRDGQVVASSAVVNGFRNIQNLIRKLKPNHKATGGGISARRRSRKLKEDQT 396
Query: 388 ---------------DFIEIMACPSGCLNGGAQI 406
D++EIMACP GC+NGG QI
Sbjct: 397 GDQGQSNAVVDPSKCDYVEIMACPGGCINGGGQI 430
>gi|294655913|ref|XP_458135.2| DEHA2C10406p [Debaryomyces hansenii CBS767]
gi|259511478|sp|Q6BUI4.2|NAR1_DEBHA RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|199430710|emb|CAG86206.2| DEHA2C10406p [Debaryomyces hansenii CBS767]
Length = 545
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 231/473 (48%), Gaps = 81/473 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIP--IEKPSGPRTG-AKIRIQDDGAYIQ--ETNGREE 60
S +L DL+DFI P CIKP + + + G I+I ++G I+ +G
Sbjct: 1 MSAILSADDLNDFISPGVACIKPPAENVNRDTNNENGEVDIQIDNEGNPIEISRLDGTAT 60
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
L +ISL DCLACSGCITSAE +L+ Q SH E++K ++E N+ K V S+
Sbjct: 61 SLSAAQISLADCLACSGCITSAEEILVAQHSHNELIKALKEK-----VQNKTDKVFVASI 115
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLV-ELENEFLDRFL 178
+ Q SL + L+ E+V L F ++G ++ + SL+ E +N +
Sbjct: 116 SHQSRASLATAYNLTVEEVDRLLINLFINQMGFSYIVGTSLGRKLSLIYESQNIISKKEE 175
Query: 179 SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
GP +S CPGWV YAEK+H ++LP IS VKSPQQ+ G L+KT A L +IY
Sbjct: 176 KFEGPTLSSICPGWVLYAEKTH-PYVLPRISDVKSPQQITGCLLKTLTARDLNTTRDNIY 234
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL------------------EVLL 280
H+++MPC+DKKLE++R + E DVDCV+TA EL E +L
Sbjct: 235 HLSIMPCFDKKLESARPEKGEPESAPNDVDCVLTAKELITLLDEHSDDFSLFPPQVESIL 294
Query: 281 ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVV 340
+ L +TT K +WP+ + + NG+ SGGYA++ + A L +
Sbjct: 295 SASLVSTTELYTKCAPKNWPFVDLSWSND---NGSSSGGYAYHYIKLAQEHLILKDPSTY 351
Query: 341 EFKPL-------RNPDIREATFTCGDVTL-RFCIANGFRNIQNLIQKLK----------- 381
+ + RN DI E D T+ I NGFRNIQNL++KLK
Sbjct: 352 QPENFTLKTISGRNSDIYELRLIYKDATVASAAIVNGFRNIQNLVRKLKPSTKQTSTVKA 411
Query: 382 -------RKRLPY---------------------DFIEIMACPSGCLNGGAQI 406
R RL D++EIMACP+GC+NGG QI
Sbjct: 412 NPLASRRRARLASKTDGTASSNNATQDTADASKCDYVEIMACPNGCINGGGQI 464
>gi|355706349|gb|AES02608.1| nuclear prelamin A recognition factor [Mustela putorius furo]
Length = 340
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 181/330 (54%), Gaps = 11/330 (3%)
Query: 142 KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYA 196
+LCGF K LGV V D +A FS++E + EF+ R+ P+ TS CPGWV YA
Sbjct: 5 RLCGFLKSLGVHYVFDTAVAADFSILESQKEFVRRYQQHSEEEPALPMLTSACPGWVRYA 64
Query: 197 EKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD 256
E+ G + P++ KSPQQ+MGSL+K + A + + P I+HV + PCYDKKLEA R D
Sbjct: 65 ERVLGHPVTPHLCTAKSPQQIMGSLVKDYFARRQNLSPDQIFHVIVAPCYDKKLEALRED 124
Query: 257 FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G R DCV+T+ E+ ++ T KD +D + + +G
Sbjct: 125 LPTACHGSRGADCVLTSGEVVQMMEQNDHTV-----KDAAVDTLFGGPKEEEVRRHDGAS 179
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQN 375
S GY +V HA +QL + V ++ LRN D +E T G+V LRF A GFRNIQN
Sbjct: 180 SDGYLAHVFRHAAKQLFDEDVGEVTYRTLRNKDFQEVTLEKNGEVLLRFAAAYGFRNIQN 239
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE 435
++ KLK+ R PY F+E++AC GCL+G Q + E + K ++E I D+ P
Sbjct: 240 VVLKLKKGRFPYHFVEVLACAGGCLSGRGQAQTEDGRADKALLRQMEGIYADIPVRPPET 299
Query: 436 NATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+A ++ LY+ WL G + + + L+T Y
Sbjct: 300 SAHVQELYQEWLDGADSPRVQEALHTMYQG 329
>gi|410052393|ref|XP_511766.4| PREDICTED: nuclear prelamin A recognition factor [Pan troglodytes]
Length = 691
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 237/482 (49%), Gaps = 69/482 (14%)
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
G KL +I L+DCLAC C+T+ E V ++QQ+ ++ +V+ N +K K
Sbjct: 219 KGEFHKLADAKIFLSDCLACDSCVTAEEGVQLSQQNAKDFFRVL---NLNKKCDTSKHKV 275
Query: 116 IVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSL---VELE-- 170
+V+S+ Q + AKF LS +LCGF K LGV V D IA F V++
Sbjct: 276 LVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTIAANFXXXXCVQVSVG 335
Query: 171 ---------NEFLD-------------RFLSG---------------------GGPLFTS 187
++F D R L G G L +
Sbjct: 336 SGPKISCQVSKFCDVLMRSDWAVRLRERTLQGRSHFPVASRPAGSHDPQPGHRGWVLGPA 395
Query: 188 ECPG----------WVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
+ PG WV YAE+ G I ++ KSPQQVMGSL+K + A + + P I
Sbjct: 396 QAPGADRGSLLSPGWVRYAERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKI 455
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGI 296
+HV + PCYDKKLEA + G R DCV+T+ E+ +++ +L+ +D
Sbjct: 456 FHVIVAPCYDKKLEALQESLPPALHGSRGADCVLTSGEIAQIMEQGDLSV------RDAA 509
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF- 355
+D + + ++ +G S G+ ++ HA ++L + V ++ LRN D +E T
Sbjct: 510 VDTLFGDLKEDKVTRHDGASSDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLE 569
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G+V LRF A GFRNIQN+I KLK+ + P+ F+E++AC GCLNG Q + + K
Sbjct: 570 KNGEVVLRFAAAYGFRNIQNMILKLKKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADK 629
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNV 475
++E I D+ P +A ++ LY+ WL G ++ K + +L+T+Y + + +L++
Sbjct: 630 ALLRQMEGIYADIPVRRPESSAHVQELYQEWLEGINSPKAREVLHTTYQSQERGAHSLDI 689
Query: 476 KW 477
KW
Sbjct: 690 KW 691
>gi|344302035|gb|EGW32340.1| nuclear architecture related protein [Spathaspora passalidarum NRRL
Y-27907]
Length = 494
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 230/470 (48%), Gaps = 78/470 (16%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKPI P ++ I+ D + L
Sbjct: 1 MSALLSADDLNDFISPGVACIKPIET-----PSKSNELEIEIDAK-------PKSVLAPA 48
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+ISL DCLACSGCITSAE VL+ Q SH+E++K + E K V S++ Q
Sbjct: 49 QISLADCLACSGCITSAEEVLVAQHSHKELLKAL-----------ETDKVFVASVSHQAR 97
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG-GPL 184
SL + + EQ+ L K++G ++ + SLV N + R + GP
Sbjct: 98 ASLALAYNVDVEQLDQLLIHLLKKMGFRYIVGTSLGRKLSLVNESNSMIQRKMDKTEGPT 157
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
+S CPGWV YAEK+H +I+P +S VKSPQQV G ++K +E+L V + +YH+T+MP
Sbjct: 158 LSSICPGWVLYAEKTH-PYIIPRLSNVKSPQQVTGCILKNLTSEELNVPRNQVYHLTIMP 216
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C+DKKLE++R + + G DVDCV+T E+ L+ ++ G + E
Sbjct: 217 CFDKKLESARPEV---DGGTSDVDCVLTPREVVALIEEMGYDLIAKDYTFGNTSQVYKES 273
Query: 305 NPHRMLLV-------NGTGSGGYAHNVLSHAIRQLCPGESPVV---EFKPL--RNPDIRE 352
P++ V +G+ SGGY + L + L E+ + EFK + RN DI E
Sbjct: 274 APNKWPFVEYAWSNDSGSASGGYGYTYLRLYQQYLISKENYIADQFEFKVVKGRNADIYE 333
Query: 353 ATFTCGDVTLRFC-IANGFRNIQNLIQKLK-------------RKR-------------- 384
D + I NGF+NIQNL++KLK R+R
Sbjct: 334 MRLMYQDTQIASSGIVNGFKNIQNLVRKLKPGNTVAKPNALLARRRGRGGSTAKAKKTSE 393
Query: 385 ----LPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAK 430
D++EIMACPSGC+NGG QI SP E +E + I L K
Sbjct: 394 EADPSKCDYVEIMACPSGCINGGGQI------SPAEGIVEKDWIALGLEK 437
>gi|118347026|ref|XP_001006990.1| Iron only hydrogenase large subunit, C-terminal domain containing
protein [Tetrahymena thermophila]
gi|89288757|gb|EAR86745.1| Iron only hydrogenase large subunit, C-terminal domain containing
protein [Tetrahymena thermophila SB210]
Length = 488
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 232/465 (49%), Gaps = 105/465 (22%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
FSG +++ LDD+I PSQECI PI +K S +T ++ G Q+ + ++ K+
Sbjct: 2 FSGTIKIASLDDYISPSQECILPI-FDKNSKLKTTEDPTVKAYGMIPQKPDLIKKTAKQT 60
Query: 66 -EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+++L+DCLACSGC+T+AE++L QQS EE + + ++ K V+ ++ Q
Sbjct: 61 AKVTLSDCLACSGCVTTAETILQQQQSVEEFLLKL-----------QSYKHAVVGISQQA 109
Query: 125 VLSLGAKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGP 183
S+ F LS E + L FF+ +L V P
Sbjct: 110 RASMAYHFGLSEEHIQRALTYFFQDQLNV--------------------------QQSVP 143
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ +SECPGW CYAEK+ GEF++PY+S+VKSPQQVMGSL+K LA K+G+ I V++M
Sbjct: 144 VLSSECPGWACYAEKAVGEFVIPYMSQVKSPQQVMGSLVKNSLASKMGIESKDILFVSVM 203
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL----------------------- 280
PCYDKK+E++R +F E G +DVD V+TA E+ LL
Sbjct: 204 PCYDKKVESARKEF--ERNGIKDVDVVLTAQEIMDLLKKVEGQKLVDVQEQIKQAQTNVN 261
Query: 281 -------ANELATTTLQEEKDGILDWPWDEHNPHRMLLVN-------------------- 313
NEL + + ++ I +P++ + R+++ N
Sbjct: 262 NSNDEESKNELISKEREYIENNI--FPYENLDISRIVVSNIEEYLFGDSQTFDQLLLPIL 319
Query: 314 ------GTGSGGYAHNVLSHA---IRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLR 363
GS Y ++ A I L P + ++ K +N D E G L
Sbjct: 320 SNIFDSTIGSNDYLDYIIRRAASDIHHLNPDQYEIIT-KQGKNSDFNEIFLVKDGANILS 378
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
F G RNIQN+I+ L++ + YD+IEIMACPSGCLNGG Q+++
Sbjct: 379 FARVYGLRNIQNIIRNLRQNKCKYDYIEIMACPSGCLNGGGQLKS 423
>gi|392579144|gb|EIW72271.1| hypothetical protein TREMEDRAFT_72706 [Tremella mesenterica DSM
1558]
Length = 701
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 224/443 (50%), Gaps = 75/443 (16%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTG-AKIRIQDDGAY----------IQE 54
FSG L +TDLDDF+ PSQ CI P+ KP G I I + Y ++
Sbjct: 3 FSGALTITDLDDFLTPSQACIIPVRNAKPVKAGNGDTDIHIDANNNYYEVSTYSLSDVKG 62
Query: 55 TNGREEK---LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE---------- 101
NG E L+K EI+L DCLACSGCITS ES+LIT QSH+EV++ I +
Sbjct: 63 VNGAESSKTALEKAEINLNDCLACSGCITSTESLLITMQSHKEVLEFIAQRHPSTCTSET 122
Query: 102 ------NNAHKASSNE--NTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLG-- 151
N +SS+ T+T VLS++ Q + SL A + H + L +R+
Sbjct: 123 PCSSSVNGGCSSSSSHALETRTPVLSISPQTLASLSAAYGAKHNREPIPLLVLLRRIRTL 182
Query: 152 VDL-------VLDVGIAHCFSLVELENEFLDRFLSGGG--------PLFTSECPGWVCYA 196
+DL V D A SL E EF +R + G P+ S CPGWVCYA
Sbjct: 183 LDLKKHGGWKVWDTTFARHVSLKESIQEFEERSENAKGKGVAKPSLPMLASACPGWVCYA 242
Query: 197 EKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD 256
EK+ G+ +LP +S +S Q VMG+L+K +K+ + PS IYHVT MPCYDKKLEASR+D
Sbjct: 243 EKAQGD-MLPLLSATRSSQGVMGALVKQWWGQKMSLEPSQIYHVTAMPCYDKKLEASRSD 301
Query: 257 FYNEELGYRDVDCVITAVELEVLLA------------NELATTTLQEEKDGILDWPWDEH 304
FY+ RDVDCV+T EL++LL + L ++ L L WP
Sbjct: 302 FYSSVHNTRDVDCVLTTGELDLLLQELGFDPYEPVPNDHLPSSPLSTISTAQLPWP---- 357
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF----TCGDV 360
+L G+ S Y ++SH I + P + + + +R D F GDV
Sbjct: 358 ---ELLNHPGSSSDSYLSTIISH-ISNIHPNPTQLT-VRKVRESDDNTEYFLEDTVTGDV 412
Query: 361 TLRFCIANGFRNIQNLIQKLKRK 383
+ GFRN+QNL++++ ++
Sbjct: 413 IFKGARCYGFRNLQNLVRRVGKE 435
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 372 NIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
+++N+ L R DF+E+MACP GC NGG Q++
Sbjct: 478 DVENIFAALGRDSKKLDFVEVMACPGGCANGGGQMK 513
>gi|290994687|ref|XP_002679963.1| nuclear prelamin A recognition factor [Naegleria gruberi]
gi|284093582|gb|EFC47219.1| nuclear prelamin A recognition factor [Naegleria gruberi]
Length = 614
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 185/616 (30%), Positives = 286/616 (46%), Gaps = 157/616 (25%)
Query: 6 FSGVLQLTDLDDFIGPS-QECIKP-------------------------IPIEKPSGPRT 39
S L L DLDDF+ + Q+CIKP + + +
Sbjct: 12 MSTALMLADLDDFLPMNRQDCIKPFLMTNSKSDSTTSSKNITSENGTAAVSVSLDNDDSV 71
Query: 40 GA---------KIRIQDDGAYIQETNGREEKLKKV-EISLTDCLACSGCITSAESVLITQ 89
G +I ++ I N ++ + KK+ +I L DCLACSGC+T+AESVL+ Q
Sbjct: 72 GGVSINRNPTRRIGRSNNRGTINLNNSQQAEPKKIAKIELADCLACSGCVTTAESVLVNQ 131
Query: 90 QSHEEVMKVIRE------------NNAHKASSNENTKTIVLS-----LAIQP----VLSL 128
QS E+ + ++E + + + ++ +I+LS + QP V+++
Sbjct: 132 QSVEQFLTSLKEMKLFSPFIEKIQDKVNVSDLEDDLDSILLSGSKRVVKPQPNSIFVITI 191
Query: 129 GAKFAL---------SHEQVVAKLCGFFK-RLGVDLVLDVG-IAHCFSLVELENEFLDRF 177
+ A S + +++L FK + G V + +A S +EL +FL+R+
Sbjct: 192 SQQSAASLSSYYQCSSVRECLSRLSYLFKVKFGAVAVFETSTLARLVSHLELCEDFLNRY 251
Query: 178 LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK-------THLAEKL 230
G GP+F S CPGW+CYAEK+ E I+P IS VKSPQQ+MG+ +K L+ ++
Sbjct: 252 KEGKGPVFASACPGWICYAEKTQPE-IIPSISTVKSPQQIMGTFVKKFITSNMKQLSNEI 310
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQ 290
+ +YH T+MPC+DKKLEASR DF N+ + VD V+T+ E+ LL EL T +
Sbjct: 311 SLENLKVYHTTVMPCFDKKLEASRPDFTNDP--FDKVDMVLTSSEITELLQKELQIETPE 368
Query: 291 E-----------------------------------EKDGILDWPWDEHNPHRMLLVNGT 315
+ E +L+W E + T
Sbjct: 369 DFIRNTENFIKNEKYQLDSIFEILSQSTHHSTQDISEDATLLEWLGSES--------DAT 420
Query: 316 GSGGYAHNVLSHAIRQL--CPGESPVVEFKPLRNPDIREATFT----CGDVTLRFCIANG 369
GSGGY V +A ++L + F+ RN D RE + LRF IANG
Sbjct: 421 GSGGYCEIVFKYAAKKLFGIDLRDKTLIFESKRNSDYRETVLVDPTDSSKILLRFVIANG 480
Query: 370 FRNIQNLIQKLKR--KRLPYDFIEIMACPSGCLNGGAQIRNEK-------------VASP 414
FRNIQNL++++K+ P+ F+E+MACP GCLNGG Q++ ++ +P
Sbjct: 481 FRNIQNLVRRMKQADNSEPFHFVEVMACPIGCLNGGGQVKVKQPKITLDIDSPSSVTITP 540
Query: 415 KETALELETI----------LCDLAKSEPRENATLEHLYKAWLGGK-STDKGKHMLNTSY 463
K+ + E + LC+ + +E L +LY W+ G + + K +L+T Y
Sbjct: 541 KQHLAQTEKLYRDDISNIKSLCENNSNLVKEG--LNNLYYNWIKGSVGSVQAKSILHTQY 598
Query: 464 HNIPKNNIA--LNVKW 477
H + K NI +KW
Sbjct: 599 HAVEKLNIVTPTALKW 614
>gi|225709820|gb|ACO10756.1| Nuclear prelamin A recognition factor-like protein [Caligus
rogercresseyi]
Length = 342
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 26/357 (7%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M S FSG ++LT LDDFI PS ECIKP+ E S ++I + G ++
Sbjct: 1 MDSRGFSGAIKLTGLDDFITPSLECIKPV--ESSSSKNVQPSVQIWNPG-----DKEKQS 53
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
+ +K ISL DCLAC+GC+T+AESVL+ QS +E+ + ++ + IV+SL
Sbjct: 54 EPQKASISLADCLACAGCVTTAESVLVEAQSTDELRRRLKAKGSL-------YDVIVVSL 106
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL-- 178
+ Q +LSL KF L + + +FK LGVD + ++ SL E E L R
Sbjct: 107 STQSILSLSHKFNLPILESSRLIIHYFKTLGVDYIYNLKTCEDLSLQEQSAELLQRLSES 166
Query: 179 SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK-LGVHPSHI 237
S GGPL +S CPGW+CYAEK+HGE+ILPYISRVKSPQQ+MGSL+K L+ K P I
Sbjct: 167 SKGGPLLSSSCPGWICYAEKTHGEWILPYISRVKSPQQIMGSLLKHWLSHKQFKAPPERI 226
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL 297
HV++MPC+DKKLEASR DF + + G DVD T++ELE ++ ++ + + E +
Sbjct: 227 CHVSVMPCFDKKLEASRRDFTDSQ-GTPDVDLATTSIELEQMMLSDGVSFSPPPEVP-LF 284
Query: 298 DWPWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
D + E + L VN G+G GG +V + I L S V PL+ D ++
Sbjct: 285 DSLFGESSSD--LYVNHGSGFGGACESVFINPITSL----SGXVPSSPLKVQDAEKS 335
>gi|335297201|ref|XP_003357967.1| PREDICTED: nuclear prelamin A recognition factor isoform 2 [Sus
scrofa]
Length = 407
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 194/370 (52%), Gaps = 12/370 (3%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
+ + +S+ Q + AKF+LS +LCGF K LGV V D IA FS++E + EF
Sbjct: 44 RVLAVSVCPQSLPYFAAKFSLSVTDASRRLCGFLKSLGVHYVFDATIAADFSILESQKEF 103
Query: 174 LDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
+ RF P+ TS CPGWV YAE+ G + P++ +SPQQ+MGSL+K + A
Sbjct: 104 VRRFHQHSEEEPALPMLTSACPGWVRYAERVLGHPVTPHLCTARSPQQIMGSLVKDYFAR 163
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTT 288
+ + I+HV + PCYD+KLEA + D G+R DCV+T+ E+ ++ +
Sbjct: 164 RQDLSADRIFHVIVAPCYDRKLEALQEDVPTASPGFRGTDCVLTSGEIAQMMEQSDLSV- 222
Query: 289 LQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNP 348
+D LD + + + +G S G ++ HA ++L + + ++ LRN
Sbjct: 223 ----RDAALDTLFGDVR-EEVRRHDGASSDGCLAHIFRHAAKELFDEDVGELTYRALRNR 277
Query: 349 DIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
D +E T G V LRF A GFRNIQN++ KLKR R PY F+E++AC GCLNG Q +
Sbjct: 278 DFQEVTLEKSGKVLLRFAAAYGFRNIQNVVLKLKRGRFPYHFVEVLACAGGCLNGRGQAQ 337
Query: 408 NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
E + + + + P +A ++ LY+ WL G + + L+T++
Sbjct: 338 TEDGRADRALLQRMRGVHAAGPGRTPETSAHVQDLYREWLDGADAPRARGTLHTAHQGPG 397
Query: 468 KNNIALNVKW 477
+ ++KW
Sbjct: 398 RPADGRDIKW 407
>gi|119500160|ref|XP_001266837.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Neosartorya fischeri NRRL 181]
gi|259511269|sp|A1CWD8.1|NAR1_NEOFI RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|119415002|gb|EAW24940.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Neosartorya fischeri NRRL 181]
Length = 597
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 250/540 (46%), Gaps = 103/540 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAY--IQETNGREEKLK 63
S +L DL+DFI P CIKP+ + + Q + Y +E + E L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPV--------ESLPQKESQSENPYEVTKEDKVQPENLP 52
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI-------------RENNAHKASSN 110
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + + + S++
Sbjct: 53 PAQISLTDCLACSGCVTSAEAVLISLQSHTEVLNTLDLYPELPLDFASDQRGTQNVGSAD 112
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRL-----------GVDLVLDVG 159
+++ V S++ Q SL A + ++ + + F G V+D
Sbjct: 113 SDSRIFVASVSPQVRASLAATYGITEREAKYMIDQFLMGPHGLRAGGKHGNGFTWVVDTN 172
Query: 160 IAHCFSLVELENEFLDRFLSGGG------PLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
+ L +E + LS G P+ +S CPGW+CYAEK+H FILP++SR+KS
Sbjct: 173 VMREAVLALTADEVTNSLLSTGSGSLPKSPILSSACPGWICYAEKTH-PFILPHLSRLKS 231
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN----------EELG 263
PQ + G+ +K+ L++ LGV PS I+H+ +MPC+DKKLEASR + + +
Sbjct: 232 PQALSGTFLKSVLSKALGVSPSQIWHLAIMPCFDKKLEASREELTDIAWASTSAESQTTP 291
Query: 264 YRDVDCVITAVELEVLLA-----------NELATTTLQEEKDGILDWPWDEHNPHRMLLV 312
RDVDCVIT EL L + L + D LD + +
Sbjct: 292 VRDVDCVITTRELLTLASARGLSLPNLPLKALPASCSTPFPDQALDSFLFSKSSSDQTVE 351
Query: 313 NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGD-VTLRFCIANGF 370
+GT SGGY H+VL + PG V + RN D+ E + GD L+ GF
Sbjct: 352 SGT-SGGYLHHVL-KIFQARNPGSKIVTQRG--RNADVVEYVLMSSGDEPLLKAARYYGF 407
Query: 371 RNIQNLIQKLKR---KRLP-----------------------------YDFIEIMACPSG 398
RNIQNL++KLK RLP Y ++E+MACP G
Sbjct: 408 RNIQNLVRKLKPARVSRLPGAKPQAVTSSANRRQPMSRNAAPAGTGADYAYVEVMACPGG 467
Query: 399 CLNGGAQIRNEKVASPKETALELETILCDLAKSEP---RENATLEHLYKAWLGGKSTDKG 455
C NGG QIR E AL+ + +A S+P + A L + +A+ S +G
Sbjct: 468 CTNGGGQIRIEDAREAVPNALKETSTETPVAASKPTPHEQRARLARVDEAYYSADSDSEG 527
>gi|448508753|ref|XP_003865997.1| Nar1 cytosolic iron-sulfur (FeS) protein assembly machinery protein
[Candida orthopsilosis Co 90-125]
gi|380350335|emb|CCG20556.1| Nar1 cytosolic iron-sulfur (FeS) protein assembly machinery protein
[Candida orthopsilosis Co 90-125]
Length = 533
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 226/470 (48%), Gaps = 75/470 (15%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTG---AKIRIQDDGA--YIQETNGR 58
S S +L DL+DFI P CIKP+ + G +I+I +G I + +G+
Sbjct: 14 STMSAILSADDLNDFISPGVACIKPVQDTNTNQEANGNGEVEIQIDSEGNPLEISKIDGK 73
Query: 59 EEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVL 118
+ L +ISL DCLACSGCITSAE VL+ Q SH E++K ++ + K V
Sbjct: 74 QTNLSPAQISLADCLACSGCITSAEEVLVAQHSHHELVKALKLQD----------KIFVA 123
Query: 119 SLAIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRF 177
S++ Q SL + L E + L ++G V+ + SL+ +
Sbjct: 124 SISQQSRASLATAYNLPVETIDKLLIDLLVNQMGFKYVVGTSLGRKLSLINEAQHVITNR 183
Query: 178 LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
G P+ +S CPGWV YAEK+H ++LP IS VKS QQ+ G L+KT A V S +
Sbjct: 184 GKGSNPILSSICPGWVLYAEKTH-PYVLPMISTVKSAQQITGCLLKTLTAHDFHVQKSQV 242
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL---------ATTT 288
YH+++MPC+DKKLE++R + + + + DVDCV+TA EL LL E
Sbjct: 243 YHLSIMPCFDKKLESARPEIFGDTIP--DVDCVLTAKELIALLEEESYQLVPKVNPPIVN 300
Query: 289 LQEEKDGIL----DWPWDEHNPHRMLLVN--GTGSGGYAHNVLS--HAIRQLCPGESPVV 340
L E L DWP+ +++ N G+ SGGYA N L L +
Sbjct: 301 LPTEDVYSLVAPNDWPYVQYS-----WTNDPGSASGGYAFNYLRCLQEDMMLKGHDESGF 355
Query: 341 EFKPLR--NPDIREATFTCG-DVTLRFCIANGFRNIQNLIQKLK--------------RK 383
K +R N D+ E + D I NGFRNIQNL++KLK R+
Sbjct: 356 SMKIIRGKNSDVYEMRLSYKEDKVASAAIVNGFRNIQNLVRKLKPNGKATGRVNPLAARR 415
Query: 384 RL-----------------PYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
R D++EIMACPSGC+NGG QI K S K+
Sbjct: 416 RTRIKNSESTPVEETADPSKVDYVEIMACPSGCINGGGQINPPKDVSEKD 465
>gi|71017002|ref|XP_758949.1| hypothetical protein UM02802.1 [Ustilago maydis 521]
gi|74702333|sp|Q4PAR1.1|NAR1_USTMA RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|46098480|gb|EAK83713.1| hypothetical protein UM02802.1 [Ustilago maydis 521]
Length = 827
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 241/505 (47%), Gaps = 136/505 (26%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-PIEKPS---------GPRTGAKIRIQDDGAYIQ-- 53
FSG L LTDL+D++GPSQ CIKP+ + PS I I DGAY +
Sbjct: 3 FSGALTLTDLNDYLGPSQACIKPVQAADVPSQDHSDVSALAASASTHIAIDHDGAYYESS 62
Query: 54 ----------ETNGREE-KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIREN 102
++ R+ KL+ +ISL DCLACSGC+TSAESVLIT QS +E+ + I E
Sbjct: 63 TPPSSSLSAADSRPRQRTKLETAQISLNDCLACSGCVTSAESVLITMQSQDEMRRAIAEL 122
Query: 103 NAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQ----------------VVAKLCGF 146
N SN N K +V S++ Q + SL AK+ H Q ++ ++ F
Sbjct: 123 N----QSNAN-KLVVASISTQSLASLSAKYTFQHPQPSSSRSASTSTLPLRVLLHRISYF 177
Query: 147 FKRL-GVDLVLDVGIAHCFSLVELENEFLDRF--------LSGGG--------------- 182
K + G D V D A +L E + EF R LS
Sbjct: 178 LKTVFGFDHVYDTTFARHIALKEHQREFFQRRENARKRAKLSNAPADDDDRLHPDQVDGP 237
Query: 183 --PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV-------H 233
P+ S CPGW+CYAEK+HGE +LPYIS KSPQQV G + K L E+LG+
Sbjct: 238 TLPMLASACPGWICYAEKTHGE-LLPYISTTKSPQQVAGVIAKRFLPERLGLLAPSAPDQ 296
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELAT--TTLQE 291
PS IYHVT+MPCYDKKLEASR DFY++ G ++VDCV+T EL+ L+ +E T +
Sbjct: 297 PS-IYHVTVMPCYDKKLEASRPDFYDDITGTKEVDCVLTTGELDKLMLDEAFDICTPVPG 355
Query: 292 EKDGI--------LDWPWDEHNPH----------------RMLLVNGTGSGGYAH----- 322
E++ I L ++ NP ++L G+ SGGY
Sbjct: 356 EQEAIQESIAELSLQQAFNTPNPDVGSASVSMMPRLPRLPQLLDQPGSSSGGYLFLLMRA 415
Query: 323 ----------NVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT--------CGDVT--- 361
+ L ++R+ G P ++ + +R D E C D T
Sbjct: 416 VWLDWISVHWDSLPLSVRE--QGILPKLDVRVIRTTDFTEFVLRAPTQLVEPCNDDTSQS 473
Query: 362 ---LRFCIANGFRNIQNLIQKLKRK 383
R GFRN+QNL++KL+++
Sbjct: 474 SILFRGAQCYGFRNLQNLVRKLQKQ 498
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/21 (76%), Positives = 20/21 (95%)
Query: 387 YDFIEIMACPSGCLNGGAQIR 407
YD++E+MACPSGC+NGG QIR
Sbjct: 583 YDYVEVMACPSGCVNGGGQIR 603
>gi|255947558|ref|XP_002564546.1| Pc22g05110 [Penicillium chrysogenum Wisconsin 54-1255]
gi|259511270|sp|B6HUC4.1|NAR1_PENCW RecName: Full=Cytosolic Fe-S cluster assembly factor nar1; AltName:
Full=Nuclear architecture-related protein 1
gi|211591563|emb|CAP97799.1| Pc22g05110 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 604
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 236/500 (47%), Gaps = 109/500 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEKLKK 64
S +L DL+DFI P CIKP+ P + Q+D + E + E L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPPK------DTKNQEDAYEVTTEDKVQPEDLPP 54
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIREN------------NAHKASSNEN 112
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + + + ++
Sbjct: 55 AQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAHPEIPLTHEPHGVGVNNTEDSKE 114
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQ---VVAKLCGFFKRL--------GVDLVLDVGIA 161
K V S++ Q SL + +S ++ ++ +L + L G V+D
Sbjct: 115 GKIFVASVSPQVRASLATTYGISEKEAGYMIDQLLSGPQGLRGGGKHGNGFTWVVDTNAM 174
Query: 162 HCFSLVELENEFLDRFLSGGG-------------PLFTSECPGWVCYAEKSHGEFILPYI 208
LV +E D SG P+ +S CPGW+CYAEK+H FILP++
Sbjct: 175 REAVLVLTADEVSDSLNSGESSAMSQSDDSLPKRPILSSACPGWICYAEKTH-PFILPHL 233
Query: 209 SRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN--------- 259
SR+KSPQ + G+ +KT L++ LGVHPS I+H+ +MPC+DKKLEASR + +
Sbjct: 234 SRLKSPQALSGTFLKTVLSKSLGVHPSRIWHLAVMPCFDKKLEASREELTDMSWRQGDSS 293
Query: 260 --EELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRML------- 310
E RDVDCVITA EL L ++ ++L++ L ++ P + L
Sbjct: 294 GSESQPVRDVDCVITARELLSLASSR--GSSLRDLPLQPLHSSFNPPFPEKTLDSFLSLK 351
Query: 311 -------LVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVT 361
L GT SGGY H+VL + PG VV RN D+ E G
Sbjct: 352 RSRAEQSLATGT-SGGYLHHVL-MTFQARNPGSELVVNRG--RNVDVVEYVLMSPEGQPI 407
Query: 362 LRFCIANGFRNIQNLIQKLKR---KRLP-----------------------------YDF 389
L+ GFRNIQNL++KLK RLP Y +
Sbjct: 408 LKAARYYGFRNIQNLVRKLKPARVSRLPGAKPAVRPAAGRRQPMSRNAVSTGSSGSDYAY 467
Query: 390 IEIMACPSGCLNGGAQIRNE 409
+E+MACP GC NGG QIR E
Sbjct: 468 VEVMACPGGCTNGGGQIRVE 487
>gi|320582179|gb|EFW96397.1| nuclear architecture related protein [Ogataea parapolymorpha DL-1]
Length = 507
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 227/463 (49%), Gaps = 72/463 (15%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIE--KPSGPRTGAKIRIQDDGAYIQ-ETNGREEKL 62
S +L DL+DFI P C+KP+ K + R I+I G ++ E +G +L
Sbjct: 1 MSAILSADDLNDFITPGVACVKPVESSNAKKADGRGPVDIQIDAQGNALEVEIDGSSSRL 60
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
++ +ISL DCLACSGCITSAE VL+ Q SH+E++ +++ + + K V+S++
Sbjct: 61 QEAQISLADCLACSGCITSAEEVLVAQHSHKELINALKQ--------DRHNKKFVMSISH 112
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
Q SL A L+ EQV L F LG V+ G+ + L ++ ++ +G
Sbjct: 113 QSRASLAAALKLTIEQVDKMLIHLFVNHLGFVSVVGTGLGRVIATDTLAHDIVEGKQNGA 172
Query: 182 -GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
GP+ TS CPGWV YAEK+H ILP +S VKSPQQ+ G + K + + +YH+
Sbjct: 173 QGPVLTSICPGWVLYAEKTH-PHILPKLSTVKSPQQITGCIFKRLIGRQYSCSLDQVYHL 231
Query: 241 TLMPCYDKKLEASRADFYNEELGYR-DVDCVITAVELEVLLANE---LATTTLQEEKDGI 296
++MPC+DKKLEA+R + +E G DVDCVIT EL LL +E + + E D
Sbjct: 232 SIMPCFDKKLEAARPE--HETPGEAPDVDCVITPRELIQLLQDEKINIDKIIKEVEHDAT 289
Query: 297 -----------LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPL 345
DWP E L G+ SGGYA L H + E+ +
Sbjct: 290 PISHIYEQYAPRDWPDAE---AAWLNCEGSSSGGYALQYLLHLQKM---HENTEIRTING 343
Query: 346 RNPDIREATFTCGDVTLRFC-IANGFRNIQNLIQKLKRKRLPY----------------- 387
RNPDI E G L + NGF+NIQNL++KLK
Sbjct: 344 RNPDIYELRLVRGSEVLATAGVVNGFKNIQNLVRKLKNGSTRVSGGLAARRRARMAQDAG 403
Query: 388 ------------DFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
D +E+MACP GC+NGG QI + P E A
Sbjct: 404 EKQETGPEVHKCDLVEVMACPGGCINGGGQI-----SGPAEVA 441
>gi|358398690|gb|EHK48041.1| hypothetical protein TRIATDRAFT_81910 [Trichoderma atroviride IMI
206040]
Length = 578
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 235/480 (48%), Gaps = 89/480 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGA--KIRIQDDGAYIQETNGREEKLK 63
S +L DL+DFI P CIKP+ P+ P A + + DG + ++
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVET-LPALPAQQAANEYEVVLDGQHPSSSSA--NGAS 57
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASS-------------N 110
+ISLTDCLACSGC+TSAE++L++ QSH EV+ + A + N
Sbjct: 58 PAQISLTDCLACSGCVTSAEAILVSLQSHSEVISTLDAAPALRVVGPDAQGNFKVEGLEN 117
Query: 111 ENTKTIVLSLAIQPVLSLGAKFA--LSHEQVVAKLCGFFK-----------RLGVDLVLD 157
E+ K V S++ Q +L A +S Q L + + V+D
Sbjct: 118 EDAKLFVASVSSQTRANLAAACGREVSESQAGHMLENLLRGPEGLAKGGKWNNSFEWVVD 177
Query: 158 VGIAHCFSLVELENEFLDRFLSG----GGPLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
+ +A +L E L G P+ +S CPGWVCYAEK+H ++LP++S+VKS
Sbjct: 178 INVARDATLALGTAEVLSSPTPGVSAPSTPILSSSCPGWVCYAEKTH-PYVLPHLSKVKS 236
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL--------GYR 265
PQ +MG+++KT L+ KLG+ P+ I+HV +MPC+DKKLEASR + +E G R
Sbjct: 237 PQALMGTILKTTLSRKLGIPPNRIWHVAVMPCFDKKLEASREELTDEVWARSGLPGRGVR 296
Query: 266 DVDCVITAVELEVLLANE-LATTTLQEEKDGI---LDWPWDE-----------HNPHRML 310
DVDCVIT+ E+ +L + L+ Q+ + + +P D+ NP R+
Sbjct: 297 DVDCVITSKEVLMLAESRGLSFFDFQKSASSVPPSIPFPDDKVHAFLFPKKGSRNPSRI- 355
Query: 311 LVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANG 369
SGG H++L Q+ E ++ RN D+ E + T G+ + G
Sbjct: 356 ---AGSSGGLLHHILQTKAAQIAGSE---IQINRGRNADVVEYSVTVNGEPVFKAARYYG 409
Query: 370 FRNIQNLIQKLKRKR----------------------LPYDFIEIMACPSGCLNGGAQIR 407
FRNIQNL+++LK R L + F+E+MACP GC NGG QI+
Sbjct: 410 FRNIQNLVRRLKPARPSRMPGGKPFGSARRPAGKAASLDFSFVEVMACPGGCTNGGGQIK 469
>gi|116181550|ref|XP_001220624.1| hypothetical protein CHGG_01403 [Chaetomium globosum CBS 148.51]
gi|121790764|sp|Q2HEF1.1|NAR1_CHAGB RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|88185700|gb|EAQ93168.1| hypothetical protein CHGG_01403 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 234/479 (48%), Gaps = 82/479 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI------PIEKPSGPRTGAKIRIQDDGAYIQETNGRE 59
S +L DL+DFI P CIKPI P + S + + DG +
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPTQPGPEQSQQPQSLEFEVILDGQQPTTGSSSN 60
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVM---------KVIRENNAHKASS- 109
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ +VI++++ S
Sbjct: 61 GTTPPAQISLTDCLACSGCVTSAEAVLVSLQSHNEVLTLLDAAPALRVIQDSDGKPVVSG 120
Query: 110 --NENTKTIVLSLAIQPVLSLGAK--FALSHEQV----------VAKLCGFFKRL-GVDL 154
N K V S++ Q SL A A++ +Q A L G K G
Sbjct: 121 LENPEAKLFVASVSPQTRASLAAACGGAVTEQQAGWMIEQLLMGPAGLAGGGKHGNGFTW 180
Query: 155 VLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYIS 209
V+D A L+ +E L GG P+ TS CPGWVCYAEK+H ++LP++S
Sbjct: 181 VVDTNTAREACLMLGSDEVLGGGSWGGSDKPTSPILTSSCPGWVCYAEKTH-PYVLPHLS 239
Query: 210 RVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL------- 262
RVKSPQ +MG+L+KT L+ LG+ P ++H+ +MPC+DKKLEASR + +
Sbjct: 240 RVKSPQALMGTLLKTTLSRVLGIAPDRVWHLAVMPCFDKKLEASREELTDTAWGSGGVPG 299
Query: 263 -GYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP-WDEHNPHRML--------LV 312
G RDVDCVIT+ E+ ++LA K + P + + + HR L L
Sbjct: 300 RGVRDVDCVITSKEI-LMLAASKGVDFFGLAKSAPVKQPMFPDSDIHRFLFPAQRRKQLR 358
Query: 313 NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--TCGDVTLRFCIANGF 370
+G SGG H ++ + + + ++ RN D+ E + G+ + GF
Sbjct: 359 DGGTSGGNLHYIIQDVLSKHAGSQ---IQMTRGRNADVVEFAVLSSSGETIFKAARYYGF 415
Query: 371 RNIQNLIQKL---KRKRLP-------------------YDFIEIMACPSGCLNGGAQIR 407
RNIQNL++KL K R+P + ++E+MACP GC NGG QI+
Sbjct: 416 RNIQNLVRKLKPAKASRMPGGKPFGSARRPAGKSATLEHSYVEVMACPGGCTNGGGQIK 474
>gi|121708183|ref|XP_001272053.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Aspergillus clavatus NRRL 1]
gi|259511263|sp|A1CIC2.1|NAR1_ASPCL RecName: Full=Cytosolic Fe-S cluster assembly factor nar1; AltName:
Full=Nuclear architecture-related protein 1
gi|119400201|gb|EAW10627.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Aspergillus clavatus NRRL 1]
Length = 597
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 247/532 (46%), Gaps = 109/532 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAY--IQETNGREEKLK 63
S +L DL+DFI P CIKP+ T + Q + Y +E + E L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPV--------ETLPQKESQSENPYEVTKEDKIQPENLP 52
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI-------------RENNAHKASSN 110
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + +++ +++
Sbjct: 53 PAQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAYPEFRLSNESGQDDIKTTETAD 112
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFK-----------RLGVDLVLDVG 159
++ V S++ Q SL + +S + + F G V+D
Sbjct: 113 SESRVFVASVSPQVRASLATTYGISEREAQCMIDQFLSGSQGLRAGGKFHNGFAWVVDTN 172
Query: 160 IAHCFSLVELENEFLDRFLS-------GGGPLFTSECPGWVCYAEKSHGEFILPYISRVK 212
L +E + S P+ +S CPGW+CYAEK+H FILP++SR+K
Sbjct: 173 TMREAVLALTADEVANSLTSIDPLNTLPKRPILSSACPGWICYAEKTH-PFILPHLSRLK 231
Query: 213 SPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELG--------- 263
SPQ + G+L+K+ L++ LG+ P+ I+H+ +MPC+DKKLEASR + + G
Sbjct: 232 SPQALTGTLLKSVLSKALGISPTRIWHLAIMPCFDKKLEASREELTDSAWGPTPSEPHTP 291
Query: 264 YRDVDCVITAVELEVLLANELATTTLQEEKDGILDW--PWDEHNPHRMLL---------V 312
RDVDCVIT+ EL L A+ + K + P+ + + L
Sbjct: 292 VRDVDCVITSRELLTLAASRGISLPRLPLKPLPRSYYSPFPDRSLDSFLFSKRSSGQTAA 351
Query: 313 NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVTLRFCIANGF 370
+GT SGGY H+VL+ + PG V + RN D+ E G+ L+ GF
Sbjct: 352 SGT-SGGYLHHVLT-TFQAKNPGSQIVTQRG--RNADVVEYVLMSPGGEPLLKAARYYGF 407
Query: 371 RNIQNLIQKLK---RKRLP-----------------------------YDFIEIMACPSG 398
RNIQNL++KLK RLP Y ++E+MACP G
Sbjct: 408 RNIQNLVRKLKPARASRLPGARQSATSAGGSRRQLASRNAASAGSGTDYAYVEVMACPGG 467
Query: 399 CLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENA--TLEHLYKAWLG 448
C NGG Q+R E A E + + +++EP E A H +AWL
Sbjct: 468 CTNGGGQVRIED-------AREAASNMSVESQTEPPEAALKPTPHEQRAWLA 512
>gi|449305199|gb|EMD01206.1| hypothetical protein BAUCODRAFT_29654 [Baudoinia compniacensis UAMH
10762]
Length = 602
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 164/491 (33%), Positives = 235/491 (47%), Gaps = 96/491 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P ++P ++ +D
Sbjct: 1 MSAILSADDLNDFINPGVACIKPVETLPKQQPDNASDTYEVTTED--------RANSGTA 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI---RE-----NNAHKASSNENTK 114
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + RE +A + K
Sbjct: 53 PPAQISLTDCLACSGCVTSAEAVLVSLQSHGEVLDTLDRYRELRAPWMDATDGGDTSDAK 112
Query: 115 TIVLSLAIQPVLSLGAKFALSHEQ---VVAKL--------CGFFKRLGVDLVLDVGIAHC 163
V S++ Q SL A + ++ + ++++L G + G +D
Sbjct: 113 VFVASVSPQARASLAATYNITEREAGYMISQLLSGPHGLRSGGAQGAGFTWTIDTNAMRE 172
Query: 164 FSLVELENEFLDRFLSGGG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMG 219
+LV +E F + P+ TS CPGW+CYAEK+H ILP++S++KSPQ + G
Sbjct: 173 VALVAAADEAQQAFNAPSDGLKRPVLTSACPGWICYAEKTHAH-ILPHLSKLKSPQALTG 231
Query: 220 SLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN------EELGYRDVDCVITA 273
+LIKT LA+K G+ P ++H+ +MPC+DKKLEASR + + E RDVDCVITA
Sbjct: 232 TLIKTVLAKKFGIPPEKVWHMAVMPCFDKKLEASRGELTSHTWHGQEGDAVRDVDCVITA 291
Query: 274 VELEVLLANE------LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG----------- 316
EL +L + L L E+ P+ + N R L G
Sbjct: 292 RELLMLAESRNIRFPNLPRAPLSEQ----YAPPFPDANVDRFLNSRRRGHKRKREEADAE 347
Query: 317 ---SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--TCGDVTLRFCIANGFR 371
SGGY H+VL + L PG ++ RN D+ E + G R GFR
Sbjct: 348 IGTSGGYLHHVL-KTQQALHPGS--ILSRHRGRNVDVSEYAVLSSSGQEVFRAARYYGFR 404
Query: 372 NIQNLIQKL---KRKRLP-----------------------YDFIEIMACPSGCLNGGAQ 405
NIQNL+++L K RLP Y ++E+MACP GC NGG Q
Sbjct: 405 NIQNLVRRLKPAKASRLPGATRKPGGARKPGAASGGTNEGEYAYVEVMACPGGCTNGGGQ 464
Query: 406 IRNEKVASPKE 416
I+ VA+ ++
Sbjct: 465 IKVGDVATLRQ 475
>gi|85117692|ref|XP_965304.1| hypothetical protein NCU03204 [Neurospora crassa OR74A]
gi|74618782|sp|Q7SGW5.1|NAR1_NEUCR RecName: Full=Cytosolic Fe-S cluster assembly factor nar-1;
AltName: Full=Nuclear architecture-related protein 1
gi|28927111|gb|EAA36068.1| hypothetical protein NCU03204 [Neurospora crassa OR74A]
Length = 581
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 233/479 (48%), Gaps = 87/479 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGA-----KIRIQDDGAYIQETNGREE 60
S +L + DL+DFI P CIKPI + P G ++ + DG Q+ +
Sbjct: 1 MSAILSVDDLNDFISPGVACIKPIETLPTAAPPAGDANSSLEVEVILDG---QQPEAKSN 57
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE-----------NNAHKASS 109
EISLTDCLACSGC+TSAE+VL++ QSH EV+ ++ N H
Sbjct: 58 A-PPAEISLTDCLACSGCVTSAEAVLVSLQSHNEVLNMLDSAPALKLVGPDANGKHSVQG 116
Query: 110 NENT--KTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCG--FFKRLGV----------DL 154
EN+ K V S++ Q SL A EQ ++ F G+
Sbjct: 117 LENSDAKLYVASVSPQSRASLAAACGNGVTEQQAGRMIEQLFLGEQGLARGGKWGNKFTW 176
Query: 155 VLDVGIAHCFSLVELENEFLDRFLS----GGGPLFTSECPGWVCYAEKSHGEFILPYISR 210
V+D A +LV +E L ++ P+ T+ CPGWVCYAEK+H ++LP++SR
Sbjct: 177 VVDTNTAREATLVLGSDEVLGGLIAPSDKAATPVLTASCPGWVCYAEKTH-PYVLPHLSR 235
Query: 211 VKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL-------- 262
VKSPQ +MG+L+KT L+ L + P I+H+ +MPC+DKKLEASR + +
Sbjct: 236 VKSPQALMGTLLKTSLSRILDIAPERIWHLAVMPCFDKKLEASREELTDAVWAGDGKPGR 295
Query: 263 GYRDVDCVITAVELEVLLANE----------LATTTLQEEKDGILDWPWDEHNPHRMLLV 312
G RDVDCVIT+ E+ +L A+ + T + I D+ + HR
Sbjct: 296 GVRDVDCVITSKEVLMLAASRGFDFFSLSASMPPQTPRFPDQLIHDFLF--RPGHRQQSR 353
Query: 313 NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVTLRFCIANGF 370
SGG H +L H ++ PG ++ P RN D+ E G+V + GF
Sbjct: 354 EAGTSGGNMHFILRH-LQAKNPGSQ--IQTVPGRNADVVEYKLIAEAGEVMFKAARYYGF 410
Query: 371 RNIQNLIQKLK---RKRLP-------------------YDFIEIMACPSGCLNGGAQIR 407
RNIQNL++KLK R+P Y ++E+MACP GC NGG QI+
Sbjct: 411 RNIQNLVRKLKPAKTSRMPGGKPFGSAKRPAGKASGLDYGYVEVMACPGGCTNGGGQIK 469
>gi|336464368|gb|EGO52608.1| hypothetical protein NEUTE1DRAFT_91105 [Neurospora tetrasperma FGSC
2508]
Length = 581
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 233/479 (48%), Gaps = 87/479 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEK- 61
S +L + DL+DFI P CIKPI P PS + + ++ I + E K
Sbjct: 1 MSAILSVDDLNDFISPGVACIKPIETLPTAAPSAGDVNSSLEVE----VILDGQQPEAKS 56
Query: 62 -LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHK-------------A 107
EI LTDCLACSGC+TSAE+VL++ QSH EV+ ++ A K
Sbjct: 57 NAPPAEILLTDCLACSGCVTSAEAVLVSLQSHNEVLNMLDSAPALKLVGPDANGKYSVEG 116
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFA--LSHEQVVAKLCGFF------KRLG-----VDL 154
N + K V S++ Q SL A ++ +Q + F R G
Sbjct: 117 LENSDAKLYVASVSPQSRASLAAACGNGVTEQQADRMIEQLFLGEQGLARGGKWGNKFTW 176
Query: 155 VLDVGIAHCFSLVELENEFLDRFLS----GGGPLFTSECPGWVCYAEKSHGEFILPYISR 210
V+D A +LV +E L ++ P+ T+ CPGWVCYAEK+H ++LP++SR
Sbjct: 177 VVDTNTAREATLVLGSDEVLGGLIAPSDKAATPVLTASCPGWVCYAEKTH-PYVLPHLSR 235
Query: 211 VKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL-------- 262
VKSPQ +MG+L+KT L+ L + P I+H+ +MPC+DKKLEASR + +
Sbjct: 236 VKSPQALMGTLLKTSLSRILDIAPERIWHLAVMPCFDKKLEASREELTDAVWAGDGKPGR 295
Query: 263 GYRDVDCVITAVELEVLLANE----------LATTTLQEEKDGILDWPWDEHNPHRMLLV 312
G RDVDCVIT+ E+ +L A+ + T + I D+ + HR
Sbjct: 296 GVRDVDCVITSKEVLMLAASRGYDFFSLSASMPPQTPRFPDQLIHDFLF--RPGHRQQSR 353
Query: 313 NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVTLRFCIANGF 370
SGG H +L H ++ PG ++ P RN D+ E T G+V + GF
Sbjct: 354 EAGTSGGNMHFILRH-LQAKNPGSQ--IQTVPGRNADVVEYKLTAEAGEVMFKAARYYGF 410
Query: 371 RNIQNLIQKLK---RKRLP-------------------YDFIEIMACPSGCLNGGAQIR 407
RNIQNL++KLK R+P Y ++E+MACP GC NGG QI+
Sbjct: 411 RNIQNLVRKLKPAKASRMPGGKPFGSAKRPAGKASGLDYGYVEVMACPGGCTNGGGQIK 469
>gi|354544881|emb|CCE41606.1| hypothetical protein CPAR2_801580 [Candida parapsilosis]
Length = 518
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 227/463 (49%), Gaps = 65/463 (14%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDG--AYIQETNGREE 60
S +L DL+DFI P CIKP+ P S +I+I +G I + +G++
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVQDVPASHESNESGEVEIQIDSEGNPLEISKIDGKQT 60
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
L +ISL DCLACSGCITSAE VL+ Q SH+E++K ++ + K V S+
Sbjct: 61 SLTPAQISLADCLACSGCITSAEEVLVAQHSHQELVKALKLKD----------KIFVASI 110
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q SL + L E + L ++G V+ + FSL+ +
Sbjct: 111 SQQSRASLAMAYDLPVETIDKLLVNLLADQMGFQKVVGTSLGRKFSLINEAKYVMANRGK 170
Query: 180 GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
P+ +S CPGWV YAEK+H ++LP IS VKS QQ+ G L+KT A++ V S +YH
Sbjct: 171 DSKPILSSICPGWVLYAEKTH-PYVLPMISPVKSAQQITGCLLKTLTADEFHVPKSQVYH 229
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-------LATTTLQEE 292
+++MPC+DKKLE++R + + + + DVDCV+T EL LL E + +L
Sbjct: 230 LSIMPCFDKKLESARPEIFGDTIP--DVDCVLTPKELIALLEEENYQLVPKIEPKSLTLP 287
Query: 293 KDGILDWPWDEHNPH-RMLLVN--GTGSGGYAHNVLSHAIRQLCPGESPVVEFK----PL 345
+ + D ++ P+ R N G+ SGGYA N L L +F
Sbjct: 288 IEEVYDLVAPKYWPYPRYSWTNDPGSSSGGYAFNYLRFFQNDLISKGYNESDFSMKVISG 347
Query: 346 RNPDIREATFTCGDVTL-RFCIANGFRNIQNLIQKLK----------------RKRL--- 385
+N D+ E + + I NGFRNIQNL++KLK R R+
Sbjct: 348 KNSDVFEMRLMYKEERVASAAIVNGFRNIQNLVRKLKPNAKTVGRVNPLAARRRARMKEP 407
Query: 386 ------------PYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
D++EIMACPSGC+NGG QI+ S K+
Sbjct: 408 ESTSVEETADPSKVDYVEIMACPSGCINGGGQIKPPNDVSEKD 450
>gi|301612957|ref|XP_002935994.1| PREDICTED: nuclear prelamin A recognition factor [Xenopus
(Silurana) tropicalis]
Length = 370
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 186/334 (55%), Gaps = 9/334 (2%)
Query: 150 LGVDLVLDVGIAHCFSLVELENEFLDRFLSG-----GGPLFTSECPGWVCYAEKSHGEFI 204
L V VLD IA FS++E + +F+ RF P+F S CPGWV YAE+ G+ +
Sbjct: 40 LRVHHVLDTTIAADFSILETQRDFIQRFRRQTQDEHAFPMFASACPGWVQYAERVLGDSV 99
Query: 205 LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGY 264
P+I KSPQQ+MGSL+K + A + P I+H+ + PCYD+KLEA R D+Y E
Sbjct: 100 TPHICTAKSPQQIMGSLVKGYFASSKNLSPDKIFHLMVAPCYDRKLEALRDDYYTELFNC 159
Query: 265 RDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNV 324
RDVDCV+T+ EV+ E +++E ++ L+ + E + GT S GY +V
Sbjct: 160 RDVDCVLTSG--EVMQIMEQKNISVKEMEEIPLENVFGE-TSFEFVRHEGTSSDGYLAHV 216
Query: 325 LSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRK 383
HA ++L + + +K L+N D E + G+ LRF A GFRNIQN++ KL++
Sbjct: 217 FRHAAKELFDMDVQEISYKALKNKDFLEVSLEKDGETVLRFAAAYGFRNIQNMVLKLRKG 276
Query: 384 RLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLY 443
+ Y F+E++ACP GCLNG Q ++ + + E+E + + +P N ++ LY
Sbjct: 277 KFHYHFVEVLACPGGCLNGKGQAQSTEGKVERALLHEMEEVYTRVPIQKPESNPHIQALY 336
Query: 444 KAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+ WL G + K + L+T ++ L++KW
Sbjct: 337 EDWLQGADSQKTRETLHTRIVASAQSAARLDMKW 370
>gi|358387153|gb|EHK24748.1| hypothetical protein TRIVIDRAFT_208599 [Trichoderma virens Gv29-8]
Length = 515
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 229/478 (47%), Gaps = 89/478 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKPI P+ P+ A ++ +
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIET-LPAAPQQSA----NENEVILDGQQPSASAATPA 55
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASS-------------NEN 112
+ISLTDCLACSGC+TSAE++L++ QSH EV+ + A + NE+
Sbjct: 56 QISLTDCLACSGCVTSAEAILVSLQSHTEVISTLDAAPALRVVGPDASGNFTVEGLENED 115
Query: 113 TKTIVLSLAIQPVLSLGAKFA--LSHEQVVAKLCGFFK-----------RLGVDLVLDVG 159
K V S++ Q +L A +S Q L + + V+D+
Sbjct: 116 AKLFVASVSSQTRANLAAACGRDVSESQAGYMLENLLRGPDGLAKGGKWNTSFEWVVDIN 175
Query: 160 IAHCFSLVELENEFLDRFLSG----GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
+A +L E L G P+ S CPGWVCYAEK+H ++LP++S+VKSPQ
Sbjct: 176 VARDATLALSAAEVLSSPTPGVSRPSQPILASSCPGWVCYAEKTH-PYVLPHLSKVKSPQ 234
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL--------GYRDV 267
+MG+++KT L+ KLG+ PS I+HV +MPC+DKKLEASR + +E G RDV
Sbjct: 235 ALMGTILKTSLSRKLGIPPSRIWHVAIMPCFDKKLEASREELTDEVWARSGLPGKGIRDV 294
Query: 268 DCVITAVELEVLL-------------ANEL-ATTTLQEEKDGILDWPWD-EHNPHRMLLV 312
DCVIT+ E+ +L A+ L + +EK +P NP R V
Sbjct: 295 DCVITSKEVLMLAESRGLDFFTFSKSASSLPPSIPFPDEKIQAFLFPSKGSRNPSR---V 351
Query: 313 NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFR 371
G+ SGG H++L Q E +V RN D+ E T G+ + GFR
Sbjct: 352 AGS-SGGLLHHILQTRAAQTPGSEIQIVRG---RNVDVIEYFVTVNGEPIFKAARYYGFR 407
Query: 372 NIQNLIQKLKRKR----------------------LPYDFIEIMACPSGCLNGGAQIR 407
NIQNL+++LK R L Y ++E+MACP GC NGG QI+
Sbjct: 408 NIQNLVRRLKPARPSRMPGGKPFGSARRPAGKAASLDYGYVEVMACPGGCTNGGGQIK 465
>gi|310790892|gb|EFQ26425.1| iron only hydrogenase large subunit domain-containing protein
[Glomerella graminicola M1.001]
Length = 585
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 167/475 (35%), Positives = 232/475 (48%), Gaps = 79/475 (16%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKPI PS P ++ + + +
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIET-LPSAPPPSQDPSLEHEVILDGQPSSAAANAPPA 59
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHK-------------ASSNEN 112
EISLTDCLACSGC+TSAE+VL++ QSH EV+ + A + +E+
Sbjct: 60 EISLTDCLACSGCVTSAEAVLVSMQSHTEVLHTLDFGPALRIVGPDDDGQFRVDGLEDES 119
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQ-----VVAKLCGFFKRL--------GVDLVLDVG 159
+ V S++ Q SL A + ++ +L G L G VLD
Sbjct: 120 RRLFVASVSPQTRASLAAAAGKGTTEKEAGHMLERLLGGPDGLASAGKHNNGFTWVLDTN 179
Query: 160 IAHCFSLVELENEFLDR----FLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
+A LV +E L S P+ TS CPGWVCYAEK+H ++LP++SRVKSPQ
Sbjct: 180 VAREACLVLGADEVLSAEDAPASSATKPILTSSCPGWVCYAEKTH-PYVLPHLSRVKSPQ 238
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE--------ELGYRDV 267
+MG+L+KT L++KLG+ PS I+H+ +MPC+DKKLEASR + + G RDV
Sbjct: 239 ALMGTLLKTTLSKKLGIPPSRIWHLAVMPCFDKKLEASREELTDSVWAGDGMPGRGVRDV 298
Query: 268 DCVITAVELEVLLAN------ELATTTLQEEK----DGILD-WPWDEHNPHRMLLVNGTG 316
DCVIT+ E+ +L + +LA + E+ D LD + + HR GT
Sbjct: 299 DCVITSKEVLMLAESRGFNFFDLARSKPSFERVFFPDARLDKFLFPGRIAHRSSQAAGT- 357
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE--ATFTCGDVTLRFCIANGFRNIQ 374
SGG + L + + PG ++ RN D+ E GD + GFRNIQ
Sbjct: 358 SGGNLYFTLQTVVSK-HPGSQ--IQVVRGRNADVVEFIVASPAGDPIFKAARYYGFRNIQ 414
Query: 375 NLIQKLKRKR----------------------LPYDFIEIMACPSGCLNGGAQIR 407
NL++KLK R L Y ++E+MACP GC NGG QI+
Sbjct: 415 NLVRKLKPARPSRMPGGKAFGAARRPAGKSAGLEYAYVEVMACPGGCTNGGGQIK 469
>gi|350638253|gb|EHA26609.1| hypothetical protein ASPNIDRAFT_170479 [Aspergillus niger ATCC
1015]
Length = 597
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 235/492 (47%), Gaps = 104/492 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAY--IQETNGREE 60
S +L DL+DFI P CIKP+ P + PS + D Y E + E
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPAKDPS----------KTDNPYEVTTEDKVQPE 50
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI---------RENNA---HKAS 108
L +ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + RE+ +
Sbjct: 51 NLPPAQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAHPELPLNREDGTITQELGT 110
Query: 109 SNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKR-----------LGVDLVLD 157
+++ + V S++ Q SL A + ++ ++ + F G V D
Sbjct: 111 ASDEGRVFVASVSPQVRASLAATYGITEKEATYMIHQFLSGPHGLRAGGKNGSGFTWVAD 170
Query: 158 VGIAHCFSLVELENEF-------LDRFLSGGG-------PLFTSECPGWVCYAEKSHGEF 203
+ LV +E D + G P+ +S CPGW+CYAEK+H F
Sbjct: 171 TNVLREAVLVLTADEVGETLTTSPDSSSTNGATNTLPKRPILSSACPGWICYAEKTH-SF 229
Query: 204 ILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEE-- 261
+LP++SR+KSPQ + G+ KT L++ LG+ S I+H+ +MPC+DKKLEASR + +
Sbjct: 230 VLPHLSRLKSPQALAGTFFKTVLSKSLGIPASRIWHLAVMPCFDKKLEASREELTDASWL 289
Query: 262 -------LGYRDVDCVITAVELEVLLANE-----------LATTTLQEEKDGIL-DWPWD 302
RDVDCVIT E+ L ++ L + + D L D+ +
Sbjct: 290 SAKDEGHTAVRDVDCVITTREMLSLASSRGISLPNLPFKSLPQSYIPPFPDMTLNDFLFS 349
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVT- 361
+ +P + GT SGGY H+VL + PG V + RN D+ E T + T
Sbjct: 350 KSSPGQSAAA-GT-SGGYLHHVL-QTFQARNPGSEIVTQRG--RNADVVEYTLMSSERTP 404
Query: 362 -LRFCIANGFRNIQNLIQKLK----------RKRLP-------------YDFIEIMACPS 397
L+ GFRNIQNL++KLK +RLP Y ++E+MACP
Sbjct: 405 ILKAARYYGFRNIQNLVRKLKPARASRLPGGNRRLPVGRGAASGSSGTDYAYVEVMACPG 464
Query: 398 GCLNGGAQIRNE 409
GC NGG QIR E
Sbjct: 465 GCTNGGGQIRIE 476
>gi|238486138|ref|XP_002374307.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Aspergillus flavus NRRL3357]
gi|259511265|sp|B8N122.1|NAR1_ASPFN RecName: Full=Cytosolic Fe-S cluster assembly factor nar1; AltName:
Full=Nuclear architecture-related protein 1
gi|220699186|gb|EED55525.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Aspergillus flavus NRRL3357]
Length = 562
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 255/550 (46%), Gaps = 113/550 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P + S + ++ +D +Q E L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPKNESSNSQNPYEVTTEDK---VQP-----ENL 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI----------RENNAHKASSNE- 111
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + N + SS+
Sbjct: 53 PPAQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAYPELPLTQNHNGPYTGSSDAL 112
Query: 112 --NTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKR-----------LGVDLVLDV 158
++ V S++ Q SL A + +S ++ + F G V+D
Sbjct: 113 DGESRIFVASVSPQVRASLAATYGISEKEATYMIDQFLSGPHGLRAGGKHGSGFSWVVDT 172
Query: 159 GIAHCFSLVELENEFLDRFLSGGG-----------PLFTSECPGWVCYAEKSHGEFILPY 207
+ LV +E + P+ +S CPGW+CYAEK+H F+LP+
Sbjct: 173 NVMRDAILVLTADEVSETLKEPSARAISKDTLPKRPVLSSACPGWICYAEKTH-PFVLPH 231
Query: 208 ISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELG---- 263
+SR+KSPQ + G+ +KT L++ LGV PS ++H+ +MPC+DKKLEASR + +
Sbjct: 232 LSRLKSPQALTGTFLKTVLSKALGVPPSRVWHLAIMPCFDKKLEASREELTDVSWSPLDG 291
Query: 264 ----------YRDVDCVITAVELEVLLANE-----------LATTTLQEEKDGILD-WPW 301
RDVDCVIT EL L ++ LA + D L+ + +
Sbjct: 292 GVPLTESNKPVRDVDCVITTRELLTLASSRGISLPTLPLKSLAPSYTPHFPDETLNAFLF 351
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GD 359
+ N + GT SGGY H+VL + PG V + RN D+ E + G+
Sbjct: 352 RKQNGSEQSMEAGT-SGGYLHHVL-KTFQAKNPGSEIVTQRG--RNADVVEYSLMSPGGE 407
Query: 360 VTLRFCIANGFRNIQNLIQKLKR---KRLP-----------------------------Y 387
++ GFRNIQNL++KLK RLP Y
Sbjct: 408 PLMKAARYYGFRNIQNLVRKLKPARVSRLPGARVPAASAGGNRRQPISRNSASAGSGTDY 467
Query: 388 DFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPREN-ATLEHLYKAW 446
++E+MACP GC NGG QIR E A T+ + T + + +K P E A L + +A+
Sbjct: 468 AYVEVMACPGGCTNGGGQIRIED-AREASTSTQSVTAVENPSKPTPHEQRAWLARVDEAY 526
Query: 447 LGGKSTDKGK 456
+S + K
Sbjct: 527 FSAESDAEAK 536
>gi|350296459|gb|EGZ77436.1| iron hydrogenase [Neurospora tetrasperma FGSC 2509]
Length = 581
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 231/479 (48%), Gaps = 87/479 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGA-----KIRIQDDGAYIQETNGREE 60
S +L + DL+DFI P CIKPI + P G ++ + DG Q+ +
Sbjct: 1 MSAILSVDDLNDFISPGVACIKPIETLPTAAPPAGDVNSSLEVEVILDG---QQPEAKSN 57
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHK-------------A 107
EISLTDCLACSGC+TSAE+VL++ QSH EV+ ++ A K
Sbjct: 58 A-PPAEISLTDCLACSGCVTSAEAVLVSLQSHNEVLNMLDSAPALKLVGPDTNGKYSVEG 116
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCG--FFKRLGV----------DL 154
N K V S++ Q SL A EQ ++ F G+
Sbjct: 117 LENSAAKLYVASVSPQSRASLAAACGNGVTEQQAGRMIEQLFLGEQGLARGGEWGNKFTW 176
Query: 155 VLDVGIAHCFSLVELENEFLDRFLS----GGGPLFTSECPGWVCYAEKSHGEFILPYISR 210
V+D A +LV +E L ++ P+ T+ CPGWVCYAEK+H ++LP++SR
Sbjct: 177 VVDTNTAREATLVLGSDEVLGGLIAPSDKAATPVLTASCPGWVCYAEKTH-PYVLPHLSR 235
Query: 211 VKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE--------EL 262
VKSPQ +MG+L+KT L+ L + P I+H+ +MPC+DKKLEASR + +
Sbjct: 236 VKSPQALMGTLLKTSLSRILDIAPERIWHLAVMPCFDKKLEASREELTDAIWARDGKPGR 295
Query: 263 GYRDVDCVITAVELEVLLANE----------LATTTLQEEKDGILDWPWDEHNPHRMLLV 312
G RDVDCVIT+ E+ +L A+ + T + I D+ + HR
Sbjct: 296 GVRDVDCVITSKEVLMLAASRGFDFFSLSASMPPQTPRFPDQLIHDFLF--RPGHRQQSR 353
Query: 313 NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVTLRFCIANGF 370
SGG H +L H ++ PG ++ P RN D+ E G+V + GF
Sbjct: 354 EAGTSGGNMHFILRH-LQAKNPGSQ--IQTVPGRNADVVEYKLIAEAGEVMFKAARYYGF 410
Query: 371 RNIQNLIQKLK---RKRLP-------------------YDFIEIMACPSGCLNGGAQIR 407
RNIQNL++KLK R+P Y ++E+MACP GC NGG QI+
Sbjct: 411 RNIQNLVRKLKPAKASRMPGGKPFGSAKRPAGKSSGLDYGYVEVMACPGGCTNGGGQIK 469
>gi|340521976|gb|EGR52209.1| predicted protein [Trichoderma reesei QM6a]
Length = 577
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 225/478 (47%), Gaps = 83/478 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYI---QETNGREEKL 62
S +L DL+DFI P CIKPI E A ++ I Q+
Sbjct: 1 MSAILSADDLNDFISPGVACIKPI--ETLPADAPPAPPSSANENEVILDGQQQPSTASAA 58
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE-------------NNAHKASS 109
+ISLTDCLACSGC+TSAE++L++ QSH EV+ + N A +
Sbjct: 59 SPAQISLTDCLACSGCVTSAEAILVSLQSHTEVLSTLDAAPALRVVGPDAAGNFAVEGLD 118
Query: 110 NENTKTIVLSLAIQPVLSLGAK--FALSHEQVVAKLCGFFK-----------RLGVDLVL 156
N++ K V S++ Q +L A +S Q L + + V+
Sbjct: 119 NDDAKLFVASVSAQTRANLAAACGRGVSESQAGYMLENLLRGPEGLAKAGKWNNAFEWVV 178
Query: 157 DVGIAHCFSLVELENEFLDRFLSG----GGPLFTSECPGWVCYAEKSHGEFILPYISRVK 212
D+ +A +L E L G P+ S CPGWVCYAEK+H ++LP++S+VK
Sbjct: 179 DINVARDATLALGAAEVLSSPTPGVAKPSQPILASSCPGWVCYAEKTH-PYVLPHLSKVK 237
Query: 213 SPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL--------GY 264
SPQ +MG+L+KT L++KLGV PS I+HV +MPC+DKKLEASR + +E G
Sbjct: 238 SPQALMGTLLKTTLSKKLGVPPSRIWHVAVMPCFDKKLEASREELTDEVWARSGLPGKGI 297
Query: 265 RDVDCVITAVELEVLLANELATTTLQEEKDGIL---DWPWDEHNPHRMLLVN-------- 313
RDVDCVIT+ E+ ++LA K P+ + H L N
Sbjct: 298 RDVDCVITSKEV-LMLAESRGLDFFNFSKSASSVPPSIPFPDEKMHGFLFPNKGSRNPPR 356
Query: 314 -GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFR 371
SGG H++L Q E VV RN D+ E T G+ + GFR
Sbjct: 357 VAGSSGGLLHHILQTKAAQTPGSEIQVVRG---RNVDVVEYFVTVNGEPVFKAARYYGFR 413
Query: 372 NIQNLIQKLK---RKRLP-------------------YDFIEIMACPSGCLNGGAQIR 407
NIQNL+++LK R+P Y F+E+MACP GC NGG QI+
Sbjct: 414 NIQNLVRRLKPARPSRMPGGKPFGSARRPAGKAPSHDYSFVEVMACPGGCTNGGGQIK 471
>gi|145229679|ref|XP_001389148.1| cytosolic Fe-S cluster assembly factor nar1 [Aspergillus niger CBS
513.88]
gi|259511266|sp|A2Q9A9.1|NAR1_ASPNC RecName: Full=Cytosolic Fe-S cluster assembly factor nar1; AltName:
Full=Nuclear architecture-related protein 1
gi|134055257|emb|CAK43843.1| unnamed protein product [Aspergillus niger]
Length = 597
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 235/490 (47%), Gaps = 100/490 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P + PS ++ +D + E L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPAKDPSKTDNPYEVTTED--------KVQPENL 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI---------RENNA---HKASSN 110
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + RE+ +++
Sbjct: 53 PPAQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAHPELPLNREDGTITQELGTAS 112
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKR-----------LGVDLVLDVG 159
+ + V S++ Q SL A + ++ ++ + F G V D
Sbjct: 113 DEGRVFVASVSPQVRASLAATYGITEKEATYMIHQFLSGPHGLRAGGKNGSGFTWVADTN 172
Query: 160 IAHCFSLVELENEFLDRFLSGGG--------------PLFTSECPGWVCYAEKSHGEFIL 205
+ LV +E + + P+ +S CPGW+CYAEK+H F+L
Sbjct: 173 VLREAVLVLTADEVGETLTTSPDSPSTNGATNTLPKRPILSSACPGWICYAEKTH-PFVL 231
Query: 206 PYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN------ 259
P++SR+KSPQ + G+ KT L++ LG+ S I+H+ +MPC+DKKLEASR + +
Sbjct: 232 PHLSRLKSPQALAGTFFKTVLSKSLGIPASRIWHLAVMPCFDKKLEASREELTDASWLSA 291
Query: 260 ---EELGYRDVDCVITAVELEVLLANE-----------LATTTLQEEKDGIL-DWPWDEH 304
+ RDVDCVIT E+ L ++ L + + D L D+ + +
Sbjct: 292 KDEDHTAVRDVDCVITTREMLSLASSRGISLPNLPLKSLPQSYIPPFPDMTLNDFLFSKS 351
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVT--L 362
+P + GT SGGY H+VL + PG V + RN D+ E T + T L
Sbjct: 352 SPGQSAAA-GT-SGGYLHHVL-QTFQARNPGSEIVTQRG--RNADVVEYTLMSSEHTPIL 406
Query: 363 RFCIANGFRNIQNLIQKLK----------RKRLP-------------YDFIEIMACPSGC 399
+ GFRNIQNL++KLK +RLP Y ++E+MACP GC
Sbjct: 407 KAARYYGFRNIQNLVRKLKPARASRLPGGNRRLPVGRGAASGSSGTDYAYVEVMACPGGC 466
Query: 400 LNGGAQIRNE 409
NGG QIR E
Sbjct: 467 TNGGGQIRIE 476
>gi|322698495|gb|EFY90265.1| hypothetical protein MAC_03780 [Metarhizium acridum CQMa 102]
Length = 600
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 244/497 (49%), Gaps = 100/497 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQET---NGREEKL 62
S +L + DL+DFI P CIKPI P+ P A + Q+ G ++ +G++ ++
Sbjct: 1 MSAILSVDDLNDFISPGVACIKPIET-LPAAP---APPQGQEQGRALETEVILDGQQPRV 56
Query: 63 -------KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE-------NNAHKAS 108
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + ++ +
Sbjct: 57 GGGGGDASAAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLSTLDSAPGLRIVDDGGRGG 116
Query: 109 -------SNENTKTIVLSLAIQPVLSLGAK--FALSHEQVVAKLCGFFK----------- 148
NE+ + V S++ Q +L A +S Q L +
Sbjct: 117 RPRVDGLENEDARLFVASVSPQTRANLAAACGRGVSEAQAGRMLERLLRSERWGLAGGGR 176
Query: 149 -RLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGE 202
R G V+D +A +LV +E L R GG P+ +S CPGWVCYAEK+H
Sbjct: 177 WRNGFTWVVDTNVAREVALVLGADEVLGRTTRPGGNAPARPILSSACPGWVCYAEKTH-P 235
Query: 203 FILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE-- 260
+LP++SRVKSPQ + G+++KT L+ KLG+ PS I+H+ +MPC+DKKLEASR + +E
Sbjct: 236 HVLPHLSRVKSPQALTGTILKTTLSRKLGIPPSRIWHLAVMPCFDKKLEASREELTDEVW 295
Query: 261 ------ELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDW------PWDEHNPH 307
G RDVDCVIT+ E+ +L + L + + DG P+ + H
Sbjct: 296 AGSGLPGRGVRDVDCVITSKEILMLAESRGLNFFDIPRDNDGTTSSLLEPAVPFPDARLH 355
Query: 308 RMLL----------VNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC 357
L + G+ SGG +++L Q+ PG ++ RN D+ E
Sbjct: 356 SFLFPARASPRVPRMAGS-SGGLLYHILQCKAAQI-PGAQ--IQTTRGRNADVVEFVVAA 411
Query: 358 -GDVTLRFCIANGFRNIQNLIQKLKRKR----------------------LPYDFIEIMA 394
G+ + GFRNIQNL+++LK R L Y ++E+MA
Sbjct: 412 NGEPVFKAARYYGFRNIQNLVRRLKPARPSRMPGGKPFGSARRPTGKSASLEYGYVEVMA 471
Query: 395 CPSGCLNGGAQIRNEKV 411
CP GC NGG Q++ + +
Sbjct: 472 CPGGCTNGGGQLKADDL 488
>gi|440631831|gb|ELR01750.1| hypothetical protein GMDG_00126 [Geomyces destructans 20631-21]
Length = 579
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 233/481 (48%), Gaps = 99/481 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGRE---EKL 62
S +L DL+DFI P CIKPI P DD Y + + L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPPPA---------ADDNPYELKFSNEAPLPSDL 51
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI---------RENNAHKASSNENT 113
EISLTDCLACSGC+TSAE+VL++ QSH EV+ + ++ N++
Sbjct: 52 PPAEISLTDCLACSGCVTSAEAVLVSLQSHAEVLNALDTAPALQLGQDGGIQSGVGNQDG 111
Query: 114 KTIVLSLAIQPVLSLGAKFALSH-------EQVVAKLCGFF----KRLGVDLVLDVGIAH 162
+ + S++ Q S+ A + +S EQ+++ G ++ G V+D +A
Sbjct: 112 RIYIASVSPQSRASISAAYGVSEREAGYMIEQLLSGPQGLRIGGEQKNGFQWVVDTNVAR 171
Query: 163 CFSLV----ELENEFLDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVM 218
LV E+ R P+ TS CPGW+CYAEK+H +LP++SR+KSPQ +M
Sbjct: 172 EACLVLGAEEVAASMQGRKEGPTKPILTSSCPGWICYAEKTH-PHVLPHLSRLKSPQALM 230
Query: 219 GSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF----YNEEL-----GYRDVDC 269
G+L+KT L++KL + P I+HV +MPC+DKKLEASR + ++ E G RDVDC
Sbjct: 231 GTLLKTTLSKKLKISPDMIWHVAVMPCFDKKLEASREELTDIHWDGEASPGTKGVRDVDC 290
Query: 270 VITAVELEVLLANELAT----------TTLQEEKDGILDWPWDEHN----PHRMLLVNGT 315
V+T+ EL ++LA +T Q D L HN P + NG
Sbjct: 291 VLTSKEL-IMLAESRGIDFAALPRSQLSTSQSFPDQAL------HNFLFPPRSSIQSNGD 343
Query: 316 ----GSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--TCGDVTLRFCIANG 369
SGG H +L + Q PG + ++ RN D+ + + G+ + G
Sbjct: 344 RAAGTSGGNLHYILQYFASQ-HPGST--IQTTRGRNADVMDYNIISSSGETLFKTARYYG 400
Query: 370 FRNIQNLIQKLK---RKRLP--------------------YDFIEIMACPSGCLNGGAQI 406
FRNIQNL++KLK R+P ++E+MACP GC NGG QI
Sbjct: 401 FRNIQNLVRKLKPVRPSRMPGGRPVGAARKPVGKAGSSVELSYVEVMACPGGCTNGGGQI 460
Query: 407 R 407
+
Sbjct: 461 K 461
>gi|46107184|ref|XP_380651.1| hypothetical protein FG00475.1 [Gibberella zeae PH-1]
Length = 577
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 228/475 (48%), Gaps = 82/475 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKPI PS P ++ + + +
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIET-LPSAPPPQSQSQSLETEVILDGQQPTANPNTPA 59
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN------------ENT 113
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + A + ++ EN
Sbjct: 60 QISLTDCLACSGCVTSAEAVLVSLQSHAEVLTTLDSAPALRLVTDDSGKFRVEGLEDENA 119
Query: 114 KTIVLSLAIQPVLSLGAK--FALSHEQVVAKLCGFFKRL-GVD----------LVLDVGI 160
K V+S++ Q +L A +S QV L F+ GV V+D
Sbjct: 120 KLFVVSVSPQTRANLAAACGAGVSEAQVGHMLDNLFRGPEGVASGGKYNNEFAWVVDTNT 179
Query: 161 AHCFSLVELENEFLDRFLSG----GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
A +LV +E L+ S P+ S CPGWVCYAEK+H +LP+IS+VKSPQ
Sbjct: 180 AREATLVLGADEVLNPSQSTPATPAKPILASSCPGWVCYAEKTH-PHVLPHISKVKSPQA 238
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL--------GYRDVD 268
+MG+L+KT L+ LG+ PS I+H+ +MPC+DKKLEASR + E G RDVD
Sbjct: 239 LMGTLLKTTLSRTLGIAPSRIWHLAIMPCFDKKLEASREELTEEVWAEGEIRGRGVRDVD 298
Query: 269 CVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH-----------RMLLVNGTGS 317
CVIT+ E+ ++LA K P + NP R L N
Sbjct: 299 CVITSKEI-LMLAESRGLNFFNVPKT-----PLSKSNPFPDPKLHDFLFPRRLPGNSPRE 352
Query: 318 GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC---GDVTLRFCIANGFRNIQ 374
G + +L H ++ ++P E R ++ A ++ G+ R GFRNIQ
Sbjct: 353 AGTSGGLLWHILKSRA-AQTPGAEIVHTRGRNVDVAEYSIVVNGEPVFRAARYYGFRNIQ 411
Query: 375 NLIQKL---KRKRLP-------------------YDFIEIMACPSGCLNGGAQIR 407
NL+++L K R+P Y ++E+MACP GC NGG QI+
Sbjct: 412 NLVRRLKPAKPSRMPGGKPFGSARKPAGKAGSLEYSYVEVMACPGGCTNGGGQIK 466
>gi|169771319|ref|XP_001820129.1| cytosolic Fe-S cluster assembly factor nar1 [Aspergillus oryzae
RIB40]
gi|121803716|sp|Q2UJY8.1|NAR1_ASPOR RecName: Full=Cytosolic Fe-S cluster assembly factor nar1; AltName:
Full=Nuclear architecture-related protein 1
gi|83767988|dbj|BAE58127.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871618|gb|EIT80775.1| nuclear architecture related protein [Aspergillus oryzae 3.042]
Length = 607
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 255/550 (46%), Gaps = 113/550 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P + S + ++ +D + E L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPKNESSNSQNPYEVTTED--------KVQPENL 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI----------RENNAHKASSNE- 111
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + N + SS+
Sbjct: 53 PPAQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAYPELPLTQNHNGPYTGSSDAL 112
Query: 112 --NTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKR-----------LGVDLVLDV 158
++ V S++ Q SL A + +S ++ + F G V+D
Sbjct: 113 DGESRIFVASVSPQVRASLAATYGISEKEATYMIDQFLSGPHGLRAGGKHGSGFSWVVDT 172
Query: 159 GIAHCFSLVELENEFLDRFLSGGG-----------PLFTSECPGWVCYAEKSHGEFILPY 207
+ LV +E + P+ +S CPGW+CYAEK+H F+LP+
Sbjct: 173 NVMRDAILVLTADEVSETLKEPSARAISKDTLPKRPVLSSACPGWICYAEKTH-PFVLPH 231
Query: 208 ISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELG---- 263
+SR+KSPQ + G+ +KT L++ LGV PS ++H+ +MPC+DKKLEASR + +
Sbjct: 232 LSRLKSPQALTGTFLKTVLSKALGVPPSRVWHLAIMPCFDKKLEASREELTDVSWSPLDG 291
Query: 264 ----------YRDVDCVITAVELEVLLANE-----------LATTTLQEEKDGILD-WPW 301
RDVDCVIT EL L ++ LA + D L+ + +
Sbjct: 292 GVPLTESNKPVRDVDCVITTRELLTLASSRGISLPTLPLKSLAPSYTPHFPDETLNAFLF 351
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GD 359
+ N + GT SGGY H+VL + PG V + RN D+ E + G+
Sbjct: 352 RKQNGSEQSMEAGT-SGGYLHHVL-KTFQAKNPGSEIVTQRG--RNADVVEYSLMSPGGE 407
Query: 360 VTLRFCIANGFRNIQNLIQKLKR---KRLP-----------------------------Y 387
++ GFRNIQNL++KLK RLP +
Sbjct: 408 PLMKAARYYGFRNIQNLVRKLKPARVSRLPGARVPAASAGGNRRQPISRNSASAGSGTDF 467
Query: 388 DFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPREN-ATLEHLYKAW 446
++E+MACP GC NGG QIR E A T+ + T + + +K P E A L + +A+
Sbjct: 468 AYVEVMACPGGCTNGGGQIRIED-AREASTSTQSVTAVENPSKPTPHEQRAWLARVDEAY 526
Query: 447 LGGKSTDKGK 456
+S +G+
Sbjct: 527 FSAESDAEGE 536
>gi|453089698|gb|EMF17738.1| iron hydrogenase [Mycosphaerella populorum SO2202]
Length = 615
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 253/544 (46%), Gaps = 108/544 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P ++P DD EEK+
Sbjct: 1 MSAILSADDLNDFINPGVACIKPVETLPKQQPPA----------DDANANPYEVTTEEKV 50
Query: 63 KK------VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNE----- 111
+ISLTDCLACSGC+TSAE++L++ QSH EV+ + + + K +E
Sbjct: 51 NSGTIAPPAQISLTDCLACSGCVTSAEAILVSLQSHAEVLDTLDKYHEMKVPGDESSAPC 110
Query: 112 -------------NTKTIVLSLAIQPVLSLGAKFALSHEQ---VVAKL--------CGFF 147
N K V S++ Q SL A + +S +V++L
Sbjct: 111 THTKNVESDTCCGNGKIFVASISPQARASLAATYNVSERDAGYMVSQLLSGPHGVKSAGK 170
Query: 148 KRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG-GGPLFTSECPGWVCYAEKSHGEFILP 206
G V+D SLV +E +D+ G P+ TS CPGW+CYAEK+H ILP
Sbjct: 171 HNSGFAWVVDTNAMREASLVAAADE-VDQLQDGQKKPIITSACPGWICYAEKTH-SHILP 228
Query: 207 YISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF----YNEEL 262
++SR+KSPQ + G LIK+ LA+K G+ P +++H+ +MPC+DKKLEASR++ ++ E
Sbjct: 229 HLSRLKSPQALTGVLIKSVLAKKYGIDPKNVWHLAIMPCFDKKLEASRSELTSHTWHGET 288
Query: 263 G--YRDVDCVITAVELEVLLANELATTTLQEEKDGILDW-PWDEHNPHRMLLVNGTG--- 316
G RDVDCVITA EL ++LA + K + D P+ E + L G
Sbjct: 289 GDAVRDVDCVITAREL-LMLAESRDISFPGLPKHPVTDLAPFPEPRVNEFLFGRSRGQKR 347
Query: 317 ----------SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRFCI 366
SGGY +VL + PG ++ + RN D+ E + D F
Sbjct: 348 KREDATSIGTSGGYLWHVLK-TQQTHHPGSH--IKVQRGRNQDVSEYSVVNADGLAVFKA 404
Query: 367 AN--GFRNIQNLIQKLK---RKRLP---------------------------YDFIEIMA 394
A GFRNIQNL++KLK R+P Y ++E+MA
Sbjct: 405 ARYYGFRNIQNLVRKLKPAKASRMPGASSTGRRVGGTRRPGGATKAGDDSQDYAYVEVMA 464
Query: 395 CPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKA-WLGGKSTD 453
CP GC NGG QI+ VA+ ++ + P + L + +A W GG S
Sbjct: 465 CPGGCTNGGGQIKVGDVATLRQVGGGTGIENGGSQEMIPAQREWLAKVDEAYWSGGTSVS 524
Query: 454 KGKH 457
H
Sbjct: 525 DSDH 528
>gi|398410453|ref|XP_003856577.1| hypothetical protein MYCGRDRAFT_66934 [Zymoseptoria tritici IPO323]
gi|339476462|gb|EGP91553.1| hypothetical protein MYCGRDRAFT_66934 [Zymoseptoria tritici IPO323]
Length = 617
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 240/509 (47%), Gaps = 116/509 (22%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P ++P +D GAY T EEK+
Sbjct: 1 MSAILSADDLNDFINPGVACIKPVETLPKQQPP----------EDSGAYEVTT---EEKV 47
Query: 63 KK------VEISLTDCLACSGCITSAESVLITQQSHEEVMKVI----------RENNA-- 104
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + +E+
Sbjct: 48 NANTVAPPAQISLTDCLACSGCVTSAEAVLVSLQSHGEVLDTLDRYKELSIPAQEDGTVT 107
Query: 105 -HKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQ----VVAKLCGFF-------KRLGV 152
S E K V S++ Q SL A + ++ + + LCG G
Sbjct: 108 LEGTSQQEEGKIFVASVSPQARASLAATYNVTEREAGHMISQLLCGPLGVKSGGQNGSGF 167
Query: 153 DLVLDVGIAHCFSLVELENEFLDRFLS----GGGPLFTSECPGWVCYAEKSHGEFILPYI 208
VLD SLV +E + ++ P+ TS CPGW+CYAEK+H ILP++
Sbjct: 168 AWVLDTNAMREASLVAAADEVEESLVTLAEGQKKPVITSACPGWICYAEKTH-PHILPHL 226
Query: 209 SRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL------ 262
S++KSPQ + G ++K+ LA+K G+ P +++H+ +MPC+DKKLEASR + +
Sbjct: 227 SKLKSPQALTGVMVKSVLAKKFGIAPQNVWHLAVMPCFDKKLEASRGELTSHSWHGQDGD 286
Query: 263 GYRDVDCVITAVELEVLLANE------LATTTLQEE----------KDGILDWPWDEHNP 306
RDVDCVITA EL +L + L + + E D + P +
Sbjct: 287 SVRDVDCVITARELLMLAESRDISFPALPKSPVAREFTPAFPDIVMNDYLFRSPRGQKRK 346
Query: 307 HRMLLVNGTG-SGGYAHNVL-SHAIRQLCPGESPVVEFKPLRNPDIREATF---TCGDVT 361
+ G SGGY H++L + R PG ++ RN D+ E T T G+
Sbjct: 347 REEGITASIGTSGGYLHHILKTQQARH--PGSE--IQAHRGRNSDVAEYTLVDPTSGETV 402
Query: 362 LRFCIANGFRNIQNLIQKL---KRKRLP-------------------------------Y 387
R GFRNIQNL+++L K R+P Y
Sbjct: 403 FRAARYYGFRNIQNLVRRLKPPKASRMPGASRKPGVVRRSAAGTTGSPASAAASGNGADY 462
Query: 388 DFIEIMACPSGCLNGGAQIRNEKVASPKE 416
++E+MACP GC NGG QI+ VA+ ++
Sbjct: 463 AYVEVMACPGGCTNGGGQIKVGDVATLRQ 491
>gi|344250196|gb|EGW06300.1| Nuclear prelamin A recognition factor [Cricetulus griseus]
Length = 331
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 185/339 (54%), Gaps = 24/339 (7%)
Query: 152 VDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILP 206
V V D IA FS++E + EF+ R+ P+ TS CPGWV YAE+ G ++P
Sbjct: 4 VHYVFDTTIAADFSILESQKEFVRRYHRHSEEQRELPMLTSACPGWVRYAERVLGRPVIP 63
Query: 207 YISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRD 266
++ KSPQQ+MGSL+K + A + + P I+HV + PCYDKKLEA R G R
Sbjct: 64 HLCTAKSPQQIMGSLVKDYFARQQNLSPEKIFHVVVAPCYDKKLEALREGLSTTLNGARG 123
Query: 267 VDCVITAVEL-EVLLANELAT------TTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGG 319
DCV+T+ E+ +++ ++L+ T + K+ + W D G S G
Sbjct: 124 TDCVLTSGEIAQIMEQSDLSVKDTAVDTLFGDVKEEVAVWRHD-----------GVSSDG 172
Query: 320 YAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTLRFCIANGFRNIQNLIQ 378
+ +V HA ++L + ++ LRN D E T G+V LRF A GFRNIQN+I
Sbjct: 173 HLAHVFRHAAKELFGEHIEEINYRALRNKDFHEVTLEKNGEVLLRFAAAYGFRNIQNMIL 232
Query: 379 KLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENAT 438
KLK+ + PY F+E++ACP GCLNG Q + E + + ++E I + P +A
Sbjct: 233 KLKKGKFPYHFVEVLACPRGCLNGRGQAQTEDGHTDRALLQQMEGIYSGIPVRPPESSAH 292
Query: 439 LEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
+E LY+ WL G + K + +L+T+Y ++ +L++KW
Sbjct: 293 VEELYQQWLEGTESPKVQEVLHTTYQSLEPCTDSLDMKW 331
>gi|358367009|dbj|GAA83629.1| iron-sulfur cluster assembly associated protein Nar1 [Aspergillus
kawachii IFO 4308]
Length = 597
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 231/490 (47%), Gaps = 100/490 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P + PS ++ +D + E L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPAKDPSKTDYPYEVTTED--------KVQPENL 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI---------RENNAHK---ASSN 110
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + REN + N
Sbjct: 53 PPAQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAHPELLINRENGTLAQGLGTDN 112
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKR-----------LGVDLVLDVG 159
+ + V S++ Q SL A + ++ ++ + F G V+D
Sbjct: 113 DEGRVFVASVSPQVRASLAATYGITEKEASYMIQQFLSGPHGLRAGGKNGSGFTWVVDTN 172
Query: 160 IAHCFSLVELENEFLDRFLSGGG--------------PLFTSECPGWVCYAEKSHGEFIL 205
+ LV +E + + P+ +S CPGW+CYAEK+H F+L
Sbjct: 173 VLREAVLVLTADEVGETLTTNPDSPSTTSATNTLPKRPILSSACPGWICYAEKTH-PFVL 231
Query: 206 PYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN------ 259
P++SR+KSPQ + G+ KT L++ LG+ S I+H+ +MPC+DKKLEASR + +
Sbjct: 232 PHLSRLKSPQALAGTFFKTVLSKSLGIPASRIWHLAVMPCFDKKLEASREELTDASWLSA 291
Query: 260 ---EELGYRDVDCVITAVELEVLLANE---LATTTLQEEKDGILDWPWDEHNPHRMLL-- 311
+ RDVDCVIT EL L ++ L + + P+ + + L
Sbjct: 292 KDEDHTPVRDVDCVITTRELLSLASSRGLALPNLPFKSLPQAYIP-PFPDTTLNEFLFSK 350
Query: 312 -------VNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVT--L 362
GT SGGY H+VL + PG V + RN D+ E T + T L
Sbjct: 351 CSPGQSTAAGT-SGGYLHHVL-QTFQARNPGSEIVTQRG--RNADVVEYTLMSSEHTPIL 406
Query: 363 RFCIANGFRNIQNLIQKLK----------RKRLP-------------YDFIEIMACPSGC 399
+ GFRNIQNL++KLK +R+P Y ++E+MACP GC
Sbjct: 407 KAARYYGFRNIQNLVRKLKPARASRLPGGNRRMPVGRGAASGGSGTDYAYVEVMACPGGC 466
Query: 400 LNGGAQIRNE 409
NGG QIR E
Sbjct: 467 TNGGGQIRIE 476
>gi|242768778|ref|XP_002341638.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Talaromyces stipitatus ATCC 10500]
gi|218724834|gb|EED24251.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Talaromyces stipitatus ATCC 10500]
Length = 593
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 253/528 (47%), Gaps = 108/528 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P + + ++ +D + E
Sbjct: 1 MSAILSADDLNDFISPGLACIKPVESLPQKSTASAENAYEVTTED--------KVQPENQ 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHK------------ASSN 110
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + +AH+ ++S
Sbjct: 53 APTQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTL---DAHRPAPLIVAQDGDISASR 109
Query: 111 E---NTKTIVLSLAIQPVLSLGAKFALSHEQ---VVAKLCGFFKRL--------GVDLVL 156
E N + V S++ Q SL A + +S + ++ +L + L G V+
Sbjct: 110 EIEPNERIFVASVSPQVRASLAATYGISERKAGYMIDQLLRGPQGLRSGGKHGNGFTWVI 169
Query: 157 DVGIAHCFSLVELENEFLD------------RFLSGGGPLFTSECPGWVCYAEKSHGEFI 204
D + L E + R+ S P+ +S CPGW+CYAEK+H +
Sbjct: 170 DTDVLRQMVLTLAAQEVTESLSAPSTCKESGRYSSPKRPILSSACPGWICYAEKTH-PHV 228
Query: 205 LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF----YNE 260
LP++SR+KSPQ + G+ +K+ L+ LG+ PS I+H+ +MPC+DKKLEASR + +N+
Sbjct: 229 LPHLSRLKSPQALAGTFVKSILSRALGIAPSQIWHLAVMPCFDKKLEASREELTEAAWNK 288
Query: 261 -----ELGYRDVDCVITAVELEVLLANE-----------LATTTLQEEKDGILD-WPWDE 303
+ RDVDCVIT+ EL +L ++ LA D +D + +
Sbjct: 289 SSNTSQSPVRDVDCVITSRELLMLASSRNISLPSLPLKPLALAYAPHFPDSTIDSFLFSG 348
Query: 304 HNPHRMLLVNGTGSGGYAHNVL-SHAIRQLCPGESPVVEFKPLRNPDIREATFT--CGDV 360
+ + L GT SGGY + +L SH R PG +E + RN D+ E + +
Sbjct: 349 THTSKQSLAYGT-SGGYLYYILSSHQERH--PGSR--IEAQRGRNSDVVEYSLVSESNET 403
Query: 361 TLRFCIANGFRNIQNLIQKLKRKR---------------------LPYDFIEIMACPSGC 399
++ GFRNIQNL++K+K R L Y F+E+MACP GC
Sbjct: 404 IMKAARYYGFRNIQNLVRKMKPARASRLPGAKRGTTGSGVNGSSGLDYAFVEVMACPGGC 463
Query: 400 LNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWL 447
NGG QIR E +E + D + ++N T E + WL
Sbjct: 464 TNGGGQIRLEDA---REANSNMHNASIDDSTIMTQKNTTYEQ--REWL 506
>gi|242768782|ref|XP_002341639.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Talaromyces stipitatus ATCC 10500]
gi|218724835|gb|EED24252.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Talaromyces stipitatus ATCC 10500]
Length = 577
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 253/528 (47%), Gaps = 108/528 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P + + ++ +D + E
Sbjct: 1 MSAILSADDLNDFISPGLACIKPVESLPQKSTASAENAYEVTTED--------KVQPENQ 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHK------------ASSN 110
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + +AH+ ++S
Sbjct: 53 APTQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTL---DAHRPAPLIVAQDGDISASR 109
Query: 111 E---NTKTIVLSLAIQPVLSLGAKFALSHEQ---VVAKLCGFFKRL--------GVDLVL 156
E N + V S++ Q SL A + +S + ++ +L + L G V+
Sbjct: 110 EIEPNERIFVASVSPQVRASLAATYGISERKAGYMIDQLLRGPQGLRSGGKHGNGFTWVI 169
Query: 157 DVGIAHCFSLVELENEFLD------------RFLSGGGPLFTSECPGWVCYAEKSHGEFI 204
D + L E + R+ S P+ +S CPGW+CYAEK+H +
Sbjct: 170 DTDVLRQMVLTLAAQEVTESLSAPSTCKESGRYSSPKRPILSSACPGWICYAEKTH-PHV 228
Query: 205 LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF----YNE 260
LP++SR+KSPQ + G+ +K+ L+ LG+ PS I+H+ +MPC+DKKLEASR + +N+
Sbjct: 229 LPHLSRLKSPQALAGTFVKSILSRALGIAPSQIWHLAVMPCFDKKLEASREELTEAAWNK 288
Query: 261 -----ELGYRDVDCVITAVELEVLLANE-----------LATTTLQEEKDGILD-WPWDE 303
+ RDVDCVIT+ EL +L ++ LA D +D + +
Sbjct: 289 SSNTSQSPVRDVDCVITSRELLMLASSRNISLPSLPLKPLALAYAPHFPDSTIDSFLFSG 348
Query: 304 HNPHRMLLVNGTGSGGYAHNVL-SHAIRQLCPGESPVVEFKPLRNPDIREATFT--CGDV 360
+ + L GT SGGY + +L SH R PG +E + RN D+ E + +
Sbjct: 349 THTSKQSLAYGT-SGGYLYYILSSHQERH--PGSR--IEAQRGRNSDVVEYSLVSESNET 403
Query: 361 TLRFCIANGFRNIQNLIQKLKRKR---------------------LPYDFIEIMACPSGC 399
++ GFRNIQNL++K+K R L Y F+E+MACP GC
Sbjct: 404 IMKAARYYGFRNIQNLVRKMKPARASRLPGAKRGTTGSGVNGSSGLDYAFVEVMACPGGC 463
Query: 400 LNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWL 447
NGG QIR E +E + D + ++N T E + WL
Sbjct: 464 TNGGGQIRLEDA---REANSNMHNASIDDSTIMTQKNTTYEQ--REWL 506
>gi|403374972|gb|EJY87454.1| hypothetical protein OXYTRI_02709 [Oxytricha trifallax]
Length = 516
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 235/488 (48%), Gaps = 101/488 (20%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++SL+DCLACSGC+TSAE+VLI + S E+ +K+ + N ++++++ Q +
Sbjct: 54 KVSLSDCLACSGCVTSAETVLIQKHSTEQFLKLFDQQNF-----------VIVAISPQSL 102
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---- 180
SL + + E V KL F +LG +V+D+ +L +EF ++F
Sbjct: 103 GSLSLFYQQNSEVVTFKKLQTVFTKLGAQMVIDLSTFSLLTLQLAYDEFKNKFTQSEKFK 162
Query: 181 -------------------------GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
G P+ SECPGWVCYAEK G+ P++S VKSPQ
Sbjct: 163 KINNQKGEEEVKSSKKVFTKQSQEPGIPILASECPGWVCYAEKVVGDQAFPFMSTVKSPQ 222
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFY--------NEELGYRDV 267
Q+ G L+K +++ K + P H+ VT+MPCYDKKLEA R +F N +L ++V
Sbjct: 223 QLCGCLLKHYVSLKNKLSPEHVKIVTVMPCYDKKLEAVRPNFTLSEDVGQDNPDLEIKEV 282
Query: 268 DCVITAVELEVLLANELATTTL----QEEKDGIL-------DWPW------------DEH 304
D V+ EL L+ E + L Q +KD L W + D
Sbjct: 283 DTVLATHELTDLIGVERDSFNLIQEYQWQKDEDLAMKGSPSGWGFMELMEQFVEVSQDVQ 342
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE-SPVVEFKPL--RNPDIREATFTC-GDV 360
H + + N T S GY V A +++ + SP E + +N D++E G V
Sbjct: 343 RLHMISMYNMT-SNGYLEYVFRRAAKEIFNQQISPQTELNYIQGKNKDLKECVLEIDGKV 401
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA-SPKETAL 419
+RF A GFRNIQN+I+ +KR + YD++EIMACP GCLNGG QI+ + + SPK+
Sbjct: 402 VMRFAAAYGFRNIQNVIRNIKRGKCEYDYVEIMACPGGCLNGGGQIKPAQFSTSPKDLLD 461
Query: 420 ELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI---- 471
LE + ++ EP N + L M++ +Y + K
Sbjct: 462 NLEIQMKNMNNKEIVPEPESNKVIHQLI-------------QMMSITYQDWDKTTFKAVQ 508
Query: 472 --ALNVKW 477
+N+KW
Sbjct: 509 KEVINMKW 516
>gi|380495190|emb|CCF32587.1| cytosolic Fe-S cluster assembly factor NAR1 [Colletotrichum
higginsianum]
Length = 589
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 231/482 (47%), Gaps = 88/482 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQD----DGAYIQETNGREEK 61
S +L DL+DFI P CIKPI + P + ++ DG Q +
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPSAAPSSQDASSLEHEVILDG---QPGSAAAAN 57
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHK-------------AS 108
EISLTDCLACSGC+TSAE+VL++ QSH EV+ + A +
Sbjct: 58 APPAEISLTDCLACSGCVTSAEAVLVSMQSHTEVLNTLDFGPALRIVGPDCSGQFRVDGL 117
Query: 109 SNENTKTIVLSLAIQPVLSLGAKFALSH---------EQVVAKLCGFFK----RLGVDLV 155
+E+ K V S++ Q SL A E++++ G R G V
Sbjct: 118 EDESRKLFVASVSPQTRASLAAAAGGGTTEEEAGHMLERLLSGPEGLASAGKHRNGFTWV 177
Query: 156 LDVGIAHCFSLVELENEFLD-------RFLSGGGPLFTSECPGWVCYAEKSHGEFILPYI 208
LD +A LV +E L + P+ TS CPGWVCYAEK+H ++LP++
Sbjct: 178 LDTNVAREACLVLGADEVLGAERAPASTAAAATKPILTSSCPGWVCYAEKTH-PYVLPHL 236
Query: 209 SRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL------ 262
SRVKSPQ +MG+L+KT L++KLG+ PS I+H+ +MPC+DKKLEASR + +
Sbjct: 237 SRVKSPQALMGTLLKTTLSKKLGIPPSRIWHLAVMPCFDKKLEASREELTDSVWAGDGLP 296
Query: 263 --GYRDVDCVITAVELEVLLAN------ELATTTLQEEKDGILD-----WPWDEHNPHRM 309
G RDVDCVIT+ E+ +L + ++ + L ++ D + + H HR
Sbjct: 297 GRGVRDVDCVITSKEVLMLAESRGLNFFDVPRSKLNHQRPLFPDARLASFLFPGHGAHRS 356
Query: 310 LLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE--ATFTCGDVTLRFCIA 367
GT SGG + L + + VV RN D+ E + GD +
Sbjct: 357 SRAAGT-SGGNLYFTLQSVASKHPDSQIQVVRG---RNADVVEFIVASSTGDPIFKAARY 412
Query: 368 NGFRNIQNLIQKLKRKR----------------------LPYDFIEIMACPSGCLNGGAQ 405
GFRNIQNL++KLK R L Y ++E+MACP GC NGG Q
Sbjct: 413 YGFRNIQNLVRKLKPARPSRMPGGKAFGAARRPTGKSAGLEYAYVEVMACPGGCTNGGGQ 472
Query: 406 IR 407
I+
Sbjct: 473 IK 474
>gi|296807987|ref|XP_002844332.1| nuclear prelamin A recognition factor-like protein [Arthroderma
otae CBS 113480]
gi|238843815|gb|EEQ33477.1| nuclear prelamin A recognition factor-like protein [Arthroderma
otae CBS 113480]
Length = 610
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 259/544 (47%), Gaps = 108/544 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ T K + ++ E EE
Sbjct: 1 MSAILSADDLNDFISPGVACIKPV--------ETLPKKKEENLYEVTTEDKLEEENPPPA 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT---KTIVLSLAI 122
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + + + S + K V S++
Sbjct: 53 QISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDASPEIRIGSADGAGCGKIFVASVSP 112
Query: 123 QPVLSLGAKFALSH-------EQVVAKLCGFFKR----LGVDLVLDVGIAHCFSLVELEN 171
Q SL A + +S EQ+++ G G V+D I +++EL
Sbjct: 113 QVRASLAATYGISEKKAGYMIEQLLSGPSGLRAGGQHGSGFTWVVDTNIMR-QAVLELST 171
Query: 172 EFLD----------------RFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
+ +F P+ TS CPGW+CYAEK+H +LP++SR+KSPQ
Sbjct: 172 AEVTESLAAASSTSSRDGHGKFPIPNRPILTSSCPGWICYAEKTH-PHVLPHLSRLKSPQ 230
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN----------EELG-- 263
+ G+ +KT ++ KL + PS I+H+ +MPC+DKKLEASR + + EE G
Sbjct: 231 ALTGTFLKTIISRKLNISPSQIWHLAIMPCFDKKLEASRQELTDVSWRNESNTMEESGSP 290
Query: 264 YRDVDCVITAVELEVLLANE---LATTTLQEEKDGILDWPWDEHNPHRMLLVN------- 313
RDVDCVIT+ EL +L ++ L++ L E P+ + R L N
Sbjct: 291 IRDVDCVITSKELLMLASSRNITLSSLPL-EPLPAHYSTPFPDQTVSRFLSANAFRSTQS 349
Query: 314 --GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--TCGDVTLRFCIANG 369
S GY H++L+ + P +++ + RN D+ E T GD ++ G
Sbjct: 350 SAAGPSDGYLHHLLT-TYQSRHPNS--IIQAQRGRNADVVEYTLVSATGDPIIKAARYYG 406
Query: 370 FRNIQNLIQKLK---RKRLP--------------------------------YDFIEIMA 394
FRNIQNL++KLK RLP + ++E+MA
Sbjct: 407 FRNIQNLVRKLKPARTSRLPGSRVIQPNPNGARTRPSPLANGKAATPAPPSEFAYVEVMA 466
Query: 395 CPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPREN-ATLEHLYKAWLGGKSTD 453
CP GC NGG QIR E A +AL E + + KS P++ A L + +A+ S D
Sbjct: 467 CPGGCTNGGGQIRLED-ARQANSALS-ENVAQNGQKSTPQDQRAWLARVDEAYYSDSSDD 524
Query: 454 KGKH 457
+G++
Sbjct: 525 EGQN 528
>gi|225682723|gb|EEH21007.1| iron-sulfur cluster assembly associated protein Nar1
[Paracoccidioides brasiliensis Pb03]
Length = 629
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 257/546 (47%), Gaps = 116/546 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P E ++ +D IQ N
Sbjct: 1 MSAILSSDDLNDFISPGVACIKPVETLPEEDSKNQENAYEVTTEDK---IQAGNP----- 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE------NNAHKASSN------ 110
+ISLTDCLACSGC+TSAE+VL++ QSH EV+K + +N K S
Sbjct: 53 PAAQISLTDCLACSGCVTSAEAVLVSLQSHSEVLKTLDSCPELQIHNQKKCGSQSSRPDV 112
Query: 111 -----------ENTKTIVLSLAIQPVLSLGAKFALSH-------EQVV----------AK 142
+ K + S++ Q SL A F +S EQ + A
Sbjct: 113 PCSAEGQTCSADGRKIFIASVSPQVRASLAATFGISERKAGYLIEQFLSGPQGLRAGGAH 172
Query: 143 LCGFFKRLGVDLV----LDVGIAHCFSLVELENEFL--DRFLSGGGPLFTSECPGWVCYA 196
GF + +++ L++G+ +E+ + + F P+ +S CPGW+CYA
Sbjct: 173 GSGFTWVVDTNVMRNVCLELGVTEVKESLEISGNTISGEEFPVPKRPILSSICPGWICYA 232
Query: 197 EKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD 256
EK+H +LP++SR+KSPQ + G+L+K+ L + L + P HI+H+ +MPC+DKKLEASR +
Sbjct: 233 EKTH-PHVLPHMSRIKSPQALTGTLLKSVLRKALNISPCHIWHLAIMPCFDKKLEASRQE 291
Query: 257 FYN---EELGY-------RDVDCVITAVELEVLLANE-----------LATTTLQEEKDG 295
N + L + RDVDCVIT+ EL +L + L +++ D
Sbjct: 292 LTNASWQGLSWTESHTPVRDVDCVITSRELLMLATSRNISLLNLPMKPLPPSSITPFPDT 351
Query: 296 ILD-WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREAT 354
L+ + + + PH G SGGY +++L+ R+ PG ++ + RN D+ E
Sbjct: 352 YLERFLFPKSLPHAQCPAAGP-SGGYLYHILTTYQRR-NPGSH--IQTQRGRNSDVIEYA 407
Query: 355 FT--CGDVTLRFCIANGFRNIQNLIQKLK---RKRLP----------------------- 386
T GD ++ GFRNIQNL++KLK RLP
Sbjct: 408 LTSNSGDTIIKAARYYGFRNIQNLVRKLKPPRTSRLPGAKPIIARKAAGAGSAAGNASVT 467
Query: 387 -YDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETIL---CDLAKSEPRENATLEHL 442
Y +IE+MACP GC NGG QIR E LE + + D A+ + + H
Sbjct: 468 DYSYIEVMACPGGCTNGGGQIRVEDAREINPPKLEEQPSIQASVDPAQLQQSTSKPTPHE 527
Query: 443 YKAWLG 448
+AWL
Sbjct: 528 QRAWLA 533
>gi|156062172|ref|XP_001597008.1| hypothetical protein SS1G_01201 [Sclerotinia sclerotiorum 1980]
gi|259511273|sp|A7E7C4.1|NAR1_SCLS1 RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|154696538|gb|EDN96276.1| hypothetical protein SS1G_01201 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 571
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 248/520 (47%), Gaps = 98/520 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P KPS +I D + L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPAAKPSADNE-LEISFNTDAPLPSD-------L 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN------------ 110
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + + N
Sbjct: 53 PPAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLSQLDSAPGLRLYKNATGTGIKVEGVE 112
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSH-------EQVVAKLCGFFKRL----GVDLVLDVG 159
+ K V S++ Q S+ A F ++ E +++ G R V+D
Sbjct: 113 QGGKIYVASVSPQSRASIAATFGVTEREAGYMIEHLLSGPKGIKNRAVYRNAFQWVVDTN 172
Query: 160 IAHCFSLVELENEFLDRFLSGGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQV 217
I LV E + G P+ TS CPGWVCYAEK+H +LP++SR+KSPQ +
Sbjct: 173 ITREACLVLGAEEVIASMTDTGSKKPVLTSSCPGWVCYAEKTH-PHVLPHLSRMKSPQAL 231
Query: 218 MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE------ELGYRDVDCVI 271
MG+LIKT L+ KLG+ P I+HV +MPC+DKKLEASR + + G RDVD VI
Sbjct: 232 MGTLIKTTLSRKLGISPDRIWHVAVMPCFDKKLEASREELTDAVWEGTGTRGVRDVDSVI 291
Query: 272 TAVELEVLLANE------------LATTTLQEEKDGILD---WPWDEHNPHRMLLVNGTG 316
T+ EL ++LA+ + T++ D +D +P + GT
Sbjct: 292 TSKEL-LMLADSRGIEFSKLPRTPIPTSSRIPFPDTKIDSFLFPSNRKGSGNGNRDAGT- 349
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVTLRFCIANGFRNIQ 374
SGG H L H G S ++ RN D+ + T G++ L+ GFRNIQ
Sbjct: 350 SGGNLHYAL-HYFASQHKGSS--IQTIKGRNVDVVDYTVVAENGEILLKAARYYGFRNIQ 406
Query: 375 NLIQKLKR---KRLP-------------------YDFIEIMACPSGCLNGGAQIRNEKVA 412
NL+++LK R+P Y ++E+MACP GC NGG QI KV
Sbjct: 407 NLVRRLKPAKPSRMPGGKPIGSARRPNGKASGPDYSYVEVMACPGGCTNGGGQI---KVD 463
Query: 413 SPKETA-LELETILCDLAKSEPRENAT-LEHLYKAWLGGK 450
P T+ LE + AK+ P+E L + +A+ G+
Sbjct: 464 DPINTSRLEGD------AKAGPQEQKMWLAQVDEAYFSGE 497
>gi|67526349|ref|XP_661236.1| hypothetical protein AN3632.2 [Aspergillus nidulans FGSC A4]
gi|40740650|gb|EAA59840.1| hypothetical protein AN3632.2 [Aspergillus nidulans FGSC A4]
Length = 636
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 232/485 (47%), Gaps = 95/485 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ S P+ K ++ E + E
Sbjct: 47 MSAILSADDLNDFISPGVACIKPVE----SLPQ---KQSNENPYEVTTEDKVQPENPPPA 99
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTI--------- 116
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + + S EN I
Sbjct: 100 QISLTDCLACSGCVTSAEAVLISLQSHNEVLNTLDAQPEIRLVSGENGTVIEDSGRTRDE 159
Query: 117 ----VLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKR-----------LGVDLVLDVGIA 161
V S++ Q SL A + +S ++ + F G V+D
Sbjct: 160 GRIFVASVSPQVRASLAATYGVSEKEANHIIHQFLSGPNGLRAGGKHGSGFSWVVDTNSL 219
Query: 162 HCFSLVELENEFLDRFLSGGGP---LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVM 218
LV +E + P + +S CPGW+CYAEK+H FILP++SR+KSPQ +
Sbjct: 220 REAVLVLTADEVSESLTGSSAPKRPILSSACPGWICYAEKTH-PFILPHLSRLKSPQALT 278
Query: 219 GSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELG----------YRDVD 268
G+ +KT +++KLGV S I+H+++MPC+DKKLEASR + + RDVD
Sbjct: 279 GTFLKTVISKKLGVPASRIWHLSIMPCFDKKLEASREELTDAAWNRLSSGEPNTPVRDVD 338
Query: 269 CVITAVELEVLLANE------LATTTLQEE-----KDGILD-WPWDEHNPHRMLLVNGTG 316
CVIT+ EL L ++ L +L + D L+ + + E + R +GT
Sbjct: 339 CVITSRELLSLASSRGISLPNLPRKSLPQSLRLPFPDPALNVFLFSEKSFSRQTSASGT- 397
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVTLRFCIANGFRNIQ 374
SGGY HNVL + + PG V + RN D+ + T G+ L+ GFRNIQ
Sbjct: 398 SGGYLHNVL-LSFQARNPGSEIVTQRG--RNADVVDYTLMSPEGEPILKAARYYGFRNIQ 454
Query: 375 NLIQKLKR---KRLP-----------------------------YDFIEIMACPSGCLNG 402
NL++KLK RLP Y ++E+MACP GC NG
Sbjct: 455 NLVRKLKPARVSRLPGAKVATGQTAGGRRQPISRNGASAGSSMDYAYVEVMACPGGCTNG 514
Query: 403 GAQIR 407
G QIR
Sbjct: 515 GGQIR 519
>gi|367019132|ref|XP_003658851.1| hypothetical protein MYCTH_2295162 [Myceliophthora thermophila ATCC
42464]
gi|347006118|gb|AEO53606.1| hypothetical protein MYCTH_2295162 [Myceliophthora thermophila ATCC
42464]
Length = 590
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 233/488 (47%), Gaps = 92/488 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQD--DGAYIQETNGREE 60
S +L DL+DFI P CIKP+ P + PS + + DG T
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPAQPPSSSEQPQSLEFEVILDGQQPSATGASTN 60
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVM---------KVIRENNA------- 104
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ ++ R+++
Sbjct: 61 A--PAQISLTDCLACSGCVTSAEAVLVSLQSHNEVLSMLDSAPALRITRDSDGGSYGAGK 118
Query: 105 HKASSNEN--TKTIVLSLAIQPVLSLGA---------KFALSHEQVVAKLCGFFKRL--- 150
K S E+ K V S++ Q +L A + EQ++ G
Sbjct: 119 FKVSGLEDPAAKLFVASVSPQTRANLAAACGGGVTARQAGWMIEQLLMGPAGLAAGGKHG 178
Query: 151 -GVDLVLDVGIAHCFSLVELENEFLDRFLSGGG------PLFTSECPGWVCYAEKSHGEF 203
G V+D A LV +E L R G P+ TS CPGWVCYAEK+H +
Sbjct: 179 NGFTWVVDTNTAREACLVLGSDEVLGRREGQGSSDSPTPPVLTSSCPGWVCYAEKTH-PY 237
Query: 204 ILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL- 262
+LP++SRVKSPQ +MG+++KT L+ LG+ P I+H+ +MPC+DKKLEASR + +
Sbjct: 238 VLPHLSRVKSPQALMGTMLKTALSRLLGIPPDRIWHLAVMPCFDKKLEASREELTDAVWA 297
Query: 263 -------GYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP--------- 306
G RDVDCVIT+ E+ ++LA K + P + +P
Sbjct: 298 GSGKPGKGVRDVDCVITSKEV-LMLAASRGVDFFGLPKSAPVQQP-EFPDPTIQRFLFPA 355
Query: 307 -HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT--CGDVTLR 363
HR + SGG H +L H ++ PG ++ RN D+ E + G+ +
Sbjct: 356 QHRKQVREEGTSGGNLHYIL-HDVQSRHPGSR--IQMARGRNADVFEYSVVKPSGEAAFK 412
Query: 364 FCIANGFRNIQNLIQKL---KRKRLP-------------------YDFIEIMACPSGCLN 401
GFRNIQNL++KL K R+P Y ++E+MACP GC N
Sbjct: 413 AARYYGFRNIQNLVRKLKPAKPSRMPGGKPVGSARRPGSKSAGLDYAYVEVMACPGGCTN 472
Query: 402 GGAQIRNE 409
GG QI+ +
Sbjct: 473 GGGQIKAD 480
>gi|115391081|ref|XP_001213045.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|121739525|sp|Q0CR17.1|NAR1_ASPTN RecName: Full=Cytosolic Fe-S cluster assembly factor nar1; AltName:
Full=Nuclear architecture-related protein 1
gi|114193969|gb|EAU35669.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 599
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 168/538 (31%), Positives = 246/538 (45%), Gaps = 117/538 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKPI P ++P ++ +D + E
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIESLPSKQPQKSDNPYEVTTED--------KVQAENP 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAH----------------K 106
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + +AH +
Sbjct: 53 TPAQISLTDCLACSGCVTSAEAVLISLQSHTEVLNTL---DAHPELRLIQNEQGTSLDPR 109
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKL-----------CGFFKRLGVDLV 155
++ ++ + V S++ Q SL A + +S ++ + + G G V
Sbjct: 110 SAQDDEGRIFVASVSPQVRASLAATYGVSEKEATSIIHQLLSGPHGLRAGGKHGSGFTWV 169
Query: 156 LDVGIAHCFSLVELENEFLDRFLSGGG-------PLFTSECPGWVCYAEKSHGEFILPYI 208
+D I LV +E D S P+ +S CPGWVCYAEK+H FILP++
Sbjct: 170 IDTNIMREAVLVLTADEVSDTLASEAKDPSLPKKPIVSSACPGWVCYAEKTH-PFILPHL 228
Query: 209 SRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD------------ 256
S++KSPQ + G+L+K+ L++ LGV S I+H+ +MPC+DKKLEASR +
Sbjct: 229 SKLKSPQALAGTLLKSTLSKTLGVPVSRIWHLAVMPCFDKKLEASREELTDVTWNPADGQ 288
Query: 257 -FYNEELGYRDVDCVITAVELEVLLANE-----------LATTTLQEEKDGILDWPWDEH 304
F + RDVDCVIT EL L + + + + D+ + +
Sbjct: 289 MFSQPQTPVRDVDCVITTRELLTLASARGISLPSILSKSSSVSFPSFPDKALDDYLFSKR 348
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI---REATFTCGDVT 361
+ ++ GT SGGY H+VL+ + + PG V E RN D+ + + G +
Sbjct: 349 SLSAQSMMTGT-SGGYLHHVLT-SFQARNPGSEIVAERG--RNADVVVYKLVSPENGSI- 403
Query: 362 LRFCIANGFRNIQNLIQKLK-------------------------------RKRLPYDFI 390
+ GFRNIQNL+ KLK + + Y ++
Sbjct: 404 IEAARYYGFRNIQNLVNKLKPPEMSKLSGARRNDALGGKARMQLSSRKAAAKTKFDYAYV 463
Query: 391 EIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLG 448
E+MACP GC NGG QIR E TA + A S+P H +AWL
Sbjct: 464 EVMACPGGCTNGGGQIRIEDAREANLTAQTGTPADTNGAASKPS-----PHEQRAWLA 516
>gi|302679346|ref|XP_003029355.1| hypothetical protein SCHCODRAFT_257986 [Schizophyllum commune H4-8]
gi|300103045|gb|EFI94452.1| hypothetical protein SCHCODRAFT_257986 [Schizophyllum commune H4-8]
Length = 687
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 177/297 (59%), Gaps = 26/297 (8%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIP-IEKP--SGPRTGAKIRIQDDGAYIQETNGRE--- 59
FSG L LTDL+DFI PSQ CIKP+ KP + +I I GAY + ++ E
Sbjct: 3 FSGALTLTDLNDFITPSQACIKPVTETNKPEKDASQAATEIHIDSTGAYYEVSSATETTQ 62
Query: 60 -EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVL 118
KL++ +I+L DCLACSGCITSAESVLIT QSH EV+ + +A+ + V+
Sbjct: 63 GRKLEQAQINLNDCLACSGCITSAESVLITLQSHIEVLAFV---DANPPPGQSGHRIPVM 119
Query: 119 SLAIQPVLSLGAKFALSH---EQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLVELENEFL 174
S+A Q + SL A + + Q++ ++ F + +G + V D A +L E E+
Sbjct: 120 SIAPQVLASLSASVSSTTVSPRQMLRRVRSFCRSNMGFEAVFDTTFARHLALRETVAEWK 179
Query: 175 DRFLSGGG---------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
R + G P+ S CPGW+CYAEK+H E +LPYIS+ KSPQQ+MG+L+K
Sbjct: 180 QRRDAARGGKVDGIDPLPMIASACPGWICYAEKTHAE-MLPYISKTKSPQQIMGTLVKQW 238
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFY--NEELGYRDVDCVITAVELEVLL 280
+ E+ G HP IYH+ +MPCYDKKLEASR DF + R+VDCVITA E E +L
Sbjct: 239 IGERCGAHPDDIYHLAVMPCYDKKLEASRQDFVAAHPHEAVREVDCVITAGEFEGML 295
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 386 PYDFIEIMACPSGCLNGGAQIRNEKVA 412
PYD++E+MACP GC+NGG QI+ + A
Sbjct: 563 PYDYVEVMACPGGCVNGGGQIKPTRAA 589
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE---- 352
++ P EH +L GT SG Y H ++SH +++ G +E + RN D E
Sbjct: 404 VNLPKFEHLFPELLTHPGTSSGSYLHAIVSHIMQENPSGVQ--LELRKGRNDDFVEYIIR 461
Query: 353 ---ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLP 386
+ G+V + GFRN+QNL++K+ + P
Sbjct: 462 RPAESSMLGEVLFKGAKCYGFRNLQNLVRKVGKPSKP 498
>gi|259511479|sp|Q5B748.2|NAR1_EMENI RecName: Full=Cytosolic Fe-S cluster assembly factor nar1; AltName:
Full=Nuclear architecture-related protein 1
gi|259481839|tpe|CBF75735.1| TPA: iron-sulfur cluster assembly associated protein Nar1, putative
(AFU_orthologue; AFUA_4G11960) [Aspergillus nidulans
FGSC A4]
Length = 590
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 232/485 (47%), Gaps = 95/485 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ S P+ K ++ E + E
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVE----SLPQ---KQSNENPYEVTTEDKVQPENPPPA 53
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTI--------- 116
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + + S EN I
Sbjct: 54 QISLTDCLACSGCVTSAEAVLISLQSHNEVLNTLDAQPEIRLVSGENGTVIEDSGRTRDE 113
Query: 117 ----VLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKR-----------LGVDLVLDVGIA 161
V S++ Q SL A + +S ++ + F G V+D
Sbjct: 114 GRIFVASVSPQVRASLAATYGVSEKEANHIIHQFLSGPNGLRAGGKHGSGFSWVVDTNSL 173
Query: 162 HCFSLVELENEFLDRFLSGGGP---LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVM 218
LV +E + P + +S CPGW+CYAEK+H FILP++SR+KSPQ +
Sbjct: 174 REAVLVLTADEVSESLTGSSAPKRPILSSACPGWICYAEKTH-PFILPHLSRLKSPQALT 232
Query: 219 GSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELG----------YRDVD 268
G+ +KT +++KLGV S I+H+++MPC+DKKLEASR + + RDVD
Sbjct: 233 GTFLKTVISKKLGVPASRIWHLSIMPCFDKKLEASREELTDAAWNRLSSGEPNTPVRDVD 292
Query: 269 CVITAVELEVLLANE------LATTTLQEE-----KDGILD-WPWDEHNPHRMLLVNGTG 316
CVIT+ EL L ++ L +L + D L+ + + E + R +GT
Sbjct: 293 CVITSRELLSLASSRGISLPNLPRKSLPQSLRLPFPDPALNVFLFSEKSFSRQTSASGT- 351
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVTLRFCIANGFRNIQ 374
SGGY HNVL + + PG V + RN D+ + T G+ L+ GFRNIQ
Sbjct: 352 SGGYLHNVL-LSFQARNPGSEIVTQRG--RNADVVDYTLMSPEGEPILKAARYYGFRNIQ 408
Query: 375 NLIQKLKR---KRLP-----------------------------YDFIEIMACPSGCLNG 402
NL++KLK RLP Y ++E+MACP GC NG
Sbjct: 409 NLVRKLKPARVSRLPGAKVATGQTAGGRRQPISRNGASAGSSMDYAYVEVMACPGGCTNG 468
Query: 403 GAQIR 407
G QIR
Sbjct: 469 GGQIR 473
>gi|226290159|gb|EEH45643.1| iron-sulfur cluster assembly associated protein Nar1
[Paracoccidioides brasiliensis Pb18]
Length = 629
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 257/546 (47%), Gaps = 116/546 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P E ++ +D IQ N
Sbjct: 1 MSAILSSDDLNDFISPGVACIKPVETLPEEDSKNQENAYEVTTEDK---IQAGNP----- 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIR---ENNAH-------------- 105
+ISLTDCLACSGC+TSAE+VL++ QSH EV+K + E H
Sbjct: 53 PAAQISLTDCLACSGCVTSAEAVLVSLQSHSEVLKTLDSCPELQIHNQKICGSQSSRPDV 112
Query: 106 ------KASSNENTKTIVLSLAIQPVLSLGAKFALSH-------EQVV----------AK 142
+ S + K + S++ Q SL A F +S EQ + A
Sbjct: 113 PCSAEGQTCSADGRKIFIASVSPQVRASLAATFGISERKAGYLIEQFLSGPQGLRAGGAH 172
Query: 143 LCGFFKRLGVDLV----LDVGIAHCFSLVELENEFL--DRFLSGGGPLFTSECPGWVCYA 196
GF + +++ L++G+ +E+ + + F P+ +S CPGW+CYA
Sbjct: 173 GSGFTWVVDTNVMRNVCLELGVTEVKESLEISGNTISGEEFPVPKRPILSSICPGWICYA 232
Query: 197 EKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD 256
EK+H +LP++SR+KSPQ + G+L+K+ L + L + P HI+H+ +MPC+DKKLEASR +
Sbjct: 233 EKTH-PHVLPHMSRIKSPQALTGTLLKSVLRKALNISPCHIWHLAIMPCFDKKLEASRQE 291
Query: 257 FYN---EELGY-------RDVDCVITAVELEVLLANE-----------LATTTLQEEKDG 295
N + L + RDVDCVIT+ EL +L + L +++ D
Sbjct: 292 LTNASWQGLSWTESHTPVRDVDCVITSRELLMLATSRNISLLNLPMKPLPPSSITPFPDT 351
Query: 296 ILD-WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREAT 354
L+ + + + PH G SGGY +++L+ R+ PG ++ + RN D+ E
Sbjct: 352 YLERFLFPKSLPHAQCPAAGP-SGGYLYHILTTYQRR-NPGSH--IQTQRGRNSDVIEYA 407
Query: 355 FT--CGDVTLRFCIANGFRNIQNLIQKLK---RKRLP----------------------- 386
T GD ++ GFRNIQNL++KLK RLP
Sbjct: 408 LTSNSGDTIIKAARYYGFRNIQNLVRKLKPPRTSRLPGAKPIIARKAAGAGSAAGNASVT 467
Query: 387 -YDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETIL---CDLAKSEPRENATLEHL 442
Y +IE+MACP GC NGG QIR E LE + + D A+ + + H
Sbjct: 468 DYSYIEVMACPGGCTNGGGQIRVEDAREINPPKLEEQPSIQASVDPAQLQQSTSKPTPHE 527
Query: 443 YKAWLG 448
+AWL
Sbjct: 528 QRAWLA 533
>gi|331245344|ref|XP_003335309.1| hypothetical protein PGTG_17089 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309314299|gb|EFP90890.1| hypothetical protein PGTG_17089 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 571
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 242/488 (49%), Gaps = 90/488 (18%)
Query: 2 ASSRFSGVLQLTDLDDFIGPSQECIKP-IPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
+S+ FS L L DL+D++GPSQ C KP IP + + +K +I D + + E
Sbjct: 6 SSNSFSHSLNLIDLNDYLGPSQLCTKPNIPTTQEQQQPSLSKTQILLDD-HPPPSTKVTE 64
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
L K +I+L DCLACSGCITS+ES+L++ QS EV K I++ N + S ++ ++ +
Sbjct: 65 SLPKAQITLNDCLACSGCITSSESILVSLQSVLEVRKEIQQPNRYPIVSI-SSHSLASFV 123
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD----- 175
A + SL F +V+ K F + LVLD + L+E + EF +
Sbjct: 124 AYNQLDSLSTGF-----KVLKKY--FTRSHNFALVLDTSFSQRLHLLESQREFKEHRRRQ 176
Query: 176 ---RFLSGGGPLFTSECPGWVCYAEKSHGEF-ILPYISRVKSPQQVMGSLIKT-HLAEKL 230
+ G PL S CP W+CYAEK+ G+ IL ISRVKS QQ+ GSL+K+ AE +
Sbjct: 177 KEAKVSGGKAPLLASSCPAWICYAEKTQGKNGILEMISRVKSAQQIQGSLLKSPRFAESV 236
Query: 231 GVHPSH-IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE----LA 285
G+ + IYHV +M CYDKKLEASR+DF ++E G +DVDCV+T E++ ++ + L
Sbjct: 237 GLGSAEPIYHVCVMSCYDKKLEASRSDFQSDE-GIKDVDCVLTTREVQEMIQEDGFDILQ 295
Query: 286 TTTLQEEKDGILDWP-----WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE---- 336
EE LD W +H P G+ SGGY N+L R P +
Sbjct: 296 AAQETEESGQTLDSQVGIPIWIDHPPPI-----GSSSGGYLFNLL----RASVPTDRGNI 346
Query: 337 -------------SPVVEFK-----PLRNPDIREATFTCGDVTLRFCIANGFRNIQNLIQ 378
S VE++ + DI++ + + GF+N+QNLI+
Sbjct: 347 IDRLRLTVDRKRGSDYVEYRLQLAHASSSQDIQDIPTQEPETLFYGALFYGFKNLQNLIR 406
Query: 379 KLK----------RKRL------------------PYDFIEIMACPSGCLNGGAQIRNEK 410
K+ R R+ YDF+E+MACPSGC+NGG QI
Sbjct: 407 KIAPPSSSSTTNPRARIMGRRRKDQGVEAAKEADRTYDFVEVMACPSGCVNGGGQIPFGS 466
Query: 411 VASPKETA 418
P +A
Sbjct: 467 QPGPSSSA 474
>gi|239608619|gb|EEQ85606.1| iron-sulfur cluster assembly associated protein Nar1 [Ajellomyces
dermatitidis ER-3]
gi|327353755|gb|EGE82612.1| iron-sulfur cluster assembly associated protein Nar1 [Ajellomyces
dermatitidis ATCC 18188]
Length = 621
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/506 (32%), Positives = 237/506 (46%), Gaps = 112/506 (22%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGR--EEKLK 63
S +L DL+DFI P CIKPI + P K + AY T + E L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIE----TLPHKEVK---NSENAYEVTTEDKIEPENLP 53
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKV--------IRENNAH---------- 105
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ I E N H
Sbjct: 54 PAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDSCPELRIDERNGHGVAQTLRDDA 113
Query: 106 -------KASSNENTKTIVLSLAIQPVLSLGAKFALSHEQ---VVAKLCGFFKRL----- 150
++ + + K + S++ Q SL A + +S + ++ + G + L
Sbjct: 114 GFSAAGQQSIAEGDKKIFIASVSPQVRASLAATYGISERKAGWLIEQFLGGPQGLRAGGA 173
Query: 151 ---GVDLVLDVGIAHCFSLVELENEFLDRFLSGGGP-----------LFTSECPGWVCYA 196
G V+D + L NE ++ G P + +S CPGW+CYA
Sbjct: 174 HGNGFAWVVDTNVMRQVFLELSVNEVMESLEDSGSPSLEGFPIPKRPVLSSACPGWICYA 233
Query: 197 EKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD 256
EK+H +LP+ISR+KSPQ + G+L+KT L++ L + P+ I+H+ +MPC+DKKLEASR +
Sbjct: 234 EKTH-PHVLPHISRLKSPQALTGTLLKTVLSKALNISPAQIWHLAIMPCFDKKLEASRQE 292
Query: 257 FYNEELG---------YRDVDCVITAVELEVLLANE------LATTTLQEEKDGILDWPW 301
+ RDVDCVIT+ E+ +L + L L + P+
Sbjct: 293 LTDASWQSSSSTTHSPVRDVDCVITSREVLMLATSRNISLQNLPLQPLPSSYTPLFPDPY 352
Query: 302 ------DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
+ P GT SGGY ++L+ A + PG ++ + RN D+ E +
Sbjct: 353 LASFLFPKSGPSTQPSTAGT-SGGYLFHILT-AYQHRNPGSQ--IQTQRGRNSDVIEYSL 408
Query: 356 T--CGDVTLRFCIANGFRNIQNLIQKLK---RKRLP------------------------ 386
T GD ++ GFRNIQNL++KLK RLP
Sbjct: 409 TSPSGDTIIKAARYYGFRNIQNLVRKLKPPRASRLPGAKPMIGRRAGSGRATAANNTSAT 468
Query: 387 -YDFIEIMACPSGCLNGGAQIRNEKV 411
Y ++E+MACP GC NGG QIR E V
Sbjct: 469 DYAYVEVMACPGGCTNGGGQIRVEDV 494
>gi|70993576|ref|XP_751635.1| iron-sulfur cluster assembly associated protein Nar1 [Aspergillus
fumigatus Af293]
gi|74671683|sp|Q4WQ87.1|NAR1_ASPFU RecName: Full=Cytosolic Fe-S cluster assembly factor nar1; AltName:
Full=Nuclear architecture-related protein 1
gi|259511264|sp|B0Y4F9.1|NAR1_ASPFC RecName: Full=Cytosolic Fe-S cluster assembly factor nar1; AltName:
Full=Nuclear architecture-related protein 1
gi|66849269|gb|EAL89597.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Aspergillus fumigatus Af293]
gi|159125441|gb|EDP50558.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Aspergillus fumigatus A1163]
Length = 597
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 241/530 (45%), Gaps = 105/530 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAY--IQETNGREEKLK 63
S +L DL+DFI P CIKP+ + + Q + Y +E + E L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPV--------ESLPQKESQSENPYEVTKEDKVQPENLP 52
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI-------------RENNAHKASSN 110
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + + S++
Sbjct: 53 PAQISLTDCLACSGCVTSAEAVLISLQSHTEVLNTLDSYPELPLGSTSYQRGTQKVGSAD 112
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRL-----------GVDLVLDVG 159
+ + V S++ Q SL A + ++ + + F G V+D
Sbjct: 113 SDGRIFVASVSPQVRASLAATYGITEREAKYMIDQFLMGPHGLRAGGKHGNGFTWVVDTN 172
Query: 160 IAHCFSLVELENEFLDRFLSGG------GPLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
+ L +E LS G P+ +S CPGW+CYAEK+H FILP++SR+KS
Sbjct: 173 VMREAVLALTADEVTSSLLSTGSGSLPKSPILSSACPGWICYAEKTH-PFILPHLSRLKS 231
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN----------EELG 263
PQ + G+ +K+ L++ LGV PS I+H+ +MPC+DKKLEASR + + +
Sbjct: 232 PQALSGTFLKSVLSKALGVPPSQIWHLAIMPCFDKKLEASREELTDIAWASTFTQSQTTP 291
Query: 264 YRDVDCVITAVELEVLLANE-----------LATTTLQEEKDGILDWPWDEHNPHRMLLV 312
RDVDCVIT EL L L + L D L+ + +
Sbjct: 292 VRDVDCVITTRELLTLATARGLSLPNLPLKPLPASCLTPFPDQALESFLFSKSSSGQTVE 351
Query: 313 NGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVTL-RFCIANGF 370
+GT SGGY H+VL + PG V + RN D+ E + GD L R GF
Sbjct: 352 SGT-SGGYLHHVL-QIFQARNPGSKIVTQRG--RNADVVEYVLMSSGDEPLFRAARYYGF 407
Query: 371 RNIQNLIQKLKR---KRLP-----------------------------YDFIEIMACPSG 398
RNIQNL++KLK RLP Y ++E+MACP G
Sbjct: 408 RNIQNLVRKLKPARVSRLPGAKPQAVSSSANRRQPMSRNAAPAGTGADYAYVEVMACPGG 467
Query: 399 CLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLG 448
C NGG QIR E AL+ + +A +P H +AWL
Sbjct: 468 CTNGGGQIRIEDAREAVPNALKETSTETPVAAPKP-----TPHEQRAWLA 512
>gi|302502469|ref|XP_003013225.1| hypothetical protein ARB_00410 [Arthroderma benhamiae CBS 112371]
gi|291176788|gb|EFE32585.1| hypothetical protein ARB_00410 [Arthroderma benhamiae CBS 112371]
Length = 597
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 253/538 (47%), Gaps = 121/538 (22%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ T K + ++ E E+
Sbjct: 1 MSAILSADDLNDFISPGVACIKPV--------ETLPKKQEENPYEVTTEDKLEEQNPPPA 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIREN-----NAHKASSNENTKTIVLSL 120
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + N + + + + K V S+
Sbjct: 53 QISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDANPEIRLDGGGRTEDRDGKIFVASV 112
Query: 121 AIQPVLSLGAKFALSH-------EQVVAKLCGFFK----RLGVDLVLDVGIAHCFSLVEL 169
+ Q SL A + +S EQ ++ G G V+D I +++EL
Sbjct: 113 SPQVRASLAATYGISEKNAGYMIEQFLSGPNGLRAGGQHGSGFTWVVDTNIMRQ-AVLEL 171
Query: 170 ENEFLDRFLSGGG----------------PLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
+ + L+ P+ S CPGW+CYAEK+H +LP++SR+KS
Sbjct: 172 STDEVTESLNDAAPTTSHDESGKFSLPNRPILASSCPGWICYAEKTH-PHVLPHLSRLKS 230
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN-----EELG----- 263
PQ +MG+ +KT +++KL + PS ++H+ +MPC+DKKLEASR + + E L
Sbjct: 231 PQALMGTFLKTIISKKLNISPSQVWHLAIMPCFDKKLEASRQELTDVSWRGEALDKASSP 290
Query: 264 YRDVDCVITAVELEVLLA--NELATTTLQEEKDGILDWPWDEHNPHRMLLVNGT------ 315
RDVDCVIT+ EL +L + N + E L P+ + + L N T
Sbjct: 291 VRDVDCVITSKELLMLASSRNISLPSLPLEPLPTHLSTPFPDQTIAQFLSNNNTLHSTQP 350
Query: 316 ----GSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--TCGDVTLRFCIANG 369
SGGY H++L+ Q +S +++ + RN D+ E T G+ ++ G
Sbjct: 351 AAAGPSGGYLHHLLT--TYQSKHADS-IIQSQRGRNADVVEYTLVSATGEPIIKAARYYG 407
Query: 370 FRNIQNLIQKLK---RKRLP-----------------------------YDFIEIMACPS 397
FRNIQNL++KLK RLP + ++E+MACP
Sbjct: 408 FRNIQNLVRKLKPARASRLPGSRVNGSGARARPAPVSNGKPGAPIPPTEFAYVEVMACPG 467
Query: 398 GCLNGGAQIR-------NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLG 448
GC NGG QIR N +A P+ +ALE +K P H +AWL
Sbjct: 468 GCTNGGGQIRLEDARQANSSLALPEGSALE------QTSKPTP-------HDQRAWLA 512
>gi|327295534|ref|XP_003232462.1| iron-sulfur cluster assembly associated protein Nar1 [Trichophyton
rubrum CBS 118892]
gi|326465634|gb|EGD91087.1| iron-sulfur cluster assembly associated protein Nar1 [Trichophyton
rubrum CBS 118892]
Length = 597
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 261/548 (47%), Gaps = 117/548 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ T K + ++ E E+
Sbjct: 1 MSAILSADDLNDFISPGVACIKPV--------ETLPKKQEENPYEVTTEDKLEEQNPPPA 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKV------IRENNAHKASSNENTKTIVLS 119
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ IR + +A + + K V S
Sbjct: 53 QISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDANPEIRLDGGGRAEAGDG-KLFVAS 111
Query: 120 LAIQPVLSLGAKFALSH-------EQVVAKLCGFFKR----LGVDLVLDVGIAHCFSLVE 168
++ Q SL A + +S EQ ++ G G V+D I +++E
Sbjct: 112 VSPQVRASLAATYGISEKNAGYMIEQFLSGPNGLRAGGQHGSGFAWVVDTNIMRQ-AVLE 170
Query: 169 LENEFLDRFLSGGG----------------PLFTSECPGWVCYAEKSHGEFILPYISRVK 212
L + L+ P+ S CPGW+CYAEK+H +LP++SR+K
Sbjct: 171 LSTAEVTESLNAAASTTSHDESGKFSLPNRPILASSCPGWICYAEKTH-PHVLPHLSRLK 229
Query: 213 SPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN-----EELGY--- 264
SPQ + G+ +KT +++KL + PS ++H+ +MPC+DKKLEASR + + E L
Sbjct: 230 SPQALTGTFLKTIISKKLNISPSQVWHLAIMPCFDKKLEASRQELTDVSWRGEALDMASS 289
Query: 265 --RDVDCVITAVELEVLLANE-LATTTLQEEK-DGILDWPWDEHNPHRMLLVNGT----- 315
RDVDCVIT+ EL +L ++ ++ +L E L P+ + + L N T
Sbjct: 290 PIRDVDCVITSKELLMLASSRNISLPSLPREPLPTHLSTPFPDQTIAQFLSTNNTLHFTQ 349
Query: 316 -----GSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--TCGDVTLRFCIAN 368
SGGY H++L+ Q +S +++ + RN D+ E T G+ ++
Sbjct: 350 PAAAGPSGGYLHHLLT--TYQSKHADS-IIQSQRGRNADVVEYTLVSAAGEPIIKAARYY 406
Query: 369 GFRNIQNLIQKLK---RKRLP-----------------------------YDFIEIMACP 396
GFRNIQNL++K+K RLP + ++E+MACP
Sbjct: 407 GFRNIQNLVRKMKPARASRLPGSRVNGPGARARSAPVSNGKPGAPTPPTEFSYVEVMACP 466
Query: 397 SGCLNGGAQIR-------NEKVASPKETALELETILCDLAKSEPREN-ATLEHLYKAWLG 448
GC NGG QIR N +A P+ +ALE +K P + A L + +A+
Sbjct: 467 GGCTNGGGQIRLEDARQANSSLALPEGSALE------QTSKPTPHDQRAWLARVDEAYYS 520
Query: 449 GKSTDKGK 456
S D G+
Sbjct: 521 DSSEDGGQ 528
>gi|425766147|gb|EKV04773.1| Iron-sulfur cluster assembly associated protein Nar1, putative
[Penicillium digitatum Pd1]
gi|425774549|gb|EKV12852.1| Iron-sulfur cluster assembly associated protein Nar1, putative
[Penicillium digitatum PHI26]
Length = 604
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 253/540 (46%), Gaps = 120/540 (22%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ P + + +D E + E L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPPKDSK-----KTEDAYEVTTEDKVQPENLPPA 55
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMK---------VIRENNAHKASSNENT--- 113
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ ++ E++ ++ E++
Sbjct: 56 QISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAHPEIPLVHEHHGVTVNNIEDSGEG 115
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQ---VVAKLC--------GFFKRLGVDLVLDVGIAH 162
K V S++ Q SL + +S ++ ++ +L G R G V+D
Sbjct: 116 KIFVASVSPQVRASLATIYGISEKEAGYMINQLLSGPQGLRGGGKHRNGFTWVVDTNAMR 175
Query: 163 CFSLVELENEFLDRFLSGGG-------------PLFTSECPGWVCYAEKSHGEFILPYIS 209
LV +E D SG P+ +S CPGW+CYAEK+H FILP++S
Sbjct: 176 EAVLVLTADEVSDSLSSGDSSTAGQSDDPLPKRPILSSACPGWICYAEKTH-PFILPHLS 234
Query: 210 RVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN---------- 259
R+KSPQ + G+ +KT L++ LGV+PS I+H+ +MPC+DKKLEASR + +
Sbjct: 235 RLKSPQALSGTFLKTVLSKSLGVNPSRIWHLAVMPCFDKKLEASREELTDVSWRQGNSTA 294
Query: 260 -EELGYRDVDCVITAVELEVLLANE-------------LATTTLQEEK--DGILDWPWDE 303
E RDVDCVITA EL L ++ + T EK D L + E
Sbjct: 295 SETQPVRDVDCVITARELLSLASSRGFSLPSLPLQPLPSSFTPPFPEKILDSFLSF---E 351
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVT 361
+ + + GT SGGY H++L + + PG V+ RN D+ E G
Sbjct: 352 RSRAKQSIATGT-SGGYLHHILMN-FQARNPGSELVINRG--RNVDVVEYVLLSQEGPTI 407
Query: 362 LRFCIANGFRNIQNLIQKLKR---KRLP-----------------------------YDF 389
L+ GFRNIQNL++KLK RLP Y +
Sbjct: 408 LKAARYYGFRNIQNLVRKLKPARVSRLPGAKPAARPATGRRQPISRNNVTTSSSGADYAY 467
Query: 390 IEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLA-KSEPRENATLEHLYKAWLG 448
+E+MACP GC NGG QIR E KE + + D + K P E +AWL
Sbjct: 468 VEVMACPGGCTNGGGQIRVEDA---KEAIGSSQGMALDASMKPSPHEQ-------RAWLA 517
>gi|405122167|gb|AFR96934.1| iron hydrogenase [Cryptococcus neoformans var. grubii H99]
Length = 650
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 214/421 (50%), Gaps = 55/421 (13%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPI-EKPSGPRTGAKIRIQDDGAYIQETN-------- 56
FSG L +TDLDDF+ PSQ CI P+ +KP+ +I I + Y + +
Sbjct: 3 FSGALTITDLDDFLTPSQACIIPVRNNKKPAQDEGPTEIHIDSNNNYYEVSTYPSVGHDD 62
Query: 57 ---GREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIREN--NAHKASSNE 111
++ L+K EI+L DCLACSGCITS ES+LIT QS E+++ I+ N S
Sbjct: 63 GIENSKKALEKAEINLNDCLACSGCITSTESLLITMQSQNEILQFIKTNPTTTDPDSPCH 122
Query: 112 NTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRL---------GVDLVLDVGIAH 162
+ +LS++ Q + SL A +A + + L +R+ G V D A
Sbjct: 123 KPRLPILSISPQTLASLSAAYATASSRHPIPLLVLLRRIRTFLSQPENGSWRVWDTTFAR 182
Query: 163 CFSLVELENEFLDR------FLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
SL E EF +R + P+ S CPGWVCYAEK+ G+ +LP +S +S Q
Sbjct: 183 HMSLRESVMEFHERKDEKEKGKAAEMPMLASACPGWVCYAEKAQGD-MLPLLSAARSSQG 241
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL 276
++G+L K+ KL P IYHVT MPCYDKKLEASR+DFY+ RDVDCV+T EL
Sbjct: 242 IIGALAKSWYGPKLQYKPDEIYHVTAMPCYDKKLEASRSDFYSSLYSTRDVDCVLTTGEL 301
Query: 277 EVLL-----------ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVL 325
++LL ANE + E D+P+ E +L G+ SG Y ++
Sbjct: 302 DLLLQELGFNPHVPVANESTPSYSATE-----DYPFPE-----LLTHEGSSSGSYLQTII 351
Query: 326 SHAIRQLCPGESPVVEFKPLRNPDIREATF---TCGDVTLRFCIANGFRNIQNLIQKLKR 382
H +++ P + + + + D E G V + GFRN+QNL++K+ +
Sbjct: 352 -HDVQRSHPNPTRITTREIRGSTDNIEYLIQDTVTGQVIFKGAKVYGFRNLQNLVRKVAK 410
Query: 383 K 383
+
Sbjct: 411 E 411
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 388 DFIEIMACPSGCLNGGAQIR 407
DF+E+MACP GC+NGG Q++
Sbjct: 473 DFVEVMACPGGCVNGGGQMK 492
>gi|19075809|ref|NP_588309.1| iron hydrogenase (predicted) [Schizosaccharomyces pombe 972h-]
gi|74626311|sp|Q9Y7N7.1|NAR1_SCHPO RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1 homolog;
AltName: Full=Nuclear architecture-related protein 1
homolog
gi|4581520|emb|CAB40177.1| iron hydrogenase (predicted) [Schizosaccharomyces pombe]
Length = 538
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 262/561 (46%), Gaps = 119/561 (21%)
Query: 10 LQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAY-IQETNGREEKLKKVEIS 68
L + DL+DF+ P CIKP ++K + IRI D Y + + G +L IS
Sbjct: 4 LSVNDLNDFLSPGAVCIKPAQVKKQ---ESKNDIRIDGDAYYEVTKDTGETSELGIASIS 60
Query: 69 LTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
L DCLACSGCITSAE+VL+ QS++EV+K + S ++ + + +SL+ Q +L
Sbjct: 61 LNDCLACSGCITSAETVLVNLQSYQEVLKHLE--------SRKSQEILYVSLSPQVRANL 112
Query: 129 GAKFALSHEQVVAKL-CGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL--------- 178
A + LS +++ A L F +LG +LD + L + EF + +L
Sbjct: 113 AAYYGLSLQEIQAVLEMVFIGKLGFHAILDTNASREIVLQQCAQEFCNSWLQSRAHKNQN 172
Query: 179 ----------------------------SGGG-------PLFTSECPGWVCYAEKSHGEF 203
S G P+ +S CPGW+CY EK+H
Sbjct: 173 QVTNSVVNEHPLIPHSTSQISGVHSNTSSNSGINENAVLPILSSSCPGWICYVEKTHSNL 232
Query: 204 ILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELG 263
I P +SRV+SPQQ G ++K ++ + + ++H++LMPC+DKKLEASR +F E G
Sbjct: 233 I-PNLSRVRSPQQACGRILKDWAVQQFSMQRNDVWHLSLMPCFDKKLEASRDEF--SENG 289
Query: 264 YRDVDCVITAVEL----EVLLANELATTT----LQEEKDGILDW----PWDEHNPHRMLL 311
RDVD V+T EL + L + + T Q+ D I W ++E
Sbjct: 290 VRDVDSVLTPKELVEMFKFLRIDPIELTKNPIPFQQSTDAIPFWYPRITYEEQ------- 342
Query: 312 VNGTGSGGYAHNVLSHAIRQL--CPGESPVVEFKPLRNPDIREATFT---CGDVTLRFCI 366
G+ SGGY VLS+A + L P V +N D+ E T + +
Sbjct: 343 -IGSSSGGYMGYVLSYAAKMLFGIDDVGPYVSMNN-KNGDLTEYTLRHPETNEQLISMAT 400
Query: 367 ANGFRNIQNLIQK------------LKRKRL------------PYDFIEIMACPSGCLNG 402
GFRNIQNL+++ L +KR+ YD++E+MACP GC+NG
Sbjct: 401 CYGFRNIQNLVRRVHGNSSVRKGRVLLKKRVRSNAQNPTEEPSRYDYVEVMACPGGCING 460
Query: 403 GAQI---RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHML 459
G Q+ E++ S ++ ++E + + ++A + ++ + W+ K L
Sbjct: 461 GGQLPFPSVERIVSARDWMQQVEKLYYEPGTRSVDQSA-VSYMLEQWV--KDPTLTPKFL 517
Query: 460 NTSYHNIPKNN---IALNVKW 477
+TSY + +N + L KW
Sbjct: 518 HTSYRAVQTDNDNPLLLANKW 538
>gi|134115152|ref|XP_773874.1| hypothetical protein CNBH3260 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818340|sp|P0CP11.1|NAR1_CRYNB RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|50256502|gb|EAL19227.1| hypothetical protein CNBH3260 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 650
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 215/412 (52%), Gaps = 37/412 (8%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-PIEKPSGPRTGAKIRIQDDGAYIQ----------- 53
FSG L +TDLDDF+ PSQ CI P+ +KP+ +I I + Y +
Sbjct: 3 FSGALTITDLDDFLTPSQACIIPVRNNKKPAEDEGPTEIHIDSNNNYYEVSTYPSVGHDD 62
Query: 54 ETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNA--HKASSNE 111
+ ++ L+K EI+L DCLACSGCITS ES+LIT QS E+++ I+ N S
Sbjct: 63 DIGNSKKALEKAEINLNDCLACSGCITSTESLLITMQSQNEILEFIKTNPTVVDPESPCH 122
Query: 112 NTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRL---------GVDLVLDVGIAH 162
+ +LS++ Q + SL A +A + + L +R+ G V D A
Sbjct: 123 KPRLPILSISPQTLASLSAAYATASSRPPIPLLVLLRRIRAFLSQPEKGSWRVWDTTFAR 182
Query: 163 CFSLVELENEFLDR------FLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
SL E EF +R + P+ S CPGWVCYAEK+ G+ +LP +S +S Q
Sbjct: 183 HMSLRESVVEFHERKDKKEKGKAAEMPMLASACPGWVCYAEKAQGD-MLPLLSAARSSQG 241
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL 276
++G+L K+ KL P IYHVT MPCYDKKLEASR+DFY+ RDVDCV+T EL
Sbjct: 242 IIGALAKSWYGHKLQHKPDEIYHVTAMPCYDKKLEASRSDFYSSLYSTRDVDCVLTTGEL 301
Query: 277 EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPG 335
++LL + + + E +P LL + G+ SG Y ++ H +++ P
Sbjct: 302 DLLLQELGFDPHVPIANESTPSYSATEDSPFPELLTHEGSSSGSYLQTII-HDVQRSHPN 360
Query: 336 ESPVVEFKPLRNPD----IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRK 383
+ ++ + + D + + T T G V + GFRN+QNL++K+ ++
Sbjct: 361 PTRIITREIRGSTDNIEYLIQDTIT-GQVVFKGAKVYGFRNLQNLVRKVAKE 411
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 388 DFIEIMACPSGCLNGGAQIRNEKVASPKETALELE 422
DF+E+MACP GC+NGG Q++ A+E++
Sbjct: 473 DFVEVMACPGGCVNGGGQMKPTVPTPSAPEAMEVD 507
>gi|408398645|gb|EKJ77774.1| hypothetical protein FPSE_02008 [Fusarium pseudograminearum CS3096]
Length = 575
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 225/478 (47%), Gaps = 90/478 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKPI P P ++ I D N
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPSAPPPQSQSLETEVILDGQQPTANPNA----- 55
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN------------ 110
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + A + ++
Sbjct: 56 -PAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLTTLDSAPALRLVTDDSGKFTVEGLED 114
Query: 111 ENTKTIVLSLAIQPVLSLGAK--FALSHEQVVAKLCGFFKRL-GVD----------LVLD 157
EN K V S++ Q +L A +S QV L F+ GV V+D
Sbjct: 115 ENAKLFVASVSPQTRANLAAACGAGVSEAQVGHMLDNLFRGPEGVASGGKYNNEFAWVVD 174
Query: 158 VGIAHCFSLV----ELENEFLDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
A +LV E+ N + P+ S CPGWVCYAEK+H +LP+IS+VKS
Sbjct: 175 TNTAREATLVLGADEVHNPSQSTPATPAKPILASSCPGWVCYAEKTH-PHVLPHISKVKS 233
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL--------GYR 265
PQ +MG+L+KT L+ LG+ PS I+H+ +MPC+DKKLEASR + + G R
Sbjct: 234 PQALMGTLLKTTLSRTLGIAPSRIWHLAIMPCFDKKLEASREELTEDVWAEGEIRGRGVR 293
Query: 266 DVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH-----------RMLLVNG 314
DVDCVIT+ E+ ++LA K P + NP R L N
Sbjct: 294 DVDCVITSKEI-LMLAESRGMNFFNVPKT-----PLSKSNPFPDPKLHDFLFPRRLPGNP 347
Query: 315 TGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC---GDVTLRFCIANGFR 371
G + +L H ++ ++P E R ++ A ++ G+ R GFR
Sbjct: 348 PREAGTSGGLLWHILKSRA-AQTPGAEIVHTRGRNVDVAEYSIVVNGEPVFRAARYYGFR 406
Query: 372 NIQNLIQKL---KRKRLP-------------------YDFIEIMACPSGCLNGGAQIR 407
NIQNL+++L K R+P Y ++E+MACP GC NGG QI+
Sbjct: 407 NIQNLVRRLKPAKPSRMPGGKPFGSARKPAGKAGSLEYSYVEVMACPGGCTNGGGQIK 464
>gi|259511482|sp|A6RR15.2|NAR1_BOTFB RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
Length = 572
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 230/479 (48%), Gaps = 94/479 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P KPS +I D + L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPAAKPSADNE-LEISFNTDAPLPSD-------L 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNA---HKASSN--------- 110
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + HK+++
Sbjct: 53 PPAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLSQLDSAPGIRLHKSATGTGVSVEGLE 112
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSH-------EQVVAKLCGFFKRL----GVDLVLDVG 159
+ K V S++ Q S+ A F ++ E +++ G R V+D
Sbjct: 113 QGGKIYVASVSPQSRASIAATFGVTEREAGYMIEHLLSGPKGIKNRAVYRNAFQWVVDTN 172
Query: 160 IAHCFSLVELENEFLDRFLSGG----GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
I LV L E + ++G P+ TS CPGWVCYAEK+H +LP++SR+KSPQ
Sbjct: 173 ITREACLV-LGAEEVIASMNGTEETKKPILTSSCPGWVCYAEKTH-PHVLPHLSRMKSPQ 230
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE------ELGYRDVDC 269
+MG+LIKT L+ KLG+ P I+HV +MPC+DKKLEASR + + G RDVD
Sbjct: 231 ALMGTLIKTTLSRKLGISPERIWHVAVMPCFDKKLEASREELTDAVWEGTGTRGVRDVDS 290
Query: 270 VITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVN---------------- 313
VIT+ EL ++LA+ + + K P H P +N
Sbjct: 291 VITSKEL-LMLAD---SRRIDFSKLPRTPLPSSSHIPFPDPTLNSFLFPSNRRSSSNGSR 346
Query: 314 -GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVTLRFCIANGF 370
SGG H L H G S V+ RN D+ + T GD+ L+ GF
Sbjct: 347 DAGSSGGNLHYAL-HYFASQHKGSS--VQTIKGRNADVVDYTVVADNGDILLKAARYYGF 403
Query: 371 RNIQNLIQKLK---RKRLP-------------------YDFIEIMACPSGCLNGGAQIR 407
RNIQNL+++LK R+P Y ++E+MACP GC NGG QI+
Sbjct: 404 RNIQNLVRRLKPARPSRMPGGKPIGSARRPNGKATGPDYTYVEVMACPGGCTNGGGQIK 462
>gi|443923185|gb|ELU42459.1| nuclear prelamin A recognition factor-like protein [Rhizoctonia
solani AG-1 IA]
Length = 549
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 225/463 (48%), Gaps = 107/463 (23%)
Query: 12 LTDLDDFIGPSQECIKPIPIEKPSGPRTGA---KIRIQDDGAYIQETNGREEKLKKVEIS 68
LTDL+DFI PSQ CIKP+ KP A +I I G Y +E++ ++ KK+
Sbjct: 11 LTDLNDFITPSQACIKPVEEVKPQQQIENAASTQIGIDSAGVYYEESH-QDSGRKKL--- 66
Query: 69 LTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
QQSHEEV+KV+ N + + + K+ VLS+A Q + SL
Sbjct: 67 --------------------QQSHEEVLKVVESN---PSPLHPDHKSFVLSIAPQCLASL 103
Query: 129 GAKFALSH--EQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--- 182
A + S +Q++ ++ F LG V D A +L+E EF +R S
Sbjct: 104 AASISPSATTQQILRRVEVFASSILGFSHVYDTTFARHIALLEHTREFFERRDSSTSSNL 163
Query: 183 ----------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGS--LIKTHLAEKL 230
P+ S CPGWVCY EK+H E I P++SR KSPQQVM S I+T +
Sbjct: 164 SDNKPGDTRLPMIASACPGWVCYVEKAHPEMI-PFLSRTKSPQQVMVSCAFIRTADLIQG 222
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE------- 283
+ IYHVT+MPCYDKKLEASR DFYN+ L RDVDCV+T ELE+L+ ++
Sbjct: 223 AFRANSIYHVTVMPCYDKKLEASRQDFYNDILSTRDVDCVLTTTELEILMRDKGWDISAP 282
Query: 284 ---LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVV 340
T + ++GIL P +P G+ SG Y +++ +SP V
Sbjct: 283 VPGEDETRMPNVENGIL--PELAQHP-------GSSSGSYLQSLIDSV---SLSAKSPSV 330
Query: 341 EFKPLRNPDIREATFT---CGDVTLRFCIANGFRNIQNLIQKLKR--------------- 382
K +R D E T T G V R GFRN+QN+++K+ R
Sbjct: 331 STKAIRTTDYEEYTVTDEVDGRVLFRGAKCYGFRNLQNIVRKVGRDTGVSVGRGAAGRVA 390
Query: 383 ---KRL---------------PYDFIEIMACPSGCLNGGAQIR 407
+R+ YD++E+MACP+GC+NGG Q+R
Sbjct: 391 TRGRRVVGATARKGSQAEEPRSYDYVEVMACPAGCVNGGGQLR 433
>gi|58271472|ref|XP_572892.1| iron hydrogenase [Cryptococcus neoformans var. neoformans JEC21]
gi|338818341|sp|P0CP10.1|NAR1_CRYNJ RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|57229151|gb|AAW45585.1| iron hydrogenase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 650
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 215/412 (52%), Gaps = 37/412 (8%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-PIEKPSGPRTGAKIRIQDDGAYIQ----------- 53
FSG L +TDLDDF+ PSQ CI P+ +KP+ +I I + Y +
Sbjct: 3 FSGALTITDLDDFLTPSQACIIPVRNNKKPAEDEGPTEIHIDSNNNYYEVSTYPSVGHDD 62
Query: 54 ETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNA--HKASSNE 111
+ ++ L+K EI+L DCLACSGCITS ES+LIT QS E+++ I+ N S
Sbjct: 63 DIGNSKKALEKAEINLNDCLACSGCITSTESLLITMQSQNEILEFIKTNPTVVDPESPCH 122
Query: 112 NTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRL---------GVDLVLDVGIAH 162
+ +LS++ Q + SL A +A + + L +R+ G V D A
Sbjct: 123 KPRLPILSISPQTLASLSAAYATASSRPPIPLLVLLRRIRAFLSQPEKGSWRVWDTTFAR 182
Query: 163 CFSLVELENEFLDR------FLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
SL E EF +R + P+ S CPGWVCYAEK+ G+ +LP +S +S Q
Sbjct: 183 HMSLRESVVEFHERKDKKEKGKAAEMPMLASACPGWVCYAEKAQGD-MLPLLSAARSSQG 241
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL 276
++G+L K+ KL P IYHVT MPCYDKKLEASR+DFY+ RDVDCV+T EL
Sbjct: 242 IIGALAKSWYGHKLQHKPDEIYHVTAMPCYDKKLEASRSDFYSSLYSTRDVDCVLTTGEL 301
Query: 277 EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPG 335
++LL + + + E +P LL + G+ SG Y ++ H +++ P
Sbjct: 302 DLLLQELGFDPHVPIANESTPSYSATEDSPFPELLTHEGSSSGSYLQTII-HDVQRSHPN 360
Query: 336 ESPVVEFKPLRNPD----IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRK 383
+ ++ + + D + + T T G + + GFRN+QNL++K+ ++
Sbjct: 361 PTRIITREIRGSTDNIEYLIQDTIT-GQIVFKGAKVYGFRNLQNLVRKVAKE 411
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 388 DFIEIMACPSGCLNGGAQIRNEKVASPKETALELE 422
DF+E+MACP GC+NGG Q++ A+E++
Sbjct: 473 DFVEVMACPGGCVNGGGQMKPTVPTPSAPEAMEVD 507
>gi|302923118|ref|XP_003053608.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734549|gb|EEU47895.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 577
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 231/478 (48%), Gaps = 88/478 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKPI P P ++ I D N
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPAAPPPQSQSLETEVILDGQQPAANPNA----- 55
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVM---------KVIRENNAH---KASSN 110
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ +V+ +++ + N
Sbjct: 56 -PAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLTTLDAAPALRVVTDDSGRFRVEGLEN 114
Query: 111 ENTKTIVLSLAIQPVLSLGAK--FALSHEQVVAKLCGFFK-----------RLGVDLVLD 157
EN K V S++ Q +L A ++S + V L + + G V+D
Sbjct: 115 ENAKLFVASVSPQTRANLAAACGGSVSEKDVGHMLSNLLRGPDGIANGGQWKNGFTWVVD 174
Query: 158 VGIAHCFSLVELENEFLDRFLSG----GGPLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
+A +LV E L+ +G P+ S CPGWVCYAEK+H +LP++S+VKS
Sbjct: 175 TNVAREATLVLGAEEVLNSTGAGVAAPAKPILASSCPGWVCYAEKTH-PHVLPHLSKVKS 233
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL--------GYR 265
PQ +MG+++KT L+ L + PS I+H+ +MPC+DKKLEASR + E G R
Sbjct: 234 PQALMGTILKTTLSRTLDIAPSRIWHLAVMPCFDKKLEASREELTEEVWAGGESRGRGVR 293
Query: 266 DVDCVITAVELEVLLANELATTTLQEEKDGILD---WPWDEHNPHRMLLVN--------- 313
DVDCVIT+ E+ ++LA K P+ + H L
Sbjct: 294 DVDCVITSKEI-LMLAESRGLNFFDIPKTAPPSPTLTPFPDPKIHDFLFPRRRSRNSPRE 352
Query: 314 -GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFR 371
GT SGG H++L Q PG + +V + RN D+ E + G+ R GFR
Sbjct: 353 AGT-SGGLLHHILQSRAAQ-TPG-AEIVHARG-RNVDVAEYSVVVNGEPVFRAARYYGFR 408
Query: 372 NIQNLIQKLKRKR----------------------LPYDFIEIMACPSGCLNGGAQIR 407
NIQNL+++LK R L + ++E+MACP GC NGG QI+
Sbjct: 409 NIQNLVRRLKPARPSRMPGGKPFGSARKPAGKAASLEHSYVEVMACPGGCTNGGGQIK 466
>gi|302659012|ref|XP_003021201.1| hypothetical protein TRV_04632 [Trichophyton verrucosum HKI 0517]
gi|291185089|gb|EFE40583.1| hypothetical protein TRV_04632 [Trichophyton verrucosum HKI 0517]
Length = 597
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 255/547 (46%), Gaps = 115/547 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ T K + ++ E E+
Sbjct: 1 MSAILSADDLNDFISPGVACIKPV--------ETLPKKQEENPYEVTTEDKLEEQNPPPA 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKV------IRENNAHKASSNENTKTIVLS 119
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ IR + + + + K V S
Sbjct: 53 QISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDANPEIRLDGGGRIEAGDG-KIFVAS 111
Query: 120 LAIQPVLSLGAKFALSH-------EQVVAKLCGFFKR----LGVDLVLDVGIAHC----F 164
++ Q SL A + +S EQ ++ G G V+D I
Sbjct: 112 VSPQVRASLAATYGISETNAGYMIEQFLSGPNGLRAGGQHGSGFSWVVDTNIMRQAVLEL 171
Query: 165 SLVELENEF-----------LDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
S E+ D+F P+ S CPGW+CYAEK+H +LP++SR+KS
Sbjct: 172 STAEVTESLNDAAPTTSHDESDKFSLPNRPILASSCPGWICYAEKTH-PHVLPHLSRLKS 230
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN-----EELG----- 263
PQ + G+ +KT +++KL + PS ++H+ +MPC+DKKLEASR + + E L
Sbjct: 231 PQALTGTFLKTIISKKLNISPSQVWHLAIMPCFDKKLEASRQELTDVSWRGEALDTASSP 290
Query: 264 YRDVDCVITAVELEVLLA--NELATTTLQEEKDGILDWPWDEHNPHRMLLVNGT------ 315
RDVDCVIT+ EL +L + N + E L P+ + + L N T
Sbjct: 291 VRDVDCVITSKELLMLASSRNISLPSLPLEPLPTHLSTPFPDQTIAKFLSTNNTLHSTQP 350
Query: 316 ----GSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--TCGDVTLRFCIANG 369
SGGY H++L+ Q +S +++ + RN D+ E T G+ ++ G
Sbjct: 351 AAAGPSGGYLHHLLT--TYQSKHADS-IIQSQRGRNADVVEYTLVSATGEPIIKAARYYG 407
Query: 370 FRNIQNLIQKLK---RKRLP-----------------------------YDFIEIMACPS 397
FRNIQNL++KLK RLP + ++E+MACP
Sbjct: 408 FRNIQNLVRKLKPARASRLPGSRVNGSGTRARPAPVSNGKPGAPIPPTEFAYVEVMACPG 467
Query: 398 GCLNGGAQIR-------NEKVASPKETALELETILCDLAKSEPREN-ATLEHLYKAWLGG 449
GC NGG QIR N +A P+ +ALE +K P + A L + +A+
Sbjct: 468 GCTNGGGQIRLEDARQANSSLALPEGSALE------PTSKPTPHDQRAWLARVDEAYYSD 521
Query: 450 KSTDKGK 456
S D G+
Sbjct: 522 SSEDGGQ 528
>gi|367052883|ref|XP_003656820.1| hypothetical protein THITE_2121990 [Thielavia terrestris NRRL 8126]
gi|347004085|gb|AEO70484.1| hypothetical protein THITE_2121990 [Thielavia terrestris NRRL 8126]
Length = 587
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 221/478 (46%), Gaps = 84/478 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKPI P PS + + DG Q+
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPTAPPSSEPQSLEHEVILDGQQPQQAQAGGGPA 60
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI------------RENNAHKASSN 110
K ISLTDCLACSGC+TSAE+VL++ QSH EV+ V+ + A+ S
Sbjct: 61 K---ISLTDCLACSGCVTSAEAVLVSLQSHNEVLSVLDAAPALRLTQDRHRDGAYSVSGL 117
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRL----------------GVDL 154
E+ + ++ P G A + + L G
Sbjct: 118 EDPAAKLFVASVSPQTRAGLAAACGGGVTAQQAGRMIEALLLQGEAGLAAGGKHGNGFTW 177
Query: 155 VLDVGIAHCFSLVELENEFLDRFLSGG----GPLFTSECPGWVCYAEKSHGEFILPYISR 210
V+D A LV +E L +GG P+ TS CPGWVCYAEK+H ++LP++SR
Sbjct: 178 VVDTNAAREACLVLGSDEVLGEDGAGGDRPTAPVLTSSCPGWVCYAEKTH-PYVLPHLSR 236
Query: 211 VKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL-------- 262
VKSPQ +MG+L+KT L+ LG+ P I+H+ +MPC+DKKLEASR + +
Sbjct: 237 VKSPQALMGTLLKTTLSRVLGIAPDRIWHLAVMPCFDKKLEASREELTDAVWGGEGKHGK 296
Query: 263 GYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP-WDEHNPHRMLLV--------N 313
G RDVDCVIT E+ ++LA K P + + H+ L +
Sbjct: 297 GVRDVDCVITTKEI-LMLAESRGIDFFGLSKSASKQQPAFPDPVIHKFLFPPQPRTQRRD 355
Query: 314 GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT--CGDVTLRFCIANGFR 371
SGG H +L H ++ PG +E RN D+ + G+ + GFR
Sbjct: 356 AGTSGGNLHFIL-HDVQSRHPGSR--IEMTRGRNADVVDYAVVNPSGETVFKAARYYGFR 412
Query: 372 NIQNLIQKLKRKR----------------------LPYDFIEIMACPSGCLNGGAQIR 407
NIQNL++KLK R L Y ++E+MACP GC NGG QI+
Sbjct: 413 NIQNLVRKLKPARPSRMPGGRPVGGARRPGGKSAGLEYAYVEVMACPGGCTNGGGQIK 470
>gi|389633019|ref|XP_003714162.1| cytosolic Fe-S cluster assembly factor nar-1 [Magnaporthe oryzae
70-15]
gi|351646495|gb|EHA54355.1| cytosolic Fe-S cluster assembly factor nar-1 [Magnaporthe oryzae
70-15]
gi|440473671|gb|ELQ42453.1| hypothetical protein OOU_Y34scaffold00207g18 [Magnaporthe oryzae
Y34]
gi|440486283|gb|ELQ66164.1| hypothetical protein OOW_P131scaffold00420g3 [Magnaporthe oryzae
P131]
Length = 598
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 234/490 (47%), Gaps = 102/490 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L + DL+DFI P CIKP+ P P+ P ++ + DG Q+
Sbjct: 1 MSAILSVDDLNDFISPGVACIKPVETLPAAAPTDPSLEHEVIL--DG---QQNGSSSAAA 55
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT--------- 113
+ISLTDCLACSGC+TSAE+VL++ QSH E++ V+ A + +E+T
Sbjct: 56 GPAQISLTDCLACSGCVTSAEAVLVSLQSHSELLSVLDSAPALQVVRDESTGQFSVEGLE 115
Query: 114 ----KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCG-FFKRL---------------GVD 153
+ V S++ Q SL A S V + G RL
Sbjct: 116 DPARRLFVASVSPQTRASLAAA---SGPGVTERQAGRMLDRLLMGPEGLSAGGKWGNKFA 172
Query: 154 LVLDVGIAHCFSLVELENEFLDRFLSGG--GPLFTSECPGWVCYAEKSHGEFILPYISRV 211
V+D A LV +E LD S P+ TS CPGWVCYAEK+H ++LP++SRV
Sbjct: 173 WVVDTNAAREACLVLGSDEVLDAASSTTPKKPILTSSCPGWVCYAEKTH-PYVLPHLSRV 231
Query: 212 KSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFY--------NEELG 263
KSPQ ++G+L+KT L+ LGV I+H+ LMPC+DKKLEASR + N G
Sbjct: 232 KSPQALVGTLLKTTLSRTLGVPADRIWHLALMPCFDKKLEASREELTDSVWAGDGNPGRG 291
Query: 264 YRDVDCVITAVELEVL-------LANELATTTLQEEK------DGILDWPWDEHNPHRML 310
RDVDCVIT+ E+ +L N + L++E+ L P H P R
Sbjct: 292 TRDVDCVITSKEVFMLTESRGIDFFNLPMSPALKQEQFPDNKIHHFLFPPRQRHRPSR-- 349
Query: 311 LVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCG---DVTLRFCIA 367
GT SGG H +L + + PG +E RN D+ E G +V +
Sbjct: 350 -AAGT-SGGNLHFILQDVLAR-NPGSR--LETTRGRNIDVVEYAVHAGGSNEVLFKAGRY 404
Query: 368 NGFRNIQNLIQKLK---------------RKRLPYD-------------FIEIMACPSGC 399
GFRNIQNL++KLK +R+P ++E+MACP GC
Sbjct: 405 YGFRNIQNLVRKLKPAKPSRMPGGKPFGSARRVPTGRAGAAGAATVENTYVEVMACPGGC 464
Query: 400 LNGGAQIRNE 409
NGG Q++ +
Sbjct: 465 TNGGGQVKAD 474
>gi|406860086|gb|EKD13146.1| iron only hydrogenase large subunit domain-containing protein
[Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 570
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 170/496 (34%), Positives = 235/496 (47%), Gaps = 97/496 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L + L+DFI P CIKP E I D N L
Sbjct: 1 MSAILSIDTLNDFISPGVACIKPNEYE----------ISFNTDAPPPSSNN---NNLPPA 47
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN------ENT----KT 115
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + A + S+ EN +
Sbjct: 48 QISLTDCLACSGCVTSAEAVLVSLQSHTEVLSELDSAPALRLISSPTGLVIENPEDPGRI 107
Query: 116 IVLSLAIQPVLSLGAKFALSH-------EQVVAKLCGFFKRL----GVDLVLDVGIAHCF 164
V S++ Q S+ A F ++ EQ+++ G R V+D +A
Sbjct: 108 YVASVSPQTRASIAATFKVTEREAGYMIEQLLSGPRGVKGRAVYRNAFQWVVDTNVARDA 167
Query: 165 SLVELENEFLDRFLSGGG----------------PLFTSECPGWVCYAEKSHGEFILPYI 208
LV +E + L+G G P+ +S CPGWVCYAEK+H ILP++
Sbjct: 168 CLVLGADEVMHSLLAGKGTTNGLGQGDAQNQPQKPILSSSCPGWVCYAEKTH-PHILPHL 226
Query: 209 SRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE------EL 262
SR+KSPQ +MG+L+KT L++KLG+ P I+HV +MPC+DKKLEASR + +
Sbjct: 227 SRLKSPQALMGTLLKTTLSKKLGISPDRIWHVAIMPCFDKKLEASREELTDAVWEGTGTR 286
Query: 263 GYRDVDCVITAVELEVLLAN------ELATTTLQEE---KDGILDWPWDEHNPHRMLLVN 313
G RDVD VIT+ EL +L + +L L D LD R V
Sbjct: 287 GVRDVDSVITSKELLMLAESRRVDFAKLPRAPLPSRIPFPDLKLDAFLFPPVRRRKNNVP 346
Query: 314 GTG-SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT--CGDVTLRFCIANGF 370
G SGG + VL + Q E ++ RN D+ E + T G+ + GF
Sbjct: 347 AAGTSGGNLYYVLQYFASQ---HEGATIQTTRGRNADVLEYSVTSSAGETLFKAARYYGF 403
Query: 371 RNIQNLIQKLK---RKRLP-------------------YDFIEIMACPSGCLNGGAQIRN 408
RNIQNL++KLK R+P + ++E+MACP GC NGG QI
Sbjct: 404 RNIQNLVRKLKPARPSRMPGGKPIGSARKPVGKASGPEFSYVEVMACPGGCTNGGGQI-- 461
Query: 409 EKVASPKETALELETI 424
KV P + +E+ I
Sbjct: 462 -KVDDPIISGVEISEI 476
>gi|261191831|ref|XP_002622323.1| iron-sulfur cluster assembly associated protein Nar1 [Ajellomyces
dermatitidis SLH14081]
gi|239589639|gb|EEQ72282.1| iron-sulfur cluster assembly associated protein Nar1 [Ajellomyces
dermatitidis SLH14081]
Length = 621
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 236/506 (46%), Gaps = 112/506 (22%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGR--EEKLK 63
S +L DL+DFI P CIKPI + P K + AY T + E
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIE----TLPHKEVK---NSENAYEVTTEDKIEPENPP 53
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKV--------IRENNAH---------- 105
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ I E N H
Sbjct: 54 PAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDSCPELRIDERNGHGVAQTLRDDA 113
Query: 106 -------KASSNENTKTIVLSLAIQPVLSLGAKFALSHEQ---VVAKLCGFFKRL----- 150
++ + + K + S++ Q SL A + +S + ++ + G + L
Sbjct: 114 GFSAAGQQSIAEGDKKIFIASVSPQVRASLAATYGISERKAGWLIEQFLGGPQGLRAGGA 173
Query: 151 ---GVDLVLDVGIAHCFSLVELENEFLDRFLSGGGP-----------LFTSECPGWVCYA 196
G V+D + L NE ++ G P + +S CPGW+CYA
Sbjct: 174 HGNGFAWVVDTNVMRQVFLELSVNEVMESLEDSGSPSLEGFPIPKRPVLSSACPGWICYA 233
Query: 197 EKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD 256
EK+H +LP+ISR+KSPQ + G+L+KT L++ L + P+ I+H+ +MPC+DKKLEASR +
Sbjct: 234 EKTH-PHVLPHISRLKSPQALTGTLLKTVLSKALNISPAQIWHLAIMPCFDKKLEASRQE 292
Query: 257 FYNEELG---------YRDVDCVITAVELEVLLANE------LATTTLQEEKDGILDWPW 301
+ RDVDCVIT+ E+ +L + L L + P+
Sbjct: 293 LTDASWQSSSSTTHSPVRDVDCVITSREVLMLATSRNISLQNLPLQPLPSSYTPLFPDPY 352
Query: 302 ------DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
+ P GT SGGY ++L+ A + PG ++ + RN D+ E +
Sbjct: 353 LASFLFPKSGPSTQPSTAGT-SGGYLFHILT-AYQHRNPGSQ--IQTQRGRNSDVIEYSL 408
Query: 356 T--CGDVTLRFCIANGFRNIQNLIQKLK---RKRLP------------------------ 386
T GD ++ GFRNIQNL++KLK RLP
Sbjct: 409 TSPSGDTIIKAARYYGFRNIQNLVRKLKPPRASRLPGAKPMIGRRAGSGRATAANNTSAT 468
Query: 387 -YDFIEIMACPSGCLNGGAQIRNEKV 411
Y ++E+MACP GC NGG QIR E V
Sbjct: 469 DYAYVEVMACPGGCTNGGGQIRVEDV 494
>gi|336267324|ref|XP_003348428.1| hypothetical protein SMAC_02924 [Sordaria macrospora k-hell]
gi|380092082|emb|CCC10350.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 581
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 227/476 (47%), Gaps = 81/476 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEK--LK 63
S +L + DL+DFI P CIKPI + P + ++ I + E K
Sbjct: 1 MSAILSVDDLNDFINPGVACIKPIETLPTAAPAV-SNANPSNEFEVILDGQQPEAKGNAP 59
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAH-------------KASSN 110
EISLTDCLACSGC+TSAE++L++ QSH EV+ V+ A K N
Sbjct: 60 PAEISLTDCLACSGCVTSAEAMLVSLQSHNEVLNVLDSAPALQLVGPDADGKYSVKGLEN 119
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCG--FFKRLGV----------DLVLD 157
+ K V S++ Q SL A EQ ++ F G+ V+D
Sbjct: 120 DAAKLYVASVSPQSRASLAAACGNGVTEQQAGRMIEQLFLGEQGLARGGNWGNKFTWVVD 179
Query: 158 VGIAHCFSLVELENEFLDRFLS----GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
A +LV +E L ++ P+ T+ CPGWVCYAEK+H ++LP++SRVKS
Sbjct: 180 TNTAREATLVLGSDEVLGGSIAPSDKAATPILTASCPGWVCYAEKTH-PYVLPHLSRVKS 238
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL--------GYR 265
PQ +MG+L+KT L+ L + P I+H+ +MPC+DKKLEASR + + G R
Sbjct: 239 PQALMGTLLKTSLSRILNISPDRIWHLAVMPCFDKKLEASREELTDAVWAGDGKPGRGVR 298
Query: 266 DVDCVITAVELEVLLANE----------LATTTLQEEKDGILDWPWDEHNPHRMLLVNGT 315
DVDCVIT+ E+ +L A+ + Q I D+ + HR
Sbjct: 299 DVDCVITSKEILMLAASRGLNFFGLPASAPSQHPQFPDPSIHDFLFRPG--HRQQSREAG 356
Query: 316 GSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVTLRFCIANGFRNI 373
SGG H +L + + + ++ P RN D+ E G+V + GFRNI
Sbjct: 357 TSGGNMHFILRNLQAKNVGSQ---IQTVPGRNADVVEYKVIAESGEVLFKAARYYGFRNI 413
Query: 374 QNLIQKL---KRKRLP-------------------YDFIEIMACPSGCLNGGAQIR 407
QNL++KL K R+P Y ++E+MACP GC NGG QI+
Sbjct: 414 QNLVRKLKPAKASRMPGGKPFGSAKRPAGKANGLDYGYVEVMACPGGCTNGGGQIK 469
>gi|149246746|ref|XP_001527798.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|259511268|sp|A5DSI2.1|NAR1_LODEL RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|146447752|gb|EDK42140.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 594
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 162/500 (32%), Positives = 231/500 (46%), Gaps = 107/500 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIP----------IEKPSGPRTGAKIRIQDDG------ 49
S +L DL+DFI P CIKP+ ++ S ++ IQ D
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVTQPKSELNPQHVDSSSTISETGEVEIQIDSQGNPLE 60
Query: 50 -----AYIQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNA 104
I + + L +ISL DCLACSGCITSAE VL+ Q SH E++K + E++
Sbjct: 61 ISQIDTKINKADPSSTALTPAQISLADCLACSGCITSAEEVLVAQHSHHELLKAMEESSL 120
Query: 105 HKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHC 163
AS E K V S++ Q SL + +S E++ L F ++G V+ +
Sbjct: 121 --ASGTE--KVFVASISQQLRASLAMAYDMSIEEMDKLLINLFVNQMGFQYVVGTSLGRK 176
Query: 164 FSLVELENEFLDRFLSGG-------GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
SL+ + R G P+ +S CPGWV YAEK+H ++LPYIS VKS QQ
Sbjct: 177 LSLINESQGMIHRKEEGKTIGENLKNPVLSSICPGWVLYAEKTH-PYVLPYISTVKSAQQ 235
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYR---DVDCVITA 273
+ G L+K A + G+ S +YH+T+MPC+DKKLE++R + + G DVDCV+TA
Sbjct: 236 ITGCLLKNLTAYERGIGKSKVYHLTIMPCFDKKLESARPELFANHDGADNVPDVDCVLTA 295
Query: 274 VELEVLLANELA----------TTTLQEEKDGIL------DWPWDEHNPHRMLLVNGTGS 317
EL L+ L T L+++ + +WP+ +++ G+ S
Sbjct: 296 RELVTLIDESLGKYQLVPKVIPQTLLRKDIAEVYKSAAPTNWPFVQYSWSND---PGSSS 352
Query: 318 GGYAHNVLSHAIRQLCPGESPVVE---FKPL--RNPDIREATFT-CGDVTLRFCIANGFR 371
GGYA+ L QL ++ E K L +N D+ E G+ I NGFR
Sbjct: 353 GGYAYTYLRLFQEQLITTQNYRPEDFSMKVLQGKNTDVYEMRLLHNGNQVASSAIVNGFR 412
Query: 372 NIQNLIQKLK----------------------RKRLP----------------------- 386
NIQNL++KLK R R+
Sbjct: 413 NIQNLVRKLKPGNNNNKVGGLAIKVNPLVARRRARMSKSEDSSGASASSMAPAEIADPSK 472
Query: 387 YDFIEIMACPSGCLNGGAQI 406
D++EIMACP GC+NGG QI
Sbjct: 473 VDYVEIMACPQGCINGGGQI 492
>gi|321262240|ref|XP_003195839.1| iron hydrogenase [Cryptococcus gattii WM276]
gi|317462313|gb|ADV24052.1| iron hydrogenase, putative [Cryptococcus gattii WM276]
Length = 650
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 211/411 (51%), Gaps = 35/411 (8%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPI-EKPSGPRTGAKIRIQDDGAYIQETN-------- 56
FSG L +TDLDDF+ PSQ CI P+ +KP+ +I I + Y + +
Sbjct: 3 FSGALTITDLDDFLTPSQACIIPVRNNKKPTEDEGPTEIHIDSNNNYYEVSTYPSVGHDD 62
Query: 57 --GREEK-LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNA--HKASSNE 111
G +K L+K EI+L DCLACSGCITS ES+LIT QS EV++ I+ N S
Sbjct: 63 GIGNSKKALEKAEINLNDCLACSGCITSTESLLITMQSQNEVLQFIKTNPTALDPDSPCH 122
Query: 112 NTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRL---------GVDLVLDVGIAH 162
+ +LS++ Q + SL A +A + + L +R+ G V D A
Sbjct: 123 KPRLSILSISPQTLASLSAAYATASSRSPISLLVLLRRIRAFLSQPEKGAWRVWDTTFAR 182
Query: 163 CFSLVELENEFLDRFLSGGG------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
SL E EF +R S P+ S CPGWVCYAEK+ G+ +LP +S +S Q
Sbjct: 183 HMSLRESMVEFHERKESKEKGKAVEMPMLASACPGWVCYAEKAQGD-MLPLLSAARSSQG 241
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL 276
++G+L K+ +L P IYHVT MPCYDKKLEASR+DFY+ RDVDCV+T EL
Sbjct: 242 IVGALAKSWYGHQLQYKPDEIYHVTAMPCYDKKLEASRSDFYSSLYSTRDVDCVLTTGEL 301
Query: 277 EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPG 335
++LL + + E +P LL + G+ SG Y ++ + +++ P
Sbjct: 302 DLLLKELGFDPYVPVANESTPSCSATEDSPFPELLTHEGSSSGSYLQTII-YDVQRSHPN 360
Query: 336 ESPVVEFKPLRNPDIREATF---TCGDVTLRFCIANGFRNIQNLIQKLKRK 383
+ + + + D E G V + GFRN+QNL++K+ ++
Sbjct: 361 PTRITTREIRGSTDNVEYLIQDTVTGQVIFKGAKVYGFRNLQNLVRKVAKE 411
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 388 DFIEIMACPSGCLNGGAQIR 407
DF+E+MACP GC+NGG Q++
Sbjct: 473 DFVEVMACPGGCVNGGGQMK 492
>gi|378729425|gb|EHY55884.1| ferredoxin hydrogenase [Exophiala dermatitidis NIH/UT8656]
Length = 641
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/492 (33%), Positives = 235/492 (47%), Gaps = 103/492 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ ++ +D A +
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPKQEDYNPYEVTTEDKVA--------AQNPAPA 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE---------------------NNA 104
ISLTDCLACSGC+TSAE+VL++ QSH EV+ + N+A
Sbjct: 53 SISLTDCLACSGCVTSAEAVLVSLQSHTEVLNTLDSYESLNIQNLLQQQSKNGLGHINHA 112
Query: 105 HKASS-NENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFF--KRLGVDLVLDVGIA 161
H ++ +N K V S++ Q SL A + +S + GF + L L +G A
Sbjct: 113 HTSTPIPQNAKLFVASVSPQVRASLAATYGISERK-----AGFMIEQFLSGAQGLRIGGA 167
Query: 162 H--CFSLVELENEFLDRFLSGGG------------PLFTSECPGWVCYAEKSHGEFILPY 207
H F+ V N+ + L G P+ TS CPGW+CYAEK+H +LP+
Sbjct: 168 HNSSFTYVVDTNQLREACLVLGAEEVSESLSNKKRPVLTSACPGWICYAEKTH-PHVLPH 226
Query: 208 ISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE------- 260
+S +KSPQ + G+L+K+ L++ LG+HPS I+H+ +MPC+DKKLEASR + +
Sbjct: 227 LSSLKSPQALSGTLLKSVLSKTLGIHPSQIWHLAIMPCFDKKLEASREELTDRWWRPESQ 286
Query: 261 ------ELGYRDVDCVITAVELEVLLA------NELATTTLQEE--KDGILD---WPWDE 303
RDVDCVIT+ EL L + L T L++ D + +P
Sbjct: 287 QQGQTTTQPVRDVDCVITSRELLSLAEARNIQLSSLPLTPLEQPPFPDARISNFLFPSPR 346
Query: 304 HNPHRM-LLVNGTGSGGYAHNVLSHAIRQLC-PGESPVVEFKPLRNPDIREATFTCGDVT 361
R N SGGY ++++ A Q PG + + + RN D+ E D T
Sbjct: 347 RRQQRAEQSPNAGSSGGYLYHIM--ATEQANHPGST--ISIQRGRNADVVEYFLFSADGT 402
Query: 362 ---LRFCIANGFRNIQNLIQKL---KRKRLP---------------YDFIEIMACPSGCL 400
++ GFRNIQNL++KL K+ RLP Y ++E+MACP GC
Sbjct: 403 QTLMKCARYYGFRNIQNLVRKLKPAKQSRLPGAARRATAATGGAADYAYVEVMACPGGCT 462
Query: 401 NGGAQIRNEKVA 412
NGG QI+ + VA
Sbjct: 463 NGGGQIKVDDVA 474
>gi|385306039|gb|EIF49976.1| nuclear architecture related protein [Dekkera bruxellensis
AWRI1499]
Length = 487
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 158/472 (33%), Positives = 230/472 (48%), Gaps = 87/472 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI--PIEKPSGPRTGAKIRIQDD--GAYIQ-ETNGREE 60
S +L DL+DFI PS CIKP+ E G + G K+ I+ D G ++ G
Sbjct: 1 MSALLSADDLNDFITPSVACIKPVKGSNEGNEGEK-GQKLEIEIDTEGXPVEVNKEGETR 59
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
+L++ +ISL+DCLACSGCITS+E VL+ Q SH+E MK + + K V S+
Sbjct: 60 RLQRAQISLSDCLACSGCITSSEEVLMQQHSHKEFMKAMEKYKGQK--------IFVASI 111
Query: 121 AIQPVLSLGAKFALSH---EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF 177
+ Q SL LS ++V+ KL F +RLG V+ G+ SL ++ + +D
Sbjct: 112 SHQARASLSNALHLSVADVDRVLIKL--FVERLGFAKVVGTGLGRRISLKQMCQQVIDAS 169
Query: 178 LSGGG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
G P+ TS CPGW+ Y EK+H F+LPY+ KSPQQ+ G L+K A +L +
Sbjct: 170 QKGDKDHKKPILTSICPGWLMYVEKTH-PFLLPYLDNTKSPQQITGLLLKRTTAAELHIK 228
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA------NELATT 287
P +Y +++MPC+DKKLEA+R + +E++ DVD VIT E+ LL ++L
Sbjct: 229 PKEVYGLSVMPCFDKKLEAARQE-XDEQV---DVDTVITPKEVLHLLEDLKIDLDQLIAE 284
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLV-------NGTGSGGYAHNVLSHAI-RQLCPGESPV 339
+ L ++ PH L G+ SGGYA++ L+ + RQ +
Sbjct: 285 ACADSSYADLGALYERFAPHNWLYPVESWTNDEGSASGGYAYHYLATXMHRQAAXADCFE 344
Query: 340 VEFKPLRNPDIREATFT---CGDVTLRFCIANGFRNIQNLIQKLKRKR------------ 384
+ RNPDI E V R + NGFRNIQN+++K+K+
Sbjct: 345 IRKLEGRNPDIYELQLVNKXSEQVXARSAVVNGFRNIQNMVRKIKQSSQKGPXTSGRGRA 404
Query: 385 ------------------------------LPYDFIEIMACPSGCLNGGAQI 406
L + IE+MACP+GC+NGG I
Sbjct: 405 XLRRRRMQKGHTDPEHXSRDHEHAGQRVNLLECELIEVMACPNGCINGGGLI 456
>gi|326475687|gb|EGD99696.1| iron-sulfur cluster assembly associated protein Nar1 [Trichophyton
tonsurans CBS 112818]
Length = 597
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 255/547 (46%), Gaps = 115/547 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ T K + ++ E E+
Sbjct: 1 MSAILSADDLNDFISPGVACIKPV--------ETLPKKQEENPYEVTTEDKLEEQNPPPA 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIREN-----NAHKASSNENTKTIVLSL 120
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + N + + + K V S+
Sbjct: 53 QISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDANPEIQLDGEGGAEARDGKIFVASV 112
Query: 121 AIQPVLSLGAKFALSH-------EQVVAKLCGFFK----RLGVDLVLDVGIAHCFSLVEL 169
+ Q SL + + +S EQ ++ G G V+D I +++EL
Sbjct: 113 SPQVRASLASTYGISERNAGYMIEQFLSGPNGLRAGGQHGSGFTWVVDTNIMRQ-AVLEL 171
Query: 170 ENEFLDRFLSGGGPL----------------FTSECPGWVCYAEKSHGEFILPYISRVKS 213
+ L+ PL S CPGW+CYAEK+H +LP++SR+KS
Sbjct: 172 STAEVAESLNAAAPLTPHDESGKFSIPNRPILASSCPGWICYAEKTH-PHVLPHLSRLKS 230
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN-----EELG----- 263
PQ + G+ +KT +++KL + PS I+H+ +MPC+DKKLEASR + + E L
Sbjct: 231 PQALTGTFLKTIISKKLNISPSQIWHLAVMPCFDKKLEASRQELTDVSWRGEALDKASSP 290
Query: 264 YRDVDCVITAVELEVLLA--NELATTTLQEEKDGILDWPWDEHNPHRMLLVNGT------ 315
RDVDCVIT+ EL +L + N + E L P+ + + L + T
Sbjct: 291 VRDVDCVITSKELLMLASSRNISLPSLPLEPLPTHLQTPFPDQTIAQFLSTSNTLHFTQP 350
Query: 316 ----GSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--TCGDVTLRFCIANG 369
SGGY H++L+ Q +S +++ + RN D+ E T G+ ++ G
Sbjct: 351 AAAGPSGGYLHHLLT--TYQSKHADS-IIQSQRGRNADVVEYTLVSAAGEPIIKAARYYG 407
Query: 370 FRNIQNLIQKLK---RKRLP-----------------------------YDFIEIMACPS 397
FRNIQNL++KLK RLP + ++E+MACP
Sbjct: 408 FRNIQNLVRKLKPARASRLPGSRANGPGARARPAPVSNGKPGAPIPPAEFAYVEVMACPG 467
Query: 398 GCLNGGAQIR-------NEKVASPKETALELETILCDLAKSEPREN-ATLEHLYKAWLGG 449
GC NGG QIR N +A P+ +A E + K P + A L + +A+
Sbjct: 468 GCTNGGGQIRLEDARQANSSLALPEGSASEQSS------KPTPHDQRAWLARVDEAYYSD 521
Query: 450 KSTDKGK 456
S D G+
Sbjct: 522 SSEDGGQ 528
>gi|212542391|ref|XP_002151350.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Talaromyces marneffei ATCC 18224]
gi|259511271|sp|B6QQH9.1|NAR1_PENMQ RecName: Full=Cytosolic Fe-S cluster assembly factor nar1; AltName:
Full=Nuclear architecture-related protein 1
gi|210066257|gb|EEA20350.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Talaromyces marneffei ATCC 18224]
Length = 590
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 229/483 (47%), Gaps = 96/483 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P + + ++ +D IQ N
Sbjct: 1 MSAILSADDLNDFISPGLACIKPVENFPQKNTASEENAYEVTTEDK---IQPENQ----- 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASS------------- 109
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + +AH+ +
Sbjct: 53 APTQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTL---DAHRPAPLIITQDGNLSVSR 109
Query: 110 --NENTKTIVLSLAIQPVLSLGAKFALSHEQ---VVAKLCGFFKRL--------GVDLVL 156
+ + V S++ Q SL A + +S + ++ +L + L G VL
Sbjct: 110 KIEPDERIFVASVSPQVRASLAATYDISERKAGHMIDQLLRGPQGLRNGGKHGNGFTWVL 169
Query: 157 DVGIAHCFSLVELENEFLD------------RFLSGGGPLFTSECPGWVCYAEKSHGEFI 204
D + L E + ++ S P+ +S CPGW+CYAEK+H +
Sbjct: 170 DTNVLRQMVLTLAAQEVTEALHTSSASSGSGKYTSPKKPILSSACPGWICYAEKTH-PHV 228
Query: 205 LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN----- 259
LP++SR+KSPQ + G+ +K+ L+ LG+ PS I+H+ +MPC+DKKLEASR + +
Sbjct: 229 LPHLSRLKSPQALSGTFVKSILSRTLGIAPSQIWHLAVMPCFDKKLEASREELTDAAWSN 288
Query: 260 -EELGYRDVDCVITAVELEVLLANE-----------LATTTLQEEKDGILDWPWDEHNPH 307
+ RDVDCVIT+ EL +L ++ LA T D +D H
Sbjct: 289 ISDSPVRDVDCVITSRELLMLASSRNISLPSLPLKSLAPTYAPHFPDPTVDSFLFSHTQT 348
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT--CGDVTLRFC 365
SGGY + +L ++ PG +E + RN D+ E + + ++
Sbjct: 349 SKQSSKYGTSGGYLYYIL-LLHKEKHPGSR--IEVQRGRNSDVIEYSLMSETNEAIMKAA 405
Query: 366 IANGFRNIQNLIQKLKRKR---------------------LPYDFIEIMACPSGCLNGGA 404
GFRNIQNL++K+K R L Y F+E+MACP GC NGG
Sbjct: 406 RYYGFRNIQNLVRKMKPARASRLPGANRRGAAGSGASSSGLDYAFVEVMACPGGCTNGGG 465
Query: 405 QIR 407
QIR
Sbjct: 466 QIR 468
>gi|295669482|ref|XP_002795289.1| iron-sulfur cluster assembly associated protein Nar1
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285223|gb|EEH40789.1| iron-sulfur cluster assembly associated protein Nar1
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 627
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 258/545 (47%), Gaps = 114/545 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE--KLK 63
S +L DL+DFI P CIKP+ + P +K + + AY T + + K
Sbjct: 1 MSAILSSDDLNDFISPGVACIKPVE----TLPEEDSK---KQENAYEVTTEDKIQAGKPP 53
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE------NNAHKASSN------- 110
+ISLTDCLACSGC+TSAE+VL++ QSH EV+K + +N K S
Sbjct: 54 AAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLKTLDSCPEFQIHNQKKCGSESSRPDVP 113
Query: 111 ----------ENTKTIVLSLAIQPVLSLGAKFALSH-------EQVV----------AKL 143
+ K + S++ Q SL A F +S EQ + A
Sbjct: 114 CSAEGQKCSADGRKIFIASVSPQVRASLAATFGISERKAGYLIEQFLSGPQGLRAGGAHG 173
Query: 144 CGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG------GGPLFTSECPGWVCYAE 197
GF + +++ +V + + V+ E +SG P+ +S CPGW+CYAE
Sbjct: 174 SGFTWVVDTNVMRNVCLELSVTEVKESLEIPGNTISGEEFPVPKRPILSSICPGWICYAE 233
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
K+H +LP++SR+KSPQ + G+L+K+ L + L + P HI+H+ +MPC+DKKLEASR +
Sbjct: 234 KTH-PHVLPHMSRIKSPQALTGTLLKSVLRKALNISPCHIWHLAIMPCFDKKLEASRQEL 292
Query: 258 YN---EELGY-------RDVDCVITAVELEVLLANE-----------LATTTLQEEKDGI 296
N + L + RDVDCVIT+ EL +L + L +++ D
Sbjct: 293 TNASWQGLSWTESHTPVRDVDCVITSRELLMLATSRNISLLNLPMKPLPPSSITPFPDTY 352
Query: 297 LD-WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
L+ + + + PH G SGGY +++L+ R+ PG ++ + RN D+ E
Sbjct: 353 LEPFLFPKSLPHVQSPAAGP-SGGYLYHILTTYQRR-NPGSH--IQTQRGRNSDVIEYAL 408
Query: 356 T--CGDVTLRFCIANGFRNIQNLIQKLK---RKRLP------------------------ 386
T GD ++ GFRNIQNL++KLK RLP
Sbjct: 409 TSNSGDTIIKAARYYGFRNIQNLVRKLKPPRTSRLPGAKPIIARRAAGAGSVAGNASVTD 468
Query: 387 YDFIEIMACPSGCLNGGAQIRNE---KVASPKETALELETILCDLAKSEPRENATLEHLY 443
+IE+MACP GC NGG Q+R E ++ PK D A+ + + H
Sbjct: 469 CSYIEVMACPGGCTNGGGQVRVEDAREINPPKLEEQPSTQAPVDSAQLQQSTSKPTPHEQ 528
Query: 444 KAWLG 448
+AWL
Sbjct: 529 RAWLA 533
>gi|313227872|emb|CBY23021.1| unnamed protein product [Oikopleura dioica]
Length = 451
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 236/499 (47%), Gaps = 77/499 (15%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
FSG +++ DLDDFIGP EC KP+ I+KP + G +++ DG+Y + +KL+K
Sbjct: 3 FSGTVRIGDLDDFIGPGLECTKPVDIQKPKRGQVG-RVKRNKDGSYADSSG---KKLEKA 58
Query: 66 EISLTDCLACSGCITSAESVLITQQSH-----EEVMKVIRENNAHKASSNENTKTIVLSL 120
+I+L DCLACSGC+TSAE+VLIT QS +E V+++ ++ +V++L
Sbjct: 59 KITLADCLACSGCVTSAETVLITAQSTVQLSLDEFYSVLQKKSSK----------VVVTL 108
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCG---FFKRLGVDLVLDVGIAHCFSLVELENEFLDRF 177
+ Q SL +F + + + G +LGV D L F
Sbjct: 109 SPQSRSSLAQRFRHTGSKNLYSPLGALPMLHKLGVSKTRD----------------LTPF 152
Query: 178 LSGGGPLFTSECPGWV---CYAEKSHGEFILPYISRVKSPQQVMGS--LIKTHLAEKLGV 232
L S G K+ + P + ++SP+ IK +L
Sbjct: 153 LPEQSGQRASSLLGLSRIRLLRRKNARRYACP--ASLESPKSSGKDEKWIKLNLC----T 206
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELG--YRDVDCVITAVELEVLLANELATTTLQ 290
IYHVT+MPC+DKKLEA+R +F E G +DVDCV+ E+E LL + L L+
Sbjct: 207 ENKDIYHVTVMPCFDKKLEAARQEFQIESNGRIVKDVDCVLATTEIEKLLTDNLGDDELE 266
Query: 291 ------EEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKP 344
E +D D+ + HR G GSGGY V A L G P E +
Sbjct: 267 SVAAAFEHEDNSSDFVY----SHR-----GGGSGGYLDYVYQSASESLF-GRKPSEELRF 316
Query: 345 LR---NPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKR-LPYDFIEIMACPSGC 399
R N D E T G+V LRF A GFR+IQNL+ +LK KR YD+IE+MACPSGC
Sbjct: 317 TRVRNNKDFLETTLEIDGEVKLRFAKAYGFRSIQNLVTRLKTKRGNAYDYIEVMACPSGC 376
Query: 400 LNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHML 459
LNGGAQIR + + + L P E L+ D K L
Sbjct: 377 LNGGAQIRYDDREMNESILTRMTDDYNALESYRPLTCEKFESLFTQL----KRDIDKQSL 432
Query: 460 NTSYHNIPKNNI-ALNVKW 477
TS+ I K AL +KW
Sbjct: 433 YTSFRAIQKEETNALTIKW 451
>gi|241949543|ref|XP_002417494.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|259511267|sp|B9W8S4.1|NAR1_CANDC RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|223640832|emb|CAX45147.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 584
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 232/498 (46%), Gaps = 119/498 (23%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKP-----------------------IPIEKPSGPRTGAK 42
S +L DL+DFI P CIKP I I+ P +K
Sbjct: 1 MSALLSADDLNDFISPGVACIKPPASTNTNTNTTTTDSYNENGEVEIQIDSQGNPLEISK 60
Query: 43 IRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIREN 102
I DG IQ TN +L +ISL DCLACSGCITSAE VL+ Q SH+E++K ++
Sbjct: 61 I----DGKQIQ-TN----QLTPAQISLADCLACSGCITSAEEVLVAQHSHQELIKALQ-- 109
Query: 103 NAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIA 161
S K V+S++ Q SL + ++ E + L F K++G ++ +
Sbjct: 110 ------SPTKNKVFVVSISHQSRASLAMAYNVTIEIMDKLLINLFIKQMGFTYIIGTSLG 163
Query: 162 HCFSLVELENEFLDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSL 221
SL+ E ++R + GP+ +S CPGWV YAEK+H +I+P +S +KSPQQ+ G L
Sbjct: 164 RKLSLINEAKEVINR-KTEEGPILSSICPGWVLYAEKTH-PYIIPKLSTIKSPQQITGCL 221
Query: 222 IKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEE--------LGYRDVDCVITA 273
+K E L + S IYH+++MPC+DKKLE++R + Y+ E + DVDCVITA
Sbjct: 222 LKNLTCEALQIDKSEIYHLSIMPCFDKKLESARPEIYDNENEEDKSISISVPDVDCVITA 281
Query: 274 VELEVLLA-----NELATTTLQEEKDGILD--------------WPWDEHNPHRMLLVNG 314
EL LL + Q G LD WP+ E + +G
Sbjct: 282 KELITLLEECPQYQLIPPQPTQPTLGGDLDLSVTEIYKQYAPPNWPFIE---YSWSNDSG 338
Query: 315 TGSGGYAHNVLSHAIRQLC--PGESP---VVEFKPLRNPDIREA--TFTCGDVTLRFCIA 367
+ SGGYA+N L+ L G P + RN DI E + + +
Sbjct: 339 SSSGGYAYNYLNIYRNDLVLRKGYDPNKFTINLINGRNSDIYEMRLIYDSKETLASAAVV 398
Query: 368 NGFRNIQNLIQKLK------------------RKRL---------------------PYD 388
NGFRNIQNL++KLK R R+ D
Sbjct: 399 NGFRNIQNLVRKLKPNTNKSMNNKINPLVARRRARMINRGKSESISQEIEIEIADASKVD 458
Query: 389 FIEIMACPSGCLNGGAQI 406
++EIMACP+GC+NGG QI
Sbjct: 459 YVEIMACPNGCINGGGQI 476
>gi|452987683|gb|EME87438.1| hypothetical protein MYCFIDRAFT_201123 [Pseudocercospora fijiensis
CIRAD86]
Length = 605
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 240/487 (49%), Gaps = 103/487 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P ++P QD G + T E+K+
Sbjct: 1 MSAILSADDLNDFINPGVACIKPVENLPQQQP-----------QDSGNPYEVTT--EDKV 47
Query: 63 KK------VEISLTDCLACSGCITSAESVLITQQSHEEV---------MKVIRENNAHKA 107
+ISLTDCLACSGC+TSAE+VL++ QSH EV M++ R N
Sbjct: 48 NSGTIAAPAQISLTDCLACSGCVTSAEAVLVSLQSHGEVLDTLDRYHEMRLPRVNGDAGC 107
Query: 108 SSNE---NTKTIVLSLAIQPVLSLGAKFALSHEQ---VVAKL--------CGFFKRLGVD 153
+ + K V S++ Q SL A +++S + ++++L G G
Sbjct: 108 KKEQCCGDGKIFVASVSPQARASLAATYSVSEREAGYMISQLLSGPLGVRSGGKNGSGFA 167
Query: 154 LVLDVGIAHCFSLV----ELENEFLDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYIS 209
V+D SLV E+E + P+ TS CPGWVCYAEK+H +LP++S
Sbjct: 168 WVVDTNAMREASLVAAAEEVEQSLVQLPEGQKKPVITSVCPGWVCYAEKTH-PHMLPHLS 226
Query: 210 RVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN------EELG 263
++KSPQ + G L+K+ LA++ GV P +++H+ +MPC+DKKLEASRA+ + E
Sbjct: 227 KLKSPQALTGVLLKSVLAKQFGVKPQNLWHLAIMPCFDKKLEASRAELTSHLWHGQEGDA 286
Query: 264 YRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWPWDEHNPHRMLL----------- 311
RDVDCVITA EL +L + +++ L + G L P+ E + LL
Sbjct: 287 VRDVDCVITARELLMLAESRDISFPGLPKHPVGDLP-PFPEPAVNEFLLGLPRGQKRKRE 345
Query: 312 -VNGTG-SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRFCIAN- 368
++ G SGGY ++L Q + + + RN D+ E + D F A
Sbjct: 346 DMDAIGTSGGYLWHILKTKQAQHVGSQ---IRSQRGRNNDVSEYSVVLADGEPVFKAARY 402
Query: 369 -GFRNIQNLIQKL---KRKRLP------------------------YDFIEIMACPSGCL 400
GFRNIQNL++KL K R+P Y ++E+MACP GC
Sbjct: 403 YGFRNIQNLVRKLKPVKASRMPGATGRKFGTSRRPGAASAGGDSNDYAYVEVMACPGGCT 462
Query: 401 NGGAQIR 407
NGG QI+
Sbjct: 463 NGGGQIK 469
>gi|326484607|gb|EGE08617.1| LET1 [Trichophyton equinum CBS 127.97]
Length = 597
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 254/547 (46%), Gaps = 115/547 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ T K + ++ E E+
Sbjct: 1 MSAILSADDLNDFISPGVACIKPV--------ETLPKKQEENPYEVTTEDKLEEQNPPPA 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIREN-----NAHKASSNENTKTIVLSL 120
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + N + + + K V S+
Sbjct: 53 QISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDANPEIRLDGEGGAEARDGKIFVASV 112
Query: 121 AIQPVLSLGAKFALSH-------EQVVAKLCGFFK----RLGVDLVLDVGIAHCFSLVEL 169
+ Q SL + + +S EQ ++ G G V+D I +++EL
Sbjct: 113 SPQVRASLASTYGISERNAGYMIEQFLSGPNGLRAGGQHGSGFTWVVDTNIMRQ-AVLEL 171
Query: 170 ENEFLDRFLSGGGPL----------------FTSECPGWVCYAEKSHGEFILPYISRVKS 213
+ L+ PL S CPGW+CYAEK+H +LP++SR+KS
Sbjct: 172 STAEVAESLNAAAPLTPHDESGKFSIPNRPILASSCPGWICYAEKTH-PHVLPHLSRLKS 230
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN-----EELG----- 263
PQ + G+ +KT +++KL PS I+H+ +MPC+DKKLEASR + + E L
Sbjct: 231 PQALTGTFLKTIISKKLNTPPSQIWHLAVMPCFDKKLEASRQELTDVSWRGEALDKASSP 290
Query: 264 YRDVDCVITAVELEVLLA--NELATTTLQEEKDGILDWPWDEHNPHRMLLVNGT------ 315
RDVDCVIT+ EL +L + N + E L P+ + + L + T
Sbjct: 291 VRDVDCVITSKELLMLASSRNISLPSLPLEPLPTHLQTPFPDQTIAQFLSTSNTLHFTQP 350
Query: 316 ----GSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--TCGDVTLRFCIANG 369
SGGY H++L+ Q +S +++ + RN D+ E T G+ ++ G
Sbjct: 351 AAAGPSGGYLHHLLT--TYQSKHADS-IIQSQRGRNADVVEYTLVSAAGEPIIKAARYYG 407
Query: 370 FRNIQNLIQKLK---RKRLP-----------------------------YDFIEIMACPS 397
FRNIQNL++KLK RLP + ++E+MACP
Sbjct: 408 FRNIQNLVRKLKPARASRLPGSRANGPGARARPAPVSNGKPGAPIPPAEFAYVEVMACPG 467
Query: 398 GCLNGGAQIR-------NEKVASPKETALELETILCDLAKSEPREN-ATLEHLYKAWLGG 449
GC NGG QIR N +A P+ +A E + K P + A L + +A+
Sbjct: 468 GCTNGGGQIRLEDARQANSSLALPEGSASEQSS------KPTPHDQRAWLARVDEAYYSD 521
Query: 450 KSTDKGK 456
S D G+
Sbjct: 522 SSEDGGQ 528
>gi|119194505|ref|XP_001247856.1| hypothetical protein CIMG_01627 [Coccidioides immitis RS]
gi|121927206|sp|Q1E736.1|NAR1_COCIM RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|392862908|gb|EAS36410.2| cytosolic Fe-S cluster assembly factor NAR1 [Coccidioides immitis
RS]
Length = 618
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 163/540 (30%), Positives = 248/540 (45%), Gaps = 115/540 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGR--EEKLK 63
S +L DL+DFI P CIKP+ R D+ AY T + E
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPAKSER--------DESAYEVTTEDKVAAENPS 52
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE---------NNAHKASSNENTK 114
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + N + + + +
Sbjct: 53 PAQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAYPELRVDGFRNGVQNGATGDAR 112
Query: 115 TIVLSLAIQPVLSLGAKFALSHEQVVAKL-----------------CGFFKRLGVDLVLD 157
V S++ Q S+ A + +S ++ + GF + +++ D
Sbjct: 113 IFVASVSPQVRASMAATYGVSEKEAGYMIEQFLSGPQGLRAGGQHGSGFTWVVDTNVIRD 172
Query: 158 VGIAHCFSLVELENEFLD--------RFLSGGGPLFTSECPGWVCYAEKSHGEFILPYIS 209
V + V D F P+ +S CPGW+CYAEK+H +LP++S
Sbjct: 173 VVLELTTDEVTASRAKFDSTATSESAEFPIPRQPILSSACPGWICYAEKTH-PHVLPHLS 231
Query: 210 RVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE--------- 260
R+KSPQ + G+ IKT L+++L V PS I+H+ +MPC+DKKLEASR + +
Sbjct: 232 RLKSPQALTGTFIKTILSKRLNVPPSRIWHLAIMPCFDKKLEASRQELTDASWQTTNHDI 291
Query: 261 ------ELGYRDVDCVITAVELEVLLANE--------------LATTTLQEEKDGILDWP 300
+ RDVDCVIT+ EL +L ++ TT + + I +
Sbjct: 292 FASPAMDQPIRDVDCVITSRELLMLASSRNISLLTLPLTPLPSSFTTPFPDPR--IAQFL 349
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT---C 357
+ +H+ + +G SGGY H++L+ + L P + ++ + RN D+ + T
Sbjct: 350 FPKHHASNQSVSSGP-SGGYLHHLLT-THQALHPNST--IQAQRGRNADVIDYTLVSAET 405
Query: 358 GDVTLRFCIANGFRNIQNLIQKL---KRKRLP-------------------------YDF 389
G ++ GFRNIQNL++KL K RLP Y +
Sbjct: 406 GRPIIKAARYYGFRNIQNLVRKLKPAKTSRLPGARAAVSRRTGISASHTAAGGGVSDYAY 465
Query: 390 IEIMACPSGCLNGGAQIRNEKVASPKETA-LELETILCDLAKSEPRENATLEHLYKAWLG 448
IE+MACP GC NGG QIR E ++TA + +I ++ ++ +AWL
Sbjct: 466 IEVMACPGGCTNGGGQIRVEDA---RDTATIATSSIDGSAPTAQTSQHKPTPQEQRAWLA 522
>gi|315042750|ref|XP_003170751.1| LET1 [Arthroderma gypseum CBS 118893]
gi|311344540|gb|EFR03743.1| LET1 [Arthroderma gypseum CBS 118893]
Length = 602
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 230/498 (46%), Gaps = 108/498 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGR--EEKLK 63
S +L DL+DFI P CIKP+ A + Q++ Y T + E+
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVE----------ALPKKQEENLYEVTTEDKLEEQNPP 50
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNE-----NTKTIVL 118
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + N + + + K V
Sbjct: 51 PAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDANPEIRIDGRDGIEVGDGKIFVA 110
Query: 119 SLAIQPVLSLGAKFALSH-------EQVVAKLCGFFKR----LGVDLVLDVGIAHC---- 163
S++ Q SL A + +S EQ + CG G V D I
Sbjct: 111 SVSPQVRASLAATYGISEKNAGYIIEQFLRGPCGLRAGGQHGSGFSWVADTNIMRQAVLE 170
Query: 164 FSLVELENEFL-----------DRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVK 212
S E+ +F P+ S CPGW+CYAEK+H +LPY+SR+K
Sbjct: 171 LSTAEVTESLASSTSTTSHDESGKFSIPSRPVLASSCPGWICYAEKTH-PHVLPYLSRLK 229
Query: 213 SPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL---------- 262
SPQ + G+ +KT +++KL + PS I+H+ +MPC+DKKLEASR + +
Sbjct: 230 SPQALTGTFLKTIISKKLNISPSCIWHLAIMPCFDKKLEASRQELTDVSWRGNASDEGSS 289
Query: 263 GYRDVDCVITAVELEVLLA--NELATTTLQEEKDGILDWPWDEHNPHRMLLVNGT----- 315
RDVDCVIT+ EL +L + N + E L P+ + + L N T
Sbjct: 290 PVRDVDCVITSKELLMLASSRNISLPSLPLEPLPTNLSTPFPDQTIAQFLSTNNTLHSAQ 349
Query: 316 -----GSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--TCGDVTLRFCIAN 368
SGGY H++L+ Q +S +++ + RN D+ E T G+ ++
Sbjct: 350 PAAAGPSGGYLHHLLT--TYQSKHADS-IIQSQRGRNADVVEYTLVSATGEPIIKAARYY 406
Query: 369 GFRNIQNLIQKLK---RKRLP----------------------------------YDFIE 391
GFRNIQNL++KLK RLP + ++E
Sbjct: 407 GFRNIQNLVRKLKPARASRLPGSRAMQPNPNGPGARARPAPIANGKPGAPAAPSEFAYVE 466
Query: 392 IMACPSGCLNGGAQIRNE 409
+MACP GC NGG QIR E
Sbjct: 467 VMACPGGCTNGGGQIRLE 484
>gi|238878683|gb|EEQ42321.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 605
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 214/439 (48%), Gaps = 74/439 (16%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKP---------SGPRTGAKIRIQDDG------- 49
S +L DL+DFI P CIKP+ ++ IQ D
Sbjct: 1 MSALLSADDLNDFISPGVACIKPLASSSTNTTTTTNTTDSYNENGEVEIQIDSQGNPLEI 60
Query: 50 AYIQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASS 109
+ I + + KL +ISL DCLACSGCITSAE VL+ Q SH+E++K ++ S
Sbjct: 61 SKIDDKQFQTNKLTPAQISLADCLACSGCITSAEEVLVAQHSHQELIKALQ-------SQ 113
Query: 110 NENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVE 168
E K V+S++ Q SL + +S E + L F +++G ++ + SL+
Sbjct: 114 KETNKVFVVSISHQSRASLAMAYNVSIENMDKCLIDLFIRQMGFTYIVGTSLGRKLSLIN 173
Query: 169 LENEFLDRFLSGGG-----------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQV 217
E ++R GG P+ +S CPGWV YAEK+H FI+P +S VKSPQQ+
Sbjct: 174 EAKEIINRKTKSGGTGGIDSDSSSGPILSSICPGWVLYAEKTH-PFIIPKMSTVKSPQQI 232
Query: 218 MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEE----------LGYRDV 267
G L+K + L + S IYH+++MPC+DKKLE++R + Y EE + DV
Sbjct: 233 TGCLLKNLTSNSLNIEKSKIYHLSIMPCFDKKLESARPEVYEEEEEEEEEDKALVSVPDV 292
Query: 268 DCVITAVELEVLLAN----ELATTTLQEEK---DGIL------------DWPWDEHNPHR 308
DCVITA EL LL +L TL +E+ G L +WP+ E +
Sbjct: 293 DCVITAKELITLLEECPQYQLIPPTLPQEELIGGGCLSMTEIYKQYAPPNWPFIEISWSN 352
Query: 309 MLLVNGTGSGGYAHNVLS----HAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVT--L 362
+G+ SGGYA+N L+ I + G + RNPDI E D
Sbjct: 353 D---SGSASGGYAYNYLTIYRNDLILKGYDGNKFTINLINGRNPDIYEMRLMYNDKEKLA 409
Query: 363 RFCIANGFRNIQNLIQKLK 381
+ NGFRNIQNL++KLK
Sbjct: 410 SAAVVNGFRNIQNLVRKLK 428
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 18/19 (94%)
Query: 388 DFIEIMACPSGCLNGGAQI 406
D++EIMACP+GC+NGG QI
Sbjct: 487 DYVEIMACPNGCINGGGQI 505
>gi|424513093|emb|CCO66677.1| unnamed protein product [Bathycoccus prasinos]
Length = 603
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 225/475 (47%), Gaps = 74/475 (15%)
Query: 6 FSGVLQLTD--LDDFIGPSQECIKPIPIE----------KPSGPRTGAKI--RIQDDGAY 51
FSG ++L+ L+D+I PSQ CI P+ + +G G +I R +
Sbjct: 51 FSGAVKLSSSSLNDYIAPSQACIIPLSSDGNTLLVNDGLHDAGEGDGGEILLRAKRGAEN 110
Query: 52 IQETNGREEKLKK-----VEISLTDCLACSGCITSAESVLITQQSHEEVM--KVIRENNA 104
+ + +E K +++SL+DCLACSGC+TSAE+VL+ QQS EE + E N
Sbjct: 111 KKRFDVAKEDFSKDGKSMIKVSLSDCLACSGCVTSAETVLMEQQSVEEFLGQNFSSEGNI 170
Query: 105 HKASSNENTKT--------IVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFK-RLGVDLV 155
+ +V++L+ Q SL K+++ +E+++ K+CGFFK V
Sbjct: 171 QPVGGTHDRGRGGGGRRRRLVVTLSPQSTASLAVKYSVKYEEMLEKMCGFFKTHFNARAV 230
Query: 156 LDVGIAHCFSLVELENEFLDRFLSGGG--PLFTSECPGWVCYAEKSHGEFI-LPYISRVK 212
A S EF +R G P+ S CPGWVCYAEK+ + +++ K
Sbjct: 231 CSSTEARAASRARYAKEFTERKSKSSGLLPMIASACPGWVCYAEKTENALRDVNLLAKAK 290
Query: 213 SPQQVMGSLIKT--------HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELG- 263
SPQ + G+ K E+ YHV++MPC+DKKLEASR +F + G
Sbjct: 291 SPQAIAGTFAKKGRRAAFSEDTEEEEEEEEEEAYHVSVMPCFDKKLEASRREFKTKREGD 350
Query: 264 ------------YRDVDCVITAVELEVLL------ANELATTTLQEEK-----------D 294
+ DCV+T E+ LL +E +L K +
Sbjct: 351 VLGQGKDDDVDGVNETDCVLTTTEVVELLEKKCNIVDEAGVRSLPSAKIDSMFASWFRTE 410
Query: 295 GILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE--SPVVEFKPLRNPDIRE 352
++D DE + SG Y V A R L + +E+K L N D+RE
Sbjct: 411 DMMDVEEDEQEDALLPPAFAATSGAYLEYVFRKAARDLYGVDLRGKDLEYKTLTNADMRE 470
Query: 353 ATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI 406
G+V L+F +A GFRN+QN+ + LKR+ +DF+E+MACPSGC NGG Q+
Sbjct: 471 VELKIEGEVKLKFLLAYGFRNVQNVTRALKREPNKWDFVEMMACPSGCANGGGQV 525
>gi|451992264|gb|EMD84772.1| hypothetical protein COCHEDRAFT_1199291 [Cochliobolus
heterostrophus C5]
gi|451999226|gb|EMD91689.1| hypothetical protein COCHEDRAFT_1175901 [Cochliobolus
heterostrophus C5]
Length = 621
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 234/517 (45%), Gaps = 129/517 (24%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAY---IQETNGRE 59
S +L DL+DFI P CIKPI P+++ + AY +E
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPVQQE-----------ETSNAYEVTTEEKAAAS 49
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE------------------ 101
+ ISLTDCLACSGC+TSAE+VL++ QSH EV+ + +
Sbjct: 50 QPPPPASISLTDCLACSGCVTSAEAVLVSLQSHTEVLTTLDKYRSLRAPWQVQNGMNGVA 109
Query: 102 ----NNAHKASSNENT-----KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFK---- 148
+N ++ N N K V S++ Q SL A F +S + +
Sbjct: 110 NGYGHNGTSSAVNGNQTEAEGKLFVASVSPQTRASLAAVFNISEVEAGNMISQLLSGPNG 169
Query: 149 -RLGVD------LVLDVGIAHCFSLVELENEFLDRFLSGGG------------------P 183
R G D VLD LV +E + P
Sbjct: 170 LRTGGDKGSDFTWVLDTNAMREACLVAAADEVTNALSPAAAKASPQPGSEGAIDTIPKAP 229
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS CPGW+CYAEK+H ++LP++SR+KSPQ + G+LIK+ L+E+ VHPS I+H+ +M
Sbjct: 230 ILTSACPGWICYAEKTH-PYVLPHLSRLKSPQALTGTLIKSVLSERYHVHPSQIWHLAIM 288
Query: 244 PCYDKKLEASRADF--------YNE-ELGYRDVDCVITAVELEVLLANE------LATTT 288
PC+DKKLEASR + YN+ E RD DCVITA EL L A L +
Sbjct: 289 PCFDKKLEASRGELTSAAWLPSYNQSEEKIRDTDCVITARELLHLAAARGINFVNLPRSP 348
Query: 289 LQEEK-----DGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFK 343
L + D LD + + V SGGY +++L + PG S +
Sbjct: 349 LSQSDRIPFPDPKLDAFLFPSSRRKNQSVAAGPSGGYLYHIL-QTYQARNPGSS--ISVV 405
Query: 344 PLRNPDIREATFTCGDVTL----RFCIANGFRNIQNLIQKLK---RKRLP---------- 386
RN D+ E + G T+ RF GFRNIQNL+++LK RLP
Sbjct: 406 RGRNADVVEYSVVQGSETIIKAARFY---GFRNIQNLVRRLKPARASRLPGGKTGVSRKP 462
Query: 387 ------------YDFIEIMACPSGCLNGGAQIRNEKV 411
Y ++E+MACP GC NGG Q++ ++V
Sbjct: 463 GGTGAAGEGVKDYAYVEVMACPGGCTNGGGQVKVQEV 499
>gi|320039449|gb|EFW21383.1| iron hydrogenase [Coccidioides posadasii str. Silveira]
Length = 618
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 242/537 (45%), Gaps = 109/537 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGR--EEKLK 63
S +L DL+DFI P CIKP+ R D+ AY T + E
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPAKSER--------DESAYEVTTEDKVAAENPS 52
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE---------NNAHKASSNENTK 114
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + N + + + +
Sbjct: 53 PAQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAYPELRVDGFRNGVQNGATGDAR 112
Query: 115 TIVLSLAIQPVLSLGAKFALSHEQVVAKL-----------------CGFFKRLGVDLVLD 157
V S++ Q S+ A + +S ++ + GF + +++ D
Sbjct: 113 IFVASVSPQVRASMAATYGVSEKEAGYMIEQFLSGPQGLRAGGQHGSGFTWVVDTNVIRD 172
Query: 158 VGIAHCFSLVELENEFLD--------RFLSGGGPLFTSECPGWVCYAEKSHGEFILPYIS 209
V + D F P+ +S CPGW+CYAEK+H +LP++S
Sbjct: 173 VVLELTTDEATASRAKFDSTATSESAEFPIPRKPILSSACPGWICYAEKTH-PHVLPHLS 231
Query: 210 RVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE--------- 260
R+KSPQ + G+ IKT L+++L V PS I+H+ +MPC+DKKLEASR + +
Sbjct: 232 RLKSPQALTGTFIKTILSKRLNVPPSRIWHLAIMPCFDKKLEASRQELTDASWQTTNHDM 291
Query: 261 ------ELGYRDVDCVITAVELEVLLANE------------LATTTLQEEKDGILDWPWD 302
+ RDVDCVIT+ EL +L ++ ++ T I + +
Sbjct: 292 FASPAMDQPIRDVDCVITSRELLMLASSRNISLLNLPLTPLPSSFTTPFPDPRIAQFLFP 351
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT---CGD 359
+H + +G SGGY H++L+ + L P + ++ + RN D+ + T G
Sbjct: 352 KHLASNQSVFSGP-SGGYLHHLLT-THQALHPNST--IQAQRGRNADVIDYTLVSAETGR 407
Query: 360 VTLRFCIANGFRNIQNLIQKL---KRKRLP-------------------------YDFIE 391
++ GFRNIQNL++KL K RLP Y +IE
Sbjct: 408 PIIKAARYYGFRNIQNLVRKLKPAKTSRLPGARATVSRRTGTSAPHTAAGGGVSDYAYIE 467
Query: 392 IMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLG 448
+MACP GC NGG QIR E TA +I ++ ++ +AWL
Sbjct: 468 VMACPGGCTNGGGQIRFEDARDTATTA--TSSIDGSAPTAQTSQHKPTPQEQRAWLA 522
>gi|259511476|sp|A5DKC0.2|NAR1_PICGU RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|190347367|gb|EDK39623.2| hypothetical protein PGUG_03721 [Meyerozyma guilliermondii ATCC
6260]
Length = 531
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 222/467 (47%), Gaps = 76/467 (16%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTG---AKIRIQDDGA--YIQETNGREE 60
S +L DL+DFI P CIKP E S + +I+I ++G I + +G +
Sbjct: 1 MSALLSADDLNDFISPGIACIKPTVTENRSQEASEYGEVEIQIDENGKPLEISKIDGATK 60
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
L +ISL DCLACSGCITSAE +L+ Q SH E++K ++E N K V S+
Sbjct: 61 NLSPAQISLADCLACSGCITSAEEILVAQHSHNELIKALKEKKT-------NNKIFVASI 113
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q SL + + + L ++G V+ G+ SL+ ++R
Sbjct: 114 SHQARASLATAYYMKVSDIDRLLVDLLVNQMGFTYVVGTGLGRKLSLINESQSVIERKEH 173
Query: 180 G-GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
G GP+ +S CPGWV YAEK+H +L IS KSPQQ+ G L+K+ A +L V IY
Sbjct: 174 GFQGPILSSICPGWVLYAEKTHPH-VLSRISDTKSPQQITGCLLKSLTAHQLEVERDQIY 232
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-----ELATTTLQEEK 293
H+++MPC+DKKLE++R + + L DVDCV+T EL LL L L
Sbjct: 233 HLSIMPCFDKKLESARPE-QDPSLVSNDVDCVLTPKELVTLLDECKDKFSLTFDALSHSS 291
Query: 294 DGILD---------WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLC---PGESPVVE 341
+ D WP+ E +G+ SGGY +N L LC P +
Sbjct: 292 GSLTDLYQSCAPANWPYVE---LSWSSDSGSSSGGYGYNYLQLLQSHLCLRDPQQYQPQN 348
Query: 342 FK----PLRNPDIREATFTCGDVTL-RFCIANGFRNIQNLIQKLK--------------- 381
F+ RN DI E D + I NGFRNIQNL++KLK
Sbjct: 349 FRLESVAGRNKDIYELRLVYNDNQVASSAIVNGFRNIQNLVRKLKPTSSTTTTKTNPLVA 408
Query: 382 --RKRLPY------------------DFIEIMACPSGCLNGGAQIRN 408
+ RL D++EIMACP+GC+NGG QI +
Sbjct: 409 RRKARLSSKRSESGAQDVQQADASKCDYVEIMACPNGCINGGGQINS 455
>gi|401886802|gb|EJT50820.1| hypothetical protein A1Q1_08033 [Trichosporon asahii var. asahii
CBS 2479]
Length = 614
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 207/390 (53%), Gaps = 45/390 (11%)
Query: 25 CIKPIPIEKPSGPRTG--------------AKIRIQDDGAYIQ---ETNGREEKLKKVEI 67
CI P+ KP+ P +I+I DD Y + + ++L K EI
Sbjct: 9 CIIPVRSSKPAAPAGSNNVSYFCYVQADAQTEIQIGDDNTYYEVSTDVAASRQQLAKAEI 68
Query: 68 SLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLS 127
+L DCLACSGCITS ES+LIT QSH EV+ I++ + + VLS+A Q + S
Sbjct: 69 NLNDCLACSGCITSTESLLITMQSHAEVLTFIKDKDPRRP---------VLSIAPQTLAS 119
Query: 128 LGAKFALSHE--QVVAKLCGFF--KRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
L A + S ++ ++ F + G VLD A +L + +EF R S
Sbjct: 120 LSAAYGGSIPLLTLLRRIRSFLSSEERGGWTVLDTTFARHLALRQSVSEFRSRQQSSKNL 179
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ S CPGWVCYAEK+ G+ +LP +S +SPQ + G+++K HLAEK G + +YHVT
Sbjct: 180 PMLASACPGWVCYAEKAQGD-LLPLLSSTRSPQAMQGAIVKRHLAEKWGKKANEVYHVTA 238
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA---TTTLQEEKDGILDW 299
MPCYDKKLEASR+DFY++ ++ DCV+T EL++LL +EL + + E D +
Sbjct: 239 MPCYDKKLEASRSDFYDDVAKTKETDCVLTTGELDLLL-SELGFDPSAPVPGEDDPVPPA 297
Query: 300 PWDEHNPH----RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
D P +L G+ SG Y +L ++ Q P + + + LRN E F
Sbjct: 298 SGDYSRPDAGFPELLTHPGSSSGSYLMALLV-SLAQEHPDAT--LHVRRLRNSPDNEEYF 354
Query: 356 --TCGDVTLRFCIANGFRNIQNLIQKLKRK 383
+ G V + GFRN+QNL++K+ ++
Sbjct: 355 LESGGQVLFKGARCYGFRNLQNLVRKVGKE 384
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 388 DFIEIMACPSGCLNGGAQIR 407
DF+E+MACP GC+NGG Q++
Sbjct: 447 DFVEVMACPGGCVNGGGQMK 466
>gi|169608145|ref|XP_001797492.1| hypothetical protein SNOG_07139 [Phaeosphaeria nodorum SN15]
gi|121920428|sp|Q0UM75.1|NAR1_PHANO RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|111064670|gb|EAT85790.1| hypothetical protein SNOG_07139 [Phaeosphaeria nodorum SN15]
Length = 632
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 236/513 (46%), Gaps = 118/513 (23%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPI--EKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
S +L DL+DFI P CIKPI KP ++ +D A +
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPAKPEDSSNPYEVTTEDKAA-------ASQPPP 53
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA---------------- 107
ISLTDCLACSGC+TSAE+VL++ QSH EV+ + + +A
Sbjct: 54 PASISLTDCLACSGCVTSAEAVLVSLQSHSEVLTTLDTYRSLRAPWQTQNGTNGTNGTNG 113
Query: 108 -----SSNENT-----------KTIVLSLAIQPVLSLGAKFALSHEQ---VVAKLCGFFK 148
S+N T K V S++ Q S+ A F +S + ++A+L
Sbjct: 114 TTNGHSTNGTTTNGINGHSHEGKLFVASVSPQSRASIAAVFNVSEAEAGNMIAQLLSGPS 173
Query: 149 RL------GVDL--VLDVGIAHCFSLVELENEFLDRFL-----------SGGG------- 182
L G D VLD + LV +E + S G
Sbjct: 174 GLKTGGHQGSDFTWVLDTNVVREACLVAAADEVANALSPETSNPSTKPGSEGAIDTTPKQ 233
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ TS CPGW+CYAEK+H +ILP++SR+KSPQ + G+LIK+ L+++ + PS I+HV +
Sbjct: 234 PILTSACPGWICYAEKTH-PYILPHLSRLKSPQALTGTLIKSVLSQQYNIPPSQIWHVAI 292
Query: 243 MPCYDKKLEASRADFYNE---------ELGYRDVDCVITAVELEVLLANE------LATT 287
MPC+DKKLEASR++ + + RDVDCVITA EL L + L T
Sbjct: 293 MPCFDKKLEASRSELTSSAWLPNHDATQDPVRDVDCVITARELLHLASARGINFASLPRT 352
Query: 288 TLQEEK-----DGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEF 342
L + D LD H + V SGGY +++L + PG S +
Sbjct: 353 PLSASERTPFPDPKLDAFLFPHTRRKNQDVVAGSSGGYLYHIL-QTYQAQNPGSS--ISV 409
Query: 343 KPLRNPDIREATFTCGDVT-LRFCIANGFRNIQNLIQKL---KRKRLP------------ 386
RN D+ E + G T +R GFRNIQNL+++L K RLP
Sbjct: 410 SRGRNADVVEYSLVRGSETIIRAARFYGFRNIQNLVRRLKPAKASRLPGGKTGVSRKPGA 469
Query: 387 --------YDFIEIMACPSGCLNGGAQIRNEKV 411
Y ++E+MACP GC NGG Q++ +V
Sbjct: 470 AAGGDVKDYAYVEVMACPGGCTNGGGQVKITEV 502
>gi|303311227|ref|XP_003065625.1| Iron only hydrogenase large subunit, C-terminal domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
gi|240105287|gb|EER23480.1| Iron only hydrogenase large subunit, C-terminal domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
Length = 618
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 242/537 (45%), Gaps = 109/537 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGR--EEKLK 63
S ++ DL+DFI P CIKP+ R D+ AY T + E
Sbjct: 1 MSAIISADDLNDFISPGVACIKPVETLPAKSER--------DESAYEVTTEDKVAAENPS 52
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE---------NNAHKASSNENTK 114
+ISLTDCLACSGC+TSAE+VLI+ QSH EV+ + N + + + +
Sbjct: 53 PAQISLTDCLACSGCVTSAEAVLISLQSHAEVLNTLDAYPELRVDGFRNGVQNGATGDAR 112
Query: 115 TIVLSLAIQPVLSLGAKFALSHEQVVAKL-----------------CGFFKRLGVDLVLD 157
V S++ Q S+ A + +S ++ + GF + +++ D
Sbjct: 113 IFVASVSPQVRASMAATYGVSEKEAGYMIEQFLSGPQGLRAGGQHGSGFTWVVDTNVIRD 172
Query: 158 VGIAHCFSLVELENEFLD--------RFLSGGGPLFTSECPGWVCYAEKSHGEFILPYIS 209
V + D F P+ +S CPGW+CYAEK+H +LP++S
Sbjct: 173 VVLELTTDEATASRAKFDSTATSESAEFPIPRKPILSSACPGWICYAEKTH-PHVLPHLS 231
Query: 210 RVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE--------- 260
R+KSPQ + G+ IKT L+++L V PS I+H+ +MPC+DKKLEASR + +
Sbjct: 232 RLKSPQALTGTFIKTILSKRLNVPPSRIWHLAIMPCFDKKLEASRQELTDASWQTTNHDM 291
Query: 261 ------ELGYRDVDCVITAVELEVLLANE------------LATTTLQEEKDGILDWPWD 302
+ RDVDCVIT+ EL +L ++ ++ T I + +
Sbjct: 292 FASPAMDQPIRDVDCVITSRELLMLASSRNISLLNLPLTPLPSSFTTPFPDPRIAQFLFP 351
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT---CGD 359
+H + +G SGGY H++L+ + L P + ++ + RN D+ + T G
Sbjct: 352 KHLASNQSVFSGP-SGGYLHHLLT-THQALHPNST--IQAQRGRNADVIDYTLVSAETGR 407
Query: 360 VTLRFCIANGFRNIQNLIQKL---KRKRLP-------------------------YDFIE 391
++ GFRNIQNL++KL K RLP Y +IE
Sbjct: 408 PIIKAARYYGFRNIQNLVRKLKPAKTSRLPGARATVSRRTGTSAPHTAAGGGVSDYAYIE 467
Query: 392 IMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLG 448
+MACP GC NGG QIR E TA +I ++ ++ +AWL
Sbjct: 468 VMACPGGCTNGGGQIRFEDARDTATTA--TSSIDGSAPTAQTSQHKPTPQEQRAWLA 522
>gi|342879391|gb|EGU80642.1| hypothetical protein FOXB_08865 [Fusarium oxysporum Fo5176]
Length = 576
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 220/475 (46%), Gaps = 82/475 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ + P + + +
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPAAPPPQPQSLETE---VILDGQQPATNPNAPA 57
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN------------ENT 113
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + A K ++ EN
Sbjct: 58 QISLTDCLACSGCVTSAEAVLVSLQSHAEVLTTLDSAPALKLVTDDSGKFRVEGLEEENA 117
Query: 114 KTIVLSLAIQPVLSLGAK--FALSHEQVVAKLCGFFKRLG-----------VDLVLDVGI 160
K V+S++ Q +L A +S L F+ V+D
Sbjct: 118 KLFVVSVSPQTRANLAAACGGGVSEGDAGHMLDNLFRGPSGIASGGKYHNEFTWVVDTNT 177
Query: 161 AHCFSLVELENEFLD----RFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
A +LV +E L + P+ S CPGWVCYAEK+H +LP+IS+VKSPQ
Sbjct: 178 AREATLVLGADEVLGTSQTETATPAKPILASSCPGWVCYAEKTH-PHVLPHISKVKSPQA 236
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL--------GYRDVD 268
+MG+L+KT L+ LG+ P I+H+ +MPC+DKKLEASR + E G RDVD
Sbjct: 237 LMGTLLKTTLSRTLGIAPGRIWHLAVMPCFDKKLEASREELTEEVWAEGETRGRGVRDVD 296
Query: 269 CVITAVELEVLLANE------LATTTLQEEKDGILDWPWDEHNPHRMLLV-----NGTGS 317
CVIT+ E+ +L + + T LQ + P+ + H L N
Sbjct: 297 CVITSKEILMLAESRGLSFFNIPKTPLQSKSLT----PFPDPKLHEFLFPRIRTGNAPRE 352
Query: 318 GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC---GDVTLRFCIANGFRNIQ 374
G + +L H ++ ++P E R ++ A ++ G+ R GFRNIQ
Sbjct: 353 AGTSGGLLYHILKSRA-AQTPGAEIVHTRGRNVDVAEYSILVNGEPVFRAARYYGFRNIQ 411
Query: 375 NLIQKLKRKR----------------------LPYDFIEIMACPSGCLNGGAQIR 407
NL+++LK R L Y ++E+MACP GC NGG QI+
Sbjct: 412 NLVRRLKPARPSRMPGGKPFGSARKPAGKAASLEYSYVEVMACPGGCTNGGGQIK 466
>gi|154287306|ref|XP_001544448.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408089|gb|EDN03630.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 630
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 252/556 (45%), Gaps = 130/556 (23%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKPI S PR K +D +E + V
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIE----SLPRKADK-NSKDVYEVAREDKIHPDNPPSV 55
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKV--------------------IRENNAH 105
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ +REN+A
Sbjct: 56 QISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDSCAELRIDELNGCSNAQRLRENDAG 115
Query: 106 KASSNENTKT------IVLSLAIQPVLSLGAKFALSH-------EQVVA-----KLCGFF 147
++ E T V S++ Q SL A + +S EQ ++ + G +
Sbjct: 116 FSAEGEQRTTESGGKIFVASVSPQARASLAATYGISEREAGYLIEQFLSGPDGLRAGGAY 175
Query: 148 KRLGVDLVLDVGIAH--CF---------SLVELENEFLDRFLSGGGPLFTSECPGWVCYA 196
G V+D + C SL ++ ++ F + P+ +S CPGW+CYA
Sbjct: 176 GN-GFTWVIDTNVMRQVCLELSVSEVTESLNSSKDTLIETFPAPKRPVLSSACPGWICYA 234
Query: 197 EKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD 256
EK+H +LP+ISR+KSPQ + G+L+KT L++ L + + I+H+ +MPC+DKKLEASR +
Sbjct: 235 EKTH-PHVLPHISRLKSPQALTGTLLKTVLSKALNISSAQIWHLAIMPCFDKKLEASRQE 293
Query: 257 FYNEELG------------------YRDVDCVITAVELEVLLANE---LATTTLQE-EKD 294
+ RDVDCVIT+ EL +L + L LQ
Sbjct: 294 LTDASWQDASSMTQKGSAPTESHSPVRDVDCVITSRELLMLATSRNISLRNLPLQPLPSP 353
Query: 295 GILDWPWDEHNP------HRMLLVNGTG-SGGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
+ +P P + + + G SGGY +++L+ + PG ++ + RN
Sbjct: 354 SVPLFPDPYFAPFLFPKSSQFVQPSAAGTSGGYLYHILT-TYQHRNPGSQ--IQTQRGRN 410
Query: 348 PDIREATFT--CGDVTLRFCIANGFRNIQNLIQKLK---RKRLP---------------- 386
D+ E GD ++ GFRNIQNL++KLK RLP
Sbjct: 411 SDVIEYALISPSGDTIIKAARYYGFRNIQNLVRKLKPPRASRLPGANPMIGRRAGGGCAA 470
Query: 387 ---------YDFIEIMACPSGCLNGGAQIRNEKVAS-----PKETALELETILCDLAKSE 432
Y +IE+MACP GC NGG QIR + P E L+ + K
Sbjct: 471 TVSSTSATDYAYIEVMACPGGCTNGGGQIRVDDARDIDTLKPNEQQQLLQQNQQSMQKLA 530
Query: 433 PRENATLEHLYKAWLG 448
P+E +AWL
Sbjct: 531 PQEQ-------RAWLA 539
>gi|451848135|gb|EMD61441.1| hypothetical protein COCSADRAFT_39174 [Cochliobolus sativus ND90Pr]
Length = 621
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 239/517 (46%), Gaps = 129/517 (24%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAY---IQETNGRE 59
S +L DL+DFI P CIKPI P++K + AY +E
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPVQKE-----------ETSNAYEVTTEEKAAAS 49
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE------------------ 101
+ ISLTDCLACSGC+TSAE+VL++ QSH EV+ + +
Sbjct: 50 QPPPPASISLTDCLACSGCVTSAEAVLVSLQSHTEVLTTLDKYRSLRALWQTQNGTNGVA 109
Query: 102 --------NNAHKASSNENT-KTIVLSLAIQPVLSLGAKFALSHEQ---VVAKLCGFFKR 149
++A S NE K V S++ Q SL A F +S + ++++L
Sbjct: 110 NGCGHNGTSSAINGSQNETEGKLFVASVSPQTRASLAAVFNVSEVEAGNMISQLLSGPNG 169
Query: 150 L------GVDL--VLDVGIAHCFSLVELENEFLDRFLSGGG------------------P 183
L G D V+D LV +E + P
Sbjct: 170 LRTSSNKGSDFTWVIDTNAVREACLVAAADEVTNALSPTAAKASPQPGSEGAIDTIPKAP 229
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS CPGW+CYAEK+H ++LP++SR+KSPQ + G+L+K+ L+E+ VHPS I+H+ +M
Sbjct: 230 ILTSACPGWICYAEKTH-PYVLPHLSRLKSPQALTGTLVKSVLSERYHVHPSQIWHLAIM 288
Query: 244 PCYDKKLEASRADF--------YNE-ELGYRDVDCVITAVEL-------EVLLANELATT 287
PC+DKKLEASR + YN+ E RD DCVITA EL + AN +
Sbjct: 289 PCFDKKLEASRGELTSAPWLPSYNQSEEKIRDTDCVITARELLHLAAARGINFANLPRSP 348
Query: 288 TLQEEK----DGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFK 343
Q ++ D LD + + V SGGY +++L + PG ++
Sbjct: 349 LSQSDRIPFPDPKLDAFLFPSSRRKNQSVAAGPSGGYLYHIL-QTYQAQNPGS--LISVV 405
Query: 344 PLRNPDIREATFTCGDVTL----RFCIANGFRNIQNLIQKLK---RKRLP---------- 386
RN D+ E + G T+ RF GFRNIQNL+++LK RLP
Sbjct: 406 RGRNADVVEYSVVQGSETIIKAARFY---GFRNIQNLVRRLKPARASRLPGGKTGVSRKP 462
Query: 387 ------------YDFIEIMACPSGCLNGGAQIRNEKV 411
Y ++E+MACP GC NGG Q++ ++V
Sbjct: 463 GGAGAAGEGVKDYAYVEVMACPGGCTNGGGQVKVQEV 499
>gi|68464731|ref|XP_723443.1| potential post-translational processing factor Narf [Candida
albicans SC5314]
gi|68465110|ref|XP_723254.1| potential post-translational processing factor Narf [Candida
albicans SC5314]
gi|74587988|sp|Q5APK7.1|NAR1_CANAL RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|46445281|gb|EAL04550.1| potential post-translational processing factor Narf [Candida
albicans SC5314]
gi|46445477|gb|EAL04745.1| potential post-translational processing factor Narf [Candida
albicans SC5314]
Length = 609
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 214/442 (48%), Gaps = 77/442 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKP---------SGPRTGAKIRIQDDG------- 49
S +L DL+DFI P CIKP+ ++ IQ D
Sbjct: 1 MSALLSADDLNDFISPGVACIKPLASSSTNTTTTTNTTDSYNENGEVEIQIDSQGNPLEI 60
Query: 50 AYIQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASS 109
+ I + + KL +ISL DCLACSGCITSAE VL+ Q SH+E++K ++ S
Sbjct: 61 SKIDDKQFQTNKLTPAQISLADCLACSGCITSAEEVLVAQHSHQELIKALQ-------SQ 113
Query: 110 NENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVE 168
E K V+S++ Q SL + +S E + L F +++G ++ + SL+
Sbjct: 114 KETNKVFVVSISHQSRASLAMAYNVSIENMDKCLIDLFIRQMGFTYIVGTSLGRKLSLIN 173
Query: 169 LENEFLDRFLSGGG-----------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQV 217
E ++R G G P+ +S CPGWV YAEK+H +I+P +S VKSPQQ+
Sbjct: 174 EAKEIINRKTKGSGTGGIDSDSSSGPILSSICPGWVLYAEKTH-PYIIPKMSTVKSPQQI 232
Query: 218 MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEE-----------LGYRD 266
G L+K + L + S IYH+++MPC+DKKLE++R + Y EE + D
Sbjct: 233 TGCLLKNLTSNSLNIEKSKIYHLSIMPCFDKKLESARPEVYEEEEEEEEEKDKALVSVPD 292
Query: 267 VDCVITAVELEVLLAN----ELATTTLQEEK---DGIL------------DWPWDEHNPH 307
VDCVITA EL LL +L TL +E+ G L +WP+ E +
Sbjct: 293 VDCVITAKELITLLEECPQYQLIPPTLPQEELIGGGCLSMTEIYKQYAPPNWPFIEISWS 352
Query: 308 RMLLVNGTGSGGYAHNVLS----HAIRQLCPGESPVVEFKPLRNPDIREATFTCG----D 359
+G+ SGGYA+N L+ I + G + RNPDI E +
Sbjct: 353 ND---SGSASGGYAYNYLTIYRNDLILKGYDGNKFTINLINGRNPDIYEMRLMYNGENKE 409
Query: 360 VTLRFCIANGFRNIQNLIQKLK 381
+ NGFRNIQNL++KLK
Sbjct: 410 KLASAAVVNGFRNIQNLVRKLK 431
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 18/19 (94%)
Query: 388 DFIEIMACPSGCLNGGAQI 406
D++EIMACP+GC+NGG QI
Sbjct: 490 DYVEIMACPNGCINGGGQI 508
>gi|452848147|gb|EME50079.1| hypothetical protein DOTSEDRAFT_165043 [Dothistroma septosporum
NZE10]
Length = 612
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 240/498 (48%), Gaps = 104/498 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L + DL+DFI P CIKPI P ++P I D Y T EEK+
Sbjct: 1 MSAILSVDDLNDFISPGVACIKPIETLPKQQP----------IDDANPYEVTT---EEKV 47
Query: 63 KK------VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN-ENT-- 113
+ISLTDCLAC+GC+TSAE+VL++ QSH EV+ + + K ++ NT
Sbjct: 48 NSGTIVPPAQISLTDCLACAGCVTSAEAVLVSLQSHGEVLDTLDKFPELKVDADVTNTSV 107
Query: 114 ------KTIVLSLAIQPVLSLGAKFALSHEQ---VVAKL--------CGFFKRLGVDLVL 156
K V S++ Q S+ A + ++ + ++A+L G G ++
Sbjct: 108 EGSVEKKLFVASVSPQSRASIAATYNVTEREAGYMIAQLLSGPAGLRSGGQHGSGFTWIV 167
Query: 157 DVGIAHCFSLVELENEFLDRFLS--------GGGPLFTSECPGWVCYAEKSHGEFILPYI 208
D + +LV + +E + P+ TS CPGW+CYAEK+H ILP++
Sbjct: 168 DTNVMREATLVAVADEVQQSNTAPIEGSTEAQKKPVITSACPGWICYAEKTH-PHILPHL 226
Query: 209 SRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN------EEL 262
S++KSPQ + G L+K+ LA+K G+ P +++H+ +MPC+DKKLEA+R++ + E
Sbjct: 227 SKLKSPQALTGVLLKSVLAKKYGMSPQNVWHLAVMPCFDKKLEAARSELTSHTWHGQEGE 286
Query: 263 GYRDVDCVITAVELEVL---------------LANELATTTLQEEKDGILDWPWDEHNPH 307
RDVDCVITA EL +L L+ +LA + + L
Sbjct: 287 AVRDVDCVITARELLMLAESRDISFPRLPKQPLSGDLAPDFPEPAVNDFLFSRQRGQKRK 346
Query: 308 RMLLVNGTG-SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRFCI 366
R + G SGGY ++L Q + V + RN D+ E + D F
Sbjct: 347 RGQETDTIGTSGGYLWHILQTKRAQHVGSQ---VMSQRGRNNDVSEYSVVDADGRAVFKA 403
Query: 367 AN--GFRNIQNLIQKL---KRKRLP-----------------------YDFIEIMACPSG 398
A GFRNIQNL+++L K R+P Y ++E+MACP G
Sbjct: 404 ARYYGFRNIQNLVRRLKPAKASRMPGASRKAGTSRRPGGAAMGGNEGEYSYVEVMACPGG 463
Query: 399 CLNGGAQIRNEKVASPKE 416
C NGG QI+ VA+ ++
Sbjct: 464 CTNGGGQIKVGDVATLRQ 481
>gi|388853420|emb|CCF53040.1| related to NAR1-similarity to human nuclear prelamin A recognition
factor [Ustilago hordei]
Length = 847
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 165/518 (31%), Positives = 237/518 (45%), Gaps = 152/518 (29%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIP-IEKPSGPRTGA------------KIRIQDDGAYI 52
FSG L LTDL+D++GPSQ CIKP+ + P+ T + +I I DG+Y
Sbjct: 3 FSGALTLTDLNDYLGPSQACIKPVEGTDAPTDHHTSSSDQIHSAATASTQIAIDRDGSYY 62
Query: 53 QE--------------TNGREE-KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMK 97
+ + RE KL+ +ISL DCLACSGC+TSAESVLIT QS EE+ +
Sbjct: 63 ESTSASTSAAAAAASGSKPRERTKLETAQISLNDCLACSGCVTSAESVLITMQSQEELRR 122
Query: 98 VIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQ------------------- 138
+ E + S+ K +V S++ Q + SL AK+ Q
Sbjct: 123 AVAEIH-----SSTRPKLLVASISTQSLASLSAKYTFQQNQQQTSSSPSSSESNQAGLST 177
Query: 139 -----VVAKLCGFFKRL-GVDLVLDVGIAHCFSLVELENEFLDRFLSGGG---------- 182
++ ++ F K + D V D A +L E E EF R +
Sbjct: 178 LPLPVLLHRISYFLKTVFQFDHVYDTTFARHIALKEHEREFFQRRANSHKHAKLNNDAAT 237
Query: 183 -------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH-- 233
P+ S CPGW+CYAEK+ GE +LPY+S KSPQQV G + K L +LG+
Sbjct: 238 RSHEPTLPMLASACPGWICYAEKTLGE-LLPYVSTTKSPQQVAGVIAKRFLPHRLGLQTR 296
Query: 234 PS-----------HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN 282
PS +IYH+T+MPCYDKKLEASR DFY++ ++VDCV+T EL+ L+ +
Sbjct: 297 PSSSTDDPASSQPNIYHLTVMPCYDKKLEASRPDFYDDITNTKEVDCVLTTGELDKLMLD 356
Query: 283 E------------------LATTTLQEEKDGILDWPWDEHN-------PH--RMLLVNGT 315
+ LA +L++ L E N PH +L G+
Sbjct: 357 QGFDLCAPVPGEQETMQQSLADLSLEQ----ALGRGASEPNANTVAILPHFPELLDQPGS 412
Query: 316 GSGGYAHNVLS---------------HAIRQLCPGESPVVEFKPLRNPDIRE-------- 352
SGGY N++ ++RQ G P ++ + +R D E
Sbjct: 413 SSGGYLFNLMRAVWLDWISQHWHQFPESVRQR--GLVPKLDVRVIRTADFTEFILRAPAQ 470
Query: 353 -------ATFTCGDVTLRFCIANGFRNIQNLIQKLKRK 383
T ++ R GFRN+QNL++KL+++
Sbjct: 471 LSLDVDPQTNLSWNILFRGAQCYGFRNLQNLVRKLQKQ 508
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 387 YDFIEIMACPSGCLNGGAQIRNEKV 411
YD++E+MACPSGC+NGG QIR V
Sbjct: 608 YDYVEVMACPSGCVNGGGQIRPPTV 632
>gi|346979535|gb|EGY22987.1| LET1 protein [Verticillium dahliae VdLs.17]
Length = 588
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 223/485 (45%), Gaps = 95/485 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQET--NGR----- 58
S +L DL+DFI P CIKP+ A DG+ E +G+
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVET-------LPAAPPPPADGSLEHEVILDGQPGGPA 53
Query: 59 EEKLKK---VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIR-----------ENNA 104
LK EISLTDCLACSGC+TSAE+VL++ QSH EV+ + E
Sbjct: 54 SSGLKPNAPAEISLTDCLACSGCVTSAEAVLVSLQSHTEVLNTLDFGPSLRIVGPDEKGQ 113
Query: 105 HKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRL-------------- 150
+ E+ + ++ P A + +RL
Sbjct: 114 FRVDGLEDESRKLFVASVSPQTRASLAAAAGSGTTEQEAGHMLERLLRGPEGLASAGQHN 173
Query: 151 -GVDLVLDVGIAHCFSLVELENEFL--DRFLSGGGP--LFTSECPGWVCYAEKSHGEFIL 205
G VLD +A LV +E L D+ + P TS CPGWVCYAEK+H +L
Sbjct: 174 NGFTWVLDTNVAREACLVLGADEVLGTDKAAASSDPKPTLTSNCPGWVCYAEKTH-PHVL 232
Query: 206 PYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE----- 260
P+IS+VKSPQ +MG+L+KT L+ KL + PS I+H+ +MPC+DKKLEASR + +
Sbjct: 233 PHISKVKSPQALMGTLLKTTLSRKLNIPPSRIWHLAVMPCFDKKLEASREELTDSVWAGD 292
Query: 261 ---ELGYRDVDCVITAVELEVL----------LANELATTTLQEEKDGILD-WPWDEHNP 306
G RDVDCVIT+ E+ +L LA + T Q D LD + +
Sbjct: 293 GKPGRGIRDVDCVITSKEVLMLADSRGFDFFSLARTNPSLTRQLFPDPQLDRFLFPPQPA 352
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRFCI 366
HR + G+ SGG + L + + PG ++ RN D+ E G F
Sbjct: 353 HRDKPIAGS-SGGNLYFTLQSVVSK-NPGSQ--IQVIRGRNADVTEYIVASGAGEPIFKA 408
Query: 367 AN--GFRNIQNLIQKLKRKR----------------------LPYDFIEIMACPSGCLNG 402
A GFRNIQNL++KLK R L Y F+E+MACP GC NG
Sbjct: 409 ARFYGFRNIQNLVRKLKPARPSRMPGGKPFGSARRPTGKTAGLEYTFVEVMACPGGCTNG 468
Query: 403 GAQIR 407
G QI+
Sbjct: 469 GGQIK 473
>gi|402078008|gb|EJT73357.1| cytosolic Fe-S cluster assembly factor nar-1 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 604
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 160/492 (32%), Positives = 233/492 (47%), Gaps = 101/492 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIR--IQDDGAYIQETNGREEKLK 63
S +L + DL+DFI P CIKP+ PS P + + DG ++
Sbjct: 1 MSAILSVDDLNDFISPGVACIKPVETLPPSQPAGDPTLEHEVILDGQPGAASS--AGAGA 58
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKV--------IRENNAHKASS-----N 110
+ISLTDCLACSGC+TSAE+VL++ QSH E++ V +R +A S +
Sbjct: 59 PAQISLTDCLACSGCVTSAEAVLVSLQSHSELLSVLDSAPALQVRGPDAQGRFSVDGLED 118
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRL---------------GVDLV 155
+ V S++ Q SL A A S ++ RL + V
Sbjct: 119 PARRLFVASVSPQSRASLAA--ACSQGVSESQAGRMLDRLLMGPEGLMAGGKWGNRFEWV 176
Query: 156 LDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISR 210
+D A L+ +E L R +G P+ T+ CPGWVCYAEK+H +LP++SR
Sbjct: 177 VDTNAARDACLLLGADEVLGRNQTGDAALAKKPILTASCPGWVCYAEKTH-PHVLPHLSR 235
Query: 211 VKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL-------- 262
VKSPQ + G+LIKT L+ L + P I+H+++MPC+DKKLEASR +
Sbjct: 236 VKSPQALTGTLIKTTLSRVLNIPPDRIWHLSIMPCFDKKLEASREELTEAVWAGNGAPGR 295
Query: 263 GYRDVDCVITAVELEVLLANE------LATTTLQEE--KDGILDWPWDEHNPHRMLLVNG 314
G RDVDCVIT+ E+ +L + L ++L+++ D ++ + N + L
Sbjct: 296 GTRDVDCVITSKEIFMLTESRSIDFFSLPASSLRQQLFPDSTINEFFFPQNSRKRPLPAA 355
Query: 315 TGSGGYAHNVL-----SHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVTLRFCIA 367
SGG + +L +HA +L E RN D+ E T G+ R
Sbjct: 356 GSSGGNLYYILQDVLSAHAGSRL--------ETARGRNVDVVEYTVVAASGETLFRAARY 407
Query: 368 NGFRNIQNLIQKLK---------------RKRLP---------------YDFIEIMACPS 397
GFRNIQNL++KLK +R+P + +IE+MACP
Sbjct: 408 YGFRNIQNLVRKLKPAKPSRMPGGKPFGSARRVPTGRGGGGPGGAGGVEHAYIEVMACPG 467
Query: 398 GCLNGGAQIRNE 409
GC NGG Q++ +
Sbjct: 468 GCTNGGGQVKAD 479
>gi|343958306|dbj|BAK63008.1| nuclear prelamin A recognition factor isoform a [Pan troglodytes]
Length = 290
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 169/296 (57%), Gaps = 8/296 (2%)
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS CPGWV YAE+ G I ++ KSPQQVMGSL+K + A + + P I+HV +
Sbjct: 1 MLTSACPGWVRYAERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVA 60
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWD 302
PCYDKKLEA + G R DCV+T+ E+ +++ +L+ +D +D +
Sbjct: 61 PCYDKKLEALQESLPPALHGSRGADCVLTSGEIAQIMEQGDLSV------RDAAVDTLFG 114
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVT 361
+ ++ +G S G+ ++ HA ++L + V ++ LRN D +E T G+V
Sbjct: 115 DLKEDKVTRHDGASSDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVV 174
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
LRF A GFRNIQN+I KLK+ + P+ F+E++AC GCLNG Q + + K ++
Sbjct: 175 LRFAAAYGFRNIQNMILKLKKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQM 234
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
E I D+ P +A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 235 EGIYADIPVRRPESSAHVQELYQEWLEGINSPKAREVLHTTYQSQERGAHSLDIKW 290
>gi|426346277|ref|XP_004040806.1| PREDICTED: nuclear prelamin A recognition factor isoform 2 [Gorilla
gorilla gorilla]
Length = 290
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 168/296 (56%), Gaps = 8/296 (2%)
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS CPGWV YAE+ G I ++ KSPQQVMGSL+K + A + + P I+HV +
Sbjct: 1 MLTSACPGWVRYAERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVA 60
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWD 302
PCYDKKLEA + G R DCV+T+ E+ +++ +L+ +D +D +
Sbjct: 61 PCYDKKLEALQESLPPALHGSRGADCVLTSGEIAQIMEQGDLSV------RDAAVDTLFG 114
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCGDVT 361
+ ++ +G S G+ ++ HA ++L + V ++ LRN D +E T G+V
Sbjct: 115 DLKEDKVTRHDGASSDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVV 174
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
LRF A GFRNIQN+I KLK+ + P+ F+E++AC GCLNG Q + + K ++
Sbjct: 175 LRFAAAYGFRNIQNMILKLKKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQM 234
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
E I D+ P +A ++ LY+ WL G ++ K + +L+T+Y + +L++KW
Sbjct: 235 EGIYADIPVRRPESSAHVQELYQEWLEGINSPKAREVLHTTYQSQEHGAHSLDIKW 290
>gi|146416741|ref|XP_001484340.1| hypothetical protein PGUG_03721 [Meyerozyma guilliermondii ATCC
6260]
Length = 531
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 214/462 (46%), Gaps = 70/462 (15%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTG---AKIRIQDDGA--YIQETNGREE 60
S +L DL+DFI P CIKP E S +I+I ++G I + +G +
Sbjct: 1 MSALLSADDLNDFISPGIACIKPTVTENRSQEALEYGEVEIQIDENGKPLEISKIDGATK 60
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
L +ISL DCLACSGCITSAE +L+ Q SH E++K ++E N K V S+
Sbjct: 61 NLSPAQISLADCLACSGCITSAEEILVAQHSHNELIKALKEKKT-------NNKIFVASI 113
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q SL + + + L ++G V+ G+ SL+ ++R
Sbjct: 114 SHQARASLATAYYMKVSDIDRLLVDLLVNQMGFTYVVGTGLGRKLSLINELQSVIERKEH 173
Query: 180 G-GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
G GP+ +S CPGWV YAEK+H +L IS KSPQQ+ G L+K+ A +L V IY
Sbjct: 174 GFQGPILSSICPGWVLYAEKTHPHVLL-RISDTKSPQQITGCLLKSLTAHQLEVERDQIY 232
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-----ELATTTLQEEK 293
H+++MPC+DKKLE++R + + L DVDCV+T EL LL L L
Sbjct: 233 HLSIMPCFDKKLESARPE-QDPLLVLNDVDCVLTPKELVTLLDECKDKFSLTFDALSHSS 291
Query: 294 DGILD---------WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFK- 343
+ D WP+ E + G G +L + P + F+
Sbjct: 292 GSLTDLYQSCAPANWPYVELSWSSDSGSLSGGYGYNYLQLLQLHLCLRDPQQYQPQNFRL 351
Query: 344 ---PLRNPDIREATFTCGDVTL-RFCIANGFRNIQNLIQKLK-----------------R 382
RN DI E D + I NGFRNIQNL++KLK +
Sbjct: 352 ESVAGRNKDIYELRLVYNDNQVASSAIVNGFRNIQNLVRKLKPTSSTTTTKTNPLVARRK 411
Query: 383 KRLPY------------------DFIEIMACPSGCLNGGAQI 406
RL D++EIMACP+GC+NGG QI
Sbjct: 412 ARLSSKRSESGAQDVQQADASKCDYVEIMACPNGCINGGGQI 453
>gi|330924151|ref|XP_003300539.1| hypothetical protein PTT_11788 [Pyrenophora teres f. teres 0-1]
gi|311325313|gb|EFQ91365.1| hypothetical protein PTT_11788 [Pyrenophora teres f. teres 0-1]
Length = 628
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 234/519 (45%), Gaps = 134/519 (25%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAY---IQETNGRE 59
S +L DL+DFI P CIKPI P+++ ++ AY +E
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPVQQ-----------TENTNAYEVTTEEKAAAS 49
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIREN----------------- 102
E ISLTDCLACSGC+TSAE+VL++ QSH EV+ + +
Sbjct: 50 EPPPPASISLTDCLACSGCVTSAEAVLVSLQSHTEVLSTLDTHPSLRAPWLAPNGDNGVV 109
Query: 103 NAHKASSNENT--------KTIVLSLAIQPVLSLGAKFALSHEQ---VVAKL-------- 143
N H ++ N K V S++ Q SL A F +S + ++++L
Sbjct: 110 NGHTSNGAPNGVNGHYAEGKLFVASVSPQARASLAAVFDVSEVEAGNMISQLLSGPSGLR 169
Query: 144 CGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF------------------LSGGGPLF 185
G ++ G V+D LV +E + P+
Sbjct: 170 SGGQQKSGFTWVIDTNAMREACLVAAADEVTKALAPEAVKASPKPGSEGAIDTTPKAPIL 229
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CPGW+CYAEK+H ++LP++SR+KSPQ + G+LIK+ L+E+ V PS I+H+ +MPC
Sbjct: 230 TSACPGWICYAEKTH-PYVLPHLSRLKSPQALTGTLIKSVLSERYNVPPSQIWHLAIMPC 288
Query: 246 YDKKLEASRADFYNE---------ELGYRDVDCVITAVELEVLLANE-----------LA 285
+DKKLEASR + + + RD DCVITA EL L A L
Sbjct: 289 FDKKLEASRGELTSAAWLPSHDSTQEKIRDTDCVITARELLHLAAARGINFASLPRASLP 348
Query: 286 TTTLQEEKDGILD---WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEF 342
+ D LD +P L SGGY +++L + PG S +V
Sbjct: 349 SADRTPFPDSKLDAFLFPPSRRKNQSAL---AGPSGGYLYHIL-QTYQAKNPGSSILVVR 404
Query: 343 KPLRNPDIREATFTCGDVTL----RFCIANGFRNIQNLIQKL---KRKRLP--------- 386
RN D+ E + T+ RF GFRNIQNL+++L K RLP
Sbjct: 405 G--RNADVVEYSVVRDSETIIKAARFY---GFRNIQNLVRRLKPAKASRLPGGKTGVSRR 459
Query: 387 --------------YDFIEIMACPSGCLNGGAQIRNEKV 411
Y ++E+MACP GC NGG Q++ ++V
Sbjct: 460 PGGVGAAAGEGVKDYAYVEVMACPGGCTNGGGQVKVQEV 498
>gi|344291276|ref|XP_003417362.1| PREDICTED: nuclear prelamin A recognition factor-like [Loxodonta
africana]
Length = 572
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 197/390 (50%), Gaps = 25/390 (6%)
Query: 94 EVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVD 153
+ M RE K ++E+ + + +S+ Q + AKF LS +LCGF K LGV
Sbjct: 26 DAMSPTREKE-EKCDTSEH-RVLAVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVR 83
Query: 154 LVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYI 208
V D IA FS++E + EF+ R+L P+ TS CPGWV YAE+ G P
Sbjct: 84 YVFDTTIAADFSILESQKEFVRRYLGHSEDKQALPMLTSACPGWVRYAERVLGTLCAPVP 143
Query: 209 SRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVD 268
+ S L+ L P I+HV + PCYDKKLEA R D + VD
Sbjct: 144 TGY--------SFRPISLSPNLS--PDGIFHVIVGPCYDKKLEALREDVQAASHTSQGVD 193
Query: 269 CVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSH 327
CV+T+ EL +++ +EL+ K+ +D + + + +G S GY +V H
Sbjct: 194 CVLTSGELLQIMEQSELSV------KEAAVDTLFGDLKEEEVRRHDGASSDGYLAHVFRH 247
Query: 328 AIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLP 386
A ++L + V + LRN D +E T G+V LRF GFRNIQN+I KLK+ + P
Sbjct: 248 AAKELFGEDVEKVTCRALRNKDFQEVTLEKEGEVVLRFAAVYGFRNIQNMILKLKKGKFP 307
Query: 387 YDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAW 446
Y F+E++ACP GCL+G Q + E K ++E I D+ P + ++ LY+ W
Sbjct: 308 YHFVEVLACPGGCLHGRGQAQAEDGHVDKALLRQMEGIYADIPVRPPETSEHVQMLYREW 367
Query: 447 LGGKSTDKGKHMLNTSYHNIPKNNIALNVK 476
L G + + L+TS+ + +L++K
Sbjct: 368 LHGADPPRVQEALHTSFPSAGLTASSLDIK 397
>gi|402901473|ref|XP_003913673.1| PREDICTED: nuclear prelamin A recognition factor-like [Papio
anubis]
Length = 328
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 169/299 (56%), Gaps = 8/299 (2%)
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
G L + PGWV YAE+ G I ++ KSPQQVMGSL+K + A + + P I+HV
Sbjct: 36 GWVLGPARAPGWVRYAERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHV 95
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDW 299
+ PCYDKKLEA + F G R DCV+T+ E+ +++ +L+ KD +D
Sbjct: 96 IVAPCYDKKLEALQEGFPPALHGSRGTDCVLTSGEIAQIMEQGDLSV------KDAAVDT 149
Query: 300 PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF-TCG 358
+ + ++ +G S G+ ++ HA ++L + V ++ LRN D +E T G
Sbjct: 150 LFGDLKEDKVTRHDGASSDGHLAHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNG 209
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+V LRF A GFRNIQN+I KLK+ + PY F+E++AC GCLNG Q + + K
Sbjct: 210 EVVLRFAAAYGFRNIQNMILKLKKGKFPYHFVEVLACAGGCLNGRGQAQTPDGHADKALL 269
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
++E I D+ P +A ++ LY+ WL G ++ K + +L+T+Y + + +L++KW
Sbjct: 270 RQMEGIYADIPVRRPESSAHMQELYQEWLEGINSPKAREVLHTTYQSQERGAHSLDIKW 328
>gi|396462406|ref|XP_003835814.1| similar to iron-sulfur cluster assembly associated protein Nar1
[Leptosphaeria maculans JN3]
gi|312212366|emb|CBX92449.1| similar to iron-sulfur cluster assembly associated protein Nar1
[Leptosphaeria maculans JN3]
Length = 632
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 162/504 (32%), Positives = 226/504 (44%), Gaps = 116/504 (23%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PI--EKPSGPRTGAKIRIQDDGAYIQETNGREE 60
S +L DL+DFI P CIKPI P+ E S P +E +
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPVQAEDSSNPYE----------VTTEEKAAAAQ 50
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNA-------HKASSNEN- 112
ISLTDCLACSGC+TSAE+VL++ QSH EV+ + + H ++ N
Sbjct: 51 PPPPASISLTDCLACSGCVTSAEAVLVSLQSHSEVLTTLDTYRSLRAPWMTHNGTNGTNG 110
Query: 113 -----------TKTIVLSLAIQPVLSLGAKFALSHEQ---VVAKL--------CGFFKRL 150
K V S++ Q SL A F ++ + ++ +L G +R
Sbjct: 111 THGMTNGHGVEEKLFVASVSPQARASLAAVFNITEAEAGNLITQLLSGPSGLRSGGHQRS 170
Query: 151 GVDLVLDVGIAHCFSLVELENEFL-----------DRFLSGGG-------PLFTSECPGW 192
V+D LV +E R S G P+ TS CPGW
Sbjct: 171 DFTWVIDTNSVREACLVAAADEVAHALSPEALNAPTRPGSEGAIDTTPKQPILTSACPGW 230
Query: 193 VCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEA 252
+CYAEK+H ++LP++SR+KSPQ + G+L+K+ L+++ V PS I+H+ +MPC+DKKLEA
Sbjct: 231 ICYAEKTH-PYLLPHLSRLKSPQALTGTLLKSVLSQRYNVAPSQIWHLAIMPCFDKKLEA 289
Query: 253 SRADFYNEEL--GY-------RDVDCVITAVE-----------LEVLLANELATTTLQEE 292
SR++ + GY RDVDCVITA E L L LA
Sbjct: 290 SRSELTSASWLPGYEASQDKVRDVDCVITAREVLHLAAARGINLASLPKTPLAPADRTPF 349
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE 352
D LD + + SGGY +++L + PG + + RN D+ E
Sbjct: 350 PDPKLDTFLFPPSHRKNQPAAAGSSGGYLYHIL-QTYQARHPGSTLTISRG--RNADVVE 406
Query: 353 ATFTCG-DVTLRFCIANGFRNIQNLIQKLK---RKRLP---------------------- 386
G + +R GFRNIQNL++KLK RLP
Sbjct: 407 YAVMQGPQILIRAARFYGFRNIQNLVRKLKPARASRLPGARTGVVRRPPGAAAAASARED 466
Query: 387 ---YDFIEIMACPSGCLNGGAQIR 407
Y ++E+MACP GC NGG QI+
Sbjct: 467 VGQYAYVEVMACPGGCTNGGGQIK 490
>gi|189189516|ref|XP_001931097.1| LET1-like protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972703|gb|EDU40202.1| LET1-like protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 629
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 235/520 (45%), Gaps = 136/520 (26%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAY---IQETNGRE 59
S +L DL+DFI P CIKPI P+++ ++ AY +E
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETIPVQQ-----------TENANAYEVTTEEKAAAS 49
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMK--------------------VI 99
E ISLTDCLACSGC+TSAE+VL++ QSH EV+ V+
Sbjct: 50 EPPPPASISLTDCLACSGCVTSAEAVLVSLQSHTEVLSTLDTHPSLRAPWLAPSGNNGVV 109
Query: 100 RENNAHKAS-----SNENTKTIVLSLAIQPVLSLGAKFALSH-------EQVVAKLCGFF 147
N + A+ S+ K V S++ Q SL A F +S Q+++ G
Sbjct: 110 NGNTTNGATNGVKGSHAEGKLFVASVSPQARASLAAVFNVSEAEAGNMISQLLSGPSGLR 169
Query: 148 K--RLGVDL--VLDVGIAHCFSLVELENEFLDRF------------------LSGGGPLF 185
+ G D V+D LV +E ++ P+
Sbjct: 170 DGGQQGSDFIWVIDTNAMREACLVAAADEVTKALALEAAKASPKPGSEGAIDITPKAPIL 229
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CPGW+CYAEK+H ++LP++SR+KSPQ + G+LIK+ L+E+ V PS I+H+ +MPC
Sbjct: 230 TSACPGWICYAEKTH-PYVLPHLSRLKSPQALTGTLIKSVLSERYNVPPSQIWHLAIMPC 288
Query: 246 YDKKLEASRADFYNE---------ELGYRDVDCVITAVELEVLLANE------LATTTL- 289
+DKKLEASR + + + RD DCVITA EL L A L T+L
Sbjct: 289 FDKKLEASRGELTSAAWLPSHDSTQEKIRDTDCVITARELLHLAAARGINFASLPRTSLP 348
Query: 290 --------QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVE 341
+ D L P N + SGGY +++L + PG + +
Sbjct: 349 SADRTPFPDSKLDAFLFPPSRRKNQSAL----AGPSGGYLYHIL-QTYQAQNPGST--IS 401
Query: 342 FKPLRNPDIREATFTCGDVTL----RFCIANGFRNIQNLIQKL---KRKRLP-------- 386
RN D+ E + T+ RF GFRNIQNL+++L K RLP
Sbjct: 402 VARGRNADVVEYSVVRDSETIIKAARFY---GFRNIQNLVRRLKPAKASRLPGGKTGVSR 458
Query: 387 ---------------YDFIEIMACPSGCLNGGAQIRNEKV 411
Y ++E+MACP GC NGG Q++ ++V
Sbjct: 459 RPGGAGAAIGEGVKNYAYVEVMACPGGCTNGGGQVKVQEV 498
>gi|340507726|gb|EGR33647.1| nuclear prelamin A recognition factor, putative [Ichthyophthirius
multifiliis]
Length = 429
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 242/494 (48%), Gaps = 88/494 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
FS +++T+LDD+I PSQ+CI P ++K + IQD I ++ + K
Sbjct: 2 FSSTIKITNLDDYIAPSQDCILPF-MDKNQKLQN-----IQDKQPIINKSQNQTAK---- 51
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L+DCLACSGC+T+AES+L QQS +E + + ++ K V+S++ Q
Sbjct: 52 -ITLSDCLACSGCVTTAESILQQQQSVDEFI-----------NKSQTFKHTVISISPQSR 99
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPLF 185
+SL F + + L FF + + + V L P+
Sbjct: 100 VSLAYHFGVDEFYIQKALTKFF------------LQNYNTKVSL-------------PII 134
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TSECPGW YAEK+ GEFI+ ++S++KSPQQ+MG L+K A+KLG + I VT+MPC
Sbjct: 135 TSECPGWTLYAEKAVGEFIIKHMSQIKSPQQLMGCLVKDLFAQKLGYNNQDILFVTIMPC 194
Query: 246 YDKKLEASRADFYNEELGYRDVDCVI-TAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
YDKK+E++R DF + ++ I T + + + + + ++ D +L
Sbjct: 195 YDKKVESARRDFEKNQFNELYINPNIETYLMHDEYIQQQQQQSQQNQDTDFLLK------ 248
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHA---IRQLCPGESPVVEFKPLRNPD--IREATFTC-- 357
+L GS Y ++ A + QL P + ++ K +N D ++ FT
Sbjct: 249 -----VLEYSNGSNDYLDYIIRRAAFDLFQLLPDQYQ-IQNKQGKNTDFNVKYIIFTYII 302
Query: 358 ----------GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
G L F G RNIQN+ + +K + + +IEI+ACPSGCLNGG Q++
Sbjct: 303 LFQEIFIQYNGQKILNFARIYGLRNIQNITRNIKMNKCQFQYIEILACPSGCLNGGGQLK 362
Query: 408 NEKVASPKETALELETILCDLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ + K+ AL + +C+L + + N ++++Y+ L D+ +
Sbjct: 363 SLD-ENIKQKALIDK--MCELLNKKKVVNKQNNLAVKYVYQDLLK----DRYSIYFKIIF 415
Query: 464 HNIPKNNIALNVKW 477
+I K N ++ W
Sbjct: 416 KHIEKLNTQSSLNW 429
>gi|340923959|gb|EGS18862.1| ferredoxin hydrogenase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 609
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 175/559 (31%), Positives = 262/559 (46%), Gaps = 124/559 (22%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKK- 64
S +L DL+DFI P CIKPI E P+ A + + +G++ + +
Sbjct: 1 MSAILSADDLNDFISPGVACIKPI--ETIPAPQQDATTSSSEPEVIL---DGQQPQPRAP 55
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAH-------------KASSNE 111
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ V+ A + N
Sbjct: 56 AQISLTDCLACSGCVTSAEAVLVSLQSHAEVLSVLDAAPALELVYDKQSGSVGVRGLENP 115
Query: 112 NTKTIVLSLAIQPVLSLGAKFALSH---EQVVAKLCGF-----------------FKRLG 151
++K ++ S++ Q SL A +L H ++V + G+ FK G
Sbjct: 116 DSKLLIASVSPQTRASLAAAASLGHHAGKRVTDQQAGWMIEHLFRGERGLRQGGKFKN-G 174
Query: 152 VDLVLDVGIAHCFSLVELENEFLDRFLSGG-------GPLFTSECPGWVCYAEKSHGEFI 204
++D A L+ +E LD+ S P+ T+ CPGWVCYAEK+H +
Sbjct: 175 FTWIVDTNAAREACLLLGADEVLDQQGSAATNTGKVIAPVLTASCPGWVCYAEKTH-PHV 233
Query: 205 LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELG- 263
LP++SRVKSPQ + G+L+KT L+ LG+ PS I+H+ +MPC+DKKLEASR + + G
Sbjct: 234 LPHLSRVKSPQALTGTLLKTTLSRILGIPPSRIWHLAIMPCFDKKLEASREELTDAVWGN 293
Query: 264 -------------------YRDVDCVITAVELEVLLAN------ELATTTLQEEKDGILD 298
RDVDCVIT+ E+ +L A+ ++ + E+ D
Sbjct: 294 NSTAMDFTTGGIGKSKGKGARDVDCVITSKEILMLAASRDLDFFDMPRSAPPSEQPAFPD 353
Query: 299 -----WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
+ + + HR + SGG +L H I+ PG ++ RN D+ E
Sbjct: 354 PIIHRFLFPSSSRHRKQPRDAGTSGGNLFFIL-HTIQSRHPGSQ--IQTTRGRNADVVEF 410
Query: 354 TF---TCGDVTLRFCIANGFRNIQNLIQKL---KRKRLP--------------------- 386
+ + G++ R GFRNIQNL++KL K R+P
Sbjct: 411 SVVQPSSGEILFRAARYYGFRNIQNLVRKLKPAKASRMPGGKPFGSARRPTLGVAGSRSA 470
Query: 387 ----YDFIEIMACPSGCLNGGAQIR-NEKVASPKETALELETILCDLAKSEPREN-ATLE 440
Y ++E+MACP GC NGG QI+ +++V +E E K P+E A L
Sbjct: 471 TGLDYGYVEVMACPGGCTNGGGQIKVDDQVIVDREIFGE---------KPGPQEQKAWLA 521
Query: 441 HLYKAWLGGKSTDKGKHML 459
+ +A+ D G L
Sbjct: 522 EVDEAYFSADEPDNGASGL 540
>gi|171687247|ref|XP_001908564.1| hypothetical protein [Podospora anserina S mat+]
gi|170943585|emb|CAP69237.1| unnamed protein product [Podospora anserina S mat+]
Length = 591
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 154/484 (31%), Positives = 224/484 (46%), Gaps = 89/484 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKPI P+ P A ++ + + +
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIET-LPTAPPPQASESLEFEVILDGQQPSASQPAGPA 59
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKAS-----------SNENTK 114
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ ++ + S N ++K
Sbjct: 60 QISLTDCLACSGCVTSAEAVLVSLQSHNEVLSLLDSAPSLALSQDGTTITTNLDGNPSSK 119
Query: 115 TIVLSLAIQPVLSLGAKFALSHEQVVAK--------------LCGFFKRLGVDLVLDVGI 160
V S++ Q + SL A + Q A G G ++
Sbjct: 120 LFVCSVSPQVLASLAAAIGNNTTQSQAANMITHLLSNPSLGLPSGGRHNNGFTYIVPTNR 179
Query: 161 AHCFSLVELENEFLDRFLSG-GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMG 219
A SLV +E + + P+ TS CPGWVCYAEK+H ++LPY+S+VKSPQ + G
Sbjct: 180 AREASLVLGADEVISSSSNDIKKPVLTSSCPGWVCYAEKTH-PYVLPYLSKVKSPQALTG 238
Query: 220 SLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE--------------ELGYR 265
+L+KT L++ L + P I+H+++MPC+DKKLEASR + + + G R
Sbjct: 239 TLLKTTLSKTLNISPDRIWHLSIMPCFDKKLEASREELTDAVWNNTSNNPATTATQKGIR 298
Query: 266 DVDCVITAVELEVLLANELATTTLQEEK---------------DGILDWPWDEHNPHRML 310
DVDCVIT E+ ++LA D +L + +
Sbjct: 299 DVDCVITTKEI-LMLAESRNINFFSLPTTPLPQTTPFPHKAMGDFLLPFSAPGKKNEQQS 357
Query: 311 LVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF--TCGDVTLRFCIAN 368
L GT SGG H +L H + PG + RN D+ E + + G+ +
Sbjct: 358 LSAGT-SGGNLHYIL-HTLLSQNPGSTLTTTRG--RNADVIEYSILSSSGEQIFKAARYY 413
Query: 369 GFRNIQNLIQKLKRKRLP-------------------------YDFIEIMACPSGCLNGG 403
GFRNIQNL++KLK R P + ++E+MACP GC NGG
Sbjct: 414 GFRNIQNLVRKLKPARPPRMPGGKPFGSARRPGKAAGATNALDFSYVEVMACPGGCTNGG 473
Query: 404 AQIR 407
Q++
Sbjct: 474 GQLK 477
>gi|301103566|ref|XP_002900869.1| nuclear prelamin A recognition factor-like protein [Phytophthora
infestans T30-4]
gi|262101624|gb|EEY59676.1| nuclear prelamin A recognition factor-like protein [Phytophthora
infestans T30-4]
Length = 380
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 188/377 (49%), Gaps = 70/377 (18%)
Query: 12 LTDLDDFIGPSQECIKPIPIEKPS---GPRTG-AKIRIQD-----DGAYIQETNG---RE 59
L DL+D+I PSQ C+ P+ S G G AKI ++ D A Q R
Sbjct: 6 LGDLNDYIQPSQACVNPLFTSDKSESNGSSNGLAKITLETELSAADFAVPQPVKPNIIRT 65
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLS 119
+K ISL DCLACSGC+TSAE+VLI+QQS +E++ V+ + + K +V++
Sbjct: 66 TTQEKATISLDDCLACSGCVTSAETVLISQQSFKEMLDVL---------ATKEHKRVVVT 116
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
L+ Q SL A F + V KL F+ LGV LV+D + F+L+E EFL R+ +
Sbjct: 117 LSPQSRASLAAHFEMPVVAVHRKLVTLFRNLGVTLVIDSTCSGDFALLESRAEFLHRYRN 176
Query: 180 ------------------------------------GGGPLFTSECPGWVCYAEKSHGEF 203
P+ S CPGW+CYAEKS
Sbjct: 177 HQKTIWARPPSSVAVSSAKTEFLEPSTTANPLQDPLRAMPMLASSCPGWICYAEKSQPNA 236
Query: 204 ILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELG 263
I P+I KSPQQ+ GS+IK ++ + GV PS +YHV +MPC+DKKLEASR DF + E
Sbjct: 237 I-PFIDTTKSPQQIAGSIIKRFVSGEHGVKPSEVYHVAVMPCFDKKLEASRKDFQDAEDA 295
Query: 264 YRDVDCVITAVELEVLLAN--------ELATTTLQEEKDGILDWPWDEHNPHRMLLVNGT 315
+DVDCV+ E+ L+ + ELAT T +E ++ E +
Sbjct: 296 TKDVDCVLATTEIIELIESLNVDFASLELATLTPEE----VMLSGVSEDGSSVLGSSQNA 351
Query: 316 GSGGYAHNVLSHAIRQL 332
SGG+ ++ +A ++L
Sbjct: 352 SSGGHLEHIFRYAAKEL 368
>gi|405972741|gb|EKC37491.1| Cytosolic Fe-S cluster assembly factor narfl [Crassostrea gigas]
Length = 261
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 151/261 (57%), Gaps = 1/261 (0%)
Query: 218 MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELE 277
MGSL+K + A K G P IYHVT+MPCYDKKLEASR DFY++ RDVDCVIT E+E
Sbjct: 1 MGSLVKDYFAAKQGQTPDQIYHVTVMPCYDKKLEASRQDFYSDLYRTRDVDCVITTGEVE 60
Query: 278 VLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGES 337
+L E T E + G GSGGY +V+ +A+ Q+
Sbjct: 61 KMLEKENVTLGQVEGNTAYCVLSGFGSPDGGLGSHLGGGSGGYLEHVMRYAVSQIHGSSV 120
Query: 338 PVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
+++K LRN D +E T G L+ +A GFRNIQN++QK+KR ++ YDF+EIMACP
Sbjct: 121 DSLQYKTLRNQDFQEVTVEIEGKRPLKMALAYGFRNIQNIVQKIKRGKMTYDFVEIMACP 180
Query: 397 SGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGK 456
SGC NGG QIR + + E ++ + +P ++ +Y+ WLGG T+K +
Sbjct: 181 SGCANGGGQIRPMEGQTNNELLQRVKESYDSVPCVQPDLWPGVKDIYEEWLGGVDTEKAR 240
Query: 457 HMLNTSYHNIPKNNIALNVKW 477
ML+T YH + K ALN++W
Sbjct: 241 AMLHTQYHGVEKVASALNIQW 261
>gi|325089799|gb|EGC43109.1| iron-sulfur cluster assembly protein [Ajellomyces capsulatus H88]
Length = 632
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 240/510 (47%), Gaps = 118/510 (23%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKPI S PR K +D +E + V
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIE----SLPRKADK-NSKDVYEVAREDKIEPDNPPSV 55
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKV--------------------IRENNAH 105
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ +REN+A
Sbjct: 56 QISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDSCAELRIDELNGCSNAQRLRENDAG 115
Query: 106 KASSNENTKT------IVLSLAIQPVLSLGAKFALSH-------EQVVA-----KLCGFF 147
++ E T V S++ Q SL A + +S EQ ++ + G +
Sbjct: 116 FSAEGEQRTTESGGKIFVASVSPQARASLAATYGISEREAGYLIEQFLSGPEGLRAGGAY 175
Query: 148 KRLGVDLVLDVGIAH--CF---------SLVELENEFLDRFLSGGGPLFTSECPGWVCYA 196
G V+D + C SL ++ ++ F + P+ +S CPGW+CYA
Sbjct: 176 GN-GFTWVVDTNVMRQVCLELSVSEVTESLNSSKDTLIETFPAPKRPVLSSACPGWICYA 234
Query: 197 EKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD 256
EK+H +LP+ISR+KSPQ + G+L+KT L++ L + S I+H+ +MPC+DKKLEASR +
Sbjct: 235 EKTH-PHVLPHISRLKSPQALTGTLLKTLLSKALNISSSQIWHLAIMPCFDKKLEASRQE 293
Query: 257 FYNE---------ELGY---------RDVDCVITAVELEVLLANE---LATTTLQE-EKD 294
+ + G+ RDVDCVIT+ EL +L + L LQ
Sbjct: 294 LTDASWQDASSMTQKGHSPTESYSPVRDVDCVITSRELLMLATSRNISLRNLPLQPLPSP 353
Query: 295 GILDWPWDEHNP------HRMLLVNGTG-SGGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
+ +P P + + + G SGGY +++L+ + PG ++ + RN
Sbjct: 354 SVPLFPDPYFAPFLFPKSSQFVQPSAAGTSGGYLYHILT-TYQHRNPGSQ--IQTQRGRN 410
Query: 348 PDIREATFT--CGDVTLRFCIANGFRNIQNLIQKLK---RKRLP---------------- 386
D+ E G ++ GFRNIQNL++KLK RLP
Sbjct: 411 SDVIEYALISPSGATIIKAARYYGFRNIQNLVRKLKPPRASRLPGANPMIGRRAGGGCAA 470
Query: 387 ---------YDFIEIMACPSGCLNGGAQIR 407
Y +IE+MACP GC NGG QIR
Sbjct: 471 TVSSTSATDYAYIEVMACPGGCTNGGGQIR 500
>gi|407926563|gb|EKG19530.1| Iron hydrogenase large subunit [Macrophomina phaseolina MS6]
Length = 654
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 155/504 (30%), Positives = 227/504 (45%), Gaps = 116/504 (23%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPI-----EKPSGPRTGAKIRIQDDGAYIQETNGREE 60
S +L DL+DFI P CIKPI E S P ++ +D A
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETIPANSEDASNPY---EVTTEDKVA--------AS 49
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVI--------------RENNAHK 106
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + N +
Sbjct: 50 NPPPAQISLTDCLACSGCVTSAEAVLVSLQSHTEVLNTLDSYAELTPPWLAKEHANGTYN 109
Query: 107 A------SSNENTKTIVLSLAIQPVLSLGAKFALSH-------EQVVAKLCGFFKR---- 149
++ K V S++ Q S+ A + S EQ+++ G
Sbjct: 110 GLSGGLNGTSGEGKIFVASVSPQARASIAATYGTSEREAGYMIEQLLSGPQGVRSGGPHG 169
Query: 150 LGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGP---------------LFTSECPGWVC 194
G ++D +LV +E + + P + TS CPGW+C
Sbjct: 170 SGFTWIIDTNTVREAALVLAADEVVSALSNPSTPAPGEEGSASVVPKKPILTSACPGWIC 229
Query: 195 YAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASR 254
YAEK+H ++LP++SR KSPQ + G+LIK+ L K G+ P ++H+ +MPC+DKKLEASR
Sbjct: 230 YAEKTH-PYVLPHLSRTKSPQALAGTLIKSVLYRKYGIPPDKVWHLAVMPCFDKKLEASR 288
Query: 255 ADFYNEELG-------YRDVDCVITAVELEVLL-ANELATTTL------QEEKDGILDWP 300
++ + RDVDCVITA EL +L + ++ +L + ++ D
Sbjct: 289 SELTSSAWLPSSSSDPVRDVDCVITARELLMLAQSRDIHFPSLPGKPLPRSQRPRFPDRA 348
Query: 301 WDE--HNPHRMLLV-NGTGSGGYAHNVLSHAIRQLC---PGESPVVEFKPLRNPDIREAT 354
D +P R V NG G + L H ++ PG + VE RN D+ E
Sbjct: 349 LDAFLFSPRRRPGVRNGDAVAGSSGGYLYHIMQTFAAQHPGSTLHVERG--RNADVVEYL 406
Query: 355 FT--CGDVTLRFCIANGFRNIQNLIQKLK---RKRLP----------------------- 386
G+ ++ GFRNIQNL+++LK R+P
Sbjct: 407 LKGEGGNTLVKTARFYGFRNIQNLVRRLKPARASRMPGARTGVARRPGGVAAAAKAGGGA 466
Query: 387 ---YDFIEIMACPSGCLNGGAQIR 407
Y ++E+MACP GC NGG QI+
Sbjct: 467 DAEYAYVEVMACPGGCTNGGGQIK 490
>gi|255719234|ref|XP_002555897.1| KLTH0H00396p [Lachancea thermotolerans]
gi|238941863|emb|CAR30035.1| KLTH0H00396p [Lachancea thermotolerans CBS 6340]
Length = 463
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 236/493 (47%), Gaps = 97/493 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI-PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKK 64
S +L DL+DFI P C+KP PIEK G + + + +E+N + K
Sbjct: 1 MSSLLSEKDLNDFISPGLACVKPAEPIEK--GEKQEGDLEVG------KESN----DMGK 48
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
V ISL DCLACSGCITS+E +L++QQSH ++ + N A + +V+S+ Q
Sbjct: 49 VSISLQDCLACSGCITSSEEILLSQQSHTVFLEAWK-NLARDTA-------LVVSIPPQC 100
Query: 125 VLSLGAKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLVELENEFLDR--FLSGG 181
LSL + +S E K + G ++ I ++ + +R S
Sbjct: 101 RLSLAHYYDMSLESFDKSFLTLMKEKFGARYIVGTQIGRNITVNQTNKLLTERKSLSSSK 160
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P + CPG+V YAEK+ E + PY+ VKSPQQ+ G+L+K + +IYH+T
Sbjct: 161 KPALCAVCPGFVLYAEKTKPELV-PYLLDVKSPQQITGALLKKAIP--------NIYHLT 211
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA-NELATTTLQEEKDGIL--- 297
+MPC+DKKLEASR D G +VDCVIT E +L +L T D +
Sbjct: 212 IMPCFDKKLEASRKD------GEGEVDCVITPREFATMLQEQDLKLTDFLTSTDETVLKQ 265
Query: 298 -----DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIRE 352
W H G+ SGGYA+ + H + L PG + +N D++E
Sbjct: 266 SCSPPGWDISVHWASN----EGSASGGYAYQYILHQ-KSLHPGS--CISTITGKNSDLKE 318
Query: 353 ATFTCGDVTLRFCIAN-----GFRNIQNLIQKLK------------RKRLPY-------- 387
F DV+ IA+ GFRNIQN+++KL RKR
Sbjct: 319 --FRLMDVSNENVIASSSELYGFRNIQNMVRKLTSSGSASRNIKVLRKRATTSSNNGSSF 376
Query: 388 ---------DFIEIMACPSGCLNGGAQIRNEKVASPKET---ALELE--TILCDLAKSE- 432
DFIE+MACP GC+NGG + E +S + +LELE ++ ++ S+
Sbjct: 377 GSAVDPSKTDFIEVMACPGGCINGGGLLNGEANSSRRRALAKSLELEYGKVIPKVSCSDH 436
Query: 433 PRENATLEHLYKA 445
PR+++T ++ + A
Sbjct: 437 PRDDSTYKYKFSA 449
>gi|345570856|gb|EGX53675.1| hypothetical protein AOL_s00006g65 [Arthrobotrys oligospora ATCC
24927]
Length = 592
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 170/531 (32%), Positives = 246/531 (46%), Gaps = 113/531 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPI--EKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
S +L DL+DFI P CIKP+ PS P ++ +D + E KL+
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPAAPSEPSNPYEVTTED------KVTATEAKLQ 54
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASS-------------- 109
+ISLTDCLACSGC+TSAE+VL++ QSH+EV+ V+ ++ S
Sbjct: 55 AAQISLTDCLACSGCVTSAEAVLVSLQSHQEVLTVLDSEDSCSVGSLNGSLQHVGAGEDA 114
Query: 110 ---NENTKTIVLSLAIQPVLSLGAKFALSHEQV--------VAKLCGFFKRLGVDLVLDV 158
N+ + V S++ Q SL A S ++ + + KR G D VLD
Sbjct: 115 TVPNKRKRIFVASVSPQTRASLAAAMGRSTNEIGHMIDRLLLESISSNGKR-GFDYVLDT 173
Query: 159 G--IAHCFSLV--ELENEFLDRF-LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
++ C L EL + +R + P+ TSECPG+VCY EK+H +LP++SR+KS
Sbjct: 174 APFLSVCLHLAAQELADSLANRSEKTPKLPILTSECPGFVCYLEKTH-PAVLPHLSRLKS 232
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRA--------DFYNEELGYR 265
PQ ++G+L+K+ L +G +YHV +MPC+DKKLEASRA D + R
Sbjct: 233 PQALLGTLLKSLLPRYIG-DDIDVYHVAVMPCFDKKLEASRAELTDATWKDVDQDITPTR 291
Query: 266 DVDCVITAVELEVLLAN--ELATTTLQEEK------------DGILDWPWDEHNPHRMLL 311
DVDCVIT EL + LA+ ++ +TL + L + + + L
Sbjct: 292 DVDCVITTREL-LQLADFRDVDFSTLSPKALPNKMLPPIPALQTFLLGARNLKDEQSLGL 350
Query: 312 VNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGD---VTLRFCIAN 368
GT SGGY +++ Q S ++E K RN D+ E D L+
Sbjct: 351 QVGT-SGGYLVSIMQEL--QSKHTGSKIIE-KKGRNSDVMEFILLSADGETEILKMARFY 406
Query: 369 GFRNIQNLIQKLKRKRL-------------------------------PYDFIEIMACPS 397
GFRNIQNL++KLK +L Y + E+MACP
Sbjct: 407 GFRNIQNLVRKLKPAKLRMLPGGAARKVVGKTARAPTARAGTSSSVGSEYCYAEVMACPG 466
Query: 398 GCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLG 448
GC NGG Q++ + I+ +A++ L KAWLG
Sbjct: 467 GCTNGGGQLK-----------FDDSFIVDSVAQATANAAVVLRSEAKAWLG 506
>gi|240276342|gb|EER39854.1| nuclear prelamin [Ajellomyces capsulatus H143]
Length = 604
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 150/464 (32%), Positives = 223/464 (48%), Gaps = 118/464 (25%)
Query: 57 GREEKLK-----KVEISLTDCLACSGCITSAESVLITQQSHEEVMKV------------- 98
RE+K++ V+ISLTDCLACSGC+TSAE+VL++ QSH EV+
Sbjct: 14 AREDKIEPDNPPSVQISLTDCLACSGCVTSAEAVLVSLQSHAEVLNTLDSCAELRIDELN 73
Query: 99 -------IRENNAHKASSNENTKT------IVLSLAIQPVLSLGAKFALSH-------EQ 138
+REN+A ++ E T V S++ Q SL A + +S EQ
Sbjct: 74 GCSNAQRLRENDAGFSAEGEQRTTESGGKIFVASVSPQARASLAATYGISEREAGYLIEQ 133
Query: 139 VVA-----KLCGFFKRLGVDLVLDVGIAH--CF---------SLVELENEFLDRFLSGGG 182
++ + G + G V+D + C SL ++ ++ F +
Sbjct: 134 FLSGPEGLRAGGAYGN-GFTWVVDTNVMRQVCLELSVSEVTESLNSSKDTLIETFPAPKR 192
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ +S CPGW+CYAEK+H +LP+ISR+KSPQ + G+L+KT L++ L + S I+H+++
Sbjct: 193 PVLSSACPGWICYAEKTH-PHVLPHISRLKSPQAITGTLLKTVLSKALNISSSQIWHLSI 251
Query: 243 MPCYDKKLEASRADFYNE---------ELGY---------RDVDCVITAVELEVLLANE- 283
MPC+DKKLEASR + + + G+ RDVDCVIT+ EL +L +
Sbjct: 252 MPCFDKKLEASRQELTDASWQDASSMTQKGHSTTESYSPVRDVDCVITSRELLMLATSRN 311
Query: 284 --LATTTLQE-EKDGILDWPWDEHNP------HRMLLVNGTG-SGGYAHNVLSHAIRQLC 333
L LQ + +P P + + + G SGGY +++L+ +
Sbjct: 312 ISLRNLPLQPLPSPSVPLFPDPYFAPFLFPKSSQFVQPSAAGTSGGYLYHILT-TYQHRN 370
Query: 334 PGESPVVEFKPLRNPDIREATFT--CGDVTLRFCIANGFRNIQNLIQKLK---RKRLP-- 386
PG ++ + RN D+ E G ++ GFRNIQNL++KLK RLP
Sbjct: 371 PGSQ--IQTQRGRNSDVIEYALISPSGATIIKAARYYGFRNIQNLVRKLKPPRASRLPGA 428
Query: 387 -----------------------YDFIEIMACPSGCLNGGAQIR 407
Y +IE+MACP GC NGG QIR
Sbjct: 429 NPMIGRRAGGGCAATVSSTSATDYAYIEVMACPGGCTNGGGQIR 472
>gi|342184637|emb|CCC94119.1| putative iron-containing hydrogenase [Trypanosoma congolense
IL3000]
Length = 476
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 149/440 (33%), Positives = 218/440 (49%), Gaps = 74/440 (16%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M+++ FS L L +D +I PS+ CI P ++ G G+ + + +E
Sbjct: 1 MSANSFSASLMLAGMD-YIAPSEACILPTQMQNAVG----------SSGSITRHNSTKE- 48
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
V+I+L DCLACSGC+T+AE++LIT QS +E++ RE +A E T+ ++S+
Sbjct: 49 ---AVKITLQDCLACSGCVTTAETILITSQSRDELL---RERSA------EPTRPFLVSI 96
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLD--RF 177
+ Q S+ A + ++ + GFF+ L V+D+ A S + E+ R+
Sbjct: 97 SDQSAASIAAFLGIDIQRTFRLISGFFRTVLDARYVVDLRWALRISAEKTAEEYCRRMRY 156
Query: 178 LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
PL S CPGWVCY EK G +L + V SPQ + GS K + P I
Sbjct: 157 ERDRLPLIVSACPGWVCYCEK-QGSAVLSLLCPVLSPQGIAGSYTKR-------IVPG-I 207
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGI 296
HV++ PC+D+KLEA+R + + G R D V++ E LE +L E+D
Sbjct: 208 CHVSVQPCFDRKLEAARD--VSGDTGERYTDFVLSTQELLEWML-----------EQDAS 254
Query: 297 LDW--PWDEH----------NPHRMLLVNGTGSGGYAHNVLSHAIRQL-----CPGESPV 339
L W P D + L N GSGGY + HA R+L P +
Sbjct: 255 LPWAAPLDSYLEPLPPLPPQEADGCLAANMEGSGGYHRLAMHHAARELHNVVISPCD--- 311
Query: 340 VEFKPLRNPDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRK---RLPYDFIEIMACP 396
+ ++ RN + + AT + G+ FC+A GF+ IQN ++ LKRK PY FIE+MACP
Sbjct: 312 IRYEMKRNINHQLAT-SHGNPGEVFCVAYGFQQIQNTVRGLKRKLSSMTPYTFIELMACP 370
Query: 397 SGCLNGGAQIRNEKVASPKE 416
GCLNGG Q R S E
Sbjct: 371 EGCLNGGGQARGNTDVSRGE 390
>gi|259149127|emb|CAY82369.1| Nar1p [Saccharomyces cerevisiae EC1118]
gi|365763474|gb|EHN05002.1| Nar1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 230/456 (50%), Gaps = 83/456 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L +DL+DFI P+ C+KP + SG G K + +G Y E + ++L+KV
Sbjct: 1 MSALLSESDLNDFISPALACVKPTQV---SG---GKKDNVNMNGEY--EVSTEPDQLEKV 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L+DCLACSGCITS+E +L++ QSH +K N K S ++ K +V+S++ Q
Sbjct: 53 SITLSDCLACSGCITSSEEILLSSQSHSVFLK-----NWGKLSQQQD-KFLVVSVSPQCR 106
Query: 126 LSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCFSLV-----ELENEF 173
LSL + L+ E L FF++ +G ++ + I+ + + EN
Sbjct: 107 LSLAQYYGLTLEAADLCLMNFFQKHFQCKYMVGTEMGRIISISKTVEKIIAHKKQKENTG 166
Query: 174 LDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
DR PL ++ CPG++ Y EK+ + + P + VKSPQQ+ GSLI+ E L +
Sbjct: 167 ADR-----KPLLSAVCPGFLIYTEKTKPQ-LAPMLLNVKSPQQITGSLIRATF-ESLAIA 219
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA--NELATTTLQE 291
YH++LMPC+DKKLEASR + ++ +DCVIT E+ +L N + L E
Sbjct: 220 RESFYHLSLMPCFDKKLEASRPESLDD-----GIDCVITPREIVTMLQELNLDFKSFLTE 274
Query: 292 EKD--GILDWP-WDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
+ G L P WD P N G+ GGYA+ ++ A+++L PG +V RN
Sbjct: 275 DTSLYGRLSPPGWD---PRVHWASNLGGTCGGYAYQYVT-AVQRLHPGSQMIVLEG--RN 328
Query: 348 PDIREATFTCGDVTLRFCIA-NGFRNIQNLIQKLK--------------RKRL------- 385
DI E D + +GFRNIQNL++KL RKR
Sbjct: 329 SDIVEYRLLHDDRIIAAASELSGFRNIQNLVRKLTSGSGSERKRNITALRKRRTGPKANS 388
Query: 386 ---------PY--DFIEIMACPSGCLNGGAQIRNEK 410
PY D+IE+ ACP C+NGG + E+
Sbjct: 389 REMAAATADPYHSDYIEVNACPGACMNGGGLLNGEQ 424
>gi|6324089|ref|NP_014159.1| Nar1p [Saccharomyces cerevisiae S288c]
gi|1730836|sp|P23503.2|NAR1_YEAST RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|1183974|emb|CAA93358.1| N1114 [Saccharomyces cerevisiae]
gi|1302274|emb|CAA96145.1| unnamed protein product [Saccharomyces cerevisiae]
gi|51013435|gb|AAT93011.1| YNL240C [Saccharomyces cerevisiae]
gi|207341882|gb|EDZ69818.1| YNL240Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272369|gb|EEU07352.1| Nar1p [Saccharomyces cerevisiae JAY291]
gi|285814425|tpg|DAA10319.1| TPA: Nar1p [Saccharomyces cerevisiae S288c]
Length = 491
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 230/459 (50%), Gaps = 86/459 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L +DL+DFI P+ C+KP + SG G K + +G Y E + ++L+KV
Sbjct: 1 MSALLSESDLNDFISPALACVKPTQV---SG---GKKDNVNMNGEY--EVSTEPDQLEKV 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L+DCLACSGCITS+E +L++ QSH +K N K S ++ K +V+S++ Q
Sbjct: 53 SITLSDCLACSGCITSSEEILLSSQSHSVFLK-----NWGKLSQQQD-KFLVVSVSPQCR 106
Query: 126 LSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCFSLV-----ELENEF 173
LSL + L+ E L FF++ +G ++ + I+ + + EN
Sbjct: 107 LSLAQYYGLTLEAADLCLMNFFQKHFQCKYMVGTEMGRIISISKTVEKIIAHKKQKENTG 166
Query: 174 LDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
DR PL ++ CPG++ Y EK+ + + P + VKSPQQ+ GSLI+ E L +
Sbjct: 167 ADR-----KPLLSAVCPGFLIYTEKTKPQLV-PMLLNVKSPQQITGSLIRATF-ESLAIA 219
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA--NELATTTLQE 291
YH++LMPC+DKKLEASR + ++ +DCVIT E+ +L N + L E
Sbjct: 220 RESFYHLSLMPCFDKKLEASRPESLDD-----GIDCVITPREIVTMLQELNLDFKSFLTE 274
Query: 292 EKD--GILDWP-WDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
+ G L P WD P N G+ GGYA+ ++ A+++L PG +V RN
Sbjct: 275 DTSLYGRLSPPGWD---PRVHWASNLGGTCGGYAYQYVT-AVQRLHPGSQMIVLEG--RN 328
Query: 348 PDIREATFTCGDVTLRFCIA-NGFRNIQNLIQKLK--------------RKRL------- 385
DI E D + +GFRNIQNL++KL RKR
Sbjct: 329 SDIVEYRLLHDDRIIAAASELSGFRNIQNLVRKLTSGSGSERKRNITALRKRRTGPKANS 388
Query: 386 ------------PY--DFIEIMACPSGCLNGGAQIRNEK 410
PY D+IE+ ACP C+NGG + E+
Sbjct: 389 REMAAATAATADPYHSDYIEVNACPGACMNGGGLLNGEQ 427
>gi|365758752|gb|EHN00579.1| Nar1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 493
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 232/462 (50%), Gaps = 90/462 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIR---IQDDGAYIQETNGREEKL 62
S +L DL+DFI P+ C+KP + +G K + + DG Y E + ++L
Sbjct: 1 MSALLSEADLNDFISPALACVKPTQV-------SGGKQKNNNVNADGEY--EVSTEPDQL 51
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+KV I+L+DCLACSGCITS+E +L++ QSH V EN S + K +V+S++
Sbjct: 52 EKVSITLSDCLACSGCITSSEEILLSSQSH----SVFLENWGKL--SQQQDKFLVVSVSP 105
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCFSLV-----ELE 170
Q LSL + L+ E L FF+R +G ++ V I+ + + +
Sbjct: 106 QCRLSLAHYYGLTLEAADLCLMNFFQRQFHCKYMVGTEMGRIVSISKTVEKIVANKRQKQ 165
Query: 171 NEFLDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
+ +DR PL ++ CPG++ Y EK+ + + P + VKSPQQ+ GSLIK E L
Sbjct: 166 DAGVDR-----KPLLSAVCPGFLIYTEKTKPQ-LAPMLLNVKSPQQITGSLIKNTF-ESL 218
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA--NELATTT 288
GV YH++LMPC+DKKLEASR + ++ +DCVIT E+ +L N ++
Sbjct: 219 GVASESFYHLSLMPCFDKKLEASRPESLDD-----GIDCVITPREVVTMLQELNLDFSSF 273
Query: 289 LQEEKD--GILDWP-WDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKP 344
+ E+ G L P WD P N G+ GGYA+ ++ A+++L PG +V
Sbjct: 274 ITEDTTLYGRLSPPGWD---PRVHWASNLGGTCGGYAYQYVT-AMQKLHPGSQMLVLEG- 328
Query: 345 LRNPDIREATFT-CGDVTLRFCIANGFRNIQNLIQKL---------------KRKRL--- 385
RN DI E D+ +GFRNIQNL++KL +++R+
Sbjct: 329 -RNSDIVEYRLQQSDDIIAAASELSGFRNIQNLVRKLTSATGPERKRNITALRKRRMGPN 387
Query: 386 ---------------PY--DFIEIMACPSGCLNGGAQIRNEK 410
PY D+IE+ ACP C+NGG + E+
Sbjct: 388 ANSRKMTAATAVTADPYHSDYIEVNACPGACMNGGGLLNGEQ 429
>gi|406603961|emb|CCH44543.1| hypothetical protein BN7_4109 [Wickerhamomyces ciferrii]
Length = 528
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 222/468 (47%), Gaps = 87/468 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKP---IPIEKPSGPRTGAKIRIQDDGAYIQET--NGREE 60
S +L DL+DFI P CIKP I + +I+I +G ++ + +G +
Sbjct: 1 MSAILSDADLNDFISPGLACIKPAGEIRSNNNTTNNDSYEIQIGSNGEALEVSIDDGTIK 60
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
L ISL DCLACSGCITSAE VL+ +Q+H ++ I + +N K LS+
Sbjct: 61 DLPSASISLQDCLACSGCITSAEEVLLAKQTHTLLLDEINQF--------KNDKIFCLSI 112
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q +SL + ++ L F ++ G ++ S+ + NE +++ L
Sbjct: 113 SHQSRISLSTYLNIPIVKIDELLINLFSEKYGFKFIVGTEFGRILSITKTNNELINKKLQ 172
Query: 180 GG--GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
+S CPG+V Y EK+ E +LPY+ +KSPQQ+ G ++KT +++++ + P I
Sbjct: 173 NNLNQVQLSSICPGFVLYVEKTKPE-LLPYLFNIKSPQQITGFILKTLISKQMSIQPDKI 231
Query: 238 YHVTLMPCYDKKLEASRAD----FYNEELGYRDVDCVITAVE------LEVLLANELATT 287
YH+++MPC+DKKLEA+R + Y ++ DVDCVIT E LE + +E T
Sbjct: 232 YHLSIMPCFDKKLEAARPEESDPLYQNQI---DVDCVITPKELIELFKLENINLSEYITK 288
Query: 288 TLQE-----EKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVL----SHAIRQLCPGESP 338
T + EK WP + L G+ SGGY+ N + ++ Q P E
Sbjct: 289 TPEPPLSLYEKAAPKFWPSPVESWSSNL---GSVSGGYSENYILSLQNYYQTQGIPTEIK 345
Query: 339 VVEFKPLRNPDIREATF---TCGDVTLRFCIANGFRNIQNLIQKLK-------------- 381
++ K N D+ E + G I NGFRNIQNL++KLK
Sbjct: 346 TIQGK---NSDVLEFQLINSSTGSKLGSSAIINGFRNIQNLVRKLKPSNKVKIGGKGNSL 402
Query: 382 ----RKRLPY---------------------DFIEIMACPSGCLNGGA 404
+ RL D++E+MACP GC+NGG
Sbjct: 403 TARRKARLQQKSNPEVAVTKGEDISADPSTCDYVEVMACPGGCINGGG 450
>gi|259511275|sp|A6ZRK3.1|NAR1_YEAS7 RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|151944307|gb|EDN62585.1| nuclear architecture related [Saccharomyces cerevisiae YJM789]
Length = 491
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 230/459 (50%), Gaps = 86/459 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L +DL+DFI P+ C+KP + SG G K + +G Y E + ++L+KV
Sbjct: 1 MSALLSESDLNDFISPALACVKPTQV---SG---GKKDNVNMNGEY--EVSTEPDQLEKV 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L+DCLACSGCITS+E +L++ QSH +K N K S ++ K +V+S++ Q
Sbjct: 53 SITLSDCLACSGCITSSEEILLSSQSHSVFLK-----NWGKLSQQQD-KFLVVSVSPQCR 106
Query: 126 LSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCFSLV-----ELENEF 173
LSL + L+ E L FF++ +G ++ + I+ + + EN
Sbjct: 107 LSLAQYYGLTLEAADLCLMNFFQKHFQCKYVVGTEMGRIISISKTVEKIIAHKKQKENTG 166
Query: 174 LDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
DR PL ++ CPG++ Y EK+ + + P + VKSPQQ+ GSLI+ E L +
Sbjct: 167 ADR-----KPLLSAVCPGFLIYTEKTKPQ-LAPMLLNVKSPQQITGSLIRATF-ESLAIA 219
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA--NELATTTLQE 291
YH++LMPC+DKKLEASR E LG +DCVIT E+ +L N + L E
Sbjct: 220 RESFYHLSLMPCFDKKLEASRP----ESLG-DGIDCVITPREIVTMLQELNLDFKSFLTE 274
Query: 292 EKD--GILDWP-WDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
+ G L P WD P N G+ GGYA+ ++ A+++L PG +V RN
Sbjct: 275 DTSLYGRLSPPGWD---PRVHWASNLGGTCGGYAYQYVT-AVQRLHPGSQMIVLEG--RN 328
Query: 348 PDIREATFTCGDVTLRFCIA-NGFRNIQNLIQKLK--------------RKRL------- 385
DI E D + +GFRNIQNL++KL RKR
Sbjct: 329 SDIVEYRLLHDDRIIAAASELSGFRNIQNLVRKLTSGSGSERKRNITALRKRRTGPKANS 388
Query: 386 ------------PY--DFIEIMACPSGCLNGGAQIRNEK 410
PY D+IE+ ACP C+NGG + E+
Sbjct: 389 REMAAVAAATADPYHSDYIEVNACPGACMNGGGLLNGEQ 427
>gi|190409209|gb|EDV12474.1| protein LET1 [Saccharomyces cerevisiae RM11-1a]
gi|323331866|gb|EGA73278.1| Nar1p [Saccharomyces cerevisiae AWRI796]
gi|323335871|gb|EGA77149.1| Nar1p [Saccharomyces cerevisiae Vin13]
gi|323346803|gb|EGA81082.1| Nar1p [Saccharomyces cerevisiae Lalvin QA23]
gi|392297112|gb|EIW08213.1| Nar1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 491
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 230/459 (50%), Gaps = 86/459 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L +DL+DFI P+ C+KP + SG G K + +G Y E + ++L+KV
Sbjct: 1 MSALLSESDLNDFISPALACVKPTQV---SG---GKKDNVNMNGEY--EVSTEPDQLEKV 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L+DCLACSGCITS+E +L++ QSH +K N K S ++ K +V+S++ Q
Sbjct: 53 SITLSDCLACSGCITSSEEILLSSQSHSVFLK-----NWGKLSQQQD-KFLVVSVSPQCR 106
Query: 126 LSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCFSLV-----ELENEF 173
LSL + L+ E L FF++ +G ++ + I+ + + EN
Sbjct: 107 LSLAQYYGLTLEAADLCLMNFFQKHFQCKYMVGTEMGRIISISKTVEKIIAHKKQKENTG 166
Query: 174 LDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
DR PL ++ CPG++ Y EK+ + + P + VKSPQQ+ GSLI+ E L +
Sbjct: 167 ADR-----KPLLSAVCPGFLIYTEKTKPQ-LAPMLLNVKSPQQITGSLIRATF-ESLAIA 219
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA--NELATTTLQE 291
YH++LMPC+DKKLEASR + ++ +DCVIT E+ +L N + L E
Sbjct: 220 RESFYHLSLMPCFDKKLEASRPESLDD-----GIDCVITPREIVTMLQELNLDFKSFLTE 274
Query: 292 EKD--GILDWP-WDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
+ G L P WD P N G+ GGYA+ ++ A+++L PG +V RN
Sbjct: 275 DTSLYGRLSPPGWD---PRVHWASNLGGTCGGYAYQYVT-AVQRLHPGSQMIVLEG--RN 328
Query: 348 PDIREATFTCGDVTLRFCIA-NGFRNIQNLIQKLK--------------RKRL------- 385
DI E D + +GFRNIQNL++KL RKR
Sbjct: 329 SDIVEYRLLHDDRIIAAASELSGFRNIQNLVRKLTSGSGSERKRNITALRKRRTGPKANS 388
Query: 386 ------------PY--DFIEIMACPSGCLNGGAQIRNEK 410
PY D+IE+ ACP C+NGG + E+
Sbjct: 389 REMAAATAATADPYHSDYIEVNACPGACMNGGGLLNGEQ 427
>gi|323307488|gb|EGA60759.1| Nar1p [Saccharomyces cerevisiae FostersO]
Length = 493
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 229/457 (50%), Gaps = 82/457 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L +DL+DFI P+ C+KP + SG G K + +G Y E + ++L+KV
Sbjct: 1 MSALLSESDLNDFISPALACVKPTQV---SG---GKKDNVNMNGEY--EVSTEPDQLEKV 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L+DCLACSGCITS+E +L++ QSH +K N K S ++ K +V+S++ Q
Sbjct: 53 SITLSDCLACSGCITSSEEILLSSQSHSVFLK-----NWGKLSQQQD-KFLVVSVSPQCR 106
Query: 126 LSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCFSLV-----ELENEF 173
LSL + L+ E L FF++ +G ++ + I+ + + EN
Sbjct: 107 LSLAQYYGLTLEAADLCLMNFFQKHFQCKYMVGTEMGRIISISKTVEKIIAHKKQKENTG 166
Query: 174 LDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
DR PL ++ CPG++ Y EK+ + + P + VKSPQQ+ GSLI+ E L +
Sbjct: 167 ADR-----KPLLSAVCPGFLIYTEKTKPQ-LAPMLLNVKSPQQITGSLIRATF-ESLAIA 219
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA--NELATTTLQE 291
YH++LMPC+DKKLEASR + ++ +DCVIT E+ +L N + L E
Sbjct: 220 RESFYHLSLMPCFDKKLEASRPESLDD-----GIDCVITPREIVTMLQELNLDFKSFLTE 274
Query: 292 EKD--GILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
+ G L P + H + GT GGYA+ ++ A+++L PG +V RN D
Sbjct: 275 DTSLYGRLSPPGWDPRVHWASNLGGT-CGGYAYQYVT-AVQRLHPGSQMIVLEG--RNSD 330
Query: 350 IREATFTCGDVTLRFCIA-NGFRNIQNLIQKLK--------------RKRL--------- 385
I E D + +GFRNIQNL++KL RKR
Sbjct: 331 IVEYRLLHDDRIIAAASELSGFRNIQNLVRKLTSGSGSERKRNITALRKRRTGPKANSRE 390
Query: 386 ----------PY--DFIEIMACPSGCLNGGAQIRNEK 410
PY D+IE+ ACP C+NGG + E+
Sbjct: 391 MAAATAATADPYHSDYIEVNACPGACMNGGGLLNGEQ 427
>gi|401842923|gb|EJT44923.1| NAR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 493
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 259/536 (48%), Gaps = 107/536 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIR---IQDDGAYIQETNGREEKL 62
S +L DL+DFI P+ C+KP + +G K + + DG Y E + ++L
Sbjct: 1 MSALLSEADLNDFISPALACVKPTQV-------SGGKQKNNNVNADGEY--EVSTEPDQL 51
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+KV I+L+DCLACSGCITS+E +L++ QSH V EN S + K +V+S++
Sbjct: 52 EKVSITLSDCLACSGCITSSEEILLSSQSHS----VFLENWGKL--SQQQDKFLVVSVSP 105
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCFSLV-----ELE 170
Q LSL + L+ E L FF+R +G ++ V I + + +
Sbjct: 106 QCRLSLAHYYGLTLEAADLCLMNFFQRQFHCKYMVGTEMGRIVSINKTVEKIVANKRQKQ 165
Query: 171 NEFLDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
+ +DR PL ++ CPG++ Y EK+ + + P + VKSPQQ+ GSLIK E L
Sbjct: 166 DAGVDR-----KPLLSAVCPGFLIYTEKTKPQ-LAPMLLNVKSPQQITGSLIKNTF-ESL 218
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA---TT 287
GV YH++LMPC+DKKLEASR + ++ +DCVIT E+ +L EL+ ++
Sbjct: 219 GVASESFYHLSLMPCFDKKLEASRPESLDD-----GIDCVITPREVVTML-QELSLDFSS 272
Query: 288 TLQEEKD--GILDWP-WDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFK 343
+ E+ G L P WD P N G+ GGYA+ ++ A+++L PG +V
Sbjct: 273 FITEDTALYGRLSPPGWD---PRVHWASNLGGTCGGYAYQYVT-AMQKLHPGSQMLVLEG 328
Query: 344 PLRNPDIREATFT-CGDVTLRFCIANGFRNIQNLIQKL---------------KRKRL-- 385
RN DI E D+ +GFRNIQNL++KL +++R+
Sbjct: 329 --RNSDIVEYRLQQSDDIIAAASELSGFRNIQNLVRKLTSATGPERKRNITALRKRRMGP 386
Query: 386 ----------------PY--DFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCD 427
PY D+IE+ ACP C+NGG + E + +L+ + ++
Sbjct: 387 NANSRKMTAATAATADPYHSDYIEVNACPGACMNGGGLLNGE------QNSLKRKQLVQA 440
Query: 428 LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP------KNNIALNVKW 477
L K R LE + LG K + L+ Y P K+ +A+ W
Sbjct: 441 LNK---RHGQELEMVDPLALGPKLEEAAMRPLSLEYIFAPVKQAAEKDLVAVGSTW 493
>gi|349580709|dbj|GAA25868.1| K7_Nar1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 491
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 230/459 (50%), Gaps = 86/459 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L +DL+DFI P+ C+KP + SG G K + +G Y E + ++L+KV
Sbjct: 1 MSALLSESDLNDFISPALACVKPTQV---SG---GKKDNVNMNGEY--EVSTEPDQLEKV 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L+DCLACSGCITS+E +L++ QSH +K N K S ++ K +V+S++ Q
Sbjct: 53 SITLSDCLACSGCITSSEEILLSSQSHSVFLK-----NWGKLSQQQD-KFLVVSVSPQCR 106
Query: 126 LSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCFSLV-----ELENEF 173
LSL + L+ E L FF++ +G ++ + I+ + + EN
Sbjct: 107 LSLAQYYGLTLEAADLCLMNFFQKHFQCKYMVGTEMGRIISISKTVEKIIAHKKQKENTG 166
Query: 174 LDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
DR PL ++ CPG++ Y EK+ + + P + VKSPQQ+ GSLI+ E L +
Sbjct: 167 ADR-----KPLLSAVCPGFLIYTEKTKPQ-LAPMLLNVKSPQQITGSLIRATF-ESLAIA 219
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA--NELATTTLQE 291
YH++LMPC+DKKLEASR E LG +DCVIT E+ +L N + L E
Sbjct: 220 RESFYHLSLMPCFDKKLEASRP----ESLG-DGIDCVITPREIVTMLQELNLDFKSFLTE 274
Query: 292 EKD--GILDWP-WDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
+ G L P WD P N G+ GGYA+ ++ A+++L PG +V RN
Sbjct: 275 DTSLYGRLSPPGWD---PRVHWASNLGGTCGGYAYQYVT-AVQRLHPGSQMMVLEG--RN 328
Query: 348 PDIREATFTCGDVTLRFCIA-NGFRNIQNLIQKLK--------------RKRL------- 385
DI E D + +GFRNIQNL++KL RKR
Sbjct: 329 SDIVEYRLLHDDRIIAAASELSGFRNIQNLVRKLTSGSGSERKRNITALRKRRTGPKANS 388
Query: 386 ------------PY--DFIEIMACPSGCLNGGAQIRNEK 410
PY D+IE+ ACP C+NGG + E+
Sbjct: 389 REMAAVAAATADPYHSDYIEVNACPGACMNGGGLLNGEQ 427
>gi|336371429|gb|EGN99768.1| hypothetical protein SERLA73DRAFT_179963 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384195|gb|EGO25343.1| hypothetical protein SERLADRAFT_465344 [Serpula lacrymans var.
lacrymans S7.9]
Length = 399
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 154/271 (56%), Gaps = 44/271 (16%)
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ S CPGW+CYAEK+H E +LP+I+R KSPQQ+MG+L+K+ + + G P IYHV++M
Sbjct: 1 MLASACPGWICYAEKAHSE-MLPFIARTKSPQQIMGTLVKSWIGNQWGKRPDEIYHVSVM 59
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PCYDKKLEASR DFYNE RDVDCVIT ELE+++ + ++ + + P+
Sbjct: 60 PCYDKKLEASRQDFYNEMYSTRDVDCVITTGELELMMREKGWDLSVPVDSEDAP--PFTP 117
Query: 304 HNPH-------RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
+P +L GT SG Y H+++S A+ ++ G + + FK +R D E T
Sbjct: 118 SSPSHEEQFLPELLSHPGTSSGSYLHSLIS-AMSRVSDGPT-SLSFKTVRTSDYEEYTLR 175
Query: 357 ---CGDVTLRFCIANGFRNIQNLIQKLKRK-------------------RLP-------- 386
G+V + GFRN+QN+++K+ R+ RL
Sbjct: 176 NQETGEVVFKGAKCYGFRNLQNVVRKVGREAGVQVGKGAAGRMAGGIRARLKKNADGEAD 235
Query: 387 --YDFIEIMACPSGCLNGGAQIRNEKVASPK 415
YD++E+MACP GC+NGG Q++ +AS K
Sbjct: 236 RGYDYVEVMACPGGCVNGGGQLKPIALASTK 266
>gi|254584624|ref|XP_002497880.1| ZYRO0F15642p [Zygosaccharomyces rouxii]
gi|186703732|emb|CAQ43423.1| Nuclear architecture-related protein 1 [Zygosaccharomyces rouxii]
gi|238940773|emb|CAR28947.1| ZYRO0F15642p [Zygosaccharomyces rouxii]
Length = 484
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 218/472 (46%), Gaps = 88/472 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S L DL+D+I P CI P + + A D+ QE++ E KV
Sbjct: 1 MSAKLSEEDLNDYIAPGPICINPAGSSSSNKAASNANGTPSDELEVGQESSEPE----KV 56
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
ISL DCLAC+GCITS+E VL+++QSH + ++ ++K +V+S+A Q
Sbjct: 57 SISLQDCLACAGCITSSEEVLLSKQSHTVFLDAWKQLQG-------SSKILVISVAPQCR 109
Query: 126 LSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHC----FSLVELENEFL 174
LSL F LS Q+ L F +G +L + I H F L + ++
Sbjct: 110 LSLAQYFGLSLPQMDKALLNIFASVLHCRYAVGTELGRVIAIQHTNEHLFKLKKQQSINN 169
Query: 175 DRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
D G P S CPG+V YAEK+ E + P + VKSPQQV GSL+K L +
Sbjct: 170 DGNTKRGTPRLCSVCPGFVLYAEKTRPELV-PLLLNVKSPQQVTGSLLKQTLPPE----- 223
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-----------E 283
IYH++LMPC+DKKLEASR D E VDCV+T E ++ +
Sbjct: 224 QEIYHLSLMPCFDKKLEASRPDAVEE-----GVDCVLTPREFLAIMQELQIDIKDHLNVD 278
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESPVVEF 342
LA + + G WD P N G+ SGGYA + ++ L PG +
Sbjct: 279 LAASAHELSPPG-----WD---PQVHWASNAGSSSGGYAFQYARY-LQSLNPGSQ--IHI 327
Query: 343 KPLRNPDIREATFTCGDVTLRFCIAN----GFRNIQNLIQKLK----------RKRL--- 385
RN D+RE T D + + GFRNIQN+++KLK RKR
Sbjct: 328 LNGRNGDVREYRVTASDDQQKVFGSTSELYGFRNIQNMVRKLKGAQRGGRVVVRKRGANK 387
Query: 386 -------------PY--DFIEIMACPSGCLNGGAQIRNEKVASPKETALELE 422
PY +FIE+MACP GC+NGG + E + TA L+
Sbjct: 388 GDSAQNGATMQADPYEGEFIEVMACPGGCINGGGLLSGESSVKRRATAQVLD 439
>gi|409386319|ref|ZP_11238741.1| Periplasmic [Fe] hydrogenase large subunit [Lactococcus
raffinolactis 4877]
gi|399206417|emb|CCK19656.1| Periplasmic [Fe] hydrogenase large subunit [Lactococcus
raffinolactis 4877]
Length = 456
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 200/406 (49%), Gaps = 29/406 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
DC++C CI ++ I ++ +EV +++ + H + + L A Q L +
Sbjct: 64 VDCISCGQCIVVCQTGAIAEKDQTQEVWAALQDPSKHVVVQTAPSVRVTLGEAFQ--LPV 121
Query: 129 GAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
G ++VA LC R+G D V D +A F+++E EFL R + G P+FTS
Sbjct: 122 GTNV---EGKMVAALC----RIGFDRVFDTNVAADFTIMEEATEFLQRVENNGPFPMFTS 174
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
PGWV Y E H E I P +S KSPQQ+ G+LIKT A+K + P I+ V +MPC
Sbjct: 175 CSPGWVKYCEAYHPELI-PNLSSCKSPQQMFGALIKTWYAQKNNIEPKDIFVVGIMPCTA 233
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK E +R + G+ DVD +T EL ++ + E D D P +
Sbjct: 234 KKFEVTREN--QAAAGFTDVDIALTTRELARMI--DKVGIRFNELPDETFDQPLGDATGA 289
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
+ +GG L A L V+F+ +R I+EAT+ T++ +
Sbjct: 290 GYIF---GATGGVMEAALRTASETLAGHALEAVDFEEVRGTKGIKEATYEMSGQTVKVAV 346
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKETAL 419
A+G N + LI+++++ Y F+EIMACP GC+NGG Q +RN + S + AL
Sbjct: 347 ASGINNAKRLIEQIEKGEAFYHFVEIMACPGGCVNGGGQPVQPGSVRNFVDLQSKRAQAL 406
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+E L +S EN L+ +Y+ +L + K H+L+TS+ N
Sbjct: 407 YVEDRGKGLRRS--HENPVLQRIYQEFLEKPGSHKAHHILHTSFQN 450
>gi|444315436|ref|XP_004178375.1| hypothetical protein TBLA_0B00110 [Tetrapisispora blattae CBS 6284]
gi|387511415|emb|CCH58856.1| hypothetical protein TBLA_0B00110 [Tetrapisispora blattae CBS 6284]
Length = 481
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 227/462 (49%), Gaps = 79/462 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI PS C+KP I K +K+ Q+ I E E+L+KV
Sbjct: 1 MSALLSEADLNDFISPSLACVKPTVINK-------SKVEEQNKDGEI-EVGKEPEELEKV 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L DCLAC GCITS+E +L+++QSH + N+ K +N + +V+S + Q
Sbjct: 53 SITLQDCLACVGCITSSEEILLSRQSHSVFL-----NDWSKLE--DNKRELVVSASPQTR 105
Query: 126 LSLGAKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---G 181
LSL + L+ ++ FFK V+ + ++ + N+ + G
Sbjct: 106 LSLANYYGLTLQKFDIIFVNFFKSHFKAKFVVGTQLGRNVTIRQTNNKLMKLKEEGILDE 165
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P S CPG+V Y EK+ + P + VKSPQQ+ GSL+K + + L + +YH+T
Sbjct: 166 KPRLCSVCPGFVLYCEKTKPGLV-PLLLNVKSPQQITGSLLKDYSKKHLS---NRLYHLT 221
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN--------ELATTTLQEEK 293
+MPC+DKKLEASR+D G +VDCVIT E +L +++ T+ +
Sbjct: 222 IMPCFDKKLEASRSD------GEEEVDCVITPKEFVTMLDELDLNFKDYDISDTSSTQIL 275
Query: 294 DGILDWPWDEHNPHRMLLVN-GTGSGGYAHN-VLSHAIRQLCPGESPVVEFKPLRNPDIR 351
+ WD P N G+ SGGYA +L+ +++ E+ +V + +N D+
Sbjct: 276 YEMSPKSWD---PEIHWASNEGSSSGGYAFQYILAMSMKY---PETDLVMLQG-KNSDVM 328
Query: 352 EATFTCGDVTLRFCIAN-----GFRNIQNLIQKL-----KRKRL---------------- 385
E T IA+ GFRNIQNL++KL KR+ +
Sbjct: 329 EYRLIDNIQTPPRVIASSSEIYGFRNIQNLVRKLIGGDMKRRNVKILRKRNTTKNNSNSK 388
Query: 386 -----PY--DFIEIMACPSGCLNGGAQIRNEKVASPKETALE 420
P+ DFIE+MACP GC+NGG I E+ +S + ++
Sbjct: 389 PTAIDPHKTDFIEVMACPGGCINGGGLINGEQNSSKRRALIQ 430
>gi|334340941|ref|YP_004545921.1| hydrogenase Fe-only [Desulfotomaculum ruminis DSM 2154]
gi|334092295|gb|AEG60635.1| hydrogenase, Fe-only [Desulfotomaculum ruminis DSM 2154]
Length = 657
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 200/412 (48%), Gaps = 24/412 (5%)
Query: 58 REEKLKKVEISLTD--CLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTK 114
R + + ++ SL D C+ C CI L + S EV IR+ K
Sbjct: 173 RTQIIAAMDQSLADSACINCGQCIAVCPCGALSSNSSIAEVWAAIRDPK----------K 222
Query: 115 TIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFL 174
T+V +A P +LG F L V K+ ++ G D V D + VE NEFL
Sbjct: 223 TVVCQIAPAPRAALGEMFGLGSVDVTGKIVTALRKSGFDKVFDTVFTADMTTVEESNEFL 282
Query: 175 DRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
R SGG PLFTS CPGWV YAE+ H E +L +S +SPQQ+ GS++K A+ LG+
Sbjct: 283 GRLTSGGKLPLFTSCCPGWVKYAEEFHPE-LLENLSTCRSPQQMFGSVLKKKYAKDLGIT 341
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK 293
P ++ V++MPC KK EA R +F + G DVD V+T VE L A +
Sbjct: 342 PEEMFVVSIMPCTAKKYEAKRPEFMTD--GVYDVDAVLTTVEAAQLFKE--AGILFDNLE 397
Query: 294 DGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPDIRE 352
+GI D P ++ +L GT +GG +V+ + +L E + VEF + D +
Sbjct: 398 EGIFDQPMEQTTGSGVLF--GT-TGGVMESVVRYVAGKLLNAEGRIDVEFTRGLD-DTKI 453
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
A GD L I NG + LI+K++ L +E+MACP+GC+ GG Q
Sbjct: 454 ADLNVGDTKLTLAIVNGLAAAEELIKKIQSGELEVHAVEVMACPAGCVGGGGQPAQNDRK 513
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
+ + + E+ I + + ++N L+ +++ + GG H L+T YH
Sbjct: 514 ARQCRSDEIYNIDSKMVLHKAQDNEDLDKIFQKYWGGCCNHDTHHDLHTHYH 565
>gi|340057650|emb|CCC51996.1| putative iron-containing hydrogenase [Trypanosoma vivax Y486]
Length = 554
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 212/456 (46%), Gaps = 57/456 (12%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M+++ FS L L +D +I PS+ C+ P QD + +G
Sbjct: 83 MSAAEFSSSLMLAGMD-YIAPSEACVLPT--------------VFQDSSVGVVGRHGSGG 127
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
++ V+ISL DCLACSGC+T+AE++LIT QS EE++ KA S E T+ ++++
Sbjct: 128 EV--VKISLQDCLACSGCVTTAETILITSQSREEIL---------KARSTEPTRPFLVTI 176
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q ++ QV L GFF+ LG V D+ A S + E+ R
Sbjct: 177 SDQSAAAIAGHLKRPIRQVYNMLSGFFRSVLGAQYVADLRWALHVSAEKTAKEYCRRMRH 236
Query: 180 GGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
PL S CPGWVCY EK G + P V SPQ + G KT A I
Sbjct: 237 DPRKLPLIVSACPGWVCYCEKQGGP-LHPLHCPVMSPQGIAGCYAKTMCAR--------I 287
Query: 238 YHVTLMPCYDKKLEASR--ADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
HV++ PC+D+KLEA R + NE R D V++ EL + + D
Sbjct: 288 CHVSVQPCFDRKLEAVRDVSPSGNE----RYTDFVLSTQELLEWMRETDPSFPWVAPLDS 343
Query: 296 ILDW--PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE-SP---VVEFKPLRNPD 349
L+ P P R GSGGY + +A R+L E SP E K N
Sbjct: 344 ALESPPPLAMKEPARAHTATMEGSGGYHRFAMHYAARELHKTELSPDDVCYETKRNANHQ 403
Query: 350 IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKR---LPYDFIEIMACPSGCLNGGAQI 406
+ + G+V +C+A GF+ IQN ++ LKRK+ Y FIE+MACP GCLNGG Q+
Sbjct: 404 LSTSAKNPGEV---YCVAYGFQQIQNTVRGLKRKQASVASYTFIELMACPGGCLNGGGQV 460
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHL 442
R+ + + +E + DL + R T L
Sbjct: 461 RHGSIVN-EEALTAVNDAFSDLLYGDARSLGTSSSL 495
>gi|339441155|ref|YP_004707160.1| hypothetical protein CXIVA_00910 [Clostridium sp. SY8519]
gi|338900556|dbj|BAK46058.1| hypothetical protein CXIVA_00910 [Clostridium sp. SY8519]
Length = 581
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 227/478 (47%), Gaps = 54/478 (11%)
Query: 21 PSQECIKPIPIEKPS------------GPRTGAKIRIQDDGAYIQETNGREEKL---KKV 65
P++E P+P++ G A +Q GA E G K+ K
Sbjct: 128 PAKEAFDPVPVKTDGIIVRDDNKCIRCGRCVAACENLQGIGAIKMEGEGLTAKVVPSKGA 187
Query: 66 EISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+ + C+ C CIT L + + V+++I++ + + + +S A
Sbjct: 188 TLIESGCVGCGQCITVCPVGALHERDDVDAVLEMIKDPDKYVVIQAAPSVRASISEAFGY 247
Query: 125 VLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+ G K KL +++G D V D + +++E NE ++R +GG P
Sbjct: 248 PIGSGTK---------GKLAAAMRKIGFDRVFDTVFSADLTIMEEANELIERIQTGGTLP 298
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CPGW+ Y E + + +L ++S KSPQQ+ G+++KT L+EK G+ I V+ M
Sbjct: 299 MFTSCCPGWINYIETYYDD-MLAHVSSCKSPQQMFGAMVKTFLSEKEGIPADKIVVVSTM 357
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK E R D G DVD +T+ EL ++ E+ GI +P E
Sbjct: 358 PCTAKKRELGRED--QNAAGVPDVDFSLTSRELARMI-----------ERSGI-SFPGLE 403
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQL---CPGESP-VVEFKPLR-NPDIREATF 355
L GTG+G G V+ A+R GE+ +EF +R DI+EAT+
Sbjct: 404 DEAFDAPLGIGTGAGTLFGATGGVMEAALRTANDWLNGEAQGEIEFTEVRGTKDIKEATY 463
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK-VASP 414
GD+TLR I +G +N + L++K++ + YDF+E MACP GC+NGG Q + + V
Sbjct: 464 KVGDLTLRVAIVSGLKNAKALLEKMRAGEVEYDFVEFMACPGGCVNGGGQPQQKACVRMV 523
Query: 415 KETALELETILCDLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
K+ E L L KS+ EN + LY ++LG ++K L+TSY + K
Sbjct: 524 KDLRAERAMTLYRLDKSDMLRKSHENPEIIELYDSYLGKPGSEKAHATLHTSYKSQAK 581
>gi|296425093|ref|XP_002842078.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638335|emb|CAZ86269.1| unnamed protein product [Tuber melanosporum]
Length = 514
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 214/451 (47%), Gaps = 69/451 (15%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKPI + + I E L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIETLPAA-----PNPPPANSYEVILEDKAPPTDLPPA 55
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + NAH K V ++ Q
Sbjct: 56 QISLTDCLACSGCVTSAEAVLVSLQSHNEVLANL---NAHP------KKLFVALISPQSK 106
Query: 126 LSLGAKFALSH-------EQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRF 177
SL + +S E+++ G + G DLVLD + V E +
Sbjct: 107 ASLATAYGVSADVAGHMIERLLCSPEGICREGRGFDLVLDTNATREVA-VRCAAEEVVMA 165
Query: 178 LSGGG--------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK 229
+ GG P+ TS CPG+VCY E + I P++SR+KSPQ ++G+ +K+ L +
Sbjct: 166 MQGGKDGVNGRKMPILTSACPGFVCYLESTQPALI-PHLSRLKSPQAILGTAVKSLLHKD 224
Query: 230 LGVHPSHIYHVTLMPCYDKKLEASRADF----YNEELG--YRDVDCVITAVELEVLLANE 283
+ IY V +MPC+DKKLE +R + + E G RDVDCVIT EL L
Sbjct: 225 VEDGVKGIYVVGVMPCFDKKLEGARGELTSGAWMEREGEVVRDVDCVITTRELISLAQAR 284
Query: 284 ------------------LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVL 325
+A+ LQ L P E + + GT S GY ++
Sbjct: 285 GVDFATLPQSPPLPPPSGIASNLLQ-----TLKRP-TESTTTKTSPIPGT-SDGYLIHIA 337
Query: 326 SHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTL-RFCIANGFRNIQNLIQKLKRKR 384
+H I L P + + +P RN D + + + T+ R GFRNIQNL++ R
Sbjct: 338 TH-ILTLHP--TSTLRIEPGRNSDTIDYVISTPEKTIARLSRCYGFRNIQNLVRPGVRSE 394
Query: 385 LPYDFIEIMACPSGCLNGGAQIR--NEKVAS 413
Y ++E+MACP GC NGG Q+R +E +AS
Sbjct: 395 AEYTYVEVMACPGGCTNGGGQVRYDDEIIAS 425
>gi|145543049|ref|XP_001457211.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425026|emb|CAK89814.1| unnamed protein product [Paramecium tetraurelia]
Length = 406
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 208/408 (50%), Gaps = 55/408 (13%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEKLKK 64
FS ++++ + D+I PSQEC+KP+ +++Q D IQ + N + +
Sbjct: 2 FSSTIKISSVSDYIVPSQECVKPL----------MRNVKLQLDDPSIQLKPNLIKNQNNV 51
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
++SL DCLACSGC+T+AE++LI QS EE ++ I++ + + ++ Q
Sbjct: 52 AKVSLQDCLACSGCVTTAETILIQTQSLEEFLQAIKK-----------YQNPAIGISPQA 100
Query: 125 VLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL 184
SL + ++ + L F+ + V L +A ++ + + N + + PL
Sbjct: 101 RASLSYVLNYTDSEMHSILHQIFQEMNVKLY---DLAE-YTKIAINNSIKEFKETNLTPL 156
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
SECPGWVCYAEK+ E I+ ++S+VKSPQQ+ G++ K + H Y T+MP
Sbjct: 157 LCSECPGWVCYAEKTLDESIINHMSKVKSPQQIFGAIQKKN----------HDYLATIMP 206
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
CYDKKLEA R + N E D++ V+++ E+E + + + + ++ + +
Sbjct: 207 CYDKKLEAVRQE--NNE----DINIVLSSREIEQFVKDYIQKANIIPQQVQLQTMAIQDQ 260
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRF 364
H T S Y ++ + P + V++ +N D E T ++ +
Sbjct: 261 EYH------NTSSNNYLDYIIKSV---MMPNWT--VKYNIRKNKDFIEITIYNENMESQG 309
Query: 365 CIAN--GFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
A G +NI NL+ ++K K Y ++EIMACP GCLNGG QI+ +K
Sbjct: 310 IYARVFGLKNIANLVSQIKTKTCKYKYVEIMACPLGCLNGGGQIQIQK 357
>gi|397691471|ref|YP_006528725.1| Fe-only hydrogenase, catalytic subunit alpha [Melioribacter roseus
P3M]
gi|395812963|gb|AFN75712.1| Fe-only hydrogenase, catalytic subunit alpha [Melioribacter roseus
P3M]
Length = 576
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 210/403 (52%), Gaps = 22/403 (5%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++++DC+ C CI + + ++SH +EV+ + N+ K V+ +A
Sbjct: 184 LNISDCILCGQCILVCPTAALRERSHAKEVVNAL----------NDKKKFTVVQVAPAVR 233
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG-GP 183
+LG ++ L V K+ +RLG D V D +++E E ++R +GG P
Sbjct: 234 ATLGEEYNLPIGTNVTGKIITGLRRLGFDKVFDTNFGADLTILEEATELINRLGNGGVTP 293
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CPGW+ +AE+++ +L ++S KSP ++ G++IK++ A+K+G++P I+ V++M
Sbjct: 294 MFTSCCPGWIKFAEQNY-PHLLEHLSTCKSPHEMEGAIIKSYYAKKMGLNPEDIFVVSIM 352
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EASR + +++ DVD V+T EL L ++A + D D P E
Sbjct: 353 PCTVKKFEASRPELSEDKM--PDVDAVLTTRELVRLF--KVAGIDFNDLPDDEFDNPLGE 408
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTL 362
+ GT SGG L A +L E V+ +R D ++E + T+
Sbjct: 409 STGAAAIF--GT-SGGVMEAALRTAYFKLSGKELENVDLTNVRGFDGVKEFSVDINGSTV 465
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELE 422
+ NG N++ ++++++R Y FIE+MACP GC+NGG Q ++K ++ A L
Sbjct: 466 NVAVVNGIGNVRGILEQIERGESKYHFIEVMACPGGCINGGGQPIHQKPEKVQKRARALY 525
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
I + + EN +L+ LY +LG + +L+T+Y N
Sbjct: 526 EIDAKMKNRKSHENESLKKLYNEFLGEPNGHLSHELLHTTYVN 568
>gi|367008086|ref|XP_003688772.1| hypothetical protein TPHA_0P01810 [Tetrapisispora phaffii CBS 4417]
gi|357527082|emb|CCE66338.1| hypothetical protein TPHA_0P01810 [Tetrapisispora phaffii CBS 4417]
Length = 493
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 208/460 (45%), Gaps = 101/460 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI PS CIKP + K + + +G G+E +L+KV
Sbjct: 1 MSALLSAEDLNDFISPSMACIKPTEVNKEND-------NVDANGDL---QVGKESELEKV 50
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L DCLAC GCITS+E +L+++QS+ ++ + + +V+S++ Q
Sbjct: 51 SITLQDCLACVGCITSSEEILLSRQSYSVFLENYKNDGGQ----------LVISISPQSR 100
Query: 126 LSLGAKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---- 180
LS+ F LS + ++C + + V+ I S+ E E + +G
Sbjct: 101 LSMANHFGLSVMEFDIRMCQVVREKFACKYVVGTQIGREISIRETNREVREAVRAGTSSS 160
Query: 181 ---GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
GP S CPG+V Y EKS E + PY+ +KSPQQ+ G +IK + K +
Sbjct: 161 SQVSGPRLCSVCPGFVLYCEKSKPELV-PYLVDIKSPQQLTGQIIKNTVGGK-------V 212
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL-----------AT 286
YH+++MPC+DKKLEASR D E VDCVIT E V + EL AT
Sbjct: 213 YHLSVMPCFDKKLEASRQDSEGE------VDCVITPKEF-VKMLEELDCDMGSNPATPAT 265
Query: 287 TTLQEEKDGILD------WPWDEHNPHRMLLVNGTGSGGYAHN-VLSHAIRQLCPGESPV 339
T ++ ILD +PWD M + G+ SGG+A+ VL R G
Sbjct: 266 PTFGLDR-AILDEMSMPGYPWDA----TMSVNAGSSSGGFAYQYVLESQARHQAMGTRCA 320
Query: 340 VEFKPLRNPDI---REATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPY--------- 387
V +N D+ R G GFRNIQN++++L + P
Sbjct: 321 VLSTAGKNHDLLEHRLVDLGSGATLASSSEVYGFRNIQNMVRRLTQAARPRTLRLRARQR 380
Query: 388 -----------------------DFIEIMACPSGCLNGGA 404
+FIE+MACP GC+NGG
Sbjct: 381 AKQSPDSDPALPAPPAAADPYGAEFIEVMACPKGCINGGG 420
>gi|223999199|ref|XP_002289272.1| narf-like protein [Thalassiosira pseudonana CCMP1335]
gi|220974480|gb|EED92809.1| narf-like protein [Thalassiosira pseudonana CCMP1335]
Length = 468
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 211/438 (48%), Gaps = 53/438 (12%)
Query: 12 LTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTD 71
L ++DD++GPSQ C+ P+ PS + + DG+ NG K K ++L+D
Sbjct: 1 LNNVDDYLGPSQACVNPL-FTAPSKSANSTEAVVLGDGS-----NG--TKKTKATVTLSD 52
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
CL+CSGC+TSAE+VL++ S E++ + ++ K IV +++ + L
Sbjct: 53 CLSCSGCVTSAEAVLMSHHSIEKLREPLQPK-----------KLIVFTISAASLADLYRH 101
Query: 132 FALSHEQVVAK--LCGFFK-RLGVDLVLDVGIAHCFSLVELENEFLDRF----------- 177
L E+ L F G +V+D ++ SL+E EF R+
Sbjct: 102 LYLETEETEGDRDLSIFLNIEFGAKMVIDGILSQQISLLESAEEFCYRYKKQQVKNIIVT 161
Query: 178 --LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
S P+ S CPG+VC EK+ + ++P +S VKSP V G+L+K + V +
Sbjct: 162 NKQSTPLPMLASSCPGFVCLVEKTAPK-VVPLLSSVKSPMAVSGALLKNTTSSVNAVSNN 220
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEE---LGYRDVDCVITAVELEVLLANELATTTLQEE 292
IYHV +MPC+DKKLEA R DF E L Y + +I V+L VL EL +
Sbjct: 221 SIYHVAIMPCHDKKLEAGRNDFAWERQTLLQYSNSASIINEVDL-VLTTGELLEILTKAI 279
Query: 293 KDGILDWPWDEHNPHRMLLVNGT-GSGGYAHNVLSHAIRQL----CPGESPVVEFKPLRN 347
++ + + L G GSG YA + A R+L P + P+
Sbjct: 280 STATATTTSEDEKYNDLELDTGIHGSGSYADFIFRFATRKLFGCTLPSDKPLPWKGSTSF 339
Query: 348 PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLP-------YDFIEIMACPSGCL 400
++ LRF A GF+N+Q ++Q L +++ YD++EIMACPSGC
Sbjct: 340 SSSLASSEQSATSVLRFATAYGFKNVQLILQNLSKEKQTSNSMDSGYDYVEIMACPSGCP 399
Query: 401 NGGAQIRN-EKVASPKET 417
NGG QI + K +P+ET
Sbjct: 400 NGGGQIGSLGKRETPRET 417
>gi|71415673|ref|XP_809896.1| hydrogenase [Trypanosoma cruzi strain CL Brener]
gi|70874345|gb|EAN88045.1| hydrogenase, putative [Trypanosoma cruzi]
Length = 474
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 215/437 (49%), Gaps = 52/437 (11%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M++S FS L L +D +I PS+ C P +++ GA DG+ + +G E
Sbjct: 1 MSTSNFSASLMLAGMD-YIAPSEACTLPTRLQR------GA------DGSVQRHASGNE- 46
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
V+I+L DCLACSGC+T+AE++L+T QS E++KV ++E + ++++
Sbjct: 47 ---VVKITLQDCLACSGCVTTAETILVTSQSRAEIIKV---------RASELDRPFLVTI 94
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q S+ A + + + GFF+ L V D+ A S+ + E+ R
Sbjct: 95 SDQSAASIAAHLKVDSRRAFHIISGFFRTVLKSQYVSDLRWAQHISVEKTAQEYCHRLQH 154
Query: 180 GGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P+ S CPGWVCY EK G ILP + V SPQ + G K V P +
Sbjct: 155 ARDKLPMIVSACPGWVCYCEK-QGSAILPLLCPVMSPQGIAGCYAKR-------VFP-QL 205
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL 297
H+++ PC+D+KLEA+R + Y D V++ EL + A+ + +
Sbjct: 206 CHISVQPCFDRKLEAARDTSIDGNERYTDF--VLSTQELMEWMMETDASIPWEAPLNSSF 263
Query: 298 DW--PWDEHNPHRMLLVNGTGSGGY---AHNVLSHAIRQLCPGESPVV-EFKPLRNPDIR 351
++ P +L N GSGGY A ++ + L ++ E K N +
Sbjct: 264 EFLPPPLLKESSSVLAANMEGSGGYHRFAMQYVAENVHNLSFSRDDILYEMKRNANHHVA 323
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRL---PYDFIEIMACPSGCLNGGAQIRN 408
+ G+V +C+A GF++IQN+++ LKRK Y FIE+MACP GCLNGG Q+R+
Sbjct: 324 TSPSNPGEV---YCVAYGFQHIQNIVRGLKRKLASVSSYTFIELMACPDGCLNGGGQVRS 380
Query: 409 EKVASPKETALELETIL 425
+ S ET ++ I
Sbjct: 381 GNLTSNLETIAAVKAIF 397
>gi|401623998|gb|EJS42075.1| nar1p [Saccharomyces arboricola H-6]
Length = 494
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 220/463 (47%), Gaps = 92/463 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P+ C+KP + K + +G Y E + ++L+KV
Sbjct: 1 MSALLSEADLNDFISPALACVKPTQV---------TKAKNNTNGEY--EVSTEPDQLEKV 49
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L+DCLACSGCITS+E +L++ QSH V EN S + K +V+S++ Q
Sbjct: 50 SITLSDCLACSGCITSSEEILLSSQSH----TVFLENWGKL--SQQQDKFLVVSVSPQCR 103
Query: 126 LSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCFSLVELENEFLDRFL 178
LSL + L+ E L FF LG ++ + I + R
Sbjct: 104 LSLAQYYGLTLEAADLCLMNFFHTQFRCKYMLGTEMGRILSINRAVEKIVAHKSQKQRAG 163
Query: 179 SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
+ PL ++ CPG++ Y EK+ + + P + VKSPQQ+ G+L+K E LG+ Y
Sbjct: 164 AERKPLLSAVCPGFLIYTEKTKPQ-LAPMLLNVKSPQQITGALVKNTFKE-LGIESESFY 221
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA------NELAT--TTLQ 290
H+ LMPC+DKKLEASR + + ++CVIT E+ +L + AT TTL
Sbjct: 222 HLALMPCFDKKLEASRPESLADA-----INCVITPREVVTMLQELKLDFHSFATKDTTLY 276
Query: 291 EEKDGILDWP-WDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRNP 348
G L P WD P N GS GGYA+ ++ A+++L PG +V RN
Sbjct: 277 ----GRLSPPGWD---PRVHWASNLGGSCGGYAYQYVA-AMQKLHPGSQMLVLEG--RNS 326
Query: 349 DIREATFTCGDVTLRFCIA--NGFRNIQNLIQKLK--------------RKRL------- 385
DI E D T+ + +GFRNIQNL++KL RKR
Sbjct: 327 DIVEYRLQLSDNTIAAAASELSGFRNIQNLVRKLTSGAGTERKRNITALRKRRVGSSANS 386
Query: 386 ----------------PY--DFIEIMACPSGCLNGGAQIRNEK 410
PY D+IE+ ACP C+NGG + E+
Sbjct: 387 RQMTPASPAIAVAVADPYHSDYIEVNACPGACMNGGGLLNGEQ 429
>gi|154498755|ref|ZP_02037133.1| hypothetical protein BACCAP_02746 [Bacteroides capillosus ATCC
29799]
gi|150272145|gb|EDM99349.1| hydrogenase, Fe-only [Pseudoflavonifractor capillosus ATCC 29799]
Length = 584
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 204/408 (50%), Gaps = 29/408 (7%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+++ DC++C CI + + + Q ++ KV A+ N+ TK +V+ A
Sbjct: 187 DLNEVDCVSCGQCIVACPTGAL--QEKDDTAKVW-------AALNDPTKHVVVGPAPSIR 237
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG F + V K+ +RLG D V DV A F+++E EFL R +GG P
Sbjct: 238 VTLGECFGMPIGTNVEGKMVTALRRLGFDKVFDVDNAADFTIMEEGTEFLHRLQNGGTLP 297
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L TS PGW+ + E+ + + + P +S KSPQQ+ G+L+KT+ AEK+G++P I+ V++M
Sbjct: 298 LITSCSPGWIRFCEQHYPDMV-PNLSSCKSPQQMFGTLVKTYYAEKMGINPRDIFVVSIM 356
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK E R + + G+ VD +T EL ++ A Q DG D
Sbjct: 357 PCTAKKYEVRREEM--RQHGWLPVDVSLTTRELGRMITR--AGLLFQNLPDGEFDEMLGV 412
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTL 362
+ SGG L + + GE +EF +R I+EA++ T+
Sbjct: 413 STGAATIF---GASGGVMEAALRTVVEIVTKGEMKPLEFTEVRGMTGIKEASYDLPGKTV 469
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPK 415
R C+ +G N + ++ +K + YDFIEIMACP GC+NGG Q +RN + S +
Sbjct: 470 RVCVTSGLANAKKVLDGVKSGEMQYDFIEIMACPGGCINGGGQPIQHADVRNWTDIRSLR 529
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
AL + +S EN ++ +YK +LG + +L+T+Y
Sbjct: 530 AKALYTQDEGMTYRRSH--ENPIVQQVYKEYLGEPGGHRAHELLHTTY 575
>gi|323303332|gb|EGA57128.1| Nar1p [Saccharomyces cerevisiae FostersB]
Length = 491
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 230/460 (50%), Gaps = 88/460 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L +DL+DFI P+ C+KP + SG G K + +G Y E + ++L+KV
Sbjct: 1 MSALLSESDLNDFISPALACVKPTQV---SG---GKKDNVNMNGEY--EVSTEPDQLEKV 52
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L+D LACSGCITS+E +L++ QSH +K N K S ++ K +V+S++ Q
Sbjct: 53 SITLSDXLACSGCITSSEEILLSSQSHSVFLK-----NWGKLSQQQD-KFLVVSVSPQCR 106
Query: 126 LSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCFSLV-----ELENEF 173
LSL + L+ E L FF++ +G ++ + I+ + + EN
Sbjct: 107 LSLAQYYGLTLEAADLCLMNFFQKHFQCKYMVGTEMGRIISISKTVEKIIAHKKQKENTG 166
Query: 174 LDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
DR PL ++ CPG++ Y EK+ + + P + VKSPQQ+ GSLI+ E L +
Sbjct: 167 ADR-----KPLLSAVCPGFLIYTEKTKPQ-LAPMLLNVKSPQQITGSLIRATF-ESLAIA 219
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA--NELATTTLQE 291
YH++LMPC+DKKLEASR + + +DCVIT E+ +L N + L E
Sbjct: 220 RESFYHLSLMPCFDKKLEASRPESLXD-----GIDCVITPREIVTMLQELNLDFKSFLTE 274
Query: 292 EKD--GILDWP-WDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPG-ESPVVEFKPLR 346
+ G L P WD P N G+ GGYA+ ++ A+++L PG + V+E R
Sbjct: 275 DTSLYGRLSPPGWD---PRVHWASNLGGTCGGYAYQYVT-AVQRLHPGSQMXVLEG---R 327
Query: 347 NPDIREATFTCGDVTLRFCIA-NGFRNIQNLIQKLK--------------RKRL------ 385
N DI E D + +GFRNIQNL++KL RKR
Sbjct: 328 NSDIVEYRLLHDDRIIAAASELSGFRNIQNLVRKLTSGSGSERKRNITALRKRRTGPKAN 387
Query: 386 -------------PY--DFIEIMACPSGCLNGGAQIRNEK 410
PY D+IE+ ACP C+NGG + E+
Sbjct: 388 SREMAAATAATADPYHSDYIEVNACPGACMNGGGLLNGEQ 427
>gi|66361834|ref|XP_627881.1| narf-like protein nuclear prelamin A recognition factor
[Cryptosporidium parvum Iowa II]
gi|23213133|gb|AAN05787.1| putative Fe-hydrogenase [Cryptosporidium parvum]
gi|46227593|gb|EAK88528.1| narf-like protein nuclear prelamin A recognition factor
[Cryptosporidium parvum Iowa II]
Length = 560
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 222/482 (46%), Gaps = 98/482 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKP-SGPRTGAKIRIQDDGAYIQETNGREEKLKK 64
FS ++L +LDD++ SQ+CI + +K + P+ + G + +G +K
Sbjct: 2 FSTAVKLANLDDYLESSQDCIVSLLSDKDDTKPKIAVMRPAKAQGNKDDKKSGTSDK--- 58
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+++ DCLACSGC+TSAE+ L+ Q+ E M ++++ + V+S++ Q
Sbjct: 59 ATVNVADCLACSGCVTSAEAKLLEDQNVSEFMNILKQ-----------KRLTVVSISNQS 107
Query: 125 VLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
S + KL G FK +G V++ I+ SL+E + EF+ R+ + P
Sbjct: 108 CSSFACHLNCDLITIQRKLSGLFKHIGARFVMNSTISEYISLLETKYEFISRYKAKSDLP 167
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG------------ 231
+ S CPGW+CY+EKS +LP +S+V+S QQ+ G LIKT E
Sbjct: 168 MIISHCPGWICYSEKSLNSSVLPLLSKVRSAQQLQGILIKTLTLEIYNQLLFLYKFRLSN 227
Query: 232 ------------------VHPSHIYHVTLMPCYDKKLE----ASRADFYNEELGYRDVDC 269
V S I+HV +MPC+DKKLE + ++ +VD
Sbjct: 228 SYRTNMNVKSTFTQNDNFVEQSDIFHVAIMPCHDKKLESTRSSLSLKSSDKNSSCPEVDI 287
Query: 270 VITAVELEVLLANELA-TTTLQEEKDGILDWPW--------DEHNPHRMLLVN------- 313
V+ E+ ++ +LA +L + + LD W +HN ++ N
Sbjct: 288 VLATSEVGEII--KLAGFNSLLDVPEAPLDNLWLNQNFQITKKHNLSLLITENYVSNQIL 345
Query: 314 -----------GTGSGGYAHNVLSHAIRQLCP---GESPVVEFKPLRNPDIREATFTCGD 359
+ SGG+ ++ AI++L + F L+N DI EA + +
Sbjct: 346 NQFSWLIPSYFNSNSGGFCEYIIRSAIKELAGDHIDNKVQLPFNKLKN-DILEAKYIKNN 404
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKR---------------LPYDFIEIMACPSGCLNGGA 404
V L +C+A GFR IQ++ +KL ++ + Y IE MACP+GC++GG
Sbjct: 405 VELNYCLAYGFRAIQSISRKLNLQKNASQNTQYKQSVVNHVNYHLIEAMACPTGCVSGGG 464
Query: 405 QI 406
QI
Sbjct: 465 QI 466
>gi|407409966|gb|EKF32588.1| hydrogenase, putative [Trypanosoma cruzi marinkellei]
Length = 474
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/445 (30%), Positives = 213/445 (47%), Gaps = 68/445 (15%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M++S FS L L +D +I PS+ C P +++ + DG + +G E
Sbjct: 1 MSTSNFSASLMLAGMD-YIAPSEACTLPTRLQRGT------------DGWVERHASGNE- 46
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
V+I+L DCLACSGC+T+AE++L+T QS E++KV +++ + ++++
Sbjct: 47 ---VVKITLQDCLACSGCVTTAETILVTSQSRTEIIKV---------RASDPDRPFLVTI 94
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q S+ A + + + GFF+ L V D+ A S+ + E+ R
Sbjct: 95 SDQSAASIAAHLKVDTRRAFHIISGFFRTVLKSQYVSDLRWAQRISVEKTAQEYCHRLQH 154
Query: 180 GGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P+ S CPGWVCY EK G ILP + V SPQ + G K V P +
Sbjct: 155 ARDKLPMIVSACPGWVCYCEK-QGSAILPLLCPVMSPQGIAGCYAKR-------VFP-QL 205
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL 297
H+++ PC+D+KLEA+R + Y D VL EL + E D +
Sbjct: 206 CHISVQPCFDRKLEAARDTSMDGNERYTDF----------VLSTQELMEWMM--ETDASI 253
Query: 298 DW--PWDE----------HNPHRMLLVNGTGSGGYAHNVLSHAIRQL--CPGESPVVEFK 343
W P + +L+ GSGGY + + ++ P + ++
Sbjct: 254 PWEAPLNSSFESLPAPSLKESSSVLVATMEGSGGYHRFAMQYVAEKVHNLPFSPDDILYE 313
Query: 344 PLRNPDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRL---PYDFIEIMACPSGCL 400
RN + AT + + +C+A GF++IQN+++ LKRK Y FIE+MACP GCL
Sbjct: 314 MKRNANHHVAT-SPSNPDEVYCVAYGFQHIQNIVRGLKRKLASVSSYTFIELMACPDGCL 372
Query: 401 NGGAQIRNEKVASPKETALELETIL 425
NGG Q+R+ +AS ET ++TI
Sbjct: 373 NGGGQVRSGNLASNLETIAAVKTIF 397
>gi|281419484|ref|ZP_06250498.1| hydrogenase, Fe-only [Clostridium thermocellum JW20]
gi|281406890|gb|EFB37154.1| hydrogenase, Fe-only [Clostridium thermocellum JW20]
Length = 1149
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 215/415 (51%), Gaps = 25/415 (6%)
Query: 56 NGREEKLKKVEISL--TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT 113
NGR+ K + L TDC++C C+T+ + + E KV+R + N+
Sbjct: 654 NGRQLVGTKSGLPLRDTDCVSCGQCVTACPCAALDYR--RERGKVVR-------AINDPK 704
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
KT+V +A + + F +S+E+ + G K+LG D V D A ++VE EF
Sbjct: 705 KTVVGFVAPAVRSLISSTFGVSYEEASPFMAGLLKKLGFDKVFDFTFAADLTIVEETTEF 764
Query: 174 LDRFLSGG-GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
L R + G P FTS CPGW+ + EK + E I+P++S KSPQ +MG+ +K H A+ +G+
Sbjct: 765 LSRIQNKGVMPQFTSCCPGWINFVEKRYPE-IIPHLSTCKSPQMMMGATVKNHYAKLMGI 823
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEE 292
+ ++ V+++PC KK EA+R +F ++ G RDVD V+T E+ ++ ELA E
Sbjct: 824 NKEDLFVVSIVPCLAKKYEAARPEFIHD--GIRDVDAVLTTTEMLEMM--ELADIKPSEV 879
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE--SPVVEFKPLRNPD- 349
D P+ + + +L SGG A L A+ +L G+ + +EF+ +R +
Sbjct: 880 VPQEFDEPYKQVSGAGILF---GASGGVAEAALRMAVEKLT-GKVLTDHLEFEEIRGFEG 935
Query: 350 IREATFTCGDVTLRFCIANGFRNIQNLIQK-LKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
++E+T +R + +G +N + +I+K L + YD IE+MACP GC+ G
Sbjct: 936 VKESTIDANGTKVRVAVVSGLKNAEPIIEKILNGVDVGYDLIEVMACPGGCICGAGHPVP 995
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
EK+ S ++ L I L + +EN + LY + G ++ +L+T Y
Sbjct: 996 EKIDSLEKRQQVLVNIDKVLKYRKSQENPDILRLYNEFYGEPNSPLAHELLHTHY 1050
>gi|332671079|ref|YP_004454087.1| hydrogenase, Fe-only [Cellulomonas fimi ATCC 484]
gi|332340117|gb|AEE46700.1| hydrogenase, Fe-only [Cellulomonas fimi ATCC 484]
Length = 1088
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 204/407 (50%), Gaps = 34/407 (8%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
+ LTDC++C C+ + + +RE ++ ++ K +V +A
Sbjct: 669 LGLTDCVSCGQCVRACPC---------GALDYVRERGGVFSAMHDPDKVVVGFVAPAVRS 719
Query: 127 SLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLF 185
+ + L+ EQ + G +++G D V D A +++E EFL+R SG P F
Sbjct: 720 VIADHYGLAPEQASGFMAGLMRKVGFDRVFDFAFAADLTILEETTEFLERVGSGERLPQF 779
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CPGWV E+ E I P++S KSPQQ+MG+ +K H AE+ G+ +Y V+++PC
Sbjct: 780 TSCCPGWVNLVERRFPELI-PHLSSCKSPQQMMGATVKRHFAERAGIPVDRLYTVSVVPC 838
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA+R +F + G RDVD V+T EL L E+ + + G D P+ + +
Sbjct: 839 LAKKYEAARPEFAPD--GVRDVDAVLTTTEL--LEMVEMLRLDPADVEPGAFDEPYAQVS 894
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPD-IREATFTCGDVTLR 363
+L SGG A L A+ +L GE P ++ +R + ++EAT G V +R
Sbjct: 895 GAGVLF---GASGGVAEAALRMAVEKLT-GEPPAELDVHAVRGLEGVKEATVAAGGVEVR 950
Query: 364 FCIANGFRNIQNLIQKLKR-KRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET--ALE 420
+ +G N+ L ++++ + + YD IE+MACP GC+NG +P++ +
Sbjct: 951 VAVVSGLGNVDALARRIRDGEDVGYDLIEVMACPGGCVNGAGH------PAPRDAHETVA 1004
Query: 421 LETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ +L D+ ++ P + N + LY G ++ +L+TSY
Sbjct: 1005 RQQVLVDIDRTAPLRRSQANPDVLRLYDECYGEPNSPLAHELLHTSY 1051
>gi|120538591|gb|AAI29941.1| NARFL protein [Homo sapiens]
Length = 233
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/241 (42%), Positives = 137/241 (56%), Gaps = 14/241 (5%)
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD---- 298
MPCYDKKLEASR DF+N+E RDVDCV+T E+ LL E +L + + LD
Sbjct: 1 MPCYDKKLEASRPDFFNQEHQTRDVDCVLTTGEVFRLLEEE--GVSLPDLEPAPLDSLCS 58
Query: 299 -WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC 357
+E HR G GSGGY +V HA R+L V +KPLRN D +E T
Sbjct: 59 GASAEEPTSHR-----GGGSGGYLEHVFRHAARELFGIHVAEVTYKPLRNKDFQEVTLEK 113
Query: 358 -GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G V L F +A GFRNIQNL+Q+LKR R PY ++E+MACPSGCLNGG Q++ S +E
Sbjct: 114 EGQVLLHFAMAYGFRNIQNLVQRLKRGRCPYHYVEVMACPSGCLNGGGQLQAPDRPS-RE 172
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVK 476
+E + + P + ++ LY WL G ++ +L+T YH + K + L ++
Sbjct: 173 LLQHVERLYGMVRAEAPEDAPGVQELYTHWLQGTDSECAGRLLHTQYHAVEKASTGLGIR 232
Query: 477 W 477
W
Sbjct: 233 W 233
>gi|405970245|gb|EKC35171.1| Cytosolic Fe-S cluster assembly factor NARFL [Crassostrea gigas]
Length = 612
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 136/208 (65%), Gaps = 16/208 (7%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDL+DFI PSQEC+KP+ I++ G AKIRI+DDG+Y++ +G E+K
Sbjct: 2 ASNFSGALQLTDLNDFITPSQECVKPVKIDRKPGKV--AKIRIEDDGSYMEVAESGEEKK 59
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIREN-NAHKASSNENTKTIVLSL 120
L+K +I+L DCLACSGCITSAESVLITQQS EE+ V++EN +AS + K +V+S+
Sbjct: 60 LQKAQITLNDCLACSGCITSAESVLITQQSQEELYNVLQENLRLQQASEVDKKKLVVVSI 119
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ Q SL K+ LS ++ KL GFFK+LGV V D + FSL+E EF+ R+
Sbjct: 120 SPQSRASLATKYQLSPQEAHHKLTGFFKKLGVHHVFDTSFSRNFSLLESCREFVRRYYES 179
Query: 181 -----GGPLFTSECPGWVCYAEKSHGEF 203
P+ S CP +S+G+F
Sbjct: 180 ETNKTALPMLASSCP-------ESNGQF 200
>gi|407849363|gb|EKG04128.1| hydrogenase, putative [Trypanosoma cruzi]
Length = 474
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 136/438 (31%), Positives = 216/438 (49%), Gaps = 54/438 (12%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M++S FS L L +D +I PS+ C P +++ GA DG+ + +G E
Sbjct: 1 MSTSNFSASLMLAGMD-YIAPSEACTLPTRLQR------GA------DGSVQRHASGNE- 46
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
V+I+L DCLACSGC+T+AE++L+T QS E++KV ++E + ++++
Sbjct: 47 ---VVKITLQDCLACSGCVTTAETILVTSQSRAEIIKV---------RASELDRPFLVTI 94
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q S+ A + + + GFF+ L V D+ A S+ + E+ R
Sbjct: 95 SDQSAASIAAHLKVDSRRAFHIISGFFRTVLKSQYVSDLRWAQHISVEKTAQEYCHRLQH 154
Query: 180 GGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P+ S CPGWVCY EK G ILP + V SPQ + G K V P +
Sbjct: 155 ARDKLPMIVSACPGWVCYCEK-QGSAILPLLCPVMSPQGIAGCYAKR-------VFP-QL 205
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL 297
H+++ PC+D+KLEA+R + Y D V++ EL + A+ + +
Sbjct: 206 CHISVQPCFDRKLEAARDTSIDGNERYTDF--VLSTQELMEWMMETDASIPWEAPLNSSF 263
Query: 298 DW---PWDEHNPHRMLLVNGTGSGGY---AHNVLSHAIRQLCPGESPVV-EFKPLRNPDI 350
++ P + + +L GSGGY A ++ + L ++ E K N +
Sbjct: 264 EFLPAPLLKES-SSVLAATMEGSGGYHRFAMQYVAENVHNLSFSPDDILYEMKRNANHHV 322
Query: 351 REATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRL---PYDFIEIMACPSGCLNGGAQIR 407
+ G+V +C+A GF++IQN+++ LKRK Y FIE+MACP GCLNGG Q+R
Sbjct: 323 ATSPSNPGEV---YCVAYGFQHIQNIVRGLKRKLASVSSYTFIELMACPDGCLNGGGQVR 379
Query: 408 NEKVASPKETALELETIL 425
+ + S ET ++ I
Sbjct: 380 SGNLTSNLETIAAVKAIF 397
>gi|67594873|ref|XP_665926.1| Fe-hydrogenase [Cryptosporidium hominis TU502]
gi|54656799|gb|EAL35695.1| Fe-hydrogenase [Cryptosporidium hominis]
Length = 560
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 226/484 (46%), Gaps = 102/484 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIR---IQDDGAYIQETNGREEKL 62
FS ++L +LDD++ SQ+CI + +K A +R QD+ + + +
Sbjct: 2 FSTAVKLANLDDYLESSQDCIVSLLSDKDDTKPKIAVMRPAKAQDN-----KDDKKSGTS 56
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
K +++ DCLACSGC+TSAE+ L+ Q+ E M ++++ + V+S++
Sbjct: 57 DKATVNVADCLACSGCVTSAEAKLLEDQNVSEFMNILKQ-----------KRLTVVSISN 105
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
Q S + KL G FK +G V++ I+ SL+E + EF+ R+ +
Sbjct: 106 QSCSSFACHLNCDLITIQRKLSGLFKHIGARFVMNSTISEYISLLETKYEFISRYKAKSD 165
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT---------------HL 226
P+ S CPGW+CY+EKS +LP +S+V+S QQ+ G LIKT L
Sbjct: 166 LPMIISHCPGWICYSEKSLNSSVLPLLSKVRSAQQLQGILIKTLTLEIYNQLLFLYKFRL 225
Query: 227 AEKLG---------------VHPSHIYHVTLMPCYDKKLEASRADFY----NEELGYRDV 267
+ G V S I+HV +MPC+DKKLE++R+ ++ +V
Sbjct: 226 SNSYGTNMNIKTTFTQNDDFVEQSDIFHVAIMPCHDKKLESTRSSLSLKSSDKNSSCPEV 285
Query: 268 DCVITAVELEVLLANELA-TTTLQEEKDGILDWPW--------DEHNPHRMLLVN----- 313
D V+ E+ ++ +LA +L + + LD W +HN ++ N
Sbjct: 286 DIVLATSEVGEII--KLAGFNSLLDVPEAPLDNLWLNQNFQITKKHNLSLLITENYVSNQ 343
Query: 314 -------------GTGSGGYAHNVLSHAIRQLCPGE---SPVVEFKPLRNPDIREATFTC 357
+ SGG+ ++ AI++L + F L+N DI EA +
Sbjct: 344 ILNQFPWLIPSYFNSNSGGFCEYIIRSAIKELAGDNIDNKVQLPFNKLKN-DILEAKYIK 402
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKR---------------LPYDFIEIMACPSGCLNG 402
+V L +C+ GFR IQ++ +KL ++ + Y IE MACP+GC++G
Sbjct: 403 NNVELNYCLVYGFRAIQSISRKLNLQKNASQHTQYKQNVVNHVNYHLIEAMACPTGCVSG 462
Query: 403 GAQI 406
G QI
Sbjct: 463 GGQI 466
>gi|421074329|ref|ZP_15535365.1| hydrogenase, Fe-only [Pelosinus fermentans JBW45]
gi|392527556|gb|EIW50646.1| hydrogenase, Fe-only [Pelosinus fermentans JBW45]
Length = 574
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 188/371 (50%), Gaps = 37/371 (9%)
Query: 110 NENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVE 168
++ +K +V+ A ++LG L +V K+ +RLG D V D + +++E
Sbjct: 220 SDPSKHVVVQTAPAVRVALGEALDLPQGTIVTGKMVAALRRLGFDRVFDTNFSADLTIME 279
Query: 169 LENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA 227
E LDR +GG P+ TS PGWV +AE + + +L ++S KSPQQ+ G+L+KT+ A
Sbjct: 280 EGFELLDRLKNGGKLPMITSCSPGWVNFAELKYPD-LLEHLSTAKSPQQMFGALVKTYYA 338
Query: 228 EKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATT 287
EK G+ P I V +MPC KK EA R +F + GY+DVD V+T EL ++
Sbjct: 339 EKAGIDPKDIISVAVMPCTAKKAEAGREEFRSS--GYQDVDYVLTTSELAMM-------- 388
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEF 342
++E+ P +E++ M + G G +GG L + E ++F
Sbjct: 389 -IREQGLNFNALPSEEYDAP-MGISTGAGVIFGATGGVMEAALRTVYEVVTGKELECIDF 446
Query: 343 KPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLN 401
K +R + I+EA GD+T++ +A+ N + L++K+++ Y FIEIMACP GC+
Sbjct: 447 KTVRGLEGIKEAEVQVGDLTIKVAVAHTLSNAKILMEKVRKGEADYHFIEIMACPGGCIG 506
Query: 402 GGAQIRNEKVASPKETALELE------TILCDLAKS--EPRENATLEHLYKAWLGGKSTD 453
G Q P A EL CD A + + +N + LY WLG +
Sbjct: 507 GAGQ--------PIVMATELRQKRIDAIYQCDTANTMRKSHQNPAVTELYDTWLGEPLGE 558
Query: 454 KGKHMLNTSYH 464
K H+L+T YH
Sbjct: 559 KSHHLLHTHYH 569
>gi|302389352|ref|YP_003825173.1| hydrogenase, Fe-only [Thermosediminibacter oceani DSM 16646]
gi|302199980|gb|ADL07550.1| hydrogenase, Fe-only [Thermosediminibacter oceani DSM 16646]
Length = 426
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 209/402 (51%), Gaps = 30/402 (7%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL--SLG 129
C+ C C+ + + +S E +K E++ +I+ + P + +LG
Sbjct: 41 CVNCGQCVVTCPAGAARDRSDLERVKEALEDD-----------SIIKVVQSAPAMRVTLG 89
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F + +V ++ F+++G D V D A +++E +EFL+R GG P+FTS
Sbjct: 90 EEFGMEPGTIVPGRMASAFRKMGFDRVYDTCFAADLTVMEEGHEFLERMEKGGPFPMFTS 149
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV + EK++ + + ++S KSPQQ+ G+++K ++AEK G+ P+ I+ ++ MPC
Sbjct: 150 CCPAWVFFMEKNYPDLVH-HLSSCKSPQQMFGAVVKAYMAEKEGIDPARIFMLSAMPCTA 208
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWPWDEHNP 306
KK EA+R++ + G RDVD V+T EL L+ + +L L EE D P+ E+
Sbjct: 209 KKFEAARSEMNSS--GARDVDAVLTTRELAQLIKDRQLELADLPEED---FDIPFGEYTG 263
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
L GT SGG L ++L + F+PLR REA G+ ++
Sbjct: 264 AGALF--GT-SGGVMEAALRTVAKKLTGKPLKSIAFEPLRKGGAFREAVIDIGNKKVKIA 320
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETIL 425
+ +G +NI +++++++ Y FIE+M CP GC+ GG Q R K + ++T + + L
Sbjct: 321 VVHGLKNIIPVLEEIRKGNSDYHFIEVMTCPDGCIGGGGQPRIPKRSLRQKTVRKRKEAL 380
Query: 426 ----CDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L K E +N +++ LY +LG ++K +L+ +
Sbjct: 381 YFYELGLPKIEAGDNPSIKALYAEFLGRPLSEKSHELLHVVH 422
>gi|209880018|ref|XP_002141449.1| nuclear prelamin A recognition factor-like protein [Cryptosporidium
muris RN66]
gi|209557055|gb|EEA07100.1| nuclear prelamin A recognition factor-like protein, putative
[Cryptosporidium muris RN66]
Length = 584
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 226/508 (44%), Gaps = 126/508 (24%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAY-------IQETNGR 58
FS L++ DLDDF+ +Q+C+KP+ S T K + +Y +TN R
Sbjct: 2 FSTALKIGDLDDFLQLTQDCVKPLL----SSGNTSIKPDLIKQSSYKKKRQEEYNDTNSR 57
Query: 59 --EEKLKK------VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN 110
E + K +++ DCL CSGC+T+AE++L+ + E +K ++
Sbjct: 58 YNEAYISKDGSKYAATVNVVDCLTCSGCVTAAETILLQHHNTNEFLKNVKLK-------- 109
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELE 170
K ++S+ Q + + + + + +LCG FK LG V++ ++ SL+E +
Sbjct: 110 ---KLTIVSICNQSCAAFASLLNIHPVEAMMRLCGLFKYLGAKYVINSTLSEFVSLLEAK 166
Query: 171 NEFLDRFLSGGG---PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT--- 224
EF+ R+ G P+ S CPGWVCYAEK+ ++P +SRV+S QQ+ G L+K
Sbjct: 167 EEFIFRYKYKDGQNIPVIVSHCPGWVCYAEKTLDPSVIPMLSRVRSSQQIQGVLVKNLTC 226
Query: 225 -----------------------HLAEKLGVHPSH-IYHVTLMPCYDKKLEASRADFYNE 260
+AE+ H +YHV + PCYDKKLE+ R+
Sbjct: 227 FAHNSKVLLYKWKQIWSYSMKIKQIAEQFDFVEQHELYHVCIAPCYDKKLESVRSYLPTS 286
Query: 261 ELG--YRDVDCVITAVELEVLLA-----------------------------------NE 283
+ +VD V+ VE++ L+ NE
Sbjct: 287 TINSDILEVDTVLATVEIQDLIKSSGFNSLLDIPKRDLDNLWLDLDFIINMNSSVGQNNE 346
Query: 284 LATTTLQEEKD---------GILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCP 334
++ T++ D I++ +N + +GSGGY + ++ +L
Sbjct: 347 ISDLTIENSADLKCIQATCSDIINGK--RNNTWLLPSYYNSGSGGYCEYIFRSSVMELFN 404
Query: 335 GESP---VVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKR------ 384
E P +E+ N I + F +V L+F I NGFR IQ +++KL +R
Sbjct: 405 VEIPKDTTLEYTH-DNSGILQICFKIKNEVKLKFGIVNGFRAIQGVVKKLDIRRKEDSTE 463
Query: 385 LP-------YDFIEIMACPSGCLNGGAQ 405
+P + ++EIMACPSGC +GG Q
Sbjct: 464 VPQKSAKDTFHYLEIMACPSGCTSGGGQ 491
>gi|291521599|emb|CBK79892.1| hydrogenases, Fe-only [Coprococcus catus GD/7]
Length = 581
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 198/412 (48%), Gaps = 35/412 (8%)
Query: 65 VEISLTDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
++++ T C++C CI + L + + +E+ + I + + K +V+ A
Sbjct: 185 MDLADTSCVSCGQCIAVCPTGALHEKDNTDEIFEAIADPD----------KYVVVQTAPS 234
Query: 124 PVLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
LG +F V K+ +RLG D V D A +++E +EFLDR +GG
Sbjct: 235 VRAGLGEEFGYPMGTDVEGKMVAALRRLGFDKVFDTDFAADLTIMEEAHEFLDRVQNGGK 294
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
PL TS PGW+ Y E + + +S KSPQQ+ G+ +KT+ AEK+G+ P I V+
Sbjct: 295 LPLITSCSPGWIKYCEHYFPD-MTENLSSCKSPQQMFGATLKTYYAEKMGIDPKKIVSVS 353
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK E R D + G DVD IT EL ++ E D D P
Sbjct: 354 VMPCTAKKFEIGRDD--EDAAGVPDVDIAITTRELARMIKK--VGIMFTELPDEEFDSPL 409
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDV 360
E ++ +GG L A+ L E VEF+ +R + I+EAT+ +
Sbjct: 410 GESTGAAVIF---GATGGVMEAALRTAVETLTGEELKNVEFQEVRGTEGIKEATYNVAGM 466
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVAS 413
++ +A+G N + L+ K+K Y FIEIM CP GC+NGG Q +RN V +
Sbjct: 467 DVKVAVASGLGNARKLLDKVKSGEADYHFIEIMGCPGGCVNGGGQPQVRGSVRNFTDVRA 526
Query: 414 PKETALELETILCDLAKS--EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ AL D AKS + EN ++ LYK + G + K +L+TSY
Sbjct: 527 IRAKALYDN----DAAKSIRKSHENPAIQQLYKEFFGEPGSHKAHEILHTSY 574
>gi|256004229|ref|ZP_05429212.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 2360]
gi|385777924|ref|YP_005687089.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 1313]
gi|419721959|ref|ZP_14249111.1| hydrogenase, Fe-only [Clostridium thermocellum AD2]
gi|419727017|ref|ZP_14254027.1| hydrogenase, Fe-only [Clostridium thermocellum YS]
gi|255991819|gb|EEU01918.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 2360]
gi|316939604|gb|ADU73638.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 1313]
gi|380769603|gb|EIC03513.1| hydrogenase, Fe-only [Clostridium thermocellum YS]
gi|380781998|gb|EIC11644.1| hydrogenase, Fe-only [Clostridium thermocellum AD2]
Length = 1149
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 213/415 (51%), Gaps = 25/415 (6%)
Query: 56 NGREEKLKKVEISL--TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT 113
NGR+ K + L TDC++C C+T+ + + E KV+R + N+
Sbjct: 654 NGRQLVGTKSGLPLRDTDCVSCGQCVTACPCAALDYR--RERGKVVR-------AINDPK 704
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
KT+V +A + F +S+E+ + G K+LG D V D A ++VE EF
Sbjct: 705 KTVVGFVAPAVRSLISNTFGVSYEEASPFMAGLLKKLGFDKVFDFTFAADLTIVEETTEF 764
Query: 174 LDRFLSGG-GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
L R + G P FTS CPGW+ + EK + E I+P++S KSPQ +MG+ +K H A+ +G+
Sbjct: 765 LSRIQNKGVMPQFTSCCPGWINFVEKRYPE-IIPHLSTCKSPQMMMGATVKNHYAKLMGI 823
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEE 292
+ ++ V+++PC KK EA+R +F ++ G RDVD V+T E+ ++ ELA E
Sbjct: 824 NKEDLFVVSIVPCLAKKYEAARPEFIHD--GIRDVDAVLTTTEMLEMM--ELADIKPSEV 879
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE--SPVVEFKPLRNPD- 349
D P+ + + +L SGG A L A+ +L G+ + +EF+ +R +
Sbjct: 880 VPQEFDEPYKQVSGAGILF---GASGGVAEAALRMAVEKLT-GKVLTDHLEFEEIRGFEG 935
Query: 350 IREATFTCGDVTLRFCIANGFRNIQNLIQK-LKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
++E+T +R + +G +N + +I+K L + YD IE+MACP GC+ G
Sbjct: 936 VKESTIDVNGTKVRVAVVSGLKNAEPIIEKILNGVDVGYDLIEVMACPGGCICGAGHPVP 995
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
EK+ S ++ L I + +EN + LY + G ++ +L+T Y
Sbjct: 996 EKIDSLEKRQQVLVNIDKVSKYRKSQENPDILRLYNEFYGEPNSPLAHELLHTHY 1050
>gi|125975482|ref|YP_001039392.1| hydrogenase, Fe-only [Clostridium thermocellum ATCC 27405]
gi|125715707|gb|ABN54199.1| hydrogenase, Fe-only [Clostridium thermocellum ATCC 27405]
Length = 644
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 213/415 (51%), Gaps = 25/415 (6%)
Query: 56 NGREEKLKKVEISL--TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT 113
NGR+ K + L TDC++C C+T+ + + E KV+R + N+
Sbjct: 149 NGRQLVGTKSGLPLRDTDCVSCGQCVTACPCAALDYR--RERGKVVR-------AINDPK 199
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
KT+V +A + F +S+E+ + G K+LG D V D A ++VE EF
Sbjct: 200 KTVVGFVAPAVRSLISNTFGVSYEEASPFMAGLLKKLGFDKVFDFTFAADLTIVEETTEF 259
Query: 174 LDRFLSGG-GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
L R + G P FTS CPGW+ + EK + E I+P++S KSPQ +MG+ +K H A+ +G+
Sbjct: 260 LSRIQNKGVMPQFTSCCPGWINFVEKRYPE-IIPHLSTCKSPQMMMGATVKNHYAKLMGI 318
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEE 292
+ ++ V+++PC KK EA+R +F ++ G RDVD V+T E+ ++ ELA E
Sbjct: 319 NKEDLFVVSIVPCLAKKYEAARPEFIHD--GIRDVDAVLTTTEMLEMM--ELADIKPSEV 374
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE--SPVVEFKPLRNPD- 349
D P+ + + +L SGG A L A+ +L G+ + +EF+ +R +
Sbjct: 375 VPQEFDEPYKQVSGAGILF---GASGGVAEAALRMAVEKLT-GKVLTDHLEFEEIRGFEG 430
Query: 350 IREATFTCGDVTLRFCIANGFRNIQNLIQK-LKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
++E+T +R + +G +N + +I+K L + YD IE+MACP GC+ G
Sbjct: 431 VKESTIDVNGTKVRVAVVSGLKNAEPIIEKILNGVDVGYDLIEVMACPGGCICGAGHPVP 490
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
EK+ S ++ L I + +EN + LY + G ++ +L+T Y
Sbjct: 491 EKIDSLEKRQQVLVNIDKVSKYRKSQENPDILRLYNEFYGEPNSPLAHELLHTHY 545
>gi|71415644|ref|XP_809882.1| hydrogenase [Trypanosoma cruzi strain CL Brener]
gi|70874330|gb|EAN88031.1| hydrogenase, putative [Trypanosoma cruzi]
Length = 474
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 142/449 (31%), Positives = 214/449 (47%), Gaps = 76/449 (16%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M++S FS L L +D +I PS+ C P +++ GA +Q + +G E
Sbjct: 1 MSTSNFSASLMLAGMD-YIAPSEACTLPTRLQR------GADSSVQ------RHASGNE- 46
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
V+I+L DCLACSGC+T+AE++L+T QS E++KV +++ + ++++
Sbjct: 47 ---VVKITLQDCLACSGCVTTAETILVTSQSRAEIIKVC---------ASDLDRPFLVTI 94
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q S+ A + + + GFF+ L V D+ A S+ + E+ R
Sbjct: 95 SDQSAASIAAHLKVDSRRAFHIISGFFRTVLKSQYVSDLRWAQHISVEKTAQEYCHRLQH 154
Query: 180 GGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P+ S CPGWVCY EK G ILP + V SPQ + G K V P +
Sbjct: 155 ARDKLPMIVSACPGWVCYCEK-QGSAILPLLCPVMSPQGIAGCYAKR-------VFP-QL 205
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL 297
H+++ PC+D+KLEA+R + Y D VL EL + E D +
Sbjct: 206 CHISVQPCFDRKLEAARDTSIDGNERYTDF----------VLSTQELMEWMM--ETDASI 253
Query: 298 DW--PWDE----------HNPHRMLLVNGTGSGGY---AHNVLSHAIRQLCPGESPVVEF 342
W P + +L GSGGY A ++ + L SPV F
Sbjct: 254 PWEAPLNSSFESLSAPSLKESSSVLAATMEGSGGYHRFAMQYVAENVHNL--SFSPVDIF 311
Query: 343 KPL-RNPDIREATFTC--GDVTLRFCIANGFRNIQNLIQKLKRKRL---PYDFIEIMACP 396
+ RN + AT G+V +C+A GF++IQN+++ LKRK Y FIE+MACP
Sbjct: 312 YEMKRNANHHVATSPSNPGEV---YCVAYGFQHIQNIVRGLKRKLASVSSYTFIELMACP 368
Query: 397 SGCLNGGAQIRNEKVASPKETALELETIL 425
GCLNGG Q+R+ + S ET ++ I
Sbjct: 369 DGCLNGGGQVRSGNLTSNLETIAAVKAIF 397
>gi|50307899|ref|XP_453943.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|52788265|sp|P53998.2|NAR1_KLULA RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|49643077|emb|CAH01039.1| KLLA0D19833p [Kluyveromyces lactis]
Length = 469
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 212/454 (46%), Gaps = 82/454 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L+ DL+DFI P C+KP +K ++ ++ E + +KV
Sbjct: 1 MSALLRDADLNDFISPGLACVKPAQPQK-----------VEKKPSFEVEVGIESSEPEKV 49
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
ISL DCLAC+GCITS+E +L+++QSH KV E + +E +++ +S++ Q
Sbjct: 50 SISLQDCLACAGCITSSEEILLSKQSH----KVFLEKWSELEELDE--RSLAVSISPQCR 103
Query: 126 LSLGAKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL 184
LSL +++ + F K + V+ S+ + DR GPL
Sbjct: 104 LSLADYYSMCLADLDRCFQNFMKTKFNAKYVVGTQFGRSISISRINATLKDRVPENEGPL 163
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
S CPG+V YAEK+ E I P++ VKSPQQ+ G+L+K P+ YH+++MP
Sbjct: 164 LCSVCPGFVLYAEKTKPELI-PHMLDVKSPQQITGNLLKQ-------ADPT-CYHLSIMP 214
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILD----- 298
C+DKKLEASR E ++VDCVIT E +L + + + E D +
Sbjct: 215 CFDKKLEASR------EECEKEVDCVITPKEFVAMLGDLSIDFKSYMTEYDSSKELCPSG 268
Query: 299 WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCG 358
W + H L G+ SGGYA+ L Q ES ++ + +N D+ E
Sbjct: 269 WDYKLH----WLSNEGSSSGGYAYQYLLSL--QSSNPESDIITIEG-KNSDVTEYRLVSK 321
Query: 359 D--VTLRFCIANGFRNIQNLIQKL-----------KRKR--------------------- 384
V GFRNIQNL++KL K KR
Sbjct: 322 SKGVIASSSEVYGFRNIQNLVRKLSQSASVKKRGIKVKRRGQSVLKSGETSEKTTKVLTA 381
Query: 385 --LPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
DF+E+MACPSGC+NGG + EK A+ ++
Sbjct: 382 DPAKTDFVEVMACPSGCINGGGLLNEEKNANRRK 415
>gi|206895600|ref|YP_002246551.1| hydrogenase [Coprothermobacter proteolyticus DSM 5265]
gi|206738217|gb|ACI17295.1| hydrogenase [Coprothermobacter proteolyticus DSM 5265]
Length = 581
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 206/417 (49%), Gaps = 41/417 (9%)
Query: 67 ISLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+SL D C++C CIT+ + + ++ H + +V R + + K +V+ A
Sbjct: 184 VSLNDSPCISCGQCITACPTGALYEKDH--IQRVYR-------ALADKRKHVVVQTAPAV 234
Query: 125 VLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
++LG +F + +V K+ +RLG ++V D +++E +E ++R GG
Sbjct: 235 RVALGEEFGMPVGSIVTGKMVAALRRLGFEVVFDTDFGADLTIMEEGSELIERLKYGGKL 294
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ TS PGW+ + EK + +F+ +S KSP ++G+LIKT+ AEK+G +P +Y V++
Sbjct: 295 PMITSCSPGWINFCEKYYPDFV-ENLSTCKSPHMMLGALIKTYYAEKMGWNPEDVYVVSV 353
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK+E R + N G +DVD V+T EL ++ +E ++ P +
Sbjct: 354 MPCTAKKVEIERPE--NMHDGLQDVDAVLTTRELARMI---------KEAGIDFVNLPDE 402
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IREA 353
E + + G V+ A+R + S +VE KPL D +REA
Sbjct: 403 EFDQPLGMSTGAAVIFGATGGVMEAALRTV----SEIVEGKPLDKIDFEEVRGLDGVREA 458
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI---RNEK 410
T T + L+ I NG N + L+ K++ Y FIEIM CP GC+ GG Q NE
Sbjct: 459 TVTVDGLDLKLAIVNGTGNAKKLLDKIRSGEAEYHFIEIMGCPGGCITGGGQPIHHPNEM 518
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
K A + +L + EN ++ +Y+ +LG +K H+L+T Y + P
Sbjct: 519 AEVRKLRAAAIYQADKNLPLRKSHENPAIKQIYEEYLGHPLGEKSHHLLHTHYSSKP 575
>gi|365127355|ref|ZP_09339980.1| hydrogenase, Fe-only [Subdoligranulum sp. 4_3_54A2FAA]
gi|363624567|gb|EHL75636.1| hydrogenase, Fe-only [Subdoligranulum sp. 4_3_54A2FAA]
Length = 582
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 196/404 (48%), Gaps = 31/404 (7%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C++C CIT + +T++ +V +R+ + H +V+ A +LG
Sbjct: 191 CVSCGQCITVCPTGALTEKDDTAKVWTALRDPSKH----------VVVQPAPSVRATLGE 240
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
F + V K+ +RLG D V D A F+++E EF+ R +GG PL TS
Sbjct: 241 CFGMPIGTNVEGKMVAALRRLGFDGVFDTDTAADFTIMEEATEFVQRVKNGGTLPLITSC 300
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGWV + E + + I P +S KSPQQ+ G+L KT+ AEK+G+ P I V++MPC K
Sbjct: 301 SPGWVKFCETYYPDMI-PNLSSCKSPQQMFGALTKTYYAEKMGLDPHDIVCVSVMPCTAK 359
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K E R D DVD IT EL ++ E A E D D E
Sbjct: 360 KFEIGRDDMSAAGDNIPDVDISITTRELGRMI--ERAGIKFTELPDEDFDPALGESTGAA 417
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCPGES-PVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
+ +GG L A+ +L GE+ VEF +R D I+EA++ G + L C+
Sbjct: 418 TIF---GATGGVMEAALRTAV-ELVTGETLEKVEFHDVRGTDGIKEASYDVGGLHLNVCV 473
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKETAL 419
A+G N +++ ++ YDFIE MACP GC+NGG Q +RN + + + AL
Sbjct: 474 ASGLTNCDAVLKAVQSGEKHYDFIEFMACPGGCVNGGGQPTQPASVRNFTDLKALRAAAL 533
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E + KS EN L+ +Y +LG K H+L+TSY
Sbjct: 534 YGEDDAKAIRKS--HENPLLKKVYAEYLGEPGGHKAHHILHTSY 575
>gi|5538|emb|CAA49833.1| LET1 [Kluyveromyces lactis]
Length = 469
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 142/454 (31%), Positives = 212/454 (46%), Gaps = 82/454 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L+ DL+DFI P C+KP +K ++ ++ E + +KV
Sbjct: 1 MSALLRDADLNDFISPGLACVKPAQPQK-----------VEKKPSFEVEVGIESSEPEKV 49
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
ISL DCLAC+GCITS+E +L+++QSH KV E + +E +++ +S++ Q
Sbjct: 50 SISLQDCLACAGCITSSEEILLSKQSH----KVFLEKWSELEELDE--RSLAVSISPQCR 103
Query: 126 LSLGAKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL 184
LSL +++ + F K + V+ S+ + DR GPL
Sbjct: 104 LSLADYYSMCLADLDRCFQNFMKTKFNAKYVVGTQFGRSISISRINATLKDRVPENEGPL 163
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
S CPG+V YAEK+ E I P++ VKSPQQ+ G+L+K P+ YH+++MP
Sbjct: 164 LCSVCPGFVLYAEKTKPELI-PHMLDVKSPQQITGNLLKQ-------ADPT-CYHLSIMP 214
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILD----- 298
C+DKKLEASR E ++VDCVIT + +L + + + E D +
Sbjct: 215 CFDKKLEASR------EECEKEVDCVITPKQFVAMLGDLSIDFKSYMTEYDSSKELCPSG 268
Query: 299 WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCG 358
W + H L G+ SGGYA+ L Q ES ++ + +N D+ E
Sbjct: 269 WDYKLH----WLSNEGSSSGGYAYQYLLSL--QSSNPESDIITIEG-KNSDVTEYRLVSK 321
Query: 359 D--VTLRFCIANGFRNIQNLIQKL-----------KRKR--------------------- 384
V GFRNIQNL++KL K KR
Sbjct: 322 SKGVIASSSEVYGFRNIQNLVRKLSQSASVKKRGIKVKRRGQSVLKSGETSEKTTKVLTA 381
Query: 385 --LPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
DF+E+MACPSGC+NGG + EK A+ ++
Sbjct: 382 DPAKTDFVEVMACPSGCINGGGLLNEEKNANRRK 415
>gi|355674710|ref|ZP_09059704.1| hypothetical protein HMPREF9469_02741 [Clostridium citroniae
WAL-17108]
gi|354813811|gb|EHE98416.1| hypothetical protein HMPREF9469_02741 [Clostridium citroniae
WAL-17108]
Length = 596
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 201/423 (47%), Gaps = 41/423 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHE-EVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + +T++ + +V I + H +++ A L
Sbjct: 189 TSCVSCGQCIAVCPTGALTEKDYTGDVFAAIADPAKH----------VIVQTAPAVRAGL 238
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F L V K+ +RLG D V D + +++E +EFLDR +GG PL T
Sbjct: 239 GEEFGLPIGTDVEGKMAAALRRLGFDKVFDTNFSADLTIMEEAHEFLDRVQNGGVLPLIT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV Y E + + +S KSPQQ+ G++ K++ AEK G+ P +I V++MPC
Sbjct: 299 SCSPGWVKYCEHYFPD-MTENLSSCKSPQQMFGAIAKSYYAEKAGIDPKNIVSVSVMPCT 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI--LDWPWDEH 304
KK E R D + G DVD IT EL ++ +K GI LD P DE
Sbjct: 358 AKKFEIGRDD--QDANGVPDVDISITTRELARMI-----------KKSGIRFLDLP-DEK 403
Query: 305 NPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCG 358
+ L G +GG L A+ L E P ++F+ +R I+EAT+
Sbjct: 404 FDDPLGLGTGAAVIFGATGGVMEAALRTAVETLTGEELPKLDFEEVRGTKGIKEATYNVA 463
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+ ++ +A+G N + L++K+K Y FIEIM CP GC+NGG Q +
Sbjct: 464 GMDVKVAVASGLGNAKELLEKVKSGEADYHFIEIMGCPGGCVNGGGQPQQPGYVRNTTDI 523
Query: 419 LELET-ILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIAL 473
L +L ++ + P EN ++ LY +LG +++ H+L+T+Y N +
Sbjct: 524 RGLRAKVLYNIDSANPIRKSHENPAIKELYSTYLGEPGSERAHHLLHTTYVKRTINKKIV 583
Query: 474 NVK 476
N K
Sbjct: 584 NEK 586
>gi|294872512|ref|XP_002766308.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239867065|gb|EEQ99025.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 472
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 220/467 (47%), Gaps = 80/467 (17%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIP--IEKPSGPRTGAKIRIQDDGAYIQETNGREEK 61
S FSGV++L DLDDFI PS EC+ P+ +EK ++R Q + E +
Sbjct: 2 SGFSGVVKLADLDDFISPSTECVIPLAGALEKSKHEEATGEVRPQLIRSKKAEEKTTGQT 61
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT--KTIVLS 119
++SL+DCLACSGC+TSAE++L+T+QS + +++ + A + S+E +V+S
Sbjct: 62 ATIAQVSLSDCLACSGCVTSAETILLTEQSTDALLQRL---GAKSSDSSEEALPAEVVVS 118
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDL------------VLDVGIAHCFSLV 167
+ SL F +S E+V L ++L + L L+ ++ +LV
Sbjct: 119 VTGPSRTSLSQYFNISPEKVAPALGEALRQLELKLQEKDDINLPRISCLNTSVSEAVALV 178
Query: 168 ----ELENEFLDRFLSGGGP--LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSL 221
E + D G P TS CPGW CYAEKS + +S V+S +Q+ G
Sbjct: 179 LTREEAKRRKDDAERKGLPPKAFLTSHCPGWTCYAEKSLDADTVELLSNVRSAEQIQGLY 238
Query: 222 IK-----------------THLAEKLGVHPS-----HIYHVTLMPCYDKKLEASRADFY- 258
+K T+L+ + S IYHV + PC+D+KLE R ++
Sbjct: 239 VKSVIPHFRQIVAYRGFWDTYLSRIMLPKSSSSSLRRIYHVLVSPCFDRKLEVLRPNYRI 298
Query: 259 ----NEELGYRDVDCVITAVELEVLLAN---ELATTTLQEEKDGILDWPWDEHNPHRMLL 311
+ G +D V+ E+ LL N L+ T E + +L R +
Sbjct: 299 KSASDSTDGVPSIDLVLGTSEIVSLLKNYDLHLSKFTNAEPTNDLL------MCGSRCFV 352
Query: 312 VNGTGS--GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRFCIANG 369
G S GGYA L A E P ++ ++N D+ + A G
Sbjct: 353 PFGDSSECGGYARGELQVA-------EDP--KWISVKNQDLTHIG--------KVARAYG 395
Query: 370 FRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
FRN+QN+++K+ ++ YDF+E+MACP GC NGGAQ+ + +A K+
Sbjct: 396 FRNVQNIVRKVNKRGFDYDFVEVMACPGGCGNGGAQVIPDTIAEEKD 442
>gi|325262533|ref|ZP_08129270.1| putative [Fe] hydrogenase, large subunit HymC [Clostridium sp. D5]
gi|324032365|gb|EGB93643.1| putative [Fe] hydrogenase, large subunit HymC [Clostridium sp. D5]
Length = 580
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 200/405 (49%), Gaps = 31/405 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CIT+ + + ++ ++V+ I + + H +++ A +L
Sbjct: 190 TSCVSCGQCITACPTGALYEKDFIDDVLAAIADESKH----------VIVQPAPSVRAAL 239
Query: 129 GAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F V K+ +R+G D V D + +++E +EFL R +GG P+ T
Sbjct: 240 GEEFGYPMGTDVEGKMAAALRRIGFDKVFDTDFSADLTIMEEAHEFLGRVQNGGVLPMMT 299
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ Y E + + L ++S KSPQQ+ G++ KT+ AEK+G+ P I V++MPC
Sbjct: 300 SCSPGWIKYCEHYYPD-QLEHLSSCKSPQQMFGAIAKTYYAEKMGIDPKDIVCVSVMPCT 358
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E +R D + G DVD IT EL L+ + D D P E
Sbjct: 359 AKKFEINRDD--QDAAGVPDVDISITTRELARLIRK--VGINFRSLPDEGFDDPLGESTG 414
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ +GG L A+ L E +EF +R + I+EAT+ + ++
Sbjct: 415 AGVIF---GATGGVMEAALRTAVETLTGEELASLEFNEVRGTEGIKEATYNVAGMDVKVA 471
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKETA 418
+A+G N + ++ K++ Y FIEIM CP GC+NGG Q +RN E V + + A
Sbjct: 472 VASGLSNAKQIMDKVRAGEADYHFIEIMCCPGGCVNGGGQPQVHADVRNYEDVRAIRAKA 531
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L L KS +N +++ LY +LG ++K H+L+TSY
Sbjct: 532 LYDNDKAKTLRKS--HDNPSIKKLYDEFLGEPGSEKAHHILHTSY 574
>gi|357056152|ref|ZP_09117207.1| hypothetical protein HMPREF9467_04179 [Clostridium clostridioforme
2_1_49FAA]
gi|355381400|gb|EHG28526.1| hypothetical protein HMPREF9467_04179 [Clostridium clostridioforme
2_1_49FAA]
Length = 581
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 197/412 (47%), Gaps = 45/412 (10%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + +T++ + +V I + H +++ A L
Sbjct: 189 TSCVSCGQCIAVCPTGALTEKDYTADVFAAIADPKKH----------VIVQTAPAVRAGL 238
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F L V K+ +RLG D V D + +++E +EF+DR +GG PL T
Sbjct: 239 GEEFGLPIGTDVEGKMAAALRRLGFDKVFDTNFSADLTIMEEAHEFIDRVQNGGVLPLIT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV Y E + + +S KSPQQ+ G++ K++ AEK G+ P I V++MPC
Sbjct: 299 SCSPGWVKYCEHYFPD-MTENLSSCKSPQQMFGAIAKSYYAEKAGIDPKDIVSVSVMPCT 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI--LDWPWDEH 304
KK E R D + G DVD IT EL ++ +K GI LD P +E
Sbjct: 358 AKKFEIGRED--EDANGMPDVDISITTRELARMI-----------KKAGIRFLDLPDEEF 404
Query: 305 NPHRMLLVNGTG-------SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFT 356
+ L GTG +GG L A+ L E P +F +R I+EAT+
Sbjct: 405 DAPLGL---GTGAAVIFGATGGVMEAALRTAVETLTGEELPKPDFTEVRGTKGIKEATYN 461
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE-KVASPK 415
+ ++ +A+G N + L+ K+K Y FIEIM CP GC+NGG Q + V +
Sbjct: 462 VAGMEVKIAVASGLGNARELLNKVKSGEANYHFIEIMGCPGGCVNGGGQPQQPGHVRNTT 521
Query: 416 ETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ +L D+ + P EN ++ LY +LG ++K H+L+T+Y
Sbjct: 522 DIRGLRAKVLYDIDTANPIRKSHENPAIKELYATYLGEPGSEKAHHLLHTTY 573
>gi|320591162|gb|EFX03601.1| iron-sulfur cluster assembly associated protein [Grosmannia
clavigera kw1407]
Length = 605
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 158/504 (31%), Positives = 225/504 (44%), Gaps = 112/504 (22%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKP+ PS P A + + I++
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVET-LPSAPAASAS---ELEHEVIRDGLPGAGGAPPA 56
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNA--------------------- 104
ISLTDCLACSGC+TSAE+VL++ QSH+E+++ + A
Sbjct: 57 SISLTDCLACSGCVTSAEAVLVSLQSHKELLRALDAGPALELLPSSTSYVVQGLDDPDHP 116
Query: 105 ----HKASSNENTKTIVLSLAIQPVLSLGAKFALSH-----EQVVAKLCGFFKRLGVDLV 155
+ AS + T+ + + V + A L H + A G G V
Sbjct: 117 DRLLYVASVSPQTRANLATACGPGVSAQQAGHMLDHLLSGPTGLRASSHGNGNGNGFAWV 176
Query: 156 LDVGIAHCFSLVELENEFLD--------RFLSGGGPLFTSECPGWVCYAEKSHGEFILPY 207
+D A +LV +E S L TS CPGW+CYAEK+H +L +
Sbjct: 177 VDTNAAREATLVLGADEVAQFHPSPPTSTSSSPPKALLTSSCPGWICYAEKTH-PHVLGH 235
Query: 208 ISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL----- 262
+SRVKSPQ + G+L+KT L+ LG+ P I+HV +MPC+DKKLEASR + +
Sbjct: 236 LSRVKSPQALTGTLLKTTLSRTLGIPPGRIWHVAIMPCFDKKLEASREELTDAAWDGSKD 295
Query: 263 -----GYRDVDCVITAVELEVL----------LANELATTTLQEE----------KDGIL 297
G RDVDCVIT+ E+ +L L + LQ++ D +L
Sbjct: 296 GHGHHGVRDVDCVITSKEVLMLAESRGIDFFSLPKTPLSPLLQDKCQPSSSRLPFPDAVL 355
Query: 298 D---WPWDEHNPHRMLLVNGTG-SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
D +P + R + G SGG H VL + Q PG S ++ RN D+ E
Sbjct: 356 DRFLFPPRQ----RSAPTSAAGSSGGNLHFVLQSVLAQ-NPGSS--LQTNRGRNVDVVEY 408
Query: 354 TFTCGDVT---LRFCIANGFRNIQNLIQKLKRKR-------------------------L 385
T + + GFRNIQNL+++L+ R L
Sbjct: 409 AITAPGLDEPLFKAARYYGFRNIQNLVRRLRPARPSRLPGGRPVGSAARRVPTGKAGAGL 468
Query: 386 PYDFIEIMACPSGCLNGGAQIRNE 409
+ ++E+MACP GC NGG QI+ +
Sbjct: 469 DFAYVEVMACPGGCTNGGGQIKAD 492
>gi|289578043|ref|YP_003476670.1| hydrogenase, Fe-only [Thermoanaerobacter italicus Ab9]
gi|289527756|gb|ADD02108.1| hydrogenase, Fe-only [Thermoanaerobacter italicus Ab9]
Length = 581
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 210/413 (50%), Gaps = 43/413 (10%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI I ++ H + ++A ++E K +V A
Sbjct: 185 SLKDSPCISCGQCIEVCPVGAIYEKDHTK--------RVYEALADEK-KYVVAQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + +V K+ KR+G D V D A +++E +E L+R +GG P
Sbjct: 236 VALGEEFGMPIGSIVTGKMVAALKRMGFDAVFDTDFAADLTIMEEGSELLERLKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ + EK + EFI +S KSP +MG+L+K++ AEK G++P IY V++M
Sbjct: 296 MITSCSPGWIAFCEKYYPEFI-DNLSTCKSPHMMMGALVKSYYAEKEGLNPEDIYVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KKLE R + + G +DVD V+T EL ++ +E ++ P +E
Sbjct: 355 PCTAKKLEIERPEMQHN--GIKDVDAVLTTRELARMI---------KEMGIDFVNLPDEE 403
Query: 304 HN-PHRMLLVNGTGSG---GYAHNVLSHAIRQLCP----GESPVVEFKPLRNPD-IREAT 354
++ P M TG+G G V+ A+R + E V+F+ +R + +REAT
Sbjct: 404 YDEPLGM----STGAGVIFGATGGVMEAALRTVADIVEGRELDKVDFEEVRGLEGVREAT 459
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
+ ++ IANG N + L+ K+K + Y FIE+M CP GC+ GG Q +
Sbjct: 460 IKIDGMDIKVAIANGTGNAKKLLDKIKAGEVEYHFIEVMGCPGGCIMGGGQPIHNPNEMG 519
Query: 415 KETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
K L + I + KS P +N ++ LY+ +LG ++K H+L+T Y
Sbjct: 520 KVKELRAKAIY-EADKSLPIRKSHKNPAIQKLYEEFLGSPLSEKSHHLLHTHY 571
>gi|297544314|ref|YP_003676616.1| hydrogenase, Fe-only [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296842089|gb|ADH60605.1| hydrogenase, Fe-only [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 581
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 210/413 (50%), Gaps = 43/413 (10%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI I ++ H + ++A ++E K +V A
Sbjct: 185 SLKDSPCISCGQCIEVCPVGAIYEKDHTK--------RVYEALADEK-KYVVAQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + +V K+ KR+G D V D A +++E +E L+R +GG P
Sbjct: 236 VALGEEFGMPIGSIVTGKMVAALKRMGFDAVFDTDFAADLTIMEEGSELLERLKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ + EK + EFI +S KSP +MG+L+K++ AEK G++P IY V++M
Sbjct: 296 MITSCSPGWIAFCEKYYPEFI-DNLSTCKSPHMMMGALVKSYYAEKEGLNPEDIYVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KKLE R + + G +DVD V+T EL ++ +E ++ P +E
Sbjct: 355 PCTAKKLEIERPEMQHN--GIKDVDAVLTTRELARMI---------KEMGIDFVNLPDEE 403
Query: 304 HN-PHRMLLVNGTGSG---GYAHNVLSHAIRQLCP----GESPVVEFKPLRNPD-IREAT 354
++ P M TG+G G V+ A+R + E V+F+ +R + +REAT
Sbjct: 404 YDEPLGM----STGAGVIFGATGGVMEAALRTVADIVEGRELDKVDFEEVRGLEGVREAT 459
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
+ ++ IANG N + L+ K+K + Y FIE+M CP GC+ GG Q +
Sbjct: 460 IKIDGMDIKVAIANGTGNAKKLLDKIKAGEVEYHFIEVMGCPGGCIMGGGQPIHNPNEMG 519
Query: 415 KETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
K L + I + KS P +N ++ LY+ +LG ++K H+L+T Y
Sbjct: 520 KVKELRAKAIY-EADKSLPIRKSHKNPAIQKLYEEFLGSPLSEKSHHLLHTHY 571
>gi|239627946|ref|ZP_04670977.1| hydrogenase [Clostridiales bacterium 1_7_47_FAA]
gi|239518092|gb|EEQ57958.1| hydrogenase [Clostridiales bacterium 1_7_47FAA]
Length = 596
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 199/410 (48%), Gaps = 41/410 (10%)
Query: 70 TDCLACSGCITSAESVLITQQSHE-EVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + +T++ + +V I + + H +++ A L
Sbjct: 189 TSCVSCGQCIAVCPTGALTEKDYTGDVFAAIADPSKH----------VIVQTAPAVRAGL 238
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F L V K+ +RLG D V D + +++E +EFLDR +GG P+ T
Sbjct: 239 GEEFGLPIGTDVEGKMAAALRRLGFDKVFDTNFSADLTIMEEAHEFLDRVQNGGVLPMIT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV Y E + + +S KSPQQ+ G++ K++ AEK G+ P I V++MPC
Sbjct: 299 SCSPGWVKYCEHYFPD-MTENLSTCKSPQQMFGAIAKSYYAEKAGIDPKDIVSVSVMPCT 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI--LDWPWDEH 304
KK E R D + G DVD IT EL ++ +K GI LD P DE
Sbjct: 358 AKKFEIGRED--QDANGVPDVDISITTRELARMI-----------KKAGIRFLDLP-DEK 403
Query: 305 NPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCG 358
+ L G +GG L A+ L E P ++F+ +R I+EAT+
Sbjct: 404 FDDPLGLGTGAAVIFGATGGVMEAALRTAVESLTGEELPKLDFEEVRGTKGIKEATYNVA 463
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE-KVASPKET 417
+ ++ +A+G N + L++K+K Y FIEIM CP GC+NGG Q + V + +
Sbjct: 464 GMDVKVAVASGLGNAKELLEKVKSGEADYHFIEIMGCPGGCVNGGGQPQQPGHVRNTTDI 523
Query: 418 ALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L ++ + P EN ++ LY A+LG ++ H+L+T+Y
Sbjct: 524 RGLRAKVLYNIDSANPIRKSHENPAIKELYAAYLGEPGSEVAHHLLHTTY 573
>gi|373487460|ref|ZP_09578128.1| hydrogenase, Fe-only [Holophaga foetida DSM 6591]
gi|372009542|gb|EHP10162.1| hydrogenase, Fe-only [Holophaga foetida DSM 6591]
Length = 1061
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 207/410 (50%), Gaps = 45/410 (10%)
Query: 70 TDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIV-LSLAIQPVLS 127
TDC++C C+ + LI + E V + I +N+N T+ ++ A++ V+S
Sbjct: 670 TDCVSCGQCVNACPCGALIAKSEKESVFRAI---------NNQNLTTVAFVAPAVRSVIS 720
Query: 128 LGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
A+F + +Q + G K+LG V D A +++E EFLDR SGG P FT
Sbjct: 721 --AEFGIPFDQASNFMSGLLKKLGFGKVFDFSFAADLTIMEETTEFLDRVSSGGVLPQFT 778
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + E+ + + I P++S KSPQ +MG+ +K H A +++ V+++PC
Sbjct: 779 SCCPGWVNFVERRYPDLI-PHLSSCKSPQMMMGATVKNHFASTSRADRRNLFVVSIVPCI 837
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA+R +F + G RDVD V+T+ E LE+L + +T+ D P+ +
Sbjct: 838 AKKHEAARPEFAPD--GIRDVDAVLTSTEILEMLYLKRIDPSTIPMVP---FDPPYQQ-- 890
Query: 306 PHRMLLVNGTG-----SGGYAHNVLSHAIRQLC-PGESPVVEFKPLRNPD-IREATFTCG 358
V+G G SGG A L A+ +L ++F+ +R + ++EAT
Sbjct: 891 ------VSGAGVLFGASGGVAEAALRLAVEKLTGQARCTQLDFEEIRGFEGLKEATIETQ 944
Query: 359 DVTLRFCIANGFRNIQNLIQKLKR-KRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
D +R + +G N L +++ + + YD IE+MACP GC+ G EKV T
Sbjct: 945 DSRVRVAVVSGLHNAARLAEEIAQGQETGYDLIEVMACPGGCICGAGHPVPEKVG----T 1000
Query: 418 ALELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ + +L D+ K+ + +EN + LY + G ++ +L+T Y
Sbjct: 1001 LNDRQQVLVDIDKTSSHRKSQENPDIHRLYDEFFGEPNSPLAHKLLHTHY 1050
>gi|156121281|ref|NP_001095788.1| nuclear prelamin A recognition factor [Bos taurus]
gi|151553625|gb|AAI48984.1| NARF protein [Bos taurus]
gi|296476152|tpg|DAA18267.1| TPA: nuclear prelamin A recognition factor [Bos taurus]
Length = 275
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 128/225 (56%), Gaps = 8/225 (3%)
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
G KL +I L+DCLAC C+++ E + ++QQ+ ++ +V+ N +K K
Sbjct: 37 KGEFHKLADAKIFLSDCLACDSCVSAEEGIQVSQQNAKDFFQVL---NLNKKCDTSEHKV 93
Query: 116 IVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
+ +SL Q + AKF+LS +LCGF K LGV V D IA FS++E + EF+
Sbjct: 94 LAVSLCPQSLPYFAAKFSLSVTDASRRLCGFLKSLGVHYVFDTTIAADFSILESQKEFVR 153
Query: 176 RFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
RF P+ TS CPGWV YAE+ G + P++ KSPQQ+MGSL+K + A +
Sbjct: 154 RFRQHNEEEPALPMLTSACPGWVRYAERVLGHPVTPHLCTAKSPQQIMGSLVKDYFARRQ 213
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE 275
+ P I+HV + PCYDKKLEA + D G R DCV+T+ E
Sbjct: 214 NLSPDKIFHVIVAPCYDKKLEALQEDVLTASRGSRGTDCVLTSGE 258
>gi|298711308|emb|CBJ26553.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 686
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 178/381 (46%), Gaps = 99/381 (25%)
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK-------------------- 223
+ TS CPGWVCYAEK+ E LP++S VKSPQQ+MG L K
Sbjct: 298 VLTSACPGWVCYAEKTAPE-ALPFMSTVKSPQQMMGVLAKRVFPRAWNHPHPSVAAAAAV 356
Query: 224 ------------------THLAEKLG-----------VHPSHIYHVTLMPCYDKKLEASR 254
T A L V ++HV++ CYDKKLEASR
Sbjct: 357 TAAADEVSRVRDSASNGATPAASTLANETLDQSTPPPVRSRGVFHVSIAQCYDKKLEASR 416
Query: 255 ADFYNEEL-GYRDVDCVITAVELEVLL--------ANELATTTLQEEKDGILDWPWDEHN 305
DF + +L G +VD V+T E+ L+ A +T+ +D D+ + H
Sbjct: 417 KDFRHPDLDGDAEVDLVLTTAEVLELIEESASAADATLTSTSPASPGRDAASDY-FRRHF 475
Query: 306 PHRMLL------------------------VNGTG-----SGGYAHNVLSHAIRQLCP-- 334
P L V+G G S GY V HA +L
Sbjct: 476 PPGDLAEPLAPGFPVGQAAVSVDGLSLFGGVDGEGAAGGNSDGYLEYVFRHAAVELFGVD 535
Query: 335 -GESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEI 392
P+V ++ RN D RE + G V LRF A GFRNIQ+++ K +R + PY F+E+
Sbjct: 536 LAGRPLV-YREGRNADFRETSLEVNGQVALRFAYAYGFRNIQSILAKARRGKCPYHFVEV 594
Query: 393 MACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSE----PRENATLEHLYKAWLG 448
MACPSGC+NGG QI+ +K P++T L +E + L + PR+N ++ +Y +G
Sbjct: 595 MACPSGCVNGGGQIKPKKKEGPRDTRLRVERVSEVLREGRVPRGPRDNPVVQAVYSELVG 654
Query: 449 GKSTD-KGKHMLNTSYHNIPK 468
G + + + +L+TSYHN+PK
Sbjct: 655 GGPGESRARELLHTSYHNVPK 675
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 33/192 (17%)
Query: 12 LTDLDDFIGPSQECIKPI------------PIEKPSGPRTGAK--IRIQDD-----GAYI 52
L DLDDFI P Q CI P+ + +G + GA + I+DD +
Sbjct: 6 LGDLDDFIAPGQACINPLFTTAADSAPATAAAAESAGSKGGAAMVLEIEDDRGPLDAMAV 65
Query: 53 QETNG----REEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKAS 108
+E R + ++SL DCLACSGC+TSAE+VLITQQS ++ + +
Sbjct: 66 EEVVKPDLIRASNTQTAKVSLDDCLACSGCVTSAETVLITQQSTGKLREAV--------- 116
Query: 109 SNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLV 167
++ +V S+ Q SL +F LS + A+L F + R GV ++D + FSL+
Sbjct: 117 ASGRYSVVVASITPQARASLAERFGLSPAETHARLLAFLRERHGVHHLVDSSLGADFSLL 176
Query: 168 ELENEFLDRFLS 179
E EF+ R+ S
Sbjct: 177 EAGEEFVQRWRS 188
>gi|210616162|ref|ZP_03290965.1| hypothetical protein CLONEX_03184 [Clostridium nexile DSM 1787]
gi|210149924|gb|EEA80933.1| hypothetical protein CLONEX_03184 [Clostridium nexile DSM 1787]
Length = 594
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 200/414 (48%), Gaps = 33/414 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + + ++ + +EV++ I + H +V+ A +L
Sbjct: 202 TSCVSCGQCIAVCPTGALQEKDYIDEVLEAIADPEKH----------VVVQTAPSVRAAL 251
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F V ++ +R+G D V D + +++E EF+DR +GG PL T
Sbjct: 252 GEEFGYPIGTDVEGRMVAALRRIGFDKVFDTDFSADLTIMEEAREFIDRVQNGGVLPLIT 311
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ Y E + + +S KSPQQ+ G++ KT+ AEK G+ P I V++MPC
Sbjct: 312 SCSPGWIKYCEHYFPD-MTENLSSCKSPQQMFGAITKTYYAEKTGMDPKDIVCVSVMPCT 370
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWDEHN 305
KK E R D G DVD IT EL L+ L T L EE D P E
Sbjct: 371 AKKFEIGRED--QNAAGVPDVDIAITTRELARLIKRTGLDFTGLPEEN---FDDPLGEST 425
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRF 364
++ GT +GG L A+ L E V+F+ +R D I+EAT+ + ++
Sbjct: 426 GAAVIF--GT-TGGVMEAALRTAVETLTGEELAKVDFEDVRGTDGIKEATYNVAGMDVKV 482
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKET 417
+A+G +N + L+ K+ Y FIEIM CP GC+NGG Q +RN V + +
Sbjct: 483 AVASGLQNAKELLDKVNAGEADYHFIEIMGCPGGCVNGGGQPQVSADVRNFTDVRAARAK 542
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
L + KS EN +++ LY+ +LG + K +L+TSY N+I
Sbjct: 543 VLYDNDAKKAIRKS--HENPSIQKLYEEFLGRPGSQKAHEILHTSYIKRTINSI 594
>gi|345017340|ref|YP_004819693.1| hydrogenase, Fe-only [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032683|gb|AEM78409.1| hydrogenase, Fe-only [Thermoanaerobacter wiegelii Rt8.B1]
Length = 581
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 210/417 (50%), Gaps = 51/417 (12%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI I ++ H ++A ++E K +V A
Sbjct: 185 SLKDSPCISCGQCIQVCPVGAIYEKDHT--------RRVYEALADEK-KYVVAQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + +V K+ +R+G D V D A +++E +E L+R +GG P
Sbjct: 236 VALGEEFGMPIGSIVTGKMVAALRRMGFDAVFDTDFAADLTIMEEGSELLERLKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ + EK + EFI +S KSP +MG+L+K++ AEK G++P IY V++M
Sbjct: 296 MITSCSPGWIAFCEKYYPEFI-DNLSTCKSPHMMMGALVKSYYAEKKGLNPEDIYVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KKLE R + ++ G +DVD V+T EL ++ E+ + + D +DE
Sbjct: 355 PCTAKKLEIERPEMQHK--GIKDVDAVLTTRELARMI-KEMGIDFVN-----LKDEEYDE 406
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IR 351
P M TG+G G V+ A+R + + +VE K L D +R
Sbjct: 407 --PLGM----STGAGVIFGATGGVMEAALRTV----ADIVEGKDLDKFDYEEVRGLEGVR 456
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRN-- 408
EAT + ++ IANG N + L+ K+K + Y FIE+M CP GC+ GG Q I N
Sbjct: 457 EATIRIDGMDIKVAIANGTGNAKKLLDKVKAGEVEYHFIEVMGCPGGCIMGGGQPIHNPN 516
Query: 409 --EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
EKV + A+ + KS +N ++ LY+ +LG ++K H+L+T Y
Sbjct: 517 EMEKVKELRAKAIYEADKNLPIRKS--HKNPAIQKLYEEFLGSPLSEKSHHLLHTHY 571
>gi|428176855|gb|EKX45737.1| hypothetical protein GUITHDRAFT_42060, partial [Guillardia theta
CCMP2712]
Length = 389
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 201/417 (48%), Gaps = 52/417 (12%)
Query: 14 DLDDFIGPSQECIKPI----PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISL 69
DL+DF+ P+ EC+ P+ +K G R ++ R E + V SL
Sbjct: 2 DLNDFLSPASECVLPLKAIDTFKKSEGSR--------------KDPKNRSEVVASV--SL 45
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
+DCL+CSGC+TSAE V++ +Q + + K + E T V+S + Q + SL
Sbjct: 46 SDCLSCSGCVTSAEEVMMKRQGVDHLTKAV-----------EVGSTCVVSFSPQSLSSLA 94
Query: 130 AKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
A F + + + F K R+GV V D ++ + E + EF++R+ + G P+ +
Sbjct: 95 ACFNTTASKFARSVSSFLKLRVGVKFVFDTSLSAQVAQHEAKKEFMERWGARGPFPILCT 154
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL-------GVHPSHIYHV 240
ECPG V ++EK + +S V+SPQ + G +T+L L G I+H
Sbjct: 155 ECPGVVIFSEKKQYDLFARLLSTVRSPQAISGE--RTYLFSSLNPFDMSTGKLIKQIWHC 212
Query: 241 TLMPCYDKKLEASRADFYNEEL------GYRDVDCVITAVELEVLLANELATTTLQEEKD 294
T+MPC+DKKLE++R +F E + D VIT E L E +E +
Sbjct: 213 TIMPCFDKKLESAREEFSVVETEGGALTSSPETDAVITTSEFYSYLLQEGFQFQGGKESN 272
Query: 295 GILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP---VVEFKPLRNPDIR 351
+ + ++ + S GY V HA +Q+ P V + + DI+
Sbjct: 273 VGRKFKLPSMSEPQLSDHSAGFSNGYLEVVARHAAQQILGINLPPSLVYNYPATGSLDIK 332
Query: 352 EATFTCGD-VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
E T + G L F G+R++Q LIQK++ ++ Y ++E+M+CP GC NGG Q++
Sbjct: 333 ELTVSDGSGRELNFAAVYGYRHLQTLIQKVRMRQCKYHYVELMSCPEGCTNGGGQLK 389
>gi|160936127|ref|ZP_02083500.1| hypothetical protein CLOBOL_01023 [Clostridium bolteae ATCC
BAA-613]
gi|158440937|gb|EDP18661.1| hypothetical protein CLOBOL_01023 [Clostridium bolteae ATCC
BAA-613]
Length = 581
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 196/412 (47%), Gaps = 45/412 (10%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + +T++ + +V I + H +++ A L
Sbjct: 189 TSCVSCGQCIAVCPTGALTEKDYTADVFAAIADPKKH----------VIVQTAPAVRAGL 238
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F L V K+ +RLG D V D + +++E +EF+DR +GG PL T
Sbjct: 239 GEEFGLPIGTDVEGKMAAALRRLGFDKVFDTNFSADLTIMEEAHEFIDRVQNGGVLPLIT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV Y E + + +S KSPQQ+ G++ K++ AEK G+ P I V++MPC
Sbjct: 299 SCSPGWVKYCEHYFPD-MTENLSSCKSPQQMFGAIAKSYYAEKAGIDPKDIVSVSVMPCT 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI--LDWPWDEH 304
KK E R D + G DVD IT EL ++ +K GI LD P +E
Sbjct: 358 AKKFEIGRED--EDANGMPDVDISITTRELARMI-----------KKAGIKFLDLPDEEF 404
Query: 305 NPHRMLLVNGTG-------SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFT 356
+ L GTG +GG L A+ L E P +F +R I+EA +
Sbjct: 405 DAPLGL---GTGAAVIFGATGGVMEAALRTAVETLTGEELPKPDFTEVRGTKGIKEAAYN 461
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE-KVASPK 415
+ ++ +A+G N + L+ K+K Y FIEIM CP GC+NGG Q + V +
Sbjct: 462 VAGMEVKIAVASGLGNARELLNKVKSGEANYHFIEIMGCPGGCVNGGGQPQQPGHVRNTT 521
Query: 416 ETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ +L D+ + P EN ++ LY +LG ++K H+L+T+Y
Sbjct: 522 DIRGLRAKVLYDIDTANPIRKSHENPAIKELYATYLGEPGSEKAHHLLHTTY 573
>gi|169335143|ref|ZP_02862336.1| hypothetical protein ANASTE_01550 [Anaerofustis stercorihominis DSM
17244]
gi|169257881|gb|EDS71847.1| hydrogenase, Fe-only [Anaerofustis stercorihominis DSM 17244]
Length = 581
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 216/438 (49%), Gaps = 40/438 (9%)
Query: 44 RIQDDGAYIQETNGREEKLKKVE---ISLTDCLACSGCITSAESVLITQQSH-EEVMKVI 99
+IQ GA I + NG + K + V+ ++ T+C+ C CI + +T++ + +EV + +
Sbjct: 157 KIQGIGALIGKDNGFDSKSRPVKGDVLADTNCINCGQCIINCPVGALTEKVNVDEVWEAL 216
Query: 100 RENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDV 158
+ N H +V+ A +LG +F V K+ +RLG D V D
Sbjct: 217 SDENKH----------VVVQPAPAVRAALGEEFGYEIGTDVTGKMVASMRRLGFDKVFDT 266
Query: 159 GIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQV 217
+++E E +DR +GG P+ TS CP WV E+ + E +L +S KSPQ +
Sbjct: 267 DFGADMTIMEEAYELVDRVTNGGTLPMVTSCCPAWVKMCEQEYPE-LLDNLSSCKSPQAM 325
Query: 218 MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELE 277
G+LIKTH AE + P IY V++MPC KK E +R ++L D D IT EL
Sbjct: 326 TGALIKTHYAEVNNIDPKDIYVVSVMPCVAKKFEVAREQLKEDDL--FDSDVCITTRELA 383
Query: 278 VLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGES 337
++ A + D D + E + ++ +GG A+ +
Sbjct: 384 RMIKE--AGIDFKNLDDEDFDPIYGESSGAGVIF---GATGGVMEAAARTAVEAITGEVC 438
Query: 338 PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
V+++ +R D ++EAT T GD ++ + +G NI+ L+ K+K+ YDFIE MAC
Sbjct: 439 ENVDYEAVRGLDGLKEATITAGDKEIKVAVVHGGANIKKLMDKVKKGEADYDFIECMACI 498
Query: 397 SGCLNGG------AQIRNEKVASPKETALELETILCDLAKS-----EPRENATLEHLYKA 445
GC+NGG +Q+ N ++ P+E A +L + K+ + EN +++ +YK
Sbjct: 499 GGCVNGGGQPIVNSQLINAGLSLPQERA----KVLYNQDKNVRPVRKSHENPSVQKVYKE 554
Query: 446 WLGGKSTDKGKHMLNTSY 463
+L ++ K +L+T+Y
Sbjct: 555 FLEKPNSHKAHEILHTTY 572
>gi|261333200|emb|CBH16195.1| iron-containing hydrogenase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 475
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 210/446 (47%), Gaps = 52/446 (11%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M+++ FS L L +D +I PS+ CI P ++ + D + + G E
Sbjct: 1 MSANNFSASLMLAGMD-YIAPSEACILPTKLQGGT-----------SDDSVKRHGAGNE- 47
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
V+I+L DCLACSGC+T+AE++LIT QS EE++ K + + T+ +++
Sbjct: 48 ---AVKITLQDCLACSGCVTTAETILITSQSREELL---------KDRALDPTRPFFVTI 95
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q S+ A ++ + GFF+ L V D+ A S+ + E+ R
Sbjct: 96 SDQSAASIAAFLKTDVQKAFHIVSGFFRAVLNARYVSDLHWALRISVEKTAEEYCRRVRC 155
Query: 180 GGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
PL S CPGWVCY EK G ILP + V SPQ + G KT + + +
Sbjct: 156 ERERLPLIVSACPGWVCYCEK-QGAAILPLLCPVMSPQGIAGCYSKTLIPQ--------M 206
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQE--EKDG 295
HV++ PC+D+KLEA+R + G R D V++ EL + + Q + D
Sbjct: 207 CHVSVQPCFDRKLEAARDG--SSVSGERYTDFVLSTQELLDWMLEVDPSLPWQAPLDSDL 264
Query: 296 ILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE-SPV---VEFKPLRNPDIR 351
P R GSGGY + A R+L E +P E K N +
Sbjct: 265 EPLPILPPEEPKRSFAATMEGSGGYHRYAMHRAARELHGLELAPRDIHYEMKRNANHHLT 324
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKR---LPYDFIEIMACPSGCLNGGAQIRN 408
+ G+V FC+A GF+ IQN ++ +KRK Y FIE+MACP GCLNGG Q RN
Sbjct: 325 TSPSNPGEV---FCVAYGFQQIQNTVRGIKRKLASVASYTFIELMACPEGCLNGGGQARN 381
Query: 409 EKVASPKE-TALELETILCDLAKSEP 433
S E TA + ++ S+P
Sbjct: 382 GTTQSHVETTAAAKSAFISYISGSQP 407
>gi|167752244|ref|ZP_02424371.1| hypothetical protein ALIPUT_00486 [Alistipes putredinis DSM 17216]
gi|167660485|gb|EDS04615.1| hydrogenase, Fe-only [Alistipes putredinis DSM 17216]
Length = 589
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 199/411 (48%), Gaps = 32/411 (7%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I T+C+ C C+ + +++ S+ EVM+ + + KT+V+ A
Sbjct: 190 ILTTNCVNCGQCVAVCPTSALSENSNIREVMQALADPG----------KTVVVQTAPAVR 239
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR---FLSGGG 182
++LG F L V K+ +RLG D V D A +++E E L R +L+G
Sbjct: 240 VALGQDFGLEGRSVTGKMTTALRRLGFDYVFDTDFAADLTIMEEGTELLQRLNKYLAGDR 299
Query: 183 ----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
PL TS CPGWV + EK E + +S KSPQQ+ G++ K +LA KLG+ +
Sbjct: 300 TVKIPLMTSCCPGWVSFMEKHFPE-LGENLSTAKSPQQMFGAIAKNYLAPKLGIDRRNFI 358
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD 298
V++MPC KK EA+R +F + G DV+ IT EL ++ A E ++ D
Sbjct: 359 VVSVMPCVAKKSEAARPEFGKD--GDPDVNISITTRELAHMI--RFANMNFDELEESDFD 414
Query: 299 WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTC 357
P E ++ GT +GG + A P ++F LR IR AT
Sbjct: 415 RPLGESTGAGVIF--GT-TGGVIEAAVRTAYEIQTKKTLPKLDFTELRGLAGIRSATIDF 471
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASP 414
V ++ IA+G N + L+++++ R PY IEIMACP GC+NGG Q NE++
Sbjct: 472 DGVPVKIGIAHGLGNARRLVEEIRAGRSPYHAIEIMACPGGCINGGGQPYHRGNEELLKR 531
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ AL E L KS EN ++ LY+ +LG +L+T Y++
Sbjct: 532 RAEALYAEDAAKPLRKSH--ENPDIQALYEEFLGEPCGPLSHELLHTRYYD 580
>gi|156082966|ref|XP_001608967.1| nuclear prelamin A recognition factor-like [Babesia bovis T2Bo]
gi|154796217|gb|EDO05399.1| nuclear prelamin A recognition factor-like, putative [Babesia
bovis]
Length = 583
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 217/509 (42%), Gaps = 123/509 (24%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
FS +++ L+D++ S+EC+ P+ G + KI+ + + +++ K++
Sbjct: 2 FSTAVKIDQLNDYLSLSEECVLPV---GKQGEKYEVKIKSKITDVSKKNAIDDKQESKRI 58
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+ L+DC++CSGC+TS+E +++ + +E++ K I + V+S+A Q
Sbjct: 59 LVGLSDCMSCSGCLTSSEDIILRDRGYEDIAKKIG-----------TAEFAVVSIAPQTA 107
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF------------ 173
A + +SH+ +L + LG V D+ I+ + E + EF
Sbjct: 108 FMFAAAYKVSHQTAYRRLSYLLRTLGAKKVYDMQISEQICIEETKREFKRGLEKLLNRTD 167
Query: 174 -----------LDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLI 222
+D L P+ + CPGW YAEKS I IS+V S QQ+ G+LI
Sbjct: 168 IPESSTNTPNCVDHELLPNLPIIAAHCPGWTTYAEKSLDASITSNISKVASSQQIQGALI 227
Query: 223 KTHLAEKLG---------------------------------VHPSHIYHVTLMPCYDKK 249
KT L ++ S IYHVT PCYDKK
Sbjct: 228 KTVLWLQIAFGKVRGYLGTSWSGAFYRTIDDILRLWGDGTVNAKVSTIYHVTTAPCYDKK 287
Query: 250 LEASRAD-------FYNEELGYRD------VDCVITAVELE------------------- 277
+EA +A YN + ++ VD VI+ +L+
Sbjct: 288 VEALKAQNGVDLSGLYNRFMPTQEKHQVQLVDDVISTGDLQRIMELYNLDFATLPEADLD 347
Query: 278 ------------VLLANELATTTLQEEKDGILDWPWDE------HNPHRMLLVNG--TGS 317
L ANE TL+ + + + + + P R L + S
Sbjct: 348 DMFTGKECFVFNKLFANETIRNTLEHQNAMSSNGSFQQLPIPLTYKPKRHLRPSSQHAQS 407
Query: 318 GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRFCIANGFRNIQNLI 377
GG A V + + L +S ++F+ N D +EAT ++ ++F +A GFRNIQN++
Sbjct: 408 GGLAQEVKAFTAKYLGIDDS-AMQFQESINRDYKEATLLINNLAIKFVMAYGFRNIQNIV 466
Query: 378 QKLKRKRLPYDFIEIMACPSGCLNGGAQI 406
KLK+ +IE+MACP GC NG Q+
Sbjct: 467 NKLKKMDHTMAYIEVMACPEGCFNGAGQV 495
>gi|392940524|ref|ZP_10306168.1| hydrogenase, Fe-only [Thermoanaerobacter siderophilus SR4]
gi|392292274|gb|EIW00718.1| hydrogenase, Fe-only [Thermoanaerobacter siderophilus SR4]
Length = 581
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 209/417 (50%), Gaps = 51/417 (12%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI I ++ H ++A ++E K +V A
Sbjct: 185 SLKDSPCISCGQCIQVCPVGAIYEKDHT--------RRVYEALADEK-KYVVAQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + +V K+ +R+G D V D A +++E +E L+R +GG P
Sbjct: 236 VALGEEFGMPIGSIVTGKMVAALRRMGFDAVFDTDFAADLTIMEEGSELLERLKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ + EK + EFI +S KSP +MG+L+K++ AEK G++P IY V++M
Sbjct: 296 MITSCSPGWIAFCEKYYPEFI-DNLSTCKSPHMMMGALVKSYYAEKKGLNPEDIYVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KKLE R + + G +DVD V+T EL ++ E+ + + D +DE
Sbjct: 355 PCTAKKLEIERPEMQHN--GIKDVDAVLTTRELARMI-KEMGIDFVN-----LKDEEYDE 406
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IR 351
P M TG+G G V+ A+R + + +VE K L D +R
Sbjct: 407 --PLGM----STGAGVIFGATGGVMEAALRTV----ADIVEGKDLDKFDYEEVRGLEGVR 456
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRN-- 408
EAT + ++ IANG N + L+ K+K + Y FIE+M CP GC+ GG Q I N
Sbjct: 457 EATIRIDGMDIKVAIANGTGNAKKLLDKVKAGEVEYHFIEVMGCPGGCIMGGGQPIHNPN 516
Query: 409 --EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
EKV + A+ + KS +N ++ LY+ +LG ++K H+L+T Y
Sbjct: 517 EMEKVKELRAKAIYEADKNLPIRKS--HKNPAIQKLYEEFLGSPLSEKSHHLLHTHY 571
>gi|374105944|gb|AEY94854.1| FABL205Cp [Ashbya gossypii FDAG1]
Length = 451
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 146/433 (33%), Positives = 202/433 (46%), Gaps = 84/433 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S L +DL+DFIGP C+KP RT + D+G E ++ KV
Sbjct: 1 MSAKLSESDLNDFIGPQVACVKPT--------RT---LHTADEGDEALEVGKEPQEATKV 49
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
ISL DCLAC+GCITS+E +L+++QSH ++ R + K + +S+A Q
Sbjct: 50 SISLQDCLACAGCITSSEEILLSRQSHGVFLEAWR---------SLAPKALAVSVAPQSR 100
Query: 126 LSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG-GGP 183
LSL F LS ++ L G G V+ + S+ + ++R G GP
Sbjct: 101 LSLAQHFGLSVAELDQCLSGVLGSYFGAKYVVGTQLGRELSVQQTNARLVERKQQGVQGP 160
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L S CPG+V YAEK+ + PY+ VKSPQQ+ G+L+ H A+ +IYH++LM
Sbjct: 161 LLCSVCPGFVLYAEKTKPGLV-PYMLDVKSPQQITGALL--HAADP------NIYHLSLM 211
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL----------ATTTLQEEK 293
PC+DKKLEA+R D R+VDCV+T E LL +EL A Q
Sbjct: 212 PCFDKKLEAAREDC------AREVDCVLTPREFVTLL-DELQLDLHSFAGAAVPIAQLTP 264
Query: 294 DGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
G WD P + S G +++L PG + + + RN D+ E
Sbjct: 265 PG-----WD---PRVSWCSSAGSSSGGYAYQYILHMQRLHPGST--IATQAGRNADLLEH 314
Query: 354 TFTCGDVTLRFCIAN--GFRNIQNLIQKL-----------KRKRLPY------------- 387
L GFRNIQNL++KL R+RLP
Sbjct: 315 RLLAPSGVLLASAGELYGFRNIQNLVRKLLSPATKRSAKVVRRRLPQASPAPPATDPCNA 374
Query: 388 DFIEIMACPSGCL 400
DFIE+MACPSGC+
Sbjct: 375 DFIEVMACPSGCI 387
>gi|326391445|ref|ZP_08212981.1| hydrogenase, Fe-only [Thermoanaerobacter ethanolicus JW 200]
gi|325992524|gb|EGD50980.1| hydrogenase, Fe-only [Thermoanaerobacter ethanolicus JW 200]
Length = 581
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 209/417 (50%), Gaps = 51/417 (12%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI I ++ H ++A ++E K +V A
Sbjct: 185 SLKDSPCISCGQCIQVCPVGAIYEKDHT--------RRVYEALADEK-KYVVAQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + +V K+ +R+G D V D A +++E +E L+R +GG P
Sbjct: 236 VALGEEFGMPIGSIVTGKMVAALRRMGFDAVFDTDFAADLTIMEEGSELLERLKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ + EK + EFI +S KSP +MG+L+K++ AEK G++P IY V++M
Sbjct: 296 MITSCSPGWIAFCEKYYPEFI-DNLSTCKSPHMMMGALVKSYYAEKKGLNPEDIYVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KKLE R + + G +DVD V+T EL ++ E+ + + D +DE
Sbjct: 355 PCTAKKLEIERPEMQHN--GIKDVDAVLTTRELARMI-KEMGIDFVN-----LKDEEYDE 406
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IR 351
P M TG+G G V+ A+R + + +VE K L D +R
Sbjct: 407 --PLGM----STGAGVIFGATGGVMEAALRTV----ADIVEGKDLDKFDYEEVRGLEGVR 456
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRN-- 408
EAT + ++ IANG N + L+ K+K + Y FIE+M CP GC+ GG Q I N
Sbjct: 457 EATIRIDGMDVKVAIANGTGNAKKLLDKVKAGEVEYHFIEVMGCPGGCIMGGGQPIHNPN 516
Query: 409 --EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
EKV + A+ + KS +N ++ LY+ +LG ++K H+L+T Y
Sbjct: 517 EMEKVKELRAKAIYEADKNLPIRKS--HKNPAIQKLYEEFLGSPLSEKSHHLLHTHY 571
>gi|357040965|ref|ZP_09102747.1| hydrogenase, Fe-only [Desulfotomaculum gibsoniae DSM 7213]
gi|355355824|gb|EHG03627.1| hydrogenase, Fe-only [Desulfotomaculum gibsoniae DSM 7213]
Length = 672
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 195/409 (47%), Gaps = 22/409 (5%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
E+S DC+ C CIT + +T +S E A KA + +KT+V +A
Sbjct: 184 ELSEVDCINCGQCITVCPTGALTAKSEVE--------QAWKAILDP-SKTVVFQIAPAVR 234
Query: 126 LSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F LS V K+ K+LG D V D A + +E EF+ R G P
Sbjct: 235 VALGEEFGLSAGSAVTGKVVAALKKLGADKVFDTLFAADLTTIEESMEFISRLEKGDKLP 294
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
LFTS CP WV Y E++H + +L IS +SPQQ+ GSL+K H A+ +G P + V++M
Sbjct: 295 LFTSCCPAWVKYCEQAHAD-LLANISSCRSPQQMFGSLVKKHYAQVIGKEPGEVVCVSVM 353
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA+R +F G RDVD V+T VEL ++ A E + D P
Sbjct: 354 PCTAKKFEATRPEFTTG--GVRDVDIVLTTVELAQMIKE--AGIVFNELEPAGFDNPLGM 409
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTL 362
+ ++ SGG +V+ E ++F P+R ++EA L
Sbjct: 410 GSGGALIF---GASGGVMESVVRFVSGYTSGAEIGRIDFYPVRGMQGLKEAEVEVNGQKL 466
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELE 422
+ + NG N + L+Q++K Y +E+MACP GC+ GG Q A+ + +
Sbjct: 467 KLAVVNGIANAEKLVQRIKSGEAGYHAVEVMACPGGCIGGGGQPEVNDTAARVQRLKTIY 526
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
+ + ++N + H+ WL G + H L+T Y +P+ I
Sbjct: 527 NLDTMEQVHKAQDNIYVNHIINQWLNGTGSATVHHELHTRY--VPRRRI 573
>gi|167037864|ref|YP_001665442.1| hydrogenase, Fe-only [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320116281|ref|YP_004186440.1| hydrogenase, Fe-only [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856698|gb|ABY95106.1| hydrogenase, Fe-only [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929372|gb|ADV80057.1| hydrogenase, Fe-only [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 581
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 205/414 (49%), Gaps = 45/414 (10%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI I ++ H + ++A ++E K +V A
Sbjct: 185 SLKDSPCISCGQCIEVCPVGAIYEKDHTK--------RVYEALADEK-KYVVAQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + +V K+ KR+G D V D A +++E +E L+R +GG P
Sbjct: 236 VALGEEFGMPIGSIVTGKMVAALKRMGFDAVFDTDFAADLTIMEEGSELLERLKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ + EK + EFI +S KSP +MG+L+K++ AEK G++P IY V++M
Sbjct: 296 MITSCSPGWIAFCEKYYPEFI-DNLSTCKSPHMMMGALVKSYYAEKKGLNPEDIYIVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KKLE R + + G +DVD V+T EL ++ +E ++ P +E
Sbjct: 355 PCTAKKLEIERPEMQHN--GIKDVDAVLTTRELARMI---------KEMGIDFVNLPDEE 403
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IREAT 354
++ + G V+ A+R + + +VE K L D +REAT
Sbjct: 404 YDEPLGMSTGAAVIFGATGGVMEAALRTV----ADIVEGKDLDKFDYEEVRGLEGVREAT 459
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRN----E 409
++ IANG N + L+ K+K + Y FIE+M CP GC+ GG Q I N E
Sbjct: 460 IRIDGKDIKVAIANGTGNAKKLLDKVKAGEVEYHFIEVMGCPGGCIMGGGQPIHNPNEME 519
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
KV + A+ + KS +N ++ LY+ +LG ++K H+L+T Y
Sbjct: 520 KVKELRAKAIYEADKNLPIRKS--HKNPAIQKLYEEFLGSPLSEKSHHLLHTHY 571
>gi|166031621|ref|ZP_02234450.1| hypothetical protein DORFOR_01321 [Dorea formicigenerans ATCC
27755]
gi|166028598|gb|EDR47355.1| hydrogenase, Fe-only [Dorea formicigenerans ATCC 27755]
Length = 577
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 205/419 (48%), Gaps = 50/419 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I DC C CIT + ++S EV K I + + K +V +A
Sbjct: 183 IREADCALCGQCITHCPVGALRERSDTNEVWKAIEDPD----------KIVVAQVAPAVR 232
Query: 126 LSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---G 181
+ G + L+ E V K+ KR+G++ V D + +++E NEF+ RF SG
Sbjct: 233 AAWGEELGLAPEDATVGKIIDALKRMGINYVFDTTFSADLTIMEEGNEFVKRFTSGELKD 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS ++ Y+S KSPQQ+ G+++KT+ AEKLGV P IY V+
Sbjct: 293 RPMFTSCCPGWVRFI-KSQFPHLVKYLSSAKSPQQMFGAVMKTYFAEKLGVSPEKIYTVS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK E D Y EE D+D VIT EL ++ + A + Q D D P
Sbjct: 352 VMPCVAKKAE-REMDLYYEEYAGHDIDAVITTRELIRMIRS--AHISPQTLVDVESDRPM 408
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLR------NP 348
E GTG+G G V+ A+R + GE+P E F +R N
Sbjct: 409 HE----------GTGAGVIFGATGGVMEAALRSAYYIIKGENPPAEAFTAVRSQGFNEND 458
Query: 349 DIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
++EA F D+T+R + +G N + LI+K++ + YDF+E+MACP GC+ GG Q
Sbjct: 459 GVQEANFQINDITVRTAVVSGLGNTRELIRKIESGEVHYDFVEVMACPGGCVGGGGQ--- 515
Query: 409 EKVASPKETALELETILCDLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ +E A E L L ++ EN + +YK + + K +L+T +
Sbjct: 516 -PIHDGEERAFERGKNLYYLDRNANLRFSHENPDVIQMYKEYFEAPMSHKAHMLLHTEH 573
>gi|376261922|ref|YP_005148642.1| hydrogenase, Fe-only [Clostridium sp. BNL1100]
gi|373945916|gb|AEY66837.1| hydrogenase, Fe-only [Clostridium sp. BNL1100]
Length = 582
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 199/409 (48%), Gaps = 44/409 (10%)
Query: 72 CLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C C CI+ L + E+V + + H +V+ A ++LG
Sbjct: 191 CTMCGQCISVCPVGALREKDDTEKVWSALADKELH----------VVVQTAPAVRVALGE 240
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F L +V K+ +G V D A +++E E L+R +GG P+ TS
Sbjct: 241 EFGLPIGTRVTGKMAAALNHMGFAKVFDTDTAADLTIMEEGTELLNRIKNGGKLPVITSC 300
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGW+ + E ++ EF L +S KSP ++ G+++KT+ AEK+G+ P I+ V++MPC K
Sbjct: 301 SPGWIKFCEHNYPEF-LENLSSCKSPHEMFGAVLKTYYAEKMGIDPKKIFVVSVMPCTAK 359
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K EA R + +G DVD VIT EL ++ E+KD D P
Sbjct: 360 KFEAQRPEL--SAIGLPDVDVVITTRELARMIKESGIDFNNLEDKD--FDDP-------- 407
Query: 309 MLLVNGTGSG---GYAHNVLSHAIR---QLCPGESPVVEFKPLRNPD-IREATFTCGDVT 361
+ N TG+G G V+ A+R ++ G+S +E+ +R + I+EAT GD+
Sbjct: 408 --MGNATGAGVIFGATGGVMEAALRTVSEIVAGKSFDIEYAAVRGIEGIKEATVVIGDMK 465
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVAS------P 414
++ +ANG N + L+ +K YDF+EIMACP GC+NGG Q I+ V S
Sbjct: 466 VKAAVANGLGNARKLLDSIKAGEASYDFVEIMACPGGCVNGGGQPIQPSSVRSWTDLRAE 525
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ A+ E + + KS EN ++ +Y + G + K +L+T Y
Sbjct: 526 RAKAIYEEDVSLPIRKS--HENPVIKEMYDKYFGEPGSHKAHEILHTHY 572
>gi|346307786|ref|ZP_08849916.1| hypothetical protein HMPREF9457_01625 [Dorea formicigenerans
4_6_53AFAA]
gi|345904744|gb|EGX74488.1| hypothetical protein HMPREF9457_01625 [Dorea formicigenerans
4_6_53AFAA]
Length = 577
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 205/419 (48%), Gaps = 50/419 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I DC C CIT + ++S EV K I + + K +V +A
Sbjct: 183 IREADCALCGQCITHCPVGALRERSDTNEVWKAIEDPD----------KIVVAQVAPAVR 232
Query: 126 LSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---G 181
+ G + L+ E V K+ KR+G++ V D + +++E NEF+ RF SG
Sbjct: 233 AAWGEELGLAPEDATVGKIIDALKRMGINYVFDTTFSADLTIMEEGNEFVKRFTSGELKD 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS ++ Y+S KSPQQ+ G+++KT+ AEKLGV P IY V+
Sbjct: 293 RPMFTSCCPGWVRFI-KSQFPHLVKYLSSAKSPQQMFGAVMKTYFAEKLGVSPEKIYTVS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK E D Y EE D+D VIT EL ++ + A + Q D D P
Sbjct: 352 VMPCVAKKAE-REMDLYYEEYAGHDIDAVITTRELIRMIRS--AHISPQTLVDVESDRPM 408
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLR------NP 348
E GTG+G G V+ A+R + GE+P E F +R N
Sbjct: 409 HE----------GTGAGVIFGATGGVMEAALRSAYYIIKGENPPAEAFTAVRSQGFNEND 458
Query: 349 DIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
++EA F D+T+R + +G N + LI+K++ + YDF+E+MACP GC+ GG Q
Sbjct: 459 GVQEANFQINDITVRTAVVSGLGNTRELIRKIESGEVHYDFVEVMACPGGCVGGGGQ--- 515
Query: 409 EKVASPKETALELETILCDLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ +E A E L L ++ EN + +YK + + K +L+T +
Sbjct: 516 -PIHDGEERAFERGKNLYYLDRNANLRFSHENPDVIQMYKEYFEAPMSHKAHMLLHTEH 573
>gi|304316579|ref|YP_003851724.1| hydrogenase, Fe-only [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778081|gb|ADL68640.1| hydrogenase, Fe-only [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 581
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 205/423 (48%), Gaps = 63/423 (14%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI + I ++ H +++ + A +E K +V+ A
Sbjct: 185 SLNDSPCISCGQCIEACPVGAIYEKDHTKMV--------YDALLDEK-KYVVVQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + + +V K+ KRLG D V D A +++E NE L R GG P
Sbjct: 236 VALGEEFGMPYGSIVTGKMVSALKRLGFDKVFDTDFAADLTIIEEGNELLKRINEGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ Y E+ + EFI +S KSP +MG++IK++ AEK G+ P I+ V++M
Sbjct: 296 MITSCSPGWINYCERYYPEFI-DNLSTCKSPHMMMGAIIKSYFAEKEGIDPKDIFVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK E R + G +DVD V+T EL ++ ++ ++ P E
Sbjct: 355 PCTAKKYEIDRPQMMTD--GMKDVDAVLTTRELARMI---------KQSGIDFVNLPDSE 403
Query: 304 H-NPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------I 350
+ NP L +G+G G V+ A+R + + +VE K + N + I
Sbjct: 404 YDNP----LGESSGAGVIFGATGGVMEAALRTV----ADIVEGKDIENFEYKEVRGLEGI 455
Query: 351 REATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ----- 405
REA G ++ IANG N + L+ K+K Y FIE+M CP GC+ GG Q
Sbjct: 456 REANINIGGKEIKVAIANGTGNAKKLLDKIKNGEAEYHFIEVMGCPGGCIMGGGQPIHNP 515
Query: 406 -----IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
+RN+++ + E DL + +N + LY+ +L +K H+L+
Sbjct: 516 NEKDLVRNKRLNAIYEADK-------DLPIRKSHKNPMITKLYEEFLISPLGEKSHHLLH 568
Query: 461 TSY 463
TSY
Sbjct: 569 TSY 571
>gi|219668075|ref|YP_002458510.1| hydrogenase, Fe-only [Desulfitobacterium hafniense DCB-2]
gi|219538335|gb|ACL20074.1| hydrogenase, Fe-only [Desulfitobacterium hafniense DCB-2]
Length = 1150
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 208/413 (50%), Gaps = 33/413 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC++C C+ + + +S E+ +V R + N+ KT V +A +
Sbjct: 670 TDCVSCGQCVNACPCGALDYRS--EIGRVFR-------AINDPGKTTVAFVAPAVRSVVS 720
Query: 130 AKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+++ +S+++ + G K++G D V D A ++VE EFL R S P FTS
Sbjct: 721 SQYGVSYQEASRFIAGLLKKIGFDKVFDFTFAADLTIVEETTEFLTRLQSHKPIPQFTSC 780
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CPGWV + E+ + E I+PY+S KSPQ +MG+ +K H E + P +Y V+++PC K
Sbjct: 781 CPGWVNFVERRYPE-IIPYLSSCKSPQMMMGATVKNHFTELTEIDPKDLYVVSIVPCIAK 839
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K EA+R +F +E G RDVD V+T+ E+ E+A L E D P D P++
Sbjct: 840 KYEAARPEFRSE--GIRDVDAVLTSTEM-----LEMADIKLIEPAD---VEPQDFCEPYK 889
Query: 309 MLLVNGTG-----SGGYAHNVLSHAIRQLCPGE--SPVVEFKPLRN-PDIREATFTCGDV 360
V+G G SGG A L A+ +L GE + ++++ +R I+EA
Sbjct: 890 R--VSGAGILFGASGGVAEAALRMAVEKLT-GEVLTDQLDYQEVRGLQGIKEAAVEAKGK 946
Query: 361 TLRFCIANGFRNIQNLIQK-LKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
+ + +G N++ +++K ++ + YD IE+MACP GC+ G EK+ + ++
Sbjct: 947 KVNVAVISGLHNVEPILEKIIEGMEVGYDLIEVMACPGGCICGAGHPVPEKIDTLEKRQQ 1006
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIA 472
L I + +EN + LY + G ++ +L+T Y + + +A
Sbjct: 1007 VLVNIDQTSRYRKSQENPDILRLYDEYYGEANSPLAHKLLHTHYEAVKREPVA 1059
>gi|302387722|ref|YP_003823544.1| hydrogenase, Fe-only [Clostridium saccharolyticum WM1]
gi|302198350|gb|ADL05921.1| hydrogenase, Fe-only [Clostridium saccharolyticum WM1]
Length = 581
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 192/405 (47%), Gaps = 31/405 (7%)
Query: 70 TDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + L + S +EV I + + H +++ A L
Sbjct: 189 TSCVSCGQCIAVCPTGALYEKSSIDEVAAAIADRSKH----------VIVQTAPAVRAGL 238
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F V K+ +RLG D V D + +++E +EF+DR +GG P+ T
Sbjct: 239 GEEFGYPIGTNVEGKMAAALRRLGFDKVFDTNFSADLTIMEEAHEFIDRVQNGGVLPMIT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ Y E + + +S KSPQQ+ G++ K++ AEK+G+ P I V++MPC
Sbjct: 299 SCSPGWIKYCEHYFPD-MTENLSSCKSPQQMFGAIAKSYYAEKMGLKPEDIVSVSVMPCT 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R D + G DVD +T EL ++ A E D D P
Sbjct: 358 AKKFEIGRDD--QDANGSPDVDYSMTTRELARMIKQ--AGIRFTELPDEDFDTPLGLGTG 413
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ +GG L A+ L E EF +R I+EA++ GD+ +
Sbjct: 414 AAVIF---GATGGVMEAALRTAVESLTGEELEKPEFTDVRGTKGIKEASYRVGDMDVNVA 470
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKETA 418
+A+G N + L+ ++K Y FIEIM CP GC+NGG Q +RN + S +
Sbjct: 471 VASGLGNARELLNRVKSGEANYHFIEIMGCPGGCVNGGGQPQQPGYVRNTTDIRSLRAKV 530
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L E + KS EN ++ LY+ +LG ++K H+L+T+Y
Sbjct: 531 LYDEDAAKTIRKS--HENPAIKELYETFLGEPGSEKAHHLLHTTY 573
>gi|256750971|ref|ZP_05491854.1| hydrogenase, Fe-only [Thermoanaerobacter ethanolicus CCSD1]
gi|256750081|gb|EEU63102.1| hydrogenase, Fe-only [Thermoanaerobacter ethanolicus CCSD1]
Length = 581
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 205/414 (49%), Gaps = 45/414 (10%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI I ++ H + ++A ++E K +V A
Sbjct: 185 SLKDSPCISCGQCIVVCPVGAIYEKDHTK--------RVYEALADEK-KYVVAQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + +V K+ +R+G D + D A +++E +E L+R +GG P
Sbjct: 236 VALGEEFGMPIGSIVTGKMVAALRRMGFDAIFDTNFAADLTIMEEGSELLERLKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ + EK + EFI +S KSP +MG+L+K++ AEK G++P IY V++M
Sbjct: 296 MITSCSPGWIAFCEKYYPEFI-DNLSTCKSPHMMMGALVKSYYAEKKGLNPEDIYIVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KKLE R + + G +DVD V+T EL ++ +E ++ P +E
Sbjct: 355 PCTAKKLEIERPEMQHN--GIKDVDAVLTTRELARMI---------KEMGIDFVNLPDEE 403
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IREAT 354
++ + G V+ A+R + + +VE K L D +REAT
Sbjct: 404 YDEPLGMSTGAAVIFGATGGVMEAALRTV----ADIVEGKDLDKFDYEEVRGLEGVREAT 459
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRN----E 409
++ IANG N + L+ K+K + Y FIE+M CP GC+ GG Q I N E
Sbjct: 460 IRIDGKDIKVAIANGTGNAKKLLDKVKAGEVEYHFIEVMGCPGGCIMGGGQPIHNPNEME 519
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
KV + A+ + KS +N ++ LY+ +LG ++K H+L+T Y
Sbjct: 520 KVKELRAKAIYEADKNLPIRKS--HKNPAIQKLYEEFLGSPLSEKSHHLLHTHY 571
>gi|365844590|ref|ZP_09385427.1| putative ferredoxin hydrogenase HydA1 [Flavonifractor plautii ATCC
29863]
gi|364564250|gb|EHM42022.1| putative ferredoxin hydrogenase HydA1 [Flavonifractor plautii ATCC
29863]
Length = 584
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 205/411 (49%), Gaps = 34/411 (8%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+++ DC++C CI + + ++++ ++ +V+ A+ N+ K +V+ A
Sbjct: 187 DLAEVDCVSCGQCIVACPTGALSEK--DDTARVL-------AALNDPAKHVVVGPAPSIR 237
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
++LG F L V K+ +RLG D V DV A F+++E EFL R L+GGG
Sbjct: 238 VTLGECFGLPIGTNVEGKMVTALRRLGFDKVFDVDTAADFTILEEGTEFLSR-LNGGGTL 296
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PL TS PGWV Y E+ H ++ IS KSPQQ+ GSL+KT+ AE+ G+ P I+ V++
Sbjct: 297 PLITSCSPGWVRYLEQ-HAPDMIRNISSCKSPQQMFGSLVKTYYAEQAGIDPQDIFVVSI 355
Query: 243 MPCYDKKLEASRADFYNEEL--GYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
MPC KK E R + + L G VD +T EL ++ A + DG D
Sbjct: 356 MPCTAKKYEVLREE---QRLPNGCMPVDVSLTTRELGRMITQ--AGLLFEHLPDGAFDPM 410
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
+ SGG L + QL +E++ +R + ++EA++
Sbjct: 411 LGVSTGAAAIF---GASGGVMEAALRTVVEQLTGAGMAPLEYQEVRGMEGVKEASYELPG 467
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVA 412
T+R C+A+G N++ ++ ++ L YDF+E MACP GC+NGG Q +RN +
Sbjct: 468 KTVRVCVASGLHNVKRVLDGIRDGSLQYDFVEFMACPGGCINGGGQPIQHANVRNFTDIK 527
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ + AL + +S EN ++ +Y +LG K +L+ SY
Sbjct: 528 ALRAAALYKQDEGMTYRRSH--ENPVVQKVYADFLGEPGGHKAHALLHCSY 576
>gi|167040761|ref|YP_001663746.1| hydrogenase, Fe-only [Thermoanaerobacter sp. X514]
gi|300914799|ref|ZP_07132115.1| hydrogenase, Fe-only [Thermoanaerobacter sp. X561]
gi|307723967|ref|YP_003903718.1| hydrogenase, Fe-only [Thermoanaerobacter sp. X513]
gi|166855001|gb|ABY93410.1| hydrogenase, Fe-only [Thermoanaerobacter sp. X514]
gi|300889734|gb|EFK84880.1| hydrogenase, Fe-only [Thermoanaerobacter sp. X561]
gi|307581028|gb|ADN54427.1| hydrogenase, Fe-only [Thermoanaerobacter sp. X513]
Length = 581
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 205/414 (49%), Gaps = 45/414 (10%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI I ++ H + ++A ++E K +V A
Sbjct: 185 SLKDSPCISCGQCIEVCPVGAIYEKDHTK--------RVYEALADEK-KYVVAQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + +V K+ +R+G D + D A +++E +E L+R +GG P
Sbjct: 236 VALGEEFGMPIGSIVTGKMVAALRRMGFDAIFDTNFAADLTIMEEGSELLERLKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ + EK + EFI +S KSP +MG+L+K++ AEK G++P IY V++M
Sbjct: 296 MITSCSPGWIAFCEKYYPEFI-DNLSTCKSPHMMMGALVKSYYAEKKGLNPEDIYIVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KKLE R + + G +DVD V+T EL ++ +E ++ P +E
Sbjct: 355 PCTAKKLEIERPEMQHN--GIKDVDAVLTTRELARMI---------KEMGIDFVNLPDEE 403
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IREAT 354
++ + G V+ A+R + + +VE K L D +REAT
Sbjct: 404 YDEPLGMSTGAAVIFGATGGVMEAALRTV----ADIVEGKDLDKFDYEEVRGLEGVREAT 459
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRN----E 409
++ IANG N + L+ K+K + Y FIE+M CP GC+ GG Q I N E
Sbjct: 460 IRIDGKDIKVAIANGTGNAKKLLDKVKAGEVEYHFIEVMGCPGGCIMGGGQPIHNPNEME 519
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
KV + A+ + KS +N ++ LY+ +LG ++K H+L+T Y
Sbjct: 520 KVKELRAKAIYEADKNLPIRKS--HKNPAIQKLYEEFLGSPLSEKSHHLLHTHY 571
>gi|153814131|ref|ZP_01966799.1| hypothetical protein RUMTOR_00340 [Ruminococcus torques ATCC 27756]
gi|145848527|gb|EDK25445.1| hydrogenase, Fe-only [Ruminococcus torques ATCC 27756]
Length = 595
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 197/405 (48%), Gaps = 31/405 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C+ C CI + + + ++S+ ++V+ I + TK +V+ A +L
Sbjct: 205 TSCVGCGQCIAACPTGALYEKSNIDDVLAAIADE----------TKHVVVQPAPSVRAAL 254
Query: 129 GAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F V K+ +R+G D V D + +++E +EFLDR + G PL T
Sbjct: 255 GEEFGYPMGTDVEGKMAAALRRIGFDKVFDTNFSADLTIMEEAHEFLDRVKNKGVLPLMT 314
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV Y E + + L ++S KSPQQ+ G++ KT+ AEK+ + P I V++MPC
Sbjct: 315 SCSPGWVKYCEHYYPDQ-LDHLSSCKSPQQMFGAITKTYYAEKMNIAPEDIVCVSVMPCT 373
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R D + G DVD IT EL L+ + D D P E
Sbjct: 374 AKKFEIQRED--QDAGGVPDVDISITTRELARLIRK--VGINFRSLPDEGFDDPLGESTG 429
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ +GG L A+ +L VEF +R + I+EA + + ++
Sbjct: 430 AGVIF---GATGGVMEAALRTAVEELTGETLEKVEFTEVRGTEGIKEAVYNVAGMDVKVA 486
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKETA 418
+A+G N + ++ K++ K Y F+EIM CP GC+NGG Q +RN E V + +
Sbjct: 487 VASGLSNAKIIMDKIRAKEADYHFVEIMCCPGGCVNGGGQPQVHADVRNFEDVKAIRAKV 546
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L L KS EN +++ +Y +LG ++K H+L+T+Y
Sbjct: 547 LYDNDAAKTLRKS--HENPSIKRVYSEYLGEPGSEKAHHILHTTY 589
>gi|433654713|ref|YP_007298421.1| hydrogenase, Fe-only [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433292902|gb|AGB18724.1| hydrogenase, Fe-only [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 581
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 205/423 (48%), Gaps = 63/423 (14%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI + I ++ H +++ + A +E K +V+ A
Sbjct: 185 SLNDSPCISCGQCIEACPVGAIYEKDHTKMV--------YDALLDEK-KYVVVQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + + +V K+ KRLG D V D A +++E NE L R GG P
Sbjct: 236 VALGEEFGMPYGSIVTGKMVSALKRLGFDKVFDTDFAADLTIIEEGNELLKRINEGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ Y E+ + E+I +S KSP +MG++IK++ AEK G+ P I+ V++M
Sbjct: 296 MITSCSPGWINYCERYYPEYI-ENLSTCKSPHMMMGAIIKSYFAEKEGIDPKDIFVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK E R + G +DVD V+T EL ++ ++ ++ P E
Sbjct: 355 PCTAKKYEIDRPQMIVD--GMKDVDAVLTTRELARMI---------KQSGIDFVNLPDSE 403
Query: 304 H-NPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------I 350
+ NP L +G+G G V+ A+R + + +VE K + N + I
Sbjct: 404 YDNP----LGESSGAGVIFGATGGVMEAALRTV----ADIVEGKDIENFEYKEVRGLEGI 455
Query: 351 REATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ----- 405
REA G ++ IANG N + L+ K+K Y FIE+M CP GC+ GG Q
Sbjct: 456 REANINIGGKEIKVAIANGTGNAKKLLDKIKNGEAEYHFIEVMGCPGGCIMGGGQPIHNP 515
Query: 406 -----IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
+RN+++ + E DL + +N + LYK +L +K H+L+
Sbjct: 516 NEKDLVRNKRLNAIYEADK-------DLPIRKSHKNPMITKLYKEFLISPLGEKSHHLLH 568
Query: 461 TSY 463
TSY
Sbjct: 569 TSY 571
>gi|317499936|ref|ZP_07958172.1| hydrogenase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087841|ref|ZP_08336766.1| hypothetical protein HMPREF1025_00349 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438264|ref|ZP_08617904.1| hypothetical protein HMPREF0990_00298 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316898653|gb|EFV20688.1| hydrogenase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330409536|gb|EGG88977.1| hypothetical protein HMPREF1025_00349 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336014070|gb|EGN43933.1| hypothetical protein HMPREF0990_00298 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 580
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 197/405 (48%), Gaps = 31/405 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C+ C CI + + + ++S+ ++V+ I + TK +V+ A +L
Sbjct: 190 TSCVGCGQCIAACPTGALYEKSNIDDVLAAIADE----------TKHVVVQPAPSVRAAL 239
Query: 129 GAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F V K+ +R+G D V D + +++E +EFLDR + G PL T
Sbjct: 240 GEEFGYPMGTDVEGKMAAALRRIGFDKVFDTNFSADLTIMEEAHEFLDRVKNKGVLPLMT 299
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV Y E + + L ++S KSPQQ+ G++ KT+ AEK+ + P I V++MPC
Sbjct: 300 SCSPGWVKYCEHYYPDQ-LDHLSSCKSPQQMFGAITKTYYAEKMNIAPEDIVCVSVMPCT 358
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R D + G DVD IT EL L+ + D D P E
Sbjct: 359 AKKFEIQRED--QDAGGVPDVDISITTRELARLIRK--VGINFRSLPDEGFDDPLGESTG 414
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ +GG L A+ +L VEF +R + I+EA + + ++
Sbjct: 415 AGVIF---GATGGVMEAALRTAVEELTGETLEKVEFTEVRGTEGIKEAVYNVAGMDVKVA 471
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKETA 418
+A+G N + ++ K++ K Y F+EIM CP GC+NGG Q +RN E V + +
Sbjct: 472 VASGLSNAKIIMDKIRAKEADYHFVEIMCCPGGCVNGGGQPQVHADVRNFEDVKAIRAKV 531
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L L KS EN +++ +Y +LG ++K H+L+T+Y
Sbjct: 532 LYDNDAAKTLRKS--HENPSIKRVYSEYLGEPGSEKAHHILHTTY 574
>gi|242032963|ref|XP_002463876.1| hypothetical protein SORBIDRAFT_01g008090 [Sorghum bicolor]
gi|241917730|gb|EER90874.1| hypothetical protein SORBIDRAFT_01g008090 [Sorghum bicolor]
Length = 222
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 137/233 (58%), Gaps = 29/233 (12%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M+SSRFS VLQ +DL+DFI PSQ+CI I + K T + R+Q+ + T +
Sbjct: 1 MSSSRFSPVLQASDLNDFIAPSQDCI--ISLNK----NTSSSRRLQNKQK--ETTVSSKP 52
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
+ V+ISL DCLACSGCITSAE+V++ +QS + + I + K +++S+
Sbjct: 53 PEEAVKISLKDCLACSGCITSAETVMLEKQSLGDFIDRINSD-----------KAVIVSV 101
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF--- 177
+ Q SL A F LS QV+ KL K +GV V D + SL+E NEF+ R+
Sbjct: 102 SPQSRASLAAFFGLSQSQVLRKLTALLKSIGVKAVFDTSSSRDLSLIEACNEFVSRYEKN 161
Query: 178 LSGGG-------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK 223
S G P+ +S CPGW+CYAEK+ G +ILPYIS VKSPQQ +G+ IK
Sbjct: 162 QSSSGKEAGANLPMISSACPGWICYAEKTLGSYILPYISSVKSPQQAIGAAIK 214
>gi|366162677|ref|ZP_09462432.1| hydrogenase, Fe-only [Acetivibrio cellulolyticus CD2]
Length = 1145
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 218/425 (51%), Gaps = 45/425 (10%)
Query: 56 NGREEKLKKVEISL--TDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNEN 112
NGR+ K + L TDC++C C+T+ L ++ +VM+ I N++
Sbjct: 653 NGRQLVGTKSGLPLQQTDCVSCGQCVTACPCGALDYRRDKGKVMRAI----------NDH 702
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENE 172
KT+V +A + + + E+ + G K+LG D V D A ++VE E
Sbjct: 703 KKTVVAFVAPAVRSLISKTYNVPFEEASPFMAGLLKKLGFDKVFDFTFAADLTIVEETTE 762
Query: 173 FLDRFLSGG-GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
FL R + G P FTS CPGWV + EK + E I+P++S KSPQ +MG+ +K H A+ G
Sbjct: 763 FLTRVSNKGVMPQFTSCCPGWVNFVEKRYPE-IIPHLSSCKSPQMMMGATVKNHYAKLAG 821
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQE 291
+ ++ V+++PC KK EA+R +F E G RDVD V+T E+ ++ +L + E
Sbjct: 822 LDKKDLFVVSIVPCLAKKHEAARPEFAPE--GIRDVDAVLTTTEMIEMV--KLENIDISE 877
Query: 292 EKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGE--SPVVEFKP 344
++ +DE P+R V+G G SGG A L A+ +L G+ + ++F+
Sbjct: 878 ----VVPQEFDE--PYRQ--VSGAGILFGASGGVAEAALRMAVEKLT-GKVLTDHLDFEE 928
Query: 345 LRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRK-RLPYDFIEIMACPSGCLNG 402
+R D ++EAT +R + +G N + +++K+ + + YD IE+MACP GC+ G
Sbjct: 929 IRGFDGVKEATVDVDSTKVRVAVVSGLHNAEPIVEKIIQGIDVGYDLIEVMACPGGCICG 988
Query: 403 GAQIRNEKVASPKETALELETILCDLAK----SEPRENATLEHLYKAWLGGKSTDKGKHM 458
EK+ + A + + IL ++ K + +EN + LY + G ++ +
Sbjct: 989 AGHPVPEKI----DAAEKRQQILVNIDKVSKYRKSQENPDILRLYDEFYGEANSHLAHEL 1044
Query: 459 LNTSY 463
L+T Y
Sbjct: 1045 LHTHY 1049
>gi|302875113|ref|YP_003843746.1| hydrogenase, Fe-only [Clostridium cellulovorans 743B]
gi|307690261|ref|ZP_07632707.1| hydrogenase, Fe-only [Clostridium cellulovorans 743B]
gi|302577970|gb|ADL51982.1| hydrogenase, Fe-only [Clostridium cellulovorans 743B]
Length = 579
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 203/403 (50%), Gaps = 27/403 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+C C C+ + + + + E+ A +E+ K +++ A +LG
Sbjct: 194 TNCTNCGQCVAVCPTGALRETNDED--------RVWDALDDED-KYVIVQTAPAIRAALG 244
Query: 130 AKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F L V K+ K LG V D A +++E NE ++R + PL TS
Sbjct: 245 EQFGLKPGTNVTGKMVSVLKALGFKKVYDTDFAADLTIMEEANELVNRIKNNKDLPLLTS 304
Query: 188 ECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
CPGW+ + E ++GEF+ LP S KSPQQ+ G++ K++LAEKLGV P + V++MPC
Sbjct: 305 CCPGWIKFLEHNYGEFLNLP--SSCKSPQQMFGAIAKSYLAEKLGVDPKKMVVVSIMPCT 362
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EASR + E G RDVD V+T EL ++ + A L + +D D P E
Sbjct: 363 AKKFEASRKEM--EVDGIRDVDIVLTTRELSSMIRS--AGLDLNDFEDDDFDNPLGESTG 418
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ N SGG L A + + ++F+ +R D I+ AT GD+ L+
Sbjct: 419 AAVIFGN---SGGVMEAALRTAYELITDQKLEKIDFQAVRGLDGIKSATIKIGDLDLKIA 475
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNEKVASPKETALELET 423
+A+G N + L++ +K Y IEIMACP GC++GG Q IR ++ K TA+
Sbjct: 476 VASGLGNARKLMESIKNGENQYAAIEIMACPGGCIDGGGQPFIRGDREILKKRTAVLYNV 535
Query: 424 ILC-DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
D+ KS E+ ++ +Y +L + +K +L+T Y N
Sbjct: 536 DEGKDIRKS--HESPIIKEIYNKYLIEANGEKAHKLLHTHYKN 576
>gi|367013987|ref|XP_003681493.1| hypothetical protein TDEL_0E00390 [Torulaspora delbrueckii]
gi|359749154|emb|CCE92282.1| hypothetical protein TDEL_0E00390 [Torulaspora delbrueckii]
Length = 476
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 154/510 (30%), Positives = 233/510 (45%), Gaps = 105/510 (20%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P C+KP ++K + +T +I + + + +L+KV
Sbjct: 1 MSALLSEQDLNDFISPGLACVKPTEVKKVNEEQT-TEIEVGKEAS----------ELEKV 49
Query: 66 EISLTDCLACSGCITSAESVLITQQSHE---EVMKVIRENNAHKASSNENTKTIVLSLAI 122
ISL DCLAC+GCITS+E +L+++QSH E K +R+ + + +S++
Sbjct: 50 SISLQDCLACAGCITSSEEILLSRQSHTVFVEAWKNLRDE-----------RQLAVSISP 98
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSLVELENEFLDRFLSG- 180
Q +SL + L+ E + L FK G + + ++ E + G
Sbjct: 99 QSRISLADYYGLTLETLDLTLLNLFKVYFGCRYFVGTQMGRNLTISRSNQELISLKQQGE 158
Query: 181 --GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
P ++ CPG+V YAEK+ E + PY+ VKSPQQ+ GSL+K EKL Y
Sbjct: 159 LAKKPKLSAVCPGFVLYAEKTKPELV-PYLLNVKSPQQITGSLLKMSSNEKL-------Y 210
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD 298
H+++MPC+DKKLEASR D G ++VDCVIT E+ T LQE + I
Sbjct: 211 HLSIMPCFDKKLEASRPD------GEKEVDCVITPREV---------VTMLQELQIDINQ 255
Query: 299 WPWDEHNPHRMLLVNG------------TGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR 346
+ ++ + L G + SGG+A+ + V+E K
Sbjct: 256 YKSEDQALRKALSPLGWDPILHWSSNEGSSSGGFAYQYILEMYHLYPESALQVLEGK--- 312
Query: 347 NPDIREATFTCGDVTLRFCIAN-----GFRNIQNLIQKLK----RKRLPY---------- 387
N D+RE T D+ IA+ GFRNIQN+++KL R R P
Sbjct: 313 NSDLREYRLT--DLANGQTIASATELYGFRNIQNMVRKLTQRSIRPRNPRLLKNRQATSS 370
Query: 388 -------------DFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR 434
DFIE+MACP GC+NGG + + ++ A+ + I+ L +
Sbjct: 371 ASTKPAIADPTNTDFIEVMACPGGCINGGGLLSKDSASNSTSNAVRKKAIIDHLNARYTQ 430
Query: 435 ENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
E ++ A G+ D SYH
Sbjct: 431 EMVNID----ARTMGQEIDHRSTSHTLSYH 456
>gi|239905421|ref|YP_002952160.1| Fe hydrogenase [Desulfovibrio magneticus RS-1]
gi|239795285|dbj|BAH74274.1| putative Fe hydrogenase [Desulfovibrio magneticus RS-1]
Length = 685
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 192/400 (48%), Gaps = 24/400 (6%)
Query: 71 DCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
+C+ C C + L+ + +EV+ + + TKT+V +A + LG
Sbjct: 189 ECVGCGQCANVCPTGALVPRSEMDEVLTAL----------ADPTKTVVAQVAPAVRVGLG 238
Query: 130 AKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
FA + + V+ ++ KRLG D V D A +++E EFL R +G P FTS
Sbjct: 239 ECFASPAGDPVMGRMVAALKRLGFDAVYDTTFAADLTVIEEGQEFLTRAAAGEKLPQFTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV +AE+S E +LP +S +SPQQ+ GSL+K L EK G+ + V++MPC
Sbjct: 299 CCPGWVQFAEQSFPE-LLPNLSSCRSPQQMFGSLVKEMLPEKQGIARKDLIVVSIMPCTA 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWDEHNP 306
KK EA R +F + G DVD V+T EL ++ L +L+ E LD P+
Sbjct: 358 KKFEARRPEFAVD--GSPDVDFVLTTQELARMIDGAGLRFNSLEPES---LDMPFGFGTG 412
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR-NPDIREATFTCGDVTLRFC 365
++ SGG VL A ++ V+F +R + +REAT G TLR
Sbjct: 413 AGVIF---GASGGVTEAVLRFAAEKITGKPLASVDFAEVRGDSGLREATLEVGGKTLRLA 469
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETIL 425
I +G N + + +++ YD IE+MACP GC+ G Q + +A K +L
Sbjct: 470 IVHGLANARAVAEQVVAGNSEYDLIEVMACPGGCIGGAGQPVPKDLADRKRRTKDLYQCD 529
Query: 426 CDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ ++N + Y +LG K +L+T Y +
Sbjct: 530 KTFPLHKAQDNMFVTECYDKFLGDVGGHKAHSLLHTHYQS 569
>gi|168180425|ref|ZP_02615089.1| [Fe] hydrogenase [Clostridium botulinum NCTC 2916]
gi|421837509|ref|ZP_16271670.1| iron hydrogenase 1 [Clostridium botulinum CFSAN001627]
gi|182668697|gb|EDT80675.1| [Fe] hydrogenase [Clostridium botulinum NCTC 2916]
gi|409740335|gb|EKN40640.1| iron hydrogenase 1 [Clostridium botulinum CFSAN001627]
Length = 577
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 201/408 (49%), Gaps = 33/408 (8%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA--SSNENTKTIVLSLAIQP 124
I T+C C C++ + +T+ NN K + ++ K +++ A
Sbjct: 191 IKNTNCTFCGQCVSVCPTGALTEV-----------NNTSKVWDALSQKDKVVIVQTAPAI 239
Query: 125 VLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F L V K+ ++LG V D A +++E +EF+ R GG
Sbjct: 240 RAALGEEFGLEPGTAVTGKMVAALRQLGFSKVFDTDFAADLTIMEEASEFIHRLEHGGTL 299
Query: 183 PLFTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS CPGW+ + E + + + +P S KSPQQ+ G++ K++LAEK+ V P I V+
Sbjct: 300 PMLTSCCPGWIKFFEHNFNDLMDIP--SSCKSPQQMFGAIAKSYLAEKMKVDPKDIIVVS 357
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA R + G DVD VI+ EL ++++ + +LQEE+ D P
Sbjct: 358 VMPCLAKKYEAKREEMKRN--GIPDVDIVISTRELAKMIVEAGIDFNSLQEEE---FDNP 412
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
E ++ GT +GG L A + G VEF +R D IREAT D
Sbjct: 413 LGESTGASVIF--GT-TGGVMEAALRTAYEWVTKGTLKDVEFIEVRGEDGIREATVNIKD 469
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
++ IA+G N + L+ ++ + Y IEIMACPSGC++GG Q + + +
Sbjct: 470 TEVKVAIASGLGNARKLLNDIRNGKSKYHMIEIMACPSGCVDGGGQPYIYGDTNILKKRT 529
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
AL E ++ KS EN ++ LY+ +LG +K +L+T Y
Sbjct: 530 EALYKEDSNKEIRKS--HENPYIKKLYEEYLGKPYGEKAHELLHTKYR 575
>gi|226949091|ref|YP_002804182.1| iron hydrogenase 1 [Clostridium botulinum A2 str. Kyoto]
gi|226843824|gb|ACO86490.1| iron hydrogenase 1 [Clostridium botulinum A2 str. Kyoto]
Length = 577
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 200/408 (49%), Gaps = 33/408 (8%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I T+C C C++ + +T+ NN K + K V+ + P +
Sbjct: 191 IKNTNCTFCGQCVSVCPTGALTEV-----------NNTSKVWDALSQKDKVVIVQTAPAI 239
Query: 127 --SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F L V K+ ++LG V D A +++E +EF+ R GG
Sbjct: 240 RAALGEEFGLEPGTAVTGKMVAALRQLGFSKVFDTDFAADLTIMEEASEFIHRLEHGGTL 299
Query: 183 PLFTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS CPGW+ + E + + + +P S KSPQQ+ G++ K++LAEK+ V P I V+
Sbjct: 300 PMLTSCCPGWIKFFEHNFNDLMDIP--SSCKSPQQMFGAIAKSYLAEKMKVDPKDIIVVS 357
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA R + G DVD VI+ EL ++++ + +LQEE+ D P
Sbjct: 358 VMPCLAKKYEAKREEMKRN--GIPDVDIVISTRELAKMIVEAGIDFNSLQEEE---FDNP 412
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
E ++ GT +GG L A + G VEF +R D IREAT D
Sbjct: 413 LGESTGASVIF--GT-TGGVMEAALRTAYEWVTKGTLKDVEFIEVRGEDGIREATVNIKD 469
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
++ IA+G N + L+ ++ + Y IEIMACPSGC++GG Q + + +
Sbjct: 470 TEVKVAIASGLGNARKLLNDIRNGKSKYHMIEIMACPSGCVDGGGQPYIYGDTNILKKRT 529
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
AL E ++ KS EN ++ LY+ +LG +K +L+T Y
Sbjct: 530 EALYKEDSNKEIRKS--HENPYIKKLYEEYLGKPYGEKAHELLHTKYR 575
>gi|220931030|ref|YP_002507938.1| NADH dehydrogenase I subunit G [Halothermothrix orenii H 168]
gi|219992340|gb|ACL68943.1| NADH dehydrogenase I subunit G [Halothermothrix orenii H 168]
Length = 666
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 209/420 (49%), Gaps = 41/420 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
DC+AC C+ + +T +S ++ +V + N+ KT+V+ +A +++G
Sbjct: 187 VDCVACGQCVAVCPTGALTIKS--DISRVWE-------AINDPAKTVVVQIAPAVRVAIG 237
Query: 130 AKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F + ++ + +L KRLG D V D A +++E EF++RF G P FTS
Sbjct: 238 EEFGMEPGEIQMGQLVAALKRLGFDKVFDTSFAADLTVMEETAEFIERFKEGKKLPQFTS 297
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV YAE+ +F L +S KSPQQ+ GS+ K ++ LG+ P + V++MPC
Sbjct: 298 CCPAWVKYAEEYAQDF-LDNLSSCKSPQQMFGSVAKRFYSQDLGIDPEDMVVVSIMPCTA 356
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI--LDWPWDEHN 305
KK EA R +F + G DVD VIT E+ A+ + + L + GI LD P
Sbjct: 357 KKFEAQRPEFITD--GVPDVDVVITTQEV----ASMIKKSGLVFSELGIESLDMP----- 405
Query: 306 PHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
+ G G +GG + VL +A ++ VEFK +R D I+EA
Sbjct: 406 ---LGFSTGAGVIFGVTGGVSEAVLRNAYEKITGDNLDDVEFKEVRGFDGIKEAEVELDG 462
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNEKVASPKET 417
T+R + +G N+ +LI+ +K+ YD IE+MACP GC+ GG Q N +V +
Sbjct: 463 KTVRLAVVHGLSNVGDLIKAIKKGEKEYDLIEVMACPGGCIGGGGQPTPNNTEVREKRAQ 522
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY---HNIPKNNIALN 474
+ L L KS+ EN + Y+ W G +++D L+TSY I I LN
Sbjct: 523 GMYNCDKLSALHKSQ--ENPMVNDFYRRWFGEENSDVTHKHLHTSYEEKQRINTKGIELN 580
>gi|168184519|ref|ZP_02619183.1| iron hydrogenase 1 [Clostridium botulinum Bf]
gi|237795251|ref|YP_002862803.1| [Fe] hydrogenase [Clostridium botulinum Ba4 str. 657]
gi|182672373|gb|EDT84334.1| iron hydrogenase 1 [Clostridium botulinum Bf]
gi|229262419|gb|ACQ53452.1| [Fe] hydrogenase [Clostridium botulinum Ba4 str. 657]
Length = 577
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 203/408 (49%), Gaps = 33/408 (8%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA--SSNENTKTIVLSLAIQP 124
I T+C C C++ + +T+ NN K + ++ K +++ A
Sbjct: 191 IKNTNCTFCGQCVSVCPTGTLTEV-----------NNTSKVWDALSQKDKVVIVQTAPAI 239
Query: 125 VLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F L +V K+ ++LG + V D A +++E +EF+ R GG
Sbjct: 240 RAALGEEFGLEPGTRVTGKMVSALRQLGFNKVFDTDFAADLTIMEEASEFIHRLEHGGTL 299
Query: 183 PLFTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS CPGW+ + E + + + +P S KSPQQ+ G++ K++LAEK+ V P I V+
Sbjct: 300 PMLTSCCPGWIKFFEHNFNDLMDIP--SSCKSPQQMFGTIAKSYLAEKMKVDPKDIIVVS 357
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA R + G DVD VI+ EL ++++ + +LQEE+ D P
Sbjct: 358 VMPCLAKKYEAKREEMKRN--GIPDVDIVISTRELSKMIIEAGIDFNSLQEEE---FDNP 412
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
E ++ GT +GG L A + VEF +R D IREAT D
Sbjct: 413 LGESTGASVIF--GT-TGGVMEAALRTAYEWVTKDTLKDVEFIGVRGEDGIREATVNIND 469
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
+ ++ IA+G N + L+ ++ + Y IEIMACPSGC++GG Q + + +
Sbjct: 470 IEVKVAIASGLGNARKLLNDIRDGKSEYHMIEIMACPSGCVDGGGQPYIYGDTNILKKRT 529
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
AL E ++ KS EN ++ LY+ +LG +K +L+T Y
Sbjct: 530 EALYKEDSNKEIRKS--HENPYIKKLYEEYLGKPYGEKAHELLHTKYR 575
>gi|373120537|ref|ZP_09534593.1| hydrogenase, Fe-only [Lachnospiraceae bacterium 7_1_58FAA]
gi|371657337|gb|EHO22639.1| hydrogenase, Fe-only [Lachnospiraceae bacterium 7_1_58FAA]
Length = 584
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 205/411 (49%), Gaps = 34/411 (8%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+++ DC++C CI + + ++++ ++ +V+ A+ N+ K +V+ A
Sbjct: 187 DLAEVDCVSCGQCIVACPTGALSEK--DDTARVL-------AALNDPAKHVVVGPAPSIR 237
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
++LG F L V K+ +RLG D V DV A F+++E EFL R L+GGG
Sbjct: 238 VTLGECFGLPIGTNVEGKMVTALRRLGFDKVFDVDTAADFTILEEGTEFLSR-LNGGGTL 296
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PL TS PGWV Y E+ H ++ IS KSPQQ+ GSL+KT+ AE+ G+ P I+ V++
Sbjct: 297 PLITSCSPGWVRYLEQ-HAPDMIRNISSCKSPQQMFGSLVKTYYAEQAGMDPQDIFVVSI 355
Query: 243 MPCYDKKLEASRADFYNEEL--GYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
MPC KK E R + + L G VD +T EL ++ A + DG D
Sbjct: 356 MPCTAKKYEVLREE---QRLPNGCMPVDVSLTTRELGRMITQ--AGLLFEHLPDGAFDPM 410
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
+ SGG L + QL +E++ +R + ++EA++
Sbjct: 411 LGVSTGAAAIF---GASGGVMEAALRTVVEQLTGEGMAPLEYQEVRGMEGVKEASYELPG 467
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVA 412
T+R C+A+G N++ ++ ++ L YDF+E MACP GC+NGG Q +RN +
Sbjct: 468 KTVRVCVASGLHNVKRVLDGIRDGSLQYDFVEFMACPGGCINGGGQPIQHANVRNFTDIK 527
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ + AL + +S EN ++ +Y +LG K +L+ SY
Sbjct: 528 ALRAAALYKQDEGMTYRRSH--ENPVVQKVYADFLGEPGGHKAHALLHCSY 576
>gi|366986543|ref|XP_003673038.1| hypothetical protein NCAS_0A00870 [Naumovozyma castellii CBS 4309]
gi|342298901|emb|CCC66647.1| hypothetical protein NCAS_0A00870 [Naumovozyma castellii CBS 4309]
Length = 511
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 216/454 (47%), Gaps = 86/454 (18%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P+ C KP + K + + ++G Y E +L+KV
Sbjct: 35 MSTLLSEEDLNDFISPALACTKPTVVNK-------EPVNVNENGEY--EVTKEPTELEKV 85
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L+DCLACSGCITS+E +++++QS+ ++ ++ A TKT+ +S+A Q
Sbjct: 86 SITLSDCLACSGCITSSEEIMLSRQSYSVFLRDWEDSRA--------TKTLCVSVAPQCR 137
Query: 126 LSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLSGG--- 181
+S+ A F +S ++ L F+ G V+ + ++ + ++ G
Sbjct: 138 VSMAAHFQMSILELDLALVRLFREHFGARYVVGTQMGRNLTISRTNAKLMELKAQGKLNE 197
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ ++ CPG+V Y EK+ + P + VKSPQQ+ G+L +AE +YH+T
Sbjct: 198 KPMLSAICPGFVIYTEKTKPG-LAPLLLNVKSPQQITGALFLDAMAEG-----QEMYHLT 251
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN---ELATTTLQEEKDGILD 298
+MPC+DKKLEASRAD G +V CVIT EL +L +LA+ Q+EK L
Sbjct: 252 VMPCFDKKLEASRAD------GEHEVHCVITPKELVSMLEELELDLASFKSQDEK---LL 302
Query: 299 WP-----WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
W WD + +G Y + + + ++ PG + P +N ++ E
Sbjct: 303 WEASPAGWDPRVHWSSNEGSSSGGYAYQYVLETQSLH---PGSKMIT--LPGKNSNVVEY 357
Query: 354 TF--TCGDVTLRFCIANGFRNIQNLIQKLKRKRL-------------------------- 385
T G +GFRNIQN++++L +K +
Sbjct: 358 RLLDTEGHTLASAAELSGFRNIQNMVRQLDKKAVGQKRKVQVLRKRATSSMRNMNLDSKG 417
Query: 386 -------PY--DFIEIMACPSGCLNGGAQIRNEK 410
PY D+IE+ A P GC+NGG + +E+
Sbjct: 418 TGNGIADPYKTDYIEVNASPGGCINGGGLLNDEQ 451
>gi|146296869|ref|YP_001180640.1| hydrogenase, Fe-only [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410445|gb|ABP67449.1| hydrogenase, Fe-only [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 579
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 208/421 (49%), Gaps = 49/421 (11%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C C CI + + ++ +++ KA +++N K +V+ A
Sbjct: 185 SLNDVACTMCGQCIQACPVGALREKDSTDIV--------WKALADKN-KYVVVQTAPAVR 235
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F L +V K+ K LG D V D +++E E ++R +GG P
Sbjct: 236 VALGEEFGLPIGTRVTGKMVTALKMLGFDKVFDTDTGADLTIMEEGTELINRIKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L TS PGW+ + E EF L +S KSP ++ G+++KT+ A+K+G+ P++++ V++M
Sbjct: 296 LITSCSPGWIKFCEHYFPEF-LDNLSTCKSPHEMFGAILKTYYAQKMGIDPANMFVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA R + GY DVD V+T EL ++ K+ +D+
Sbjct: 355 PCTAKKFEAQREELAAS--GYPDVDAVLTTRELARMI------------KEAGIDFVNLP 400
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI---------R 351
N + + TG+G G V+ A+R + ++ KPL N +I R
Sbjct: 401 DNHFDDPMGDATGAGVIFGTTGGVMEAALRTV----YEILTGKPLENVEITQVRGLEGIR 456
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEK 410
EA G + ++ +A+G N + L++ +K Y FIEIMACP GC+ GG Q I K
Sbjct: 457 EAEIDVGTMKIKAAVAHGLANAKKLLEMVKNGEKEYHFIEIMACPGGCIMGGGQPIVPAK 516
Query: 411 VASPKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
V + A + + D +S P EN T++ LY+ +LG +++K H+L+T Y
Sbjct: 517 VREKIDVAKLRASAIYDEDRSLPIRKSHENPTIKKLYEEFLGHPNSEKAHHILHTHYKRR 576
Query: 467 P 467
P
Sbjct: 577 P 577
>gi|148379807|ref|YP_001254348.1| [Fe] hydrogenase [Clostridium botulinum A str. ATCC 3502]
gi|153932525|ref|YP_001384105.1| [Fe] hydrogenase [Clostridium botulinum A str. ATCC 19397]
gi|153935257|ref|YP_001387645.1| [Fe] hydrogenase [Clostridium botulinum A str. Hall]
gi|148289291|emb|CAL83387.1| putative catalytic subunit of iron-only hydrogenase [Clostridium
botulinum A str. ATCC 3502]
gi|152928569|gb|ABS34069.1| iron hydrogenase 1 [Clostridium botulinum A str. ATCC 19397]
gi|152931171|gb|ABS36670.1| iron hydrogenase 1 [Clostridium botulinum A str. Hall]
Length = 577
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 201/408 (49%), Gaps = 33/408 (8%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA--SSNENTKTIVLSLAIQP 124
I T+C C C++ + +T+ NN K + ++ K +++ A
Sbjct: 191 IKNTNCTFCGQCVSVCPTGALTEV-----------NNTSKVWDALSQKDKIVIVQTAPAI 239
Query: 125 VLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F L V K+ ++LG V D A +++E +EF+ R GG
Sbjct: 240 RAALGEEFGLEPGTTVTGKMVAALRQLGFSKVFDTDFAADLTIMEEASEFIHRLEHGGTL 299
Query: 183 PLFTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS CPGW+ + E + + + +P S KSPQQ+ G++ K++LAEK+ V P I V+
Sbjct: 300 PMLTSCCPGWIKFFEHNFNDLMDIP--SSCKSPQQMFGAIAKSYLAEKMKVDPKDIIVVS 357
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA R + G DVD VI+ EL ++++ + +LQEE+ D P
Sbjct: 358 VMPCLAKKYEAKREEMKRN--GIPDVDIVISTRELAKMIVEAGIDFNSLQEEE---FDNP 412
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
E ++ GT +GG L A + G VEF +R D IREAT D
Sbjct: 413 LGESTGASVIF--GT-TGGVMEAALRTAYEWVTKGTLKDVEFIEVRGEDGIREATVNIKD 469
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
++ IA+G N + L+ ++ + Y IEIMACPSGC++GG Q + + +
Sbjct: 470 TEVKVAIASGLGNARKLLNDIRNGKSKYHMIEIMACPSGCVDGGGQPYIYGDTNILKKRT 529
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
AL E ++ KS EN ++ LY+ +LG +K +L+T Y
Sbjct: 530 EALYKEDSNKEIRKS--HENPYIKKLYEEYLGKPYGEKAHELLHTKYR 575
>gi|302871900|ref|YP_003840536.1| hydrogenase, Fe-only [Caldicellulosiruptor obsidiansis OB47]
gi|302574759|gb|ADL42550.1| hydrogenase, Fe-only [Caldicellulosiruptor obsidiansis OB47]
Length = 579
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 204/415 (49%), Gaps = 37/415 (8%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C C CI + + ++ +++ KA +++N K +V+ A
Sbjct: 185 SLNDVACTMCGQCIQACPVGALREKDSTDIV--------WKALADKN-KYVVVQTAPAVR 235
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F L +V K+ K LG D V D A +++E E ++R +GG P
Sbjct: 236 VALGEEFGLPIGTRVTGKMVTALKMLGFDKVFDTDTAADLTIMEEGTELINRIKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L TS PGW+ + E EF L +S KSP ++ G+++KT+ A+K+G+ P++++ V++M
Sbjct: 296 LITSCSPGWIKFCEHYFPEF-LDNLSTCKSPHEMFGAILKTYFAQKMGIDPANMFVVSVM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA R + GY DVD V+T EL ++ +E ++ P D
Sbjct: 355 PCTAKKFEAQREELAAS--GYPDVDAVLTTRELARMI---------KEAGIDFVNLP-DS 402
Query: 304 HNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTC 357
H M G G +GG L L VE +R + IREA
Sbjct: 403 HFDDPMGDATGAGVIFGTTGGVMEAALRTVYEVLTGKTLENVEITQVRGFEGIREAEIDV 462
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKE 416
G + ++ +A+G N + L++ +K Y FIEIMACP GC+ GG Q I + KV +
Sbjct: 463 GSMKIKAAVAHGLSNAKKLLEMVKNGEKEYHFIEIMACPGGCIMGGGQPIVHAKVKEKVD 522
Query: 417 TALELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
A + + D +S + EN T++ LY+ +LG +++K H+L+T Y P
Sbjct: 523 VAKLRASAIYDEDRSLVIRKSHENPTVKRLYEEFLGHPNSEKAHHILHTHYKKRP 577
>gi|332981829|ref|YP_004463270.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Mahella
australiensis 50-1 BON]
gi|332699507|gb|AEE96448.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Mahella
australiensis 50-1 BON]
Length = 582
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 203/431 (47%), Gaps = 41/431 (9%)
Query: 49 GAYIQETNGREEKLKKVEISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKA 107
GA + N E K+ I+ C+ C CI + L + E V + + H
Sbjct: 170 GATERGFNTMVEPPFKMSINQVPCINCGQCIEACPVGALREKDDTERVWTALADPELH-- 227
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSL 166
+V+ A +LG +F + +V K+ +RLG D V D A ++
Sbjct: 228 --------VVVQTAPAVRAALGEEFGMPIGTRVTGKMAAALRRLGFDKVFDTDFAADLTI 279
Query: 167 VELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
+E E LDR +GG PL TS PGWV Y E + EF L +S KSP ++MG+++K++
Sbjct: 280 MEEGTELLDRLKNGGKLPLITSCSPGWVKYCEHYYPEF-LDNLSSCKSPHEMMGAVLKSY 338
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA 285
A+K+ + PS I+ V++MPC KK EA R + G+ DVD VIT EL ++
Sbjct: 339 YAQKMNIDPSKIFVVSVMPCTAKKFEAQRPELAAN--GHPDVDVVITTRELARMI----- 391
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVV 340
+E L P DE + + G G +GG L L E +
Sbjct: 392 ----KEAGINFLALP-DESFDDPLGISTGAGVIFGVTGGVMEAALRTVAEILTGEELENI 446
Query: 341 EFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
EF +R + IR A+ G VT++ +ANG N L+ ++K + YDFIEIM CP GC
Sbjct: 447 EFGVVRGLEGIRTASIDAGGVTIKAAVANGTANAAALLDRIKSGQEHYDFIEIMGCPGGC 506
Query: 400 LNGG------AQIR-NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKST 452
+NGG AQ R + + + + AL E D+ + EN ++ +Y +LG ++
Sbjct: 507 INGGGQPILTAQQRWDIDIKAERAKALYQEDR--DMPIRKSHENPQIKAIYNEFLGKPNS 564
Query: 453 DKGKHMLNTSY 463
+L+T Y
Sbjct: 565 HTAHELLHTHY 575
>gi|225572039|ref|ZP_03780903.1| hypothetical protein RUMHYD_00333 [Blautia hydrogenotrophica DSM
10507]
gi|225040474|gb|EEG50720.1| hydrogenase, Fe-only [Blautia hydrogenotrophica DSM 10507]
Length = 581
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 199/406 (49%), Gaps = 33/406 (8%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + + ++ + ++V+ I + K +V+ A +L
Sbjct: 190 TSCVSCGQCIAVCPTGALQEKDYTDQVLAAIADPE----------KYVVVQTAPSVRAAL 239
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F V K+ +R+G D V D + +++E +EFL+R +GG PL T
Sbjct: 240 GEEFGYPIGTDVEGKMAAALRRMGFDKVFDTDFSADLTIMEEAHEFLNRVQNGGVLPLIT 299
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV Y E + +L ++S KSPQQ+ G++ KT+ AEK+G+ P I V++MPC
Sbjct: 300 SCSPGWVKYCEHYFPD-LLDHLSSCKSPQQMFGAVTKTYFAEKMGLDPEKIVCVSVMPCT 358
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWPWDEHN 305
KK E R D G DVD IT EL L+ + L EE D P E
Sbjct: 359 AKKFEIGRPD--QSAAGVPDVDIAITTRELARLIKRCGINFVNLPEE---TFDDPLGEST 413
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRF 364
++ +GG L A+ L ++F+ +R + I+EA++ + ++
Sbjct: 414 GAGVIF---GATGGVMEAALRTAVETLTGETLGSLDFEEVRGTEGIKEASYLVNGLEVKV 470
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKET 417
+A+G N + +++K++R Y FIEIMACP GC+NGG Q +RN + + + +
Sbjct: 471 AVASGLANAREILEKIRRGEADYHFIEIMACPGGCVNGGGQPQVPAEVRNFQDIRALRAK 530
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L L KS EN +++ LY +LG + K +L+TSY
Sbjct: 531 VLYQNDTQKALRKS--HENPSIQKLYAEYLGEPGSHKAHKILHTSY 574
>gi|45185025|ref|NP_982742.1| ABL205Cp [Ashbya gossypii ATCC 10895]
gi|74695629|sp|Q75E78.1|NAR1_ASHGO RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|44980661|gb|AAS50566.1| ABL205Cp [Ashbya gossypii ATCC 10895]
Length = 451
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 201/433 (46%), Gaps = 84/433 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S L +DL+DFIG C+KP RT + D+G E ++ KV
Sbjct: 1 MSAKLSESDLNDFIGAQVACVKPT--------RT---LHTADEGDEALEVGKEPQEATKV 49
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
ISL DCLAC+GCITS+E +L+++QSH ++ R + K + +S+A Q
Sbjct: 50 SISLQDCLACAGCITSSEEILLSRQSHGVFLEAWR---------SLAPKALAVSVAPQSR 100
Query: 126 LSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG-GGP 183
LSL F LS ++ L G G V+ + S+ + ++R G GP
Sbjct: 101 LSLAQHFGLSVAELDQCLSGVLGSYFGAKYVVGTQLGRELSVQQTNARLVERKQQGVQGP 160
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L S CPG+V YAEK+ + PY+ VKSPQQ+ G+L+ H A+ +IYH++LM
Sbjct: 161 LLCSVCPGFVLYAEKTKPGLV-PYMLDVKSPQQITGALL--HAADP------NIYHLSLM 211
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL----------ATTTLQEEK 293
PC+DKKLEA+R D R+VDCV+T E LL +EL A Q
Sbjct: 212 PCFDKKLEAAREDC------AREVDCVLTPREFVALL-DELQLDLHSFAGAAVPIAQLTP 264
Query: 294 DGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREA 353
G WD P + S G +++L PG + + + RN D+ E
Sbjct: 265 PG-----WD---PRVSWCSSAGSSSGGYAYQYILHMQRLHPGST--IATQAGRNADLLEH 314
Query: 354 TFTCGDVTLRFCIAN--GFRNIQNLIQKL-----------KRKRLPY------------- 387
L GFRNIQNL++KL R+RLP
Sbjct: 315 RLLAPSGVLLASAGELYGFRNIQNLVRKLLSPATKRSAKVVRRRLPQASPAPPATDPCNA 374
Query: 388 DFIEIMACPSGCL 400
DFIE+MACPSGC+
Sbjct: 375 DFIEVMACPSGCI 387
>gi|385809115|ref|YP_005845511.1| hydrogenase subunit HydA [Ignavibacterium album JCM 16511]
gi|383801163|gb|AFH48243.1| Hydrogenase subunit HydA [Ignavibacterium album JCM 16511]
Length = 575
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 204/406 (50%), Gaps = 22/406 (5%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++++DC+ C CI + + ++S +EV + + K + +A
Sbjct: 184 LNVSDCILCGQCILVCPTAALREKSSVKEVASALYDRK----------KYCIAQVAPAVR 233
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
S+G ++ + V L +RLG V D A +++E +E ++R +GG P
Sbjct: 234 ASIGEEYNMPLGTDVTGLLVTGLRRLGFKKVFDTNFAADLTIMEEASELINRIQNGGSLP 293
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CPGWV YAE ++ E IL +IS KSP ++ G+++KT+ A+K+G+ P I+ V++M
Sbjct: 294 MFTSCCPGWVKYAEMNNPE-ILDHISTCKSPHEMEGAVLKTYYAKKMGIDPKDIFVVSIM 352
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK E++R + E L DVD V+T EL ++A + + D P E
Sbjct: 353 PCTVKKYESARPELKEEVL--PDVDAVLTTRELVRFF--KIAGIDFNDLPESEFDNPLGE 408
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTL 362
+ GT SGG L A +L E +EF+ +R + ++EAT + +
Sbjct: 409 STGAAAIF--GT-SGGVMEAALRTAYWKLTGKELDKLEFEEIRGMEGVKEATVNINGMDI 465
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELE 422
+ NG N++ +++++ + + FIE+MACP GC+NGG Q ++K + L
Sbjct: 466 NIAVVNGIGNVKQIVEEVAAGKSKHHFIEVMACPGGCINGGGQPIHQKPEKVMKRVKVLY 525
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
I + EN +++ LY+ + G ++ K +L+T Y + K
Sbjct: 526 QIDENAKHRRSHENESVKTLYREFFGEPNSHKAHEILHTEYFDKKK 571
>gi|71748460|ref|XP_823285.1| iron-containing hydrogenase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832953|gb|EAN78457.1| iron-containing hydrogenase, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 475
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 209/446 (46%), Gaps = 52/446 (11%)
Query: 1 MASSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE 60
M+++ FS L L +D +I PS+ CI P ++ + D + + G E
Sbjct: 1 MSANNFSASLMLAGMD-YIAPSEACILPTKLQGGT-----------SDDSVKRHGAGNE- 47
Query: 61 KLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSL 120
V+I+L DCLACSGC+T+AE++LIT QS EE++ K + + T+ +++
Sbjct: 48 ---AVKITLQDCLACSGCVTTAETILITSQSREELL---------KDRALDPTRPFFVTI 95
Query: 121 AIQPVLSLGAKFALSHEQVVAKLCGFFKR-LGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+ Q S+ A ++ + GFF+ L V D+ A S+ + E+ R
Sbjct: 96 SDQSAASIAAFLKTDVQRAFHIVSGFFRAVLNARYVSDLHWALRISVEKTAEEYCRRVRC 155
Query: 180 GGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
PL S CPGWVCY EK G ILP + V SPQ + G KT + + +
Sbjct: 156 ERERLPLIVSACPGWVCYCEK-QGAAILPLLCPVMSPQGIAGCYSKTLIPQ--------M 206
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQE--EKDG 295
HV++ PC+D+KLEA+R + G R D V++ EL + + Q + D
Sbjct: 207 CHVSVQPCFDRKLEAARDG--SSVSGERYTDFVLSTQELLDWMLEVDPSLPWQAPLDSDL 264
Query: 296 ILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE-SPV---VEFKPLRNPDIR 351
P R GSGGY + A +L E +P E K N +
Sbjct: 265 EPLPILPPEEPKRSFAATMEGSGGYHRYAMHRAACELHGLELAPRDIHYEMKRNANHHLT 324
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKR---LPYDFIEIMACPSGCLNGGAQIRN 408
+ G+V FC+A GF+ IQN ++ +KRK Y FIE+MACP GCLNGG Q RN
Sbjct: 325 TSPSNPGEV---FCVAYGFQQIQNTVRGIKRKLASVASYTFIELMACPEGCLNGGGQARN 381
Query: 409 EKVASPKE-TALELETILCDLAKSEP 433
S E TA + ++ S+P
Sbjct: 382 GTTQSHVETTAAAKSAFISYISGSQP 407
>gi|254478298|ref|ZP_05091678.1| putative hydrogenase, Fe-only subfamily [Carboxydibrachium
pacificum DSM 12653]
gi|214035763|gb|EEB76457.1| putative hydrogenase, Fe-only subfamily [Carboxydibrachium
pacificum DSM 12653]
Length = 581
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 206/411 (50%), Gaps = 39/411 (9%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI I ++ H K + E A ++ K +V A
Sbjct: 185 SLKDSPCISCGQCIMVCPVGAIYEKDH---TKRVYEALA------DDKKYVVAQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + +V K+ +R+G D V D A +++E +E L+R GG P
Sbjct: 236 VALGEEFGMPVGTIVTGKMAAALRRMGFDAVFDTNFAADLTIMEEGSELLERIKHGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ + EK + EFI +S KSP +MG+L+K++ AEK G+ P I+ V++M
Sbjct: 296 MITSCSPGWIAFCEKYYPEFI-DNLSTCKSPHMMMGALVKSYYAEKKGLDPKDIFVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KKLE R + G +DVD V+T EL ++ E+ + + D +DE
Sbjct: 355 PCTAKKLEIEREEMIRN--GMKDVDAVLTTRELARMI-KEMGIDFVN-----LKDEEFDE 406
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATF 355
P M TG+G G V+ A+R ++ G ++F+ +R + +REAT
Sbjct: 407 --PLGM----STGAGAIFGATGGVMEAALRTVAEIVEGRDIGKIDFEEVRGLEGVREATI 460
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI---RNEKVA 412
T + ++ IANG N + L+ K+K + Y FIE+M CP GC+ GG Q NE
Sbjct: 461 TIDGMDIKIAIANGTGNAKKLLDKVKAGEVEYHFIEVMGCPGGCIMGGGQPIHNPNEMEE 520
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
K A + I +L + EN ++ LY+ +LG ++K +L+T Y
Sbjct: 521 VKKLRAKAIYEIDKNLPIRKSHENPAIKRLYEEFLGHPLSEKSHELLHTHY 571
>gi|323702073|ref|ZP_08113741.1| hydrogenase, Fe-only [Desulfotomaculum nigrificans DSM 574]
gi|323532955|gb|EGB22826.1| hydrogenase, Fe-only [Desulfotomaculum nigrificans DSM 574]
Length = 657
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 194/407 (47%), Gaps = 26/407 (6%)
Query: 72 CLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C CI + L + S EV IR+ KT+V +A P +LG
Sbjct: 189 CINCGQCIAVCPTGALTSNSSVNEVWAAIRDPR----------KTVVCQIAPAPRTALGE 238
Query: 131 KFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSEC 189
+F L V K+ +++G D V D A + +E NEFLDR G P+FTS C
Sbjct: 239 EFGLGSVDVTGKIVSALRKIGFDRVFDTVFAADMTTIEESNEFLDRLAKGEKLPIFTSCC 298
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGWV YAE+ H E +L IS +SPQQ+ GS++K ++LG+ P ++ V++MPC KK
Sbjct: 299 PGWVKYAEQFHPE-LLDNISTCRSPQQMFGSVLKKKYCQELGIKPEDMFVVSIMPCTAKK 357
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRM 309
EA R +F G DVD V+T VE + A ++ + D P + +
Sbjct: 358 YEAKRPEFTTA--GSYDVDAVLTTVEAAQMFRE--AGIIFEQLPESDFDEPMQQATGSGV 413
Query: 310 LLVNGTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRN-PDIREATFTCGDVTLRFCIA 367
L +GG +V+ + +L E + +EF +R D + AT GD L +
Sbjct: 414 LF---GATGGVMESVVRYVTGKLLKTEGRIDIEF--VRGMADTKIATLNVGDNKLTLAVV 468
Query: 368 NGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCD 427
NG + LI+K+K L +E+MACP GC+ GG Q A+ A E+ I
Sbjct: 469 NGLAAAEALIEKIKSGELEVHAVEVMACPGGCVGGGGQPFQNDSAARSARAKEIYNIDTR 528
Query: 428 LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
+ + ++N L +++ + GG H L+T YH P+ I N
Sbjct: 529 MVLHKAQDNQDLNKIFEKYWGGCCNHDTHHDLHTHYH--PRKRITGN 573
>gi|333923422|ref|YP_004497002.1| hydrogenase, Fe-only [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333748983|gb|AEF94090.1| hydrogenase, Fe-only [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 657
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 194/407 (47%), Gaps = 26/407 (6%)
Query: 72 CLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C CI + L + S EV IR+ KT+V +A P +LG
Sbjct: 189 CINCGQCIAVCPTGALTSNSSVSEVWAAIRDPR----------KTVVCQIAPAPRTALGE 238
Query: 131 KFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSEC 189
+F L V K+ +++G D V D A + +E NEFLDR G P+FTS C
Sbjct: 239 EFGLGSVDVTGKIVSALRKIGFDRVFDTVFAADMTTIEESNEFLDRLAKGEKLPIFTSCC 298
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGWV YAE+ H E +L IS +SPQQ+ GS++K ++LG+ P ++ V++MPC KK
Sbjct: 299 PGWVKYAEQFHPE-LLDNISTCRSPQQMFGSVLKKKYCQELGIKPEDMFVVSIMPCTAKK 357
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRM 309
EA R +F G DVD V+T VE + A ++ + D P + +
Sbjct: 358 YEAKRPEFTTA--GSYDVDAVLTTVEAAQMFRE--AGIIFEQLPESDFDEPMQQATGSGV 413
Query: 310 LLVNGTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRN-PDIREATFTCGDVTLRFCIA 367
L +GG +V+ + +L E + +EF +R D + AT GD L +
Sbjct: 414 LF---GATGGVMESVVRYVTGKLLKTEGRIDIEF--VRGMADTKIATLNVGDNKLTLAVV 468
Query: 368 NGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCD 427
NG + LI+K+K L +E+MACP GC+ GG Q A+ A E+ I
Sbjct: 469 NGLAAAEALIEKIKSGELEVHAVEVMACPGGCVGGGGQPFQNDSAARSARAKEIYNIDTR 528
Query: 428 LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
+ + ++N L +++ + GG H L+T YH P+ I N
Sbjct: 529 MVLHKAQDNQDLNKIFEKYWGGCCNHDTHHDLHTHYH--PRKRITGN 573
>gi|20807375|ref|NP_622546.1| NADH dehydrogenase/NADH:ubiquinone oxidoreductase subunit G
[Thermoanaerobacter tengcongensis MB4]
gi|20515894|gb|AAM24150.1| NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit
(chain G) [Thermoanaerobacter tengcongensis MB4]
Length = 581
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 206/411 (50%), Gaps = 39/411 (9%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C++C CI I ++ H K + E A ++ K +V A
Sbjct: 185 SLKDSPCISCGQCIMVCPVGAIYEKDH---TKRVYEALA------DDKKYVVAQTAPAVR 235
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + +V K+ +R+G D V D A +++E +E L+R GG P
Sbjct: 236 VALGEEFGMPVGTIVTGKMAAALRRMGFDAVFDTNFAADLTIMEEGSELLERIKHGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ + EK + EFI +S KSP +MG+L+K++ AEK G+ P I+ V++M
Sbjct: 296 MITSCSPGWIAFCEKYYPEFI-DNLSTCKSPHMMMGALVKSYYAEKKGLDPKDIFVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KKLE R + G +DVD V+T EL ++ E+ + + D +DE
Sbjct: 355 PCTAKKLEIEREEMIRN--GMKDVDAVLTTRELARMI-KEMGIDFVN-----LKDEEFDE 406
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATF 355
P M TG+G G V+ A+R ++ G ++F+ +R + +REAT
Sbjct: 407 --PLGM----STGAGAIFGATGGVMEAALRTVAEIVEGRDIGKIDFEEVRGLEGVREATI 460
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI---RNEKVA 412
T + ++ IANG N + L+ K+K + Y FIE+M CP GC+ GG Q NE
Sbjct: 461 TIDGMDIKIAIANGTGNAKKLLDKVKAGEVEYHFIEVMGCPGGCIMGGGQPIHNPNEMEE 520
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
K A + I +L + EN ++ LY+ +LG ++K +L+T Y
Sbjct: 521 VKKLRAKAIYEIDKNLPIRKSHENPAIKRLYEEFLGYPLSEKSHELLHTHY 571
>gi|187779552|ref|ZP_02996025.1| hypothetical protein CLOSPO_03148 [Clostridium sporogenes ATCC
15579]
gi|187773177|gb|EDU36979.1| hydrogenase, Fe-only [Clostridium sporogenes ATCC 15579]
Length = 577
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 202/408 (49%), Gaps = 33/408 (8%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA--SSNENTKTIVLSLAIQP 124
I T+C C C++ + +T+ NN K + ++ K +++ A
Sbjct: 191 IKNTNCTFCGQCVSVCPTGALTEV-----------NNTSKVWDALSQKDKVVIVQTAPAI 239
Query: 125 VLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F L V K+ ++LG V D A +++E +EF+ R GG
Sbjct: 240 RAALGEEFGLEPGTTVTGKMVAALRQLGFSKVFDTDFAADLTIMEEASEFIHRLEHGGTL 299
Query: 183 PLFTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS CPGW+ + E + + + +P S KSPQQ+ G++ K++LAEK+ V P I V+
Sbjct: 300 PMLTSCCPGWIKFFEHNFNDLMDIP--SSCKSPQQMFGAIAKSYLAEKMKVDPKDIIVVS 357
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA R + G DVD VI+ EL ++++ + +LQEE+ D P
Sbjct: 358 VMPCLAKKYEAKREEMKRN--GIPDVDIVISTRELAKMIVEAGIDFNSLQEEE---FDNP 412
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
E ++ GT +GG L A + G VEF +R + IREAT D
Sbjct: 413 LGESTGASVIF--GT-TGGVMEAALRTAYEWVTKGTLKDVEFIEVRGEEGIREATVNIKD 469
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
+ ++ IA+G N + L+ ++ + Y IEIMACPSGC++GG Q + + +
Sbjct: 470 IEVKVAIASGLGNARKLLNDIRNGKSKYHMIEIMACPSGCVDGGGQPYIYGDTNILKKRT 529
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
AL E ++ KS EN ++ LY+ +LG +K +L+T Y
Sbjct: 530 EALYKEDSNKEIRKS--HENLYIKKLYEEYLGKPYGEKAHELLHTKYR 575
>gi|440296023|gb|ELP88869.1| hypothetical protein EIN_475610 [Entamoeba invadens IP1]
Length = 410
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/426 (33%), Positives = 200/426 (46%), Gaps = 68/426 (15%)
Query: 10 LQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISL 69
LQL +DD+I PSQ C+ P+ E + + +KI I+ G QE +L +V + L
Sbjct: 22 LQLQGIDDYIAPSQVCVMPLT-EDKAPQKKQSKIMIE--GTTPQENTT---QLTRVTVRL 75
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
DCLACSGCITSAES+LI +Q ++ ++ + T+ IV S A + + SL
Sbjct: 76 EDCLACSGCITSAESILIEEQGFKQFKNTLK--------TLPTTRRIVCSYADEVIASLS 127
Query: 130 AKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPLFTSEC 189
A VVA+L KR GV V+D+ A SL+ + E+ + T+ C
Sbjct: 128 AYHNQPFWMVVARLEKAMKREGVSEVVDLTDAMDVSLLSMYEEY-KQHQKEKKVYLTTTC 186
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGW+CYAEK G+ I PY+ + S + G L+K S +YHV++ CYDKK
Sbjct: 187 PGWLCYAEKMQGDTIFPYLGKTASAMTIKGILLKA---------TSDVYHVSVQMCYDKK 237
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRM 309
LEA++ E G + VDCV+T E+ D I++W
Sbjct: 238 LEATK-----EINGLKSVDCVLTTNEI-----------------DDIINWEEK------- 268
Query: 310 LLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRFCIANG 369
+ G G L+ + + E F LRN D E + I G
Sbjct: 269 --IEKVGEGIREFGYLNEPGKYIALREGLPDTFTTLRNKDFFENS--------HVAIVYG 318
Query: 370 FRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLA 429
FRNIQN+++ K K +DFIE+ ACP GCL GG QI+ PKE +E + +
Sbjct: 319 FRNIQNVVRMTKTKS-KFDFIEVEACPGGCLCGGGQIK----CLPKERTERVEKMRSVMR 373
Query: 430 KSEPRE 435
E E
Sbjct: 374 SREVEE 379
>gi|390935224|ref|YP_006392729.1| hydrogenase, Fe-only [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570725|gb|AFK87130.1| hydrogenase, Fe-only [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 581
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 201/414 (48%), Gaps = 55/414 (13%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C++C CI + I ++ H +++ + A +E K +V+ A ++LG +
Sbjct: 191 CISCGQCIEACPVGAIYEKDHTKIV--------YDALLDEK-KYVVVQTAPAVRVALGEE 241
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSEC 189
F + + +V K+ KRLG D V D A +++E NE L R GG P+ TS
Sbjct: 242 FGMPYGSIVTGKMVSALKRLGFDKVFDTDFAADLTIIEEGNELLKRLNEGGKLPMITSCS 301
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGW+ Y E+ + EFI +S KSP +MG++IK++ AEK G+ P I+ V++MPC KK
Sbjct: 302 PGWINYCERYYPEFI-DNLSTCKSPHMMMGAIIKSYFAEKEGIDPKDIFVVSIMPCTAKK 360
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH-NPHR 308
E R + G +DVD V+T ELA Q D ++ P E+ NP
Sbjct: 361 YEIDRPQMIVD--GMKDVDAVLTT--------RELARMIKQSGID-FVNLPDSEYDNP-- 407
Query: 309 MLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IREATFT 356
L +G+G G V+ A+R + + +VE K + N + I+EA
Sbjct: 408 --LGESSGAGVIFGATGGVMEAALRTV----ADIVEGKDIENFEYEEVRGLEGIKEAKID 461
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G ++ +ANG N + L+ K+K Y FIE+M CP GC+ GG Q + +P E
Sbjct: 462 IGGKEIKIAVANGTGNAKKLLDKIKNGEAEYHFIEVMGCPGGCIMGGGQ----PIHNPNE 517
Query: 417 TALELETIL-------CDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L ++ L DL + +N + LY+ +L +K H+L+T+Y
Sbjct: 518 KDLVRKSRLKAIYEADKDLPIRKSHKNPMITKLYEEFLISPLGEKSHHLLHTTY 571
>gi|153940304|ref|YP_001391107.1| [Fe] hydrogenase [Clostridium botulinum F str. Langeland]
gi|384462136|ref|YP_005674731.1| iron hydrogenase 1 [Clostridium botulinum F str. 230613]
gi|152936200|gb|ABS41698.1| iron hydrogenase 1 [Clostridium botulinum F str. Langeland]
gi|295319153|gb|ADF99530.1| iron hydrogenase 1 [Clostridium botulinum F str. 230613]
Length = 577
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 201/408 (49%), Gaps = 33/408 (8%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA--SSNENTKTIVLSLAIQP 124
I T+C C C++ + +T+ NN K + ++ K +++ A
Sbjct: 191 IKNTNCTFCGQCVSVCPTGALTEV-----------NNTSKVWDALSQKDKVVIVQTAPAI 239
Query: 125 VLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F L V K+ ++LG V D A +++E +EF+ R GG
Sbjct: 240 RAALGEEFGLEPGTAVTGKMVAALRQLGFSKVFDTDFAADLTIMEEASEFIHRLEHGGTL 299
Query: 183 PLFTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS CPGW+ + E + + + +P S KSPQQ+ G++ K++LAEK+ V P I V+
Sbjct: 300 PMLTSCCPGWIKFFEHNFNDLMDIP--SSCKSPQQMFGAIAKSYLAEKMKVDPKDIIVVS 357
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA R + G DVD VI+ EL ++++ + +LQEE+ D P
Sbjct: 358 VMPCLAKKYEAKREEMKRN--GIPDVDIVISTRELAKMIVEAGIDFNSLQEEE---FDNP 412
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
+ ++ GT +GG L A + G VEF +R D IREAT D
Sbjct: 413 LGQSTGASVIF--GT-TGGVMEAALRTAYEWVTKGTLKDVEFIEVRGEDGIREATVNIKD 469
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
++ IA+G N + L+ ++ + Y IEIMACPSGC++GG Q + + +
Sbjct: 470 TEVKVAIASGLGNARKLLNDIRNGKSKYHMIEIMACPSGCVDGGGQPYIYGDTNILKKRT 529
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
AL E ++ KS EN ++ LY+ +LG +K +L+T Y
Sbjct: 530 EALYKEDSNKEIRKS--HENPYIKKLYEEYLGKPYGEKAHELLHTKYR 575
>gi|134299511|ref|YP_001113007.1| hydrogenase [Desulfotomaculum reducens MI-1]
gi|134052211|gb|ABO50182.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Desulfotomaculum reducens MI-1]
Length = 659
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 202/413 (48%), Gaps = 27/413 (6%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSH--EEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+S + C+ C CI + +T S +E+ IR+ KT+V +A P
Sbjct: 184 LSESACINCGQCIAVCPTGALTSNSSSIQEIWAAIRDPK----------KTVVCQIAPAP 233
Query: 125 VLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+LG +F L V K+ +++G D V D + +E NEFL R + G P
Sbjct: 234 RAALGEEFGLGSVDVTKKVVTALRKIGFDKVFDTVFTADMTTIEESNEFLSRLVKGENLP 293
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
LFTS CPGWV YAE+ H E +L +S +SPQQ+ G+++K A++LG+ P ++ V++M
Sbjct: 294 LFTSCCPGWVKYAEEFHPE-LLSNLSSCRSPQQMFGAVLKKKYAKELGIAPQDMFVVSVM 352
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWD 302
PC KK EA R +F E G DVD V+T VE ++ + TL+E + D P
Sbjct: 353 PCTAKKYEAKRPEFTTE--GAYDVDAVLTTVEAARMIKEAGIIFNTLEESE---FDQPMQ 407
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPDIREATFTCGDVT 361
+ +L GT +GG +V+ + +L E V VEF D + A+ GD
Sbjct: 408 QATGSGVLF--GT-TGGVMESVIRYVAGKLLNAEGRVDVEFTRGME-DTKIASINVGDNK 463
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
L + NG + LIQK++ L +E+MACP GC+ GG Q K A E+
Sbjct: 464 LNLAVVNGLSATEALIQKIQSGELDVQAVEVMACPGGCVGGGGQPFQNDNEHRKARASEI 523
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
I L + ++N L +++ + GG H L+T Y+ PK +A N
Sbjct: 524 YGIDAKLELHKAQDNEDLNKIFEKYWGGCCNHDTHHDLHTHYN--PKRRVAGN 574
>gi|169247661|gb|ACA51661.1| HydA [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 584
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 201/414 (48%), Gaps = 55/414 (13%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C++C CI + I ++ H +++ + A +E K +V+ A ++LG +
Sbjct: 194 CISCGQCIEACPVGAIYEKDHTKIV--------YDALLDEK-KYVVVQTAPAVRVALGEE 244
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSEC 189
F + + +V K+ KRLG D V D A +++E NE L R GG P+ TS
Sbjct: 245 FGMPYGSIVTGKMVSALKRLGFDKVFDTDFAADLTIIEEGNELLKRLNEGGKLPMITSCS 304
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGW+ Y E+ + EFI +S KSP +MG++IK++ AEK G+ P I+ V++MPC KK
Sbjct: 305 PGWINYCERYYPEFI-DNLSTCKSPHMMMGAIIKSYFAEKEGIDPKDIFVVSIMPCTAKK 363
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH-NPHR 308
E R + G +DVD V+T ELA Q D ++ P E+ NP
Sbjct: 364 YEIDRPQMIVD--GMKDVDAVLTT--------RELARMIKQSGID-FVNLPDSEYDNP-- 410
Query: 309 MLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IREATFT 356
L +G+G G V+ A+R + + +VE K + N + I+EA
Sbjct: 411 --LGESSGAGVIFGATGGVMEAALRTV----ADIVEGKDIENFEYEEVRGLEGIKEAKID 464
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G ++ +ANG N + L+ K+K Y FIE+M CP GC+ GG Q + +P E
Sbjct: 465 IGGKEIKIAVANGTGNAKKLLDKIKNGEAEYHFIEVMGCPGGCIMGGGQ----PIHNPNE 520
Query: 417 TALELETIL-------CDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L ++ L DL + +N + LY+ +L +K H+L+T+Y
Sbjct: 521 KDLVRKSRLKAIYEADKDLPIRKSHKNPMITKLYEEFLISPLGEKSHHLLHTTY 574
>gi|291557757|emb|CBL34874.1| hydrogenases, Fe-only [Eubacterium siraeum V10Sc8a]
Length = 583
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 204/417 (48%), Gaps = 44/417 (10%)
Query: 65 VEISLTDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
++++ T C++C CIT+ + L + ++V + + K +V+ A
Sbjct: 186 LDLAETACVSCGQCITACPTGALAEKDDTDKVWDALADPE----------KVVVVQTAPA 235
Query: 124 PVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
SLG F V K+ +RLG + V D +++E +EFLDR +GG
Sbjct: 236 VRASLGEAFGYPMGTPVEGKMVAALRRLGFNAVFDTNFGADLTIMEESHEFLDRVTNGGV 295
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS PGW+ + E EFI P +S KSPQQ+ G++ KT+ A+K+G+ P +I V+
Sbjct: 296 LPMITSCSPGWIRFCEAYFPEFI-PNLSSCKSPQQMNGAITKTYWAKKMGIDPKNIVSVS 354
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK E R D G DVD IT EL V + N A ++ D + D P
Sbjct: 355 VMPCTAKKFEIGRED--QSAAGVPDVDISITTREL-VKMINR-AGLRFRDLPDEVADSP- 409
Query: 302 DEHNPHRMLLVNGTG-------SGGYAHNVLSHAIRQLC--PGESPVVEFKPLRNPD-IR 351
L NGTG +GG L A+ +L +SPV EFK +R + I+
Sbjct: 410 ---------LGNGTGAAVIFGATGGVMEAALRTAVWKLTGEAADSPV-EFKDVRGVEGIK 459
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEK 410
A + GD+T++ + +G N + + K+K + FIEIMACP GC+NGG Q I+
Sbjct: 460 TAEYKVGDLTVKVAVVSGLANAKKFLTKVKNGEVECHFIEIMACPGGCVNGGGQVIQPAD 519
Query: 411 VASPKETALELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
V + + E L L + + E+ ++ +Y+ +LG + +L+TSY
Sbjct: 520 VRNFTDIRAERAKALYSLDDANKLRKSHESPDVKEVYENFLGEPGSHIAHEILHTSY 576
>gi|374297589|ref|YP_005047780.1| hydrogenase, Fe-only [Clostridium clariflavum DSM 19732]
gi|359827083|gb|AEV69856.1| hydrogenase, Fe-only [Clostridium clariflavum DSM 19732]
Length = 1148
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 216/425 (50%), Gaps = 45/425 (10%)
Query: 56 NGREEKLKKVEISL--TDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNEN 112
NGR+ K + L TDC++C C+T+ L ++ +V++ I +N
Sbjct: 655 NGRQLVGTKSGLPLQETDCVSCGQCVTACPCGALDYRRDKGKVLRAIHDN---------- 704
Query: 113 TKTIVLSLAIQPVLSLGAK-FALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
K V+ V SL +K + + E+ A + G K+LG D V D A +++E
Sbjct: 705 -KKTVIGFVAPAVRSLISKTYNIPFEKTSAFMAGLLKKLGFDKVFDFTFAADLTIMEETT 763
Query: 172 EFLDRFLSGG-GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
EFL R + G P FTS CPGW+ + E+ + E I+P++S KSPQ +MG+ +K H A+
Sbjct: 764 EFLTRISNKGVMPQFTSCCPGWINFVERRYPE-IIPHLSTCKSPQMMMGATVKNHYAKLA 822
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQ 290
G++ ++ V+++PC KK EA+R +F + G RDVD V+T E+ ++ E +
Sbjct: 823 GLNKEDLFVVSIVPCIAKKYEAARPEFAPD--GIRDVDAVLTTTEMIEMVRLENIDVSQV 880
Query: 291 EEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLC-PGESPVVEFKP 344
E P + P+R V+G G SGG A L A+ +L + ++F+
Sbjct: 881 E--------PQEFDEPYRQ--VSGAGILFGASGGVAEAALRMAVEKLTGKALTDQLDFEE 930
Query: 345 LRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRK-RLPYDFIEIMACPSGCLNG 402
+R + ++EAT + +R + +G +N + +I+K+ + + YD IE+MACP GC+ G
Sbjct: 931 IRGFEGVKEATVDVNNAKVRVAVVSGLQNAEPIIEKIIQGVDVGYDLIEVMACPGGCICG 990
Query: 403 GAQIRNEKVASPKETALELETILCDLAK----SEPRENATLEHLYKAWLGGKSTDKGKHM 458
EK+ + + + IL ++ K + +EN + LY+ + G ++ +
Sbjct: 991 AGHPVPEKI----DDMEKRQQILVNIDKISKYRKSQENPDILRLYEDFYGEPNSHLAHEL 1046
Query: 459 LNTSY 463
L+T Y
Sbjct: 1047 LHTHY 1051
>gi|387818042|ref|YP_005678387.1| periplasmic [Fe] hydrogenase large subunit [Clostridium botulinum
H04402 065]
gi|322806084|emb|CBZ03651.1| periplasmic [Fe] hydrogenase large subunit [Clostridium botulinum
H04402 065]
Length = 577
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 201/408 (49%), Gaps = 33/408 (8%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA--SSNENTKTIVLSLAIQP 124
I T+C C C++ + +T+ NN + + ++ K +++ A
Sbjct: 191 IKNTNCTFCGQCVSVCPTGALTEV-----------NNTSRVWDALSQKDKVVIVQTAPAI 239
Query: 125 VLSLGAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F L V K+ ++LG V D A +++E +EF+ R GG
Sbjct: 240 RATLGEEFGLEPGIAVTGKMVAALRQLGFSKVFDTDFAADLTIMEEASEFIHRLEHGGTL 299
Query: 183 PLFTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS CPGW+ + E + + + +P S KSPQQ+ G++ K++LAEK+ V P I V+
Sbjct: 300 PMLTSCCPGWIKFFEHNFNDLMDIP--SSCKSPQQMFGAIAKSYLAEKMKVDPKDIIVVS 357
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA R + G DVD VI+ EL ++++ + +LQEE+ D P
Sbjct: 358 VMPCLAKKYEAKREEMKRN--GIPDVDIVISTRELAKMIVEAGIDFNSLQEEE---FDNP 412
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
E ++ GT +GG L A + G VEF +R D IREAT D
Sbjct: 413 LGESTGASVIF--GT-TGGVMEAALRTAYEWVTKGTLKDVEFIEVRGEDGIREATVNIKD 469
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
++ IA+G N + L+ ++ + Y IEIMACPSGC++GG Q + + +
Sbjct: 470 TEVKVAIASGLGNARKLLNDIRNGKSKYHMIEIMACPSGCVDGGGQPYIYGDTNILKKRT 529
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
AL E ++ KS EN ++ LY+ +LG +K +L+T Y
Sbjct: 530 EALYKEDSNKEIRKS--HENPYIKKLYEEYLGKPYGEKAHELLHTKYR 575
>gi|312135115|ref|YP_004002453.1| hydrogenase, fe-only [Caldicellulosiruptor owensensis OL]
gi|311775166|gb|ADQ04653.1| hydrogenase, Fe-only [Caldicellulosiruptor owensensis OL]
Length = 579
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 203/415 (48%), Gaps = 37/415 (8%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C C CI + + ++ +++ KA +++N K +V+ A
Sbjct: 185 SLNDVACTMCGQCIQACPVGALREKDSTDIV--------WKALADKN-KYVVVQTAPAVR 235
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F L +V K+ K LG D V D A +++E E ++R +GG P
Sbjct: 236 VALGEEFGLPIGTRVTGKMVTALKMLGFDKVFDTDTAADLTIMEEGTELINRIKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L TS PGW+ + E EF L +S KSP ++ G+++KT+ A+K+G+ P++++ V++M
Sbjct: 296 LITSCSPGWIKFCEHYFPEF-LDNLSTCKSPHEMFGAILKTYFAQKMGIDPANMFVVSVM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA R + GY DVD V+T EL ++ +E ++ P D
Sbjct: 355 PCTAKKFEAQREELAAS--GYPDVDAVLTTRELARMI---------KEAGIDFVNLP-DS 402
Query: 304 HNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTC 357
H M G G +GG L L VE +R + IREA
Sbjct: 403 HFDEPMGDATGAGVIFGTTGGVMEAALRTVYEVLTGKTLENVEITQVRGLEGIREAEIDV 462
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKE 416
G + ++ +A+G N + L++ +K Y FIEIMACP GC+ GG Q I + K+ +
Sbjct: 463 GSMKIKAAVAHGLANAKKLLEMVKNGEKEYHFIEIMACPGGCIMGGGQPIVHAKIKEKVD 522
Query: 417 TALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
A + + D +S P EN T++ LY+ +L +++K H+L+T Y P
Sbjct: 523 VAKLRASAIYDEDRSLPIRKSHENPTVKRLYEEFLDHPNSEKAHHILHTHYKKRP 577
>gi|325845872|ref|ZP_08169070.1| ferredoxin hydrogenase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481778|gb|EGC84810.1| ferredoxin hydrogenase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 577
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 206/406 (50%), Gaps = 28/406 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C C C++ + +T++S+ +E+ K++ E+ K +++ +A ++L
Sbjct: 192 TTCTFCGQCLSVCPTGALTEKSNIKEIWKLL-----------ESDKHLIVQVAPAVRVAL 240
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLF 185
G F E V ++ + LG D V D A +++E NEF+ R L+G G P+
Sbjct: 241 GEMFGRKPGESVEGEMVTALRNLGFDKVFDTNFAADLTIMEEANEFVQR-LNGKGKLPIL 299
Query: 186 TSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS CPGWV + E+ + I +P S KSP ++ G++ KT+ AEK+G P I V++MP
Sbjct: 300 TSCCPGWVNFMEQQFSDLIDIP--SSCKSPHEMFGAIAKTYYAEKIGKKPEDIKVVSIMP 357
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK EA R + NE GY DVD V+T EL ++ E+ D D P E
Sbjct: 358 CISKKYEAKRDELENE--GYSDVDIVLTTRELGAMIKEAGIDFNKLEKSD--FDNPMGES 413
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLR 363
+ GT SGG + A + E VEF+ LR I++A ++
Sbjct: 414 TGAGDIF--GT-SGGVIEATIRTAYDTITGEELEKVEFEDLRGLKGIKQAKVDINGREIK 470
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKETALELE 422
+ANG N + L++KL+ K + D IE+MACP GC+ GG Q N K++ KE + L
Sbjct: 471 IAVANGLGNTRKLLEKLRNKEIDLDAIEVMACPGGCIGGGGQPYHNGKISILKERSKGLY 530
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
I + + +N ++ LY+ +LG ++K K +L+TSY PK
Sbjct: 531 QIDKNKKLRKSYQNPYIKKLYQEYLGEVGSEKAKELLHTSYKARPK 576
>gi|336421060|ref|ZP_08601220.1| hypothetical protein HMPREF0993_00597 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336002419|gb|EGN32528.1| hypothetical protein HMPREF0993_00597 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 576
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 205/419 (48%), Gaps = 48/419 (11%)
Query: 67 ISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I DC C CIT L + E+V I N IV++ + P
Sbjct: 183 IEEADCSLCGQCITHCPVGALRARDDTEKVWNAI-----------ANPDKIVIA-QVAPA 230
Query: 126 LSLGAKFALS---HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG-- 180
+ L+ E V K+ KR+GVD D + +++E EFL RF SG
Sbjct: 231 VRTAWSEGLNLDPEEATVGKILDALKRMGVDYAFDTAFSADLTIMEEATEFLKRFTSGEL 290
Query: 181 -GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
P+FTS CPGWV + KS ++ Y+S KSPQQ+ G+++KT+ AEK+GV P IY
Sbjct: 291 KDRPMFTSCCPGWVRFV-KSQFPHMVKYLSTAKSPQQMFGAIMKTYFAEKIGVSPEQIYT 349
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILD 298
V++MPC KK E FY E G+ DVD VIT EL +++ + ++ TL++ K D
Sbjct: 350 VSVMPCVAKKDEREMELFYGEYAGH-DVDAVITTRELIKMIRSAHISPDTLEDIKS---D 405
Query: 299 WPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPDIR 351
P E G+G+G G V+ A+R L E+P V+ F+ +R+P +
Sbjct: 406 TPMRE----------GSGAGVIFGTTGGVMEAALRSAYYLLKSENPDVDAFRVVRSPGFQ 455
Query: 352 ------EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
EA FT D+T++ + +G N + L+++++R+ + YDF+E+MACP GC+ GG Q
Sbjct: 456 ENNGVVEADFTIDDITVKTAVVSGLANTRVLLKRIEREEVHYDFVEVMACPGGCVGGGGQ 515
Query: 406 IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
++ + L + EN + +Y +L ++ K +L+T +
Sbjct: 516 PIHDGEERAYDRGKNLYMLDAGANVRFSHENRDIIRIYDEYLEKPNSHKAHMLLHTEHR 574
>gi|167759826|ref|ZP_02431953.1| hypothetical protein CLOSCI_02189 [Clostridium scindens ATCC 35704]
gi|167662445|gb|EDS06575.1| hydrogenase, Fe-only [Clostridium scindens ATCC 35704]
Length = 576
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 205/419 (48%), Gaps = 48/419 (11%)
Query: 67 ISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I DC C CIT L + E+V I N IV++ + P
Sbjct: 183 IEEADCSLCGQCITHCPVGALRARDDTEKVWNAI-----------ANPDKIVIA-QVAPA 230
Query: 126 LSLGAKFALS---HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG-- 180
+ L+ E V K+ KR+GVD D + +++E EFL RF SG
Sbjct: 231 VRTAWSEGLNLDPEEATVGKILDALKRMGVDYAFDTAFSADLTIMEEATEFLKRFTSGEL 290
Query: 181 -GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
P+FTS CPGWV + KS ++ Y+S KSPQQ+ G+++KT+ AEK+GV P IY
Sbjct: 291 KDRPMFTSCCPGWVRFV-KSQFPHMVKYLSTAKSPQQMFGAIMKTYFAEKIGVSPEQIYT 349
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILD 298
V++MPC KK E FY E G+ DVD VIT EL +++ + ++ TL++ K D
Sbjct: 350 VSVMPCVAKKDEREMELFYGEYAGH-DVDAVITTRELIKMIRSAHISPDTLEDIKS---D 405
Query: 299 WPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPDIR 351
P E G+G+G G V+ A+R L E+P V+ F+ +R+P +
Sbjct: 406 TPMRE----------GSGAGVIFGATGGVMEAALRSAYYLLKSENPDVDAFRVVRSPGFQ 455
Query: 352 ------EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
EA FT D+T++ + +G N + L+++++R+ + YDF+E+MACP GC+ GG Q
Sbjct: 456 ENNGVVEADFTIDDITVKTAVVSGLANTRVLLKRIEREEVHYDFVEVMACPGGCVGGGGQ 515
Query: 406 IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
++ + L + EN + +Y +L ++ K +L+T +
Sbjct: 516 PIHDGEERAYDRGKNLYMLDAGANVRFSHENRDIIRIYDEYLEKPNSHKAHMLLHTEHR 574
>gi|399216842|emb|CCF73529.1| unnamed protein product [Babesia microti strain RI]
Length = 510
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 214/484 (44%), Gaps = 110/484 (22%)
Query: 8 GVLQLTDLDDFIGPSQECIKPIPIEKPS---GPRTGAKIRIQDDGAYIQETNGREEKLKK 64
G ++L+ L+D++ PS ECI P+ K S PRT + ++ G +
Sbjct: 2 GTVKLSGLNDYLHPSPECILPLTKTKKSFEVTPRTDKDV----------DSVGNQP---- 47
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNE--NTKTIVLSLAI 122
V++SL+DCL+CSGC+TS+ +L ENN + ++ +K VLS++
Sbjct: 48 VKVSLSDCLSCSGCLTSSAPML--------------ENNFYLEVFDKLKGSKCPVLSIST 93
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
Q +LSL + L + ++ +F GV V + +A L E + EF D+
Sbjct: 94 QSLLSLSTMYGLKLTETFLRIKKYFIGKGVKYVFNQSLAEAIQLQESKKEF-DKSYKSNT 152
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK--THLAEKL---------- 230
L S CPGWV YAEKS L +S + Q + G L+K + K+
Sbjct: 153 TLICSNCPGWVIYAEKSLDREFLGNMSTIMPLQAIQGLLVKFVVTIRHKMEFNMFKYREI 212
Query: 231 ------------GVHPSHIYHVTLMPCYDKKLEASRADFY----------------NEEL 262
+ PS IYH+ + PC+DKKLE R D N
Sbjct: 213 FNPLLLPIININEITPSDIYHLCITPCHDKKLELLRPDLVANYSNLCKLLQIDNDSNSVK 272
Query: 263 GYRDVDCVITAVELEVLLANELAT-TTLQEE--KDGILDWPWDEHNPHRMLLVNGTG--- 316
+D VIT ELE LL ++ +++ +E D L P D + +L + G
Sbjct: 273 TTSLIDGVITTGELEQLLNDDFYNISSVNDELYADSDLLTPVDLESIKSLLGIQQNGVTN 332
Query: 317 -----------------SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF---- 355
SGGY + +A ++ V+FK + N D ++AT
Sbjct: 333 DIINSGIMPYDNTEFVHSGGYGEELFKYAAKRYHGKIIDTVKFKNVTNKDFKQATLLTHD 392
Query: 356 --------TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
+C T++ +A GFRNI N++ +K L ++++E+MACP GC+NGG QI+
Sbjct: 393 NIDNKEIKSCDKPTIKITLATGFRNIANVVSNIKT-NLGFNYVELMACPGGCINGGGQIK 451
Query: 408 NEKV 411
+V
Sbjct: 452 QLQV 455
>gi|335427597|ref|ZP_08554526.1| hydrogenase, Fe-only [Haloplasma contractile SSD-17B]
gi|334894591|gb|EGM32777.1| hydrogenase, Fe-only [Haloplasma contractile SSD-17B]
Length = 584
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 200/412 (48%), Gaps = 48/412 (11%)
Query: 72 CLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C CI + S L + + V I N+ K +V A +LG
Sbjct: 191 CIYCGQCINACPVSALKEKPEIDRVWDAI----------NDEKKYVVFQTAPAVRAALGE 240
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F + +V K+ +RLG + V D A +++E NE LDR +GG PL TS
Sbjct: 241 EFGMEIGNRVTGKMVAALRRLGGNKVFDTNFAADLTIMEEANELLDRIKNGGTLPLITSC 300
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGWV E + EFI P +S KSP Q++G++ K++ AEK+GV+P ++Y V++MPC K
Sbjct: 301 SPGWVRILENYYPEFI-PNLSTCKSPHQMLGAVTKSYYAEKIGVNPKNMYVVSVMPCIAK 359
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDW---PWDEHN 305
K E R + E G RD+D VIT EL ++ K+ +D+ P +E++
Sbjct: 360 KFEKDREEM--EVNGIRDIDAVITTRELAKMI------------KEAGIDFNKLPNEEYD 405
Query: 306 PHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGD 359
+ + +G G +GG L A L + E+ +R +I+EA+ T G
Sbjct: 406 TA-LGIYSGAGVIFGATGGVMEAALRTAADVLEGKDLETFEYTGVRGVENIKEASLTLGG 464
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNE--KV 411
+ +G + L++ +K Y FIEIM C GC+NGG Q I+N V
Sbjct: 465 NEYNIAVVHGGNAAKQLLEMVKNGEKNYHFIEIMGCTGGCVNGGGQPHVHSKIKNSGIDV 524
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ + AL E LC + KS +N ++ LY+ +LG ++ K +L+T Y
Sbjct: 525 RTLRAKALYEEDQLCTVRKS--HQNKAIQELYRDFLGEPNSHKSHELLHTHY 574
>gi|323703143|ref|ZP_08114797.1| hydrogenase, Fe-only [Desulfotomaculum nigrificans DSM 574]
gi|333923220|ref|YP_004496800.1| hydrogenase, Fe-only [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323531920|gb|EGB21805.1| hydrogenase, Fe-only [Desulfotomaculum nigrificans DSM 574]
gi|333748781|gb|AEF93888.1| hydrogenase, Fe-only [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 593
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 216/443 (48%), Gaps = 41/443 (9%)
Query: 44 RIQDDGAYIQETNGREEKLKKVE---ISLTDCLACSGCITSAESVLITQQ-SHEEVMKVI 99
++Q GA +G EE + V I+ T C+ C CI IT+ S + K +
Sbjct: 160 QVQGIGALGYVRHGAEEIIDTVSGLPIAETSCIYCGQCINVCPVGAITENLSIYQFTKAV 219
Query: 100 RENNAHKASSNENTKTIVLSLAIQPVLSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDV 158
+ + T+++ +A ++LG +F L + V KL + LGVD V +
Sbjct: 220 ADPDM----------TVLVQIAPAVKVALGEEFKLPAGTDVSGKLVTALRLLGVDKVFNT 269
Query: 159 GIAHCFSLVELENEFLDRFL-SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQV 217
+ +++E EFL R SG P+ TS CP WV +AE+++ + +LP++S KSPQQ+
Sbjct: 270 DFSADLTIMEEGTEFLGRLNNSGQLPMITSCCPSWVKFAEQNYPQ-LLPHLSSCKSPQQM 328
Query: 218 MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELE 277
G++ KT A+K ++P I V++MPC KK EASR + + G R+VD V+T EL
Sbjct: 329 FGAIAKTFYAQKENLNPGKICVVSVMPCVTKKFEASRPEMARD--GIREVDIVLTTRELA 386
Query: 278 VLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCP 334
L+ L + DG D+ +D L TG+G G V+ A+R +
Sbjct: 387 KLI--RLNKINFNQLADG--DFDYD--------LGFATGAGTIFGVTGGVMEAAVRTISE 434
Query: 335 ----GESPVVEFKPLRN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDF 389
+ +EF P+R ++EA T TLR + +G RN +++++K PY F
Sbjct: 435 VITGTQREKIEFMPVRGLAGVKEAEITLNGQTLRLAVVSGARNAARIMEQIKDGSSPYHF 494
Query: 390 IEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGG 449
IE+M CP GC+ GG Q + A L I A + EN ++ +Y+ +L
Sbjct: 495 IEVMGCPGGCIAGGGQPLPVMSTEIQNRARGLYAIDEGKAVRKSHENPAIKAVYEQFLTE 554
Query: 450 KSTDKGKHMLNTSYHNIPKNNIA 472
+ +L+T Y + ++NI+
Sbjct: 555 PNGHLAHELLHTHYTD--RSNIS 575
>gi|170756324|ref|YP_001781395.1| [Fe] hydrogenase [Clostridium botulinum B1 str. Okra]
gi|429247282|ref|ZP_19210540.1| [Fe] hydrogenase [Clostridium botulinum CFSAN001628]
gi|169121536|gb|ACA45372.1| iron hydrogenase 1 [Clostridium botulinum B1 str. Okra]
gi|428755686|gb|EKX78299.1| [Fe] hydrogenase [Clostridium botulinum CFSAN001628]
Length = 577
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 200/408 (49%), Gaps = 33/408 (8%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA--SSNENTKTIVLSLAIQP 124
I T+C C C++ + +T+ NN K + ++ K +++ A
Sbjct: 191 IKNTNCTFCGQCVSVCPTGALTEV-----------NNTSKVWDALSQKDKVVIVQTAPAI 239
Query: 125 VLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F L V K+ ++LG V D A +++E +EF+ R GG
Sbjct: 240 RAALGEEFGLEPGTTVTGKMVAALRQLGFSKVFDTDFAADLTIMEEASEFIHRLEHGGTL 299
Query: 183 PLFTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS CPGW+ + E + + + +P S KSPQQ+ G++ K++LAEK+ V P I V+
Sbjct: 300 PMLTSCCPGWIKFFEHNFNDLMDIP--SSCKSPQQMFGAIAKSYLAEKMKVDPKDIIVVS 357
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA R + G DVD VI+ EL ++++ + +LQEE+ D P
Sbjct: 358 VMPCLAKKYEAKREEMKRN--GIPDVDIVISTRELAKMIVEAGIDFNSLQEEE---FDNP 412
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
E ++ GT +GG L A + G VEF +R + IREAT D
Sbjct: 413 LGESTGASVIF--GT-TGGVMEAALRTAYEWVTKGTLKDVEFIEVRGEEGIREATVNIKD 469
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
++ IA+G N + L+ ++ + Y IEIMACPSGC++GG Q + + +
Sbjct: 470 TEVKVAIASGLGNARKLLNDIRNGKSKYHMIEIMACPSGCVDGGGQPYIYGDTNILKKRT 529
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
AL E + KS EN ++ LY+ +LG +K +L+T Y
Sbjct: 530 EALYKEDSNKQIRKS--HENPYIKKLYEEYLGKPYGEKAHELLHTKYR 575
>gi|387233127|gb|AFJ73533.1| iron hydrogenase precursor [Neocallimastix frontalis]
Length = 636
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 212/421 (50%), Gaps = 41/421 (9%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
++ T C+ C C IT+++ EV++V+R+ ++ + K +V S A +
Sbjct: 227 MNFTKCVECGQCSQVCPVGAITERN--EVIEVLRQLDSKR-------KILVCSTAPAIRV 277
Query: 127 SLGAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
+L +F + K+ ++LG D + D + +++E E ++R +GG P+
Sbjct: 278 ALAEEFNADPDFNFTGKMVAGLRKLGFDYIFDTNFSADLTIMEEGTELINRLNNGGKFPM 337
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGW+ EKS+ E + +S KSPQQ++G++IK++ A+KLGV I HV++MP
Sbjct: 338 FTSCCPGWINMVEKSYPE-LRENLSTCKSPQQMIGAVIKSYFAKKLGVSTEDIIHVSVMP 396
Query: 245 CYDKKLEASRADFYN---EELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
C KK EA R +F + Y D+D V+T EL L+ +L E D D P
Sbjct: 397 CTAKKGEAKRPEFVQKGKDGKNYPDIDYVLTTRELLTLM--KLKKVNPAELADDKFDSPL 454
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIR--QLCPG-ESPVV--EFKPLRNPD-IREATF 355
+ L G V+ A+R Q+ G E+P+ E K +R + I+ AT
Sbjct: 455 GISSSAGNLF-------GVTGGVMEAAVRTAQIITGVENPIPLGELKAVRGLEGIKAATV 507
Query: 356 TCG-----DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
D+ +R + +G NIQ ++K+K K + +DF+E+M CP GC+NGG Q K
Sbjct: 508 PLKTKEGKDINVRAAVVSGGANIQKFLEKIKNKEVEFDFVEMMMCPGGCINGGGQ---PK 564
Query: 411 VASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
A PK +++ + ++ R EN ++ +YK +L + +L+T Y++
Sbjct: 565 SADPKIVTKKMQRMYTMDEQATLRLSHENEEIKQIYKEFLIEPNGHLSHELLHTHYNDRS 624
Query: 468 K 468
K
Sbjct: 625 K 625
>gi|167772589|ref|ZP_02444642.1| hypothetical protein ANACOL_03968 [Anaerotruncus colihominis DSM
17241]
gi|167665067|gb|EDS09197.1| hydrogenase, Fe-only [Anaerotruncus colihominis DSM 17241]
Length = 584
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 194/405 (47%), Gaps = 33/405 (8%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C++C CI + I ++ +EV A+ N+ +K +V+ A +LG
Sbjct: 194 CVSCGQCIVVCPTGAIYEKDQTDEVW----------AALNDPSKHVVVQTAPSIRATLGE 243
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
F + V K+ +R+G + V D +A ++VE +EF++R +GG P+ TS
Sbjct: 244 AFGMPVGTNVTGKMVAALRRIGFEKVFDTDLAADMTIVEEAHEFVERVKNGGVLPMITSC 303
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGW+ Y E H + I P +S KSPQQ+ G+ +KT AEK+G I V +MPC K
Sbjct: 304 SPGWIKYCEHYHPDMI-PNLSTCKSPQQMFGATVKTWYAEKMGWDKKDIVVVGVMPCTAK 362
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K E R D G DVD +T E+ ++ + A E D D P E
Sbjct: 363 KFEVRRDDEDAAGSGIPDVDIALTTREIARMI--DRAGIQFTELPDEEFDSPMGESTGAS 420
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCPGESPV--VEFKPLR-NPDIREATFTCGDVTLRFC 365
++ +GG L A + G P+ VEF +R ++EA++ GD+T+
Sbjct: 421 VIF---GATGGVMEAALRTAAEWV--GGKPLEQVEFTDVRGTAGVKEASYQIGDLTVNVA 475
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKETA 418
+A+G N + L++++KR Y FIEIM CP GC+NGG Q +RN + S + A
Sbjct: 476 VASGLANAKKLLEQVKRGMKNYHFIEIMGCPGGCVNGGGQPVQPASVRNFVDLKSIRAKA 535
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L L KS EN L +YK + G + +L+TSY
Sbjct: 536 LYDADEAKTLRKS--HENPALLTIYKEYFGEFGSHLAHRILHTSY 578
>gi|167750765|ref|ZP_02422892.1| hypothetical protein EUBSIR_01743 [Eubacterium siraeum DSM 15702]
gi|167656200|gb|EDS00330.1| hydrogenase, Fe-only [Eubacterium siraeum DSM 15702]
Length = 583
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 204/417 (48%), Gaps = 44/417 (10%)
Query: 65 VEISLTDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
++++ T C++C CIT+ + L + ++V + + K +V+ A
Sbjct: 186 LDLAETACVSCGQCITACPTGALAEKDDTDKVWDALADPE----------KVVVVQTAPA 235
Query: 124 PVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
SLG F V K+ +RLG + V D +++E +EFLDR +GG
Sbjct: 236 VRASLGEAFGYPMGTPVEGKMVAALRRLGFNAVFDTNFGADLTIMEESHEFLDRVTNGGV 295
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS PGW+ + E EFI P +S KSPQQ+ G++ KT+ A+K+G+ P +I V+
Sbjct: 296 LPMITSCSPGWIRFCEAYFPEFI-PNLSSCKSPQQMNGAITKTYWAKKMGIDPKNIVSVS 354
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK E R D G DVD IT EL V + N A ++ D + D P
Sbjct: 355 VMPCTAKKFEIGRED--QSAAGVPDVDISITTREL-VKMINR-AGLRFRDLPDEVADSP- 409
Query: 302 DEHNPHRMLLVNGTG-------SGGYAHNVLSHAIRQLC--PGESPVVEFKPLRNPD-IR 351
L NGTG +GG L A+ +L +SPV EFK +R + I+
Sbjct: 410 ---------LGNGTGAAVIFGATGGVMEAALRTAVWKLTGEAADSPV-EFKDVRGVEGIK 459
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEK 410
A + GD+T++ + +G N + + ++K + FIEIMACP GC+NGG Q I+
Sbjct: 460 TAEYKVGDLTVKVAVVSGLANAKKFLTQVKNGEVECHFIEIMACPGGCVNGGGQVIQPAD 519
Query: 411 VASPKETALELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
V + + E L L + + E+ ++ +Y+ +LG + +L+TSY
Sbjct: 520 VRNFTDIRAERAKALYSLDDANKLRKSHESPDVKEVYENFLGEPGSHIAHEILHTSY 576
>gi|325681306|ref|ZP_08160835.1| ferredoxin hydrogenase [Ruminococcus albus 8]
gi|324106997|gb|EGC01284.1| ferredoxin hydrogenase [Ruminococcus albus 8]
Length = 580
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 201/405 (49%), Gaps = 26/405 (6%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
++ T C+ C CI S +T++S E+ A ++ K I + A
Sbjct: 186 LASTACVGCGQCIVSCPVGALTEKSSEK--------KVWDAIADPEKKVIFFT-APSIRA 236
Query: 127 SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
+LG +F V K+ +RLG D V ++ + ++VE NE ++R +GG P+
Sbjct: 237 TLGEEFGNPVGTNVEGKMVAAIRRLGPDQVFNMDVTADLTIVEEANELIERITTGGTLPM 296
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGWV + E + +F LP++S KSPQQ+ G+++K++ A+K + P +++ V+++P
Sbjct: 297 FTSCCPGWVKFCEHFYPDF-LPHLSSCKSPQQMFGAVLKSYYAQKNNIDPKNLFVVSVIP 355
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK E +R + E + DVD +T EL ++ A D D P++
Sbjct: 356 CTAKKFEVTREE--QREGDFDDVDVALTTRELGRMIRE--AGIDFNSLPDEQFDDPFETA 411
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLR 363
+ + +GG L A +L G+ +EF +R I+EAT+T G VT++
Sbjct: 412 SGAGAIF---GATGGVMEAALRTAAVKL-DGKCEPLEFTEVRGTKGIKEATYTVGGVTVK 467
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKETALELE 422
+A+G N + +++ + + Y F+EIMACP GC+NGG Q ++++ V + +
Sbjct: 468 VAVASGLANAREIVEGIIKGEKDYQFVEIMACPGGCINGGGQPVQSDSVRNFVDLKTLRA 527
Query: 423 TILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L D S E+ ++ LYK + K L+T+Y
Sbjct: 528 KALYDADSSMKLRMSHESPVMDMLYKEFFEKPGAHKAHEYLHTTY 572
>gi|312793481|ref|YP_004026404.1| hydrogenase, fe-only [Caldicellulosiruptor kristjanssonii 177R1B]
gi|344995973|ref|YP_004798316.1| hydrogenase, Fe-only [Caldicellulosiruptor lactoaceticus 6A]
gi|312180621|gb|ADQ40791.1| hydrogenase, Fe-only [Caldicellulosiruptor kristjanssonii 177R1B]
gi|343964192|gb|AEM73339.1| hydrogenase, Fe-only [Caldicellulosiruptor lactoaceticus 6A]
Length = 579
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 201/415 (48%), Gaps = 37/415 (8%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C C CI + + ++ +++ KA +++N K +V+ A
Sbjct: 185 SLNDVACTMCGQCIQACPVGALREKDSTDIV--------WKALADKN-KYVVVQTAPAVR 235
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F L +V K+ K LG D V D +++E E ++R +GG P
Sbjct: 236 VALGEEFGLPIGTRVTGKMVTALKMLGFDKVFDTDTGADLTIMEEGTELINRIKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L TS PGW+ + E EF L +S KSP ++ G+++KT+ A+K+G+ P++++ V++M
Sbjct: 296 LITSCSPGWIKFCEHYFPEF-LDNLSTCKSPHEMFGAILKTYFAQKMGIDPANMFVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA R + GY DVD V+T EL ++ +E ++ P D
Sbjct: 355 PCTAKKFEAQREELAAS--GYPDVDAVLTTRELARMI---------KEAGIDFVNLP-DS 402
Query: 304 HNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTC 357
H M G G +GG L L VE +R + IREA
Sbjct: 403 HFDDPMGDATGAGVIFGTTGGVMEAALRTVYEVLTGKTLENVEITQVRGLEGIREAEIDV 462
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKE 416
G + ++ +A+G N + L++ +K Y FIEIMACP GC+ GG Q I KV +
Sbjct: 463 GSMKIKAAVAHGLANAKKLLEMVKNGEKEYHFIEIMACPGGCIMGGGQPIVPAKVKEKID 522
Query: 417 TALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
A + + D +S P EN ++ LY+ +LG +++K H+L+T Y P
Sbjct: 523 VAKLRASAIYDEDRSLPIRKSHENPAVKRLYEEFLGHPNSEKAHHILHTHYKKRP 577
>gi|291530731|emb|CBK96316.1| hydrogenases, Fe-only [Eubacterium siraeum 70/3]
Length = 583
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 204/417 (48%), Gaps = 44/417 (10%)
Query: 65 VEISLTDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
++++ T C++C CIT+ + L + ++V + + K +V+ A
Sbjct: 186 LDLAETACVSCGQCITACPTGALAEKDDTDKVWDALADPE----------KVVVVQTAPA 235
Query: 124 PVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
SLG F V K+ +RLG + V D +++E +EFLDR +GG
Sbjct: 236 VRASLGEAFGYPMGTPVEGKMVAALRRLGFNAVFDTNFGADLTIMEESHEFLDRVTNGGV 295
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS PGW+ + E EFI P +S KSPQQ+ G++ KT+ A+K+G+ P +I V+
Sbjct: 296 LPMITSCSPGWIRFCEAYFPEFI-PNLSSCKSPQQMNGAITKTYWAKKMGIDPKNIVSVS 354
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK E R D G DVD IT EL V + N A ++ D + D P
Sbjct: 355 VMPCTAKKFEIGRED--QSAAGVPDVDISITTREL-VKMINR-AGLRFRDLPDEVADSP- 409
Query: 302 DEHNPHRMLLVNGTG-------SGGYAHNVLSHAIRQLC--PGESPVVEFKPLRNPD-IR 351
L NGTG +GG L A+ +L +SPV EFK +R + I+
Sbjct: 410 ---------LGNGTGAAVIFGATGGVMEAALRTAVWKLTGEAADSPV-EFKDVRGVEGIK 459
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEK 410
A + GD+T++ + +G N + + ++K + FIEIMACP GC+NGG Q I+
Sbjct: 460 TAEYKVGDLTVKVAVVSGLANAKKFLTQVKNGEVECHFIEIMACPGGCVNGGGQVIQPAD 519
Query: 411 VASPKETALELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
V + + E L L + + E+ ++ +Y+ +LG + +L+TSY
Sbjct: 520 VRNFTDIRAERAKALYSLDDANKLRKSHESPDVKEVYENFLGEPGSHIAHEILHTSY 576
>gi|89893682|ref|YP_517169.1| hypothetical protein DSY0936 [Desulfitobacterium hafniense Y51]
gi|423075239|ref|ZP_17063956.1| hydrogenase, Fe-only [Desulfitobacterium hafniense DP7]
gi|89333130|dbj|BAE82725.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361853713|gb|EHL05848.1| hydrogenase, Fe-only [Desulfitobacterium hafniense DP7]
Length = 1150
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 206/413 (49%), Gaps = 33/413 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC++C C+ + + +S E+ +V R + N+ KT V +A +
Sbjct: 670 TDCVSCGQCVNACPCGALDYRS--EIGRVFR-------ALNDLGKTTVAFVAPAVRSVVS 720
Query: 130 AKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+++ +S+++ + G K++G D V D A ++VE EFL R S P FTS
Sbjct: 721 SQYGVSYQEASRFIAGLLKKIGFDKVFDFTFAADLTIVEETTEFLTRLQSHKRIPQFTSC 780
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CPGWV + E+ + E I+PY+S KSPQ +MG+ +K H E + P +Y V+++PC K
Sbjct: 781 CPGWVNFVERRYPE-IIPYLSSCKSPQMMMGATVKNHFTELSEIDPKDLYVVSIVPCIAK 839
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K EA+R +F + G RDVD V+T+ E+ E+A L E D D P++
Sbjct: 840 KYEAARPEFATD--GIRDVDAVLTSTEM-----LEMADIKLIEPAD---VESQDFCEPYK 889
Query: 309 MLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPV--VEFKPLRN-PDIREATFTCGDV 360
V+G G SGG A L A+ +L GE+ ++++ +R I+EA
Sbjct: 890 R--VSGAGILFGASGGVAEAALRMAVEKLT-GEAITDRLDYQEVRGLQGIKEAAVEAKGK 946
Query: 361 TLRFCIANGFRNIQNLIQK-LKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
+ + +G N++ +++K ++ + YD IE+MACP GC+ G EK+ + ++
Sbjct: 947 KVNVAVISGLHNVEPILEKIIQGTEVGYDLIEVMACPGGCICGAGHPVPEKIDTLEKRQQ 1006
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIA 472
L I + +EN + LY + G ++ +L+T Y + + +A
Sbjct: 1007 VLVNIDQTSRYRKSQENPDILRLYDEYYGEANSPLAHKLLHTHYEAVKREPVA 1059
>gi|225569030|ref|ZP_03778055.1| hypothetical protein CLOHYLEM_05109 [Clostridium hylemonae DSM
15053]
gi|225161829|gb|EEG74448.1| hypothetical protein CLOHYLEM_05109 [Clostridium hylemonae DSM
15053]
Length = 583
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 193/406 (47%), Gaps = 33/406 (8%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + + ++ + ++++ I + + K +V+ A L
Sbjct: 193 TSCVSCGQCIAVCPTGALYEKDYTQQILDAIADPD----------KYVVVQTAPSVRAGL 242
Query: 129 GAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F V K+ +R+G D V D A +++E E LDR +GG PL T
Sbjct: 243 GEEFGYPMGTDVEGKMAAALRRVGFDKVFDTDWAADLTIMEEATELLDRVKNGGVLPLIT 302
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ Y E + + ++S KSPQQ+ G+++KT+ AEK G+ P I V++MPC
Sbjct: 303 SCSPGWIKYCEHYFPD-MTEHLSSCKSPQQMFGAMLKTYFAEKEGIDPKKIVSVSVMPCT 361
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWPWDEHN 305
KK E R D + G DVD IT EL L+ + T L +EK D P E
Sbjct: 362 AKKFEIGRDD--QDAAGVPDVDIAITTRELARLIKRCGIEFTVLPDEK---FDDPMGEST 416
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRF 364
++ +GG L A+ L E ++F +R + ++EA++ + ++
Sbjct: 417 GAAVIF---GATGGVMEAALRTAVEVLTGEELANLDFTDVRGTEGVKEASYNVAGMDVKV 473
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKET 417
+A+G N + L+ K+K Y FIEIM CP GC+NGG Q +RN V + +
Sbjct: 474 AVASGLNNARTLLNKVKSGEADYHFIEIMGCPGGCVNGGGQPQVSGDVRNFTDVRGIRAS 533
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L + KS EN ++ LY +LG + K L+TSY
Sbjct: 534 VLYNNDAAKPIRKS--HENPAIKKLYDEYLGEPGSHKAHETLHTSY 577
>gi|126700933|ref|YP_001089830.1| Iron hydrogenase [Clostridium difficile 630]
gi|115252370|emb|CAJ70211.1| Iron hydrogenase [Clostridium difficile 630]
Length = 461
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 215/438 (49%), Gaps = 49/438 (11%)
Query: 60 EKLKKVEISLTDCLACSGCITSAES----------VLITQQSHEEVMKVIRE-------- 101
E+ K EI+L C+ C C+ + +S L ++ E+ + I E
Sbjct: 31 EEGKPQEINLDRCVMCGQCVQTCKSYASVIDEGFEFLQEKKQEREIPESINEPIFAAYNV 90
Query: 102 ---NNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVA-KLCGFFKRLGVDLVLD 157
+ KA S+ N T+V A ++LG F + A K+ + L D V D
Sbjct: 91 CDIDKVKKALSDPNVFTMV-QCAPAVRVALGEDFGYYLGYLGAGKMAAALRALNFDRVYD 149
Query: 158 VGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
A +++E +E + R GG P+FTS CP WV + EK++ + + ++S KSPQQ
Sbjct: 150 TNFAADLTIMEEGSELIKRVTEGGTLPMFTSCCPAWVKFMEKNYPK-LTNHLSSCKSPQQ 208
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL 276
+ G++ KT+ AE V S I+ V++MPC KK E R + + GYRDVD V+T EL
Sbjct: 209 MGGAIFKTYGAEINNVDASKIFSVSIMPCTCKKYECDREEM--DSSGYRDVDVVLTTREL 266
Query: 277 EVLLANE-LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIR---QL 332
L+ + + L+EEK D P ++ + G V+ AIR +L
Sbjct: 267 AYLIKDMGIDFKNLREEK---FDSPLGSYSGAGTIF-------GVTGGVMEAAIRTGYEL 316
Query: 333 CPGES-PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFI 390
GES P VE K +R + R++T GD+ LR + +G +N+ +++ L++ +L DFI
Sbjct: 317 ITGESIPDVEVKQVRGENGFRKSTIKIGDLDLRVGVVSGLKNVIPVLEDLEKGKLDVDFI 376
Query: 391 EIMACPSGCLNGGAQIRNEKVASPKETALELETILC-----DLAKSEPRENATLEHLYKA 445
E+M CP GC++GG Q + + KE A E T LA + EN ++ LY
Sbjct: 377 EVMTCPVGCVSGGGQPKI-LLEEYKELAYENRTKATYVHDEHLAIRKSHENPDIKKLYDE 435
Query: 446 WLGGKSTDKGKHMLNTSY 463
+L +K H+L+T+Y
Sbjct: 436 YLVEPLGEKSHHLLHTTY 453
>gi|363754915|ref|XP_003647673.1| hypothetical protein Ecym_6488 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891310|gb|AET40856.1| hypothetical protein Ecym_6488 [Eremothecium cymbalariae
DBVPG#7215]
Length = 465
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 210/454 (46%), Gaps = 81/454 (17%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L +DL+DFI P CIKP + R G QDD + E ++ KV
Sbjct: 1 MSALLSESDLNDFISPGLACIKP------AEARHGES---QDDYGKL-EVGKESSEVSKV 50
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
ISL DCLAC+GCITS+E +L+ +QSH V E SS + +V+S++ Q
Sbjct: 51 SISLQDCLACAGCITSSEEILLGRQSH----GVFLEEWGKLPSS----RPLVVSISPQCR 102
Query: 126 LSLGAKFALSHEQVVAKLCGFF-KRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG-GP 183
LSL F + ++ L G F V+ + ++ + R L G GP
Sbjct: 103 LSLADYFHMEQGELDQCLIGMFHSYFNARYVVGTQMGRMVTIQQTNKYLSKRRLHGNEGP 162
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ S CPG+V YAEK+ + + P++ VKSPQQ+ G+L+ +++ +YH+ +M
Sbjct: 163 MLCSVCPGFVLYAEKTKPDLV-PFLLDVKSPQQITGALLLETVSD--------MYHLAIM 213
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL------ 297
PC+DKKLEASR D R+VDCVIT EL +L + + D L
Sbjct: 214 PCFDKKLEASRKD------SEREVDCVITPRELVTMLTELSVDISHYKSHDSSLIHRLSP 267
Query: 298 -DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT 356
W H G+ SGGYA+ L +++Q P S V + +
Sbjct: 268 PGWDPAVH----WSSSRGSSSGGYAYQYLL-SVQQAHPESSIVTLHGKISDVVEHRLLDQ 322
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLK-----------RKRL-------------------- 385
G++ GFRNIQN++++L RKR
Sbjct: 323 VGNIIASSTEVYGFRNIQNMVRRLLVKSSNRNVNILRKRHASRPKTPTQTNAANHQNVTQ 382
Query: 386 -PY--DFIEIMACPSGCLNGGAQIRNEKVASPKE 416
PY DFIE+MACP GC+NGG + E+ ++ ++
Sbjct: 383 DPYKTDFIEVMACPGGCINGGGLLNGEQSSAQRK 416
>gi|312127639|ref|YP_003992513.1| hydrogenase, fe-only [Caldicellulosiruptor hydrothermalis 108]
gi|311777658|gb|ADQ07144.1| hydrogenase, Fe-only [Caldicellulosiruptor hydrothermalis 108]
Length = 579
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 201/415 (48%), Gaps = 37/415 (8%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C C CI + + ++ +++ KA +++N K +V+ A
Sbjct: 185 SLNDVACTMCGQCIQACPVGALREKDSTDIV--------WKALADKN-KYVVVQTAPAVR 235
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F L +V K+ K LG D V D +++E E ++R +GG P
Sbjct: 236 VALGEEFGLPIGTRVTGKMVTALKMLGFDKVFDTDTGADLTIMEEGTELINRIKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L TS PGW+ + E EF L +S KSP ++ G+++KT+ A+K+G+ P++++ V++M
Sbjct: 296 LITSCSPGWIKFCEHYFPEF-LDNLSTCKSPHEMFGAILKTYFAQKMGIDPANMFVVSVM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA R + GY DVD V+T EL ++ +E ++ P D
Sbjct: 355 PCTAKKFEAQREELAAS--GYPDVDAVLTTRELARMI---------KEAGIDFVNLP-DS 402
Query: 304 HNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTC 357
H M G G +GG L L VE +R + IREA
Sbjct: 403 HFDDPMGDATGAGVIFGTTGGVMEAALRTVYEVLTGKTLENVEITQVRGLEGIREAEIDV 462
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKE 416
G + ++ +A+G N + L++ +K Y FIEIMACP GC+ GG Q I KV +
Sbjct: 463 GSMKIKAAVAHGLANAKKLLEMVKNGEKEYHFIEIMACPGGCIMGGGQPIVPAKVKEKVD 522
Query: 417 TALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
A + + D +S P EN ++ LY+ +LG +++K H+L+T Y P
Sbjct: 523 VAKLRASAIYDEDRSLPIRKSHENPAVKRLYEEFLGHPNSEKAHHILHTHYKKRP 577
>gi|85000289|ref|XP_954863.1| nuclear-architecture-related protein (NARF) or Fe-hydrogenase
[Theileria annulata strain Ankara]
gi|65303009|emb|CAI75387.1| nuclear-architecture-related protein (NARF) or Fe-hydrogenase,
putative [Theileria annulata]
Length = 666
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 145/614 (23%), Positives = 252/614 (41%), Gaps = 191/614 (31%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI----------------PIEKPSGPRTGAKIRIQDDG 49
+S ++++ L+D++ P +EC+ P+ E P+ G + D
Sbjct: 2 YSNAVKISGLNDYLNPGEECVLPLLKSDKKYEIKLNDKILDSETPNKGYLGEDLLNNDIY 61
Query: 50 AYIQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASS 109
+ +K K++ + L+DCL+CSGC+TS+E +L+ ++H +V++ ++ ++
Sbjct: 62 KNNKLNVTTVDKNKRITVGLSDCLSCSGCLTSSEEILLKDENHFKVLEKMKTSDF----- 116
Query: 110 NENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVEL 169
V+S++ Q + L + + + E+ KLC F+ LG LV D+G+A SL +
Sbjct: 117 ------CVISISPQTIFMLSSHYNMKAEKAFRKLCYLFRFLGAKLVFDIGLAELLSLTQS 170
Query: 170 ENEFLDRF---------------------------LSGGG--------PLFTSECPGWVC 194
++EF+D++ L+G P+ TS CPGW
Sbjct: 171 KDEFIDKYYNNNTVSSTSSSDLGVSNKIVNGINKDLNGENTRERRLNLPIITSHCPGWTL 230
Query: 195 YAEKSHGEFILPYISRVKSPQQVMGSLIK----------------------------THL 226
YAEK+ + ++ IS+V S Q + G L+K + L
Sbjct: 231 YAEKTLDQELVDLISKVPSSQVIQGLLVKILSHTINYYKTIYHINYLKLFISYSFLNSFL 290
Query: 227 AE----------------KLGVHPSHIYHVTLMPCYDKKLEASRADF---YNEELGYRD- 266
+ KL + IYH++++PCYDKK E R +F +N
Sbjct: 291 TDAKNYNTDGQNNIINNFKLTNTNTKIYHISIVPCYDKKFETIRTEFQLNFNSLFSLYQP 350
Query: 267 ---------------------VDCVITAVELEVLLAN-ELATTTLQEE-KDGILDWPW-- 301
VD +++ ++E +L++ L T L+EE D ++++ +
Sbjct: 351 DSNPTTSSDPDDSQALEKEPLVDDILSTSDIESILSSLGLKFTQLKEEPPDHLVNFLYFF 410
Query: 302 -----------------------DEHNPHRMLLVNG--TGSGGYAHNVLSHAIRQL--CP 334
D ++ R++ +G SGG+A + H+ +QL
Sbjct: 411 NKFNSISSLNIKHNLNLPTYDSKDYNHLKRLIRCSGLYAQSGGFAEEIFKHSCKQLFNMD 470
Query: 335 GESPVVEFKPLRNPDIREATFT--CGDVTLRFCIANGFRNIQNLIQKLKR---------- 382
++ ++F N D +E DV LRF IA GFRNIQN+I+ LK
Sbjct: 471 LDNSNLKFTETINNDFKECVLLDENNDVLLRFIIAYGFRNIQNIIKLLKSHKSTLDSSGN 530
Query: 383 --------------KRLPYDFIEIMACPSGCLNGGAQIRNEKVA---SPKETALELETIL 425
K D++E+MACP GC NG Q + S K L L +++
Sbjct: 531 YYQKQPDGLGNRNGKDFVCDYVELMACPGGCFNGAGQALQSTQSDQDSEKSLFLNLTSLI 590
Query: 426 CDLAKSEPRENATL 439
D + +N L
Sbjct: 591 PDFIHKKFFKNLNL 604
>gi|333897409|ref|YP_004471283.1| hydrogenase, Fe-only [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112674|gb|AEF17611.1| hydrogenase, Fe-only [Thermoanaerobacterium xylanolyticum LX-11]
Length = 581
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 195/410 (47%), Gaps = 47/410 (11%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C++C CI + I ++ H +++ + A +E K +V A ++LG +
Sbjct: 191 CISCGQCIEACPVGAIYEKDHTKMV--------YDALLDEK-KYVVAQTAPAVRVALGEE 241
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSEC 189
F + + +V K+ KRLG D V D A +++E NE L R GG P+ TS
Sbjct: 242 FGMPYGSIVTGKMVSALKRLGFDKVFDTDFAADLTIIEEGNELLKRLNEGGKLPMITSCS 301
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGW+ Y E+ + EFI +S KSP +MG++IK++ AEK G+ P I+ V++MPC KK
Sbjct: 302 PGWINYCERYYPEFI-DNLSTCKSPHMMMGAIIKSYFAEKEGIDPKDIFVVSIMPCTAKK 360
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRM 309
E R + G +DVD V+T EL ++ + D D P E + +
Sbjct: 361 GEIDRPQMIVD--GMKDVDAVLTTRELARMIKQ--SGIDFVSLPDSEYDNPLGESSGAAV 416
Query: 310 LLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IREATFTCGDV 360
+ G V+ A+R + + +VE + + N + I+EA G
Sbjct: 417 IF-------GATGGVMEAALRTV----ADIVEGRDIENFEYEEVRGLEGIKEAKIDIGGK 465
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALE 420
++ +ANG N + L+ K+K Y FIE+M CP GC+ GG Q + +P E L
Sbjct: 466 EIKIAVANGTGNAKKLLDKIKNGEAEYHFIEVMGCPGGCIMGGGQ----PIHNPNEKDLV 521
Query: 421 LETIL-------CDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E+ L DL + +N + LY+ +L +K H+L+T+Y
Sbjct: 522 RESRLKAIYEADKDLPIRKSHKNPMITKLYEEFLTSPLGEKSHHLLHTTY 571
>gi|210610147|ref|ZP_03288284.1| hypothetical protein CLONEX_00470 [Clostridium nexile DSM 1787]
gi|210152607|gb|EEA83613.1| hypothetical protein CLONEX_00470 [Clostridium nexile DSM 1787]
Length = 590
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 206/416 (49%), Gaps = 44/416 (10%)
Query: 67 ISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I + C C C+T L + E+V + + + N K +V +A
Sbjct: 183 IEESACSLCGQCVTHCPVGALRERNDTEKVWEALSDPN----------KIVVTQVAPAVR 232
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---G 181
+ G +F L +E V + K++G D V D + +++E EF+ RF SG
Sbjct: 233 TAWGEEFGLQPNEATVGMILDALKKMGADYVFDTCFSADLTIMEEATEFIQRFTSGELKD 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV +A KS ++ Y+S KSPQQ+ G+++KT+ A+KLGV P I+ V+
Sbjct: 293 RPMFTSCCPGWVRFA-KSQFPHMVKYVSSAKSPQQMFGTVMKTYFAQKLGVSPEQIFTVS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGILDWP 300
+MPC KK E F+ E G +D+D V+T E ++++ A ++ TL+ + D P
Sbjct: 352 IMPCLAKKGEQEMELFHGEYAG-KDIDVVLTTREFVKMIRAAHISPETLKNRES---DRP 407
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLR------N 347
E GTG+G G V+ A+R GE+ + F+ +R N
Sbjct: 408 MQE----------GTGAGVIFGTTGGVMEAALRSAYFFLKGENAAADAFQAVRAEGFNAN 457
Query: 348 PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
++EA F D+T+R + +G N + L++K++R + YDF+E+MACP GC+ GG Q
Sbjct: 458 HGVQEAEFQIDDITVRTAVVSGLGNTRALMKKIERGEVHYDFVEVMACPGGCVGGGGQPI 517
Query: 408 NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
++ E L + D +N ++ LY+ + G + K +L+T +
Sbjct: 518 HDGEERAFERGKRLYQLDADAKIRYSHDNPDIKRLYEEYFGEPNEHKAHMLLHTDH 573
>gi|423082808|ref|ZP_17071393.1| hydrogenase, Fe-only [Clostridium difficile 002-P50-2011]
gi|423085921|ref|ZP_17074356.1| hydrogenase, Fe-only [Clostridium difficile 050-P50-2011]
gi|357547336|gb|EHJ29224.1| hydrogenase, Fe-only [Clostridium difficile 002-P50-2011]
gi|357548312|gb|EHJ30178.1| hydrogenase, Fe-only [Clostridium difficile 050-P50-2011]
Length = 458
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 215/438 (49%), Gaps = 49/438 (11%)
Query: 60 EKLKKVEISLTDCLACSGCITSAES----------VLITQQSHEEVMKVIRE-------- 101
E+ K EI+L C+ C C+ + +S L ++ E+ + I E
Sbjct: 28 EEGKPQEINLDRCVMCGQCVQTCKSYASVIDEGFEFLQEKKQEREIPESINEPIFAAYSV 87
Query: 102 ---NNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVA-KLCGFFKRLGVDLVLD 157
+ KA S+ N T+V A ++LG F + A K+ + L D V D
Sbjct: 88 CDIDKVKKALSDPNVFTMV-QCAPAVRVALGEDFGYYLGYLGAGKMAAALRALNFDRVYD 146
Query: 158 VGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
A +++E +E + R GG P+FTS CP WV + EK++ + + ++S KSPQQ
Sbjct: 147 TNFAADLTIMEEGSELIKRVTEGGTLPMFTSCCPAWVKFMEKNYPK-LTNHLSSCKSPQQ 205
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL 276
+ G++ KT+ AE V S I+ V++MPC KK E R + + GYRDVD V+T EL
Sbjct: 206 MGGAIFKTYGAEINNVDASKIFSVSIMPCTCKKYECDREEM--DSSGYRDVDVVLTTREL 263
Query: 277 EVLLANE-LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIR---QL 332
L+ + + L+EEK D P ++ + G V+ AIR +L
Sbjct: 264 AYLIKDMGIDFKNLREEK---FDSPLGSYSGAGTIF-------GVTGGVMEAAIRTGYEL 313
Query: 333 CPGES-PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFI 390
GES P VE K +R + R++T GD+ LR + +G +N+ +++ L++ +L DFI
Sbjct: 314 ITGESIPDVEVKQVRGENGFRKSTIKIGDLDLRVGVVSGLKNVIPVLEDLEKGKLDVDFI 373
Query: 391 EIMACPSGCLNGGAQIRNEKVASPKETALELETILC-----DLAKSEPRENATLEHLYKA 445
E+M CP GC++GG Q + + KE A E T LA + EN ++ LY
Sbjct: 374 EVMTCPVGCVSGGGQPKI-LLEEYKELAYENRTKATYVHDEHLAIRKSHENPDIKKLYDE 432
Query: 446 WLGGKSTDKGKHMLNTSY 463
+L +K H+L+T+Y
Sbjct: 433 YLVEPLGEKSHHLLHTTY 450
>gi|254976913|ref|ZP_05273385.1| hydrogenase [Clostridium difficile QCD-66c26]
gi|255094299|ref|ZP_05323777.1| hydrogenase [Clostridium difficile CIP 107932]
gi|255102481|ref|ZP_05331458.1| hydrogenase [Clostridium difficile QCD-63q42]
gi|255308386|ref|ZP_05352557.1| hydrogenase [Clostridium difficile ATCC 43255]
gi|255316053|ref|ZP_05357636.1| hydrogenase [Clostridium difficile QCD-76w55]
gi|255518710|ref|ZP_05386386.1| hydrogenase [Clostridium difficile QCD-97b34]
gi|255651832|ref|ZP_05398734.1| hydrogenase [Clostridium difficile QCD-37x79]
gi|255657272|ref|ZP_05402681.1| hydrogenase [Clostridium difficile QCD-23m63]
gi|260684858|ref|YP_003216143.1| hydrogenase [Clostridium difficile CD196]
gi|260688516|ref|YP_003219650.1| hydrogenase [Clostridium difficile R20291]
gi|296451875|ref|ZP_06893593.1| ferredoxin hydrogenase [Clostridium difficile NAP08]
gi|296879729|ref|ZP_06903704.1| ferredoxin hydrogenase [Clostridium difficile NAP07]
gi|306521619|ref|ZP_07407966.1| hydrogenase [Clostridium difficile QCD-32g58]
gi|384362527|ref|YP_006200379.1| hydrogenase [Clostridium difficile BI1]
gi|423090386|ref|ZP_17078687.1| hydrogenase, Fe-only [Clostridium difficile 70-100-2010]
gi|260211021|emb|CBA66340.1| hydrogenase [Clostridium difficile CD196]
gi|260214533|emb|CBE07055.1| hydrogenase [Clostridium difficile R20291]
gi|296259292|gb|EFH06169.1| ferredoxin hydrogenase [Clostridium difficile NAP08]
gi|296429318|gb|EFH15190.1| ferredoxin hydrogenase [Clostridium difficile NAP07]
gi|357556606|gb|EHJ38196.1| hydrogenase, Fe-only [Clostridium difficile 70-100-2010]
Length = 458
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 215/438 (49%), Gaps = 49/438 (11%)
Query: 60 EKLKKVEISLTDCLACSGCITSAES----------VLITQQSHEEVMKVIRE-------- 101
E+ K EI+L C+ C C+ + +S L ++ E+ + I E
Sbjct: 28 EEGKPQEINLDRCVMCGQCVQTCKSYASVIDEGFEFLQEKKQEREIPESINEPIFAAYNV 87
Query: 102 ---NNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVA-KLCGFFKRLGVDLVLD 157
+ KA S+ N T+V A ++LG F + A K+ + L D V D
Sbjct: 88 CDIDKVKKALSDPNVFTMV-QCAPAVRVALGEDFGYYLGYLGAGKMAAALRALNFDRVYD 146
Query: 158 VGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
A +++E +E + R GG P+FTS CP WV + EK++ + + ++S KSPQQ
Sbjct: 147 TNFAADLTIMEEGSELIKRVTEGGTLPMFTSCCPAWVKFMEKNYPK-LTNHLSSCKSPQQ 205
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL 276
+ G++ KT+ AE V S I+ V++MPC KK E R + + GYRDVD V+T EL
Sbjct: 206 MGGAIFKTYGAEINNVDASKIFSVSIMPCTCKKYECDREEM--DSSGYRDVDVVLTTREL 263
Query: 277 EVLLANE-LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIR---QL 332
L+ + + L+EEK D P ++ + G V+ AIR +L
Sbjct: 264 AYLIKDMGIDFKNLREEK---FDSPLGSYSGAGTIF-------GVTGGVMEAAIRTGYEL 313
Query: 333 CPGES-PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFI 390
GES P VE K +R + R++T GD+ LR + +G +N+ +++ L++ +L DFI
Sbjct: 314 ITGESIPDVEVKQVRGENGFRKSTIKIGDLDLRVGVVSGLKNVIPVLEDLEKGKLDVDFI 373
Query: 391 EIMACPSGCLNGGAQIRNEKVASPKETALELETILC-----DLAKSEPRENATLEHLYKA 445
E+M CP GC++GG Q + + KE A E T LA + EN ++ LY
Sbjct: 374 EVMTCPVGCVSGGGQPKI-LLEEYKELAYENRTKATYVHDEHLAIRKSHENPDIKKLYDE 432
Query: 446 WLGGKSTDKGKHMLNTSY 463
+L +K H+L+T+Y
Sbjct: 433 YLVEPLGEKSHHLLHTTY 450
>gi|387233129|gb|AFJ73534.1| hydrogenase [Neocallimastix frontalis]
Length = 636
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 215/424 (50%), Gaps = 47/424 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
++ T C+ C C IT ++ EV+ V+R + + K +V S A +
Sbjct: 227 MNFTKCVECGQCSQVCPVGAITART--EVVDVLRHLDTKR-------KVVVCSTAPAIRV 277
Query: 127 SLGAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
+L +F+ + K+ ++LG D + D + +++E E +DR +GG P+
Sbjct: 278 ALAEEFSTEADFDFTGKMVAGLRKLGFDYIFDTNFSADLTIMEEGTELIDRLNNGGKFPM 337
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGW+ EKS+ E + +S KSPQQ++G++IK++ A+KLG+ I HV++MP
Sbjct: 338 FTSCCPGWINMVEKSYPE-LSDNLSSCKSPQQMIGAVIKSYFAKKLGLSTEDIIHVSIMP 396
Query: 245 CYDKKLEASRADFYN---EELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
C KK EA R +F + Y D+D VIT EL LL + E D D P
Sbjct: 397 CTAKKGEARRPEFVQKGKDGKDYPDIDYVITTRELLTLLKLKKINPA--ELPDDKFDSP- 453
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIR--QLCPG-ESPVV--EFKPLRNPD-IRE 352
L G+ +G G V+ AIR Q+ G E+P+ E K +R D I+
Sbjct: 454 ---------LGIGSSAGNLFGVTGGVMEAAIRTAQVITGVENPIPLGELKAIRGLDGIKA 504
Query: 353 A-----TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
A T +V++R + +G NIQ ++K+K K L +DFIE+M CP GC+NGG Q
Sbjct: 505 ANVPLKTKDGKEVSVRAAVVSGGANIQKFLEKIKNKELEFDFIEMMMCPGGCINGGGQ-- 562
Query: 408 NEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
K A P+ A +++ + +++ R EN + +YK +LG ++ +L+T Y+
Sbjct: 563 -PKSADPEIVAKKMQRMYTMDDQAKLRLCHENPEIIDVYKNFLGEPNSHLAHELLHTHYN 621
Query: 465 NIPK 468
+ K
Sbjct: 622 DRSK 625
>gi|119610198|gb|EAW89792.1| hCG30379, isoform CRA_b [Homo sapiens]
Length = 262
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 135/256 (52%), Gaps = 13/256 (5%)
Query: 23 QECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSA 82
+EC K + A Q++G G KL +I L+DCLAC C+T+
Sbjct: 9 KECSKKTKTDDQENVSADAPSPAQENG-----EKGEFHKLADAKIFLSDCLACDSCMTAE 63
Query: 83 ESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK 142
E V ++QQ+ ++ +V+ N +K K +V+S+ Q + AKF LS +
Sbjct: 64 EGVQLSQQNAKDFFRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
Query: 143 LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAE 197
LCGF K LGV V D IA FS++E + EF+ R+ P+ TS CPGWV YAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ G I ++ KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA +
Sbjct: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240
Query: 258 YNEELGYRDVDCVITA 273
G R DCV+T+
Sbjct: 241 PPALHGSRGADCVLTS 256
>gi|365988242|ref|XP_003670952.1| hypothetical protein NDAI_0F03910 [Naumovozyma dairenensis CBS 421]
gi|343769723|emb|CCD25709.1| hypothetical protein NDAI_0F03910 [Naumovozyma dairenensis CBS 421]
Length = 506
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 147/476 (30%), Positives = 218/476 (45%), Gaps = 106/476 (22%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P+ C KP I K + + D G Y E + +L+KV
Sbjct: 1 MSTLLSEEDLNDFISPALACTKPTVINK-------EPVNVNDKGEY--EVSKEPTELEKV 51
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN------TKTIVLS 119
I+L+DCLACSGCITS+E +++++QS+ + ++ N A +N K + +S
Sbjct: 52 SITLSDCLACSGCITSSEEIMLSRQSYSVFLNDWKKLNDLPADKEDNETVNNKKKILCVS 111
Query: 120 LAIQPVLSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCFS-LVELEN 171
+A Q +SL + +S E+ F K +G + ++ I+ L+ L+
Sbjct: 112 IAPQCRISLADNYDMSIEEFDLCFMNFIKNYFQGKYVVGTQMGRNLTISRTNDKLIALKK 171
Query: 172 E-FLDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
E LD P+ ++ CPG+V Y EK+ + P + VKSPQQ+ GSL+ LAE
Sbjct: 172 EGKLDE-----RPMLSAICPGFVIYTEKTKPNLV-PLLLNVKSPQQITGSLLMDSLAED- 224
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN---ELATT 287
+YH+TLMPC+DKKLEASR D G +V CVIT E +L + +
Sbjct: 225 ----EQMYHLTLMPCFDKKLEASRPD------GENEVHCVITPKEFVSMLEELEVDFNSY 274
Query: 288 TLQEEKDGILDWP--WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG---------E 336
+Q+E P WD +G+ SGGYA+ + ++ L PG
Sbjct: 275 RIQDENLFYEMSPEGWDPR--IHWSSNSGSSSGGYAYQYILE-MQNLNPGTKILEIPGKN 331
Query: 337 SPVVEFKPLRNPDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRL----------- 385
S VVE++ + DI T +GFRNIQN+++ L RK +
Sbjct: 332 SNVVEYRLIDPNDINRGTIASS------AELSGFRNIQNMVRNLDRKSIKNNGAKRKIQV 385
Query: 386 -----------------------------PY--DFIEIMACPSGCLNGGAQIRNEK 410
PY D+IE+ A P GC+NGG I NE+
Sbjct: 386 LRKRNTSTQMQKLSLSNNSNAINKPLVADPYKTDYIEVNASPGGCINGGGLINNEQ 441
>gi|157364204|ref|YP_001470971.1| hydrogenase, Fe-only [Thermotoga lettingae TMO]
gi|157314808|gb|ABV33907.1| hydrogenase, Fe-only [Thermotoga lettingae TMO]
Length = 583
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 200/405 (49%), Gaps = 36/405 (8%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+AC C IT+ S+ V KV+ E H K +V+ A ++LG
Sbjct: 189 TDCIACGQCSAFCPVGAITENSN--VRKVLEELERHD-------KVLVVQTAPATRVALG 239
Query: 130 AKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F L + K+ ++LG D V D A +++E +EFL+R +GG P+FTS
Sbjct: 240 EEFGLEPGSISTGKMVAALRKLGFDYVFDTNFAADLTIMEEGSEFLERLKNGGPFPMFTS 299
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV AEK + +F L +S KSP Q++G L+KT+ A+K G+ P +I V++MPC
Sbjct: 300 CCPAWVNMAEKLYPQF-LKNLSSAKSPHQMLGPLVKTYFAKKKGIDPENILVVSIMPCTA 358
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLA-NELATTTLQEEKDGILDWPWDEHNP 306
KK + R G VD V+T EL L+ ++ +L +E+ D P E
Sbjct: 359 KKDDIIRPQHMVN--GMPGVDIVLTTRELGKLIKMKKIPYASLPDEE---YDSPLGESTG 413
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTCGDVT 361
+ G V+ A+R +L G+ P VEF +R D I+EAT
Sbjct: 414 AAAIF-------GVTGGVMEAALRTAYELGLGKPLPKVEFTNVRGFDGIKEATIDFDGKQ 466
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
L+ +A+G N++ L+ K+ + YDF+EIMACP+GC+ GG Q K +
Sbjct: 467 LKVAVAHGGANVRKLLDKITSGEVYYDFVEIMACPAGCIGGGGQ---PKSLDKNVLTRRM 523
Query: 422 ETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E I +S R EN +++ LY+ +L + +L+T+Y
Sbjct: 524 EGIYTIDERSTIRKSHENPSIKKLYEEFLEHPLSHVSHELLHTTY 568
>gi|212696951|ref|ZP_03305079.1| hypothetical protein ANHYDRO_01514 [Anaerococcus hydrogenalis DSM
7454]
gi|212676039|gb|EEB35646.1| hypothetical protein ANHYDRO_01514 [Anaerococcus hydrogenalis DSM
7454]
Length = 577
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 204/406 (50%), Gaps = 28/406 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C C C++ + +T++S+ +EV K++ E+ K +++ +A ++L
Sbjct: 192 TTCTFCGQCLSVCPTGALTEKSNIKEVWKLL-----------ESDKHLIVQVAPAVRVAL 240
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLF 185
G F E V ++ K LG D V D A +++E NEF+ R L G G P+
Sbjct: 241 GEMFGRKPGESVEGEMVTALKNLGFDKVFDTNFAADLTIMEEANEFVKR-LEGKGKLPIL 299
Query: 186 TSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS CPGWV + E+ + I +P S KSP ++ G++ KT+ AEK+G P I V++MP
Sbjct: 300 TSCCPGWVNFMEQQFSDLIDIP--SSCKSPHEMFGAIAKTYYAEKIGKKPEDIKVVSVMP 357
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK EA R + NE GY DVD V+T EL ++ E+ D D P E
Sbjct: 358 CISKKYEAKRDELENE--GYSDVDIVLTTRELGAMIKEAGIDFNKLEKSD--FDNPMGES 413
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLR 363
+ GT SGG + A + E VEF+ LR I++A ++
Sbjct: 414 TGAGDIF--GT-SGGVIEATIRTAYDTITGEELEKVEFEDLRGLKGIKQAKVDINGREIK 470
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKETALELE 422
+ANG N + L++KL+ + + D IE+MACP GC+ GG Q N K++ KE + L
Sbjct: 471 IAVANGLGNTRKLLEKLRNEEIELDAIEVMACPGGCIGGGGQPYHNGKISILKERSKGLY 530
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
I + + +N ++ LY+ +LG +K K +L+TSY PK
Sbjct: 531 QIDENKKLRKSYQNPYIKKLYQEYLGEVGNEKAKELLHTSYKARPK 576
>gi|119610197|gb|EAW89791.1| hCG30379, isoform CRA_a [Homo sapiens]
Length = 261
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 134/245 (54%), Gaps = 10/245 (4%)
Query: 38 RTGAKIRIQDDGAYIQETNGREE--KLKKVEISLTDCLACSGCITSAESVLITQQSHEEV 95
+T + + D + NG + KL +I L+DCLAC C+T+ E V ++QQ+ ++
Sbjct: 16 KTDDQENVSADAPSPAQENGEAKFHKLADAKIFLSDCLACDSCMTAEEGVQLSQQNAKDF 75
Query: 96 MKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLV 155
+V+ N +K K +V+S+ Q + AKF LS +LCGF K LGV V
Sbjct: 76 FRVL---NLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYV 132
Query: 156 LDVGIAHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISR 210
D IA FS++E + EF+ R+ P+ TS CPGWV YAE+ G I ++
Sbjct: 133 FDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAERVLGRPITAHLCT 192
Query: 211 VKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCV 270
KSPQQVMGSL+K + A + + P I+HV + PCYDKKLEA + G R DCV
Sbjct: 193 AKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESLPPALHGSRGADCV 252
Query: 271 ITAVE 275
+T+ E
Sbjct: 253 LTSGE 257
>gi|397689636|ref|YP_006526890.1| Fe-only hydrogenase, catalytic subunit alpha [Melioribacter roseus
P3M]
gi|395811128|gb|AFN73877.1| Fe-only hydrogenase, catalytic subunit alpha [Melioribacter roseus
P3M]
Length = 672
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 197/416 (47%), Gaps = 26/416 (6%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN-TKTIVLSLAIQP 124
E++ DC+ C C + IT + EV KV +E EN K +V +A
Sbjct: 184 ELANVDCVDCGQCARVCPTASITPKY--EVDKVWKEI--------ENPDKVVVAQIAPAV 233
Query: 125 VLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+++G F ++ ++ K +G D V D A +++E NEF+ R
Sbjct: 234 RVAIGELFGFKPGALLTGQIVNALKMIGFDKVFDTSFAADLTVIEEANEFIQRKQEDYKL 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CPGWV + E H E I +S KSPQQ+ GS+ K L E L + ++ V++
Sbjct: 294 PLFTSCCPGWVKFVEYYHPELI-TNLSSCKSPQQMFGSVAKEILPELLNIKKENLAVVSI 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK EA R +F + G ++VD V+T VEL ++ A + LD P
Sbjct: 353 MPCTAKKAEAKRPEFNHG--GIKEVDYVLTTVELAAMIKE--AGIKFENLTPEPLDMPMG 408
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVT 361
+ ++ N SGG + V +A +L + EFK LR D +R A
Sbjct: 409 FKSGAGVIFGN---SGGVSEAVARYAYEKLTGQKLFDFEFKQLRGSDALRTAELELNGTK 465
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
+R I +G +N LI+KLK K YD IE+MACP GC+ G Q + + + A L
Sbjct: 466 IRMAIVSGLKNASELIKKLKNKEAEYDIIEVMACPGGCIAGAGQPYTTESDNKCKRASAL 525
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN----IPKNNIAL 473
L + ++N + LY + LG ++ K +L+T Y+N P+N I L
Sbjct: 526 YESDKTLQLHKSQDNPYVSELYSSLLGEPNSRKAHSLLHTKYYNRRRITPENLIKL 581
>gi|414153008|ref|ZP_11409335.1| Iron hydrogenase 1 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411455390|emb|CCO07237.1| Iron hydrogenase 1 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 658
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 194/408 (47%), Gaps = 27/408 (6%)
Query: 72 CLACSGCITSAESVLITQQSH--EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
C+ C CI +T S +EV IR KT++ +A P +LG
Sbjct: 189 CINCGQCIAVCPCGALTSNSTAIDEVWAAIRNPK----------KTVICQIAPAPRAALG 238
Query: 130 AKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F L V K+ +++G D V D + +E NEFL R + G PLFTS
Sbjct: 239 EEFGLGSVDVTKKIVAALRKIGFDKVFDTVFTADMTTIEEANEFLSRLVKGEKLPLFTSC 298
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CPGWV YAE+ H E +L +S +SPQQ+ GSL+K A++LG+ P ++ V++MPC K
Sbjct: 299 CPGWVKYAEQFHPE-LLNNLSSCRSPQQMFGSLLKKKYAKELGIAPQDMFVVSIMPCTAK 357
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K EA R +F E G DVD V+T VE + A D D P +
Sbjct: 358 KYEAKRPEFMTE--GAYDVDAVLTTVEAARMFRE--AGIIFSSLADSEFDQPMQQATGSG 413
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCPGESPV-VEF-KPLRNPDIREATFTCGDVTLRFCI 366
+L GT +GG +V+ + ++ E V VEF + + N I A G+ L +
Sbjct: 414 VLF--GT-TGGVMESVVRYVAGKMLNAEGRVDVEFTRGMENTKI--AGINVGEHKLTLAV 468
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILC 426
NG + LI+K++ ++ +E+MACP GC+ GG Q A E+ I
Sbjct: 469 VNGLAAAEELIKKIQSGQIEVHAVEVMACPGGCVGGGGQPFVNDQEHRLARAKEIYNIDA 528
Query: 427 DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
L + ++N LE++++ + GG + H L+T Y PK I N
Sbjct: 529 QLELHKAQDNEDLENIFQKYWGGCCNHETHHDLHTHYQ--PKKRIVGN 574
>gi|359414272|ref|ZP_09206737.1| hydrogenase, Fe-only [Clostridium sp. DL-VIII]
gi|357173156|gb|EHJ01331.1| hydrogenase, Fe-only [Clostridium sp. DL-VIII]
Length = 566
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 198/411 (48%), Gaps = 40/411 (9%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++S T+C+ C C T + I +S + N KA N + +V +A
Sbjct: 183 KLSETNCVNCGQCATVCPTGAIIIKSDVK--------NVWKAIFNPKQR-VVAQVAPAVR 233
Query: 126 LSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
++LG +F + + V+ K+ +R+G D + D ++ +++E EFL++ G
Sbjct: 234 VALGEEFGMKFGKNVMGKIVAAMRRVGFDDIYDTSLSADLTVIEESKEFLEKLEIGDNKL 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CP WV Y E H E +LPY+S KSP Q+ GS+IK + EK V +
Sbjct: 294 PLFTSCCPAWVRYVETKHPE-LLPYVSSCKSPMQMFGSVIKEYFKEKDVEEGKETISVAV 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK EASR +F G +DVD VIT EL ++ E+ + E + LD P+
Sbjct: 353 MPCTAKKAEASRDEFIRN--GIQDVDYVITTTELSAMI-KEIGIKFDEMEAES-LDAPFS 408
Query: 303 EHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFT 356
L +G G +GG V+ + + +EF +R + I+ +
Sbjct: 409 --------LYSGAGAIFGVTGGVTEAVIRNVVSDKTSSALNEIEFIGVRGMEGIKVCELS 460
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNEKVASP 414
GD LR IA+G N++ LI+K+ +DFIE+MACP GC+ G Q I E
Sbjct: 461 VGDKNLRIGIASGLNNVETLIEKVGSGEEKFDFIEVMACPGGCICGAGQPFILGEDKIQR 520
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+++ + + +SE EN ++ LYK L ++ K +L+ Y N
Sbjct: 521 ARGLYKVDKV-AQIKRSE--ENPIVKSLYKGLL----RERSKELLHVHYMN 564
>gi|220929645|ref|YP_002506554.1| hydrogenase, Fe-only [Clostridium cellulolyticum H10]
gi|219999973|gb|ACL76574.1| hydrogenase, Fe-only [Clostridium cellulolyticum H10]
Length = 582
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 197/410 (48%), Gaps = 45/410 (10%)
Query: 72 CLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C C CI+ L + ++V + + H +V+ A ++LG
Sbjct: 191 CTMCGQCISVCPVGALREKDDTDKVWSALADKELH----------VVVQTAPAVRVALGE 240
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F L +V K+ LG V D A +++E E L+R +GG P+ TS
Sbjct: 241 EFGLPIGTRVTGKMAAALNHLGFAKVFDTDTAADLTIMEEGTELLNRIKNGGKLPVITSC 300
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGW+ + E ++ EF L +S KSP ++ G+++KT+ AEK+G+ P I+ V++MPC K
Sbjct: 301 SPGWIKFCEHNYPEF-LENLSSCKSPHEMFGAVLKTYYAEKMGIDPKKIFVVSVMPCTAK 359
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K EA R + G DVD VIT EL ++ A +D D P
Sbjct: 360 KFEAQRPEL--SATGLPDVDVVITTRELARMIKE--AGIDFNNLEDMDFDDP-------- 407
Query: 309 MLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTCGDV 360
+ N TG+G G V+ A+R ++ G+S +E+ +R + I+EAT GD+
Sbjct: 408 --MGNATGAGVIFGATGGVMEAALRTVSEIVAGKSFEDIEYTAVRGIEGIKEATVAIGDM 465
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVAS------ 413
++ +ANG N + L+ +K YDF+EIMACP GC+NGG Q I+ V S
Sbjct: 466 KVKAAVANGLGNARKLLDSIKAGEAAYDFVEIMACPGGCVNGGGQPIQPSSVRSWTDLRT 525
Query: 414 PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ A+ E + + KS EN ++ +Y + G + K +L+T Y
Sbjct: 526 ERAKAIYEEDVSLPIRKS--HENPVIKEMYDKYFGEPGSHKAHEILHTHY 573
>gi|170760857|ref|YP_001787172.1| [Fe] hydrogenase [Clostridium botulinum A3 str. Loch Maree]
gi|169407846|gb|ACA56257.1| iron hydrogenase 1 [Clostridium botulinum A3 str. Loch Maree]
Length = 577
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 201/408 (49%), Gaps = 33/408 (8%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA--SSNENTKTIVLSLAIQP 124
I T+C C C++ + +T+ NN K + ++ K +++ A
Sbjct: 191 IKNTNCTFCGQCVSVCPTGALTEV-----------NNTSKVWDALSQKDKIVIVQTAPAI 239
Query: 125 VLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F L V K+ ++LG V D A +++E +EF+ R GG
Sbjct: 240 RAALGEEFGLEPGTTVTGKMVAALRQLGFSKVFDTDFAADLTIMEEASEFIHRLEHGGTL 299
Query: 183 PLFTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS CPGW+ + E + + + +P S KSPQQ+ G++ K++LAEK+ V P I V+
Sbjct: 300 PMLTSCCPGWIKFFEHNFNDLMDIP--SSCKSPQQMFGAIAKSYLAEKMKVDPKDIIVVS 357
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA R + G DVD VI+ EL ++++ + +L+EE+ D P
Sbjct: 358 VMPCLAKKYEAKREEMKRN--GIPDVDIVISTRELAKMIVEAGIDFNSLKEEE---FDNP 412
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
+ ++ GT +GG L A + G VEF +R + IREAT D
Sbjct: 413 LGKSTGASVIF--GT-TGGVMEAALRTAYEWVTKGTLKDVEFIEVRGEEGIREATVNIND 469
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
++ IA+G N + L+ ++ + Y IEIMACPSGC++GG Q + + +
Sbjct: 470 TEVKVAIASGLGNARKLLNDIRNGKSKYHMIEIMACPSGCVDGGGQPYIYGDTNILKKRT 529
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
AL E ++ KS EN ++ LY+ +LG +K +L+T Y
Sbjct: 530 EALYKEDSNKEIRKS--HENPYIKKLYEEYLGKPYGEKAHELLHTKYR 575
>gi|336422696|ref|ZP_08602838.1| hypothetical protein HMPREF0993_02215 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336007595|gb|EGN37618.1| hypothetical protein HMPREF0993_02215 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 580
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 192/406 (47%), Gaps = 33/406 (8%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + + ++ + ++++ I + + K +V+ A L
Sbjct: 190 TSCVSCGQCIAVCPTGALYEKDYTQKILDAIADPD----------KYVVVQTAPSVRAGL 239
Query: 129 GAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F V K+ +R+G D V D A +++E E LDR +GG P+ T
Sbjct: 240 GEEFGYPMGTDVEGKMAAALRRVGFDKVFDTDWAADLTIMEEATELLDRIKNGGVLPMIT 299
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ Y E + + +S KSPQQ+ G+++KT+ AEK G+ P I V++MPC
Sbjct: 300 SCSPGWIKYCEHYFPD-MTENLSTCKSPQQMFGAMLKTYFAEKEGIDPKKIVSVSVMPCT 358
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWPWDEHN 305
KK E R D + G DVD IT EL L+ + T L +EK D P E
Sbjct: 359 AKKFEIGRDD--QDAAGVPDVDIAITTRELARLIRRCGIDFTVLPDEK---FDDPMGEST 413
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRF 364
++ +GG L A+ L E ++F +R ++EAT+ + ++
Sbjct: 414 GAAVIF---GATGGVMEAALRTAVEVLTGEELANLDFTDVRGTQGVKEATYNVAGMDVKV 470
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKET 417
+A+G N + L+ K+K Y FIEIM CP GC+NGG Q +RN V + +
Sbjct: 471 AVASGLGNARTLLNKVKSGEADYQFIEIMGCPGGCVNGGGQPQVSGDVRNFTDVRGIRAS 530
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L + KS EN ++ LY+ +LG + K L+TSY
Sbjct: 531 VLYQNDSAKPIRKS--HENPAIKKLYEEYLGEPGSHKAHETLHTSY 574
>gi|381166630|ref|ZP_09875844.1| Hydrogenases, Fe-only [Phaeospirillum molischianum DSM 120]
gi|380684203|emb|CCG40656.1| Hydrogenases, Fe-only [Phaeospirillum molischianum DSM 120]
Length = 606
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 181/362 (50%), Gaps = 27/362 (7%)
Query: 117 VLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
V A + G +F L V ++ G +RLG D+VLD A ++E E L
Sbjct: 236 VFQFAPAVRVGFGEEFGLPPGTNVEGRIIGALRRLGADIVLDTNFAADVVVMEESAELLG 295
Query: 176 RFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
R P FTS CP W+ +AE+ H +LP +S KSPQQ +G + KT+L E++G+ P+
Sbjct: 296 RLAGKRRPTFTSCCPAWINFAER-HYPDLLPMLSSTKSPQQCLGKIAKTYLPERMGIDPA 354
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
I +++MPC KK E R E G ++D V+T E LL + L+ ++
Sbjct: 355 RIRVISIMPCTAKKDERVRPQL--AENGVSEIDVVLTTREFARLLKRQ--GIDLRSQEPS 410
Query: 296 ILDWPWDEHNPHRMLLVNGTGS-GGYAHNVLSHAIR---QLCPG-ESPVVEFKPLRNPD- 349
+ D P+ M +G G+ G V+ A+R Q+ G E P +E LR D
Sbjct: 411 VFDNPY-------MSAYSGAGAIFGTTGGVMEAAVRTMYQIANGRELPQIELSQLRGFDG 463
Query: 350 IREATFTCGDV--TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
R AT G T++ + +G R ++L + ++ +DFIEIMACP GC++GG +R
Sbjct: 464 ARTATIEVGGTIGTVKVAMCHGLRPTRDLCEAVRAGTADFDFIEIMACPGGCVDGGGNLR 523
Query: 408 NEKVASPKETALELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
++K P AL+ L + +S + N ++ LY+ +L ++K H+L+T Y
Sbjct: 524 SKKAYLPY--ALKRRESLFAIDRSTAVRQSHNNPQVQALYRDFLERPYSEKAHHLLHTYY 581
Query: 464 HN 465
+
Sbjct: 582 TD 583
>gi|373486849|ref|ZP_09577520.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Holophaga
foetida DSM 6591]
gi|372010802|gb|EHP11405.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Holophaga
foetida DSM 6591]
Length = 588
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 184/402 (45%), Gaps = 23/402 (5%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C+ + +Q H E + S + K +V+ +A +LG
Sbjct: 193 CIQCGQCVAVCPTAAFLEQDHTERV-------WQALSMPRDVKHVVVQVAPAIRATLGET 245
Query: 132 FALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSEC 189
F L V KL +RLG D V D ++VE EFL+R G PL TS
Sbjct: 246 FDLPMGTPVTGKLITALRRLGFDTVFDTNFGADLTIVEEATEFLNRVTKGENLPLLTSCS 305
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGWV + EK + E I Y S KSP Q+ +LIK++ AEK G+ P IY V +MPC KK
Sbjct: 306 PGWVSFLEKFYPEMIR-YTSTCKSPMQMTSTLIKSYYAEKKGMDPRDIYVVAIMPCVAKK 364
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRM 309
EA+R + ++ G D V+T EL ++ + DG D P +
Sbjct: 365 FEAARPE-HSLPDGTPYTDAVLTTRELAWMIKS--YGIDFNALPDGEFDRPLGISSGAAD 421
Query: 310 LLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFCIAN 368
+ +GG L A +L E + F+ +R I+EAT GD +R ++N
Sbjct: 422 IF---GATGGVMEAALRTAAVKLTGEELGPLVFEEIRGVTGIKEATLRVGDKDIRIAVSN 478
Query: 369 GFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP--KETALELETILC 426
G N ++++ +K Y +EIMACP GC+ GG Q P ETA L
Sbjct: 479 GLNNAKHVLDAIKSGEKEYHLVEIMACPGGCIMGGGQPYPRADHDPLDPETARTRAKALY 538
Query: 427 DL-AKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
+ A+ + R EN +EHLY +LG S++ +L+T Y
Sbjct: 539 GIDAQKQLRRSHENPAIEHLYAEFLGEPSSELAHKLLHTHYQ 580
>gi|23664246|gb|AAN39277.1| iron hydrogenase precursor [Neocallimastix frontalis]
Length = 389
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 201/394 (51%), Gaps = 39/394 (9%)
Query: 94 EVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHE-QVVAKLCGFFKRLGV 152
EV++V+R+ ++ + K +V S A ++L +F + K+ ++LG
Sbjct: 5 EVIEVLRQLDSKR-------KILVCSTAPAIRVALAEEFNADPDFNFTGKMVAGLRKLGF 57
Query: 153 DLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRV 211
D + D + +++E E ++R +GG P+FTS CPGW+ EKS+ E + +S
Sbjct: 58 DYIFDTNFSADLTIMEEGTELINRLNNGGKFPMFTSCCPGWINMVEKSYPE-LRENLSTC 116
Query: 212 KSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN---EELGYRDVD 268
KSPQQ++G+LIK++ A+KLGV I HV++MPC KK EA R +F + Y D+D
Sbjct: 117 KSPQQMIGALIKSYFAKKLGVSTEDIIHVSVMPCTAKKGEAKRPEFVQKGKDGKNYPDID 176
Query: 269 CVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHA 328
V+T EL L+ +L E D LD P + L G V+ A
Sbjct: 177 YVLTTRELLTLM--KLKKVNPAELADDKLDSPLGISSSAGNLF-------GVTGGVMEAA 227
Query: 329 IR--QLCPG-ESPVV--EFKPLRNPD-IREATFTCG-----DVTLRFCIANGFRNIQNLI 377
+R Q+ G E+P+ E K +R + I+ AT D+ +R + +G NIQ +
Sbjct: 228 VRTAQIITGVENPIPLGELKAVRGLEGIKAATVPLKTKEGKDINVRAAVVSGGANIQKFL 287
Query: 378 QKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR--- 434
+K+K K + +DF+E+M CP GC+NGG Q K A PK +++ + ++ R
Sbjct: 288 EKIKNKEVEFDFVEMMMCPGGCINGGGQ---PKSADPKIVTKKMQRMYTMDEQATLRLSH 344
Query: 435 ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
EN ++ +YK +L + +L+T Y++ K
Sbjct: 345 ENEEVKQIYKEFLIEPNGHLSHELLHTHYNDRSK 378
>gi|118579914|ref|YP_901164.1| hydrogenase, Fe-only [Pelobacter propionicus DSM 2379]
gi|118502624|gb|ABK99106.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Pelobacter propionicus DSM 2379]
Length = 601
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 193/404 (47%), Gaps = 22/404 (5%)
Query: 66 EISLTDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+I +C+ C C I L + EEV K + + + ++ + +AI
Sbjct: 187 KIGEVECVNCGQCTIVCPTGSLCLKPEMEEVWKSLTDKQTYTVAA----IAPAVRVAIGE 242
Query: 125 VLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+ + A A+S Q++A L K LG D V DV A + +E +EFL+R +G P
Sbjct: 243 IFGMEAG-AVSTGQMLAAL----KLLGFDQVYDVSFAADLTTIEEGSEFLERRSAGVRLP 297
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
FTS CP WV Y E H I +S KSP Q+ G+L+K L + + + + V++
Sbjct: 298 HFTSCCPAWVKYVEHFHPHLI-GNLSTCKSPLQMFGALLKDRLPDLVQIPRERVKVVSIT 356
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWD 302
PC KK EA R +F ++ G D+D VIT +EL ++ A + L E D P+
Sbjct: 357 PCTAKKFEAKRPEFTHD--GIPDIDHVITTIELGRMIKAAGIQFNDLSPES---FDMPFG 411
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVT 361
++ N SGG VL + +L ++F +R IREA+F G T
Sbjct: 412 FSTSAGVIFGN---SGGVTEAVLRFTMEKLSNKPLAKLDFVEVRGESGIREASFDIGGST 468
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
+RF I +G +N + LI K+ + YDF+E+MACP GC+NGG Q N + L
Sbjct: 469 IRFAIVHGLKNAKMLITKIAAGKCAYDFVEVMACPQGCINGGGQPVNHVYNYKQLRTRGL 528
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
T +P++N + Y+ +LG K + +L+T Y N
Sbjct: 529 FTAGKMFHLHKPQDNIMVNECYQQYLGDVGGAKAQQLLHTHYKN 572
>gi|153855001|ref|ZP_01996214.1| hypothetical protein DORLON_02220 [Dorea longicatena DSM 13814]
gi|149752498|gb|EDM62429.1| hydrogenase, Fe-only [Dorea longicatena DSM 13814]
Length = 578
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 205/420 (48%), Gaps = 52/420 (12%)
Query: 67 ISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I C C CIT L + E+V I + + K +V +A
Sbjct: 183 IEEASCALCGQCITHCPVGALRARDDTEDVWDAIADPD----------KIVVAQVAPAVR 232
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG--- 181
+ G +F LS E V K+ KR+GVD D + +++E EFL RF +G
Sbjct: 233 TAWGEEFGLSDKEATVGKILDALKRMGVDYAFDTTFSADLTIMEEGTEFLHRFTAGELKE 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGW+ + KS ++ +S KSPQQ+ G+++KT+ AEKLGV P IY V+
Sbjct: 293 RPMFTSCCPGWLRFI-KSQYPHLVRQLSTAKSPQQMFGAVMKTYFAEKLGVSPEKIYTVS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWP 300
+MPC KK E FY E G+ D+D VIT EL ++ + ++ TL +
Sbjct: 352 VMPCVAKKGEKEMELFYQEYAGH-DIDAVITTRELTKMIKSAHISPDTLAD--------- 401
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLR------N 347
D P + +GTG+G G V+ A+R L GE+P + FK +R N
Sbjct: 402 IDSDRP----MQDGTGAGVIFGATGGVMEAALRTAYYLLKGENPPEDAFKAVRSTGFNQN 457
Query: 348 PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
I+EA F +VT+R +G N + L+ ++ + + YDF+E+MACP GC+ GG Q
Sbjct: 458 QGIQEANFQIDNVTVRTAAVSGLGNARALLDRINKGEVHYDFVEVMACPGGCVGGGGQ-- 515
Query: 408 NEKVASPKETALELETILCDLAKSEPR----ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ +E A E L L K+ R EN ++ +Y+ + ++ K +L+T +
Sbjct: 516 --PIHDGRELAYERGQKLYSLDKNAKRRFSHENQDVQKMYEEYFVKPNSPKSHMLLHTEH 573
>gi|424834421|ref|ZP_18259132.1| [Fe] hydrogenase [Clostridium sporogenes PA 3679]
gi|365978767|gb|EHN14836.1| [Fe] hydrogenase [Clostridium sporogenes PA 3679]
Length = 577
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 200/408 (49%), Gaps = 33/408 (8%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA--SSNENTKTIVLSLAIQP 124
I T+C C C++ + +T+ NN K + ++ K +++ A
Sbjct: 191 IKNTNCTFCGQCVSVCPTGALTEV-----------NNTSKVWDALSQKDKVVIVQTAPAI 239
Query: 125 VLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F L V K+ ++LG V D A +++E +EF+ R GG
Sbjct: 240 RAALGEEFGLEPGTAVTGKMVAALRQLGFSKVFDTDFAADLTIMEEASEFIHRLEHGGTL 299
Query: 183 PLFTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS CPGW+ + E + + + +P S KSPQQ+ G++ K++LAEK+ V P I V+
Sbjct: 300 PMLTSCCPGWIKFFEHNFNDLMNIP--SSCKSPQQMFGAIAKSYLAEKMKVDPKDIIVVS 357
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA R + G DVD VI+ EL ++++ + +LQ+E+ D P
Sbjct: 358 VMPCLAKKYEAKREEMKRN--GIPDVDIVISTRELAKMIVEAGIDFNSLQKEE---FDNP 412
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
E ++ GT +GG L A + VEF +R + IREAT D
Sbjct: 413 LGESTGASVIF--GT-TGGVMEAALRTAYEWVTEDTLKDVEFTEVRGEEGIREATVNIKD 469
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
+ ++ IA+G N + L+ ++ + Y IEIMACPSGC++GG Q + + +
Sbjct: 470 IEVKVAIASGLGNARKLLNDIRNGKSKYHMIEIMACPSGCVDGGGQPYIYGDTNILKKRT 529
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
AL E + KS EN ++ LY+ +LG +K +L+T Y
Sbjct: 530 EALYKEDSNKKIRKS--HENPYIKKLYEEYLGKPYGEKAHELLHTKYR 575
>gi|19547863|gb|AAK60409.1| hydrogenase [Neocallimastix frontalis]
Length = 636
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 213/426 (50%), Gaps = 51/426 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
++ T C+ C C IT ++ EV+ V+R + +TK V+ + P +
Sbjct: 227 MNFTKCVECGQCSQVCPVGAITART--EVVDVLR---------HLDTKRKVVVCSTAPAI 275
Query: 127 SLGAKFALSHE---QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+ S E K+ ++LG D + D + +++E E +DR +GG
Sbjct: 276 RVAPAEEFSTEADFDFTGKMVAGLRKLGFDYIFDTNFSADLTIMEEGTELIDRLNNGGKF 335
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CPGW+ EKS+ E + +S KSPQQ++G++IK++ A+KLG+ I HV++
Sbjct: 336 PMFTSCCPGWINMVEKSYPE-LSDNLSSCKSPQQMIGAVIKSYFAKKLGLSTEDIIHVSI 394
Query: 243 MPCYDKKLEASRADFYN---EELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDW 299
MPC KK EA R +F + Y D+D VIT EL LL + E D D
Sbjct: 395 MPCTAKKGEARRPEFVQKGKDGKDYPDIDYVITTRELLTLLKLKKINPA--ELPDDKFDS 452
Query: 300 PWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR--QLCPG-ESPVV--EFKPLRNPD-I 350
P L G+ +G G V+ AIR Q+ G E+P+ E K +R D I
Sbjct: 453 P----------LGIGSSAGNLFGVTGGVMEAAIRTAQVITGVENPIPLGELKAIRGLDGI 502
Query: 351 REA-----TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
+ A T +V++R + +G NIQ ++K+K K L +DFIE+M CP GC+NGG Q
Sbjct: 503 KAANVPLKTKDGKEVSVRAAVVSGGANIQKFLEKIKNKELEFDFIEMMMCPGGCINGGGQ 562
Query: 406 IRNEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTS 462
K A P+ A +++ + +++ R EN + +YK +LG ++ +L+T
Sbjct: 563 ---PKSADPEIVAKKMQRMYTMDDQAKLRLCHENPEIIDVYKNFLGEPNSHLAHELLHTH 619
Query: 463 YHNIPK 468
Y++ K
Sbjct: 620 YNDRSK 625
>gi|429859924|gb|ELA34680.1| nuclear prelamin a recognition factor [Colletotrichum
gloeosporioides Nara gc5]
Length = 441
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 145/272 (53%), Gaps = 52/272 (19%)
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ TS CPGWVCYAEK+H ++LP++SRVKSPQ +MG+L+KT L++KLG+ PS I+H+ +
Sbjct: 64 PILTSSCPGWVCYAEKTH-PYVLPHLSRVKSPQALMGTLLKTTLSKKLGIPPSRIWHLAV 122
Query: 243 MPCYDKKLEASRADFYNE--------ELGYRDVDCVITAVELEVLLANE--------LAT 286
MPC+DKKLEASR + + G RDVDCVIT+ E+ +L + +
Sbjct: 123 MPCFDKKLEASREELTDTVWAGDGKPGRGVRDVDCVITSKEVLMLAESRGFNFFDLPRSN 182
Query: 287 TTLQEEK--DGILD-WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFK 343
LQ D LD + + HR G+ SGG + L Q + P + +
Sbjct: 183 PNLQRATFPDARLDKFLFPRRAAHRSSQAAGS-SGGNLYFTL-----QTVASKHPNSQIQ 236
Query: 344 PL--RNPDIRE--ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKR--------------- 384
+ RN D+ E + GD + GFRNIQNL++KLK R
Sbjct: 237 TIRGRNADVTEYIVASSTGDPIFKAARYYGFRNIQNLVRKLKPARPSRLPGGKAFGAARR 296
Query: 385 -------LPYDFIEIMACPSGCLNGGAQIRNE 409
L Y ++E+MACP GC NGG QI+ +
Sbjct: 297 PNGKPAGLEYAYVEVMACPGGCTNGGGQIKAD 328
>gi|291561268|emb|CBL40067.1| hydrogenases, Fe-only [butyrate-producing bacterium SS3/4]
Length = 577
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 205/423 (48%), Gaps = 47/423 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I DC C CIT ++++ E + EN K +V +A
Sbjct: 183 IREADCALCGQCITHCPVGALSERDDTEKVWEAIENK---------DKIVVAQVAPAVRA 233
Query: 127 SLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG---G 182
+ G + L+ E V K+ KR+GV+ D + +++E EF+ RF SG
Sbjct: 234 AWGEELGLTDEDAPVGKIFDALKRMGVNYAFDTVFSADLTIMEESTEFIKRFTSGELKER 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CPGWV + K+ +++ Y+S KSPQQ+ G+++KT+ AEKLGV P I+ +++
Sbjct: 294 PMFTSCCPGWVRFV-KTQFPYMVNYLSTAKSPQQMFGAVMKTYFAEKLGVSPDQIFALSI 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK E FY E G+ DVD V+T EL ++ + D +++ P D
Sbjct: 353 MPCVAKKGEREMDLFYGEYAGH-DVDAVLTTRELVKMI------RSAHIRPDTLVEIPGD 405
Query: 303 EHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLR------NPD 349
+ GTG+G G V+ A+R GE+P + FK +R N
Sbjct: 406 SP------MHAGTGAGVIFGATGGVMEAALRTAYFALKGENPPADAFKAVRSGGFQENAG 459
Query: 350 IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI--R 407
++EA F GD+ L +G N + L+Q+++R + YDF+E+MACP GC+ GG Q
Sbjct: 460 VQEAEFANGDIKLHTAAVSGLGNTRRLLQQIERGEVHYDFVEVMACPGGCVGGGGQPIHD 519
Query: 408 NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
E++A + L D+ S EN + +Y + G + K +L+T +
Sbjct: 520 GEELAFARGRKLYALDAKADIRYS--HENPDIREIYSDFFGKPMSHKAHMLLHTEHW--- 574
Query: 468 KNN 470
KNN
Sbjct: 575 KNN 577
>gi|167761227|ref|ZP_02433354.1| hypothetical protein CLOSCI_03632 [Clostridium scindens ATCC 35704]
gi|167660893|gb|EDS05023.1| hydrogenase, Fe-only [Clostridium scindens ATCC 35704]
Length = 583
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 192/406 (47%), Gaps = 33/406 (8%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + + ++ + ++++ I + + K +V+ A L
Sbjct: 193 TSCVSCGQCIAVCPTGALYEKDYTQKILDAIADPD----------KYVVVQTAPSVRAGL 242
Query: 129 GAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F V K+ +R+G D + D A +++E E LDR +GG P+ T
Sbjct: 243 GEEFGYPMGTDVEGKMAAALRRVGFDKIFDTDWAADLTIMEEATELLDRIKNGGVLPMIT 302
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ Y E + + +S KSPQQ+ G+++KT+ AEK G+ P I V++MPC
Sbjct: 303 SCSPGWIKYCEHYFPD-MTENLSTCKSPQQMFGAMLKTYFAEKEGIDPKKIVSVSVMPCT 361
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWPWDEHN 305
KK E R D + G DVD IT EL L+ + T L +EK D P E
Sbjct: 362 AKKFEIGRDD--QDAAGVPDVDIAITTRELARLIRRCGIDFTVLPDEK---FDDPMGEST 416
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRF 364
++ +GG L A+ L E ++F +R ++EAT+ + ++
Sbjct: 417 GAAVIF---GATGGVMEAALRTAVEVLTGEELANLDFTDVRGTQGVKEATYNVAGMDVKV 473
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRN-EKVASPKET 417
+A+G N + L+ K+K Y FIEIM CP GC+NGG Q +RN V + +
Sbjct: 474 AVASGLGNARTLLNKVKSGEADYKFIEIMGCPGGCVNGGGQPQVSGDVRNFTDVRGIRAS 533
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L + KS EN ++ LY+ +LG + K L+TSY
Sbjct: 534 VLYQNDSAKPIRKS--HENPAIKKLYEEYLGEPGSHKAHETLHTSY 577
>gi|312622464|ref|YP_004024077.1| hydrogenase, fe-only [Caldicellulosiruptor kronotskyensis 2002]
gi|312202931|gb|ADQ46258.1| hydrogenase, Fe-only [Caldicellulosiruptor kronotskyensis 2002]
Length = 579
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 199/415 (47%), Gaps = 37/415 (8%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C C CI + + ++ +++ KA +++N K +V+ A
Sbjct: 185 SLNDVACTMCGQCIQACPVGALREKDSTDIV--------WKALADKN-KYVVVQAAPAVR 235
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F L +V K+ K LG D V D +++E E ++R SGG P
Sbjct: 236 VALGEEFGLPIGTRVTGKMVTALKMLGFDKVFDTDTGADLTIMEEGTELINRIKSGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L TS PGW+ + E EF L +S KSP ++ G+++KT+ A+K+G+ P++++ V++M
Sbjct: 296 LITSCSPGWIKFCEHYFPEF-LDNLSTCKSPHEMFGAILKTYFAQKMGIDPANMFVVSVM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA R + GY DVD V+T EL ++ +E ++ P D
Sbjct: 355 PCTAKKFEAQREELAAS--GYPDVDAVLTTRELARMI---------KEAGIDFVNLP-DS 402
Query: 304 HNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTC 357
H M G G +GG L L VE +R + IREA
Sbjct: 403 HFDDPMGDATGAGVIFGTTGGVMEAALRTVYEVLTGKTLENVEITQVRGLEGIREAEIDV 462
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKE 416
G + ++ +A+G N + L++ +K Y FIEIMACP GC+ GG Q I KV +
Sbjct: 463 GTMKIKAAVAHGLANAKKLLEMVKNGEKEYHFIEIMACPGGCIMGGGQPIVPAKVKEKVD 522
Query: 417 TALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
A + D +S P EN ++ LY+ +L +++K H+L+T Y P
Sbjct: 523 VAKLRARAIYDEDRSLPIRKSHENPAVKRLYEEFLDHPNSEKAHHILHTHYKKRP 577
>gi|358338161|dbj|GAA31803.2| cytosolic Fe-S cluster assembly factor NARFL [Clonorchis sinensis]
Length = 498
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 153/490 (31%), Positives = 219/490 (44%), Gaps = 143/490 (29%)
Query: 106 KASSNENTKTIVLSLAIQPVLSLGAKF----ALSHEQVVAKL-----------------C 144
KASS++ +TIV+S++ Q ++SL + A +E+ AKL
Sbjct: 20 KASSSK--RTIVVSISPQSIVSLASYLNKNDAGRYEEWKAKLPVDLECLPEAECIERFLV 77
Query: 145 GFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-------PLFTSECPGWVCYAE 197
F+ +GV LVL+ +L E EF+ RF + P+F CPGW+CYAE
Sbjct: 78 QQFRAMGVSLVLNTTWFRDIALSESAAEFIRRFKAADAEPTGAHLPVFCGACPGWICYAE 137
Query: 198 KSH--GEF-------------ILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
K+H GE ILP++S V+SPQQ+ GSL+K ++ S +YHVT+
Sbjct: 138 KTHSGGETSVETTKFVNQSFSILPHLSVVRSPQQIAGSLLK----QRSESRQSSLYHVTI 193
Query: 243 MPCYDKKLEASRADFYNEELGYR--------DVDCVITAVELEVLLANELATTTLQEEKD 294
MPC+DKKLEASR +F + R DVD V+ EL +L + + L+ K
Sbjct: 194 MPCFDKKLEASRVEFASPAHSARHDDPEMVPDVDLVLATNELLEIL-DTIGDEGLRSMK- 251
Query: 295 GILDWPWD------------------EHNPHR--MLLVNGTGSGGYAHNVLSHAIRQL-- 332
G +D D E P R M G+GSGGYA +V + A +L
Sbjct: 252 GPVDVDCDLWQILKGSVNEAVHSHMPEPTPLRTPMYRHAGSGSGGYAVSVFAQAAEELFS 311
Query: 333 --CPGESPV----VEFKPLRNPDIRE-----ATFTCGDVT-------------------- 361
P E P V + L+N D++E ++ C
Sbjct: 312 IHLPAEDPTSDDRVLTRTLQNQDLQELLLFASSQDCATAKHMLSNLPSSRTPYRSLKSVK 371
Query: 362 -----LRFCIANGFRNIQNLIQKLK---RKR------------LPYDFIEIMACPSGCLN 401
L F +ANGFRNIQNL+Q LK + R P+D++E+MACP GC+N
Sbjct: 372 PPACLLAFAVANGFRNIQNLVQSLKNVYKARQCMENQPTRSTCYPFDYVEVMACPGGCIN 431
Query: 402 GGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
GG Q++ E AL T+ +L +P + A++ TD H L+T
Sbjct: 432 GGGQLKGT-----FEQAL---TLYHELPSMQPMSTWIARQI-GAYV--DHTDPEHHSLHT 480
Query: 462 SYHNIPKNNI 471
Y +PK I
Sbjct: 481 QYREVPKIEI 490
>gi|376260107|ref|YP_005146827.1| hydrogenase, Fe-only [Clostridium sp. BNL1100]
gi|373944101|gb|AEY65022.1| hydrogenase, Fe-only [Clostridium sp. BNL1100]
Length = 574
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 195/423 (46%), Gaps = 31/423 (7%)
Query: 49 GAYIQETNGREEKLKKVEISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKA 107
GA++ T EE L E C+ C CI L + E+V K + H
Sbjct: 172 GAHMTVTTAYEEGLASQE-----CINCGQCIKICPVGALQERDDTEKVWKALENPELH-- 224
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSL 166
+V+ A ++LG +F + V K+ +RLG + V D + ++
Sbjct: 225 --------VVVQTAPAVRVALGEEFGFAPGTNVEGKMVTALRRLGFNKVFDTNFSADLTI 276
Query: 167 VELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
+E NE +DR +GG PL TS PGW+ Y E ++ +FI +S KSPQQ+ G++ K++
Sbjct: 277 IEEGNELIDRIKNGGKLPLITSCSPGWIKYCEHNYHDFI-ENLSSCKSPQQMFGAIAKSY 335
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA 285
K V P ++ V++MPC KK EA R + + G +D+D VIT EL ++ A
Sbjct: 336 YPVKADVDPKSVFVVSVMPCTAKKYEADREEMSVD--GLKDIDAVITTRELAKMIRQ--A 391
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPL 345
E ++ D ++ + N +GG L +L +E+ +
Sbjct: 392 GIKFAELENSKQDSILGTYSGAGTIFGN---TGGVMEAALRTVADKLTGKSLDCIEYTAV 448
Query: 346 RNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
R D I+EAT D+ ++ +ANG N L+ K++ Y FIE+M C GC+NGG
Sbjct: 449 RGLDGIKEATVNIADMEIKVAVANGTGNASKLLDKIRAGEANYHFIEVMGCEGGCINGGG 508
Query: 405 Q--IRNEKVASPKETAL--ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
Q I+++ +TA L I K + EN ++ LY +LG K +L+
Sbjct: 509 QPIIKDKSTTDAVKTARIKGLYDIDASCEKRKSHENPEIQKLYSEYLGEAGGHKAHKLLH 568
Query: 461 TSY 463
T Y
Sbjct: 569 THY 571
>gi|225572307|ref|ZP_03781171.1| hypothetical protein RUMHYD_00601 [Blautia hydrogenotrophica DSM
10507]
gi|225040189|gb|EEG50435.1| hydrogenase, Fe-only [Blautia hydrogenotrophica DSM 10507]
Length = 587
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 207/426 (48%), Gaps = 40/426 (9%)
Query: 53 QETNGREEKLKK-VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNE 111
+ET R KK V +S T C+ C C+ +T++ + + K I A+ ++
Sbjct: 183 EETGERYVNTKKDVNLSATACINCGQCVKVCPVAALTEK--DSIHKAI-------AALDD 233
Query: 112 NTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLG-----VDLVLDVGIAHCFS 165
T+V +A +LG +F L V K+ K+LG D DV +
Sbjct: 234 PNTTVVWQMAPAIQNTLGEEFCLPPGTDVTKKISAAMKQLGGYAFTTDFSADV------T 287
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E EF+ R GG P+ TS CPGWV Y E H L ++S KSPQQ+ G+L+K
Sbjct: 288 IMEEGTEFIQRVTKGGVLPMMTSCCPGWVKYME-YHYPDQLDHLSTCKSPQQMFGALVKN 346
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA-NE 283
+L EK+GV +I +++MPC KK E R + +E RDVD V+T E L
Sbjct: 347 YLPEKIGVPAENICQISIMPCVAKKFERDRTEMESEN--GRDVDIVLTTREAAKLFKLRG 404
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFK 343
+ +QEE+ D+ + R+ GT +GG L + +L G+ ++++
Sbjct: 405 INLAAIQEEE--FDDFMGEGSGAGRIF---GT-TGGVMEAALRTVVWKLTGGKIDQIDYQ 458
Query: 344 PLRN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNG 402
R ++EA+ GD+ ++ I NG N++ +++ ++ + PY FIE+MACP GCLNG
Sbjct: 459 EARGYKGLKEASVKIGDLEVKIAIVNGIGNVKPVMEDIRAGKSPYHFIEVMACPGGCLNG 518
Query: 403 GAQIRNEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHML 459
G ASP A ++ + S R EN ++ LY+ +L H+L
Sbjct: 519 GGA---PLTASPDMIARRMDQMYESDKNSAIRRSHENKEVQKLYEEYLKEPCGHISHHLL 575
Query: 460 NTSYHN 465
+T+Y +
Sbjct: 576 HTAYMD 581
>gi|400602779|gb|EJP70377.1| iron only hydrogenase large subunit domain-containing protein
[Beauveria bassiana ARSEF 2860]
Length = 614
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 142/277 (51%), Gaps = 56/277 (20%)
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ S CPGWVCYAEK+H +LP++SRVKSPQ +MG+L+KT L++ LG+ PS I+H+ +
Sbjct: 234 PILASSCPGWVCYAEKTH-PHVLPHLSRVKSPQALMGTLLKTSLSKALGIPPSRIWHLAV 292
Query: 243 MPCYDKKLEASRADFYNEEL--------GYRDVDCVITAVELEVLLANE-LATTTLQEEK 293
MPC+DKKLEASR + +E G RDVDCVIT+ E+ +L + L L +E
Sbjct: 293 MPCFDKKLEASREELTDEVWARSGRPGRGVRDVDCVITSKEVLMLAESRGLDFFKLSQEP 352
Query: 294 DGILDWPWDEHNPHRMLL-------------------VNGTGSGGYAHNVLSHAIRQLCP 334
P+ + H+ L + SGG +++L Q P
Sbjct: 353 PRPAMAPFPDPTLHKFLFRQDAQLPSPSSSVSVPNTPLAAGSSGGLLYHILQSRAAQ-TP 411
Query: 335 GESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKR--------- 384
G ++ RN D+ E + G+ + GFRNIQNL+++LK R
Sbjct: 412 GSE--IQIIKGRNADVVEYVVSVQGEAVFKAARYYGFRNIQNLVRRLKPARPSRMPGGKP 469
Query: 385 --------------LPYDFIEIMACPSGCLNGGAQIR 407
L Y ++E+MACP GC NGG QI+
Sbjct: 470 FGSARRPTGGKSATLEYSYVEVMACPGGCTNGGGQIK 506
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKK- 64
S +L DL+DFI P CIKPI E + I + + R +
Sbjct: 1 MSAILSTDDLNDFIAPGVACIKPI--ETLPSAPAPPPPSSSSEAQVILDGDSRSASALQP 58
Query: 65 ----VEISLTDCLACSGCITSAESVLITQQSHEEVMKVI 99
EISLTDCLACSGC+TSAE+VL++ QSH EV+ +
Sbjct: 59 PPPPAEISLTDCLACSGCVTSAEAVLVSLQSHAEVLSTL 97
>gi|167768515|ref|ZP_02440568.1| hypothetical protein CLOSS21_03074 [Clostridium sp. SS2/1]
gi|167710039|gb|EDS20618.1| hydrogenase, Fe-only [Clostridium sp. SS2/1]
gi|291560482|emb|CBL39282.1| hydrogenases, Fe-only [butyrate-producing bacterium SSC/2]
Length = 570
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 212/414 (51%), Gaps = 47/414 (11%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I DC C CIT + + + R++ + E+ TIV++ I P
Sbjct: 182 DIKTADCALCGQCITHCPTGALRE----------RDDTDKLYRALEDKDTIVVA-QIAPA 230
Query: 126 L--SLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG- 181
+ + G LS E+ V K+ +R+GVD V D + +++E EF++RF +G
Sbjct: 231 VRAAWGESLGLSREEATVEKIVDALRRIGVDYVFDTTFSADLTIMEEGTEFVERFTNGDL 290
Query: 182 --GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
P+FTS CPGWV + + + + + +S KSPQ++ G+++KT A+K+ + P I+
Sbjct: 291 DMYPMFTSCCPGWVRFIKSQYPQMV-NRLSSAKSPQEMFGAVMKTAFAKKMNIDPDRIFA 349
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILD 298
+++MPC KK E + F+ E G+ VDCV+T EL+ L+ A+ + TL KD D
Sbjct: 350 LSIMPCVAKKDEREKPLFHGEFAGH-GVDCVLTTRELDRLIRADHIDPKTL---KDAAFD 405
Query: 299 WPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPDIR 351
P+ E GTG+G G V+ A+R L G++P V+ FK +R +
Sbjct: 406 TPFTE----------GTGAGVIFGATGGVMEAALRSAYYLITGKNPEVDAFKQIRGVNKN 455
Query: 352 ---EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
EA F T+ + +G +N +NL++ ++++ + Y F+E+MACP GC+ GG Q +
Sbjct: 456 GWTEAQFEIAGNTINIAVVSGLQNTRNLMEAIQKREVHYHFVEVMACPGGCVGGGGQPIH 515
Query: 409 E--KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
E ++AS + + L L S EN ++HLY + G + K +L+
Sbjct: 516 EGKELASDRGSNLYFLDKTAHLRFSH--ENPDIKHLYDEYFGSPGSHKAHQLLH 567
>gi|222529290|ref|YP_002573172.1| hydrogenase, Fe-only [Caldicellulosiruptor bescii DSM 6725]
gi|222456137|gb|ACM60399.1| hydrogenase, Fe-only [Caldicellulosiruptor bescii DSM 6725]
Length = 579
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 200/415 (48%), Gaps = 37/415 (8%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C C CI + + ++ +++ KA +++N K +V+ A
Sbjct: 185 SLNDVACTMCGQCIQACPVGALREKDSTDIV--------WKALADKN-KYVVVQAAPAVR 235
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F L +V K+ K LG D V D +++E E ++R +GG P
Sbjct: 236 VALGEEFGLPIGTRVTGKMVTALKMLGFDKVFDTDTGADLTIMEEGTELINRIKNGGKLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L TS PGW+ + E EF L +S KSP ++ G+++KT+ A+K+G+ P++++ V++M
Sbjct: 296 LITSCSPGWIKFCEHYFPEF-LDNLSTCKSPHEMFGAILKTYFAQKMGIDPANMFVVSVM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA R + GY DVD V+T EL ++ +E ++ P D
Sbjct: 355 PCTAKKFEAQREELAAS--GYPDVDAVLTTRELARMI---------KEAGIDFVNLP-DS 402
Query: 304 HNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTC 357
H M G G +GG L L VE +R + IREA
Sbjct: 403 HFDDPMGDATGAGVIFGTTGGVMEAALRTVYEVLTGKTLENVEITQVRGLEGIREAEIDV 462
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKE 416
G + ++ +A+G N + L++ +K Y FIEIMACP GC+ GG Q I KV +
Sbjct: 463 GTMKIKAAVAHGLANAKKLLEMVKNGEKEYHFIEIMACPGGCIMGGGQPIVPAKVKEKVD 522
Query: 417 TALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
A + + D +S P EN ++ LY+ +L +++K H+L+T Y P
Sbjct: 523 VAKLRASAIYDEDRSLPIRKSHENPAVKRLYEEFLDHPNSEKAHHILHTHYKKRP 577
>gi|317498714|ref|ZP_07957005.1| iron only hydrogenase large subunit domain-containing protein
[Lachnospiraceae bacterium 5_1_63FAA]
gi|316894008|gb|EFV16199.1| iron only hydrogenase large subunit domain-containing protein
[Lachnospiraceae bacterium 5_1_63FAA]
Length = 570
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 211/414 (50%), Gaps = 47/414 (11%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I DC C CIT + + + R++ + E+ TIV++ I P
Sbjct: 182 DIKTADCALCGQCITHCPTGALRE----------RDDTDKLYRALEDKDTIVVA-QIAPA 230
Query: 126 L--SLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG- 181
+ + G LS E+ V K+ +R+GVD V D + +++E EF++RF +G
Sbjct: 231 VRAAWGESLGLSREEATVEKIVDALRRIGVDYVFDTTFSADLTIMEEGTEFVERFTNGDL 290
Query: 182 --GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
P+FTS CPGWV + + + + + +S KSPQ++ G+++KT A+K+ + P I+
Sbjct: 291 DMYPMFTSCCPGWVRFIKSQYPQMV-NRLSSAKSPQEMFGAVMKTAFAKKMNIDPDRIFA 349
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILD 298
+++MPC KK E + F+ E G+ VDCV+T EL+ L+ A+ + TL KD D
Sbjct: 350 LSIMPCVAKKDEREKTLFHGEFAGH-GVDCVLTTRELDRLIRADHIDPKTL---KDAAFD 405
Query: 299 WPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPDIR 351
P+ E GTG+G G V+ A+R L G++P V+ FK +R +
Sbjct: 406 TPFTE----------GTGAGVIFGATGGVMEAALRSAYYLITGKNPEVDAFKQIRGVNKN 455
Query: 352 ---EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--I 406
EA F T+ + +G +N +NL++ ++++ + Y F+E+MACP GC+ GG Q
Sbjct: 456 GWTEAQFEIAGNTIDIAVVSGLQNTRNLMEAIQKREVHYHFVEVMACPGGCVGGGGQPIY 515
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
+++AS + + L L S EN ++HLY + G + K +L+
Sbjct: 516 EGKELASDRGSNLYFLDKTAHLRFSH--ENPDIKHLYDEYFGSPGSHKAHQLLH 567
>gi|51894427|ref|YP_077118.1| iron hydrogenase [Symbiobacterium thermophilum IAM 14863]
gi|51858116|dbj|BAD42274.1| iron hydrogenase [Symbiobacterium thermophilum IAM 14863]
Length = 456
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 175/337 (51%), Gaps = 30/337 (8%)
Query: 141 AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKS 199
K+ +RLG D V +++E NE ++R GG P+FTS CP WV Y E++
Sbjct: 129 GKMAAALRRLGFDRVYSTDFTADLTIMEEGNELIERVTKGGTLPMFTSCCPAWVKYLEQT 188
Query: 200 HGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN 259
+ E +LP++S KSPQQ+ G+L KT+ A+ V P+ +Y V++MPC K E+ R +
Sbjct: 189 YPE-LLPHLSTCKSPQQMAGALFKTYGAKVDNVDPAKVYSVSVMPCTCKDFESGRPEM-- 245
Query: 260 EELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDW---PWDEHNPHRMLLVNGTG 316
+ GYRDVD VIT EL L+ KD +D+ P +E++ + L G G
Sbjct: 246 KASGYRDVDVVITTRELAHLI------------KDAGIDFNALPEEEYD-RPLGLYTGAG 292
Query: 317 S-----GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIANGF 370
+ GG L A + P ++ K +R + +R AT D+ L+ C+ +G
Sbjct: 293 TIFGATGGVMEAALRTAYEVIAKKPIPELDLKFVRGGEGVRYATVKIEDLELKVCVVSGL 352
Query: 371 RNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ----IRNEKVASPKETALELETILC 426
+N+ +++++K + + F+E+M CP GC++GG Q + ++++ +
Sbjct: 353 KNVAPVLEQVKAGKADFHFMEVMTCPVGCVSGGGQPKALLPSDRLCARMARTESTYRHDA 412
Query: 427 DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L + EN ++ +YK +LG +K H+L+TSY
Sbjct: 413 QLPHRKSNENPDIKKIYKEFLGKPLGEKSHHLLHTSY 449
>gi|71027077|ref|XP_763182.1| Fe-hydrogenase [Theileria parva strain Muguga]
gi|68350135|gb|EAN30899.1| Fe-hydrogenase, putative [Theileria parva]
Length = 664
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 144/594 (24%), Positives = 248/594 (41%), Gaps = 185/594 (31%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPI----------EKPSGPRTGAKIRIQDD--GAYIQ 53
+S ++++ L+D++ P +EC+ P+ +K S T K + +D I
Sbjct: 2 YSNAVKISGLNDYLNPGEECVLPLLKSDNKYEIRLNDKISDSNTQNKSNLPNDLLNNDIY 61
Query: 54 ETNGRE----EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASS 109
+ N +K KK+ + L+DCL+CSGC+TS+E +L+ ++H +V++ ++
Sbjct: 62 KDNKLNVTTVDKNKKITVGLSDCLSCSGCLTSSEEILLKDENHLKVIEKMK--------- 112
Query: 110 NENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVEL 169
N+ V+S++ Q + L + + + E+ + KL F+ LG L+ D+G+A +L +
Sbjct: 113 --NSDFCVISISPQTIFMLSSHYNMKAEKALRKLSYLFRFLGAKLIFDIGLAELLALTQS 170
Query: 170 ENEFL-------------------DRFLSG---------------GGPLFTSECPGWVCY 195
+ EF+ +R ++G P+ TS CPGW Y
Sbjct: 171 KEEFIYKYNNNTVSSTHSSDLDDTNRMVNGINKDLNNQNYKERRFNLPIITSHCPGWTLY 230
Query: 196 AEKSHGEFILPYISRVKSPQQVMGSLIK--THLAEKLG---------------------- 231
AEK+ + +L IS+V S Q + G L+K +H
Sbjct: 231 AEKTLDQDLLNLISKVPSSQVIQGLLVKILSHTINYYNTIYHINYLKLFSSNCFLNSFLT 290
Query: 232 ------------------VHPSHIYHVTLMPCYDKKLEASRADFYNE-----ELGYRD-- 266
+ + +YH++++PCYDKK E R +F + L D
Sbjct: 291 NVNCNSNSENNIINNFKVTNNTKVYHISIVPCYDKKFETIRKEFQFDIKSLFSLYQSDSN 350
Query: 267 ------------------VDCVITAVELEVLLAN-ELATTTLQEE-KDGILDWPWD---- 302
VD +++ ++E +L + L T L+EE D ++++ +
Sbjct: 351 PNTSGDPDDSQALETEPLVDDILSTSDIENILNSLGLKFTQLKEEPPDHLVNFLYYFNKI 410
Query: 303 --------EHN-----------PHRMLLVNGTG----SGGYAHNVLSHAIRQL--CPGES 337
HN H M L+ +G SGG+A + H+ +QL ++
Sbjct: 411 NSIADLNINHNLTLPNYESRDFNHLMKLIRCSGLYSQSGGFAEEIFKHSCKQLFNVDVDN 470
Query: 338 PVVEFKPLRNPDIREATF--TCGDVTLRFCIANGFRNIQNLIQKLKRKR----------- 384
++F N D +E T + +V LRF IA GFRNIQN+I+ LK ++
Sbjct: 471 SNLKFMETINNDFKECTLLDSNNNVLLRFIIAYGFRNIQNIIKLLKSRKNTGDSSGNYYQ 530
Query: 385 -------------LPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETIL 425
D+IE+M+CP GC NG Q ++P L IL
Sbjct: 531 NKSDSSGSSNGSDFVCDYIELMSCPGGCFNGAGQALQSPQSNPDSKKSILLNIL 584
>gi|429762837|ref|ZP_19295210.1| putative ferredoxin hydrogenase [Anaerostipes hadrus DSM 3319]
gi|429180698|gb|EKY21907.1| putative ferredoxin hydrogenase [Anaerostipes hadrus DSM 3319]
Length = 570
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 212/414 (51%), Gaps = 47/414 (11%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I DC C CIT + + + R++ + E+ TIV++ I P
Sbjct: 182 DIKTADCALCGQCITHCPTGALRE----------RDDTDKLYRALEDKDTIVVA-QIAPA 230
Query: 126 L--SLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG- 181
+ + G LS E+ V K+ +R+GVD V D + +++E EF++RF +G
Sbjct: 231 VRAAWGESLGLSREEATVEKIVDALRRIGVDYVFDTTFSADLTIMEEGTEFVERFTNGDL 290
Query: 182 --GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
P+FTS CPGWV + + + + + +S KSPQ++ G+++KT A+K+ + P I+
Sbjct: 291 DMYPMFTSCCPGWVRFIKSQYPQMV-NRLSSAKSPQEMFGAVMKTAFAKKMNIDPDRIFA 349
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILD 298
+++MPC KK E + F+ E G+ VDCV+T EL+ L+ A+ + TL KD D
Sbjct: 350 LSIMPCVAKKDEREKPLFHGEFAGH-GVDCVLTTRELDRLIRADHIDPKTL---KDAAFD 405
Query: 299 WPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPDIR 351
P+ E GTG+G G V+ A+R L G++P V+ FK +R +
Sbjct: 406 TPFTE----------GTGAGVIFGATGGVMEAALRSAYYLITGKNPEVDAFKQIRGVNKN 455
Query: 352 ---EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
EA F T+ + +G +N +NL++ ++++ + Y F+E+MACP GC+ GG Q +
Sbjct: 456 GWTEAKFEIAGNTIDIAVVSGLQNTRNLMEAIQKREVHYHFVEVMACPGGCVGGGGQPIH 515
Query: 409 E--KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
E ++AS + + L L S EN ++HLY + G + K +L+
Sbjct: 516 EGKELASDRGSNLYFLDKTAHLRFSH--ENPDIKHLYDEYFGSPGSHKAHQLLH 567
>gi|251778554|ref|ZP_04821474.1| hydrogenase-1 [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243082869|gb|EES48759.1| hydrogenase-1 [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 576
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 190/406 (46%), Gaps = 33/406 (8%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+CL C C+ + ++++SH E V + + N H +++++A ++
Sbjct: 189 TNCLLCGQCVAACPVDALSEKSHTERVQNALEDPNKH----------VIVAMAPSVRAAM 238
Query: 129 GAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + + V K+ + LG + + D+ +++E E + R GG P+FT
Sbjct: 239 GEAFKMGYGVDVTGKIYTALRMLGFNKIFDINFGADMTIMEEATELISRVNEGGPFPMFT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV E EFI +S KSPQQ+ G+ KT+ E G+ P ++ VT+MPC
Sbjct: 299 SCCPSWVREVENYFPEFI-DNLSSAKSPQQIFGAASKTYYPEIEGLDPKDVFTVTIMPCT 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA R + N G R++D VIT EL ++ + A +D D E+
Sbjct: 358 SKKFEADREEMENN--GLRNIDAVITTRELAKMI--KTAKINFSTLEDSEADPSMGEYTG 413
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
+ +GG L A + +E++ +R + I+EAT T G
Sbjct: 414 AGAIF---GATGGVMEAALRSAKDFIENKSLEEIEYEQVRGLEGIKEATVTLGGQEYNIA 470
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETIL 425
+ NG N+ + ++ ++ + Y FIE+M+CP GC+NGG Q V S + +++ T+
Sbjct: 471 VINGAANVFDFVKSVRMEEKQYHFIEVMSCPGGCVNGGGQ---PHVNSKDRSKIDIRTVR 527
Query: 426 CD--------LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L+K + ENA+L +Y+ ++G +L+ Y
Sbjct: 528 ASVLYNQDKGLSKRKSHENASLLKMYETYMGKPGKGLAHELLHIKY 573
>gi|220929867|ref|YP_002506776.1| hydrogenase, Fe-only [Clostridium cellulolyticum H10]
gi|220000195|gb|ACL76796.1| hydrogenase, Fe-only [Clostridium cellulolyticum H10]
Length = 574
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 194/423 (45%), Gaps = 31/423 (7%)
Query: 49 GAYIQETNGREEKLKKVEISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKA 107
GA + T EE L E C+ C CI L + E+V K + + H
Sbjct: 172 GANMTVTTAYEEGLASQE-----CINCGQCIKICPVGALQERDDTEKVWKALENPDLH-- 224
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSL 166
+V+ A ++LG +F + V K+ +RLG D V D + ++
Sbjct: 225 --------VVVQTAPAVRVALGEEFGFAPGTNVEGKMVAALRRLGFDKVFDTNFSADLTI 276
Query: 167 VELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
+E NE ++R +GG PL TS PGW+ Y E ++ +FI +S KSPQQ+ G++ K++
Sbjct: 277 IEEGNELINRIQNGGKLPLITSCSPGWIKYCEHNYHDFI-ENLSSCKSPQQMFGAIAKSY 335
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA 285
K V P ++ V++MPC KK EA R + + G +D+D VIT EL ++ A
Sbjct: 336 YPTKADVDPRKVFVVSVMPCTAKKYEADREEMSVD--GLKDIDAVITTRELAKMIRQ--A 391
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPL 345
+E +D D ++ + N +GG L +L +E+ +
Sbjct: 392 GIKFEELEDSKQDSILGTYSGAGTIFGN---TGGVMEAALRTVADKLTGKSLDCIEYTAV 448
Query: 346 RNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
R D I+EAT + ++ +ANG N L+ K++ Y FIE+M C GC+NGG
Sbjct: 449 RGLDGIKEATVNVAGMEIKVAVANGTGNASKLLDKIRAGEANYHFIEVMGCEGGCINGGG 508
Query: 405 Q--IRNEKVASPKETAL--ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
Q I+++ + A L I K + EN ++ LY +LG K +L+
Sbjct: 509 QPIIKDKSTTDDVKAARIKGLYNIDVSCEKRKSHENPKIQKLYAEYLGEAGGHKAHKLLH 568
Query: 461 TSY 463
T Y
Sbjct: 569 THY 571
>gi|326201392|ref|ZP_08191264.1| hydrogenase, Fe-only [Clostridium papyrosolvens DSM 2782]
gi|325988960|gb|EGD49784.1| hydrogenase, Fe-only [Clostridium papyrosolvens DSM 2782]
Length = 583
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 194/408 (47%), Gaps = 41/408 (10%)
Query: 72 CLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C C CI+ L + E+V + H +V+ A ++LG
Sbjct: 191 CTMCGQCISVCPVGALREKDDTEKVWSALANQELH----------VVVQTAPAVRVALGE 240
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F L +V K+ +G V D A +++E E L+R +GG P+ TS
Sbjct: 241 EFGLPIGTRVTGKMVAALNHMGFAKVFDTDTAADLTIMEEGTELLNRIKNGGKLPVITSC 300
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGW+ + E ++ EF L +S KSP Q+ G+++KT+ AEK+G+ I+ V++MPC K
Sbjct: 301 SPGWIKFCEHNYPEF-LENLSSCKSPHQMFGAVLKTYYAEKMGIDVKKIFVVSVMPCTAK 359
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K EA R + G DVD VIT EL ++ E+KD D P
Sbjct: 360 KFEAQRPEL--SATGLPDVDVVITTRELARMIKESGIDFNNLEDKD--FDDP-------- 407
Query: 309 MLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTCGDV 360
+ N TG+G G V+ A+R ++ G+S +E+ +R + I+EAT GD+
Sbjct: 408 --MGNATGAGVIFGATGGVMEAALRTVSEIVAGKSFDDIEYAAVRGIEGIKEATVAIGDM 465
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKETAL 419
++ +ANG + + L+ +K YDF+EIMACP GC+NGG Q I+ V S +
Sbjct: 466 KVKAAVANGLGSARKLLDSIKAGEASYDFVEIMACPGGCVNGGGQPIQPSSVRSWTDLRA 525
Query: 420 ELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E + + S P EN ++ +Y + G + K +L+T Y
Sbjct: 526 ERAKAIYEEDASLPIRKSHENPVIKEMYDKYFGKPGSHKAHEVLHTHY 573
>gi|226941246|ref|YP_002796320.1| HydC [Laribacter hongkongensis HLHK9]
gi|226716173|gb|ACO75311.1| HydC [Laribacter hongkongensis HLHK9]
Length = 599
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 193/422 (45%), Gaps = 37/422 (8%)
Query: 70 TDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL-- 126
+DC++C C+ + L + VM + + + IV I P +
Sbjct: 194 SDCVSCGQCVMVCPTGALAERDETRTVMDYLVDPD------------IVTVFQIAPAIRV 241
Query: 127 SLGAKFALS-----HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
LG F L QVVA L + +G D++LD A ++E +E L R
Sbjct: 242 GLGEAFGLPPGTNVEGQVVAAL----RAIGADVILDTNFAADLVIMEEGHEVLGRVRQHE 297
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
G FTS CPGWV YAEK H + ILP +S +SPQ +GSL K+ L ++G+ P+ + V+
Sbjct: 298 GTTFTSCCPGWVDYAEKHHPD-ILPMMSSTRSPQACLGSLAKSWLPTRMGIDPARVRVVS 356
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA+R G DVD V+T E LL E E D
Sbjct: 357 VMPCTAKKQEAARPQLGRN--GVPDVDVVLTIREFARLLRRE-GVDLAALEPSAFDDPLM 413
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR-NPDIREATFTC-GD 359
E++ + G A L +A+ Q GE ++ + +R N +REAT GD
Sbjct: 414 SEYSGAGAIFGASGGVMEAAIRTLYYAVNQRELGE---IDVQAVRGNESVREATIEVGGD 470
Query: 360 V-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK--VASPKE 416
V TLR I +G R + + + + YDFIE+MACP GC++GG +R+ K + E
Sbjct: 471 VGTLRVAIVHGLRAAGQMAKAVLAGKARYDFIEVMACPGGCIDGGGHLRHNKRYLKHAGE 530
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI-PKNNIALNV 475
L I A + N + LY+ +LG + +L+T YH+ PK L
Sbjct: 531 RRAGLFAIDRARAVRQSHRNQQVRRLYEDFLGEPLSHVAHDLLHTHYHSREPKAEFCLTQ 590
Query: 476 KW 477
W
Sbjct: 591 LW 592
>gi|442804403|ref|YP_007372552.1| Fe only hydrogenase 1 [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740253|gb|AGC67942.1| Fe only hydrogenase 1 [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 587
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 198/407 (48%), Gaps = 32/407 (7%)
Query: 70 TDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C+ C CI L + S E+V + + H +V+ A +++
Sbjct: 189 TPCVNCGQCINVCPVGALREKSSIEKVWDALANPDLH----------VVVQTAPAVRVAI 238
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F L + K+ KRLG D V D +++E NE + R +GG P+ T
Sbjct: 239 GEEFGLPIGTRCTGKMVAALKRLGFDKVFDTDTGADLTIMEEGNELIQRIKNGGKLPMIT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ + E ++ + +L +S KSPQ + G+L+K++ AEK+G+ PS I+ V++MPC
Sbjct: 299 SCSPGWIKFCEHNYPD-LLDNLSTCKSPQNMFGALLKSYYAEKMGIDPSKIFVVSVMPCT 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R + + GY DVD IT EL ++ A D D P E +
Sbjct: 358 AKKFEIQRPELAS--TGYPDVDVSITTRELARMIKE--AGIDFVNLPDEEFDDPMGEASG 413
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD-VTLRF 364
++ +GG L + +L ++ +E+K +R + I+ A T D +T+R
Sbjct: 414 AGVIF---GATGGVMEAALRTVVDKLTGRDNDNIEYKEVRGEEGIKVAEVTLPDGMTIRA 470
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNE-KVASPKET 417
+A+G N + L+ +++ Y FIEIMACP GC+NGG Q +RN + + +
Sbjct: 471 AVAHGLGNARKLLDQVRNGEAQYHFIEIMACPGGCVNGGGQPIQPARVRNTIDIRTERAK 530
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
L E + KS +N ++ +Y+ +LG + K +L+T Y+
Sbjct: 531 GLYSEDEAMTIRKSH--KNPRIQKIYEEFLGEPGSHKAHELLHTHYY 575
>gi|339501342|ref|YP_004699377.1| hydrogenase, Fe-only [Spirochaeta caldaria DSM 7334]
gi|338835691|gb|AEJ20869.1| hydrogenase, Fe-only [Spirochaeta caldaria DSM 7334]
Length = 581
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 196/438 (44%), Gaps = 59/438 (13%)
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT 115
+GR V + + C+ C C +H V + ++ K + K
Sbjct: 173 SGRIASAADVPLGESPCIKCGQC-----------SAHCPVGAIYERDDTRKVWAALQNKD 221
Query: 116 IVLSLAIQPVL--SLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFSLVELENE 172
I + I P + +LG +F L ++ K + +RLG V D A +++E E
Sbjct: 222 IHPVVQIAPAVRVALGEEFGLEPGTIITKKIYAALRRLGFKTVFDTNFAADLTIMEEGTE 281
Query: 173 FLDRFLSGGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
+ R G G PL TS CP WV Y EK + E I P+ S KSPQQ+MG++IK + A+K
Sbjct: 282 LVKRLTEGKGDIPLITSCCPAWVDYLEKYYPEMI-PHFSTAKSPQQMMGAMIKAYWAQKA 340
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQ 290
GV P+ ++ V++MPC KK E R D GY+DVD IT EL + ++
Sbjct: 341 GVDPAKVFSVSIMPCTAKKWEIDRNDDMKSS-GYQDVDVSITTRELARM---------IK 390
Query: 291 EEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPL 345
+ IL+ P DE + G G +GG + A + E V F P
Sbjct: 391 QAGIDILNLP-DEEADSPLGPYTGAGTIFGATGGVMEAAVRTAYFLVTKKEMGDVNFIPA 449
Query: 346 RN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKR-----KRLPYDFIEIMACPSGC 399
R ++EA +R +A+ NI +++K+K K PY F+E+MAC GC
Sbjct: 450 RGLQGVKEAEVDMNGTKIRIAVAHQMGNIAAVLEKIKEAKAAGKETPYHFVEVMACRGGC 509
Query: 400 LNGGAQ-------IRNEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGG 449
+ GG Q +R++++A I D KS R +N ++ +Y +LG
Sbjct: 510 IAGGGQPYGCTDEVRSKRIAG----------IYADDEKSTYRCSHQNPFIKQVYDEFLGE 559
Query: 450 KSTDKGKHMLNTSYHNIP 467
+ K +L+T Y P
Sbjct: 560 PNDHKAHELLHTHYVARP 577
>gi|356555012|ref|XP_003545834.1| PREDICTED: LOW QUALITY PROTEIN: cytosolic Fe-S cluster assembly
factor narfl-like [Glycine max]
Length = 387
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 171/343 (49%), Gaps = 48/343 (13%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
K +++SL+ S+ F +S + KL FFK LGV + + +LVE EF
Sbjct: 46 KAVIVSLSPXLRASIAVHFGISPIRAFKKLTRFFKSLGVKAIFYRSCSKDLTLVESCVEF 105
Query: 174 LDRFLSG----------GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK 223
+ R++ P+ WV YA+K G F+LPYIS VK QQ +G++IK
Sbjct: 106 ITRYMQKHLVDDEKTKLSLPMIALAYLDWVSYAKKQVGSFVLPYISSVKILQQTIGAIIK 165
Query: 224 THLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYR------------DVDCVI 271
++ ++LG+ P +Y V +MPCYDKKLEASR DF + GY+ +VD V+
Sbjct: 166 NYVCQELGLRPKEVYRVIVMPCYDKKLEASRNDFAS-LFGYQVEGHESEINMISEVDLVL 224
Query: 272 TAVE-LEVLLANELATTTLQEEKDGILDWPWDE---HNPHRMLLVNGTGSGGYAHNVL-- 325
E LE++ + E+ +L+ D +L +E + HR GGYA +
Sbjct: 225 RTGEVLELIQSKEVDFKSLETPLDKMLININEEGYIYGVHRSF-------GGYAETIFRC 277
Query: 326 ---SHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKR 382
H RQ+ + FK +RN D T + L+F + G +N+ N++QKLK
Sbjct: 278 AAKKHFGRQI----DDCLTFKNIRNSDF--LTLEASSL-LKFALCYGLQNLVNIVQKLKT 330
Query: 383 KRLPYDFIEIMACPSG--CLNGGAQIRNEKVASPKETALELET 423
+ Y +EIMACPSG CLNGG Q + SP E + LE+
Sbjct: 331 GKCDYHLLEIMACPSGTVCLNGGGQTKPNSGLSPNELSQLLES 373
>gi|374295698|ref|YP_005045889.1| hydrogenase, Fe-only [Clostridium clariflavum DSM 19732]
gi|359825192|gb|AEV67965.1| hydrogenase, Fe-only [Clostridium clariflavum DSM 19732]
Length = 591
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 187/367 (50%), Gaps = 38/367 (10%)
Query: 116 IVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFL 174
+++ A ++LG +F + +V + K LG D V D A +++E E +
Sbjct: 235 VIVQTAPAVRVALGEEFGMPIGSRVTGNMIAALKLLGFDRVFDTDTAADLTIMEEGTEVI 294
Query: 175 DRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
+R +GG P+ TS PGW+ + E + EF L +S KSP ++ G+++K++ AEK G+
Sbjct: 295 NRIKNGGKLPVITSCSPGWIKFCEHYYPEF-LDNLSTCKSPHEMFGAILKSYYAEKEGID 353
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK 293
PS ++ V++MPC KK EA+R + GY DVD V+T EL ++ K
Sbjct: 354 PSKVFVVSIMPCTAKKFEAARPELAAN--GYPDVDVVLTTRELARMI------------K 399
Query: 294 DGILDWP--WDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD- 349
+ +D+ ++EH M +G G G V+ A+R + + ++ +P+ N D
Sbjct: 400 EAGIDFKNVYEEHFDDPMGDASGAGVIFGATGGVMEAALRTV----AEILSGQPIDNVDY 455
Query: 350 --------IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLN 401
I+EA+ GD+TL+ +A+G N + L+ ++K Y F+EIMACP GC+N
Sbjct: 456 EQVRGVEGIKEASVKVGDLTLKAAVAHGLGNARKLLDRIKAGEAEYHFVEIMACPGGCVN 515
Query: 402 GGAQ-IRNEKVASPKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGK 456
GG Q I+ KV S + E + + K P EN ++ LY+ +L + K
Sbjct: 516 GGGQPIQPSKVRSWTDLRTERAKAIYEEDKELPIRKSHENPRIKALYEEYLEQPGSHKAH 575
Query: 457 HMLNTSY 463
+L+T Y
Sbjct: 576 KLLHTHY 582
>gi|256005733|ref|ZP_05430688.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 2360]
gi|281417062|ref|ZP_06248082.1| hydrogenase, Fe-only [Clostridium thermocellum JW20]
gi|385779219|ref|YP_005688384.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 1313]
gi|419722023|ref|ZP_14249174.1| hydrogenase, Fe-only [Clostridium thermocellum AD2]
gi|419725349|ref|ZP_14252395.1| hydrogenase, Fe-only [Clostridium thermocellum YS]
gi|255990306|gb|EEU00433.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 2360]
gi|281408464|gb|EFB38722.1| hydrogenase, Fe-only [Clostridium thermocellum JW20]
gi|316940899|gb|ADU74933.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 1313]
gi|380771251|gb|EIC05125.1| hydrogenase, Fe-only [Clostridium thermocellum YS]
gi|380781956|gb|EIC11603.1| hydrogenase, Fe-only [Clostridium thermocellum AD2]
Length = 582
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 184/364 (50%), Gaps = 30/364 (8%)
Query: 116 IVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFL 174
+V+ A ++LG +F + +V K+ RLG V D A +++E E +
Sbjct: 226 VVVQTAPAVRVALGEEFGMPIGSRVTGKMVAALSRLGFKKVFDTDTAADLTIMEEGTELI 285
Query: 175 DRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
+R +GG PL TS PGW+ + E ++ EF L +S KSP ++ G+++K++ A+K G+
Sbjct: 286 NRIKNGGKLPLITSCSPGWIKFCEHNYPEF-LDNLSSCKSPHEMFGAVLKSYYAQKNGID 344
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK 293
PS ++ V++MPC KK EA R + + GY DVD V+T EL ++ A
Sbjct: 345 PSKVFVVSIMPCTAKKFEAQRPELSS--TGYPDVDVVLTTRELARMIKE--AGIDFNSLP 400
Query: 294 DGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGE-SPVVEFKPLR 346
D D P E +G+G G V+ AIR +L G+ + +E+ +R
Sbjct: 401 DKQFDDPMGE----------ASGAGVIFGATGGVMEAAIRTVGELLSGKPADKIEYTEVR 450
Query: 347 NPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
D I+EA+ TL+ +A+G N + L+ K+K Y FIEIMACP GC+NGG Q
Sbjct: 451 GLDGIKEASIELDGFTLKAAVAHGLGNARKLLDKIKAGEADYHFIEIMACPGGCINGGGQ 510
Query: 406 -IRNEKVASPKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLN 460
I+ V + K+ E + + +S P EN ++ LY+ + G + K +L+
Sbjct: 511 PIQPSSVRNWKDIRCERAKAIYEEDESLPIRKSHENPKIKMLYEEFFGEPGSHKAHELLH 570
Query: 461 TSYH 464
T Y
Sbjct: 571 THYE 574
>gi|260886835|ref|ZP_05898098.1| ferredoxin hydrogenase [Selenomonas sputigena ATCC 35185]
gi|330839361|ref|YP_004413941.1| hydrogenase, Fe-only [Selenomonas sputigena ATCC 35185]
gi|260863434|gb|EEX77934.1| ferredoxin hydrogenase [Selenomonas sputigena ATCC 35185]
gi|329747125|gb|AEC00482.1| hydrogenase, Fe-only [Selenomonas sputigena ATCC 35185]
Length = 586
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 219/451 (48%), Gaps = 47/451 (10%)
Query: 38 RTGAKIRIQDDGAYIQETN--GREEKLKKVE-----ISLTDCLACSGCITSAESVLITQQ 90
+ G IR D I+ N GR +K+ + TDC+ C C + IT++
Sbjct: 154 KCGRCIRACKDVQGIEALNFAGRSDKITVTTAYDSPLEATDCILCGQCSLVCPTGAITEK 213
Query: 91 SH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFK 148
+ V+ +++ H +++ +A +SLG +F L +V ++ K
Sbjct: 214 DDTQRVLDALQDPKKH----------VIVQVAPAVRVSLGDEFHLPPGAIVTGQMVAALK 263
Query: 149 RLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPY 207
RLG D V D +++E +EF+ R +GG P+ TS PGWV Y EK + + +LP+
Sbjct: 264 RLGFDRVFDTNFGADLTIMEEGHEFIHRLENGGTLPMMTSCSPGWVNYVEKHYSD-LLPH 322
Query: 208 ISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDV 267
+S KSP Q+ G++ KT+ ++ G+ I V++MPC KK EA+R + + G++DV
Sbjct: 323 LSTAKSPMQIFGAVAKTYYPKQSGIPVEDIVTVSVMPCTAKKFEAARPEMGRD--GHQDV 380
Query: 268 DCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG-----GYAH 322
D VIT EL L+ T + + D P GT SG G
Sbjct: 381 DIVITTRELAKLI--HYVGITFHDLPEEDFDSPL------------GTCSGAGAIFGTTG 426
Query: 323 NVLSHAIRQL---CPGES-PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLI 377
V+ A+R + G++ P ++F +R D I+EAT G+ +R +A+ +N ++++
Sbjct: 427 GVMEAALRTVYEKATGKTLPSIDFLAVRGMDGIKEATVDLGERKVRVAVAHTLKNAKHIM 486
Query: 378 QKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENA 437
+LK + PYDFIE+MACP GC GG Q N A E L I +L + EN
Sbjct: 487 DELKAGKSPYDFIEVMACPGGCQGGGGQPLNTTNARRVERMKALYEIDKNLPVRKSHENP 546
Query: 438 TLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
+ H+YK +LG K +L+T +H K
Sbjct: 547 EVVHIYKEFLGAPLEGKAHELLHTHFHKAEK 577
>gi|67468408|ref|XP_650242.1| iron hydrogenase [Entamoeba histolytica HM-1:IMSS]
gi|56466837|gb|EAL44855.1| iron hydrogenase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702159|gb|EMD42851.1| iron hydrogenase, putative [Entamoeba histolytica KU27]
Length = 398
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 195/414 (47%), Gaps = 81/414 (19%)
Query: 10 LQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE-----KLKK 64
LQ+ +DD+I + C+ P+ P + AKI + G EE KL K
Sbjct: 7 LQIAGVDDYIQQNLVCVMPLKETPPQEHKGAAKISL----------GGPEEGNELPKLTK 56
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
V + L DCLACSGCITSAE+VLI QQ E K I+E + K ++ ++A +
Sbjct: 57 VTVRLEDCLACSGCITSAETVLIEQQGLPEFRKNIKELSQRKK--------VICTIADEC 108
Query: 125 VLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL 184
+ S+ V ++ K+ GVD + D+ A SL + +EF + L
Sbjct: 109 IASMSVVHNQPFNVVWTRVEKALKKEGVDELRDLSQAQDISLFGIYDEF-KEYQKMNKVL 167
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS CPGWVCY+EK G+++ Y+S+V S + G ++K S IYHV++
Sbjct: 168 LTSTCPGWVCYSEKMQGKWMFEYMSKVASSMTIAGMIMKK--------QNSEIYHVSIQM 219
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDW--PWD 302
C+DKKLEA++ YN +DCV+T E+ D I+DW P +
Sbjct: 220 CFDKKLEATKT--YN---NIHVIDCVLTTSEI-----------------DSIIDWNEPIN 257
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTL 362
E RM G+ +S + + E FK RN D E
Sbjct: 258 EITSTRM--------KGF----ISSPAQYIALMEQKKEPFKVTRNKDFLEND-------- 297
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
IANGFRNIQN+++ +K K FIE+ ACP GC+ GG QI+ SPKE
Sbjct: 298 GIAIANGFRNIQNVVRFVKSK-TKLQFIEVEACPGGCICGGGQIK----CSPKE 346
>gi|488597|gb|AAA85785.1| hydrogenase-1 [Clostridium saccharobutylicum]
Length = 574
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 191/407 (46%), Gaps = 33/407 (8%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+CL C C+ + +T+++H + V + + + N H +++++A S+
Sbjct: 188 TNCLLCGQCVAACPVGALTEKTHVDRVKEALEDPNKH----------VIVAMAPSIRTSM 237
Query: 129 GAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F L + V KL + LG D V D+ +++E EF++R + G P+FT
Sbjct: 238 GELFKLGYGVDVTGKLYASMRALGFDKVFDINFGADMTIMEEATEFIERVKNNGPFPMFT 297
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV E + EF L +S KSPQQ+ G+ KT+ + G+ ++ VT+MPC
Sbjct: 298 SCCPAWVRQVENYYPEF-LENLSSAKSPQQIFGAASKTYYPQISGISAKDVFTVTIMPCT 356
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA R + YNE G +++D V+T EL ++ + A +D D E+
Sbjct: 357 AKKFEADREEMYNE--GIKNIDAVLTTRELAKMIKD--AKINFANLEDEQADPAMGEYTG 412
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFC 365
++ +GG L A + + +E+ +R I+EAT G
Sbjct: 413 AGVIF---GATGGVMEAALRTAKDFVEDKDLTDIEYTQIRGLQGIKEATVEIGGENYNVA 469
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETIL 425
+ NG N+ + K Y FIE+MACP GC+NGG Q V++ + +++ T+
Sbjct: 470 VINGAANLAEFMNSGKILEKNYHFIEVMACPGGCVNGGGQ---PHVSAKEREKVDVRTVR 526
Query: 426 C--------DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
+L K + +N L ++Y ++G K +L+ Y+
Sbjct: 527 ASVLYNQDKNLEKRKSHKNTALLNMYYDYMGAPGQGKAHELLHLKYN 573
>gi|145538267|ref|XP_001454839.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422616|emb|CAK87442.1| unnamed protein product [Paramecium tetraurelia]
Length = 1021
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 180/347 (51%), Gaps = 44/347 (12%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++SL DCLACSGC+T+AE++LI QS +E ++ I+++ + + ++ Q
Sbjct: 668 KVSLQDCLACSGCVTTAETILIQTQSLDEFLQAIKKH-----------QNPAIGISPQSR 716
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPLF 185
SL + ++ + L F+ L V L D+ + + + N + + PL
Sbjct: 717 ASLSHVLNFTDSEMHSILHQLFQELNVKL-YDMSE---YMKIAINNSIQEFKQTKITPLL 772
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
SECPGWVCYAEK+ E I+ ++S+VKSPQQ+ G+++K +H Y T+MPC
Sbjct: 773 CSECPGWVCYAEKTLDESIINHMSKVKSPQQIFGAILKK----------NHDYIATIMPC 822
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
YDKKLEA R + N E D++ V++ E+E + + + + + ++ + +
Sbjct: 823 YDKKLEAVRLE--NNE----DINIVLSTREIEQYIKDYIQKSQITPQQTQLSTMAINFQE 876
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRFC 365
H + S Y ++ +++ P + V+ +N D E T D+ L+
Sbjct: 877 YHNI------SSNNYLDYIIQSSVK---PNWT--VKQNIRKNKDFIEITIYNEDMQLQGI 925
Query: 366 IAN--GFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
A G +NI NLI ++K K Y ++EIMACP GCLNGG QI +K
Sbjct: 926 YARVFGLKNIANLISQIKTKTCKYKYVEIMACPLGCLNGGGQILIQK 972
>gi|407042067|gb|EKE41107.1| iron hydrogenase, putative [Entamoeba nuttalli P19]
Length = 398
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 195/414 (47%), Gaps = 81/414 (19%)
Query: 10 LQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE-----KLKK 64
LQ+ +DD+I + C+ P+ P + AKI + G EE KL K
Sbjct: 7 LQIAGVDDYIQQNLVCVMPLKETPPQEHKGAAKISL----------GGPEEGNELPKLTK 56
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
V + L DCLACSGCITSAE+VLI QQ E K I+E + K ++ ++A +
Sbjct: 57 VTVRLEDCLACSGCITSAETVLIEQQGLPEFRKNIKELSKRKK--------VICTIADEC 108
Query: 125 VLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL 184
+ S+ V ++ K+ GVD + D+ A SL + +EF + L
Sbjct: 109 IASMSVVHNQPFNVVWTRVEKALKKEGVDELRDLSQAQDISLFGIYDEF-KEYQKMNKVL 167
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS CPGWVCY+EK G+++ Y+S+V S + G ++K S IYHV++
Sbjct: 168 LTSTCPGWVCYSEKMQGKWMFEYMSKVASSMTIAGMIMKK--------QNSEIYHVSIQM 219
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDW--PWD 302
C+DKKLEA++ YN +DCV+T E+ D I+DW P +
Sbjct: 220 CFDKKLEATKT--YN---NIHVIDCVLTTSEI-----------------DSIVDWNEPIN 257
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTL 362
E RM G+ +S + + E FK RN D E
Sbjct: 258 EITSTRM--------KGF----ISSPAQYIALMEQKKEPFKVTRNKDFLEND-------- 297
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
IANGFRNIQN+++ +K K FIE+ ACP GC+ GG QI+ SPKE
Sbjct: 298 GIAIANGFRNIQNVVRFVKSK-TKLQFIEVEACPGGCICGGGQIK----CSPKE 346
>gi|402832996|ref|ZP_10881619.1| [FeFe] hydrogenase, group A [Selenomonas sp. CM52]
gi|402281739|gb|EJU30365.1| [FeFe] hydrogenase, group A [Selenomonas sp. CM52]
Length = 586
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 218/451 (48%), Gaps = 47/451 (10%)
Query: 38 RTGAKIRIQDDGAYIQETN--GREEKLKKVE-----ISLTDCLACSGCITSAESVLITQQ 90
+ G IR D I+ N GR +K+ + TDC+ C C + IT++
Sbjct: 154 KCGRCIRACKDVQGIEALNFAGRSDKITVTTAYDSPLEATDCILCGQCSLVCPTGAITEK 213
Query: 91 SH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFK 148
+ V+ +++ H +++ +A +SLG +F L +V ++ K
Sbjct: 214 DDTQRVLDALQDPKKH----------VIVQVAPAVRVSLGDEFHLPPGAIVTGQMVAALK 263
Query: 149 RLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPY 207
RLG D V D +++E +EF+ R GG P+ TS PGWV Y EK + + +LP+
Sbjct: 264 RLGFDRVFDTNFGADLTIMEEGHEFIHRLEHGGTLPMMTSCSPGWVNYVEKHYSD-LLPH 322
Query: 208 ISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDV 267
+S KSP Q+ G++ KT+ ++ G+ I V++MPC KK EA+R + + G++DV
Sbjct: 323 LSTAKSPMQIFGAVAKTYYPKQSGIPVEDIVTVSVMPCTAKKFEAARPEMGRD--GHQDV 380
Query: 268 DCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG-----GYAH 322
D VIT EL L+ T + + D P GT SG G
Sbjct: 381 DIVITTRELAKLI--HYIGITFHDLPEEDFDSPL------------GTCSGAGAIFGTTG 426
Query: 323 NVLSHAIRQL---CPGES-PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLI 377
V+ A+R + G++ P ++F +R D I+EAT G+ +R +A+ +N ++++
Sbjct: 427 GVMEAALRTVYEKATGKTLPSIDFLAVRGMDGIKEATVDLGERKVRVAVAHTLKNAKHIM 486
Query: 378 QKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENA 437
+LK + PYDFIE+MACP GC GG Q N A E L I +L + EN
Sbjct: 487 DELKAGKSPYDFIEVMACPGGCQGGGGQPLNTTNARRAERMKALYEIDKNLPVRKSHENP 546
Query: 438 TLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
+ H+YK +LG K +L+T +H K
Sbjct: 547 EVVHIYKEFLGAPLEGKAHELLHTHFHKAEK 577
>gi|187932889|ref|YP_001884306.1| hydrogenase-1 [Clostridium botulinum B str. Eklund 17B]
gi|187721042|gb|ACD22263.1| hydrogenase-1 [Clostridium botulinum B str. Eklund 17B]
Length = 576
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 189/406 (46%), Gaps = 31/406 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C CI + ++++SH E R NA + S K +++++A ++G
Sbjct: 189 TNCLLCGQCIAACPVDALSEKSHTE-----RVQNALEDPS----KHVIVAMAPSVRAAMG 239
Query: 130 AKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + + V K+ + LG + + D+ +++E E + R GG P+FTS
Sbjct: 240 EAFKMGYGVDVTGKIYTALRMLGFNKIFDINFGADMTIMEEATELISRVNKGGPFPMFTS 299
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV E EFI +S KSPQQ+ G+ KT+ E G+ P ++ VT+MPC
Sbjct: 300 CCPSWVREVENYFPEFI-DNLSSAKSPQQIFGAASKTYYPEIEGLDPKDVFTVTIMPCTS 358
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + N G R++D VIT EL ++ + A +D D E+
Sbjct: 359 KKFEADREEMENN--GLRNIDAVITTRELAKMI--KTAKINFATLEDSEADPSMGEYTGA 414
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
+ +GG L A + +E++ +R D I+EAT T G +
Sbjct: 415 GAIF---GATGGVMEAALRSAKDFIENKSLEEIEYEQVRGLDGIKEATVTLGGQEYNIAV 471
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILC 426
NG N+ + ++ + + Y FIE+M+CP GC+NGG Q V S + +++ T+
Sbjct: 472 INGAANVFDFVKSGRMEEKQYHFIEVMSCPGGCVNGGGQ---PHVNSKDRSKIDIRTVRA 528
Query: 427 D--------LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
L K + EN +L +Y+ ++G +L+ Y+
Sbjct: 529 SVLYNQDKGLVKRKSHENVSLLKMYETYMGKPGKGLAHELLHIKYN 574
>gi|402836885|ref|ZP_10885416.1| [FeFe] hydrogenase, group A [Mogibacterium sp. CM50]
gi|402269901|gb|EJU19170.1| [FeFe] hydrogenase, group A [Mogibacterium sp. CM50]
Length = 584
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 192/403 (47%), Gaps = 27/403 (6%)
Query: 70 TDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHK-ASSNENTKTIVLSLAIQPVLS 127
T C+ C CI S L + S +VM+ I + + + + +T+ + QP+ +
Sbjct: 190 TSCVNCGQCIVSCPVGALYEKDSVTQVMEAIEDPDKYVIVQAAPSTRVAIAECFDQPIGT 249
Query: 128 LGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
+ KL RLG D V D + ++VE NE ++R GG P+ T
Sbjct: 250 ----------EAEGKLSAALHRLGFDRVFDTNFSADLTIVEEANELIERVRGGGVLPMIT 299
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV + E + + I P +S KSPQQ+ G++ K++ AE +G+ I V++MPC
Sbjct: 300 SCSPGWVKFCEHYYPDLI-PNLSTCKSPQQMFGAVTKSYYAEVMGIPADRIVSVSVMPCT 358
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R D + GY+DVD IT EL ++ LA + +D D P E+
Sbjct: 359 AKKHELGRND--QGQDGYQDVDFSITTRELAKMI--RLAGIEFMKLEDEPYDNPLGEYTG 414
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFC 365
++ +GG L A+ +L E ++F +R ++EA + ++
Sbjct: 415 AGVIF---GATGGVMEAALRTAVEKLTGDELINLDFVDVRGVKGVKEAEYDLQGQKVKVA 471
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR-NEKVASPKETALELETI 424
+A+G N + ++ K+K Y FIEIM CP GC+NGG Q + ++ + + E
Sbjct: 472 VASGLANARVILDKVKAGEADYTFIEIMGCPGGCVNGGGQPHVDSQIRNFMDVRAERAKG 531
Query: 425 LCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L L K+ P EN + +Y+ + G ++ H+L+T+Y
Sbjct: 532 LYTLDKNAPIRKSHENPVIVKMYEDYFGVPGGERAHHLLHTTY 574
>gi|366166522|ref|ZP_09466277.1| hydrogenase, Fe-only [Acetivibrio cellulolyticus CD2]
Length = 582
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 187/358 (52%), Gaps = 20/358 (5%)
Query: 116 IVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFL 174
+V+ A ++LG +F + +V + + +RLG V D A +++E E +
Sbjct: 226 VVVQTAPAVRVALGEEFGMPIGSRVTSNMVAALRRLGFSKVFDTDTAADLTIMEEGTEVI 285
Query: 175 DRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
+R +GG P+ TS PGW+ + E ++ EF L +S KSP ++ G+++K++ A+K G+
Sbjct: 286 NRIKNGGKLPVITSCSPGWIKFCEHNYPEF-LENLSTCKSPHEMFGAVLKSYYAQKEGID 344
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEE 292
P+ ++ V++MPC KK EA+R + GY DVD V+T EL ++ + T + EE
Sbjct: 345 PAKVFVVSIMPCTAKKFEAARPEL--AATGYADVDVVLTTRELARMIKEAGIDFTNVSEE 402
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGES-PVVEFKPLRNPD-I 350
D P + + ++ G+ G + ++ G+S VE++ +R + I
Sbjct: 403 H---FDDPMGDASGAGVIF----GATGGVMEAALRTVAEVLSGQSIENVEYEQVRGVEGI 455
Query: 351 REATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNE 409
+EA+ GD+TL+ +A+G N + L+ K+K Y F+EIMACP GC+NGG Q I+
Sbjct: 456 KEASVKVGDLTLKAAVAHGLGNARKLLDKIKAGEADYHFVEIMACPGGCVNGGGQPIQPS 515
Query: 410 KVASPKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
V S + E + + + P EN ++ LY+ +LG K +L+T Y
Sbjct: 516 NVRSWTDLRTERAKAIYEEDRELPIRKSHENPKVKALYEEYLGEPGGHKSHELLHTHY 573
>gi|291544587|emb|CBL17696.1| hydrogenases, Fe-only [Ruminococcus champanellensis 18P13]
Length = 582
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 187/406 (46%), Gaps = 33/406 (8%)
Query: 70 TDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + L + S EV+ I + + H +++ A L
Sbjct: 192 TSCVSCGQCIAVCPTGALAEKDSTSEVLAAIADPSKH----------VIVQTAPAVRAGL 241
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F V K+ +RLG D V D A +++E EF+DR +GG PL T
Sbjct: 242 GECFGYPIGTDVEGKMVAALRRLGFDKVFDTDFAADLTIMEEGTEFIDRLQNGGKLPLIT 301
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ + E + + + +S KSPQQ+ G++ K++ AEK+G+ P + V++MPC
Sbjct: 302 SCSPGWIKFCEHYYPD-MTENLSSCKSPQQMFGAVAKSYYAEKMGIDPKDMVVVSVMPCT 360
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R D G DVD +T EL ++ + A Q D D P
Sbjct: 361 AKKFEIGRDD--QAANGVPDVDIALTTRELGRMI--QRAGINFQALLDEEFDMPLGLSTG 416
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ +GG L + L E P ++F+ +R + I+EAT+ ++
Sbjct: 417 AGVIF---GATGGVMEAALRTVVEVLEKKELPSLDFQEVRGMEGIKEATYNVAGTDVKLA 473
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI------RNEKVASPKETAL 419
+A+G N + L+ K+ Y FIEIM CP GC+NGG Q RN K ++
Sbjct: 474 VASGLANARMLLDKVNSGEADYHFIEIMGCPGGCINGGGQPHVSPAERNFGDYRAKRASV 533
Query: 420 ELETILCDLAKS--EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
D AK+ + ENA ++ LY +L + K +L+T+Y
Sbjct: 534 LYSN---DAAKAVRKSHENAGVKELYDTYLEKPGSHKAHQLLHTTY 576
>gi|268607923|ref|ZP_06141654.1| hydrogenase, Fe-only [Ruminococcus flavefaciens FD-1]
Length = 582
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 201/413 (48%), Gaps = 33/413 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLS- 127
T C++C CI ++++ + +EVM I + E T + + A++ L+
Sbjct: 192 TSCVSCGQCIAVCPVGALSEKDYTKEVMAAI--------ADPEKTVLVQTAPAVRAGLAE 243
Query: 128 -LGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLF 185
G + E K+ +RLG D V D A +++E NEF++R +GG P+
Sbjct: 244 CFGNPIGTNAE---GKMVAALRRLGFDKVFDTDFAADLTIMEEANEFVERVQNGGVLPMI 300
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS PGWV + E + E +LP++S KSPQQ+ G+ KT+ AEK+G+ P +I V++MPC
Sbjct: 301 TSCSPGWVKFCEHYYPE-LLPHLSSCKSPQQMFGATAKTYYAEKMGLDPKNIVMVSIMPC 359
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWDEH 304
KK E R D G DVD +T EL ++ + +L EEK D P
Sbjct: 360 TAKKFEIGRDD--QSAAGVPDVDYALTTRELGRMIERAGILFNSLPEEK---FDDPLGIS 414
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLR 363
++ +GG L A+ L + V + +R + I++AT+ GD+ +
Sbjct: 415 TGAGVIF---GATGGVMEAALRTAVHTLTG--NTVTDLPEVRGTEGIKKATYEVGDLKVN 469
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE-KVASPKETALELE 422
+A+G N + +++ +K FIEIMACP GC+NGG Q + V + + E
Sbjct: 470 VEVASGLSNAREVLESIKNGTCDAQFIEIMACPGGCVNGGGQPQVPMGVRNFVDIRAERA 529
Query: 423 TILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
+L +L KS P EN ++ +Y+ + + K +L+TSY N I
Sbjct: 530 KVLYNLDKSMPLRQSHENPAIKKVYEEFFEKPGSHKAHEVLHTSYVKRKVNEI 582
>gi|160935017|ref|ZP_02082403.1| hypothetical protein CLOLEP_03893 [Clostridium leptum DSM 753]
gi|156866470|gb|EDO59842.1| hydrogenase, Fe-only [Clostridium leptum DSM 753]
Length = 366
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 180/371 (48%), Gaps = 18/371 (4%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFS 165
A+ + K +V+ A +LG +F + V K+ +RLG D V D +
Sbjct: 3 AAIADPKKHVVVQTAPSVRAALGEEFGMPIGTNVEGKMVAALRRLGFDKVFDTDFGADMT 62
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E +EF+DR +GG PL TS PGW+ + E + E +LP +S KSPQQ+ G+LIKT
Sbjct: 63 IMEEAHEFIDRVQNGGVLPLITSCSPGWIKFCEFYYPE-LLPNLSSCKSPQQMQGALIKT 121
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-E 283
AE + P I V++MPC KK E SR D G DVD V+T EL ++
Sbjct: 122 WYAETHNIDPKDIVSVSVMPCTAKKFEISRDD--ENAAGVPDVDVVLTVRELARMIKRAN 179
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFK 343
+ T L +EK D D ++ +GG L A L ++++
Sbjct: 180 IDLTMLPDEK---FDPTMDVSTGAAVIF---GATGGVMEAALRTAADTLTGKSLDSIDYE 233
Query: 344 PLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNG 402
+R D I+EA + + ++ +A+G N +++K+K Y FIEIM CP GC+NG
Sbjct: 234 EVRGTDGIKEAVYNVAGMDVKVAVASGLSNANEILKKVKNGEADYHFIEIMCCPGGCVNG 293
Query: 403 GAQ-IRNEKVASPKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKH 457
G I+ V + + E +L + K+ P +N ++ Y +LG + K
Sbjct: 294 GGMPIQPSSVRNFVDIRKERAKVLYEEDKNLPLRKSHDNPVVKKCYAEYLGEPGSHKAHE 353
Query: 458 MLNTSYHNIPK 468
+L+T+Y PK
Sbjct: 354 ILHTTYTPRPK 364
>gi|154318177|ref|XP_001558407.1| hypothetical protein BC1G_03256 [Botryotinia fuckeliana B05.10]
Length = 542
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 203/479 (42%), Gaps = 124/479 (25%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPI---PIEKPSGPRTGAKIRIQDDGAYIQETNGREEKL 62
S +L DL+DFI P CIKP+ P KPS +I D + L
Sbjct: 1 MSAILSADDLNDFISPGVACIKPVETLPAAKPSADNE-LEISFNTDAPLPSD-------L 52
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNA---HKASSN--------- 110
+ISLTDCLACSGC+TSAE+VL++ QSH EV+ + HK+++
Sbjct: 53 PPAQISLTDCLACSGCVTSAEAVLVSLQSHAEVLSQLDSAPGIRLHKSATGTGVSVEGLE 112
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSH-------EQVVAKLCGFFKRL----GVDLVLDVG 159
+ K V S++ Q S+ A F ++ E +++ G R V+D
Sbjct: 113 QGGKIYVASVSPQSRASIAATFGVTEREAGYMIEHLLSGPKGIKNRAVYRNAFQWVVDTN 172
Query: 160 IAHCFSLVELENEFLDRFLSGG----GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
I LV L E + ++G P+ TS CPGW
Sbjct: 173 ITREACLV-LGAEEVIASMNGTEETKKPILTSSCPGW----------------------- 208
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE------ELGYRDVDC 269
T L+ KLG+ P I+HV +MPC+DKKLEASR + + G RDVD
Sbjct: 209 --------TTLSRKLGISPERIWHVAVMPCFDKKLEASREELTDAVWEGTGTRGVRDVDS 260
Query: 270 VITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVN---------------- 313
VIT+ EL ++LA+ + + K P H P +N
Sbjct: 261 VITSKEL-LMLAD---SRRIDFSKLPRTPLPSSSHIPFPDPTLNSFLFPSNRRSSSNGSR 316
Query: 314 -GTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC--GDVTLRFCIANGF 370
SGG H L H G S V+ RN D+ + T GD+ L+ GF
Sbjct: 317 DAGSSGGNLHYAL-HYFASQHKGSS--VQTIKGRNADVVDYTVVADNGDILLKAARYYGF 373
Query: 371 RNIQNLIQKLK---RKRLP-------------------YDFIEIMACPSGCLNGGAQIR 407
RNIQNL+++LK R+P Y ++E+MACP GC NGG QI+
Sbjct: 374 RNIQNLVRRLKPARPSRMPGGKPIGSARRPNGKATGPDYTYVEVMACPGGCTNGGGQIK 432
>gi|339443430|ref|YP_004709435.1| hypothetical protein CXIVA_23660 [Clostridium sp. SY8519]
gi|338902831|dbj|BAK48333.1| hypothetical protein CXIVA_23660 [Clostridium sp. SY8519]
Length = 583
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 197/411 (47%), Gaps = 33/411 (8%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + + ++ + ++V I + TK +++ A +L
Sbjct: 190 TACVSCGQCIAVCPTGALQEKDNTKDVFDAI----------ADPTKRVIVQTAPAVRAAL 239
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F V K+ +RLG D V D A +++E NE ++R +GG P+ T
Sbjct: 240 GEEFDYPIGTDVEGKMAAALRRLGFDDVFDTDFAADLTIMEEANELIERVTNGGVLPMMT 299
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ Y E + +LP++S K+P + G++ K++ A+K+GV + V++MPC
Sbjct: 300 SCSPGWIKYCEHYFPD-LLPHLSSCKAPHTMFGAIAKSYYADKIGVDKKDLVVVSVMPCT 358
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E +R D + G DVD VIT EL ++ +A ++ D D P
Sbjct: 359 AKKFEITRPD--EDGAGVPDVDIVITTRELARMI--RMAGIQFRDLPDEKFDAPLGLGTG 414
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ +GG L A ++ E P ++FK +R D I+EAT+ ++
Sbjct: 415 AAVIF---GATGGVMEAALRTAYEKITGEELPALDFKEVRGTDGIKEATYDLKGTKMKVA 471
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNE-KVASPKETA 418
+A+ + +L++K++ Y FIE+M CP GC+NGG Q +RN +A + A
Sbjct: 472 VASSTKCAHDLMKKVQSGEADYTFIEVMGCPGGCVNGGGQPQQPGYVRNTVDLAKERAKA 531
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
L C KS EN + LY +LG + +L+T+Y IP+
Sbjct: 532 LYENDRNCTYRKS--HENPAIIQLYDEFLGQPGSHLAHELLHTTY--IPRT 578
>gi|182419999|ref|ZP_02951233.1| hydrogenase-1 [Clostridium butyricum 5521]
gi|237669483|ref|ZP_04529463.1| hydrogenase-1 [Clostridium butyricum E4 str. BoNT E BL5262]
gi|149384911|gb|ABR25256.1| hydrogenase [Clostridium butyricum]
gi|182376036|gb|EDT73623.1| hydrogenase-1 [Clostridium butyricum 5521]
gi|188530086|gb|ACD62594.1| FeFe hydrogenase [Clostridium butyricum]
gi|237654927|gb|EEP52487.1| hydrogenase-1 [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 574
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 198/423 (46%), Gaps = 38/423 (8%)
Query: 57 GREEKLKKVE---ISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNEN 112
G + K++ +E T+CL C C+ + + ++ H + V + + + N H
Sbjct: 172 GPDRKVQAIEGKCFDETNCLLCGQCVAACPVAALNEKPHIDRVKEALEDPNKH------- 224
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
+++++A S+G F + + V KL ++LG D V D+ +++E
Sbjct: 225 ---VIVAMAPAVRTSMGELFKMGYGVDVTGKLYSSLRQLGFDKVFDINFGADMTIMEEAT 281
Query: 172 EFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
EF++R + G P+FTS CP WV AE + E +L +S KSPQQ+ G+ KT+
Sbjct: 282 EFIERINNNGPFPMFTSCCPAWVRQAENYYPE-LLGNLSSAKSPQQIFGAASKTYYPTVE 340
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTL 289
G+ P +Y VT+MPC KK EA R + NE G R++D V+T EL ++ + ++ TL
Sbjct: 341 GLDPKSVYTVTIMPCTAKKYEADRTEMENE--GLRNIDAVLTTRELAKMIKDAKINFATL 398
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
++EK D E+ ++ +GG L A + + +E+K +R D
Sbjct: 399 EDEK---ADPAMGEYTGAGVIF---GATGGVMEAALRTAKDFVEDKDLIDIEYKQVRGLD 452
Query: 350 -IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
I+EAT G + NG N+ ++ + Y F+E+M+CP GC+NGG Q
Sbjct: 453 GIKEATVEIGGKNYNVAVINGSANLTKFVEGGQMDEKQYHFVEVMSCPGGCVNGGGQ--- 509
Query: 409 EKVASPKETALELETILCDL--------AKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
VA+ + + + K + +N L +Y ++G K +L+
Sbjct: 510 PHVAAKDRDTANVRAVRASVLYNQDKTAVKRKSHKNEALMKMYNEYMGMPGQHKAHELLH 569
Query: 461 TSY 463
Y
Sbjct: 570 LKY 572
>gi|125972863|ref|YP_001036773.1| hydrogenase, Fe-only [Clostridium thermocellum ATCC 27405]
gi|125713088|gb|ABN51580.1| hydrogenase, Fe-only [Clostridium thermocellum ATCC 27405]
Length = 582
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 183/364 (50%), Gaps = 30/364 (8%)
Query: 116 IVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFL 174
+V+ A ++LG +F + +V K+ RLG V D A +++E E +
Sbjct: 226 VVVQTAPAVRVALGEEFGMPIGSRVTGKMVAALSRLGFKKVFDTDTAADLTIMEEGTELI 285
Query: 175 DRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
+R +GG PL TS PGW+ + E ++ EF L +S KSP ++ G+++K++ A+K G+
Sbjct: 286 NRIKNGGKLPLITSCSPGWIKFCEHNYPEF-LDNLSSCKSPHEMFGAVLKSYYAQKNGID 344
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK 293
PS ++ V++MPC KK EA R + + GY DVD V+T EL ++
Sbjct: 345 PSKVFVVSIMPCTAKKFEAQRPELSS--TGYPDVDVVLTTRELARMIKE--TGIDFNSLP 400
Query: 294 DGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGE-SPVVEFKPLR 346
D D P E +G+G G V+ AIR +L G+ + +E+ +R
Sbjct: 401 DKQFDDPMGE----------ASGAGVIFGATGGVMEAAIRTVGELLSGKPADKIEYTEVR 450
Query: 347 NPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
D I+EA+ TL+ +A+G N + L+ K+K Y FIEIMACP GC+NGG Q
Sbjct: 451 GLDGIKEASIELDGFTLKAAVAHGLGNARKLLDKIKAGEADYHFIEIMACPGGCINGGGQ 510
Query: 406 -IRNEKVASPKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLN 460
I+ V + K+ E + + +S P EN ++ LY+ + G + K +L+
Sbjct: 511 PIQPSSVRNWKDIRCERAKAIYEEDESLPIRKSHENPKIKMLYEEFFGEPGSHKAHELLH 570
Query: 461 TSYH 464
T Y
Sbjct: 571 THYE 574
>gi|19548180|gb|AAL90459.1|AF446076_1 [Fe]-hydrogenase, partial [Piromyces sp. E2]
Length = 555
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 212/421 (50%), Gaps = 46/421 (10%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
++ T C+ C C IT+++ E ++V+R + + K +V+S A +
Sbjct: 152 MNFTKCVECGQCSQVCPVGAITERN--ECIEVLRHLDTKR-------KIVVVSTAPAIRV 202
Query: 127 SLGAKF-ALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
+L +F A K+ K+LG D + D + +++E E + R GG P+
Sbjct: 203 ALAEEFNAEPDFDFTGKMVAGLKKLGFDYIFDTNFSADLTIMEEGTELITRLNEGGKFPM 262
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGW+ EKS+ E I +S KSPQQ++G++IKT+ A+K+ P I HV++MP
Sbjct: 263 FTSCCPGWINMVEKSYPE-IRDNLSSCKSPQQMIGAVIKTYFAKKINAKPEDIIHVSVMP 321
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK EA R +F + G D+D VIT EL LL +L E K+ D P
Sbjct: 322 CTAKKGEAKRPEFKRD--GVPDIDHVITTRELITLL--KLKRINPSELKNEKFDSP---- 373
Query: 305 NPHRMLLVNGTGSG---GYAHNVLSHAIR--QLCPG-ESPVV--EFKPLRNPD-IREA-- 353
L G+ +G G V+ A+R Q+ G E+P+ E K +R D I+ A
Sbjct: 374 ------LGIGSSAGNLFGVTGGVMEAAVRTAQIITGVENPIPLGELKAIRGLDGIKAASV 427
Query: 354 ---TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
T DV +R + +G NIQ ++KLK+K L +DF+E+M CP GC+NGG Q K
Sbjct: 428 PLKTKDGKDVNVRAAVVSGGANIQKFLEKLKKKELEFDFVEMMMCPGGCINGGGQ---PK 484
Query: 411 VASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
A PK A ++E + ++ R EN + +YK +L + +L+T Y++
Sbjct: 485 SADPKVVAKKMERMYTMDDQASLRLSHENPEITQIYKEFLKEPNGHLSHELLHTHYNDRS 544
Query: 468 K 468
K
Sbjct: 545 K 545
>gi|164612837|gb|ABY63664.1| [FeFe] hydrogenase [Clostridium butyricum]
Length = 574
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 198/423 (46%), Gaps = 38/423 (8%)
Query: 57 GREEKLKKVE---ISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNEN 112
G + K++ +E T+CL C C+ + + ++ H + V + + + N H
Sbjct: 172 GPDRKVQAIEGKCFDETNCLLCGQCVAACPVAALNEKPHIDRVKEALEDPNKH------- 224
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
+++++A S+G F + + V KL ++LG D V D+ +++E
Sbjct: 225 ---VIVAMAPAVRTSMGELFKMGYGVDVTGKLYSSLRQLGFDKVFDINFGADMTIMEEAT 281
Query: 172 EFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
EF++R + G P+FTS CP WV AE + E +L +S KSPQQ+ G+ KT+
Sbjct: 282 EFIERINNNGPFPMFTSCCPAWVRQAENYYPE-LLGNLSSAKSPQQIFGAASKTYYPTVE 340
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTL 289
G+ P +Y VT+MPC KK EA R + NE G R++D V+T EL ++ + ++ TL
Sbjct: 341 GLDPKSVYTVTIMPCTAKKYEADRTEMENE--GLRNIDAVLTTRELAKMIKDAKINFATL 398
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
++EK D E+ ++ +GG L A + + +E+K +R D
Sbjct: 399 EDEK---ADPAMGEYTGAGVIF---GATGGVMEAALRTAKDFVEDKDLIDIEYKQVRGLD 452
Query: 350 -IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
I+EAT G + NG N+ ++ + Y F+E+M+CP GC+NGG Q
Sbjct: 453 GIKEATVEIGGKNYNVAVINGSANLTKFVEGGQMDEKQYHFVEVMSCPGGCVNGGGQ--- 509
Query: 409 EKVASPKETALELETILCDL--------AKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
VA+ + + + K + +N L +Y ++G K +L+
Sbjct: 510 PHVAAKDRDTANVRAVRASVLYNQDKTAIKRKSHKNEALMKMYNEYMGMPGQHKAHELLH 569
Query: 461 TSY 463
Y
Sbjct: 570 LKY 572
>gi|410727827|ref|ZP_11366022.1| hydrogenase, Fe-only [Clostridium sp. Maddingley MBC34-26]
gi|410597825|gb|EKQ52433.1| hydrogenase, Fe-only [Clostridium sp. Maddingley MBC34-26]
Length = 575
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 188/403 (46%), Gaps = 27/403 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+CL C C+ + ++++ H + V + + + N H +++++A S+
Sbjct: 189 TNCLLCGQCVIACPVAALSEKPHMDRVKEALEDPNKH----------VIVAIAPSIRTSM 238
Query: 129 GAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F L + V KL + LG D V D+ +++E EF++R + G P+FT
Sbjct: 239 GELFKLGYGVDVTGKLYTALRMLGFDKVFDINFGADMTIMEEATEFIERVKNNGPFPMFT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV E + EF L +S KSPQQ+ G+ KT+ E G++P ++ VT+MPC
Sbjct: 299 SCCPSWVRLVENYYPEF-LENLSSAKSPQQIFGAASKTYYPEIEGLNPKDVFTVTVMPCT 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA R + N+ G R++D VIT EL ++ + + +DG D E+
Sbjct: 358 SKKFEADRKEMAND--GIRNIDAVITTRELAKMIKD--SKINFANLEDGKADLAMGEYTG 413
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ GT +GG L A + + VE+ +R D I+EA G
Sbjct: 414 AGVIF--GT-TGGVMEAALRTAKDFVEDKDLTNVEYTQVRGFDGIKEAAVEIGGENYNIA 470
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR-----NEKVASPKETALE 420
+ NG N+ ++ K Y FIE+M+CP GC+NGG Q E V A
Sbjct: 471 VINGSSNLFEFMKSGKINEKQYHFIEVMSCPGGCINGGGQPHVNAKDRENVDVRALRASV 530
Query: 421 LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L +L K + +N+ L +Y ++G +L+ Y
Sbjct: 531 LYNQDKNLEKRKSHKNSALLKMYHEYMGAPGEGIAHKLLHIKY 573
>gi|266619028|ref|ZP_06111963.1| ferredoxin hydrogenase [Clostridium hathewayi DSM 13479]
gi|288869449|gb|EFD01748.1| ferredoxin hydrogenase [Clostridium hathewayi DSM 13479]
Length = 587
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 194/413 (46%), Gaps = 31/413 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + + ++S +EV I + + H +++ A L
Sbjct: 195 TSCVSCGQCIAVCPTGALYEKSCIDEVAAAIADPSKH----------VIVQTAPAVRAGL 244
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F V K+ +R+G D V D + +++E +EF++R +GG P+ T
Sbjct: 245 GEEFGYPIGTNVEGKMAAALRRIGFDKVFDTNFSADLTIMEEAHEFIERVKNGGTLPMIT 304
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ Y E + + +S KSPQQ+ G++ K++ AEK+G+ P I V++MPC
Sbjct: 305 SCSPGWIKYCEHYFPD-MTDNLSTCKSPQQMFGAIAKSYYAEKMGLKPEDIVSVSVMPCT 363
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R + + G DVD +T EL ++ E D D P
Sbjct: 364 AKKFEIGRDN--QDANGCPDVDYSMTTRELARMIKK--YGIRFNELPDEEFDAPLGLGTG 419
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ +GG L A+ L E V+F +R + I+EA + + ++
Sbjct: 420 AAVIF---GATGGVMEAALRTAVETLTGEELEKVDFTDVRGTEGIKEAVYNVAGMDVKVA 476
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNE-KVASPKETA 418
+A+G N + L+ ++K Y FIEIM CP GC+NGG Q +RN + + +
Sbjct: 477 VASGLGNAKELLNRVKSGEADYHFIEIMGCPGGCVNGGGQPQQPGSVRNTVDIRALRAKV 536
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
L E + KS EN ++ LY+ +LG ++K H+L+T+Y N I
Sbjct: 537 LYDEDAANTIRKS--HENPAIKELYETYLGKPGSEKAHHLLHTTYVKRKVNEI 587
>gi|160624920|gb|ABO42543.2| hydrogenase [Clostridium butyricum]
Length = 574
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 197/423 (46%), Gaps = 38/423 (8%)
Query: 57 GREEKLKKVE---ISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNEN 112
G + K++ +E T+CL C C+ + + ++ H + V + + + N H
Sbjct: 172 GPDRKVQAIEGKCFDETNCLLCGQCVAACPVAALNEKPHIDRVKEALEDPNKH------- 224
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
+++++A S+G F + + V KL ++LG D V D+ +++E
Sbjct: 225 ---VIVAMAPAVRTSMGELFKMGYGVDVTGKLYSSLRQLGFDKVFDINFGADMTIMEEAT 281
Query: 172 EFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
EF++R + G P+FTS CP WV AE + E +L +S KSPQQ+ G+ KT+
Sbjct: 282 EFIERINNNGPFPMFTSCCPAWVRQAENYYPE-LLGNLSSAKSPQQIFGAASKTYYPTVE 340
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTL 289
G+ P +Y VT+MPC KK EA R + NE G R++D V+T EL ++ + ++ L
Sbjct: 341 GLDPKSVYTVTIMPCTAKKYEADRTEMENE--GLRNIDAVLTTRELAKMIKDAKINFAAL 398
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
++EK D E+ ++ +GG L A + + +E+K +R D
Sbjct: 399 EDEK---ADPAMGEYTGAGVIF---GATGGVMEAALRSAKDFVEDKDLTDIEYKQVRGLD 452
Query: 350 -IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
I+EAT G + NG N+ ++ + Y F+E+M+CP GC+NGG Q
Sbjct: 453 GIKEATVEIGGKNYNVAVINGSANLTKFVEGGQMDEKQYHFVEVMSCPGGCVNGGGQ--- 509
Query: 409 EKVASPKETALELETILCDL--------AKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
VA+ + + + K + +N L +Y ++G K +L+
Sbjct: 510 PHVAAKDRDTANVRAVRASVLYNQDKTAVKRKSHKNEALMKMYNEYMGMPGQHKAHELLH 569
Query: 461 TSY 463
Y
Sbjct: 570 LKY 572
>gi|337286723|ref|YP_004626196.1| hydrogenase, Fe-only [Thermodesulfatator indicus DSM 15286]
gi|335359551|gb|AEH45232.1| hydrogenase, Fe-only [Thermodesulfatator indicus DSM 15286]
Length = 510
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 204/421 (48%), Gaps = 45/421 (10%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHE-EVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
E+ +C C+ + Q+ E E EN+ + +V+ A
Sbjct: 105 EVVCVNCGQCTAYCPGKRGIPAMQERDETEKAFAFLENDEYH---------VVVQTAPAV 155
Query: 125 VLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGP 183
+++G +F L E +L +RLG D V D A +++E EF+ R + P
Sbjct: 156 RVAIGEEFGLPPGEWEEGQLVAALRRLGFDAVFDTNFAADLTIMEEATEFVKRVVYAEKP 215
Query: 184 L--FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
L FTS CPGWV +AE + E +L ++S KSPQQ++G++ KT+ A++ G+ PS I +
Sbjct: 216 LPMFTSCCPGWVKFAEYFYPE-LLSHLSSCKSPQQMLGAVAKTYYAKERGIDPSKIISIA 274
Query: 242 LMPCYDKKLEASR------ADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
+MPC KK EA R A++++ E DVD V+T EL + L+ +
Sbjct: 275 VMPCTAKKFEAQRPEMKAAAEYWHNEEITADVDLVLTVRELARM---------LKAKNID 325
Query: 296 ILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESP---VVEFKPLR 346
+L P ++++P +L TG+ G V+ A+R GE P ++EF P+R
Sbjct: 326 LLALPEEDYDP---ILGEDTGAARIFGVTGGVMEAAVRTAYYFLTGEDPPDTLLEFTPVR 382
Query: 347 N-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
D++EA+ T+ + NG N++N+ + + + FIE+MAC GC++GG Q
Sbjct: 383 GLDDVKEASLNINGATINIAVVNGLANVRNVCEIVMDNPNKWHFIEVMACRGGCISGGGQ 442
Query: 406 IRNEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTS 462
R E + + +E++ S+ R N + LY+ +LG + + + +L+T
Sbjct: 443 PRTEVPPTDEIRLARIESLYTSDELSQIRLSYLNEEVRALYEKFLGEPNGELAEELLHTH 502
Query: 463 Y 463
Y
Sbjct: 503 Y 503
>gi|336436392|ref|ZP_08616104.1| hypothetical protein HMPREF0988_01689 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336007257|gb|EGN37282.1| hypothetical protein HMPREF0988_01689 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 580
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 214/424 (50%), Gaps = 51/424 (12%)
Query: 63 KKVEISLTDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
K +I DC C CIT + L + +V K I + N K V+ +A
Sbjct: 179 KNRKIEEADCSLCGQCITHCPTGALRARDDTAKVWKAIDDPN----------KITVVQVA 228
Query: 122 IQPVLSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
+ G LS E+ + K+ +RLG D V D + +++E +EF+ R SG
Sbjct: 229 PAVRTAWGEALGLSREEATMGKITDSLRRLGFDYVFDTTFSADLTIMEEGSEFVKRLTSG 288
Query: 181 ---GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P+FTS CPGWV + KS ++ +S KSPQQ+ G+ +KT+ A+ +GV P +I
Sbjct: 289 ELKDRPMFTSCCPGWVRFI-KSQYPHLVKQLSTAKSPQQMFGAAMKTYFAKSIGVDPENI 347
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGI 296
V++MPC KK E + FY E G+ DVD V+T EL ++ + +A +TL++E
Sbjct: 348 CTVSVMPCTAKKGECNMELFYEEYAGH-DVDLVLTTRELTRMIRSAHIAPSTLKDE---- 402
Query: 297 LDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD 349
DE L+ +G+G+G G V+ A+R L G++P + FK +R
Sbjct: 403 ---VCDE------LMQDGSGAGVIFGATGGVMEAALRSAYFLVTGKNPDADAFKNVRRTR 453
Query: 350 IREATFTC----GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
E T T GD+T+R + +G N + LI++++R+ + +DF+E+MACP GC+ GG Q
Sbjct: 454 EDEFTMTAEIPIGDITVRTAVVSGLANTRRLIERIEREEVHFDFVEVMACPGGCVGGGGQ 513
Query: 406 IRNEKVASPKETALELETILCDL-AKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNT 461
+ +E AL L L A +E R EN ++ LY ++ + K HML
Sbjct: 514 ----PIHDSEELALTRSKNLYFLDASNELRFSHENPDIQKLYDDFMEAPLSHKA-HMLLH 568
Query: 462 SYHN 465
+ HN
Sbjct: 569 TDHN 572
>gi|403216247|emb|CCK70744.1| hypothetical protein KNAG_0F00750 [Kazachstania naganishii CBS
8797]
Length = 474
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 208/467 (44%), Gaps = 106/467 (22%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPI-EKPSGPRTGAKIRIQDDGAYIQETNGREEKLKK 64
S +L DL+DFI P C K + +PSG + +G Y+ E E + K
Sbjct: 1 MSTLLSEEDLNDFISPELACTKTTEVTHEPSG--------VDPNGEYVVEKES--EAVSK 50
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
V I+L+DCLACSGCITS+E +++ +QSH+ +K + ++ + +S+A Q
Sbjct: 51 VSITLSDCLACSGCITSSEEIMLQRQSHDVFLK------------RDTSRPLAVSIAPQC 98
Query: 125 VLSLGAKFALSHEQVVAKLCGFFK-RLGVDLVLDVGIAHCFSL---VELENEFLDRFLSG 180
+SL + ++ ++ L F+ R G V+ + SL +E ++ + G
Sbjct: 99 RVSLATHYGMTVQEFDLCLINVFQQRFGAQYVVGIEYGRIISLHRTIEAVRQWKAQ-QEG 157
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P ++ PG+ Y EK+ E + P + VKSPQQ G L+K +L YH+
Sbjct: 158 AAPCLSAIDPGFTIYTEKTKNELV-PLLVNVKSPQQTTGHLLKAATGPEL-------YHL 209
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA-------------NELATT 287
T+ +DKKLEASR + E VDCVIT EL L A L T
Sbjct: 210 TIQAVFDKKLEASRTECEAE------VDCVITPRELLSLFAETDTDFVQFRTQETSLYTA 263
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN 347
+ W +E G SGGYA+ + A +QL PG S ++E P RN
Sbjct: 264 ACPPTLSAEISWSSNE----------GNSSGGYAYQYI-RAQQQLYPG-SCILEL-PGRN 310
Query: 348 PDIREATFT----CGDVTLRFCIA-NGFRNIQNLI---------------QKLKRKRL-- 385
IRE G TL +GFRNIQN++ Q L+++R+
Sbjct: 311 KYIREFRLVTDPHAGGATLASATELSGFRNIQNMVRHLSQRAHPHPQRRVQSLRKRRVNA 370
Query: 386 --------------PY--DFIEIMACPSGCLNGGAQIRNEKVASPKE 416
PY DFIE+ A P G +NGG + + + +E
Sbjct: 371 ITTSPSSSSSSFARPYETDFIEVNASPGGAINGGGLVNDAQSRRQRE 417
>gi|338812002|ref|ZP_08624201.1| hydrogenase subunit [Acetonema longum DSM 6540]
gi|337275971|gb|EGO64409.1| hydrogenase subunit [Acetonema longum DSM 6540]
Length = 576
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 209/419 (49%), Gaps = 57/419 (13%)
Query: 66 EISLTDCLACSG-CITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+++ T C C+ C T A ++ + + EV KV+ + H +V+ A
Sbjct: 190 QVACTFCGQCAAVCPTGA---IVERDNTAEVWKVLSDPQKH----------VVVQTAPAV 236
Query: 125 VLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
++LG L Q+V K+ +RLG D V D + +++E +EF++R GG
Sbjct: 237 RVALGEALGLDAGQIVTGKMVAALRRLGFDKVFDTDFSADLTIMEEGSEFIERLTKGGKL 296
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ TS PGWV + E + + +L ++S KSPQQ+ G+L+KT+ AEK G+ P+ I V++
Sbjct: 297 PMITSCSPGWVNFIELMYPD-LLEHLSTAKSPQQMFGALVKTYYAEKSGISPAGIVSVSI 355
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK EA+R + + G++DVD V+T EL ++ ++ LD+
Sbjct: 356 MPCTAKKAEAARTEMKSN--GHQDVDYVLTTRELGRMI------------REAGLDFNAL 401
Query: 303 EHNPHRMLLVNGTGSG---GYAHNVLSHAIRQLC---PGES-PVVEFKPLRN-PDIREAT 354
+ L TG+G G V+ A+R + G++ P +EF +R IREA
Sbjct: 402 PSEEYDAPLGISTGAGVIFGATGGVMEAALRTVAETVTGKALPDIEFHNVRGLTGIREAV 461
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-------IR 407
GD ++ +A+ N + L++K++ Y FIEIMACP GC+ GG Q +R
Sbjct: 462 VPVGDSKVKVAVAHTLGNARMLMEKIRAGVADYHFIEIMACPGGCIGGGGQPAPISQEVR 521
Query: 408 NEKVASPKETALELETILCDLAKS--EPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
+++ + + CD A + + EN + LY WLG +K +L+T YH
Sbjct: 522 QQRINAIYQ---------CDQAMTLRKSHENPAVRELYDTWLGKPLGEKSHKLLHTHYH 571
>gi|300854656|ref|YP_003779640.1| iron only hydrogenase [Clostridium ljungdahlii DSM 13528]
gi|300434771|gb|ADK14538.1| iron only hydrogenase [Clostridium ljungdahlii DSM 13528]
Length = 578
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 195/401 (48%), Gaps = 27/401 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C C C++ + +TQ S+ +V +V+ + + K +V+ A ++L
Sbjct: 192 TQCTFCGQCVSVCPTAALTQVSNVAKVWEVLTDPD----------KYVVVQTAPAIRVTL 241
Query: 129 GAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G KF + +V K+ +RLG D V D A +++E +EF+DR +GG P+ T
Sbjct: 242 GEKFGMEPGTIVTGKMVSALRRLGFDKVCDTDFAADVTILEEAHEFIDRLQNGGRLPILT 301
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV + E + +L S KSP + G+L KT++AEKL + PS I V++MPC
Sbjct: 302 SCCPSWVKFIEHQFPD-LLDIPSTCKSPHIMFGTLAKTYMAEKLNIDPSKIVVVSVMPCI 360
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E SR + E G+++VD V+T EL ++ A + D D P E
Sbjct: 361 AKKYEISRKELQYE--GHKNVDLVVTTRELADMIME--AGIDFNKLPDEDFDNPLGESTG 416
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ GT +GG L A + VEF +R D ++EA+ +
Sbjct: 417 ASVIF--GT-TGGVIEAALRTAYEWITGETLKEVEFHGVRGLDGLKEASINIDGKEINIG 473
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKETALELE 422
+A+G N + L+++++ Y IEIMACP GC++GG Q N + + AL E
Sbjct: 474 VAHGLGNARKLLEEIESGESKYHAIEIMACPGGCIDGGGQPYHFGNLDIVKKRMEALYRE 533
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L KS EN ++ LYK ++G K +L+T Y
Sbjct: 534 DRNKPLRKSH--ENPEVQALYKEFIGDVGGKKAHDLLHTHY 572
>gi|150018615|ref|YP_001310869.1| hydrogenase, Fe-only [Clostridium beijerinckii NCIMB 8052]
gi|149905080|gb|ABR35913.1| hydrogenase, Fe-only [Clostridium beijerinckii NCIMB 8052]
Length = 461
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 195/403 (48%), Gaps = 35/403 (8%)
Query: 87 ITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL--SLGAKFALSHEQVVA-KL 143
+ + E V + NA K + + + + P + SLG +F L + A K+
Sbjct: 76 VLESVKEPVFAAFNKGNAAKVKEALHDEELFTIVQCAPAVRVSLGEEFGLKAGSLTAGKM 135
Query: 144 CGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGE 202
+RLG + V D +++E +E + R GG P+FTS CP WV + E+S+ E
Sbjct: 136 AAALRRLGFNRVYDTNFGADLTIMEEGSELIKRVTEGGELPMFTSCCPAWVKFMEQSYPE 195
Query: 203 FILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEEL 262
+L ++S KSPQQ+ G++ KT+ A+ V+P IY+V +MPC K+ E R + ++
Sbjct: 196 -LLNHLSSCKSPQQMAGTIFKTYGAKIDKVNPKKIYNVAIMPCTCKQFECDREEM--QDS 252
Query: 263 GYRDVDCVITAVELEVLLA-NELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG----- 316
G++DVD VIT E L+ NE+ L++E+ D P + G G
Sbjct: 253 GFKDVDIVITTREFAQLIRDNEIDFKNLKDEE---FDLPLGSYT--------GAGNIFGV 301
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQN 375
+GG L L P +E +R + IR A +TL+ + +G +N+
Sbjct: 302 TGGVMEAALRSGYEMLTKKSIPNLELNFVRGSEGIRVAEVKLPKITLKVAVVSGLKNVVQ 361
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-------IRNEKVASPKETALELETILCDL 428
+++ +K + +DFIE+M CP GC++GG Q R + S K+ + ++ +L
Sbjct: 362 ILEDIKEGKCDFDFIEVMTCPEGCVSGGGQPKFILDIDRRNALVSRKKGIYKHDS---EL 418
Query: 429 AKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
+ EN ++ LY+ +L +K H+L+T + + K I
Sbjct: 419 EIRKSHENPFIKKLYEEFLIEPLGEKSHHLLHTKFVSRKKEEI 461
>gi|302389113|ref|YP_003824934.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Thermosediminibacter oceani DSM 16646]
gi|302199741|gb|ADL07311.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Thermosediminibacter oceani DSM 16646]
Length = 566
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 194/407 (47%), Gaps = 40/407 (9%)
Query: 66 EISLTDCLACSG-CITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
E+ DC CS C T A I +SH ++V + N++ K ++ +A
Sbjct: 185 EVECVDCGQCSAVCPTGA----IVVKSHIDKVWDAL----------NDDNKVVIAQIAPA 230
Query: 124 PVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
++ G F L E + K +G D+V D A +++E +EFL+R G
Sbjct: 231 VRVAFGEAFGLRPGESTEYLIVSALKAMGFDMVFDTCFAADLTVIEEGHEFLERLEKGEN 290
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
PLFTS CP WV + E ++ F L +S +SP Q+ GS K + A++LGV ++Y V+
Sbjct: 291 LPLFTSCCPAWVKFVEFNYPSF-LNNLSSCRSPHQMFGSFTKNYYAKELGVSRENVYVVS 349
Query: 242 LMPCYDKKLEASRADFYNEELGYR---DVDCVITAVELEVLLANELATTTLQEEKDGILD 298
+MPC KK EA+R EELG DVD V+T EL + + E A ++ K+ D
Sbjct: 350 IMPCTAKKAEAAR-----EELGVDGNPDVDAVLTTREL-IRMVRE-AGIVFKDLKEEPFD 402
Query: 299 WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTC 357
P+ ++ +GG A V +R L G F+ +R + ++EAT
Sbjct: 403 MPFGFSTGGGIIF---GATGGVAEAV----VRTLDGGHR---RFEQVRGSEGLKEATIVK 452
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
+R + +G +N + L++K+K + YD +E+MACP GC+ G Q +E
Sbjct: 453 DGKEIRVAVVHGLKNARELLEKIKSGSVKYDMVEVMACPGGCVGGAGQPSPASTGVREER 512
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
A L I + + EN ++ LY+ WLG ++ L+T Y
Sbjct: 513 AKGLYNIDNRMQLARSDENPMIKMLYEKWLGSPGSEVAHKYLHTHYR 559
>gi|326204155|ref|ZP_08194015.1| hydrogenase, Fe-only [Clostridium papyrosolvens DSM 2782]
gi|325985666|gb|EGD46502.1| hydrogenase, Fe-only [Clostridium papyrosolvens DSM 2782]
Length = 574
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 195/423 (46%), Gaps = 31/423 (7%)
Query: 49 GAYIQETNGREEKLKKVEISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKA 107
GA++ T EE L DC+ C CI L + ++V K + H
Sbjct: 172 GAHMTVTTAYEEGLVG-----QDCINCGQCIKICPVGALQERDDTDKVWKALENPELH-- 224
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSL 166
+V+ A ++LG +F + V K+ +RLG + V D + ++
Sbjct: 225 --------VVVQTAPAVRVALGEEFGFAPGTNVEGKMVTALRRLGFNKVFDTNFSADLTI 276
Query: 167 VELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
+E NE ++R +GG P+ TS PGW+ + E ++ +FI +S KSPQQ+ G++ K++
Sbjct: 277 IEEGNELIERIQNGGKLPMITSCSPGWIKFCEHNYHDFI-ENLSSCKSPQQMFGAIAKSY 335
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA 285
K V P ++ V++MPC KK EA R + + G +D+D VIT EL ++ A
Sbjct: 336 YPVKADVDPKSMFVVSVMPCTAKKYEADREEMSVD--GLKDIDAVITTRELAKMIRQ--A 391
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPL 345
E +D D ++ + N +GG L +L +++ +
Sbjct: 392 GIKFAELEDSKQDSILGTYSGAGTIFGN---TGGVMEAALRTVADKLTGKSLDCIDYTAV 448
Query: 346 RNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
R + IREAT D+ ++ +ANG N L+ K++ Y FIE+M C GC+NGG
Sbjct: 449 RGLEGIREATVNIADMEIKVAVANGTGNASKLLDKIRAGEANYHFIEVMGCEGGCINGGG 508
Query: 405 Q--IRNEKVASPKETAL--ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
Q I+++ +TA L I K + EN ++ LY +LG K +L+
Sbjct: 509 QPIIKDKSTTEAVKTARIKGLYNIDASCEKRKSHENPEIQKLYSEYLGEAGGHKAHKLLH 568
Query: 461 TSY 463
T Y
Sbjct: 569 THY 571
>gi|345311184|ref|XP_001519777.2| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like,
partial [Ornithorhynchus anatinus]
Length = 382
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 190/395 (48%), Gaps = 37/395 (9%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSL 166
A+ K +V+S++ Q SLGA+F L+ + KL FF+ LGV V D + FSL
Sbjct: 1 AAEPGQQKLVVVSISPQSRASLGARFELTPLETARKLTAFFQSLGVHHVFDTTFSRNFSL 60
Query: 167 VELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSL 221
+E + EF+ RF P+ S CPG ++ G L ++P +
Sbjct: 61 LESQREFVARFRRHSASEPALPMLASACPG----GDEGPGRAEL-----RRNPSGLCAER 111
Query: 222 IKTHL-AEKLGVHPSHIYHVTLMPC------YD-------KKLEASRADFYNEELGYRDV 267
+ T + +E + P + L P +D ++ S D E +R
Sbjct: 112 LGTGVESESVSRPPGGRSRIPLPPASSPDCGFDGATRQMPPRIYPSLVDISPPE--FRAP 169
Query: 268 DCVITAVEL---EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNV 324
+ AV EV+ E +L + LD + + G G+GGY +V
Sbjct: 170 ARCLQAVVFPPGEVVRLLEQEGVSLPDLDPAPLDPTFGSGLDQEPIGHRGGGAGGYLEHV 229
Query: 325 LSHAIRQLCPGESPVVEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRK 383
HA R+L + +KPL+N D +E T G V L +A GFRNIQN++QKLKR
Sbjct: 230 FRHAARELFGISVGELTYKPLKNKDFQEVTLERDGSVLLHCALAYGFRNIQNVVQKLKRG 289
Query: 384 RLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRE-NATLEHL 442
+ PY ++E+MACP+GCLNGG QIR++ AS ++ E A+SEP E + + L
Sbjct: 290 KSPYHYVEVMACPAGCLNGGGQIRDDG-ASGRDLMRRTEQQYA-AARSEPPEAHPGVREL 347
Query: 443 YKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVKW 477
Y WLGG+ +++ +L+T YH + K + N+KW
Sbjct: 348 YAQWLGGEGSERAAQLLHTRYHALEKAGASFNIKW 382
>gi|339442556|ref|YP_004708561.1| hypothetical protein CXIVA_14930 [Clostridium sp. SY8519]
gi|338901957|dbj|BAK47459.1| hypothetical protein CXIVA_14930 [Clostridium sp. SY8519]
Length = 576
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 209/408 (51%), Gaps = 38/408 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
+ C C CIT + ++ ++V VI + ++ K V+ +A + G
Sbjct: 186 SKCALCGQCITHCPVGALKER--DDVTDVIH-------ALDDPEKVTVVQIAPSIRTAWG 236
Query: 130 AKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFT 186
F ++ E+ + +L K LG D V D + +++E +EF+ R G P+FT
Sbjct: 237 EMFGMTPEEASMERLSATLKFLGFDYVFDTDFSADLTIMEEGSEFVQRLKDGKRDFPMFT 296
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + + + E++ +S KSPQQ+ G++IK+++A+ G+ P ++Y V+LMPC
Sbjct: 297 SCCPGWVRFLKAHYPEYV-DNLSTAKSPQQMFGAIIKSYVAQIKGIDPKNVYSVSLMPCL 355
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E + N+ G DVD V+T EL LL ++ L EE+ LD P
Sbjct: 356 AKKHECA-IPVMNDACGDPDVDTVLTNRELVRLLRSQHVNPGLLEEEP--LDDP------ 406
Query: 307 HRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREATFTCG 358
+ G+G+G G V+ A+R L GE+P + F+ +R D +EA F
Sbjct: 407 ----MGFGSGAGNIFGATGGVMEAALRSAYYLVTGENPDPDAFRAVRGMDGWKEAEFEIA 462
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNEKVASPKE 416
+TL+ + NG N L+ L++ ++ YDF+E+MACP GC+ GG Q +++A+ +
Sbjct: 463 GMTLKIAVVNGLANADKLLTALRKGKVQYDFVEVMACPGGCVGGGGQPFYDGKEMAASRA 522
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
L + DL S EN ++ +Y +LG ++K H+L+T +H
Sbjct: 523 PILYAFDQITDLRFS--HENPSITKVYSEYLGEPLSEKSHHLLHTDHH 568
>gi|300854909|ref|YP_003779893.1| Fe-Fe hydrogenase 2 [Clostridium ljungdahlii DSM 13528]
gi|300435024|gb|ADK14791.1| Fe-Fe hydrogenase 2 [Clostridium ljungdahlii DSM 13528]
Length = 457
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 167/332 (50%), Gaps = 23/332 (6%)
Query: 141 AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKS 199
K+ + LG D + D A +++E +E + R GG P+FTS CP WV + E+
Sbjct: 136 GKMAAALRELGFDRIYDTNFAADLTIMEEVSELIKRVTEGGVLPMFTSCCPAWVKFIEQD 195
Query: 200 HGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN 259
+ E I P++S KSPQQ+ G+L+KT+ A+ GV IY V++MPC KK E R + +
Sbjct: 196 YPELI-PHLSSCKSPQQMEGALLKTYGAQVDGVDAGKIYSVSVMPCICKKFECERPEMKD 254
Query: 260 EELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGG 319
GY+DVD VIT EL L+ + EK+ D P ++ + +GG
Sbjct: 255 S--GYQDVDAVITTRELAQLIKDAGIDFNGLPEKE--FDKPLGTYSGAGTIFC---ATGG 307
Query: 320 YAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQ 378
L A + + E P V+ K +R + +R + GD+TL+ + G +N+ +++
Sbjct: 308 VMEAALRTAYKLITKEEIPDVDLKFIRGGEGVRSSEIKVGDLTLKVAVVAGLKNVVPVLE 367
Query: 379 KLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILC-------DLAKS 431
+K + + FIE+M CP GC++GG Q KV P E A C ++
Sbjct: 368 AIKTGKADFHFIEVMTCPVGCVSGGGQ---PKVLIPDEKADAYTNRTCSTYVHDENMEYR 424
Query: 432 EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ +N ++ +YK +L D H+L+T+Y
Sbjct: 425 KSHDNPEIQKIYKEFL---VEDNIHHLLHTTY 453
>gi|188588322|ref|YP_001919488.1| hydrogenase-1 [Clostridium botulinum E3 str. Alaska E43]
gi|188498603|gb|ACD51739.1| hydrogenase-1 [Clostridium botulinum E3 str. Alaska E43]
Length = 576
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 188/406 (46%), Gaps = 33/406 (8%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+CL C CI + ++++SH E V + + N H +++++A ++
Sbjct: 189 TNCLLCGQCIAACPVDALSEKSHTERVQNALEDPNKH----------VIVAMAPSVRAAM 238
Query: 129 GAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + + V K+ + LG + + D+ +++E E + R GG P+FT
Sbjct: 239 GEAFKMGYGVDVTGKIYTALRMLGFNKIFDINFGADMTIMEEATELISRVNEGGPFPMFT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV E EFI +S KSPQQ+ G+ KT+ E G+ ++ VT+MPC
Sbjct: 299 SCCPSWVREVENYFPEFI-DNLSSAKSPQQIFGAASKTYYPEIEGLDAKDVFTVTIMPCT 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA R + N G R++D VIT EL ++ + A +D D E+
Sbjct: 358 SKKFEADREEMENN--GLRNIDAVITTRELAKMI--KTAKINFSTLEDSEADPSMGEYTG 413
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
+ +GG L A + +E++ +R + I+EAT T G
Sbjct: 414 AGAIF---GATGGVMEAALRSAKDFIENKSLEEIEYEQVRGLEGIKEATVTLGGQEYNIA 470
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETIL 425
+ NG N+ + ++ + + Y FIE+M+CP GC+NGG Q V S + +++ T+
Sbjct: 471 VINGAANVFDFVKSGRMEEKQYHFIEVMSCPGGCVNGGGQ---PHVNSKDRSKIDIRTVR 527
Query: 426 CD--------LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L+K + ENA+L +Y+ ++G +L+ Y
Sbjct: 528 ASVLYNQDKGLSKRKSHENASLLKMYETYMGKPGKGLAHELLHIKY 573
>gi|46580181|ref|YP_010989.1| [Fe] hydrogenase gamma [Desulfovibrio vulgaris str. Hildenborough]
gi|387153384|ref|YP_005702320.1| hydrogenase, Fe-only [Desulfovibrio vulgaris RCH1]
gi|40828|emb|CAA40970.1| Hyd gamma [Desulfovibrio vulgaris str. Hildenborough]
gi|46449598|gb|AAS96248.1| [Fe] hydrogenase gamma [Desulfovibrio vulgaris str. Hildenborough]
gi|311233828|gb|ADP86682.1| hydrogenase, Fe-only [Desulfovibrio vulgaris RCH1]
gi|226889|prf||1610171A hydrogenase gamma
Length = 606
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 200/420 (47%), Gaps = 32/420 (7%)
Query: 68 SLTDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
S +DC+ C C + L + E V+ + + V A +
Sbjct: 191 SASDCVGCGQCTLVCPVGALAGRDDVERVIDYLYDPEI----------VTVFQFAPAVRV 240
Query: 127 SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
LG +F L V ++ + LG D+VLD A ++E E L R G PL
Sbjct: 241 GLGEEFGLPPGSSVEGQVPTALRLLGADVVLDTNFAADLVIMEEGTELLQRLRGGAKLPL 300
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGWV +AEK H ILP++S +SPQQ +G+L KT+LA + V P + V+LMP
Sbjct: 301 FTSCCPGWVNFAEK-HLPDILPHVSTTRSPQQCLGALAKTYLARTMNVAPERMRVVSLMP 359
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK EA+R +F + G RDVD V+T E LL E G+ P D+
Sbjct: 360 CTAKKEEAARPEFRRD--GVRDVDAVLTTREFARLLRREGIDLA------GLEPSPCDDP 411
Query: 305 NPHRML---LVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGD- 359
R ++ GT +GG L L E VE LR ++REA G+
Sbjct: 412 LMGRATGAAVIFGT-TGGVMEAALRTVYHVLNGKELAPVELHALRGYENVREAVVPLGEG 470
Query: 360 -VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+++ + +G + + +++ + + + F+E+MACP GC++GG Q R+++ +P A
Sbjct: 471 NGSVKVAVVHGLKAARQMVEAVLAGKADHVFVEVMACPGGCMDGGGQPRSKRAYNPNAQA 530
Query: 419 LE--LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVK 476
L ++ + A + N + +Y+++LG ++ +L+T Y + K+ +A ++
Sbjct: 531 RRAALFSLDAENALRQSHNNPLIGKVYESFLGEPCSNLSHRLLHTRYGD-RKSEVAYTMR 589
>gi|167381484|ref|XP_001735739.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902168|gb|EDR28057.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 398
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 195/414 (47%), Gaps = 81/414 (19%)
Query: 10 LQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREE-----KLKK 64
LQ+ +DD+I + C+ P+ P + AKI + G EE KL K
Sbjct: 7 LQIAGVDDYIQQNLVCVMPVKETSPQEHKGVAKISL----------GGPEEGSELPKLTK 56
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
V + L DCLACSGCITSAE+VLI QQ E K I+E + K ++ ++A +
Sbjct: 57 VTVRLEDCLACSGCITSAETVLIEQQGLPEFRKNIKEISQKKK--------VICTIADEC 108
Query: 125 VLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL 184
+ S+ V ++ ++ GVD + D+ A SL + +EF + L
Sbjct: 109 IASMSVVHNQPFNVVWTRVEKALRKEGVDELRDLSQAQDISLFGIYDEF-KEYQKMNKVL 167
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS CPGWVCY+EK G+++ Y+S+V S + G ++K S IYHV++
Sbjct: 168 LTSTCPGWVCYSEKMQGKWMFEYMSKVASSMTIAGMMMKK--------QNSEIYHVSIQM 219
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDW--PWD 302
C+DKKLEA++ YN +DCV+T E+ D I+DW P +
Sbjct: 220 CFDKKLEATKT--YN---NIHVIDCVLTTSEI-----------------DSIVDWNEPIN 257
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTL 362
E V T G+ +S + + E FK RN D E
Sbjct: 258 E--------VTSTRIKGF----ISSPAQYIALMEQKKGPFKITRNKDFLEND-------- 297
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
IANGFRNIQN+++ +K K FIE+ ACP GC+ GG QI+ SPKE
Sbjct: 298 GIAIANGFRNIQNVVRFVKSK-TKLQFIEVEACPGGCICGGGQIK----CSPKE 346
>gi|120602429|ref|YP_966829.1| hydrogenase, Fe-only [Desulfovibrio vulgaris DP4]
gi|120562658|gb|ABM28402.1| hydrogenase, Fe-only [Desulfovibrio vulgaris DP4]
Length = 606
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 200/420 (47%), Gaps = 32/420 (7%)
Query: 68 SLTDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
S +DC+ C C + L + E V+ + + V A +
Sbjct: 191 SASDCVGCGQCTLVCPVGALAGRDDVERVIDYLYDPEI----------VTVFQFAPAVRV 240
Query: 127 SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
LG +F L V ++ + LG D+VLD A ++E E L R G PL
Sbjct: 241 GLGEEFGLPPGSSVEGQVPTALRLLGADVVLDTNFAADLVIMEEGTELLQRLRGGAKLPL 300
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGWV +AEK H ILP++S +SPQQ +G+L KT+LA + V P + V+LMP
Sbjct: 301 FTSCCPGWVNFAEK-HLPDILPHVSTTRSPQQCLGALAKTYLARTMNVAPERMRVVSLMP 359
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK EA+R +F + G RDVD V+T E LL E G+ P D+
Sbjct: 360 CTAKKEEAARPEFRRD--GVRDVDAVLTTREFARLLRREGIDLA------GLEPSPCDDP 411
Query: 305 NPHRML---LVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGD- 359
R ++ GT +GG L L E VE LR ++REA G+
Sbjct: 412 LMGRATGAAVIFGT-TGGVMEAALRTVYHVLNGKELAPVELHALRGYENVREAVVPLGEG 470
Query: 360 -VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+++ + +G + + +++ + + + F+E+MACP GC++GG Q R+++ +P A
Sbjct: 471 NGSVKVAVVHGLKAARQMVEAVLAGKADHVFVEVMACPGGCMDGGGQPRSKRAHNPNAQA 530
Query: 419 LE--LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALNVK 476
L ++ + A + N + +Y+++LG ++ +L+T Y + K+ +A ++
Sbjct: 531 RRAALFSLDAENALRQSHNNPLIGKVYESFLGEPCSNLSHRLLHTRYGD-RKSEVAYTMR 589
>gi|325972134|ref|YP_004248325.1| hydrogenase, Fe-only [Sphaerochaeta globus str. Buddy]
gi|324027372|gb|ADY14131.1| hydrogenase, Fe-only [Sphaerochaeta globus str. Buddy]
Length = 582
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 184/370 (49%), Gaps = 17/370 (4%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFS 165
A++ + K +V+ +A + L F L V K + +RLG V D +
Sbjct: 217 AAAADPQKQVVVQIAPSIRVGLSESFGLPAGTVTTKKIYAALRRLGAKAVHDTNFGADLT 276
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E E + R GG P TS CP WV Y +K + + +L ++S KSP Q++G++ KT
Sbjct: 277 IMEEGTELVTRLTKGGALPQMTSCCPAWVDYVQKYYPD-LLDHVSSAKSPMQMVGAIEKT 335
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE- 283
AEK+G+ P+ +Y V +MPC KK E+ R D + G+RDVD V+T E L+ ++
Sbjct: 336 FYAEKMGMDPAKMYTVAIMPCTAKKYESDR-DEHMYASGFRDVDLVLTTREFARLIKSQG 394
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFK 343
+ +L EE+ D P E++ + +GG + A + E VE
Sbjct: 395 IDFLSLAEEE---ADSPLGEYSGAGTIF---GATGGVMEAAVRTAYHIVTGNELQNVEVD 448
Query: 344 PLRN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKR-----KRLPYDFIEIMACPS 397
+R +I++ T +R + +G +++ ++ +++ K+ PY+FIE+MAC
Sbjct: 449 VVRGLSEIKKGTVDFDGTPVRVAVVHGLSHVKEVMDEIRAAKAEGKQAPYEFIEVMACRG 508
Query: 398 GCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKH 457
GC+ GG Q + KE + L T + A EN +++ LY+ +L + K H
Sbjct: 509 GCIAGGGQPYGATDSLRKERSAGLYTDDKNSAVRRSHENESIQKLYETYLEKPMSHKAHH 568
Query: 458 MLNTSYHNIP 467
+L+T+Y IP
Sbjct: 569 LLHTTYQEIP 578
>gi|225559785|gb|EEH08067.1| nuclear prelamin A recognition factor-like protein [Ajellomyces
capsulatus G186AR]
Length = 591
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 215/490 (43%), Gaps = 122/490 (24%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L DL+DFI P CIKPI S PR +T+ + +V
Sbjct: 1 MSAILSADDLNDFISPGVACIKPIE----SLPR---------------KTDKNSKSHAEV 41
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT------IVLS 119
+L C + I + + + +REN+A ++ E T V S
Sbjct: 42 LNTLDSC----------AELRIDELNECSNAQRLRENDAGFSAEGEQRTTESGGKIFVAS 91
Query: 120 LAIQPVLSLGAKFALSH-------EQVVA-----KLCGFFKRLGVDLVLDVGIAH--CF- 164
++ Q SL A + +S EQ ++ + G + G V+D + C
Sbjct: 92 VSPQARASLAATYGISEREAGYLIEQFLSGPEGLRAGGAYGN-GFTWVIDTNVMRQVCLE 150
Query: 165 --------SLVELENEFLDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
SL ++ + F + P+ +S CPGW+CYAEK+H +LP+ISR+KSPQ
Sbjct: 151 LSVSEVTESLNSSKDTLTETFPAPKRPVLSSACPGWICYAEKTH-PHVLPHISRLKSPQA 209
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE---------ELGY--- 264
+ G+L+KT L++ L + S I+H+ +MPC+DKKLEASR + + + G+
Sbjct: 210 LTGTLVKTVLSKALNISSSQIWHLAIMPCFDKKLEASRQELTDASWQDASSMTQKGHSPT 269
Query: 265 ------RDVDCVITAVELEVLLANE---LATTTLQEEKDGILDWPWDEH-----NPHRML 310
RDVDCVIT+ EL +L + L LQ + D + P
Sbjct: 270 ESYSPVRDVDCVITSRELLMLATSRNISLRNLPLQPLPSPFVPLFPDPYFAPFLFPKSSQ 329
Query: 311 LVNGTG---SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFT--CGDVTLRFC 365
V + SGGY +++L+ + PG ++ + RN D+ E G ++
Sbjct: 330 FVQPSAAGTSGGYLYHILT-TYQHRNPGSQ--IQTQRGRNSDVIEYALISPSGATIIKAA 386
Query: 366 IANGFRNIQNLIQKLK---RKRLP-------------------------YDFIEIMACPS 397
GFRNIQNL++KLK RLP Y +IE+MACP
Sbjct: 387 RYYGFRNIQNLVRKLKPPRASRLPGANPMIGRRAGGGCAATVNSTSATDYAYIEVMACPG 446
Query: 398 GCLNGGAQIR 407
GC NGG QIR
Sbjct: 447 GCTNGGGQIR 456
>gi|359414660|ref|ZP_09207125.1| hydrogenase, Fe-only [Clostridium sp. DL-VIII]
gi|357173544|gb|EHJ01719.1| hydrogenase, Fe-only [Clostridium sp. DL-VIII]
Length = 461
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 202/442 (45%), Gaps = 53/442 (11%)
Query: 66 EISLTDCLACSGCITSAESVLI--TQQSH----------------EEVMKVIRENNAHK- 106
EI C++C CI S + SH E V + NA K
Sbjct: 37 EIDYDVCVSCGQCIQVCNSYAFENRENSHAIEEKRRARGLLESVNEPVFAAFNKGNAAKV 96
Query: 107 --ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHC 163
A NE TIV A +SLG +F L + A K+ +RLG + V D
Sbjct: 97 KEALHNEELFTIV-QCAPAIRVSLGEEFGLKAGSLTAGKMAAALRRLGFNRVYDTNFGAD 155
Query: 164 FSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLI 222
+++E +E + R GG P+FTS CP WV + E+S+ E +L ++S KSPQQ+ G++
Sbjct: 156 LTIMEEGSELIKRVTKGGKLPMFTSCCPAWVKFMEQSYPE-LLNHLSSCKSPQQMAGTIF 214
Query: 223 KTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN 282
KT+ A+ V P IY+V +MPC K+ E R + ++ G++DVD VIT E L+ +
Sbjct: 215 KTYGAKIDKVSPKKIYNVAIMPCTCKQFECDREEM--QDSGFKDVDIVITTREFAQLIRD 272
Query: 283 ELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGES 337
+ + KD D P + G G +GG L L
Sbjct: 273 K--GIDFKNLKDEEFDLPLGSYT--------GAGNIFGVTGGVMEAALRSGYEMLTKKSI 322
Query: 338 PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
P +E +R + IR A +TL+ + +G +N+ +++ +K +DFIE+M CP
Sbjct: 323 PNLELNFVRGSEGIRVAEVKLPKITLKVAVVSGLKNVVKILEDIKEGNCEFDFIEVMTCP 382
Query: 397 SGCLNGGAQ-------IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGG 449
GC++GG Q R + S K+ + ++ +L + EN ++ LY+ +L
Sbjct: 383 EGCVSGGGQPKFILDIDRRNGLVSRKKGIYKHDS---ELEIRKSHENPFIKKLYEEFLIE 439
Query: 450 KSTDKGKHMLNTSYHNIPKNNI 471
+K H+L+T + + K I
Sbjct: 440 PLGEKSHHLLHTKFVSRKKEEI 461
>gi|224367282|ref|YP_002601445.1| protein HydA1 [Desulfobacterium autotrophicum HRM2]
gi|223689998|gb|ACN13281.1| HydA1 [Desulfobacterium autotrophicum HRM2]
Length = 464
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 198/425 (46%), Gaps = 24/425 (5%)
Query: 49 GAYIQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKAS 108
G +Q +G E L++ I L G + + + L +V K++ +
Sbjct: 47 GQCVQICSGYESILEEYAIDRATRLEQRGMLDTVQEPLFAAHYRGDVKKLL--------A 98
Query: 109 SNENTKTIVLSLAIQPV-LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSL 166
+ E+ KT+ L V ++LG +F L++ + K+ +RLG D V D A ++
Sbjct: 99 ALEDEKTVTLVQCAPAVRVALGEEFGLAYGVLTPGKMATSLRRLGFDRVYDTNFAADLTI 158
Query: 167 VELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
+E E L R G P+FTS CPGWV Y E H +LP++S KSPQQ+ G L KT+
Sbjct: 159 MEEGAELLARLEKNEGLPMFTSCCPGWVKYLE-DHYPDLLPHLSSCKSPQQMGGVLFKTY 217
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA 285
AE GV P +Y V +MPC KK E R + G+RDVD VIT EL LL ++
Sbjct: 218 GAELAGVEPGCVYSVAIMPCTCKKYECDRDGM--DSSGFRDVDLVITTRELAQLLKHK-- 273
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPL 345
DG D P ++ + + +GG L ++ VE L
Sbjct: 274 GIKFAGLADGEFDQPLGAYSGAGNIFGS---TGGVMEAALRSSLELATGVPLDSVELNYL 330
Query: 346 RNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
R + R A V L+ I G +++ L+ K+++ + FIE+M CP GC++GG
Sbjct: 331 RGGEGFRVAQVEHQGVQLKVGIVAGIQHVAPLLDKIQQGEADFHFIEVMCCPLGCVSGGG 390
Query: 405 Q----IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
Q + +++ + + L L + EN ++ LYK +LG +K H+L+
Sbjct: 391 QPKTVLPQQRIHATQARKQALYRHDSGLELRKSHENPQIQQLYKDFLGAPLGEKSHHLLH 450
Query: 461 TSYHN 465
+Y +
Sbjct: 451 INYSD 455
>gi|255524302|ref|ZP_05391260.1| hydrogenase, Fe-only [Clostridium carboxidivorans P7]
gi|296185259|ref|ZP_06853669.1| ferredoxin hydrogenase [Clostridium carboxidivorans P7]
gi|255511985|gb|EET88267.1| hydrogenase, Fe-only [Clostridium carboxidivorans P7]
gi|296050093|gb|EFG89517.1| ferredoxin hydrogenase [Clostridium carboxidivorans P7]
Length = 580
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 196/401 (48%), Gaps = 27/401 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C C C++ + +T+ S+ +V +VI + + K +V+ A ++L
Sbjct: 194 TQCTFCGQCVSVCPTAALTEVSNVAKVWEVIADPD----------KYVVVQTAPAIRVAL 243
Query: 129 GAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G KF + +V K+ +RLG D V D A +++E +EF+DR +GG P+ T
Sbjct: 244 GEKFGMEPGTIVTGKMVAALRRLGFDKVCDTDFAADVTILEEAHEFIDRLQNGGRLPILT 303
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV + E + +L S KSP + G+L KT++AEKL + PS I V++MPC
Sbjct: 304 SCCPSWVKFIEHQFPD-LLDIPSTCKSPHIMFGTLAKTYMAEKLNIDPSKIVVVSVMPCI 362
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E SR + +E G ++VD V+T EL ++ A + D D P E
Sbjct: 363 AKKYEISRPELEHE--GEKNVDLVVTTRELADMIME--AGIDFNKLPDEDFDNPLGESTG 418
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ GT +GG L A + VEF +R D ++EA+ G +
Sbjct: 419 ASVIF--GT-TGGVIEAALRTAYEWITGETLKEVEFHSVRGLDGLKEASVNIGGKEINIG 475
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKETALELE 422
+A+G N + L+++++ Y IEIMACP GC++GG Q + + + A+ E
Sbjct: 476 VAHGLGNARKLLEEIESGESKYHAIEIMACPGGCIDGGGQPYHFGDLDIVKKRMEAIYKE 535
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L KS EN ++ LYK ++G K +L+T Y
Sbjct: 536 DRNKTLRKS--HENPEVQALYKEFIGEVGGKKAHDLLHTHY 574
>gi|306821642|ref|ZP_07455240.1| ferredoxin hydrogenase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304550387|gb|EFM38380.1| ferredoxin hydrogenase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 578
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 190/403 (47%), Gaps = 21/403 (5%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T C C C+ + +T+ + N H + KT+++ +A ++LG
Sbjct: 192 TTCTFCGQCLAVCPTGALTEVN----------NTPHVWDVLHSDKTVIVQVAPAVRVALG 241
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F + +V K+ K LG D V D A +++E +EF+ R +GG P+ TS
Sbjct: 242 EEFGMEPGTIVTGKMINALKYLGFDKVFDTNFAADLTIMEEASEFVHRLNNGGKLPILTS 301
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV + E +F L S KSP ++ G++ KT+LA+KL + P ++ V++MPC
Sbjct: 302 CCPSWVNFFEHQFTDF-LDIPSTCKSPHEMFGAIAKTYLAQKLNIDPKNMVLVSVMPCVA 360
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA+R + N +DVD VIT EL L+ E + D D P
Sbjct: 361 KKYEAARPELGNG--AGKDVDYVITTREL-ALMIKEAGINFGELGDDAEFDNPMGASTGA 417
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
++ +GG + A + E P +EF+ LR + I++ T +R +
Sbjct: 418 GVIF---GATGGVIEATVRTAYEWITGNELPKLEFEELRGLEGIKQTTVDIDGRPIRIAV 474
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE-KVASPKETALELETIL 425
ANG N + L+ ++ +D IE+MACP GC+ G Q ++ + ++ A +
Sbjct: 475 ANGLGNTRRLLNMIRDNEAHFDAIEVMACPGGCVGGAGQPYHKGNLDVIRKRAQGIYKAD 534
Query: 426 CDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
D + EN + LYK +LG ++K +L+TSY P+
Sbjct: 535 RDNKIRKSHENPMIIQLYKEFLGEPYSEKAHELLHTSYTARPR 577
>gi|50291209|ref|XP_448037.1| hypothetical protein [Candida glabrata CBS 138]
gi|74609260|sp|Q6FP07.1|NAR1_CANGA RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|49527348|emb|CAG60988.1| unnamed protein product [Candida glabrata]
Length = 551
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 218/482 (45%), Gaps = 105/482 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L L+D+I P+ C KP I+K + + +DG + + ++L+KV
Sbjct: 1 MSALLSEDYLNDYISPALACTKPTEIKK--------EKFVTEDGEF--QVGVEPQELEKV 50
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE---NNAHKASSNENTKTIVLSLAI 122
ISL+DCLACSGCITS+E ++++QQSH + RE + A + T +V+S++
Sbjct: 51 TISLSDCLACSGCITSSEEIMLSQQSHSVFLDAWRELGFDKCGSAGDAQCTNKLVVSISP 110
Query: 123 QPVLSLGAKFALSHEQVVAKLCGFFKRL-GVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
S+ + + + + FK + V+ G S+ + E ++R +
Sbjct: 111 HCRASMARYYGVDVDAADYAILRVFKEVFHATSVIGDGAGRLLSVKRVVEELMERRKASQ 170
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE---------KLGV 232
G +S CPG++ Y EK+ + + P + VKS QQV G+L K E K G
Sbjct: 171 GTALSSICPGFLIYTEKTKPKLV-PMLLNVKSAQQVTGALFKEIALEEGYDVDTSLKDGK 229
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATT----- 287
+ YH+T++PC+DKKLEASR D G +V+CVIT E+ +L E+ +
Sbjct: 230 RTNVQYHLTIVPCFDKKLEASRPD------GEGEVNCVITPREVLAMLG-EMGVSFRKYL 282
Query: 288 --------TLQEEKDGILDWP-----WDEHNP--HRMLLVNGTG-SGGYAHNVLSHAIR- 330
LQ+ + G+L WD P H + NG G S GYA+ + +R
Sbjct: 283 GDWASLDKQLQQSQLGMLRAEMSPAGWD---PLLHWSIPANGDGYSDGYAYQ-YACTVRD 338
Query: 331 -QLCPGESPVVEFKPLRNPDIR-----EATFTCGDVTLRFCIANGFRNIQNLIQKLK--- 381
+ G + V P +N D+ E + G V R C+ +GFRNIQNL +KL
Sbjct: 339 AHVASGCAAQVVSVPGKNADVLEYRVVEPSSEGGKVIARACVLSGFRNIQNLCRKLDPSG 398
Query: 382 -RKR--------------------------------------LPYDFIEIMACPSGCLNG 402
+KR D++E+ ACPSG +NG
Sbjct: 399 HKKRSVRRVAALRSRGRKDSSSEDSTGTPSAISNALGGTANPAECDYVEVSACPSGSING 458
Query: 403 GA 404
G
Sbjct: 459 GG 460
>gi|323484502|ref|ZP_08089868.1| hypothetical protein HMPREF9474_01619 [Clostridium symbiosum
WAL-14163]
gi|323692563|ref|ZP_08106796.1| hydrogenase [Clostridium symbiosum WAL-14673]
gi|323402280|gb|EGA94612.1| hypothetical protein HMPREF9474_01619 [Clostridium symbiosum
WAL-14163]
gi|323503429|gb|EGB19258.1| hydrogenase [Clostridium symbiosum WAL-14673]
Length = 582
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 185/402 (46%), Gaps = 25/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T C++C CI + + ++ + KV A+ + K +++ A +LG
Sbjct: 190 TSCVSCGQCIAVCPTGALQEKDFTD--KVF-------AAIADPAKHVIVQTAPAVRAALG 240
Query: 130 AKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F V K+ K LG D V D + +++E +EFLDR +GG PL TS
Sbjct: 241 EEFGYPIGTGVEGKMVSALKMLGFDKVFDTDFSADLTIMEEAHEFLDRVQNGGVLPLITS 300
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
PGW+ Y E + + +S KSPQQ+ G++ K++ A+K G+ P I V++MPC
Sbjct: 301 CSPGWIKYCEHYFPD-MTKNLSSCKSPQQMFGAIAKSYYAQKAGIDPKDIVSVSIMPCTA 359
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK E R + G DVD +T EL ++ A D D P
Sbjct: 360 KKFEVGRD--HQAANGVPDVDIALTTRELARMIRK--AGIKFTALPDASYDSPLGLSTGA 415
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR-NPDIREATFTCGDVTLRFCI 366
+ +GG L A+ L E ++F +R I+EAT+ + ++ +
Sbjct: 416 ATIF---GATGGVMEAALRTAVETLTGEELKALDFTEVRGTAGIKEATYNVAGMDVKVAV 472
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELET-IL 425
A+G N + L+ K+K Y FIEIM CP GC+NGG Q + L +L
Sbjct: 473 ASGLNNARELLNKVKSGEASYHFIEIMGCPGGCVNGGGQPQQPGYVRDTVDIRGLRAQVL 532
Query: 426 CDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ K+ + EN ++ LY ++LG ++K H+L+TSY
Sbjct: 533 YNSDKANTIRKSHENPAIKELYASFLGEPGSEKAHHLLHTSY 574
>gi|402309362|ref|ZP_10828357.1| [FeFe] hydrogenase, group A [Eubacterium sp. AS15]
gi|400372857|gb|EJP25795.1| [FeFe] hydrogenase, group A [Eubacterium sp. AS15]
Length = 578
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 190/403 (47%), Gaps = 21/403 (5%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T C C C+ + +T+ + N H + KT+++ +A ++LG
Sbjct: 192 TTCTFCGQCLAVCPTGALTEVN----------NTPHVWDVLHSDKTVIVQVAPAVRVALG 241
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F + +V K+ K LG D + D A +++E +EF+ R +GG P+ TS
Sbjct: 242 EEFGMEPGTIVTGKMINALKYLGFDKIFDTNFAADLTIMEEASEFVHRLNNGGKLPILTS 301
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV + E +F L S KSP ++ G++ KT+LA+KL + P ++ V++MPC
Sbjct: 302 CCPSWVNFFEHQFTDF-LDIPSTCKSPHEMFGAIAKTYLAQKLNIDPKNMVLVSVMPCVA 360
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA+R + N +DVD VIT EL L+ E + D D P
Sbjct: 361 KKYEAARPELGNG--AGKDVDYVITTREL-ALMIKEAGINFGELGDDAEFDNPMGASTGA 417
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
++ +GG + A + E P +EF+ LR + I++ T +R +
Sbjct: 418 GVIF---GATGGVIEATVRTAYEWITGNELPKLEFEELRGLEGIKQTTVDIDGRPIRIAV 474
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE-KVASPKETALELETIL 425
ANG N + L+ ++ +D IE+MACP GC+ G Q ++ + ++ A +
Sbjct: 475 ANGLGNTRRLLNMIRDNEAHFDAIEVMACPGGCVGGAGQPYHKGNLDVIRKRAQGIYKAD 534
Query: 426 CDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
D + EN + LYK +LG ++K +L+TSY P+
Sbjct: 535 RDNKIRKSHENPMIIQLYKEFLGEPYSEKAHELLHTSYTARPR 577
>gi|423076298|ref|ZP_17065011.1| hydrogenase, Fe-only [Desulfitobacterium hafniense DP7]
gi|361852658|gb|EHL04881.1| hydrogenase, Fe-only [Desulfitobacterium hafniense DP7]
Length = 554
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 201/439 (45%), Gaps = 55/439 (12%)
Query: 52 IQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNE 111
IQ G E K EI C+ C CI S I++ RE+ A +
Sbjct: 125 IQSVYGNYELPIKNEIP---CINCGQCIHWCPSGAISE----------REDIDQVAKALA 171
Query: 112 NTK-TIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVEL 169
+ K T+V+ A + LG +F L V K ++LG D++ D A +++E
Sbjct: 172 DPKITVVVQTAPATRIGLGEEFGLPVGTNVQGKQVAALRKLGFDVIFDTNFAADLTIMEE 231
Query: 170 ENEFLDRF---LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHL 226
E + R L P FTS CPGWV + E + E +LP +S KSPQQ+ G+L+KT+
Sbjct: 232 GTELVKRITGELHHPLPQFTSCCPGWVKFVEYYYPE-LLPNLSSAKSPQQMAGALVKTYF 290
Query: 227 AEKLGVHPSHIYHVTLMPCYDKKLEASRAD------FYNEELGYRDVDCVITAVELEVLL 280
AEK V P I+ V +MPC KK E R + ++ +E DVD V+T EL ++
Sbjct: 291 AEKNHVEPQKIFSVAIMPCTAKKFECQRPEMISAQTYWQDEQVSPDVDVVLTTRELACMI 350
Query: 281 ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCP 334
K +D P + L+ TG+G G V+ A+R L
Sbjct: 351 ------------KRAGIDLPSLPDEEYDQLMGVATGAGAIFGTTGGVMEAAVRSAYYLVT 398
Query: 335 GESP---VVEFKPLRNPD-IREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDF 389
GE P + + P+R + ++EA + G +R + +G N + +++++K P+ F
Sbjct: 399 GEQPPAALWQLTPVRGMEGVKEAAVSIPGAGEIRIAVISGLDNARAIMEQVKAGNSPWTF 458
Query: 390 IEIMACPSGCLNGGAQIRNEKVASPKE-----TALELETILCDLAKSEPRENATLEHLYK 444
IE+MACP GC GG Q R+ A P + A L I +N ++ +Y
Sbjct: 459 IEVMACPGGCQYGGGQPRSS--APPSDGVRNTRAASLYKIDAQAKLRNSHDNPQIKQVYA 516
Query: 445 AWLGGKSTDKGKHMLNTSY 463
+L ++K + +L+T Y
Sbjct: 517 EFLTAPLSEKAEELLHTHY 535
>gi|346322395|gb|EGX91994.1| iron-sulfur cluster assembly associated protein Nar1, putative
[Cordyceps militaris CM01]
Length = 567
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 145/476 (30%), Positives = 209/476 (43%), Gaps = 95/476 (19%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQD----DGAYIQETNGREEK 61
S +L DL+DFI P CIKPI + P + + ++ DG +
Sbjct: 1 MSAILSTDDLNDFIAPGVACIKPIETLPAAAPPSSSSSSLETEVILDGDARSASA--APP 58
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHK--------------A 107
EISLTDCLACSGC+TSAE+VL++ QSH EV+ + A +
Sbjct: 59 PPPAEISLTDCLACSGCVTSAEAVLVSLQSHAEVLATLDAAPALRVLPPGPGGARYTVQG 118
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFA--LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFS 165
++N K +V S++ Q SL A +S + L + L G H
Sbjct: 119 LEHDNAKLLVASVSPQTRASLAAACGPGVSPARAGRMLESLLRG---PAGLPGGGRHGSG 175
Query: 166 LVELENEFLDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
+ + R ++ V A+++H +LP++SRVKSPQ + G+L+KT
Sbjct: 176 FAWVVDTNPARAMT------------HVLSADETH-PHVLPHLSRVKSPQALAGTLLKTS 222
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELG-------------YRDVDCVIT 272
L LG+ P I+H+ +MPC DKKLEASRA+ +E RDVDCVIT
Sbjct: 223 LGRALGIPPHRIWHLAVMPCLDKKLEASRAELTDEAWAAAAAPHADGRRRPVRDVDCVIT 282
Query: 273 AVELEVLLANE-LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG--------SGGYAHN 323
+ E+ +L + L L P+ + H+ L + SGG ++
Sbjct: 283 SKEVLMLAESRGLDFFQLARAPGPPPAAPFPDPTLHKFLFQQPSAPAHRAAGSSGGLLYH 342
Query: 324 VLSHAIRQLCPGESPVVEFKPLRNPDIREATFTC---GDVTLRFCIAN---GFRNIQNLI 377
+L Q PG + V RN D+ E T G+ + A GFRNIQNL+
Sbjct: 343 ILQARAAQ-TPGAA--VRVIQGRNADVVEYVVTVAGSGEAAVPVFKAARYYGFRNIQNLV 399
Query: 378 QKLKRKR--------------------------LPYDFIEIMACPSGCLNGGAQIR 407
++LK R L Y ++E+MACP GC NGG QI+
Sbjct: 400 RRLKPARPSRMPGGRPFGSSSARRPGGGGGASSLEYGYVEVMACPGGCTNGGGQIK 455
>gi|4927278|gb|AAD33071.1| hydrogenase-1 [Clostridium thermocellum]
Length = 579
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 182/364 (50%), Gaps = 30/364 (8%)
Query: 116 IVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFL 174
+V+ A ++LG +F + +V K+ RLG V D A +++E E +
Sbjct: 224 VVVQTAPAVRVALGEEFGMPIGSRVTGKMVAALSRLGFKKVFDTDTAADLTIMEEGTELI 283
Query: 175 DRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
+R +GG PL TS PGW+ + E ++ EF L +S KSP ++ G+++K++ A+K G+
Sbjct: 284 NRIKNGGKLPLITSCSPGWIKFCEHNYPEF-LDNLSSCKSPHEMFGAVLKSYYAQKNGID 342
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK 293
PS ++ ++MPC KK EA R + + GY DVD V+T EL ++
Sbjct: 343 PSKVFVGSIMPCTAKKFEAQRPELSS--TGYPDVDVVLTTRELARMIKE--TGIDFNSLP 398
Query: 294 DGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGE-SPVVEFKPLR 346
D D P E +G+G G V+ AIR +L G+ + +E+ +R
Sbjct: 399 DKQFDDPMGE----------ASGAGVIFGATGGVMEAAIRTVGELLSGKPADKIEYTEVR 448
Query: 347 NPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
D I+EA+ TL+ +A+G N + L+ K+K Y FIEIMACP GC+NGG Q
Sbjct: 449 GLDGIKEASIELDGFTLKAAVAHGLGNARKLLDKIKAGEADYHFIEIMACPGGCINGGGQ 508
Query: 406 -IRNEKVASPKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLN 460
I+ V + K+ E + + +S P EN ++ LY+ + G + K +L+
Sbjct: 509 PIQPSSVRNWKDIRCERAKAIYEEDESLPIRKSHENPKIKMLYEEFFGEPGSHKAHELLH 568
Query: 461 TSYH 464
T Y
Sbjct: 569 THYE 572
>gi|302833840|ref|XP_002948483.1| iron hydrogenase [Volvox carteri f. nagariensis]
gi|300266170|gb|EFJ50358.1| iron hydrogenase [Volvox carteri f. nagariensis]
Length = 497
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 190/417 (45%), Gaps = 84/417 (20%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENE 172
K ++ +A +++ F L+ +L + LG D+V D +++E E
Sbjct: 90 KVMIAQVAPAVRVAISESFGLAPGATTPGQLAESLRCLGFDMVFDTLYGADLTIMEEGTE 149
Query: 173 FLDRFLSG---------GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK 223
L R + P+FTS CPGW+ EKS+ E I PY+S KSPQ ++G+++K
Sbjct: 150 LLSRLQAQLEAHPHSEEPLPMFTSCCPGWIALLEKSYPELI-PYVSSCKSPQMMLGAMVK 208
Query: 224 THLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE 283
T+LAEK G+ PS I V++MPC K+ EA R F + G RDVD VIT EL +L
Sbjct: 209 TYLAEKKGISPSDISMVSIMPCVRKQGEADRDWFCSGGAGVRDVDHVITTAELGNILKER 268
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ----LCPGE 336
L E +G WDE L +G+G+G G V+ A+R +
Sbjct: 269 --NINLPELPEG----GWDEP------LGSGSGAGVVFGTTGGVMEAALRTAYELVTQQP 316
Query: 337 SPVVEFKPLRNPD-IRE-----------------------------------------AT 354
P + +R D I+E +
Sbjct: 317 LPRLNLSEVRGMDGIKETEIKMVPPPGSKFAELVAARAAAKAMDEAAASAGAIKWDGGSN 376
Query: 355 FTCGD----VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
FT D +TLR +ANG N + L+ K++ YDF+EIMACPSGC+ GG Q R+
Sbjct: 377 FTADDGAKGITLRVAVANGLGNAKKLLTKMQTGECKYDFVEIMACPSGCVGGGGQPRS-- 434
Query: 411 VASPKETALELETILCDLAK----SEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ K+ A++ + L DL + EN ++ Y+ +LG ++ K +L+T Y
Sbjct: 435 --TDKQVAVKRQQALYDLDERATIRRSHENPAVQKAYEDFLGEPNSHKAHDLLHTHY 489
>gi|399890389|ref|ZP_10776266.1| hydrogenase, Fe-only [Clostridium arbusti SL206]
Length = 574
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 182/387 (47%), Gaps = 25/387 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+C+ C CI + +T++SH + +K + N+ K +++++A S+G
Sbjct: 188 TNCILCGQCIIACPVAALTEKSHMDRVK---------DALNDPEKHVIVAMAPSVRASMG 238
Query: 130 AKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + V K+ ++LG + + D+ +++E E + R + G P+FTS
Sbjct: 239 ELFNMGFGVDVTGKIYTALRQLGFNKIFDINFGADMTIMEEATELVQRIKNNGPFPMFTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV AE + E +L +S KSPQQ+ G+ KT+ G+ P ++ VT+MPC
Sbjct: 299 CCPGWVRQAENYYPE-LLNNLSSAKSPQQIFGAATKTYYPSITGLDPKNVVTVTVMPCTS 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + N+ G R++D VIT EL ++ + A + +D +D E++
Sbjct: 358 KKFEADRPEMEND--GLRNIDAVITTRELAKMIKD--AKIPFAKLEDSEVDPAMGEYSGA 413
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
++ +GG L A E +E+K +R D I+EA +
Sbjct: 414 GVIF---GATGGVMEAALRSAKDFAENAELENIEYKQVRGLDGIKEAEVELAGKKYNVAV 470
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-----IRNEKVASPKETALEL 421
NG N+ ++ K Y FIE+MAC GC+NGG Q I EKV E A L
Sbjct: 471 INGASNVFKFMESGKMNEKQYHFIEVMACHGGCVNGGGQPHVKPIDLEKVDIKSERASVL 530
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLG 448
L K + N L +YK ++G
Sbjct: 531 YNQDAHLTKRKSHNNTALIKMYKDYIG 557
>gi|406698812|gb|EKD02039.1| hypothetical protein A1Q2_03739 [Trichosporon asahii var. asahii
CBS 8904]
Length = 595
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 186/390 (47%), Gaps = 64/390 (16%)
Query: 25 CIKPIPIEKPSGPRTG--------------AKIRIQDDGAYIQ---ETNGREEKLKKVEI 67
CI P+ KP+ P +I+I DD Y + + ++L K EI
Sbjct: 9 CIIPVRSSKPAAPAGSNNVSYFCYVQADAQTEIQIGDDNTYYEVSTDVAASRQQLAKAEI 68
Query: 68 SLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLS 127
+L D S + I++ + + VLS+A Q + S
Sbjct: 69 NLND-------------------STPRSLAFIKDKDPRRP---------VLSIAPQTLAS 100
Query: 128 LGAKFALSHE--QVVAKLCGFF--KRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
L A + S ++ ++ F + G VLD A +L + +EF R S
Sbjct: 101 LSAAYGGSIPLLTLLRRIRSFLSSEERGGWTVLDTTFARHLALRQSVSEFRSRQQSSQNL 160
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ S CPGWVCYAEK+ G+ +LP +S +SPQ + G+++K HLAEK G + +YHVT
Sbjct: 161 PMLASACPGWVCYAEKAQGD-LLPLLSSTRSPQAMQGAIVKRHLAEKWGKKANEVYHVTA 219
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA---TTTLQEEKDGILDW 299
MPCYDKKLEASR+DFY++ ++ DCV+T EL++LL +EL + + E D +
Sbjct: 220 MPCYDKKLEASRSDFYDDVAKTKETDCVLTTGELDLLL-SELGFDPSAPVPGEDDPVPPA 278
Query: 300 PWDEHNPH----RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATF 355
D P +L G+ SG Y +L ++ Q P + + LRN E F
Sbjct: 279 SGDYSRPDAGFPELLTHPGSSSGSYLMALLV-SLAQEHP--DAALHVRRLRNSPDNEEYF 335
Query: 356 --TCGDVTLRFCIANGFRNIQNLIQKLKRK 383
+ G V + GFRN+QNL++K+ ++
Sbjct: 336 LESGGQVLFKGARCYGFRNLQNLVRKVGKE 365
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 388 DFIEIMACPSGCLNGGAQIR 407
DF+E+MACP GC+NGG Q++
Sbjct: 428 DFVEVMACPGGCVNGGGQMK 447
>gi|331269074|ref|YP_004395566.1| hydrogenase (Fe) large chain [Clostridium botulinum BKT015925]
gi|329125624|gb|AEB75569.1| hydrogenase (Fe) large chain [Clostridium botulinum BKT015925]
Length = 441
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 174/362 (48%), Gaps = 20/362 (5%)
Query: 110 NENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVE 168
N+ K I+ +A +LG F L +V KL + LG D V D A ++VE
Sbjct: 90 NKKNKLIIAQVAPSIRATLGEYFGLEPGTLVTGKLVSALRALGFDKVFDTDFAADLTIVE 149
Query: 169 LENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHL 226
EF+ R + G P+ TS CPGW+ + E + +P S KSPQQ+ G++ KT+L
Sbjct: 150 EATEFVHRLKNKGKLPILTSCCPGWINFFEHDFNDLADIP--STCKSPQQMFGTIAKTYL 207
Query: 227 AEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELA 285
A K+ ++P I V +MPC KK EA+R + G RDVD VI+ EL E++ NE+
Sbjct: 208 ANKMNINPDDIIVVAVMPCLAKKYEAARPEMTTN--GIRDVDIVISTKELAELIKENEID 265
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPL 345
+L+ ++ D P E + SGG A + A L P+ EFK
Sbjct: 266 FVSLENDE---FDNPLGESTGAGTIF---GASGGVAEAAIRTAYELLTKKSIPIFEFKET 319
Query: 346 RNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
R + I+EA ++ IANG + + ++ +K Y IEIMAC GC+ G
Sbjct: 320 RGLEGIKEAEININGEIIKIAIANGLDSARKVLCSIKAGEKNYHIIEIMACQGGCIGSGL 379
Query: 405 Q---IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
Q +++ + + AL LE L KS EN + +YK +LG K L+T
Sbjct: 380 QPFMKKHQSIIEKRSEALYLEDRNKPLRKS--HENPYVLKIYKEFLGEPFGKKAHEFLHT 437
Query: 462 SY 463
+Y
Sbjct: 438 TY 439
>gi|50953715|gb|AAT90438.1| plastid FeFe-hydrogenase precursor [Chlamydomonas moewusii]
Length = 458
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 189/382 (49%), Gaps = 59/382 (15%)
Query: 118 LSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF 177
+ +AI L L A A++ Q+VA L +RLG V D +A +++E E L R
Sbjct: 88 VRVAISEALGL-APGAVTPGQLVAGL----RRLGFTKVFDTNLAADLTIMEEGTELLHRL 142
Query: 178 ---LSGGG------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
L G P+FTS CPGW+ EKS+ E I PY+S KSPQ +MG++IK AE
Sbjct: 143 ADHLEGHPKQEEPMPMFTSCCPGWIQMVEKSYPELI-PYLSSCKSPQMMMGAVIKNFFAE 201
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATT 287
+ GV P I ++MPC K+ EA R G RDVD VIT VEL +L + T
Sbjct: 202 EAGVKPGDIISCSVMPCVRKQGEADRPMMTTTAEG-RDVDHVITTVELAQMLTERGIDLT 260
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGESPV-- 339
+L +E+ D P L G+G G G V+ A+R +L G+ P+
Sbjct: 261 SLPDEE---FDCP----------LGIGSGGGQLFGTTGGVMEAALRTVVELVSGQ-PMGR 306
Query: 340 VEFKPLRNPD-IREATFTC---------------GDVTLRFCIANGFRNIQNLIQKLKRK 383
+ F+ +R + I+ AT T + +R +ANG N + LI ++K
Sbjct: 307 IVFEDVRGLEGIKAATITLQPAANSPFAKYNPEGKGLDVRIAVANGLGNAKKLITEMKAG 366
Query: 384 RLPYDFIEIMACPSGCLNGGAQIR--NEKVASPKETALELETILCDLAKSEPRENATLEH 441
YDFIE+MACPSGC+ GG Q R ++++ ++ A+ + +S EN +
Sbjct: 367 TSKYDFIEVMACPSGCIGGGGQPRSADKQILQKRQQAIYTLDERAVIRRSH--ENPIIAA 424
Query: 442 LYKAWLGGKSTDKGKHMLNTSY 463
LYK WL ++ H+L+T Y
Sbjct: 425 LYKRWLQEPCSETAHHLLHTHY 446
>gi|89897458|ref|YP_520945.1| hydrogenase large subunit [Desulfitobacterium hafniense Y51]
gi|89336906|dbj|BAE86501.1| putative hydrogenase large subunit [Desulfitobacterium hafniense
Y51]
Length = 555
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 201/439 (45%), Gaps = 55/439 (12%)
Query: 52 IQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNE 111
IQ G E K EI C+ C CI S I++ RE+ A +
Sbjct: 126 IQSVYGNYELPLKNEIP---CINCGQCIHWCPSGAISE----------REDIDQVAKALA 172
Query: 112 NTK-TIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVEL 169
+ K T+V+ A + LG +F L V K ++LG D++ D A +++E
Sbjct: 173 DPKITVVVQTAPATRIGLGEEFGLPVGTNVQGKQVAALRKLGFDVIFDTNFAADLTIMEE 232
Query: 170 ENEFLDRF---LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHL 226
E + R L P FTS CPGWV + E + E +LP +S KSPQQ+ G+L+KT+
Sbjct: 233 GTELVKRITGELHHPLPQFTSCCPGWVKFVEYYYPE-LLPNLSSAKSPQQMAGALVKTYF 291
Query: 227 AEKLGVHPSHIYHVTLMPCYDKKLEASRAD------FYNEELGYRDVDCVITAVELEVLL 280
AEK V P I+ V +MPC KK E R + ++ +E DVD V+T EL ++
Sbjct: 292 AEKNHVEPQKIFSVAIMPCTAKKFECQRPEMISAQTYWQDEQVSPDVDVVLTTRELARMI 351
Query: 281 ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCP 334
K +D P + L+ TG+G G V+ A+R L
Sbjct: 352 ------------KRAGIDLPSLPDEEYDQLMGVATGAGAIFGTTGGVMEAAVRSAYYLVT 399
Query: 335 GESP---VVEFKPLRNPD-IREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDF 389
GE P + + P+R + ++EA + G +R + +G N + +++++K P+ F
Sbjct: 400 GEQPPAALWQLTPVRGMEGVKEAAVSIPGAGEIRIAVISGLDNARAIMEQVKAGNSPWTF 459
Query: 390 IEIMACPSGCLNGGAQIRNEKVASPKE-----TALELETILCDLAKSEPRENATLEHLYK 444
IE+MACP GC GG Q R+ A P + A L I +N ++ +Y
Sbjct: 460 IEVMACPGGCQYGGGQPRSS--APPSDGVRNTRAASLYKIDAQAKLRNSHDNPQIKQVYA 517
Query: 445 AWLGGKSTDKGKHMLNTSY 463
+L ++K + +L+T Y
Sbjct: 518 EFLTAPLSEKAEELLHTHY 536
>gi|219670623|ref|YP_002461058.1| hydrogenase, Fe-only [Desulfitobacterium hafniense DCB-2]
gi|219540883|gb|ACL22622.1| hydrogenase, Fe-only [Desulfitobacterium hafniense DCB-2]
Length = 527
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 201/439 (45%), Gaps = 55/439 (12%)
Query: 52 IQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNE 111
IQ G E K EI C+ C CI S I++ RE+ A +
Sbjct: 98 IQSVYGNYELPLKNEIP---CINCGQCIHWCPSGAISE----------REDIDQVAKALA 144
Query: 112 NTK-TIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVEL 169
+ K T+V+ A + LG +F L V K ++LG D++ D A +++E
Sbjct: 145 DPKITVVVQTAPATRIGLGEEFGLPVGTNVQGKQVAALRKLGFDVIFDTNFAADLTIMEE 204
Query: 170 ENEFLDRF---LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHL 226
E + R L P FTS CPGWV + E + E +LP +S KSPQQ+ G+L+KT+
Sbjct: 205 GTELVKRITGELHHPLPQFTSCCPGWVKFVEYYYPE-LLPNLSSAKSPQQMAGALVKTYF 263
Query: 227 AEKLGVHPSHIYHVTLMPCYDKKLEASRAD------FYNEELGYRDVDCVITAVELEVLL 280
AEK V P I+ V +MPC KK E R + ++ +E DVD V+T EL ++
Sbjct: 264 AEKNHVEPQKIFSVAIMPCTAKKFECQRPEMISAQTYWQDEQVSPDVDVVLTTRELARMI 323
Query: 281 ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCP 334
K +D P + L+ TG+G G V+ A+R L
Sbjct: 324 ------------KRAGIDLPSLPDEEYDQLMGVATGAGAIFGTTGGVMEAAVRSAYYLVT 371
Query: 335 GESP---VVEFKPLRNPD-IREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDF 389
GE P + + P+R + ++EA + G +R + +G N + +++++K P+ F
Sbjct: 372 GEQPPAALWQLTPVRGMEGVKEAAVSIPGAGEIRIAVISGLDNARAIMEQVKAGNSPWTF 431
Query: 390 IEIMACPSGCLNGGAQIRNEKVASPKE-----TALELETILCDLAKSEPRENATLEHLYK 444
IE+MACP GC GG Q R+ A P + A L I +N ++ +Y
Sbjct: 432 IEVMACPGGCQYGGGQPRSS--APPSDGVRNTRAASLYKIDAQAKLRNSHDNPQIKQVYA 489
Query: 445 AWLGGKSTDKGKHMLNTSY 463
+L ++K + +L+T Y
Sbjct: 490 EFLTSPLSEKAEELLHTHY 508
>gi|158320026|ref|YP_001512533.1| hydrogenase, Fe-only [Alkaliphilus oremlandii OhILAs]
gi|158140225|gb|ABW18537.1| hydrogenase, Fe-only [Alkaliphilus oremlandii OhILAs]
Length = 567
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 179/350 (51%), Gaps = 33/350 (9%)
Query: 66 EISLTDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+I+ +C+ C C + +I + ++ V +V+ N+ +K ++ +A
Sbjct: 183 DIAEVNCVNCGQCRNVCPTGAIIIKNENDRVWEVV----------NDRSKRVIAQVAPAV 232
Query: 125 VLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
++LG +F L +V + K+ K +G+D V D A +++E EF++R G
Sbjct: 233 RVALGEEFGLEPGEVTIGKIVAALKAIGIDEVYDTAFAADMTVIEESKEFMERLSLGEDL 292
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA-EKLGVHPSHIYHVT 241
PLFTS CPGWV +AE + ++ ++S KSPQQ+ G+++K + EK ++
Sbjct: 293 PLFTSCCPGWVKFAENKFPD-MMDHVSSCKSPQQMFGAVLKEYYKNEKNNAEGKETVVIS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA+R +F E+ G RDVD VIT EL +L+ A + ++ D P+
Sbjct: 352 VMPCTAKKAEAAREEF--EQEGIRDVDFVITTQELALLIKE--AGIIFHQLEEESFDMPF 407
Query: 302 DEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATF 355
L +G+G +GG V++ ++ + + FK +R +++EA F
Sbjct: 408 G--------LASGSGIIFGATGGVTEAVVTRLLKDKPDHSTKDILFKEVRGLENLKEAVF 459
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
++ I +G +N LI+++K YDFIE+MACP GC+ GG Q
Sbjct: 460 NVDGKEVKVAIVHGLKNTDELIKQIKAGERYYDFIEVMACPGGCVAGGGQ 509
>gi|355628603|ref|ZP_09049864.1| hypothetical protein HMPREF1020_03943 [Clostridium sp. 7_3_54FAA]
gi|354819674|gb|EHF04113.1| hypothetical protein HMPREF1020_03943 [Clostridium sp. 7_3_54FAA]
Length = 582
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 185/402 (46%), Gaps = 25/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T C++C CI + + ++ + KV A+ + K +++ A +LG
Sbjct: 190 TSCVSCGQCIAVCPTGALQEKDFTD--KVF-------AAIADPAKHVIVQTAPAVRAALG 240
Query: 130 AKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F + K+ K LG D V D + +++E +EFLDR +GG PL TS
Sbjct: 241 EEFGYPIGTGLEGKMVSALKMLGFDKVFDTDFSADLTIMEEAHEFLDRVQNGGVLPLITS 300
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
PGW+ Y E + + +S KSPQQ+ G++ K++ A+K G+ P I V++MPC
Sbjct: 301 CSPGWIKYCEHYFPD-MTKNLSSCKSPQQMFGAIAKSYYAQKAGIDPKDIVSVSIMPCTA 359
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK E R + G DVD +T EL ++ A D D P
Sbjct: 360 KKFEVGRD--HQAANGVPDVDIALTTRELARMIRK--AGIKFTALPDASYDSPLGLSTGA 415
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR-NPDIREATFTCGDVTLRFCI 366
+ +GG L A+ L E ++F +R I+EAT+ + ++ +
Sbjct: 416 ATIF---GATGGVMEAALRTAVETLTGEELKALDFAEVRGTAGIKEATYNVAGMDVKVAV 472
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELET-IL 425
A+G N + L+ K+K Y FIEIM CP GC+NGG Q + L +L
Sbjct: 473 ASGLNNARELLNKVKSGEASYHFIEIMGCPGGCVNGGGQPQQPGYVRDTVDIRGLRAQVL 532
Query: 426 CDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ K+ + EN ++ LY ++LG ++K H+L+TSY
Sbjct: 533 YNSDKANTIRKSHENPAIKELYASFLGEPGSEKAHHLLHTSY 574
>gi|302833848|ref|XP_002948487.1| iron hydrogenase [Volvox carteri f. nagariensis]
gi|300266174|gb|EFJ50362.1| iron hydrogenase [Volvox carteri f. nagariensis]
Length = 419
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 175/384 (45%), Gaps = 73/384 (19%)
Query: 141 AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---------GGPLFTSECPG 191
+L +RLG DLV D +++E E + R + P+FTS CPG
Sbjct: 40 GQLAESLRRLGFDLVFDTLYGADLTIMEEGTELIHRLQAQLEAHPHSEEPLPMFTSCCPG 99
Query: 192 WVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLE 251
W+ EKS+ E I PY+S KSPQ ++G+++KT+LAEK G+ PS I V++MPC K+ E
Sbjct: 100 WIALLEKSYPELI-PYVSSCKSPQMMLGAMVKTYLAEKKGISPSDISMVSIMPCVRKQGE 158
Query: 252 ASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLL 311
A R F + G RDVD VIT EL +L L E +G D P + ++
Sbjct: 159 ADRDWFCSGGAGVRDVDHVITTAELGNILKER--NINLPELPEGYWDQPLGTGSGAGVIF 216
Query: 312 VNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IRE------------------ 352
GT +GG L A + P + +R D I+E
Sbjct: 217 --GT-TGGVMEAALRTAYELVTQQPLPRLNLSEVRGMDGIKETEIKMVPPPGSKFAELVA 273
Query: 353 -----------------------ATFTCGD----VTLRFCIANGFRNIQNLIQKLKRKRL 385
+ FT D +TLR +ANG N + L+ K++
Sbjct: 274 ARAAAKAMDEAAASAGAIKWDGGSNFTADDGANGITLRVAVANGLGNAKKLLTKMQTGEC 333
Query: 386 PYDFIEIMACPSGCLNGGAQIR--NEKVASPKETAL----ELETILCDLAKSEPRENATL 439
YDF+EIMACPSGC+ GG Q R ++++ + ++ AL E TI EN +
Sbjct: 334 KYDFVEIMACPSGCVGGGGQPRSTDKQITAKRQQALYNLDERSTI------RRSHENPAI 387
Query: 440 EHLYKAWLGGKSTDKGKHMLNTSY 463
+ YK +LG + + +L+T Y
Sbjct: 388 QTAYKDFLGEPNGPRAHDLLHTHY 411
>gi|160881923|ref|YP_001560891.1| hydrogenase, Fe-only [Clostridium phytofermentans ISDg]
gi|160430589|gb|ABX44152.1| hydrogenase, Fe-only [Clostridium phytofermentans ISDg]
Length = 582
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 190/406 (46%), Gaps = 32/406 (7%)
Query: 70 TDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C++C CI + L + S + V++ I + K + + A L
Sbjct: 190 TSCVSCGQCIAVCPTGALYEKDSIDAVLEAIADPE----------KFVFVQTAPAVRAGL 239
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F L V K+ +R+G D V D + +++E EFLDR +GG PL T
Sbjct: 240 GEAFGLPIGTNVEGKMVAALRRIGFDKVFDTNFSADLTIMEEATEFLDRVQNGGVLPLIT 299
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ Y E + + +S KSPQQ+ G++ KT+ AEKLG+ P+ + V++MPC
Sbjct: 300 SCSPGWIKYCEHYFPD-MTENLSSCKSPQQMFGAIAKTYYAEKLGIDPAKMVSVSIMPCT 358
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWPWDEHN 305
KK E R D G DVD +T E L+ L +L +E+ D P
Sbjct: 359 AKKFELGRDD--QSAAGVPDVDYSLTVREFARLIDKVGLKFLSLPDEQ---YDNPLGIST 413
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCP--GESPVVEFKPLRN-PDIREATFTCGDVTL 362
++ +GG L A+ +L +SP+ EF +R I+EATF + +
Sbjct: 414 GAAVIF---GATGGVMEAALRTAVWKLTGENSDSPI-EFNEVRGVQGIKEATFQVAGMDV 469
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR-NEKVASPKETALEL 421
+A+G N + L++K+K Y FIEIM CP GC+NGG Q + V + +
Sbjct: 470 NVAVASGLSNARELLEKVKSGEANYHFIEIMGCPGGCVNGGGQPQVPASVRNFTDIRALR 529
Query: 422 ETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L D + P EN ++ +Y +LG + K +L+T+Y
Sbjct: 530 AKVLYDSDAANPLRMSHENEAVKMVYDEFLGAPGSHKAHDILHTTY 575
>gi|237734758|ref|ZP_04565239.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229382086|gb|EEO32177.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 577
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 195/402 (48%), Gaps = 25/402 (6%)
Query: 71 DCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
+C+ C CI + Q EEV VI A+ N+++K +V+ A SLG
Sbjct: 185 NCMQCGQCINVCPVGAL--QEKEEVHNVI-------AALNDDSKHVVVQTAPAVRASLGE 235
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F + +V K+ K +G D V D +++E EF+ R + G P+ TS
Sbjct: 236 EFGMPIGTRVTGKMVHALKLMGFDRVYDTNFGADLTIMEEGYEFIHRISNDGVLPMITSC 295
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGWV Y E + E +L ++S KSP ++GS+IK++ A++ + P IY V++MPC K
Sbjct: 296 SPGWVNYIEHEYPE-LLDHLSSCKSPHMMLGSMIKSYYAKENNLDPKDIYVVSIMPCVAK 354
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K E R + N G +DVD V+T EL L+ ++ ++ KD D+ D +
Sbjct: 355 KGEKEREE--NLTDGLKDVDAVLTTRELGKLI--KMFGINFRDLKDE--DFDQDMFGEYT 408
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIA 367
V SGG L L + +++ +R + ++EA+ GD+T+ +A
Sbjct: 409 GAGVIFGASGGVMEAALRTVTDVLTKEDLTNLDYHAVRGEEGVKEASLKIGDMTVNVAVA 468
Query: 368 NGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNEKVASPKETALEL 421
+ + L++++K Y FIEIM CP GC+NGG Q RN + A L
Sbjct: 469 HSMVLAKPLLEEIKNGTSKYHFIEIMGCPGGCVNGGGQSYVNALTRNSGFDWKQARAKAL 528
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L + +N+ ++ LY +LG +++K H+L+T Y
Sbjct: 529 YDEDLALPVRKSHKNSQIQKLYADFLGEPNSEKAHHLLHTHY 570
>gi|365831422|ref|ZP_09372974.1| hydrogenase, Fe-only [Coprobacillus sp. 3_3_56FAA]
gi|365261899|gb|EHM91800.1| hydrogenase, Fe-only [Coprobacillus sp. 3_3_56FAA]
Length = 582
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 195/402 (48%), Gaps = 25/402 (6%)
Query: 71 DCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
+C+ C CI + Q EEV VI A+ N+++K +V+ A SLG
Sbjct: 190 NCMQCGQCINVCPVGAL--QEKEEVHNVI-------AALNDDSKHVVVQTAPAVRASLGE 240
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F + +V K+ K +G D V D +++E EF+ R + G P+ TS
Sbjct: 241 EFGMPIGTRVTGKMVHALKLMGFDRVYDTNFGADLTIMEEGYEFIHRISNDGVLPMITSC 300
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGWV Y E + E +L ++S KSP ++GS+IK++ A++ + P IY V++MPC K
Sbjct: 301 SPGWVNYIEHEYPE-LLDHLSSCKSPHMMLGSMIKSYYAKENNLDPKDIYVVSIMPCVAK 359
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K E R + N G +DVD V+T EL L+ ++ ++ KD D+ D +
Sbjct: 360 KGEKEREE--NLTDGLKDVDAVLTTRELGKLI--KMFGINFRDLKDE--DFDQDMFGEYT 413
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIA 367
V SGG L L + +++ +R + ++EA+ GD+T+ +A
Sbjct: 414 GAGVIFGASGGVMEAALRTVTDVLTKEDLTNLDYHAVRGEEEVKEASLKIGDMTVNVAVA 473
Query: 368 NGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNEKVASPKETALEL 421
+ + L++++K Y FIEIM CP GC+NGG Q RN + A L
Sbjct: 474 HSMVLAKPLLEEIKNGTSKYHFIEIMGCPGGCVNGGGQSYVNALTRNSGFDWKQARAKAL 533
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L + +N+ ++ LY +LG +++K H+L+T Y
Sbjct: 534 YDEDLALPVRKSHKNSQIQKLYADFLGEPNSEKAHHLLHTHY 575
>gi|167755791|ref|ZP_02427918.1| hypothetical protein CLORAM_01306 [Clostridium ramosum DSM 1402]
gi|374625084|ref|ZP_09697501.1| hydrogenase, Fe-only [Coprobacillus sp. 8_2_54BFAA]
gi|167704730|gb|EDS19309.1| hydrogenase, Fe-only [Clostridium ramosum DSM 1402]
gi|373916367|gb|EHQ48115.1| hydrogenase, Fe-only [Coprobacillus sp. 8_2_54BFAA]
Length = 582
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 195/402 (48%), Gaps = 25/402 (6%)
Query: 71 DCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
+C+ C CI + Q EEV VI A+ N+++K +V+ A SLG
Sbjct: 190 NCMQCGQCINVCPVGAL--QEKEEVHNVI-------AALNDDSKHVVVQTAPAVRASLGE 240
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F + +V K+ K +G D V D +++E EF+ R + G P+ TS
Sbjct: 241 EFGMPIGTRVTGKMVHALKLMGFDRVYDTNFGADLTIMEEGYEFIHRISNDGVLPMITSC 300
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGWV Y E + E +L ++S KSP ++GS+IK++ A++ + P IY V++MPC K
Sbjct: 301 SPGWVNYIEHEYPE-LLDHLSSCKSPHMMLGSMIKSYYAKENNLDPKDIYVVSIMPCVAK 359
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K E R + N G +DVD V+T EL L+ ++ ++ KD D+ D +
Sbjct: 360 KGEKEREE--NLTDGLKDVDAVLTTRELGKLI--KMFGINFRDLKDE--DFDQDMFGEYT 413
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIA 367
V SGG L L + +++ +R + ++EA+ GD+T+ +A
Sbjct: 414 GAGVIFGASGGVMEAALRTVTDVLTKEDLTNLDYHAVRGEEGVKEASLKIGDMTVNVAVA 473
Query: 368 NGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNEKVASPKETALEL 421
+ + L++++K Y FIEIM CP GC+NGG Q RN + A L
Sbjct: 474 HSMVLAKPLLEEIKNGTSKYHFIEIMGCPGGCVNGGGQSYVNALTRNSGFDWKQARAKAL 533
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L + +N+ ++ LY +LG +++K H+L+T Y
Sbjct: 534 YDEDLALPVRKSHKNSQIQKLYADFLGEPNSEKAHHLLHTHY 575
>gi|303257906|ref|ZP_07343915.1| [Fe] hydrogenase gamma [Burkholderiales bacterium 1_1_47]
gi|331000429|ref|ZP_08324104.1| putative ferredoxin hydrogenase HydA1 [Parasutterella
excrementihominis YIT 11859]
gi|302859249|gb|EFL82331.1| [Fe] hydrogenase gamma [Burkholderiales bacterium 1_1_47]
gi|329571761|gb|EGG53441.1| putative ferredoxin hydrogenase HydA1 [Parasutterella
excrementihominis YIT 11859]
Length = 597
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 187/412 (45%), Gaps = 28/412 (6%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
+ T C+ C CI + ++ +N KA ++++ + P +
Sbjct: 189 VDSTKCVRCGQCIMVCPT-----------GALMSTDNVDKAREILEDESVISVVQFAPSV 237
Query: 127 --SLGAKFA-LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG F LS V ++ K +G + VLD + ++E E L+R
Sbjct: 238 RATLGDAFGTLSGTNVEKRIIAGLKMMGANYVLDTNFSADVVIMEEGTELLNRIKDKHSV 297
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + E+ E +L ++S +SPQ V+ SL KT L EK+G PS I ++
Sbjct: 298 MPMFTSCCPGWVSFVEQHRPE-MLDHLSTTRSPQAVLSSLAKTWLPEKIGAEPSKIRVIS 356
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK+EA R + G D D V+T EL L + L+E +DG D P+
Sbjct: 357 IMPCTAKKIEAGRPQLAKD--GVPDTDLVLTVRELARLFKSR--GIDLKEIEDGEFDTPF 412
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI-REATFTCGDV 360
++ SGG A L E V FKP +P + +EA G V
Sbjct: 413 MSRGSGAGVIFG--KSGGVAEAASRTLYHVLTGKEVNNVPFKPSNHPHVYKEADMDEGGV 470
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKET 417
L+ + G N + ++ Y+FIE+M CP GC+NGG IR N A+ K
Sbjct: 471 KLKIAVVYGLANANKICDEVAAGTCDYNFIEVMTCPGGCVNGGGTIRFRGNYLNATSKRF 530
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
+ LE + + N ++ LY +LG ++ K +L+TSY + K
Sbjct: 531 EV-LERADENSPVRQSHNNPMVKELYDEFLGEPNSHKAHQLLHTSYDDRSKT 581
>gi|317472987|ref|ZP_07932290.1| iron only hydrogenase large subunit domain-containing protein
[Anaerostipes sp. 3_2_56FAA]
gi|316899532|gb|EFV21543.1| iron only hydrogenase large subunit domain-containing protein
[Anaerostipes sp. 3_2_56FAA]
Length = 572
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 202/413 (48%), Gaps = 37/413 (8%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I + DC C CIT + ++ ++ A +EN K +V +A
Sbjct: 182 DIRVADCSLCGQCITHCPVGALRERDDTSML--------FSALEDEN-KIVVAQIAPAVR 232
Query: 126 LSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG--- 181
+ + LS E+ V K+ F+R+G+D V D + +++E +EF+ R G
Sbjct: 233 AAWAEQLGLSREEAPVEKIVTAFRRMGIDYVFDTTFSADLTIMEEGSEFVKRLQDGDLEE 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + + + I +S KSPQQ+ G+++KT+ A+KLGV P I+ ++
Sbjct: 293 YPMFTSCCPGWVRFIKTQFPDMI-GRLSTAKSPQQMFGAVMKTYFAKKLGVDPERIFTLS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK E FY E G+ D+DCV+T EL+ +L E LQ + G D P+
Sbjct: 352 IMPCLAKKAEREMDLFYEEYAGH-DIDCVLTTRELDRMLRAE--HLNLQFLEKGEFDSPF 408
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESP----VVEFKPLRNPDIR 351
+ GTG+G G V+ A+R L GE+P E + ++
Sbjct: 409 E----------TGTGAGVIFGATGGVMEAALRSAYFLVTGENPDADAFREIRGVKRQGWT 458
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
EA F +R + +G N +NL++ ++RK + Y+F+E+MACP GC GG Q ++
Sbjct: 459 EAEFDVAGNVIRVAVVSGLGNTRNLMEAIRRKEVKYEFVEVMACPGGCAGGGGQPIHDGQ 518
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
+E L + D +N +++LY+ + + + +L+T +
Sbjct: 519 ELAEERGSSLYFLDRDTEIRFSHDNPDIQNLYEEFFEKPLSHRAHQLLHTEHQ 571
>gi|410464900|ref|ZP_11318286.1| hydrogenase, Fe-only, partial [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409981979|gb|EKO38482.1| hydrogenase, Fe-only, partial [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 508
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 168/337 (49%), Gaps = 24/337 (7%)
Query: 71 DCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
+C+ C C + L+ + +EV+ A+ + TKT+V +A + LG
Sbjct: 191 ECVGCGQCANVCPTGALVPRSEMDEVL----------AALADPTKTVVAQVAPAVRVGLG 240
Query: 130 AKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
FA + + ++ ++ KRLG D V D A +++E EFL R +G P FTS
Sbjct: 241 ECFASPAGDPIMGRMVAALKRLGFDAVYDTTFAADLTVIEEGQEFLTRAAAGEKLPQFTS 300
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV +AE+S E +L +S +SPQQ+ GSL+K L EK G+ + V++MPC
Sbjct: 301 CCPGWVQFAEQSFPE-LLKNLSSCRSPQQMFGSLVKEMLPEKQGIARKDLIVVSIMPCTA 359
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWDEHNP 306
KK EA R +F + G DVD V+T EL ++ L L+ E LD P+
Sbjct: 360 KKFEARRPEFAVD--GSPDVDFVLTTQELARMIDGAGLRFNALEPES---LDMPFGFGTG 414
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR-NPDIREATFTCGDVTLRFC 365
++ SGG VL A ++ V+F +R + +REAT G TLR
Sbjct: 415 AGVIF---GASGGVTEAVLRFAAEKITGKPLASVDFAAVRGDSGLREATLEVGGKTLRLA 471
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNG 402
I +G N + + +++ YD IE+MACP GC+ G
Sbjct: 472 IVHGLANARAVAEQVVAGTSEYDLIEVMACPGGCIGG 508
>gi|383791573|ref|YP_005476147.1| hydrogenase, Fe-only [Spirochaeta africana DSM 8902]
gi|383108107|gb|AFG38440.1| hydrogenase, Fe-only [Spirochaeta africana DSM 8902]
Length = 582
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 199/426 (46%), Gaps = 54/426 (12%)
Query: 65 VEISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
V+++ + C+ C C I ++ + ++ IR+ H + + +A
Sbjct: 184 VQLNDSPCIKCGQCSAHCPVGAIYERDDTKSLLNAIRDPEMH----------VAVQIAPA 233
Query: 124 PVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
++LG F L ++ K+ +RLGVD V D A +++E EF++R +GG
Sbjct: 234 VRVALGEAFGLEPGEITTGKIYAALRRLGVDAVFDTNFAADLTIMEEGTEFVERLTTGGE 293
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
PL TS CP WV Y EK + + I P S KSP + G L KT+ A++ + I+
Sbjct: 294 LPLITSCCPSWVDYMEKYYDDMI-PNFSTAKSPMMMQGVLTKTYYADQKKLGRERIFSAA 352
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI--LDW 299
+MPC KK E +R D G +DVDCV+T EL LL ++ GI L
Sbjct: 353 IMPCTSKKYEITR-DVNMFASGSQDVDCVLTTRELARLL-----------KQSGIDFLSL 400
Query: 300 PWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREA 353
P DE + G G +GG L A + E + F+ +R D IR A
Sbjct: 401 P-DEEADSPIGAYTGAGTIFGATGGVMEAALRTAYNLVTGEEHKGITFEAVRGMDGIRSA 459
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKR-----KRLPYDFIEIMACPSGCLNGGAQ--- 405
++R IA+G N+++L++++K+ K PY FIE+MAC GC+ GG Q
Sbjct: 460 EIAINGKSIRVAIAHGIANVRDLLEEIKQAKAEGKEPPYHFIEVMACRGGCIAGGGQPYG 519
Query: 406 ----IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
+R +++A + E +T+ C +N ++ +YK +L + K +L+T
Sbjct: 520 TQDDVREKRIAGIYQDD-EKQTMRCS------HQNPFIQEVYKNFLEKPCSKKSHDLLHT 572
Query: 462 SYHNIP 467
Y + P
Sbjct: 573 HYTSRP 578
>gi|169351249|ref|ZP_02868187.1| hypothetical protein CLOSPI_02028 [Clostridium spiroforme DSM 1552]
gi|169292311|gb|EDS74444.1| hydrogenase, Fe-only [Clostridium spiroforme DSM 1552]
Length = 582
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 195/403 (48%), Gaps = 25/403 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
+C+ C CI + ++ EEV VI A+ N+ TK +++ A SLG
Sbjct: 189 VNCMQCGQCINVCPVGALHEK--EEVHDVI-------AALNDPTKHVIVQTAPAVRASLG 239
Query: 130 AKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F + +V K+ K +G D V D +++E +EF+ R + G P+ TS
Sbjct: 240 EEFGMPIGTRVTGKMVHALKLMGFDKVYDTNFGADLTIMEEGHEFISRIQNNGVLPMITS 299
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
PGWV Y E + E +L ++S KSP ++G+++K++ A++ + P IY V++MPC
Sbjct: 300 CSPGWVNYIEHEYPE-LLDHLSSCKSPHMMLGAMLKSYYAKENNIDPKDIYVVSIMPCVA 358
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK E R + N G +DVD V+T EL L+ ++ ++ KD D+ D +
Sbjct: 359 KKGEKEREE--NLTDGLKDVDSVLTTRELGKLI--KMFGINFKDLKDE--DFDQDMFGEY 412
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
V SGG L + L + +++ +R + ++EA+ GD+T+ +
Sbjct: 413 TGAGVIFGASGGVMEAALRTVVDVLTKKDLTNLDYHAVRGEEGVKEASIKIGDLTVNVAV 472
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNEKVASPKETALE 420
A+ + L+ +K Y FIEIM CP GC+NGG Q RN + A
Sbjct: 473 AHSMTLAKPLLDDIKNGTSKYHFIEIMGCPGGCVNGGGQSYINALTRNSGFDWKQARAKA 532
Query: 421 LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L L + +N+ ++ LY +LG +++K H+L+T Y
Sbjct: 533 LYDEDLSLPVRKSHKNSQIQKLYADFLGEPNSEKAHHLLHTHY 575
>gi|317057597|ref|YP_004106064.1| hydrogenase, Fe-only [Ruminococcus albus 7]
gi|315449866|gb|ADU23430.1| hydrogenase, Fe-only [Ruminococcus albus 7]
Length = 580
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 201/412 (48%), Gaps = 40/412 (9%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEE-VMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++ T C+ C CI S +T++S E+ V I + K +V A
Sbjct: 186 LASTACVGCGQCIVSCPVGALTEKSSEKKVWDAIADPE----------KKVVFFTAPSIR 235
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+LG +F V K+ +RLG + ++ + +++E NE ++R + G P
Sbjct: 236 ATLGEEFGNPVGTNVEGKMVAAIRRLGDVNIFNMDVTADLTIMEEANELIERIQNKGTLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CPGWV + E + +F LP++S KSPQQ+ G+L+K++ +K G+ P +++ V+++
Sbjct: 296 MFTSCCPGWVKFCEHFYPDF-LPHLSSCKSPQQMFGALLKSYYCQKNGIDPKNLFVVSVI 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWD 302
PC KK E +R + N + Y DVD +T EL ++ + L +EK D P++
Sbjct: 355 PCTAKKFEVTREEQRNGD--YDDVDVALTTRELGRMIREAGIDFNALPDEK---FDDPFE 409
Query: 303 EHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFT 356
+ +G G +GG L A +L G+ +EF +R ++EAT+T
Sbjct: 410 --------IASGAGAIFGATGGVMEAALRTAAVKL-DGKCEPLEFHDVRGTKGLKEATYT 460
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPK 415
G VT++ +A+G N + +I + Y F+EIMACP GC+NGG Q ++++ V +
Sbjct: 461 VGGVTVKVAVASGLANAREIIDGILSGERDYQFVEIMACPGGCINGGGQPVQSDAVRNFV 520
Query: 416 ETALELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ L D S E+ + LYK + L+T+Y
Sbjct: 521 DLKAIRAKALYDADSSMKLRMSHESPVCDMLYKEFFEAPGAHNAHKYLHTTY 572
>gi|156839170|ref|XP_001643279.1| hypothetical protein Kpol_1015p11 [Vanderwaltozyma polyspora DSM
70294]
gi|259511274|sp|A7TQP0.1|NAR1_VANPO RecName: Full=Cytosolic Fe-S cluster assembly factor NAR1; AltName:
Full=Nuclear architecture-related protein 1
gi|156113882|gb|EDO15421.1| hypothetical protein Kpol_1015p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 524
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 228/510 (44%), Gaps = 128/510 (25%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
S +L+ DL+DFI P CIKP+ S P G DG + G+E + KV
Sbjct: 1 MSALLREEDLNDFITPEVACIKPVS----SKPSNGV------DGEL---SVGKEPE--KV 45
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
EISL DCLAC GCITS+E +L+++Q+ + +K E + T+ +LS++I P
Sbjct: 46 EISLADCLACVGCITSSEEILLSRQNQDVFVKEWNE---------KKTEGYILSVSIAPQ 96
Query: 126 --LSLGAKFALSHEQVVAKLCGFFKRL-----GVDLVLDVGIAHCFSLVELENEFLDRFL 178
+SL F + V K F R G V+ + S ++L NE D+
Sbjct: 97 CRVSLSQYFGMG----VLKFDQMFIRYLQEVWGARYVVGIQEGREES-IKLMNEVADK-- 149
Query: 179 SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
G S CPG++ Y EK + +LP + VKSP ++ G L+K EK+ Y
Sbjct: 150 --GERKICSACPGFLMYCEKKQQD-LLPLLIDVKSPMEITGHLLKDGNKEKM-------Y 199
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-----LATTTLQEEK 293
H+++MPC+DKKLE+ R E +G VDCVIT EL L+ E ATT +E
Sbjct: 200 HLSIMPCFDKKLESMRP----ESIGL--VDCVITPKELVNLITPEQVDKYFATT---KET 250
Query: 294 DGILDW---------PWDEHNPHRMLLVN-GTGSGGYAHNVLSHAIRQLCPGESP---VV 340
G+L+W W N N G+ SGG+A + H Q+ ++ +
Sbjct: 251 IGMLEWEDAIQRVTPKW--MNIDTSFKTNEGSSSGGFAWQYILHRRFQMSDNDNDNAYKI 308
Query: 341 EFKPLRNPDIREATFTC--GDVTLRFCIANGFRNIQNLI--------QKLKR--KRLPY- 387
E RN D+ E G + +R GFRNIQNL +KLKR ++ P
Sbjct: 309 ETVRGRNLDVTEFRLIDEEGKILVRSTQVFGFRNIQNLRRLVKDVKPRKLKRFIRKRPTA 368
Query: 388 --------------------------------DFIEIMACPSGCLNGGAQIRNEKVASPK 415
DF+E+MACP GC+ GG ++N P
Sbjct: 369 NGNDNSISLSSSINNQDNNNTKVEEPVDFCKSDFLEVMACPRGCIAGGGNLKNGIKNGPD 428
Query: 416 ETA---LELETILCD---LAKSEPRENATL 439
+ + +L T+ + EPR N TL
Sbjct: 429 QDSDPNQDLNTVYMTSIPMTSIEPRHNLTL 458
>gi|332654613|ref|ZP_08420356.1| [Fe] hydrogenase gamma [Ruminococcaceae bacterium D16]
gi|332516577|gb|EGJ46183.1| [Fe] hydrogenase gamma [Ruminococcaceae bacterium D16]
Length = 696
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 199/418 (47%), Gaps = 49/418 (11%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C IT++ +V + I + N K +V+S + +LG
Sbjct: 70 CIYCGQCANVCPVDSITERDECPQVQQAIADPN----------KVVVVSTSPAVRAALGE 119
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTS 187
+F + V K+ + LGVD VLD A ++VE +E + R PL FTS
Sbjct: 120 EFGMEPGAFVEGKMVALLRALGVDYVLDTNFAADLTIVEEASELIRRITEKDRPLPQFTS 179
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV + E E +LP++S KSP + G +KT+ A+++G+ P I HVTL PC
Sbjct: 180 CCPGWVHFTEIYAPE-LLPHLSTAKSPIGMQGPTVKTYFAKQMGLDPRQIVHVTLTPCTA 238
Query: 248 KKLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E R + Y+ G RD D VIT EL + K +DW
Sbjct: 239 KKFEVRREEMHAAGDYHGIQGMRDTDQVITTREL------------ARWAKAAGIDWTAL 286
Query: 303 EHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ----LCPGESP--VVEFKPLRNPD-IRE 352
E + + L+ +G+G G V+ A+R L +P +++ P+R D +RE
Sbjct: 287 EDSAYDSLMGKASGAGVIFGNTGGVMEAALRTAYAYLTGKSAPESLLQLDPVRGYDGVRE 346
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN---- 408
A T GD+TL+ + G N + ++++K Y F+E+MACP GC+ GG Q +N
Sbjct: 347 AQVTIGDLTLQVAVVYGTANARRFLERMKESGKQYHFVEVMACPGGCIGGGGQPKNLMKN 406
Query: 409 -EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
++ + AL L S EN ++ +Y+A+ G ++ + ML+T+Y++
Sbjct: 407 ADETRKSRIAALYQRDGSMTLRSS--HENPEIKAVYEAFYGQPLSELAEQMLHTTYYD 462
>gi|429728102|ref|ZP_19262844.1| putative ferredoxin hydrogenase HydA1 [Peptostreptococcus
anaerobius VPI 4330]
gi|429150528|gb|EKX93434.1| putative ferredoxin hydrogenase HydA1 [Peptostreptococcus
anaerobius VPI 4330]
Length = 589
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 198/411 (48%), Gaps = 38/411 (9%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I TDC C CIT H V + N+ K +IV + + P +
Sbjct: 183 IEQTDCSLCGQCIT-----------HCPVGALTVRNDIDKVYRAMEDPSIVTVVQVAPAV 231
Query: 127 SLGAKFALSHEQVVAK---LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
L+ ++ A + K++G D V D + +++E EFL++F +G
Sbjct: 232 RTAWAERLNIDEKDASTNLMVAALKKIGFDYVFDTNFSADLTIMEEATEFLNKFTAGPME 291
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + + + + + Y+S KSPQQ+ G++ KT+ A+ L ++P I+ V+
Sbjct: 292 FPMFTSCCPGWVRFIKSQYPDLV-KYLSTAKSPQQMFGTIAKTYYAKLLNINPKKIFCVS 350
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA N+ +DVD VIT LE ++ +E + EE+ D P
Sbjct: 351 IMPCTAKKHEADIPSI-NDSEAPKDVDVVITTRGLEKMIRSENIKFDMLEEE--AFDMP- 406
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLR-NPDIREA 353
L G+G+G G V+ A+R G+ P + FK +R RE+
Sbjct: 407 ---------LGIGSGAGAIFGATGGVMEAALRSAYYFVTGKDPEPDAFKSVRGQKGWRES 457
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS 413
TF T+R +A+G +N + LI+ L RK + YDF+EIMACP GC GG Q +
Sbjct: 458 TFDIEGNTVRVAVASGLKNARRLIEALLRKEVSYDFVEIMACPGGCSGGGGQPIKDGQEL 517
Query: 414 PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
++ A +L I +A EN ++ +Y +LG ++ +L+T +
Sbjct: 518 AEKRAKKLYDIDKKMALRYSHENPSIIKVYDDYLGVPNSKLAHKLLHTDHE 568
>gi|238916167|ref|YP_002929684.1| NADH dehydrogenase I chain G [Eubacterium eligens ATCC 27750]
gi|238871527|gb|ACR71237.1| NADH dehydrogenase I chain G [Eubacterium eligens ATCC 27750]
Length = 560
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 184/365 (50%), Gaps = 47/365 (12%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I+ T C C C+++ +T++ ++V V+ A NE+ T+V I P +
Sbjct: 183 IAETACTLCGQCVSNCPVGALTER--DDVGIVL------DAIENEDIITVV---QIAPAV 231
Query: 127 --SLGAKFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSG 180
+ G F +S E A +L +R+G D + D A +++E +EFL+R
Sbjct: 232 RAAWGEDFGMSKEYATAQRLVAGLRRIGFDYIFDTTFAADMTIMEEGSEFLERLPEIKES 291
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
G P+FTS CPGWV + + E + +S KSPQQ+ G++ K++ AEKLGV P I+ V
Sbjct: 292 GLPMFTSCCPGWVKFVKSEFPE-MAGRLSTAKSPQQMFGAITKSYYAEKLGVDPEKIFCV 350
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDW 299
++MPC KK E + G +DVD V+T E+E + A + L E++ D
Sbjct: 351 SIMPCLAKKDECTWD-------GGKDVDAVLTTREVERMFKAFFIKPEELDEDE---FDN 400
Query: 300 PWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IR 351
P E GTG+G G V+ A+R L G +P + F+ +R + +
Sbjct: 401 PLGE----------GTGAGVIFGATGGVMEAALRSAYYLVTGNNPDADAFQSVRGLEGWK 450
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
EA+F T+ +A+G N + L+ +K+ + YDF+EIM+CP GC+NGG Q E
Sbjct: 451 EASFDLNGTTVNVAVASGLGNTRRLVNAIKKGEVHYDFVEIMSCPGGCINGGGQPYKEDA 510
Query: 412 ASPKE 416
+E
Sbjct: 511 VMVEE 515
>gi|323141631|ref|ZP_08076513.1| putative ferredoxin hydrogenase HydA1 [Phascolarctobacterium
succinatutens YIT 12067]
gi|322413896|gb|EFY04733.1| putative ferredoxin hydrogenase HydA1 [Phascolarctobacterium
succinatutens YIT 12067]
Length = 575
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 189/375 (50%), Gaps = 39/375 (10%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFS 165
A+ N K +V+ A ++LG + + QVV K+ + LG D V D + +
Sbjct: 219 AAINNPEKVVVVQTAPSVRVALGEELGIPAGQVVTGKMVAALRHLGFDKVFDTNFSADLT 278
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E +EFL R +GG P+ TS PGWV E + E +LP++S KSPQQ+ G++ KT
Sbjct: 279 IMEEGHEFLQRLQNGGVLPMITSCSPGWVNMIELKYPE-LLPHLSTAKSPQQMFGAVAKT 337
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AE+ G+ P+ I V++MPC KK EA+R + GYRDVD VIT EL ++
Sbjct: 338 YFAERAGIDPAKIVSVSVMPCTAKKAEAAREEMCAS--GYRDVDVVITTRELGRMI---- 391
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCP----GES 337
++ +D+ E L GTG+ G V+ A+R + E
Sbjct: 392 --------REAGIDFNALEEAEFDSPLGTGTGAAVIFGTTGGVMEAALRTVAEVVAGKEL 443
Query: 338 PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
P +E+ +R + REA V+++ + + ++ + +++++K Y FIE+MACP
Sbjct: 444 PKLEYNEVRGMEQTREAVIDVAGVSVKVAVVHTLKSAKMMLERIKAGTADYQFIEVMACP 503
Query: 397 SGCLNGGAQ-------IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGG 449
GC+ GG Q IR ++ +E + +L KS EN ++ LY WLG
Sbjct: 504 GGCIGGGGQPVPVDASIRQKR----REAIFNCDRT-SELRKSH--ENPEIKTLYDTWLGK 556
Query: 450 KSTDKGKHMLNTSYH 464
+++ +L+T YH
Sbjct: 557 PLSERAHSLLHTHYH 571
>gi|225016115|ref|ZP_03705348.1| hypothetical protein CLOSTMETH_00059 [Clostridium methylpentosum
DSM 5476]
gi|224951112|gb|EEG32321.1| hypothetical protein CLOSTMETH_00059 [Clostridium methylpentosum
DSM 5476]
Length = 338
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 172/339 (50%), Gaps = 27/339 (7%)
Query: 138 QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYA 196
V K+ +RLG D V D +++E NEF++R +GG P+ TS PGW+ Y
Sbjct: 6 NVKGKMVAALRRLGFDKVFDTDFGADLTIMEEANEFIERVQNGGKLPMITSCSPGWINYC 65
Query: 197 EKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD 256
E + +L +S KSPQQ+ G++IKT AE+ G+ P I V++MPC KK E RAD
Sbjct: 66 EHYFPD-MLDNLSTCKSPQQMTGAMIKTWYAEQNGLDPKDIVVVSIMPCTAKKYEIHRAD 124
Query: 257 FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
+ GY D+D V+T EL ++ T D P +E +P + + G G
Sbjct: 125 --QDAAGYPDIDIVLTTRELARMINRAHINFT---------DLPDEEFDP-ALGITTGAG 172
Query: 317 -----SGGYAHNVLSHAIRQLCPGESPVVE-FKPLRNPD-IREATFTCGDVTLRFCIANG 369
+GG L A + + V++ + +R D I+ AT+ D+T++ +A+G
Sbjct: 173 AIFGATGGVMEAALRTAADWITGKDLSVIDYYTDVRGTDGIKTATYDIKDLTIKVGVASG 232
Query: 370 FRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKETALELETILCDL 428
N + L+ ++ R+ +DFIEIM CP GC+NGG Q ++ + + + + L D
Sbjct: 233 LANAKELLNRV-REGEHFDFIEIMCCPGGCVNGGGQPLQPSSIYNFTDLKTKRAKALYDE 291
Query: 429 AKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
K P ++ +E LYK +L + K +L+TSY
Sbjct: 292 DKELPIRKSHKSPIIEKLYKEYLEKPGSHKAHELLHTSY 330
>gi|403252994|ref|ZP_10919299.1| NADP-reducing hydrogenase, subunit D [Thermotoga sp. EMP]
gi|402811756|gb|EJX26240.1| NADP-reducing hydrogenase, subunit D [Thermotoga sp. EMP]
Length = 582
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 201/409 (49%), Gaps = 38/409 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+ C C + I + S +KV+ E K K +V+ A +++G
Sbjct: 189 TDCIGCGQCAAFCPTGAIVENS---AVKVVLEELEKKE------KILVVQTAPSVRVAIG 239
Query: 130 AKFA-----LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
+F +S Q+VA L +RLG D V D +++E +EFL+R G
Sbjct: 240 EEFGYAPGTISTGQMVAAL----RRLGFDYVFDTNFGADLTIMEEGSEFLERLEKGDLED 295
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV EK + E + +S KSPQ ++ +++KT+ AEKLGV P I+HV+
Sbjct: 296 LPMFTSCCPGWVNLVEKVYPE-LRTRLSSAKSPQGMLSAMVKTYFAEKLGVKPEDIFHVS 354
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA R G VD V+T EL L+ + +K + P
Sbjct: 355 IMPCTAKKDEALRKQLMVN--GVPAVDVVLTTRELGKLI---------RMKKIPFANLPE 403
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIR---QLCPGES-PVVEFKPLRN-PDIREATFT 356
+E++ + G V+ A+R +L G++ P + F+ +R +REA
Sbjct: 404 EEYDAPLGISTGAAALFGVTGGVMEAALRTAYELKTGKTLPKIVFEEVRGLKGVREAEID 463
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
+R + +G N++NL++K+ R+ + Y F+E+MACP GC+ GG Q + ++
Sbjct: 464 LDGKKIRIAVVHGTANVRNLVEKILRREVKYHFVEVMACPGGCIGGGGQPYSRDPEILRK 523
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
A + TI + + EN ++ LY+ +L + K +L+T Y +
Sbjct: 524 RAEAIYTIDERMTLRKSHENPAIKKLYEEYLEHPLSHKAHELLHTYYED 572
>gi|167745461|ref|ZP_02417588.1| hypothetical protein ANACAC_00152 [Anaerostipes caccae DSM 14662]
gi|167655182|gb|EDR99311.1| hydrogenase, Fe-only [Anaerostipes caccae DSM 14662]
Length = 572
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 201/413 (48%), Gaps = 37/413 (8%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I + DC C CIT + ++ ++ A +EN K +V +A
Sbjct: 182 DIRVADCSLCGQCITHCPVGALRERDDTSML--------FSALEDEN-KIVVAQIAPAVR 232
Query: 126 LSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG--- 181
+ + LS E+ V K+ F+R+G+D V D + +++E +EF+ R G
Sbjct: 233 AAWAEQLGLSREEAPVEKIVTAFRRMGIDYVFDTTFSADLTIMEEGSEFVKRLQDGDLEE 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + + + I +S KSPQQ+ G+++KT+ A+KLGV P I+ ++
Sbjct: 293 YPMFTSCCPGWVRFIKTQFPDMI-GRLSTAKSPQQMFGAVMKTYFAKKLGVDPERIFTLS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK E FY E G+ D+DCV+T EL+ +L E E+ G D P+
Sbjct: 352 IMPCLAKKAEREMDLFYEEYAGH-DIDCVLTTRELDRMLRAEHLNPQFLEK--GEFDSPF 408
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESP----VVEFKPLRNPDIR 351
+ GTG+G G V+ A+R L GE+P E + ++
Sbjct: 409 E----------TGTGAGVIFGATGGVMEAALRSAYFLVTGENPDADAFREIRGVKRQGWT 458
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
EA F +R + +G N +NL++ ++RK + Y+F+E+MACP GC GG Q ++
Sbjct: 459 EAEFDVAGNVIRVAVVSGLGNTRNLMEAIRRKEVKYEFVEVMACPGGCAGGGGQPIHDGQ 518
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
+E L + D +N +++LY+ + + + +L+T +
Sbjct: 519 ELAEERGSSLYFLDRDTEIRFSHDNPDIQNLYEEFFEKPLSHRAHQLLHTEHQ 571
>gi|300853895|ref|YP_003778879.1| Fe-Fe hydrogenase 2 [Clostridium ljungdahlii DSM 13528]
gi|300434010|gb|ADK13777.1| Fe-Fe hydrogenase 2 [Clostridium ljungdahlii DSM 13528]
Length = 462
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 168/330 (50%), Gaps = 16/330 (4%)
Query: 141 AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKS 199
K+ ++LG D V D +++E +E L R GG P+FTS CP WV YAE++
Sbjct: 135 GKMAAALRKLGFDKVYDTNFGADLTIMEEGSELLKRVAEGGVLPMFTSCCPAWVKYAEQT 194
Query: 200 HGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN 259
+ E +LP++S KSP Q+ G++ KT+ AE V+P+ IY+V++MPC K+ E+ R + ++
Sbjct: 195 YPE-LLPHLSSCKSPNQMAGAIFKTYGAEINKVNPAKIYNVSVMPCTCKEFESEREEMHD 253
Query: 260 EELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG 318
G+RDVD VIT EL L + ++ T++EE+ D P + + +G
Sbjct: 254 S--GHRDVDAVITTRELAQLFKDADIDFNTIEEEQ---FDTPLGMYTGAGTIF---GATG 305
Query: 319 GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLI 377
G L P ++ +R + R A GD+ L+ + +G +N+++++
Sbjct: 306 GVMEAALRTGYELYTKKTIPSIDLTMVRGGEGFRTAEVDLGDIRLKVGVVSGLKNVKDVM 365
Query: 378 QKLKRKRLPYDFIEIMACPSGCLNGGAQ----IRNEKVASPKETALELETILCDLAKSEP 433
+ +K + FIE+M CP GC++GG Q + ++K + L +L +
Sbjct: 366 ESVKAGKCDLHFIEVMTCPQGCISGGGQPKVILDSDKEEAYNNRKKGLYNHDANLTYRKS 425
Query: 434 RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
EN ++ +Y +L K +L+T Y
Sbjct: 426 HENPEIKKIYDEFLDKPLGAKSHELLHTKY 455
>gi|15642974|ref|NP_228016.1| NADP-reducing hydrogenase, subunit D [Thermotoga maritima MSB8]
gi|4980698|gb|AAD35293.1|AE001705_4 NADP-reducing hydrogenase, subunit D, putative [Thermotoga maritima
MSB8]
Length = 608
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 201/409 (49%), Gaps = 38/409 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+ C C + I + S +KV+ E K K +V+ A +++G
Sbjct: 215 TDCIGCGQCAAFCPTGAIVENS---AVKVVLEELEKK------EKILVVQTAPSVRVAIG 265
Query: 130 AKFA-----LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
+F +S Q+VA L +RLG D V D +++E +EFL+R G
Sbjct: 266 EEFGYAPGTISTGQMVAAL----RRLGFDYVFDTNFGADLTIMEEGSEFLERLEKGDLED 321
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV EK + E + +S KSPQ ++ +++KT+ AEKLGV P I+HV+
Sbjct: 322 LPMFTSCCPGWVNLVEKVYPE-LRTRLSSAKSPQGMLSAMVKTYFAEKLGVKPEDIFHVS 380
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA R G VD V+T EL L+ + +K + P
Sbjct: 381 IMPCTAKKDEALRKQLMVN--GVPAVDVVLTTRELGKLI---------RMKKIPFANLPE 429
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIR---QLCPGES-PVVEFKPLRN-PDIREATFT 356
+E++ + G V+ A+R +L G++ P + F+ +R +REA
Sbjct: 430 EEYDAPLGISTGAAALFGVTGGVMEAALRTAYELKTGKALPKIVFEEVRGLKGVREAEID 489
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
+R + +G N++NL++K+ R+ + Y F+E+MACP GC+ GG Q + ++
Sbjct: 490 LDGKKIRIAVVHGTANVRNLVEKILRREVKYHFVEVMACPGGCIGGGGQPYSRDPEILRK 549
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
A + TI + + EN ++ LY+ +L + K +L+T Y +
Sbjct: 550 RAEAIYTIDERMTLRKSHENPAIKKLYEEYLEHPLSHKAHELLHTYYED 598
>gi|338811687|ref|ZP_08623892.1| Fe-Fe hydrogenase 2 [Acetonema longum DSM 6540]
gi|337276224|gb|EGO64656.1| Fe-Fe hydrogenase 2 [Acetonema longum DSM 6540]
Length = 461
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 169/336 (50%), Gaps = 28/336 (8%)
Query: 141 AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKS 199
K+ K G D + D A +++E +E + R GG P+FTS CP WV Y E +
Sbjct: 134 GKMAAALKTAGFDRIYDTNFAADLTIMEESSELVQRLTQGGRMPMFTSCCPAWVKYVEDT 193
Query: 200 HGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN 259
+ E I P++S KSPQQ+ G+L KT A+ V P+ +Y +++MPC KK E R +
Sbjct: 194 YPELI-PHLSSCKSPQQMAGALFKTFGAKLDEVEPARVYSLSVMPCTCKKFECERPEMAA 252
Query: 260 EELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG- 318
GY DVD V+T EL LL KD +D+ L TG+G
Sbjct: 253 S--GYHDVDAVLTTRELAQLL------------KDAGIDFDKLTEAEFDKPLGTYTGAGA 298
Query: 319 --GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFR 371
G V+ A+R + G+S P ++F +R + +R+A GD+ L+ + G +
Sbjct: 299 IFGVTGGVMEAALRTAYEWVTGQSLPELDFTTVRGGEGVRKAAVKLGDLELKVVVVAGLK 358
Query: 372 NIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ----IRNEKVASPKETALELETILCD 427
+++ L++++K + + FIE+M CP GC++GG Q I +K A+ +
Sbjct: 359 HVRELLEQVKAGKADFHFIEVMTCPVGCVSGGGQPKVLIPGDKPAAYAGRKGSIYNHDAA 418
Query: 428 LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L+ + +N ++ LY+A+LG + H+L+T Y
Sbjct: 419 LSLRKSHDNPEIQKLYEAFLGKPLGSESHHLLHTHY 454
>gi|257066577|ref|YP_003152833.1| hydrogenase, Fe-only [Anaerococcus prevotii DSM 20548]
gi|256798457|gb|ACV29112.1| hydrogenase, Fe-only [Anaerococcus prevotii DSM 20548]
Length = 577
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 200/406 (49%), Gaps = 28/406 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C C C++ + +T++S+ EV + + + K +++ +A ++L
Sbjct: 192 TTCTFCGQCLSVCPTGALTEKSNIPEVWRALSSD-----------KHVIVQVAPAVRVAL 240
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLF 185
G F + V K+ +RLG D V D A +++E NEF+DR L G G P+
Sbjct: 241 GEMFGIRVGTNVEGKIVTALRRLGFDRVFDTNFAADLTIMEEANEFVDR-LKGKGELPIL 299
Query: 186 TSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS CPGWV + E+ + I +P S KSP ++ G++ K++ AEK G++P I V++MP
Sbjct: 300 TSCCPGWVNFMEQQFSDMIDIP--STCKSPHEMFGAIAKSYYAEKEGINPEDIVVVSVMP 357
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK EA R + NE GY DVD VIT EL ++ E+ D D P E
Sbjct: 358 CISKKYEAKRDELENE--GYSDVDTVITTRELAEMIKEVGIDFASLEDSD--FDNPMGES 413
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLR 363
+ GT SGG + A + + VEF LR I+ AT ++
Sbjct: 414 TGAGDIF--GT-SGGVIEATVRTAYNIITEKDLEKVEFYDLRGLRGIKYATVDIEGREIK 470
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKETALELE 422
+ANG N + L++KLK K + D IE+MACP GC+ GG Q + ++ K+ + L
Sbjct: 471 IAVANGLGNTRRLLEKLKNKEISLDAIEVMACPGGCIGGGGQPYHHGDISILKKRSEGLY 530
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
+ + EN ++ LY +L ++K ++L+TSY PK
Sbjct: 531 KLDESKKLRKSYENPYIKDLYDEYLKEPGSEKAHNLLHTSYKASPK 576
>gi|255526809|ref|ZP_05393708.1| hydrogenase, Fe-only [Clostridium carboxidivorans P7]
gi|296186425|ref|ZP_06854828.1| putative ferredoxin hydrogenase [Clostridium carboxidivorans P7]
gi|255509488|gb|EET85829.1| hydrogenase, Fe-only [Clostridium carboxidivorans P7]
gi|296048872|gb|EFG88303.1| putative ferredoxin hydrogenase [Clostridium carboxidivorans P7]
Length = 574
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 198/411 (48%), Gaps = 47/411 (11%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENT--KTIVLSLAIQPVLS 127
T+C C C+ + + + NN K NT K +++ A +
Sbjct: 193 TNCTFCGQCVAVCPTGALAEV-----------NNTTKVWDALNTEGKLVIVQTAPAVRAA 241
Query: 128 LGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLF 185
LG +F L + + V K+ + LG D V D A +++E E + R +GG P+
Sbjct: 242 LGEEFGLEYGKPVTGKMVAALRSLGFDKVFDTDFAADLTIMEEATELMGRITNGGKLPML 301
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CPGW+ + E + +L S KSPQQ+ G++ KT+ AEK+ + P I V++MPC
Sbjct: 302 TSCCPGWINFIEHEFSD-LLDSPSSCKSPQQMFGAVAKTYFAEKMNMDPKDIILVSVMPC 360
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA+R + + DVD VI+ EL ++ K+ +++ +
Sbjct: 361 LAKKYEAARPEMNS------DVDIVISTRELAKMI------------KEAGINFEKLQDE 402
Query: 306 PHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTC 357
LL TG+ G V+ A+R + GE+ V+F+ +R D I+EA+
Sbjct: 403 DFDSLLGESTGAAVIFGVTGGVMEAALRTAYEWITGETLDNVDFEVVRGLDGIKEASIKI 462
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNE-KVASP 414
D+ ++ I +G N + L+ K++ + Y IEIMACP GC++GG Q I + ++
Sbjct: 463 KDLEVKAAIVSGLGNARKLLNKIREGKADYQIIEIMACPGGCIDGGGQPYIHGKYEILKD 522
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ AL E L KS EN + LY+ +LG +++K +L+T Y N
Sbjct: 523 RMNALYEEDKNKTLRKS--HENPAIIKLYEEFLGKPNSEKAHKLLHTKYTN 571
>gi|418046137|ref|ZP_12684231.1| hydrogenase, Fe-only [Thermotoga maritima MSB8]
gi|351675690|gb|EHA58850.1| hydrogenase, Fe-only [Thermotoga maritima MSB8]
Length = 582
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 201/409 (49%), Gaps = 38/409 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+ C C + I + S +KV+ E K K +V+ A +++G
Sbjct: 189 TDCIGCGQCAAFCPTGAIVENS---AVKVVLEELEKK------EKILVVQTAPSVRVAIG 239
Query: 130 AKFA-----LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
+F +S Q+VA L +RLG D V D +++E +EFL+R G
Sbjct: 240 EEFGYAPGTISTGQMVAAL----RRLGFDYVFDTNFGADLTIMEEGSEFLERLEKGDLED 295
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV EK + E + +S KSPQ ++ +++KT+ AEKLGV P I+HV+
Sbjct: 296 LPMFTSCCPGWVNLVEKVYPE-LRTRLSSAKSPQGMLSAMVKTYFAEKLGVKPEDIFHVS 354
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA R G VD V+T EL L+ + +K + P
Sbjct: 355 IMPCTAKKDEALRKQLMVN--GVPAVDVVLTTRELGKLI---------RMKKIPFANLPE 403
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIR---QLCPGES-PVVEFKPLRN-PDIREATFT 356
+E++ + G V+ A+R +L G++ P + F+ +R +REA
Sbjct: 404 EEYDAPLGISTGAAALFGVTGGVMEAALRTAYELKTGKALPKIVFEEVRGLKGVREAEID 463
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
+R + +G N++NL++K+ R+ + Y F+E+MACP GC+ GG Q + ++
Sbjct: 464 LDGKKIRIAVVHGTANVRNLVEKILRREVKYHFVEVMACPGGCIGGGGQPYSRDPEILRK 523
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
A + TI + + EN ++ LY+ +L + K +L+T Y +
Sbjct: 524 RAEAIYTIDERMTLRKSHENPAIKKLYEEYLEHPLSHKAHELLHTYYED 572
>gi|358068217|ref|ZP_09154687.1| hypothetical protein HMPREF9333_01568 [Johnsonella ignava ATCC
51276]
gi|356693761|gb|EHI55432.1| hypothetical protein HMPREF9333_01568 [Johnsonella ignava ATCC
51276]
Length = 578
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 186/402 (46%), Gaps = 28/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T C C CI + +T+ +N A + + KT+++ A ++LG
Sbjct: 192 TTCTFCGQCIAVCPTGALTEV----------DNTADVWDAISSDKTVIVQTAPAVRVALG 241
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F + VV K+ K +G D V D A ++VE +EF DRF +GG P+ TS
Sbjct: 242 EEFGMEPGTVVTGKMVTALKNMGFDYVYDTNFAADVTIVEEASEFADRFKNGGRLPILTS 301
Query: 188 ECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
CP W+ + E + E I +P S KSP ++ GSL K++LAEKLG P I V++MPC
Sbjct: 302 CCPSWIKFVEHNFKELIDIP--SSCKSPHEMFGSLAKSYLAEKLGKKPEDIVVVSVMPCV 359
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA R + N G DVD VI+ EL ++ + +T D D +
Sbjct: 360 AKKYEAQRPELGNS--GNSDVDIVISTRELARMIVD--STQDFVNLPDSSFDRFMGQSTG 415
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
+ +GG A L A L E V F LR + I+E T G +
Sbjct: 416 AGTIF---GSTGGVAEATLRTAYEFLTGEELKEVNFTALRGFEKIKETTVNIGGTQINVA 472
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETALELE 422
+A+G N + L+ ++ Y IEIMACP GC++GG Q N ++ + + + +
Sbjct: 473 VASGLGNARKLLNDVRDGIKQYHIIEIMACPGGCIDGGGQPYMHGNTEILTKRMNS--IY 530
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
I + +N + LY +LG +K +L+T ++
Sbjct: 531 NIDNKKHIRQSHKNPEVLQLYNEYLGEFYGEKAHKLLHTHFY 572
>gi|150021476|ref|YP_001306830.1| hydrogenase, Fe-only [Thermosipho melanesiensis BI429]
gi|149793997|gb|ABR31445.1| hydrogenase, Fe-only [Thermosipho melanesiensis BI429]
Length = 582
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 197/406 (48%), Gaps = 29/406 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+C++C C I + ++V+K++ K +V A ++L
Sbjct: 186 TECISCGQCAYLCPVGAIYETPDWKKVLKLLERKE----------KILVAQTAPSVRVAL 235
Query: 129 GAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F + V K+ K+LG D V D A ++VE E ++RF GG P+FT
Sbjct: 236 GEEFGMEPGSVSTGKMVASLKKLGFDYVFDTNFAADLTIVEEGTELVERFKEGGPFPMFT 295
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGW+ EK + EFI P +S KSPQQ+M S++KT+ A+K+GV P I V++MPC
Sbjct: 296 SCCPGWINLLEKIYPEFI-PNVSSAKSPQQMMSSVVKTYFAKKIGVDPEDIIMVSVMPCT 354
Query: 247 DKKLEASRADFYNEELGYRDV---DCVITAVELEVLLA-NELATTTLQEEKDGILDWPWD 302
KK E R + R++ D VIT EL L+ E+ LQ D D P
Sbjct: 355 AKKDEIKRPQQKIKLEDGREIQTTDYVITTRELAKLIKLKEINFAGLQ---DAEFDNPLG 411
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVT 361
+ +GG L A + E P +EF +R D IREA
Sbjct: 412 TSTGAAAIF---GVTGGVMEAALRTAYEVITNKELPKLEFTAVRGLDGIREAEIDIEGKK 468
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
++ IA+G N++ L+ ++ + YDFIEIMACP GC+ GG Q ++ K+ A+ +
Sbjct: 469 VKVAIAHGTANVRKLLDDIRDGKRYYDFIEIMACPGGCIGGGGQPKSLDPDILKKRAMAI 528
Query: 422 ETI--LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+I L L KS EN ++ LY+ +L ++ +L+T Y +
Sbjct: 529 YSIDELSTLRKS--HENPDIQKLYEEFLEKPNSHIAHELLHTYYTD 572
>gi|359744034|gb|AEV57473.1| [FeFe]-hydrogenase [Clostridium butyricum]
Length = 574
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 194/423 (45%), Gaps = 38/423 (8%)
Query: 57 GREEKLKKVE---ISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNEN 112
G + K++ +E T+CL C C+ + + ++ H + V + + + N H
Sbjct: 172 GPDRKVQAIEGKCFDETNCLLCGQCVAACPVAALNEKPHIDRVKEALEDPNKH------- 224
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
+++++A S+G F + + V KL ++LG D V D+ +++E
Sbjct: 225 ---VIVAMAPAVRTSMGELFKMGYGVDVTGKLYSSLRQLGFDKVFDINFGADMTIMEEAT 281
Query: 172 EFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
EF++R + G P+FTS CP WV AE + E +L +S KSPQQ+ G+ KT+
Sbjct: 282 EFIERINNNGPFPMFTSCCPAWVRQAENYYPE-LLGNLSSAKSPQQIFGAASKTYYPTVE 340
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTL 289
G+ P +Y VT+MPC KK EA R + NE G R++D V+T EL ++ + ++ L
Sbjct: 341 GLDPKSVYTVTIMPCTAKKYEADRTEMENE--GLRNIDAVLTTRELAKMIKDAKINFAAL 398
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
++EK D E+ ++ SGG + + +E+ +R D
Sbjct: 399 EDEKS---DPSMGEYTGAGVIF---GASGGVMEAAFRSVKDFVEDKDLSDIEYTQVRGLD 452
Query: 350 -IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
I+EAT G + NG N+ ++ + Y F+E+M+CP GC+NGG Q
Sbjct: 453 GIKEATVEIGGKNFNVAVINGSDNLTKFVEGGQMDEKQYHFVEVMSCPGGCVNGGGQ--- 509
Query: 409 EKVASPKETALELETILCDL--------AKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
VA+ + + + K + +N L +Y ++G K +L+
Sbjct: 510 PHVAAKDRDTANVRAVRASVLYNQDKTAVKRKFHKNQALIKMYHEYMGMPGQHKAHELLH 569
Query: 461 TSY 463
Y
Sbjct: 570 LKY 572
>gi|404372751|ref|ZP_10978035.1| iron hydrogenase 1 [Clostridium sp. 7_2_43FAA]
gi|226914125|gb|EEH99326.1| iron hydrogenase 1 [Clostridium sp. 7_2_43FAA]
Length = 575
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 188/417 (45%), Gaps = 54/417 (12%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C C+ + ++++SH + +K + + K +++++A ++G
Sbjct: 188 TNCLLCGQCVAACPVDALSEKSHMDRVK---------DALADQEKHVIVAMAPSVRTAMG 238
Query: 130 AKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + + V K+ + LG D + D+ +++E E + R +GG P+FTS
Sbjct: 239 ELFKMGYGVDVTGKVYTALRELGFDKIFDINFGADMTIMEEATELIQRIKTGGPFPMFTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV E + FI ++S KSPQQ+ G+ KT+ + V P +++ VT+MPC
Sbjct: 299 CCPAWVRQVENYYPNFI-EHLSSAKSPQQIFGTASKTYYPQVADVDPKNVFTVTIMPCTA 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + N G R++D VIT EL ++ KD +D+ E +
Sbjct: 358 KKYEADRPEMENN--GIRNIDAVITTRELAKMI------------KDAKIDFAKLEDSEA 403
Query: 308 RMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IREATF 355
+ TG+G G V+ A+R VE K L N + I+EAT
Sbjct: 404 DPAMGEYTGAGAIFGATGGVMEAALRTA----KDFVEGKDLENIEYEQVRGLAGIKEATV 459
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G + NG ++ ++ K Y FIE+MACP GC+NGG Q V +
Sbjct: 460 EIGGDNYNVAVINGASSLFEFMKSGKVNEKKYHFIEVMACPGGCVNGGGQ---PHVNASD 516
Query: 416 ETALELETILCD---------LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+++ ++ L K + EN L +Y+ ++G K +L+ Y
Sbjct: 517 RLTMDIRSVRASVLYNQDKNVLKKRKSHENGALNKMYETFMGEPGHGKAHELLHIKY 573
>gi|170288544|ref|YP_001738782.1| hydrogenase, Fe-only [Thermotoga sp. RQ2]
gi|170176047|gb|ACB09099.1| hydrogenase, Fe-only [Thermotoga sp. RQ2]
Length = 582
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 201/409 (49%), Gaps = 38/409 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+ C C + I + S +KV+ E K K +V+ A +++G
Sbjct: 189 TDCIGCGQCAAFCPTGAIVENS---AVKVVLEELEKK------EKILVVQTAPSVRVAIG 239
Query: 130 AKFA-----LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
+F +S Q+VA L +RLG D V D +++E +EFL+R G
Sbjct: 240 EEFGYAPGTISTGQMVAAL----RRLGFDYVFDTNFGADLTIMEEGSEFLERLEKGDLED 295
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV EK + E + +S KSPQ ++ +L+KT+ AEKLGV P I+HV+
Sbjct: 296 LPMFTSCCPGWVNLVEKVYPE-LRTRLSSAKSPQGMLSALVKTYFAEKLGVKPEDIFHVS 354
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA R G VD V+T EL L+ + +K + P
Sbjct: 355 IMPCTAKKDEALRKQLMVN--GVPAVDVVLTTRELGKLI---------RMKKIPFANLPE 403
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIR---QLCPGES-PVVEFKPLRN-PDIREATFT 356
+E++ + G V+ A+R +L G++ P + F+ +R ++EA
Sbjct: 404 EEYDAPLGISTGAAALFGVTGGVMEAALRTAYELKTGKTLPKIVFEDVRGLKGVKEAEID 463
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
+R + +G N++NL++K+ R+ + Y F+E+MACP GC+ GG Q + ++
Sbjct: 464 LDGKKIRIAVVHGTANVRNLVEKILRREVKYHFVEVMACPGGCIGGGGQPYSRDPEILRK 523
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
A + TI + + EN ++ LY+ +L + K +L+T Y +
Sbjct: 524 RAEAIYTIDERMTLRKSHENPAIKKLYEEYLEHPLSHKAHELLHTYYED 572
>gi|302876890|ref|YP_003845523.1| hydrogenase, Fe-only [Clostridium cellulovorans 743B]
gi|307687576|ref|ZP_07630022.1| hydrogenase, Fe-only [Clostridium cellulovorans 743B]
gi|302579747|gb|ADL53759.1| hydrogenase, Fe-only [Clostridium cellulovorans 743B]
Length = 574
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 203/436 (46%), Gaps = 33/436 (7%)
Query: 38 RTG-AKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVM 96
+TG A I+I DG ++ + ++ T+CL C C+ ++++ H + +
Sbjct: 160 KTGTASIKIVRDGDLVRVSTTDDKCFDD-----TNCLLCGQCVAVCPVAALSEKPHIDRV 214
Query: 97 KVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHE-QVVAKLCGFFKRLGVDLV 155
K E+ K +++++A +LG F + + V K+ K LG + +
Sbjct: 215 KEALEDPE---------KHVIVAMAPSVRTALGELFKMGYGVDVTGKIYTALKELGFNRI 265
Query: 156 LDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSP 214
D+ +++E E + R + G P+FTS CPGWV AE + E +L +S KSP
Sbjct: 266 FDINFGADMTIMEEATELIQRINNNGPFPMFTSCCPGWVRQAENYYPE-LLSNLSSAKSP 324
Query: 215 QQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAV 274
QQ+ G+ K++ + PS I+ VT+MPC KK EA R + N+ G R++D VIT
Sbjct: 325 QQIFGAATKSYYPSISDIDPSKIFTVTIMPCTAKKYEADRPEMEND--GLRNIDAVITTR 382
Query: 275 ELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCP 334
EL ++ + A +DG D E+ + +GG L A +
Sbjct: 383 ELAKMVKD--AKINFATLEDGECDLAMGEYTGAGTIF---GATGGVMEAALRTAKDFVEK 437
Query: 335 GESPVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIM 393
+ +E++ +R + I+EAT G + NG N+ I+ R Y FIE+M
Sbjct: 438 ADLHDIEYEAVRGLNGIKEATVEIGGSEYNVAVINGSVNVFEFIKSGALDRKQYHFIEVM 497
Query: 394 ACPSGCLNGGAQIRNEKVASPKETALEL--ETILCDLAKSEPR----ENATLEHLYKAWL 447
ACP GC+NGG Q + VA + + L ++L + K+ P+ EN L+ +Y ++
Sbjct: 498 ACPGGCVNGGGQ-PHVPVADRMDMDIRLVRASVLYNQDKNLPKRKSHENEALKRMYDSYY 556
Query: 448 GGKSTDKGKHMLNTSY 463
G +L+ Y
Sbjct: 557 GTPGEGLAHKLLHVKY 572
>gi|406876161|gb|EKD25809.1| hypothetical protein ACD_79C01496G0001 [uncultured bacterium]
Length = 573
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 196/410 (47%), Gaps = 23/410 (5%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
++++ C+ C CI + + +QS + VI + N+ K + + A +
Sbjct: 184 MNVSSCIYCGQCIKVCPTGALREQS--SIKDVIN-------ALNDPEKIVTVQHAPAVSV 234
Query: 127 SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
+LG +F + L +RL D V D + +++E +E + R + G P+
Sbjct: 235 TLGEEFNMDPGADTAGVLVTALRRLKFDWVFDTSFSADLTIMEEASELVHRIKNNGKLPM 294
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS PGW+ + E+ + EF + +S KSPQQ+MG+++K++ A K + P I++V++MP
Sbjct: 295 LTSCSPGWIKFVEQFYPEF-MDNLSTCKSPQQMMGAVVKSYFAGKNKIDPKKIFNVSIMP 353
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK E+ R + N G +DVD V+T EL ++ + L + I D P+ E
Sbjct: 354 CTAKKFESDRPEMGNN--GIQDVDAVLTTRELVRMI--RMRGIDLNKLNPDIADNPFGER 409
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLR 363
+ L GSGG L A L ++ +PLR D ++ T + +
Sbjct: 410 SSAGKLF---GGSGGVMEAALRTAYNMLTGRNLDNLKIEPLRGLDSFKQTTVNINGLDVG 466
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELET 423
+ +G +N + L+ ++K R FIE+M CP GC+ GG Q +V + K+ L T
Sbjct: 467 VAVVSGLKNARKLLDEIKAGRNDLHFIEVMTCPGGCVAGGGQPGGIEVDAIKKRLKGLYT 526
Query: 424 ILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIAL 473
I EN +++ LYK +L + K +L+T Y+ K N+ L
Sbjct: 527 IDSGDKIRCSHENPSIQMLYKEFLHEPLSHKSHELLHTHYN---KRNVIL 573
>gi|310778437|ref|YP_003966770.1| hydrogenase, Fe-only [Ilyobacter polytropus DSM 2926]
gi|309747760|gb|ADO82422.1| hydrogenase, Fe-only [Ilyobacter polytropus DSM 2926]
Length = 572
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 205/432 (47%), Gaps = 30/432 (6%)
Query: 45 IQDDGAYIQETNGREEKLKKV---EISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIR 100
IQ G Y E E+++ V +S T C++C C+ L+ + E+ + ++
Sbjct: 158 IQGIGVYDVEVVDGEKEIVLVGGKNLSETKCISCGQCVKVCPVGALVENNTVSELSRELK 217
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVG 159
+ H ++ +A ++G +F ++ Q V + + G K+LG V
Sbjct: 218 KREKH----------FIVQMAPAIKHTIGEEFFIAPGQDVTSMMVGALKKLGFSKVFSTD 267
Query: 160 IAHCFSLVELENEFLDRFLSGGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQV 217
+ +++E E + R G G P+FTS CPGWV Y EK+H EF L +S KSPQQ+
Sbjct: 268 YSADVTIMEEGTELIQRLTKGKGKTPMFTSCCPGWVNYVEKNHPEF-LGNLSSCKSPQQI 326
Query: 218 MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELE 277
G+L K++ AE+ V I V++MPC KK EA R + + + RDVD VIT E
Sbjct: 327 FGALAKSYYAEESKVPKEDIVVVSIMPCTAKKGEAQRIEMEDHDR-VRDVDVVITTREFA 385
Query: 278 VLLA-NELATTTL--QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCP 334
L+ N + L +E D + + R+ GT SGG L L
Sbjct: 386 KLVKMNNINFAALPNGQEYDSFM---GKGSSAGRLF---GT-SGGVMEAALRTVATILSE 438
Query: 335 GESPVVEFKPLRN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIM 393
+ V+EF+ +R +++E T G+ L+ + NG + ++++ +K RL YDF+E+M
Sbjct: 439 EKVGVLEFEEIRGFKNVKETTVEIGENKLKLAVVNGIGSAHSVMEGIKSGRLYYDFVEVM 498
Query: 394 ACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTD 453
AC GC++GG + + ++ + +N ++ LY+ +L
Sbjct: 499 ACHGGCISGGGAPIPDNLDVRRQRMEGMHGFDKTSTLRRSHDNPEIKRLYENYLEDPCGH 558
Query: 454 KGKHMLNTSYHN 465
K H+L+T+Y +
Sbjct: 559 KSHHLLHTTYSD 570
>gi|154496519|ref|ZP_02035215.1| hypothetical protein BACCAP_00811 [Bacteroides capillosus ATCC
29799]
gi|150274152|gb|EDN01243.1| hydrogenase, Fe-only [Pseudoflavonifractor capillosus ATCC 29799]
Length = 449
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 194/426 (45%), Gaps = 65/426 (15%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + IT++ +V + + + N K +V+S + SLG
Sbjct: 48 CIYCGQCANACPVDSITERDECPQVRQAVADPN----------KVVVVSTSPAVRASLGE 97
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTS 187
+F ++ V K+ + LG D VLD A ++VE +E L R G PL FTS
Sbjct: 98 EFGMAPGAFVEGKMVALLRALGADYVLDTNFAADLTIVEEASELLRRLTQGDQPLPQFTS 157
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV +AE E +LP++S KSP + G +KT+ A+K+G+ P I HV L PC
Sbjct: 158 CCPGWVHFAEIYAPE-LLPHLSTAKSPIGMQGPTVKTYFAQKMGLDPRQIVHVALTPCTA 216
Query: 248 KKLEASR------ADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R AD++ E G RD D +IT EL E +DW
Sbjct: 217 KKFEIRREEMHAAADYHGVE-GMRDTDQIITTRELARWAKAEG------------VDWTA 263
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQLC------PGESPVVEFKPLRNPD-IR 351
E +P+ L+ +G+G G V+ A+R P + +++ P+R + +R
Sbjct: 264 LEDSPYDSLMGKASGAGVIFGNTGGVMEAALRTAYAYLTGQPAPASLLQLSPVRGYEGVR 323
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMAC----------PSGCLN 401
EA G +L + G N + ++++K Y F+E+MAC P +
Sbjct: 324 EAQVDLGGQSLNVAVIYGTANARGFLERMKADGKQYHFVEVMACPGGCIGGGGQPKDIMK 383
Query: 402 GGAQIRNEKVAS--PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHML 459
+ R ++A+ ++ A+ L T EN ++ +Y+ + G ++ + ML
Sbjct: 384 DADETRKSRIAALYQRDGAMSLRT---------SHENPEIKAVYEEFYGHPLSEMAEKML 434
Query: 460 NTSYHN 465
+T+Y +
Sbjct: 435 HTAYTD 440
>gi|289424003|ref|ZP_06425792.1| iron hydrogenase 1 [Peptostreptococcus anaerobius 653-L]
gi|289155578|gb|EFD04254.1| iron hydrogenase 1 [Peptostreptococcus anaerobius 653-L]
Length = 589
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 197/411 (47%), Gaps = 38/411 (9%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I DC C CIT H V + N+ K +IV + + P +
Sbjct: 183 IEQADCSLCGQCIT-----------HCPVGALTVRNDIDKVYRAMEDPSIVTVVQVAPAV 231
Query: 127 SLGAKFALSHEQVVAK---LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
L+ ++ A + K++G D V D + +++E EFL++F +G
Sbjct: 232 RTAWAERLNIDEKDASTNLMVAALKKIGFDYVFDTNFSADLTIMEEATEFLNKFTAGPME 291
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + + + + + Y+S KSPQQ+ G++ KT+ A+ L ++P I+ V+
Sbjct: 292 FPMFTSCCPGWVRFIKSQYPDLV-KYLSTAKSPQQMFGTIAKTYYAKLLNINPKKIFCVS 350
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA N+ +DVD VIT LE ++ +E + EE+ D P
Sbjct: 351 IMPCTAKKHEADIPSI-NDSEAPKDVDVVITTRGLEKMIRSENIKFDMLEEE--AFDMP- 406
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLR-NPDIREA 353
L G+G+G G V+ A+R G+ P + FK +R RE+
Sbjct: 407 ---------LGIGSGAGAIFGATGGVMEAALRSAYYFVTGKDPEPDAFKSVRGQKGWRES 457
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS 413
TF T+R +A+G +N + LI+ L RK + YDF+EIMACP GC GG Q +
Sbjct: 458 TFDIEGNTVRVAVASGLKNARRLIEALLRKEVSYDFVEIMACPGGCSGGGGQPIKDGQEL 517
Query: 414 PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
++ A +L I +A EN ++ +Y +LG ++ +L+T +
Sbjct: 518 AEKRAKKLYDIDKKMALRYSHENPSIIKVYDDYLGVPNSKLAHKLLHTDHE 568
>gi|333980350|ref|YP_004518295.1| hydrogenase, Fe-only [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823831|gb|AEG16494.1| hydrogenase, Fe-only [Desulfotomaculum kuznetsovii DSM 6115]
Length = 676
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 197/410 (48%), Gaps = 34/410 (8%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C++C C+ + +T +S EV KV + ++ K +V+ +A +++G +
Sbjct: 192 CVSCGQCVAVCPTGALTVKS--EVDKVW-------DAIHDPDKVVVVQVAPAVRVAIGEE 242
Query: 132 FAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSEC 189
F L E+ ++ +++G D V D + +E E L R GG PLFTS C
Sbjct: 243 FGLLPGEKATGQMVAALRKIGFDRVFDTLFTADMTTIEEGMELLGRLEKGGRLPLFTSCC 302
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
P WV YAE+ H + +L +S +SPQQ+ GSL+K H A ++G P + V++MPC KK
Sbjct: 303 PAWVKYAEQFHAD-LLENLSTCRSPQQMFGSLVKKHYAREIGRSPEQVVCVSVMPCTAKK 361
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRM 309
EA R +F G DVD V+T +EL ++ A E + + D P + +
Sbjct: 362 FEARRPEFTTG--GVPDVDFVLTTMELAQMIKE--AGIVFNELEPEVFDNPLGMGSGAAV 417
Query: 310 LLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFCIAN 368
+ SGG +V+ Q PG+ V+F P+R I+EA G L+ + N
Sbjct: 418 IY---GASGGVMESVVRFVAAQQSPGDVGRVDFYPVRGIQGIKEAELEIGGQNLKLAVVN 474
Query: 369 GFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETI--LC 426
G N + LI ++K Y +E+MACP GCL GG Q P TA L + L
Sbjct: 475 GLANAEKLINRIKSGEAFYHAVEVMACPGGCLGGGGQ------PYPNNTASRLGRMKGLY 528
Query: 427 DLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIA 472
L ++E P++N + + W GG + L+T Y+ P+ I+
Sbjct: 529 ALDRAEQLHRPQDNIFVTRALERWFGGPANANTHQALHTRYY--PRRRIS 576
>gi|256002756|gb|ACU52623.1| hydrogenase [Clostridium beijerinckii]
Length = 567
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 194/409 (47%), Gaps = 48/409 (11%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+ C C T + I +S + N KA N + +V +A ++LG
Sbjct: 187 TDCVNCGQCATVCPTGAIVVKSDIK--------NVWKAIYNHKQR-VVAQVAPAVRVALG 237
Query: 130 AKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFT 186
+F + E V+ K+ ++LG + + D ++ +++E EFL + S PLFT
Sbjct: 238 EEFGIKPGENVMGKIVAAMRKLGFENIYDTSLSADLTVIEESKEFLKKLESDDNKFPLFT 297
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV Y E + E +LPY+S KSP ++ GS++K + EK + V +MPC
Sbjct: 298 SCCPAWVRYVENKYPE-LLPYVSSCKSPMEMFGSVVKAYFKEKDSLENRETISVAVMPCT 356
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI-LDWPWDEHN 305
KK EA+R +F E + DVD VIT EL ++ ++ GI D E +
Sbjct: 357 AKKAEAAREEFIRENIP--DVDYVITTAELCAMI-----------KEIGIQFDEIEAEAS 403
Query: 306 PHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGD 359
+ L +G G +GG V+ I+ +EF +R ++ D
Sbjct: 404 DIPLSLYSGAGVIFGVTGGVTEAVIREVIKDKSSRVLKDIEFIGVRGMKGVKTCELQVKD 463
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
++R I +G RN +NLI+K+K +DFIE+MACP GC+ G Q + EK E
Sbjct: 464 ESIRIGIVSGLRNAENLIEKIKSGEEHFDFIEVMACPGGCIAGAGQPFGLMEEK----NE 519
Query: 417 TALELETI--LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
A L I + + +SE EN ++ LY+ L ++ K +L+ Y
Sbjct: 520 RAKGLYKIDKVTQIKRSE--ENLVVKSLYEGLLKNRT----KELLHVHY 562
>gi|333978446|ref|YP_004516391.1| hydrogenase, Fe-only [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821927|gb|AEG14590.1| hydrogenase, Fe-only [Desulfotomaculum kuznetsovii DSM 6115]
Length = 608
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 203/424 (47%), Gaps = 52/424 (12%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
DC++C C+ + +T++ + +EV + I + + K +V+ A ++L
Sbjct: 209 VDCISCGQCVMVCPTGALTEREYIDEVWRAIEDPD----------KFVVVQAAPAIQVTL 258
Query: 129 GAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLF 185
G F L VV KL +RLG D V +A ++VE +E L+R L G G PL
Sbjct: 259 GEAFGLGAGTVVRGKLAAALRRLGFDRVFTTELAADLTIVEEAHELLER-LKGHGKLPLI 317
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
+S PGWV + E + EF L +S KSP ++ G+L KT+ AEK G+ P + V +MPC
Sbjct: 318 SSCSPGWVKFCEHFYPEF-LDNLSTCKSPMEMFGALAKTYYAEKEGLDPKKMVVVGVMPC 376
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA+R + G RDVD V+T EL ++ A E D D P
Sbjct: 377 TAKKFEAARPELVTR--GLRDVDYVLTTRELARMIRQ--AGIRFDELADEEFDQP----- 427
Query: 306 PHRMLLVNGTGSG---GYAHNVLSHAIRQL--------CPGESPVVEFKPLRNPDIREAT 354
L TG+G V+ AIR P EF+ LR I+EA
Sbjct: 428 -----LGLSTGAGVIFAATGGVMEAAIRTAYALVEGRDLPTRLEFREFRGLRG--IKEAR 480
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ----IRNEK 410
+ TLR +A+G RN + L++++KR + FIEIMACP GC+ GG Q N +
Sbjct: 481 LKLKNQTLRLAVAHGTRNARRLLERIKRGE-KFHFIEIMACPGGCVGGGGQPILGRLNRR 539
Query: 411 VASPKETALELETIL--CDLAKSEPR--ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
A E ++ L DL K R EN ++ +Y+ +LG ++K K +L+T Y
Sbjct: 540 EAKMVERRMQRAQALYKIDLNKKLRRAHENPAVQQIYREFLGHPLSEKAKEILHTRYTPR 599
Query: 467 PKNN 470
+ N
Sbjct: 600 GRTN 603
>gi|304440540|ref|ZP_07400427.1| ferredoxin hydrogenase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371018|gb|EFM24637.1| ferredoxin hydrogenase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 577
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 206/418 (49%), Gaps = 41/418 (9%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I +C C CIT ++++ E A A +E TKT+V+ +A
Sbjct: 182 KIEDANCSLCGQCITHCPVGALSERDDTE--------KAWNALEDE-TKTVVVQVAPAVR 232
Query: 126 LSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG--- 181
S + LS E+ V K+ K++G D V D +++E +EFL+RF +G
Sbjct: 233 ASWAEQMGLSEEEAPVGKIFDALKKMGADYVFDTVFGADLTIMEEASEFLERFTAGDLKE 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + K+ +L +S KSPQQ+ G+++K++ AEK+G +P+ I ++
Sbjct: 293 RPMFTSCCPGWVRFV-KTEFPHMLSSLSTAKSPQQMFGAVMKSYFAEKIGKNPNDIVAIS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK E +Y E G+ + D VIT EL ++ + + E + P
Sbjct: 352 VMPCVAKKAEREMDMYYGEFAGH-ETDIVITTRELTRMIKSAHINVSNLE------NIPS 404
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRN------P 348
D NP + +GTG+G G V+ A+R GE+P + F +RN
Sbjct: 405 D--NP----MEDGTGAGVIFGATGGVMEAALRTAYFTLKGENPPNDAFLRVRNDGSKDGS 458
Query: 349 DIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
IRE+ F V +R + +G N + L++++ + YDF+E+MACP GC+ GG QI +
Sbjct: 459 GIRESEFDIDGVKVRTAVVSGLGNTRELLERIDKGEANYDFVEVMACPGGCVGGGGQIIH 518
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
+ E +L + + +N ++ LY +LG + K HML + H I
Sbjct: 519 DGQEKAFERGKKLYKLDDNYEYRCSHDNPDIKKLYDEYLGKPLSFKA-HMLLHTEHKI 575
>gi|350566056|ref|ZP_08934763.1| ferredoxin hydrogenase [Peptoniphilus indolicus ATCC 29427]
gi|348663157|gb|EGY79763.1| ferredoxin hydrogenase [Peptoniphilus indolicus ATCC 29427]
Length = 592
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 184/362 (50%), Gaps = 46/362 (12%)
Query: 127 SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG---G 182
S G + L E V K+ K++GVD V D + +++E NEFLDRF +
Sbjct: 234 SWGEEIGLEIKEATVNKIFDALKKIGVDYVFDTAYSADLTIMEEANEFLDRFNNNELDER 293
Query: 183 PLFTSECPGWVCYAEKSHGEF--ILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+FTS CPGW+ + + G+F ++P +S KSP Q+ GS++KT+ AEK+G P +IY V
Sbjct: 294 PMFTSCCPGWLRFIK---GQFPHLVPQLSTAKSPMQMFGSVMKTYFAEKIGKKPENIYSV 350
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQE-EKDGILD 298
+MPC KK E+ FY E G+ D DCVIT EL +L A + + TL++ E D + +
Sbjct: 351 AVMPCLAKKGESEMELFYEEYAGH-DTDCVITTRELVRMLRAAHINSNTLEDIEPDKLFE 409
Query: 299 WPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR--------QLCPGESPVVEFKPLRN 347
+G+G G V+ A+R + C ++ V ++
Sbjct: 410 --------------KSSGAGVIFGATGGVMEAALRTAYYTIMGENCSPDAFEVVRAESQD 455
Query: 348 PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
+ EA+F V LR NG N + LI++++R YDF+E+MACP GC+ GG Q
Sbjct: 456 TGVSEASFNLNGVELRVAAVNGLGNARKLIEEIERGEKKYDFVEVMACPGGCVGGGGQ-- 513
Query: 408 NEKVASPKETALELETILCDL-AKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ E A E L L KSE R EN ++ LY+ + ++ K HML +
Sbjct: 514 --PIHDGDELAFERGKNLYFLDKKSELRYSHENEDVKSLYENYFDKPNSHKA-HMLLHTD 570
Query: 464 HN 465
HN
Sbjct: 571 HN 572
>gi|332296990|ref|YP_004438912.1| hydrogenase, Fe-only [Treponema brennaborense DSM 12168]
gi|332180093|gb|AEE15781.1| hydrogenase, Fe-only [Treponema brennaborense DSM 12168]
Length = 580
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 202/431 (46%), Gaps = 37/431 (8%)
Query: 50 AYIQETNGREEK-----LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNA 104
A+ E +GR +K + +++ + C+ C C +H V + N
Sbjct: 162 AWALEYSGRGDKTVIGPVAGAKLADSPCIKCGQC-----------AAHCPVGAITTHNPL 210
Query: 105 HKASSNENTKTIVLSLAIQPVL--SLGAKFALSHEQVVA-KLCGFFKRLGVDLVLDVGIA 161
+ + +T+ ++ I P + +LG +F L + K+ + +G V D A
Sbjct: 211 QELWNKLADETLTSAVQIAPSVRAALGEEFDLPVGTITTQKIYTALRMMGFKYVFDTNFA 270
Query: 162 HCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGS 220
+++E E ++R GG P+FTS CPGWV YAEK H +LP++S KSPQQ+ G+
Sbjct: 271 ADLTIMEEGTELVERLTKGGALPMFTSCCPGWVDYAEK-HYHDMLPHLSTAKSPQQMQGA 329
Query: 221 LIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL 280
+ KT+ AE+ G+ P I+ V++MPC K EA R D G DVD V+T EL +L+
Sbjct: 330 VTKTYWAEQAGLKPEQIFSVSIMPCTAKAYEARRNDDMKSS-GASDVDLVLTTRELAMLI 388
Query: 281 ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVV 340
A ++ D P ++ + +GG + A + E +
Sbjct: 389 RQ--AGIDFVNLEESAADNPLGPYSGAGTIF---GATGGVMEAAVRTAYALVTKKELGNI 443
Query: 341 EFKPLRNPDIREATFTCGDVT-LRFCIANGFRNIQNLIQKLKR-----KRLPYDFIEIMA 394
P+R + +A+ D T +R + + N+ ++Q+++ K PY FIE+MA
Sbjct: 444 NLTPVRGLEAVKASEIDLDGTKIRVAVVHQMGNVDKVVQQVREALAAGKEPPYHFIEVMA 503
Query: 395 CPSGCLNGGAQI--RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKST 452
C GC+ GG Q ++V S + AL + C + S +N + LY +LG +
Sbjct: 504 CRGGCVAGGGQPYGATDEVRSKRAAALYRDDDDCAVRVSH--KNPEIVKLYDRFLGKPCS 561
Query: 453 DKGKHMLNTSY 463
+K H+L+T Y
Sbjct: 562 EKSHHLLHTKY 572
>gi|325662495|ref|ZP_08151098.1| hypothetical protein HMPREF0490_01838 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471191|gb|EGC74416.1| hypothetical protein HMPREF0490_01838 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 584
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 215/446 (48%), Gaps = 55/446 (12%)
Query: 44 RIQDDGAYIQETNGREEKL---KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIR 100
+IQ + E+ G + K +I DC C CIT H V +
Sbjct: 160 KIQSLNIWDVESTGSRTTVHVSKNRKIEDADCSLCGQCIT-----------HCPVGALRE 208
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALS---HEQVVAKLCGFFKRLGVDLVLD 157
++ K S K V + I P + AL E V K+ +++G D V D
Sbjct: 209 RDDTEKVWSALADKKKVTVVQIAPAVRAAWGEALGMKREEATVGKIVDALRKIGFDYVFD 268
Query: 158 VGIAHCFSLVELENEFLDRFLSG---GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSP 214
+ +++E EFL+R +G P+FTS CPGW+ + KS ++P +S KSP
Sbjct: 269 TAFSADLTIMEEGAEFLERLQNGELKDRPMFTSCCPGWIRFI-KSQYPHLVPQLSSAKSP 327
Query: 215 QQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAV 274
QQ+ G+++KT+ A+ +GV P +I V++MPC KK E + FY E G+ DVD V+T
Sbjct: 328 QQMFGAVMKTYFAKSIGVDPENICTVSIMPCLAKKGERNMELFYEEYAGH-DVDIVLTTR 386
Query: 275 EL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR 330
EL ++ + +A +TL +D P D L+ +G+G+G G V+ A+R
Sbjct: 387 ELVRMIRSAHIAPSTL-------VDAPCD------TLMQDGSGAGVIFGATGGVMEAALR 433
Query: 331 Q---LCPGESPVVE-FKPLRNPDIRE----ATFTCGDVTLRFCIANGFRNIQNLIQKLKR 382
L G++P + F +R+ ++ A GD +R + +G N + LI+ ++R
Sbjct: 434 SAYFLVTGKNPDADAFSVVRSNNLNHGAVCAEIPIGDTVVRAAVVSGLGNARQLIEMIER 493
Query: 383 KRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSE----PRENAT 438
+ YDF+E+MACP GC+ GG Q + +E ALE L L K+ EN
Sbjct: 494 GDVHYDFVEVMACPGGCVGGGGQ----PIHDGQELALERGKNLYFLDKNANIRFSHENKD 549
Query: 439 LEHLYKAWLGGKSTDKGKHMLNTSYH 464
+ LY+ ++G + K +L+T ++
Sbjct: 550 VLKLYEDFMGKPLSHKAHLLLHTDHN 575
>gi|312144188|ref|YP_003995634.1| hydrogenase, Fe-only [Halanaerobium hydrogeniformans]
gi|311904839|gb|ADQ15280.1| hydrogenase, Fe-only [Halanaerobium hydrogeniformans]
Length = 574
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 191/411 (46%), Gaps = 42/411 (10%)
Query: 71 DCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
+C C C + I ++S E V + ++ H +++ A +LG
Sbjct: 194 NCANCGQCASVCPVGAINEKSEIENVWAALEDDEKH----------VIVQTAPSIQATLG 243
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFT 186
+F +++ VV K+ +RLG D V A +++E +EFL + L G G P T
Sbjct: 244 EEFDITNGTVVTGKMVAALRRLGFDKVFSTDFAADLTILEEGSEFLKK-LEGEGTLPHIT 302
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV YAE ++ + +L ++S KSP Q+ +L KT+ ++ GV +Y V +MPC
Sbjct: 303 SCCPGWVKYAEHNYSD-LLNHLSTAKSPMQMFSALGKTYYPQQSGVKAKDVYTVAIMPCT 361
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R + ++D D V+T EL ++ + +++D +DE
Sbjct: 362 AKKFEKDREEINATR--FKDTDAVLTTRELARMIKEMGINFSKLDDED------FDE--- 410
Query: 307 HRMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLR--NPDIREATFT---CG 358
L+ TG+G G V A+R + + +PL N R F G
Sbjct: 411 ---LMGTSTGAGTIFGTTGGVAEAAVRTV----KEKLTGEPLEQLNLGFRGVNFAEVEIG 463
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
D T++ IANG N + L+ K DFIE+MACP GC+ GG Q R +
Sbjct: 464 DRTVKIAIANGLGNAEKLLNACKDGNCDCDFIEVMACPHGCVGGGGQPRPATYEKKVKRG 523
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
+ L I A + +N + LYK +LG + + H+L+T+Y + PKN
Sbjct: 524 VGLSGIDDKSAVRKSHKNPQVIKLYKEFLGKPLSGESHHLLHTTYKSRPKN 574
>gi|148269859|ref|YP_001244319.1| hydrogenase, Fe-only [Thermotoga petrophila RKU-1]
gi|147735403|gb|ABQ46743.1| hydrogenase, Fe-only [Thermotoga petrophila RKU-1]
Length = 582
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 201/409 (49%), Gaps = 38/409 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+ C C + I + S +KV+ E K K +V+ A +++G
Sbjct: 189 TDCIGCGQCAAFCPTGAIVENS---AVKVVLEELEKKE------KILVVQTAPSVRVAIG 239
Query: 130 AKFA-----LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
+F +S Q+VA L +RLG D V D +++E +EFL+R G
Sbjct: 240 EEFGYAPGTISTGQMVAAL----RRLGFDYVFDTNFGADLTIMEEGSEFLERLEKGDLED 295
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV EK + E + +S KSPQ ++ +L+KT+ AEKLGV P I+HV+
Sbjct: 296 LPMFTSCCPGWVNLVEKVYPE-LRTRLSSAKSPQGMLSALVKTYFAEKLGVKPEDIFHVS 354
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA R G VD V+T EL L+ + +K + P
Sbjct: 355 IMPCTAKKDEALRKQLMVN--GVPAVDVVLTTRELGKLI---------RMKKIPFANLPE 403
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIR---QLCPGES-PVVEFKPLRN-PDIREATFT 356
+E++ + G V+ A+R +L G++ P + F+ +R ++EA
Sbjct: 404 EEYDAPLGISTGAAVLFGVTGGVMEAALRTAYELKTGKTLPKIVFEDVRGLKGVKEAEID 463
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
+R + +G N++NL++K+ R+ + Y F+E+MACP GC+ GG Q + ++
Sbjct: 464 LDGKKIRIAVVHGTANVRNLVEKILRREVKYHFVEVMACPGGCIGGGGQPYSRDPEILRK 523
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
A + TI + + EN ++ LY+ +L + K +L+T Y +
Sbjct: 524 RAEAIYTIDERMVLRKSHENPAIKKLYEEYLEHPLSHKAHELLHTYYED 572
>gi|225175926|ref|ZP_03729918.1| hydrogenase, Fe-only [Dethiobacter alkaliphilus AHT 1]
gi|225168514|gb|EEG77316.1| hydrogenase, Fe-only [Dethiobacter alkaliphilus AHT 1]
Length = 574
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 191/404 (47%), Gaps = 28/404 (6%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C T+ I ++S ++V + I + N H +V+ A +S+
Sbjct: 191 CVQCGQCATTCPVGAIYEKSVVDDVWQAIADPNKH----------VVVQAAPAVQVSIAE 240
Query: 131 KFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
L +A K+ +RLG D V +++E E L R + G PL TS
Sbjct: 241 ALGLEPGTPMAGKMAAALRRLGFDRVFTTEFTADLTILEEGTELLGRLKNNGALPLITSC 300
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGW+ + E + E +L +S KSPQQ+ G+L KT+ AEK G+ PS IY V+LMPC K
Sbjct: 301 SPGWIKFIEHNFPE-LLENLSTCKSPQQMFGALAKTYYAEKNGIDPSKIYSVSLMPCTAK 359
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K EA+R + + GYRDVD VIT EL ++ A+ + + D D P+
Sbjct: 360 KYEAARPEMNSS--GYRDVDAVITTRELARMIHE--ASLDINKLADEQFDAPFGMLTGAA 415
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIA 367
+ GT +GG A L + E P +E++P+R D I+E++ G ++ +
Sbjct: 416 TIF--GT-TGGVAEAALRTLYELVNGQEMPTMEYEPVRGLDGIKESSVNLGGTDVKIAVT 472
Query: 368 NGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCD 427
+G N + ++ ++K Y FIEIMA G + K S A D
Sbjct: 473 SGLANAREVLNRVKNGEAEYHFIEIMA--CPGGCIGGGGQPIKNGSDNRVARAASIYKVD 530
Query: 428 LAK--SEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
A + EN+ ++ LYK +LG ++ K +L+T Y P+N
Sbjct: 531 AANRVRKSHENSAVKQLYKEYLGEPNSHKAHDLLHTHY--TPRN 572
>gi|222099459|ref|YP_002534027.1| NADP-reducing hydrogenase, subunit D [Thermotoga neapolitana DSM
4359]
gi|221571849|gb|ACM22661.1| NADP-reducing hydrogenase, subunit D [Thermotoga neapolitana DSM
4359]
Length = 600
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 198/405 (48%), Gaps = 30/405 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+ C C + I + S +KV+ E K K +V+ A +++G
Sbjct: 207 TDCIGCGQCAVFCPTGAIVENS---AVKVVLEELEKKE------KILVVQTAPSVRVAIG 257
Query: 130 AKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG---PLF 185
+F + V +L +RLG D V D +++E +EFL+R G P+F
Sbjct: 258 EEFGYAPGTVSTGQLVAALRRLGFDYVFDTNFGADLTIMEEGSEFLERLEKGDLEDLPMF 317
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CPGWV EK + E + +S KSPQ ++ +L+KT+ AEKLGV P I+HV++MPC
Sbjct: 318 TSCCPGWVNLVEKVYPE-LRTRLSSAKSPQGMLSALVKTYFAEKLGVKPEDIFHVSIMPC 376
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA R G VD V+T EL L+ + +K + P +E++
Sbjct: 377 TAKKDEAMRKQLMVN--GVPAVDVVLTTRELGKLI---------RIKKIPFANLPEEEYD 425
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIR---QLCPGES-PVVEFKPLRN-PDIREATFTCGDV 360
+ G V+ A+R +L G++ P + F+ +R ++EA
Sbjct: 426 APLGISTGAAALFGVTGGVMEAALRTAYELKTGKTLPKLVFEDVRGLKGVKEAEVELDGQ 485
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALE 420
+R + +G N++NL++K+ R+ + Y F+E+MACP GC+ GG Q + ++ A
Sbjct: 486 KIRVAVVHGTANVRNLVEKILRREVKYHFVEVMACPGGCIGGGGQPYSRDPEVLRKRAEA 545
Query: 421 LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ TI + + EN ++ LY+ +L + + +L+T Y +
Sbjct: 546 IYTIDERMTIRKSHENPAIKKLYEEYLEHPLSHRAHELLHTYYED 590
>gi|256086412|ref|XP_002579393.1| hypothetical protein [Schistosoma mansoni]
gi|353229755|emb|CCD75926.1| let1/narf-related [Schistosoma mansoni]
Length = 436
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 184/437 (42%), Gaps = 138/437 (31%)
Query: 150 LGVDLVLDVGIAHCFSLVELENEFLDRF------LSGGGPLFTSECPGWVCYAEKS---- 199
+GV LV DV A L E EF++ F + PLF+S CPGW+CYAEKS
Sbjct: 15 IGVHLVTDVTWARDICLYEAGLEFIEHFKKRDDKCTDTLPLFSSICPGWICYAEKSPLTS 74
Query: 200 -------HGEF-ILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLE 251
+ EF I+P+IS V+SPQQ+ G +IK EK +HV++MPC+DKKLE
Sbjct: 75 SILSSSGYREFSIIPHISNVRSPQQIAGRVIKLLGEEK-------CFHVSIMPCFDKKLE 127
Query: 252 ASRADFYN-----EELGYRDVDCVITAVELEVLLAN------------------------ 282
ASR +F + DVD V+ EL L +
Sbjct: 128 ASRVEFSVPSKSISDFYVPDVDLVLATNELLCFLESLIDESNDTVSFSFAEHTSEVGESQ 187
Query: 283 --------ELATTTLQEEKDGIL--DWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQL 332
E+ + +EK G+ +P + M +G+GSGGYA +L A +L
Sbjct: 188 RLILERLYEIFCVKMSQEKTGVAFDHFPLRVNKMLPMYRHSGSGSGGYAACILKMAAEEL 247
Query: 333 CPGESPVVEFKP------------LRNPDIREATF------------------------- 355
V+ KP L+N DI+E
Sbjct: 248 FS-----VKLKPDILKDERVLTRYLQNRDIQELILFNSKEDRSLAESLLSSLSNRTPYRH 302
Query: 356 --TCGDVTLRFCIANGFRNIQNLIQKLKRK-------------------RLPYDFIEIMA 394
T L F IANGFRNIQ ++Q L++ P+D++E+MA
Sbjct: 303 FETQPKAMLVFGIANGFRNIQTIVQYLRKTYQFKKCDDPDLIKSRQIKVHYPFDYVEVMA 362
Query: 395 CPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDK 454
CP+GCLNGG Q+ KE + + L EP N +++LY+ KS D
Sbjct: 363 CPNGCLNGGGQV--------KEIMAQTSELYASLPVFEPMSNDLVKNLYEYI---KSKDP 411
Query: 455 GKHMLNTSYHNIPKNNI 471
L+T+Y +PK I
Sbjct: 412 DLKYLHTTYKTVPKIEI 428
>gi|281412258|ref|YP_003346337.1| hydrogenase, Fe-only [Thermotoga naphthophila RKU-10]
gi|281373361|gb|ADA66923.1| hydrogenase, Fe-only [Thermotoga naphthophila RKU-10]
Length = 582
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 198/405 (48%), Gaps = 30/405 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+ C C + I + S +KV+ E K K +V+ A +++G
Sbjct: 189 TDCIGCGQCAAFCPTGAIVENSS---VKVVLEELEKKE------KILVVQTAPSVRVAIG 239
Query: 130 AKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG---PLF 185
+F + + +L +RLG D V D +++E +EFL+R G P+F
Sbjct: 240 EEFGYAPGTISTGQLVAALRRLGFDYVFDTNFGADLTIMEEGSEFLERLEKGDLEDLPMF 299
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CPGWV EK++ E + +S KSPQ ++ +L+KT+ AEKLGV P I+HV++MPC
Sbjct: 300 TSCCPGWVNLVEKAYPE-LRTRLSSAKSPQGMLSALVKTYFAEKLGVKPEDIFHVSIMPC 358
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA R G VD V+T EL L+ + +K + P +E++
Sbjct: 359 TAKKDEALRKQLMVN--GVPAVDVVLTTRELGKLI---------RMKKIPFANLPEEEYD 407
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIR---QLCPGES-PVVEFKPLRN-PDIREATFTCGDV 360
+ G V+ A+R +L G++ P + F+ +R +REA
Sbjct: 408 APLGISTGAAVLFGVTGGVMEAALRTAYELKTGKTLPKIVFEEVRGLKGVREAEIDLDGK 467
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALE 420
++ + +G N +NL++K+ R+ + Y F+E+MACP GC+ GG Q + ++ A
Sbjct: 468 KIKIAVVHGTANARNLVEKILRREVKYHFVEVMACPGGCIGGGGQPYSRDPEILRKRAEA 527
Query: 421 LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ TI + + EN ++ LY+ +L + K +L+T Y +
Sbjct: 528 IYTIDERMVLRKSHENPAIKKLYEEYLEHPLSHKAHELLHTYYED 572
>gi|357055534|ref|ZP_09116602.1| hypothetical protein HMPREF9467_03574 [Clostridium clostridioforme
2_1_49FAA]
gi|355382653|gb|EHG29750.1| hypothetical protein HMPREF9467_03574 [Clostridium clostridioforme
2_1_49FAA]
Length = 451
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 191/419 (45%), Gaps = 52/419 (12%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C I +SH EV++ I N+ K +V S A + LG
Sbjct: 55 CIHCGQCAAVCPERAIRGKSHWREVVRAI----------NDPQKIVVFSTAPSVRVGLGE 104
Query: 131 KFA-LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTS 187
F + V ++ + LG D VLDV + +++E EFL RFL+G PL FTS
Sbjct: 105 CFGGRPGDFVEGRMVSALRELGADYVLDVAFSADLTIMEEGTEFLRRFLTGSHPLPQFTS 164
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV Y E H E I +S KSP + G+LIKT+ A + G+ P I +V + PC
Sbjct: 165 CCPAWVKYVETFHPERI-GCLSSAKSPISMQGALIKTYFAREQGIDPGRIVNVAVAPCTA 223
Query: 248 KKLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E SR + Y G D D V+T EL + + GI + D
Sbjct: 224 KKFEISREELCSSGIYQGIPGLMDNDYVLTTRELAEWIT-----------ESGIEFYGLD 272
Query: 303 EHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGESPV---VEFKPLRNPD-IRE 352
+ L+ G+G+G G V+ A+R + G+ P+ ++++P+R D ++E
Sbjct: 273 PSS-FDSLMGEGSGAGVIFGNTGGVMEAALRMAYSVVSGKEPMDLLLKYRPVRGLDQVKE 331
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
+ G +R + G R + LI YDF+E+M CP GC++GG Q N +
Sbjct: 332 TVVSLGGRDVRAAVIYGTRAAEQLIGTGNID--SYDFVEVMTCPGGCISGGGQPDNGVLP 389
Query: 413 SPKETALELETILCDLAKSEPR------ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
P L +E I E R +N ++ LY+ +LG + + +L+T YH
Sbjct: 390 VPDR--LRMERIKSLYRADEQRMVRSSLDNREIKRLYERFLGEPMGELAQTLLHTCYHG 446
>gi|331086277|ref|ZP_08335357.1| hypothetical protein HMPREF0987_01660 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406043|gb|EGG85566.1| hypothetical protein HMPREF0987_01660 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 584
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 215/446 (48%), Gaps = 55/446 (12%)
Query: 44 RIQDDGAYIQETNGREEKL---KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIR 100
+IQ + E+ G + K +I DC C CIT H V +
Sbjct: 160 KIQSLNIWDVESTGSRTTVHVSKNRKIEDADCSLCGQCIT-----------HCPVGALRE 208
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALS---HEQVVAKLCGFFKRLGVDLVLD 157
++ K S K + + I P + AL E V K+ +++G D V D
Sbjct: 209 RDDTEKVWSALANKKKITVVQIAPAVRAAWGEALGMKREEATVGKIVDALRKIGFDYVFD 268
Query: 158 VGIAHCFSLVELENEFLDRFLSG---GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSP 214
+ +++E EFL+R +G P+FTS CPGW+ + KS ++P +S KSP
Sbjct: 269 TAFSADLTIMEEGAEFLERLQNGELKDRPMFTSCCPGWIRFI-KSQYPHLVPQLSSAKSP 327
Query: 215 QQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAV 274
QQ+ G+++KT+ A+ +GV P +I V++MPC KK E + FY E G+ DVD V+T
Sbjct: 328 QQMFGAVMKTYFAKSIGVDPENICTVSIMPCLAKKGERNMELFYEEYAGH-DVDIVLTTR 386
Query: 275 EL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR 330
EL ++ + +A +TL +D P D L+ +G+G+G G V+ A+R
Sbjct: 387 ELVRMIRSAHIAPSTL-------VDAPCD------TLMQDGSGAGVIFGATGGVMEAALR 433
Query: 331 Q---LCPGESPVVE-FKPLRNPDIRE----ATFTCGDVTLRFCIANGFRNIQNLIQKLKR 382
L G++P + F +R+ ++ A GD +R + +G N + LI+ ++R
Sbjct: 434 SAYFLVTGKNPDADAFSVVRSNNLNHGAVCAEIPIGDTVVRAAVVSGLGNARQLIEMIER 493
Query: 383 KRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSE----PRENAT 438
+ YDF+E+MACP GC+ GG Q + +E ALE L L K+ EN
Sbjct: 494 GDVHYDFVEVMACPGGCVGGGGQ----PIHDGQELALERGKNLYFLDKNANIRFSHENKD 549
Query: 439 LEHLYKAWLGGKSTDKGKHMLNTSYH 464
+ LY+ ++G + K +L+T ++
Sbjct: 550 VLKLYEDFMGKPLSHKAHLLLHTDHN 575
>gi|313900506|ref|ZP_07833999.1| putative ferredoxin hydrogenase [Clostridium sp. HGF2]
gi|373124465|ref|ZP_09538306.1| hydrogenase, Fe-only [Erysipelotrichaceae bacterium 21_3]
gi|422326519|ref|ZP_16407547.1| hydrogenase, Fe-only [Erysipelotrichaceae bacterium 6_1_45]
gi|312954568|gb|EFR36243.1| putative ferredoxin hydrogenase [Clostridium sp. HGF2]
gi|371659433|gb|EHO24698.1| hydrogenase, Fe-only [Erysipelotrichaceae bacterium 21_3]
gi|371666098|gb|EHO31255.1| hydrogenase, Fe-only [Erysipelotrichaceae bacterium 6_1_45]
Length = 577
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 198/414 (47%), Gaps = 46/414 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I +C C CIT + V ++ A+ N+ K ++ +A
Sbjct: 183 IEEAECSLCGQCITHCPV---------NALHVREDSERAFAAFNDPDKITIVQIAPAVRA 233
Query: 127 SLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--- 182
+ G L E+ + KL F+R+G D V D A +++E +EFL+R
Sbjct: 234 AWGESLGLRREEATIEKLGDAFRRMGADYVFDTDFAADLTIMEEASEFLERLHHNKEQEM 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CPGWV + + + + + ++S KSP Q+ G++ KT AEKLGV PS IY++++
Sbjct: 294 PMFTSCCPGWVRFLKSQYPDMV-SHLSTSKSPHQMFGAVTKTWFAEKLGVDPSSIYNISV 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPW 301
MPC KK E + GYRDVD V+T E+ ++ A + LQ D LD P
Sbjct: 353 MPCVAKKHEIDIPVMNDS--GYRDVDVVLTTREVVRMIHAEHIDVGYLQ---DHPLDDP- 406
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREA 353
L +G+G G V+ A+R GE+ + F +R D +E+
Sbjct: 407 ---------LGTASGAGVIFGATGGVMEAALRSAYYFVTGENADADAFADVRGMDGWKES 457
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS 413
TF + +R I +G N + LI+ ++RK + YDFIE+MACP GC GG Q +
Sbjct: 458 TFEIQGIPVRCAIVSGLGNTRRLIEAMRRKEVAYDFIEVMACPGGCSGGGGQ----PIHD 513
Query: 414 PKETALELETILCDLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+E A E L L ++ EN ++ LY +LG ++ + +L+T +
Sbjct: 514 GEELAAERADTLYHLDRNAKLRYSHENPSIHALYDEYLGKPLSELAEKLLHTDH 567
>gi|325291003|ref|YP_004267184.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Syntrophobotulus glycolicus DSM 8271]
gi|324966404|gb|ADY57183.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Syntrophobotulus glycolicus DSM 8271]
Length = 577
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 200/424 (47%), Gaps = 41/424 (9%)
Query: 55 TNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTK 114
T EEKL + +C+ C CI ++++ +++ EN+
Sbjct: 178 TTPYEEKL-----TARNCINCGQCIKVCPVGALSERDDTDLVWAALENSEL--------- 223
Query: 115 TIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
+V+ A ++LG +F L V K+ K+LG D V D + +++E E
Sbjct: 224 NVVVQTAPAVRIALGEEFGLPVGTDVEGKMVTALKKLGFDKVFDTNFSADLTIMEEGTEL 283
Query: 174 LDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
+ R +GG PL TS PGW+ + E + +F L +S KSPQQ+ G++ K++ EK G+
Sbjct: 284 ISRINNGGKLPLITSCSPGWIKFCEHKYPDF-LDNLSSCKSPQQMFGAVAKSYYPEKAGI 342
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEE 292
P ++ V++MPC KK EA R + +EL +D+D IT EL ++ A +
Sbjct: 343 DPKKVFVVSVMPCTAKKYEADREELVVDEL--KDIDVAITTRELAKMIKQ--AGIQFTDL 398
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIR---QLCPGES-PVVEFKPLRNP 348
D D E ++ N G V+ AIR + GE +++ +R
Sbjct: 399 ADSKADSMMGEGTGAAVIFANTGG-------VMEAAIRTVADILTGEDLKDIDYIAVRGQ 451
Query: 349 D-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-I 406
+ I+EA+ GD+ L+ +AN L+ K++ Y FIEIM C GC+NGG Q I
Sbjct: 452 EGIKEASVNIGDLELKVAVANSTGAASKLLDKIRAGESTYHFIEIMGCAGGCINGGGQPI 511
Query: 407 RNEKVASPKETALELETI-LCDLAKSEPR----ENATLEHLYKAWLGGKSTDKGKHMLNT 461
+K S E +L T + + K+ P+ +N ++ LY +L + K H+L+T
Sbjct: 512 IMDK--SKTEEVKQLRTAGIYNKDKNNPKRKSHKNEEIQKLYAEYLDKPGSHKAHHILHT 569
Query: 462 SYHN 465
Y N
Sbjct: 570 HYVN 573
>gi|118443000|ref|YP_877778.1| hydrogenase (Fe) large chain [Clostridium novyi NT]
gi|118133456|gb|ABK60500.1| hydrogenase (Fe) large chain [Clostridium novyi NT]
Length = 443
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 191/405 (47%), Gaps = 29/405 (7%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I T C+ C CI++ + + + I E K + N+ K ++ +A
Sbjct: 58 IDTTKCVKCGQCISACPMGALPK------INFISE---AKKALNQKDKLVITQVAPAIRA 108
Query: 127 SLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
+LG F L +V K+ + +G D V D A +++E EF R GG P+
Sbjct: 109 TLGEYFGLEPGTLVTGKMVAALRAIGFDKVFDTDFAADLTIMEEATEFAHRLKHGGKLPI 168
Query: 185 FTSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
TS CPGW+ + E + +P S KSPQQ+ G++ KT+ A+K+ + P I V++M
Sbjct: 169 LTSCCPGWINFFEHDFRDLADIP--SSCKSPQQMFGTIAKTYFAQKMNIEPKDIIVVSIM 226
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWD 302
PC KK EA+R + + G RDVD VI+ EL E++ N + +L+++ D P
Sbjct: 227 PCLAKKYEAARPEMTTD--GTRDVDIVISTQELAELIKENNIDFNSLEDDD---FDKPLG 281
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVT 361
E + + GT SGG A + A + P +EFK +R + ++EA
Sbjct: 282 ESSGAGTIF--GT-SGGVAEAAIRTAYELITNETIPALEFKGVRGLNGLKEAEVEINGEK 338
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNE-KVASPKETA 418
++ IANG + L+ ++ Y IEIMAC GC+ G Q I+N + + A
Sbjct: 339 IKIAIANGLATARELLNSIRNGEKNYHLIEIMACQGGCIGSGMQPFIKNHCNIIQKRSEA 398
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L E L KS EN + +Y+ +LG +K L+T Y
Sbjct: 399 LYSEDRHKTLRKS--HENPYVLKIYEEFLGEPYGEKAHKYLHTEY 441
>gi|332799825|ref|YP_004461324.1| hydrogenase, Fe-only [Tepidanaerobacter acetatoxydans Re1]
gi|438003089|ref|YP_007272832.1| Periplasmic [Fe] hydrogenase large subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332697560|gb|AEE92017.1| hydrogenase, Fe-only [Tepidanaerobacter acetatoxydans Re1]
gi|432179883|emb|CCP26856.1| Periplasmic [Fe] hydrogenase large subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 584
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 203/419 (48%), Gaps = 49/419 (11%)
Query: 65 VEISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
+ +S C+ C CI + L + ++V K + + K +++ A
Sbjct: 184 MSLSEVSCVNCGQCIMACPVGALKEKDDTDKVWKALADPE----------KYVIVQTAPA 233
Query: 124 PVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
+SLG +F +V K L +RLG D V D + +++E +EFLDR +GG
Sbjct: 234 IRVSLGEEFGGELGTIVTKKLPAALRRLGFDKVFDTDFSADLTILEEGSEFLDRLQNGGK 293
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
PL TS PGW+ + E + EF L +S KSPQQ+ G+L+KT+ AEK+G+ PS I+ V+
Sbjct: 294 LPLITSCSPGWIKFCEHYYPEF-LDNLSTCKSPQQMFGALVKTYYAEKMGIDPSKIFSVS 352
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK E R + ++ GY+DVD +T EL +L A + D D P
Sbjct: 353 IMPCTAKKYECKRPEMFSS--GYQDVDVALTTRELSRMLKE--AGINPNKLPDEEFDEP- 407
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD--------- 349
L TG+G G V+ A+R + +V K L+N D
Sbjct: 408 ---------LGISTGAGAIFGATGGVMEAALRTV----YEIVTKKELKNIDFTEVRGVEG 454
Query: 350 IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---I 406
++EAT + + +A+G N + ++ ++K Y FIEIMACP GC+ GG Q
Sbjct: 455 VKEATIDIEGIKVNIAVAHGLSNARAVLDRVKNGEANYHFIEIMACPGGCVGGGGQPILS 514
Query: 407 RNEKVASP--KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+E+ + +E A + + ++ + EN ++ LYK +LG +K +L+T Y
Sbjct: 515 ADERWEADYREERAKAIYEVDRNMPLRKSHENPAVKALYKEFLGEPLGEKSHELLHTHY 573
>gi|303246230|ref|ZP_07332510.1| hydrogenase, Fe-only [Desulfovibrio fructosovorans JJ]
gi|302492293|gb|EFL52165.1| hydrogenase, Fe-only [Desulfovibrio fructosovorans JJ]
Length = 688
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 171/354 (48%), Gaps = 11/354 (3%)
Query: 115 TIVLSLAIQPVLSLGAKF-ALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
T+V +A + LG F A + ++ +L K +G D V D A +++E EF
Sbjct: 227 TVVAQIAPAVRVGLGECFGAAPGDPIMGRLVAAMKTIGFDQVYDTTFAADLTVIEEAEEF 286
Query: 174 LDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGV 232
L R +G P FTS CPGWV +AE+ + E +LP +S +SPQQ+ GSL+K L E+LG+
Sbjct: 287 LARKAAGEKLPQFTSCCPGWVQFAEQYYPE-LLPNLSSCRSPQQMFGSLVKEMLPEQLGI 345
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEE 292
+ V++MPC KK EA R +F + G DVD V+T E+ ++ E A +
Sbjct: 346 PRKKLAIVSVMPCTAKKFEARRPEFAKD--GSPDVDNVLTTQEMARMI--EQAGLRFNDL 401
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IR 351
+ D P+ ++ GT +GG VL +A ++ +F +R +R
Sbjct: 402 EPQSRDMPYGFGTGAGVIF--GT-TGGVTEAVLRYAAEKVTGQTLYDTDFNDVRGESGLR 458
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
E G TL + G N + + +K+K YD IE+MACP GC+ G Q N +
Sbjct: 459 EVNVEVGGNTLHLAVVYGLANARVVCEKIKAGTCDYDLIEVMACPGGCVGGAGQPVNLDL 518
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
A+ K A L + ++N + Y +LG K +L+T Y +
Sbjct: 519 AARKRRAQGLYRSDKGRQLHKAQDNVFVNQCYAKFLGDVGGHKAHELLHTGYQS 572
>gi|435854933|ref|YP_007316252.1| hydrogenase, Fe-only [Halobacteroides halobius DSM 5150]
gi|433671344|gb|AGB42159.1| hydrogenase, Fe-only [Halobacteroides halobius DSM 5150]
Length = 575
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 193/415 (46%), Gaps = 45/415 (10%)
Query: 71 DCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
+C C C+T +T+ S ++V + + + N H +V+ A ++G
Sbjct: 190 NCANCGQCVTVCPVGALTEVSEVDKVWQALEDENQH----------VVVQTAPSIQATMG 239
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF--LSGGGPLFT 186
F + VV KL +LG D V A +++E +E L R P T
Sbjct: 240 EPFGMEPGTVVTGKLATALNQLGFDRVFSTDFAADLTIMEEGSELLARLEDKESNTPQIT 299
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + E ++ E +L +S KSP + L KT+ AE + IY V++MPC
Sbjct: 300 SCCPGWVKFCEHNYPE-LLDNLSTAKSPMSMFSPLAKTYYAETKDLEAEDIYTVSIMPCT 358
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R + ++ G +D D V+T EL ++ K+ + + E
Sbjct: 359 AKKFEKERGEL--QDSGTQDTDAVLTTRELARMI------------KEAGIKFAELEDTE 404
Query: 307 HRMLLVNGTGSG---GYAHNVLSHAIR----QLCPGESPVVEFKPLRN-PDIREATFTCG 358
+ ++ TG+G G V+ A+R +L E P ++ +R ++E G
Sbjct: 405 YDRMMGEATGAGTIFGTTGGVMEAALRTVYEKLTDEELPRLDLDEVRGLKGVKETAVEIG 464
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+ T++ +A+G N +L+ ++K YDFIE+MACP+GC+ GG Q + KE
Sbjct: 465 NDTVKVAVAHGLGNAADLLDQVKAGEANYDFIEVMACPAGCVGGGGQ----PYPASKEIK 520
Query: 419 LELETILCDLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
+ L ++ +S+ EN ++ LY+ +LG ++K H+L+T+Y KN
Sbjct: 521 AKRGQGLYNIDQSDKIRKSHENPEIKKLYEDFLGAPLSEKAHHLLHTNYQKRDKN 575
>gi|323142351|ref|ZP_08077183.1| putative ferredoxin hydrogenase HydA1 [Phascolarctobacterium
succinatutens YIT 12067]
gi|322413235|gb|EFY04122.1| putative ferredoxin hydrogenase HydA1 [Phascolarctobacterium
succinatutens YIT 12067]
Length = 574
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 200/427 (46%), Gaps = 40/427 (9%)
Query: 52 IQETNGRE--EKLKKVEISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKAS 108
+Q T R + V I +DC C CIT L + ++ V+ + N
Sbjct: 166 VQNTGARTTVDVAGNVSIEDSDCSLCGQCITHCPVGALKERNDVPKIYDVLADPN----- 220
Query: 109 SNENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLV 167
K V+ +A S F L E ++ K++G D V D A +++
Sbjct: 221 -----KVTVVQVAPAVRTSWAEAFNLPPELATEGRMVATLKKIGFDYVFDTCYAADVTIM 275
Query: 168 ELENEFLDRFL---SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
E +E L+ P+FTS CPGWV Y K+H F+ P +S KSPQQ+ G+L K+
Sbjct: 276 EEASELLEHLQKPQDHSWPMFTSCCPGWVSYVNKTHPYFV-PNLSTTKSPQQIFGALAKS 334
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ A+K G+ P I +++MPC KK EA A F G DVD V+T E LL E
Sbjct: 335 YFAQKKGLKPKEICSISIMPCVSKKREA--ALFSMRSSGTHDVDIVLTTREFIRLLRAEH 392
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPG-ES 337
+ +E+ P+D NP L TG+G G + V+ A+R + G E+
Sbjct: 393 INPAMLDEQ------PFD--NP----LGQSTGAGVIFGASGGVMEAALRTAYHVIEGKEA 440
Query: 338 PVVEFKPLRNPDIREAT-FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
P F +R + R+ FT G TLR C +G N L+ +LK ++ YDF+E+MACP
Sbjct: 441 PEDAFTDVRGTEGRKVREFTLGGATLRTCTVSGLGNAGKLLDELKAGKVHYDFVEVMACP 500
Query: 397 SGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGK 456
GC+ GG Q ++ +L TI + + N ++ LYK +L ++K +
Sbjct: 501 GGCVGGGGQPIHDGEERADVLGNKLYTIDSNRPLHQSHNNPDVQELYKDFLEKPLSEKAE 560
Query: 457 HMLNTSY 463
+L++ +
Sbjct: 561 QLLHSDH 567
>gi|282857806|ref|ZP_06267014.1| iron hydrogenase 1 ([Fe] hydrogenase) (Fe-only hydrogenase) (CpI)
[Pyramidobacter piscolens W5455]
gi|282584367|gb|EFB89727.1| iron hydrogenase 1 ([Fe] hydrogenase) (Fe-only hydrogenase) (CpI)
[Pyramidobacter piscolens W5455]
Length = 577
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 196/409 (47%), Gaps = 37/409 (9%)
Query: 70 TDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
DC C CIT L + ++V+ I ++ K +++ +A +
Sbjct: 186 ADCALCGQCITHCPVGALHERDDTQKVLDAI----------DDPEKIVLVQIAPAIRTAW 235
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG---PL 184
G +F + E V +L + +G D V D + +++E +EF++R P+
Sbjct: 236 GEEFGMKPGEATVTRLAAALRLVGFDYVFDTNFSADLTIMEEGSEFVERLKHRDREKFPM 295
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGW+ + KSH + +S KSPQQ+ G++ K+ A+ LGV PS I+ V++MP
Sbjct: 296 FTSCCPGWIRFV-KSHWPQFVGQLSSAKSPQQMFGAVAKSWYAQTLGVDPSRIFSVSIMP 354
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK E + G +DVD +T E+ L+ +LQ + + D D
Sbjct: 355 CLAKKAECALPGMDGAGAG-QDVDVALTTREVSRLI------RSLQIQPQDLADEELD-- 405
Query: 305 NPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREATFT 356
M L G+G+G G V+ A+R L G++P + FK +R D +EATF
Sbjct: 406 ----MPLGVGSGAGAIFGATGGVMEAALRSAFFLVTGKNPEPDAFKSVRGMDGWKEATFD 461
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
L+ + NG N L+ L R + YDF+E+MACP GC+ GG Q +++V +
Sbjct: 462 IAGTALKVAVVNGLGNADKLLAALDRGDVRYDFVEVMACPGGCVGGGGQPIHDRVEMAPQ 521
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
A L I + EN ++ Y+ +LG ++K +L+T+YH
Sbjct: 522 RAPTLYDIDRGMELRFSHENPSILACYQQFLGAPLSEKAHRLLHTTYHG 570
>gi|115525856|ref|YP_782767.1| hydrogenase, Fe-only [Rhodopseudomonas palustris BisA53]
gi|115519803|gb|ABJ07787.1| hydrogenases, Fe-only [Rhodopseudomonas palustris BisA53]
Length = 619
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 184/366 (50%), Gaps = 27/366 (7%)
Query: 117 VLSLAIQPVLSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
V+ A ++ G +F + + V ++ +++G+D+VLD A ++E E L
Sbjct: 249 VVQFAPAVRVAFGEEFGMPAGTNVEGQVIAACRKIGIDVVLDTNFAADVVIMEEGAELLS 308
Query: 176 RFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
R G P FTS CP W+ +AE ++ E ILP +S KSPQQV+ +L KT+L EKLG+
Sbjct: 309 RLKQGRRPTFTSCCPAWINFAEINYPE-ILPLLSSTKSPQQVLSTLAKTYLPEKLGIPAD 367
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
I +++MPC KK EA R ++ G + D V+T E LL E E +
Sbjct: 368 RIRVISIMPCIAKKDEAVRPQLSHD--GQPETDVVLTTREFARLLRREGIDLKTIERSN- 424
Query: 296 ILDWPWDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCP----GESPVVEFKPLRNPD- 349
D P+ M +G G+ G V+ A+R + E +E LR +
Sbjct: 425 -FDTPF-------MSGYSGAGAIFGTTGGVMEAALRTIYAIVNGRELERIELTQLRGFER 476
Query: 350 IREATFTCGDVT--LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
+REAT G ++ + +G + + L++ + + YDFIE+MACP GC++GG +R
Sbjct: 477 LREATVDLGGAVGEVKVAMVHGLGDTRALVEAVLAGKADYDFIEVMACPGGCVDGGGSLR 536
Query: 408 NEKVASPKETALELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
++K P AL+ + ++ ++ + N ++ LY+ L +++K H+L+T Y
Sbjct: 537 SKKAYLP--LALKRRETIYNVDRTAKVRQSHNNPQVQALYRELLEAPNSEKAHHLLHTHY 594
Query: 464 HNIPKN 469
+ K+
Sbjct: 595 EHRRKD 600
>gi|365842938|ref|ZP_09383904.1| putative ferredoxin hydrogenase HydA1 [Flavonifractor plautii ATCC
29863]
gi|364574198|gb|EHM51669.1| putative ferredoxin hydrogenase HydA1 [Flavonifractor plautii ATCC
29863]
Length = 583
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 216/467 (46%), Gaps = 57/467 (12%)
Query: 27 KPIPIEKPSGPRTGAK---------IRIQDDGAYIQETNGREEKLK-----KVEISLTDC 72
+P+ I+ PS R AK + + G +GR K + + TDC
Sbjct: 133 EPLRIDNPSIVRDPAKCVKCGRCVKVCAEVQGCAALTYSGRSAGFKVTTAFDLPMDQTDC 192
Query: 73 LACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
+ C C + ++ EV I++ + H +++ +A + LG +
Sbjct: 193 VLCGQCSLVCPVGAIVETDCTNEVTAAIQDPSKH----------VIVQVAPSVRVGLGDE 242
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSEC 189
F + VV K+ + LG D V D + +++E +E L R GG P+ TS
Sbjct: 243 FGMEAGAVVTGKMVTALRMLGFDKVFDTNFSADLTIMEEGSELLKRIREGGELPMITSCS 302
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGWV Y EK H E I ++S KSPQ + G++ KT+ A+K+G P + V++MPC KK
Sbjct: 303 PGWVTYLEKHHPELI-DHLSTAKSPQAMFGAVAKTYYAQKMGWDPHDVVSVSVMPCTAKK 361
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWPWDEHNPHR 308
EASR + + GY+DVD V+T EL L+ L + L E + D P
Sbjct: 362 YEASRPELGRD--GYQDVDYVLTTRELAKLIRYVGLDLSVLPESE---FDSPL------- 409
Query: 309 MLLVNGTGSG-----GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNP--DIREATFTC 357
GTGSG G V+ A+R +L G++ P +EF +R I+EAT
Sbjct: 410 -----GTGSGAGAIFGATGGVMEAALRTAYELYTGKTLPRLEFDAVRGDINAIKEATIDL 464
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
L+ +ANG +N + LI++++R Y FIEIMACP GC+ GG Q A
Sbjct: 465 DGTPLKVAVANGLKNAEELIRRVERGEADYIFIEIMACPGGCIGGGGQPIGTNNAVRDAR 524
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
L I L + EN ++ +Y+ + G + + +L+T YH
Sbjct: 525 IQALYEIDRSLPLRKSHENPEIKTIYEEFFGAPLSQRSHELLHTHYH 571
>gi|358062271|ref|ZP_09148917.1| hypothetical protein HMPREF9473_00979 [Clostridium hathewayi
WAL-18680]
gi|356699400|gb|EHI60914.1| hypothetical protein HMPREF9473_00979 [Clostridium hathewayi
WAL-18680]
Length = 582
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 189/409 (46%), Gaps = 27/409 (6%)
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAI 122
K+ + T C++C CI + + ++ + ++V+ I + + H +++ A
Sbjct: 184 KMGLGETSCVSCGQCIAVCPTGALREKDYIDDVLAAIADPDKH----------VIVQTAP 233
Query: 123 QPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
LG +F V K+ +R+G D V D + +++E +EF++R GG
Sbjct: 234 AVRAGLGEEFGYPIGTNVEGKMAAALRRIGFDKVFDTNFSADLTIMEEAHEFIERVQHGG 293
Query: 182 G-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+ TS PGW+ Y E + + +S KSPQQ+ G++ K++ AEK G+ P I V
Sbjct: 294 VLPMITSCSPGWIKYCEHYFPD-MTENLSSCKSPQQMFGAIAKSYYAEKQGLKPKDIVSV 352
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
++MPC KK E R D G DVD +T EL ++ E D D P
Sbjct: 353 SIMPCTAKKFEIGRND--QAANGVPDVDYSLTTRELARMIKK--LGIRFNELPDEEFDAP 408
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
++ +GG L A+ L E ++F +R + I+EAT+
Sbjct: 409 LGLGTGAAVIF---GATGGVMEAALRTAVETLTGEELAALDFTDVRGMEGIKEATYPVAG 465
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
+ ++ +A+G N + L+ K+K Y FIEIM CP GC+NGG Q +
Sbjct: 466 MDVKVAVASGLGNAKKLLDKVKSGEADYHFIEIMGCPGGCVNGGGQPQQPGPVRNTVDVR 525
Query: 420 ELET-ILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L +L D K+ P EN ++ LY +LG ++ H+L+T+Y
Sbjct: 526 ALRAQVLYDSDKNNPIRKSHENPAIKELYDTYLGRPGSEMAHHLLHTTY 574
>gi|125972951|ref|YP_001036861.1| hydrogenase, Fe-only [Clostridium thermocellum ATCC 27405]
gi|256005707|ref|ZP_05430663.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 2360]
gi|385779133|ref|YP_005688298.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 1313]
gi|419722662|ref|ZP_14249801.1| hydrogenase, Fe-only [Clostridium thermocellum AD2]
gi|419725254|ref|ZP_14252305.1| hydrogenase, Fe-only [Clostridium thermocellum YS]
gi|125713176|gb|ABN51668.1| hydrogenase, Fe-only [Clostridium thermocellum ATCC 27405]
gi|255990338|gb|EEU00464.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 2360]
gi|316940813|gb|ADU74847.1| hydrogenase, Fe-only [Clostridium thermocellum DSM 1313]
gi|380771340|gb|EIC05209.1| hydrogenase, Fe-only [Clostridium thermocellum YS]
gi|380781322|gb|EIC10981.1| hydrogenase, Fe-only [Clostridium thermocellum AD2]
Length = 566
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 187/390 (47%), Gaps = 37/390 (9%)
Query: 70 TDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL-- 126
++C+ C C + ++ + ++V K I + N +S+ I P +
Sbjct: 189 SNCVGCGQCALACPTGAIVVKDDTQKVWKEIYDKNTR------------VSVQIAPAVRV 236
Query: 127 SLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--P 183
+LG + L+ E + K+ +R+G D + D +++E E L R G P
Sbjct: 237 ALGKELGLNDGENAIGKIVAALRRMGFDDIFDTSTGADLTVLEESAELLRRIREGKNDMP 296
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
LFTS CP WV Y EK + E +LP++S +SP Q+ S+IK E+ + HV +M
Sbjct: 297 LFTSCCPAWVNYCEKFYPE-LLPHVSTCRSPMQMFASIIK----EEYSTSSKRLVHVAVM 351
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA+R +F G +VD V+T EL V + E + E + I D P+
Sbjct: 352 PCTAKKFEAARKEFKVN--GVPNVDYVLTTQEL-VRMIKESGIVFSELEPEAI-DMPFGT 407
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTL 362
+ ++ SGG VL + P + + +R + ++EA+ GD L
Sbjct: 408 YTGAGVIF---GVSGGVTEAVLRRVVSDKSPTSFRSLAYTGVRGMNGVKEASVMYGDRKL 464
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNEKVASPKETALE 420
+ + +G +N +LI+++K YD +E+MACP GC+NGG Q +++E+ + L
Sbjct: 465 KVAVVSGLKNAGDLIERIKAGE-HYDLVEVMACPGGCINGGGQPFVQSEE-REKRGKGLY 522
Query: 421 LETILCDLAKSEPRENATLEHLYKAWLGGK 450
LC++ SE EN + LYK L G+
Sbjct: 523 SADKLCNIKSSE--ENPLMMTLYKGILKGR 550
>gi|50344697|dbj|BAD29951.1| hydrogenase [Clostridium paraputrificum]
Length = 582
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 182/413 (44%), Gaps = 47/413 (11%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C C+ + +++++H + +K E+ K +++++A ++G
Sbjct: 188 TNCLLCGQCVAACPVGALSEKTHIDRVKEALEDPE---------KHVIVAMAPAVRTAMG 238
Query: 130 AKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + + V KL + LG D + D+ +++E E L+R G P+FTS
Sbjct: 239 ELFNMGYGVDVTGKLYTALRELGFDRIFDINFGADMTIMEEATELLERIEKKGPFPMFTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV E + E +L +S KSPQQ+ G+ KT+ G+ P I+ VT+MPC
Sbjct: 299 CCPGWVRQVENYYPE-LLENLSSAKSPQQIFGTASKTYYPHIAGIDPEKIFTVTIMPCTA 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R D E G R++D V+T EL ++E+K E +P
Sbjct: 358 KKFEADREDM--ELDGLRNIDAVLTTRELAKF---------IKEKKIAFAKLEDSEADP- 405
Query: 308 RMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IREATF 355
+ TG+G G V+ AIR VE K L N D I+EA+
Sbjct: 406 --AMGEYTGAGVIFGATGGVMEAAIRTA----KEFVEKKELENLDYTEVRGLNGIKEASV 459
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-----IRNEK 410
G + NG N+ I+ + Y FIE+M CP GC+NGG Q + EK
Sbjct: 460 NIGGEDYNVAVINGSANLFEFIESGRMNSKEYHFIEVMTCPGGCVNGGGQPHVNNLEREK 519
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ A L K + EN L +Y ++G K +L+ Y
Sbjct: 520 IDIKSVRASVLYNQDKSAKKRKSHENVALMKMYDEYMGQPGRGKAHELLHYKY 572
>gi|334341940|ref|YP_004546920.1| hydrogenase Fe-only [Desulfotomaculum ruminis DSM 2154]
gi|334093294|gb|AEG61634.1| hydrogenase, Fe-only [Desulfotomaculum ruminis DSM 2154]
Length = 519
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 200/424 (47%), Gaps = 50/424 (11%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + IT++ ++V+K + + H +V+ A + LG
Sbjct: 112 CVNCGQCTLWCPTAAITERDDIDKVIKALENKDMH----------VVVQTAPATRVGLGE 161
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLFT 186
+F ++ V K K+LG D V D + ++ E E + R + P FT
Sbjct: 162 EFGMAPGTFVEGKQVAALKKLGFDAVFDTNFSADLTIFEEGTELIKRVTGEIKEPLPQFT 221
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV + E + + +L ++S KSPQQ++G++IKT+ A++ G++P I+ V++MPC
Sbjct: 222 SCSPGWVKFCEYFYPD-LLEHMSTCKSPQQMLGAMIKTYYAKEKGINPEKIFSVSIMPCT 280
Query: 247 DKKLEASRADF-----YNEELGYRDVDCVITAVELEVLLA-NELATTTLQEEKDGILDWP 300
KK EA+R + Y + RDVD V+T EL L+ + TL E K
Sbjct: 281 AKKFEAARPEMNSAGEYAGKPNLRDVDVVLTTRELARLIKMKNIDLNTLPEAK------- 333
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ----LCPGESP--VVEFKPLRN-PDI 350
+ L+ TG+G G V+ AIR + E P ++ P+R P I
Sbjct: 334 ------YDSLMGESTGAGLIFGATGGVMEAAIRSAYFLITKQEPPEALLNLTPVRGLPGI 387
Query: 351 REATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
+EA V T+R +A+G N + +++ +++ PY FIE M CP GC++GG Q R
Sbjct: 388 KEAGVDIPGVGTVRVAVAHGLSNARPILEAVRKGESPYHFIEFMCCPGGCISGGGQPRTS 447
Query: 410 KVASPKETALELETILCD----LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
S + + ++ AK + EN + LY+ +L ++ +L+T Y +
Sbjct: 448 LPPSDEVRKARIASLYNADAHVYAKRKSHENKEVLALYEKFLEHPNSHLAHELLHTHYED 507
Query: 466 IPKN 469
K+
Sbjct: 508 RSKH 511
>gi|268323917|emb|CBH37505.1| putative Fe-only hydrogenase [uncultured archaeon]
Length = 569
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 185/366 (50%), Gaps = 23/366 (6%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHCFS 165
A+ ++ K +V+ A +LG +F L+ +V+ K+ KR G D V D +
Sbjct: 215 AAIDDPEKHVVVQEAPAIRAALGEEFGLAPGTLVSGKMHAALKRFGFDAVFDTNFTADLT 274
Query: 166 LVELENEFLDRFLSGGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK 223
++E +E + R ++GGG P TS PGW+ +AE + + +L +IS KSPQQ+ GSL K
Sbjct: 275 IMEEGSELVKR-INGGGVLPQITSCSPGWIKFAEHFYPD-LLDHISTCKSPQQMFGSLAK 332
Query: 224 THLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE 283
T+ AEK + P I V++MPC KK EASR + + GY+DVD V+T EL +
Sbjct: 333 TYYAEKADMDPKKIVSVSVMPCTAKKFEASRPEMSDS--GYQDVDYVLTTRELARM---- 386
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESP 338
++E P +E P M + G G +GG L A + + E
Sbjct: 387 -----IKEAGIDFASLPDEEAEP-LMGMYTGAGTIFGATGGVMEAALRTAYKLVTGKELE 440
Query: 339 VVEFKPLRN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPS 397
++ P+R I+EAT + ++ +A+G N + L+ ++ + PY FIEIMACP
Sbjct: 441 NLDITPVRGMAGIKEATVDVDGLEVKVAVAHGLGNARKLLDTVRVGKSPYHFIEIMACPG 500
Query: 398 GCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKH 457
GC+ GG Q + +A L L + EN +++ LY+ +LG +K H
Sbjct: 501 GCVGGGGQPISFDMALRSTRGQTLYNEDAKLPYRKSHENPSIKRLYEEYLGEPLGEKSHH 560
Query: 458 MLNTSY 463
+L+T Y
Sbjct: 561 LLHTRY 566
>gi|346315724|ref|ZP_08857236.1| hypothetical protein HMPREF9022_02893 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345904086|gb|EGX73835.1| hypothetical protein HMPREF9022_02893 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 577
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 198/414 (47%), Gaps = 46/414 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I +C C CIT + V ++ A+ N+ K ++ +A
Sbjct: 183 IEEAECSLCGQCITHCPV---------NALHVREDSERAFAAFNDPDKITIVQIAPAVRA 233
Query: 127 SLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--- 182
+ G L E+ + KL F+R+G D V D A +++E +EFL+R
Sbjct: 234 AWGESLGLRREEATIEKLGDAFRRMGADYVFDTDFAADLTIMEEASEFLERLHHNKEQEM 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CPGWV + + + + + ++S KSP Q+ G++ KT AEKLGV PS IY++++
Sbjct: 294 PMFTSCCPGWVRFLKSQYPDMV-SHLSTSKSPHQMFGAVTKTWFAEKLGVDPSSIYNISV 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPW 301
MPC KK E + GYRDVD V+T E+ ++ A + LQ D LD P
Sbjct: 353 MPCVAKKHEIDIPVMNDS--GYRDVDVVLTIREVVRMIHAEHIDVGYLQ---DHPLDDP- 406
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREA 353
L +G+G G V+ A+R GE+ + F +R D +E+
Sbjct: 407 ---------LGTASGAGVIFGATGGVMEAALRSAYYFVTGENADADAFANVRGMDGWKES 457
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS 413
TF + +R I +G N + LI+ ++RK + YDFIE+MACP GC GG Q +
Sbjct: 458 TFEIQGIPVRCAIVSGLGNTRRLIEAMRRKEVAYDFIEVMACPGGCSGGGGQ----PIHD 513
Query: 414 PKETALELETILCDLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+E A E L L ++ EN ++ LY +LG ++ + +L+T +
Sbjct: 514 GEELAAERADTLYHLDRNAKLRYSHENPSIHALYDEYLGKPLSELAEKLLHTDH 567
>gi|428671559|gb|EKX72477.1| Fe hydrogenase large subunit, C-terminal domain containing protein
[Babesia equi]
Length = 631
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 213/522 (40%), Gaps = 137/522 (26%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
+S ++L L+D++ PS+ECI +P++K + R + GA G +++ +V
Sbjct: 2 YSNAVKLGGLNDYLNPSEECI--LPVKKNTSSYEVKLNRDEQKGA--NRHPGSQKRDSRV 57
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+ L+DCL+CSGC+TS+E +L+ V++ ++ N + V+S++ Q V
Sbjct: 58 TVGLSDCLSCSGCLTSSEEILMKNDHFVTVIEKLK-----------NAEHGVVSISPQTV 106
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG----- 180
++ A + L KL F+ LG + + + ++ E + EF+++FLS
Sbjct: 107 YAIAACYGLDPVIAFGKLSHLFRILGAKNIFSMNVGEMIAVHESKVEFVNKFLSSCPVNL 166
Query: 181 ------GG-------------------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
G P+ ++ CPGW YAEK + IS V S Q
Sbjct: 167 QEDYRNGNLLPHDYAQNFGDLKNDRVLPIISNHCPGWTLYAEKMLDMHYIDRISAVSSSQ 226
Query: 216 QVMGSLIKT-----------------HLAEKLGVHP---------------------SHI 237
+ G +IK L + G H +I
Sbjct: 227 LIQGLVIKALAHTVQFCKILGDTAELMLTDFPGFHRMDKGELSILDTKTMMETEWKYKNI 286
Query: 238 YHVTLMPCYDKKLEASRADFYN----------EELGYRD--------VDCVITAVELEVL 279
YHV++ PCYDK+LEA R + + E G D VD V++ +++ +
Sbjct: 287 YHVSIAPCYDKRLEALRPQYEHDFERLLRKGRESTGEGDGARHTIKLVDDVLSTSDVQAI 346
Query: 280 L--------------------------------ANELATTTLQEEKDGILDWPWDEHNPH 307
L + L+ +L+ KD L H
Sbjct: 347 LNHLGLNFEALSEAPLDEISDGHLKALLKIFQESGTLSEQSLEFSKDANLSILASRHGKI 406
Query: 308 RMLLVNGT--GSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVT-LRF 364
+ + SGG+A + A L VEF NPD +E GD+ LRF
Sbjct: 407 NLYRPSKIYCQSGGFAEEIFKFAAENLFGRRVDDVEFTSTINPDFKECILRSGDIILLRF 466
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI 406
IA G+RN+QN+++ LK +IE+M+CP GC NG Q+
Sbjct: 467 IIAYGYRNVQNVVRMLK-DSTNISYIELMSCPGGCFNGPGQV 507
>gi|291549870|emb|CBL26132.1| hydrogenases, Fe-only [Ruminococcus torques L2-14]
Length = 578
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 154/284 (54%), Gaps = 31/284 (10%)
Query: 129 GAKFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG---GPL 184
G LS E+ + K+ K++GVD V D + +++E NEFL RF G P+
Sbjct: 236 GEALGLSREEATSGKIMDALKKIGVDYVFDTSFSADLTIMEEGNEFLQRFTKGELKLRPM 295
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGW+ + KS ++P +S KSPQQ+ G+++KT+ A+ +GV P IY V++MP
Sbjct: 296 FTSCCPGWIRFI-KSQYPHLVPQLSTAKSPQQMFGAIMKTYFAQSIGVAPEDIYTVSVMP 354
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWPWDE 303
C KK E + FY E G+ D+D V+T EL ++ A + L++ E
Sbjct: 355 CVAKKGERNMELFYGEYAGH-DIDTVLTTRELTRMIRAAHIDPKILKDR----------E 403
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNP----DIRE 352
+P L+ +G+G G V+ A+R L G +P + FK +R+P D+ E
Sbjct: 404 CDP---LMKEWSGAGVIFGATGGVMEAALRSAHYLVTGRNPDPDAFKIVRSPSFETDVVE 460
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
A GD T+R + +G N++ L++ ++ + YDF+E+MACP
Sbjct: 461 AEVQIGDATIRAAVVSGLGNVRKLLEAIEHGEVHYDFVEVMACP 504
>gi|219854097|ref|YP_002471219.1| hypothetical protein CKR_0754 [Clostridium kluyveri NBRC 12016]
gi|219567821|dbj|BAH05805.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 466
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 191/392 (48%), Gaps = 39/392 (9%)
Query: 104 AHKASSNENTKTIVLSLAIQPVL--------SLGAKFALSHEQVV-AKLCGFFKRLGVDL 154
A+ S +N K I+ + + ++ ++G +F L + K+ +++G D
Sbjct: 92 AYSTSRIKNVKEILRNTDVFKIVQCAPAVRVAIGEEFGLPFGTLSEGKMAVVLRKIGFDR 151
Query: 155 VLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
V D +++E +E LDR GG P+FTS CP WV Y E+++ E +LP++S KS
Sbjct: 152 VYDTNFGADLTIMEEGSELLDRITKGGTLPMFTSCCPAWVKYMEQTYPE-LLPHLSSCKS 210
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITA 273
PQQ+ G++ K++ AE V+P+ IY+V +MPC K+ E+ R + E YR VD VIT
Sbjct: 211 PQQMAGAIFKSYGAEINKVNPAKIYNVAVMPCTCKEFESEREEMSCNE--YRSVDIVITT 268
Query: 274 VELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR 330
EL L+ KD +D+ + +L TG+G G V+ A+R
Sbjct: 269 RELAHLI------------KDADIDFNTLSDDKFDDVLGMYTGAGTIFGSTGGVMEAALR 316
Query: 331 ---QLCPGES-PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRL 385
+L +S P +E +R R A GD L+ I +G ++++ ++ +K+ +
Sbjct: 317 TGYELYTKKSIPKIELTDIRGGQGFRTAEVELGDFKLKVGIVSGLKHVKKVLDMIKKGKC 376
Query: 386 PYDFIEIMACPSGCLNGGAQ----IRNEKVASPKETALELETILCDLAKSEPRENATLEH 441
FIE+M CP GC++GG Q ++K + L L + EN ++
Sbjct: 377 DMHFIEVMTCPEGCVSGGGQPKIIFESDKNIAYDARKRGLYNHDSSLPYRKSHENPGIQK 436
Query: 442 LYKAWLGGKSTDKGKHMLNTSYHNIPKNNIAL 473
LY +LG K +L+T Y + + NI L
Sbjct: 437 LYSEFLGEPLGYKSHELLHTKYKS--RKNITL 466
>gi|153953475|ref|YP_001394240.1| Fe-Fe hydrogenase 2 [Clostridium kluyveri DSM 555]
gi|146346356|gb|EDK32892.1| Predicted Fe-Fe hydrogenase 2 [Clostridium kluyveri DSM 555]
Length = 457
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 191/392 (48%), Gaps = 39/392 (9%)
Query: 104 AHKASSNENTKTIVLSLAIQPVL--------SLGAKFALSHEQVV-AKLCGFFKRLGVDL 154
A+ S +N K I+ + + ++ ++G +F L + K+ +++G D
Sbjct: 83 AYSTSRIKNVKEILRNTDVFKIVQCAPAVRVAIGEEFGLPFGTLSEGKMAVVLRKIGFDR 142
Query: 155 VLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKS 213
V D +++E +E LDR GG P+FTS CP WV Y E+++ E +LP++S KS
Sbjct: 143 VYDTNFGADLTIMEEGSELLDRITKGGTLPMFTSCCPAWVKYMEQTYPE-LLPHLSSCKS 201
Query: 214 PQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITA 273
PQQ+ G++ K++ AE V+P+ IY+V +MPC K+ E+ R + E YR VD VIT
Sbjct: 202 PQQMAGAIFKSYGAEINKVNPAKIYNVAVMPCTCKEFESEREEMSCNE--YRSVDIVITT 259
Query: 274 VELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR 330
EL L+ KD +D+ + +L TG+G G V+ A+R
Sbjct: 260 RELAHLI------------KDADIDFNTLSDDKFDDVLGMYTGAGTIFGSTGGVMEAALR 307
Query: 331 ---QLCPGES-PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRL 385
+L +S P +E +R R A GD L+ I +G ++++ ++ +K+ +
Sbjct: 308 TGYELYTKKSIPKIELTDIRGGQGFRTAEVELGDFKLKVGIVSGLKHVKKVLDMIKKGKC 367
Query: 386 PYDFIEIMACPSGCLNGGAQ----IRNEKVASPKETALELETILCDLAKSEPRENATLEH 441
FIE+M CP GC++GG Q ++K + L L + EN ++
Sbjct: 368 DMHFIEVMTCPEGCVSGGGQPKIIFESDKNIAYDARKRGLYNHDSSLPYRKSHENPGIQK 427
Query: 442 LYKAWLGGKSTDKGKHMLNTSYHNIPKNNIAL 473
LY +LG K +L+T Y + + NI L
Sbjct: 428 LYSEFLGEPLGYKSHELLHTKYKS--RKNITL 457
>gi|440785157|ref|ZP_20962107.1| hydrogenase-1 [Clostridium pasteurianum DSM 525]
gi|440218529|gb|ELP57749.1| hydrogenase-1 [Clostridium pasteurianum DSM 525]
Length = 505
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 185/402 (46%), Gaps = 25/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C CI + ++++SH + +K NA A K +++++A S+G
Sbjct: 119 TNCLLCGQCIIACPVAALSEKSHMDRVK-----NALNAPE----KHVIVAMAPSVRASIG 169
Query: 130 AKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + V K+ ++LG D + D+ +++E E + R + G P+FTS
Sbjct: 170 ELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRIENNGPFPMFTS 229
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV AE + E +L +S KSPQQ+ G+ KT+ G+ P +++ VT+MPC
Sbjct: 230 CCPGWVRQAENYYPE-LLNNLSSAKSPQQIFGTASKTYYPSISGLDPKNVFTVTVMPCTS 288
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R E+ G RD+D VIT EL ++ + A + +D D E++
Sbjct: 289 KKFEADRPQM--EKDGLRDIDAVITTRELAKMIKD--AKIPFAKLEDSEADPAMGEYSGA 344
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
+ +GG L A E +E+K +R + I+EA + +
Sbjct: 345 GAIF---GATGGVMEAALRSAKDFAENAELEDIEYKQVRGLNGIKEAEVEINNNKYNVAV 401
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN-----EKVASPKETALEL 421
NG N+ ++ Y FIE+MAC GC+NGG Q EKV K A L
Sbjct: 402 INGASNLFKFMKSGMINEKQYHFIEVMACHGGCVNGGGQPHVNPKDLEKVDIKKVRASVL 461
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L+K + EN L +Y+ + G + +L+ Y
Sbjct: 462 YNQDEHLSKRKSHENTALVKMYQNYFGKPGEGRAHEILHFKY 503
>gi|320353705|ref|YP_004195044.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Desulfobulbus propionicus DSM 2032]
gi|320122207|gb|ADW17753.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Desulfobulbus propionicus DSM 2032]
Length = 683
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 198/412 (48%), Gaps = 37/412 (8%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
++ T+C+ C C + + + S + V K I + N +V +A
Sbjct: 187 DLGTTECVNCGQCASVCPTGALAPASEIDAVWKAIHDPNT----------VVVAQIAPAV 236
Query: 125 VLSLGAKFALSHE-----QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
+++G +F L + QVVA + KR+G ++V D ++VE EF+ R +
Sbjct: 237 RVAIGEQFGLEYGLNTTGQVVAAM----KRMGFNIVYDTSFTADLTVVEEAGEFMARKTN 292
Query: 180 GGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
G PLFTS CPGWV +AE+ + +L +S +SPQQ+MGS++K L +LG +
Sbjct: 293 GERLPLFTSCCPGWVKFAEQYFPQ-LLGNLSSCRSPQQMMGSMVKHTLPAQLGRERKDVV 351
Query: 239 HVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILD 298
V++MPC KK EA R +F G DVD V+T EL ++ E + +L + D
Sbjct: 352 MVSIMPCTAKKFEAKRPEFKTG--GSPDVDFVLTTQELARMI--EESGLSLNKLNPASFD 407
Query: 299 WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPD-IREATFT 356
P ++ N SGG VL +A+ ++ G++PV EF+ +R + +R
Sbjct: 408 MPMGFKTGAGVIFGN---SGGVTEAVLRYAVGKI-TGQNPVDPEFEEIRGEESLRVIRTE 463
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G + L+ I +G + ++ ++ L D +E+MACP GC+ G Q +A +
Sbjct: 464 VGGLELKLAIVHGLGKAREVMHQILDGSLIVDLVEVMACPGGCIGGAGQPVGRDIAERRR 523
Query: 417 TALEL---ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
E L DL S+ EN + Y+ +LG + + +L+T YH+
Sbjct: 524 ARTEWLYNTDRLLDLHCSQ--ENHFVNECYQKYLGEPGSRESHRLLHTHYHH 573
>gi|392423711|ref|YP_006464705.1| hydrogenase, Fe-only [Desulfosporosinus acidiphilus SJ4]
gi|391353674|gb|AFM39373.1| hydrogenase, Fe-only [Desulfosporosinus acidiphilus SJ4]
Length = 580
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 207/436 (47%), Gaps = 29/436 (6%)
Query: 45 IQDDGAYIQETNGREEKLKK---VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE 101
+Q G Y G E +K + +S T C C C+ + +T+ ++V KV +
Sbjct: 165 VQTVGVYSAMGRGFETVIKTAFDLPLSQTACTFCGQCLAVCPTGALTEV--DQVDKVWK- 221
Query: 102 NNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGI 160
+ N+ + +V+ A ++LG +F L VV K+ +RLG D V D
Sbjct: 222 ------ALNDPNQFVVVQTAPAVRVALGEEFGLESGTVVTGKMVASLRRLGFDRVFDTDF 275
Query: 161 AHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMG 219
A +++E +E + R GG PL TS CP WV + E + +L S KSP Q++G
Sbjct: 276 AADLTIMEEASELVHRIKHGGRLPLLTSCCPAWVKFFEHQFPD-LLDIPSTCKSPHQMLG 334
Query: 220 SLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVL 279
SL K++ A+ LG+ P I V++MPC KK EA+R + + DVD VIT EL +
Sbjct: 335 SLTKSYYAKTLGIDPKSITVVSVMPCVAKKYEAARPEL-AQSADTADVDIVITTRELARM 393
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV 339
+ A+ KD D+P E ++ GT +GG L A L
Sbjct: 394 IRE--ASIHFDHLKDQEFDYPLGESTGAAVIF--GT-TGGVLEAALRTAYEMLTGETLEK 448
Query: 340 VEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSG 398
VEF+ LR + I+EA R + +G N +++++K++ YD IEIMACP G
Sbjct: 449 VEFEALRGMNGIKEAVIPIAGHDYRIAVIHGLGNARSVLEKIRAGESTYDVIEIMACPGG 508
Query: 399 CLNGGAQIR---NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKG 455
C+ GG Q N ++ + A+ E L KS EN + LYK +LG ++
Sbjct: 509 CIGGGGQPYHHGNMEILKHRAAAIYREDRAKPLRKSH--ENLAIVALYKDYLGDPYGERA 566
Query: 456 KHMLNTSYHNIPKNNI 471
+L+T+Y P+ I
Sbjct: 567 HQLLHTTY--TPRRKI 580
>gi|440785158|ref|ZP_20962108.1| Hydrogene dehydrogenase [Clostridium pasteurianum DSM 525]
gi|130069|sp|P29166.1|PHF1_CLOPA RecName: Full=Iron hydrogenase 1; AltName: Full=CpI; AltName:
Full=Fe-only hydrogenase; AltName: Full=[Fe] hydrogenase
gi|4139441|pdb|1FEH|A Chain A, Fe-Only Hydrogenase From Clostridium Pasteurianum
gi|6730137|pdb|1C4A|A Chain A, Binding Of Exogenously Added Carbon Monoxide At The Active
Site Of The Fe-Only Hydrogenase (Cpi) From Clostridium
Pasteurianum
gi|6730138|pdb|1C4C|A Chain A, Binding Of Exogenously Added Carbon Monoxide At The Active
Site Of The Fe-Only Hydrogenase (Cpi) From Clostridium
Pasteurianum
gi|185177961|pdb|3C8Y|A Chain A, 1.39 Angstrom Crystal Structure Of Fe-Only Hydrogenase
gi|144836|gb|AAA23248.1| hydrogenase I [Clostridium pasteurianum]
gi|440218530|gb|ELP57750.1| Hydrogene dehydrogenase [Clostridium pasteurianum DSM 525]
Length = 574
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 185/402 (46%), Gaps = 25/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C CI + ++++SH + +K NA A K +++++A S+G
Sbjct: 188 TNCLLCGQCIIACPVAALSEKSHMDRVK-----NALNAPE----KHVIVAMAPSVRASIG 238
Query: 130 AKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + V K+ ++LG D + D+ +++E E + R + G P+FTS
Sbjct: 239 ELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRIENNGPFPMFTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV AE + E +L +S KSPQQ+ G+ KT+ G+ P +++ VT+MPC
Sbjct: 299 CCPGWVRQAENYYPE-LLNNLSSAKSPQQIFGTASKTYYPSISGLDPKNVFTVTVMPCTS 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R E+ G RD+D VIT EL ++ + A + +D D E++
Sbjct: 358 KKFEADRPQM--EKDGLRDIDAVITTRELAKMIKD--AKIPFAKLEDSEADPAMGEYSGA 413
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
+ +GG L A E +E+K +R + I+EA + +
Sbjct: 414 GAIF---GATGGVMEAALRSAKDFAENAELEDIEYKQVRGLNGIKEAEVEINNNKYNVAV 470
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN-----EKVASPKETALEL 421
NG N+ ++ Y FIE+MAC GC+NGG Q EKV K A L
Sbjct: 471 INGASNLFKFMKSGMINEKQYHFIEVMACHGGCVNGGGQPHVNPKDLEKVDIKKVRASVL 530
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L+K + EN L +Y+ + G + +L+ Y
Sbjct: 531 YNQDEHLSKRKSHENTALVKMYQNYFGKPGEGRAHEILHFKY 572
>gi|309777308|ref|ZP_07672270.1| Fe-hydrogenase [Erysipelotrichaceae bacterium 3_1_53]
gi|308914988|gb|EFP60766.1| Fe-hydrogenase [Erysipelotrichaceae bacterium 3_1_53]
Length = 576
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 207/418 (49%), Gaps = 54/418 (12%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKV-IRENN--AHKASSNENTKTIVLSLAIQ 123
I DC C CIT H V + +RE++ A A ++ +T TIV I
Sbjct: 183 IEEADCSLCGQCIT-----------HCPVNALHVREDSERAFDALNDPDTITIV---QIA 228
Query: 124 PVL--SLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
P + + G LS E + KL F+R+G D V D A +++E +EFL R
Sbjct: 229 PAVRAAWGESLGLSRAEATIEKLGDAFRRMGADYVFDTDFAADLTIMEEASEFLSRLQHT 288
Query: 181 GG---PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P+FTS CPGWV + + + + + +S KSP Q+ G++ KT A+KLGV S I
Sbjct: 289 DEHKLPMFTSCCPGWVRFLKSQYPDMV-SQLSTSKSPHQMFGAVTKTWFADKLGVDASKI 347
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGI 296
Y++++MPC KK E ++ GYRDVD V+T E + ++ A + + LQ
Sbjct: 348 YNISVMPCVAKKHEIDIPVM--QDSGYRDVDVVLTTREVIRMIHAEHIDVSYLQ------ 399
Query: 297 LDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD 349
D P D+ L +G+G G V+ A+R GE+ + F +R D
Sbjct: 400 -DIPLDDP------LGTASGAGVIFGATGGVMEAALRSAYYFVIGENANPDAFTAVRGMD 452
Query: 350 -IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
+EA F +T+R I +G N + LI+ ++R + YDF+E+MACP GC GG Q +
Sbjct: 453 GWKEAAFDIQGITVRCAIVSGLGNTRRLIEAMRRGEVSYDFVEVMACPGGCSGGGGQPIH 512
Query: 409 EKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ A+ ET+ C ++E R EN ++ LY+ +LG ++ + +L+T +
Sbjct: 513 D---GEDLAAIRAETLYCLDQQAELRYSHENPSIHTLYEEYLGEPLSELAEKLLHTDH 567
>gi|373489125|ref|ZP_09579788.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Holophaga
foetida DSM 6591]
gi|372004601|gb|EHP05240.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Holophaga
foetida DSM 6591]
Length = 669
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 189/404 (46%), Gaps = 26/404 (6%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+ DC+ C C IT +S E+V V+ + +KT+++ +A
Sbjct: 186 IAEVDCVNCGQCAAICPVGAITVKSDIEKVFDVL----------GDPSKTVIVQVAPAVR 235
Query: 126 LSLGAKFALSHEQ--VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
++ F L ++ + ++ +RLG V D ++ E EF++R GG
Sbjct: 236 SAMAEAFGLPNDTFTTMGRIVTALRRLGFKKVYDTSFTADLTIWEEATEFINRKQKGGKL 295
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CP WV AE E IL IS +SPQ + GSL K L +LG+ + V++
Sbjct: 296 PLFTSCCPAWVKLAEHDLPE-ILDNISSCRSPQAMFGSLAKEILPGELGIQREDLVVVSV 354
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK EA+R +F + G D D VIT EL ++ + A E G LD P+
Sbjct: 355 MPCTAKKFEATRPEFAVD--GNPDTDLVITTQELARMIQD--AGLLFGELPVGSLDMPFG 410
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVV-EFKPLRNPDIREATFTCGDVT 361
++ N SGG + V+ + L E+PVV E + +N I E G
Sbjct: 411 FKTGAGVIFAN---SGGVSEAVVRYVAGHLGE-ENPVVQELRSDKNRRILEVPTKLG--A 464
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
+R + G Q L+++++ + DF+E+MACP GC+ G Q A+ ++ +
Sbjct: 465 IRMGVVYGLAEAQRLVKEIQAGQSDVDFVEVMACPGGCIGGAGQPVTHSAATREQRTQAI 524
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ L P+EN ++ +Y L ++ + H+L+T Y +
Sbjct: 525 RRVDAALDLHCPQENHYVKEMYSERLESPNSHQAHHLLHTHYQS 568
>gi|373486339|ref|ZP_09577014.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Holophaga
foetida DSM 6591]
gi|372011914|gb|EHP12500.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Holophaga
foetida DSM 6591]
Length = 587
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 174/403 (43%), Gaps = 27/403 (6%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C+ + +Q H E V K + H +V+ +A +LG
Sbjct: 194 CIQCGQCVAVCPTAAFLEQDHTERVWKALAAEKKH----------VVVQVAPAIRATLGE 243
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
F L V KL +RLG D V D +++E EFL R G PL TS
Sbjct: 244 MFGLPVGTPVTGKLVTALRRLGFDEVFDTNFGADLTIMEEATEFLSRVSKGENLPLLTSC 303
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGWV + EK + E I + S KSP Q+ +LIK++ AEK G+ P I V +MPC K
Sbjct: 304 SPGWVSFLEKFYPEMIR-FTSTCKSPMQMTSALIKSYYAEKKGLDPKDICVVAIMPCVAK 362
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K EA R + + G D V+T EL ++ + + E G D P +
Sbjct: 363 KFEAGRPE-HTMANGDPYTDAVLTTRELGWMIKSYGIDFNVLPE--GEFDRPMGISSGAA 419
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFCIA 367
+ +GG L A +L E +EF +R I+EAT + + ++
Sbjct: 420 DIF---GATGGVMEAALRTAAVKLTGEELGPLEFAEVRGVTGIKEATIKINGMEINIAVS 476
Query: 368 NGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP------KETALEL 421
NG N + L++ +K Y +EIMACP GC+ GG Q P + A L
Sbjct: 477 NGLNNAKKLLESIKSGEKNYHLVEIMACPGGCIMGGGQPYPPVYQDPMDPEISRARAKAL 536
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
I EN + HLY +LG + +K +L+T+Y
Sbjct: 537 YGIDAQKQLRRSHENPAIAHLYAEFLGEPNGEKAHQLLHTTYQ 579
>gi|310658148|ref|YP_003935869.1| Periplasmic [Fe] hydrogenase large subunit (Fe hydrogenlyase)
[[Clostridium] sticklandii]
gi|308824926|emb|CBH20964.1| Periplasmic [Fe] hydrogenase large subunit (Fe hydrogenlyase)
[[Clostridium] sticklandii]
Length = 456
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 199/445 (44%), Gaps = 65/445 (14%)
Query: 63 KKVEISLTDCLACSGCITSAESV----------LITQQSHEEVMKVIRE--------NNA 104
K I C+ C C+ S + + S +++K I+E NN
Sbjct: 31 KPQSIDENKCVLCGQCVQMCSSFASVFDEEIEPIEKKLSDRKMLKGIKEPLFAAYYDNNI 90
Query: 105 HKASS--NENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIA 161
HK N+ + V+ A +++ F + + K+ ++LG D V D +
Sbjct: 91 HKVVDILNDKNQFSVVQCAPAVRVAIAEDFGMDLGSLTPGKMAAALRKLGFDRVYDTNFS 150
Query: 162 HCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGS 220
+++E E ++R P+FTS CP WV Y E+SH E+ L ++S KSPQQ+ G+
Sbjct: 151 ADLTIMEEGTELIERVTKNEKLPMFTSCCPAWVKYMEQSHPEY-LDHLSTCKSPQQMAGA 209
Query: 221 LIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL 280
+ KT+ A+ I V++MPC K E+ R + + G RDVD V+T EL L+
Sbjct: 210 IFKTYGAKLDNKSAKDIASVSIMPCTCKSFESERTEMNSS--GERDVDVVLTTRELAYLI 267
Query: 281 AN-ELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPGE 336
++ LQEE D P L N TG+G G V+ AIR
Sbjct: 268 KEMDIDFVNLQEEN---FDQP----------LGNYTGAGNIFGVTGGVMEAAIRT----G 310
Query: 337 SPVVEFKPLRNPDI---------REATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPY 387
++ +P+ N D+ E+ GD+ L+ + G +N++ +I+ +K + Y
Sbjct: 311 YELITNQPIDNVDVVAVRGNKNFSESIIKVGDLELKVAVVAGLKNVEPIIEAMKNGKADY 370
Query: 388 DFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR-------ENATLE 440
F+E+M CP GC++GG Q KV PK + E + + + EN ++
Sbjct: 371 HFVEVMTCPEGCISGGGQ---PKVLLPKHKPMAYENRISGTYQHDSESKLRKSHENPAIK 427
Query: 441 HLYKAWLGGKSTDKGKHMLNTSYHN 465
LYK +L K +L+T Y++
Sbjct: 428 KLYKDFLKNPLGHKSHELLHTKYYS 452
>gi|302391022|ref|YP_003826842.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Acetohalobium arabaticum DSM 5501]
gi|302203099|gb|ADL11777.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Acetohalobium arabaticum DSM 5501]
Length = 571
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 193/400 (48%), Gaps = 30/400 (7%)
Query: 71 DCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
DC C C+T+ + I HE V R N A + + K +V+ A ++LG
Sbjct: 192 DCTNCGQCLTACPTGAI----HE----VYRINEVISALHDPD-KHVVVQTAPAVRVALGE 242
Query: 131 KFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F + S K+ K++G D V D +++E EF+DR + G PL TS
Sbjct: 243 EFDMESGINTEGKMVTAMKKMGFDKVFDTNFTADLTIMEEGFEFIDRLKNDGPLPLITSC 302
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGW+ +AE ++ + +L IS KSPQQ+ G+L K+ EK+ V P+ + V++MPC K
Sbjct: 303 SPGWIKFAEHNYSD-LLDNISSCKSPQQMFGALTKSFYPEKVDVDPADVVSVSIMPCTAK 361
Query: 249 KLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHNPH 307
K EA R + + GY+DVD V+T EL E++ L L+EE+ D P+
Sbjct: 362 KFEAEREEMTD--TGYQDVDHVLTTRELAEMIKEYGLNFVNLKEEE---YDDPFGISTGA 416
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
++ +GG L A L E V+ + +R + I+EA T++ +
Sbjct: 417 AVIF---GATGGVMEAALRTAYEVLTEEELGNVDLEMVRGFEGIKEAEVDINGQTVKVAV 473
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEK-VASPKETALELETI 424
A+G N L+ + + Y FIEIMACP GCLNGG Q I N+ V + L
Sbjct: 474 ASGLENAHQLL----KHKDDYHFIEIMACPGGCLNGGGQPISNDSDVLEKRREGLYNTDK 529
Query: 425 LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
+ KS EN ++ LY +L ++ L+T YH
Sbjct: 530 EREFRKS--HENPAIQKLYDDYLEEPLSEVSHKYLHTHYH 567
>gi|373457613|ref|ZP_09549380.1| hydrogenase, Fe-only [Caldithrix abyssi DSM 13497]
gi|371719277|gb|EHO41048.1| hydrogenase, Fe-only [Caldithrix abyssi DSM 13497]
Length = 573
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 194/400 (48%), Gaps = 20/400 (5%)
Query: 67 ISLTDCLACSGCI-TSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++++ C+ C C+ L + S +EV ++ N K ++ + ++LA +
Sbjct: 184 LNVSSCIGCGQCVLVCPTGALRERSSLKEVTDALQ--NPEKFVVVQHAPAVSVTLAEE-- 239
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
G K +++ L +RLG D V D + +++E +E ++R +GG P+
Sbjct: 240 --FGLKAGSDADRL---LVNALRRLGFDRVFDTAFSADLTIMEEASELVERLQNGGSIPM 294
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS PGWV + E+ + EFI P +S KSPQQ+MG++IK A + G+ P I+ V++MP
Sbjct: 295 MTSCSPGWVKFVEQFYPEFI-PNLSTCKSPQQMMGAVIKNIFAREQGISPDKIFSVSVMP 353
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK EA R +F + GY D+D V+T EL L+ + K D P+ +
Sbjct: 354 CTAKKFEAERPEFSHN--GYADIDAVLTTRELIRLI--RMYGIEFDSLKPDEPDLPFGKR 409
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLR 363
+ L G+GG L A + E + F+ +R IREA D+ L
Sbjct: 410 STAGKLF---GGTGGVMEAALRTAYFLITGKEPQKIVFEEVRGLKGIREARVKIADIELG 466
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELET 423
+ANG +N + L++++K R FIE+M CP GC+ GG Q + AS + L
Sbjct: 467 VAVANGIQNAKALLEQIKAGRDDLHFIEVMTCPGGCVGGGGQPFDTCPASIRTRLQALYQ 526
Query: 424 ILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
I + A +N ++ LY +L + + +L+T Y
Sbjct: 527 IDRNEAVRASHQNPLIQELYDRYLERPLSHRSHELLHTKY 566
>gi|338729902|ref|YP_004659294.1| hydrogenase, Fe-only [Thermotoga thermarum DSM 5069]
gi|335364253|gb|AEH50198.1| hydrogenase, Fe-only [Thermotoga thermarum DSM 5069]
Length = 583
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 209/413 (50%), Gaps = 42/413 (10%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+AC C IT+ S +V KV+ E H K +++ A ++LG
Sbjct: 188 TDCIACGQCSVFCPVGAITENS--QVRKVLEELEKHD-------KVLIVQTAPATRVALG 238
Query: 130 AKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F L + K+ +RLG D V D A +++E +EFL+R +GG P+FTS
Sbjct: 239 EEFGLEPGSISTGKMVAALRRLGFDYVFDTNFAADLTIMEEGSEFLERLKNGGPFPMFTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP W+ EK + +FI P +S KSP Q++G+++KT+ A+K+ V P +I+ V++MPC
Sbjct: 299 CCPAWINMMEKLYPQFI-PNVSSAKSPHQMLGAVVKTYFAKKINVDPKNIFLVSIMPCTA 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLA-NELATTTLQEEKDGILDWPWDEHNP 306
KK + R G VD V+T EL L+ ++ TL +E D P E
Sbjct: 358 KKDDIIRPQHMIN--GVPAVDVVLTTRELAKLIKIKKIPFATLPDEN---YDDPLGE--- 409
Query: 307 HRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGESPV--VEFKPLRNPD-IREATFTC 357
TG+G G V+ A+R +L G+ P+ +EF+ +R + I+EAT
Sbjct: 410 -------STGAGAIFGVTGGVMEAALRTAYELGLGK-PLGKIEFESVRGLEGIKEATIDF 461
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR--NEKVASPK 415
L+ +A+G N++ L+ K+ + YDF+EIMAC GC+ GG Q + ++ V +
Sbjct: 462 NGKKLKVAVAHGGLNVRRLLDKIVAGEVYYDFVEIMACSGGCIGGGGQPKSLDKDVLVKR 521
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
A+ L + KS EN +++ LY+ +L + L+T+Y + K
Sbjct: 522 MKAIYTIDELSVIRKS--HENPSIKKLYQEFLEHPLSHVAHETLHTTYMDRSK 572
>gi|331092597|ref|ZP_08341416.1| hypothetical protein HMPREF9477_02059 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330400608|gb|EGG80222.1| hypothetical protein HMPREF9477_02059 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 580
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 179/352 (50%), Gaps = 44/352 (12%)
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA--SSNENTKTIVLSL 120
K +I DC C CIT H V + ++ KA + + K V+ +
Sbjct: 179 KNRKIEEADCSLCGQCIT-----------HCPVGALRERDDTDKAWEAIADKDKITVVQV 227
Query: 121 AIQPVLSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
A + G LS E+ + K+ +++G D V D + +++E NEFL+RFLS
Sbjct: 228 APAVRTAWGESLGLSREEATIGKIVDSLRQMGFDYVFDTTFSADLTIMEEGNEFLERFLS 287
Query: 180 G---GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
G P+FTS CPGW+ + KS ++P +S KSPQQ+ G+++KT+ A+ +GV+P +
Sbjct: 288 GELKTRPMFTSCCPGWIRFI-KSQYPHLVPQLSTAKSPQQMFGTVMKTYFAKSIGVNPEN 346
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDG 295
I V++MPC KK E + +Y E G+ DVD V+T EL ++ ++ + +TL
Sbjct: 347 ICTVSIMPCVAKKGERNMELYYEEYAGH-DVDIVLTTRELTRMIRSSHIKPSTLS----- 400
Query: 296 ILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLR-- 346
D D L+ +G+G+G G V+ A+R L G++P + F +R
Sbjct: 401 --DVECDR------LMQDGSGAGVIFGATGGVMEAALRSAYYLLMGKNPDADAFSVVRSE 452
Query: 347 --NPDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
N + A F+ GD ++ + +G N + LI ++ + YDF+E+MACP
Sbjct: 453 KFNQGVISAEFSIGDAKIQTAVVSGLGNTRKLIDAIEHGDVHYDFVEVMACP 504
>gi|187932399|ref|YP_001886496.1| iron hydrogenase 1 [Clostridium botulinum B str. Eklund 17B]
gi|187720552|gb|ACD21773.1| iron hydrogenase 1 [Clostridium botulinum B str. Eklund 17B]
Length = 565
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 187/407 (45%), Gaps = 40/407 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+ C C + I +S +V V KA N + +V +A ++LG
Sbjct: 187 TDCVNCGQCANVCPTGAIVVKS--DVKPV------WKAIYNPKQR-VVAQVAPAVRVALG 237
Query: 130 AKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFT 186
+F + E V+ K+ ++LG D + D + +++E NEFL + SG PLFT
Sbjct: 238 EEFGIKPGENVMDKIVAAMRKLGFDEIYDTSLTADMTIIEESNEFLQKLESGDDKLPLFT 297
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV Y E H E ++ Y+S KSP Q+ GS+IK + E + V +MPC
Sbjct: 298 SCCPAWVRYVETKHPE-LMKYVSTCKSPMQMFGSVIKEYFKENDSLEEKETISVAIMPCT 356
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA+R +F G +D+D VIT EL + NE + E + D P+
Sbjct: 357 AKKAEAAREEFITN--GIKDIDYVITTTEL-CKMINEAGLQFDKIEPES-SDMPFS---- 408
Query: 307 HRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---IREATFTCG 358
L +G G +GG V+ + +EF +R D I E F G
Sbjct: 409 ----LYSGAGVIFGVTGGVTEAVIRGVVEDKSSKALKEIEFIGVRGMDGVKICEVPF--G 462
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+ LR + +G N +NLI K++ +DF+E+MACP GC+ G Q + K + KE A
Sbjct: 463 EKNLRIGVVSGLANAENLIDKIQSGEEHFDFVEVMACPGGCVAGAGQPFSLKEGN-KERA 521
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
L + +EN L LY L ++ K +L+ Y +
Sbjct: 522 KGLYKVDKVTQIKRSQENPVLISLYNGLL----KERSKELLHVHYEH 564
>gi|188588162|ref|YP_001921431.1| periplasmic [Fe] hydrogenase 1 [Clostridium botulinum E3 str.
Alaska E43]
gi|188498443|gb|ACD51579.1| hydrogenase [Clostridium botulinum E3 str. Alaska E43]
Length = 565
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 187/407 (45%), Gaps = 40/407 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+ C C + I +S +V V KA N + +V +A ++LG
Sbjct: 187 TDCVNCGQCANVCPTGAIVVKS--DVKPV------WKALYNPKQR-VVAQVAPAVRVALG 237
Query: 130 AKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFT 186
+F + E V+ K+ ++LG D + D + +++E NEFL + SG PLFT
Sbjct: 238 EEFGVKPGENVMDKIVAAMRKLGFDEIYDTSLTADMTIIEESNEFLQKLESGDNKLPLFT 297
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV Y E H E ++ Y+S KSP Q+ GS+IK + E + V +MPC
Sbjct: 298 SCCPAWVRYVETKHPE-LMKYVSTCKSPMQMFGSVIKEYFKENDSLEEKETISVAIMPCT 356
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA+R +F G +D+D VIT EL + NE + E + D P+
Sbjct: 357 AKKAEAAREEFITN--GIKDIDYVITTTEL-CKMINEAGLQFDKIEPES-SDMPFS---- 408
Query: 307 HRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---IREATFTCG 358
L +G G +GG V+ + +EF +R D I E F G
Sbjct: 409 ----LYSGAGVIFGVTGGVTEAVIRGVVEDKSSKALKEIEFIGVRGMDGVKICEVPF--G 462
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+ LR + +G N +NLI K++ +DF+E+MACP GC+ G Q + K + KE A
Sbjct: 463 EKNLRIGVVSGLANAENLIDKIQSGEEHFDFVEVMACPGGCIAGAGQPFSLKEGN-KERA 521
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
L + +EN L LY L ++ K +L+ Y +
Sbjct: 522 KGLYKVDKVTQIKRSQENPVLISLYNGLL----KERSKELLHVHYEH 564
>gi|383755464|ref|YP_005434367.1| putative iron hydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367516|dbj|BAL84344.1| putative iron hydrogenase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 585
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 198/408 (48%), Gaps = 32/408 (7%)
Query: 70 TDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
TDC+ C C + ++ + ++V+ +++N TK +++ +A ++L
Sbjct: 196 TDCILCGQCSLVCPTGAIVEKDDTQKVLDALQDN----------TKHVIVQVAPSVRVAL 245
Query: 129 GAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F L +V ++ K LG D V D +++E +EFL R + G P+ T
Sbjct: 246 GDAFGLEPGAIVTGQMVTALKLLGFDKVFDTNFGADLTIMEEGHEFLHRLNNDGVLPMMT 305
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV Y EK H + ++S KSP + G++ KT+ A++ G+ P I V++MPC
Sbjct: 306 SCSPGWVNYMEK-HFPSCIDHLSSAKSPMSMFGAIAKTYYAQQAGLKPQEIVTVSIMPCT 364
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA+R + + GY+DVD V+T EL L+ + E D D P
Sbjct: 365 AKKFEAARPEMGRD--GYQDVDIVLTTRELIKLIKYVGLSIGKLPEND--FDSPLG---- 416
Query: 307 HRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDV 360
L +G G +GG L ++ VEF +R D I+EAT
Sbjct: 417 ----LASGAGAIFGATGGVMEAALRTVYEKVTGKTLEKVEFMDVRGFDGIKEATIHLPGR 472
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALE 420
+R +A+ +N + +++++K+ PYDFIEIMACP GC+ GG Q A K+
Sbjct: 473 DVRIAVAHTLKNARKIMEQVKKGTSPYDFIEIMACPGGCIGGGGQPIGTTNAIRKQRIAA 532
Query: 421 LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
L I L + EN ++ LY+ +LG +++ +L+T YH + K
Sbjct: 533 LYEIDRTLPIRKSHENPDIQTLYQDFLGEPLSERAHELLHTHYHKVDK 580
>gi|110799871|ref|YP_697035.1| iron hydrogenase [Clostridium perfringens ATCC 13124]
gi|4239873|dbj|BAA74726.1| hydrogenase [Clostridium perfringens]
gi|7959055|dbj|BAA95936.1| hydrogenase [Clostridium perfringens]
gi|110674518|gb|ABG83505.1| iron hydrogenase [Clostridium perfringens ATCC 13124]
Length = 572
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 188/402 (46%), Gaps = 27/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C CI + ++++SH E ++ + N+ K +++++A S+G
Sbjct: 188 TNCLLCGQCIAACPVDALSEKSHIERVQ---------EALNDPEKHVIVAMAPAVRTSMG 238
Query: 130 AKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + + Q V KL + LG D V D+ +++E E ++R + G P+ TS
Sbjct: 239 ELFKMGYGQDVTGKLYTALRELGFDKVFDINFGADMTIMEEATELIERIKNNGPFPMLTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV E E + +S KSPQQ+ G+ KT+ + + P ++ VT+MPC
Sbjct: 299 CCPSWVREVENYFPELV-ENLSSAKSPQQIFGAASKTYYPQVADIDPKKVFTVTVMPCTS 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + NE G R++D VIT EL ++ + A + +DG +D E+
Sbjct: 358 KKFEADRPEMENE--GIRNIDAVITTRELARMI--KAAKIDFAKLEDGEVDPAMGEYTGA 413
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFCI 366
++ +GG L A + V+++ +R I+EA + +
Sbjct: 414 GVIF---GATGGVMEAALRTAKDFMENDNLDNVDYEAVRGLAGIKEAEVEIAGNEYKLAV 470
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILC 426
+G N+ L++ K Y FIE+MACP GC+NGG Q S K E+ +
Sbjct: 471 VSGAANVFELVKSGKIN--DYHFIEVMACPGGCVNGGGQPHISAEDSDKMDIREVRASVL 528
Query: 427 -----DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L K + +N+ L +Y++++G + +L+ Y
Sbjct: 529 YNQDKNLEKRKSHQNSALLKMYESYMGKPGHGRAHELLHMKY 570
>gi|335048205|ref|ZP_08541225.1| ferredoxin hydrogenase [Parvimonas sp. oral taxon 110 str. F0139]
gi|333758005|gb|EGL35563.1| ferredoxin hydrogenase [Parvimonas sp. oral taxon 110 str. F0139]
Length = 574
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 194/411 (47%), Gaps = 47/411 (11%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+C C C++ + + + S + +V R + + TKT+++ A ++LG
Sbjct: 192 TNCTFCGQCLSVCPTGALAEVS--SIQQVTR-------ALMDKTKTVIVQTAPAVRVALG 242
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F + VV K+ + +G D V D A + +E EF+ RF G P+ TS
Sbjct: 243 EEFGMEPGTVVTGKMVTALRNIGFDYVFDTDFAADLTTMEEAKEFVSRFEKGENLPILTS 302
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV + E + E +L S KSP ++ GS+ K++ AEK+ + P I V++MPC
Sbjct: 303 CCPSWVNFIENNFPE-MLHIPSSCKSPHEMFGSVAKSYFAEKMNIDPKDIVVVSVMPCVA 361
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK E++R + N+ G DVD V++ E+ ++ KD +D+P E +
Sbjct: 362 KKYESARPELSNK--GLSDVDYVLSTREIAHMI------------KDCAMDFPKLEDSDF 407
Query: 308 RMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES----PVVEFKPLRNPDIREATFTC 357
++ +G+G G V+ A+R + GE E K LR +EA
Sbjct: 408 DSIMGESSGAGVIFGSTGGVMEAALRTAYNMITGEDLQNVEYTELKDLRG--FKEAEIEI 465
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI---RNEKVASP 414
++ + +G N + L+ +K K YD IEIMACP GC+ GG Q + +
Sbjct: 466 KGKKIKAAVVSGLGNARKLLNSIKSKEKTYDIIEIMACPGGCIAGGGQPFIHGDTDIIEK 525
Query: 415 KETALELETILCDLAKS--EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ + E D KS +N +++ +Y +LG ++ H+L+T+Y
Sbjct: 526 RMHGIHRE----DRNKSIRLSYKNPSIQKIYNEYLGEPGGERAHHLLHTTY 572
>gi|158258984|dbj|BAF82036.1| Fe-hydrogenase [Pseudotrichonympha grassii]
Length = 467
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 191/408 (46%), Gaps = 23/408 (5%)
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
VE+S T+C+ C C IT+ ++ ++ N+ K V A
Sbjct: 74 VELSKTNCIGCGQCTLVCRPGAITEVDEIPIL--------LESLKNKKGKVFVAQTAPAI 125
Query: 125 VLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG-G 182
++L F V KL K++G D V D A ++ E EF++R GG
Sbjct: 126 RVNLSEIFGFPVGTVTEGKLVASLKKIGFDYVFDTSFAADLTIAEEATEFVERVKKGGVF 185
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CP WV Y EKS+ + I P +S KSP ++G+LIKT A+ + P I V++
Sbjct: 186 PMFTSCCPAWVNYVEKSNPQLI-PNLSSCKSPMSMLGALIKTDFAKIKKIDPRSIVSVSI 244
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK EA R++ +E ++ D VI+ EL L+ ++ ++ D D +
Sbjct: 245 MPCTAKKDEARRSELSDES--GQNTDIVISTRELARLIKSK--KIDYKKIPDQKYDKLYA 300
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR--NPDIREATFTCGDV 360
E+ ++ SGG L A + L ++ P+R I+ +
Sbjct: 301 EYTGGGVIF---GSSGGVMEAALRSAYQILTGNPLSQLDILPIRAGKDGIKFSEVHINGS 357
Query: 361 TLRFCIANGFRNIQNLIQKLKRKR---LPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
T++ + G N + L++K+++K F+E+MACP GC+NGG + + + ++
Sbjct: 358 TVKVAVCQGVANAKKLVEKIQKKDPSVADLKFVEVMACPGGCVNGGGSSKAKNAKAVQDR 417
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
A L + +L + +N+ L+ LY+ L G + + +L+T + +
Sbjct: 418 AGALYKLDSNLKQRVSLDNSELKELYRRSLKGFGSHEAHEILHTHFKS 465
>gi|374316822|ref|YP_005063250.1| hydrogenase, Fe-only [Sphaerochaeta pleomorpha str. Grapes]
gi|359352466|gb|AEV30240.1| hydrogenase, Fe-only [Sphaerochaeta pleomorpha str. Grapes]
Length = 582
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 187/379 (49%), Gaps = 23/379 (6%)
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVG 159
E + +++ + K +V+ +A + L F L V K + +++G D++ D
Sbjct: 211 ETDIFRSAVADPEKKVVVQIAPSIRVGLSESFGLPSGTVTTKKIYTALRKIGADVIHDTN 270
Query: 160 IAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVM 218
+ +++E +E ++R +GG P TS CP W+ Y EK + + +L +S KSP +
Sbjct: 271 FSADLTIMEEGSELVNRLTTGGVLPQLTSCCPAWIDYVEKYYPD-LLDNVSSAKSPMMMQ 329
Query: 219 GSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEV 278
G++ KT+ A+K G+ P+ I+ V +MPC KK E R D GY DVD V+T EL
Sbjct: 330 GAITKTYYAQKAGIDPAKIFSVAIMPCTAKKYEIIRDDNMQAS-GYPDVDLVLTTRELAR 388
Query: 279 LL-ANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGES 337
L+ ++ + L+EE+ D P E++ + +GG + A + E
Sbjct: 389 LIKSSGMDFLKLEEEE---ADSPIGEYSGAGTIF---GATGGVMEAAVRTAYHLVTKKEM 442
Query: 338 PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKR-----LPYDFIE 391
VE + +R D I++ T +R + +G N++ L+ +++ + PY+FIE
Sbjct: 443 EKVEVEAVRGLDNIKKGTVDFDGTPVRVAVVHGLSNVKVLMDEIRAAKAEGRTAPYEFIE 502
Query: 392 IMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLG 448
IMAC GC+ GG Q KE + E + D S+ R +N ++ +Y+ +L
Sbjct: 503 IMACRGGCIAGGGQPYGADDELRKERS---EGLYQDDKDSKVRCSHQNPSILKIYEDFLT 559
Query: 449 GKSTDKGKHMLNTSYHNIP 467
+ + H+L+T YH IP
Sbjct: 560 EPMSHEAHHLLHTKYHEIP 578
>gi|339441749|ref|YP_004707754.1| hypothetical protein CXIVA_06850 [Clostridium sp. SY8519]
gi|338901150|dbj|BAK46652.1| hypothetical protein CXIVA_06850 [Clostridium sp. SY8519]
Length = 579
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 208/409 (50%), Gaps = 40/409 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
+DC C CIT + ++ +++ +++ + ++ T V+ +A + G
Sbjct: 186 SDCALCGQCITHCPVGALKER--DDIGRLVN-------AVDDPEITTVVQIAPSIRAAWG 236
Query: 130 AKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG---PLF 185
LS E+ + +L K LG D V D + +++E +EFL+R L GG P+F
Sbjct: 237 EMLGLSPEEASMERLSATLKFLGFDYVFDTDFSADLTIMEEGSEFLER-LKGGRRDFPMF 295
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CPGWV + + + E+ ++S KSPQQ+ G++IK+++A+ G+ P I+ +++MPC
Sbjct: 296 TSCCPGWVRFLKSHYPEYT-DHLSTAKSPQQMFGAVIKSYVAQLKGLDPKKIFSISIMPC 354
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK E S N+ G DVD V+T EL L+ ++ L EE LD P
Sbjct: 355 LAKKQE-SDIPVMNDACGDPDVDVVLTNRELVRLIRSQHVKPELLEEVP--LDDP----- 406
Query: 306 PHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREATFTC 357
+ G+G+G G V+ A+R L GE+P + F +R D +EA F
Sbjct: 407 -----MGFGSGAGNIFGATGGVMEAALRSAYYLATGENPDPDAFCAVRGMDGWKEAEFEI 461
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNEKVASPK 415
+ L+ + NG N L++ +K+ R+ YDF+E+MACP GC+ GG Q +++A+ +
Sbjct: 462 SGIPLKIAVVNGLGNADRLLKAMKKGRVSYDFVEVMACPGGCVGGGGQPFYDGKEMAASR 521
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
L DL S EN ++ +Y +LG +++ +L+T +H
Sbjct: 522 APILYAFDRKTDLRFSH--ENPSIRKIYADYLGAPLSERSHKLLHTDHH 568
>gi|307718326|ref|YP_003873858.1| hypothetical protein STHERM_c06260 [Spirochaeta thermophila DSM
6192]
gi|306532051|gb|ADN01585.1| hypothetical protein STHERM_c06260 [Spirochaeta thermophila DSM
6192]
Length = 596
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 202/409 (49%), Gaps = 43/409 (10%)
Query: 72 CLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+AC C+ L +++ E V + + + K +V +A ++LG
Sbjct: 193 CVACGQCVVYCPVGALYEKEAVERVWEALADPE----------KVVVAQIAPAVRVALGE 242
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F + E V+ K+ +RLGVD V D + +++E EFL R G PL TS
Sbjct: 243 EFGMKPGELVIGKIYAALRRLGVDYVFDTNFSADLTIMEEGTEFLHRLEKGERLPLITSC 302
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGW+ +AE + + +LP++S KSPQQ+MG+++KT+ A+ G+ PS I +++MPC K
Sbjct: 303 SPGWIKFAETYYPD-LLPHLSTCKSPQQMMGAVVKTYFAQAKGIPPSRIVSLSIMPCTAK 361
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWDEHNPH 307
K EA R + + G+ DVD V+T EL ++ + L+EE P
Sbjct: 362 KFEAQREEMRDS--GFWDVDIVLTTRELARMIRQAGIRFDQLKEE-------------PA 406
Query: 308 RMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRN-PDIREATFTCGD 359
+L + +G+G G V+ A+R ++ G+S P VEF +R ++EA
Sbjct: 407 DPVLSSYSGAGTIFGATGGVMEAALRTAYEIKTGKSLPKVEFAQVRGVKGVKEAVIELNG 466
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKR-----LPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
+R +A+G N + ++ +++ + LPY FIE+MACP GC+ GG Q +
Sbjct: 467 TQIRVAVAHGLSNARKVLDRVREAKERGEPLPYHFIEVMACPGGCVGGGGQPLPSPLKKR 526
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+E + L L + EN + LY+ +L + + +L+T Y
Sbjct: 527 EERLMGLYAEDSALPVRKSHENPEVRALYEHFLKEPNGELPHTLLHTHY 575
>gi|374997362|ref|YP_004972861.1| hydrogenase, Fe-only [Desulfosporosinus orientis DSM 765]
gi|357215728|gb|AET70346.1| hydrogenase, Fe-only [Desulfosporosinus orientis DSM 765]
Length = 526
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 192/417 (46%), Gaps = 48/417 (11%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C CI S I+++ +V+K I + N T+V+ A + LG
Sbjct: 115 CVNCGQCIQWCPSGAISERDDINKVLKAIADPNI----------TVVVQTAPATRIGLGE 164
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLFT 186
+F + V K ++LG D++ D +++E E + R L P FT
Sbjct: 165 EFGMPVGTNVQGKQVAALRKLGFDVIFDTNFTADLTIMEEGTELVKRIKGELDKPIPQFT 224
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + E + + I P +S KSPQQ+ G+L+KT+ AE V P I+ V +MPC
Sbjct: 225 SCCPGWVKFVEYFYPDLI-PNLSSAKSPQQMEGTLMKTYYAETKNVDPKKIFSVAIMPCT 283
Query: 247 DKKLEASRADFYN--EELG----YRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
KK E+ R + +EL DVD V+T EL ++ K +D+
Sbjct: 284 AKKFESQRPEMATAGKELKDSKVTPDVDAVLTTRELARMI------------KRAGIDFN 331
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESP---VVEFKPLRN-PDI 350
+ + L+ +GTG+G G V+ A+R L G+ P + P+R +
Sbjct: 332 SLPDDQYDQLMGSGTGAGAIFGTTGGVMEAAVRSAYYLITGQQPPSALWGLTPVRGMQGV 391
Query: 351 REATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
+EA V ++ + +G N + ++ ++K P+ FIE+MACP GC GG Q R
Sbjct: 392 KEAAVNIPGVGDIKVAVISGLANARKVMDQIKEGNAPWAFIEVMACPGGCEYGGGQPRAS 451
Query: 410 KVASPK---ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
S + A L TI + +N ++ +Y +L ++K + +L+T+Y
Sbjct: 452 SPPSDEVRNRRAASLYTIDANAKLRNSHDNPQIKQVYADFLTSPMSEKAEELLHTTY 508
>gi|258513524|ref|YP_003189746.1| hydrogenase, Fe-only [Desulfotomaculum acetoxidans DSM 771]
gi|257777229|gb|ACV61123.1| hydrogenase, Fe-only [Desulfotomaculum acetoxidans DSM 771]
Length = 513
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 193/411 (46%), Gaps = 44/411 (10%)
Query: 72 CLACSGCITSAESVLITQ-QSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + I++ E+V + I++ K +V+ A ++LG
Sbjct: 113 CVNCGQCALWCPTGAISECDDSEKVWEAIQDPG----------KVVVVQTAPATRVALGE 162
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLFT 186
+F L V+ + +RLG D++ D +++E E + R L P FT
Sbjct: 163 EFGLEPGAWVMGQQVAALRRLGFDVIFDTNFTADLTIMEEATELIRRVKGDLKKPLPQFT 222
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGW+ + E + + L +S KSPQQ++G+L+KT+ A++ G++P +I+ V +MPC
Sbjct: 223 SCCPGWIKFCEYFYPDLFL-NLSTCKSPQQMLGALVKTYFAKEKGLNPKNIFSVAIMPCT 281
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA+R++ ++ GYRDVD V+T EL L L++ + P + ++P
Sbjct: 282 AKKFEANRSEM--KDSGYRDVDSVLTTRELSRL---------LKKHNIDLTKLPAENYDP 330
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQL------CPGESPVVEFKPLRN-PDIREATFTCGD 359
G G V+ A+R P S +++ P+R ++EA
Sbjct: 331 LMGKSTGGAVIFGATGGVMEAAVRTAYFFITQSPPPSGLLQLTPVRGLAGVKEAAVEIPG 390
Query: 360 V-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
V +R + +G N + +++ ++ P+ F+E M CP GC +GG Q R A P
Sbjct: 391 VGRIRVAVCHGMGNAREILEATRKGNAPWHFVEFMCCPGGCQSGGGQPRT---AVPPSDE 447
Query: 419 LELETIL------CDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ L+ I + E EN + +Y+ +L ++ + +L+T Y
Sbjct: 448 IRLKRIASLYNADAKMVMRESHENPDILTIYQKFLEHPMSELAERLLHTEY 498
>gi|150018922|ref|YP_001311176.1| hydrogenase, Fe-only [Clostridium beijerinckii NCIMB 8052]
gi|149905387|gb|ABR36220.1| hydrogenase, Fe-only [Clostridium beijerinckii NCIMB 8052]
Length = 567
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 194/409 (47%), Gaps = 48/409 (11%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
TDC+ C C T + I +S + N KA N + ++ +A ++LG
Sbjct: 187 TDCVNCGQCATVCPTGAIVVKSDIK--------NVWKAIYNHKQR-VIAQVAPAVRVALG 237
Query: 130 AKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFT 186
+F + E V+ K+ ++LG + + D ++ +++E EFL + S PLFT
Sbjct: 238 EEFGIKPGENVMGKIVAAMRKLGFENIYDTSLSADLTVIEESKEFLKKLESDDNKFPLFT 297
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV Y E + E +LPY+S KSP ++ GS++K + EK + V +MPC
Sbjct: 298 SCCPAWVRYVENKYTE-LLPYVSSCKSPMEMFGSVVKAYFKEKDSLENRETISVAVMPCT 356
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI-LDWPWDEHN 305
KK EA+R +F + + DVD VIT EL ++ ++ GI D E +
Sbjct: 357 AKKAEAAREEFIRDNIP--DVDYVITTAELCAMI-----------KEIGIQFDEIEAEAS 403
Query: 306 PHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGD 359
+ L +G G +GG V+ ++ +EF +R ++ D
Sbjct: 404 DIPLSLYSGAGVIFGVTGGVTEAVIREVVKDKSSRVLKDIEFIGVRGMKGVKTCELQVKD 463
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKE 416
++R I +G RN ++LI+K+K +DFIE+MACP GC+ G Q + EK E
Sbjct: 464 ESIRIGIVSGLRNAEDLIEKIKSGEEHFDFIEVMACPGGCIAGAGQPFGLMEEK----NE 519
Query: 417 TALELETI--LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
A L I + + +SE EN ++ LY+ L ++ K +L+ Y
Sbjct: 520 RAKGLYKIDKVTQIKRSE--ENLVVKSLYEGLLKNRT----KELLHVHY 562
>gi|78355522|ref|YP_386971.1| Fe-only hydrogenase, large and small subunits, cytoplasmic
[Desulfovibrio alaskensis G20]
gi|78217927|gb|ABB37276.1| Fe-only hydrogenase, large & small subunits, cytoplasmic
[Desulfovibrio alaskensis G20]
Length = 458
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 178/354 (50%), Gaps = 35/354 (9%)
Query: 127 SLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL- 184
++G +F + + +L +RLG D V D A +++E +E L R + G GPL
Sbjct: 119 AIGEEFGMPAGALTPGRLAAALRRLGFDRVYDTNFAADLTIMEEGSELLQR-MEGAGPLP 177
Query: 185 -FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
FTS CP WV YAE+ + +L ++S KSPQQ+ G++ K++ A+ GV P ++ V +M
Sbjct: 178 MFTSCCPAWVRYAEQQFPD-LLEHLSSCKSPQQMAGAVFKSYGAQLDGVDPRQVFSVAVM 236
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA R E G RDVD V+T EL +L + +D+
Sbjct: 237 PCTCKKAEAQRPGM--EHDGVRDVDAVLTTGELAAML------------RQAHIDFAALP 282
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATF 355
P L + +G+G G V+ A+R +L GE P E +R + IR AT
Sbjct: 283 DEPFDRPLGSYSGAGNIFGLTGGVMEAALRTAYELVTGEPVPCTELVYVRGGEGIRHATL 342
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNE 409
T T R + G ++++ L++ ++ +F+E+M CP GC++GG Q + +
Sbjct: 343 TMDGRTFRVAVVAGLQHVRPLLEAVRAGTCDVNFVEVMCCPQGCISGGGQPKVLLPFQRD 402
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+V + ++ AL +LA + EN ++ LY+ +LG + ++L+T Y
Sbjct: 403 EVYAARKAALYRHDA--ELACRKSHENPQVQALYREFLGEPLSHVSHNLLHTVY 454
>gi|315650047|ref|ZP_07903126.1| ferredoxin hydrogenase [Lachnoanaerobaculum saburreum DSM 3986]
gi|419720639|ref|ZP_14247859.1| 2Fe-2S iron-sulfur cluster-binding domain / NADH-ubiquinone
oxidoreductase-G iron-sulfur binding region / [FeFe]
hydrogenase, group A / iron hydrogenase, small subunit
multi-domain protein [Lachnoanaerobaculum saburreum
F0468]
gi|315487676|gb|EFU77980.1| ferredoxin hydrogenase [Lachnoanaerobaculum saburreum DSM 3986]
gi|383303201|gb|EIC94666.1| 2Fe-2S iron-sulfur cluster-binding domain / NADH-ubiquinone
oxidoreductase-G iron-sulfur binding region / [FeFe]
hydrogenase, group A / iron hydrogenase, small subunit
multi-domain protein [Lachnoanaerobaculum saburreum
F0468]
Length = 573
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 155/292 (53%), Gaps = 19/292 (6%)
Query: 114 KTIVLSLAIQPVLSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENE 172
KT+V+ +A + G F L + V K+ K++G D V D + +++E NE
Sbjct: 221 KTVVVQIAPAVRTAWGEVFGLKDKDATVGKIVDALKKMGADYVFDTSFSADLTIMEEANE 280
Query: 173 FLDRF---LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK 229
F+ R+ L G P+FTS CPGWV +A KS + +S KSPQQ+ G+++K++ AEK
Sbjct: 281 FVHRYTNGLIGDRPMFTSCCPGWVRFA-KSQFPRMAKSLSTAKSPQQMFGAVMKSYFAEK 339
Query: 230 LGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTT 288
+GV+P ++ V++MPC KK E F+ E G+ DVD +T EL ++ A+ + +
Sbjct: 340 IGVNPENMVSVSIMPCVAKKGEREMELFHGEYAGH-DVDIALTTRELTRMIRASHIDPKS 398
Query: 289 LQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNP 348
L KD + D P E++ ++ GT +GG L A + P FKP+R+
Sbjct: 399 L---KDVVADRPMGEYSGAGVIF--GT-TGGVMEAALRTAYSIIKKENPPSDAFKPVRSK 452
Query: 349 DIRE------ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMA 394
+E A F D+ L + +G N + LI K++R + YDF+E+MA
Sbjct: 453 SFQENDGTVEAKFKIDDIELNIAVVSGLGNTRKLINKIERGEVKYDFVEVMA 504
>gi|147677003|ref|YP_001211218.1| iron only hydrogenase large subunit [Pelotomaculum
thermopropionicum SI]
gi|146273100|dbj|BAF58849.1| iron only hydrogenase large subunit, C-terminal domain
[Pelotomaculum thermopropionicum SI]
Length = 530
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 192/422 (45%), Gaps = 51/422 (12%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T C+ C C + S I+++ K + E A K K +++ A ++LG
Sbjct: 121 TICINCGQCSMACPSGAISERDD---TKKVFEALADK------DKFVLVQTAPATRVALG 171
Query: 130 AKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLF 185
+F L V + +RLG + VLD A +++E E + R + P F
Sbjct: 172 EEFGLPPGTWVQGQQVAALRRLGFNAVLDTNFAADLTIMEEATELIKRIKGEVKKPLPQF 231
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS PGW+ + E + E I P IS KSPQQ+ G+L KT+ A G+ P +I V++MPC
Sbjct: 232 TSCSPGWIKFCEYFYPELI-PNISSCKSPQQMFGALAKTYYARARGIDPENIVSVSVMPC 290
Query: 246 YDKKLEASRADF-----YNEELGYRDVDCVITAVELEVLLA-NELATTTLQEEKDGILDW 299
KK EA R + Y + RDVD V+T EL +L ++ T L EE
Sbjct: 291 TAKKFEAQRPEMNASAKYWKRGNLRDVDVVLTTRELARMLKEKQIDLTALPEEN------ 344
Query: 300 PWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVEF---KPLRN-PD 349
+ L+ TG G V+ A R L G+ P F P+R
Sbjct: 345 -------YDKLMGEETGGAVIFGATGGVMEAAARTAYFLITGQEPPALFLNLTPVRGLAG 397
Query: 350 IREATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
++EA V TLR +++G N + ++ ++ + P+ F+E M CP GC+ GG Q R
Sbjct: 398 VKEAAAEIPGVGTLRVAVSHGMANGRKILNAVREGKAPWHFVEFMTCPGGCIAGGGQPRT 457
Query: 409 EKVASPKETALE-----LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
P +T E L L+K + EN + LY+ +LG ++ + +L+T Y
Sbjct: 458 --AVPPSDTVREQRLAALYKADASLSKRKSYENEEVAALYRDFLGHPMSELAEELLHTEY 515
Query: 464 HN 465
H+
Sbjct: 516 HS 517
>gi|114567439|ref|YP_754593.1| ferredoxin hydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338374|gb|ABI69222.1| Ferredoxin hydrogenase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 387
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 181/368 (49%), Gaps = 49/368 (13%)
Query: 63 KKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+K IS C+ C C+ + I + S E +K KA ++ + K +V+ A
Sbjct: 37 QKHHISPKKCINCGQCLINCPFNAIDEFSRVEELK--------KALAD-SQKFVVVQEAP 87
Query: 123 QPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR---FL 178
++LG +F + V K+ ++LG D V D +++E E + R FL
Sbjct: 88 AVRVALGEEFGQAPGTNVKNKMYAALRKLGFDKVYDTEFTADLTIMEEGTELIHRVYGFL 147
Query: 179 SGGG-------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
G P FTS CP W+ YAE ++ +LP+IS KSPQQ+ G++ KT+LAEKL
Sbjct: 148 GVPGFEEVGPLPQFTSCCPAWIKYAEDNY-PLVLPHISSAKSPQQMWGAVAKTYLAEKLN 206
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQE 291
V P++++ V++MPC KK E R +F G++DVD VIT EL ++
Sbjct: 207 VDPANMFSVSVMPCTAKKYECERPEFIAS--GHQDVDLVITTRELAQMI----------- 253
Query: 292 EKDGILDW---PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIR---QLCPGES-PVVEFKP 344
KD +D+ P +E + L G V+ A+R ++ GES VEF
Sbjct: 254 -KDAGIDFMGLPDEEADRFVGLSTGAATIFGATGGVMEAALRTAYEILSGESLGKVEFDA 312
Query: 345 LRNPD-IREATFTC------GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPS 397
+R D +REAT + + C+ G +++ N+I+ + R Y FIE+M CP
Sbjct: 313 VRGLDPVREATVEVPVKALGTSLPVSVCVVTGTKHVANVIEDVLAGRSKYHFIEVMNCPG 372
Query: 398 GCLNGGAQ 405
GC+NGG Q
Sbjct: 373 GCINGGGQ 380
>gi|373119594|ref|ZP_09533689.1| hydrogenase, Fe-only [Lachnospiraceae bacterium 7_1_58FAA]
gi|371662223|gb|EHO27430.1| hydrogenase, Fe-only [Lachnospiraceae bacterium 7_1_58FAA]
Length = 583
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 214/467 (45%), Gaps = 57/467 (12%)
Query: 27 KPIPIEKPSGPRTGAK---------IRIQDDGAYIQETNGREEKLK-----KVEISLTDC 72
+P+ I+ PS R AK + + G +GR K + + TDC
Sbjct: 133 EPLRIDNPSIVRDPAKCVKCGRCVKVCAEVQGCAALTYSGRSAGFKVTTAFDLPMDQTDC 192
Query: 73 LACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
+ C C + ++ EV I+ + H +++ +A + LG +
Sbjct: 193 VLCGQCSLVCPVGAIVETDYTNEVTAAIQNPSKH----------VIVQVAPSVRVGLGDE 242
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSEC 189
F + VV K+ + LG D V D + +++E +E L R GG P+ TS
Sbjct: 243 FGMEAGAVVTGKMVTALRMLGFDKVFDTNFSADLTIMEEGSELLKRIREGGKLPMITSCS 302
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGWV Y EK H E I ++S KSPQ + G++ KT+ A+K+G P + V++MPC KK
Sbjct: 303 PGWVTYLEKHHPELI-GHLSTAKSPQAMFGAVAKTYYAQKMGWDPHDVVSVSVMPCTAKK 361
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWPWDEHNPHR 308
EASR + + GY+DVD V+T EL L+ L + L E + D P
Sbjct: 362 YEASRPELGRD--GYQDVDYVLTTRELAKLIRYVGLDLSVLPESE---FDSPL------- 409
Query: 309 MLLVNGTGSG-----GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNP--DIREATFTC 357
GTGSG G V+ A+R +L G++ P +EF +R I+EAT
Sbjct: 410 -----GTGSGAGAIFGATGGVMEAALRTAYELYTGKTLPRLEFDAVRGDINAIKEATIDL 464
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
L+ + NG +N + LI++++R Y FIEIMACP GC+ GG Q A
Sbjct: 465 DGTPLKVAVTNGLKNAEELIRRVERGEADYIFIEIMACPGGCIGGGGQPIGTNNAVRDAR 524
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
L I L + EN ++ +Y+ + G + + +L+T YH
Sbjct: 525 IQALYEIDRSLPLRKSHENPEIKTIYEEFFGAPLSQRSHELLHTHYH 571
>gi|255657360|ref|ZP_05402769.1| putative iron-only hydrogenase, catalytic subunit [Clostridium
difficile QCD-23m63]
gi|296451826|ref|ZP_06893545.1| periplasmic hydrogenase [Clostridium difficile NAP08]
gi|296879778|ref|ZP_06903752.1| periplasmic hydrogenase [Clostridium difficile NAP07]
gi|296259305|gb|EFH06181.1| periplasmic hydrogenase [Clostridium difficile NAP08]
gi|296429249|gb|EFH15122.1| periplasmic hydrogenase [Clostridium difficile NAP07]
Length = 593
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 189/405 (46%), Gaps = 30/405 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+C C CI+ + +T+ + ++ V+ N+ KTIV+ +A +++
Sbjct: 192 TECTFCGQCISVCPTGALTEVDNVPKLWDVL----------NKKEKTIVVQVAPAVRVAI 241
Query: 129 GAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F L + K+ K LG + V D F+++E EF++R G P+ T
Sbjct: 242 GEEFGLEPGSISTGKMVAALKALGFEHVFDTNFGADFTIMEEATEFIERIQKGENLPILT 301
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK-LGVHPSHIYHVTLMPC 245
S CP WV + E ++ + L S KSPQ + GS+ K + A K LG++P +Y V++MPC
Sbjct: 302 SCCPAWVNFLEHNYPD-KLNLASSCKSPQGMFGSIAKNYYAPKILGINPEELYVVSVMPC 360
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EASR + E G DVD IT EL ++ A L +D D P +
Sbjct: 361 VAKKYEASREEL--SESGILDVDLSITTRELAKMIKE--AAIDLPNLQDQDFDNPLGKST 416
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRF 364
+ SGG L + ++ V F +R IREA+ T+
Sbjct: 417 GAASIF---GASGGVLEAALRTSYEKITNKTLDNVNFTNVRGLKGIREASIDVDGTTVNV 473
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETAL-E 420
CI N +N + ++ K++ Y IE+MACP GC+ G Q N ++ + AL E
Sbjct: 474 CIVNTLKNARKIMDKVRSGECKYHIIEVMACPGGCVGGAGQPYHHGNTEIVDRRANALYE 533
Query: 421 LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
++ + A + EN L+ +YK + G ++D L+T Y +
Sbjct: 534 IDR---NKAIRKSHENPDLQAIYKDFFGEPNSDVAHKYLHTHYFD 575
>gi|254977029|ref|ZP_05273501.1| putative iron-only hydrogenase, catalytic subunit [Clostridium
difficile QCD-66c26]
gi|255094356|ref|ZP_05323834.1| putative iron-only hydrogenase, catalytic subunit [Clostridium
difficile CIP 107932]
gi|255316109|ref|ZP_05357692.1| putative iron-only hydrogenase, catalytic subunit [Clostridium
difficile QCD-76w55]
gi|255518770|ref|ZP_05386446.1| putative iron-only hydrogenase, catalytic subunit [Clostridium
difficile QCD-97b34]
gi|255651948|ref|ZP_05398850.1| putative iron-only hydrogenase, catalytic subunit [Clostridium
difficile QCD-37x79]
gi|260684912|ref|YP_003216197.1| iron-only hydrogenase, catalytic subunit [Clostridium difficile
CD196]
gi|260688570|ref|YP_003219704.1| iron-only hydrogenase, catalytic subunit [Clostridium difficile
R20291]
gi|306521697|ref|ZP_07408044.1| putative iron-only hydrogenase, catalytic subunit [Clostridium
difficile QCD-32g58]
gi|384362581|ref|YP_006200433.1| iron-only hydrogenase, catalytic subunit [Clostridium difficile
BI1]
gi|260211075|emb|CBA66447.1| putative iron-only hydrogenase, catalytic subunit [Clostridium
difficile CD196]
gi|260214587|emb|CBE07153.1| putative iron-only hydrogenase, catalytic subunit [Clostridium
difficile R20291]
Length = 593
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 189/405 (46%), Gaps = 30/405 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+C C CI+ + +T+ + ++ V+ N+ KTIV+ +A +++
Sbjct: 192 TECTFCGQCISVCPTGALTEVDNVPKLWDVL----------NKKEKTIVVQVAPAVRVAI 241
Query: 129 GAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F L + K+ K LG + V D F+++E EF++R G P+ T
Sbjct: 242 GEEFGLEPGSISTGKMVAALKALGFEHVFDTNFGADFTIMEEATEFIERIQKGENLPILT 301
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK-LGVHPSHIYHVTLMPC 245
S CP WV + E ++ + L S KSPQ + GS+ K + A K LG++P +Y V++MPC
Sbjct: 302 SCCPAWVNFLEHNYPD-KLNLASSCKSPQGMFGSIAKNYYAPKILGINPEELYVVSVMPC 360
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EASR + E G DVD IT EL ++ A L +D D P +
Sbjct: 361 VAKKYEASREEL--SESGILDVDLSITTRELAKMIKE--AAIDLPNLQDQDFDNPLGKST 416
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRF 364
+ SGG L + ++ V F +R IREA+ T+
Sbjct: 417 GAASIF---GASGGVLEAALRTSYEKITNKTLDNVNFTNVRGLKGIREASIDVDGTTVNV 473
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETAL-E 420
CI N +N + ++ K++ Y IE+MACP GC+ G Q N ++ + AL E
Sbjct: 474 CIVNTLKNARKIMDKVRSGECKYHIIEVMACPGGCVGGAGQPYHHGNTEIVDRRANALYE 533
Query: 421 LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
++ + A + EN L+ +YK + G ++D L+T Y +
Sbjct: 534 IDR---NKAIRKSHENPDLQAIYKDFFGEPNSDVAHKYLHTHYFD 575
>gi|226322496|ref|ZP_03798014.1| hypothetical protein COPCOM_00267 [Coprococcus comes ATCC 27758]
gi|225209113|gb|EEG91467.1| hydrogenase, Fe-only [Coprococcus comes ATCC 27758]
Length = 578
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 202/420 (48%), Gaps = 49/420 (11%)
Query: 66 EISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+IS C C CIT L + E+V I ++ K +V +A
Sbjct: 182 KISEVSCSLCGQCITHCPVGALRERDDTEKVWDAIADDK----------KVVVAQVAPAV 231
Query: 125 VLSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG-- 181
+ G LS E+ V K+ K++G+D V D +++E NEFL RF G
Sbjct: 232 RAAWGEALGLSREEATVGKIMDALKKMGIDYVFDTSFTADLTIMEEGNEFLQRFTKGELN 291
Query: 182 -GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+FTS CPGWV + KS ++P +S KSPQQ+ GS++K++ AE +GV P +++ V
Sbjct: 292 LRPMFTSCCPGWVRFL-KSQYPHLVPQLSTAKSPQQMFGSVMKSYFAESIGVKPENMFTV 350
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
++MPC KK E++ FY E G+ + D V+T EL ++ + + ++D
Sbjct: 351 SIMPCVAKKGESNMELFYGEYAGH-ETDVVLTTRELTRMI------RSAHIDPASLVDRE 403
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRN----PD 349
D L+ TG+G G V+ A+R L G +P + FK +RN P
Sbjct: 404 CDP------LMKEWTGAGVIFGTTGGVMEAALRSAHYLVTGRNPDPDAFKIVRNPGGQPG 457
Query: 350 IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
+ EA GD T+R + +G N + LI+ ++ + YDF+E+MACP GC+ GG Q
Sbjct: 458 VVEAEIQLGDATVRAAVVSGLGNTRKLIEAIEHGEVHYDFVEVMACPGGCVGGGGQ---- 513
Query: 410 KVASPKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ +E A L L K+ P EN + LY+ + + K HML + HN
Sbjct: 514 PIHDGEELARTRGENLYFLDKNAPLRFSHENPDVLRLYRDFFEKPLSHKS-HMLLHTDHN 572
>gi|126701030|ref|YP_001089927.1| iron-only hydrogenase, catalytic subunit HymC-like [Clostridium
difficile 630]
gi|255102610|ref|ZP_05331587.1| putative iron-only hydrogenase, catalytic subunit [Clostridium
difficile QCD-63q42]
gi|255308436|ref|ZP_05352607.1| putative iron-only hydrogenase, catalytic subunit [Clostridium
difficile ATCC 43255]
gi|423082851|ref|ZP_17071434.1| putative ferredoxin hydrogenase [Clostridium difficile
002-P50-2011]
gi|423086301|ref|ZP_17074710.1| putative ferredoxin hydrogenase [Clostridium difficile
050-P50-2011]
gi|423089917|ref|ZP_17078263.1| putative ferredoxin hydrogenase [Clostridium difficile 70-100-2010]
gi|115252467|emb|CAJ70310.1| putative iron-only hydrogenase, catalytic subunit HymC-like
[Clostridium difficile 630]
gi|357547170|gb|EHJ29064.1| putative ferredoxin hydrogenase [Clostridium difficile
002-P50-2011]
gi|357547288|gb|EHJ29178.1| putative ferredoxin hydrogenase [Clostridium difficile
050-P50-2011]
gi|357557447|gb|EHJ38990.1| putative ferredoxin hydrogenase [Clostridium difficile 70-100-2010]
Length = 593
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 189/405 (46%), Gaps = 30/405 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+C C CI+ + +T+ + ++ V+ N+ KTIV+ +A +++
Sbjct: 192 TECTFCGQCISVCPTGALTEVDNVPKLWDVL----------NKKEKTIVVQVAPAVRVAI 241
Query: 129 GAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F L + K+ K LG + V D F+++E EF++R G P+ T
Sbjct: 242 GEEFGLEPGSISTGKMVAALKALGFEHVFDTNFGADFTIMEEATEFIERIQKGENLPILT 301
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK-LGVHPSHIYHVTLMPC 245
S CP WV + E ++ + L S KSPQ + GS+ K + A K LG++P +Y V++MPC
Sbjct: 302 SCCPAWVNFLEHNYPD-KLNLASSCKSPQGMFGSIAKNYYAPKILGINPEELYVVSVMPC 360
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EASR + E G DVD IT EL ++ A L +D D P +
Sbjct: 361 VAKKYEASREEL--SESGILDVDLSITTRELAKMIKE--AAIDLPNLQDQDFDNPLGKST 416
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRF 364
+ SGG L + ++ V F +R IREA+ T+
Sbjct: 417 GAASIF---GASGGVLEAALRTSYEKITNKTLDNVNFTNVRGLKGIREASIDVDGTTVNV 473
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETAL-E 420
CI N +N + ++ K++ Y IE+MACP GC+ G Q N ++ + AL E
Sbjct: 474 CIVNTLKNARKIMDKVRSGECKYHIIEVMACPGGCVGGAGQPYHHGNTEIVDRRANALYE 533
Query: 421 LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
++ + A + EN L+ +YK + G ++D L+T Y +
Sbjct: 534 IDR---NKAIRKSHENPDLQAIYKDFFGEPNSDVAHKYLHTHYFD 575
>gi|449131334|ref|ZP_21767550.1| hydrogenase, Fe-only [Treponema denticola SP37]
gi|448940167|gb|EMB21078.1| hydrogenase, Fe-only [Treponema denticola SP37]
Length = 596
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 192/409 (46%), Gaps = 31/409 (7%)
Query: 67 ISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+ +DC C CIT L + E+ + + + + K +V+ +A
Sbjct: 183 IADSDCSLCGQCITHCPVGALRERDDTEKFWRAVADPD----------KVVVVQVAPAIR 232
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---G 181
+ G L + V K+ KR+G D V D + +++E EFL+RF G
Sbjct: 233 TAWGEHLGLDLKDASVNKIFDALKRMGADYVFDTSFSADLTIMEEAYEFLERFSKGELKD 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS ++ ++S KSP Q+ G+++K++ AE +G P I+ V
Sbjct: 293 KPMFTSCCPGWVRFI-KSQYPHLVSHLSSAKSPMQMFGAVMKSYFAESIGKRPEDIFSVA 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL--ANELATTTLQEEKDGILDW 299
+MPC KK E S FY E G+ D+DCV+T E ++ A+ L T + E D +
Sbjct: 352 IMPCVAKKGEISMELFYGEYAGH-DMDCVLTTREFVRMIKSAHILPQTLKETEPDKLF-- 408
Query: 300 PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-----IREAT 354
H+ ++ G +GG L A + P FK +R+ I EA+
Sbjct: 409 ----HDASGAGIIFG-ATGGVMEAALRTAYYAIMGENCPPDAFKVVRHSSQEETGIIEAS 463
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
FT + L +A+G N + LI ++ YDF+EIMACP GC+ GG Q ++
Sbjct: 464 FTLKENNLSVAVASGLANTRRLIDSIEAGEKHYDFVEIMACPGGCVGGGGQPIHDGFELA 523
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E L I +L EN +++LY + ++ K +L+T +
Sbjct: 524 FERGQNLYFIDSNLKLRYSHENEDIKNLYNNFFEKPNSHKAHSLLHTDH 572
>gi|223558018|gb|ACM91024.1| NADH:ubiquinone oxidoreductase subunit [uncultured bacterium URE4]
Length = 590
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 197/412 (47%), Gaps = 38/412 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+C+ C C+ + + + + K++R+ +N N KT V +A ++LG
Sbjct: 193 TNCVLCGQCVAVCPTGALAEV--DNTGKILRD------IANPNVKTCV-QVAPAVRVALG 243
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR---FLSGGG--- 182
+F + +V K+ K +G D V D + +++E E + R +L+G
Sbjct: 244 EEFGMPAGSIVTGKIAAALKAIGFDYVFDTDWSADLTIMEEGTEVIGRLKAYLAGDKNVK 303
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+ TS CP WV + EK + E + Y S KSPQ + G+ +KT+ A+K+G+ ++ V+
Sbjct: 304 IPVMTSCCPAWVNFYEKFYPE-LRDYPSTAKSPQGMFGATVKTYFADKIGIPRKNLVCVS 362
Query: 242 LMPCYDKKLEASRADFYNEELGYR---DVDCVITAVELEVLLANELATTTLQEEKDGILD 298
+MPC KK E R EELG DV+ IT EL L+ ++ D D
Sbjct: 363 VMPCVAKKYECER-----EELGVNGDPDVNYSITTRELARLI--KICNIDFNSLPDAEFD 415
Query: 299 WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTC 357
P E ++ +GG L A+ L P ++F+ +R D +REAT
Sbjct: 416 SPLGESTGAAVIF---GATGGVMEAALRTAVEVLTGETLPRIDFEEVRGLDGVREATIPV 472
Query: 358 -GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS--- 413
G L+ + G +N + +++++K PY F+E+MACP GC++G Q + AS
Sbjct: 473 PGVADLKVAVVYGLKNARMIMEQIKAGECPYHFVEVMACPGGCIDGAGQPYHHGDASIIR 532
Query: 414 PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ A+ L KS EN ++ +YK + G ++K H+L+T Y +
Sbjct: 533 ARHAAIYEADRRMPLRKS--HENPEVQAIYKEFYGEPCSEKSHHLLHTIYFD 582
>gi|357037998|ref|ZP_09099797.1| hydrogenase, Fe-only [Desulfotomaculum gibsoniae DSM 7213]
gi|355360554|gb|EHG08312.1| hydrogenase, Fe-only [Desulfotomaculum gibsoniae DSM 7213]
Length = 523
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 206/419 (49%), Gaps = 49/419 (11%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + IT++ ++V++ I++ N H +V+ A ++LG
Sbjct: 119 CINCGQCALWCPTAAITERDDTQKVLQAIQDPNKH----------VVVQTAPATRVALGE 168
Query: 131 KFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG---PLFT 186
+F L VA + KRLG D V D +++E E + R G P FT
Sbjct: 169 EFGLPPGTWVAGQQVAALKRLGFDGVFDTSFTADLTIMEEATELIKRITGGTNMPLPQFT 228
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV + E + + +LP++S KSPQQ++G+L+KT+ A+ + P +I+ V++MPC
Sbjct: 229 SCSPGWVKFCEYFYPD-LLPHMSSCKSPQQMLGALVKTYYAKAKNIAPENIFSVSIMPCT 287
Query: 247 DKKLEASR------ADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
KK E R A ++++E G RD+D V+T EL + ++++ + P
Sbjct: 288 AKKFEMQRPEMNSSAHYWHQE-GLRDIDAVLTTRELARM---------IKQQNIDLNKLP 337
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ----LCPGESP--VVEFKPLRNPD-I 350
++P L+ TG G V+ A+R + + P ++ P+R + +
Sbjct: 338 EQNYDP---LMGESTGGAIIFGATGGVMEAAVRTAYYFITEQQPPANLLTLTPVRGLEGV 394
Query: 351 REATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
+EA V T++ + +G N + +++ +++ P+ F+E M CP GC++GG Q R+
Sbjct: 395 KEAAVDVPGVGTVKVAVCHGMSNGRQVLEAVRKGNAPWHFVEFMCCPGGCISGGGQPRSA 454
Query: 410 KVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
S + + ++ A+++ R ENA + LY+ +L ++ + +L+T Y +
Sbjct: 455 VPPSDEVRMQRINSLYQADARAQRRESHENAEVLALYQNFLKHPMSELAEELLHTKYTD 513
>gi|403388946|ref|ZP_10931003.1| [Fe] hydrogenase [Clostridium sp. JC122]
Length = 566
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 196/407 (48%), Gaps = 38/407 (9%)
Query: 67 ISLTDCLACSGCITSAESVLITQ-QSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+ T C C C+ + +T+ +E++ +V+ + K +V +A
Sbjct: 189 INETKCTYCGQCVAVCPTGALTEVMDYEKIPRVVEDKE----------KFVVAQIAPAVR 238
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++L +F +S + + K+ K L + V D + +++E EF++RF P
Sbjct: 239 VALCEEFGVSSDIITTGKIVAALKMLNFNKVFDTNFSADLTIMEEAKEFINRFKEKNKLP 298
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L TS CP W+ +AE ++ + L YIS KSPQQ+ G++ K++L +K + ++ V++M
Sbjct: 299 LITSCCPAWIRFAEMNYKDN-LKYISSCKSPQQMFGAIAKSYLVDKYKIKKENMVVVSIM 357
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWPWD 302
PC KK EA R + DVD VIT EL L+ + + L+EE+ D P
Sbjct: 358 PCIAKKYEAKRKELKG------DVDIVITTRELAKLIRESSIDIINLKEEE---FDNPLG 408
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVT 361
ML GT SGG L A C ++FK +R D I+EAT
Sbjct: 409 VSTGAGMLF--GT-SGGVMEAALRTAYEWSCNKTLNELDFKDVRGLDGIKEATIELDGNK 465
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
+ + + +N + +++++K YDFIEIMACP GC++GG Q + S KE +
Sbjct: 466 IEVAVISSLKNARKVMEEIKNGICKYDFIEIMACPGGCIDGGGQ---PYIKSCKEKLEKR 522
Query: 422 ETILCDLAK----SEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
I+ + K + EN ++ LYK +L + D K +L+ +Y
Sbjct: 523 MKIIYEKDKVSKIRKSHENPIIKELYKDFL---NEDNIKKLLHVTYK 566
>gi|121534125|ref|ZP_01665950.1| hydrogenases, Fe-only [Thermosinus carboxydivorans Nor1]
gi|121307228|gb|EAX48145.1| hydrogenases, Fe-only [Thermosinus carboxydivorans Nor1]
Length = 574
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 188/374 (50%), Gaps = 43/374 (11%)
Query: 110 NENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVE 168
++ K +V+ A ++LG + +V K+ +RLG D V D +++E
Sbjct: 220 SDPAKHVVVQTAPAVRVALGEALGMGTGSIVTGKMVAALRRLGFDKVFDTDFTADLTIME 279
Query: 169 LENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA 227
+EFLDR GG P+ TS PGWV + E + + +L ++S KSPQQ+ G+L KT+ A
Sbjct: 280 EGSEFLDRLAKGGKLPMITSCSPGWVNFIELMYPD-LLDHLSTAKSPQQMFGALAKTYYA 338
Query: 228 EKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATT 287
E++G+ P I V++MPC KK EA R + GY+DVD V+T EL ++
Sbjct: 339 ERVGIDPKDIVSVSIMPCTAKKAEAVRPEMRAS--GYQDVDYVLTTRELARMI------- 389
Query: 288 TLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPG-ESPVV 340
++ +D+ + L TG+G G V+ A+R +L G E +
Sbjct: 390 -----REAGIDFAGLPEEEYDAPLGISTGAGVIFGATGGVMEAALRTVAELVTGKELECI 444
Query: 341 EFKPLRN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
+F +R I+EA GD+T++ +A+ N + L+ +++R Y FIEIMACP GC
Sbjct: 445 DFHNVRGLTGIKEAEVPVGDMTVKVAVAHTLANARMLLDQIRRGEADYHFIEIMACPGGC 504
Query: 400 LNGG-------AQIRNEKVASPKETALELETILCDLAKS--EPRENATLEHLYKAWLGGK 450
+ GG A++R +++ S E CD + EN ++ LY+ WLG
Sbjct: 505 IGGGGQPIPTCAEVRQQRIKSIYE---------CDSCSQFRKSHENPAIKELYETWLGTP 555
Query: 451 STDKGKHMLNTSYH 464
+K +L+T YH
Sbjct: 556 LGEKSHRLLHTHYH 569
>gi|402571795|ref|YP_006621138.1| hydrogenase, Fe-only [Desulfosporosinus meridiei DSM 13257]
gi|402252992|gb|AFQ43267.1| hydrogenase, Fe-only [Desulfosporosinus meridiei DSM 13257]
Length = 525
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 197/419 (47%), Gaps = 52/419 (12%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C CI S I+++ +++ KV KA ++ N T+V+ A + LG +
Sbjct: 114 CVNCGQCIQWCPSGAISER--DDINKVF------KALADPNV-TVVVQTAPATRIGLGEE 164
Query: 132 FALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLFTS 187
F + V K ++LG D+V D +++E E + R L P TS
Sbjct: 165 FGMPVGTNVQGKQVAALRKLGFDVVFDTNFTADLTIMEEGTELVKRVTGELHHPIPQMTS 224
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV + E + E I P +S KSPQQ+ G+LIKT+ AEK V P I+ V++MPC
Sbjct: 225 CCPGWVKFVEYFYPELI-PNLSSAKSPQQMEGALIKTYFAEKKEVDPKKIFSVSIMPCTA 283
Query: 248 KKLEASRADF------YNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWP 300
KK E R + N+ DVD V+T EL ++ + +L EE+
Sbjct: 284 KKFECQRPEMNSASKELNDSNVSPDVDVVLTTRELARMIKRAGIDFASLPEEE------- 336
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESP---VVEFKPLRN-PDI 350
+ L+ GTG+G G V+ A+R L G+ P + P+R +
Sbjct: 337 ------YDKLMGTGTGAGVIFGTTGGVMEAAVRSAYFLITGQQPPAALWNLTPVRGMQGV 390
Query: 351 REATFT---CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
+EA GDV + + +G N + ++ ++K P+ F+EIMACP GC GG Q R
Sbjct: 391 KEAAVNIPGVGDV--KVAVISGLANARKVMDQMKAGNAPWAFMEIMACPGGCEYGGGQPR 448
Query: 408 NEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
S ++ ++ AK++ R +N ++ +Y +L ++K + +L+T Y
Sbjct: 449 ASSPPSDEDRNRRAASLYNIDAKAKLRNSHDNPEIKQIYADFLTAPMSEKAEELLHTHY 507
>gi|414153988|ref|ZP_11410309.1| Iron hydrogenase 1 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454520|emb|CCO08213.1| Iron hydrogenase 1 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 518
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 203/424 (47%), Gaps = 50/424 (11%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + IT++ ++V++ + + N H +V+ A ++LG
Sbjct: 112 CVNCGQCTLWCPTAAITERDDIDKVVQALADKNIH----------VVVQTAPATRVALGE 161
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLFT 186
+F ++ V K K+LG D V D + ++ E E + R + P FT
Sbjct: 162 EFGMAPGTFVEGKQVAALKKLGFDAVFDTNFSADLTIFEEGTELIKRITGQIHEPLPQFT 221
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV + E + + +L ++S KSPQQ++G+LIKT+ A++ G++P I+ V++MPC
Sbjct: 222 SCSPGWVKFCEYYYPD-LLSHMSTCKSPQQMLGALIKTYYAKEKGINPEKIFSVSIMPCT 280
Query: 247 DKKLEASRADF-----YNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWP 300
KK EA+R + YN + RDVD V+T EL L+ ++ + +L +EK
Sbjct: 281 AKKFEAARPEMNSAGKYNGKPQMRDVDVVLTTRELARLIKSKGIDLNSLSDEK------- 333
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ----LCPGESP--VVEFKPLRN-PDI 350
+ L+ +G+G G V+ AIR + E P ++ P+R
Sbjct: 334 ------YDSLMGESSGAGLIFGATGGVMEAAIRSAYFLITKQEPPEALLNLTPIRGLKGC 387
Query: 351 REATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
+EA V T++ + +G N + +++ +++K P+ FIE M CP GC++GG Q R
Sbjct: 388 KEAAVDIPGVGTIKVAVVHGLSNARPILEAVRKKEAPWHFIEFMCCPGGCISGGGQPRTS 447
Query: 410 KVASPKETALELETILCDLA----KSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
S + + +I A K + EN + LY+ +L ++ +L+T Y +
Sbjct: 448 LPPSDQVRQARINSIYNADAHIYVKRKSHENKEVLALYEKFLENPNSHLAHELLHTHYTD 507
Query: 466 IPKN 469
K
Sbjct: 508 RSKT 511
>gi|160878248|ref|YP_001557216.1| hydrogenase, Fe-only [Clostridium phytofermentans ISDg]
gi|160426914|gb|ABX40477.1| hydrogenase, Fe-only [Clostridium phytofermentans ISDg]
Length = 567
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 171/354 (48%), Gaps = 40/354 (11%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+I+ T+C+ C C + IT +S ++V K I K +V+ +A
Sbjct: 183 KIAETNCVNCGQCAAVCPTAAITVKSDLKDVWKAIYNPK----------KRVVVQVAPAV 232
Query: 125 VLSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
++LG +F + + E V+ K+ +RLG D + D + +++E E L + +G
Sbjct: 233 RVALGEEFHMKAGENVIGKIVAALRRLGFDAIFDTSVGADLTIMEESKELLKKLEAGENK 292
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
PLFTS CPGW+ YAE H E +LPYIS KSP ++ G++IK H V
Sbjct: 293 YPLFTSCCPGWIRYAETKHKE-LLPYISTCKSPMEMFGAVIKEHFKGLDSTEGVETVSVA 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EASR +F ++ DVD VIT +EL V + E+ +E + D P+
Sbjct: 352 IMPCSAKKYEASREEFKRNDIP--DVDYVITTIEL-VKMIKEIGIQ-FEEIEPEAPDMPF 407
Query: 302 DEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPV----VEFKPLRNPDIREATFT 356
L +G G G V A+R++ +SP +EF LR E
Sbjct: 408 S--------LYSGAGVIFGVTGGVTEAAVRRVVADKSPKALKDIEFLGLRG---MEGVKV 456
Query: 357 CG-----DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
C + +R + +G N + LI+K++ +DF+E+MACP GC+ G Q
Sbjct: 457 CELQVEENSIVRIGVVSGLANAEALIEKIESGEEHFDFVEVMACPGGCIAGAGQ 510
>gi|435853146|ref|YP_007314465.1| hydrogenase, Fe-only [Halobacteroides halobius DSM 5150]
gi|433669557|gb|AGB40372.1| hydrogenase, Fe-only [Halobacteroides halobius DSM 5150]
Length = 606
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 194/420 (46%), Gaps = 47/420 (11%)
Query: 70 TDCLACSGCI-TSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C+ C CI L T+ ++V + +++ + H +V+ A +++
Sbjct: 187 TPCITCGQCILVCPTGALHTKNDKQQVWEALKDPDKH----------VVIQTAPAIRVTI 236
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + V +L KRLG D V D ++E +E ++R SG P FT
Sbjct: 237 GEIFDMDVGSLVTGQLVAALKRLGFDKVFDDCFGADVVVMEEGHELMERLESGKDLPQFT 296
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + E + +F L +S KSPQQV GSL+KT+ AE+ G+ P +I+ V++MPC
Sbjct: 297 SCCPGWVKFCENFYSDF-LDNLSSCKSPQQVFGSLVKTYYAEQAGIDPENIFSVSVMPCV 355
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EASR + N+ RDVD +T EL E++ L TL EE+ +D
Sbjct: 356 AKKYEASRPEM-NDSGQDRDVDVNLTTRELGELIKEAGLDLKTLPEEE-------YD--- 404
Query: 306 PHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGD- 359
H M +G G +GG L ++ E VE + +R +++E GD
Sbjct: 405 -HPMGYASGAGVIFGSTGGVCEATLRTVYEKMTGEELEDVELEQVRGKELKEGIVDLGDG 463
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
+R + G N + L+ +++ YDFIE+MACP+ G + V S +
Sbjct: 464 REIRAAVVRGTGNARKLLDQIQSGEKDYDFIEVMACPN---GGCVGGGGQPVYSGYDRWT 520
Query: 420 ELETILCDLAKSEPRENATLEH-----------LYKAWLGGKSTDKGKHMLNTSYHNIPK 468
++ A+ + + EH LY +LG DK + +L+T Y N K
Sbjct: 521 KMGEHYVKRAEGLFKADQQKEHRTAHTNPYVKKLYDEFLGKPHGDKSQDLLHTKYVNRKK 580
>gi|385800509|ref|YP_005836913.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Halanaerobium praevalens DSM 2228]
gi|309389873|gb|ADO77753.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Halanaerobium praevalens DSM 2228]
Length = 573
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 188/410 (45%), Gaps = 40/410 (9%)
Query: 71 DCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
+C C C T IT+ I E + A+ ++ + +++ A +LG
Sbjct: 193 NCANCGQCATVCPVGAITE---------INEIDKVWAALEDDDRHVIVQTAPSIQATLGE 243
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTS 187
+F + +V K+ KR+G D V A +++E +EFL + L+G G P TS
Sbjct: 244 EFGMETGTIVTGKMVAALKRMGFDKVFSTDFAADLTILEEGSEFLKK-LNGEGELPHITS 302
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV +AE + + +L ++S KSP Q+ +L KT+ ++ GV P IY V +MPC
Sbjct: 303 CCPGWVKFAEHNFPD-LLKHLSSAKSPMQMFSALGKTYYPDQTGVDPEKIYTVAVMPCTA 361
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK E R + + ++D D V+T E ++ +E P ++ +
Sbjct: 362 KKFEKDREEINGSD--FKDTDAVLTTREFARMI---------KEMGINFNKLPEEDFD-- 408
Query: 308 RMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-----IREATFTCGD 359
L+ TG+G G V A+R + + +PL D I +A GD
Sbjct: 409 -ALMGKSTGAGTIFGTTGGVAEAAVRTV----KEKLTGEPLERLDLGFRGINKAEVRIGD 463
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
++ IANG N +++++++ DFIE+MACP GC+ GG Q R ++
Sbjct: 464 RLIKVGIANGLGNASKILEQVRKGESDLDFIEVMACPHGCVGGGGQPRPATNEKKEKRGS 523
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
L I + EN + LY+ +LG + H+L+T Y PKN
Sbjct: 524 GLSNIDDSSKIRKSHENPQIIKLYEEFLGEPLGGESHHLLHTKYKARPKN 573
>gi|168213257|ref|ZP_02638882.1| iron hydrogenase [Clostridium perfringens CPE str. F4969]
gi|168216689|ref|ZP_02642314.1| iron hydrogenase [Clostridium perfringens NCTC 8239]
gi|169347026|ref|ZP_02865968.1| iron hydrogenase [Clostridium perfringens C str. JGS1495]
gi|422347408|ref|ZP_16428320.1| hydrogenase, Fe-only [Clostridium perfringens WAL-14572]
gi|422875292|ref|ZP_16921777.1| iron hydrogenase [Clostridium perfringens F262]
gi|169296709|gb|EDS78838.1| iron hydrogenase [Clostridium perfringens C str. JGS1495]
gi|170715282|gb|EDT27464.1| iron hydrogenase [Clostridium perfringens CPE str. F4969]
gi|182381184|gb|EDT78663.1| iron hydrogenase [Clostridium perfringens NCTC 8239]
gi|373224706|gb|EHP47043.1| hydrogenase, Fe-only [Clostridium perfringens WAL-14572]
gi|380303822|gb|EIA16118.1| iron hydrogenase [Clostridium perfringens F262]
Length = 572
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 187/402 (46%), Gaps = 27/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C CI + ++++SH E ++ + N+ K +++++A S+G
Sbjct: 188 TNCLLCGQCIAACPVDALSEKSHIERVQ---------EALNDPEKHVIVAMAPAVRTSMG 238
Query: 130 AKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + + Q V KL + LG D V D+ +++E E ++R + G P+ TS
Sbjct: 239 ELFKMGYGQDVTGKLYTALRELGFDKVFDINFGADMTIMEEATELIERIKNNGPFPMLTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV E E + +S KSPQQ+ G+ KT+ + + P ++ VT+MPC
Sbjct: 299 CCPSWVREVENYFPELV-ENLSSAKSPQQIFGAASKTYYPQVADIDPKKVFTVTVMPCTS 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + NE G R++D VIT EL ++ + A + +DG +D E+
Sbjct: 358 KKFEADRPEMENE--GIRNIDAVITTRELARMI--KAAKIDFAKLEDGEVDPAMGEYTGA 413
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFCI 366
++ +GG L A + V+++ +R I+EA + +
Sbjct: 414 GVIF---GATGGVMEAALRTAKDFMENDNLDNVDYEAVRGLAGIKEAEVEIAGNEYKLAV 470
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILC 426
+G N+ L++ K Y FIE+MACP GC+NGG Q S K E+ +
Sbjct: 471 VSGAANVFELVKSGKIN--DYHFIEVMACPGGCVNGGGQPHISAEDSDKMDIREVRASVL 528
Query: 427 -----DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L K + +N+ L +Y+ ++G + +L+ Y
Sbjct: 529 YNQDKNLEKRKSHQNSALLKMYENYMGKPGHGRAHELLHMKY 570
>gi|376261994|ref|YP_005148714.1| hydrogenase, Fe-only [Clostridium sp. BNL1100]
gi|373945988|gb|AEY66909.1| hydrogenase, Fe-only [Clostridium sp. BNL1100]
Length = 562
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 193/410 (47%), Gaps = 41/410 (10%)
Query: 49 GAYIQETNGREEKLKKVEISLTDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKA 107
G+ +Q T + L++V DC+ C C + L+ ++ + A++A
Sbjct: 170 GSNLQVTTAFNKSLQEV-----DCVNCGQCRVVCPTGALMIKKDI---------DRAYEA 215
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSL 166
N+N K ++ +A +++G F L ++ + K+ ++LG D V D + ++
Sbjct: 216 LQNKN-KRVIAQIAPAVRVAIGEDFGLQPGEISMGKIVAALRKLGFDQVFDTAVGADLTV 274
Query: 167 VELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
+E E +DR PLF+S CP W YAE+ H E ++ +S SPQQ+ G++IK
Sbjct: 275 IEEAEELMDRIQRKEKLPLFSSCCPAWFKYAEQKHPE-LMENVSSCLSPQQMFGAVIKEQ 333
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA 285
++ + + +MPC KK EASR + N G R VD VIT EL +++
Sbjct: 334 FKKEQSSNEKENIVIAIMPCTAKKYEASRPE--NTINGERQVDMVITTQELAIMIQEN-- 389
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVV 340
E +D +D P+ +G G SGG + VL + ++ +
Sbjct: 390 GIVFNELEDEAIDMPFG--------FTSGAGVIFGVSGGVSEAVLRYYYKERNASTLKGI 441
Query: 341 EFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
+ +R + ++EAT T+R + +G +N + LI+K+KR +DFIE+MACP GC
Sbjct: 442 SYSGVRGMEGVKEATAEIDGRTVRIGVVHGLKNAEKLIRKIKRGEEKFDFIEVMACPGGC 501
Query: 400 LNGGAQ--IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWL 447
+ G Q +NE V K A + + L +N T++ LY L
Sbjct: 502 IGGAGQPIPQNENVR--KLRAKGIYKVDKSLPIKRSDDNPTIDALYNGIL 549
>gi|255659119|ref|ZP_05404528.1| ferredoxin hydrogenase [Mitsuokella multacida DSM 20544]
gi|260848564|gb|EEX68571.1| ferredoxin hydrogenase [Mitsuokella multacida DSM 20544]
Length = 589
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 196/412 (47%), Gaps = 40/412 (9%)
Query: 70 TDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
TDC+ C C + L+ + E+V+ +++ H +++ +A +SL
Sbjct: 201 TDCILCGQCSLVCPTGALVEKDDTEKVLDALQDPKKH----------VIVQVAPSVRVSL 250
Query: 129 GAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + +V ++ LG D V D +++E EFLDR GG P+ T
Sbjct: 251 GDAFGMEPGAIVTGQMVTALHLLGFDKVFDTNFGADLTIMEEGTEFLDRLQHGGVLPMMT 310
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV Y EK + + LP++S KSP + G++ KT+ + G+ I V++MPC
Sbjct: 311 SCCPGWVYYVEKHYSD-CLPHLSSTKSPMSIFGAVAKTYYPKVAGIDVKDIVTVSVMPCT 369
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA+R + + G DVD V+T EL L+ + + + + D P
Sbjct: 370 AKKFEAARPELGRD--GRPDVDIVLTTRELIKLI--KYVGLSFGQLPETEFDSPL----- 420
Query: 307 HRMLLVNGTGSG-----GYAHNVLSHAIRQLC---PGES-PVVEFKPLRN-PDIREATFT 356
GT SG G V+ A+R +C G++ ++F+ R I+E T
Sbjct: 421 -------GTASGAGAIFGTTGGVMEAALRTVCDKLTGKTLERLDFQEARGFKGIKECTLE 473
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G TL IA+ +N + L++++++ PYDFIE+MACP GC+ GG Q A K+
Sbjct: 474 LGGRTLHIAIAHTLKNAEILMEQVRKGISPYDFIEVMACPGGCIGGGGQPIGTTNAVKKK 533
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
L I L + EN L+ LY+ +LG K +L+T Y +PK
Sbjct: 534 RMQALYEIDRSLPVRKSHENPELQVLYRDFLGEPGEGKAHELLHTGYRAVPK 585
>gi|397904027|ref|ZP_10504958.1| Periplasmic [Fe] hydrogenase large subunit [Caloramator australicus
RC3]
gi|343178773|emb|CCC57857.1| Periplasmic [Fe] hydrogenase large subunit [Caloramator australicus
RC3]
Length = 577
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 189/403 (46%), Gaps = 27/403 (6%)
Query: 70 TDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C+ C CI + L +++ +EV I SN K +V+ A ++L
Sbjct: 187 TVCINCGQCIMACPVGALHEKENIKEVWMAI---------SNPE-KFVVVQTAPAVRVAL 236
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F + +V K+ +RLG D V D +++E E L+R G PL T
Sbjct: 237 GEEFGMPIGTRVTGKMVAALRRLGFDKVFDTDFGADLTIMEEGTELLNRLNKGERLPLMT 296
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + E + E + +S KSP ++ G+LIKT+ AEK+G+ P +I V++MPC
Sbjct: 297 SCCPGWVKFVEHYYPE-MTENLSTCKSPSEMEGALIKTYFAEKMGIDPKNIVTVSIMPCV 355
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R + + G +DVD V+T EL ++ A D D P+ E
Sbjct: 356 GKKFEGQREELSHN--GLQDVDYVLTTRELAQMIKE--AGIDFVNLPDEEFDNPFGESTG 411
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ +GG L + E +E +R + I+EA ++
Sbjct: 412 AGVIF---GATGGVTEAALRTIYEIVTGKELENIEITAVRGVEGIKEAEIELNGKVVKAA 468
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKETALELETI 424
IA+G N + +++ +K YDFIE+MACP GC+ GG Q I + K + +E
Sbjct: 469 IAHGLANARRVLEMVKSGEKHYDFIEVMACPGGCVTGGGQPIVDAKTRERVDVRVERAKA 528
Query: 425 LCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ + + P +N + LY+ +LG ++ K +L+T Y
Sbjct: 529 IYEEDRHLPIRKSHKNPYVIRLYEEFLGEPNSHKSHELLHTHY 571
>gi|333997422|ref|YP_004530034.1| iron hydrogenase 1 [Treponema primitia ZAS-2]
gi|299483517|gb|ADJ19598.1| putative iron only hydrogenase large subunit C-terminal domain
[Treponema primitia ZAS-2]
gi|333741284|gb|AEF86774.1| iron hydrogenase 1 ([Fe] hydrogenase) (Fe-onlyhydrogenase) (CpI)
[Treponema primitia ZAS-2]
gi|342308753|gb|AEL20849.1| HydA1 [Treponema primitia ZAS-2]
Length = 454
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 168/339 (49%), Gaps = 30/339 (8%)
Query: 141 AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKS 199
K+ +RLG V D + +++E E + R G P+FTS CPGWV Y E +
Sbjct: 131 GKMAAGLRRLGFKKVYDTNFSADLTIMEEGTELVKRVTEKGVLPMFTSCCPGWVRYMENN 190
Query: 200 HGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN 259
H E + ++S KSPQQ+ G++ KT+ A+ GV + +Y+V++MPC K EA+RA+ +
Sbjct: 191 HPE-LTKHLSSCKSPQQMAGAVFKTYGAKLDGVKGAKVYNVSVMPCTCKTFEAARAEMNS 249
Query: 260 EELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG 318
G++D+D VIT EL LL + + TL +E+ D P E+ TG+G
Sbjct: 250 S--GWQDIDVVITTRELGYLLKYKGIDLATLPDEE---FDMPLGEY----------TGAG 294
Query: 319 ---GYAHNVLSHAIRQ----LCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIANGF 370
G V+ AIR + E V+ +R D R A GD+TL+ +
Sbjct: 295 AIFGVTGGVMEAAIRTGYTLITGKELKDVDINAVRGSDGFRRAEIKAGDLTLKVGVVTNL 354
Query: 371 RNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAK 430
+NI +I++L+ L F+E+M CP GC++GG Q + E D K
Sbjct: 355 KNIDPVIEQLQAGTLDAHFVEVMTCPEGCISGGGQPKLLSDTDVPEAYQSRRNATYDHDK 414
Query: 431 SEPR----ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ P+ E+ ++ +Y +L + K +L+TSY +
Sbjct: 415 ALPKRKSHESGAIKKIYAEFLEKPNGHKSHELLHTSYKS 453
>gi|139438951|ref|ZP_01772411.1| Hypothetical protein COLAER_01417 [Collinsella aerofaciens ATCC
25986]
gi|133775662|gb|EBA39482.1| hydrogenase, Fe-only [Collinsella aerofaciens ATCC 25986]
Length = 603
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 207/428 (48%), Gaps = 60/428 (14%)
Query: 64 KVEISLTDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI 122
+ I TDC+AC CIT + L + E V I + + K +++ +A
Sbjct: 199 RAPIGKTDCVACGQCITHCPTGALRERDDTETVFDAIADPD----------KIVLVQIAP 248
Query: 123 QPVLSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL--- 178
+ G + +S E+ V +L +R+G + V D + +++E +E L+R
Sbjct: 249 AVRSAWGEELGISREEATVERLACALRRVGFEYVFDTDFSADLTIMEEGSELLERLGKAA 308
Query: 179 -----SGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
S G P+FTS CPGWV + + + EF+ +S KSPQQ+ G++ KT+ A+ LGV
Sbjct: 309 KGEGDSRGWPMFTSCCPGWVRFVKARYPEFV-DRLSTSKSPQQMFGAIAKTYYAKVLGVE 367
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEE 292
P ++ V++MPC KK E + E+ G DVD +T E+ ++ A+ ++ TL EE
Sbjct: 368 PERLFVVSVMPCTAKKAECALPSMMGED-GAPDVDVALTVREMVRMIRASHVSVDTLVEE 426
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVEFKPLR 346
LD P L GTG+G G V+ A+R L G++P +F
Sbjct: 427 P---LDTP----------LGFGTGAGVIFGATGGVMEAAVRSAYYLVTGKNPDADF---- 469
Query: 347 NPDIR------EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCL 400
D+R EA +R +A+G N L+ ++ R+ YDF+E+MACP GC+
Sbjct: 470 FTDVRGLEGWKEAVADIDGTKVRVAVAHGLGNAARLLDAIRDGRVRYDFVEVMACPGGCV 529
Query: 401 NGGAQIRNEKVASPKETALELETILCDL-AKSEPR---ENATLEHLYKAWLGGKSTDKGK 456
GG Q + E A E +L L AK++ R EN ++ Y+ +LG + +
Sbjct: 530 GGGGQ----PIHDGCELAAERGQVLWSLDAKADIRFSHENPDVQACYREFLGAPLSPLAE 585
Query: 457 HMLNTSYH 464
+L+T +H
Sbjct: 586 ELLHTDHH 593
>gi|110803368|ref|YP_699606.1| iron hydrogenase [Clostridium perfringens SM101]
gi|110683869|gb|ABG87239.1| iron hydrogenase [Clostridium perfringens SM101]
Length = 572
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 187/402 (46%), Gaps = 27/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C C+ + ++++SH E ++ + N+ K +++++A S+G
Sbjct: 188 TNCLLCGQCVAACPVDALSEKSHIERVQ---------DALNDPEKHVIVAIAPAVRTSMG 238
Query: 130 AKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + + Q V KL ++LG D V D+ +++E E ++R + G P+ TS
Sbjct: 239 ELFKMGYGQDVTGKLYTALRKLGFDKVFDINFGADMTIMEEATELIERIKNNGPFPMLTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV E E + +S KSPQQ+ GS KT+ + + P ++ VT+MPC
Sbjct: 299 CCPSWVREVENYFPELV-ENLSTAKSPQQIFGSASKTYYPQVADIDPKKVFTVTVMPCTS 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + NE G R++D VIT EL ++ + A + +D +D E+
Sbjct: 358 KKFEADRPEMENE--GIRNIDAVITTRELARMI--KAAKIDFAKLEDSEVDPAMGEYTGA 413
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFCI 366
++ +GG L A + V+++ +R I+EA + +
Sbjct: 414 GVIF---GATGGVMEAALRTAKDFMENDNLDNVDYEAVRGLAGIKEAEVEIAGNEYKLAV 470
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILC 426
NG N+ L++ K Y FIE+MACP GC+NGG Q S K E+ +
Sbjct: 471 VNGAANVFELVKSGKIN--DYHFIEVMACPGGCVNGGGQPHISAEDSDKIDIREVRASVL 528
Query: 427 -----DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L K + +N+ L +Y+ ++G + +L+ Y
Sbjct: 529 YNQDKNLEKRKSHQNSALLKMYENYMGKPGHGRAHELLHMKY 570
>gi|251779532|ref|ZP_04822452.1| hydrogenase, Fe only [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243083847|gb|EES49737.1| hydrogenase, Fe only [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 565
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 185/408 (45%), Gaps = 42/408 (10%)
Query: 70 TDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
TDC+ C C + ++ + + V K + + +V +A ++L
Sbjct: 187 TDCVNCGQCANVCPTGAIVVKNDVKPVWKALYNPK----------QRVVAQVAPAVRVAL 236
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLF 185
G +F + E V+ K+ ++LG D + D + +++E NEFL + SG PLF
Sbjct: 237 GEEFGVKPGENVMDKIVAAMRKLGFDEIYDTSLTADMTIIEESNEFLQKLESGDDKLPLF 296
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CP WV Y E H E ++ Y+S KSP Q+ GS+IK + E + V +MPC
Sbjct: 297 TSCCPAWVRYVETKHPE-LMKYVSTCKSPMQMFGSVIKEYFKENDSLEEKETISVAIMPC 355
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA+R +F G +D+D VIT EL + NE + E + D P+
Sbjct: 356 TAKKAEAAREEFIRN--GIKDIDYVITTTEL-CKMINEAGLQFDKIEPES-SDMPFS--- 408
Query: 306 PHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---IREATFTC 357
L +G G +GG V+ + +EF +R D I E F
Sbjct: 409 -----LYSGAGVIFGVTGGVTEAVIRGVVEDKSSKALKEIEFIGIRGMDGVKICEVPF-- 461
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
G+ LR + +G N +NLI K++ +DF+E+MACP GC+ G Q + K + KE
Sbjct: 462 GEKNLRIGVVSGLANAENLIDKIQSGEEHFDFVEVMACPGGCIAGAGQPFSLKEGN-KER 520
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
A L + +EN L LY L ++ K +L+ Y +
Sbjct: 521 AKGLYKVDKVTQIKRSQENPVLISLYNGLL----KERSKELLHVHYEH 564
>gi|357039139|ref|ZP_09100934.1| hydrogenase, Fe-only [Desulfotomaculum gibsoniae DSM 7213]
gi|355358603|gb|EHG06369.1| hydrogenase, Fe-only [Desulfotomaculum gibsoniae DSM 7213]
Length = 572
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 191/402 (47%), Gaps = 29/402 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
+ C C C+ + +T+ H ++V + I N+ K +V+ A ++L
Sbjct: 186 SSCTYCGQCVMVCPTAALTEAFHCDKVWEAI----------NDPDKYVVVQTAPAIRVAL 235
Query: 129 GAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + +V K+ KR+G D V D +++E +E + R + P+ T
Sbjct: 236 GELFGMEPGTIVTGKMVTALKRMGFDAVFDTNFGADLTIMEEASELIYRLKNNKTLPILT 295
Query: 187 SECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
+ CP WV + E E I +P S KSP ++G++ KT+ AEK G+ P +I V++MPC
Sbjct: 296 NCCPAWVKFIEHQFPELIHVP--STCKSPHIMLGTIAKTYYAEKKGLDPDNIVVVSVMPC 353
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA R + +E + +VD VIT EL ++ A + D D P E
Sbjct: 354 IAKKAEAKRPELTKDE--HNNVDIVITTRELGAMIKE--AGIEFVKLPDSKFDSPLGEAT 409
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRF 364
++ GT +GG L A + VEF+ LR + +R AT GD L+
Sbjct: 410 GASVIF--GT-AGGVIEAALRTASEWMTGKPLDKVEFEELRGMEGVRRATVKIGDQELKI 466
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETALEL 421
IA+G N +++++ ++ + Y IEIMACP GC+ GG Q N++V + A+
Sbjct: 467 GIASGLGNARHILEDIRDGKANYHAIEIMACPGGCIAGGGQPYHHGNDEVIKKRREAIYA 526
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E + KS EN + LYK +LG + +L+T +
Sbjct: 527 EDRNKKVRKS--HENKEILELYKNYLGEPFGKRAHELLHTHF 566
>gi|168205175|ref|ZP_02631180.1| iron hydrogenase [Clostridium perfringens E str. JGS1987]
gi|168210350|ref|ZP_02635975.1| iron hydrogenase [Clostridium perfringens B str. ATCC 3626]
gi|170663259|gb|EDT15942.1| iron hydrogenase [Clostridium perfringens E str. JGS1987]
gi|170711592|gb|EDT23774.1| iron hydrogenase [Clostridium perfringens B str. ATCC 3626]
Length = 572
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 187/402 (46%), Gaps = 27/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C CI + ++++SH E ++ + N+ K +++++A S+G
Sbjct: 188 TNCLLCGQCIAACPVDALSEKSHIERVQ---------DALNDPEKHVIVAMAPAVRTSMG 238
Query: 130 AKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + + Q V KL + LG D V D+ +++E E ++R + G P+ TS
Sbjct: 239 ELFKMGYGQDVTGKLYTALRELGFDKVFDINFGADMTIMEEATELIERIKNNGPFPMLTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV E E + +S KSPQQ+ G+ KT+ + + P ++ VT+MPC
Sbjct: 299 CCPSWVREVENYFPELV-ENLSSAKSPQQIFGAASKTYYPQVADIDPKKVFTVTVMPCTS 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + NE G R++D VIT EL ++ + A + +DG +D E+
Sbjct: 358 KKFEADRPEMENE--GIRNIDAVITTRELARMI--KAAKIDFAKLEDGEVDPAMGEYTGA 413
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFCI 366
++ +GG L A + V+++ +R I+EA + +
Sbjct: 414 GVIF---GATGGVMEAALRTAKDFMENDNLDNVDYEAVRGLAGIKEAEVEIAGNEYKLAV 470
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILC 426
+G N+ L++ K Y FIE+MACP GC+NGG Q S K E+ +
Sbjct: 471 VSGAANVFELVKSGKIN--DYHFIEVMACPGGCVNGGGQPHISAEDSDKMDIREVRASVL 528
Query: 427 -----DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L K + +N+ L +Y+ ++G + +L+ Y
Sbjct: 529 YNQDKNLEKRKSHQNSALLKMYENYMGKPGHGRAHELLHMKY 570
>gi|422350074|ref|ZP_16430961.1| hydrogenase, Fe-only [Sutterella wadsworthensis 2_1_59BFAA]
gi|404657669|gb|EKB30553.1| hydrogenase, Fe-only [Sutterella wadsworthensis 2_1_59BFAA]
Length = 683
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 188/418 (44%), Gaps = 47/418 (11%)
Query: 72 CLACSGCI-TSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C CI + L + S + V K + + + K ++ S + ++LG
Sbjct: 58 CIHCGQCIPVCPTNSLQIKSSCDAVRKAVADPD----------KIVIFSTSPSVRVALGD 107
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTS 187
F ++ V ++ +RLG D VLD A ++ E E ++R + GPL FTS
Sbjct: 108 AFGMADGAFVEGQMVELLRRLGGDYVLDTNFAADLTICEEAAELIERITNAKGPLPQFTS 167
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV Y E H E I P+IS KSP + G +KT+ A+K+ + P I HV + PC
Sbjct: 168 CCPAWVRYCETFHPEMI-PHISSAKSPIGMQGPTVKTYFAKKMNLDPKRIVHVAVTPCTA 226
Query: 248 KKLEASRADFYNE-----ELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E R + + RD D VIT VEL + A E +G D
Sbjct: 227 KKAEILREEMNAAGRLLGDPAMRDTDYVITTVELADWA--KAARINFAELPEGAFDRLMG 284
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRN-PDIREATFTCGD 359
E + ++ N +GG L A R L +P + P+R D++EAT T
Sbjct: 285 EGSGAGVIFGN---TGGVMEAALRTAYRHLTGETAPAELYHLTPVRGLQDVKEATVTIAG 341
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRL--PYDFIEIMACPSGCLNGGAQ----------IR 407
+ + G + I++L PY F+E+M+CP GC++GG Q +R
Sbjct: 342 NDINVAVIYGTASAGEFIRRLNASETDKPYHFVEVMSCPGGCISGGGQPSAFGNKADVLR 401
Query: 408 NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
++AS + E++ D EN ++ LY+ + G ++ + +L+T+Y +
Sbjct: 402 EARIASLYKRDEEMDCRTSD-------ENEEIKALYRDFYGEPLSELAEELLHTNYTD 452
>gi|182625781|ref|ZP_02953548.1| iron hydrogenase [Clostridium perfringens D str. JGS1721]
gi|177908937|gb|EDT71424.1| iron hydrogenase [Clostridium perfringens D str. JGS1721]
Length = 572
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 187/402 (46%), Gaps = 27/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C CI + ++++SH E ++ + N+ K +++++A S+G
Sbjct: 188 TNCLLCGQCIAACPVDALSEKSHIERVQ---------DALNDPEKHVIVAMAPAVRTSMG 238
Query: 130 AKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + + Q V KL + LG D V D+ +++E E ++R + G P+ TS
Sbjct: 239 ELFKMGYGQDVTGKLYTALRELGFDKVFDINFGADMTIMEEATELIERIKNNGPFPMLTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV E E + +S KSPQQ+ G+ KT+ + + P ++ VT+MPC
Sbjct: 299 CCPSWVREVENYFPELV-ENLSTAKSPQQIFGAASKTYYPQVADIDPKKVFTVTVMPCTS 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + NE G R++D VIT EL ++ + A + +DG +D E+
Sbjct: 358 KKFEADRPEMENE--GIRNIDAVITTRELARMI--KAAKIDFAKLEDGEVDPAMGEYTGA 413
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFCI 366
++ +GG L A + V+++ +R I+EA + +
Sbjct: 414 GVIF---GATGGVMEAALRTAKDFMENDNLDNVDYEAVRGLAGIKEAEVEIAGNEYKLAV 470
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILC 426
+G N+ L++ K Y FIE+MACP GC+NGG Q S K E+ +
Sbjct: 471 VSGAANVFELVKSGKIN--DYHFIEVMACPGGCVNGGGQPHISAEDSDKMDIREVRASVL 528
Query: 427 -----DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L K + +N+ L +Y+ ++G + +L+ Y
Sbjct: 529 YNQDKNLEKRKSHQNSALLKMYENYMGKPGHGRAHELLHMKY 570
>gi|366165668|ref|ZP_09465423.1| hydrogenase, Fe-only [Acetivibrio cellulolyticus CD2]
Length = 566
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 186/391 (47%), Gaps = 33/391 (8%)
Query: 67 ISLTDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+ ++C+ C C + ++ + + ++V K I +NN + + +A
Sbjct: 186 IAQSNCVGCGQCALACPTGAIVIKNNTDKVWKEIYDNNTK----------VTVQIAPAVR 235
Query: 126 LSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
++LG + L+ E + ++ +R+G D + D +++E E L R G
Sbjct: 236 VALGKELGLNDGENAIGRIVAALRRMGFDEIYDTSTGADLTVLEESAELLKRIKDGNNDM 295
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CP WV + EK + E +LP +S +SP Q+ S+IK E+ + HV +
Sbjct: 296 PLFTSCCPAWVNFCEKHYPE-LLPNVSTCRSPMQMFASVIK----EQNSNSSRRVVHVAV 350
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPW 301
MPC KK EA+R +F + G +VD VI+ EL +++ + + T L+ E +D P+
Sbjct: 351 MPCTAKKFEAAREEF--KVNGVPNVDYVISTQELIQMIKESGIIFTDLEPEA---IDMPF 405
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDV 360
H ++ +GG VL + + + +R + ++EA+ GD
Sbjct: 406 GTHTGAGVIF---GVTGGVTEGVLRRVVSDKSATSFMTLSYAGIRGLEGVKEASLMYGDR 462
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKETAL 419
L+ + +G +N LI+K+K YD +E+MACP GC+NGG Q + + + L
Sbjct: 463 KLKIAVVSGLKNASKLIEKIKAGE-HYDLVEVMACPGGCINGGGQPFVSSEERERRGKGL 521
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGK 450
LC + SE EN + LY L G+
Sbjct: 522 YSADKLCSIKSSE--ENPLMMSLYNGVLKGR 550
>gi|386346388|ref|YP_006044637.1| hydrogenase, Fe-only [Spirochaeta thermophila DSM 6578]
gi|339411355|gb|AEJ60920.1| hydrogenase, Fe-only [Spirochaeta thermophila DSM 6578]
Length = 597
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 202/409 (49%), Gaps = 43/409 (10%)
Query: 72 CLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+AC C+ L +++ E V + + + K +V +A ++LG
Sbjct: 194 CVACGQCVVYCPVGALYEKEAVERVWEALADPE----------KVVVAQIAPAVRVALGE 243
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F + E V+ K+ +RLGVD V D + +++E EFL R G PL TS
Sbjct: 244 EFGMKPGELVIGKIYAALRRLGVDYVFDTNFSADLTIMEEGTEFLHRLEKGERLPLITSC 303
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGW+ +AE + + +LP++S KSPQQ+MG+++KT+ A+ G+ PS I +++MPC K
Sbjct: 304 SPGWIKFAETYYPD-LLPHLSTCKSPQQMMGAVVKTYFAQAKGIPPSRIVSLSVMPCTAK 362
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWDEHNPH 307
K EA R + + G+ DVD V+T EL ++ + L+EE P
Sbjct: 363 KFEAQREEMRDS--GFWDVDIVLTTRELARMIRQAGIRFDQLKEE-------------PA 407
Query: 308 RMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRN-PDIREATFTCGD 359
+L + +G+ G V+ A+R +L G+S P VEF +R ++EA
Sbjct: 408 DPVLSSYSGAATIFGATGGVMEAALRTAYELKTGKSLPRVEFAQVRGVKGVKEAVIELNG 467
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKR-----LPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
+R +A+G N + ++ +++ + LPY FIE+MACP GC+ GG Q +
Sbjct: 468 TQIRVAVAHGLSNARKVLDRVREAKERGEPLPYHFIEVMACPGGCVGGGGQPLPSPLKKR 527
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+E + L L+ + EN + LY+ +L + + +L+T Y
Sbjct: 528 EERLMGLYAEDGALSVRKSHENPEVRALYEHFLKEPNGELPHTLLHTHY 576
>gi|18311328|ref|NP_563262.1| iron hydrogenase [Clostridium perfringens str. 13]
gi|4239897|dbj|BAA74738.1| hydrogenase [Clostridium perfringens]
gi|18146011|dbj|BAB82052.1| hydrogenase [Clostridium perfringens str. 13]
Length = 572
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 187/402 (46%), Gaps = 27/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C CI + ++++SH E ++ + N+ K +++++A S+G
Sbjct: 188 TNCLLCGQCIAACPVDALSEKSHIERVQ---------DALNDPEKHVIVAMAPAVRTSMG 238
Query: 130 AKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + + Q V KL + LG D V D+ +++E E ++R + G P+ TS
Sbjct: 239 ELFKMGYGQDVTGKLYTALRELGFDKVFDINFGADMTIMEEATELIERIKNNGPFPMLTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV E E + +S KSPQQ+ G+ KT+ + + P ++ VT+MPC
Sbjct: 299 CCPSWVREVENYFPELV-ENLSSAKSPQQIFGAASKTYYPQVADIDPKKVFTVTVMPCTS 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + NE G R++D VIT EL ++ + A + +DG +D E+
Sbjct: 358 KKFEADRPEMENE--GIRNIDAVITTRELARMI--KAAKIDFAKLEDGEVDPAMGEYTGA 413
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFCI 366
++ +GG L A + V+++ +R I+EA + +
Sbjct: 414 GVIF---GATGGVMEAALRTAKDFMENDNLDNVDYEAVRGLAGIKEAEVEIAGNEYKLAV 470
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILC 426
+G N+ L++ K Y FIE+MACP GC+NGG Q S K E+ +
Sbjct: 471 VSGAANVFELVKSGKIN--DYHFIEVMACPGGCVNGGGQPHISAEDSDKIDIREVRASVL 528
Query: 427 -----DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L K + +N+ L +Y+ ++G + +L+ Y
Sbjct: 529 YNQDKNLEKRKSHQNSALLKMYENYMGKPGHGRAHELLHMKY 570
>gi|300121909|emb|CBK22483.2| unnamed protein product [Blastocystis hominis]
Length = 543
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 137/272 (50%), Gaps = 27/272 (9%)
Query: 169 LENEFLDRFLSGGGPLFTSECPGWVCYAEK-SHGEFILPYISRVKSPQQVMGSLIKTHLA 227
+NE ++ P TS CPGWVCYAEK +H ++P++S KS QQ+MGSL++ L
Sbjct: 225 FQNESSHPSITANHPFITSNCPGWVCYAEKKTHA--LVPFLSTTKSAQQIMGSLLRKMLP 282
Query: 228 EKLG--VHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA 285
+ IY +++ CYD+KLEASR DF + G ++DCV+ E+ LL
Sbjct: 283 TLTNEPIQSQDIYIASVVSCYDRKLEASRRDFMDPA-GIHEIDCVLATQEIAELLEKPAP 341
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTG-------SGGYAHNVLSHAIRQLCPG--- 335
+ + W WDE M T SGG ++L +
Sbjct: 342 SAP----SAPVRVW-WDEKRWEAMESGCRTAFDDVLMSSGGVLQSLLKFELLSRPAARLV 396
Query: 336 -----ESPVVEFKPLRNPDIREATFTCGD-VTLRFCIANGFRNIQNLIQKLKRKRLPYDF 389
E+ + + +RN D E++ G+ + R GFRNIQNL K+KR + YD
Sbjct: 397 FALFVENSMKRTRTVRNSDFVESSVCVGEEIVFRGAFIYGFRNIQNLAMKIKRGKCVYDA 456
Query: 390 IEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
+E+MACPSGCLNGG QIR EK + + A EL
Sbjct: 457 VEVMACPSGCLNGGGQIRPEKRENMMKIAEEL 488
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDD--GAYIQETNG--RE 59
S FSG + L +LDDFI P+Q C + + S ++ ++DD Y T+ +
Sbjct: 2 SYFSGTVLLGELDDFIAPAQACSTGVFGDATSTSGGKMQLVMEDDLGDDYGSATSSVIQT 61
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLS 119
K +SL DCLAC+GC+TSAE+VLI QQS + + ++ AHK + ++
Sbjct: 62 NVAKVASVSLADCLACTGCVTSAETVLIQQQSLQTFLDELKA-KAHK---------LYVA 111
Query: 120 LAIQP-VLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
+ +P +SL K + ++ ++ GV +V+ + +++E EF
Sbjct: 112 IVSRPSCVSLANKLGIPIDEAFERIRSVLYSHGVSVVVRQDLGEVIAMLESITEF 166
>gi|183013539|gb|ACC38291.1| Fe-hydrogenase [Clostridium perfringens]
Length = 572
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 187/402 (46%), Gaps = 27/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+CL C C+ + ++++SH E ++ + N+ K +++++A S+G
Sbjct: 188 TNCLLCGQCVAACPVDALSEKSHIERVQ---------DALNDPEKHVIVAIAPAVRTSMG 238
Query: 130 AKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + + Q V KL ++LG D V D+ +++E E ++R + G P+ TS
Sbjct: 239 ELFKMGYGQDVTGKLYTALRKLGFDKVFDINFGADMTIMEEATELIERIKNNGPFPMLTS 298
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV E E + +S KSPQQ+ GS KT+ + + P ++ VT+MPC
Sbjct: 299 CCPSWVREVENYFPELV-ENLSTAKSPQQIFGSASKTYYPQVADIDPKKVFTVTVMPCTS 357
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + NE G R++D VIT EL ++ + A + +D +D E+
Sbjct: 358 KKFEADRPEMENE--GIRNIDAVITTRELARMI--KAAKIDFAKLEDSEVDPAMGEYTGA 413
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFCI 366
++ +GG L A + V+++ +R IREA + +
Sbjct: 414 GVIF---GATGGVMEAALRTAKDFMENDNLDNVDYEAVRGLAGIREAEVEIAGNEYKLAV 470
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILC 426
+G N+ L++ K Y FIE+MACP GC+NGG Q S K E+ +
Sbjct: 471 VSGAANVFELVKSGKIN--DYHFIEVMACPGGCVNGGGQPHISAEDSDKIDIREVRASVL 528
Query: 427 -----DLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L K + +N+ L +Y+ ++G + +L+ Y
Sbjct: 529 YNQDKNLEKRKSHQNSALLKMYENYMGKPGHGRAHELLHMKY 570
>gi|449128681|ref|ZP_21764927.1| hydrogenase, Fe-only [Treponema denticola SP33]
gi|448941089|gb|EMB21993.1| hydrogenase, Fe-only [Treponema denticola SP33]
Length = 596
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 190/409 (46%), Gaps = 31/409 (7%)
Query: 67 ISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+ DC C CIT L + E+ + + + + K +V+ +A
Sbjct: 183 IAEADCSLCGQCITHCPVGALRERDDTEKFWRAVADPD----------KVVVVQVAPAIR 232
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---G 181
+ G L + V K+ KR+G D V D + +++E EFL+RF G
Sbjct: 233 TAWGEHLGLDLKDASVNKIFDALKRMGADYVFDTSFSADLTIMEEAYEFLERFSKGELKD 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS ++ Y+S KSP Q+ G+++K++ AE +G P I+ V
Sbjct: 293 KPMFTSCCPGWVRFI-KSQYPHLVSYLSSAKSPMQMFGAVMKSYFAESIGKKPEDIFSVA 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL--ANELATTTLQEEKDGILDW 299
+MPC KK E + FY E G+ D+DCV+T E ++ A+ L T + E D +
Sbjct: 352 IMPCVAKKGEINMELFYGEYAGH-DMDCVLTTREFVRMIKSAHILPETLKETEPDKLF-- 408
Query: 300 PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-----IREAT 354
H+ ++ G +GG L A + P FK +R+ I EA+
Sbjct: 409 ----HDASGAGIIFG-ATGGVMEAALRTAYYAIMGENCPPDAFKVVRHSSQDESGIIEAS 463
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
FT + L + +G N + LI ++ YDF+EIMACP GC+ GG Q ++
Sbjct: 464 FTLKENNLSVAVTSGLANTRRLIDSIEAGEKHYDFVEIMACPGGCVGGGGQPIHDGFELA 523
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E L I +L EN +++LY + ++ K +L+T +
Sbjct: 524 FERGQNLYFIDSNLKLRYSHENEDIKNLYNNFFEKPNSHKAHSLLHTDH 572
>gi|291549367|emb|CBL25629.1| hydrogenases, Fe-only [Ruminococcus torques L2-14]
Length = 564
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 186/398 (46%), Gaps = 40/398 (10%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+I+ TDC+ C C + I+ ++ +EV + A +++NTK ++ +A
Sbjct: 182 KIAETDCVGCGQCRVVCPTGAISIHTNIDEVWE---------ALADKNTK-VIAQIAPAV 231
Query: 125 VLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+++G F + E V+ KL G RLG D V D ++VE EF++RF SG
Sbjct: 232 RVAIGDNFGYAKGENVMGKLVGVLHRLGFDEVYDTSYGADLTVVEESKEFIERFTSGEKM 291
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CP WV Y E + EF+ P +S +SPQQ+ G++++ + + I V++
Sbjct: 292 PLFTSCCPAWVKYCENKYPEFV-PNLSTCRSPQQMFGAVVREYYKDPEKNEGKKIVSVSI 350
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK E R + Y G +DVD V+T E+ ++ K GI+ +D
Sbjct: 351 MPCTAKKEEILRPESYTN--GKQDVDYVLTTTEIVRMI-----------RKSGIV---FD 394
Query: 303 EHNPHRMLLVNGTGSG-----GYAHNVLSHAIRQLCPGESPV----VEFKPLRNPD-IRE 352
+ + G GSG G V +R+L G + V ++ +R D I+
Sbjct: 395 KVEIEAADVPFGIGSGSGVIFGVTGGVTEAVLRRLQQGHNRVDMESIKKSGVRGDDGIKV 454
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
T+ ++ + NG N ++Q++K YDF+E+MAC GC+ GG Q N
Sbjct: 455 LTYNYNGREIKAAVVNGLANADKVLQQIKNHEAEYDFVEVMACRRGCIMGGGQPVNAGPR 514
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGK 450
+ K L + + EN + LY L GK
Sbjct: 515 TRKARMKGLYDTDVNTQIKKSNENPMILSLYDTLLKGK 552
>gi|336169759|gb|AEI25542.1| FeFe-hydrogenase [Clostridium sp. 3-9]
Length = 572
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 181/395 (45%), Gaps = 31/395 (7%)
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
V ++CL C C+ + + ++SH E +K A+ + K +V+++A
Sbjct: 181 VSFDDSNCLLCGQCVIACPVAALKEKSHTEKVK---------AALADPKKHVVVAMAPAV 231
Query: 125 VLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
++G F + + V KL + LG D + D+ +++E E L R + G
Sbjct: 232 RTAMGELFNMGFGKDVTGKLYTALRTLGFDKIFDINFGADMTIMEEATELLQRVKNNGPF 291
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CP WV A+ + + +L +S KSPQQ+ G+ KT+ G++P +Y VT+
Sbjct: 292 PMFTSCCPAWVRLAQNYYPD-LLKNLSSAKSPQQIFGTATKTYYPSITGINPEDVYTVTI 350
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC DKK EA E G R +D V+T EL ++ + A E +D D
Sbjct: 351 MPCNDKKYEADLEAM--EVNGLRQIDAVLTTRELAKMIKD--AKIKFAELEDSEHDPAMG 406
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVT 361
E++ ++ +GG L A E VE+ +R + I+EAT
Sbjct: 407 EYSGAGVIF---GATGGVMEAALRTAKDFAENAELENVEYTQVRGLEGIKEATVEIAGNN 463
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
+ NG N ++ K Y FIE+MACP GC+NGG Q V + +A++
Sbjct: 464 YNVAVINGAANFFEFMKSGKMDEKQYHFIEVMACPGGCVNGGGQ---PHVNAETRSAVDY 520
Query: 422 ETILC--------DLAKSEPRENATLEHLYKAWLG 448
T+ +L K + +N + +Y+++ G
Sbjct: 521 RTLRASVLYNQDKNLPKRKSHKNPAIVKMYESYFG 555
>gi|224369752|ref|YP_002603916.1| protein HydA2 [Desulfobacterium autotrophicum HRM2]
gi|223692469|gb|ACN15752.1| HydA2 [Desulfobacterium autotrophicum HRM2]
Length = 599
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 200/408 (49%), Gaps = 33/408 (8%)
Query: 70 TDCLACSGCI-TSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
+DC++C CI L + + E+ M +I N T+V A ++
Sbjct: 193 SDCISCGQCILVCPVGALAGRNNIEDAMDLI---------YNPELITVV-QFAPAVRTAM 242
Query: 129 GAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F ++ E V AK+ KRLGVD+VLD A ++E +E L R + G P+FT
Sbjct: 243 GEEFNMAKGENVEAKMITALKRLGVDVVLDTNFAADLVIMEEGSELLHRLKNKGTLPMFT 302
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + EK++ E + P IS SPQQ +G++ KT+LAEK+ + P I +++MPC
Sbjct: 303 SCCPGWVNFVEKNYPE-MTPNISTTSSPQQCLGAMAKTYLAEKMDLDPDRIRVISIMPCT 361
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA R +F + G DVD V+T E LL E L + +D D PW
Sbjct: 362 AKKGEAQRPEF--QRNGRPDVDVVLTTREFSRLLKRE--GLDLAKLEDSQFDNPWMTDYS 417
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIR---QLCPG-ESPVVEFKPLRNPDI-REATFTCGDV- 360
++ TG V+ A+R +L G E VE+ LR + REAT G
Sbjct: 418 GAAVIFGNTGG------VMEAAVRTVHKLVTGNELDAVEYTDLRGDALRREATVDLGPAL 471
Query: 361 -TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV--ASPKET 417
++ + + + + L+ ++K PY F+E+MACP GC GG Q R++ + +E
Sbjct: 472 GEVKLAVVHTLKEARRLMDEIKSGNSPYGFVEVMACPGGCQGGGGQPRSKHSYHGTARER 531
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ + I + + N ++ LY +L K +L+T+Y +
Sbjct: 532 SQGIYNIDKNRTIRQSHNNPMIKRLYADFLKKPLGHKSHELLHTTYRD 579
>gi|419759368|ref|ZP_14285669.1| hydrogenase-1 [Thermosipho africanus H17ap60334]
gi|407515581|gb|EKF50319.1| hydrogenase-1 [Thermosipho africanus H17ap60334]
Length = 658
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 191/414 (46%), Gaps = 41/414 (9%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
E+S T+C+ C C+ + +T ++ + N +KA E K I+ +A
Sbjct: 180 ELSTTNCVLCGQCVAHCPTGALTFRNDLQ--------NVYKAM--EEGKYIIGMMAPAVR 229
Query: 126 LSLGAKFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
S+ + + + VVA ++ F K +G V DV A E +EF +R G P
Sbjct: 230 ASIQEELGMEDDVVVAGRIVNFLKSIGFKKVFDVAFAADLVAYEEAHEFKERLEKGEKLP 289
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
FTS CPGWV +AE ++ E+ L +S VKSPQQ +GS+IK A+++GV+P IY V++M
Sbjct: 290 QFTSCCPGWVKFAEHNYPEY-LNNLSTVKSPQQALGSIIKKFYAKEIGVNPEDIYLVSIM 348
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA R + E VD VIT EL L+ + + L+ D P+
Sbjct: 349 PCTAKKFEAEREELVGE------VDAVITTRELSQLIRS--SGFNLKNVPPMPFDRPYGL 400
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR------EATFTC 357
+ + G G VL I EF ++ +I +AT
Sbjct: 401 SSQSGLSFGKTGGVFGSVLKVLESEI-----------EFDDIKTEEIEKGIRLTKATTKD 449
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKE 416
G V + + G N + +I +K +L D +E+MAC GC+ GG Q N+ K
Sbjct: 450 GKV-ISGVVVFGLGNTRKVIDSIKNGKLKVDIVEVMACDYGCIGGGGQPYPNDARVRTKR 508
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
+ E + D+ S P EN + LY+ +L + +L+T+Y N + N
Sbjct: 509 AKILNEVVGIDVLIS-PNENYHMLSLYERYLEKPLSHVSHEVLHTTYRNRKRIN 561
>gi|345856520|ref|ZP_08808998.1| hydrogenase family protein [Desulfosporosinus sp. OT]
gi|344330362|gb|EGW41662.1| hydrogenase family protein [Desulfosporosinus sp. OT]
Length = 580
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 187/400 (46%), Gaps = 24/400 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T C C CI + +T+ ++V KV + + N+ + +V+ A ++LG
Sbjct: 193 TSCTFCGQCIAVCPTGALTEL--DQVDKVWK-------ALNDPNQFVVVQTAPAVRVALG 243
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F L +V K+ G +RLG D V D A +++E E + R GG PL TS
Sbjct: 244 EEFDLEPGTIVTGKMVGALRRLGFDRVFDTDFAADLTIMEEATELVHRIQHGGRLPLLTS 303
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV + E + +L S KSP +++G LIK++ A+ LG+ P I V++MPC
Sbjct: 304 CCPAWVKFFEHQFPD-LLDIPSTCKSPHEMLGVLIKSYYAKTLGIDPKSITVVSVMPCVA 362
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA+R + + DVD VIT EL ++ A+ KD D P E
Sbjct: 363 KKYEAARPEL-AQSAETADVDIVITTRELARMIRE--ASIHFDHLKDKEFDHPLGESTGA 419
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
++ +GG L A L VEF+ LR D I+EA R +
Sbjct: 420 AIIF---GATGGVLEAALRTAYEVLTGETLEKVEFEALRGMDGIKEAVIPIAGRDYRIAV 476
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETALELET 423
+G N + +++K+K YD IEIMACP GC+ GG Q N + + A+ E
Sbjct: 477 IHGLGNARTVLEKIKAGESNYDVIEIMACPGGCIGGGGQPYHHGNMDILQARAAAIYRED 536
Query: 424 ILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L KS EN + LYK +LG K +L+TSY
Sbjct: 537 RAKPLRKSH--ENLAIVSLYKDYLGEPYGKKAHQLLHTSY 574
>gi|410658229|ref|YP_006910600.1| putative iron-only hydrogenase, catalytic subunit HymC
[Dehalobacter sp. DCA]
gi|410661215|ref|YP_006913586.1| putative iron-only hydrogenase, catalytic subunit HymC
[Dehalobacter sp. CF]
gi|409020584|gb|AFV02615.1| putative iron-only hydrogenase, catalytic subunit HymC
[Dehalobacter sp. DCA]
gi|409023571|gb|AFV05601.1| putative iron-only hydrogenase, catalytic subunit HymC
[Dehalobacter sp. CF]
Length = 594
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 195/407 (47%), Gaps = 39/407 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
+ C C C+ + +T+ +H + KV + N K +++ A +++G
Sbjct: 208 SSCTYCGQCVQVCPTAALTEINHTD--KVWE-------ALNNPDKYVIVQTAPAIRVAIG 258
Query: 130 AKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + + +L KR+G + V D +++E +E + R + P+ TS
Sbjct: 259 EIFDMEPGTIATGQLVTALKRIGFNAVFDTDFGADLTIMEEASELIYRLQNNKTLPILTS 318
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV + E E +L S KSP + G+++KT+ AEK G+ P +I V++MPC
Sbjct: 319 CCPAWVKFIEHQFPE-LLEVPSTCKSPHIMFGTIVKTYYAEKNGIDPDNIVVVSVMPCIA 377
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + +E + +VD V+T EL +++ K+ LD+ + +
Sbjct: 378 KKAEAKRPELTKDE--HNNVDIVVTTRELGLMI------------KEAGLDFSNLPSSEY 423
Query: 308 RMLLVNGTG-------SGGYAHNVLSHAIRQLCPGESPVVEFKPLR-NPDIREATFTCGD 359
L TG SGG L A L E VEF+ LR + +R+AT GD
Sbjct: 424 DKSLGETTGASVIFGTSGGVIEAALRTAYEWLTGEELQKVEFEQLRGDGGLRKATVQIGD 483
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKE 416
LR IA+G N + L+++++ + Y+ IEIMACP GC+ GG Q N ++ ++
Sbjct: 484 KMLRIGIASGLGNARTLLEEIRDGKNQYEAIEIMACPGGCVAGGGQPYHHGNFEIVRKRQ 543
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
A+ E + KS EN+ ++ LY+ +LG +D +L+T +
Sbjct: 544 EAIYQEDKNKKIRKS--HENSEIQKLYQEYLGQPFSDTAHRLLHTHF 588
>gi|319937321|ref|ZP_08011728.1| HymC protein [Coprobacillus sp. 29_1]
gi|319807687|gb|EFW04280.1| HymC protein [Coprobacillus sp. 29_1]
Length = 582
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 193/408 (47%), Gaps = 29/408 (7%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
SL D C+ C CI + Q EE+ VI + N K +V+ A
Sbjct: 185 SLNDVNCMQCGQCINVCPVGAL--QEKEEIHNVIE-------ALNNPAKHVVVQTAPAVR 235
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
SLG +F + +V K+ K LG D V D +++E EF++R +GG P
Sbjct: 236 ASLGEEFGMPIGTRVTGKMVAALKLLGFDKVYDTNFGADLTIMEEGYEFINRLQNGGVLP 295
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS PGW+ Y EK + + +L ++S KSP ++G++IK++ A++ + P +IY V++M
Sbjct: 296 MITSCSPGWINYCEKEYPD-LLDHLSSCKSPHMMLGAMIKSYYAKQHQLDPKNIYVVSIM 354
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP-WD 302
PC KK E R+ +E+ +DVD V+T EL L+ ++ + KD D +
Sbjct: 355 PCVAKKGEKERSQMMKDEM--KDVDAVLTTRELGKLI--KMFGVNFIDLKDEEFDQDMFG 410
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNP-DIREATFTCGDVT 361
E+ ++ SGG L + L + +E+ +R ++EA+ GD+
Sbjct: 411 EYTGAGVIF---GASGGVMEAALRTVVDVLTNQDLDNIEYHSVRGQRGLKEASLQVGDLK 467
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNEKVASPK 415
+ +A+ + L++++K Y FIEIM CP GC+NGG Q IRN
Sbjct: 468 VNVAVAHSMTIAKPLLEEIKAGTSKYHFIEIMGCPGGCINGGGQSYVNALIRNSGFDFKG 527
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
A L + + +N ++ LY +L ++ +L+T+Y
Sbjct: 528 ARAKALYDEDRAMPARKSHKNTQIQKLYDEFLEHPNSHIAHELLHTTY 575
>gi|392425996|ref|YP_006466990.1| hydrogenase, Fe-only [Desulfosporosinus acidiphilus SJ4]
gi|391355959|gb|AFM41658.1| hydrogenase, Fe-only [Desulfosporosinus acidiphilus SJ4]
Length = 521
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 193/431 (44%), Gaps = 53/431 (12%)
Query: 62 LKKVEISLTD---CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVL 118
+ E+ L D C+ C C S I+++ + +KA +N N K +V+
Sbjct: 100 FRNYELPLKDEIVCVNCGQCTQWCPSGAISERDDTD--------KVYKAIANSNIK-VVV 150
Query: 119 SLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF 177
A + LG +F L V K ++LG D+V D +++E E + R
Sbjct: 151 QTAPATRIGLGEEFGLPVGTNVQGKQVAALRKLGFDVVFDTNFTADLTIMEEGTELVKRI 210
Query: 178 ---LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
L P TS CPGWV + E + + I P +S KSPQQ+ G+L+KT+ AEK V P
Sbjct: 211 KGELKKPLPQLTSCCPGWVKFVEYYYPDLI-PNLSSAKSPQQMEGTLMKTYYAEKKNVDP 269
Query: 235 SHIYHVTLMPCYDKKLEASRADF------YNEELGYRDVDCVITAVELEVLLANELATTT 288
I V +MPC KK E R + N++ DVD V+T EL ++ + A
Sbjct: 270 KKIVSVAIMPCTAKKFECQRPELASAGKELNDKNVSPDVDVVLTTRELARMI--KRAGID 327
Query: 289 LQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESP---V 339
DG D L+ +GTG+G G V+ A R L G+ P +
Sbjct: 328 FSSLPDGQYD----------KLMGSGTGAGAIFGTTGGVMEAAARSAYYLVTGQQPPSAL 377
Query: 340 VEFKPLRN-PDIREATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPS 397
+ P+R ++EA V ++ + +G N + ++ +++ +DFIE+MACP
Sbjct: 378 WDLTPVRGMQGVKEAEINIPGVGNMKVAVISGLANARKVMDQIQAGNATWDFIEVMACPG 437
Query: 398 GCLNGGAQIRNEKVASPKET-----ALELETILCDLAKSEPRENATLEHLYKAWLGGKST 452
GC GG Q R A P + A L I + EN ++ +Y +L +
Sbjct: 438 GCEYGGGQPR--AAAPPSDDVRNRRAASLYKIDANAKIRNSYENPEIKQIYADFLTSPMS 495
Query: 453 DKGKHMLNTSY 463
+K + +L+T+Y
Sbjct: 496 EKAEELLHTTY 506
>gi|404370031|ref|ZP_10975358.1| hydrogenase, Fe-only [Clostridium sp. 7_2_43FAA]
gi|226913838|gb|EEH99039.1| hydrogenase, Fe-only [Clostridium sp. 7_2_43FAA]
Length = 575
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 198/407 (48%), Gaps = 26/407 (6%)
Query: 67 ISLTDCLACSGCITSAESVLITQQS-HEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+ T+C C C+ + + ++S +++V +++ +NN K +V+ +A
Sbjct: 188 INETNCTYCGQCVAVCPTGALREKSDYKKVWEILDDNN----------KYVVVQIAPAVR 237
Query: 126 LSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+L +F L S E K+ K L D V D A +++E NEF++RF G P
Sbjct: 238 SALAEEFGLESGELSTGKIVTALKLLSFDSVFDTNFAADLTIMEEANEFIERFTLGENLP 297
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L TS CP W+ Y+E ++ + L +S KSPQQ+ G++ K +L ++L + ++ V++M
Sbjct: 298 LITSCCPAWINYSESNYYDN-LNLVSSCKSPQQMFGAIAKNYLPQELSIKRENLAVVSIM 356
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA+R + + + G +DVD VIT EL ++ A + D D P
Sbjct: 357 PCIAKKHEANRKEMQDID-GIKDVDLVITTRELAKIIKE--AGIDIVNLHDSEFDNPLGM 413
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTL 362
+ + GT SGG L A + E ++F+ +R + I+EA +
Sbjct: 414 SSGAGTIF--GT-SGGVMEAALRTAYEWITGKELEKIDFENVRGLEGIKEAKVDLNGKEV 470
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKETAL 419
+ + N + ++ ++K Y FIE+MACP GC++GG Q N V + ++
Sbjct: 471 NVAVVSSLGNAKKIMDEIKYGNSKYHFIEVMACPGGCIDGGGQPFIKSNRDVLKKRMNSI 530
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
E + KS EN ++ LYK +L ++ H+L+ +Y I
Sbjct: 531 YNEDKNKVIRKS--HENPMIQKLYKDYLQKPNSYIAHHILHVNYKRI 575
>gi|332652330|ref|ZP_08418075.1| putative [Fe] hydrogenase, large subunit HymC [Ruminococcaceae
bacterium D16]
gi|332517476|gb|EGJ47079.1| putative [Fe] hydrogenase, large subunit HymC [Ruminococcaceae
bacterium D16]
Length = 564
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 190/402 (47%), Gaps = 25/402 (6%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
+S T C++C C + IT + ++ K R + ++ K +V+ +A +
Sbjct: 185 LSETHCISCGQCAAVCPTGAIT--IYNQIGKAWR-------AIHDPQKRVVVQIAPAVRV 235
Query: 127 SLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
++G F L + + V+ +L K +GVD V D F+ +E EFL R GG P+
Sbjct: 236 AVGEAFGLPAGQNVLDQLVTALKFMGVDEVYDTTFGADFTTIEESQEFLARLEKGGPFPM 295
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CP WV Y E + ++ L IS KSP ++ ++I+ H +K +H+ +MP
Sbjct: 296 FTSCCPAWVKYLENENPKY-LKNISTCKSPMEMFAAIIREHYQKKDAEDGRSTFHIAIMP 354
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK+EA+R FY+ G DVD V+T E+ + + E Q E + D P+
Sbjct: 355 CTAKKMEAARPQFYHN--GKPDVDVVLTTQEI-INMIKESGIQLPQMELESP-DLPFGLG 410
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR-NPDIREATFTCGDVTLR 363
+ ++ SGG A +V+ + + +++ PLR N IREAT G+ ++
Sbjct: 411 SGAAVIY---GSSGGVAESVVRYCLPDKSKNTLRELQYSPLRGNEAIREATVQVGEREIK 467
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELET 423
+ +G N Q L++++ YD +E+M CPSGC+ G Q K A
Sbjct: 468 LAVVHGLINAQKLLKEIDAGTAYYDLVEVMTCPSGCVGGAGQPYGLKQKKQDRAAG---- 523
Query: 424 ILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
L ++ P + A + +L + ++ +L+TSY
Sbjct: 524 -LYAADRAAPFKRAEKNPVVLDFLNNYTPEQRHELLHTSYQG 564
>gi|57235003|ref|YP_180897.1| [Fe] hydrogenase, large subunit HymC [Dehalococcoides ethenogenes
195]
gi|57225451|gb|AAW40508.1| [Fe] hydrogenase, large subunit HymC, putative [Dehalococcoides
ethenogenes 195]
Length = 573
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 188/372 (50%), Gaps = 27/372 (7%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFS 165
A+ + TK +V+ A +SLG + L +VAK + +RLG D V D +
Sbjct: 216 AAIADPTKHVVVQEAPSVRVSLGEELGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLT 275
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E +E ++R GG P TS CPGWV + E + E + P +S KSPQQ+ G++ KT
Sbjct: 276 IMEEGSELVERVKDGGVLPQITSCCPGWVKFMEHYYPE-LAPNVSSAKSPQQMFGAVCKT 334
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEK G+ P I +V++MPC KK E R + + G++DVD V+T EL ++
Sbjct: 335 YYAEKSGIDPKDIINVSVMPCTAKKFECQRPEMNDS--GFKDVDYVLTTRELARMI---- 388
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPG-ES 337
K+ LD+ + P LL TG+ G V+ AIR L G E
Sbjct: 389 --------KEAGLDFASLDEEPAEDLLGLYTGAATIFGATGGVMEAAIRSAYTLITGREL 440
Query: 338 PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
++ +P+R + I+ A+ + ++ +A+G N ++L+ ++K PY FIEIMACP
Sbjct: 441 ENLDIEPVRGLEGIKTASVNIDGLEVKVAVAHGLGNARHLLDEIKEGVSPYHFIEIMACP 500
Query: 397 SGCLNGGAQ-IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKG 455
GC+ GG Q IR + K E ++AK N ++E +YK +L +
Sbjct: 501 GGCVGGGGQPIRFDSTLKKKRGEALYEEDR-NMAKRCSHHNPSVEKIYKDYLEKPLGKRS 559
Query: 456 KHMLNTSYHNIP 467
+L+T Y + P
Sbjct: 560 HKLLHTEYTSRP 571
>gi|51894344|ref|YP_077035.1| iron hydrogenase [Symbiobacterium thermophilum IAM 14863]
gi|51858033|dbj|BAD42191.1| iron hydrogenase [Symbiobacterium thermophilum IAM 14863]
Length = 596
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 195/424 (45%), Gaps = 57/424 (13%)
Query: 67 ISLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+SL D C C C + +T+ ++E V R + + TK +V+ A
Sbjct: 190 VSLNDAACALCGQCTVVCPTGALTE--YDETEAVWR-------ALLDPTKHVVVQTAPAV 240
Query: 125 VLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+ +G F L V K+ +RLG D V D + +++E E + R GG
Sbjct: 241 RVQIGEPFGLPPGAVSTGKMVAGLRRLGFDQVFDTVFSADLTIMEEATELIQRLQKGGPL 300
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PL TS PGWV +AE +L +S KSPQQ+ G+L KT+ AEK G+ P+ + V++
Sbjct: 301 PLITSCSPGWVKFAEHFFPN-MLENLSTCKSPQQMFGALAKTYYAEKAGIDPADMVVVSV 359
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK EA+R + + GY+DVD V+T EL + A L D D P
Sbjct: 360 MPCTAKKYEANRPEMRDS--GYQDVDYVLTTRELARMFRQ--AGIDLPSLPDEEFDNP-- 413
Query: 303 EHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ----LCPGE-SPVVEFKPLRNP--DIRE 352
L GTG+G G V+ A+R L PG SP +EF+ +R +RE
Sbjct: 414 --------LGIGTGAGTIFGTTGGVMEAALRTAAAWLEPGSPSPKIEFQEVRGIPFQVRE 465
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMA------------CPSGCL 400
AT T VTL +ANG L++++ R Y FIEIM P+
Sbjct: 466 ATVTLDGVTLNVAVANGLGAAGWLMEEVSAGRKNYHFIEIMGCPGGCIGGGGQPIPAKGP 525
Query: 401 NGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
+ ++R ++AS L TI + EN ++ +Y +LG +++ H+L+
Sbjct: 526 DALDEVRLARIAS-------LYTIDERMTIRRSHENPAIQQVYAEYLGKPGSERAHHLLH 578
Query: 461 TSYH 464
T Y
Sbjct: 579 THYQ 582
>gi|217076874|ref|YP_002334590.1| hydrogenase-1 [Thermosipho africanus TCF52B]
gi|217036727|gb|ACJ75249.1| hydrogenase-1 [Thermosipho africanus TCF52B]
Length = 658
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 191/414 (46%), Gaps = 41/414 (9%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
E+S T+C+ C C+ + +T ++ + N +KA E K I+ +A
Sbjct: 180 ELSTTNCVLCGQCVAHCPTGALTFRNDLQ--------NVYKAM--EEGKYIIGMMAPAVR 229
Query: 126 LSLGAKFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
S+ + + + VVA ++ F K +G V DV A E +EF +R G P
Sbjct: 230 ASIQEELGMEDDVVVAGRIVNFLKSIGFKKVFDVAFAADLVAYEEAHEFKERLEKGEKLP 289
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
FTS CPGWV +AE ++ E+ L +S VKSPQQ +GS+IK A+++GV+P IY V++M
Sbjct: 290 QFTSCCPGWVKFAEHNYPEY-LNNLSTVKSPQQALGSIIKKFYAKEIGVNPEDIYLVSIM 348
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA R + E VD VIT EL L+ + + L+ D P+
Sbjct: 349 PCTAKKFEAEREELVGE------VDAVITTRELSQLIRS--SGFNLKNVPPVPFDRPYGL 400
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIR------EATFTC 357
+ + G G VL I EF ++ +I +AT
Sbjct: 401 SSQSGLSFGKTGGVFGSVLKVLESEI-----------EFDDIKTEEIEKGIRVTKATTKD 449
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKE 416
G V + + G N + +I +K +L D +E+MAC GC+ GG Q N+ K
Sbjct: 450 GKV-ISGVVVFGLGNTRKVIDSIKNGKLKVDIVEVMACDYGCIGGGGQPYPNDARVRTKR 508
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
+ E + D+ S P EN + LY+ +L + +L+T+Y N + N
Sbjct: 509 AKILNEVVGIDVLIS-PNENYHMLSLYERYLEKPLSHVSHEVLHTTYRNRKRIN 561
>gi|331003601|ref|ZP_08327097.1| hypothetical protein HMPREF0491_01959 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412321|gb|EGG91713.1| hypothetical protein HMPREF0491_01959 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 573
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 167/340 (49%), Gaps = 28/340 (8%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I DC C CIT ++++ + + + + KT+V+ +A
Sbjct: 182 KIEEADCSLCGQCITHCPVGALSERD---------DTSKFWEAIADPEKTVVVQIAPAVR 232
Query: 126 LSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGG 181
+ G F L + V K+ K++G D V D + +++E NEF+ R+ L G
Sbjct: 233 TAWGEVFGLKDKDATVGKIVDALKKMGADYVFDTSFSADLTIMEEANEFVHRYTNGLIGD 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS + +S KSPQQ+ G+++K++ AEK+GV P ++ V+
Sbjct: 293 RPMFTSCCPGWVRFI-KSQYPRMTKSLSTAKSPQQMFGAVMKSYFAEKIGVKPENMVSVS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWP 300
+MPC KK E F+ E G+ DVD +T EL L+ A + +L+ D I D P
Sbjct: 352 IMPCVAKKGEREMELFHGEYAGH-DVDIALTTRELTRLIRAAHIDPKSLE---DVIADRP 407
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR------NPDIREAT 354
+++ ++ GT +GG L A + P FKP+R N EAT
Sbjct: 408 MGDYSGAGVIF--GT-TGGVMEAALRTAYSVIKKENPPADAFKPVRSKAFQENDGTIEAT 464
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMA 394
F D+ L + +G N + L+ K++R YDF+E+MA
Sbjct: 465 FKIDDIELNIAVVSGLGNTRKLLNKIERGEAKYDFVEVMA 504
>gi|375086547|ref|ZP_09732953.1| hydrogenase, Fe-only [Megamonas funiformis YIT 11815]
gi|374564686|gb|EHR35968.1| hydrogenase, Fe-only [Megamonas funiformis YIT 11815]
Length = 580
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 185/403 (45%), Gaps = 22/403 (5%)
Query: 66 EISLTDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
E T C+ C C + L+ + + V+ I + N KT+++ A
Sbjct: 186 EFDNTKCVLCGQCSLACPVGALVEKDDTDRVLDAIFDPN----------KTVIVQTAPSV 235
Query: 125 VLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
++LG +F + +V K + + +G D V D ++ E NE ++R SG
Sbjct: 236 RIALGDEFGMPKGSIVTKKMVTALRMIGFDKVFDTNYGADLTITEEANELIERIKSGKKM 295
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ TS CPGWV Y EK + + +L ++S KSP Q+ ++ KTH A++ + P +I+ V +
Sbjct: 296 PMATSCCPGWVNYMEKHYPD-LLDHLSTTKSPMQIFSAITKTHYAKQENLDPKNIFTVAI 354
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK E +R + ++ G D D V+T EL L+ + + + D P
Sbjct: 355 MPCIAKKYEITRPEMAHD--GRPDTDAVLTTRELIKLI--KYIGIDFENLPESEFDNPMG 410
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVT 361
+ +GG L L E VE+ P+R D I+EA GD T
Sbjct: 411 TATGAAAIF---GATGGVMEAALRTTYEWLTGEEMKNVEYTPVRGFDGIKEAQINIGDKT 467
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
+ +A+ N + L+ KL+ YDFIE+MACP GCL GG Q + K+ +
Sbjct: 468 INIAVAHTLNNAKILMDKLRAGECKYDFIEVMACPGGCLGGGGQPIGTTMEVNKKRMESI 527
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
I + + EN L+ LYK +L ++ +L+T Y
Sbjct: 528 YQIDKNTKYRKSHENPYLKQLYKDFLEKPGSEIAHKLLHTHYQ 570
>gi|331269709|ref|YP_004396201.1| hydrogenase [Clostridium botulinum BKT015925]
gi|329126259|gb|AEB76204.1| hydrogenase [Clostridium botulinum BKT015925]
Length = 582
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 192/406 (47%), Gaps = 30/406 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL--S 127
++CL C C+++ ++++SH + +VI ++ EN K V+ +AI P + S
Sbjct: 194 SNCLLCGQCVSACPVDALSERSH--INRVI--------TALENPKKHVI-VAIAPSVRAS 242
Query: 128 LGAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLF 185
+G F + + V KL K L D V D+ +++E E + R + G P+F
Sbjct: 243 IGEAFNMGYGIDVTGKLYTSLKILRFDKVFDLNFGADLTIIEESCELIKRIKNNGPFPMF 302
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CPGW+ EK E I P +S KSPQQ+ G+ KT+ + ++PS I+ VT+MPC
Sbjct: 303 TSCCPGWIRQVEKYFKELI-PNLSSTKSPQQIFGAATKTYYPHIMNMNPSDIFTVTIMPC 361
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK E+ R D E G +D V+TA EL L+ N A + ++ D E++
Sbjct: 362 TAKKFESERDDMDIE--GINSIDAVLTARELVKLIKN--AKIDFKNLEESTPDPAMGEYS 417
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGES-PVVEFKPLRNPD-IREATFTCGDVTLR 363
++ +GG L A L E +++ +R + I+EAT T +
Sbjct: 418 GAGVIF---GATGGVMEAALRTAKDFLENNEHLKTIDYSSIRGFNGIKEATVTLKEQNYN 474
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR-----NEKVASPKETA 418
+ NG N+ + K + Y FIE+M+C GC+NGG E + + +
Sbjct: 475 IAVINGASNVFKFMNSDKINKKQYHFIEVMSCEGGCINGGGHPHINSNDRELINYKQLRS 534
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
L +L+K + EN L +YK ++G D + + SY+
Sbjct: 535 SVLYNQDKNLSKRKAHENEALIKMYKNYIGKPGNDLAHKIFHISYN 580
>gi|404494164|ref|YP_006718270.1| cytoplasmic NADPH oxidoreductase-associated [FeFe]-hydrogenase
[Pelobacter carbinolicus DSM 2380]
gi|77546179|gb|ABA89741.1| cytoplasmic NADPH oxidoreductase-associated [FeFe]-hydrogenase
[Pelobacter carbinolicus DSM 2380]
Length = 598
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 208/414 (50%), Gaps = 39/414 (9%)
Query: 67 ISLTDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
++ +DC++C C + L + EEV+ + N+ V+ A
Sbjct: 189 LNTSDCVSCGQCTLVCPVGALAERDDTEEVIDYL----------NDPEMFTVVQFAPATR 238
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + V ++ F+++G D+VLD ++E +E L R GG P
Sbjct: 239 VALGEEFNMKPGSNVEGQMITAFRKMGADVVLDTNFTADVVIMEEGSELLHRVKEGGTLP 298
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L TS PGW+ Y EK + + I +S KSPQQ +G++ KT+LAEK+ + P+ + +++M
Sbjct: 299 LLTSCSPGWINYVEKFYPDMIC-NLSTTKSPQQCLGAIAKTYLAEKMAIDPAKMRVISIM 357
Query: 244 PCYDKKLEASRADFYNEELGYR-DVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
PC KK EA R +F +G R +VD V+T EL LL E L + ++G D PW
Sbjct: 358 PCTAKKEEAKRPEF---TIGDRPEVDVVLTTRELGSLLKRE--GIWLPDLEEGNFDNPW- 411
Query: 303 EHNPHRMLLVNGT----GSGGYAHNVLSHAIRQLCPGES-PVVEFKPLRNPD-IREATFT 356
M + G GS G + + GE P V+ K +R + IREA+
Sbjct: 412 ------MGVATGAAEIFGSTGGVMEAAVRTVHYIVTGEEIPGVDLKAVRGLEGIREASVD 465
Query: 357 CGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
G++ T+ IAN ++ + L+++++ Y FIE+MACP GC+ GG Q ++++
Sbjct: 466 LGELGTVNVAIANSLKSARELLERVRSGEKEYHFIEVMACPGGCMGGGGQPKHKRNYREF 525
Query: 416 ETALELETILCDLAKSEPRE---NATLEHLYKAWLGGK-STDKGKHMLNTSYHN 465
TA + D A SE R+ N ++ +Y ++ G S+++ L+T+Y +
Sbjct: 526 LTARQKAIYDID-AGSELRQSHRNPLVKEMYDSYFGEPYSSERSHKYLHTTYTD 578
>gi|449107435|ref|ZP_21744089.1| hydrogenase, Fe-only [Treponema denticola ASLM]
gi|451969127|ref|ZP_21922356.1| hydrogenase, Fe-only [Treponema denticola US-Trep]
gi|448961635|gb|EMB42330.1| hydrogenase, Fe-only [Treponema denticola ASLM]
gi|451701995|gb|EMD56429.1| hydrogenase, Fe-only [Treponema denticola US-Trep]
Length = 596
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 191/408 (46%), Gaps = 29/408 (7%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I+ DC C CIT + ++ E +A +N + K +V+ +A
Sbjct: 183 IADADCSLCGQCITHCPVGALRERDDTEKF--------WRAVANPD-KVVVVQVAPAIRT 233
Query: 127 SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---GG 182
+ G L + V K+ KR+G D V D + +++E EF++RF G
Sbjct: 234 AWGEHIGLDLKDASVNKIFDALKRIGADYVFDTAFSADLTIMEEAYEFIERFSKGELKDK 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CPGWV + KS ++ ++S KSP Q+ G+++K++ AEK+G P I+ V +
Sbjct: 294 PMFTSCCPGWVRFI-KSQYPHLVSHLSSAKSPMQMFGAVMKSYFAEKIGKKPEDIFSVAI 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL--ANELATTTLQEEKDGILDWP 300
MPC KK E S FY E G+ D+DCV+T E ++ A+ L T + E D +
Sbjct: 353 MPCVAKKGEISMELFYGEYAGH-DMDCVLTTREFVRMIKSAHILPETLKETEPDKLF--- 408
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-----IREATF 355
H+ ++ G +GG L A + P FK +R+ I EA+F
Sbjct: 409 ---HDASGAGIIFG-ATGGVMEAALRTAYYAIMGKNCPPDAFKVVRHSSQEESGIIEASF 464
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
T + LR + +G N + LI ++ YDF+EIMACP GC+ GG Q +E
Sbjct: 465 TLKENNLRIAVTSGLANTRRLIDSIEAGEKHYDFVEIMACPGGCVGGGGQPIHESGELAV 524
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ L I + EN ++ LY + ++ K +L+T +
Sbjct: 525 KRGSNLYFIDKNSKVRYSHENECIKALYNDFFEKPNSHKAHSLLHTDH 572
>gi|194375053|dbj|BAG62639.1| unnamed protein product [Homo sapiens]
Length = 140
Score = 148 bits (373), Expect = 7e-33, Method: Composition-based stats.
Identities = 76/134 (56%), Positives = 101/134 (75%), Gaps = 5/134 (3%)
Query: 3 SSRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQ-ETNGREEK 61
+S FSG LQLTDLDDFIGPSQECIKP+ +EK +G AKIRI+DDG+Y Q +G +
Sbjct: 2 ASPFSGALQLTDLDDFIGPSQECIKPVKVEKRAGSGV-AKIRIEDDGSYFQINQDGGTRR 60
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
L+K ++SL DCLACSGCITSAE+VLITQQSHEE+ KV+ +A+K ++ + +V+S++
Sbjct: 61 LEKAKVSLNDCLACSGCITSAETVLITQQSHEELKKVL---DANKMAAPSQQRLVVVSVS 117
Query: 122 IQPVLSLGAKFALS 135
Q SL A+F L+
Sbjct: 118 PQSRASLAARFQLN 131
>gi|168205052|ref|ZP_02631057.1| [Fe] hydrogenase [Clostridium perfringens E str. JGS1987]
gi|170663376|gb|EDT16059.1| [Fe] hydrogenase [Clostridium perfringens E str. JGS1987]
Length = 696
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 197/420 (46%), Gaps = 45/420 (10%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C + IT+ + + + S ++ K +++S + +SLG +
Sbjct: 58 CINCGQCANVCPTSSITE---------VFDYKKVQDSISDKDKIVIVSTSPAIRVSLGEE 108
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTSE 188
F ++ V K+ ++LG D +LD A ++VE +E ++R PL FTS
Sbjct: 109 FNMNDGSFVQGKMIALLRKLGFDYILDTNFAADMTIVEEASELVERITKNNKPLPQFTSC 168
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP WV YAE H E IL +IS KSP + G IKT+ A+K+G+ PS I +V L PC K
Sbjct: 169 CPAWVKYAETFHPE-ILEHISTSKSPIGMQGPTIKTYFAKKMGIDPSKIINVALTPCTAK 227
Query: 249 KLEASRAD------FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
K E R + +Y E RD+D VIT EL + K+ +D+
Sbjct: 228 KFEIKREEMNASGRYYGIE-DMRDMDYVITTRELAIWA------------KEKGIDFNSL 274
Query: 303 EHNPHRMLLVNGTGSGGYAHN---VLSHAIR---QLCPGESPVVEFKPLRN----PDIRE 352
E + L+ +G+G N V+ A+R + E P +F L + +RE
Sbjct: 275 EDSNFDKLMGEASGAGVIFANTGGVMEAALRTAYKYITKEDPPKDFYDLESVRGMEGVRE 334
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
A+F D+ + + G N I K+K + Y FIE+M CP GC+ GG Q +++K
Sbjct: 335 ASFKINDLEINIAVIYGTENASKFISKIKNEDKKYHFIEVMTCPGGCIGGGGQPKDKKFE 394
Query: 413 SPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
K ++ + + + R EN ++ LY+ + G ++ + ML+T Y + K+
Sbjct: 395 GDKLREKRIDGLYKRDSNMKLRVSYENEEIKKLYEEFYGKPLSNLAEEMLHTIYFDRSKD 454
>gi|449109329|ref|ZP_21745965.1| hydrogenase, Fe-only [Treponema denticola ATCC 33520]
gi|448959137|gb|EMB39859.1| hydrogenase, Fe-only [Treponema denticola ATCC 33520]
Length = 596
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 191/408 (46%), Gaps = 29/408 (7%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I+ DC C CIT + ++ E +A +N + K +V+ +A
Sbjct: 183 IADADCSLCGQCITHCPVGALRERDDTEKF--------WRAVANPD-KVVVVQVAPAIRT 233
Query: 127 SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---GG 182
+ G L + V K+ KR+G D V D + +++E EF++RF G
Sbjct: 234 AWGEHIGLDLKDASVNKIFDALKRIGADYVFDTAFSADLTIMEEAYEFIERFSKGELKDK 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CPGWV + KS ++ ++S KSP Q+ G+++K++ AEK+G P I+ V +
Sbjct: 294 PMFTSCCPGWVRFI-KSQYPHLVSHLSSAKSPMQMFGAVMKSYFAEKIGKKPEDIFSVAI 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL--ANELATTTLQEEKDGILDWP 300
MPC KK E S FY E G+ D+DCV+T E ++ A+ L T + E D +
Sbjct: 353 MPCVAKKGEISMELFYGEYAGH-DMDCVLTTREFVRMIKSAHILPETLKETEPDKLF--- 408
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-----IREATF 355
H+ ++ G +GG L A + P FK +R+ I EA+F
Sbjct: 409 ---HDASGAGIIFG-ATGGVMEAALRTAYYAIMGKNCPPDAFKVVRHSSQEESGIIEASF 464
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
T + LR + +G N + LI ++ YDF+EIMACP GC+ GG Q +E
Sbjct: 465 TLKENNLRIAVTSGLANTRRLIDSIEAGEKHYDFVEIMACPGGCVGGGGQPIHESGELAV 524
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ L I + EN ++ LY + ++ K +L+T +
Sbjct: 525 KRGSNLYFIDKNSKVRYSHENECIKALYNDFFEKPNSHKAHSLLHTDH 572
>gi|168186810|ref|ZP_02621445.1| hydrogenase [Clostridium botulinum C str. Eklund]
gi|169295206|gb|EDS77339.1| hydrogenase [Clostridium botulinum C str. Eklund]
Length = 579
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 187/405 (46%), Gaps = 33/405 (8%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+CL C C+ +++ H V++ I H +++++A S+
Sbjct: 194 TNCLLCGQCVNICPVAALSETPHINRVLEAIDNPKKH----------VIVAIAPSVRASI 243
Query: 129 GAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + + V KL ++LG D + D+ ++VE NE ++R + G P+FT
Sbjct: 244 GEAFNMGYGTDVTGKLYTVLRQLGFDKIFDLNFGADLTIVEEANELVERIKNNGPYPMFT 303
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV AE ++ + +LP +S KSPQQ+ G+ KT+ + + + P I+ VT+MPC
Sbjct: 304 SCCPAWVRQAE-NYFKNLLPNLSSTKSPQQIFGAASKTYYPKLINLDPKDIFTVTVMPCT 362
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHN 305
KK E+ R + G +D V+TA EL +++ N++ L+ DG+ D E++
Sbjct: 363 AKKFESQRDGM--DIKGISSIDAVLTARELVKIIKDNKIDFPNLE---DGVQDPAMGEYS 417
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRF 364
L GT +GG + A L +E+K +R I+E T T D
Sbjct: 418 GAGALF--GT-TGGVMEAAIRTAKELLENKSLNNIEYKEVRGFKGIKETTVTINDKEYNI 474
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-----IRNEKVASPKETAL 419
+ NG N+ + + Y FIE+M+C GC+NGG E V K A
Sbjct: 475 AVINGSSNVFKFMNSDMINKKQYHFIEVMSCEGGCINGGGHPHVTPSERETVDYKKLRAS 534
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
L +L K + EN + +Y ++G G H+ + +H
Sbjct: 535 VLYNKDLNLPKRKSHENTAIIKMYDNFIG----KPGNHLAHEIFH 575
>gi|42527101|ref|NP_972199.1| Fe-hydrogenase [Treponema denticola ATCC 35405]
gi|449102574|ref|ZP_21739322.1| hydrogenase, Fe-only [Treponema denticola AL-2]
gi|449111837|ref|ZP_21748406.1| hydrogenase, Fe-only [Treponema denticola ATCC 33521]
gi|449113356|ref|ZP_21749861.1| hydrogenase, Fe-only [Treponema denticola ATCC 35404]
gi|41817525|gb|AAS12110.1| Fe-hydrogenase [Treponema denticola ATCC 35405]
gi|448957108|gb|EMB37861.1| hydrogenase, Fe-only [Treponema denticola ATCC 33521]
gi|448959566|gb|EMB40285.1| hydrogenase, Fe-only [Treponema denticola ATCC 35404]
gi|448966163|gb|EMB46821.1| hydrogenase, Fe-only [Treponema denticola AL-2]
Length = 596
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 190/408 (46%), Gaps = 29/408 (7%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I+ DC C CIT + ++ E +A +N + K +V+ +A
Sbjct: 183 IADADCSLCGQCITHCPVGALRERDDTEKF--------WRAVANPD-KVVVVQVAPAIRT 233
Query: 127 SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---GG 182
+ G L + V K+ KR+G D V D + +++E EF++RF G
Sbjct: 234 AWGEHIGLDLKDASVNKIFDALKRIGADYVFDTAFSADLTIMEEAYEFIERFSKGELKDK 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CPGWV + KS ++ ++S KSP Q+ G+++K++ AEK+G P I+ V +
Sbjct: 294 PMFTSCCPGWVRFI-KSQYPHLVSHLSSAKSPMQMFGAVMKSYFAEKIGKKPEDIFSVAI 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL--ANELATTTLQEEKDGILDWP 300
MPC KK E FY E G+ D+DCV+T E +L A+ L T + E D +
Sbjct: 353 MPCVAKKSEIDMELFYGEYAGH-DMDCVLTTREFVRMLKSAHILPETLKETEPDKLF--- 408
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-----IREATF 355
H+ ++ G +GG L A + P FK +R+ I EA+F
Sbjct: 409 ---HDASGAGIIFG-ATGGVMEAALRTAYYAIMGKNCPPDAFKVVRHSSQEESGIIEASF 464
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
T + LR + +G N + LI ++ YDF+EIMACP GC+ GG Q +E
Sbjct: 465 TLKENNLRIAVTSGLANTRRLIDSIEAGEKHYDFVEIMACPGGCVGGGGQPIHESGELAV 524
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ L I + EN ++ LY + ++ K +L+T +
Sbjct: 525 KRGSNLYFIDKNSKVRYSHENECIKALYNDFFEKPNSHKAHSLLHTDH 572
>gi|392395414|ref|YP_006432016.1| hydrogenase, Fe-only [Desulfitobacterium dehalogenans ATCC 51507]
gi|390526492|gb|AFM02223.1| hydrogenase, Fe-only [Desulfitobacterium dehalogenans ATCC 51507]
Length = 527
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 206/440 (46%), Gaps = 57/440 (12%)
Query: 52 IQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNE 111
IQ G E K +I C+ C CI S I+++ E+ KV+ KA S+
Sbjct: 98 IQSVYGNYELPIKNDIV---CIHCGQCIHWCPSGAISER--EDSDKVL------KALSDP 146
Query: 112 NTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELE 170
N T+V+ A + LG +F + V K + LG D++ D +++E
Sbjct: 147 NI-TVVVQTAPATRIGLGEEFGMPVGTNVQGKQVAALRELGFDVIFDTNFTADLTIMEEG 205
Query: 171 NEFLDRF---LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA 227
+E + R L P TS CPGWV + E + + I P +S KSPQQ+ G+L+KT+ A
Sbjct: 206 SELVKRITGELHHPLPQLTSCCPGWVKFVEYFYPDLI-PNLSSAKSPQQMEGALVKTYFA 264
Query: 228 EKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYR------DVDCVITAVELEVLLA 281
EK + P ++ V +MPC KK E R + + + + DVD V+T EL ++
Sbjct: 265 EKNTIDPKTVFSVAIMPCTAKKFECQRPEMISAQTYLKDKHVSPDVDVVLTTRELARMI- 323
Query: 282 NELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPG 335
K +D+P + L+ GTG+G G V+ A+R L G
Sbjct: 324 -----------KRAGIDFPSLPDEEYDQLMGIGTGAGAIFGTTGGVMEAAVRSAYYLITG 372
Query: 336 ESP---VVEFKPLRNPD-IREATFT---CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYD 388
+ P + + P+R + ++EA+ GDV + + +G N + ++++++ P+
Sbjct: 373 QQPPSALWQLAPVRGMEGVKEASVPIPGAGDV--KIAVISGLDNARKIMEQVRAGNSPWA 430
Query: 389 FIEIMACPSGCLNGGAQIRNEKVASPKE-----TALELETILCDLAKSEPRENATLEHLY 443
FIE+MACP GC GG Q R+ A P + A L I + +N ++ +Y
Sbjct: 431 FIEVMACPGGCQYGGGQPRSS--APPSDGVRNTRAASLYKIDANAKLRNSHDNPQIKQVY 488
Query: 444 KAWLGGKSTDKGKHMLNTSY 463
+ +L ++K + +L+T Y
Sbjct: 489 EDFLTSPLSEKAEELLHTHY 508
>gi|374815068|ref|ZP_09718805.1| hydrogenase, Fe-only [Treponema primitia ZAS-1]
Length = 570
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 190/398 (47%), Gaps = 44/398 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTK-TIVLSLAIQPV 125
I + C+ C C + IT ++ + + A + NTK T+ ++ A++
Sbjct: 186 IGKSPCVGCGQCAAVCPTGAITVRNDTDKI--------WAALDDRNTKVTVQIAPAVRVA 237
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--- 182
++ FA E + + +R+G D + D +++E NEFL R +G G
Sbjct: 238 VTREFGFA-RRENAIGLIVAALRRMGFDEIYDTATGADITVLEEANEFLKRVENGEGGGM 296
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CP W+ + EK + E +LP+IS +SP Q+ ++I+ L H+ HV +
Sbjct: 297 PLFTSCCPAWIQFVEKKYPE-LLPHISTCRSPMQMFAAVIREE--SNLATSKPHV-HVAV 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPW 301
MPC KK EA+R +F G VD VIT EL +++ + + TTLQ E +D P+
Sbjct: 353 MPCTAKKFEAARDEFKVN--GKPQVDYVITTQELIKMIRESGIIMTTLQPEA---VDMPF 407
Query: 302 DEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATF 355
++G G SGG VL G + + +R + ++ T
Sbjct: 408 GT--------ISGAGVIFGVSGGVTEAVLRRVTTDKSAGTLMSLGWTGVRGMEGLKTTTI 459
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVA 412
GD L+ I +G +N +LI+++K YDF+E+M+CP GC++G Q EK++
Sbjct: 460 PFGDKQLKIAIVSGLKNTADLIERIKSGEEHYDFVEVMSCPGGCVSGAGQPSVGWEEKLS 519
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGK 450
+ L LC++ +SE EN + LY L GK
Sbjct: 520 --RGQGLYAADKLCNVKRSE--ENPLMIELYGGLLKGK 553
>gi|342308691|gb|AEL20818.1| HndA1 [Treponema primitia ZAS-1]
Length = 579
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 190/398 (47%), Gaps = 44/398 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTK-TIVLSLAIQPV 125
I + C+ C C + IT ++ + + A + NTK T+ ++ A++
Sbjct: 195 IGKSPCVGCGQCAAVCPTGAITVRNDTDKI--------WAALDDRNTKVTVQIAPAVRVA 246
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--- 182
++ FA E + + +R+G D + D +++E NEFL R +G G
Sbjct: 247 VTREFGFA-RRENAIGLIVAALRRMGFDEIYDTATGADITVLEEANEFLKRVENGEGGGM 305
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CP W+ + EK + E +LP+IS +SP Q+ ++I+ L H+ HV +
Sbjct: 306 PLFTSCCPAWIQFVEKKYPE-LLPHISTCRSPMQMFAAVIREE--SNLATSKPHV-HVAV 361
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPW 301
MPC KK EA+R +F G VD VIT EL +++ + + TTLQ E +D P+
Sbjct: 362 MPCTAKKFEAARDEFKVN--GKPQVDYVITTQELIKMIRESGIIMTTLQPEA---VDMPF 416
Query: 302 DEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATF 355
++G G SGG VL G + + +R + ++ T
Sbjct: 417 GT--------ISGAGVIFGVSGGVTEAVLRRVTTDKSAGTLMSLGWTGVRGMEGLKTTTI 468
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVA 412
GD L+ I +G +N +LI+++K YDF+E+M+CP GC++G Q EK++
Sbjct: 469 PFGDKQLKIAIVSGLKNTADLIERIKSGEEHYDFVEVMSCPGGCVSGAGQPSVGWEEKLS 528
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGK 450
+ L LC++ +SE EN + LY L GK
Sbjct: 529 --RGQGLYAADKLCNVKRSE--ENPLMIELYGGLLKGK 562
>gi|110801841|ref|YP_698262.1| periplasmic [Fe] hydrogenase 1 [Clostridium perfringens SM101]
gi|110682342|gb|ABG85712.1| [Fe] hydrogenase [Clostridium perfringens SM101]
Length = 696
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 199/425 (46%), Gaps = 35/425 (8%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C + IT EV + +A N+ K +++S + +SLG +
Sbjct: 58 CINCGQCANVCPTSSIT-----EVFDYKKVEDA----INDKDKIVIVSTSPAVRVSLGEE 108
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTSE 188
F + V K+ ++LG VLD A ++VE +E ++R PL FTS
Sbjct: 109 FNMDDGSFVQGKMIALLRKLGFKYVLDTNFAADMTIVEEASELVERITKNNKPLPQFTSC 168
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP W+ YAE H E IL +IS KSP + G IKT+ A+ +G+ PS I +V L PC K
Sbjct: 169 CPAWIKYAETFHPE-ILDHISTSKSPIGMQGPTIKTYFAKNMGIDPSKIINVALTPCTAK 227
Query: 249 KLEASRAD------FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
K E R + +Y E RD+D VIT E+ + A E +D D
Sbjct: 228 KFEIKREEMNASGRYYGIE-DMRDMDYVITTREV-AIWAKEKGID-FNSLEDSNFDKLMG 284
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRN-PDIREATFTCGD 359
E + ++ N +GG L A + + E P + + +R DIREA+F D
Sbjct: 285 EASGAGVIFAN---TGGVMEAALRTAYKYITKKEPPKDFYDLEAVRGMEDIREASFKIND 341
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
+ + + G N I K+K Y F+E+M CP GC+ GG Q +++ + K
Sbjct: 342 LDINVAVIYGTENASKFISKMKDSDKKYHFVEVMTCPGGCIGGGGQPKDKNLQGDKLREK 401
Query: 420 ELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN----NIA 472
++ + + + + EN +++LYK + G +D + ML+T+Y + + N++
Sbjct: 402 RIDGLYRRDSSMKLKVSCENEEIKNLYKEFYGKPLSDLAEKMLHTTYSDRSSDLGGENMS 461
Query: 473 LNVKW 477
+VK+
Sbjct: 462 ESVKY 466
>gi|386347238|ref|YP_006045487.1| hydrogenase, Fe-only [Spirochaeta thermophila DSM 6578]
gi|339412205|gb|AEJ61770.1| hydrogenase, Fe-only [Spirochaeta thermophila DSM 6578]
Length = 583
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 196/434 (45%), Gaps = 69/434 (15%)
Query: 66 EISLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
+I+L D C+ C C +H V + +++ K I + I
Sbjct: 183 DIALNDSPCIKCGQC-----------SAHCPVGAIYEKDDTRKVWEAIMDPEIHTVVQIA 231
Query: 124 PVLSLGAKFALSHEQ---VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
P + + A +E + K +RLG D + D A +++E +EF++RF G
Sbjct: 232 PAVRVAIGEAFGYEPGTLLTGKTYAALRRLGFDAIFDTNFAADLTIMEEASEFVERFAHG 291
Query: 181 GGP--LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
GP L T+ CP WV Y EK + E I P+ S KSPQ ++ +++KT+ A+K G+ PS I+
Sbjct: 292 KGPIPLITTCCPSWVDYLEKYYPEMI-PHFSSAKSPQMMLAAMVKTYYAQKKGIDPSKIF 350
Query: 239 HVTLMPCYDKKLEASR-ADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL 297
V++MPC KK E R + Y+ GY+D D IT EL ++ + A D
Sbjct: 351 MVSVMPCTSKKYEIERDENMYSS--GYKDQDASITTRELARMIKS--AGIDFHNLPDEEA 406
Query: 298 DWPWDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQ----LCPGESPVVEFKPLRNPD-IR 351
D P + + G G+ G V+ A+R + E VE+ P+R D ++
Sbjct: 407 DQP--------LGIYTGAGTIFGVTGGVMEAAVRTVYYFITGKEMEKVEYTPIRGLDGVK 458
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKR-----KRLPYDFIEIMAC----------P 396
EAT +R +A+ N+Q ++ ++K+ K PY FIE+MAC P
Sbjct: 459 EATLDIDGTQVRIAVAHSISNVQYVLDRVKQALQEGKEPPYHFIEVMACRGGCVGGGGQP 518
Query: 397 SGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTD 453
G + +IR ++ A I D +S R +N ++ LY+ +L ++
Sbjct: 519 YGATD---EIRAKRAAG----------IYTDDERSVYRCSHQNPAIKQLYEEFLEKPLSE 565
Query: 454 KGKHMLNTSYHNIP 467
K L+T Y P
Sbjct: 566 KAHKYLHTHYTARP 579
>gi|392404280|ref|YP_006440892.1| hydrogenase, Fe-only [Turneriella parva DSM 21527]
gi|390612234|gb|AFM13386.1| hydrogenase, Fe-only [Turneriella parva DSM 21527]
Length = 583
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 183/367 (49%), Gaps = 30/367 (8%)
Query: 117 VLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
V+ +A +++G +F + KL +RLG D V D + +++E NEF++
Sbjct: 227 VVQIAPSVRVAIGEEFGYEPGTNLTGKLYAALRRLGFDAVFDTNFSADVTIMEEANEFVE 286
Query: 176 RFLSGGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
RF G PL TS CP W Y EK H +FI P S KSPQQ+MG L KT+ A+K+ +
Sbjct: 287 RFKHGKRELPLITSCCPSWTDYMEKLHSDFI-PNFSSTKSPQQIMGVLAKTYYAQKMNID 345
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK 293
P+ + V++MPC KK E +R D G++DVD V+T EL ++ +
Sbjct: 346 PAGMRMVSIMPCTAKKYEITR-DHEMFASGFKDVDVVLTTRELARMI------------R 392
Query: 294 DGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGES-PVVEFKPLR 346
+D+ + + L + +G+G G V+ A+R + GE P + F+ +R
Sbjct: 393 QAGIDFRHLQDHKADSFLGSYSGAGTMFGTTGGVMEAALRTAQFILTGEKMPKLVFEEIR 452
Query: 347 NPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRL-----PYDFIEIMACPSGCL 400
+ I+E +R +A+G ++ ++++++R + PY FIE+MACP GC+
Sbjct: 453 GLEGIKETKVVIAQEEIRIAVAHGLGHVGEVLERVRRAKATGEEPPYHFIEVMACPGGCI 512
Query: 401 NGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
GG Q A K+ L D A +NA ++ +Y +L ++K +L+
Sbjct: 513 GGGGQPYRVTDAIRKKRMQGLFADDRDKAVRCSHDNAEVQQVYNEFLEKPLSEKAHRLLH 572
Query: 461 TSYHNIP 467
T+YH P
Sbjct: 573 TTYHARP 579
>gi|436842483|ref|YP_007326861.1| Periplasmic [Fe] hydrogenase large subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432171389|emb|CCO24762.1| Periplasmic [Fe] hydrogenase large subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 459
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 206/464 (44%), Gaps = 55/464 (11%)
Query: 25 CIKPIPIEKPSG----PRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCIT 80
C + P+E SG P + R G IQ + L++ + L + L G
Sbjct: 21 CKEVCPVEAISGVQGEPHSIDHARCVICGQCIQTCSAYGSILEEPDTPLAEKLHERGMFR 80
Query: 81 SAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVV 140
S E L +V++E + K S ++ A ++G F + +
Sbjct: 81 SVEEPLFAAYCTGNAPEVMKELRSDKLS--------LVQCAPAVRTAIGEDFGMPAGSLT 132
Query: 141 -AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEK 198
K+ +RLG D V D A +++E NE L R +G P+FTS CP WV + E
Sbjct: 133 PGKMAAALRRLGFDRVYDTNFAADLTIMEEGNELLSRISNGETLPMFTSCCPAWVRFMEL 192
Query: 199 SHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFY 258
++ + +L ++S KSPQQ+ G+L KT+ A+ P I+ V++MPC KK E+SR +
Sbjct: 193 NYPD-LLGHLSSCKSPQQMSGALFKTYGADIDNRKPEEIFSVSVMPCTCKKYESSRPEMK 251
Query: 259 NEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGS 317
N G RDVD VIT EL ++ + TTL E D P + TG+
Sbjct: 252 NN--GLRDVDAVITTRELGYMIKEAGIDFTTLPAED---FDRPLGTY----------TGA 296
Query: 318 G---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI---------REATFTCGDVTLRFC 365
G G V+ A+R C +V KP+ D+ R A+ T R
Sbjct: 297 GNIFGVTGGVMEAALRTACE----LVTGKPVPETDLIFVRGEAGMRTASMDMNGTTFRVA 352
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR------NEKVASPKETAL 419
+ G N L++K++ + DF+E+M CPSGC++GG Q + E V ++ ++
Sbjct: 353 VVAGLTNAIALLEKVRTGKAEVDFVEVMCCPSGCISGGGQPKVLLPADRENVYRCRKQSM 412
Query: 420 ELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ KS EN ++ +Y +LG +L+TSY
Sbjct: 413 YSHDQNIKIRKSH--ENPDVQKVYADFLGEPLGHTSHKLLHTSY 454
>gi|402311623|ref|ZP_10830561.1| [FeFe] hydrogenase, group A [Lachnospiraceae bacterium ICM7]
gi|400371573|gb|EJP24531.1| [FeFe] hydrogenase, group A [Lachnospiraceae bacterium ICM7]
Length = 573
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 165/340 (48%), Gaps = 28/340 (8%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I DC C CIT ++++ + + + + KT+V+ +A
Sbjct: 182 KIEEADCSLCGQCITHCPVGALSERD---------DTSKFWEAVADPEKTVVVQIAPAVR 232
Query: 126 LSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGG 181
+ G F L + V K+ K++G D V D + +++E NEF+ R+ L G
Sbjct: 233 TAWGEVFGLKDKDATVGKIVDALKKMGADYVFDTSFSADLTIMEEANEFVHRYTNGLIGD 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS + +S KSPQQ+ G+++K++ AEK+GV P ++ V+
Sbjct: 293 RPMFTSCCPGWVRFV-KSQYPRMTKSLSTAKSPQQMFGAVMKSYFAEKIGVKPENMVSVS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWP 300
+MPC KK E F+ E G+ DVD +T EL ++ A+ + +L+ D + D P
Sbjct: 352 IMPCVAKKGEREMELFHGEYAGH-DVDIALTTRELTRMIRASHIDPKSLE---DVVADRP 407
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR------NPDIREAT 354
+++ ++ +GG L A + P FKP+R N EA
Sbjct: 408 MGDYSGAGVIF---GATGGVMEAALRTAYSIIKKENPPADAFKPVRSKAFQENDGTVEAK 464
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMA 394
F D+ L + +G N + LI K++R YDF+E+MA
Sbjct: 465 FKIDDIELNIAVVSGLGNTRKLINKIERGEAKYDFVEVMA 504
>gi|325262544|ref|ZP_08129281.1| putative [Fe] hydrogenase, large subunit HymC [Clostridium sp. D5]
gi|324032376|gb|EGB93654.1| putative [Fe] hydrogenase, large subunit HymC [Clostridium sp. D5]
Length = 562
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 168/349 (48%), Gaps = 32/349 (9%)
Query: 66 EISLTDCLACSGCITSAESVLIT-QQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+++ TDC+ C C + IT +Q+ E V + + N +V+ +A
Sbjct: 182 DLAQTDCVGCGQCRAVCPTGAITIKQNVEPVWHALCDKNTR----------VVVQIAPAV 231
Query: 125 VLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+++G KF + E V+ +L +R+G D V D +++E E L+R SG
Sbjct: 232 RVAIGDKFGIKKGENVLGRLVAALRRIGFDEVYDTNFGADLTVMEESKELLERLESGENL 291
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CP WV + EK + EF IS +SPQ++ G+LIK K +++
Sbjct: 292 PLFTSCCPAWVKFCEKKYPEF-RKNISSCRSPQEMFGALIKEEARMKAEEDTRKTMVISI 350
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK E +R + + + G ++VD V+T E+ ++ + A L + K LD P+
Sbjct: 351 MPCTAKKAEITRPEHFTD--GEQNVDYVLTTTEVTRMI--QEAGIDLAQVKPEALDMPFG 406
Query: 303 EHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFT 356
L +G G +GG VL + + + F +R D I+EA
Sbjct: 407 --------LSSGAGAIFGVTGGVTEAVLRRLVNSNRSEDLEAISFTGVRGVDGIKEAKVK 458
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
GD ++ + NG ++ ++ K+K + YDF+E+MAC GC+ GG Q
Sbjct: 459 LGDREVKIAVVNGLKSASEVLDKMKAGEVYYDFVEVMACKRGCIAGGGQ 507
>gi|402847751|ref|ZP_10896023.1| Periplasmic [Fe] hydrogenase large subunit [Rhodovulum sp. PH10]
gi|402501986|gb|EJW13626.1| Periplasmic [Fe] hydrogenase large subunit [Rhodovulum sp. PH10]
Length = 623
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 221/490 (45%), Gaps = 56/490 (11%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAK-------IRIQDDG----AYI 52
++F G+ Q + F P++ +P+ P+ R + I I DG A I
Sbjct: 139 AQFVGLTQ----NRFFDPARVAARPVDDSSPALIRNMQRCIRCQRCIAICRDGQGVDALI 194
Query: 53 QETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNEN 112
Q +G E + + LT S C+T + VL+ + + +A
Sbjct: 195 QTGSGLETAVG-LRYGLTQ--KNSACVTCGQCVLVCPTG-----ALGERDETDRALEMMY 246
Query: 113 TKTIVLSLAIQPVL--SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVEL 169
++ + P + G +F L V ++ + LG D+VLD ++E
Sbjct: 247 DPELITVVQFAPAVRVGFGEEFGLPPGTNVEGQIITALRMLGADIVLDTNWGADLVIMEE 306
Query: 170 ENEFLDRFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK 229
E L R P F+S CP W+ + E+ H I+P +S KSPQQ +G+L KT+L EK
Sbjct: 307 GTELLHRLKKKQRPTFSSCCPAWINFVER-HYPDIIPMLSSTKSPQQCVGTLAKTYLPEK 365
Query: 230 LGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTL 289
+G+ P I +++MPC KK E +R ++ G +VD V++ E LL E
Sbjct: 366 MGIDPKKIRVISVMPCIAKKDEIARRQLSHD--GVPEVDVVLSTREFARLLQREHIDLKS 423
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLC----PGESPVVEFKP 344
E P NP+ M +G G+ G V+ AIR + E VE +
Sbjct: 424 LE--------PSGFDNPY-MSEYSGAGAIFGTTGGVMEAAIRTMYFVVNGKELEHVEIEE 474
Query: 345 LRNPD-IREATFT----CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
LR + +R AT GDV + C +G + + +++ ++ + DFIEIMACP GC
Sbjct: 475 LRGFEGVRTATVALGGEIGDVKIAMC--HGLKPTRQIVELVRSGKSDLDFIEIMACPGGC 532
Query: 400 LNGGAQIRNEKVASPKETALELETILCDL----AKSEPRENATLEHLYKAWLGGKSTDKG 455
++GG +R++K P AL+ L + A + N ++ LY+ +LG ++K
Sbjct: 533 VDGGGTLRSKKAYLPH--ALKRRETLFGIDRKKAVRQSHRNEQVQALYRDYLGEPDSEKA 590
Query: 456 KHMLNTSYHN 465
H+L+T Y +
Sbjct: 591 HHLLHTWYTD 600
>gi|392392257|ref|YP_006428859.1| hydrogenase, Fe-only [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523335|gb|AFL99065.1| hydrogenase, Fe-only [Desulfitobacterium dehalogenans ATCC 51507]
Length = 575
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 198/436 (45%), Gaps = 45/436 (10%)
Query: 43 IRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRE 101
I I GA+ T EE L S C+ C CI L + ++V + +
Sbjct: 166 IEIAQRGAHTTVTTPYEEAL-----SGRSCINCGQCIKICPVGALQERDDSDKVWSALED 220
Query: 102 NNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGI 160
H +V+ A ++LG +F L V K+ +RLG D V D
Sbjct: 221 PELH----------VVVQTAPAVRVALGEEFGLPVGINVRGKMVTALRRLGFDKVFDTTF 270
Query: 161 AHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMG 219
+ +++E E L R GG PL TS PGWV + E + +F L +S KSPQQ+ G
Sbjct: 271 SADLTIMEEGTELLQRIQQGGKLPLITSCSPGWVKFCEHNFTDF-LDNLSSCKSPQQMFG 329
Query: 220 SLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVL 279
++ K++ +K G+ P I+ V++MPC KK EA R + + G +DVD VIT EL +
Sbjct: 330 AVAKSYYPQKAGLDPKKIFVVSVMPCTAKKYEADREEMMVQ--GRKDVDAVITTRELAKM 387
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHN---VLSHAIRQ----L 332
+ K +++ E + + LL TG+G N V+ A+R L
Sbjct: 388 I------------KQAGINFNDLEDSEYDELLGTSTGAGVIFANTGGVMEAALRTVADIL 435
Query: 333 CPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIE 391
+ +E+ +R + I+EAT + ++ + +G N L+ +++ Y FIE
Sbjct: 436 TGQDLEAIEYSAVRGFEGIKEATVHIDGLEIKAAVVHGTGNAAQLLDRIREGTANYHFIE 495
Query: 392 IMACPSGCLNGGAQ-IRNEKVASPKETALELETILC---DLAKSEPRENATLEHLYKAWL 447
+M CP GC+NGG Q I +K + + L I K + EN ++ +Y+ +L
Sbjct: 496 VMGCPGGCINGGGQPILMDKSRTQEVNRLRAAGIYALDRQAVKRKSHENPEIKKIYEEYL 555
Query: 448 GGKSTDKGKHMLNTSY 463
+ + +L+T Y
Sbjct: 556 EKPGSHRSHELLHTHY 571
>gi|164686674|ref|ZP_02210702.1| hypothetical protein CLOBAR_00269 [Clostridium bartlettii DSM
16795]
gi|164604064|gb|EDQ97529.1| hydrogenase, Fe-only [Clostridium bartlettii DSM 16795]
Length = 455
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 184/419 (43%), Gaps = 68/419 (16%)
Query: 17 DFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACS 76
D QEC+K P+ +G E K EI C+ C
Sbjct: 8 DLCTGCQECVKVCPVSAITG-----------------------EPHKPQEIDADKCVICG 44
Query: 77 GC----------ITSAESVLITQQSHEEVMKVIRE-----NNAH-----KASSNENTKTI 116
C I E + ++ ++ VI E NN KA+ + +K
Sbjct: 45 QCVQVCKSYASIIDHGEEFVTNKKQERKIPDVINEPLFAANNVCDIDKVKAALKDPSKIT 104
Query: 117 VLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
++ A ++LG F + + K+ K L D + D A +++E NE +
Sbjct: 105 MVQCAPAVRVALGEDFGMELGSLTPGKMAAALKALNFDKIYDTNFAADLTIMEEGNELIK 164
Query: 176 RFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
R GG P+FTS CP WV + E + E + ++S KSPQQ+ G++ KT+ A+ +
Sbjct: 165 RVTEGGTLPMFTSCCPAWVKFLETNFPE-LTDHLSSCKSPQQMAGAVFKTYGAKVNKIDA 223
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKD 294
IY +++MPC KK E R + + GYRDVD V+T EL L+ KD
Sbjct: 224 KDIYSISIMPCTCKKFECDRPEM--DSSGYRDVDAVLTTRELAYLI------------KD 269
Query: 295 GILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRN 347
+D+ E P L TG+G G V+ A+R ++ GE P ++ +R
Sbjct: 270 AGIDFNSLEEIPFESPLGVYTGAGTIFGVTGGVMEAALRTAYEVITGEEIPSIDIPAVRG 329
Query: 348 PD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
D R G++TL+ + G +N+ +++ LK +L FIE+M CP GC++GG Q
Sbjct: 330 RDGFRTTEVQIGELTLKVGVVTGLKNVVPILEDLKSGKLDLHFIEVMTCPVGCVSGGGQ 388
>gi|397906372|ref|ZP_10507181.1| Periplasmic [Fe] hydrogenase large subunit [Caloramator australicus
RC3]
gi|397160592|emb|CCJ34518.1| Periplasmic [Fe] hydrogenase large subunit [Caloramator australicus
RC3]
Length = 579
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 188/402 (46%), Gaps = 28/402 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T C C C++ + +T+ S+ V KV + ++ K ++ A ++LG
Sbjct: 192 TQCTFCGQCVSVCPTAALTEVSY--VAKVWE-------ALHDPDKFVIAQTAPAIRVALG 242
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFT 186
+F L +V K+ +RLG V D A ++VE EF++R L G G P+ T
Sbjct: 243 EEFGLEPGTIVTGKMVAALRRLGFRKVFDTDFAADVTIVEEAKEFIER-LKGKGRLPILT 301
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV + E E +L S KSP + G++ KT+ AEK + P I V++MPC
Sbjct: 302 SCCPSWVKFIEHQFPE-LLDIPSTCKSPHMMFGAIAKTYFAEKFNIPPEKIVVVSVMPCI 360
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R +F EE G ++VD VIT E ++ T +D D P E
Sbjct: 361 AKKYEIQRKEF--EENGIKNVDYVITTREFAKMIREAGIDFTKLPNED--FDDPLGESTG 416
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD--IREATFTCGDVTLRF 364
++ +GG L A + VEF +R + ++EAT D+ L+
Sbjct: 417 ASVIF---GVTGGVIEAALRTAYEWITGETLEKVEFHGVRGLEDGLKEATVKIKDMELKI 473
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETALEL 421
+A+G N + L++ ++ + Y IEIMACP GC++GG Q N + + A+
Sbjct: 474 GVAHGLGNARRLLEDIRDGKRFYHAIEIMACPGGCIDGGGQPYHHGNLDIVRARLNAIYE 533
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E + KS EN + +YK ++G +K +L+T Y
Sbjct: 534 EDRNKPIRKSH--ENPAVIAMYKEYMGEIGGEKAHKLLHTHY 573
>gi|325290297|ref|YP_004266478.1| hydrogenase, Fe-only [Syntrophobotulus glycolicus DSM 8271]
gi|324965698|gb|ADY56477.1| hydrogenase, Fe-only [Syntrophobotulus glycolicus DSM 8271]
Length = 525
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 199/423 (47%), Gaps = 56/423 (13%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C S IT++ +E+ KV++ + + T+V+ A + LG +
Sbjct: 115 CVNCGQCTHWCPSGAITEK--DEIDKVLQ-------AIEDPEITVVVQTAPATRVGLGEE 165
Query: 132 FALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLFTS 187
F + V K ++LG D + D +++E E + R L+ P TS
Sbjct: 166 FGMPIGTNVEGKQVAALRKLGFDTIFDTTFTADLTIMEEGTELVKRVTGELNKPTPQLTS 225
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV + E + + I P +S KSPQQ+ G+LIKT+ A+ + P I+ V++MPC
Sbjct: 226 CCPGWVKFVEYFYPDLI-PNLSSAKSPQQMAGALIKTYFAKTQKIDPEKIFSVSIMPCTA 284
Query: 248 KKLEASRADFYNEELGYR------DVDCVITAVELEVLLANE-LATTTLQEEKDGILDWP 300
KK EA R++F + + ++ DVD V+T EL ++ + + +LQ+EK
Sbjct: 285 KKFEAQRSEFSSADKEFKDSKATADVDVVLTTKELAKMIKKKGIDFASLQDEK------- 337
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESP---VVEFKPLRN-PDI 350
+ L+ GTG+G G V+ AIR L ++P + P+R +
Sbjct: 338 ------YDKLMGEGTGAGVIFGATGGVMEAAIRSVYYLVTKQAPPAALWNLTPVRGLTGV 391
Query: 351 REATFTC---GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR 407
+EA+ GDV + + +G N + ++ ++K + FIE+MACP GC GG Q R
Sbjct: 392 KEASVNIPGLGDV--KVAVISGLANARKVMDQVKAGNASWAFIEVMACPGGCQYGGGQPR 449
Query: 408 NEKVASPKET-----ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTS 462
A P +T + L T+ + EN + +YK +L + + +L+T
Sbjct: 450 --AAAPPSDTIRTQRSNSLYTLDKNAKVRNSHENTEITQIYKDYLHAPMSHLAEEILHTE 507
Query: 463 YHN 465
Y +
Sbjct: 508 YES 510
>gi|260892206|ref|YP_003238303.1| hydrogenase, Fe-only [Ammonifex degensii KC4]
gi|260864347|gb|ACX51453.1| hydrogenase, Fe-only [Ammonifex degensii KC4]
Length = 549
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 204/444 (45%), Gaps = 58/444 (13%)
Query: 52 IQETNGREEKLKKVEISLTDCLACS-GCITSAESVLITQQSHEEVMKVIRENNAHKASSN 110
+Q G E + +I +C CS C T A + + E+V+K +++ N
Sbjct: 101 VQSVYGYYELPIRDDIVCINCGQCSLACPTGA---IQERDDTEKVLKALKDPN------- 150
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHCFSLVEL 169
K +V+ A ++LG +F + VA K+ +RLG + VLD A +++E
Sbjct: 151 ---KFVVVQTAPSIRVALGEEFGMPPGTWVAGKMVAALRRLGFNAVLDTNFAADLTIMEE 207
Query: 170 ENEFLDRFLS--GGGPL--FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
E + R G PL FTS PGWV + E + + I P++S KSPQQ+ G+ +KT+
Sbjct: 208 ATELIKRIKGELPGRPLPQFTSCSPGWVKFCEYFYPDLI-PHLSSCKSPQQMFGATVKTY 266
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGY------------RDVDCVITA 273
AEK G+ P I V++MPC KK EA R + + + + RDVD V+T
Sbjct: 267 YAEKRGIDPRKIVSVSIMPCTAKKFEAQRPEMISAKKYWEKKDPKIAEGVTRDVDIVLTT 326
Query: 274 VELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR 330
EL L+ K +D+P L+ TG G + V+ AIR
Sbjct: 327 RELAKLI------------KQAKIDFPRLPDEDFDPLMGKCTGGAIIFGASGGVMEAAIR 374
Query: 331 Q---LCPGESP---VVEFKPLRN-PDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKR 382
G+ P +++ KP+R ++EA G T+R + G + ++ ++
Sbjct: 375 TAYFFITGKEPPQQLLDLKPVRGLASVKEAAVDIPGAGTIRVAVCQGMAASRQVLDIVRA 434
Query: 383 KRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAK---SEPRENATL 439
+ P+ F+E MACP GC +GG Q R+ + + A ++ A+ E EN +
Sbjct: 435 GKAPWHFVEFMACPGGCESGGGQPRSSVPQANEVRAKRTASLYAADARWVWRESHENPDI 494
Query: 440 EHLYKAWLGGKSTDKGKHMLNTSY 463
+Y+ + G ++ + +L+T Y
Sbjct: 495 LKVYQDFYGHPMSELAEELLHTHY 518
>gi|449120015|ref|ZP_21756402.1| hydrogenase, Fe-only [Treponema denticola H1-T]
gi|449122412|ref|ZP_21758752.1| hydrogenase, Fe-only [Treponema denticola MYR-T]
gi|448948168|gb|EMB29006.1| hydrogenase, Fe-only [Treponema denticola MYR-T]
gi|448948635|gb|EMB29469.1| hydrogenase, Fe-only [Treponema denticola H1-T]
Length = 596
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 190/408 (46%), Gaps = 29/408 (7%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I+ DC C CIT + ++ E +A +N + K +V+ +A
Sbjct: 183 IADADCSLCGQCITHCPVGALRERDDTEKF--------WRAVANPD-KVVVVQVAPAIRT 233
Query: 127 SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---GG 182
+ G L + V K+ KR+G D V D + +++E EF++RF G
Sbjct: 234 AWGEHIGLDLKDASVNKIFDALKRIGADYVFDTAFSADLTIMEEAYEFIERFSKGELKDK 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CPGWV + KS ++ ++S KSP Q+ G+++K++ AEK+G P I+ V +
Sbjct: 294 PMFTSCCPGWVRFI-KSQYPHLVSHLSSAKSPMQMFGAVMKSYFAEKIGKKPEDIFSVAI 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL--ANELATTTLQEEKDGILDWP 300
MPC KK E FY E G+ D+DCV+T E ++ A+ L T + E D +
Sbjct: 353 MPCVAKKSEIDMELFYGEYAGH-DMDCVLTTREFVRMIKSAHILPQTLKETEPDKLF--- 408
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-----IREATF 355
H+ ++ G +GG L A + P FK +R+ I EA+F
Sbjct: 409 ---HDASGAGIIFG-ATGGVMEAALRTAYYAIMGKNCPPDAFKVVRHSSQEESGIIEASF 464
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
T + LR + +G N + LI ++ YDF+EIMACP GC+ GG Q +E
Sbjct: 465 TLKENNLRIAVTSGLANTRRLIDSIEAGEKHYDFVEIMACPGGCVGGGGQPIHESGELAV 524
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ L I + EN ++ LY + ++ K +L+T +
Sbjct: 525 KRGSNLYFIDKNSKVRYSHENECIKALYNDFFEKPNSHKAHSLLHTDH 572
>gi|209170690|gb|ACI42788.1| [FeFe]-hydrogenase [Clostridium tyrobutyricum]
Length = 577
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 193/420 (45%), Gaps = 61/420 (14%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
++CL C C+ + +T++ H + V K + + H +++++A ++
Sbjct: 186 SNCLLCGQCVIACPVAALTEKPHIDRVKKALADPKKH----------VIVAMAPSIRTAI 235
Query: 129 GAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + + V KL + L D + D+ +++E E L+R +GG P+FT
Sbjct: 236 GELFKMGFGKDVTGKLYTALRMLNFDKIFDINFGADMTIMEEATELLERIKNGGPFPMFT 295
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV A+ + E +L +S KSPQQ+ G+ KT+ G+ +Y VT+MPC
Sbjct: 296 SCCPAWVRQAQNYYPE-LLKNLSSAKSPQQIFGTATKTYYPAISGIEAKDVYTVTVMPCN 354
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWPWDEHN 305
DKK EA + E G R +D VIT EL ++ + ++ T+L+ DG D E++
Sbjct: 355 DKKYEADLPEM--EVNGMRCIDAVITTRELAKMIKDAKIKFTSLE---DGKADPAMGEYS 409
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------IREATFT 356
+ GT G V+ A+R E K L+N D I+EAT
Sbjct: 410 GAGAIF--GTTGG-----VMEAALRT----AKDFSENKELKNIDYTEVRGFNGIKEATVE 458
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
+ + NG N+ ++ K K Y FIE+MACP GC+NGG Q P
Sbjct: 459 LSGKSYNVAVINGAANLFKFMKSDKMKEKQYHFIEVMACPGGCINGGGQ--------PHI 510
Query: 417 TALELE---------TILCDLAKSEPR----ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
A++ E ++L + K+ PR EN + ++Y ++ G +L+ +Y
Sbjct: 511 NAMDRELVDYKVLRASVLYNQDKNLPRRKSHENPAILNMYGSYFGNPGQGLAHKLLHHNY 570
>gi|297617703|ref|YP_003702862.1| hydrogenase, Fe-only [Syntrophothermus lipocalidus DSM 12680]
gi|297145540|gb|ADI02297.1| hydrogenase, Fe-only [Syntrophothermus lipocalidus DSM 12680]
Length = 401
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 176/369 (47%), Gaps = 50/369 (13%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I CL C C+ S I S +K KA ++ + +V+ A +
Sbjct: 55 IDTRKCLNCGQCLISCPFGAIEDASMVSQVK--------KALTDPDI-FVVVQEAPSVRV 105
Query: 127 SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS------ 179
+LG +F ++ V K+ ++LG D V D A +++E E + R
Sbjct: 106 ALGEEFGMAPGTNVKGKMYAALRKLGFDRVYDTEFAADLTIMEEGTELIHRIFKHLGIPG 165
Query: 180 ----GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
G P FTS CP WV YAE ++ E +LP+IS KSPQQ+ G++ KT+ A+KL V P+
Sbjct: 166 YEHVGPLPQFTSCCPAWVKYAEDNYPE-VLPHISSAKSPQQMFGAVAKTYAAQKLNVDPA 224
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
+++ V++MPC KK E +R + GY+DVD VIT EL ++ K+
Sbjct: 225 NMFVVSVMPCTAKKYECNRPEMIAS--GYKDVDAVITTRELAQMI------------KEA 270
Query: 296 ILDWPW--DEHNPHRMLLVNGT-----GSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN- 347
+D+ DE + L G +GG L A L ++FK +R
Sbjct: 271 GIDFASLPDEKADKFVGLSTGAATIFGATGGVMEAALRTAYEVLSGQSLEQIDFKNVRGL 330
Query: 348 PDIREATFTC------GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLN 401
IREA+ + ++ C+ +G +++ +I+ + + R PY FIE+M CP GC+N
Sbjct: 331 RPIREASVEIPIKDLGKTLPVKVCVVSGTKHVDGVIKDVLKGRSPYHFIEVMNCPGGCVN 390
Query: 402 GGAQ-IRNE 409
GG Q IR +
Sbjct: 391 GGGQPIRRD 399
>gi|14250935|emb|CAC39231.1| HymC protein [Eubacterium acidaminophilum DSM 3953]
Length = 578
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 193/405 (47%), Gaps = 34/405 (8%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C+ + +++ E+V +V+ + TK +V+ +A +LG
Sbjct: 189 CIYCGQCVNVCPVAALREKTDIEKVWEVLEDE----------TKHVVVQVAPAVRAALGE 238
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
F +V K+ K LG V D A +++E E L R +GG P+ TS
Sbjct: 239 MFGNPIGTRVTGKMFTALKMLGFQKVFDTNFAADLTIMEEGTELLGRIKNGGTLPMITSC 298
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGW+ Y E + E +L ++S KSPQQ+MG+++K++ AEK + P ++ V++MPC K
Sbjct: 299 SPGWIRYVEHFYPE-LLDHVSSCKSPQQMMGAVLKSYYAEKNNIAPENMIVVSVMPCIAK 357
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K E+++ + N G RDVD V+T EL ++ A + +D D + ++
Sbjct: 358 KTESAKEEMKNVH-GTRDVDIVLTTRELGKMIKE--ARIEFNDLQDSNPDEFFGDYTGAA 414
Query: 309 MLLVNGTGSGGYAHNVLSHAIRQLCP----GESPVVEFKPLRNPD-IREATFTCGDVTLR 363
++ G V+ AIR + E +E+ +R + I+EA GD+ ++
Sbjct: 415 VIF-------GATGGVMEAAIRTVADIVSGQELEDIEYTAVRGLEGIKEAAVKIGDLEVK 467
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR-----NEKVASPKETA 418
+A+G N L+ ++ + Y FIEIM C GC+ GG Q EKV E A
Sbjct: 468 VAVAHGTANAGKLMDLVRDGKADYHFIEIMGCSGGCVTGGGQPHVDSRTKEKVNVKLERA 527
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L T K + N +++ LY+ +LG + K +L+T Y
Sbjct: 528 KALYTEDKLRDKRKSHHNESVKRLYEEYLGKPNGHKAHELLHTHY 572
>gi|410729206|ref|ZP_11367287.1| hydrogenase, Fe-only [Clostridium sp. Maddingley MBC34-26]
gi|410596048|gb|EKQ50735.1| hydrogenase, Fe-only [Clostridium sp. Maddingley MBC34-26]
Length = 566
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 187/407 (45%), Gaps = 42/407 (10%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+C+ C C T + I +S N KA N + +V +A +++G
Sbjct: 187 TNCVNCGQCATVCPTGAIIVKSDLR--------NVWKAIYNRRQR-VVAQVAPAVRIAVG 237
Query: 130 AKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFT 186
+F + Q V+ K+ +RLG D + D + +++E EFL++ PLFT
Sbjct: 238 EEFGIKAGQNVMGKIAAAMRRLGFDEIYDTSVGADLTVIEETKEFLEKLGCENNKIPLFT 297
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP W+ YAE H E ++PY+S KSP ++ G++IK + E+ V +MPC
Sbjct: 298 SCCPAWIRYAETKHPE-LMPYVSSCKSPMEMFGAVIKEYYKERDASEDKETISVAVMPCT 356
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA+R +F G RDVD VIT EL ++ E+ + E + D P+
Sbjct: 357 AKKSEAAREEFIRN--GVRDVDYVITTTELCDMI-KEIGIKFDEIEAES-SDVPFS---- 408
Query: 307 HRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDV 360
L +G G SGG V+ P +EF R D I+ +
Sbjct: 409 ----LYSGAGVIFGVSGGVTEAVIRSIAENKTPKGLKEIEFIGARGIDGIKVCEVPVAEN 464
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKET 417
+R I +G N + LI+++ + +DFIE+MACP GC+ G Q + +K + +
Sbjct: 465 IIRIGIVSGLSNAEKLIERINSGKEHFDFIEVMACPGGCICGAGQPFCLTEDK--NERAK 522
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
L + + +SE EN + LY L G+S K +L+ Y+
Sbjct: 523 GLYKVDKVAQIKRSE--ENPMITALYDRLLKGRS----KELLHVHYN 563
>gi|404483828|ref|ZP_11019045.1| hydrogenase, Fe-only [Clostridiales bacterium OBRC5-5]
gi|404343187|gb|EJZ69554.1| hydrogenase, Fe-only [Clostridiales bacterium OBRC5-5]
Length = 573
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 167/340 (49%), Gaps = 28/340 (8%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I DC C CIT ++++ + + + + KT+V+ +A
Sbjct: 182 KIEEADCSLCGQCITHCPVGALSERD---------DTSKFWEAVADPEKTVVVQIAPAVR 232
Query: 126 LSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGG 181
+ G F L + V K+ K++G D V D + +++E NEF+ R+ L G
Sbjct: 233 TAWGEVFGLKDKDATVGKIVDALKKMGADYVFDTSFSADLTIMEEANEFVHRYTNGLIGD 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS + +S KSPQQ+ G+++K++ AEK+GV P ++ V+
Sbjct: 293 RPMFTSCCPGWVRFV-KSQYPRMTKSLSTAKSPQQMFGAVMKSYFAEKIGVKPENMVSVS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWP 300
+MPC KK E F+ E G+ DVD +T EL ++ A+ + +L+ D + D P
Sbjct: 352 IMPCVAKKGEREMELFHGEYAGH-DVDIALTTRELTRMIRASHINPKSLE---DVVADRP 407
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR------NPDIREAT 354
+++ ++ GT +GG L A + P FKP+R N EA
Sbjct: 408 MGDYSGAGVIF--GT-TGGVMEAALRTAYSIIKKENPPADAFKPVRSKTFQENDGTVEAK 464
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMA 394
F D+ L + +G N + L+ K++R YDF+E+MA
Sbjct: 465 FNIDDIELNIAVVSGLGNTRKLLNKIERGEAKYDFVEVMA 504
>gi|168212325|ref|ZP_02637950.1| [Fe] hydrogenase [Clostridium perfringens CPE str. F4969]
gi|170716012|gb|EDT28194.1| [Fe] hydrogenase [Clostridium perfringens CPE str. F4969]
Length = 696
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 196/415 (47%), Gaps = 35/415 (8%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C + IT+ V A S+++ K +++S + +SLG +
Sbjct: 58 CINCGQCANVCPTSSITE--------VFDYKKVQDAISDKD-KIVIVSTSPAVRVSLGEE 108
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTSE 188
F ++ V K+ ++LG + VLD A ++VE +E ++R PL FTS
Sbjct: 109 FNMNDGSFVQGKMIALLRKLGFNYVLDTNFAADMTIVEEASELVERITKNNKPLPQFTSC 168
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP W+ YAE H E IL +IS KSP + G IKT+ A+K+G+ PS I +V L PC K
Sbjct: 169 CPAWIKYAETFHPE-ILEHISTSKSPIGMQGPTIKTYFAKKMGIDPSKIVNVALTPCTAK 227
Query: 249 KLEASRAD------FYNEELGYRDVDCVITAVELEVLLA-NELATTTLQEEKDGILDWPW 301
K E R + +Y E RDVD VIT E+ + E+ +L+ D D
Sbjct: 228 KFEIKREEMNASGRYYGIE-DMRDVDYVITTREVAIWAKEKEIDFNSLE---DSNFDKLM 283
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN----PDIREATFTC 357
E + ++ N +GG L A + + E P +F L + +REA+F
Sbjct: 284 GEASGAGVIFAN---TGGVMEAALRTAYKYITK-EDPPKDFYDLESVRGMEGVREASFKI 339
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
D+ + + G N I K+K + Y FIE+M CP GC+ GG Q +++K K
Sbjct: 340 NDLEINIAVIYGTENASKFISKMKNEDKKYHFIEVMTCPGGCIGGGGQPKDKKFEGDKLR 399
Query: 418 ALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
++ + + + R EN ++ LY+ + ++ + ML+T+Y + K+
Sbjct: 400 EKRIDGLYKRDSNMKLRVSYENEEIKKLYEKFYEKPLSNLAEEMLHTTYFDRSKD 454
>gi|363899294|ref|ZP_09325804.1| hypothetical protein HMPREF9625_00464 [Oribacterium sp. ACB1]
gi|395209571|ref|ZP_10398665.1| [FeFe] hydrogenase, group A [Oribacterium sp. ACB8]
gi|361959131|gb|EHL12427.1| hypothetical protein HMPREF9625_00464 [Oribacterium sp. ACB1]
gi|394705202|gb|EJF12731.1| [FeFe] hydrogenase, group A [Oribacterium sp. ACB8]
Length = 577
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 201/403 (49%), Gaps = 38/403 (9%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL--SLG 129
C C CIT + + R++ + ++ +TIVL+ I P + + G
Sbjct: 189 CALCGQCITHCPVGALRE----------RDDTDRILDALDDPETIVLA-QIAPSIRTAWG 237
Query: 130 AKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFT 186
+F L E+ V +L K +G D V D + +++E +EFL + G P+FT
Sbjct: 238 EEFGLGPEEATVERLASCLKEIGFDYVFDTDFSADLTIMEEASEFLHKLTQNEGQFPMFT 297
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + + + EFI P +S KSPQQ+ G++ KT+ A+ L V P I+ V++MPC
Sbjct: 298 SCCPGWVRFIKSHYPEFI-PQVSTSKSPQQMFGAIAKTYYADILKVSPKKIFSVSIMPCL 356
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E + + +++ G DVD +T E+ L+ + + +K+ LD P
Sbjct: 357 AKKAECAYPNMTDKD-GNFDVDVALTTREVNRLIRSFHISPAKLADKE--LDMP------ 407
Query: 307 HRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREATFTCG 358
L G+G+G G V+ A+R GE+P + F+ +R D +E+TFT
Sbjct: 408 ----LGIGSGAGNIFGATGGVMEAALRSAYYFATGENPDPDAFQDVRGMDGWKESTFTIA 463
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
L+ + NG N L+ LK ++ YDF+E+MACP GC+ GG Q +++V A
Sbjct: 464 GNKLKIAVVNGLANADKLLSALKTGQVHYDFVEVMACPGGCVGGGGQPIHDQVEMAAHRA 523
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
L + + EN +++ +YK +LG ++ + +L+T
Sbjct: 524 PVLYKQDREGSLRFCHENPSIKAVYKDFLGEPLSELAEELLHT 566
>gi|326515148|dbj|BAK03487.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 256
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 136/261 (52%), Gaps = 28/261 (10%)
Query: 233 HPSHIYHVTLMPCYDKKLEASRADFYN--EELGYRDVDCVITAVELEVLLANELATTTLQ 290
P +YHVT+MPCYDKKLEA R DF EE +VD V+T E+ L+ ++
Sbjct: 8 RPYDVYHVTVMPCYDKKLEAVRGDFVFSVEEKEVTEVDSVLTTGEVLDLIQSK------- 60
Query: 291 EEKDGILDWPWDEHNPHRMLLVNGTGSG----------GYAHNVLSHAIRQLCPGE-SPV 339
+D+ E +P LL N G GYA + +A R L E
Sbjct: 61 -----SVDFKTMEESPLDRLLTNVDDDGHLYGVSGGSGGYAETIFRYAARALFNREIEGP 115
Query: 340 VEFKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSG 398
++FK LRN D RE T G L+F + GFRN+QN+++K+K + Y FIE+MACPSG
Sbjct: 116 LDFKILRNSDFREVTLEVEGRPVLKFALCYGFRNLQNIVRKVKMGKCEYQFIEVMACPSG 175
Query: 399 CLNGGAQIRNEKVASPKETALELETI-LCDLA-KSEPRENATLEHLYKAWLGGKSTDKGK 456
CLNGG QI+ K SPK+ LE + + D++ S P +N + LY WL +D K
Sbjct: 176 CLNGGGQIKPAKGQSPKDLIKLLEDVYMQDVSIISNPFDNPIAKTLYDDWLVEPGSDNAK 235
Query: 457 HMLNTSYHNIPKNNIALNVKW 477
L+T YH + K+ + W
Sbjct: 236 RYLHTQYHPVVKSVTSQLQNW 256
>gi|269216954|ref|ZP_06160808.1| ferredoxin hydrogenase [Slackia exigua ATCC 700122]
gi|269129761|gb|EEZ60845.1| ferredoxin hydrogenase [Slackia exigua ATCC 700122]
Length = 583
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 182/405 (44%), Gaps = 30/405 (7%)
Query: 73 LACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKF 132
LA + C+ + V + I E NA A + + ++ A++ L +F
Sbjct: 192 LAAASCVNCGQCVAVCPVGALVEKTCIDEVNAALADPKKYV-AVQVAPAVRAALGEDFEF 250
Query: 133 ALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPG 191
L + V ++ + LG D V D ++VE NE +DR G P+ TS CPG
Sbjct: 251 PLGID-VEGRIAEGLRLLGFDKVFDTKFGADLTIVEEANELVDRIAHDGVLPMITSCCPG 309
Query: 192 WVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLE 251
W+ YAE + + +L IS KSP Q+ G+++K+ LAE+ G+ I V++MPC KK E
Sbjct: 310 WIKYAEHFYPD-MLDNISSCKSPHQMHGAIVKSFLAEREGLDKEDIVTVSVMPCTAKKFE 368
Query: 252 ASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLL 311
+R D + G DVD V+T EL + + GI + + L
Sbjct: 369 CTRND--EDGAGVPDVDIVVTTNELAKMFKDA-----------GIQLEAMNPATAYDHPL 415
Query: 312 VNGTGSG---GYAHNVLSHAIRQLCPG----ESPVVEFKPLRN-PDIREATFTCGDVTLR 363
GTG+G G + V+ A+R C E EF +R I+EA+ +R
Sbjct: 416 GFGTGAGIIFGASGGVMEAALRTACETISGKELDAFEFAAVRGMAGIKEASVDIDGADVR 475
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS-----PKETA 418
+ +G N L+ K+K Y FIE+MACP GC+NGG Q A P A
Sbjct: 476 VAVVSGLANANMLLTKVKNGEADYQFIEVMACPGGCVNGGGQPHQGAYARRLADVPAARA 535
Query: 419 LELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L + + EN ++ LY +L +++ +L+T+Y
Sbjct: 536 AALYGNDSESEVRKSHENPYIKLLYDEYLEKPGSERAHRLLHTTY 580
>gi|422873618|ref|ZP_16920103.1| [Fe] hydrogenase [Clostridium perfringens F262]
gi|380305436|gb|EIA17714.1| [Fe] hydrogenase [Clostridium perfringens F262]
Length = 696
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 198/420 (47%), Gaps = 45/420 (10%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C + IT+ K +++ +HK K +++S + +SLG +
Sbjct: 58 CINCGQCANVCPTSSITEVFD---YKKVQDAISHK------DKIVIVSTSPAVRVSLGEE 108
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTSE 188
F +++ V K+ ++LG D VLD A ++VE +E ++R PL FTS
Sbjct: 109 FNMNNGSFVQGKMIALLRKLGFDYVLDTNFAADMTIVEEASELVERITKNNKPLPQFTSC 168
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP WV YAE H E IL +IS KSP + G IKT+ A+K+G+ PS I +V L PC K
Sbjct: 169 CPAWVKYAETFHPE-ILDHISTSKSPIGMQGPTIKTYFAKKMGIDPSKIVNVALTPCTAK 227
Query: 249 KLEASRAD------FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
K E R + +Y E RD+D VIT E+ + K+ +D+
Sbjct: 228 KFEIKREEMNASGRYYGIE-DMRDMDYVITTREVAIWA------------KEKGIDFNSL 274
Query: 303 EHNPHRMLLVNGTGSGGYAHN---VLSHAIR---QLCPGESPVVEFKPLRN----PDIRE 352
E + L+ +G+G N V+ A+R + E P +F L + +RE
Sbjct: 275 EDSNFDKLMGEASGAGVIFANTGGVMEAALRTAYKYITKEDPPKDFYDLESVRGMEGVRE 334
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
A+F D+ + + G N I K+K Y FIE+M CP GC+ GG Q +++K
Sbjct: 335 ASFKINDLEINIAVIYGTENASKFISKMKNSDKKYHFIEVMTCPGGCIGGGGQPKDKKFE 394
Query: 413 SPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
K ++ + + + R EN ++ LY+ + ++ + ML+T+Y + K+
Sbjct: 395 GDKLREKRIDGLYKRDSSMKLRVSYENEEIKKLYEEFYEKPLSNLAEEMLHTTYFDRSKD 454
>gi|134298338|ref|YP_001111834.1| hydrogenase [Desulfotomaculum reducens MI-1]
gi|134051038|gb|ABO49009.1| hydrogenase, Fe-only [Desulfotomaculum reducens MI-1]
Length = 520
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 200/424 (47%), Gaps = 50/424 (11%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + IT++ ++V+K + + H +V+ A + LG
Sbjct: 113 CVNCGQCTLWCPTAAITERDDIDKVVKALENKDLH----------VVVQTAPATRVGLGE 162
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLFT 186
+F ++ V K K+LG D V D + ++ E E + R L P FT
Sbjct: 163 EFGMAPGTFVEGKQVAALKQLGFDAVFDTNFSADLTIFEEGTELIKRISGDLHEPLPQFT 222
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV + E + + +LP++S KSPQQ++G+LIKT+ A++ G+ P I+ V++MPC
Sbjct: 223 SCSPGWVKFCEYYYPD-LLPHMSTCKSPQQMLGALIKTYYAKEKGIKPEKIFSVSIMPCT 281
Query: 247 DKKLEASRADFYNE-----ELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWP 300
KK EA+R + + + +DVD V+T EL L+ A + L ++K
Sbjct: 282 AKKFEAARPEMNSSGKHAGKPQLKDVDVVLTTRELARLIKAKGMDLNNLPDKK------- 334
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESP---VVEFKPLRN-PDI 350
+ L+ GTG+G G V+ AIR L + P ++ P+R
Sbjct: 335 ------YDSLMGEGTGAGLIFGATGGVMEAAIRSAYFLITKQDPPEALLNLTPIRGLQGC 388
Query: 351 REATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
+EA+ V T++ + +G N + +++ +++K P+ FIE M CP GC++GG Q R
Sbjct: 389 KEASVDIPGVGTVKVAVVHGLSNARPILEAVRKKEAPWHFIEFMCCPGGCISGGGQPRTS 448
Query: 410 KVASPKETALELETILCDLA----KSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
S + + +I A K + EN + LY+ ++ ++ +L+T Y +
Sbjct: 449 LPPSDEVRQARINSIYNADAHIYSKRKSYENQEVLALYEKFMENPNSHLAHELLHTHYTD 508
Query: 466 IPKN 469
K
Sbjct: 509 RSKQ 512
>gi|270307598|ref|YP_003329656.1| [Fe] hydrogenase subunit HymC [Dehalococcoides sp. VS]
gi|270153490|gb|ACZ61328.1| [Fe] hydrogenase, Hym C subunit [Dehalococcoides sp. VS]
Length = 573
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 190/373 (50%), Gaps = 29/373 (7%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFS 165
A+ + TK +V+ A +SLG + L +VAK + +RLG D V D +
Sbjct: 216 AAIADPTKHVVVQEAPSVRVSLGEELGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLT 275
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E +E ++R GG P TS CPGWV + E + E + P +S KSPQQ+ G++ KT
Sbjct: 276 IMEEGSELVERVKDGGVLPQITSCCPGWVKFMEHYYPE-LAPNVSSAKSPQQMFGAVCKT 334
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEK G+ P I +V++MPC KK E R + + G++DVD V+T EL ++
Sbjct: 335 YYAEKSGIDPKTIINVSVMPCTAKKFECQRPEMNDS--GFKDVDYVLTTRELARMI---- 388
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPG-ES 337
K+ LD+ E P LL TG+ G V+ AIR L G E
Sbjct: 389 --------KEAGLDFASLEEEPAEDLLGLYTGAATIFGATGGVMEAAIRSAYTLITGREL 440
Query: 338 PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
++ +P+R + I+ A+ + ++ +A+G N ++L++++K PY FIEIMACP
Sbjct: 441 ENLDIEPVRGLEGIKTASVNIDGLEVKVAVAHGLGNARHLLEEIKEGTSPYHFIEIMACP 500
Query: 397 SGCLNGGAQ-IR-NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDK 454
GC+ GG Q IR + + + AL E ++ K N ++E +Y +L +
Sbjct: 501 GGCVGGGGQPIRFDSSLKKKRGEALYEEDR--NMPKRCSHHNTSVEKIYADYLEKPLGKR 558
Query: 455 GKHMLNTSYHNIP 467
+L+T Y + P
Sbjct: 559 SHKLLHTEYTSRP 571
>gi|302389268|ref|YP_003825089.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Thermosediminibacter oceani DSM 16646]
gi|302199896|gb|ADL07466.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Thermosediminibacter oceani DSM 16646]
Length = 591
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 210/440 (47%), Gaps = 46/440 (10%)
Query: 44 RIQDDGAYIQETNGREEKLKKV-EISLTD--CLACSGCITSAE-SVLITQQSHEEVMKVI 99
++Q G G E + V ++SL D C+ C CI + L + + V K +
Sbjct: 160 KVQGVGVISPNHRGFETMVAPVFDMSLADVACVNCGQCILACPVGALKEKDDTDRVWKAL 219
Query: 100 RENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDV 158
+ H +++ +A +SLG +F L +V K + +R+G D V D
Sbjct: 220 ADPEKH----------VIVQIAPAVRVSLGEEFGLGRGAIVTKKIPAALRRMGFDRVFDT 269
Query: 159 GIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQV 217
+ +++E +EF++R GG PL TS PGW+ + E + EF L +S KSPQQ+
Sbjct: 270 DFSADLTIMEEGHEFIERLQHGGKLPLITSCSPGWIKFCEHYYPEF-LENLSTCKSPQQM 328
Query: 218 MGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELE 277
G++ KT+ A+K+G+ PS I+ V++MPC KK E R + + GY+DVD V+T EL
Sbjct: 329 FGAVAKTYYAQKVGIDPSKIFVVSIMPCTAKKYECQRPEMRSS--GYQDVDVVLTTRELS 386
Query: 278 VLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQL 332
+L A L D D P + + G G +GG L +
Sbjct: 387 RMLKE--AGINLAAMPDEDFDDP--------LGISTGAGAIFGATGGVMEAALRTVYEVM 436
Query: 333 CPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIE 391
E VEF +R + I+EAT V + +A+G N + L+ ++K Y F+E
Sbjct: 437 TGRELKDVEFTEVRGVEGIKEATIDIDGVKVNVAVAHGLGNARKLLDRIKSGEASYHFVE 496
Query: 392 IMACPSGCLNGGAQIRNEKVASPKETALELETI----LCDLAKSEP----RENATLEHLY 443
IM CP GC+ GG Q +++ + L+ + + ++ +S P EN ++ LY
Sbjct: 497 IMGCPGGCVGGGGQ---PILSAGERWELDYREVRGSAIYEVDRSMPLRKSHENPAVQQLY 553
Query: 444 KAWLGGKSTDKGKHMLNTSY 463
+ +LG ++K +L+T Y
Sbjct: 554 REFLGKPLSEKSHELLHTHY 573
>gi|328955433|ref|YP_004372766.1| hydrogenase, Fe-only [Coriobacterium glomerans PW2]
gi|328455757|gb|AEB06951.1| hydrogenase, Fe-only [Coriobacterium glomerans PW2]
Length = 585
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 193/417 (46%), Gaps = 51/417 (12%)
Query: 67 ISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I T C C CIT L + E+V + + + ++ +A
Sbjct: 183 IEETGCSLCGQCITHCPVGALRERDDTEQVFDAL----------GDPERICLVQIAPAVR 232
Query: 126 LSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
+ G F L+ Q V +L + +G D + D + +++E +E L+R G
Sbjct: 233 TAWGETFGLAPGQATVERLAAALRMVGFDYIFDTSFSADLTIMEEASELLERLKRAGESG 292
Query: 183 -----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P+FTS CPGWV Y K H ++ +S KSPQQ+ G++ KT+ A+ LGV PS I
Sbjct: 293 EHPTFPMFTSCCPGWVRYV-KDHYPELVDQLSTSKSPQQMFGAIAKTYYAQALGVDPSKI 351
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGI 296
+ V++MPC KK EA+ + G DVD +T E+ ++ A + L +E
Sbjct: 352 FSVSIMPCVAKKAEAALPSMTGAD-GAPDVDVALTVREVCRMVKACHIDVAKLDDEP--- 407
Query: 297 LDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD 349
LD P H TG+G G V+ A+R GE + F +R D
Sbjct: 408 LDQPLGTH----------TGAGVAFGSTGGVMDAALRSAYYFATGERCDADAFSDVRGMD 457
Query: 350 -IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
+EATFT GD L+ + +G N +NL+ LK + YDF+E+MACP GC+ GG Q
Sbjct: 458 GWKEATFTMGDKALKVAVVHGLANARNLLDALKSGEVGYDFVEVMACPGGCVGGGGQ--- 514
Query: 409 EKVASPKETALELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
+ E A E +L L +S EN ++ Y +LG +++ + +L+T
Sbjct: 515 -PIHDGMELAGERGEVLWGLDRSSNLRRSYENPAIQMCYADYLGAPLSERAEELLHT 570
>gi|110799819|ref|YP_695522.1| [Fe] hydrogenase [Clostridium perfringens ATCC 13124]
gi|110674466|gb|ABG83453.1| [Fe] hydrogenase [Clostridium perfringens ATCC 13124]
Length = 696
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 195/415 (46%), Gaps = 35/415 (8%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C + IT+ V A S+++ K +++S + +SLG +
Sbjct: 58 CINCGQCANVCPTSSITE--------VFDYKKVQDAISDKD-KIVIVSTSPAVRVSLGEE 108
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTSE 188
F ++ V K+ ++LG D VLD A ++VE +E ++R PL FTS
Sbjct: 109 FNMNDGSFVQGKMIALLRKLGFDYVLDTNFAADMTIVEEASELVERITKNNKPLPQFTSC 168
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP WV YAE H E IL +IS KSP + G IKT+ A+K+G+ PS I +V L PC K
Sbjct: 169 CPAWVKYAETFHPE-ILEHISTSKSPIGMQGPTIKTYFAKKMGIDPSKIVNVALTPCTAK 227
Query: 249 KLEASRAD------FYNEELGYRDVDCVITAVELEVLLA-NELATTTLQEEKDGILDWPW 301
K E R + +Y E RD+D VIT E+ + E+ +L+ D D
Sbjct: 228 KFEIKREEMNASGRYYGIE-DMRDMDYVITTREVAIWAKEKEIDFNSLE---DSNFDKLM 283
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN----PDIREATFTC 357
E + ++ N +GG L A + + E P +F L + +REA+F
Sbjct: 284 GEASGAGVIFAN---TGGVMEAALRTAYKYITK-EDPPKDFYDLESVRGIEGVREASFKI 339
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
D+ + + G N I K+K Y FIE+M CP GC+ GG Q +++K K
Sbjct: 340 NDLEINIAVIYGTENALKFISKIKNSDKKYHFIEVMTCPGGCIGGGGQPKDKKFEGDKLR 399
Query: 418 ALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
++ + + + R EN ++ LY+ + ++ + ML+T+Y + K+
Sbjct: 400 EKRIDGLYKRDSSMKLRVSYENEEIKKLYEEFYEKPLSNLAEEMLHTTYFDRSKD 454
>gi|422342080|ref|ZP_16423020.1| Fe-hydrogenase [Treponema denticola F0402]
gi|325474148|gb|EGC77336.1| Fe-hydrogenase [Treponema denticola F0402]
Length = 596
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 189/409 (46%), Gaps = 31/409 (7%)
Query: 67 ISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+ DC C CIT L + E+ + + + + K +V+ +A
Sbjct: 183 IADADCSLCGQCITHCPVGALRERDDTEKFWRAVADPD----------KVVVVQVAPAIR 232
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---G 181
+ G L + V K+ KR+G D V D + +++E EF++RF G
Sbjct: 233 TAWGEHIGLDLKDASVNKIFDALKRIGADYVFDTAFSADLTIMEEAYEFIERFSKGELKD 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS ++ ++S KSP Q+ G+++K++ AEK+G P I+ V
Sbjct: 293 KPMFTSCCPGWVRFI-KSQYPHLVSHLSSAKSPMQMFGAVMKSYFAEKIGKKPEDIFSVA 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL--ANELATTTLQEEKDGILDW 299
+MPC KK E FY E G+ D+DCV+T E ++ A+ L T + E D +
Sbjct: 352 IMPCVAKKSEIDMELFYGEYAGH-DMDCVLTTREFVRMIKSAHILPQTLKETEPDKLF-- 408
Query: 300 PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-----IREAT 354
H+ ++ G +GG L A + P FK +R+ I EA+
Sbjct: 409 ----HDASGAGIIFG-ATGGVMEAALRTAYYAIMGKNCPPDAFKVVRHSSQEESGIIEAS 463
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
FT + LR + +G N + LI ++ YDF+EIMACP GC+ GG Q +E
Sbjct: 464 FTLKENNLRIAVTSGLANTRRLIDSIEAGEKHYDFVEIMACPGGCVGGGGQPIHESGELA 523
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ L I + EN ++ LY + ++ K +L+T +
Sbjct: 524 VKRGSNLYFIDKNSKVRYSHENECIKALYNDFFEKPNSHKAHSLLHTDH 572
>gi|168216086|ref|ZP_02641711.1| [Fe] hydrogenase [Clostridium perfringens NCTC 8239]
gi|182381892|gb|EDT79371.1| [Fe] hydrogenase [Clostridium perfringens NCTC 8239]
Length = 696
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 196/420 (46%), Gaps = 45/420 (10%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C + IT+ V A S+++ K +++S + +SLG +
Sbjct: 58 CINCGQCANVCPTSSITE--------VFDYKKVQDAISDKD-KIVIVSTSPAVRVSLGEE 108
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTSE 188
F ++ V K+ ++LG D VLD A ++VE +E ++R PL FTS
Sbjct: 109 FNMNDGSFVQGKMIALLRKLGFDYVLDTNFAADMTIVEEASELVERITKNNKPLPQFTSC 168
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP WV YAE H E IL +IS KSP + G IKT+ A+K+G+ PS I +V L PC K
Sbjct: 169 CPAWVKYAETFHPE-ILEHISTSKSPIGMQGPTIKTYFAKKMGIDPSKIVNVALTPCTAK 227
Query: 249 KLEASRAD------FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
K E R + +Y E RD+D VIT E+ + K+ +D+
Sbjct: 228 KFEIKREEMNASGRYYGIE-DMRDMDYVITTREVAIWA------------KEKGIDFNSL 274
Query: 303 EHNPHRMLLVNGTGSGGYAHN---VLSHAIR---QLCPGESPVVEFKPLRN----PDIRE 352
E + L+ +G+G N V+ A+R + E P +F L + +RE
Sbjct: 275 EDSNFDKLMGEASGAGVIFANTGGVMEAALRTAYKYITKEDPPKDFYDLESVRGMEGVRE 334
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
A+F D+ + + G N I K+K Y FIE+M CP GC+ GG Q +++K
Sbjct: 335 ASFKINDLEINIAVIYGTENASKFISKMKNSDKKYHFIEVMTCPGGCIGGGGQPKDKKFE 394
Query: 413 SPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
K ++ + + + R EN ++ LY+ + ++ + ML+T+Y + K+
Sbjct: 395 GDKLREKRIDGLYKRDSNMKLRVSYENEEIKKLYEEFYEKPLSNLAEEMLHTTYFDRSKD 454
>gi|260655145|ref|ZP_05860633.1| periplasmic [Fe] hydrogenase, large subunit [Jonquetella anthropi
E3_33 E1]
gi|424844979|ref|ZP_18269590.1| hydrogenase, Fe-only [Jonquetella anthropi DSM 22815]
gi|260630067|gb|EEX48261.1| periplasmic [Fe] hydrogenase, large subunit [Jonquetella anthropi
E3_33 E1]
gi|363986417|gb|EHM13247.1| hydrogenase, Fe-only [Jonquetella anthropi DSM 22815]
Length = 577
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 202/408 (49%), Gaps = 47/408 (11%)
Query: 72 CLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C CIT L + +++M I ++ K +++ +A +
Sbjct: 188 CVLCGQCITHCPVGALHERDDTQKLMDAI----------DDPDKIVLVQIAPAIRTAWCE 237
Query: 131 KFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG---PLFT 186
+F + E+ V +L + +G D V D + +++E +EF++R P+FT
Sbjct: 238 EFGMKPEEATVNRLASALRIIGFDYVFDTNFSADLTIMEESSEFVERLTHADQFKFPMFT 297
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV + + + ++I P +S KSPQQ+ G++ K+ + LGV P I+ V++MPC
Sbjct: 298 SCCPAWVRFVKANWPKYI-PQLSTAKSPQQMFGAIAKSWYPQLLGVDPKRIFSVSVMPCL 356
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWPWDEHN 305
KK E + + G +DVD IT E+ L+ A+++ T L++E+ LD P
Sbjct: 357 AKKAECALPTMNSAGAG-QDVDLAITNREITRLIRAHQIDPTDLEDEQ---LDMP----- 407
Query: 306 PHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREATFTC 357
L G+G+G G V+ A+R G++ E FK +R +EA F
Sbjct: 408 -----LGIGSGAGAIFGVTGGVMEAALRSAHYFVTGKNASPETFKAVRGQQGWKEAEFEI 462
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKET 417
G L+ + NG N LI +L++ R+ YDF+E+MACP GC+ GG Q + + KE
Sbjct: 463 GGTKLKVAVVNGLSNANQLITELEKGRVHYDFVEVMACPGGCVGGGGQ----PIHAQKEM 518
Query: 418 ALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNT 461
A + +L ++ K P N ++ YK++LG +++ H+L+T
Sbjct: 519 APDRAPVLYNIDKKLPWRYSHANPSIIECYKSYLGKPLSERAHHLLHT 566
>gi|403388213|ref|ZP_10930270.1| hydrogenase, Fe-only [Clostridium sp. JC122]
Length = 460
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 175/355 (49%), Gaps = 35/355 (9%)
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++L +F + + KL K L D V D A +++E +E ++R +G P
Sbjct: 117 VALAEEFGMEFGALTPGKLAKALKVLNFDRVYDTNFAADLTIMEEGSELIERVTTGKNLP 176
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV +AE ++ E +L ++S KSPQQ+ G L KT+ A+ V PS IY V +M
Sbjct: 177 MFTSCCPAWVKFAEDTYPE-LLNHLSSCKSPQQMAGVLFKTYGAKIDKVEPSKIYSVAVM 235
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC K+ E R + + GYRDVDCVIT EL L+ K+ +D+ E
Sbjct: 236 PCTCKQFECDREEMNSS--GYRDVDCVITTRELAHLI------------KESGIDFANLE 281
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATF 355
+ L +G+G G V+ AIR +L +S P +E +R + IR AT
Sbjct: 282 EDTFDTPLGTYSGAGNIFGATGGVMEAAIRTGYELISKKSIPKLELNFIRGSEGIRTATV 341
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-------IRN 408
+ L+ + +G +++ +++ +K + Y F+E+M CP GC++GG Q R
Sbjct: 342 DVDGLELKVAVVSGLKHVSKVMEDVKLGKCDYHFVEVMTCPDGCVSGGGQPKLLLEEYRQ 401
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
KE+ ++ L + KS EN ++ +Y +L K +L+T Y
Sbjct: 402 VAYKKRKESLYNHDSAL-KIRKS--HENPDIKKIYDEFLEKPLGHKSHELLHTKY 453
>gi|449123663|ref|ZP_21759985.1| hydrogenase, Fe-only [Treponema denticola OTK]
gi|448943916|gb|EMB24798.1| hydrogenase, Fe-only [Treponema denticola OTK]
Length = 596
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 194/413 (46%), Gaps = 39/413 (9%)
Query: 67 ISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+ DC C CIT L + E+ + + + + K +V+ +A
Sbjct: 183 IADADCSLCGQCITHCPVGALRERDDTEKFWRAVADPD----------KVVVVQVAPAIR 232
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---G 181
+ G L + V K+ KR+G D V D + +++E EF++RF G
Sbjct: 233 TAWGEHIGLDLKDASVNKIFDALKRIGADYVFDTAFSADLTIMEEAYEFIERFSKGELKD 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS ++ ++S KSP Q+ G+++K++ AEK+G P I+ V
Sbjct: 293 KPMFTSCCPGWVRFI-KSQYPHLVSHLSSAKSPMQMFGAVMKSYFAEKIGKKPEDIFSVA 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL--ANELATTTLQEEKDGILDW 299
+MPC KK E FY E G+ D+DCV+T E ++ A+ L T + E D +
Sbjct: 352 IMPCVAKKSEIDMELFYGEYAGH-DMDCVLTTREFVRMIKSAHILPQTLKETEPDKLF-- 408
Query: 300 PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-----IREAT 354
H+ ++ G +GG L A + P FK +R+ I EA+
Sbjct: 409 ----HDASGAGIIFG-ATGGVMEAALRTAYYAIMGKNCPPDAFKVVRHSSQEESGIIEAS 463
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
FT + LR + +G N + LI ++ YDF+EIMACP GC+ GG Q +E
Sbjct: 464 FTLKENNLRIAVTSGLANTRRLIDSIEAGEKHYDFVEIMACPGGCVGGGGQPIHES---- 519
Query: 415 KETALELETILCDLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E A++ + L L K+ EN ++ LY + ++ K +L+T +
Sbjct: 520 GELAVKRGSNLYFLDKNSKVRYSHENECIKALYNDFFEKPNSHKAHSLLHTDH 572
>gi|227872437|ref|ZP_03990780.1| ferredoxin hydrogenase [Oribacterium sinus F0268]
gi|227841716|gb|EEJ52003.1| ferredoxin hydrogenase [Oribacterium sinus F0268]
Length = 579
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 201/408 (49%), Gaps = 46/408 (11%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL--SLG 129
C C CIT + + R++ + ++ +TIVL+ I P + + G
Sbjct: 190 CSLCGQCITHCPVGALRE----------RDDTDKVLDALDDPETIVLA-QIAPSIRTAWG 238
Query: 130 AKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL--SGGGPLFT 186
+F L E+ V +L K +G D V D A +++E +EFL + G P+FT
Sbjct: 239 EEFGLDAEEASVQRLASCLKEVGFDYVFDTDFAADLTIMEEASEFLHKLTHQEGDFPMFT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + + + E+I P +S KSPQQ+ G++ K++ A+ L V P I+ V++MPC
Sbjct: 299 SCCPGWVRFIKSHYPEYI-PQVSTSKSPQQMFGAIAKSYYADILKVSPKKIFSVSIMPCL 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E S + + E G DVD +T E+ L+ + ++ KD LD P
Sbjct: 358 AKKAECSYPNMTDSE-GNFDVDVALTTREVNRLI--RAMHISPKKMKDVELDMP------ 408
Query: 307 HRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREATFTCG 358
L G+G+G G V+ A+R L GE+P + FK +R D +E+TF
Sbjct: 409 ----LGLGSGAGNIFGATGGVMEAALRSAYYLATGENPDPDAFKDVRGMDGWKESTFDIA 464
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
L+ + NG N L+ LK+ ++ YDF+E+MACP GC+ GG Q + KE A
Sbjct: 465 GNKLKIAVVNGLGNADRLLTALKKGQVHYDFVEVMACPGGCVGGGGQ----PIHDQKEMA 520
Query: 419 LELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTS 462
+L + EN +++ +Y+ +L +++ + +L+T+
Sbjct: 521 AHRAPVLYKQDREGTLRFCHENPSIKLVYQDYLEKPLSERAEELLHTN 568
>gi|167759969|ref|ZP_02432096.1| hypothetical protein CLOSCI_02335 [Clostridium scindens ATCC 35704]
gi|167662588|gb|EDS06718.1| rubredoxin [Clostridium scindens ATCC 35704]
Length = 708
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 196/416 (47%), Gaps = 45/416 (10%)
Query: 72 CLACSGCITSAESVLITQ-QSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C IT+ + EV + I++ + K ++ S + + LG
Sbjct: 57 CIHCGQCANVCPVNSITEVYEYGEVKEAIKDPD----------KIVIFSTSPSVRVGLGE 106
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTS 187
F ++ V K+ + LG D VLD + +++E +E ++R PL FTS
Sbjct: 107 TFGMAPGSFVEGKMVAALRALGADYVLDTNFSADLTIMEEASELVERITEKKKPLPQFTS 166
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + E +LP IS KSP + G IKT+ A+K + P I +V + PC
Sbjct: 167 CCPAWVKFAETFYPE-LLPNISSAKSPIGMQGPTIKTYFAKKNNIDPKKIVNVAVTPCTA 225
Query: 248 KKLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E R + N G RD+D VIT EL + L E G+L
Sbjct: 226 KKFEIRRGEMNISAKANGSEGMRDMDHVITTRELAMWLKEEGIDI-------GVL----- 273
Query: 303 EHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVEF---KPLRNPD-IRE 352
E + L+ +G+G G V+ A R L GE+P ++ +P+R + +RE
Sbjct: 274 EDEAYDSLMGPASGAGVIFGNTGGVMEAAARTAYYLVTGENPPSDYLCLEPVRGMEGVRE 333
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
AT G + +R + +G N + I+++K++ YDFIE+M C GC+ GG Q + +
Sbjct: 334 ATVEMGGLPIRLAVIHGTENARTFIEQMKKEDKSYDFIEVMTCKGGCIGGGGQPKTQVPM 393
Query: 413 SPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ + +E++ AK R EN ++ +Y + G + + ML+TSY++
Sbjct: 394 TDEVRKARIESLYAKDAKMTLRYSHENPDIKRVYSEFYGKPLSQAAEEMLHTSYYS 449
>gi|352685609|ref|YP_004897594.1| NADH dehydrogenase I subunit G [Acidaminococcus intestini RyC-MR95]
gi|350280264|gb|AEQ23454.1| NADH dehydrogenase I subunit G [Acidaminococcus intestini RyC-MR95]
Length = 580
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 201/412 (48%), Gaps = 45/412 (10%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTI-VLSLAIQPV 125
I +DC C CIT + + + R++ S+ N + I ++ +A
Sbjct: 186 IKDSDCTLCGQCITHCPTAGLRE----------RDDTDKVYSALANPELIPIVQIAPAVR 235
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
+L + +S E + KL +R+G V D +++E NEFL++F +G
Sbjct: 236 TALCEAYGVSPQEAPMGKLAAALRRMGFRYVYDTCFGADLTIMEEANEFLEKFKNGKTKK 295
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
PLFTS CPGWV + + E + +S KSPQQ+ G++ KT LA+KLG P ++ V+
Sbjct: 296 FPLFTSCCPGWVRFLKGKFPE-LTDRLSTSKSPQQMFGAIAKTWLAKKLGTEPEKLFLVS 354
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGILDWP 300
+MPC KK E + +DVDCV+T E + +L A+ + L+EE LD P
Sbjct: 355 IMPCLAKKAECDLPTMQTQH--GKDVDCVLTTREFIRMLNADRIYPHLLKEEP---LDDP 409
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQL---CPGESPVVE-FKPLRN-PDIRE 352
H TG+G G V+ A+R G+ P + F +R P +RE
Sbjct: 410 MGTH----------TGAGTIFGVTGGVMEAALRTAYYEVTGKDPDPDLFADIRTGPALRE 459
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNE 409
T+T G + + +G N ++L++ +K ++ YDF+E+MACP GC GG Q I +E
Sbjct: 460 RTYTLGGADVHCAVVSGLGNARHLLEAIKAGKVHYDFVEVMACPGGCSGGGGQPISIDDE 519
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
+ A + + L + +A N +E LY +LG ++K + +L+T
Sbjct: 520 ERAEARGQS--LYALDQKMALRLSHRNPQIEALYAEFLGSPLSEKAEELLHT 569
>gi|239616580|ref|YP_002939902.1| hydrogenase, Fe-only [Kosmotoga olearia TBF 19.5.1]
gi|239505411|gb|ACR78898.1| hydrogenase, Fe-only [Kosmotoga olearia TBF 19.5.1]
Length = 584
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 198/409 (48%), Gaps = 22/409 (5%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I+ TDC+ C C T IT++ + +V E H+ K +V+ A +
Sbjct: 184 IAATDCINCGQCATVCPVGAITERM--DFRRVAEELYKHE-------KVLVVQTAPAVRV 234
Query: 127 SLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
+LG +F + K+ ++LG D V D A +++E +E L R GG P+
Sbjct: 235 ALGEEFGEEPGTISTGKMVAALRKLGFDYVFDTDFAADLTIMEEGSELLQRIKEGGKFPM 294
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGWV EK + EF +S KSP +++G+LIKT+ A+K+G P I+ V++MP
Sbjct: 295 FTSCCPGWVNLMEKLYPEF-RENLSTAKSPHEMLGALIKTYFAKKIGKDPKDIFVVSVMP 353
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWPWDE 303
C KK EA R G+ VD VIT EL L+ ++ +L EE+ D P
Sbjct: 354 CTAKKDEAERETLLVR--GHVAVDAVITTRELGKLIKMKKIPYESLPEEE---YDTPLGI 408
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTL 362
++ +GG L A E P ++F+ +R + ++EA L
Sbjct: 409 STGAAVIF---GATGGVMEAALRTAYELYTGKELPKLDFEFVRGFEGVKEAEVDLDGKIL 465
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELE 422
+ +A+G N+ L+ K+K + YDF+EIMACP GC+ GG Q ++ + + +
Sbjct: 466 KVAVAHGGANVVKLMDKIKSGEVYYDFVEIMACPGGCIGGGGQPKSTRPDYLERRMQAIY 525
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
I ++ + EN ++ +Y+ +L + +L+T Y + K+ +
Sbjct: 526 EIDENMPIRKSHENPAIKKIYEEYLEHPLSHISHELLHTHYLDRKKSVV 574
>gi|449115934|ref|ZP_21752394.1| hydrogenase, Fe-only [Treponema denticola H-22]
gi|448955420|gb|EMB36187.1| hydrogenase, Fe-only [Treponema denticola H-22]
Length = 596
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 189/409 (46%), Gaps = 31/409 (7%)
Query: 67 ISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+ DC C CIT L + E+ + + + + K +V+ +A
Sbjct: 183 IADADCSLCGQCITHCPVGALRERDDTEKFWRAVADPD----------KVVVVQVAPAIR 232
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG---G 181
+ G L + V K+ KR+G D V D + +++E EF++RF G
Sbjct: 233 TAWGEHIGLDLKDASVNKIFDALKRIGADYVFDTAFSADLTIMEEAYEFIERFSRGELKD 292
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS ++ ++S KSP Q+ G+++K++ AEK+G P I+ V
Sbjct: 293 KPMFTSCCPGWVRFI-KSQYPHLVSHLSSAKSPMQMFGAVMKSYFAEKIGKKPEDIFSVA 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL--ANELATTTLQEEKDGILDW 299
+MPC KK E FY E G+ D+DCV+T E ++ A+ L T + E D +
Sbjct: 352 IMPCVAKKSEIDMELFYGEYAGH-DMDCVLTTREFVRMIKSAHILPQTLKETEPDKLF-- 408
Query: 300 PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-----IREAT 354
H+ ++ G +GG L A + P FK +R+ I EA+
Sbjct: 409 ----HDASGAGIIFG-ATGGVMEAALRTAYYAIMGKNCPPDAFKVVRHSSQEESGIIEAS 463
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
FT + LR + +G N + LI ++ YDF+EIMACP GC+ GG Q +E
Sbjct: 464 FTLKENNLRIAVTSGLANTRRLIDSIEAGEKHYDFVEIMACPGGCVGGGGQPIHESGELA 523
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ L I + EN ++ LY + ++ K +L+T +
Sbjct: 524 VKRGSNLYFIDKNSKVRYSHENECIKALYNDFFEKPNSHKAHSLLHTDH 572
>gi|379010694|ref|YP_005268506.1| iron hydrogenase HydA2 [Acetobacterium woodii DSM 1030]
gi|375301483|gb|AFA47617.1| iron hydrogenase HydA2 [Acetobacterium woodii DSM 1030]
Length = 459
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 203/440 (46%), Gaps = 53/440 (12%)
Query: 60 EKLKKVEISLTDCLACSGCITSAES-VLITQQSHEEVMKVIRENNA--------HKASSN 110
E K EI+ C+ C C+ +S V I + + +E N A +N
Sbjct: 28 EPGKGQEINYDKCVMCGQCVQKCKSYVSIVDHGVKAYERKRQERNLPASIKEPLFAAYNN 87
Query: 111 ENTKTIVLSLAIQPVLSL-----------GAKFALSHEQVVA-KLCGFFKRLGVDLVLDV 158
N + +LA V+++ F V A KL ++G D V D
Sbjct: 88 CNLDKVKAALADPDVITMVQCAPAVRVGIAEDFGAELGTVAAGKLAAALHKIGFDRVYDT 147
Query: 159 GIAHCFSLVELENEFLDRFLSGGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
+++E E + R G G P+FTS CP WV + E+++ + ++S KSPQQ
Sbjct: 148 NFTADLTIMEEGTELIKRITEGAGKLPMFTSCCPAWVTFLERNYPD-QKDHLSTCKSPQQ 206
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL 276
MG++ KT+ A+ P+ I+ V++MPC K+ E +R + + GY+D+D IT EL
Sbjct: 207 -MGAIFKTYGAKLDNYDPAKIFTVSVMPCTCKEFECNREEMNSS--GYQDIDVAITTREL 263
Query: 277 EVLLAN-ELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR-- 330
L+ + ++ L +E D P E+ TG+G G V+ AIR
Sbjct: 264 AYLIKDMDIDFNALADED---FDQPLGEY----------TGAGTIFGVTGGVMEAAIRTG 310
Query: 331 -QLCPGES-PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPY 387
+L G+ P ++ +R + R AT GD+ L+ I G N+ +++ LK +L
Sbjct: 311 YELITGKPIPDIDVSAVRGSNAFRTATLKVGDLDLKVGIVTGLANVIPVMEDLKAGKLDL 370
Query: 388 DFIEIMACPSGCLNGGAQ----IRNEKVASPKETALELETILCDLAKSEPRENATLEHLY 443
FIE+M CP GC++GG Q + +EK A+ + + T +L + EN + +Y
Sbjct: 371 HFIEVMTCPVGCVSGGGQPKLLLDSEKEAAYESRTKGIYTHDAELPIRKSHENPAITKIY 430
Query: 444 KAWLGGKSTDKGKHMLNTSY 463
+ +L + + HML+T Y
Sbjct: 431 EEYLLSPNGKESHHMLHTHY 450
>gi|168211789|ref|ZP_02637414.1| [Fe] hydrogenase [Clostridium perfringens B str. ATCC 3626]
gi|170710254|gb|EDT22436.1| [Fe] hydrogenase [Clostridium perfringens B str. ATCC 3626]
Length = 696
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 196/420 (46%), Gaps = 45/420 (10%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C + IT+ V A S ++ K +++S + +SLG +
Sbjct: 58 CINCGQCANVCPTSSITE--------VFDYKKVQDAISYKD-KIVIVSTSPAVRVSLGEE 108
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTSE 188
F ++ V K+ ++LG D VLD A ++VE +E ++R PL FTS
Sbjct: 109 FNMNDGSFVQGKMIALLRKLGFDYVLDTNFAADMTIVEEASELVERITKNNKPLPQFTSC 168
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP WV YAE H E IL +IS KSP + G IKT+ A+K+G+ PS I +V L PC K
Sbjct: 169 CPAWVKYAETFHQE-ILDHISTSKSPIGMQGPTIKTYFAKKMGIDPSKIVNVALTPCTAK 227
Query: 249 KLEASRAD------FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
K E R + +Y E RD+D VIT E+ + K+ +D+
Sbjct: 228 KFEIKREEMNASGRYYGIE-NMRDMDYVITTREVAIWA------------KEKGIDFNSL 274
Query: 303 EHNPHRMLLVNGTGSGGYAHN---VLSHAIR---QLCPGESPVVEFKPLRN----PDIRE 352
E + L+ +G+G N V+ A+R + E P +F L + +RE
Sbjct: 275 EDSNFDKLMGEASGAGVIFANTGGVMEAALRTAYKYITKEDPPKDFYDLESVRGMEGVRE 334
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
A+F D+ + + G N I K+K + Y FIE+M CP GC+ GG Q +++K
Sbjct: 335 ASFKINDLEINIAVIYGTENASKFISKMKNEDKKYHFIEVMTCPGGCIGGGGQPKDKKFE 394
Query: 413 SPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
K ++ + + + R EN ++ LY+ + ++ + ML+T+Y + K+
Sbjct: 395 GDKLREKRIDGLYKRDSNMKLRVSYENEEIKKLYEEFYEKPLSNLAEEMLHTTYFDRSKD 454
>gi|336421190|ref|ZP_08601350.1| hypothetical protein HMPREF0993_00727 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336002549|gb|EGN32658.1| hypothetical protein HMPREF0993_00727 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 708
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 196/416 (47%), Gaps = 45/416 (10%)
Query: 72 CLACSGCITSAESVLITQ-QSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C IT+ + EV + I++ + K ++ S + + LG
Sbjct: 57 CIHCGQCANVCPVNSITEVYEYGEVKEAIKDPD----------KIVIFSTSPSVRVGLGE 106
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTS 187
F ++ V K+ + LG D VLD + +++E +E ++R PL FTS
Sbjct: 107 AFGMAPGSFVEGKMVAALRALGADYVLDTNFSADLTIMEEASELVERITEKKKPLPQFTS 166
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + E +LP IS KSP + G IKT+ A+K + P I +V + PC
Sbjct: 167 CCPAWVKFAETFYPE-LLPNISSAKSPIGMQGPTIKTYFAKKNNIDPKKIVNVAVTPCTA 225
Query: 248 KKLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E R + N G RD+D VIT EL + L E G+L
Sbjct: 226 KKFEIRRGEMNISAKANGSEGMRDMDHVITTRELAMWLKEEGIDI-------GVL----- 273
Query: 303 EHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVEF---KPLRNPD-IRE 352
E + L+ +G+G G V+ A R L GE+P ++ +P+R + +RE
Sbjct: 274 EDEAYDSLMGPASGAGVIFGNTGGVMEAAARTAYYLVTGENPPSDYLCLEPVRGMEGVRE 333
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
AT G + +R + +G N + I+++K++ YDFIE+M C GC+ GG Q + +
Sbjct: 334 ATVEMGGLPIRLAVIHGTENARTFIEQMKKEDKSYDFIEVMTCKGGCIGGGGQPKTQVPM 393
Query: 413 SPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ + +E++ AK R EN ++ +Y + G + + ML+TSY++
Sbjct: 394 TDEVRKARIESLYAKDAKMTLRYSHENPDIKRVYSEFYGKPLSQAAEEMLHTSYYS 449
>gi|374813428|ref|ZP_09717165.1| iron hydrogenase 1 [Treponema primitia ZAS-1]
gi|342308723|gb|AEL20834.1| HydA1 [Treponema primitia ZAS-1]
Length = 454
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 171/344 (49%), Gaps = 40/344 (11%)
Query: 141 AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKS 199
K+ +RLG V D + +++E E + R G P+FTS CPGWV Y E +
Sbjct: 131 GKMAAGLRRLGFKKVYDTNFSADLTIMEEGTELVKRVTEKGVLPMFTSCCPGWVRYMENT 190
Query: 200 HGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYN 259
H E + ++S KSPQQ+ G++ KT+ A+ V + +Y+V++MPC K EA+R + +
Sbjct: 191 HPE-LTKHLSSCKSPQQMAGAVFKTYGAKLDAVEGAKVYNVSVMPCTCKTFEAAREEMNS 249
Query: 260 EELGYRDVDCVITAVELEVLLAN---ELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG 316
G++D+D VIT EL LL +LAT +E D P E+ TG
Sbjct: 250 S--GWQDIDVVITTRELGYLLKYKGIDLATMPDEE-----FDMPLGEY----------TG 292
Query: 317 SG---GYAHNVLSHAIRQ----LCPGESPVVEFKPLR-NPDIREATFTCGDVTLRFCIAN 368
+G G V+ AIR + E V+ +R N R A GD+TL+ +
Sbjct: 293 AGAIFGVTGGVMEAAIRTGYTLITGKELKDVDINAVRGNEGFRRAEIKAGDLTLKVGVVT 352
Query: 369 GFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELET---IL 425
+NI +I++L+ L F+E+M CP GC++GG Q K+ S +TA ++
Sbjct: 353 NLKNIDPVIEQLQAGTLDAHFVEVMTCPEGCISGGGQ---PKLLSDTDTAEAYQSRRKAT 409
Query: 426 CDLAKSEPR----ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
D K+ P+ E+ ++ +Y +L + K +L+TSY +
Sbjct: 410 YDHDKALPKRKSHESGAIKKIYAEFLEKPNGHKSHELLHTSYKS 453
>gi|169831700|ref|YP_001717682.1| hydrogenase, Fe-only [Candidatus Desulforudis audaxviator MP104C]
gi|169638544|gb|ACA60050.1| hydrogenase, Fe-only [Candidatus Desulforudis audaxviator MP104C]
Length = 615
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 209/412 (50%), Gaps = 48/412 (11%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C++C C+ S + +T++ + EV K I ++ + +V+ A ++LG
Sbjct: 214 CISCGQCLMSCPTGALTEREYIHEVWKAI----------DDPDRQVVVQTAPAIQVTLGE 263
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTS 187
+F + VV K+ +R+G D V A +++E +E L+R L G G PL +S
Sbjct: 264 EFGMPVGTVVTGKMVSALRRIGFDTVFSTEFAADLTIMEEAHELLER-LEGKGDLPLISS 322
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
PGWV + E + EF L +S KSPQ+++G+L+K++ AEK G+ P+ + V +MPC
Sbjct: 323 CSPGWVKFCEHYYPEF-LDNLSTCKSPQEMLGALVKSYYAEKEGLDPARLVTVAVMPCTA 381
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA+R + + E G RDVD V+T E+ ++ A L+ +DG D P
Sbjct: 382 KKFEAARPELVSRE-GRRDVDFVLTTREVARMIRQ--AGIDLETLEDGEFDRP------- 431
Query: 308 RMLLVNGTGSG---GYAHNVLSHAIR---QLCPGESPV-VEFKPLRNPD-IREATFTCGD 359
L TG+G V+ AIR L GE V+FK +R + +R A
Sbjct: 432 ---LGIATGAGVIFAATGGVMEAAIRTAYALTEGEEMARVDFKAVRGLNGVRLAEVHLRG 488
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNG------GAQIRNEKVAS 413
TL+ +A+G RN + L++++K Y F+EIM CP GC+ G GA R
Sbjct: 489 RTLKLAVAHGTRNARRLLEQIKAG-AEYHFLEIMGCPGGCIGGGGQPILGAGRRELAQEY 547
Query: 414 PKETALELETILCDLAKSEPR--ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
++ A L +I DL + R EN + LY+ +LG +DK K +L+T+Y
Sbjct: 548 RRKRAEALYSI--DLKRELRRAHENPAVRKLYEEYLGHPLSDKAKELLHTTY 597
>gi|414153013|ref|ZP_11409340.1| Iron hydrogenase 1 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411455395|emb|CCO07242.1| Iron hydrogenase 1 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 593
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 182/372 (48%), Gaps = 41/372 (11%)
Query: 110 NENTKTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVE 168
++ TK +V+ A +++ +F + V KL +RLG D V+D +++E
Sbjct: 223 DDPTKHVVVQTAPAVRVAIAEEFGMEPGTVSTGKLVAALRRLGFDSVMDTDFTADLTIIE 282
Query: 169 LENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA 227
NEF+ R GG P+ TS PGW+ Y E + + +L ++S KSPQQ+ G+L+KT A
Sbjct: 283 EGNEFIKRVTEGGVLPMITSCSPGWIKYIEMYYPD-LLAHLSTCKSPQQMFGALVKTFYA 341
Query: 228 EKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATT 287
EK G+ P+ I V++MPC KK EA R + + GY+DVD V+T EL +L
Sbjct: 342 EKKGIDPASIVSVSIMPCTAKKFEAQRDELKDS--GYQDVDVVLTTRELGRML------- 392
Query: 288 TLQEEKDGILDW---PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQ----LCPGESPVV 340
++ +DW P ++++ L G V+ A+R + P +
Sbjct: 393 -----REIGIDWENLPDEDYDAPMGLSTGAAVIFGATGGVMEAAVRTVYEVITKEPMPDI 447
Query: 341 EFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
P+R + I+EAT GD+ ++ +A+ N + L+ K++ Y FIEIM CP GC
Sbjct: 448 NLTPVRGMEGIKEATLKVGDLDVKVAVAHTLGNARKLLDKIRAGEADYHFIEIMCCPGGC 507
Query: 400 LNGGAQIRNEKVASPKETALELETILC--------DLAKSEPRENATLEHLYKAWLGGKS 451
+ GG Q P T LE+ DL + EN ++ +Y+ +LG
Sbjct: 508 IGGGGQ--------PIPTNLEVRLKRIGGIYKADEDLPIRKSHENPAIKAIYEEFLGQPL 559
Query: 452 TDKGKHMLNTSY 463
+K +L+T Y
Sbjct: 560 GEKSHKLLHTHY 571
>gi|374994233|ref|YP_004969732.1| hydrogenase, Fe-only [Desulfosporosinus orientis DSM 765]
gi|357212599|gb|AET67217.1| hydrogenase, Fe-only [Desulfosporosinus orientis DSM 765]
Length = 580
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 199/429 (46%), Gaps = 27/429 (6%)
Query: 44 RIQDDGAYIQETNGREEKLK---KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIR 100
++Q G Y G E +K + +S T C C C+ + +T+ ++V KV +
Sbjct: 164 QVQTVGVYSAVGRGFETVIKTAFNLPLSQTACTFCGQCLAVCPTGALTEL--DQVDKVWK 221
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVG 159
+ N+ K +V+ A ++LG +F L +V K+ +RLG D V D
Sbjct: 222 -------ALNDPDKFVVVQTAPAVRVALGEEFGLEPGTIVTGKMVAALRRLGFDRVFDTD 274
Query: 160 IAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVM 218
A +++E E + R GG PL TS CP WV + E + +L S KSP Q++
Sbjct: 275 FAADLTIMEEATELVHRIQHGGRLPLLTSCCPAWVKFFEHQFPD-LLDIPSTCKSPHQML 333
Query: 219 GSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEV 278
G L K++ A+ LG+ P I V++MPC KK EA R + ++ DVD VIT EL
Sbjct: 334 GVLTKSYYAKTLGIDPKSITVVSVMPCVAKKYEADRPEL-SQGTDTADVDIVITTRELAR 392
Query: 279 LLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP 338
++ A+ KD D P E ++ +GG L A L
Sbjct: 393 MVRE--ASIHFDHLKDQEFDHPLGESTGAAVIF---GATGGVLEAALRTAYEVLTGDTLE 447
Query: 339 VVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPS 397
VEF+ LR + I+EA G R + +G N + +++K++ YD IEIMACP
Sbjct: 448 KVEFEALRGMEGIKEAVIPIGGRDYRIAVIHGLGNARTVLEKIQAGESNYDVIEIMACPG 507
Query: 398 GCLNGGAQIR---NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDK 454
GC+ GG Q N ++ + A+ E L KS EN + LYK +LG +
Sbjct: 508 GCIGGGGQPYHHGNMEILKARAGAIYREDRGKPLRKSH--ENLAIIGLYKDFLGEPFGKR 565
Query: 455 GKHMLNTSY 463
+L+TSY
Sbjct: 566 AHQLLHTSY 574
>gi|374579235|ref|ZP_09652329.1| hydrogenase, Fe-only [Desulfosporosinus youngiae DSM 17734]
gi|374415317|gb|EHQ87752.1| hydrogenase, Fe-only [Desulfosporosinus youngiae DSM 17734]
Length = 580
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 203/436 (46%), Gaps = 29/436 (6%)
Query: 45 IQDDGAYIQETNGREEKLK---KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE 101
+Q G Y G E +K + +S T C C CI + +T+ ++V KV +
Sbjct: 165 VQTVGVYSAVGRGFETVIKTAFDLPLSQTACTFCGQCIAVCPTGALTEL--DQVDKVWK- 221
Query: 102 NNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGI 160
+ N+ + +V+ A ++LG +F L +V K+ +RLG D V D
Sbjct: 222 ------ALNDPNQFVVVQTAPAVRVALGEEFDLEPGTIVTGKMVAALRRLGFDRVFDTDF 275
Query: 161 AHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMG 219
A +++E E + R GG PL TS CP WV + E + +L S KSP +++G
Sbjct: 276 AADLTIMEEATELVHRIKHGGRLPLLTSCCPAWVKFFEHQFPD-LLDIPSTCKSPHEMLG 334
Query: 220 SLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVL 279
LIK++ A LG+ P I V++MPC KK EA+R + ++ DVD VIT EL +
Sbjct: 335 VLIKSYYARTLGIDPKTITVVSVMPCVAKKYEAARPEL-SQGAETADVDIVITTRELARM 393
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV 339
+ A+ KD D P E ++ +GG L A +
Sbjct: 394 IRE--ASIHFDHLKDQEFDHPLGESTGASVIF---GATGGVLEAALRTAYEVITGETLEK 448
Query: 340 VEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSG 398
VEF+ LR D ++EA R + +G N + +++K++ YD IEIMACP G
Sbjct: 449 VEFEALRGMDGLKEAVIPIAGQDYRAAVIHGLGNARKVLEKIQAGESNYDVIEIMACPGG 508
Query: 399 CLNGGAQIR---NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKG 455
C+ GG Q N + + + AL E L KS EN + LYK +LG ++
Sbjct: 509 CIGGGGQPYHHGNLDILADRAGALYREDRAKPLRKSH--ENPAIIGLYKDYLGEPYGERA 566
Query: 456 KHMLNTSYHNIPKNNI 471
+L+TSY +P+ I
Sbjct: 567 HKLLHTSY--VPRKKI 580
>gi|227499382|ref|ZP_03929493.1| ferredoxin hydrogenase [Anaerococcus tetradius ATCC 35098]
gi|227218586|gb|EEI83826.1| ferredoxin hydrogenase [Anaerococcus tetradius ATCC 35098]
Length = 577
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 194/406 (47%), Gaps = 28/406 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C C C++ + +T++++ EV K++ + K +++ +A +SL
Sbjct: 192 TTCTFCGQCLSVCPTGALTEKNNVAEVWKLLASD-----------KHVIVQVAPAVRVSL 240
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLF 185
F + V K+ K LG V D A +++E NEF+ R L G G P+
Sbjct: 241 AEMFGMEVGLNVEGKIVRALKTLGFSKVFDTNFAADLTIMEEANEFIHR-LKGEGRLPIL 299
Query: 186 TSECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS CP WV + E+ + I +P S KSP ++ G++ K++ A+K G+ P I V++MP
Sbjct: 300 TSCCPAWVNFMEQQFSDMIDIP--SSCKSPHEMFGAIAKSYYAKKEGIDPKDIVVVSVMP 357
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK EA R + NE G+ DVD VIT EL ++ +D D P E
Sbjct: 358 CISKKYEAKRDELENE--GFSDVDTVITTRELAQMIKE--VGIDFASLEDQAFDNPMGES 413
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLR 363
+ GT SGG + A L E VEF+ R + I+ A+ ++
Sbjct: 414 TGAGDIF--GT-SGGVIEATVRTAYDMLTGKELEKVEFRDFRGLEGIKYASVDIDGREIK 470
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASPKETALELE 422
+ANG N + L++KLK K + D IE+MACP GC+ GG Q + ++ K + L
Sbjct: 471 IAVANGLGNTRKLLEKLKNKEIDLDAIEVMACPGGCIGGGGQPFHHGDLSILKRRSNALY 530
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
+ + +N ++ LY +LG +DK +L+TSY PK
Sbjct: 531 QLDESKKLRKSYQNPYIKKLYDEFLGEPGSDKAISLLHTSYKARPK 576
>gi|167745819|ref|ZP_02417946.1| hypothetical protein ANACAC_00513 [Anaerostipes caccae DSM 14662]
gi|167654850|gb|EDR98979.1| rubredoxin [Anaerostipes caccae DSM 14662]
Length = 650
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 204/417 (48%), Gaps = 47/417 (11%)
Query: 72 CLACSGC--ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
C+ C C + ES+ T + +++V + +++ K +++S + +LG
Sbjct: 58 CINCGQCANVCPVESITETYE-YQQVREAVKDPE----------KIVIVSTSPSVRAALG 106
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FT 186
+F V K+ + LG D VLD + +++E +E ++R G PL FT
Sbjct: 107 EEFGTEEGMFVQGKMVALLRALGADYVLDTNFSADLTIMEEASELIERITKGTKPLPQFT 166
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV +AE + E +L +IS KSP + G IKT+ A+ +G+ P I +V L PC
Sbjct: 167 SCCPAWVKFAEIYYPE-LLDHISTAKSPIGMQGPTIKTYFAKLMGIDPEKIVNVALTPCT 225
Query: 247 DKKLEASRADFYNEELGY-----RDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R + + + Y RD+D VIT E L ANE + G+ D +
Sbjct: 226 AKKFEIRREEMKDAGISYGKEDMRDMDYVITTREA-ALWANEEKIDFM-----GLEDSDF 279
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ----LCPGESP--VVEFKPLRNPD-IR 351
D+ + G+G+G G + V+ A+R + ++P + + KP+R + ++
Sbjct: 280 DK------FMGEGSGAGVIFGNSGGVMEAALRTAYEFITKEKAPDILYDLKPVRGMEGVK 333
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
EA+ GD+T+ + G N + +I K+K Y FIE+M CP GC+ GG Q ++++
Sbjct: 334 EASLDIGDLTVNVAVVYGTGNARKMIDKVKSSDKQYHFIEVMTCPGGCIGGGGQPKDKEF 393
Query: 412 ASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+E++ + + R EN ++ LY+ + G ++ + ML+T YH+
Sbjct: 394 KGQIIQEKRIESLYRRDSGMQIRASHENKQIKKLYEEFYGEPLSELAEQMLHTMYHD 450
>gi|317470545|ref|ZP_07929933.1| iron only hydrogenase large subunit domain-containing protein
[Anaerostipes sp. 3_2_56FAA]
gi|316902060|gb|EFV23986.1| iron only hydrogenase large subunit domain-containing protein
[Anaerostipes sp. 3_2_56FAA]
Length = 650
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 198/410 (48%), Gaps = 33/410 (8%)
Query: 72 CLACSGC--ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
C+ C C + ES+ T + +++V + +++ K +++S + +LG
Sbjct: 58 CINCGQCANVCPVESITETYE-YQQVREAVKDPE----------KIVIVSTSPSVRAALG 106
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FT 186
+F V K+ + LGVD VLD + +++E +E ++R G PL FT
Sbjct: 107 EEFGTEEGMFVQGKMVALLRALGVDYVLDTNFSADLTIMEEASELIERITKGTKPLPQFT 166
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV +AE + E +L +IS KSP + G IKT+ A+ +G+ P I +V L PC
Sbjct: 167 SCCPAWVKFAEIYYPE-LLDHISTAKSPIGMQGPTIKTYFAKLMGIDPEKIVNVALTPCT 225
Query: 247 DKKLEASRADFYNEELGY-----RDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R + + + Y RD+D VIT E L A E L E D D
Sbjct: 226 AKKFEIRREEMKDAGISYGKEDMRDMDHVITTREA-ALWAKEEEIDFLSLE-DSDFDQFM 283
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRNPD-IREATFTCG 358
E + ++ N SGG L A + ++P + + KP+R + ++EA+ G
Sbjct: 284 GEGSGAGVIFGN---SGGVMEAALRTAYEFITKEKAPDILYDLKPVRGMEGVKEASLDIG 340
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
D+T+ + G N + +I K+K Y FIE+M CP GC+ GG Q ++++
Sbjct: 341 DLTVNVAVVYGTGNARKMIDKVKSSDKQYHFIEVMTCPGGCIGGGGQPKDKEFKGQIIQE 400
Query: 419 LELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+E++ + + R EN ++ LY+ + G ++ + ML+T YH+
Sbjct: 401 KRIESLYRRDSGMQIRASHENEQIKKLYEKFYGEPLSELAEQMLHTMYHD 450
>gi|303231922|ref|ZP_07318630.1| hydrogenase, Fe-only [Veillonella atypica ACS-049-V-Sch6]
gi|302513351|gb|EFL55385.1| hydrogenase, Fe-only [Veillonella atypica ACS-049-V-Sch6]
Length = 488
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 191/409 (46%), Gaps = 30/409 (7%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C + I ++S E + KA+ + K +V A + LG +
Sbjct: 58 CIHCGQCASICPFDSINERS---------EIDEVKAAIADPNKIVVFQTAPAVRVGLGEE 108
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTSE 188
F + V K+ ++LG D VLD +++E +E ++R L+G G P FTS
Sbjct: 109 FGMDAGTFVEGKMVAALRKLGGDYVLDTNFGADMTIMEEASELVERVLNGSGELPQFTSC 168
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP WV +AE + EF LP +S KSP + KT+ AEK+G+ + V + PC K
Sbjct: 169 CPAWVKFAETFYPEF-LPNLSTAKSPIAMQAPTQKTYFAEKMGIDAKQMVAVAVTPCTAK 227
Query: 249 KLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
K E R + Y E RD D IT EL L E E +D D E
Sbjct: 228 KFEIRRDEMNSSAEYWESPEMRDTDYCITTRELAKWLRAE--EVNFDELEDSTFDPLMGE 285
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRNPD-IREATFTCGDV 360
+ ++ N +GG + A + + ++P ++ F+ +R D REA GD
Sbjct: 286 ASGGGIIFGN---TGGVMEAAMRTAYKLVTGEDAPSTLIPFEAIRGMDGAREADVVIGDK 342
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALE 420
TL +G N++ I++++ + + YDFIE+MAC GC+ GG Q R + + K
Sbjct: 343 TLHVAAVHGTGNLRKFIERMRAENIHYDFIEVMACRGGCIGGGGQPRVKLPMADKAREAR 402
Query: 421 LETILCDLAKSEPR---ENATLEHLYKAWLGGKS-TDKGKHMLNTSYHN 465
+ ++ A+ + + +N ++ LY + GK + K HML+T++ N
Sbjct: 403 IASLYTRDAEVKVKASCDNPDIQKLYAEFFDGKPMSHKAHHMLHTTFVN 451
>gi|404369095|ref|ZP_10974441.1| hydrogenase, Fe-only [Fusobacterium ulcerans ATCC 49185]
gi|313688386|gb|EFS25221.1| hydrogenase, Fe-only [Fusobacterium ulcerans ATCC 49185]
Length = 680
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 200/414 (48%), Gaps = 35/414 (8%)
Query: 72 CLACSGCITSAESVLITQQ-SHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + IT++ ++++ + ++ + K ++ S + ++LG
Sbjct: 58 CINCGQCANVCPASSITEKYEYQQIAEAVKNKD----------KIVIFSTSPSVRVALGE 107
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTS 187
+F + +V K+ + LG + +LD A ++VE +E + R +G PL FTS
Sbjct: 108 EFGMEKGSLVEGKMVSLLRALGGNYILDTNFAADLTIVEEASELIQRITTGSKPLPQFTS 167
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV YAE H E ILP +S KSP + G IKT+ A+K+ + P I +V + PC
Sbjct: 168 CCPAWVKYAEIYHPE-ILPNLSTAKSPIGMQGPTIKTYFAKKMNIDPEKIVNVAVTPCTA 226
Query: 248 KKLEASRADFYN--EELG---YRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E R + + ++LG RD+D VIT EL L A E A + ++ D
Sbjct: 227 KKFEIRRDEMKDAGKKLGIEDMRDMDYVITTREL-ALWAKE-AGVDFKALEESSFDKVMG 284
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRN-PDIREATFTCGD 359
E ++ N +GG L A + ++P + E K +R I+EA GD
Sbjct: 285 ESTGAGIIFGN---TGGVMEAALRTAYEYVTHEKAPADLFELKEVRGMGGIKEAGIKVGD 341
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN-----EKVASP 414
+T+ + G N +I+K+K Y FIE+M CP GC+ GG Q ++ +++
Sbjct: 342 LTVNVAVIYGTENADKVIEKVKNGEKSYHFIEVMTCPGGCIGGGGQPKDLDAERDEINQK 401
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
+ +L + L + S EN+ + LYK + G ++ + ML+T Y++ K
Sbjct: 402 RIDSLYKKDTLTPIRSS--HENSEIIALYKEFYGHPLSELAEEMLHTQYYDRSK 453
>gi|187438956|gb|ACD10930.1| [FeFe]-hydrogenase [Blastocystis sp. NandII]
Length = 758
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 186/413 (45%), Gaps = 52/413 (12%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+C++C C + I +QSH + R A KA K +V+ A ++ G
Sbjct: 198 TECISCGQCNVVCPTGAIVEQSH-----IPRVKQAMKAG-----KVMVMQTAPATRVAFG 247
Query: 130 AKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F E K+ K LG V D +++E E L+R + G P+FTS
Sbjct: 248 ENFGREPGEITTGKMIACAKALGFQYVFDTNFGADMTIMEEGTELLERIKNNGPFPMFTS 307
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV AEK + E ILP +S +SP ++GS +KT+ A+K+ + P IY V+LMPC
Sbjct: 308 CCPGWVNMAEKCYPE-ILPNLSSCRSPHMMVGSTLKTYWAKKMNLKPEDIYVVSLMPCTA 366
Query: 248 KKLEASRADFY-NEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK E R + + +E+ + VD V+T EL E GI +W P
Sbjct: 367 KKDEIERKNMWLDEKTPF--VDAVLTTKELGDFCKQE-----------GITNWDNMAEMP 413
Query: 307 HRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGESPVVEFKPLRNPDIREATFTCGDV 360
L +G+G G + V+ A+R QL G KPL + EA D
Sbjct: 414 FDTPLGTSSGAGDIFGVSGGVMEAALRTAYQLQTG-------KPLEKIVVDEARGL--DG 464
Query: 361 TLRFCIANGFRNI----------QNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
T RF + + I + L++ +K + F+E MACP GC++GG Q + +
Sbjct: 465 TKRFSVDMNGKKINCAVVHSKFARELVENVKAGKEDLQFVEAMACPGGCISGGGQPHSNR 524
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ ++ + I +N ++ LYK + ++ K +L+T+Y
Sbjct: 525 ADTIEKRMNAIYKIDAGKTLRRSMDNPEIQTLYKEFFEKPNSHKAHELLHTTY 577
>gi|182625936|ref|ZP_02953701.1| [Fe] hydrogenase [Clostridium perfringens D str. JGS1721]
gi|177908849|gb|EDT71347.1| [Fe] hydrogenase [Clostridium perfringens D str. JGS1721]
Length = 696
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 195/420 (46%), Gaps = 45/420 (10%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C + IT EV + NA K +++S + +SLG +
Sbjct: 58 CINCGQCANVCPTSSIT-----EVFDYKKVQNAISYKD----KIVIVSTSPAVRVSLGEE 108
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTSE 188
F +++ V K+ ++LG D VLD A ++VE +E ++R PL FTS
Sbjct: 109 FNMNNGSFVQGKMIALLRKLGFDYVLDTNFAADMTIVEEASELVERITKNNKPLPQFTSC 168
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP W+ YAE H E IL +IS KSP + G IKT+ A+K+G+ PS I +V L PC K
Sbjct: 169 CPAWIKYAETFHPE-ILDHISTSKSPIGMQGPTIKTYFAKKMGIDPSKIVNVALTPCTAK 227
Query: 249 KLEASRAD------FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
K E R + +Y E RD+D VIT E+ + K+ +D+
Sbjct: 228 KFEIKREEMNASGRYYGIE-DMRDMDYVITTREVAIWA------------KEKGIDFNSL 274
Query: 303 EHNPHRMLLVNGTGSGGYAHN---VLSHAIR---QLCPGESPVVEFKPLRN----PDIRE 352
E + L+ +G+G N V+ A+R + E P +F L + +RE
Sbjct: 275 EDSNFDKLMGEASGAGVIFANTGGVMEAALRTAYKYITKEDPPKDFYDLESVRGMEGVRE 334
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
A+F D+ + + G N I K+K Y FIE+M CP GC+ GG Q +++K
Sbjct: 335 ASFKINDLEINIVVIYGTENASKFISKMKNSDKKYHFIEVMTCPGGCIGGGGQPKDKKFE 394
Query: 413 SPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
K ++ + + + R EN ++ LY+ + ++ + ML+T+Y + K+
Sbjct: 395 GDKLREKRIDGLYKRDSSMKLRVSYENEEIKKLYEEFYEKPLSNLAEEMLHTTYFDRSKD 454
>gi|392962882|ref|ZP_10328310.1| hydrogenase, Fe-only [Pelosinus fermentans DSM 17108]
gi|421056446|ref|ZP_15519363.1| hydrogenase, Fe-only [Pelosinus fermentans B4]
gi|421069758|ref|ZP_15530919.1| hydrogenase, Fe-only [Pelosinus fermentans A11]
gi|392437626|gb|EIW15488.1| hydrogenase, Fe-only [Pelosinus fermentans B4]
gi|392449723|gb|EIW26821.1| hydrogenase, Fe-only [Pelosinus fermentans A11]
gi|392451557|gb|EIW28543.1| hydrogenase, Fe-only [Pelosinus fermentans DSM 17108]
Length = 564
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 182/396 (45%), Gaps = 49/396 (12%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAH--KASSNENTKTIVLSLAIQPVLS 127
T C+ C C + I V+R + A K S++NTK IV +A +
Sbjct: 188 TKCVGCGQCSVVCPTGAI----------VVRNDTAKLWKELSDKNTKVIV-QIAPAVRVG 236
Query: 128 LGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLF 185
+G + S Q V+ ++ +R+G D V D F+++E EF R L+G PLF
Sbjct: 237 IGKELGFSEGQNVMGRIVAALRRIGFDEVFDTSTGADFTVLEEAEEFSKRLLTGDNLPLF 296
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CP WV YAE ++ + I IS +SP Q++ S++K H + V +MPC
Sbjct: 297 TSCCPAWVRYAELNYPQLI-KNISTCRSPMQMLASILKEHHRN----DEKRVVVVAVMPC 351
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA+R +F + + Y VD VIT EL L+ A E + +D P+
Sbjct: 352 TAKKQEAARDEFKEDGVPY--VDYVITTQELIHLIKE--ANLIFSEIEPEAVDMPF---- 403
Query: 306 PHRMLLVNGTGSG-----GYAHNVLSHAIRQLCPGESP----VVEFKPLRN-PDIREATF 355
GT SG G V IR+L +S + F +R ++EA
Sbjct: 404 --------GTTSGSGVIFGVTGGVTEAVIRRLSDDKSSFALRAIAFTGVRGMQGVKEARI 455
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKVASP 414
C ++ I +G +N +LI+ +++ YDF+E+M+CP GC+ G Q + N
Sbjct: 456 DCNGREVKIAIVSGLKNADDLIRSIQQGEKQYDFVEVMSCPGGCIGGAGQPVTNRDGKYN 515
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGK 450
+ L + ++ +SE EN ++ LY L GK
Sbjct: 516 RGAGLYNADRMSNIKRSE--ENPIIKELYDGMLKGK 549
>gi|134299508|ref|YP_001113004.1| hydrogenase [Desulfotomaculum reducens MI-1]
gi|134052208|gb|ABO50179.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Desulfotomaculum reducens MI-1]
Length = 593
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 199/411 (48%), Gaps = 50/411 (12%)
Query: 71 DCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
+C C C + IT+ ++ KV R + +++TK +V+ A +++
Sbjct: 193 NCTMCGQCTLVCPTGAITEV--DDTGKVWR-------ALDDSTKHVVVQTAPAVRVAIAE 243
Query: 131 KFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F + V KL +RLG D V+D A +++E NEF+ R GG P+ TS
Sbjct: 244 EFGMEPGTVSTGKLVAALRRLGFDSVMDTDFAADLTILEEGNEFIKRVTEGGVLPMITSC 303
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
PGW+ Y E + + +L ++S KSPQQ+ G+L+K+ AEK + P++I V++MPC K
Sbjct: 304 SPGWIKYIEMYYPD-LLAHLSTCKSPQQMFGALVKSFYAEKKAIDPANIVSVSIMPCTAK 362
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K EA R + + GY+DVD V+T EL +L ++ +DW + +
Sbjct: 363 KFEAQRDELRDS--GYQDVDIVLTTRELARML------------REIGIDWDNLSDDDYD 408
Query: 309 MLLVNGTGSG---GYAHNVLSHAIRQ----LCPGESPVVEFKPLRNPD-IREATFTCGDV 360
+ TG+ G V+ A+R L P + P+R + I+EAT GD+
Sbjct: 409 APMGLSTGAAVIFGVTGGVMEAAVRTVYEVLTKEAMPNINLTPVRGMEGIKEATLKVGDL 468
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALE 420
++ +A+ N + L+ K++ Y FIEIM CP GC+ GG Q P T LE
Sbjct: 469 DVKVAVAHTLGNARKLLDKIRAGEADYHFIEIMCCPGGCIGGGGQ--------PIPTNLE 520
Query: 421 LE------TILCD--LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ T D L + EN ++ +Y+ +LG +K +L+T Y
Sbjct: 521 VRLKRIAGTYRADEALPLRKSHENPAIKAIYEEFLGEPLGEKSHKLLHTHY 571
>gi|284049283|ref|YP_003399622.1| hydrogenase, Fe-only [Acidaminococcus fermentans DSM 20731]
gi|283953504|gb|ADB48307.1| hydrogenase, Fe-only [Acidaminococcus fermentans DSM 20731]
Length = 576
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 200/412 (48%), Gaps = 41/412 (9%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I +DC C CI + ++ + + ++A ++ + T+V + P +
Sbjct: 186 IKDSDCTLCGQCIIHCPVAGLRERDDTDRL--------YEALADPDKVTLV---QVAPAV 234
Query: 127 SLG--AKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
F L E+ + ++ ++LG D V D A +++E NEFL+RFL+G
Sbjct: 235 RTAWCEAFGLPREEGTIGRMAAALRQLGFDHVYDTTFAADLTIMEEANEFLERFLAGDTR 294
Query: 183 --PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+FTS CPGWV + + + E + +S KSPQQ+ G++ KT LA+KL V P +Y V
Sbjct: 295 EFPMFTSCCPGWVRFLKGQYPE-LTDRLSTSKSPQQMFGAIAKTWLADKLQVIPEKLYCV 353
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGILDW 299
++MPC KK E + + DVD +T E + VL A+ L + L EE LD
Sbjct: 354 SIMPCLAKKAECALPTMRTDH--GPDVDLALTTREFIRVLRADHLDPSLLPEEP---LDD 408
Query: 300 PWDEHNPHRMLLVNGTGS-----GGYAHNVLSHAIRQLCPGESPVVE-FKPLRNP-DIRE 352
P M G G+ GG L A +L GE+P E F PLRN +R+
Sbjct: 409 P--------MGTFTGAGTIFGTTGGVLEAALRTAYAKL-TGENPDPELFAPLRNGIGLRD 459
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRNEKV 411
A +T +R + +G N + LIQ LKRK + YDF+E+MACP GC GG Q I E
Sbjct: 460 AVYTIAGKEIRCAVVSGLGNTRQLIQALKRKEVHYDFVEVMACPGGCAGGGGQPIPQEDE 519
Query: 412 ASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L T+ EN ++ LY+ +LG + K + +L+T +
Sbjct: 520 ELEGVRGEQLRTLDKRSRFRFSHENPQIQRLYREFLGKPLSPKAEALLHTDH 571
>gi|134301119|ref|YP_001114615.1| hydrogenase [Desulfotomaculum reducens MI-1]
gi|134053819|gb|ABO51790.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Desulfotomaculum reducens MI-1]
Length = 594
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 187/402 (46%), Gaps = 29/402 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
+ C C C+ + +T+ H ++V + I + + H +++ A ++L
Sbjct: 208 SSCTYCGQCVMVCPTAALTEVYHTDKVWEAINDPDKH----------VIVQTAPAVRVAL 257
Query: 129 GAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + VV K+ KR+G D V D +++E +E + R + P+ T
Sbjct: 258 GELFGMEAGTVVTGKMVTALKRMGFDEVFDTDFGADLTIMEEASELIYRLKNNKTLPILT 317
Query: 187 SECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
+ CP WV + E E I +P S KSP + G++ KT+ AEK G+ P +I V++MPC
Sbjct: 318 NCCPAWVKFIEHQFPELIHVP--STCKSPHIMFGTIAKTYYAEKNGLDPDNIVVVSVMPC 375
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA R + + + +VD VIT EL ++ A + D D P E
Sbjct: 376 IAKKAEAKRPELTKD--AHNNVDIVITTRELGAMIKE--AGIEFVKLPDSEFDSPLGEST 431
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRF 364
++ GT +GG L A + VEF+ LR + +R AT GD L+
Sbjct: 432 GASVIF--GT-AGGVIEAALRTASEWMTGKPLDRVEFEELRGMEGVRRATVKIGDQELKI 488
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETALEL 421
IA+G N +++++ ++ R Y IEIMACP GC+ GG Q N ++ + A+
Sbjct: 489 GIASGLGNARHILEDIRDGRADYHAIEIMACPGGCIAGGGQPYHHGNHEIIKKRREAIYE 548
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E + KS EN + LYK +LG +L+T +
Sbjct: 549 EDRRKKVRKS--HENKEILELYKNYLGEPFGKLAHELLHTHF 588
>gi|302340161|ref|YP_003805367.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Spirochaeta smaragdinae DSM 11293]
gi|301637346|gb|ADK82773.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Spirochaeta smaragdinae DSM 11293]
Length = 583
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 203/439 (46%), Gaps = 42/439 (9%)
Query: 49 GAYIQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHK-- 106
G + E GR E ++ + S D L S CI + +H V + ++ K
Sbjct: 163 GVWALEFIGRGENVR-IAPSADDTLNDSPCIKCGQC-----SAHCPVGAIFEKDETGKLL 216
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFS 165
A+ + K + + +A ++LG F + ++ K+ ++LG+D V D + +
Sbjct: 217 AAIRDPEKHVAVQIAPAVRVALGEAFGMEPGEISTGKIYAALRKLGIDAVFDTNFSADLT 276
Query: 166 LVELENEFLDRFLSGGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK 223
++E +E + R G G P TS CP W + EK + + I P S KSP + G++ K
Sbjct: 277 IMEEGSELVQRLTKGTGAIPQITSCCPAWTDFMEKYYPDMI-PNFSTAKSPMMMQGAITK 335
Query: 224 THLAEKLGVHPSHIYHVTLMPCYDKKLEASRAD-FYNEELGYRDVDCVITAVELEVLL-A 281
T+ AEK + P++IY +MPC KK E +R + Y+ GY+DVD V+T EL L+ A
Sbjct: 336 TYYAEKKKIDPANIYSAAIMPCTAKKYEITRCEKMYSS--GYQDVDVVLTTRELARLIKA 393
Query: 282 NELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVE 341
+ +L++EK D P ++ + +GG L A + + E VE
Sbjct: 394 MGIDFASLKDEK---ADSPIGAYSGAGTIF---GVTGGVMEAALRTAHKLITGKELEKVE 447
Query: 342 FKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKR-----LPYDFIEIMAC 395
+R + +R+ ++ IA+G N+ ++ +++ R PY FIE+MAC
Sbjct: 448 VNEVRGVEGVRKGEVDIDGKKVKVAIAHGMANVSQILDEVRDAREKGEEPPYHFIEVMAC 507
Query: 396 PSGCLNGGAQ-------IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLG 448
GC++GG Q +R +++A + + + C EN + +YK +LG
Sbjct: 508 RGGCISGGGQPYGTTDEVRKKRIAGLYKDDVN-SAVRCS------HENPEISQIYKEFLG 560
Query: 449 GKSTDKGKHMLNTSYHNIP 467
K +L+T Y P
Sbjct: 561 EPLGHKSHELLHTGYTPRP 579
>gi|307719055|ref|YP_003874587.1| hypothetical protein STHERM_c13740 [Spirochaeta thermophila DSM
6192]
gi|306532780|gb|ADN02314.1| hypothetical protein STHERM_c13740 [Spirochaeta thermophila DSM
6192]
Length = 583
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 195/436 (44%), Gaps = 73/436 (16%)
Query: 66 EISLTD--CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
+I+L D C+ C C +H V + +++ + I + I
Sbjct: 183 DIALNDSPCIKCGQC-----------SAHCPVGAIYEKDDTRRVWEAIMDPEIHTVVQIA 231
Query: 124 PVLSLGAKFALSHEQ---VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
P + + A +E + K +RLG D + D +++E +EF++RF G
Sbjct: 232 PAVRVAIGEAFGYEPGTLLTGKTYAALRRLGFDAIFDTNFGADLTIMEEASEFVERFAHG 291
Query: 181 GGP--LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIY 238
GP L T+ CP WV Y EK + E I P+ S KSPQ ++ +++KT+ A+K G+ PS I+
Sbjct: 292 KGPIPLITTCCPSWVDYLEKYYPEMI-PHFSSAKSPQMMLAAMVKTYYAQKKGIDPSKIF 350
Query: 239 HVTLMPCYDKKLEASR-ADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL 297
V++MPC KK E R + Y+ GY+D D IT EL ++ + A D
Sbjct: 351 MVSVMPCTSKKYEIERDENMYSS--GYKDQDASITTRELARMIKS--AGIDFHNLPDEEA 406
Query: 298 DWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ----LCPGESPVVEFKPLRNPD- 349
D P + TG+G G V+ A+R + E VE+ P+R D
Sbjct: 407 DQPLGMY----------TGAGTIFGVTGGVMEAAVRTAYYFVTGKEMEKVEYTPIRGLDG 456
Query: 350 IREATFTCGDVTLRFCIANGFRNIQNLIQKLKR-----KRLPYDFIEIMAC--------- 395
++EAT +R +A+ N+Q ++ ++K+ K PY FIE+MAC
Sbjct: 457 VKEATLDIDGTQVRIAVAHSISNVQYVLDRVKQALKEGKEPPYHFIEVMACRGGCVGGGG 516
Query: 396 -PSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKS 451
P G + +IR ++ A I D +S R +N ++ LY+ +L
Sbjct: 517 QPYGATD---EIRAKRAAG----------IYTDDERSVYRCSHQNPAIKQLYEEFLEKPL 563
Query: 452 TDKGKHMLNTSYHNIP 467
++K L+T Y P
Sbjct: 564 SEKAHKYLHTHYTPRP 579
>gi|325971420|ref|YP_004247611.1| hydrogenase, Fe-only [Sphaerochaeta globus str. Buddy]
gi|324026658|gb|ADY13417.1| hydrogenase, Fe-only [Sphaerochaeta globus str. Buddy]
Length = 594
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 190/414 (45%), Gaps = 44/414 (10%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C C C + IT++S ++ A S+ + +V+ + P + +G
Sbjct: 194 CTNCGQCSLVCPTAAITEKSQQQ--------QVFDALSDPD---LVVLVQTAPAIRVGLG 242
Query: 132 FALSHEQ---VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
A+ ++ V ++ + LG D V D +++E E + R G P+ TS
Sbjct: 243 EAMGLKEGSLVTGRMVSALRSLGFDKVFDTQFTADLTIMEEAYELIHRLTHQGELPMITS 302
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
PGW+ + E + E + ++S KSPQQ+ G++ KT AE+ + P I V++MPC
Sbjct: 303 CSPGWIKFIETFYPEQV-GHLSSCKSPQQMFGAIAKTFYAEQANLDPRKIRVVSIMPCTA 361
Query: 248 KKLEASRA------DFYNEELG------YRDVDCVITAVELEVLLAN-ELATTTLQEEKD 294
KK EA R+ D++ E++ + DVD +T EL +L + + L+EE
Sbjct: 362 KKFEAGRSEMDSSFDYWKEKMNLGEDERFCDVDWALTTRELAKMLKQVGIDFSALKEEA- 420
Query: 295 GILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR-NPDIREA 353
D P ++ + SGG L A+ +L VEF LR IREA
Sbjct: 421 --FDDPLGASTGGAVIFAS---SGGVMEAALRTAVEKLTGSVLAEVEFAQLRERTGIREA 475
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS 413
GD T++ +AN N + L+ +++ PY FIE+M CP GCL GG Q + +
Sbjct: 476 ALQVGDSTIKVAVANTLSNARVLLDQIQGGTSPYAFIEVMTCPDGCLGGGGQ----PIPT 531
Query: 414 PKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ L+ + + + +P EN ++ LY +L ++ H+L+T+Y
Sbjct: 532 NADIRLKRAQSIYEEDRHKPIRKSHENPAIQDLYARFLDQPLSEMSHHLLHTTY 585
>gi|326201303|ref|ZP_08191175.1| hydrogenase, Fe-only [Clostridium papyrosolvens DSM 2782]
gi|325988871|gb|EGD49695.1| hydrogenase, Fe-only [Clostridium papyrosolvens DSM 2782]
Length = 562
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 191/410 (46%), Gaps = 41/410 (10%)
Query: 49 GAYIQETNGREEKLKKVEISLTDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKA 107
G+ +Q T + L++V DC+ C C + L+ ++ + A++A
Sbjct: 170 GSNLQVTTAFNKSLQEV-----DCVNCGQCRVVCPTGALMIKKDIDR---------AYEA 215
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSL 166
N+N K ++ +A +++G F L Q+ + K+ ++LG D V D + ++
Sbjct: 216 LQNKN-KRVIAQIAPAVRVAIGEDFGLQPGQISMGKIVAALRKLGFDQVFDTAVGADLTV 274
Query: 167 VELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
+E E +DR PLF+S CP W YAE+ H E ++ +S SP Q+ G++IK
Sbjct: 275 IEEAEELMDRIQRKEKLPLFSSCCPSWFKYAEQKHPE-LMENVSSCLSPMQMFGAVIKEQ 333
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA 285
++ + +MPC KK EA+R + N G R VD VIT EL +++
Sbjct: 334 FKKEKFSEEKENIVIAIMPCTAKKYEAARPE--NAINGERQVDMVITTQELAIMIQEN-- 389
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVV 340
E +D +D P+ +G G SGG + VL + ++ +
Sbjct: 390 GIVFNELEDEAIDMPFG--------FTSGAGVIFGVSGGVSEAVLRYYYKERNASALKGI 441
Query: 341 EFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
+ +R + ++EAT T+R + +G +N + LI+K+KR +DFIE+MACP GC
Sbjct: 442 SYSGVRGMEGVKEATAEIDGRTVRIGVVHGLKNAEKLIRKIKRGEEKFDFIEVMACPGGC 501
Query: 400 LNGGAQ--IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWL 447
+ G Q +NE V K A + + L +N T++ LY L
Sbjct: 502 IGGAGQPIPQNENVR--KLRAKGIYKVDKSLPIKRSDDNPTIDALYNGVL 549
>gi|15893326|ref|NP_346675.1| hydrogene dehydrogenase [Clostridium acetobutylicum ATCC 824]
gi|337735237|ref|YP_004634684.1| hydrogene dehydrogenase [Clostridium acetobutylicum DSM 1731]
gi|384456746|ref|YP_005669166.1| Hydrogene dehydrogenase [Clostridium acetobutylicum EA 2018]
gi|15022848|gb|AAK78015.1|AE007516_6 Hydrogene dehydrogenase [Clostridium acetobutylicum ATCC 824]
gi|557064|gb|AAB03723.1| hydrogenase I [Clostridium acetobutylicum ATCC 824]
gi|325507435|gb|ADZ19071.1| Hydrogene dehydrogenase [Clostridium acetobutylicum EA 2018]
gi|336292537|gb|AEI33671.1| hydrogene dehydrogenase [Clostridium acetobutylicum DSM 1731]
Length = 582
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 188/427 (44%), Gaps = 64/427 (14%)
Query: 66 EISLTD--CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAI 122
++ L D CL C C+ + + ++SH E+V + + N+ K +++++A
Sbjct: 181 DVCLDDSTCLLCGQCVIACPVAALKEKSHIEKVQEAL----------NDPKKHVIVAMAP 230
Query: 123 QPVLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
++G F + + + V KL + LG D V D+ +++E E L R + G
Sbjct: 231 SVRTAMGELFKMGYGKDVTGKLYTALRMLGFDKVFDINFGADMTIMEEATELLGRVKNNG 290
Query: 182 G-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+FTS CP WV A+ H E +L +S KSPQQ+ G+ KT+ G+ P +Y V
Sbjct: 291 PFPMFTSCCPAWVRLAQNYHPE-LLDNLSSAKSPQQIFGTASKTYYPSISGIAPEDVYTV 349
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
T+MPC DKK EA + E RD+D +T EL ++ + A + +DG +D
Sbjct: 350 TIMPCNDKKYEADIP--FMETNSLRDIDASLTTRELAKMIKD--AKIKFADLEDGEVDPA 405
Query: 301 WDEHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD---------I 350
M +G G+ G V+ AIR E K L N D I
Sbjct: 406 --------MGTYSGAGAIFGATGGVMEAAIRS----AKDFAENKELENVDYTEVRGFKGI 453
Query: 351 REATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
+EA L + NG N ++ K Y FIE+MACP GC+NGG Q
Sbjct: 454 KEAEVEIAGNKLNVAVINGASNFFEFMKSGKMNEKQYHFIEVMACPGGCINGGGQ----- 508
Query: 411 VASPKETALELE---------TILCD-----LAKSEPRENATLEHLYKAWLGGKSTDKGK 456
P AL+ E ++L + L+K + +N + +Y ++ G
Sbjct: 509 ---PHVNALDRENVDYRKLRASVLYNQDKNVLSKRKSHDNPAIIKMYDSYFGKPGEGLAH 565
Query: 457 HMLNTSY 463
+L+ Y
Sbjct: 566 KLLHVKY 572
>gi|335045978|ref|ZP_08539001.1| putative ferredoxin hydrogenase [Oribacterium sp. oral taxon 108
str. F0425]
gi|333759764|gb|EGL37321.1| putative ferredoxin hydrogenase [Oribacterium sp. oral taxon 108
str. F0425]
Length = 566
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 204/406 (50%), Gaps = 40/406 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL--S 127
+ C C CIT + + R++ + ++ +TIVL+ I P + +
Sbjct: 175 SSCALCGQCITHCPVGALRE----------RDDTDKILDALDDPETIVLA-QIAPSIRTA 223
Query: 128 LGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PL 184
G +F LS E+ V +L K +G D V D + +++E +EFL + G P+
Sbjct: 224 WGEEFGLSPEEATVERLSACLKEMGFDYVFDTDFSADLTIMEEASEFLHKLTHNEGQFPM 283
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGWV + + + EFI P +S KSPQQ+ G++ K++ A+ L V P I+ V++MP
Sbjct: 284 FTSCCPGWVRFIKSHYPEFI-PQVSTSKSPQQMFGAIAKSYYADILKVDPKKIFSVSIMP 342
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWPWDE 303
C KK E + + +++ G DVD +T E+ L+ A ++ L D LD P
Sbjct: 343 CLAKKAECAYPNMVDKD-GNFDVDVALTTREVNRLIRALHISPAKLS---DRALDMP--- 395
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREATF 355
L G+G+G G V+ A+R L GE+P + F+ +R + +E++F
Sbjct: 396 -------LGIGSGAGNIFGATGGVMEAALRTAYYLATGENPDPDAFQEVRGMEGWKESSF 448
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
T L+ + +G N L+ LK ++ YDF+E+MACP GC+ GG Q +++V
Sbjct: 449 TIAGNKLKIAVVHGLANADRLLNALKNGQVHYDFVEVMACPGGCVGGGGQPIHDQVEMAA 508
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
A L + + EN +++ +YK +LG ++ + +L+T
Sbjct: 509 LRAPVLYKQDREGSIRFSHENPSIKSVYKDYLGEPLSEIAEELLHT 554
>gi|402571252|ref|YP_006620595.1| hydrogenase, Fe-only [Desulfosporosinus meridiei DSM 13257]
gi|402252449|gb|AFQ42724.1| hydrogenase, Fe-only [Desulfosporosinus meridiei DSM 13257]
Length = 580
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 134/428 (31%), Positives = 202/428 (47%), Gaps = 27/428 (6%)
Query: 45 IQDDGAYIQETNGREEKLK---KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE 101
+Q G Y G E +K + +S T C C CI + +T+ ++V KV +
Sbjct: 165 VQTVGVYSAVGRGFETVVKTAFDLPLSKTACTFCGQCIAVCPTGALTEL--DQVDKVWK- 221
Query: 102 NNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGI 160
+ N+ + +V+ A ++LG F L +V K+ +RLG D V D
Sbjct: 222 ------ALNDPNQFVVVQTAPAVRVALGEGFGLEPGTIVTGKMVAALRRLGFDRVFDTDF 275
Query: 161 AHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMG 219
A +++E E + R GG PL TS CP WV + E + +L S KSP +++G
Sbjct: 276 AADLTIMEEATELVHRIQHGGRLPLLTSCCPAWVKFFEHQFPD-LLDIPSTCKSPHEMLG 334
Query: 220 SLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVL 279
LIK++ A+ LG+ P I V++MPC KK EA+R + ++ DVD VIT EL +
Sbjct: 335 VLIKSYYAKTLGIDPKTITVVSVMPCVAKKYEAARPEL-SQGAETADVDIVITTRELARM 393
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV 339
+ A+ K+ D P E ++ GT +GG L A L
Sbjct: 394 IRE--ASIHFDNLKEQEFDHPLGESTGASVIF--GT-TGGVLEAALRTAYEVLTGETLEK 448
Query: 340 VEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSG 398
VEF+ LR D ++EA R + +G N + +++K++ YD IEIMACP G
Sbjct: 449 VEFEVLRGMDGLKEAVVPIAGRDYRAAVVHGLGNARTILEKIQAGESDYDVIEIMACPGG 508
Query: 399 CLNGGAQIR---NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKG 455
C+ GG Q N ++ S + AL E L KS EN + LYK +LG ++
Sbjct: 509 CIGGGGQPYHHGNLEILSSRAEALYREDRAKPLRKSH--ENPAIIGLYKDFLGEPYGERA 566
Query: 456 KHMLNTSY 463
+L+TSY
Sbjct: 567 HKLLHTSY 574
>gi|355678906|ref|ZP_09061090.1| hypothetical protein HMPREF9469_04127 [Clostridium citroniae
WAL-17108]
gi|354812390|gb|EHE97008.1| hypothetical protein HMPREF9469_04127 [Clostridium citroniae
WAL-17108]
Length = 461
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 183/373 (49%), Gaps = 34/373 (9%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENE 172
K +V+S + +LG +F + V K+ + LGVD VLD A ++VE +E
Sbjct: 91 KIVVVSTSPSVRAALGEEFGMEEGSFVQGKMVALLRTLGVDYVLDTNFAADLTIVEEASE 150
Query: 173 FLDRFLSGGGPL--FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
+DR +G PL FTS CP WV +AE + + +LP+IS KSP + G IKT+ A K+
Sbjct: 151 LIDRITTGRRPLPQFTSCCPAWVKFAEIYYPD-MLPHISTAKSPIGMQGPTIKTYFARKM 209
Query: 231 GVHPSHIYHVTLMPCYDKKLEASR-----ADFYNEELGYRDVDCVITAVELEVLLANELA 285
G+ P I +V + PC KK E R A+ Y E RD+D VIT EL
Sbjct: 210 GIDPKKIVNVAVTPCTAKKYEIRRQEMKAAEEYLGEDDMRDMDYVITTREL--------- 260
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGESP- 338
Q + +D+ E + + L+ G+G+G G V+ A+R + GE
Sbjct: 261 ---AQWARMKRIDFSSLEDSDYDRLMGQGSGAGVIFGNTGGVMEAALRTAYEYITGEQAP 317
Query: 339 --VVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMAC 395
+ E P+R + +REA+ D+T+ + G +++ +++++ Y F+E+M C
Sbjct: 318 GVLYELTPVRGMEAVREASLQIADMTVNVAVVYGTASLRRFLEEMRNGEKQYHFVEVMTC 377
Query: 396 PSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKST 452
P GC+ GG Q +++K ++++ R EN ++ LY+ + +
Sbjct: 378 PGGCIGGGGQPKDKKFEGDALRQKRIDSLYKRDGAMTVRLSHENEEIKVLYQEFYKKPLS 437
Query: 453 DKGKHMLNTSYHN 465
+ + ML+TSY +
Sbjct: 438 ELAEKMLHTSYRD 450
>gi|345859646|ref|ZP_08811983.1| hydrogenase family protein [Desulfosporosinus sp. OT]
gi|344327242|gb|EGW38683.1| hydrogenase family protein [Desulfosporosinus sp. OT]
Length = 525
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 197/439 (44%), Gaps = 55/439 (12%)
Query: 52 IQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSN 110
IQ G E K EI C+ C C S IT++ ++V K + + N
Sbjct: 98 IQSVYGNYELPIKNEIV---CVNCGQCTQWCPSGAITERDDTDKVFKALADPNI------ 148
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVEL 169
T+V+ A + LG +F + V K ++LG D+V D +++E
Sbjct: 149 ----TVVVQTAPSTRIGLGEEFGMPVGTNVQGKQVAALRKLGFDVVFDTNFTADLTIMEE 204
Query: 170 ENEFLDRF---LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHL 226
E + R L P TS CPGWV + E + + I P +S KSPQQ+ G+L+KT+
Sbjct: 205 GTELVKRVTGELKKPTPQLTSCCPGWVKFVEYFYPDLI-PNLSSAKSPQQMEGTLMKTYY 263
Query: 227 AEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYR------DVDCVITAVELEVLL 280
AEK V P I+ V +MPC KK E R + + + DVD V+T EL ++
Sbjct: 264 AEKKNVDPKKIFSVAIMPCTAKKFECQRPEMVSASKELKDSKVTPDVDVVLTTRELARMI 323
Query: 281 ANELATTTLQEEKDGI--LDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---L 332
++ GI P D+++ L+ +GTG+G G V+ A R L
Sbjct: 324 -----------KRAGINFAALPDDQYD---QLMGSGTGAGAIFGTTGGVMEAAARSAYYL 369
Query: 333 CPGESP---VVEFKPLRN-PDIREATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPY 387
G+ P + + P+R ++EA V +++ + +G N + ++ +++ P+
Sbjct: 370 ITGQQPPSALWDLTPVRGMQGVKEAAVNIPGVGSVKVAVISGLTNARLVMDQIRSGNAPW 429
Query: 388 DFIEIMACPSGCLNGGAQIRNEKVASP---KETALELETILCDLAKSEPRENATLEHLYK 444
FIE+MACP GC GG Q R S A L I + +N ++ +Y
Sbjct: 430 VFIEVMACPGGCEYGGGQPRASSPPSDDVRNRRAASLYKIDANAKLRNSHDNPQIKQVYA 489
Query: 445 AWLGGKSTDKGKHMLNTSY 463
+L + K + +L+T+Y
Sbjct: 490 DFLTAPMSKKAEELLHTNY 508
>gi|310658216|ref|YP_003935937.1| putative catalytic subunit of iron-only hydrogenase ([Fe]
hydrogenase) [[Clostridium] sticklandii]
gi|308824994|emb|CBH21032.1| putative catalytic subunit of iron-only hydrogenase ([Fe]
hydrogenase) [[Clostridium] sticklandii]
Length = 577
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 191/404 (47%), Gaps = 28/404 (6%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKT-IVLSLAIQPV 125
I T C C C+ + +T+ NN K N+K +V+ A
Sbjct: 189 IHETTCTFCGQCLAVCPTAALTEV-----------NNVSKVWDAINSKKYVVVQTAPAVR 237
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
++LG +F + VV K+ + LG D V D A +++E +EF+ R GG P
Sbjct: 238 VALGEEFGMEPGTVVTGKMAAALRTLGFDKVFDTDFAADLTIMEEASEFVHRLEHGGKLP 297
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+ TS CPGWV + E + +L S KSP ++ G++ KT+LAEKL V P + V++M
Sbjct: 298 ILTSCCPGWVKFFEHQFSD-MLDIPSSCKSPHEMFGAVAKTYLAEKLDVKPEDMIVVSVM 356
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK E++R + + G +DVD VIT EL ++ A E +D D P E
Sbjct: 357 PCVAKKYESARPELGHG--GTKDVDIVITTRELAQMIKE--AGINFNELEDQDFDNPLGE 412
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTL 362
++ GT +GG L A L VEF+ LR D +EAT +
Sbjct: 413 STGASVIF--GT-TGGVIEAALRTAYEWLTKETLENVEFEALRGLDGTKEATVNINGQDI 469
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELE 422
+ + +G N + L++K++ Y IEIMACP GC+ GG Q + S + +E
Sbjct: 470 KIAVTHGLGNARALLEKIRAGEAEYHAIEIMACPGGCIGGGGQPYHHGDLSI--LSRRIE 527
Query: 423 TILC-DLAKS--EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
I D AK+ + EN ++ LY +LG K +L+T+Y
Sbjct: 528 GIYSEDRAKTIRKSHENPMIKQLYAEYLGEPYGHKAHELLHTTY 571
>gi|227498965|ref|ZP_03929102.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904414|gb|EEH90332.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 580
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 199/411 (48%), Gaps = 43/411 (10%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIV-LSLAIQPV 125
I +DC C CIT + + ++ + + A +N IV ++ A++
Sbjct: 186 IKDSDCTLCGQCITHCPTAGLRERDDT--------DKVYSALANPELIPIVQIAPAVRTA 237
Query: 126 LSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--- 182
L A E + KL +R+G V D +++E NEFL++F +G
Sbjct: 238 LC-EAYGVPPQEAPMGKLAAALRRMGFRYVYDTCFGADLTIMEEANEFLEKFKNGKTKKF 296
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CPGWV + + E + +S KSPQQ+ G++ KT LA+KLG P ++ V++
Sbjct: 297 PLFTSCCPGWVRFLKGKFPE-LTDRLSTSKSPQQMFGAIAKTWLAKKLGTEPEKLFLVSI 355
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVE-LEVLLANELATTTLQEEKDGILDWPW 301
MPC KK E + +DVDCV+T E + +L A+ + L+EE LD P
Sbjct: 356 MPCLAKKAECDLPTMQTQH--GKDVDCVLTTREFIRMLNADRIYPHLLKEEP---LDDPM 410
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQL---CPGESPVVE-FKPLRN-PDIREA 353
H TG+G G V+ A+R G+ P + F +R P +RE
Sbjct: 411 GTH----------TGAGTIFGVTGGVMEAALRTAYYEVTGKDPDPDLFADIRTGPALRER 460
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEK 410
T+T G + + +G N ++L++ +K ++ YDF+E+MACP GC GG Q I +E+
Sbjct: 461 TYTLGGADVHCAVVSGLGNARHLLEAIKAGKVHYDFVEVMACPGGCSGGGGQPISIDDEE 520
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
A + + L + +A N +E LY +LG ++K + +L+T
Sbjct: 521 RAEARGQS--LYALDQKMALRLSHRNPQIEALYAEFLGSPLSEKAEELLHT 569
>gi|451821180|ref|YP_007457381.1| NADP-reducing hydrogenase subunit HndC [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451787159|gb|AGF58127.1| NADP-reducing hydrogenase subunit HndC [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 562
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 194/411 (47%), Gaps = 51/411 (12%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I ++C++C C + I +S+ E K+ ++ N K K +V+ +A P +
Sbjct: 185 IGHSNCVSCGQCAAVCPTGAIVVRSNTE--KLWQDLNNPK-------KRVVVQIA--PAV 233
Query: 127 SLGAKFALSHE---QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+G L E + K+ +R+G D + D + +++E NEF+ + +
Sbjct: 234 RVGLGTQLGEEDGRNAMGKMAAALRRMGFDKIFDTSVGADLTVIEETNEFVSKLQNNEAL 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CP WV YAEK++ E ++ +S KSP + +++K H E + V +
Sbjct: 294 PLFTSCCPAWVNYAEKTYPE-LMKNVSSCKSPMGMFAAVLKEHYRE----DDRELVSVAI 348
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE--LATTTLQEEKDGILDWP 300
MPC KK EA+R +F N+ G DVD V+T E V + NE +A + L+ E LD P
Sbjct: 349 MPCSAKKFEAAREEFKND--GVPDVDYVVTTQEF-VNMVNESGIAFSELEPEA---LDRP 402
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV-----VEFKPLRNPD-IREAT 354
+ + ++ G V IR++ E PV F+ +R + ++E T
Sbjct: 403 FQSCSGAGVIF-------GVTGGVTEAVIRKVL-SEQPVPALRSFAFEGVRGMEGVKETT 454
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
D ++ I +G +N N+I+K++ YDF+E+MACP GC+NG Q +
Sbjct: 455 INALDREIKIAIVSGLKNADNIIKKVRAGEAHYDFVEVMACPGGCINGAGQPFAKAEEKV 514
Query: 415 KETALELETILCDLAKSEPR--ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
K A + D KS R +N ++ LY L DK +L+ Y
Sbjct: 515 KRGA---QLYKVDKMKSISRSDDNPLMDSLYSGIL----KDKTHELLHVHY 558
>gi|320354002|ref|YP_004195341.1| hydrogenase, Fe-only [Desulfobulbus propionicus DSM 2032]
gi|320122504|gb|ADW18050.1| hydrogenase, Fe-only [Desulfobulbus propionicus DSM 2032]
Length = 533
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 205/443 (46%), Gaps = 68/443 (15%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + I+++ E V+KVI + N H +++ A +++G
Sbjct: 112 CVNCGQCALWCPTGAISERDDIERVLKVISDKNLH----------VIVQTAPATRIAIGE 161
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG------- 182
+F + +V K+ K LG D V D + +++E E ++R + GG
Sbjct: 162 EFGMPAGSIVEGKMVAALKLLGFDRVFDTNFSADLTIMEEGTELVNRIKAAGGHGEGGHG 221
Query: 183 ------PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
P FTS PGWV + E + + +L ++S KSPQQ++GS+ KT+ A+K G+ P
Sbjct: 222 HAPTALPQFTSCSPGWVKFCEYFYPD-LLDHMSTCKSPQQMLGSVAKTYYAKKKGIDPKQ 280
Query: 237 IYHVTLMPCYDKKLEASRADFYNEEL-----GYRDVDCVITAVELEVLLANELATTTLQE 291
I V++MPC KK EA+R + + + RDVD V+T EL ++
Sbjct: 281 IVSVSIMPCTAKKFEAARGEMNSAGIMAGTPELRDVDFVLTTRELARMI----------- 329
Query: 292 EKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESP---VVEF 342
K +D + P+ L+ GTG+ V+ AIR L GE+P ++
Sbjct: 330 -KGKGIDLAKLDPQPYDSLMGEGTGAAVIFAATGGVMEAAIRSGYYLLTGENPPEALLNL 388
Query: 343 KPLRN-PDIREATFTCGDV-TLRFCIANGFRNIQNLIQKLKRK----RLP-YDFIEIMAC 395
+R ++EA+ V LR +A+G N + L+ +++ R P Y FIE MAC
Sbjct: 389 AAVRGLQGVKEASLEVPGVGELRVAVASGLANGRQLLDQIRADKQAGRPPRYHFIEFMAC 448
Query: 396 PSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR----ENATLEHLYKAWLGGKS 451
P GC++GG Q + S L++I AK + EN + LY +LG +
Sbjct: 449 PGGCISGGGQPKTSVPPSDWVRQERLKSIYTIDAKIYKKRLSHENKEVMDLYADYLGKPN 508
Query: 452 TDKGKHMLNTSY-----HNIPKN 469
+ +L+T+Y H PKN
Sbjct: 509 GEMAHKLLHTTYTDRSAHLTPKN 531
>gi|452204429|ref|YP_007484558.1| [FeFe] hydrogenase catalytic subunit [Dehalococcoides mccartyi
BTF08]
gi|452111485|gb|AGG07216.1| [FeFe] hydrogenase catalytic subunit [Dehalococcoides mccartyi
BTF08]
Length = 573
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 188/373 (50%), Gaps = 29/373 (7%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFS 165
A+ + K +V+ A +SLG + L +VAK + +RLG D V D +
Sbjct: 216 AAIADPAKHVVVQEAPSIRVSLGEELGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLT 275
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E +E ++R GG P TS CPGWV + E + E + P +S KSPQQ+ G++ KT
Sbjct: 276 ILEEGSELVERVKEGGVLPQITSCCPGWVKFMEHYYPE-LAPNVSSAKSPQQMFGAVCKT 334
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEK G+ P I +V++MPC KK E R + + G++DVD V+T EL ++
Sbjct: 335 YYAEKAGIDPKTIVNVSVMPCTAKKFECQRPEMNDS--GFKDVDYVLTTRELARMI---- 388
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPG-ES 337
K+ LD+ + P LL TG+ G V+ AIR L G E
Sbjct: 389 --------KEAGLDFVSLDEEPAEDLLGLYTGAATIFGATGGVMEAAIRSAYMLITGREL 440
Query: 338 PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
++ +P+R + ++ AT + L+ +A+G N + L++++K PY FIEIMACP
Sbjct: 441 ENLDIEPVRGLEGVKTATLNVDGLELKVAVAHGLGNARALLEEIKEGTSPYHFIEIMACP 500
Query: 397 SGCLNGGAQ-IR-NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDK 454
GC+ GG Q IR + + + AL E ++ K N ++E +Y +L +
Sbjct: 501 GGCVGGGGQPIRFDSSLKKKRGEALYEEDR--NMPKRCSHHNPSVEKIYADYLEKPLGKR 558
Query: 455 GKHMLNTSYHNIP 467
+L+T Y + P
Sbjct: 559 SHKLLHTEYTSRP 571
>gi|452203011|ref|YP_007483144.1| [FeFe] hydrogenase catalytic subunit [Dehalococcoides mccartyi
DCMB5]
gi|452110070|gb|AGG05802.1| [FeFe] hydrogenase catalytic subunit [Dehalococcoides mccartyi
DCMB5]
Length = 573
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 188/373 (50%), Gaps = 29/373 (7%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFS 165
A+ + K +V+ A +SLG + L +VAK + +RLG D V D +
Sbjct: 216 AAIADPAKHVVVQEAPSIRVSLGEELGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLT 275
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E +E ++R GG P TS CPGWV + E + E + P +S KSPQQ+ G++ KT
Sbjct: 276 ILEEGSELVERVKEGGVLPQITSCCPGWVKFMEHYYPE-LAPNVSSAKSPQQMFGAVCKT 334
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEK G+ P I +V++MPC KK E R + + G++DVD V+T EL ++
Sbjct: 335 YYAEKAGIDPKTIVNVSVMPCTAKKFECQRPEMNDS--GFKDVDYVLTTRELARMI---- 388
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPG-ES 337
K+ LD+ + P LL TG+ G V+ AIR L G E
Sbjct: 389 --------KEAGLDFVSLDEEPAEDLLGLYTGAATIFGATGGVMEAAIRSAYMLITGREL 440
Query: 338 PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
++ +P+R + ++ AT + L+ +A+G N + L++++K PY FIEIMACP
Sbjct: 441 ENLDIEPVRGLEGVKTATLNVDGLELKVAVAHGLGNARALLEEIKEGTSPYHFIEIMACP 500
Query: 397 SGCLNGGAQ-IR-NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDK 454
GC+ GG Q IR + + + AL E ++ K N ++E +Y +L +
Sbjct: 501 GGCVGGGGQPIRFDSSLKKKRGEALYEEDR--NMPKRCSHHNPSVEKIYADYLEKPLGKR 558
Query: 455 GKHMLNTSYHNIP 467
+L+T Y + P
Sbjct: 559 SHKLLHTEYTSRP 571
>gi|293376714|ref|ZP_06622937.1| putative ferredoxin hydrogenase [Turicibacter sanguinis PC909]
gi|325845179|ref|ZP_08168487.1| ferredoxin hydrogenase [Turicibacter sp. HGF1]
gi|292644671|gb|EFF62758.1| putative ferredoxin hydrogenase [Turicibacter sanguinis PC909]
gi|325488775|gb|EGC91176.1| ferredoxin hydrogenase [Turicibacter sp. HGF1]
Length = 590
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 188/406 (46%), Gaps = 34/406 (8%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C CI + + + Q H + +V+ + N+ K +V +A +LG +
Sbjct: 191 CIHCGQCIAACPTAAL--QEHSNINQVVE-------AINDPNKMVVFQVAPAVRAALGEE 241
Query: 132 FALS-HEQVVAKLCGFFKRLG--VDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F L V K+ +R+G V D + +++E E ++R GG P+ TS
Sbjct: 242 FNLPIGTCVTGKIAAALRRIGGPSSKVFDTNFSADLTIMEEAYELVNRIQQGGVLPMITS 301
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
PGW+ AE+ + +LP++S KSPQQ+ G+++K++ AEK + S IY V++MPC
Sbjct: 302 CSPGWIRLAEQYMPD-VLPHLSTCKSPQQMFGAILKSYWAEKNNIDKSSIYCVSVMPCVA 360
Query: 248 KKLEASRADFYNEEL---GYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
KK E R EEL G DVD IT EL ++ + D D P E+
Sbjct: 361 KKTELKR-----EELAVNGIADVDASITTRELARMI--RMYGLDFNALPDETFDQPLGEY 413
Query: 305 NPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLR 363
+ + +GG L A L +E++ +R + ++EAT T GD+TL
Sbjct: 414 SGAGTIF---GATGGVMEAALRTAADVLSGQSLEQIEYEAVRGVEGVKEATLTVGDLTLN 470
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNEKVASPKET 417
+ +G + + +L PY FIE+M C GC+ GG Q + N+ + +E
Sbjct: 471 VAVIHGGKQALETVNQLLTSDKPYHFIEVMGCSGGCVAGGGQPHIPAHLFNKGLDIREER 530
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
A L + EN ++++Y +LG ++ +L+T Y
Sbjct: 531 AKALYEDDKAQVIRKSHENPVIQNVYAEYLGTPNSHLAHELLHTHY 576
>gi|150391798|ref|YP_001321847.1| hydrogenase, Fe-only [Alkaliphilus metalliredigens QYMF]
gi|149951660|gb|ABR50188.1| hydrogenase, Fe-only [Alkaliphilus metalliredigens QYMF]
Length = 551
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 158/340 (46%), Gaps = 22/340 (6%)
Query: 70 TDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C+ C CI S + L ++ E V I + H +V+ A +L
Sbjct: 189 TPCIYCGQCIVSCPVAALREKEDIERVWDAIEDPEIH----------VVVQTAPAVRAAL 238
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F L +V K+ KRLG D V D +++E +E L R + G P+ T
Sbjct: 239 GEEFGLPIGSRVTGKMVASLKRLGFDQVFDTNFGADLTIMEEGHELLHRLQNNGKLPMIT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV Y E ++ EFI +S KSP Q++G++IK++ AEK + P I+ V++MPC
Sbjct: 299 SCSPGWVRYCEFNYPEFI-ENLSTCKSPHQMLGAIIKSYYAEKQQIDPKKIFVVSIMPCT 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA+R + + G RDVD V+T EL ++ A + +D D E+
Sbjct: 358 SKKSEAARPEMTVD--GLRDVDAVLTTRELAKMIKQ--ARIEFLKLEDAEFDPALGEYTG 413
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFC 365
+ +GG L L E +E+ +R I+EA G T++
Sbjct: 414 AGAIF---GATGGVMEAALRTLADTLTGQELEEIEYHNIRGVAGIKEAEINLGGQTIKIA 470
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
+ +G L++ +K Y FIEIM C GC+ GG Q
Sbjct: 471 VVHGTAMASKLLEMIKSGEKEYHFIEIMGCSGGCVTGGGQ 510
>gi|333924169|ref|YP_004497749.1| hydrogenase, Fe-only [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333749730|gb|AEF94837.1| hydrogenase, Fe-only [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 554
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 205/436 (47%), Gaps = 39/436 (8%)
Query: 45 IQDDGAYIQETNGREEKLKKV---EISLTDCLACSGCITSAESVLITQQSH-EEVMKVIR 100
+Q G Y+ G E + ++ C+AC C+ + + +T++S+ EEV + +
Sbjct: 110 MQGIGVYVPLNRGYETIIAPAFERNLAEVACIACGQCLLACPTASLTERSYIEEVWQAL- 168
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVA-KLCGFFKRLGVDLVLDVG 159
++ K +V+ A +S+G +F L VV+ KL +RLG D V
Sbjct: 169 ---------DDPAKHVVVQTAPAIQVSIGEEFGLPAGTVVSGKLAASLRRLGFDSVFSTD 219
Query: 160 IAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVM 218
A +++E +E L R GG PL +S PGW+ + E + EFI +S KSP ++
Sbjct: 220 FAADLTIMEEAHELLHRLAKGGPLPLISSCSPGWIKFCEHFYPEFI-DNLSTCKSPMEMF 278
Query: 219 GSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEV 278
G+L KT+ A+K G+ P + V +MPC KK EA+R + G RDVD V+T EL
Sbjct: 279 GALAKTYYAQKAGIDPKDMVVVAVMPCTAKKFEAARPEMTT--YGLRDVDYVLTTRELAK 336
Query: 279 LLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP 338
+L A L + + D P + + +GG + A+ E
Sbjct: 337 MLRQ--ADINLNKLPEEDFDQPLGLSSGAANIFAT---TGGVMEAAIRTALALTEGKELG 391
Query: 339 VVEFKPLR-NPDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPS 397
+EFK R I+EA TLR +A+G N + L+++LKR + FIEIMAC
Sbjct: 392 RLEFKEFRGTTGIKEAEVELKGQTLRLAVAHGTNNAKKLMERLKRGE-KFHFIEIMACAG 450
Query: 398 GCLNGGAQIRNEKVASPKETALELE--------TILCDLAKSEPR--ENATLEHLYKAWL 447
GC+ GG Q P++ L LE DL+K R EN + +Y+ +L
Sbjct: 451 GCVGGGGQ---PITGDPEKPELTLEHRQKRAAGLYALDLSKELRRSHENKAVLQVYQEFL 507
Query: 448 GGKSTDKGKHMLNTSY 463
G + K K +L+T Y
Sbjct: 508 GEPMSKKAKEILHTHY 523
>gi|336426578|ref|ZP_08606587.1| hypothetical protein HMPREF0994_02593 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010594|gb|EGN40576.1| hypothetical protein HMPREF0994_02593 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 568
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 197/415 (47%), Gaps = 51/415 (12%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I +DC C CIT + + ++ ++ K+ R A ++ T T+V + P +
Sbjct: 183 IEESDCSICGQCITHCPTGALRER--DDTSKIFR------ALADSETITVV---QVAPAV 231
Query: 127 SLGAKFALSHEQVVA---KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS---G 180
AL +A ++ K++G D V D + +++E NE L R
Sbjct: 232 RAAWGEALDMPAYMATEGRMVAALKKIGFDYVFDTNFSADLTIMEEGNELLARLADPEEK 291
Query: 181 GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+FTS CP WV + + + E + ++S KSPQQ+ G++ K++ AEK GV P I +
Sbjct: 292 RWPMFTSCCPAWVRFMKSQYPE-MADHLSTAKSPQQMFGAITKSYFAEKTGVDPKKICSI 350
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDW 299
++MPC KK+EA D Y+ G DVD V+T E L+ A +A L EE D
Sbjct: 351 SIMPCVSKKMEAVLPDMYSAGAG-ADVDIVLTTREFARLVRAEHIAPALLTEEA---FDS 406
Query: 300 PWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPDIR- 351
P E TG+G G V+ A+R G +P + F +R + R
Sbjct: 407 PLGE----------STGAGVIFGVTGGVMEAALRTAYYCVEGVNPPPDTFSDVRGFEGRK 456
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-----I 406
EA+FT G LR C +G +N ++L++ ++ + YDF+E+MACP GC+ GG Q +
Sbjct: 457 EASFTLGGKKLRTCTVSGLKNARDLMEDIRSGAVHYDFVEVMACPGGCVGGGGQPILDGV 516
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
V PK L+ + L +N + LY+ +L +K H+L+T
Sbjct: 517 EMADVRGPKLYKLDSQRPL-----RFSHDNPEIIKLYEEYLEKPLGEKSHHLLHT 566
>gi|242277840|ref|YP_002989969.1| hydrogenase, Fe-only [Desulfovibrio salexigens DSM 2638]
gi|242120734|gb|ACS78430.1| hydrogenase, Fe-only [Desulfovibrio salexigens DSM 2638]
Length = 461
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 161/339 (47%), Gaps = 36/339 (10%)
Query: 142 KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSH 200
+L +RLG D V D A +++E +E LDR SGG P+FTS CPGWV Y E +
Sbjct: 135 QLAASLRRLGFDAVYDTIFAADVTIMEESSELLDRIKSGGTMPMFTSCCPGWVRYMETAW 194
Query: 201 GEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE 260
+ + ++S KSPQQ+ G+L KT+ AE GV I V +MPC KK EA+R + +
Sbjct: 195 PD-LTDHLSSCKSPQQMAGALFKTYGAEIAGVGAESIASVAVMPCTAKKHEAARPEMQSS 253
Query: 261 ELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG---- 316
G +DVD V+T EL +L + E+D D P M L +G G
Sbjct: 254 --GQQDVDAVLTVTELAAMLKAKGINLAEMPEED--FDVP--------MGLYSGAGVIFG 301
Query: 317 -SGGYAHNVLSHAI-----RQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRFCIANGF 370
+GG L AI + +C ES VV F P IR A T+R I +G
Sbjct: 302 ATGGVMEAALRTAIAVTSGKDVC--ESGVV-FSPA-GEGIRRAAIDVAGKTVRAVIVSGL 357
Query: 371 RNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNEKVASPKETALELETI 424
N L++ ++ + +DF+E+M C GC+ GG Q I ++V + + L
Sbjct: 358 ANAAPLLEDIRAGKADFDFMEVMCCHGGCVAGGGQPKLLPGIDRDEVIAKRRGGLHRHDK 417
Query: 425 LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L +N + LY +LG + +L+T Y
Sbjct: 418 --ELPVRASHKNEAVTALYDKYLGEPLGHRSHELLHTHY 454
>gi|325290294|ref|YP_004266475.1| hydrogenase, Fe-only [Syntrophobotulus glycolicus DSM 8271]
gi|324965695|gb|ADY56474.1| hydrogenase, Fe-only [Syntrophobotulus glycolicus DSM 8271]
Length = 521
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 218/491 (44%), Gaps = 57/491 (11%)
Query: 25 CIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGR---EEKLKKVEISLTDCLACSGCITS 81
C KP+ EK +G + + G + + GR + K + C+ C CI
Sbjct: 35 CGKPLTPEKAAGGDGWLPTQYDNRGDFPTQVKGRISIDPKNPSITRDDQKCILCGQCIEV 94
Query: 82 AESVLITQQSHEEVMK-------------------VIRENNAHKA--SSNENTKTIVLSL 120
++V ++ +K + ++ K + + K ++
Sbjct: 95 CQNVQTVYGYYKLPIKNETICVNCGQCTHWCPTAAITEVDDTQKVWEALADPDKIVIAQT 154
Query: 121 AIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS 179
A +++G + V K+ + +G D V D A +++E +E + R
Sbjct: 155 APAIRVAIGDDYGFPIGTNVEGKMVAALREIGFDYVADTNWAADLTIMEEASEHVHRLKD 214
Query: 180 GGGP--LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P +FT+ CP WV + E + E I P S KSPQ +MG++IKT+ AEK G+ PS I
Sbjct: 215 PTAPYTMFTTCCPAWVKFMEYYYPEMI-PKYSTSKSPQAMMGAMIKTYFAEKKGIDPSKI 273
Query: 238 YHVTLMPCYDKKLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEE 292
V +MPC KK E +R + Y+ + G RD+D V+T E +L ++ L +
Sbjct: 274 VSVAVMPCAAKKYECTREELNSAAKYHNKPGMRDIDVVLTTREFSEML--KMKKIDLAKL 331
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQ---LCPGESP---VVEFKPLR 346
+D D E + + N SGG V+ A+R L GE P V++ +P+
Sbjct: 332 QDSDFDNLVGEASGAGYIFAN---SGG----VIEAAVRTAYFLATGEQPPAVVLDLQPVH 384
Query: 347 N-PDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
I+EAT G + +A G N + + + + P+ +E+MACP GC++GG
Sbjct: 385 GLQGIKEATLEIPGIGEEKIAVAQGLNNARKICDMINAGQAPWRLVEVMACPGGCISGGG 444
Query: 405 QIRNEKVASPKETALELETILCDLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLN 460
Q R+ + +E + + KS EN ++ +Y +LG +++ + +L+
Sbjct: 445 QPRSSVPPQDRVREKRIEAVY-KIDKSMRIRLSHENPEIKKIYTEFLGQPLSEEAELLLH 503
Query: 461 TSYHNIPKNNI 471
T H +PK+++
Sbjct: 504 T--HYVPKDHL 512
>gi|188588530|ref|YP_001921030.1| iron hydrogenase 1 [Clostridium botulinum E3 str. Alaska E43]
gi|188498811|gb|ACD51947.1| iron hydrogenase 1 [Clostridium botulinum E3 str. Alaska E43]
Length = 582
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 208/414 (50%), Gaps = 40/414 (9%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I +DC C CIT + + ++ + + A SN++ K VL +A
Sbjct: 182 KIQDSDCSLCGQCITHCPTGALRERDNTQ--------KAFDVLSNKD-KITVLQIAPAVR 232
Query: 126 LSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
S G L+ E+ V +L +++G D + D A +++E +EFL+R + P
Sbjct: 233 ASWGESLGLTKEKATVKRLVSALRKIGFDYIFDTNFAADLTIMEEGSEFLERLQNNTNLP 292
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV + + + + + +S KSPQQ+ G++ K++ A+ L V PS IY +++M
Sbjct: 293 MFTSCCPAWVRFLKSQYPD-MTKMLSTAKSPQQMFGAIAKSYYAKLLNVDPSKIYCISIM 351
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA + G +D+D +T E+E ++ +E E D D P
Sbjct: 352 PCIAKKHEAEIPIMNDAGYG-QDIDLCLTTREVERMIRSEHIIANDLNESD--FDTP--- 405
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREATF 355
L G+G+G G V+ A+R L G +P FK +R + I+EA+F
Sbjct: 406 -------LGIGSGAGVIFGSTGGVMEAALRTAYFLTCGNNPDPNAFKEIRGMNGIKEASF 458
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-IRN--EKVA 412
+ L+ + +G N +NLI+ L++ + YDFIE+MACP GC GG Q I++ E
Sbjct: 459 EINNTKLKVAVVSGLNNARNLIKNLRKGNVYYDFIEVMACPGGCSGGGGQPIKDGIELAE 518
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
+ + EL+ L D+ S EN ++ ++YK +L ++ +L+T HN+
Sbjct: 519 TRSKMLYELDE-LSDIRFSH--ENPSILNVYKEFLEKPLSNVSHKLLHTD-HNL 568
>gi|225410187|ref|ZP_03761376.1| hypothetical protein CLOSTASPAR_05409 [Clostridium asparagiforme
DSM 15981]
gi|225042291|gb|EEG52537.1| hypothetical protein CLOSTASPAR_05409 [Clostridium asparagiforme
DSM 15981]
Length = 683
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 185/372 (49%), Gaps = 33/372 (8%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
K +++S + +LG +F + V K+ + LG D VLD A +++E +E
Sbjct: 99 KIVIMSTSPSVRAALGEEFGMGSAFVQGKMVSLLRALGADYVLDTNFAADLTILEEASEL 158
Query: 174 LDRFLSGGGPL--FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
++R G PL FTS CP WV +AE + + +L +IS KSP + G IKT+ A+K+G
Sbjct: 159 IERVTKGNKPLPQFTSCCPAWVKFAEIYYPD-MLDHISSAKSPIGMQGPTIKTYFAKKMG 217
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADF--YNEELG---YRDVDCVITAVELEVLLANELAT 286
+ P I +V + PC KK E R + + LG RD+D VIT EL
Sbjct: 218 IDPRTIVNVAVTPCTAKKYEIRREEMSAAGKYLGIEDMRDMDYVITTREL---------- 267
Query: 287 TTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGE-SPV 339
Q ++ +D+ E + L+ G+G+G G V+ A+R + GE +P
Sbjct: 268 --AQWAREAEVDFEALEDGTYDRLMGEGSGAGVIFGNTGGVMEAALRTAYEYITGEKAPQ 325
Query: 340 V--EFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
V + +P+R + ++EA+ G +T+ + G N+++ I+++K Y F+E+M CP
Sbjct: 326 VLYQLEPVRGLEAVKEASLQVGGLTVNVAVIFGTANVRSFIRRMKEGGKQYHFVEVMTCP 385
Query: 397 SGCLNGGAQIRNEKVASPKETALELETILC---DLAKSEPRENATLEHLYKAWLGGKSTD 453
GC+ GG Q ++++ A +E++ + EN ++ LY + G ++
Sbjct: 386 GGCIGGGGQPKDKEFEGDALRARRIESLYGRDRSMTVRASHENEEIKELYHEFYGQPLSE 445
Query: 454 KGKHMLNTSYHN 465
+ ML+T Y +
Sbjct: 446 LAEQMLHTGYED 457
>gi|421056163|ref|ZP_15519090.1| hydrogenase, Fe-only [Pelosinus fermentans B4]
gi|421061387|ref|ZP_15523721.1| hydrogenase, Fe-only [Pelosinus fermentans B3]
gi|421067292|ref|ZP_15528788.1| hydrogenase, Fe-only [Pelosinus fermentans A12]
gi|421072858|ref|ZP_15533962.1| hydrogenase, Fe-only [Pelosinus fermentans A11]
gi|392438579|gb|EIW16402.1| hydrogenase, Fe-only [Pelosinus fermentans B4]
gi|392445285|gb|EIW22617.1| hydrogenase, Fe-only [Pelosinus fermentans A11]
gi|392449921|gb|EIW26996.1| hydrogenase, Fe-only [Pelosinus fermentans B3]
gi|392450021|gb|EIW27079.1| hydrogenase, Fe-only [Pelosinus fermentans A12]
Length = 459
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 172/357 (48%), Gaps = 39/357 (10%)
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+SL +F + +V K+ KRLG V D A +++E +E + R GG P
Sbjct: 119 VSLAEEFGMPLGSLVPGKMVAALKRLGFTRVYDTNFAADLTIMEEGSELVKRITEGGSLP 178
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV + E + E I ++S KSPQQ+ GS+ KT+ A GV +Y V +M
Sbjct: 179 MFTSCCPAWVKFVENEYPELI-DHLSSCKSPQQMAGSMFKTYGASVDGVDAREVYSVAIM 237
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWD 302
PC KK EA+R + + GY+DVD V+T EL L+ + L EE D P
Sbjct: 238 PCTCKKFEANRPEMKSS--GYQDVDAVLTTRELAYLIKEAAIDFNALPEES---FDKPLG 292
Query: 303 EHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI---------RE 352
+ +G G+ G V+ AIR ++ +P+ N ++ R+
Sbjct: 293 --------MYSGAGTIFGVTGGVMEAAIRTA----YELITKEPIENVNVTSVRGEQGVRK 340
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------I 406
T G + L+ + +G +N+ +++ ++R + + F+E+M CP+GC++GG Q +
Sbjct: 341 VTLDTGALKLKTVVVSGLKNVIPILEDIQRGKADFHFMEVMTCPAGCISGGGQPKMLLPV 400
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
K ++++ KS EN ++ +Y+ +LG K +L+T Y
Sbjct: 401 DGRKAYENRKSSTYQHDEEQRYRKS--HENPEIQDIYQKFLGEPLGHKSHKLLHTHY 455
>gi|392961982|ref|ZP_10327429.1| hydrogenase, Fe-only [Pelosinus fermentans DSM 17108]
gi|392452740|gb|EIW29645.1| hydrogenase, Fe-only [Pelosinus fermentans DSM 17108]
Length = 460
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 172/357 (48%), Gaps = 39/357 (10%)
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+SL +F + +V K+ KRLG V D A +++E +E + R GG P
Sbjct: 120 VSLAEEFGMPLGSLVPGKMVAALKRLGFTRVYDTNFAADLTIMEEGSELVKRITEGGSLP 179
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV + E + E I ++S KSPQQ+ GS+ KT+ A GV +Y V +M
Sbjct: 180 MFTSCCPAWVKFVENEYPELI-DHLSSCKSPQQMAGSMFKTYGASVDGVDAREVYSVAIM 238
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWD 302
PC KK EA+R + + GY+DVD V+T EL L+ + L EE D P
Sbjct: 239 PCTCKKFEANRPEMKSS--GYQDVDAVLTTRELAYLIKEAAIDFNALPEES---FDKPLG 293
Query: 303 EHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI---------RE 352
+ +G G+ G V+ AIR ++ +P+ N ++ R+
Sbjct: 294 --------MYSGAGTIFGVTGGVMEAAIRTA----YELITKEPIENVNVTSVRGEQGVRK 341
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------I 406
T G + L+ + +G +N+ +++ ++R + + F+E+M CP+GC++GG Q +
Sbjct: 342 VTLDTGALKLKTVVVSGLKNVIPILEDIQRGKADFHFMEVMTCPAGCISGGGQPKMLLPV 401
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
K ++++ KS EN ++ +Y+ +LG K +L+T Y
Sbjct: 402 DGRKAYENRKSSTYQHDEEQRYRKS--HENPEIQDIYQKFLGEPLGHKSHKLLHTHY 456
>gi|402574701|ref|YP_006624044.1| hydrogenase, Fe-only [Desulfosporosinus meridiei DSM 13257]
gi|402255898|gb|AFQ46173.1| hydrogenase, Fe-only [Desulfosporosinus meridiei DSM 13257]
Length = 580
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/406 (30%), Positives = 188/406 (46%), Gaps = 26/406 (6%)
Query: 70 TDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C C C+ + L+ ++V K + N+ T+ +++ A ++L
Sbjct: 193 TSCTFCGQCVAVCPTGALMELDQVDKVWKAL----------NDPTRYVIVETAPAVRVAL 242
Query: 129 GAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F L +V ++ +RLG D V D +++E E + R GG P+ T
Sbjct: 243 GEGFGLEPGTIVTGRMVAALRRLGFDRVFDTEFGADVTIMEEATELIHRIEHGGRLPILT 302
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV + E + +L S KSP Q++G L K++ AE G+ P I V++MPC
Sbjct: 303 SCCPAWVKFFEHQFPD-LLDIPSTCKSPHQMLGVLSKSYYAETYGIDPQKITVVSIMPCI 361
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA+R + + + DVD VIT EL ++ A K+ D P E
Sbjct: 362 AKKYEAARPELGQDPV-TPDVDIVITTRELSRMIRE--AGIHFDHLKEEDFDHPLGEST- 417
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
+V GT +GG L A L VEF+PLR D I+EA G+ R
Sbjct: 418 -GAAVVFGT-TGGVIEAALRTAYEWLTGKPLENVEFEPLRGMDGIKEAIIPIGERDFRIA 475
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETALELE 422
+ +G N + +++K++ YD IEIMACP GC+ GG Q N + + A+ E
Sbjct: 476 VTHGLGNARTILEKIQSGESHYDAIEIMACPGGCIGGGGQPYHHGNLAILEARANAIYQE 535
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
L KS EN + LY+ ++G +K +L+TS+ PK
Sbjct: 536 DRSKPLRKSH--ENPAVLKLYRDYIGEPYGEKAHRLLHTSFTKRPK 579
>gi|421078124|ref|ZP_15539083.1| hydrogenase, Fe-only [Pelosinus fermentans JBW45]
gi|392523709|gb|EIW46876.1| hydrogenase, Fe-only [Pelosinus fermentans JBW45]
Length = 460
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 173/358 (48%), Gaps = 41/358 (11%)
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+SL +F + +V K+ KRLG V D A +++E +E + R GG P
Sbjct: 120 VSLAEEFGMPLGSLVPGKMVAALKRLGFTRVYDTNFAADLTIMEEGSELVKRITEGGSLP 179
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV + E + E I ++S KSPQQ+ GS+ KT+ A GV +Y V +M
Sbjct: 180 MFTSCCPAWVKFVENEYPELI-DHLSSCKSPQQMAGSMFKTYGASVDGVDAREVYSVAIM 238
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWD 302
PC KK EASR + + GY+DVD V+T EL L+ + L EE D P
Sbjct: 239 PCTCKKFEASRPEMKSS--GYQDVDAVLTTRELAYLIKEAAIDFNALPEES---FDKPLG 293
Query: 303 EHNPHRMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDI---------RE 352
+ +G G+ G V+ AIR ++ +P+ N ++ R+
Sbjct: 294 --------MYSGAGTIFGVTGGVMEAAIRT----AYELITKEPIENVNVTSVRGEQGVRK 341
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
T G + L+ + +G +N+ +++ ++R + + F+E+M CP+GC++GG Q K+
Sbjct: 342 VTLDTGTLKLKTVVVSGLKNVIPILEDIQRGKADFHFMEVMTCPAGCISGGGQ---PKML 398
Query: 413 SPKETAL-----ELETILCDLAK--SEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
P + + + T D + + EN ++ +YK +LG +L+T Y
Sbjct: 399 LPVDGRIAYVNRKFSTYQHDEEQRYRKSHENPEIQDIYKKFLGEPLGHTSHKLLHTHY 456
>gi|333924613|ref|YP_004498193.1| hydrogenase, Fe-only [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333750174|gb|AEF95281.1| hydrogenase, Fe-only [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 516
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 192/417 (46%), Gaps = 48/417 (11%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + IT++ V+ +++ N H +V+ A + LG
Sbjct: 110 CVNCGQCTLWCPTAAITERDDTARVLAALKDKNMH----------VVVQTAPATRVGLGE 159
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLFT 186
+F ++ V K K+LG D V D + ++ E E + R L P FT
Sbjct: 160 EFGMAPGTFVEGKQVAALKKLGFDAVFDTNFSADLTIFEEGTELIRRITGDLKEPLPQFT 219
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV + E + + +LP++S KSPQQ++G+LIKT+ A++ G+ P I+ V++MPC
Sbjct: 220 SCSPGWVKFCEYYYPD-LLPHMSSCKSPQQMLGALIKTYYAKEKGIDPEKIFSVSIMPCT 278
Query: 247 DKKLEASRADFYNE-----ELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R + + + RDVD V+T EL LL ++ + + + D +
Sbjct: 279 AKKFECQRPEMNSAGKHVGKPALRDVDAVLTTRELARLLKSQGI------DINNLPDAKY 332
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVEF---KPLRN-PDIR 351
D L+ +G+G G V+ AIR L + P F P+R +
Sbjct: 333 DS------LMGESSGAGLIFGATGGVMEAAIRSAYFLITKQDPPAAFLNLTPIRGLKGCK 386
Query: 352 EATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
EA V TL+ + +G N + +++ +++K P+ FIE M CP GC++GG Q R
Sbjct: 387 EAAVDIPGVGTLKVAVVHGLSNARPVLEAVRKKEAPWHFIEFMCCPGGCISGGGQPRTSL 446
Query: 411 VASPKETALELETILCDLA----KSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
S + ++ A + + EN + LY+ +L ++ +L+T Y
Sbjct: 447 PPSDTVRQARINSLYNADANIYKERKSYENKEVLALYEKFLENPNSHLAHELLHTEY 503
>gi|422345529|ref|ZP_16426443.1| hydrogenase, Fe-only [Clostridium perfringens WAL-14572]
gi|373228254|gb|EHP50564.1| hydrogenase, Fe-only [Clostridium perfringens WAL-14572]
Length = 696
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 195/420 (46%), Gaps = 45/420 (10%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C + IT EV + NA K +++S + +SLG +
Sbjct: 58 CINCGQCANVCPTSSIT-----EVFDYKKVQNAISYKD----KIVIVSTSPAVRVSLGEE 108
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTSE 188
F +++ V K+ ++LG D VLD A ++VE +E ++R P FTS
Sbjct: 109 FNMNNGSFVQGKMIALLRKLGFDYVLDTNFAADMTIVEEASELVERITKNNKHLPQFTSC 168
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP WV YAE H E IL +IS KSP + G IKT+ A+K+G+ PS I +V L PC K
Sbjct: 169 CPAWVKYAETFHPE-ILEHISTSKSPIGMQGPTIKTYFAKKMGIDPSKIVNVALTPCTAK 227
Query: 249 KLEASRAD------FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
K E R + +Y E RD+D VIT E+ + K+ +D+
Sbjct: 228 KFEIKREEMNASGRYYGIE-DMRDMDYVITTREVAIWA------------KEKGIDFNSL 274
Query: 303 EHNPHRMLLVNGTGSGGYAHN---VLSHAIR---QLCPGESPVVEFKPLRN----PDIRE 352
E + L+ +G+G N V+ A+R + E P +F L + +RE
Sbjct: 275 EDSNFDKLMGEASGAGVIFANTGGVMEAALRTAYKYITKEDPPKDFYDLESVRGMEGVRE 334
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
A+F D+ + + G N I K+K + Y FIE+M CP GC+ GG Q +++K
Sbjct: 335 ASFKINDLEINIAVIYGTENASKFISKMKNEDKKYHFIEVMTCPGGCIGGGGQPKDKKFE 394
Query: 413 SPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
K ++ + + + R EN ++ LY+ + ++ + ML+T+Y + K+
Sbjct: 395 GDKLREKRIDGLYKRDSSMKLRVSYENEEIKKLYEEFYEKPLSNLAEEMLHTNYFDRSKD 454
>gi|258513528|ref|YP_003189750.1| hydrogenase, Fe-only [Desulfotomaculum acetoxidans DSM 771]
gi|257777233|gb|ACV61127.1| hydrogenase, Fe-only [Desulfotomaculum acetoxidans DSM 771]
Length = 573
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 203/414 (49%), Gaps = 49/414 (11%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
SL+D C+ C C + I +++ +EV + + H +V+ A
Sbjct: 185 SLSDSTCVNCGQCALVCPTAAIVEKNQVQEVWSALADPAKH----------VVVQTAPAT 234
Query: 125 VLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+S+G F L +V K+ +RLG D V D +++E +E + R L+G G
Sbjct: 235 RISVGEIFGLEPGSLVTGKMVAALRRLGFDKVFDTDFTADLTIMEEGSELIRR-LNGKGA 293
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
PL TS PGW+ + E H +LP++S KSPQQ+ G+L KT+ AEK G+ P I+ V+
Sbjct: 294 LPLITSCSPGWIKFIEH-HYPDLLPHLSTCKSPQQMFGALAKTYYAEKAGLDPGSIFVVS 352
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA R + + GY+DVD V+T EL +L K+ +D+
Sbjct: 353 IMPCTAKKYEAGRPEMNSS--GYQDVDVVLTTRELGKML------------KEAGIDFTA 398
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREA 353
+ L TG+G G V+ A+R +L GE+ +EFK +R + ++EA
Sbjct: 399 LPEENYDQPLGISTGAGVIFGATGGVMEAALRTGYELVTGETLASIEFKDVRGMEGVKEA 458
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVAS 413
L +A+G N + L++K++ + Y FIEIM CP GC+ GG Q + +
Sbjct: 459 AIDLKGTILNVAVAHGLGNARELLEKIRNGDI-YHFIEIMCCPGGCIGGGGQ----PIPT 513
Query: 414 PKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ET L+ + +S P EN ++ LYK +LG K +L+T Y
Sbjct: 514 DQETRLKRAAGIYSTDQSMPLRKSHENPAVQSLYKEFLGEPLGHKSHQLLHTVY 567
>gi|323701562|ref|ZP_08113235.1| hydrogenase, Fe-only [Desulfotomaculum nigrificans DSM 574]
gi|323533571|gb|EGB23437.1| hydrogenase, Fe-only [Desulfotomaculum nigrificans DSM 574]
Length = 529
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 192/417 (46%), Gaps = 48/417 (11%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + IT++ V+ +++ N H +V+ A + LG
Sbjct: 123 CVNCGQCTLWCPTAAITERDDTARVLAALKDKNMH----------VVVQTAPATRVGLGE 172
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLFT 186
+F ++ V K K+LG D V D + ++ E E + R L P FT
Sbjct: 173 EFGMAPGTFVEGKQVAALKKLGFDAVFDTNFSADLTIFEEGTELIRRITGDLKEPLPQFT 232
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGWV + E + + +LP++S KSPQQ++G+LIKT+ A++ G+ P I+ V++MPC
Sbjct: 233 SCSPGWVKFCEYYYPD-LLPHMSSCKSPQQMLGALIKTYYAKEKGIDPEKIFSVSIMPCT 291
Query: 247 DKKLEASRADFYNE-----ELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R + + + RDVD V+T EL LL ++ + + + D +
Sbjct: 292 AKKFECQRPEMNSAGKHVGKPALRDVDAVLTTRELARLLKSQGI------DINNLPDAKY 345
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVEF---KPLRN-PDIR 351
D L+ +G+G G V+ AIR L + P F P+R +
Sbjct: 346 DS------LMGESSGAGLIFGATGGVMEAAIRSAYFLITKQDPPAAFLNLTPIRGLKGCK 399
Query: 352 EATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEK 410
EA V TL+ + +G N + +++ +++K P+ FIE M CP GC++GG Q R
Sbjct: 400 EAAVDIPGVGTLKVAVVHGLSNARPVLEAVRKKEAPWHFIEFMCCPGGCISGGGQPRTSL 459
Query: 411 VASPKETALELETILCDLA----KSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
S + ++ A + + EN + LY+ +L ++ +L+T Y
Sbjct: 460 PPSDTVRQARINSLYNADANIYKERKSYENKEVLALYEKFLENPNSHLAHELLHTEY 516
>gi|410099619|ref|ZP_11294588.1| hydrogenase, Fe-only [Parabacteroides goldsteinii CL02T12C30]
gi|409217986|gb|EKN10959.1| hydrogenase, Fe-only [Parabacteroides goldsteinii CL02T12C30]
Length = 596
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/364 (33%), Positives = 172/364 (47%), Gaps = 22/364 (6%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENE 172
K ++ A +LG F +V K+ ++LG D V D A +++E E
Sbjct: 228 KIVIAQTAPAVRTALGRDFGCEPGTLVTGKMVSALRQLGFDYVFDTDFAADLTIMEEGTE 287
Query: 173 FLDR---FLSGGG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
L R +LSG P+ TS CPGWV + E+ E + +S KSPQQ+ G++ K++
Sbjct: 288 LLQRLSKYLSGDEEVKIPMMTSCCPGWVSFVEQHFPE-LRDNLSTAKSPQQMFGAIAKSY 346
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA 285
AEKLGV I V++MPC KK EASR +F E G DVD I EL L+ A
Sbjct: 347 FAEKLGVDRKDIVVVSIMPCLAKKYEASRPEFAVE--GNPDVDISIYTRELARLI--RYA 402
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPL 345
E D D P E ++ GT +GG A +EFK L
Sbjct: 403 NINFNELPDSDFDHPLGESTGAGVIF--GT-TGGVIEAACRTAYELYTKKPLERIEFKEL 459
Query: 346 RNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
R + IR T V ++ IA+G N + L++++K + PY IEIMACP GC+ GG
Sbjct: 460 RGLEGIRSGTINFDGVPVKIGIAHGLGNARKLVEEVKSGKSPYHVIEIMACPGGCIGGGG 519
Query: 405 QIRNE---KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
Q ++ V + AL E L KS EN ++ LYK +LG K +L+T
Sbjct: 520 QPFHQGRMDVLRKRAAALYSEDESKPLRKSH--ENPYIQQLYKEYLGEPCGPKAHELLHT 577
Query: 462 SYHN 465
Y +
Sbjct: 578 HYFD 581
>gi|158258982|dbj|BAF82035.1| Fe-hydrogenase [Pseudotrichonympha grassii]
Length = 550
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 187/404 (46%), Gaps = 43/404 (10%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAI---Q 123
+++ DC++C C+T + + ++ E+ K++ + K + + + +SLA +
Sbjct: 176 VNVEDCISCGACVTFCPTTAMREK--REIPKLLHAFSVGKIVAIQFAPAVRVSLAELFGK 233
Query: 124 PVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGP 183
PV ++ K+ +++G V D ++ E NEFL R P
Sbjct: 234 PVGTI----------CTGKMISAARKMGFRYVFDTTFGADLTVYEEANEFLTR---EKRP 280
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CPG+V + E+ H + I PY++ KSP + G++IK H A K+ + +I+ V +
Sbjct: 281 MFTSCCPGFVNFIERYHPDLI-PYLTTTKSPMAITGAVIKNHFAMKMCL--KNIFVVFVG 337
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTL--QEEKDGILDWP 300
PC KK E R N DVDC +T E ++ N E+ +L +EE D +
Sbjct: 338 PCTAKKDEICRHQIMN------DVDCALTTREFGEMIENYEIDWDSLNDKEEFDTVAGEG 391
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDV 360
W V SGG A V+ + + V E PL ++E T T
Sbjct: 392 WT---------VEFGASGGVATGVMKYLCAKYNVPYEVVFENVPLMT-GLKETTITIDGK 441
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALE 420
L+F I +G NLI L YDFIE+M+CP GC+NGG Q + K A +
Sbjct: 442 ELKFAICSGISTAANLIDT--ELYLTYDFIEVMSCPLGCVNGGGQPKISKYAQIHNRSKA 499
Query: 421 LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
+ I + K+ +N+ +E++Y +LG +L+TS+
Sbjct: 500 IRNIFKNANKT-VLDNSAMEYVYTDYLGDPGVGLAHKLLHTSFQ 542
>gi|251780559|ref|ZP_04823479.1| iron hydrogenase 1 [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243084874|gb|EES50764.1| iron hydrogenase 1 [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 582
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 205/413 (49%), Gaps = 38/413 (9%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I +DC C CIT + + ++ + + A SN++ K VL +A
Sbjct: 182 KIQDSDCSLCGQCITHCPTGALRERDNTQ--------KAFDVLSNKD-KITVLQIAPAVR 232
Query: 126 LSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
S G L+ E+ V +L +++G D + D A +++E +EFL+R + P
Sbjct: 233 ASWGESLGLTKEKATVKRLVSALRKIGFDYIFDTNFAADLTIMEEGSEFLERLKNNTNLP 292
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV + + + + + +S KSPQQ+ G++ K++ A+ L V PS IY +++M
Sbjct: 293 MFTSCCPAWVRFLKSQYPD-MTKMLSTAKSPQQMFGAIAKSYYAKLLNVDPSKIYCISIM 351
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA + G +D+D +T E+E ++ +E E D D P
Sbjct: 352 PCIAKKHEAEIPIMNDAGYG-QDIDLCLTTREVERMIRSEHIIANDLNESD--FDTP--- 405
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREATF 355
L G+G+G G V+ A+R L G +P FK +R + I+EA+F
Sbjct: 406 -------LGIGSGAGVIFGSTGGVMEAALRTAYFLTCGNNPDPNAFKEIRGMNGIKEASF 458
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
+ L+ + +G N +NLI+ L++ YDFIE+MACP GC GG Q + + +
Sbjct: 459 EINNTKLKVAVVSGLNNARNLIKNLRKGNAYYDFIEVMACPGGCSGGGGQPIKDGIELAE 518
Query: 416 ETALELETI--LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNI 466
+ +L + L D+ S EN ++ ++YK +L ++ +L+T HN+
Sbjct: 519 TRSKKLYELDELSDIRFSH--ENPSILNVYKEFLEKPLSNVSHKLLHTD-HNL 568
>gi|363897322|ref|ZP_09323861.1| hypothetical protein HMPREF9624_00423 [Oribacterium sp. ACB7]
gi|361958819|gb|EHL12116.1| hypothetical protein HMPREF9624_00423 [Oribacterium sp. ACB7]
Length = 578
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 204/406 (50%), Gaps = 40/406 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL--S 127
+ C C CIT + + R++ + ++ +TIVL+ I P + +
Sbjct: 187 SSCALCGQCITHCPVGALRE----------RDDTDKILDALDDPETIVLA-QIAPSIRTA 235
Query: 128 LGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PL 184
G +F LS E+ V +L K +G D V D + +++E +EFL + G P+
Sbjct: 236 WGEEFGLSPEEATVERLSACLKEMGFDYVFDTDFSADLTIMEEASEFLHKLTHNEGQFPM 295
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGWV + + + EFI P +S KSPQQ+ G++ K++ A+ L V P I+ V++MP
Sbjct: 296 FTSCCPGWVRFIKSHYPEFI-PQVSTSKSPQQMFGAIAKSYYADILKVDPKKIFSVSIMP 354
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWPWDE 303
C KK E + + +++ G DVD +T E+ L+ A ++ L D LD P
Sbjct: 355 CLAKKAECAYPNMVDKD-GNFDVDVALTTREVNRLIRALHISPAKLS---DRALDMP--- 407
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IREATF 355
L G+G+G G V+ A+R L GE+P + F+ +R + +E++F
Sbjct: 408 -------LGIGSGAGNIFGATGGVMEAALRTAYYLATGENPDPDAFQEVRGMEGWKESSF 460
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
+ L+ + +G N L+ LK ++ YDF+E+MACP GC+ GG Q +++V
Sbjct: 461 SIAGNKLKIAVVHGLANADRLLNALKNGQVHYDFVEVMACPGGCVGGGGQPIHDQVEMAA 520
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
A L + + EN +++ +YK +LG ++ + +L+T
Sbjct: 521 LRAPVLYKQDREGSIRFSHENPSIKSVYKDYLGEPLSEIAEELLHT 566
>gi|260893623|ref|YP_003239720.1| hydrogenase, Fe-only [Ammonifex degensii KC4]
gi|260865764|gb|ACX52870.1| hydrogenase, Fe-only [Ammonifex degensii KC4]
Length = 578
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 202/417 (48%), Gaps = 49/417 (11%)
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
V ++ T+C+ C C I ++ + + A+ + TK +V+ A
Sbjct: 183 VPLAETNCVQCGQCALVCPVGAIYERD---------DTDKVWAALADPTKHVVVQTAPAV 233
Query: 125 VLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+++G F L K+ +RLG D + D A +++E E L+R GG
Sbjct: 234 HVTIGEMFGLPVGTDATGKIVAALRRLGFDAIFDTNFAADLTIMEEGTELLERIEKGGVL 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P FTS PGW+ + E + E I P+ S KSPQQ++G ++KT+ A+K G+ P ++ V++
Sbjct: 294 PQFTSCSPGWIKFIEHFYPELI-PHFSSCKSPQQMLGPVVKTYYAQKKGIDPKDVFMVSI 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK EA+R + GYRDVD V+T+ EL ++ A D D P+
Sbjct: 353 MPCTAKKFEAARPEMNAS--GYRDVDVVLTSRELGRMIKE--AGIDFANLPDENYDDPFG 408
Query: 303 EHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRN-PDIREAT 354
GTG+G G V+ A+R +L G++ P ++F +R ++EA+
Sbjct: 409 ----------IGTGAGQIFGATGGVMEAALRTAYELATGKTLPKLDFVEVRGMKGVKEAS 458
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGG-------AQI 406
T++ +A+G N + L++KLK L Y FIE+M CP GC+ GG +I
Sbjct: 459 VELNGKTIKVLVAHGLGNARLLMEKLKAGELKDYHFIEVMTCPGGCIGGGGQPIPTTTEI 518
Query: 407 RNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
R +++A E +L + EN ++ LY+ +LG + K +L+T Y
Sbjct: 519 REKRIAGIYERDK-------NLPYRKSHENPAIKKLYEEFLGKPLSHKSHELLHTKY 568
>gi|333980293|ref|YP_004518238.1| hydrogenase, Fe-only [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823774|gb|AEG16437.1| hydrogenase, Fe-only [Desulfotomaculum kuznetsovii DSM 6115]
Length = 574
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 199/406 (49%), Gaps = 31/406 (7%)
Query: 68 SLTD--CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
SL D C C CI I ++ H EEV I + +K +V+ A
Sbjct: 184 SLNDVACALCGQCILVCPVGAIHEKEHIEEVWHAI----------FDPSKFVVVQDAPAV 233
Query: 125 VLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F +V K+ +RLG D V D A +++E +E L R GG
Sbjct: 234 RAALGEEFGYPPGTLVTGKMLAAVRRLGFDRVFDTNFAADLTIIEEGHELLKRIKEGGVL 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+ TS PGWV + E + E +LP++S KSP Q++G+L+KT+ A+K+GV P + V++
Sbjct: 294 PMITSCSPGWVKFIEHFYPE-LLPHLSTCKSPHQMLGALVKTYYAQKVGVDPKDMVVVSV 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK E +R + GY+DVD VIT EL ++ A +DG D P
Sbjct: 353 MPCTAKKFECNRPEMNGS--GYKDVDYVITTRELAKMIKQ--AGIDFASLEDGYYDDPLG 408
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGES-PVVEFKPLRN-PDIREATFTC-GD 359
E++ + G+ G + +L G++ +EF +R DI+EA G
Sbjct: 409 EYSGAGTIF----GATGGVMEAALRTVYELVTGKTLERLEFTAVRGLEDIKEAVVPVEGL 464
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR--NEKVASPKET 417
L+ +A+G N + ++ ++K Y FIEIM CP GC+ GG Q N+++ +
Sbjct: 465 GELKVAVAHGLGNARKILDRIKDGSADYHFIEIMCCPGGCVGGGGQPLPVNDEIRMLRAR 524
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
AL E + KS EN +++ LY+ +LG +K +L+T Y
Sbjct: 525 ALYQEDEKLRIRKSH--ENPSIKKLYEEFLGRPLGEKSHQLLHTRY 568
>gi|374340836|ref|YP_005097572.1| hydrogenase, Fe-only [Marinitoga piezophila KA3]
gi|372102370|gb|AEX86274.1| hydrogenase, Fe-only [Marinitoga piezophila KA3]
Length = 577
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 195/402 (48%), Gaps = 29/402 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C C C+ + + ++S+ ++V VI + TK +V+ A ++L
Sbjct: 191 TACTFCGQCVAVCPTGALVEKSYIDQVWDVIEDP----------TKHVVVQTAPAVRVAL 240
Query: 129 GAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG-GPLFT 186
G +F + KL K LG D V D + +++E +EF +R +GG P+ T
Sbjct: 241 GEEFGYEPGTISTGKLVSALKVLGFDKVFDTNFSADLTIMEEASEFKERLENGGYMPMLT 300
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + E + +L S KSPQQ+ G++ KT+ A+K G+ P I V++MPC
Sbjct: 301 SCCPGWVKFLEHQFPD-LLEMPSSAKSPQQMFGAIAKTYYAQKAGIDPKDIVVVSVMPCL 359
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA+R + + GY+DVD VIT EL ++ + Q +G D P E
Sbjct: 360 AKKYEANREEMRDS--GYKDVDYVITTRELADMIRE--SGINFQNLPEGEYDNPLGESTG 415
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
+ +GG A L A + E V+F+ LR + +R A +R
Sbjct: 416 AADIFGR---TGGVAEAALRTAYEWITGEELKDVDFEALRGYEGVRIAEVDIKGQKIRIG 472
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETIL 425
+A+G N++ L++ ++ ++ IE+MACP GC+ GG Q + + + +E +
Sbjct: 473 VAHGLGNVRKLLEDIREGKVEVHLIEVMACPGGCVGGGGQPYHHGDFNIIKKRMEA---I 529
Query: 426 CDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ KS+P EN +++ LY +L ++K +L+T Y
Sbjct: 530 NKIDKSKPIRKSHENPSIKKLYDEFLEKPLSEKSHKLLHTRY 571
>gi|374581149|ref|ZP_09654243.1| hydrogenase, Fe-only [Desulfosporosinus youngiae DSM 17734]
gi|374417231|gb|EHQ89666.1| hydrogenase, Fe-only [Desulfosporosinus youngiae DSM 17734]
Length = 527
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 190/417 (45%), Gaps = 48/417 (11%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C CI S I+++ ++V+K I + N T+V+ A + LG
Sbjct: 116 CVNCGQCIQWCPSGAISERDDIDKVLKAISDPNI----------TVVVQTAPATRIGLGE 165
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLFT 186
+F + V K ++LG D++ D +++E E + R L P T
Sbjct: 166 EFGMPVGTNVQGKQVAALRKLGFDVIFDTNFTADLTIMEEGTELVKRVKGELKMPIPQLT 225
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + E + + I P +S KSPQQ+ G+L+KT+ AE V P I+ V +MPC
Sbjct: 226 SCCPGWVKFVEYFYPDLI-PNLSTAKSPQQMEGTLMKTYYAETNNVDPKKIFSVAIMPCT 284
Query: 247 DKKLEASRADFY------NEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
KK E R + N+ DVD V+T EL ++ K +D+
Sbjct: 285 AKKFECQRPEMVSARKDLNDSNVSPDVDVVLTTKELARMI------------KRAGIDFT 332
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESP---VVEFKPLRN-PDI 350
+ + L+ +GTG+G G V+ A+R L G+ P + P+R +
Sbjct: 333 SLPDDQYDQLMGSGTGAGAIFGTTGGVMEAAVRSAYYLITGQQPPSALWALTPVRGMQGV 392
Query: 351 REATFTCGDV-TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE 409
+EA V ++ + +G N + ++ +++ + FIE+MACP GC GG Q R
Sbjct: 393 KEAAVNIPGVGDIKVAVISGLANARMVMDQIRAGNTSWAFIEVMACPGGCEYGGGQPRAS 452
Query: 410 KVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
S + ++ AK++ R +N ++ +Y +L ++K + +L+T Y
Sbjct: 453 SPPSDADRNRRAASLYTIDAKAKLRNSHDNPQIKQVYADFLTSPMSEKAEELLHTHY 509
>gi|366165979|ref|ZP_09465734.1| hydrogenase [Acetivibrio cellulolyticus CD2]
Length = 594
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 186/401 (46%), Gaps = 27/401 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
+ C C C+ + +T+ H + KV + N+ K +++ A ++LG
Sbjct: 208 SSCTYCGQCVQVCPTAALTEVYHTD--KVWE-------ALNDPDKHVIVQTAPAVRVALG 258
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F + +V K+ KR+G D V D +++E +E + R + P+ T+
Sbjct: 259 ELFGMEAGSIVTGKMVTALKRMGFDGVFDTDFGADITVMEEASELIYRIKNKKTLPILTN 318
Query: 188 ECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
CP WV + E E I +P S KSP + GS+ KT+ AEK G+ P +I V++MPC
Sbjct: 319 CCPAWVKFIEHQFPELIHIP--STCKSPHIMFGSIAKTYYAEKNGLDPDNIVVVSVMPCI 376
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA R + + + +VD VIT EL ++ A D D P E
Sbjct: 377 AKKAEAKRPELTKD--AHNNVDIVITTRELGAMIRE--AGIEFDRLPDSEFDRPLGETTG 432
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
++ GT +GG V+ A L VEF+ LR + +R+AT GD +
Sbjct: 433 ASVIF--GT-AGGVIEAVMRTACEWLTGEPLKKVEFEELRGLEGVRKATVKIGDQEFKIG 489
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETALELE 422
IA+G N + +++ ++ + Y IEIMACP GC+ GG Q N ++ + A+ E
Sbjct: 490 IASGLGNARMILEDIRDGKADYHAIEIMACPGGCVAGGGQPYHHGNNEIIKKRREAIYEE 549
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ KS EN + LYK +LG + +L+T +
Sbjct: 550 DKNKKIRKS--HENKEVLELYKNYLGEPFGEDAHELLHTHF 588
>gi|154248935|ref|YP_001409760.1| hydrogenase, Fe-only [Fervidobacterium nodosum Rt17-B1]
gi|154152871|gb|ABS60103.1| hydrogenase, Fe-only [Fervidobacterium nodosum Rt17-B1]
Length = 586
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 146/485 (30%), Positives = 225/485 (46%), Gaps = 54/485 (11%)
Query: 9 VLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAK-IRIQDDGAYIQETNGRE-------- 59
++ + D+ G + + K I I PS R +K I+ Q E G
Sbjct: 112 LVHMYDIKPIFGVNVDMDKEIDISSPSINRELSKCIKCQRCVRVCSEIQGMNIYSMVDRG 171
Query: 60 -EKLKKVEISL----TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENT 113
E L + E + T+C++C C I + ++V+ ++ + E
Sbjct: 172 YESLPETEFGIPVYETNCISCGQCAYLCPVGAIYEAPDWKKVLNLL--------NKKEPG 223
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENE 172
K V A +++G +F + V K+ +RLG D V D A +++E E
Sbjct: 224 KVYVAQTAPSVRVAIGEEFGVEPGTVSTGKMVAALRRLGFDYVFDTNFAADLTIMEEGYE 283
Query: 173 FLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
+ R +GG P+FTS CPGWV EK E + +S KSPQQ+M S++KT+ A+K+G
Sbjct: 284 LIHRLQNGGKFPMFTSCCPGWVNEMEKEWPE-LRENLSTAKSPQQMMSSVVKTYFAQKIG 342
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLA-NELATTTLQ 290
V P I V++MPC KK E +R + G + D VIT EL L+ + L
Sbjct: 343 VKPEDIVMVSVMPCTAKKDEITRPQQLVD--GIKVTDYVITTRELGKLIKLKGIPFVNLP 400
Query: 291 EEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFK 343
EE+ D P L TG+G G V+ A+R ++ GE P + F
Sbjct: 401 EEQ---YDSP----------LGTSTGAGALFGVTGGVMEAALRTAYEVITGEKLPKLVFD 447
Query: 344 PLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNG 402
+R D +REA LR IA+G N++ L+ ++K + YDF+EIMAC GC+ G
Sbjct: 448 SVRGLDGVREAEIDIKGKKLRVAIAHGMANVKRLLAEMKEGKRYYDFVEIMACYGGCIGG 507
Query: 403 GAQIRNEKVASPKETALELETI--LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
G Q +N K+ A + +I L L +S EN + LY+ +L ++ K H+L+
Sbjct: 508 GGQPKNLDPDILKKRAAAIYSIDELSVLRRS--HENPDIIKLYEEFLEKPNSHKAHHLLH 565
Query: 461 TSYHN 465
T Y +
Sbjct: 566 THYTD 570
>gi|218133997|ref|ZP_03462801.1| hypothetical protein BACPEC_01887 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991372|gb|EEC57378.1| hydrogenase, Fe-only [[Bacteroides] pectinophilus ATCC 43243]
Length = 573
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 197/410 (48%), Gaps = 33/410 (8%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I DC AC C+T + ++ +++ KV+ A+ N+ V+ +A
Sbjct: 182 KIEHADCAACGQCVTHCPVGALREK--DDIGKVL-------AALNDPETITVVQVAPAVR 232
Query: 126 LSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
+ G + + K L + +G D V D + +++E NEF++R +
Sbjct: 233 TAWGEDLGMPGDVATEKRLASVLRHIGFDYVFDTNFSADLTIMEEGNEFIERLKNPDKSR 292
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + + + EF+ +S KSPQQ+ G+++K++ A+K + PS I V+
Sbjct: 293 LPMFTSCCPGWVRFVKSQYPEFV-DNLSTAKSPQQMFGAVVKSYFAKKADIDPSRICSVS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA+ + + G +DVD V+T E L+ E E+D D P
Sbjct: 352 IMPCTAKKAEAAYDNMSSAGYG-QDVDYVLTTREFARLVRGEAIIPEALPEED--FDSPL 408
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVE-FKPLR--NPDIREATFTCG 358
++ ++ +GG L A L G++P + F +R NP +EA F G
Sbjct: 409 GTYSGAGVIF---GATGGVMEAALRSAF-YLVTGKNPDADAFSAVRGMNP-WKEAAFNVG 463
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+R +G N + L+ +KR + YDF+E+MACP GC+ GG Q + +E A
Sbjct: 464 GNEIRTATVHGLGNTRQLLDAIKRGEVKYDFVEVMACPGGCVGGGGQ----PIRDGQELA 519
Query: 419 LELETILCDLAKSE----PRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
+ IL L +S+ EN + +Y+ + ++ +L+T +H
Sbjct: 520 KDRAPILYSLDRSKNIRFSHENPDVLKMYEEFFEKPNSPVAHKLLHTDHH 569
>gi|316931523|ref|YP_004106505.1| hydrogenase, Fe-only [Rhodopseudomonas palustris DX-1]
gi|315599237|gb|ADU41772.1| hydrogenase, Fe-only [Rhodopseudomonas palustris DX-1]
Length = 619
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 193/407 (47%), Gaps = 40/407 (9%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C++C C+ + + ++ E A + N T+V A ++ G +
Sbjct: 213 CVSCGQCVLVCPTGALGERDETE--------RALSYICDPNVVTVV-QFAPAVRVAFGEE 263
Query: 132 FAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPLFTSECP 190
F + + V ++ ++LGVD+VLD A ++E E L R G P FTS CP
Sbjct: 264 FGMPAGTNVEGQIIAACRKLGVDVVLDTNFAADVVIMEEGAELLARLKQGRRPTFTSCCP 323
Query: 191 GWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKL 250
W+ +AE H +LP +S KSPQQV+ ++ K++L E+LGV I +++MPC KK
Sbjct: 324 AWINFAE-IHYPDVLPLLSSTKSPQQVLSTIAKSYLPEQLGVSAERIRVISIMPCIAKKD 382
Query: 251 EASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRML 310
EA R ++ G + D V+T E L L+ E + D P + + R
Sbjct: 383 EAVRPQMVHD--GRPETDLVLTTREFARL---------LRREGIDLKDLPSSQFD--RPF 429
Query: 311 LVNGTGSG---GYAHNVLSHAIRQLCP----GESPVVEFKPLRNPD-IREATFTCGDVT- 361
L +G+G G V+ A+R + E +E LR + +REA G
Sbjct: 430 LSAYSGAGAIFGTTGGVMEAAVRTIYALVNGRELDRIELMQLRGFEGLREAVVDLGGPVG 489
Query: 362 -LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALE 420
++ + +G + + L++ + + YDFIE+MACP GC++GG +R++K P AL+
Sbjct: 490 EVKVAMVHGLGDTRRLVESVLSGQANYDFIEVMACPGGCVDGGGSLRSKKAYLP--LALK 547
Query: 421 LETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ ++ ++ + N ++ LY+ L +++ +L+T Y
Sbjct: 548 RRETIYNVDRAAKVRQSHNNPQVQALYRELLQAPNSEIAHRLLHTHY 594
>gi|154248924|ref|YP_001409749.1| hydrogenase, Fe-only [Fervidobacterium nodosum Rt17-B1]
gi|154152860|gb|ABS60092.1| hydrogenase, Fe-only [Fervidobacterium nodosum Rt17-B1]
Length = 667
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 193/433 (44%), Gaps = 38/433 (8%)
Query: 38 RTGAKIRIQDDGAYIQETNGREEKLKKVEISLTDCLACSGCITSAES-VLITQQSHEEVM 96
+T A I G Q EEKL+ T+C+ C C+ + L + ++V
Sbjct: 158 QTVAAIDFAYRGFEAQVVPSFEEKLEN-----TECVFCGQCVAYCPTGALAIRNDVDKVY 212
Query: 97 KVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVA-KLCGFFKRLGVDLV 155
K I E K ++ +A SL +F + + +A ++ K +G V
Sbjct: 213 KAIEEG-----------KYVIGMIAPAVRASLQEEFGMEDDIAMAGRMVSILKMIGFKKV 261
Query: 156 LDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSP 214
DV A E +EF++R +G P FTS CPGWV +AE+ + E+ LP +S VKSP
Sbjct: 262 FDVAFAADLVAYEEAHEFMERLENGEKLPQFTSCCPGWVKFAEQYYPEY-LPNLSSVKSP 320
Query: 215 QQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAV 274
Q +G++IK + A ++GV+P I V++MPC KK EA R +F D+D V+T
Sbjct: 321 QMALGAIIKKYYAREIGVNPEDIVLVSIMPCTAKKFEAEREEFEG------DIDIVLTTR 374
Query: 275 EL-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLC 333
EL ++ A + ++ E D P+ + + G G V+ +
Sbjct: 375 ELVKIFKATGIDIKMVEPES---FDRPYGLSSQSGLSFGKTGGVLGSVVKVIEDKVNVKS 431
Query: 334 PGESPVVEFKPLRNPDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIM 393
+ + ++ E G V +R G N++ +I +K RL D +E+M
Sbjct: 432 VNTREIAQ-----GVNLTEVELENGKV-VRGVAVFGLGNVRKVISDIKEGRLNADVVEVM 485
Query: 394 ACPSGCLNGGAQ-IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKST 452
AC GC+ GG Q N+ + + ET D+ S P EN + LY + G +
Sbjct: 486 ACNYGCIGGGGQPYPNDVRTRARRAKILKETQSVDVLIS-PTENFHMRELYTKYFGAPLS 544
Query: 453 DKGKHMLNTSYHN 465
+ +L+T Y +
Sbjct: 545 HEAHEVLHTEYKH 557
>gi|336428255|ref|ZP_08608239.1| hypothetical protein HMPREF0994_04245 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336006491|gb|EGN36525.1| hypothetical protein HMPREF0994_04245 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 571
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 172/353 (48%), Gaps = 39/353 (11%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+++ TDC+ C C + I ++ ++ KV R S + +K +V+ +A
Sbjct: 183 KLAETDCVNCGQCAAVCPTAAIKVKT--DMDKVWR-------SLYDPSKRVVVQVAPAVR 233
Query: 126 LSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
++LG F L E + ++ + LG D V D + +++E E ++ SG
Sbjct: 234 VALGEAFGLQPGEDSIGRIFTAIRMLGFDAVYDTCVGADLTIMEEAKELAEKLESGDDRF 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CP W+ +AE H + ILPYIS KSP ++ G+++K + EK V +
Sbjct: 294 PLFTSCCPAWIRFAETRHPD-ILPYISTCKSPMEMFGAVLKEYYKEKDAEEEKSTISVAI 352
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK+EA R +F + G DVD VIT EL ++ + GI +D
Sbjct: 353 MPCVAKKMEAVREEFKRD--GIPDVDYVITTKELIRMI-----------RESGI---QFD 396
Query: 303 EHNPHR--MLLVNGTGSG---GYAHNVLSHAIRQLCPGESPV----VEFKPLRNPD-IRE 352
E +P M +G+G G V A+R+L +S ++F +R + ++E
Sbjct: 397 EIDPEAPDMPFSISSGAGVIFGVTGGVTEAALRRLVQEKSTQALRDIKFSGIRGMEGVKE 456
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
A TLR + +G N +LI+K+K +DF+E+MACP GC+ G Q
Sbjct: 457 ALLELNGRTLRIGVVSGLGNADDLIEKIKSGEEHFDFVEVMACPYGCIAGAGQ 509
>gi|217077862|ref|YP_002335580.1| hydrogenase [Thermosipho africanus TCF52B]
gi|217037717|gb|ACJ76239.1| hydrogenase [Thermosipho africanus TCF52B]
Length = 583
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 200/412 (48%), Gaps = 40/412 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+C++C C I + +V+K++ ++ K +V A +++
Sbjct: 186 TNCISCGQCAYLCPVGAIYETPDWRKVLKIL---------DKKDNKILVAQTAPSVRVAI 236
Query: 129 GAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F + V K+ ++LG D V D A +++E E + R GG P+FT
Sbjct: 237 GEEFGMEPGSVSTGKMVAAIRKLGFDYVFDTNFAADLTIMEEGTELIGRIKDGGPFPMFT 296
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGW+ EK + EFI S KSPQQ+M S++KT+ A+K+GV P I V++MPC
Sbjct: 297 SCCPGWINLLEKEYPEFI-NNASSAKSPQQMMSSIVKTYFAKKIGVDPEDIIMVSIMPCT 355
Query: 247 DKKLEASRADFYNEELGYRDV---DCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
KK E +R + R++ D VIT EL L+ + Q G+ D +D
Sbjct: 356 AKKDEITRPQQKIKLEDGREIKTTDYVITTRELAKLIKMK------QINFIGLDDEDFD- 408
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQ----LCPGESPVVEFKPLRNPD-IREATF 355
NP L TG+G G V+ A+R + + P +EF +R D IREA
Sbjct: 409 -NP----LGTSTGAGAIFGVTGGVMEAALRTAYEIITNKKLPKLEFNAVRGLDGIREAEI 463
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
L+ IA+G N++ L+ ++ YDFIEIMACP GC+ GG Q ++ K
Sbjct: 464 DIEGKKLKVAIAHGTANVKKLLDDIRDGVRYYDFIEIMACPGGCIGGGGQPKSLDPDILK 523
Query: 416 ETALELETI--LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ A + +I L L +S EN ++ LY+ +L ++ +L+T Y +
Sbjct: 524 KRASAIYSIDELSTLRRS--HENPDIQKLYEEFLEKPNSHIAHELLHTYYTD 573
>gi|301507726|gb|ADK77883.1| hydrogenase [Chlorella sp. DT]
Length = 434
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 180/384 (46%), Gaps = 34/384 (8%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFS 165
A E+ + ++ +A +++ L+ V + +L + LG D V D +
Sbjct: 49 AKPKESRRLMIAQIAPAVRVAIAETIGLAPGDVTIGQLVTGLRMLGFDYVFDTLFGADLT 108
Query: 166 LVELENEFLDRFLSG---------GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
++E E L R P+FTS CPGWV EKS+ E I PY+S KSPQ
Sbjct: 109 IMEEGTELLHRLQDHLEQHPNKEEPLPMFTSCCPGWVAMVEKSNPELI-PYLSSCKSPQM 167
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL 276
++G++IK + A+++GV PS I +V++MPC K+ EA R +++N RDVD V+T E+
Sbjct: 168 MLGAVIKNYYAQQVGVQPSDICNVSVMPCVRKQGEADR-EWFNTTGLARDVDHVVTTAEV 226
Query: 277 -EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPG 335
++ L + L E D P E +L G A + + Q G
Sbjct: 227 GKIFLERGIKLNELPESN---FDNPIGEGTGGALLFGTTGGVMEAALRTVYEVVTQKPMG 283
Query: 336 ESPVVEFKPLRNPDIREATFTCGD--------------VTLRFCIANGFRNIQNLIQKLK 381
E + L E T GD +TL+ +ANG N + LI+ L
Sbjct: 284 RVDFEEVRGLEGIKEAEITLKPGDDSPFKAFAGADGQGITLKIAVANGLGNAKKLIKSLS 343
Query: 382 RKRLPYDFIEIMACPSGCLNGGAQIR--NEKVASPKETALELETILCDLAKSEPRENATL 439
+ YDFIE+MACP GC+ GG Q R ++++ ++ A+ + +S EN +
Sbjct: 344 EGKAKYDFIEVMACPGGCIGGGGQPRSTDKQILQKRQQAMYNLDERSAIRRS--HENPFI 401
Query: 440 EHLYKAWLGGKSTDKGKHMLNTSY 463
+ LY +LG ++ K +L+T Y
Sbjct: 402 QALYDKFLGAPNSHKAHDLLHTHY 425
>gi|283797458|ref|ZP_06346611.1| ferredoxin hydrogenase [Clostridium sp. M62/1]
gi|291074825|gb|EFE12189.1| hydrogenase, Fe-only [Clostridium sp. M62/1]
gi|295115958|emb|CBL36805.1| hydrogenases, Fe-only [butyrate-producing bacterium SM4/1]
Length = 588
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 196/415 (47%), Gaps = 43/415 (10%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
EI +DC C CIT + + Q ++V ++ N N K V+ +A
Sbjct: 182 EIKASDCSLCGQCITHCPTGAL--QERDDVSRIFSMN----GDLNNPDKITVVQIAPAVR 235
Query: 126 LSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL---SGG 181
+ G +F LS E K L +R+G D + D + +++E E ++R
Sbjct: 236 AAWGEEFGLSREFATDKRLVAALRRMGFDYIFDTTFSADLTIMEEGTELIERLKHREEFQ 295
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS + +S KSPQQ+ G++ K+ A KLGV P ++ ++
Sbjct: 296 WPMFTSCCPGWVRFL-KSQYPDMEGQLSTAKSPQQMFGAVTKSFFAAKLGVDPDNVTCIS 354
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA Y+ + +DVD V+T E+ ++ A ++ +L EE+ D P
Sbjct: 355 IMPCVAKKQEADLPTMYDGSV--KDVDYVLTTREICRLIKAEQIDVFSLPEEE---FDSP 409
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGESPVVE-FKPLRNPD-IRE 352
E TG+G G V+ A+R L G++P + F +R D +E
Sbjct: 410 LGE----------STGAGIIFGATGGVMEAALRTGYHLVMGKNPDPDAFSAVRGMDGWKE 459
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
A F G LR +A+G N + LI ++R YDF+EIMACP GC GG Q +
Sbjct: 460 AEFRLGGTVLRTAVASGLGNTRRLINAIRRGEASYDFVEIMACPGGCAGGGGQ----PIH 515
Query: 413 SPKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+E A L + + P EN ++ LY+A+ G + +L+T +
Sbjct: 516 DGREEAANRSETLYQMDQKNPVRFSHENHEVQELYRAYFGKPGSHLAHRLLHTDH 570
>gi|289432125|ref|YP_003461998.1| hydrogenase, Fe-only [Dehalococcoides sp. GT]
gi|288945845|gb|ADC73542.1| hydrogenase, Fe-only [Dehalococcoides sp. GT]
Length = 573
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 187/373 (50%), Gaps = 29/373 (7%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFS 165
A+ + K +V+ A +SLG + L +VAK + +RLG D V D +
Sbjct: 216 AAIADPAKHVVVQEAPSIRVSLGEELGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLT 275
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E +E ++R GG P TS CPGWV + E + E + P +S KSPQQ+ G++ KT
Sbjct: 276 ILEEGSELVERVKEGGVLPQLTSCCPGWVKFMEHYYPE-LAPNVSSAKSPQQMFGAVCKT 334
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEK G+ P I +V++MPC KK E R + + G++DVD V+T EL ++
Sbjct: 335 YYAEKAGIDPKTIVNVSVMPCTAKKFECQRPEMNDS--GFKDVDYVLTTRELARMI---- 388
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPG-ES 337
K+ LD+ + P LL TG+ G V+ AIR L G E
Sbjct: 389 --------KEAGLDFVSLDEEPAEDLLGLYTGAATIFGATGGVMEAAIRSAYMLITGREL 440
Query: 338 PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
++ +P+R + ++ AT + L+ +A+G N + L++++K PY FIEIMACP
Sbjct: 441 ENLDIEPVRGLEGVKTATLNVDGLELKVAVAHGLGNARALLEEIKEGTSPYHFIEIMACP 500
Query: 397 SGCLNGGAQ-IR-NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDK 454
GC+ GG Q IR + + + AL E ++ K N ++ +Y +L +
Sbjct: 501 GGCVGGGGQPIRFDSSLKKKRGEALYEEDR--NMPKRCSHHNPSIAKIYADYLEKPLGKR 558
Query: 455 GKHMLNTSYHNIP 467
+L+T Y + P
Sbjct: 559 SHKLLHTEYTSRP 571
>gi|169343832|ref|ZP_02864829.1| [Fe] hydrogenase [Clostridium perfringens C str. JGS1495]
gi|169297952|gb|EDS80043.1| [Fe] hydrogenase [Clostridium perfringens C str. JGS1495]
Length = 696
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 194/420 (46%), Gaps = 45/420 (10%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C + IT+ V A S+++ K +++S + +SLG +
Sbjct: 58 CINCGQCANVCPTSSITE--------VFDYKKVQDAISDKD-KIVIVSTSPAIRVSLGEE 108
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTSE 188
F ++ V K+ ++LG D VLD A ++VE +E ++R PL FTS
Sbjct: 109 FNMNDGSFVQGKMIALLRKLGFDYVLDTNFAADMTIVEEASELVERITKNNKPLSQFTSC 168
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP WV YAE H E IL +IS KSP + G IKT+ A+K+G+ P I +V L PC K
Sbjct: 169 CPAWVKYAETFHPE-ILEHISTSKSPIGMQGPTIKTYFAKKMGIDPYKIINVALTPCTAK 227
Query: 249 KLEASRAD------FYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
K E R + +Y E RD+D VIT E+ + K+ +D+
Sbjct: 228 KFEIKREEMNASGRYYGIE-DMRDMDYVITTREVAIWA------------KEKGIDFNSL 274
Query: 303 EHNPHRMLLVNGTGSGGYAHN---VLSHAIR---QLCPGESPVVEFKPLRN----PDIRE 352
E + L+ +G+G N V+ A+R + E P +F L + +RE
Sbjct: 275 EDSNFDKLMGEASGAGVIFANTGGVMEAALRTAYKYITKEDPPKDFYDLESVRGMEGVRE 334
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
A+F D+ + + G N I K+K Y FIE+M CP GC+ GG Q +++K
Sbjct: 335 ASFKINDLEINIAVIYGTENASKFISKMKNSDKKYHFIEVMTCPGGCIGGGGQPKDKKFE 394
Query: 413 SPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
K ++ + + + R EN ++ LY+ + ++ + ML+T Y + K+
Sbjct: 395 GDKLREKRIDGLYKRDSNMKLRVSYENEEIKKLYEEFYEKPLSNLAEEMLHTIYFDRSKD 454
>gi|147668873|ref|YP_001213691.1| hydrogenase, Fe-only [Dehalococcoides sp. BAV1]
gi|146269821|gb|ABQ16813.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Dehalococcoides sp. BAV1]
Length = 573
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 187/373 (50%), Gaps = 29/373 (7%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFS 165
A+ + K +V+ A +SLG + L +VAK + +RLG D V D +
Sbjct: 216 AAIADPAKHVVVQEAPSIRVSLGEELGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLT 275
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E +E ++R GG P TS CPGWV + E + E + P +S KSPQQ+ G++ KT
Sbjct: 276 ILEEGSELVERVKEGGVLPQLTSCCPGWVKFMEHYYPE-LAPNVSSAKSPQQMFGAVCKT 334
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEK G+ P I +V++MPC KK E R + + G++DVD V+T EL ++
Sbjct: 335 YYAEKAGIDPKTIVNVSVMPCTAKKFECQRPEMNDS--GFKDVDYVLTTRELARMI---- 388
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPG-ES 337
K+ LD+ + P LL TG+ G V+ AIR L G E
Sbjct: 389 --------KEAGLDFVSLDEEPAEDLLGLYTGAATIFGATGGVMEAAIRSAYMLITGREL 440
Query: 338 PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
++ +P+R + ++ AT + L+ +A+G N + L++++K PY FIEIMACP
Sbjct: 441 ENLDIEPVRGLEGVKTATLNVDGLELKVAVAHGLGNARALLEEIKEGTSPYHFIEIMACP 500
Query: 397 SGCLNGGAQ-IR-NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDK 454
GC+ GG Q IR + + + AL E ++ K N ++ +Y +L +
Sbjct: 501 GGCVGGGGQPIRFDSSLKKKRGEALYEEDR--NMPKRCSHHNPSIAKIYADYLEKPLGKR 558
Query: 455 GKHMLNTSYHNIP 467
+L+T Y + P
Sbjct: 559 SHKLLHTEYTSRP 571
>gi|303249089|ref|ZP_07335331.1| hydrogenase, Fe-only [Desulfovibrio fructosovorans JJ]
gi|1914864|emb|CAA72423.1| cytochrome-c3 hydrogenase [Desulfovibrio fructosovorans JJ]
gi|302489504|gb|EFL49448.1| hydrogenase, Fe-only [Desulfovibrio fructosovorans JJ]
Length = 421
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 158/346 (45%), Gaps = 35/346 (10%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C+T I E + + E A ++N K I + A +LG
Sbjct: 66 CINCGQCLTHCPVAAIY-----ETVSFVPEIEAK--LKDKNVKVIAMP-APAVRYALGDP 117
Query: 132 FALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGGPLFTS 187
F + V + + K+LG D V D ++ E +E L R L P FTS
Sbjct: 118 FGMPLGAVTTEHMLTGLKQLGFDNVWDNEFTADVTIWEEGSELLARITKKLDKPLPQFTS 177
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGW YAE + E +LP+ S KSP +MG L KT+ A++LG P IY V++MPC
Sbjct: 178 CCPGWQKYAETFYPE-LLPHFSSCKSPIGMMGPLAKTYGAKELGYEPKQIYTVSIMPCTA 236
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK E R + + G+RD+D I EL ++ +K GI D P +
Sbjct: 237 KKFEGMRPEM--DASGFRDIDATINTRELAYMM-----------KKAGI-DLPKIANGKR 282
Query: 308 RMLLVNGTG-------SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
++ TG SGG L A + L +FK +R + I+EAT G
Sbjct: 283 DAVMGESTGGATIFGVSGGVMEAALRFAYQALTKKPPQSWDFKAVRGLNGIKEATINIGG 342
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
++ + NG +N + ++K + PY FIE MACP GC+ GG Q
Sbjct: 343 TDVKVAVVNGGKNFAKVCDEVKAGKSPYHFIEFMACPGGCVMGGGQ 388
>gi|373489099|ref|ZP_09579762.1| hydrogenase, Fe-only [Holophaga foetida DSM 6591]
gi|372004575|gb|EHP05214.1| hydrogenase, Fe-only [Holophaga foetida DSM 6591]
Length = 531
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 190/380 (50%), Gaps = 42/380 (11%)
Query: 110 NENTKTIVLSLAIQPVLSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVE 168
+ TK +++ A + LG +F + + V K +RLG V D +++E
Sbjct: 140 KDPTKVVIVQTAPSTRVGLGEEFGMPAGSWVEGKQVAALRRLGFSRVFDTNFTADLTIME 199
Query: 169 LENEFLDRFLSGGG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
+E ++R L+G P TS CPGWV + E + E+ +P +S KSPQQ++G+++KT
Sbjct: 200 EGSELIER-LTGKSEAPLPQLTSCCPGWVKFVEYYYPEW-MPNLSTAKSPQQMLGAVLKT 257
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF-----YNEELGYRDVDCVITAVELEVL 279
+ A+K G+ P I+ V++MPC KK E++R +F Y + G RD+D V+T EL +L
Sbjct: 258 YYAKKTGIDPRTIFSVSVMPCTAKKFESARPEFNAAGRYWKNDGLRDIDAVLTVRELALL 317
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG-------SGGYAHNVLSHAIRQL 332
+ K+ LD+ + LL G+G +GG + A +
Sbjct: 318 M------------KEAGLDFASLPEESYDSLLGEGSGAALIFGSTGGVMEAAVRTAYHAV 365
Query: 333 CPGESPVVEF--KPLRN-PDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYD 388
++P + F P+R ++EA+ G + +A+G N + L+ ++K YD
Sbjct: 366 TGQKAPALAFDLAPVRGLSGVKEASLDVPGHGKVCVAVAHGLHNARTLLDRVKAGTARYD 425
Query: 389 FIEIMACPSGCLNGGAQIRN-----EKVASPKETALELETILCDLAKSEPRENATLEHLY 443
FIE+M+CP GC+ GG R+ + V + +L+++ L +S EN ++ LY
Sbjct: 426 FIEVMSCPGGCIGGGGMPRSSVPPADDVRRSRIRSLQVKDAAGTLRESH--ENQEIKELY 483
Query: 444 KAWLGGKSTDKGKHMLNTSY 463
+++LG + +L+T Y
Sbjct: 484 RSFLGRPLSHLSHELLHTDY 503
>gi|326202424|ref|ZP_08192293.1| hydrogenase, Fe-only [Clostridium papyrosolvens DSM 2782]
gi|325987542|gb|EGD48369.1| hydrogenase, Fe-only [Clostridium papyrosolvens DSM 2782]
Length = 592
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 191/402 (47%), Gaps = 29/402 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
+ C C C+ + +T+ H ++V + I + + K +++ A ++L
Sbjct: 206 SSCTYCGQCVQVCPTAALTEVYHTDKVWEAISDPD----------KYVIVQTAPAIRVAL 255
Query: 129 GAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + +V K+ KR+G D V D +++E +E + R + P+ T
Sbjct: 256 GELFGMEPGTIVTGKMVTALKRMGFDAVFDTDFGADLTIMEEASELIYRLKNNKTLPILT 315
Query: 187 SECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
+ CP WV + E E I +P S KSP ++G++ KT+ A+K G+ P++I V++MPC
Sbjct: 316 NCCPAWVKFIEHQFPELIHVP--STCKSPHIMLGTIAKTYYAKKNGIDPNNIVVVSIMPC 373
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA R + +E + +VD IT EL ++ T+ D D P E
Sbjct: 374 IAKKAEAKRPELTKDE--HNNVDISITTRELGAMIREAGIEFTML--PDSEFDSPLGETT 429
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRF 364
++ GT +GG L A L V+F+ LR D +R AT GD L+
Sbjct: 430 GASVIF--GT-AGGVIEAALRTASEWLTGKPLEKVDFEELRGMDGVRRATVKIGDQELKI 486
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETALEL 421
IA+G N +++++ ++ + Y IEIMACP GC+ GG Q N+++ + A+
Sbjct: 487 GIASGLGNARHILEDIRDGKADYHAIEIMACPGGCIAGGGQPYHHGNDEIIKKRIEAIYE 546
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E + KS EN + LYK +LG + +L+T +
Sbjct: 547 EDRRKPVRKS--HENKEILELYKTYLGEPFGELAHELLHTHF 586
>gi|451819272|ref|YP_007455473.1| [FeFe] hydrogenase, group A [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451785251|gb|AGF56219.1| [FeFe] hydrogenase, group A [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 457
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 195/410 (47%), Gaps = 34/410 (8%)
Query: 72 CLACSGC--ITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
C+ C C + +S++ T + EVM+ I N+ K ++++ + +SLG
Sbjct: 58 CINCGQCANVCPVDSIIETYE-FREVMEAI----------NDKDKIVIVNTSPSVRVSLG 106
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
+F + V K+ ++LGV+ VLD +++E +E ++R P FTS
Sbjct: 107 EEFGMEDGSFVQGKMVALLRKLGVNYVLDTNFGADLTIMEEASELIERVKKNKNLPQFTS 166
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + E I+P IS KSP + G +K++ AE + + P I +V L PC
Sbjct: 167 CCPAWVKFAETYYPE-IIPNISTSKSPIGMQGPTVKSYFAESMDIDPKKIVNVALTPCTA 225
Query: 248 KKLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E R + Y + RD+D VIT EL L A E +D D
Sbjct: 226 KKFEIRREEMKDAGNYLDIDDMRDMDYVITTREL-ALWAKEKGID-FNSLEDSEFDRVMG 283
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRN-PDIREATFTCGD 359
E + ++ N +GG L A + + P + + KP+R +++EA+ GD
Sbjct: 284 EASGAGVIFGN---TGGVMEAALRTAYEFITKEKVPDTLYDLKPVRGMEEMKEASLDIGD 340
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
+TL + G N++ ++ KLK Y FIE+M CP GC+ GG Q ++ ++ KE
Sbjct: 341 ITLNVAVIYGTDNVRKMMDKLKTSDKQYHFIEVMTCPGGCIGGGGQAKH-RIDKIKEANE 399
Query: 420 ELETILCD----LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ L D + +N +E LY + G ++ + ML+TSY++
Sbjct: 400 KRIMSLYDKDNKMKLRLSHKNPEIEMLYNEFYGEPLSELAEKMLHTSYYS 449
>gi|73748099|ref|YP_307338.1| [Fe] hydrogenase, large subunit HymC [Dehalococcoides sp. CBDB1]
gi|73659815|emb|CAI82422.1| putative [Fe] hydrogenase, large subunit HymC [Dehalococcoides sp.
CBDB1]
Length = 573
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 187/373 (50%), Gaps = 29/373 (7%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFS 165
A+ + K +V+ A +SLG + L +VAK + +RLG D V D +
Sbjct: 216 AAIADPAKHVVVQEAPSIRVSLGEELGLPAGTLVAKKMYAALRRLGFDAVFDTNFTADLT 275
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E +E ++R GG P TS CPGWV + E + E + P +S KSPQQ+ G++ KT
Sbjct: 276 ILEEGSELVERVKEGGVLPQITSCCPGWVKFMEHYYPE-LAPNVSSAKSPQQMFGAVCKT 334
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEK G+ P I +V++MPC KK E R + + G++DVD V+T EL ++
Sbjct: 335 YYAEKAGIDPKTIVNVSVMPCTAKKFECQRPEMNDS--GFKDVDYVLTTRELARMI---- 388
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPG-ES 337
K+ LD+ + P LL TG+ G V+ AIR L G E
Sbjct: 389 --------KEAGLDFVSLDEEPAEDLLGLYTGAATIFGATGGVMEAAIRSAYMLITGREL 440
Query: 338 PVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
++ +P+R + ++ AT + L+ +A+G N + L++++K PY FIEIMACP
Sbjct: 441 ENLDIEPVRGLEGVKTATLNVDGLELKVAVAHGLGNARALLEEIKEGTSPYHFIEIMACP 500
Query: 397 SGCLNGGAQ-IR-NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDK 454
GC+ GG Q IR + + + AL E ++ K N ++ +Y +L +
Sbjct: 501 GGCVGGGGQPIRFDSSLKKKRGEALYEEDR--NMPKRCSHHNPSIAKIYADYLEKPLGKR 558
Query: 455 GKHMLNTSYHNIP 467
+L+T Y + P
Sbjct: 559 SHKLLHTEYTSRP 571
>gi|389615008|dbj|BAM20504.1| probable cytosolic Fe-S cluster assembly factor [Papilio polytes]
Length = 138
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 91/137 (66%), Gaps = 2/137 (1%)
Query: 342 FKPLRNPDIREATFTC-GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCL 400
+K LRNPD +E T G+V LRF +ANGFRNIQNL+ KLKR + PY ++E+MACPSGCL
Sbjct: 3 YKELRNPDFKELTLEREGEVVLRFAVANGFRNIQNLVTKLKRGKSPYHYVEVMACPSGCL 62
Query: 401 NGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
NGGAQ+R S +E LE L ++ P + LY+ + G +DK + ML+
Sbjct: 63 NGGAQVRPNNGESGRELIASLEAAYRALPRARPARSRLARSLYER-MHGAGSDKARDMLH 121
Query: 461 TSYHNIPKNNIALNVKW 477
T+YH + KN+IALN+KW
Sbjct: 122 TTYHAVEKNDIALNIKW 138
>gi|298375635|ref|ZP_06985592.1| hydrogenase large subunit HymC [Bacteroides sp. 3_1_19]
gi|298268135|gb|EFI09791.1| hydrogenase large subunit HymC [Bacteroides sp. 3_1_19]
Length = 596
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 173/363 (47%), Gaps = 22/363 (6%)
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
TK ++ A +LG F +V K+ ++LG D V D A +++E
Sbjct: 227 TKIVIAQTAPAVRTALGRDFGYEPGTLVTGKMVSALRQLGFDYVFDTDFAADLTIMEEGT 286
Query: 172 EFLDR---FLSGGG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
E L R +L+G PL TS CPGWV + E+ E + ++S KSPQQ+ G++ K+
Sbjct: 287 ELLHRLGSYLNGDKEVKIPLMTSCCPGWVSFVEQHFPE-LRDHLSTAKSPQQMFGAIAKS 345
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEKLGV + V++MPC KK EASR +F E G DVD I EL L+
Sbjct: 346 YFAEKLGVDRKDLVVVSIMPCLAKKYEASRPEFSVE--GNPDVDYSIYTRELARLI--RY 401
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKP 344
A E DG D P E ++ GT +GG A V+F+
Sbjct: 402 ANIDFNELPDGEFDRPLGESTGASVIF--GT-TGGVIEAACRTAYELYTKKNLDKVDFEE 458
Query: 345 LRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGG 403
LR + IR AT +++ IA+G N + LI+++K PY IE+MACP GC+ GG
Sbjct: 459 LRGLEGIRSATIDFNGTSVKIGIAHGLGNARKLIEEVKNGTSPYHAIEVMACPGGCIGGG 518
Query: 404 AQIRNE---KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
Q + +V + AL E L KS EN ++ LY +LG K +L+
Sbjct: 519 GQPFHRGRMEVLRRRAAALYREDANKPLRKSH--ENPYIQQLYSEYLGEPCGPKAHKLLH 576
Query: 461 TSY 463
T Y
Sbjct: 577 THY 579
>gi|414153110|ref|ZP_11409437.1| Iron hydrogenase 1 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411455492|emb|CCO07339.1| Iron hydrogenase 1 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 523
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 214/446 (47%), Gaps = 62/446 (13%)
Query: 52 IQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSN 110
+Q G E K +I+ C+ C C + IT++ ++V+K + + N H
Sbjct: 93 VQTVYGYYETPIKNDIT---CVNCGQCTLWCPTAAITERDEIDKVVKALEDKNIH----- 144
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVEL 169
+V+ A ++LG +F + +V K K+LG D V D +++E
Sbjct: 145 -----VVVQTAPATRVALGEEFGMPPGSIVEGKQVAALKKLGFDAVFDTNFTADLTIMEE 199
Query: 170 ENEFLDRF---LSGGGPL--FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
E + R L G PL FTS PGWV + E + + +L ++S KSPQQ++G+L+KT
Sbjct: 200 GTELVRRVAGDLKGVKPLPQFTSCSPGWVKFCEYFYPD-LLEHMSSCKSPQQMLGALVKT 258
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFY-------NEELGYRDVDCVITAVELE 277
+ A++ G+ P+ I+ V++MPC KK E +R + NE+L RDVD V+T EL
Sbjct: 259 YYAKEKGIDPAKIFSVSIMPCTAKKYECNRPEMNDAGKHVGNEKL--RDVDVVLTTRELA 316
Query: 278 VLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ--- 331
L+ ++ + +D +++P L+ GTG+ G V+ A+R
Sbjct: 317 RLI--KMKGIDINNLEDA-------QYDP---LMGEGTGAAVIFGATGGVMEAAVRSAYF 364
Query: 332 LCPGESP---VVEFKPLRN-PDIREATFT---CGDVTLRFC--IANGFRNIQNLIQKLKR 382
L E+P ++ P+R ++EA+ G V + C ++N + + L + K+
Sbjct: 365 LITKENPPEALLNLTPVRGLQGVKEASLEIPGVGQVNVAICHGLSNARKVLDQLREDKKQ 424
Query: 383 KRLP-YDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR----ENA 437
+ P Y FIE M+CP GC++GG Q R S + L +I AK + EN
Sbjct: 425 GKPPRYHFIEFMSCPGGCISGGGQPRTSLPPSDQVRQARLNSIYQIDAKIYKKRLSHENQ 484
Query: 438 TLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ LY+ +L ++ + +L+T Y
Sbjct: 485 EVAMLYQKFLEKPNSHLAEELLHTEY 510
>gi|323703080|ref|ZP_08114735.1| hydrogenase, Fe-only [Desulfotomaculum nigrificans DSM 574]
gi|323531974|gb|EGB21858.1| hydrogenase, Fe-only [Desulfotomaculum nigrificans DSM 574]
Length = 554
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 204/436 (46%), Gaps = 39/436 (8%)
Query: 45 IQDDGAYIQETNGREEKLKKV---EISLTDCLACSGCITSAESVLITQQSH-EEVMKVIR 100
+Q G Y+ G E + ++ C+AC C+ + + +T++S+ EEV + +
Sbjct: 110 MQGIGVYVPLNRGYETIIAPAFERNLAEVACIACGQCLLACPTASLTERSYIEEVWQAL- 168
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVA-KLCGFFKRLGVDLVLDVG 159
++ K +V+ A +S+G +F L VV+ KL +RLG D V
Sbjct: 169 ---------DDPAKHVVVQTAPAIQVSIGEEFGLPAGTVVSGKLAASLRRLGFDSVFSTD 219
Query: 160 IAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVM 218
A +++E +E L R GG PL +S PGW+ + E + EFI +S KSP ++
Sbjct: 220 FAADLTIMEEAHELLHRLAKGGPLPLISSCSPGWIKFCEHFYPEFI-DNLSTCKSPMEMF 278
Query: 219 GSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEV 278
G+L KT+ A+K + P + V +MPC KK EA+R + G RDVD V+T EL
Sbjct: 279 GALAKTYYAQKAAIDPKDMVVVAVMPCTAKKFEAARPEMTT--YGLRDVDYVLTTRELAK 336
Query: 279 LLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP 338
+L A L + + D P + + +GG + A+ E
Sbjct: 337 MLRQ--ADINLNKLPEEDFDQPLGLSSGAANIFAT---TGGVMEAAIRTALALTEGKELG 391
Query: 339 VVEFKPLR-NPDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPS 397
+EFK R I+EA TLR +A+G N + L+++LKR + FIEIMAC
Sbjct: 392 RLEFKEFRGTTGIKEAEVELKGQTLRLAVAHGTNNAKKLMERLKRGE-KFHFIEIMACAG 450
Query: 398 GCLNGGAQIRNEKVASPKETALELE--------TILCDLAKSEPR--ENATLEHLYKAWL 447
GC+ GG Q P++ L LE DL+K R EN + +Y+ +L
Sbjct: 451 GCVGGGGQ---PITGDPEKPELTLEHRQKRAAGLYALDLSKELRRSHENKAVLQVYQEFL 507
Query: 448 GGKSTDKGKHMLNTSY 463
G + K K +L+T Y
Sbjct: 508 GEPMSKKAKEILHTHY 523
>gi|260893624|ref|YP_003239721.1| hydrogenase, Fe-only [Ammonifex degensii KC4]
gi|260865765|gb|ACX52871.1| hydrogenase, Fe-only [Ammonifex degensii KC4]
Length = 583
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 191/375 (50%), Gaps = 40/375 (10%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFS 165
A+ + TK +V+ A +++G F L K+ +RLG D V D A +
Sbjct: 218 AALADPTKHVVVQTAPAVHVTIGEMFGLPVGTDATGKIVAALRRLGFDAVFDTNFAADLT 277
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E E L+R GG P FTS PGW+ + E + E +LP++S KSPQQ+ G+++KT
Sbjct: 278 IMEEGTELLERIEKGGVLPQFTSCSPGWIKFIEHFYPE-LLPHVSTCKSPQQMFGAIVKT 336
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ A+ G++P++I V++MPC KK EA+R + GYRDVD V+T+ EL ++
Sbjct: 337 YYAQLKGINPANIVSVSIMPCTAKKFEAARPEMNAS--GYRDVDVVLTSRELGRMIKE-- 392
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES- 337
A D D P+ GTG+G G V+ A+R +L G++
Sbjct: 393 AGIDFANLPDENYDDPFG----------IGTGAGQIFGATGGVMEAALRTAYELATGKTL 442
Query: 338 PVVEFKPLRN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMAC 395
P ++F +R I+EA+ T++ +A+G N + L++KLK L Y FIE+M C
Sbjct: 443 PKLDFVEVRGMKGIKEASVELNGKTIKVLVAHGLGNARLLMEKLKAGELKDYHFIEVMTC 502
Query: 396 PSGCLNGG-------AQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLG 448
P GC+ GG +IR +++A E +L + EN ++ LY+ +LG
Sbjct: 503 PGGCIGGGGQPIPTTTEIREKRIAGIYERDK-------NLPYRKSHENPAIKKLYEEFLG 555
Query: 449 GKSTDKGKHMLNTSY 463
+ K +L+T Y
Sbjct: 556 KPLSHKSHELLHTHY 570
>gi|330836325|ref|YP_004410966.1| hydrogenase, Fe-only [Sphaerochaeta coccoides DSM 17374]
gi|329748228|gb|AEC01584.1| hydrogenase, Fe-only [Sphaerochaeta coccoides DSM 17374]
Length = 577
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 208/415 (50%), Gaps = 43/415 (10%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I+ DC C CIT + ++ + M +A +N K V+ +A
Sbjct: 182 KITDADCALCGQCITHCPVGALRERDDTQRM--------FQAIANPK-KITVIQIAPAVR 232
Query: 126 LSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
+ G L E+ V +L +++G D V D + +++E +EFL+R L+G
Sbjct: 233 AAWGEALGLPREKATVKRLVAALRKIGFDYVFDTTFSADLTIMEEGHEFLER-LAGRNDH 291
Query: 183 --PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+FTS CPGWV + + + + + +S KSPQQ+ G++ KT+ A+ LG +P+ I+ V
Sbjct: 292 PWPMFTSCCPGWVRFIKSQYPD-MTENLSTAKSPQQMFGAVAKTYYAQLLGANPADIFSV 350
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDW 299
++MPC KK EA + E +DVD V+T E+ ++ A ++ +L+EE+ D
Sbjct: 351 SIMPCVAKKSEAELPTMNDAEAA-QDVDLVLTTREIVRMIRAEKIDVKSLEEEE---FDS 406
Query: 300 PWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IR 351
P L GTG+G G V+ A+R L ++P + F+ +R D +
Sbjct: 407 P----------LGVGTGAGVIFGATGGVMEAALRSAYYLVTKKNPEADAFRDVRGMDGWK 456
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNE 409
EATF + +R + +G N + L++ ++ + YDF+E+MACP GC+ GG Q E
Sbjct: 457 EATFDIAGIPVRVAVVSGLANTRRLMEHVRSGKSSYDFVEVMACPGGCVGGGGQPIWDGE 516
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
++AS + L + +L S EN ++ Y+++ G K +L+T +H
Sbjct: 517 ELASTRADVLYGLDKVDNLRFSH--ENPSVLKAYESFFGKPLGHKCHELLHTDHH 569
>gi|295090032|emb|CBK76139.1| hydrogenases, Fe-only [Clostridium cf. saccharolyticum K10]
Length = 588
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 196/415 (47%), Gaps = 43/415 (10%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
EI +DC C CIT + + Q ++V ++ N N K V+ +A
Sbjct: 182 EIKASDCSLCGQCITHCPTGAL--QERDDVSRIFSMN----GDLNNPDKITVVQIAPAVR 235
Query: 126 LSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL---SGG 181
+ G +F LS E K L +R+G D + D + +++E E ++R
Sbjct: 236 AAWGEEFGLSREFATDKRLVAALRRMGFDYIFDTTFSADLTIMEEGTELIERLKHREEFQ 295
Query: 182 GPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV + KS + +S KSPQQ+ G++ K+ A KLGV P ++ ++
Sbjct: 296 WPMFTSCCPGWVRFL-KSQYPDMEGQLSTAKSPQQMFGAVTKSFFAAKLGVDPDNVTCIS 354
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWP 300
+MPC KK EA Y+ + +DVD V+T E+ ++ A ++ +L EE+ D P
Sbjct: 355 IMPCVAKKQEADLPTMYDGSV--KDVDYVLTTREICRLIKAEQIDVFSLPEEE---FDSP 409
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGESPVVE-FKPLRNPD-IRE 352
E TG+G G V+ A+R L G++P + F +R D +E
Sbjct: 410 LGE----------STGAGIIFGATGGVMEAALRTGYHLVMGKNPDPDAFSAVRGMDGWKE 459
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
A F G LR +A+G N + LI ++R YDF+EIMACP GC GG Q +
Sbjct: 460 AEFRLGGTVLRTAVASGLGNTRRLINAIRRGEASYDFVEIMACPGGCAGGGGQ----PIH 515
Query: 413 SPKETALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+E A L + + P EN ++ LY+A+ G + +L+T +
Sbjct: 516 DGREEAANRSETLYQMDQKNPVRFSHENHEVQGLYRAYFGKPGSHLAHRLLHTDH 570
>gi|345856533|ref|ZP_08809011.1| hydrogenase family protein [Desulfosporosinus sp. OT]
gi|344330375|gb|EGW41675.1| hydrogenase family protein [Desulfosporosinus sp. OT]
Length = 580
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 198/428 (46%), Gaps = 27/428 (6%)
Query: 45 IQDDGAYIQETNGREEKLK---KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRE 101
+Q G Y G E +K + ++ T C C C+ + +T+ ++V KV +
Sbjct: 165 VQTVGVYSAVGRGFETVVKTAFNLPLNQTACTFCGQCLAVCPTGALTEL--DQVDKVWK- 221
Query: 102 NNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGI 160
+ N+ + +V+ A ++LG +F L +V K+ +RLG D V D
Sbjct: 222 ------ALNDPNQFVVVQTAPAVRVALGEEFDLEPGTIVTGKMVAALRRLGFDRVFDTDF 275
Query: 161 AHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMG 219
A +++E E + R GG PL TS CP WV + E + +L S KSP +++G
Sbjct: 276 AADLTIMEEATELVHRIKHGGRLPLLTSCCPAWVKFFEHQFPD-LLDIPSTCKSPHEMLG 334
Query: 220 SLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVL 279
L K++ A+ LG+ P I V++MPC KK EA+R + + DVD VIT EL +
Sbjct: 335 VLTKSYYAKTLGIDPKTITVVSVMPCVAKKYEAARPEL-AQGAETADVDIVITTRELARM 393
Query: 280 LANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV 339
+ A+ KD D P E ++ +GG L A L
Sbjct: 394 IRE--ASIHFDHLKDQEFDHPLGESTGAAVIF---GATGGVLEAALRTAYEVLTGETLEK 448
Query: 340 VEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSG 398
VEF+ LR D I+EA R + +G N + +++K++ YD IEIMACP G
Sbjct: 449 VEFEALRGMDGIKEAVIPIAGRDYRIAVIHGLGNARTVLEKIQAGESNYDVIEIMACPGG 508
Query: 399 CLNGGAQIR---NEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKG 455
C+ GG Q N ++ + +A+ E L KS EN + LYK +LG K
Sbjct: 509 CIGGGGQPYHHGNMEILKARASAIYREDRAKPLRKSH--ENLAIIGLYKDFLGEPYGKKA 566
Query: 456 KHMLNTSY 463
+L+TSY
Sbjct: 567 HQLLHTSY 574
>gi|375308958|ref|ZP_09774239.1| Periplasmic hydrogenase large subunit (Fe hydrogenlyase)
[Paenibacillus sp. Aloe-11]
gi|375078267|gb|EHS56494.1| Periplasmic hydrogenase large subunit (Fe hydrogenlyase)
[Paenibacillus sp. Aloe-11]
Length = 490
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 176/355 (49%), Gaps = 31/355 (8%)
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+SL +F + + K+ +RLG D V D +++E E + R GG P
Sbjct: 129 VSLAEEFGMPFGTLTPGKMAAALRRLGFDRVYDTNFGADVTIMEEGTELIRRVTEGGPLP 188
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV +AE + + +L ++S KSP Q++G+L+KT+ A+ V P++IY V +M
Sbjct: 189 MFTSCCPAWVRFAEIEYPD-LLDHLSSCKSPMQMLGALVKTYGAQLDEVKPANIYSVAIM 247
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC K+ E R + E GYRDVD EVL ELA Q D ++ P DE
Sbjct: 248 PCTCKQFECDRPEM--EADGYRDVD--------EVLTTRELAYWIKQRGID-FMNLP-DE 295
Query: 304 HNPHRMLLVNGTGS-GGYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTC 357
+ +G G+ G V+ AIR +L E P ++ +R + IR A
Sbjct: 296 EFDSPLGKYSGAGTIFGVTGGVMEAAIRTGYELLTNEKLPKLQLDFVRGEEGIRVAEVQV 355
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ----IRNEKVAS 413
G++ L+ + G ++ L+ +++ Y FIE+M CP+GC++GG Q + +K+ +
Sbjct: 356 GELQLKVAVVAGLQHAYQLLDRVQAGECDYHFIEVMGCPAGCISGGGQPKLMLEKQKMEA 415
Query: 414 PKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ +I A S+ R EN + LY +LG H+L+T++H
Sbjct: 416 YRARK---SSIYGHDAASQVRKSHENPFIIKLYDEFLGEPLGHVSHHLLHTTFHK 467
>gi|323702078|ref|ZP_08113746.1| hydrogenase, Fe-only [Desulfotomaculum nigrificans DSM 574]
gi|333923416|ref|YP_004496996.1| hydrogenase, Fe-only [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532960|gb|EGB22831.1| hydrogenase, Fe-only [Desulfotomaculum nigrificans DSM 574]
gi|333748977|gb|AEF94084.1| hydrogenase, Fe-only [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 593
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 187/376 (49%), Gaps = 41/376 (10%)
Query: 110 NENTKTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVE 168
++ K +V+ A +++ +F L + KL +RLG D V+D +++E
Sbjct: 223 DDPNKHVVVQTAPAVRVAIAEEFGLEPGTIGTGKLVAALRRLGFDSVMDTDFTADLTIME 282
Query: 169 LENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA 227
EF+ R GG P+ TS PGW+ Y E + + +L ++S KSPQQ+ G+L+KT A
Sbjct: 283 EGTEFIKRVTEGGVLPMITSCSPGWIKYIEMYYPD-LLAHLSTCKSPQQMFGALVKTFYA 341
Query: 228 EKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATT 287
EK G+ P+ IY V++MPC KK EA R + + G++DVD V+T EL +L
Sbjct: 342 EKKGIDPASIYSVSIMPCTAKKFEAQRDELKDS--GFQDVDVVLTTRELGRML------- 392
Query: 288 TLQEEKDGILDW---PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQ----LCPGESPVV 340
++ +DW P ++++ + G V+ A+R + P +
Sbjct: 393 -----REIGIDWDNLPEEQYDDPMGISTGAAVIFGATGGVMEAAVRTVYEVITKETMPDI 447
Query: 341 EFKPLRN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
P+R I+EAT GD+ ++ +A+ N + L+ K++ Y FIEIM CP GC
Sbjct: 448 NLTPVRGMKGIKEATLKVGDLEVKVAVAHTLGNARKLLDKIRANECDYHFIEIMCCPGGC 507
Query: 400 LNGGAQ-------IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKST 452
+ GG Q +R +++A + EL + KS EN ++ +Y+ +LG
Sbjct: 508 IGGGGQPIPTNLEVRLKRIAGIYKADEELP-----IRKS--HENPAIKAIYEEFLGQPLG 560
Query: 453 DKGKHMLNTSYHNIPK 468
+K +L+T Y IP+
Sbjct: 561 EKSHKLLHTHY--IPR 574
>gi|383785983|ref|YP_005470552.1| hydrogenase, Fe-only [Fervidobacterium pennivorans DSM 9078]
gi|383108830|gb|AFG34433.1| hydrogenase, Fe-only [Fervidobacterium pennivorans DSM 9078]
Length = 588
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 195/403 (48%), Gaps = 26/403 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
TDC++C C I + ++V K++ +S E K V A +++
Sbjct: 187 TDCISCGQCANLCPVGAIYEAPDWKKVWKML--------NSKEPGKVYVAQTAPSVRVAI 238
Query: 129 GAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F + + K+ +RLG D V D A +++E E + R +GG P+FT
Sbjct: 239 GEEFGMEPGSISTGKMVAALRRLGFDYVFDTNFAADLTIMEEGYELIGRLQNGGKFPMFT 298
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV EK E + ++S KSPQQ+M S++KT+ A+K+GV P I V++MPC
Sbjct: 299 SCCPGWVNEMEKEWPE-LREHLSTAKSPQQMMSSVVKTYFAQKIGVKPEDIVMVSIMPCT 357
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLA-NELATTTLQEEKDGILDWPWDEHN 305
KK E +R + G + D VIT EL L+ + L EE+ D P
Sbjct: 358 AKKDEITRPQQLVD--GIKVTDYVITTRELGKLIKLKGIPFVNLPEEQ---YDSPLGTST 412
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRF 364
L +GG L A L + P + F+ +R D +REA L+
Sbjct: 413 GAAALF---GVTGGVMEAALRTAYEVLTGEKLPKLVFESVRGLDGVREAEIDIKGRKLKV 469
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETI 424
IA+G +++ L++++K + YDF+EIMAC GC+ GG Q ++ K+ A + TI
Sbjct: 470 AIAHGMASVKKLLREMKEGKRYYDFVEIMACLGGCIGGGGQPKSLDPDILKKRAQAIYTI 529
Query: 425 --LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
L L +S EN + LY+ +L ++ H+L+T Y +
Sbjct: 530 DELSVLRRS--HENPDIIKLYEEFLEKPNSHIAHHLLHTHYTD 570
>gi|85858940|ref|YP_461142.1| iron only hydrogenase large subunit [Syntrophus aciditrophicus SB]
gi|85722031|gb|ABC76974.1| iron only hydrogenase large subunit [Syntrophus aciditrophicus SB]
Length = 605
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 167/342 (48%), Gaps = 25/342 (7%)
Query: 70 TDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+C+ C C+ + L + +EV K +++ H +V+ A +L
Sbjct: 196 TNCVNCGQCVMACPVGALYEKDQVDEVWKALQDPTRH----------VVVQEAPAIRAAL 245
Query: 129 GAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F + +V K+ +RLG D V D +++E NE L R GG P+ T
Sbjct: 246 GEEFGMPPGSLVTGKMIAALRRLGFDKVFDTNFTADLTIIEEGNELLKRVKEGGTLPMIT 305
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ + E + + +L ++S KSPQQ+ G+L KT+ A+ G+ P++I+ V++MPC
Sbjct: 306 SCSPGWIKFCEHFYPD-LLGHLSTCKSPQQMFGALAKTYYAQVSGIDPANIFSVSIMPCT 364
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWDEHN 305
KK EA R + + GY+DVD V+T EL ++ + L +EK D P E+
Sbjct: 365 AKKYEAQRPEMKSS--GYQDVDVVLTTRELARMIKEAGIDFVNLPDEK---YDDPMGEYT 419
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDV-TLR 363
+ +GG L + E + P+R + ++ A G + ++
Sbjct: 420 GAATIF---GATGGVMEAALRTVYAVVTGEELSDLNIMPVRGLEGVKAAAVPVGALGDVK 476
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
+A+G N + L+ +++ + Y FIE+M CP GC+ GG +
Sbjct: 477 VAVAHGLGNARKLLDEIRAGKSEYAFIEVMCCPGGCVAGGGE 518
>gi|423722284|ref|ZP_17696460.1| hydrogenase, Fe-only [Parabacteroides merdae CL09T00C40]
gi|409242425|gb|EKN35187.1| hydrogenase, Fe-only [Parabacteroides merdae CL09T00C40]
Length = 596
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 190/413 (46%), Gaps = 33/413 (7%)
Query: 66 EISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+I+ + C C C++ + L + + + V+ + + + K ++ A
Sbjct: 189 DIAGSTCSYCGQCVSVCPVNALSGRNTQQPVLDALADPD----------KIVIAQTAPAV 238
Query: 125 VLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR---FLSG 180
+LG F +V K+ +RLG D V D A +++E E L R +L G
Sbjct: 239 RTALGRDFGYEPGTLVTGKMVSALRRLGFDYVFDTDFAADLTIMEEGTELLQRIGKYLKG 298
Query: 181 GG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL TS CPGWV + E+ E +L +S KSPQQ+ G++ K++ AEKLGV
Sbjct: 299 DQEVKMPLMTSCCPGWVSFVEQHFPE-LLDNLSTAKSPQQMFGAIAKSYFAEKLGVDRKR 357
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
I V++MPC KK EASR +F + G DVD I EL L+ A E D
Sbjct: 358 IVVVSIMPCLAKKYEASRPEFAVD--GNPDVDISIYTRELARLI--RYANINFAELPDSD 413
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATF 355
D P E ++ GT +GG A P ++F+ LR + IR AT
Sbjct: 414 FDRPLGESTGAGVIF--GT-TGGVIEAACRTAYELYTKKTLPKIDFEELRGLEGIRSATI 470
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE---KVA 412
++ IA+G N + L++++K PY IE+MACP GC+ GG Q + +V
Sbjct: 471 DFDGTPIKIGIAHGLGNARRLVEEVKNGMSPYHAIEVMACPGGCIGGGGQPFHRGRMEVL 530
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ AL E L KS EN ++ LY +LG + +L+T Y +
Sbjct: 531 RKRAAALYQEDRSKTLRKSH--ENPYIQALYADYLGEPCGPRAHKLLHTHYFD 581
>gi|410729200|ref|ZP_11367281.1| hydrogenase, Fe-only [Clostridium sp. Maddingley MBC34-26]
gi|410596042|gb|EKQ50729.1| hydrogenase, Fe-only [Clostridium sp. Maddingley MBC34-26]
Length = 586
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 178/345 (51%), Gaps = 41/345 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKA--SSNENTKTIVLSLAIQP 124
I +DC C CIT H V + ++ KA + ++ K V+ +A
Sbjct: 183 IENSDCALCGQCIT-----------HCPVGALRERDDTQKAFDALADSDKITVVQIAPAV 231
Query: 125 VLSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+ G F L+ E+ V +L +++G + + D + +++E +EFL++ +
Sbjct: 232 RAAWGESFGLTREEATVERLVAALRKIGFNYIFDTNFSADLTIMEEGSEFLEKINNKENN 291
Query: 183 --PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
P+FTS CPGWV + + + + + +S KSPQQ+ G++ KT+ A+ L V+PS+I+ V
Sbjct: 292 VFPMFTSCCPGWVRFLKSQYPDMV-NQLSTAKSPQQMFGAVAKTYYAKILNVNPSNIFCV 350
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDW 299
++MPC KK E S N+ +DVD V+T E++ ++ A + L+EE D
Sbjct: 351 SIMPCIAKKHE-SEISVMNDAGAGQDVDLVLTTREIDRMIRAEHIIPQNLKEEA---FDM 406
Query: 300 PWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IR 351
P L G+G+G G V+ A+R L G +P + FK +R + R
Sbjct: 407 P----------LGVGSGAGVIFGATGGVMEAALRSAYFLTTGTNPDPDAFKEIRGMNGWR 456
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACP 396
EATF ++++ I +G N + LI+++++ ++ YDF+E+MACP
Sbjct: 457 EATFEIKGISIKVAIVSGLGNTRRLIKEIRKGKVSYDFVEVMACP 501
>gi|374997756|ref|YP_004973255.1| hydrogenase, Fe-only [Desulfosporosinus orientis DSM 765]
gi|357216122|gb|AET70740.1| hydrogenase, Fe-only [Desulfosporosinus orientis DSM 765]
Length = 580
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 188/406 (46%), Gaps = 26/406 (6%)
Query: 70 TDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C C C+ + L+ ++V K + N+ + +++ A ++L
Sbjct: 193 TSCTFCGQCVAVCPTGALMELDQVDKVWKAL----------NDPNRFVIVETAPAVRVAL 242
Query: 129 GAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F L +V K+ +RLG D V D +++E E + R GG P+ T
Sbjct: 243 GEGFGLEPGTIVTGKMVAALRRLGFDRVFDTEFGADVTIMEEATELIHRLEHGGRLPILT 302
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV + E + +L S KSP +++G L K++ AE G+ P I V++MPC
Sbjct: 303 SCCPAWVKFFEHQFPD-LLDIPSTCKSPHEMLGVLSKSYYAEAYGIDPKKITVVSVMPCI 361
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA+R + + + DVD VIT EL ++ A + KD D P E
Sbjct: 362 AKKYEAARPELGQDPV-TPDVDIVITTRELSRMIRE--AGIHFEHLKDEEFDHPLGEST- 417
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFC 365
+V GT +GG L A L VEF+PLR + I+EA G+ +
Sbjct: 418 -GAAVVFGT-TGGVIEAALRTAYEWLTGHPLENVEFEPLRGMEGIKEAVIPIGERDFKIA 475
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETALELE 422
+ +G N + +++K++ YD IEIMACP GC+ GG Q N ++ + A+ E
Sbjct: 476 VTHGLGNARTILEKIQAGESHYDAIEIMACPGGCIGGGGQPYHHGNLEILQARANAIYQE 535
Query: 423 TILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
L KS EN + LY ++G DK +L+TS+ PK
Sbjct: 536 DRSKPLRKS--HENPAVIKLYNEYIGKPYGDKAHELLHTSFTQRPK 579
>gi|423345428|ref|ZP_17323117.1| hydrogenase, Fe-only [Parabacteroides merdae CL03T12C32]
gi|409223214|gb|EKN16151.1| hydrogenase, Fe-only [Parabacteroides merdae CL03T12C32]
Length = 596
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 190/413 (46%), Gaps = 33/413 (7%)
Query: 66 EISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+I+ + C C C++ + L + + + V+ + + + K ++ A
Sbjct: 189 DIAGSTCSYCGQCVSVCPVNALSGRNTQQPVLDALADPD----------KIVIAQTAPAV 238
Query: 125 VLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR---FLSG 180
+LG F +V K+ +RLG D V D A +++E E L R +L G
Sbjct: 239 RTALGRDFGYEPGTLVTGKMVSALRRLGFDYVFDTDFAADLTIMEEGTELLQRIGKYLKG 298
Query: 181 GG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL TS CPGWV + E+ E +L +S KSPQQ+ G++ K++ AEKLGV
Sbjct: 299 DQEVKMPLMTSCCPGWVSFVEQHFPE-LLDNLSTAKSPQQMFGAIAKSYFAEKLGVDRKR 357
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
I V++MPC KK EASR +F + G DVD I EL L+ A E D
Sbjct: 358 IVVVSIMPCLAKKYEASRPEFAVD--GNPDVDISIYTRELARLI--RYANINFAELPDSD 413
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATF 355
D P E ++ GT +GG A P ++F+ LR + IR AT
Sbjct: 414 FDRPLGESTGAGVIF--GT-TGGVIEAACRTAYELYTKKTLPKIDFEELRGLEGIRSATI 470
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE---KVA 412
++ IA+G N + L++++K PY IE+MACP GC+ GG Q + +V
Sbjct: 471 DFDGTPIKIGIAHGLGNARRLVEEVKNGMSPYHAIEVMACPGGCIGGGGQPFHRGRMEVL 530
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ AL E L KS EN ++ LY +LG + +L+T Y +
Sbjct: 531 RKRAAALYQEDRSKTLRKSH--ENPYIQALYADYLGEPCGPRAHKLLHTHYFD 581
>gi|83590553|ref|YP_430562.1| Iron hydrogenase, small subunit [Moorella thermoacetica ATCC 39073]
gi|83573467|gb|ABC20019.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Moorella
thermoacetica ATCC 39073]
Length = 573
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 192/375 (51%), Gaps = 42/375 (11%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFS 165
A+ + K +V+ A +S+G +F L+ + ++ +RLG D V D + +
Sbjct: 217 AALADPEKFVVVQTAPATRVSIGQEFGLAPGSINTGQMVAALRRLGFDRVFDTDFSADLT 276
Query: 166 LVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
++E +EF++RF G PL TS PGW+ + E + E I P +S KSPQQ+ G++ KT
Sbjct: 277 IMEEGSEFIERFTKDGPLPLITSCSPGWIKFMEHFYPELI-PNVSTCKSPQQMFGAVAKT 335
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE- 283
+ A K GV P+ + V++MPC KK E R + + GY+DVD V+T EL ++
Sbjct: 336 YYARKAGVDPARMVVVSIMPCTAKKFECQRPEMRDS--GYQDVDYVLTTRELARMIREAG 393
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES 337
+ L EE+ D P E TG+G G V+ A+R +L GE+
Sbjct: 394 IDFKNLPEEQ---YDDPLGE----------STGAGVIFGATGGVMEAALRTAYELITGET 440
Query: 338 -PVVEFKPLRN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMAC 395
P ++F +R I+EAT +R +A+ + + L++++K Y FIEIM C
Sbjct: 441 LPALDFYDIRGLKGIKEATVDIKGTKVRVAVAHSLGHARQLLERVKAGE-QYHFIEIMCC 499
Query: 396 PSGCLNGGAQ-------IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLG 448
P GC+ GG Q IR +++ + +E+ + KS EN +++ LY+ +LG
Sbjct: 500 PGGCIGGGGQPIPTNTEIREQRIKGIYQVDMEM-----PIRKSH--ENPSVQALYREFLG 552
Query: 449 GKSTDKGKHMLNTSY 463
++K H+L+T Y
Sbjct: 553 KPLSEKSHHLLHTEY 567
>gi|373496024|ref|ZP_09586572.1| hydrogenase, Fe-only [Fusobacterium sp. 12_1B]
gi|371965935|gb|EHO83427.1| hydrogenase, Fe-only [Fusobacterium sp. 12_1B]
Length = 680
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 199/414 (48%), Gaps = 35/414 (8%)
Query: 72 CLACSGCITSAESVLITQQ-SHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + IT++ ++++ + ++ + K ++ S + ++LG
Sbjct: 58 CINCGQCANVCPASSITEKYEYQQIAEAVKNKD----------KIVIFSTSPSVRVALGE 107
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTS 187
+F + +V K+ + LG + +LD A ++VE +E + R +G PL FTS
Sbjct: 108 EFGMEKGSLVEGKMVSLLRALGGNYILDTNFAADLTIVEEASELIQRITTGSKPLPQFTS 167
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV YAE H E ILP +S KSP + G IKT+ A+K+ + I +V + PC
Sbjct: 168 CCPAWVKYAEIYHPE-ILPNLSTAKSPIGMQGPTIKTYFAKKMNIDLEKIVNVAVTPCTA 226
Query: 248 KKLEASRADFYN--EELG---YRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E R + + ++LG RD+D VIT EL L A E A + ++ D
Sbjct: 227 KKFEIRRDEMKDAGKKLGIEDMRDMDYVITTREL-ALWAKE-AGVDFKALEESSFDKVMG 284
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRN-PDIREATFTCGD 359
E ++ N +GG L A + ++P + E K +R I+EA GD
Sbjct: 285 ESTGAGIIFGN---TGGVMEAALRTAYEYVTHEKAPADLFELKEVRGMKGIKEAGIKVGD 341
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN-----EKVASP 414
+T+ + G N +I+K+K Y FIE+M CP GC+ GG Q ++ +++
Sbjct: 342 LTVNVAVIYGTENADKVIEKVKNGEKSYHFIEVMTCPGGCIGGGGQPKDLDAERDEINQK 401
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
+ +L + L + S EN+ + LYK + G ++ + ML+T Y++ K
Sbjct: 402 RIDSLYKKDTLTPIRSS--HENSEIIALYKEFYGHPLSELAEEMLHTQYYDRSK 453
>gi|390453547|ref|ZP_10239075.1| NADH:ubiquinone oxidoreductase subunit [Paenibacillus peoriae KCTC
3763]
Length = 446
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 175/355 (49%), Gaps = 31/355 (8%)
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+SL +F + + K+ +RLG D V D +++E E + R GG P
Sbjct: 85 VSLAEEFGMPFGTLTPGKMAAALRRLGFDRVYDTNFGADVTIMEEGTELIRRVTEGGPLP 144
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV +AE + + +L ++S KSP Q++G+L+KT+ A+ V P++IY V +M
Sbjct: 145 MFTSCCPAWVRFAEIEYPD-LLDHLSSCKSPMQILGALVKTYGAQLDEVKPANIYSVAIM 203
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC K+ E R + E GYRDVD EVL ELA Q D ++ P DE
Sbjct: 204 PCTCKQFECDRPEM--ESDGYRDVD--------EVLTTRELAYWIKQRGID-FMNLP-DE 251
Query: 304 HNPHRMLLVNGTGS-GGYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTC 357
+ +G G+ G V+ AIR +L E P ++ +R + IR A
Sbjct: 252 EFDSPLGQYSGAGTIFGVTGGVMEAAIRTGYELLTNEKLPKLQLDFVRGEEGIRVAEVQV 311
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ----IRNEKVAS 413
G++ L+ + G ++ L+ +++ Y FIE+M CP+GC++GG Q + +K+ +
Sbjct: 312 GELQLKVAVVAGLQHAYQLLDRVQAGECDYHFIEVMGCPAGCISGGGQPKLMLEKQKIEA 371
Query: 414 PKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ +I A S+ R EN + LY +LG H+L+T++
Sbjct: 372 YRARK---SSIYGHDAASQVRKSHENPFIIKLYDEFLGEPLGHVSHHLLHTTFQK 423
>gi|154495355|ref|ZP_02034360.1| hypothetical protein PARMER_04412 [Parabacteroides merdae ATCC
43184]
gi|154085279|gb|EDN84324.1| hydrogenase, Fe-only [Parabacteroides merdae ATCC 43184]
Length = 601
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 190/413 (46%), Gaps = 33/413 (7%)
Query: 66 EISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+I+ + C C C++ + L + + + V+ + + + K ++ A
Sbjct: 194 DIAGSTCSYCGQCVSVCPVNALSGRNTQQPVLDALADPD----------KIVIAQTAPAV 243
Query: 125 VLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR---FLSG 180
+LG F +V K+ +RLG D V D A +++E E L R +L G
Sbjct: 244 RTALGRDFGYEPGTLVTGKMVSALRRLGFDYVFDTDFAADLTIMEEGTELLQRIGKYLKG 303
Query: 181 GG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL TS CPGWV + E+ E +L +S KSPQQ+ G++ K++ AEKLGV
Sbjct: 304 DQEVKMPLMTSCCPGWVSFVEQHFPE-LLDNLSTAKSPQQMFGAIAKSYFAEKLGVDRKR 362
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
I V++MPC KK EASR +F + G DVD I EL L+ A E D
Sbjct: 363 IVVVSIMPCLAKKYEASRPEFAVD--GNPDVDISIYTRELARLI--RYANINFAELPDSD 418
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATF 355
D P E ++ GT +GG A P ++F+ LR + IR AT
Sbjct: 419 FDRPLGESTGAGVIF--GT-TGGVIEAACRTAYELYTKKTLPKIDFEELRGLEGIRSATI 475
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE---KVA 412
++ IA+G N + L++++K PY IE+MACP GC+ GG Q + +V
Sbjct: 476 DFDGTPIKIGIAHGLGNARRLVEEVKNGMSPYHAIEVMACPGGCIGGGGQPFHRGRMEVL 535
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ AL E L KS EN ++ LY +LG + +L+T Y +
Sbjct: 536 RKRAAALYQEDRSKTLRKSH--ENPYIQALYADYLGEPCGPRAHKLLHTHYFD 586
>gi|389843333|ref|YP_006345413.1| hydrogenase, Fe-only [Mesotoga prima MesG1.Ag.4.2]
gi|387858079|gb|AFK06170.1| hydrogenase, Fe-only [Mesotoga prima MesG1.Ag.4.2]
Length = 586
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 190/413 (46%), Gaps = 30/413 (7%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I+ TDC+ C C IT++ E +V+ E H K ++ A +
Sbjct: 184 IAATDCINCGQCSAVCPVGAITERM--EFREVVAELRKHD-------KVLIAQTAPSVRV 234
Query: 127 SLGAKFA-LSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
+L +F L K+ ++LG D V D +++E +E L+R GG P+
Sbjct: 235 ALSEEFGELPGTVSTGKMVAALRKLGFDYVFDTNFTADLTIMEEGSELLERVKEGGKFPM 294
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGWV EK + EF +S KSPQ++M +L+KT+ AEK+G P IY V++MP
Sbjct: 295 FTSCCPGWVNMMEKLYPEFT-ENLSTAKSPQEMMSALVKTYFAEKIGKRPEDIYLVSIMP 353
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWPWDE 303
C KK E R G R D V+ EL L+ +++ +L+EE+ D P
Sbjct: 354 CTAKKDEKGRDTLTVR--GTRSTDAVLVTRELGKLIKMHKIPFESLEEEE---FDSPLGI 408
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTL 362
++ +GG L A E P ++F R D ++EA +
Sbjct: 409 STGAAVIF---GATGGVMEAALRTAYELHTGEELPRLDFDFARGFDGVKEAEIDMKGTKV 465
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELE 422
R + +G N+ L+ K++ Y F+E+MACP GC+ GG Q K + P +E
Sbjct: 466 RVAVVHGGSNVVKLMDKIRSGEAFYHFVEVMACPGGCIGGGGQ---PKSSQPGYLQKRME 522
Query: 423 TILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNI 471
I ++ KS + EN + LY+ +LG +L+T Y + K+ I
Sbjct: 523 AIY-NIDKSSVIRKSHENPAIAKLYEEYLGKPLGHLSHELLHTHYKDNKKSVI 574
>gi|159470457|ref|XP_001693376.1| iron hydrogenase [Chlamydomonas reinhardtii]
gi|9837540|gb|AAG00591.1|AF289201_1 Fe-hydrogenase precursor [Chlamydomonas reinhardtii]
gi|16945126|emb|CAC80065.1| Fe-hydrogenase [Chlamydomonas reinhardtii]
gi|18026270|gb|AAL23572.1| iron-hydrogenase HydA1 [Chlamydomonas reinhardtii]
gi|40736851|emb|CAC83731.1| Fe-hydrogenase [Chlamydomonas reinhardtii]
gi|158277634|gb|EDP03402.1| iron hydrogenase [Chlamydomonas reinhardtii]
Length = 497
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 163/383 (42%), Gaps = 72/383 (18%)
Query: 142 KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL---------SGGGPLFTSECPGW 192
+L +RLG D V D +++E +E L R P+FTS CPGW
Sbjct: 114 QLAEGLRRLGFDEVFDTLFGADLTIMEEGSELLHRLTEHLEAHPHSDEPLPMFTSCCPGW 173
Query: 193 VCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEA 252
+ EKS+ + I PY+S KSPQ ++ +++K++LAEK G+ P + V++MPC K+ EA
Sbjct: 174 IAMLEKSYPDLI-PYVSSCKSPQMMLAAMVKSYLAEKKGIAPKDMVMVSIMPCTRKQSEA 232
Query: 253 SRADF-YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLL 311
R F + + R +D VIT VEL + L E +G WD NP M +
Sbjct: 233 DRDWFCVDADPTLRQLDHVITTVELGNIFKER--GINLAELPEG----EWD--NP--MGV 282
Query: 312 VNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTC-------- 357
+G G +GG L A P + +R D I+E T
Sbjct: 283 GSGAGVLFGTTGGVMEAALRTAYELFTGTPLPRLSLSEVRGMDGIKETNITMVPAPGSKF 342
Query: 358 -------------------------------------GDVTLRFCIANGFRNIQNLIQKL 380
G +TLR +ANG N + LI K+
Sbjct: 343 EELLKHRAAARAEAAAHGTPGPLAWDGGAGFTSEDGRGGITLRVAVANGLGNAKKLITKM 402
Query: 381 KRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLE 440
+ YDF+EIMACP+GC+ GG Q R+ A ++ L + EN ++
Sbjct: 403 QAGEAKYDFVEIMACPAGCVGGGGQPRSTDKAITQKRQAALYNLDEKSTLRRSHENPSIR 462
Query: 441 HLYKAWLGGKSTDKGKHMLNTSY 463
LY +LG K +L+T Y
Sbjct: 463 ELYDTYLGEPLGHKAHELLHTHY 485
>gi|310826467|ref|YP_003958824.1| hydrogenase [Eubacterium limosum KIST612]
gi|308738201|gb|ADO35861.1| hydrogenase [Eubacterium limosum KIST612]
Length = 583
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 194/419 (46%), Gaps = 41/419 (9%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I+ C+ C CI + + ++S + N + + TKT+V+ A
Sbjct: 188 IAEVGCINCGQCIVNCPVGALKEKS---------DINRVWDALGDPTKTVVVQSAPAVRA 238
Query: 127 SLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
+LG +F L V KL +RL D V D +++E E ++R +GG P+
Sbjct: 239 ALGEEFNLPMGTNVTGKLAAALRRLNFDGVFDTDFGADVTIMEEGTELINRVKNGGVLPM 298
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS PGW+ E + E I P++S KSPQ + G+L+K+H AE G+ P + V++MP
Sbjct: 299 ITSCSPGWIKMIETYYPEMI-PHLSSCKSPQNMTGALLKSHYAEMNGIDPKDLVVVSVMP 357
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW--- 301
C KK E R + + G +DVD IT EL ++ K+ LD+P
Sbjct: 358 CTAKKYEVQRDELSVD--GNQDVDISITTRELARMI------------KEARLDFPALPD 403
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQ----LCPGESPVVEFKPLRNPD-IREATF- 355
+E +P+ G V+ A+R L + ++++ +R D ++ A
Sbjct: 404 EEFDPYYGDYSGAAVIFGATGGVMEAAVRTVADVLNDKDIQKIDYEAVRGVDGLKTAEVE 463
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQ-----IRNE 409
D+T++ +A+G NI+ +++ +K Y FIE+MACP GC+NGG Q R
Sbjct: 464 VTPDLTVKVAVASGGSNIRKVMEGIKNGEYKDYHFIELMACPGGCVNGGGQPIISAKRKM 523
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
+V E A L + + +N ++ +Y+ +LG K +L+T+Y K
Sbjct: 524 EVDIRAERAKALYSEDASKKYRKSHQNPSVIRIYEEFLGEPGGHKAHELLHTTYSQKAK 582
>gi|18073435|emb|CAC83291.1| Fe-hydrogenase ['Chlorella' fusca]
gi|21732235|emb|CAC83290.1| Fe-hydrogenase ['Chlorella' fusca]
Length = 436
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 178/389 (45%), Gaps = 42/389 (10%)
Query: 107 ASSNENTKTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFS 165
A E+ + ++ +A +++ L+ V + +L + LG D V D +
Sbjct: 49 AKPKESRRLMIAQIASAVRVAIAETIGLAPGDVTIGQLVTGLRMLGFDYVFDTLFGADLT 108
Query: 166 LVELENEFLDRFLSG---------GGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQ 216
++E E L R P+FTS CPGWV EKS+ E I PY+S KSPQ
Sbjct: 109 IMEEGTELLHRLQDHLEQHPNKEEPLPMFTSCCPGWVAMVEKSNPELI-PYLSSCKSPQM 167
Query: 217 VMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGY-RDVDCVITAVE 275
++G++IK + A+++GV PS I +V++MPC K+ EA R F G RDVD V+T E
Sbjct: 168 MLGAVIKNYYAQQVGVQPSDICNVSVMPCVRKQGEADREWFNTTGAGLARDVDHVVTTAE 227
Query: 276 L-EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCP 334
+ ++ L + L E D P E +L G A + + Q
Sbjct: 228 VGKIFLERGIKLNELPESN---FDNPIGEGTGGALLFGTTGGVMEAALRTVYEVVTQKPM 284
Query: 335 GESPVVEFKPLRNPDIREATFTCGD--------------VTLRFCIANGFRNIQNLIQKL 380
G E + L E T GD +TL+ +ANG N + LI+ L
Sbjct: 285 GRVDFEEVRGLEGIKEAEITLKPGDDSPFKAFAGADGQGITLKIAVANGLGNAKKLIKSL 344
Query: 381 KRKRLPYDFIEIMACPSGCLNGGAQIR--NEKVASPKETAL----ELETILCDLAKSEPR 434
+ YDFIE+MACP GC+ GG Q R ++++ ++ A+ E TI
Sbjct: 345 SEGKAKYDFIEVMACPGGCIGGGGQPRSTDKQILQKRQQAMYNLDERSTI------RRSH 398
Query: 435 ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+N ++ LY +LG ++ K +L+T Y
Sbjct: 399 DNPFIQALYDKFLGAPNSHKAHDLLHTHY 427
>gi|406982905|gb|EKE04167.1| hypothetical protein ACD_20C00099G0012 [uncultured bacterium]
Length = 588
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 190/402 (47%), Gaps = 31/402 (7%)
Query: 71 DCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
DC+ C C++ + +T +S + N A +E K ++ +A ++LG
Sbjct: 193 DCVYCGQCVSVCPTGALTIKSEID--------NTWNAIFDEK-KFVIAQIAPAVRVALGE 243
Query: 131 KFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
F L + + K++G + V D A +++E EF+ R +G PLFTS
Sbjct: 244 AFGLKPGVNTIGLIVAALKKIGFNQVFDTSFAADMTVMEETAEFITRLQNGEKLPLFTSC 303
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP WV +AE H E +L +S KSPQQ+ GS+ K +L ++ + P ++ V++MPC K
Sbjct: 304 CPAWVRFAELKHPE-LLDNLSTCKSPQQMFGSIAKKYLTKEYNIEPENLTVVSIMPCTAK 362
Query: 249 KLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHR 308
K EA R +F E G +DVD V+T EL ++ A L + LD P+
Sbjct: 363 KAEAQRDEF--AENGIQDVDIVLTTQELIRMIKE--AGIDLNNIEPEELDTPFG------ 412
Query: 309 MLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTL 362
++ G G SGG A V+ A + + R D ++E T +
Sbjct: 413 --ILTGAGVIFGSSGGVAEAVVRTAYEMVTGNALEKFDITEARGLDKLKELTVDIDGTKV 470
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALE-L 421
R I NG + NL+ K+ + YD +E+MACP GC+ GG Q ++ K + K + E L
Sbjct: 471 RIAIVNGLQEASNLVDKINKGEAHYDIVEVMACPGGCIGGGGQSQSCKDCTIKSSRSEGL 530
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+L + EN +++LYK L ++ +L+T Y
Sbjct: 531 YKADKELPIHKSHENPEVQNLYKKLLQSPNSKISHKLLHTRY 572
>gi|256839950|ref|ZP_05545459.1| NADH:ubiquinone oxidoreductase subunit [Parabacteroides sp. D13]
gi|256738880|gb|EEU52205.1| NADH:ubiquinone oxidoreductase subunit [Parabacteroides sp. D13]
Length = 596
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 172/363 (47%), Gaps = 22/363 (6%)
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
TK ++ A +LG F +V K+ ++LG D V D A +++E
Sbjct: 227 TKIVIAQTAPAVRTALGRDFGYEPGTLVTGKMVSALRQLGFDYVFDTDFAADLTIMEEGT 286
Query: 172 EFLDR---FLSGGG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
E L R +L+G PL TS CPGWV + E+ E + ++S KSPQQ+ G++ K+
Sbjct: 287 ELLHRLGSYLNGDKEVKIPLMTSCCPGWVSFVEQHFPE-LRDHLSTAKSPQQMFGAIAKS 345
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEKLGV + V++MPC KK EASR +F E G DVD I EL L+
Sbjct: 346 YFAEKLGVDRKDLVVVSIMPCLAKKYEASRPEFSVE--GNPDVDYSIYTRELARLI--RY 401
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKP 344
A E DG D P E ++ GT +GG A V+F+
Sbjct: 402 ANIDFNELPDGEFDRPLGESTGASVIF--GT-TGGVIEAACRTAYELYTKKNLDKVDFEE 458
Query: 345 LRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGG 403
LR + IR AT ++ IA+G N + LI+++K PY IE+MACP GC+ GG
Sbjct: 459 LRGLEGIRSATIDFNGTPVKIGIAHGLGNARKLIEEVKNGTSPYHAIEVMACPGGCIGGG 518
Query: 404 AQIRNE---KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
Q + +V + AL E L KS EN ++ LY +LG K +L+
Sbjct: 519 GQPFHRGRMEVLRRRAAALYREDANKPLRKSH--ENPYIQQLYSEYLGEPCGPKAHKLLH 576
Query: 461 TSY 463
T Y
Sbjct: 577 THY 579
>gi|310642488|ref|YP_003947246.1| hydrogenase, fe-only [Paenibacillus polymyxa SC2]
gi|309247438|gb|ADO57005.1| Hydrogenase, Fe-only [Paenibacillus polymyxa SC2]
Length = 446
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 176/355 (49%), Gaps = 31/355 (8%)
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+SL +F + + K+ +RLG D V D +++E E + R GG P
Sbjct: 85 VSLAEEFGMPFGTLTPGKMAAALRRLGFDRVYDTNFGADVTIMEEGTELIRRVTEGGPLP 144
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV +AE + + +L ++S KSP Q++G+L+KT+ A+ V P++IY V +M
Sbjct: 145 MFTSCCPAWVRFAEIEYPD-LLDHLSSCKSPMQMVGALVKTYGAQLDEVEPANIYSVAIM 203
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC K+ E R + E GYRDVD EVL ELA Q+ D ++ P DE
Sbjct: 204 PCTCKQFECDRPEM--ESDGYRDVD--------EVLTTRELAYWIKQQGID-FMNLP-DE 251
Query: 304 HNPHRMLLVNGTGS-GGYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTC 357
+ +G G+ G V+ AIR +L E P ++ +R + IR A
Sbjct: 252 EFDAPLGQYSGAGTIFGVTGGVMEAAIRTGYELLTNEKLPKLQLDFVRGEEGIRVAEVQV 311
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ----IRNEKVAS 413
G++ L+ + G ++ L+ +++ Y FIE+M CP+GC++GG Q + +K+ +
Sbjct: 312 GELQLKVAVVAGLQHAYQLLDRVQAGECDYHFIEVMGCPAGCISGGGQPKLMLEKQKIEA 371
Query: 414 PKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ +I A S+ R EN + LY +LG H+L+T++
Sbjct: 372 YRARK---SSIYGHDAASQVRKSHENPFIIKLYDEFLGEPLGHVSHHLLHTTFQK 423
>gi|39933211|ref|NP_945487.1| hydrogenase gamma-fused hydrogenase large and small subunit
[Rhodopseudomonas palustris CGA009]
gi|39652836|emb|CAE25578.1| hydrogenase gamma-fused hydrogenase large and small subunit
[Rhodopseudomonas palustris CGA009]
Length = 619
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 177/362 (48%), Gaps = 31/362 (8%)
Query: 117 VLSLAIQPVLSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
V+ A ++ G +F L + V ++ ++LGVD+VLD A ++E E L
Sbjct: 249 VVQFAPAVRVAFGEEFGLPAGTNVEGQIIAACRKLGVDVVLDTNFAADVVIMEEGAELLA 308
Query: 176 RFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
R G P FTS CP W+ +AE H +LP +S KSPQQV+ ++ K++L +LGV
Sbjct: 309 RLKQGRRPTFTSCCPAWINFAE-IHYPDVLPLLSSTKSPQQVLSTIAKSYLPAQLGVPAE 367
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
I +++MPC KK EA R ++ G + D V+T E L L+ E
Sbjct: 368 RIRVISIMPCIAKKDEAVRPQMVHD--GQPETDLVLTTREFARL---------LRREGID 416
Query: 296 ILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCP----GESPVVEFKPLRNP 348
+ D P + + R L +G+G G V+ A+R + E +E LR
Sbjct: 417 LKDLPSSQFD--RPFLSAYSGAGAIFGTTGGVMEAAVRTIYALVNGRELERIELTQLRGF 474
Query: 349 D-IREATFTCGDVT--LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
+ +REAT G ++ + +G + + L++ + YDFIE+MACP GC++GG
Sbjct: 475 EGLREATVDLGAPVGEVKVAMVHGLGDTRKLVESVLSGEANYDFIEVMACPGGCVDGGGS 534
Query: 406 IRNEKVASPKETALELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
+R++K P AL+ + ++ ++ + N ++ LY+ L +++ +L+T
Sbjct: 535 LRSKKAYLP--LALKRRETIYNVDRAAKVRQSHNNPQVQALYRELLQAPNSEIAHRLLHT 592
Query: 462 SY 463
Y
Sbjct: 593 HY 594
>gi|317471698|ref|ZP_07931039.1| iron only hydrogenase large subunit domain-containing protein
[Anaerostipes sp. 3_2_56FAA]
gi|316900802|gb|EFV22775.1| iron only hydrogenase large subunit domain-containing protein
[Anaerostipes sp. 3_2_56FAA]
Length = 561
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 169/350 (48%), Gaps = 34/350 (9%)
Query: 66 EISLTDCLACSGCITSAESVLIT-QQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+++ TDC+ C C + IT +Q E V + + ++ K +V+ +A
Sbjct: 182 DLAQTDCVGCGQCRAVCPTGAITIKQDIERVWEAL----------SDPEKRVVVQIAPAV 231
Query: 125 VLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+++G KF + E V+ +L +R+G D V D +++E E ++R SG
Sbjct: 232 RVAVGDKFGIPKGENVLGRLVAALRRIGFDEVYDTNFGADLTVMEESKELVERLESGDNL 291
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH-IYHVT 241
PLFTS CP WV + E + +F IS +SPQ++ G+LIK A GV S V+
Sbjct: 292 PLFTSCCPAWVKFCENRYPQF-RKNISTCRSPQEMFGALIKEE-ARMGGVDDSRKTVVVS 349
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK E +R + +NE G ++VD V+T E ++ E Q E + LD P+
Sbjct: 350 IMPCTAKKAEITRPEHFNE--GEQNVDYVLTTTEASRMI-QESGIDLTQVEPEA-LDMPF 405
Query: 302 DEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATF 355
+ +G G +GG VL + + + F +R D I+EA+
Sbjct: 406 G--------ISSGAGAIFGVTGGVTEAVLRRLMNSDRAEDLEAISFTGVRGVDGIKEASV 457
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
GD ++ + NG + ++ KL + YDF+E+MAC GC+ GG Q
Sbjct: 458 KLGDRDVKIAVVNGLKCASEVLDKLDAGEIYYDFVEVMACKRGCITGGGQ 507
>gi|374324426|ref|YP_005077555.1| Periplasmic [Fe] hydrogenase large subunit (Fe hydrogenlyase)
[Paenibacillus terrae HPL-003]
gi|357203435|gb|AET61332.1| Periplasmic [Fe] hydrogenase large subunit (Fe hydrogenlyase)
[Paenibacillus terrae HPL-003]
Length = 446
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 172/352 (48%), Gaps = 25/352 (7%)
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+S+ +F + + K+ +RLG D V D +++E E + R GG P
Sbjct: 85 VSIAEEFGMPFGTLTPGKMAAALRRLGFDRVYDTNFGADVTIMEEGTELIRRVTEGGPLP 144
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV +AE + + +L ++S KSP Q++G+L+KT+ A+ V P++IY V +M
Sbjct: 145 MFTSCCPAWVRFAEIEYPD-LLDHLSSCKSPMQMLGALVKTYGAQLDEVEPANIYSVAIM 203
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC K+ E R + E GYRDVD EVL ELA ++E + P DE
Sbjct: 204 PCTCKQFECDRPEM--EADGYRDVD--------EVLTTRELA-YWIKESGIDFMSLP-DE 251
Query: 304 HNPHRMLLVNGTGS-GGYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTC 357
+ +G GS G V+ AIR +L E P ++ +R + IR A
Sbjct: 252 EFDSPLGRYSGAGSIFGVTGGVMEAAIRTGYELLTNEKLPKLQLDFVRGEEGIRVAEVQV 311
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ----IRNEKVAS 413
G++ L+ + G ++ L+ +++ Y FIE+M CP+GC++GG Q + +K+ +
Sbjct: 312 GELQLKVAVVAGLQHAYGLLDRVQAGECDYHFIEVMGCPAGCISGGGQPKLMLEKQKIEA 371
Query: 414 PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ + L + EN + LY +LG H+L+T++
Sbjct: 372 YRARKSSIYGHDAGLQVRKSHENPHIIKLYDEFLGEPLGHVSHHLLHTTFQK 423
>gi|386041555|ref|YP_005960509.1| NADH:ubiquinone oxidoreductase subunit [Paenibacillus polymyxa M1]
gi|343097593|emb|CCC85802.1| NADH:ubiquinone oxidoreductase subunit [Paenibacillus polymyxa M1]
Length = 500
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 176/355 (49%), Gaps = 31/355 (8%)
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+SL +F + + K+ +RLG D V D +++E E + R GG P
Sbjct: 139 VSLAEEFGMPFGTLTPGKMAAALRRLGFDRVYDTNFGADVTIMEEGTELIRRVTEGGPLP 198
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV +AE + + +L ++S KSP Q++G+L+KT+ A+ V P++IY V +M
Sbjct: 199 MFTSCCPAWVRFAEIEYPD-LLDHLSSCKSPMQMVGALVKTYGAQLDEVEPANIYSVAIM 257
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC K+ E R + E GYRDVD EVL ELA Q+ D ++ P DE
Sbjct: 258 PCTCKQFECDRPEM--ESDGYRDVD--------EVLTTRELAYWIKQQGID-FMNLP-DE 305
Query: 304 HNPHRMLLVNGTGS-GGYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTC 357
+ +G G+ G V+ AIR +L E P ++ +R + IR A
Sbjct: 306 EFDAPLGQYSGAGTIFGVTGGVMEAAIRTGYELLTNEKLPKLQLDFVRGEEGIRVAEVQV 365
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ----IRNEKVAS 413
G++ L+ + G ++ L+ +++ Y FIE+M CP+GC++GG Q + +K+ +
Sbjct: 366 GELQLKVAVVAGLQHAYQLLDRVQAGECDYHFIEVMGCPAGCISGGGQPKLMLEKQKIEA 425
Query: 414 PKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ +I A S+ R EN + LY +LG H+L+T++
Sbjct: 426 YRARK---SSIYGHDAASQVRKSHENPFIIKLYDEFLGEPLGHVSHHLLHTTFQK 477
>gi|150388476|ref|YP_001318525.1| hydrogenase, Fe-only [Alkaliphilus metalliredigens QYMF]
gi|149948338|gb|ABR46866.1| hydrogenase, Fe-only [Alkaliphilus metalliredigens QYMF]
Length = 582
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 197/411 (47%), Gaps = 32/411 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C C C+ + +T+ +H +V K + + + K +V+ A ++L
Sbjct: 195 TSCTYCGQCVAVCPTAALTEVNHTRKVWKALHDPD----------KYVVVQTAPAIRVAL 244
Query: 129 GAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + + V KL +RLG D V D +++E E +DR +GG P+ T
Sbjct: 245 GELFGMEAGSLVTGKLAASLRRLGFDQVYDTDFGADVTIMEEAKELIDRLENGGRLPMLT 304
Query: 187 SECPGWVCYAEKSHGEFI-LPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
S CP WV + E + + +P S KSP + G++ KT+LAEK+G+ P + V++MPC
Sbjct: 305 SCCPAWVSFIEHQFPDMVDIP--SSCKSPHIMFGTIAKTYLAEKMGIDPKKMVVVSIMPC 362
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA+R + ++ + +VD VIT EL +L A + D D P E
Sbjct: 363 VAKKAEAARTELSIDD--HDNVDIVITTRELGDMLKE--AGIDFDKLADEDYDHPLGEST 418
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRF 364
++ GT +GG + A + E VEF LR D +REAT ++
Sbjct: 419 GASVIF--GT-TGGVIEAAMRTAYEWITGEELEQVEFHQLRGMDGLREATVDLKGREIKI 475
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ---IRNEKVASPKETALEL 421
IA+G N + L++ ++ + Y IEIMACP GC+ GG Q N++V ++ +L
Sbjct: 476 GIAHGLGNARQLLEDIRNGKSEYHAIEIMACPGGCIGGGGQPYHYGNDEVVKARQRSLYK 535
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKH-MLNTSYHNIPKNNI 471
E + KS EN + +Y+ +LG + H +L+T Y PK I
Sbjct: 536 EDQGKKIRKS--HENPEVIKMYEEYLGEPFYGELAHKLLHTKY--TPKERI 582
>gi|295321929|pdb|3LX4|A Chain A, Stepwise [fefe]-Hydrogenase H-Cluster Assembly Revealed In
The Structure Of Hyda(Deltaefg)
gi|295321930|pdb|3LX4|B Chain B, Stepwise [fefe]-Hydrogenase H-Cluster Assembly Revealed In
The Structure Of Hyda(Deltaefg)
Length = 457
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 163/383 (42%), Gaps = 72/383 (18%)
Query: 142 KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL---------SGGGPLFTSECPGW 192
+L +RLG D V D +++E +E L R P+FTS CPGW
Sbjct: 74 QLAEGLRRLGFDEVFDTLFGADLTIMEEGSELLHRLTEHLEAHPHSDEPLPMFTSCCPGW 133
Query: 193 VCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEA 252
+ EKS+ + I PY+S KSPQ ++ +++K++LAEK G+ P + V++MPC K+ EA
Sbjct: 134 IAMLEKSYPDLI-PYVSSCKSPQMMLAAMVKSYLAEKKGIAPKDMVMVSIMPCTRKQSEA 192
Query: 253 SRADF-YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLL 311
R F + + R +D VIT VEL + L E +G WD NP M +
Sbjct: 193 DRDWFCVDADPTLRQLDHVITTVELGNIFKER--GINLAELPEG----EWD--NP--MGV 242
Query: 312 VNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTC-------- 357
+G G +GG L A P + +R D I+E T
Sbjct: 243 GSGAGVLFGTTGGVMEAALRTAYELFTGTPLPRLSLSEVRGMDGIKETNITMVPAPGSKF 302
Query: 358 -------------------------------------GDVTLRFCIANGFRNIQNLIQKL 380
G +TLR +ANG N + LI K+
Sbjct: 303 EELLKHRAAARAEAAAHGTPGPLAWDGGAGFTSEDGRGGITLRVAVANGLGNAKKLITKM 362
Query: 381 KRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLE 440
+ YDF+EIMACP+GC+ GG Q R+ A ++ L + EN ++
Sbjct: 363 QAGEAKYDFVEIMACPAGCVGGGGQPRSTDKAITQKRQAALYNLDEKSTLRRSHENPSIR 422
Query: 441 HLYKAWLGGKSTDKGKHMLNTSY 463
LY +LG K +L+T Y
Sbjct: 423 ELYDTYLGEPLGHKAHELLHTHY 445
>gi|167623339|ref|YP_001673633.1| hydrogenase, Fe-only [Shewanella halifaxensis HAW-EB4]
gi|167353361|gb|ABZ75974.1| hydrogenase, Fe-only [Shewanella halifaxensis HAW-EB4]
Length = 410
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 184/367 (50%), Gaps = 44/367 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTI-VLSLAIQPV 125
I+ CL+C C+ + I + +H + VI + ++++ K + +++ A++
Sbjct: 47 INKEKCLSCGQCLINCPFGAIIE-THSALETVIAK------LADKDVKVVGIIAPAVR-- 97
Query: 126 LSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS----- 179
+++G +F L + E V KL G + G + D A +++E +EF+ R +
Sbjct: 98 VAIGEEFGLGTGELVTGKLYGAMNKAGFK-IFDCNFAADLTIMEEGSEFIHRLHANVKGE 156
Query: 180 ---GGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
G P FTS CPGWV Y E ++ +LP +S KSPQQ+ G++ KT+ A+ + P +
Sbjct: 157 ADAGALPQFTSCCPGWVRYLETNYPS-LLPNLSTAKSPQQMAGTVAKTYGAKVYAMQPEN 215
Query: 237 IYHVTLMPCYDKKLEASRADF-----YNEELG-----YRDVDCVITAVELEVLLANELAT 286
I+ V +MPC KK+EASR +F YN+E G YRDVD V+T E+ LL +L
Sbjct: 216 IFTVAVMPCTSKKVEASRPEFNSAWKYNQEQGANVAEYRDVDAVLTTREMAQLL--KLLE 273
Query: 287 TTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLR 346
L + + D + E+ + +GG L A + L E +EF+P+R
Sbjct: 274 IDLAKTPEYEGDSLFSEYTGAGTIF---GATGGVMEAALRTAHKVLTGDEMAKLEFEPVR 330
Query: 347 N-PDIREATFT------CGDVTLRFCIANGF-RNIQNLIQKLKRKRLPYDFIEIMACPSG 398
++ A+ T DVT+ + + N++ +++ + PY FIE+M C G
Sbjct: 331 GLAGVKAASVTLFDQSLSQDVTVNVAVVHDMGNNVEPILRDIMAGISPYHFIEVMNCAGG 390
Query: 399 CLNGGAQ 405
C+NGG Q
Sbjct: 391 CVNGGGQ 397
>gi|192288570|ref|YP_001989175.1| hydrogenase, Fe-only [Rhodopseudomonas palustris TIE-1]
gi|192282319|gb|ACE98699.1| hydrogenase, Fe-only [Rhodopseudomonas palustris TIE-1]
Length = 619
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 177/362 (48%), Gaps = 31/362 (8%)
Query: 117 VLSLAIQPVLSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
V+ A ++ G +F L + V ++ ++LGVD+VLD A ++E E L
Sbjct: 249 VVQFAPAVRVAFGEEFGLPAGTNVEGQIIAACRKLGVDVVLDTNFAADVVIMEEGAELLA 308
Query: 176 RFLSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
R G P FTS CP W+ +AE H +LP +S KSPQQV+ ++ K++L +LGV
Sbjct: 309 RLKQGRRPTFTSCCPAWINFAE-IHYPDVLPLLSSTKSPQQVLSTIAKSYLPAQLGVPAE 367
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
I +++MPC KK EA R ++ G + D V+T E L L+ E
Sbjct: 368 RIRVISIMPCIAKKDEAVRPQMVHD--GQPETDLVLTTREFARL---------LRREGID 416
Query: 296 ILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCP----GESPVVEFKPLRNP 348
+ D P + + R L +G+G G V+ A+R + E +E LR
Sbjct: 417 LKDLPSSQFD--RPFLSAYSGAGAIFGTTGGVMEAAVRTIYALVNGRELDRIELTQLRGF 474
Query: 349 D-IREATFTCGDVT--LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
+ +REAT G ++ + +G + + L++ + YDFIE+MACP GC++GG
Sbjct: 475 EGLREATVDLGGPVGEVKVAMVHGLGDTRRLVESVLSGEANYDFIEVMACPGGCVDGGGS 534
Query: 406 IRNEKVASPKETALELETILCDLAKS----EPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
+R++K P AL+ + ++ ++ + N ++ LY+ L +++ +L+T
Sbjct: 535 LRSKKAYLP--LALKRRETIYNVDRAAKVRQSHNNPQVQVLYRELLQAPNSEIAHRLLHT 592
Query: 462 SY 463
Y
Sbjct: 593 HY 594
>gi|347542622|ref|YP_004857259.1| iron hydrogenase [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985658|dbj|BAK81333.1| iron hydrogenase [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 578
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 183/410 (44%), Gaps = 40/410 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIREN-NAHKASSNENTKTIVLSLAIQPVLSL 128
T+C+ C C+ + ++SH E +K EN + H ++ ++A SL
Sbjct: 188 TNCILCGQCVNICPVDALYEKSHIERVKEALENPDIH----------VIAAMAPSVRTSL 237
Query: 129 GAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLF 185
G F + + V K+ +++G D + D+ +++E EF ++ S P+F
Sbjct: 238 GELFKMDYGIDVTNKIYTALRKIGFDKIFDINFGADLTIMEEATEFANKIRSNNTNFPMF 297
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CP WV AE +H +L +S KSPQQ+ G+ K++ + P ++ VT+MPC
Sbjct: 298 TSCCPAWVRLAE-NHFPELLDNLSSTKSPQQIFGAASKSYYPSIENLDPKKVFTVTIMPC 356
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA R + N G R++D VIT E +L EL E DG LD
Sbjct: 357 TAKKFEADRPEMINN--GVRNIDAVITTREFGRMLK-ELKIDFASLE-DGELD------- 405
Query: 306 PHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD 359
M L G G +GG L A L + +E+K +R + I+EAT +
Sbjct: 406 -EAMGLYTGAGAIFGVTGGVMEAALRSAKDMLENKDLDKIEYKDVRGFEGIKEATVEINN 464
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ------IRNEKVAS 413
+ NG N +++ + Y FIE+MAC GC+NGG Q +RN K+
Sbjct: 465 KEYNVAVVNGASNFFKMMKDNLLDKKQYHFIEVMACYGGCINGGGQPYVTPKMRN-KIDY 523
Query: 414 PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
K L +L + +N L +YK ++G +L+ Y
Sbjct: 524 KKLRGNVLYNQDKNLKYRKSHQNPALLKMYKTYMGTPGEGLAHEILHQKY 573
>gi|118444478|ref|YP_878332.1| hydrogenase [Clostridium novyi NT]
gi|118134934|gb|ABK61978.1| hydrogenase [Clostridium novyi NT]
Length = 579
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 177/403 (43%), Gaps = 27/403 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+CL C C+ +++ H + V+ I N K +++++A S+
Sbjct: 194 TNCLLCGQCVNICPVAALSETPHIDRVLDAI----------NNPKKHVIVAIAPSVRASI 243
Query: 129 GAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F +S+ V KL ++LG D + D+ ++VE E ++R + G P+FT
Sbjct: 244 GEAFNMSYGTDVTYKLYTALRKLGFDKIFDLNFGADLTIVEEAEELVERIKNNGPYPMFT 303
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S C WV AE E +LP +S KSPQQ+ G+ KT+ + + P ++ VT+MPC
Sbjct: 304 SCCSAWVRQAENYFKE-LLPNLSSTKSPQQIFGAASKTYYPHLMNLDPKDVFTVTIMPCT 362
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNP 306
KK EA R + G +D V+TA EL ++ ++G+ D E++
Sbjct: 363 AKKFEAQRDEMAVN--GVDSIDAVLTARELIKIIK--DKKIDFPNLENGVQDPAMGEYSG 418
Query: 307 HRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRFC 365
+ +GG L A L +++K +R I+E T T +
Sbjct: 419 AGAIF---GATGGVMEAALRTAKELLENKSLDNIDYKEVRGFKGIKETTVTINNKEYNLA 475
Query: 366 IANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-----IRNEKVASPKETALE 420
+ NG N+ I ++ Y FIE+M+C GC+NGG E V K +
Sbjct: 476 VINGSSNVFKFINSDMMRKKQYHFIEVMSCEGGCINGGGHPHVNSTTRELVDYKKLRSSV 535
Query: 421 LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L +L K + EN + +Y ++G D + + SY
Sbjct: 536 LYNQDLNLPKRKSHENTAIIKMYDNFIGKPGNDFAHKIFHFSY 578
>gi|333995596|ref|YP_004528209.1| iron hydrogenase 1 [Treponema azotonutricium ZAS-9]
gi|333734672|gb|AEF80621.1| iron hydrogenase 1 ([Fe] hydrogenase) (Fe-onlyhydrogenase) (CpI)
[Treponema azotonutricium ZAS-9]
gi|342308737|gb|AEL20841.1| HndA [Treponema azotonutricium ZAS-9]
Length = 585
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 176/381 (46%), Gaps = 56/381 (14%)
Query: 117 VLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
V+ +A ++L +F L V K + +RLG V D + +++E E +
Sbjct: 227 VVQIAPAVRVALAEEFGLPPGTVFTKKIYAALRRLGFKTVFDTNFSADLTIMEEGTELVK 286
Query: 176 RFLSGGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVH 233
R + G PL TS CP WV Y EK + + I P S KSPQQ+MG++IK + AEK GV
Sbjct: 287 RLTTKGSDIPLITSCCPAWVDYMEKYYADMI-PNFSTAKSPQQMMGAMIKAYWAEKAGVD 345
Query: 234 PSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEK 293
P+ IY V++MPC KK E+ R D DVD VIT EL ++ A + +
Sbjct: 346 PNKIYSVSVMPCTAKKWESHRNDDMKSAGHGFDVDIVITTRELARMIKQ--AGIEILKLD 403
Query: 294 DGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ----LCPGESPVVEFKPLR 346
D D P + TG+G G V+ A+R + E V F P R
Sbjct: 404 DEEADSPMGPY----------TGAGTIFGVTGGVMEAAVRSAYFLVTKKELGDVNFLPAR 453
Query: 347 NPD-IREATFTCGDVT-LRFCIANGFRNIQNLIQKLKRKR-----LPYDFIEIMAC---- 395
D ++EA G+ T ++ IA+ NI+ ++ K++ R PY F+E+MAC
Sbjct: 454 GLDGVKEAEVDFGNGTKIKIAIAHQMGNIEAVLNKIRDARDAGKETPYHFVEVMACRGGC 513
Query: 396 ------PSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAW 446
P GC + ++R L E I D +S+ R +N + +YK +
Sbjct: 514 IGGGGQPYGCTD---EVRK----------LRTEGIYKDDTQSKLRCSHQNPFITQVYKEF 560
Query: 447 LGGKSTDKGKHMLNTSYHNIP 467
LG + K +L+T Y +P
Sbjct: 561 LGEPNGHKAHELLHTKYVELP 581
>gi|297616331|ref|YP_003701490.1| hydrogenase, Fe-only [Syntrophothermus lipocalidus DSM 12680]
gi|297144168|gb|ADI00925.1| hydrogenase, Fe-only [Syntrophothermus lipocalidus DSM 12680]
Length = 574
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 196/406 (48%), Gaps = 30/406 (7%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C CI + I+++ E++ + + A+ + K +V +A ++G +
Sbjct: 189 CVMCGQCIHACPVGAISEK--EQIDEFL-------AAVADPDKIVVTQIAPAVRTAIGEE 239
Query: 132 FALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSEC 189
++ E + +++G D VL +++E NE L R GG P+FTS
Sbjct: 240 VGMATGEMPMEVFVAGLRQIGFDYVLHTNFTADLTIMEEGNELLKRLKEGGKLPMFTSCS 299
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGW+ + E + + +L ++S KSPQQ+ G+L+KT+ A+K+G+ PS IY V++MPC KK
Sbjct: 300 PGWINFCETFYPD-LLEHLSTCKSPQQMFGALVKTYWAQKMGIDPSKIYSVSIMPCTAKK 358
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRM 309
EASR + + GYRDVD V+T E+ L +A + D W
Sbjct: 359 FEASRPEMKDS--GYRDVDLVLTTREVGRLF--RMAGIDFKTLTPSKFD-SWMGAYTGAA 413
Query: 310 LLVNGTGSGGYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTCGDVTLRF 364
++ TG V+ A+R ++ G++ V F R + I+EA ++
Sbjct: 414 VIFGATG------GVMEAALRTVYEVVTGKTLEDVNFTFARGMEGIKEAEIDLDGTKVKV 467
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETI 424
I +G N + L+ +++ + PY FIEIMACP GC+ GG Q + A E +
Sbjct: 468 AIGHGLANARKLMDQVRAGQSPYHFIEIMACPGGCIGGGGQPLTKTNAKRAERIDSIYVE 527
Query: 425 LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
L + EN ++ LY+ +L K +L+T YH PKN
Sbjct: 528 DESLPIRKSHENPEVKILYEEFLHEPLGHKSHELLHTHYH--PKNK 571
>gi|189485525|ref|YP_001956466.1| NAD-dependent Fe-hydrogenase catalytic component [uncultured
Termite group 1 bacterium phylotype Rs-D17]
gi|170287484|dbj|BAG14005.1| NAD-dependent Fe-hydrogenase catalytic component [uncultured
Termite group 1 bacterium phylotype Rs-D17]
Length = 667
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 163/362 (45%), Gaps = 13/362 (3%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSH---EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELE 170
K +V+++A S+G F + + K+ + +G V DV A ++VE
Sbjct: 222 KKVVVAIAPAVRASIGEVFGFAGGNGTETAGKIVTALRSMGFAKVFDVSFAADMTIVEEA 281
Query: 171 NEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEK 229
+EFL+R PLFTS CP WV + E+ + +FI +S +SPQ + GS+ K + E
Sbjct: 282 DEFLNRLKKNKDMPLFTSCCPAWVKFVEQYYPDFI-SNLSSCRSPQAMYGSVAKKIMPEM 340
Query: 230 LGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTL 289
L + + V++MPC KK EA R + G D+D V+T EL ++ E A
Sbjct: 341 LKISKEDLTVVSIMPCTAKKFEARRPELSKN--GVADIDYVLTTQELARMI--EEAGLLF 396
Query: 290 QEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
E + D P ++ N SGG VL + G +F +R D
Sbjct: 397 GELEPSAFDMPLGFKTGGGVIFGN---SGGVTEAVLRDIVSNNSGGAGKTEQFVFVRGED 453
Query: 350 -IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
+RE G L + G +N + +++ +K R YDF+E+MACP GC+ G Q
Sbjct: 454 GLREVKVNFGGRELNIAVVYGLKNARKILKDIKVDRSRYDFVEVMACPGGCIGGAGQPVY 513
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
+ ++ K L + P++N ++ +YK + + L+T + N +
Sbjct: 514 KDLSVRKTRTKVLYESDKTMELRRPQDNPYVQKVYKDYFNKPGSCAAHEYLHTGHKNRKR 573
Query: 469 NN 470
N
Sbjct: 574 FN 575
>gi|158319966|ref|YP_001512473.1| hydrogenase, Fe-only [Alkaliphilus oremlandii OhILAs]
gi|158140165|gb|ABW18477.1| hydrogenase, Fe-only [Alkaliphilus oremlandii OhILAs]
Length = 578
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 165/345 (47%), Gaps = 25/345 (7%)
Query: 68 SLTD--CLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
SL D C C CIT+ L +++ ++V K I + K +V+ A
Sbjct: 181 SLDDVFCTNCGQCITACPVGALYEKENIKDVWKAIYDKE----------KYVVVQTAPAI 230
Query: 125 VLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+LG +F + V K+ +RLG D V D +++E E + R SG
Sbjct: 231 RAALGEEFGIPVGTSVTGKMVAALRRLGFDKVFDTDFTADLTIMEEGTELISRLTSGENL 290
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PL TS CPGW+ +AE + + +L +S KSP ++ G+LIK++ AEK+ + P I V++
Sbjct: 291 PLMTSCCPGWIKFAEHFYPD-MLDNLSTCKSPHEMEGALIKSYFAEKMAMDPKKIVTVSI 349
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK E++R + N+ G +DVD V+T EL ++ A + D P+
Sbjct: 350 MPCTAKKFESARGELSND--GLQDVDLVLTTRELARMIKE--AGIDFENLPVEEFDNPFG 405
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGD-V 360
E ++ +GG A L L E V + +R + ++EA + +
Sbjct: 406 ESTGAAVIF---GVTGGVAEAALRTVFEILSGKELETVNYTAVRGLEGVKEAVIELPNGM 462
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
T+ +A+G N + + ++ Y FIE+MACP GC+ GG Q
Sbjct: 463 TINSIVAHGLGNARKALDVVRNGEKQYHFIEVMACPGGCVTGGGQ 507
>gi|24375408|ref|NP_719451.1| periplasmic [Fe-Fe] hydrogenase large subunit HydA [Shewanella
oneidensis MR-1]
gi|24350246|gb|AAN56895.1| periplasmic [Fe-Fe] hydrogenase large subunit HydA [Shewanella
oneidensis MR-1]
Length = 410
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 183/361 (50%), Gaps = 42/361 (11%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
CL+C C+ + I +++H + VI K +++NT T+V +A +++G +
Sbjct: 52 CLSCGQCLINCPFSAI-EETHSALETVI------KKLADKNT-TVVGIIAPAVRVAIGEE 103
Query: 132 FAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG------GGPL 184
F L + E V KL G + G + D A +++E +EF+ R + GPL
Sbjct: 104 FGLGTGELVTGKLYGAMNQAGFK-IFDCNFAADLTIMEEGSEFIHRLHANVKGEANAGPL 162
Query: 185 --FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
FTS CPGWV Y E + +LP +S KSPQQ+ G++ KT+ A+ + P +I+ V++
Sbjct: 163 PQFTSCCPGWVRYLETRY-PALLPNLSTAKSPQQMAGTVAKTYGAKVYQMQPENIFTVSV 221
Query: 243 MPCYDKKLEASRADF-----YNEELG-----YRDVDCVITAVELEVLLANELATTTLQEE 292
MPC KKLEASR +F Y++E G Y+D+D V+T E+ LL +L L
Sbjct: 222 MPCTSKKLEASRPEFNSAWQYHQEHGANSPSYQDIDAVLTTREMAQLL--KLLDIDLANT 279
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIR 351
+ D + E+ + GT +GG L A + L E +EF+P+R ++
Sbjct: 280 AEYQGDSLFSEYTGAGTIF--GT-TGGVMEAALRTAHKVLTGTEMAKLEFEPVRGLKGVK 336
Query: 352 EATFTC------GDVTLRFCIANGF-RNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
A+ + DVT+ + + NI+ +++ + PY FIE+M C GC+NGG
Sbjct: 337 SASVSLFDTELNQDVTVNVAVVHDMGNNIEPVLRDVMAGTSPYHFIEVMNCAGGCVNGGG 396
Query: 405 Q 405
Q
Sbjct: 397 Q 397
>gi|150007689|ref|YP_001302432.1| NADH:ubiquinone oxidoreductase subunit [Parabacteroides distasonis
ATCC 8503]
gi|255013606|ref|ZP_05285732.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 2_1_7]
gi|410103537|ref|ZP_11298458.1| hydrogenase, Fe-only [Parabacteroides sp. D25]
gi|423331817|ref|ZP_17309601.1| hydrogenase, Fe-only [Parabacteroides distasonis CL03T12C09]
gi|149936113|gb|ABR42810.1| NADH:ubiquinone oxidoreductase subunit [Parabacteroides distasonis
ATCC 8503]
gi|409229658|gb|EKN22530.1| hydrogenase, Fe-only [Parabacteroides distasonis CL03T12C09]
gi|409236266|gb|EKN29073.1| hydrogenase, Fe-only [Parabacteroides sp. D25]
Length = 596
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 172/363 (47%), Gaps = 22/363 (6%)
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
TK ++ A +LG F +V K+ ++LG D V D A +++E
Sbjct: 227 TKIVIAQTAPAVRTALGRDFGYEPGTLVTGKMVSALRQLGFDYVFDTDFAADLTIMEEGT 286
Query: 172 EFLDR---FLSGGG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
E L R +L+G PL TS CPGWV + E+ E + +S KSPQQ+ G++ K+
Sbjct: 287 ELLHRLGSYLNGDKEVKIPLMTSCCPGWVSFVEQHFPE-LRDNLSTAKSPQQMFGAIAKS 345
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEKLGV + V++MPC KK EASR +F E G DVD I EL L+
Sbjct: 346 YFAEKLGVDRKDLVVVSIMPCLAKKYEASRPEFSVE--GNPDVDYSIYTRELARLI--RY 401
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKP 344
A E DG D P E ++ GT +GG A V+F+
Sbjct: 402 ANIDFNELPDGEFDSPLGESTGASVIF--GT-TGGVIEAACRTAYELYTKKNLDKVDFEE 458
Query: 345 LRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGG 403
LR + IR AT ++ IA+G N + LI+++K PY IE+MACP GC+ GG
Sbjct: 459 LRGLEGIRSATIDFNGTPVKIGIAHGLGNARKLIEEVKNGTSPYHAIEVMACPGGCIGGG 518
Query: 404 AQIRNE---KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
Q + +V + +AL E L KS EN ++ LY +LG K +L+
Sbjct: 519 GQPFHRGRMEVLRRRASALYREDANKPLRKSH--ENPYIQQLYSEYLGEPCGPKAHKLLH 576
Query: 461 TSY 463
T Y
Sbjct: 577 THY 579
>gi|262381802|ref|ZP_06074940.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 2_1_33B]
gi|262296979|gb|EEY84909.1| NADH:ubiquinone oxidoreductase subunit [Bacteroides sp. 2_1_33B]
Length = 596
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 171/363 (47%), Gaps = 22/363 (6%)
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
TK ++ A +LG F +V K+ ++LG D V D A +++E
Sbjct: 227 TKIVIAQTAPAVRTALGRDFGYEPGTLVTGKMVSALRQLGFDYVFDTDFAADLTIMEEGT 286
Query: 172 EFLDR---FLSGGG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
E L R +L+G PL TS CPGWV + E+ E + +S KSPQQ+ G++ K+
Sbjct: 287 ELLHRLGSYLNGDKEVKIPLMTSCCPGWVSFVEQHFPE-LRDNLSTAKSPQQMFGAIAKS 345
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEKLGV + V++MPC KK EASR +F E G DVD I EL L+
Sbjct: 346 YFAEKLGVDRKDLVVVSIMPCLAKKYEASRPEFSVE--GNPDVDYSIYTRELARLI--RY 401
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKP 344
A E DG D P E ++ GT +GG A V+F+
Sbjct: 402 ANIDFNELPDGEFDRPLGESTGASVIF--GT-TGGVIEAACRTAYELYTKKNLDKVDFEE 458
Query: 345 LRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGG 403
LR + IR AT ++ IA+G N + LI+++K PY IE+MACP GC+ GG
Sbjct: 459 LRGLEGIRSATIDFNGTQVKIGIAHGLGNARKLIEEVKNGTSPYHAIEVMACPGGCIGGG 518
Query: 404 AQIRNE---KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
Q + +V + AL E L KS EN ++ LY +LG K +L+
Sbjct: 519 GQPFHRGRMEVLRRRAAALYREDANKPLRKSH--ENPYIQQLYSEYLGEPCGPKAHKLLH 576
Query: 461 TSY 463
T Y
Sbjct: 577 THY 579
>gi|117919163|ref|YP_868355.1| response regulator receiver protein [Shewanella sp. ANA-3]
gi|117611495|gb|ABK46949.1| response regulator receiver protein [Shewanella sp. ANA-3]
Length = 410
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 182/361 (50%), Gaps = 42/361 (11%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
CL+C C+ + I +++H + VI K +++NT T+V +A +++G +
Sbjct: 52 CLSCGQCLINCPFSAI-EETHSALETVI------KKLADKNT-TVVGIIAPAVRVAIGEE 103
Query: 132 FAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS--------GGG 182
F L + E V KL G + G + D A +++E +EF+ R + G
Sbjct: 104 FGLGTGELVTGKLYGAMNQAGFK-IFDCNFAADLTIMEEGSEFIHRLHANVKGEENAGAL 162
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P FTS CPGWV Y E + +LP +S KSPQQ+ G++ KT+ A+ + P +I+ V++
Sbjct: 163 PQFTSCCPGWVRYLETRY-PALLPNLSTAKSPQQMAGTVAKTYGAKVYQMQPENIFTVSV 221
Query: 243 MPCYDKKLEASRADF-----YNEELG-----YRDVDCVITAVELEVLLANELATTTLQEE 292
MPC KKLEASR +F Y++E G Y+D+D V+T E+ LL ++ L
Sbjct: 222 MPCTSKKLEASRPEFNSAWQYHQEQGANTPSYQDIDAVLTTREMAQLL--KMLDIDLANT 279
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIR 351
+ D + E+ + GT +GG L A + L E +EF+P+R ++
Sbjct: 280 PEYQGDSMFSEYTGAGTIF--GT-TGGVMEAALRTAHKVLTGTEMAKLEFEPVRGLKGVK 336
Query: 352 EATFTCGD------VTLRFCIANGF-RNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
A+ + D VT+ + + NI+ +++ + PY FIE+M C GC+NGG
Sbjct: 337 SASVSLFDTQLNQNVTVNVAVVHDMGNNIEPVLRDVMAGTSPYHFIEVMNCAGGCVNGGG 396
Query: 405 Q 405
Q
Sbjct: 397 Q 397
>gi|220929711|ref|YP_002506620.1| hydrogenase, Fe-only [Clostridium cellulolyticum H10]
gi|220000039|gb|ACL76640.1| hydrogenase, Fe-only [Clostridium cellulolyticum H10]
Length = 562
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 187/410 (45%), Gaps = 41/410 (10%)
Query: 49 GAYIQETNGREEKLKKVEISLTDCLACSGC-ITSAESVLITQQSHEEVMKVIRENNAHKA 107
G+ +Q T + L++V DC+ C C + L+ ++ + K + + N
Sbjct: 170 GSNLQVTTAFNKSLQEV-----DCVNCGQCRVVCPTGALMIKKDIDRAYKALHDKN---- 220
Query: 108 SSNENTKTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSL 166
K ++ +A +++G F L ++ + K+ ++LG D V D + ++
Sbjct: 221 ------KRVIAQIAPAVRVAIGEDFGLQPGEISMGKIVSALRKLGFDQVFDTAVGADLTV 274
Query: 167 VELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTH 225
+E E +DR PLF+S CP W YAE+ H + ++ +S SPQQ+ G++IK
Sbjct: 275 IEEAEELMDRIQRKEKLPLFSSCCPAWFKYAEQKHPD-LMENVSSCLSPQQMFGAVIKEQ 333
Query: 226 LAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELA 285
+ + +MPC KK EA+R + N G R VD VIT EL +++
Sbjct: 334 YKREKASDEKENVVIAIMPCTAKKYEAARPE--NTINGERQVDMVITTQELAIMIQEN-- 389
Query: 286 TTTLQEEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVV 340
E +D +D P+ +G G SGG + VL + ++ +
Sbjct: 390 GIVFNELEDEAIDMPFG--------FTSGAGVIFGVSGGVSEAVLRYYYKERNASTLRGL 441
Query: 341 EFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
+ +R + ++EA+ T+R I +G +N + LI+++K +DFIE+MACP GC
Sbjct: 442 SYCGVRGMEGVKEASAEIDGRTVRIGIVHGLKNAEKLIRRIKSGEEKFDFIEVMACPGGC 501
Query: 400 LNGGAQ--IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWL 447
+ G Q +NE V K A + + L +N T++ LY L
Sbjct: 502 IGGAGQPIPQNENVR--KLRAKGIYKVDKSLPIKRSDDNPTIDALYNGIL 549
>gi|346308076|ref|ZP_08850202.1| hypothetical protein HMPREF9457_01911 [Dorea formicigenerans
4_6_53AFAA]
gi|345903873|gb|EGX73624.1| hypothetical protein HMPREF9457_01911 [Dorea formicigenerans
4_6_53AFAA]
Length = 589
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 199/420 (47%), Gaps = 42/420 (10%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I+ TDC+ C C + I+ +++ +V+ A ++++T ++ +A +
Sbjct: 183 IAQTDCVNCGQCRVVCPTGAISIKTNIDVV--------WDALADKDT-IVIAQIAPAVRV 233
Query: 127 SLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
+ G +F + E V+ KL G RLG D V D +++E EF++RF +G PL
Sbjct: 234 AAGEEFGIPKGENVMGKLVGVLHRLGFDEVYDTAYGADLTVMEESKEFMERFNAGENLPL 293
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CP WV + E + EF+ P++S +SPQQ+ G++++ + + V++MP
Sbjct: 294 FTSCCPAWVKFCENRYPEFV-PHLSTCRSPQQMFGAVVREYYKNPENNAGKKLVSVSIMP 352
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK E R + ++ G +D+D V+T EL ++ ++ GI+ +D+
Sbjct: 353 CTAKKEEILRPE--SKTNGRQDIDYVLTTTELISMI-----------KRAGIM---FDQV 396
Query: 305 NPHRMLLVNGTGSG-----GYAHNVLSHAIRQLCPG--ESPVVEFKP--LRNPD-IREAT 354
+ G GSG G V +R++ G + + E K +R D I+E
Sbjct: 397 EIESADVPFGIGSGAGVIFGVTGGVTEAVLRKITQGHKRADMEELKSSGVRGDDGIKEIV 456
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
+ ++ I +G N L++K+K + YDF+E+MAC GC+ GG Q N +
Sbjct: 457 YDYNGKEIKAAIVSGLANADQLLKKIKSGEIHYDFVEVMACRRGCVMGGGQPLNAGAHTR 516
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNNIALN 474
+ L + + EN ++ LY+ L GK+ + +L+ ++ K I N
Sbjct: 517 EARMQGLYKADVNTQIKKSDENPMVQSLYEGLLKGKTHE----LLHRNFAEAEKEKINRN 572
>gi|197301313|ref|ZP_03166398.1| hypothetical protein RUMLAC_00044 [Ruminococcus lactaris ATCC
29176]
gi|197299631|gb|EDY34146.1| hydrogenase, Fe-only [Ruminococcus lactaris ATCC 29176]
Length = 566
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 184/400 (46%), Gaps = 38/400 (9%)
Query: 66 EISLTDCLACSGCITSAESVLIT-QQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
E++ TDC+ C C + I+ +Q + V K + + N +V +A
Sbjct: 182 ELAETDCVGCGQCRAVCPTGAISIRQDVDPVWKALADKNIR----------VVAQIAPAV 231
Query: 125 VLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+++G KF + E + +L + +G D V D +++E E L+R SG
Sbjct: 232 RVAIGDKFGIPKGENTLGRLVAALRHMGFDEVYDTNFGADLTVMEESAELLERLKSGKNL 291
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHL------AEKLGVHPSH 236
PLFTS CPGWV + E + EF IS +SPQ + G+L+K AEK G
Sbjct: 292 PLFTSCCPGWVKFCENRYPEF-RENISTCRSPQAMFGALLKEEARMKAAEAEKEGRSLRK 350
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
+++MPC KK E R + + E G +DVD V+T E+ ++ A L + +
Sbjct: 351 TVVISIMPCTAKKAEIKRPEHFTE--GQQDVDYVLTTTEVTRMIKE--AGIDLSQIEPEA 406
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATF 355
LD P+ + + +GG VL + + + F +R + I+EA+
Sbjct: 407 LDMPFGLSSGAAAIF---GVTGGVTEAVLRRLVHSSRMEDLQDISFTGIRGIEGIKEASI 463
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
D T++ + NG R + L++++K + YDF+E+MAC GC+ GG Q P+
Sbjct: 464 QLEDRTVKIAVVNGLRCAETLLERIKAGEVQYDFVEVMACKRGCIAGGGQ---PVPIGPR 520
Query: 416 ETALELETI-----LCDLAKSEPRENATLEHLYKAWLGGK 450
L+ + + + +S+ EN + +Y+ L GK
Sbjct: 521 TKQARLDGMYKIDSMAQIKRSD--ENPIIAEVYEGILKGK 558
>gi|419760455|ref|ZP_14286734.1| hydrogenase [Thermosipho africanus H17ap60334]
gi|407514558|gb|EKF49373.1| hydrogenase [Thermosipho africanus H17ap60334]
Length = 583
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 195/412 (47%), Gaps = 40/412 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T+C++C C I + +V+K++ ++ K +V A +++
Sbjct: 186 TNCISCGQCAYLCPVGAIYETPDWRKVLKIL---------DKKDNKILVAQTAPSVRVAI 236
Query: 129 GAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G +F + V K+ +RLG D V D A +++E E + R GG P+FT
Sbjct: 237 GEEFGMEPGSVSTGKMVAAIRRLGFDYVFDTNFAADLTIMEEGTELIGRIKDGGPFPMFT 296
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGW+ EK + EFI S KSPQQ+M ++KT+ A+K+GV P I V++MPC
Sbjct: 297 SCCPGWINLLEKEYPEFI-NNASSAKSPQQMMSPIVKTYFAKKIGVDPEDIIMVSIMPCT 355
Query: 247 DKKLEASRADFYNEELGYRDV---DCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
KK E +R + R++ D VIT EL L+ + Q G+ D +D
Sbjct: 356 AKKDEITRPQQKIKLEDGREIKTTDYVITTRELAKLIKMK------QINFIGLDDEDFD- 408
Query: 304 HNPHRMLLVNGTG-------SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATF 355
NP L TG +GG L A + + P +EF +R D IRE
Sbjct: 409 -NP----LGTSTGAAAIFGVTGGVMEAALRTAYELITNKKLPKLEFNAVRGLDGIRETEI 463
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
L+ IA+G N++ L+ ++ YDFIEIMACP GC+ GG Q ++ K
Sbjct: 464 DIEGKKLKVAIAHGTANVKKLLDDIRDGVRYYDFIEIMACPGGCIGGGGQPKSLDPDILK 523
Query: 416 ETALELETI--LCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ A + +I L L +S EN ++ LY+ +L ++ +L+T Y +
Sbjct: 524 KRASAIYSIDELSTLRRS--HENPDIQKLYEEFLEKPNSHIAHELLHTYYTD 573
>gi|301310274|ref|ZP_07216213.1| putative [Fe] hydrogenase, large subunit HymC [Bacteroides sp.
20_3]
gi|423336515|ref|ZP_17314262.1| hydrogenase, Fe-only [Parabacteroides distasonis CL09T03C24]
gi|300831848|gb|EFK62479.1| putative [Fe] hydrogenase, large subunit HymC [Bacteroides sp.
20_3]
gi|409240990|gb|EKN33764.1| hydrogenase, Fe-only [Parabacteroides distasonis CL09T03C24]
Length = 596
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 171/363 (47%), Gaps = 22/363 (6%)
Query: 113 TKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
TK ++ A +LG F +V K+ ++LG D V D A +++E
Sbjct: 227 TKIVIAQTAPAVRTALGRDFGYEPGTLVTGKMVSALRQLGFDYVFDTDFAADLTIMEEGT 286
Query: 172 EFLDR---FLSGGG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
E L R +L+G PL TS CPGWV + E+ E + +S KSPQQ+ G++ K+
Sbjct: 287 ELLHRLGSYLNGDKEVKIPLMTSCCPGWVSFVEQHFPE-LRDNLSTAKSPQQMFGAIAKS 345
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ AEKLGV + V++MPC KK EASR +F E G DVD I EL L+
Sbjct: 346 YFAEKLGVDRKDLVVVSIMPCLAKKYEASRPEFSVE--GNPDVDYSIYTRELARLI--RY 401
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKP 344
A E DG D P E ++ GT +GG A V+F+
Sbjct: 402 ANIDFNELPDGEFDRPLGESTGASVIF--GT-TGGVIEAACRTAYELYTKKNLDKVDFEE 458
Query: 345 LRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGG 403
LR + IR AT ++ IA+G N + LI+++K PY IE+MACP GC+ GG
Sbjct: 459 LRGLEGIRSATIDFNGTPVKIGIAHGLGNARKLIEEVKNGTSPYHAIEVMACPGGCIGGG 518
Query: 404 AQIRNE---KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
Q + +V + AL E L KS EN ++ LY +LG K +L+
Sbjct: 519 GQPFHRGRMEVLRRRAAALYREDANKPLRKSH--ENPYIQQLYSEYLGEPCGPKAHKLLH 576
Query: 461 TSY 463
T Y
Sbjct: 577 THY 579
>gi|255527517|ref|ZP_05394385.1| hydrogenase, Fe-only [Clostridium carboxidivorans P7]
gi|255508787|gb|EET85159.1| hydrogenase, Fe-only [Clostridium carboxidivorans P7]
Length = 426
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 143/270 (52%), Gaps = 18/270 (6%)
Query: 142 KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSH 200
K+ ++LG D V D + +++E +E ++R GG P+FTS CP WV Y E+++
Sbjct: 136 KMAAALRKLGFDRVYDTNFSADLTIMEEGSELIERVTKGGTLPMFTSCCPAWVKYLEQTY 195
Query: 201 GEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNE 260
E +L ++S KSPQQ+ G++ KT+ A+ V+P+ + V++MPC K E+ R + +
Sbjct: 196 PE-LLDHLSTCKSPQQMAGAIFKTYGAKINNVNPAKMLSVSVMPCTCKDFESGREEM--K 252
Query: 261 ELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWDEHNPHRMLLVNGT---G 316
+ GYRDVD VIT EL L+ + + L+EE+ +D +P M GT
Sbjct: 253 DSGYRDVDLVITTRELAYLIKDSGIDFKELEEEE-------FD--DPLGMYTGAGTIFGA 303
Query: 317 SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQN 375
+GG L + + P V+ +R + R A GD+ L+ I +G +N
Sbjct: 304 TGGVMEAALRTGYELITKKQIPSVDLSAVRGGEGFRTAEVQVGDLKLKVGIVSGLKNAAP 363
Query: 376 LIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
+++ +K+ FIE M CP GC++GG Q
Sbjct: 364 VLESIKKGECDLHFIEFMTCPIGCVSGGGQ 393
>gi|113971582|ref|YP_735375.1| hydrogenases, Fe-only [Shewanella sp. MR-4]
gi|113886266|gb|ABI40318.1| hydrogenases, Fe-only [Shewanella sp. MR-4]
Length = 410
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 182/361 (50%), Gaps = 42/361 (11%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
CL+C C+ + I +++H + VI K +++NT T+V +A +++G +
Sbjct: 52 CLSCGQCLINCPFSAI-EETHSALETVI------KKLADKNT-TVVGIIAPAVRVAIGEE 103
Query: 132 FAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS--------GGG 182
F L + E V KL G + G + D A +++E +EF+ R + G
Sbjct: 104 FGLGTGELVTGKLYGAMNQAGFK-IFDCNFAADLTIMEEGSEFIHRLHANAKGEENAGAL 162
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P FTS CPGWV Y E + +LP +S KSPQQ+ G++ KT+ A+ + P +I+ V++
Sbjct: 163 PQFTSCCPGWVRYLETRY-PALLPNLSTAKSPQQMAGTVAKTYGAKVYQMQPENIFTVSV 221
Query: 243 MPCYDKKLEASRADF-----YNEELG-----YRDVDCVITAVELEVLLANELATTTLQEE 292
MPC KKLEASR +F Y++E G Y+D+D V+T E+ LL ++ L
Sbjct: 222 MPCTSKKLEASRPEFNSAWQYHQEHGANTPSYQDIDAVLTTREMAQLL--KMLDIDLANT 279
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIR 351
+ D + E+ + GT +GG L A + L E +EF+P+R ++
Sbjct: 280 PEYQGDSLFSEYTGAGTIF--GT-TGGVMEAALRTAHKVLTGTEMAKLEFEPVRGLKGVK 336
Query: 352 EATFTCGD------VTLRFCIANGF-RNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
A+ + D VT+ + + NI+ +++ + PY FIE+M C GC+NGG
Sbjct: 337 SASVSLFDTELNQNVTVNVAVVHDMGNNIEPVLRDVMAGTSPYHFIEVMNCAGGCVNGGG 396
Query: 405 Q 405
Q
Sbjct: 397 Q 397
>gi|88660702|gb|ABD48098.1| periplasmic Fe-hydrogenase large subunit [Shewanella
decolorationis]
Length = 410
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 182/361 (50%), Gaps = 42/361 (11%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
CL+C C+ + I +++H + VI K +++NT T+V +A +++G +
Sbjct: 52 CLSCGQCLINCPFSAI-EETHSALETVI------KKLADKNT-TVVGIIAPAVRVAIGEE 103
Query: 132 FAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLS--------GGG 182
F L + E V KL G + G + D A +++E +EF+ R + G
Sbjct: 104 FGLGTGELVTGKLYGAMNQAGFK-IFDCNFAADLTIMEEGSEFIHRLHANVKGEENAGAL 162
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P FTS CPGWV Y E + +LP +S KSPQQ+ G++ KT+ A+ + P +I+ V++
Sbjct: 163 PQFTSCCPGWVRYLETRY-PALLPNLSTAKSPQQMAGTVAKTYGAKVYQMQPENIFTVSV 221
Query: 243 MPCYDKKLEASRADF-----YNEELG-----YRDVDCVITAVELEVLLANELATTTLQEE 292
MPC KKLEASR +F Y++E G Y+D+D V+T E+ LL ++ L
Sbjct: 222 MPCTSKKLEASRPEFNSAWQYHQEHGANAPSYQDIDAVLTTREMAQLL--KMLDIDLANT 279
Query: 293 KDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIR 351
+ D + E+ + GT +GG L A + L E +EF+P+R ++
Sbjct: 280 PEYQGDSLFSEYTGAGTIF--GT-TGGVMEAALRTAHKVLTGTEMAKLEFEPVRGLKGVK 336
Query: 352 EATFTCGD------VTLRFCIANGF-RNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGA 404
A+ + D VT+ + + NI+ +++ + PY FIE+M C GC+NGG
Sbjct: 337 SASVSLFDTQLNQNVTVNVAVVHDMGNNIEPVLRDVMAGTSPYHFIEVMNCAGGCVNGGG 396
Query: 405 Q 405
Q
Sbjct: 397 Q 397
>gi|410075585|ref|XP_003955375.1| hypothetical protein KAFR_0A08060 [Kazachstania africana CBS 2517]
gi|372461957|emb|CCF56240.1| hypothetical protein KAFR_0A08060 [Kazachstania africana CBS 2517]
Length = 473
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 208/461 (45%), Gaps = 100/461 (21%)
Query: 6 FSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLKKV 65
+ +L DL+DFI PS C +P K S P + + G Y E E L+KV
Sbjct: 1 MTSLLSEEDLNDFITPSLACTRPTET-KVSEPN------VNELGEY--EVGKESETLQKV 51
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
I+L+DCLACSGCITS+E +++ + SH ++ + N + + +S+A Q
Sbjct: 52 NITLSDCLACSGCITSSEEIMLQKHSHSVFLEAM----------NRDHGPLCVSVAAQCR 101
Query: 126 LSLGAKFALSHEQVVAKLCGFFKR-------LGVDLVLDVGIAHCF-SLVELENEFLDRF 177
+S+ F + + L FFK +G+ ++ I LVE + D
Sbjct: 102 ISMSQYFGMELMEFDMWLINFFKERFQAKYVVGLQNGRNITIKQTIEKLVEWKQREQDE- 160
Query: 178 LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
P +S CPG++ Y EK+ + P + VKSPQQ+ GSL+K S +
Sbjct: 161 --NSKPRLSSVCPGFLIYTEKTKPGLV-PLLLNVKSPQQITGSLLKE--------VDSSM 209
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTT--LQEEKDG 295
YH+++ P +DKKLEA R D NE VDCVIT +E ++ + + ++K+
Sbjct: 210 YHLSISPLFDKKLEAERPDSANE------VDCVITPMEFLAMIEDLKIDISDYCTKDKNL 263
Query: 296 ILDWP---WDEHNPHRMLLVNGTGSGGYAH------NVLSHAIRQLCPGES-PVVEFKPL 345
++D+ WD + +G Y + N + + Q+ PG++ ++E++ +
Sbjct: 264 LVDYSPPGWDPSIHWASNSGSSSGGFAYQYVEYMRRNHVGNCEMQVLPGKNGNILEYRLV 323
Query: 346 RNPDIREATFTCGDVTLRFCIANGFRNIQNLIQKLK----------RKRL---------- 385
D R+ + +++ GFRNIQN+++ L RKR
Sbjct: 324 D--DERKTIASASELS-------GFRNIQNMVRNLTGGNKRKIQVLRKRTGGGATGIRHS 374
Query: 386 ------------PY--DFIEIMACPSGCLNGGAQIRNEKVA 412
P+ DFIE+ A P GC+NG I E A
Sbjct: 375 DGGDKVPKQFANPFKSDFIEVNASPGGCINGSGLINMESNA 415
>gi|373452883|ref|ZP_09544792.1| hydrogenase, Fe-only [Eubacterium sp. 3_1_31]
gi|371965080|gb|EHO82582.1| hydrogenase, Fe-only [Eubacterium sp. 3_1_31]
Length = 570
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 192/423 (45%), Gaps = 62/423 (14%)
Query: 72 CLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C+ + L+ +Q EV VI+ K +V + + LG
Sbjct: 58 CIHCGQCVNVCPTGALVERQDWMEVADVIKSGK----------KKVVAITSPSVRVGLGE 107
Query: 131 KFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F + V K + + +GV+ V D A +++E +E +DR + P FTS
Sbjct: 108 EFGMEAGSYVEKQMVAALRSVGVNYVFDTTFAADLTIMEEASELIDRIQNKKPLPQFTSC 167
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP W+ + E + + +LP IS KSP + IKT A+K G+ P IY V + PC K
Sbjct: 168 CPAWIKFVETYYPQ-LLPNISSSKSPISMFAPTIKTWFAKKEGIAPEDIYIVAITPCTAK 226
Query: 249 KLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
K E +R +F Y+ GYRD D V+T EL L E T E D
Sbjct: 227 KFEITREEFHDAANYHHTQGYRDCDKVVTTKELANWLRAENLDLTSVGESD--------- 277
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESP---VVEFKPLRN-PDIREA 353
+ L+ G+G+G G V+ A+R E P +++ + +R +REA
Sbjct: 278 ---YDSLMPRGSGAGVIFGNTGGVMEAAVRSAYYFLTNEQPGDDLLKLEAIRGLAGVREA 334
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-------- 405
+ T D+ +R + +G N + I ++ + YDF+E+M CP GC+ GG Q
Sbjct: 335 SVTIADIPVRVAVVHGTDNARKFIAHMEETKTHYDFVEVMTCPGGCIGGGGQPKHIGEDM 394
Query: 406 --IRNEKVAS--PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
IR +++AS K+ ++ L +N ++ +Y+ + G + + +L+T
Sbjct: 395 QDIRKKRIASLYDKDASMSLRN---------SHDNPHIKAVYEEFYGTPLSTLAEALLHT 445
Query: 462 SYH 464
+YH
Sbjct: 446 TYH 448
>gi|116748289|ref|YP_844976.1| hydrogenase, Fe-only [Syntrophobacter fumaroxidans MPOB]
gi|116697353|gb|ABK16541.1| hydrogenases, Fe-only [Syntrophobacter fumaroxidans MPOB]
Length = 576
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 167/342 (48%), Gaps = 40/342 (11%)
Query: 139 VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAE 197
V ++ +RLG D V D +++E NE L R +GG P+ TS PGW+ +AE
Sbjct: 250 VTGQMVAGLRRLGFDKVFDTDFTADLTILEEGNELLQRLQNGGALPMITSCSPGWIKFAE 309
Query: 198 KSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADF 257
+ E +LP++S KSPQQ+ G+L KT+ A+K G+ PS ++ V++MPC KK E R +
Sbjct: 310 HFYPE-LLPHLSTCKSPQQMFGALAKTYYAQKAGIDPSDVFVVSVMPCTAKKFECIRPEM 368
Query: 258 YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGS 317
+ GY+DVD V+T+ EL + ++ + + P +E++ L TG+
Sbjct: 369 RSS--GYQDVDVVLTSRELGRM---------FKQAGLSMENLPPEEYDAP---LGISTGA 414
Query: 318 G---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFTCGDVTLRFCIANG 369
G G + V+ A+R ++ G+S +EFK R D ++EAT G + +R I NG
Sbjct: 415 GEIFGASGGVMEAALRTVYEVVTGQSLETIEFKECRGLDGVKEATVQVGALPVRVAITNG 474
Query: 370 FRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELETILCD-- 427
N + +++K++ + FIEIM SP T E+ D
Sbjct: 475 LGNARKVLEKIREGSSDHHFIEIMC--------CPGGCVGGGGSPIPTNKEIRLNRIDAV 526
Query: 428 ------LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+A + +N + LYK +L K +L+T Y
Sbjct: 527 YREDERMALRKSHDNPAVAELYKEFLEKPLGHKSHQLLHTHY 568
>gi|56387327|gb|AAV86076.1| uptake hydrogenase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 562
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 192/411 (46%), Gaps = 51/411 (12%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I ++C++C C + I +S+ E K+ ++ N K K +V+ +A P +
Sbjct: 185 IGHSNCVSCGQCAAVCPTGAIVVRSNTE--KLWQDLNNPK-------KRVVVQIA--PAV 233
Query: 127 SLGAKFALSHE---QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+G L E + K+ +R+G D + D + +++E NEF+ + +
Sbjct: 234 RVGLGTQLGEEDGRNAMGKMAAALRRMGFDKIFDTSVGADLTVIEETNEFVSKLQNNEAL 293
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CP WV YAEK++ E ++ +S KSP + +++K H E + V +
Sbjct: 294 PLFTSCCPAWVNYAEKTYPE-LMKNVSSCKSPMGMFAAVLKEHYRE----DDRELVSVAI 348
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE--LATTTLQEEKDGILDWP 300
MPC KK EA+R +F N+ G DVD V+T E V + NE +A + L+ E LD P
Sbjct: 349 MPCSAKKFEAAREEFKND--GVPDVDYVVTTQEF-VNMVNESGIAFSELEPEA---LDRP 402
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV-----VEFKPLRNPD-IREAT 354
+ + ++ G V IR++ E PV F+ +R + ++E T
Sbjct: 403 FQSCSGAGVIF-------GVTGGVTEAVIRKVL-SEQPVPALRSFAFEGVRGMEGVKETT 454
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
D ++ I +G +N N+I+ ++ Y F+E+MACP GC+NG Q +
Sbjct: 455 INALDREIKIAIVSGLKNADNIIKTVRAGEAHYGFVEVMACPGGCINGAGQPFAKAEEKV 514
Query: 415 KETALELETILCDLAKSEPR--ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
K A + D KS R +N ++ LY L DK +L+ Y
Sbjct: 515 KRGA---QLYKVDKMKSISRSDDNPLMDSLYSGIL----KDKTHELLHVHY 558
>gi|357633259|ref|ZP_09131137.1| hydrogenase, Fe-only [Desulfovibrio sp. FW1012B]
gi|357581813|gb|EHJ47146.1| hydrogenase, Fe-only [Desulfovibrio sp. FW1012B]
Length = 421
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 157/341 (46%), Gaps = 25/341 (7%)
Query: 72 CLACSGCIT-SAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
C+ C C+T + + +QS E+ +++ N +V A +LG
Sbjct: 66 CIHCGQCLTHCPQGAIYEEQSWVPEIEARLKDKNVQ----------VVAMPAPAVRYALG 115
Query: 130 AKFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG---PLF 185
F L V K+ ++LG V D A ++ E +EFL R P F
Sbjct: 116 DAFGLPVGAVTTEKMLAALQKLGCSNVWDNEFAADVTIWEEGSEFLARLTKKSDKPLPQF 175
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CPGW YAE + E +LP+ S KSP +MGSL KT+ AEK P+ +Y V++MPC
Sbjct: 176 TSCCPGWQKYAETFYPE-LLPHFSSCKSPIGMMGSLAKTYGAEKAKYDPAKVYTVSIMPC 234
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK E R + N+ G+RD+D I EL +L A L+ +G D E
Sbjct: 235 TAKKYEGLRPE--NDSSGFRDIDATINTRELAYMLKK--AGIDLKAMPEGARDKVMGEST 290
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRF 364
+ +GG L A + + + +FK +R +EAT G ++
Sbjct: 291 GGATIF---GVTGGVMEAALRFAYQAVTNKQPESWDFKAVRGLAGFKEATVDVGGTDVKV 347
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
+ +G + + + +++K + PY FIE MACP GC+ GG Q
Sbjct: 348 AVVHGAKRFKEVCEQVKAGKSPYHFIEFMACPGGCVMGGGQ 388
>gi|159472741|ref|XP_001694503.1| iron hydrogenase [Chlamydomonas reinhardtii]
gi|18026272|gb|AAL23573.1| iron-hydrogenase HydA2 [Chlamydomonas reinhardtii]
gi|29165649|gb|AAM01186.2| Fe-only hydrogenase precursor [Chlamydomonas reinhardtii]
gi|158276727|gb|EDP02498.1| iron hydrogenase [Chlamydomonas reinhardtii]
Length = 505
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 176/419 (42%), Gaps = 79/419 (18%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENE 172
K ++ +A +++ F L+ V KL + LG D V D A +++E E
Sbjct: 88 KVLIAQVAPAVRVAIAESFGLAPGAVSPGKLATGLRALGFDQVFDTLFAADLTIMEEGTE 147
Query: 173 FLDRF---------LSGGGPLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIK 223
L R P+FTS CPGWV EKS+ E I P++S KSPQ +MG+++K
Sbjct: 148 LLHRLKEHLEAHPHSDEPLPMFTSCCPGWVAMMEKSYPELI-PFVSSCKSPQMMMGAMVK 206
Query: 224 THLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE 283
T+L+EK G+ I V++MPC K+ EA R F E G RDVD VIT EL +
Sbjct: 207 TYLSEKQGIPAKDIVMVSVMPCVRKQGEADREWFCVSEPGVRDVDHVITTAELGNIFKER 266
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFK 343
L E D D P + +L GT +GG L A + P +
Sbjct: 267 --GINLPELPDSDWDQPLGLGSGAGVLF--GT-TGGVMEAALRTAYEIVTKEPLPRLNLS 321
Query: 344 PLRNPD-IREATFTC--------------------------------------------- 357
+R D I+EA+ T
Sbjct: 322 EVRGLDGIKEASVTLVPAPGSKFAELVAERLAHKVEEAAAAEAAAAVEGAVKPPIAYDGG 381
Query: 358 -------GDVTLRFCIA--NGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN 408
G L+ +A NG N + LI K+ YDF+EIMACP+GC+ GG Q R+
Sbjct: 382 QGFSTDDGKGGLKLRVAVANGLGNAKKLIGKMVSGEAKYDFVEIMACPAGCVGGGGQPRS 441
Query: 409 EKVASPKETALELETILCDLAK----SEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ K+ + + L DL + EN + LYK +LG + + +L+T Y
Sbjct: 442 ----TDKQITQKRQAALYDLDERNTLRRSHENEAVNQLYKEFLGEPLSHRAHELLHTHY 496
>gi|334340945|ref|YP_004545925.1| hydrogenase Fe-only [Desulfotomaculum ruminis DSM 2154]
gi|334092299|gb|AEG60639.1| hydrogenase, Fe-only [Desulfotomaculum ruminis DSM 2154]
Length = 593
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 183/371 (49%), Gaps = 39/371 (10%)
Query: 110 NENTKTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVE 168
++ K +++ A +++ +F + V KL +RLG D V+D +++E
Sbjct: 223 DDPKKHVLVQTAPAVRVAIAEEFGMEPGTVSTGKLVAALRRLGFDSVMDTDFTADLTIIE 282
Query: 169 LENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA 227
+EF+ R SGG P+ TS PGW+ Y E + + +L ++S KSPQQ+ G+L KT A
Sbjct: 283 EGHEFIQRVTSGGVLPMITSCSPGWIKYIEMYYPD-LLAHLSTCKSPQQMFGALAKTFYA 341
Query: 228 EKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATT 287
EK G+ P I V++MPC KK EA R + + G++DVD V+T EL +L
Sbjct: 342 EKKGIDPGTIVSVSIMPCTAKKFEAQRDELKDS--GHQDVDIVLTTRELARML------- 392
Query: 288 TLQEEKDGILDW---PWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQ----LCPGESPVV 340
++ +DW P +E++ L G V+ A+R L P +
Sbjct: 393 -----REIGIDWDSLPDEEYDAPMGLSTGAAVIFGATGGVMEAAVRTVYEVLTKEPLPDI 447
Query: 341 EFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
P+R + I+EAT GD+ ++ +A+ N + L+ K++ Y FIE+M CP GC
Sbjct: 448 NLTPVRGMEGIKEATLKVGDLDVKVAVAHTLGNARKLLDKIRAGEADYHFIEVMCCPGGC 507
Query: 400 LNGGAQ-------IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKST 452
+ GG Q +R +++A + L L KS EN + +Y+ +LG
Sbjct: 508 IGGGGQPIPTNLEVRLKRIAGTYQADEALP-----LRKS--HENPAITAIYEEFLGEPLG 560
Query: 453 DKGKHMLNTSY 463
++ H+L+T Y
Sbjct: 561 ERSHHLLHTHY 571
>gi|332800412|ref|YP_004461911.1| hydrogenase, Fe-only [Tepidanaerobacter acetatoxydans Re1]
gi|438003802|ref|YP_007273545.1| Periplasmic [Fe] hydrogenase large subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332698147|gb|AEE92604.1| hydrogenase, Fe-only [Tepidanaerobacter acetatoxydans Re1]
gi|432180596|emb|CCP27569.1| Periplasmic [Fe] hydrogenase large subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 659
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 192/413 (46%), Gaps = 40/413 (9%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
IS +C+ C C + +T SH E + ++ + KT+V +A +
Sbjct: 184 ISEVNCVDCGQCAAVCPTGALTIASHMEKVW---------SALYDPQKTVVAQIAPAVRV 234
Query: 127 SLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
SLG +F L K+ G K++G D V D A + +E EFL+R P
Sbjct: 235 SLGEEFGLKPGTPATGKVVGALKKIGFDKVFDTCFAADVTAIEESCEFLERISKNQRLPQ 294
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CP WV Y E + ++ IS +SPQQ+ GSL+K A+ +G +I+ V++MP
Sbjct: 295 FTSCCPAWVKYVELHYPQY-KDNISTCRSPQQMFGSLMKGIYAKAMGTDSENIFVVSIMP 353
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK EA R +F+ G DVD V+T EL ++ ++ + + E
Sbjct: 354 CTAKKSEAKREEFFKN--GIPDVDAVLTTQELARMI------------REAGVVFDEVEE 399
Query: 305 NPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLR-NPDIREATFTCGDV 360
P M L TG G G + V + +R + G+ P +FK + NP+I+ A
Sbjct: 400 MPFDMPLGFATGGGVIFGGSKGVATAVMRVI--GKEP--DFKADKDNPNIKTAEIDYNAR 455
Query: 361 TLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKET 417
++ +G N + L++ L+ YD IE+MAC GC+ GG Q + N S K+
Sbjct: 456 KIKVATVSGLGNAKKLLEDLRAGNKYYDLIEVMACSGGCIGGGGQPQPNSNNIRKSRKQG 515
Query: 418 ALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPKNN 470
E + + P EN ++ LYK LG + K ML+T+Y N + N
Sbjct: 516 LFGHEKL---MQLKSPIENPVIKDLYKDNLGEPGSAKAHAMLHTAYTNRKRIN 565
>gi|423343770|ref|ZP_17321483.1| hydrogenase, Fe-only [Parabacteroides johnsonii CL02T12C29]
gi|409214792|gb|EKN07801.1| hydrogenase, Fe-only [Parabacteroides johnsonii CL02T12C29]
Length = 584
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 188/413 (45%), Gaps = 33/413 (7%)
Query: 66 EISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+I+ + C C C++ + L + + + V+ + + + K ++ A
Sbjct: 177 DIAGSTCSYCGQCVSVCPVNALSGRNTQQPVLDALADPD----------KIVIAQTAPAV 226
Query: 125 VLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR---FLSG 180
+LG F +V K+ + LG D V D A +++E E L R +L G
Sbjct: 227 RTALGRDFGYEPGTLVTGKMVSALRGLGFDYVFDTDFAADLTIMEEGTELLQRIGKYLKG 286
Query: 181 GG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL TS CPGWV + E+ E +L +S KSPQQ+ G++ K++ AEKLGV
Sbjct: 287 DQEVKMPLMTSCCPGWVSFVEQHFPE-LLDNLSTAKSPQQMFGAIAKSYFAEKLGVDRKQ 345
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
I V++MPC KK EASR +F + G DVD I EL L+ A E D
Sbjct: 346 IVVVSIMPCLAKKYEASRPEFAVD--GNPDVDISIYTRELARLI--RYANINFSELPDSD 401
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATF 355
D P E ++ GT +GG A P ++F+ LR + IR AT
Sbjct: 402 FDRPLGESTGAGVIF--GT-TGGVIEAACRTAYELYTKKALPKIDFEELRGLEGIRSATI 458
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE---KVA 412
++ IA+G N + LI+ +K PY IE+MACP GC+ GG Q + +V
Sbjct: 459 DFDGTPIKIGIAHGLGNARKLIEDVKNGTSPYHAIEVMACPGGCIGGGGQPFHRGRMEVL 518
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ AL E L KS EN ++ LY +LG + +L+T Y +
Sbjct: 519 RKRAAALYQEDRSKTLRKSH--ENPYIQALYANYLGEPCGPRAHELLHTHYFD 569
>gi|51244331|ref|YP_064215.1| Fe-center hydrogenase, large subunit [Desulfotalea psychrophila
LSv54]
gi|50875368|emb|CAG35208.1| probable Fe-center hydrogenase, large subunit [Desulfotalea
psychrophila LSv54]
Length = 471
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 165/346 (47%), Gaps = 17/346 (4%)
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
++LG +F + + + KL LG V D A +++E E + R + G G
Sbjct: 129 VALGEEFGMPYGSLTPGKLAAALHALGFTKVYDTNFAADLTIMEEGAELIAR-IGGQGKL 187
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CPGWV + E + + +L ++S KSPQQ+ G+L KT+ A++ G+ P I+ + +
Sbjct: 188 PMFTSCCPGWVKFVEDQYPD-LLEHLSSCKSPQQMAGTLFKTYGAQEAGIAPEKIFSLAV 246
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK E R + GYRDVD VIT EL LL + D D P
Sbjct: 247 MPCTCKKFECERPEMAAS--GYRDVDLVITTRELAQLLKH--VGIDFLALADAEFDNPLG 302
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVT 361
++ + GT +GG L A L P VE +R + +R AT V
Sbjct: 303 CYSGAGNIF--GT-TGGVMEAALRSACEVLTGKPLPSVELDYVRGGEGVRFATVQHEGVE 359
Query: 362 LRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALEL 421
LR IA G +I L+++++ + F+E+M CP GC++GG Q + + E
Sbjct: 360 LRVAIAAGLADIAPLLEQVRAGEADFQFMEVMCCPMGCVSGGGQPKTLLPSQVLEAHAGR 419
Query: 422 ETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L K+ P EN ++ LY+ +LG + +L+T +
Sbjct: 420 RAGLYSHDKALPVRKSHENPEIKKLYEKFLGEPLGHQAHELLHTDH 465
>gi|302335612|ref|YP_003800819.1| hydrogenase, Fe-only [Olsenella uli DSM 7084]
gi|301319452|gb|ADK67939.1| hydrogenase, Fe-only [Olsenella uli DSM 7084]
Length = 587
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 199/414 (48%), Gaps = 47/414 (11%)
Query: 71 DCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
DC C CIT + + ++ E +V R A ++ N TIV +A S G
Sbjct: 187 DCTYCGQCITHCPTGALRERDDTE--RVFR------ALADPNVTTIV-QVAPSVRTSWGD 237
Query: 131 KFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG------- 182
+F L + E + +L + +G D +++ + +++E E L G
Sbjct: 238 EFGLGADEGSLGRLVSALRPMGFDYIVNTDFSADLTIMEEGTELLAHMAREGDKDAAERL 297
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
P+FTS CPGWV + K+H ++ ++S KSPQQ+ G+++K++ A+ LG+ P I+ V++
Sbjct: 298 PMFTSCCPGWVRFV-KAHYPQLVDHVSTSKSPQQMFGAVVKSYYADLLGLDPHGIFSVSI 356
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK EA + N+ G DVD V+T E+ ++ E D + +D
Sbjct: 357 MPCVAKKAEAD-IECMNDACGDPDVDAVLTVREVTRMIRAEHVCV------DALEPSAFD 409
Query: 303 EHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGESPVVE-FKPLRNPD-IREAT 354
E P M GTG+G G V+ A+R + G SP + F+ +R + +EAT
Sbjct: 410 E--PLGM----GTGAGIIFGATGGVMEAALRTAHHIVTGRSPEEDMFERVRGLEGWKEAT 463
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
F ++R +A+G N + L + R YDF+E+MACP GC+ GG Q +
Sbjct: 464 FDLAGTSVRVAVASGLANAKRLCDAVLAGRASYDFVEVMACPGGCVGGGGQ----PIREG 519
Query: 415 KETALELETILCDLAK----SEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYH 464
+E A E +L L K EN ++ Y+ + G + + + +L+T H
Sbjct: 520 EERAGERGQVLYGLDKIAQYRNSYENPSIVRCYEEYFGAPMSKRAEELLHTDQH 573
>gi|326790680|ref|YP_004308501.1| hydrogenase, Fe-only [Clostridium lentocellum DSM 5427]
gi|326541444|gb|ADZ83303.1| hydrogenase, Fe-only [Clostridium lentocellum DSM 5427]
Length = 562
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 186/401 (46%), Gaps = 53/401 (13%)
Query: 67 ISLTDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
IS + C++C C + ++ + + + VI S+ TK IV I P
Sbjct: 185 ISESKCVSCGQCAAVCPTGAIVVKNDTQAIWNVI---------SDPETKVIV---QIAPA 232
Query: 126 LSLGAKFALSHEQ---VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
+ +G +L E V+ K+ +R+G D + D +++E NE L+R
Sbjct: 233 VRVGIDQSLGEENGHNVMGKIIAALRRMGFDEIFDTTTGADLTVLEEANELLERIERKDT 292
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
PLFTS CP WV Y E +H E I +S +SP ++ G+++K H + + V
Sbjct: 293 LPLFTSCCPAWVKYVENNHPELI-SQVSSCRSPMEMFGAVLKEHYSHSR----RKVIVVA 347
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
+MPC KK EA+R + + G DVD V+T EL ++ ++ GI+ +
Sbjct: 348 VMPCTAKKEEAARDELKRD--GIPDVDYVLTTRELIQMV-----------KESGIV---F 391
Query: 302 DEHNPHRMLLVNGTGSG-----GYAHNVLSHAIRQLCPGESPV----VEFKPLRN-PDIR 351
+E P + + G SG G V IR+L +S + F +R ++
Sbjct: 392 NELEPEAVDMPFGVSSGAGVIFGVTGGVTEAVIRRLADDKSTTSLRSIAFNGVRGMAGVK 451
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNE 409
EA G+ L+ I +G +N ++LI +K YDF+E+MACP+GC+ G Q RNE
Sbjct: 452 EAEIPFGENYLKVAIVSGLKNAEDLIIAMKSGEKHYDFVEVMACPTGCVGGAGQPFARNE 511
Query: 410 KVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGK 450
+ A + E + L + +SE EN + LY L GK
Sbjct: 512 EKAIRGKGLYEADR-LSSIKRSE--ENPLIMSLYSGVLKGK 549
>gi|153954875|ref|YP_001395640.1| Fe-only hydrogenase 1 [Clostridium kluyveri DSM 555]
gi|219855329|ref|YP_002472451.1| hypothetical protein CKR_1986 [Clostridium kluyveri NBRC 12016]
gi|146347733|gb|EDK34269.1| Predicted Fe-only hydrogenase 1 [Clostridium kluyveri DSM 555]
gi|219569053|dbj|BAH07037.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 580
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 164/341 (48%), Gaps = 24/341 (7%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
++CL C C+ + +T++ H V + +++ H +++++A ++
Sbjct: 186 SNCLLCGQCVIACPVGALTEKPHISRVQEALKDPKKH----------VIVAMAPSVRAAI 235
Query: 129 GAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + + V K+ + L D + D+ +++E E L+R +GG P+FT
Sbjct: 236 GELFNMGFGKDVTGKIYTALRMLNFDKIFDINFGADMTIMEEATELLERIKNGGPFPMFT 295
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV A+ + E +L +S KSPQQ+ G+ KT+ G+ IY VT+MPC
Sbjct: 296 SCCPAWVRQAQNYYPE-LLENLSSAKSPQQIFGTATKTYYPSISGIEAKDIYTVTIMPCN 354
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHN 305
DKK EA D E G R +D V+T EL +++ A ++ T+L+ D D E++
Sbjct: 355 DKKYEADLTDM--EVNGMRCIDAVLTTRELAKMIKAAKIKFTSLE---DSEADAAMGEYS 409
Query: 306 PHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTLRF 364
++ N +GG L A + +E+ +R I+E++ T
Sbjct: 410 GAGVIFGN---TGGVMEAALRTAKDFAENVDLKDIEYTQIRGLKGIKESSVEISGNTYNI 466
Query: 365 CIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
+ NG N+ + I K Y FIE+MACP GC+NGG Q
Sbjct: 467 AVINGAANLFDFIDSGKIGEKQYHFIEVMACPGGCINGGGQ 507
>gi|379012527|ref|YP_005270339.1| iron hydrogenase HydA1 [Acetobacterium woodii DSM 1030]
gi|375303316|gb|AFA49450.1| iron hydrogenase HydA1 [Acetobacterium woodii DSM 1030]
Length = 583
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 174/367 (47%), Gaps = 19/367 (5%)
Query: 113 TKTIVLSLAIQPVLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELEN 171
+KT+++ A +LG +F V K+ +RLG D V D ++E
Sbjct: 223 SKTVIVQTAPAVRAALGEEFGYPMGTSVTGKMAAALRRLGFDKVFDTDFGADVCIMEEGT 282
Query: 172 EFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKL 230
E + R +GG P+ TS PGW+ + E + E I P++S KSPQ + G+L+K H A+
Sbjct: 283 ELIGRVTNGGVLPMITSCSPGWIKFIETYYPEAI-PHLSSCKSPQNITGALLKNHYAQTN 341
Query: 231 GVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQ 290
+ P + V++MPC KK E R + + G DVD IT EL ++ A
Sbjct: 342 NIDPKDMVVVSIMPCTAKKYEVQREELCTD--GNADVDISITTRELARMIKE--ARILFN 397
Query: 291 EEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD- 349
+ D D + E ++ +GG + L + ++++ +R D
Sbjct: 398 KLPDEDFDDYYGESTGAAVIF---GATGGVMEAAVRTVADVLNKKDIQEIDYQIVRGVDG 454
Query: 350 IREATF-TCGDVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIEIMACPSGCLNGGAQ-I 406
I++A+ D+T+ +A+G NI+ ++++LK L FIE+MACP GC+NGG Q I
Sbjct: 455 IKKASVEVTPDLTVNLVVAHGGANIREVMEQLKAGELADTHFIELMACPGGCVNGGGQPI 514
Query: 407 RNEKVASPKETALELETILCD-----LAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNT 461
+ K + E L D L + +N ++ LY+ +L ++ K H+L+T
Sbjct: 515 VSAKDKMDIDIRTERAKALYDEDANVLTYRKSHQNPSVIRLYEEYLEEPNSPKAHHILHT 574
Query: 462 SYHNIPK 468
Y PK
Sbjct: 575 KYSAKPK 581
>gi|365174572|ref|ZP_09362014.1| hydrogenase, Fe-only [Synergistes sp. 3_1_syn1]
gi|363614589|gb|EHL66076.1| hydrogenase, Fe-only [Synergistes sp. 3_1_syn1]
Length = 565
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 185/398 (46%), Gaps = 37/398 (9%)
Query: 65 VEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+ IS + C+ C C + I VIR N++ K + K +S+ I P
Sbjct: 184 IPISESVCVGCGQCAAVCPTGAI----------VIR-NDSAKVWKALDEKETRVSVQIAP 232
Query: 125 VL--SLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
+ +LG + + E + K+ +R+G + V D +++E +EFL R G
Sbjct: 233 AVRVALGKELGIGDGENAMGKIVAALRRMGFNEVFDTSTGADLTVLEESSEFLARLDEGE 292
Query: 182 G--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
PLFTS CP WV YAEK+ + ++ +S +SP Q+ ++IK H P H
Sbjct: 293 HEMPLFTSCCPAWVKYAEKNDPD-VVSNLSTCRSPMQMFAAVIKEHHKHS----PRKQIH 347
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILD 298
V +MPC KK EA+R +F E DVD V+T E+ +++ + L + L+ E +D
Sbjct: 348 VAVMPCTAKKAEAAREEFRTE--AGPDVDFVLTTQEIIQMIKESGLVFSELEPEA---VD 402
Query: 299 WPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTC 357
P+ + ++ +GG VL I + FK +R D ++EA
Sbjct: 403 MPFGTMSGAGVIF---GVTGGVTEAVLRRIISDKSAAALQAIAFKGIRGADGVKEAAVKY 459
Query: 358 GDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNEKVASPK 415
GD L+ + +G N LI+++ R YDF+E+MACP GC+ G Q + E AS +
Sbjct: 460 GDRELKIAVVSGLGNAHELIKRI-RNGEHYDFVEVMACPGGCVCGAGQPFVLKEGKAS-R 517
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTD 453
L + + +SE EN + LY L G+ D
Sbjct: 518 GKGLYSADKMSSIKRSE--ENPLMMALYSGLLKGRVHD 553
>gi|320527800|ref|ZP_08028968.1| putative ferredoxin hydrogenase [Solobacterium moorei F0204]
gi|320131737|gb|EFW24299.1| putative ferredoxin hydrogenase [Solobacterium moorei F0204]
Length = 487
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 193/409 (47%), Gaps = 39/409 (9%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C+ S + ++S E + KA+ + K +V A + LG +
Sbjct: 66 CINCGQCVVSCPFDSLNERS---------ELDGVKAAIQDPEKVVVFQTAPAVRVGLGEE 116
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTSE 188
F + V K+ ++LG D VLD +++E +E ++R ++G G P +TS
Sbjct: 117 FGMPAGTFVQGKMITALRKLGGDYVLDTNFGADMTIMEEASELIERVINGNGQLPQYTSC 176
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP WV +AE + E I P++S KSP + + KT+ A+K + P I V + PC K
Sbjct: 177 CPAWVKFAETFYPELI-PHLSTAKSPIAMQAATEKTYFAKKNNIDPKQIVSVCVTPCTAK 235
Query: 249 KLEASR------ADFYNEELGYRDVDCVITAVELEVLLAN-ELATTTLQEEKDGILDWPW 301
K E R A+++NEE RD D IT EL + EL L+ DG D
Sbjct: 236 KAEIRRPEMNSSAEYWNEE-EMRDSDYCITVRELARWIREAELDFANLE---DGKFDPLM 291
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRN-PDIREATFTCG 358
E + ++ N +GG + + A + + E P ++ F +R + REA G
Sbjct: 292 GEASGGGIIFAN---TGGVMESAMRSAYKFVTKDEVPANLIRFDAIRGFENSREADVQIG 348
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE--KVASPKE 416
D L +G N + + +K YDFIE+MACP GC+ GG R++ +V + KE
Sbjct: 349 DKVLHVAAIHGTGNFRKFYEHMKETGTHYDFIEVMACPGGCIGGGGMPRHKLPQVKAAKE 408
Query: 417 TALELETILCDLAKSEP----RENATLEHLYKAWLGGKSTDKGKHMLNT 461
+ + L + K +P ++N ++ LY + G ++K HML+T
Sbjct: 409 SRI---ASLYERDKLKPIKISQDNPEIQLLYNEFYGAPLSEKAHHMLHT 454
>gi|182413362|ref|YP_001818428.1| hydrogenase, Fe-only [Opitutus terrae PB90-1]
gi|177840576|gb|ACB74828.1| hydrogenase, Fe-only [Opitutus terrae PB90-1]
Length = 581
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 194/431 (45%), Gaps = 45/431 (10%)
Query: 56 NGREEKLKKVEISLTDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTK 114
N R + ++ + C+ C C + ++ + V +R+ + K
Sbjct: 173 NTRMAPAGDITLAESPCVKCGQCSAHCPTGAIVEKDETATVWSALRDED----------K 222
Query: 115 TIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEF 173
V+ +A +++G F L + KL +RLG V D A ++VE +EF
Sbjct: 223 ICVVQIAPSVRVTVGEAFGLPPGTNLTKKLYSALRRLGFKAVFDTNFAADVTIVEEASEF 282
Query: 174 LDRFLSGGGPL--FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
++RF GPL TS CP W + EK H +FI + S KSPQQ++G L KT+ A+K G
Sbjct: 283 VERFAHKRGPLPLITSCCPSWTDHMEKRHYDFIDNF-STAKSPQQMLGVLAKTYYAQKAG 341
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQE 291
V PS ++ V++MPC KK E SR + + G+ DVD V+T EL +L
Sbjct: 342 VDPSKLFMVSIMPCTAKKYELSRTEEMHAS-GFADVDVVLTTRELARML----------- 389
Query: 292 EKDGILDWPWDEHNPHRML-LVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPL 345
++ GI + P +L +G G +GG + A + VE +
Sbjct: 390 KQSGIEFLALPDAEPDSILGSYSGAGTIFGATGGVMEAAVRTAYHYATGKKLKNVELTAV 449
Query: 346 RN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKR-----LPYDFIEIMACPSGC 399
R ++E +R +A+G N++ ++++++ R PY FIE+MACP GC
Sbjct: 450 RGLAGVKEGEIDINGAKVRVAVAHGLANVEQVLERVREARKAGKETPYHFIEVMACPGGC 509
Query: 400 LNGGAQ---IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGK 456
+ GG Q + NE+ + + D EN + +Y+ +LG + K
Sbjct: 510 IGGGGQPYGVDNERRMKRIAGLYQDDR---DRTVRYSHENPEVVQVYRDFLGKPLSGKAH 566
Query: 457 HMLNTSYHNIP 467
+L+T Y P
Sbjct: 567 ELLHTRYTARP 577
>gi|218260394|ref|ZP_03475733.1| hypothetical protein PRABACTJOHN_01396 [Parabacteroides johnsonii
DSM 18315]
gi|218224548|gb|EEC97198.1| hypothetical protein PRABACTJOHN_01396 [Parabacteroides johnsonii
DSM 18315]
Length = 596
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 188/413 (45%), Gaps = 33/413 (7%)
Query: 66 EISLTDCLACSGCITSAE-SVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+I+ + C C C++ + L + + + V+ + + + K ++ A
Sbjct: 189 DIAGSTCSYCGQCVSVCPVNALSGRNTQQPVLDALADPD----------KIVIAQTAPAV 238
Query: 125 VLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR---FLSG 180
+LG F +V K+ + LG D V D A +++E E L R +L G
Sbjct: 239 RTALGRDFGYEPGTLVTGKMVSALRGLGFDYVFDTDFAADLTIMEEGTELLQRIGKYLKG 298
Query: 181 GG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSH 236
PL TS CPGWV + E+ E +L +S KSPQQ+ G++ K++ AEKLGV
Sbjct: 299 DQEVKMPLMTSCCPGWVSFVEQHFPE-LLDNLSTAKSPQQMFGAIAKSYFAEKLGVDRKQ 357
Query: 237 IYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGI 296
I V++MPC KK EASR +F + G DVD I EL L+ A E D
Sbjct: 358 IVVVSIMPCLAKKYEASRPEFAVD--GNPDVDISIYTRELARLI--RYANINFAELPDSN 413
Query: 297 LDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATF 355
D P E ++ GT +GG A P ++F+ LR + IR AT
Sbjct: 414 FDRPLGESTGAGVIF--GT-TGGVIEAACRTAYELYTKKALPKIDFEELRGLEGIRSATI 470
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNE---KVA 412
++ IA+G N + LI+ +K PY IE+MACP GC+ GG Q + +V
Sbjct: 471 DFDGTPIKIGIAHGLGNARKLIEDVKNGTSPYHAIEVMACPGGCIGGGGQPFHRGRMEVL 530
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ AL E L KS EN ++ LY +LG + +L+T Y +
Sbjct: 531 RKRAAALYQEDRSKTLRKSH--ENPYIQALYANYLGEPCGPRAHELLHTHYFD 581
>gi|401680236|ref|ZP_10812158.1| [FeFe] hydrogenase, group A [Veillonella sp. ACP1]
gi|400218732|gb|EJO49605.1| [FeFe] hydrogenase, group A [Veillonella sp. ACP1]
Length = 489
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 188/411 (45%), Gaps = 34/411 (8%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + I ++S +EV I + N K +V A + LG
Sbjct: 58 CIHCGQCASICPFDSINERSEIDEVKAAIADPN----------KIVVFQTAPAVRVGLGE 107
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTS 187
+F L V K+ ++LG D +LD +++E +E L+R ++ P FTS
Sbjct: 108 EFGLDAGTFVEGKMVAALRKLGGDYILDTNFGADMTIMEEASELLERVINSDAVLPQFTS 167
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + EF LP +S KSP + KT+ AEK+G+ I V + PC
Sbjct: 168 CCPAWVKFAETFYPEF-LPNLSTAKSPIAMQAPTQKTYFAEKMGLDAKQIVAVAVTPCTA 226
Query: 248 KKLEASRADFYNEELGY------RDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R D N Y RD D IT EL L E E +D D
Sbjct: 227 KKFEIRR-DEMNSSAEYWDVPEMRDTDYCITTRELAKWLRAE--EINFDELEDSAFDPLM 283
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRNPD-IREATFTCG 358
E + ++ N +GG + A + ++P ++ F+ +R D REA G
Sbjct: 284 GEASGGGIIFGN---TGGVMEAAMRAAYKLATGEDAPQTLIPFEAIRGMDGAREADVVIG 340
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
D TL +G N++ I++++ + + YDFIE+MAC GC+ GG Q R + + K
Sbjct: 341 DKTLHVAAVHGTGNLRKFIERMRAENIHYDFIEVMACRGGCIGGGGQPRVKLPMADKARE 400
Query: 419 LELETILCDLAKSEPR---ENATLEHLYKAWLGGKS-TDKGKHMLNTSYHN 465
+ ++ A+ + + +N ++ LY + GK + K HML+T++ N
Sbjct: 401 ARIASLYTRDAEVQVKAACDNPDIQKLYAEFFDGKPMSHKAHHMLHTTFVN 451
>gi|410462879|ref|ZP_11316431.1| hydrogenase, Fe-only [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409984006|gb|EKO40343.1| hydrogenase, Fe-only [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 421
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 161/362 (44%), Gaps = 26/362 (7%)
Query: 49 GAYIQETNGREEKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKAS 108
GA + ET G K+ + C+ C C+T + I E + + E A
Sbjct: 48 GAIVGET-GEPHKV----VDPAACINCGQCLTHCPTSAIY-----ETVSFVPEILAKL-- 95
Query: 109 SNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAK-LCGFFKRLGVDLVLDVGIAHCFSLV 167
++N K I + A +LG F L V + ++LG V D ++
Sbjct: 96 KDKNVKVIAMP-APAVRYALGDPFGLPLGAVTTDHMLSALRKLGFSHVWDNEFTADVTIW 154
Query: 168 ELENEFLDRFLSGGG---PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKT 224
E +E L R P FTS CPGW YAE + E +LP+ S KSP +MG L KT
Sbjct: 155 EEGSELLARITKKQDKPLPQFTSCCPGWQKYAETFYPE-LLPHFSSCKSPIGMMGPLAKT 213
Query: 225 HLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANEL 284
+ A++LG P +Y V++MPC KK E R + + G+RD+D I EL +L
Sbjct: 214 YGAKELGYDPKSVYTVSIMPCTAKKFEGMRPEMHAS--GFRDIDATINTRELAYMLKK-- 269
Query: 285 ATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKP 344
A L + DG D E + SGG L A + L +FK
Sbjct: 270 AGIDLAKTPDGQRDALMGESTGGATIF---GVSGGVMEAALRFAYQALTQKAPESWDFKV 326
Query: 345 LRN-PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGG 403
+R I+EAT +R + NG +N + +++K + PY F+E MACP GC+ GG
Sbjct: 327 VRGLGGIKEATVNIAGTDVRVAVVNGAKNFARVCEQVKTGKSPYHFVEFMACPGGCVMGG 386
Query: 404 AQ 405
Q
Sbjct: 387 GQ 388
>gi|429760989|ref|ZP_19293432.1| hydrogenase, Fe-only [Veillonella atypica KON]
gi|429175888|gb|EKY17303.1| hydrogenase, Fe-only [Veillonella atypica KON]
Length = 489
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 188/411 (45%), Gaps = 34/411 (8%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + I ++S +EV I + N K +V A + LG
Sbjct: 58 CIHCGQCASICPFDSINERSEIDEVKAAIADPN----------KIVVFQTAPAVRVGLGE 107
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTS 187
+F L V K+ ++LG D +LD +++E +E L+R ++ P FTS
Sbjct: 108 EFGLDAGTFVEGKMVAALRKLGGDYILDTNFGADMTIMEEASELLERVINSDSVLPQFTS 167
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + EF LP +S KSP + KT+ AEK+G+ I V + PC
Sbjct: 168 CCPAWVKFAETFYPEF-LPNLSTAKSPIAMQAPTQKTYFAEKMGLDAKQIVAVAVTPCTA 226
Query: 248 KKLEASRADFYNEELGY------RDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R D N Y RD D IT EL L E E +D D
Sbjct: 227 KKFEIRR-DEMNSSAEYWDVPEMRDTDYCITTRELAKWLRAE--EINFDELEDSAFDPLM 283
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRNPD-IREATFTCG 358
E + ++ N +GG + A + ++P ++ F+ +R D REA G
Sbjct: 284 GEASGGGIIFGN---TGGVMEAAMRAAYKLATGEDAPQTLIPFEAIRGMDGAREADVVIG 340
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
D TL +G N++ I++++ + + YDFIE+MAC GC+ GG Q R + + K
Sbjct: 341 DKTLHVAAVHGTGNLRKFIERMRAENIHYDFIEVMACRGGCIGGGGQPRVKLPMADKARE 400
Query: 419 LELETILCDLAKSEPR---ENATLEHLYKAWLGGKS-TDKGKHMLNTSYHN 465
+ ++ A+ + + +N ++ LY + GK + K HML+T++ N
Sbjct: 401 ARIASLYTRDAEVQVKAACDNPDIQKLYAEFFDGKPMSHKAHHMLHTTFVN 451
>gi|323485112|ref|ZP_08090465.1| hydrogenase [Clostridium symbiosum WAL-14163]
gi|323693507|ref|ZP_08107713.1| hydrogenase [Clostridium symbiosum WAL-14673]
gi|355629375|ref|ZP_09050371.1| hypothetical protein HMPREF1020_04450 [Clostridium sp. 7_3_54FAA]
gi|323401668|gb|EGA94013.1| hydrogenase [Clostridium symbiosum WAL-14163]
gi|323502429|gb|EGB18285.1| hydrogenase [Clostridium symbiosum WAL-14673]
gi|354819137|gb|EHF03588.1| hypothetical protein HMPREF1020_04450 [Clostridium sp. 7_3_54FAA]
Length = 682
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 196/439 (44%), Gaps = 63/439 (14%)
Query: 72 CLACSGCITSAESVLITQQ-SHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C IT++ + +V + +R+ K ++ + + ++LG
Sbjct: 57 CINCGQCANVCPVSSITEKYEYRDVREAVRDPE----------KIVIFNTSPSVRIALGE 106
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FTS 187
+F + V K+ ++LG VLD A +++E +E ++R PL FTS
Sbjct: 107 EFDMEDGSFVQGKMVALLRKLGASYVLDTNFAADLTIMEEASELIERITKKNRPLPQFTS 166
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV YAE H + +LP++S KSP + G +KT+ A+K+G++P I +V + PC
Sbjct: 167 CCPSWVKYAEIYHPD-MLPHLSTAKSPIGMQGPTVKTYFAKKMGLNPEKIVNVAVTPCTA 225
Query: 248 KKLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E R + Y G RD+D VIT EL + E G+ D +D
Sbjct: 226 KKFEIRREEMSAAAEYLGIPGMRDMDYVITTRELAIWAREEAIDFA------GLADSSYD 279
Query: 303 EHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVV--EFKPLRN-PDIREAT 354
M +G G +GG L A + ++P V + +P+R D++EA
Sbjct: 280 ----RLMGEASGAGVIFGNTGGVMEAALRTAYETITKQKAPAVLYDLEPVRGMEDVKEAE 335
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMAC----------PSGCLNGGA 404
+ + + G + I+++K Y FIE+M C P G L G
Sbjct: 336 VVIEGLKVNIAVIYGTKAASKFIERIKEGGKEYHFIEVMTCPGGCIGGGGQPKGTLQKGD 395
Query: 405 QIRNEKVAS--PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTS 462
++R +++ +++ +EL T EN + LY+ + ++ + ML+T
Sbjct: 396 ELRKKRIEGLYRRDSGMELRT---------SHENKEIIELYREFYKKPLSELAEQMLHTG 446
Query: 463 YHNIPKN----NIALNVKW 477
Y + ++ N++ +VK+
Sbjct: 447 YRDRSEDLGGKNMSSSVKY 465
>gi|119610202|gb|EAW89796.1| hCG30379, isoform CRA_f [Homo sapiens]
Length = 247
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 105/185 (56%), Gaps = 6/185 (3%)
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGI 160
+ N K ++++ K +V+S+ Q + AKF LS +LCGF K LGV V D I
Sbjct: 49 QENGEKCDTSKH-KVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTI 107
Query: 161 AHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
A FS++E + EF+ R+ P+ TS CPGWV YAE+ G I ++ KSPQ
Sbjct: 108 AADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAERVLGRPITAHLCTAKSPQ 167
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE 275
QVMGSL+K + A + + P I+HV + PCYDKKLEA + G R DCV+T+ E
Sbjct: 168 QVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESLPPALHGSRGADCVLTSGE 227
Query: 276 LEVLL 280
+ ++
Sbjct: 228 IAQIM 232
>gi|166032054|ref|ZP_02234883.1| hypothetical protein DORFOR_01756 [Dorea formicigenerans ATCC
27755]
gi|166027777|gb|EDR46534.1| hydrogenase, Fe-only [Dorea formicigenerans ATCC 27755]
Length = 582
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 190/397 (47%), Gaps = 38/397 (9%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I+ TDC+ C C + I+ +++ +V+ A ++++T ++ +A +
Sbjct: 195 IAQTDCVNCGQCRVVCPTGAISIKTNIDVV--------WDALADKDT-IVIAQIAPAVRV 245
Query: 127 SLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
+ G +F + E V+ KL G RLG D V D +++E EF++RF +G PL
Sbjct: 246 AAGEEFGIPKGENVMGKLVGVLHRLGFDEVYDTAYGADLTVMEESKEFMERFNAGENLPL 305
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CP WV + E + EF+ P++S +SPQQ+ G++++ + + V++MP
Sbjct: 306 FTSCCPAWVKFCENRYPEFV-PHLSSCRSPQQMFGAVVREYYKNPENNAGKKLVSVSIMP 364
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK E R + ++ G +D+D V+T EL ++ ++ GI+ +D+
Sbjct: 365 CTAKKEEILRPE--SKTNGRQDIDYVLTTTELISMI-----------KRAGIM---FDQV 408
Query: 305 NPHRMLLVNGTGSG-----GYAHNVLSHAIRQLCPG--ESPVVEFKP--LRNPD-IREAT 354
+ G GSG G V +R++ G + + E K +R D I+E
Sbjct: 409 EIESADVPFGIGSGAGVIFGVTGGVTEAVLRKITQGHKRADMEELKSSGVRGDDGIKEIV 468
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASP 414
+ ++ I +G N L++K+K + YDF+E+MAC GC+ GG Q + +
Sbjct: 469 YDYNGKEIKAAIVSGLANADQLLKKIKSGEIHYDFVEVMACRRGCVMGGGQPLDAGAHTR 528
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGKS 451
+ L + + EN ++ LY+ L GK+
Sbjct: 529 EARMQGLYKADVNTQIKKSDENPMVQSLYEGLLKGKT 565
>gi|323141449|ref|ZP_08076338.1| rubredoxin [Phascolarctobacterium succinatutens YIT 12067]
gi|322414029|gb|EFY04859.1| rubredoxin [Phascolarctobacterium succinatutens YIT 12067]
Length = 641
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 190/410 (46%), Gaps = 35/410 (8%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C+ C C IT+ + E KA+ + K +++S + ++LG +
Sbjct: 16 CIHCGQCANVCPVGSITE---------VYEYPEVKAAVQDKDKIVIVSTSPSVRVALGEE 66
Query: 132 FALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG---PLFTS 187
F + V K+ + LGVD VLD A ++VE +E L R P FTS
Sbjct: 67 FGMPKGAFVQGKMVALLRALGVDYVLDTNFAADLTIVEEASELLARIKGETDKPLPQFTS 126
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + E +LP++S KSP + G IKT+ A+K+G+ P I +V L PC
Sbjct: 127 CCPAWVKFAETYYPE-LLPHVSTAKSPIGMQGPTIKTYFAQKMGIDPRKIVNVALTPCTA 185
Query: 248 KKLEASRADF--YNEELG---YRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E R + ++LG RD+D VIT EL L A E A +D D
Sbjct: 186 KKFEIRREEMNAAGQKLGIAELRDMDNVITTREL-ALWAKE-AGIDFTSLEDSDFDKFMG 243
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP---VVEFKPLRNPD-IREATFTCG 358
E + ++ N +GG L A L GE P +++ +P+R D +REA+
Sbjct: 244 EASGAGVIFGN---TGGVMEAALRTAYAYLT-GEQPPKEILKLEPVRGYDGLREASVEIA 299
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+ + +G N++ LI K Y FIE+M CP GC+ GG Q ++ +
Sbjct: 300 GRVINVAVVHGTENVRKLIAGGIEK---YHFIEVMTCPGGCIGGGGQPKDFAYDADAARK 356
Query: 419 LELETILCDLAKSE---PRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+E + A+ E EN ++ LY+ + +D + ML+T+Y +
Sbjct: 357 ARIEGLYERDAEMELHLSHENKEIQQLYQEFYDTPLSDMAEAMLHTAYQD 406
>gi|313893206|ref|ZP_07826783.1| ferredoxin hydrogenase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442559|gb|EFR60974.1| ferredoxin hydrogenase [Veillonella sp. oral taxon 158 str. F0412]
Length = 488
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 188/410 (45%), Gaps = 32/410 (7%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + I ++S +EV I + N K +V A + LG
Sbjct: 58 CIHCGQCASICPFDSINERSEIDEVKAAIADPN----------KIVVFQTAPAVRVGLGE 107
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTS 187
+F L V K+ ++LG D +LD +++E +E L+R ++ P FTS
Sbjct: 108 EFGLDAGTFVEGKMVAALRKLGGDYILDTNFGADMTIMEEASELLERVINSDAVLPQFTS 167
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + EF LP +S KSP + KT+ AEK+G+ I V + PC
Sbjct: 168 CCPAWVKFAETFYPEF-LPNLSTAKSPIAMQAPTQKTYFAEKMGLDAKQIVAVAVTPCTA 226
Query: 248 KKLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E R + Y + RD D IT EL L E + +D D
Sbjct: 227 KKFEIRREEMNSSAEYWDVPEMRDTDYCITTRELAKWLRAE--EINFDDLEDSAFDPLMG 284
Query: 303 EHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRNPD-IREATFTCGD 359
E + ++ N +GG + A + ++P ++ F+ +R D REA GD
Sbjct: 285 EASGGGIIFGN---TGGVMEAAMRAAYKLATGEDAPQTLIPFEAIRGMDGAREADVVIGD 341
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETAL 419
TL +G N++ I++++ + + YDFIE+MAC GC+ GG Q R + + K
Sbjct: 342 KTLHVAAVHGTGNLRKFIERMRAENIHYDFIEVMACRGGCIGGGGQPRVKLPMADKAREA 401
Query: 420 ELETILCDLAKSEPR---ENATLEHLYKAWLGGKS-TDKGKHMLNTSYHN 465
+ ++ A+ + + +N ++ LY + GK + K HML+T+Y N
Sbjct: 402 RIASLYTRDAEVQVKASCDNPDIQKLYAEFFDGKPMSHKAHHMLHTTYVN 451
>gi|302391065|ref|YP_003826885.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Acetohalobium arabaticum DSM 5501]
gi|302203142|gb|ADL11820.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Acetohalobium arabaticum DSM 5501]
Length = 583
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 193/424 (45%), Gaps = 48/424 (11%)
Query: 62 LKKVEISLTDCLACS-----GCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTI 116
L + EI+ T+C C+ G IT + +V + + + H +
Sbjct: 192 LPQSEINCTNCGQCAVVCPVGAITEVSEI-------SDVWDALEDEDQH----------V 234
Query: 117 VLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLD 175
V+ +A S+G +F + +V KL + LG D + +++E NE L
Sbjct: 235 VVQVAPAIQASIGEEFGMEPGTIVTGKLVTALQELGFDKIFSTEFTADLTIMEEGNELLK 294
Query: 176 RFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
R P FTS CPGWV + E ++ E+ L +S KSPQQ+ +L KT+ AE+ + P
Sbjct: 295 RIKGQKKLPQFTSCCPGWVKFCEHNYPEY-LDNLSTAKSPQQMFSTLAKTYYAEQEDIDP 353
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKD 294
I+ V++MPC KK E +R + + G++D D V+T E A + +Q K
Sbjct: 354 EDIFTVSVMPCTAKKFEKNREEMADS--GHQDTDAVLTTREA----ARMIKEMGIQFHK- 406
Query: 295 GILDWPWDEHNPHRMLLVNGTGS-----GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD 349
+ D +D+ M G G+ GG L A L E P ++ +R D
Sbjct: 407 -LTDSKYDK----MMGAHTGAGTIFGTTGGVMEAALRTAYEVLTDDELPRLDLTEVRGMD 461
Query: 350 -IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--- 405
IR+A ++ + +G +N +L+ K++ + YDF+E+MACP GC+ GG Q
Sbjct: 462 GIRDANVQLNGDNVKVAVVHGLKNAADLLDKIEAGEIEYDFVEVMACPGGCIGGGGQPFA 521
Query: 406 IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
V + + AL + KS EN + LY+ +LG + H+L+TSY
Sbjct: 522 STTMDVKAKRAEALYQTDKANTIRKS--HENPQIIKLYEDYLGEPLSSDSHHLLHTSYQE 579
Query: 466 IPKN 469
KN
Sbjct: 580 RSKN 583
>gi|302392631|ref|YP_003828451.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Acetohalobium arabaticum DSM 5501]
gi|302204708|gb|ADL13386.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit
[Acetohalobium arabaticum DSM 5501]
Length = 601
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 190/417 (45%), Gaps = 48/417 (11%)
Query: 70 TDCLACSGCITSAES-VLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C+ C CI + L Q ++V + ++TK +V+ A +++
Sbjct: 187 TPCITCGQCIMVCPTGALHGQDDKQKVWDAL----------ADDTKHVVIQTAPAIRVTI 236
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G F + V KL KR+G D V D ++E E ++R SG P FT
Sbjct: 237 GEMFGMEVGSLVTGKLVSALKRVGFDRVFDDCFGADVVVMEEGRELMERLESGKDLPQFT 296
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CPGWV + E + +L +S KSPQQV G+L KT+ AEK G+ P +I+ V+ MPC
Sbjct: 297 SCCPGWVKFCESFYPS-LLDNLSSCKSPQQVFGALAKTYYAEKAGIDPDNIFSVSTMPCV 355
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA R + ++ G +DVD V+T EL E++ + L E++ +DE
Sbjct: 356 AKKYEAQRPEM--DDSGRQDVDAVLTTRELGEMIKQIGIDIENLPEQE-------YDEP- 405
Query: 306 PHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCG-D 359
M G G +GG L +L E + +R+ D EA D
Sbjct: 406 ---MGYATGAGVIFGSTGGVMEATLRTVYEKLTGERLEDFELQKVRSQDFNEAEVKLDED 462
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE--- 416
++ +A G N + LI ++ YDF+E+MACP+ G + + S ++
Sbjct: 463 RSINVAVARGTGNARKLIHRVLSGEADYDFVEVMACPA---GGCVGGGGQPIYSGRDRWA 519
Query: 417 TALELETILCD-LAKSEPR-------ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+E D L KS+ R EN ++ LY ++L +K + +L+TSY +
Sbjct: 520 RMVEDRVARADGLLKSDGRKDIKVAHENPFVKELYDSFLEKPHGEKSQKLLHTSYTD 576
>gi|322419375|ref|YP_004198598.1| hydrogenase, Fe-only [Geobacter sp. M18]
gi|320125762|gb|ADW13322.1| hydrogenase, Fe-only [Geobacter sp. M18]
Length = 586
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 193/413 (46%), Gaps = 35/413 (8%)
Query: 66 EISLTD--CLACSGCITSAESVLITQQSHE-EVMKVIRENNAHKASSNENTKTIVLSLAI 122
E++L D C C C+ + ++ H V++ + + + K +V+ A
Sbjct: 188 EMNLADSGCTNCGQCVAVCPVGALAEKDHTWSVIEALADPD----------KVVVVQTAP 237
Query: 123 QPVLSLGAKFAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR---FL 178
+LG + + V K+ + LG D V D A +++E +EFLDR FL
Sbjct: 238 AVRAALGEDLGMEAGTLVTGKMVSALRSLGFDYVFDTDFAADLTIMEEGSEFLDRLTRFL 297
Query: 179 SGGG----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHP 234
+G P+ TS CP WV + E + +L S KSPQQ+ G++ KT+ AEKLG+
Sbjct: 298 AGDQSVKLPIMTSCCPAWVKFFEHQFPD-LLDVPSTAKSPQQMFGAIAKTYFAEKLGIPR 356
Query: 235 SHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKD 294
+ V++MPC KK EA+R +F + G RDVD V++ EL L+ + + D
Sbjct: 357 EKMVVVSIMPCLAKKYEAARPEFSVD--GNRDVDVVLSTRELARLVKS--SNIDFVSLPD 412
Query: 295 GILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREA 353
G D P E ++ +GG + A E P ++F LR + +R A
Sbjct: 413 GDFDLPLGESTGAAVIF---GATGGVLEAAVRTAYELATNKELPKLDFSELRGMEGVRVA 469
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEK 410
GD L IA+ N + L+ ++ + + IEIM+CP GC+ GG Q +E
Sbjct: 470 KIPVGDQVLNVGIAHELGNARKLLDMVREGKEQFHAIEIMSCPGGCIGGGGQPYHHGDET 529
Query: 411 VASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ + A+ E + L KS +N + LY+ +LG +K H+L+T Y
Sbjct: 530 ILEKRTKAIYREDVNKPLRKSH--QNPYILDLYENFLGKPLGEKAHHLLHTHY 580
>gi|238018759|ref|ZP_04599185.1| hypothetical protein VEIDISOL_00617 [Veillonella dispar ATCC 17748]
gi|237864525|gb|EEP65815.1| hypothetical protein VEIDISOL_00617 [Veillonella dispar ATCC 17748]
Length = 489
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 188/411 (45%), Gaps = 34/411 (8%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + I ++S +EV I + N K +V A + LG
Sbjct: 58 CIHCGQCASICPFDSINERSEIDEVKAAIADPN----------KIVVFQTAPAVRVGLGE 107
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTS 187
+F L V K+ ++LG D +LD +++E +E L+R ++ P FTS
Sbjct: 108 EFGLDAGTFVEGKMVAALRKLGGDYILDTNFGADMTIMEEASELLERVINSDSVLPQFTS 167
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + EF LP +S KSP + KT+ AEK+G+ I V + PC
Sbjct: 168 CCPAWVKFAETFYPEF-LPNLSTAKSPIAMQAPTQKTYFAEKMGLDAKQIVAVAVTPCTA 226
Query: 248 KKLEASRADFYNEELGY------RDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R D N Y RD D IT EL L E E +D D
Sbjct: 227 KKFEIRR-DEMNSSAEYWDVPEMRDTDYCITTRELAKWLRAE--EINFDELEDSAFDPLM 283
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRNPD-IREATFTCG 358
E + ++ N +GG + A + ++P ++ F+ +R D REA G
Sbjct: 284 GEASGGGIIFGN---TGGVMEAAMRAAYKLATGEDAPQTLIPFEAIRGMDGAREADVVIG 340
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
D TL +G N++ I++++ + + YDFIE+MAC GC+ GG Q R + + K
Sbjct: 341 DKTLHVAAVHGTGNLRKFIERMRAENIHYDFIEVMACRGGCIGGGGQPRVKLPMADKARE 400
Query: 419 LELETILCDLAKSEPR---ENATLEHLYKAWLGGKS-TDKGKHMLNTSYHN 465
+ ++ A+ + + +N ++ LY + GK + K HML+T++ N
Sbjct: 401 ARIASLYTRDAEVKVKAACDNPDIQKLYAEFFDGKPMSHKAHHMLHTTFVN 451
>gi|210621816|ref|ZP_03292845.1| hypothetical protein CLOHIR_00790 [Clostridium hiranonis DSM 13275]
gi|210154580|gb|EEA85586.1| hypothetical protein CLOHIR_00790 [Clostridium hiranonis DSM 13275]
Length = 578
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 199/413 (48%), Gaps = 39/413 (9%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+I +DC C CIT + ++ ++V KV + + K V+ +A
Sbjct: 182 KIEESDCALCGQCITHCPVGALRER--DDVDKVFD-------ALADPEKITVVQVAPAVR 232
Query: 126 LSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-- 182
+ G L E V +L +++G + + D + +++E +EF+++ +
Sbjct: 233 AAWGESLGLEREAATVKRLVAALRKMGFNYIFDTTFSADLTIMEEGSEFVEKLKNKENNK 292
Query: 183 -PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVT 241
P+FTS CPGWV Y KSH ++ +S KSPQQ+ G++ K++ AE L V P IY ++
Sbjct: 293 FPMFTSCCPGWVRYM-KSHYPDMVDLLSTSKSPQQMFGAITKSYYAELLDVSPDKIYSIS 351
Query: 242 LMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLL-ANELATTTLQEEKDGILDWP 300
+MPC KK E N+ +DVD VIT E++ ++ A + L+EE+ D P
Sbjct: 352 IMPCIAKKHECDIPTI-NDTEADKDVDVVITTREVDRMIRAEHIDVANLEEEE---FDMP 407
Query: 301 WDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPD-IRE 352
L GTG+G G V+ A+R L GE+P + FK +R D +E
Sbjct: 408 ----------LGVGTGAGVIFGATGGVMEAALRSAYYLVTGENPDPDAFKEVRGMDGWKE 457
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
+ ++ + +G +N LIQ ++ + YDF+E+MACP GC GG Q +
Sbjct: 458 SQIEINGTVVKTAVTSGLKNTDKLIQAIRNGEVEYDFVEVMACPGGCSGGGGQPIHLGQT 517
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
S + L +L S EN ++ +Y+ +LG ++K +L+T + +
Sbjct: 518 SNRVDNLYKLDKEANLRFS--HENPSIVKVYEDYLGAPMSEKAHKLLHTDHES 568
>gi|406980693|gb|EKE02262.1| hypothetical protein ACD_20C00406G0007 [uncultured bacterium]
Length = 597
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 199/424 (46%), Gaps = 60/424 (14%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHK---ASSNENTKTIVLSLAIQPVLSL 128
C+ C CI + +T E +A K A+ ++ TK +V+ A +L
Sbjct: 196 CVMCGQCINRCPTGALT------------EKDATKDVWAALDDPTKHVVVQTAPAIRAAL 243
Query: 129 GAKFALS-HEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRF---LSGGG-- 182
F + E+V K K++G D V D +++E E L R L G
Sbjct: 244 AEAFNIPPGERVTGKTVTALKKMGFDGVFDTDFTADLTILEEGTELLTRLKKALVNGEKV 303
Query: 183 --PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
PL TS PGW+ Y E + + +LP +S KSPQQ+ G+L KT+ A+K+G++P I V
Sbjct: 304 PVPLLTSCSPGWINYIEHYYPD-LLPNLSTCKSPQQMFGALAKTYYAQKMGINPESIVTV 362
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
++MPC KK EA R + + GY+DVD V+T EL ++ + L E K+G D P
Sbjct: 363 SVMPCTAKKFEADRPEMCDS--GYKDVDYVLTNRELARMIKQ--SGLNLMELKEGEYDSP 418
Query: 301 WDEHNPHRMLLVNGTGSGGYAHNVLSHAIR---QLCPG-ESPV--VEFKPLRNPD-IREA 353
++ G V+ AIR +L G E P +E P+R + ++EA
Sbjct: 419 MGISTGAAVIF-------GVTGGVMEAAIRTAYELVTGREVPFNNLEIHPVRGMEGVKEA 471
Query: 354 TFTCGD----------VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGG 403
+ + V ++ +ANG N + ++ K++ + Y FIEIMACP GCL GG
Sbjct: 472 SLVIENALPEWSFLEGVEVQVAVANGLANAKKVMDKVRSGEVAYHFIEIMACPGGCLGGG 531
Query: 404 AQIRNEKVASPKETALELETILCD----LAKSEPRENATLEHLYKAWLGGKSTDKGKHML 459
Q + + KE + + D L + +N ++ LY+ +LG +K +L
Sbjct: 532 GQ----PIPTSKEIREKRAKAIYDEDRNLCLRKSHDNPAVKKLYEEFLGAPLGEKSHKLL 587
Query: 460 NTSY 463
+T Y
Sbjct: 588 HTHY 591
>gi|392963546|ref|ZP_10328972.1| hydrogenase, Fe-only [Pelosinus fermentans DSM 17108]
gi|392451370|gb|EIW28364.1| hydrogenase, Fe-only [Pelosinus fermentans DSM 17108]
Length = 513
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 207/448 (46%), Gaps = 63/448 (14%)
Query: 52 IQETNGREEKLKKVEISLTDCLACS-GCITSAESVLITQQSHEEVMKVIRENNAHKASSN 110
+Q G E K +I+ +C C+ C TS+ + ++ + V++V+ + N H
Sbjct: 93 VQTVYGYYELPIKKDITCVNCGQCALWCPTSS---IREREDLQSVLRVLEDPNLH----- 144
Query: 111 ENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVEL 169
IV+ A +SLG +F L +V + K LG D V D + +++E
Sbjct: 145 -----IVIQTAPATRVSLGEEFGLPTGSIVEGQQVAALKLLGFDAVFDTNFSADVTIMEE 199
Query: 170 ENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAE 228
E L R G P FTS CPGWV + E + + +LP++S VKSPQQ++G L KT+ +E
Sbjct: 200 ATELLKRLDKGNALPQFTSCCPGWVKFCEYYYPD-LLPHLSSVKSPQQILGVLAKTYYSE 258
Query: 229 KLGVHPSHIYHVTLMPCYDKKLEASRADF--YNEELG---YRDVDCVITAVELEVLLANE 283
++G+ P +I V +MPC KK E R + + G RDVD ++T EL L+
Sbjct: 259 RVGIAPENIVSVAVMPCTAKKFECQRPEMNAAGRKAGNPQIRDVDFILTTRELARLM--- 315
Query: 284 LATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQLC------- 333
K +D E + L+ +G+G G V+ A+R L
Sbjct: 316 ---------KLRKIDLSGLESAAYDHLMGESSGAGVIFGATGGVMEAAVRSLYFLVSKQR 366
Query: 334 PGESPVVEFKPLRN-PDIREA-TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIE 391
P E +++F +R ++EA G +L+ + +G +N + +++K++ P+ FIE
Sbjct: 367 PPEQ-LLKFDAVRGLGGVKEAEVMIPGKGSLKVAVCHGLKNARMILEKVRGDNSPWSFIE 425
Query: 392 IMAC----------PSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEH 441
M C P L ++R ++A L+ + K EN ++
Sbjct: 426 FMGCVGGCIGGGGQPRTSLASADEVRQARIAG----LYSLDDRI--YRKRASFENQKVQT 479
Query: 442 LYKAWLGGKSTDKGKHMLNTSYHNIPKN 469
LYK +LG +D + +L+T Y + K+
Sbjct: 480 LYKEYLGNPGSDLAETLLHTHYVDRAKD 507
>gi|449017315|dbj|BAM80717.1| similar to nuclear prelamin A recognition factor [Cyanidioschyzon
merolae strain 10D]
Length = 525
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 189/440 (42%), Gaps = 92/440 (20%)
Query: 4 SRFSGVLQLTDLDDFIGPSQECIKPIPIEKPSGPRTGAKIRIQDDGAYIQETNGREEKLK 63
SRFS L++TDLDDF+ S C+ P+ P A + + + NG E
Sbjct: 8 SRFSTGLRVTDLDDFLPSSTACVLPLQGGLPPPGSVAAPVYSHN----AHDANG-ETNTP 62
Query: 64 KVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQ 123
++L+DCL+CSGCITSAE+VL+ S +N A S + +A
Sbjct: 63 VARVTLSDCLSCSGCITSAETVLLATHS---------VDNFVTACSQSADAFGAVVVAPA 113
Query: 124 PVLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL---- 178
V SL + + L+ E V+ ++ F + G V+ + C S++E + ++R
Sbjct: 114 VVASLASVWKLAEIESVLERIQTIFDKFGAFAVVLNSVGRCLSVLETCAQAVERLQPDQN 173
Query: 179 SGGG---PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
G G PLF S CPGW Y EK+ + ++ KSPQ +M L++ L E
Sbjct: 174 DGSGAQQPLFASACPGWTFYVEKTQPHLV-SCLATAKSPQAMMQLLVRHELGE------- 225
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
H + V++ PCYDKKLE+ R +D + V EVL E A
Sbjct: 226 HAWTVSIAPCYDKKLESQR--------DAKDSEHVFVLTATEVLELAERAP--------- 268
Query: 296 ILDWPWDEHNPHRMLLVN-----------------GTGSGGYAHNVLSHAIRQLCPGESP 338
P ++ R L ++ G SGGYA V + + +
Sbjct: 269 ----PHMPNDARRQLRISQQVSALTKFRGAWWATFGGLSGGYAVEVFRYVAQYVFKHRVS 324
Query: 339 VVEFKPL----RNPDIRE-----------------ATFTCGDVTLRFCIAN--GFRNIQN 375
+P RNPD+R+ D+ LR+ +A GFRNIQN
Sbjct: 325 DAVLEPAAVRERNPDLRQLLLYQHRSSGDFVVNFRPVIADDDLQLRYSVATAYGFRNIQN 384
Query: 376 LIQKLKRK-RLPYDFIEIMA 394
++++ K R ++F+E+MA
Sbjct: 385 IVRQYKHTGRCNWNFVEVMA 404
>gi|119610199|gb|EAW89793.1| hCG30379, isoform CRA_c [Homo sapiens]
Length = 230
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 105/185 (56%), Gaps = 6/185 (3%)
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGI 160
+ N K ++++ K +V+S+ Q + AKF LS +LCGF K LGV V D I
Sbjct: 32 QENGEKCDTSKH-KVLVVSVCPQSLPYFAAKFNLSVTDASRRLCGFLKSLGVHYVFDTTI 90
Query: 161 AHCFSLVELENEFLDRFLSGGG-----PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQ 215
A FS++E + EF+ R+ P+ TS CPGWV YAE+ G I ++ KSPQ
Sbjct: 91 AADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAERVLGRPITAHLCTAKSPQ 150
Query: 216 QVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVE 275
QVMGSL+K + A + + P I+HV + PCYDKKLEA + G R DCV+T+ E
Sbjct: 151 QVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESLPPALHGSRGADCVLTSGE 210
Query: 276 LEVLL 280
+ ++
Sbjct: 211 IAQIM 215
>gi|312144095|ref|YP_003995541.1| hydrogenase, Fe-only [Halanaerobium hydrogeniformans]
gi|311904746|gb|ADQ15187.1| hydrogenase, Fe-only [Halanaerobium hydrogeniformans]
Length = 570
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 191/418 (45%), Gaps = 51/418 (12%)
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIV---- 117
K + + +C C CI S T HE V ++ +A NEN IV
Sbjct: 183 FKDMGMGNVECTNCGQCILSCP----TGALHE----VYQKEKVWQALENENKHVIVQTAP 234
Query: 118 -LSLAIQPVLSLGAKFALSHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDR 176
+ +AI S A +S Q+VA L KRLG D V D A +++E E ++R
Sbjct: 235 AVRVAISEPFSAKAG-EISTGQLVAAL----KRLGFDAVFDTNFAADLTIMEEGTELINR 289
Query: 177 FLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPS 235
+ PLFTS PGW+ + E + ++ L +S KSPQQ+ G++ K + AEK G+ P
Sbjct: 290 INNKETLPLFTSCSPGWIKFIEHFYPQY-LSNLSSAKSPQQMFGAVAKNYYAEKAGIDPD 348
Query: 236 HIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDG 295
+ V++MPC KK EA R +E+G DVD V+T EL L+ K
Sbjct: 349 DLVVVSVMPCTAKKFEAKR-----KEMG-SDVDYVLTTRELSGLI------------KAA 390
Query: 296 ILDWPWDEHNPHRMLLVNGTG-------SGGYAHNVLSHAIRQLCPGESPVVEFKPLR-N 347
+D+ E + LL +G +GG L A + E ++F+ LR +
Sbjct: 391 GIDFLNIEEKEYDKLLGVSSGAADIFGSTGGVMEAALRTAYELITEKELEKIDFEVLRGD 450
Query: 348 PDIREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-- 405
I++A+ L+ + +G N +++ + + F+E MACP GCLNGG Q
Sbjct: 451 QGIKKASVNIEGFELKVAVVHGLNNAHKIMKMIDEGE-EFHFVEFMACPGGCLNGGGQPI 509
Query: 406 IRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+E V + A+ L KS EN ++ LY+ +L ++ +L+T Y
Sbjct: 510 SYDEDVVEKRRKAIYQIDKNKKLRKS--HENPYIKKLYEEYLDKPGSELAHRLLHTEY 565
>gi|160942337|ref|ZP_02089645.1| hypothetical protein CLOBOL_07222 [Clostridium bolteae ATCC
BAA-613]
gi|158434701|gb|EDP12468.1| hypothetical protein CLOBOL_07222 [Clostridium bolteae ATCC
BAA-613]
Length = 451
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 192/418 (45%), Gaps = 50/418 (11%)
Query: 72 CLACSGCITSAESVLITQQSH--EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
C+ C C + I +S E M V N+ K ++ S A + LG
Sbjct: 55 CIHCGQCAAACPERAIRAKSQWREAAMAV-----------NDQQKIVIFSTAPSVRVGLG 103
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGGPL--FT 186
F V + + ++LG D VLDV + +++E EFL RF++ PL FT
Sbjct: 104 ECFGGKPGDFVESYMVSALRKLGADFVLDVAFSADLTIMEEGTEFLKRFIADSHPLPQFT 163
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S CP WV Y E H E I P +S KSP + G+LIKT+ +++ G+ P I ++ + PC
Sbjct: 164 SCCPAWVKYIETFHPERI-PCLSSTKSPISMQGALIKTYFSKEKGIDPRRIVNIAVAPCT 222
Query: 247 DKKLEASR-----ADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E SR A Y G RD D V+T EL ++E G D
Sbjct: 223 AKKFEISREELCSAGAYLGIPGLRDNDYVLTTREL---------AEWIREAGIGFYDLTP 273
Query: 302 DEHNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGESP---VVEFKPLRNPD-IR 351
+ L+ G+G+G G V+ A+R + G P +++++P+R + ++
Sbjct: 274 SAFDS---LMGEGSGAGVIFGNTGGVMEAALRMAYSVVNGIEPPDLLMQYQPVRGLEQVK 330
Query: 352 EATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKV 411
E+ + G +R + G R + LI YDF+E+M CP GC+ GG Q N +
Sbjct: 331 ESVVSLGGRDVRTAVVYGTRAAEQLIATGAVDD--YDFVEVMTCPGGCIGGGGQPDNGIL 388
Query: 412 ASPKETALE--LETILCDLAKS--EPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
P + + L D +S EN ++HLY+ ++G + + +L+TSYH+
Sbjct: 389 PVPDQLRMARIRSLYLADQERSFRNSLENQEIKHLYETFIGEPMSKMAQLLLHTSYHS 446
>gi|167746889|ref|ZP_02419016.1| hypothetical protein ANACAC_01601 [Anaerostipes caccae DSM 14662]
gi|167653849|gb|EDR97978.1| hydrogenase, Fe-only [Anaerostipes caccae DSM 14662]
Length = 515
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 162/349 (46%), Gaps = 32/349 (9%)
Query: 66 EISLTDCLACSGCITSAESVLIT-QQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQP 124
+++ TDC+ C C + IT +Q E V + + +V+ +A
Sbjct: 136 DLAQTDCVGCGQCRAVCPTGAITIKQDIERVWDALSDPKIR----------VVVQIAPAV 185
Query: 125 VLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG- 182
+++G KF + E V+ +L +R+G D V D +++E E ++R SG
Sbjct: 186 RVAVGDKFGIPKGENVLGRLVAALRRIGFDEVYDTNFGADLTVMEESKELVERLESGDNL 245
Query: 183 PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTL 242
PLFTS CP WV + E + +F IS +SPQ++ G+LIK V++
Sbjct: 246 PLFTSCCPAWVKFCENRYPQF-RKKISTCRSPQEMFGALIKEEARMDEAGDSRKTVVVSI 304
Query: 243 MPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
MPC KK E +R + +NE G ++VD V+T E ++ + L + + LD P+
Sbjct: 305 MPCTAKKAEITRPEHFNE--GEQNVDYVLTTTEASRMIQE--SGIDLSQVEPEALDMPFG 360
Query: 303 EHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFT 356
+ +G G +GG VL + + + F +R D I+EA+
Sbjct: 361 --------ISSGAGAIFGVTGGVTEAVLRRLMNSDRAEDLEAISFTGVRGVDGIKEASVK 412
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
GD ++ + NG + ++ KL + YDF+E+MAC GC+ GG Q
Sbjct: 413 LGDRDVKIAVVNGLKCASEVLDKLDAGEIYYDFVEVMACKRGCITGGGQ 461
>gi|303230254|ref|ZP_07317021.1| putative ferredoxin hydrogenase [Veillonella atypica
ACS-134-V-Col7a]
gi|302515037|gb|EFL57012.1| putative ferredoxin hydrogenase [Veillonella atypica
ACS-134-V-Col7a]
Length = 489
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 188/411 (45%), Gaps = 34/411 (8%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + I ++S +EV I + N K +V A + LG
Sbjct: 58 CIHCGQCASICPFDSINERSEIDEVKAAIADPN----------KIVVFQTAPAVRVGLGE 107
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTS 187
+F L V K+ ++LG D +LD +++E +E L+R ++ P FTS
Sbjct: 108 EFGLDAGTFVEGKMVAALRKLGGDYILDTNFGADMTIMEEASELLERVINTDSVLPQFTS 167
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + EF LP +S KSP + KT+ AEK+G+ I V + PC
Sbjct: 168 CCPAWVKFAETFYPEF-LPNLSTAKSPIAMQAPTQKTYFAEKMGLDAKQIVAVAVTPCTA 226
Query: 248 KKLEASRADFYNEELGY------RDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R D N Y RD D IT EL L E E +D D
Sbjct: 227 KKFEIRR-DEMNSSAEYWDVPEMRDTDYCITTRELAKWLRAE--EINFDELEDSAFDPLM 283
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRNPD-IREATFTCG 358
E + ++ N +GG + A + ++P ++ F+ +R D REA G
Sbjct: 284 GEASGGGIIFGN---TGGVMEAAMRAAYKLATGEDAPQTLIPFEAIRGMDGAREADVVIG 340
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
D TL +G N++ I++++ + + YDFIE+MAC GC+ GG Q R + + K
Sbjct: 341 DKTLHVAAVHGTGNLRKFIERMRAENIHYDFIEVMACRGGCIGGGGQPRVKLPMADKARE 400
Query: 419 LELETILCDLAKSEPR---ENATLEHLYKAWLGGKS-TDKGKHMLNTSYHN 465
+ ++ A+ + + +N ++ LY + GK + K HML+T++ N
Sbjct: 401 ARIASLYTRDAEVQVKAACDNPDIQKLYAEFFDGKPMSHKAHHMLHTTFVN 451
>gi|334339108|ref|YP_004544088.1| hydrogenase Fe-only [Desulfotomaculum ruminis DSM 2154]
gi|334090462|gb|AEG58802.1| hydrogenase, Fe-only [Desulfotomaculum ruminis DSM 2154]
Length = 634
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 197/409 (48%), Gaps = 32/409 (7%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPV 125
+S C+AC C+ + + +T++S+ EEV + + + + H +V+ A
Sbjct: 213 LSEVACIACGQCVLACPTASLTERSYIEEVWQALGDPDKH----------VVVQTAPAIQ 262
Query: 126 LSLGAKFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+S+G +F L VV+ K+ +RLG D V A +++E E L R GG P
Sbjct: 263 VSIGEEFDLPVGTVVSEKMAAALRRLGFDSVFSTDFAADMTIMEEAGELLQRMEKGGPLP 322
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
L +S PGW+ E + EFI ++S KSP ++ G+L KT+ A+K G+ P + V +M
Sbjct: 323 LISSCSPGWIKLCEHFYPEFI-HHLSSCKSPMEMFGALAKTYYAQKKGIGPKDMVVVGVM 381
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
PC KK EA+R + + G++DVD V+T EL ++ A L++ + D P
Sbjct: 382 PCTAKKFEAARPEM--KTYGFQDVDYVLTTRELARMIKE--ADLDLRKMPEESFDQPLGL 437
Query: 304 HNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRN-PDIREATFTCGDVTL 362
+ + +GG + A+ E +EFK LR ++EA +
Sbjct: 438 SSGAANIFA---ATGGVMEAAIRTALALTGGKEMGRLEFKELRGIRGVKEAELELKGQKI 494
Query: 363 RFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETALELE 422
R +A+G N + L+++LKR + FIEIMAC GC+ GG Q P E LE
Sbjct: 495 RLAVAHGTSNARKLMERLKRGE-QFHFIEIMACAGGCVGGGGQPVTRDPEKP-ELTLEHR 552
Query: 423 T------ILCDLAKSEPR--ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ DL K R EN + +Y+ +LG + K K +L+T Y
Sbjct: 553 SQRAKGLYALDLGKELRRSHENKAVLQVYEEFLGEPMSKKAKEILHTRY 601
>gi|225026581|ref|ZP_03715773.1| hypothetical protein EUBHAL_00831 [Eubacterium hallii DSM 3353]
gi|224956073|gb|EEG37282.1| hydrogenase, Fe-only [Eubacterium hallii DSM 3353]
Length = 566
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 166/351 (47%), Gaps = 37/351 (10%)
Query: 66 EISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAH---KASSNENTKTIVLSLAI 122
+++ T C+ C C + IT + +N H +A +++NT+ IV +A
Sbjct: 182 KMAETACVGCGQCRVVCPTGAITIK-----------HNIHPVWEALADKNTRVIV-QIAP 229
Query: 123 QPVLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG 181
+++G KF + E + KL +R+G D + D +++E EFL+R SG
Sbjct: 230 AVRVAVGDKFGIPKGENSLGKLVAALRRMGFDEIYDTDFGADLTIMEESKEFLERVESGE 289
Query: 182 G-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHV 240
PLFTS CP WV + E+ + E + IS +SPQQ+ G+++K A V
Sbjct: 290 KLPLFTSCCPAWVKFCEQKYPE-LRANISTCRSPQQMFGAVLKEE-ARNNKKDTRKTVVV 347
Query: 241 TLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWP 300
++MPC KK E R + E G +DVD V+T E+ ++E + P
Sbjct: 348 SIMPCTAKKAEILRPEHKTE--GEQDVDFVLTTTEV---------IRMIKEAGIDLAQMP 396
Query: 301 WDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREAT 354
W+ + L +G G SGG VL + ++F +R D I+EA
Sbjct: 397 WEAMD-MPFGLSSGAGVIFGVSGGVTEAVLRRLVEDSGMEALNEIKFTGIRGTDGIKEAV 455
Query: 355 FTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
GD ++ + +G +N LIQK+K + YDF+E+MAC GC+ GG Q
Sbjct: 456 IPYGDRQIKIAVVSGLKNADELIQKIKSGEVQYDFVEVMACRRGCMAGGGQ 506
>gi|406980696|gb|EKE02265.1| hypothetical protein ACD_20C00406G0010 [uncultured bacterium]
Length = 582
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 188/412 (45%), Gaps = 42/412 (10%)
Query: 70 TDCLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSL 128
T C+ C CI + + ++S +V + I + H +++ A +++
Sbjct: 197 TVCVNCGQCIMVCPTGALKERSSIRQVFEAIYDTKKH----------VIVQTAPAIRVTI 246
Query: 129 GAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFT 186
G + + K+ +R+G D V D A +++E +E ++R GG P+ T
Sbjct: 247 GEAMGMDSGVISTGKMVTSLRRIGFDKVFDTNFAADLTIMEEGSELVERITKGGVLPMMT 306
Query: 187 SECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCY 246
S PGW+ + E + I P +S KSP Q++G+L K++ A+K G+ P I+ V++MPC
Sbjct: 307 SCSPGWIKFIEHFYPSLI-PNLSTCKSPHQMLGALAKSYYAQKQGIDPKDIFVVSIMPCT 365
Query: 247 DKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEK-DGILDWPWDEH 304
KK E R++ +E+ RDVD V+T EL +VL + + +L+E K D +L
Sbjct: 366 AKKYECQRSEMEVDEI--RDVDAVLTTRELVKVLKSLGIDFASLEESKFDSLLG------ 417
Query: 305 NPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCG 358
+ G G SGG L A + E ++F +R + +EA
Sbjct: 418 ------IATGAGDIFGASGGVMEAALRSAYYLITGKELSYIDFYSVRGLEGAKEAVIPID 471
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
+ L+ + N + L+ ++ + Y FIE+M CP GC+ GG Q N P+
Sbjct: 472 GMNLKVAVVNSLSQARKLMDRILKGEADYHFIEVMTCPGGCIAGGGQPIN---TDPERIK 528
Query: 419 LELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIP 467
L++I A R N ++ +Y+ +L ++ L+T Y P
Sbjct: 529 ARLKSIYKIDANKGLRASYHNPDVQRVYEEFLKKPLSEVSHKHLHTHYVERP 580
>gi|261367572|ref|ZP_05980455.1| periplasmic [Fe] hydrogenase, large subunit [Subdoligranulum
variabile DSM 15176]
gi|282570359|gb|EFB75894.1| hydrogenase, Fe-only [Subdoligranulum variabile DSM 15176]
Length = 585
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 196/422 (46%), Gaps = 55/422 (13%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSN---ENTKTIVLSLAIQ 123
I +DC+ C CIT + +RE N + + + + K V+ +A
Sbjct: 186 IKESDCVLCGQCITHCPT------------GALRERNDTQRAFDAIADPEKITVVQIAPA 233
Query: 124 PVLSLGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG 182
+ G L+ EQ V ++ +RLG D V D + +++E EFL R+ +G
Sbjct: 234 VRTAWGETLGLTPEQATVHRMAACLRRLGFDYVFDTSFSADLTIMEEGTEFLHRYQAGET 293
Query: 183 ---PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
P+FTS CPGWV Y KSH +S KSPQQ+ G++ K + A+KLGV P IY
Sbjct: 294 RDLPMFTSCCPGWVRYL-KSHYPQWTDRLSTAKSPQQMFGAVTKNYFAQKLGVSPDKIYC 352
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVEL-EVLLANELATTTLQEEKDGILD 298
V++MPC KK E + E +DVD V+T EL ++ A L L EE D
Sbjct: 353 VSIMPCIAKKQECDLPTMHTE--AGKDVDLVLTTRELVRMIRAERLHPEALPEEA---FD 407
Query: 299 WPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPDI- 350
P L TG+G G V+ A+R L G++P E F +R
Sbjct: 408 SP----------LGTYTGAGVIFGVTGGVMEAALRSAYYLVNGKNPKAEAFTAVRGHAFA 457
Query: 351 ---REATFTCGD-VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQI 406
EA F GD +R + NG N +L++ + ++ YDF+E+MACP GC GG Q
Sbjct: 458 QGWTEAEFDLGDGAIVRTAVVNGLGNTHHLLEAIAAGKVHYDFVEVMACPGGCAGGGGQP 517
Query: 407 RN----EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTS 462
+N E+ A + L+ C + EN ++ LY+ L +++ + L+T
Sbjct: 518 QNLDDEERAAERGKRLYALDQ--CSTLRFS-HENPEIQTLYREALDAPGSERAEEWLHTD 574
Query: 463 YH 464
+H
Sbjct: 575 HH 576
>gi|147678345|ref|YP_001212560.1| hydrogenase subunit [Pelotomaculum thermopropionicum SI]
gi|146274442|dbj|BAF60191.1| hypothetical hydrogenase subunit [Pelotomaculum thermopropionicum
SI]
Length = 574
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 192/426 (45%), Gaps = 63/426 (14%)
Query: 60 EKLKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLS 119
EKL +E C+ C C + I Q +++ KV A+ + K +V+
Sbjct: 182 EKLANME-----CVQCGQCSLVCPTAAI--QEKDDIDKVW-------AALADPKKHVVVQ 227
Query: 120 LAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFL 178
A + LG + +V K+ +RLG + V D +++E NE L R
Sbjct: 228 TAPATRVQLGETMGMEPGSIVTGKMVAGLRRLGFNKVFDTDFTADLTILEEGNELLQRIK 287
Query: 179 SGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHI 237
+GG P+ TS PGW+ +AE + + +LP++S KSPQQ+ G+L KT+ A+K G+ P+ I
Sbjct: 288 TGGVLPMITSCSPGWIKFAEHFYPD-LLPHLSTCKSPQQMFGALAKTYYAQKEGIDPADI 346
Query: 238 YHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGIL 297
+ V++MPC KK E R + + GY+DVD V+T+ EL + ++ I
Sbjct: 347 FVVSIMPCTAKKFECQRPEMKDS--GYQDVDVVLTSRELGRM---------FKQANINIA 395
Query: 298 DWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNPD----- 349
+ P +E++ L TG+G G V+ A+R + VV K L N +
Sbjct: 396 ELPEEEYDAP---LGISTGAGEIFGATGGVMEAALRTV----YEVVTGKELDNINFVECR 448
Query: 350 ----IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
++EAT GD+ ++ I NG N + ++ K++ Y FIEIM
Sbjct: 449 GLTGVKEATIQVGDLPVKIAITNGLGNARKVLDKVRAGEADYHFIEIMC--------CPG 500
Query: 406 IRNEKVASPKETALELETILCDLAKSE--------PRENATLEHLYKAWLGGKSTDKGKH 457
SP T E+ D +E EN ++ LY+ +L K
Sbjct: 501 GCIGGGGSPIPTNTEIRLKRIDATYTEDERMVLRKSHENPAVKALYEEFLEKPLGHKSHE 560
Query: 458 MLNTSY 463
+L+T Y
Sbjct: 561 LLHTHY 566
>gi|421067990|ref|ZP_15529384.1| hydrogenase, Fe-only, partial [Pelosinus fermentans A12]
gi|392445132|gb|EIW22465.1| hydrogenase, Fe-only, partial [Pelosinus fermentans A12]
Length = 505
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 163/350 (46%), Gaps = 46/350 (13%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAH--KASSNENTKTIVLSLAIQPVLS 127
T C+ C C + I V+R + A K S++NTK IV +A +
Sbjct: 188 TKCVGCGQCSVVCPTGAI----------VVRNDTAKLWKELSDKNTKVIV-QIAPAVRVG 236
Query: 128 LGAKFALSHEQ-VVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLF 185
+G + S Q V+ ++ +R+G D V D F+++E EF R L+G PLF
Sbjct: 237 IGKELGFSEGQNVMGRIVAALRRIGFDEVFDTSTGADFTVLEEAEEFSKRLLTGDNLPLF 296
Query: 186 TSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPC 245
TS CP WV YAE ++ + I IS +SP Q++ S++K H + V +MPC
Sbjct: 297 TSCCPAWVRYAELNYPQLI-KNISTCRSPMQMLASILKEHHRN----DEKRVVVVAVMPC 351
Query: 246 YDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHN 305
KK EA+R +F + + Y VD VIT EL L+ A E + +D P+
Sbjct: 352 TAKKQEAARDEFKEDGVPY--VDYVITTQELIHLIKE--ANLIFSEIEPEAVDMPF---- 403
Query: 306 PHRMLLVNGTGSG-----GYAHNVLSHAIRQLCPGESP----VVEFKPLRN-PDIREATF 355
GT SG G V IR+L +S + F +R ++EA
Sbjct: 404 --------GTTSGSGVIFGVTGGVTEAVIRRLSDDKSSFALRAIAFTGVRGMQGVKEARI 455
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ 405
C ++ I +G +N +LI+ +++ YDF+E+M+CP GC+ G Q
Sbjct: 456 DCNGREVKIAIVSGLKNADDLIRSIQQGEKQYDFVEVMSCPGGCIGGAGQ 505
>gi|333979699|ref|YP_004517644.1| hydrogenase, Fe-only [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823180|gb|AEG15843.1| hydrogenase, Fe-only [Desulfotomaculum kuznetsovii DSM 6115]
Length = 574
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 197/411 (47%), Gaps = 48/411 (11%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
+C+ C C V T HE E + A+ + K +V+ A +S+G
Sbjct: 189 VNCVNCGQC----SLVCPTAAIHER-----DETDKVWAALADPEKHVVVQTAPAVRVSIG 239
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F L +V KL +RLG D V D +++E +E + R +GG PL TS
Sbjct: 240 EMFGLEPGSIVTGKLVAALRRLGFDKVFDTDFTADLTIMEEGSELIHRLQNGGRLPLITS 299
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
PGW+ + E + +LP +S KSPQQ+ G+L KT+ A+K G+ P+ I+ V++MPC
Sbjct: 300 CSPGWIKFIEHFYPN-LLPNLSTCKSPQQMFGALAKTYYAQKEGIDPARIFVVSIMPCTA 358
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA R + + GYRDVD V+T EL +L K +D+ +
Sbjct: 359 KKYEAGRPEMNSS--GYRDVDVVLTTRELGRML------------KQAGIDFDSLPEEDY 404
Query: 308 RMLLVNGTGSG---GYAHNVLSHAIR---QLCPGESPV-VEFKPLRNPD-IREATFTCGD 359
L TG+G G V+ A+R +L G + V ++F+ +R + ++EA+
Sbjct: 405 DAPLGISTGAGVIFGATGGVMEAALRTAYELVTGATLVSLDFEEVRGLEGVKEASVNLAG 464
Query: 360 VTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-------IRNEKVA 412
L+ +A+G N + ++ + K Y FIEIM CP GC+ GG Q IR ++A
Sbjct: 465 TELKVAVAHGLGNARKILDAVVNKEREYHFIEIMCCPGGCIGGGGQPVPVDNEIRARRIA 524
Query: 413 SPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ + ++ L KS EN ++ LY+ +LG K +L+T Y
Sbjct: 525 AIYQVDRQM-----PLRKSH--ENPAVQALYREFLGEPLGHKSHELLHTHY 568
>gi|332981955|ref|YP_004463396.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Mahella
australiensis 50-1 BON]
gi|332699633|gb|AEE96574.1| NAD(P)-dependent iron-only hydrogenase catalytic subunit [Mahella
australiensis 50-1 BON]
Length = 573
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 209/417 (50%), Gaps = 50/417 (11%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
+S C+ C C T+ I + ++E KV + + + +K +++ A +
Sbjct: 186 LSDAGCILCGQCSTACPVAAIYE--NDETDKVWQ-------AIFDPSKRVIVQTAPAIRV 236
Query: 127 SLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
S+ +F + V + +L +RLG D V D A +++E +E L+R GG P+
Sbjct: 237 SIAEEFDMPPGTVALGQLAAALRRLGFDDVFDTDFAADLTIMEEGHELLERLQHGGTLPM 296
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
TS PGW+ + E+ + + +L ++S KSPQQ+ G++ KT+ A+K+G+ P I+ V++MP
Sbjct: 297 ITSCSPGWINFIEQYYPD-LLSHLSTCKSPQQMFGAVAKTYYAQKIGLKPEDIFVVSIMP 355
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWDE 303
C KK E+ R + + G RDVD +T EL ++ + L EE P+DE
Sbjct: 356 CTAKKYESGRPEMSDS--GVRDVDVALTTRELARMIRQAGIDFAALPEE-------PFDE 406
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIR---QLCPGES-PVVEFKPLRN-PDIREATF 355
L TG+G G V+ A+R ++ G + PV++F R I+EA+
Sbjct: 407 P------LGISTGAGAIFGATGGVMEAALRTVYEVVTGNALPVLDFTDGRGLKGIKEASM 460
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ-------IRN 408
+ +A+G N + L++ ++ Y FIEIM CP GC+ GG Q IR
Sbjct: 461 DLDGANVNVAVAHGIANAKKLLELIRNGAADYQFIEIMCCPGGCIGGGGQPYRTTNAIRQ 520
Query: 409 EKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+++ E E++ + L KS EN ++ LYK +L ++K H+L+T+Y N
Sbjct: 521 QRI----EAIYEVDKAM-PLRKS--HENPAVQALYKEFLEKPLSEKSHHLLHTTYSN 570
>gi|309777113|ref|ZP_07672077.1| putative [Fe] hydrogenase, large subunit HymC [Erysipelotrichaceae
bacterium 3_1_53]
gi|308915122|gb|EFP60898.1| putative [Fe] hydrogenase, large subunit HymC [Erysipelotrichaceae
bacterium 3_1_53]
Length = 572
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 187/413 (45%), Gaps = 44/413 (10%)
Query: 72 CLACSGCITSAESVLITQ-QSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + IT+ Q +V VI++N +K +V + +SLG
Sbjct: 58 CIHCGQCANVCPTGAITEIQDWMQVQSVIQDN----------SKKVVAITSPSVRVSLGE 107
Query: 131 KFALSHEQVVA-KLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSE 188
+F + V ++ G + LG D V D A +++E +E ++R + P FTS
Sbjct: 108 EFGMQPGSYVEEQMVGSLRALGFDYVFDTTFAADLTIMEEASELIERIQTDKPLPQFTSC 167
Query: 189 CPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDK 248
CP WV + E + E +LP IS KSP + IKT AEK + P+ IY V + PC K
Sbjct: 168 CPAWVKFVETYYPE-LLPNISTSKSPISMFAPTIKTWFAEKESLDPNDIYVVAITPCTAK 226
Query: 249 KLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDE 303
K E R + Y + +D D V+T EL AN + L D E
Sbjct: 227 KFEIVREELSDAANYLDRESAQDCDRVVTTREL----ANWMRARNL--------DLEHIE 274
Query: 304 HNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVEFKPLRN----PDIREA 353
+ + L+ G+G+G G V+ AIR + P E L +R+A
Sbjct: 275 ESDYDALMPRGSGAGIIFGNTGGVMEAAIRSAYYFLTKKQPSDELLKLEAVRGMAGVRKA 334
Query: 354 TFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRN--EKV 411
++ L+ + +G N + + LK + +DF+E+M CP GC++GG Q ++ E +
Sbjct: 335 ELVIQNIPLKVAVIHGTDNARKFLHHLKVSKEHFDFVEVMTCPGGCISGGGQTKHIGEDM 394
Query: 412 ASPKETALE-LETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
++ ++ L +A +N ++ +YK + G +D + +L+TSY
Sbjct: 395 DVVRKARIQTLYDKDSSVALRNSHDNPHIQEVYKEFYGKPLSDLAEALLHTSY 447
>gi|325264029|ref|ZP_08130762.1| [Fe] hydrogenase gamma [Clostridium sp. D5]
gi|324031067|gb|EGB92349.1| [Fe] hydrogenase gamma [Clostridium sp. D5]
Length = 721
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 195/414 (47%), Gaps = 45/414 (10%)
Query: 72 CLACSGCITSAESVLITQ-QSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + IT+ + +V + +++ N K ++ S + + LG
Sbjct: 56 CIHCGQCANVCPADSITEVYEYRKVRQAVKDPN----------KVVIFSTSPSVRVGLGE 105
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTS 187
+F + V + + LG D VLD A +++E +E ++R G P FTS
Sbjct: 106 EFGMPPGSFVEGGMVAALRALGADYVLDTNFAADLTIMEEASELVERIKGRKGVLPQFTS 165
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV + E + E +LP+IS KSP + G IKT+ A++ G++P +I +V + PC
Sbjct: 166 CCPGWVKFVETFYPE-VLPHISSSKSPIGMQGPTIKTYFAKQRGMNPENIVNVAVTPCTA 224
Query: 248 KKLEASRADF-----YNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWD 302
KK E RA+ YN+ RD+D VIT EL + +DGI D
Sbjct: 225 KKFEIRRAEMRDSADYNKIDELRDMDHVITTRELARWM-----------REDGI-DLGGA 272
Query: 303 EHNPHRMLLVNGTGSG---GYAHNVLSHAIRQ---LCPGESPVVEF---KPLRNPD-IRE 352
+ + L+ +G+G G V+ A R L G +P +F +P+R D +RE
Sbjct: 273 GTSEYDELMGKASGAGVIFGNTGGVMEAAARTAYFLVSGSNPPEDFLHLEPVRGMDGVRE 332
Query: 353 ATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVA 412
A + L+ + +G N + +++ K + + YDF+E+MAC GC+ GG Q + E
Sbjct: 333 AAVEISGIPLKLAVIHGTENARKFLEQWKNENVHYDFVEVMACRGGCIGGGGQPKTEVPM 392
Query: 413 SPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
S + + ++ A+ + R EN + LY+ + + + ML+T Y
Sbjct: 393 SDEIRKSRISSLYKRDAQMQLRLSHENPEIHKLYETFYEAPLSGLSEKMLHTGY 446
>gi|269798413|ref|YP_003312313.1| hydrogenase, Fe-only [Veillonella parvula DSM 2008]
gi|269095042|gb|ACZ25033.1| hydrogenase, Fe-only [Veillonella parvula DSM 2008]
Length = 489
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 189/411 (45%), Gaps = 34/411 (8%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + I ++S +EV I + N K ++ A + LG
Sbjct: 58 CIHCGQCASICPFDSINERSEIDEVKAAIADPN----------KIVIFQTAPAVRVGLGE 107
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTS 187
+F L V K+ ++LG D +LD +++E +E L+R ++ P FTS
Sbjct: 108 EFGLEAGTFVEGKMVAALRKLGGDYILDTNFGADMTIMEEASELLERVINSDAVLPQFTS 167
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + EF LP +S KSP + KT+ AEK+G+ I V + PC
Sbjct: 168 CCPAWVKFAETFYPEF-LPNLSTAKSPIAMQAPTQKTYFAEKMGLDAKQIVAVAVTPCTA 226
Query: 248 KKLEASR------ADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R A+++N RD D IT EL L E + +D D
Sbjct: 227 KKFEIRRDEMNSSAEYWNTP-EMRDTDYCITTRELAKWLRAE--EINFDDLEDSAFDPLM 283
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRNPD-IREATFTCG 358
E + ++ N +GG + A + ++P ++ F+ +R D REA G
Sbjct: 284 GEASGGGIIFGN---TGGVMEAAMRAAYKMATGEDAPQTLIPFEAIRGMDGAREADVVIG 340
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
D TL +G N++ I++++ + + YDFIE+MAC GC+ GG Q R + + K
Sbjct: 341 DKTLHVAAVHGTGNLRKFIERMRAENIHYDFIEVMACRGGCIGGGGQPRVKLPMADKARE 400
Query: 419 LELETILCDLAKSEPR---ENATLEHLYKAWLGGKS-TDKGKHMLNTSYHN 465
+ ++ A+ + +N ++ LY + GK + K HML+T++ N
Sbjct: 401 ARIASLYTRDAEVTVKAACDNPDIQKLYAEFFDGKPMSHKAHHMLHTTFVN 451
>gi|160942429|ref|ZP_02089736.1| hypothetical protein CLOBOL_07313 [Clostridium bolteae ATCC
BAA-613]
gi|158434681|gb|EDP12448.1| hypothetical protein CLOBOL_07313 [Clostridium bolteae ATCC
BAA-613]
Length = 568
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 185/396 (46%), Gaps = 38/396 (9%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
I+ TDC+ C C + I+ ++ EV+ +A ++ NTK +V +A +
Sbjct: 183 IAETDCVNCGQCRAVCPTGAISINTNIEVI--------WEALADPNTK-VVAQVAPAVRV 233
Query: 127 SLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PL 184
++G F ++ E V+ K+ R+G D V D +++E EFL+R +SG PL
Sbjct: 234 AVGDFFGMARGENVMGKIVNVLHRMGFDEVFDTAYGADLTVIEESKEFLERLVSGKNLPL 293
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CP WV + E + EF +S +SPQQ+ G++I+ + + V++MP
Sbjct: 294 FTSCCPAWVSFCENRYPEF-KQNLSTCRSPQQMFGAVIQEYYRNPQKSGGKKLLSVSIMP 352
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK E + + ++ G DVD V+T EL ++ K GI D
Sbjct: 353 CTAKKAEILQEE--SKTNGKADVDYVLTTTELVTMI-----------RKSGIRFENIDIE 399
Query: 305 NPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPG----ESPVVEFKPLRNPD-IREATFT 356
+ M G+G+G G V+ +R+LC G E + + +R + ++E T+
Sbjct: 400 SSD-MPFGIGSGAGVIFGNTGGVMEAVLRRLCEGHDRTEMDQIRYSGVRGEEGLKEITYD 458
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ--IRNEKVASP 414
+R I +G N L++++ K YDF+E+MAC GC+ GG Q + +
Sbjct: 459 YNGRKIRAAIVSGLANADMLMKRIGNKEAEYDFVEVMACRRGCIMGGGQPVPAGPRTKAA 518
Query: 415 KETALELETILCDLAKSEPRENATLEHLYKAWLGGK 450
+ L I + KS EN + LY+ L G+
Sbjct: 519 RAKGLYDTDINTQIKKSN--ENPLVLSLYENLLKGR 552
>gi|345858375|ref|ZP_08810769.1| hydrogenase family protein [Desulfosporosinus sp. OT]
gi|344328569|gb|EGW39953.1| hydrogenase family protein [Desulfosporosinus sp. OT]
Length = 580
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 187/400 (46%), Gaps = 24/400 (6%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T C C C+ + +M++ + + KA S+ T+ +V+ A ++LG
Sbjct: 193 TSCTFCGQCVAVCPT--------GALMELDQVDKVWKALSDP-TRFVVVQTAPAVRVALG 243
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F L +V K+ +RLG D V D A +++E +E + R GG P+ TS
Sbjct: 244 EGFGLEPGTIVTGKMVAALRRLGFDRVFDTDFAADVTIMEEASELVHRLKHGGRLPILTS 303
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV + E + +L S KSP Q++G L K++ A+ G+ P I V++MPC
Sbjct: 304 CCPAWVKFFEHQFPD-LLDIPSTCKSPHQMLGVLTKSYYAKTYGIDPQKITVVSIMPCIA 362
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK EA+R + + + DVD VIT EL ++ A KD D P E
Sbjct: 363 KKYEAARPELGQDSV-TPDVDIVITTRELARMIRE--AGIHFTNLKDEEFDHPLGESTGA 419
Query: 308 RMLLVNGTGSGGYAHNVLSHAIRQLCPGESPVVEFKPLRNPD-IREATFTCGDVTLRFCI 366
++ GT +GG L A L VEF+ LR D I+EA R +
Sbjct: 420 AVIF--GT-TGGVLEAALRTAYEVLTGETLEKVEFEALRGMDGIKEAVIPIAGRDFRVAV 476
Query: 367 ANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR---NEKVASPKETALELET 423
+G + + +++K++ YD IEIMACP GC+ GG Q N ++ + A+ E
Sbjct: 477 THGLGHARYILEKIQTGEAHYDAIEIMACPGGCIGGGGQPYHHGNVEILKARANAIYQED 536
Query: 424 ILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
L KS EN + LYK ++G +K +L+TSY
Sbjct: 537 RSKPLRKSH--ENPAVLALYKDFIGEPYGEKAHELLHTSY 574
>gi|416999473|ref|ZP_11939995.1| ferredoxin hydrogenase HydA1 [Veillonella parvula ACS-068-V-Sch12]
gi|333976763|gb|EGL77627.1| ferredoxin hydrogenase HydA1 [Veillonella parvula ACS-068-V-Sch12]
Length = 489
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 189/411 (45%), Gaps = 34/411 (8%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + I ++S +EV I + N K ++ A + LG
Sbjct: 58 CIHCGQCASICPFDSINERSEIDEVKAAIADPN----------KIVIFQTAPAVRVGLGE 107
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTS 187
+F L V K+ ++LG D +LD +++E +E L+R ++ P FTS
Sbjct: 108 EFGLEAGTFVEGKMVAALRKLGGDYILDTNFGADMTIMEEASELLERVINSDAVLPQFTS 167
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + EF LP +S KSP + KT+ AEK+G+ I V + PC
Sbjct: 168 CCPAWVKFAETFYPEF-LPNLSTAKSPIAMQAPTQKTYFAEKMGLDAKQIVAVAVTPCTA 226
Query: 248 KKLEASR------ADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R A+++N RD D IT EL L E + +D D
Sbjct: 227 KKFEIRRDEMNSSAEYWNTP-EMRDTDYCITTRELAKWLRAE--EINFDDLEDSAFDPLM 283
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRNPD-IREATFTCG 358
E + ++ N +GG + A + ++P ++ F+ +R D REA G
Sbjct: 284 GEASGGGIIFGN---TGGVMEAAMRAAYKMATGEDAPQTLIPFEAIRGMDGAREADVVIG 340
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
D TL +G N++ I++++ + + YDFIE+MAC GC+ GG Q R + + K
Sbjct: 341 DKTLHVAAVHGTGNLRKFIERMRAENIHYDFIEVMACRGGCIGGGGQPRVKLPMADKARE 400
Query: 419 LELETILCDLAKSEPR---ENATLEHLYKAWLGGKS-TDKGKHMLNTSYHN 465
+ ++ A+ + +N ++ LY + GK + K HML+T++ N
Sbjct: 401 ARIASLYTRDAEVTVKAACDNPDIQKLYAEFFDGKPMSHKAHHMLHTTFVN 451
>gi|294792281|ref|ZP_06757429.1| ferredoxin hydrogenase [Veillonella sp. 6_1_27]
gi|294457511|gb|EFG25873.1| ferredoxin hydrogenase [Veillonella sp. 6_1_27]
Length = 489
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 187/411 (45%), Gaps = 34/411 (8%)
Query: 72 CLACSGCITSAESVLITQQSH-EEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGA 130
C+ C C + I ++S +EV I + N K ++ A + LG
Sbjct: 58 CIHCGQCASICPFDSINERSEIDEVKAAIADPN----------KIVIFQTAPAVRVGLGE 107
Query: 131 KFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG--PLFTS 187
+F L V K+ ++LG D +LD +++E +E L+R ++ P FTS
Sbjct: 108 EFGLEAGTFVEGKMVAALRKLGGDYILDTNFGADMTIMEEASELLERVINSDAVLPQFTS 167
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CP WV +AE + EF LP +S KSP + KT+ AEK+G+ I V + PC
Sbjct: 168 CCPAWVKFAETFYPEF-LPNLSTAKSPIAMQAPTQKTYFAEKMGLDAKQIVAVAVTPCTA 226
Query: 248 KKLEASRADFYNEELGY------RDVDCVITAVELEVLLANELATTTLQEEKDGILDWPW 301
KK E R D N Y RD D IT EL L E + +D D
Sbjct: 227 KKFEIRR-DEMNSSAEYWDTPEMRDTDYCITTRELAKWLRAE--EINFDDLEDSAFDPLM 283
Query: 302 DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESP--VVEFKPLRNPD-IREATFTCG 358
E + ++ N +GG + A + ++P ++ F+ +R D REA G
Sbjct: 284 GEASGGGIIFGN---TGGVMEAAMRAAYKMATGEDAPQTLIPFEAIRGMDGAREADVVIG 340
Query: 359 DVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKETA 418
D TL +G N++ I++++ + + YDFIE+MAC GC+ GG Q R + + K
Sbjct: 341 DKTLHVAAVHGTGNLRKFIERMRAENIHYDFIEVMACRGGCIGGGGQPRVKLPMADKARE 400
Query: 419 LELETILCDLAKSEPR---ENATLEHLYKAWLGGKS-TDKGKHMLNTSYHN 465
+ ++ A+ + +N ++ LY + GK + K HML+T++ N
Sbjct: 401 ARIASLYTRDAEVTVKAACDNPDIQKLYAEFFDGKPMSHKAHHMLHTTFVN 451
>gi|308069432|ref|YP_003871037.1| Periplasmic [Fe] hydrogenase large subunit (Fe hydrogenlyase)
[Paenibacillus polymyxa E681]
gi|305858711|gb|ADM70499.1| Periplasmic [Fe] hydrogenase large subunit (Fe hydrogenlyase)
[Paenibacillus polymyxa E681]
Length = 501
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 176/355 (49%), Gaps = 31/355 (8%)
Query: 126 LSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-P 183
+SL +F + + K+ +RLG D V D +++E E + R GG P
Sbjct: 140 VSLAEEFGMPFGTLTPGKMAAALRRLGFDRVYDTNFGADVTIMEEGTELIRRVTEGGPLP 199
Query: 184 LFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLM 243
+FTS CP WV +AE + + +L ++S KSP Q++G+LIK++ A+ V P++IY V +M
Sbjct: 200 MFTSCCPAWVRFAEIEYPD-LLDHLSSCKSPMQMLGALIKSYGAQLDEVEPANIYSVAIM 258
Query: 244 PCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LATTTLQEEKDGILDWPWD 302
PC K+ E R + E GYRDVD V+T EL + + L +E+ D P
Sbjct: 259 PCTCKQFECDRPEM--ESDGYRDVDEVLTTRELAYWIKQRGIDFANLPDEE---FDSPLG 313
Query: 303 EHNPHRMLLVNGTGS-GGYAHNVLSHAIR---QLCPGES-PVVEFKPLRNPD-IREATFT 356
++ +G GS G V+ AIR +L E P ++ +R + IR A
Sbjct: 314 QY--------SGAGSIFGVTGGVMEAAIRTGYELLTNEKLPKLQLDFVRGEEGIRVAEVQ 365
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQ----IRNEKVA 412
G + L+ + G ++ L+ +++ Y FIE+M CP+GC++GG Q + +++
Sbjct: 366 VGKLQLKVAVVAGLQHAYQLLDRVQAGECDYHFIEVMGCPAGCISGGGQPKLMLEKQRIE 425
Query: 413 S--PKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
+ +++++ + KS EN + LY +LG H+L+T++
Sbjct: 426 AYRARKSSIYGHDAAHQVRKSH--ENPHIIKLYDEFLGEPLGHVSHHLLHTTFQQ 478
>gi|169831496|ref|YP_001717478.1| hydrogenase, Fe-only [Candidatus Desulforudis audaxviator MP104C]
gi|169638340|gb|ACA59846.1| hydrogenase, Fe-only [Candidatus Desulforudis audaxviator MP104C]
Length = 590
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 171/381 (44%), Gaps = 40/381 (10%)
Query: 101 ENNAHKASSNENTKTIVLSLAIQPVLSLGAKFALS-HEQVVAKLCGFFKRLGVDLVLDVG 159
+ A A+ + K +V+ A ++LG F L V K+ +RLG D V D
Sbjct: 212 DTGAVWAALADPAKHVVVQTAPATRVTLGEAFGLPPGTPVTGKMVAALRRLGFDRVFDTD 271
Query: 160 IAHCFSLVELENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVM 218
++VE NE + R GG P+ TS PGW+ + E + EF LP++S KSPQQ+
Sbjct: 272 FTADLTIVEEGNELIHRLTKGGPLPMITSCSPGWIKFIEHFYPEF-LPHLSTAKSPQQMF 330
Query: 219 GSLIKTHLAEKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEV 278
G+L KT+ AE+ G+ P + V++MPC KK EA R + GYRDVD V+T EL
Sbjct: 331 GALAKTYYAEQAGIDPKDMVVVSIMPCTAKKFEAGRPEMNAS--GYRDVDMVLTTRELVR 388
Query: 279 LLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLC 333
+L A L D D P M L G G +GG L A L
Sbjct: 389 MLHE--ACIDLNNMPDEEYDRP--------MGLSTGAGAIFGATGGVMEAALRTAYELLT 438
Query: 334 PGESPVVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLP-YDFIE 391
P ++ + +R D +R+A +R +A+G + + L++KLK L FIE
Sbjct: 439 GKPLPGIDIEVVRGLDGVRQAAIDLEGNPVRVMVAHGLGHARMLMEKLKAGELKDCHFIE 498
Query: 392 IMA---------CPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHL 442
+MA C N + R + ++L + EN + L
Sbjct: 499 VMACPGGCIGGGGQPICANPDVRQRRAAGIYRLDKGMKLR---------KSHENPAIIEL 549
Query: 443 YKAWLGGKSTDKGKHMLNTSY 463
Y+ +LG +K +L+TSY
Sbjct: 550 YERFLGEPLGEKSHKLLHTSY 570
>gi|365166757|ref|ZP_09360564.1| hydrogenase, Fe-only [Synergistes sp. 3_1_syn1]
gi|363619441|gb|EHL70757.1| hydrogenase, Fe-only [Synergistes sp. 3_1_syn1]
Length = 581
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 195/407 (47%), Gaps = 28/407 (6%)
Query: 72 CLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLGAK 131
C C C + I ++ E KV A+ + K ++ A ++LG
Sbjct: 191 CTYCGQCAAVCPTAAICERDDTE--KVF-------AALADPKKYTIVQTAPATRVALGEA 241
Query: 132 FAL-SHEQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTSEC 189
L + E V K+ +RLG D V D + +++E +EFLDR ++GG P+ TS
Sbjct: 242 LGLPAGEIVTGKMVAALRRLGFDKVFDTDFSADLTIMEEGHEFLDRVVNGGVLPMITSCS 301
Query: 190 PGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYDKK 249
PGW+ + E + + +LP++S KSPQ + G+L KT+ E G+H IY V++MPC KK
Sbjct: 302 PGWINFIEIKYPD-LLPHLSTAKSPQGMFGALAKTYWPETQGIHVEDIYSVSIMPCTAKK 360
Query: 250 LEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPHRM 309
E R + G DVD V+T EL ++ N E+D D P +
Sbjct: 361 AECVRPQLQSNP-GIPDVDTVLTTRELARMIKNAGIDFKNLPEED--YDSPLGSSTGAAV 417
Query: 310 LLVNGTGSGGYAHNVLSHAIRQLCPGES-PVVEFKPLRNPD-IREATFTC----GDVTLR 363
+ +GG L L G+ P + F+P+R + I+EA+ VT++
Sbjct: 418 IF---GVTGGVMEAALRTVYAVLNEGKDIPGIIFQPVRGMEGIKEASVDVPVGGQTVTVK 474
Query: 364 FCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIR--NEKVASPKETALEL 421
+A+ +N + L+ K++ Y FIE+MACP GC+ GG Q + N ++ + + A+
Sbjct: 475 LAVAHTLKNAKILMDKIRAGEADYHFIEVMACPGGCIGGGGQPQPVNAEIRAARTAAVYR 534
Query: 422 ETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSYHNIPK 468
E L +S +N + LY+ WLG +K H+L+T Y P+
Sbjct: 535 EDECKTLRQS--HKNPDIVALYEKWLGKPLGEKSHHLLHTHYSAQPR 579
>gi|310780206|ref|YP_003968538.1| ferredoxin hydrogenase [Ilyobacter polytropus DSM 2926]
gi|309749529|gb|ADO84190.1| Ferredoxin hydrogenase [Ilyobacter polytropus DSM 2926]
Length = 466
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 190/412 (46%), Gaps = 29/412 (7%)
Query: 62 LKKVEISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLA 121
+K+ ++ T C++C CI + + ++S+ ++K N K +V L+
Sbjct: 69 IKEENMAATLCISCGQCIKVCTAGALKEKSNISLLK---------EQLNNPNKHVVAQLS 119
Query: 122 IQPVLSLGAKFALSH-EQVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSG 180
++G F +S K+ K +G V G A ++VE + R
Sbjct: 120 PSFKHTIGDGFGISSGTDTSPKIISALKEIGFSKVFSTGFASDVNIVETSADLKKRLDEN 179
Query: 181 GG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYH 239
G P+FTS C GW+ YAEK EF L +S KSPQQ++GSL K++ E + + +I+
Sbjct: 180 GPFPVFTSTCTGWINYAEKFCPEF-LGLLSPCKSPQQILGSLSKSYYEESIDISRENIFS 238
Query: 240 VTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDW 299
V LMPC KK EA+R D +E G +DVD V+T E+ LL N+ K G D
Sbjct: 239 VALMPCIAKKDEANRFDM-KDEYGNKDVDLVLTVNEVASLL-NKKGIDLNNYSKFGTFDK 296
Query: 300 PW-DEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGESPV-VEFKPLRNPD-IREATFT 356
P + R+ V +GG A +L + + GE P V+ K LR D I+ +
Sbjct: 297 PMKSDTGSSRIKAV----TGGLAEAILRNTAHMI--GEDPFSVDLKKLRGMDGIKLTSVV 350
Query: 357 CGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
G L + NG +N+ ++ +K + +E+MACP GC+ GG +E P
Sbjct: 351 LGGKKLNIAVVNGIKNVPVILDMIKDGITEFHLVEVMACPGGCVGGGGIPLSE---DPDI 407
Query: 417 TALELETILCDLAKSEPR---ENATLEHLYKAWLGGKSTDKGKHMLNTSYHN 465
E I A SE R EN ++ LY +L ++ + + + Y N
Sbjct: 408 IQKRAEKIYSYDASSEIRCSWENPDVKTLYSEYLKEPLGEESQRLFHFHYKN 459
>gi|282850650|ref|ZP_06260029.1| putative ferredoxin hydrogenase [Veillonella parvula ATCC 17745]
gi|282580143|gb|EFB85547.1| putative ferredoxin hydrogenase [Veillonella parvula ATCC 17745]
Length = 489
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 178/376 (47%), Gaps = 23/376 (6%)
Query: 106 KASSNENTKTIVLSLAIQPVLSLGAKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCF 164
KA+ + K ++ A + LG +F L V K+ ++LG D +LD
Sbjct: 83 KAAIADPNKIVIFQTAPAVRVGLGEEFGLEAGTFVEGKMVAALRKLGGDYILDTNFGADM 142
Query: 165 SLVELENEFLDRFLSGGG--PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLI 222
+++E +E L+R ++ P FTS CP WV +AE + EF LP +S KSP +
Sbjct: 143 TIMEEASELLERVINSDAVLPQFTSCCPAWVKFAETFYPEF-LPNLSTAKSPIAMQAPTQ 201
Query: 223 KTHLAEKLGVHPSHIYHVTLMPCYDKKLEASR------ADFYNEELGYRDVDCVITAVEL 276
KT+ AEK+G+ I V + PC KK E R A+++N RD D IT EL
Sbjct: 202 KTYFAEKMGLDAKQIVAVAVTPCTAKKFEIRRDEMNSSAEYWNTP-EMRDTDYCITTREL 260
Query: 277 EVLLANELATTTLQEEKDGILDWPWDEHNPHRMLLVNGTGSGGYAHNVLSHAIRQLCPGE 336
L E + +D D E + ++ N +GG + A + +
Sbjct: 261 AKWLRAE--EINFDDLEDSAFDPLMGEASGGGIIFGN---TGGVMEAAMRAAYKMATGED 315
Query: 337 SP--VVEFKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIM 393
+P ++ F+ +R D REA GD TL +G N++ I++++ + + YDFIE+M
Sbjct: 316 APQTLIPFEAIRGMDGAREADVVIGDKTLHVAAVHGTGNLRKFIERMRAENIHYDFIEVM 375
Query: 394 ACPSGCLNGGAQIRNEKVASPKETALELETILCDLAKSEPR---ENATLEHLYKAWLGGK 450
AC GC+ GG Q R + + K + ++ A+ + +N ++ LY + GK
Sbjct: 376 ACRGGCIGGGGQPRVKLPMADKAREARIASLYTRDAEVTVKAACDNPDIQKLYAEFFDGK 435
Query: 451 S-TDKGKHMLNTSYHN 465
+ K HML+T++ N
Sbjct: 436 PMSHKAHHMLHTTFVN 451
>gi|300123855|emb|CBK25126.2| Iron-hydrogenase [Blastocystis hominis]
Length = 759
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 183/407 (44%), Gaps = 40/407 (9%)
Query: 70 TDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVLSLG 129
T+C++C C + IT+QSH + R A +A K +VL A ++ G
Sbjct: 198 TECISCGQCNVLCPTGAITEQSH-----IPRVKAAMRAG-----KVMVLQTAPATRVAFG 247
Query: 130 AKFALSHEQVV-AKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGGG-PLFTS 187
F +V K+ K LG V D +++E E L+R + G P+FTS
Sbjct: 248 ENFGREPGEVTTGKMVACAKALGFQYVFDTNFGADMTIMEEGTELLERIKNKGPFPMFTS 307
Query: 188 ECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMPCYD 247
CPGWV AEK + E I P +S +SP ++GS +KT+ A+K+ + P IY V+LMPC
Sbjct: 308 CCPGWVNMAEKCYPELI-PNLSSCRSPHMMLGSCVKTYWAKKMNLKPEDIYLVSLMPCTA 366
Query: 248 KKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEHNPH 307
KK E R + E VD V+T EL E T + D + +D
Sbjct: 367 KKDEIERRQMWLNET-TPTVDAVLTTKELGDFCKQENLT-----DWDSFAEMDFDSP--- 417
Query: 308 RMLLVNGTGS-GGYAHNVLSHAIRQLCPGESPVVEFKPLRNPDIREATFTCGDVTLRFCI 366
M + G G G + V+ A+R ++ KPL + EA D T RF +
Sbjct: 418 -MGICTGAGDIFGVSGGVMEAALRTAYELQTG----KPLEKITVDEARGL--DGTKRFSV 470
Query: 367 -ANGF---------RNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPKE 416
NG + + L++ +K + F+E+MACP GC++GG Q + + + +
Sbjct: 471 DMNGTKVNCAVVHSKYARELMENIKAGKEDLQFVEVMACPGGCISGGGQPHSNRADTMDK 530
Query: 417 TALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
+ +I + EN ++ +YK + + +L+T+Y
Sbjct: 531 RMNAIYSIDAGKKLRKSHENPDIQTIYKEFFEKPGSHVAHELLHTTY 577
>gi|405983536|ref|ZP_11041841.1| [FeFe] hydrogenase, group A [Slackia piriformis YIT 12062]
gi|404388351|gb|EJZ83433.1| [FeFe] hydrogenase, group A [Slackia piriformis YIT 12062]
Length = 599
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 192/408 (47%), Gaps = 32/408 (7%)
Query: 67 ISLTDCLACSGCITSAESVLITQQSHEEVMKVIRENNAHKASSNENTKTIVLSLAIQPVL 126
++ DC C CIT + ++S +V +V + ++ T + +A
Sbjct: 195 VAKDDCSYCGQCITHCPVGALHERS--DVSRVFD-------AIDDPEITTIAQIAPSVRT 245
Query: 127 SLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVELENEFLDRFLSGG-GPL 184
S L+ ++ V ++ K LG D V D A +++E +E LDR GG GP+
Sbjct: 246 SWHEGLGLAKDKASVGRMVAAVKSLGFDYVFDTDFAADVTIMEEGSELLDRLGKGGDGPM 305
Query: 185 FTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLGVHPSHIYHVTLMP 244
FTS CPGWV + + + E + +S KSPQQ+ G+L KT+ A+ LGV PS ++ V+ MP
Sbjct: 306 FTSCCPGWVRFLKARYPELV-SKLSTTKSPQQIFGALAKTYYAKLLGVDPSRLFVVSYMP 364
Query: 245 CYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQEEKDGILDWPWDEH 304
C KK E + G+ DVD V+T EL + + L EE+D D P
Sbjct: 365 CVAKKAECAYPGMDAAGTGF-DVDAVLTVRELTRQIKSRFLNVGLLEERD--FDAP---- 417
Query: 305 NPHRMLLVNGTGS-GGYAHNVLSHAIRQ---LCPGESPVVE-FKPLRNPDI----REATF 355
+ + +G G G V+ A+R L G++P + FK +R+ RE TF
Sbjct: 418 ----LGIASGAGHIFGVTGGVMEAALRSAYYLVAGKNPQPDAFKEIRHEGAEFGWREKTF 473
Query: 356 TCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCLNGGAQIRNEKVASPK 415
+LR IA+G N L ++R + YDF+E+MACP GC GG Q +E
Sbjct: 474 DLAGRSLRIAIASGLSNADALCAAIQRGDVHYDFVEVMACPGGCAGGGGQPIHEGRELAA 533
Query: 416 ETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLNTSY 463
E L I A EN ++ Y+ +L ++ + +L++ +
Sbjct: 534 ERGGVLRAIDAKSAIRFSHENPAVQACYETFLEKPLSELAEELLHSDH 581
>gi|347944122|gb|AEP27833.1| FeFe-hydrogenase [Clostridium sartagoforme]
Length = 300
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 145/305 (47%), Gaps = 33/305 (10%)
Query: 114 KTIVLSLAIQPVLSLGAKFALSHE-QVVAKLCGFFKRLGVDLVLDVGIAHCFSLVELENE 172
K +++++A ++G F + + V KL + LG D + D+ +++E E
Sbjct: 15 KHVIVAMAPSVRTAMGELFKMGYGVDVTGKLYTALRHLGFDKIFDINFGADMTIMEEATE 74
Query: 173 FLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLAEKLG 231
+ R +GG P+FTS CP WV E + +F L +S KSPQQ+ G+ KT+ +
Sbjct: 75 LVQRIKAGGPFPMFTSCCPAWVRQVENYYPKF-LENLSSAKSPQQIFGTASKTYYPQVAD 133
Query: 232 VHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANELATTTLQE 291
+ P ++ VT+MPC KK EA R + N+ G R++D VIT EL ++
Sbjct: 134 IDPKRVFTVTIMPCTAKKYEADRPEMEND--GLRNIDAVITTRELAKMI----------- 180
Query: 292 EKDGILDWPWDEHNPHRMLLVNGTGSG---GYAHNVLSHAIRQLCPGESPVVEFKPLRNP 348
KD +D+ + + + TG+G G V+ A+R VE K L N
Sbjct: 181 -KDAKIDFAKLDDSEADPAMGEYTGAGAIFGATGGVMEAALRSA----KDFVEGKDLENI 235
Query: 349 D---------IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGC 399
+ I+EAT G + + NG N+ + + + Y FIE+MACP GC
Sbjct: 236 EYEQVRGLAGIKEATVEIGGESYNIAVINGASNVFSFMNSDNFDKKKYHFIEVMACPGGC 295
Query: 400 LNGGA 404
++GG
Sbjct: 296 VSGGG 300
>gi|383785982|ref|YP_005470551.1| hydrogenase, Fe-only [Fervidobacterium pennivorans DSM 9078]
gi|383108829|gb|AFG34432.1| hydrogenase, Fe-only [Fervidobacterium pennivorans DSM 9078]
Length = 583
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 171/368 (46%), Gaps = 24/368 (6%)
Query: 110 NENTKTIVLSLAIQPVLSLGAKFALSHEQV-VAKLCGFFKRLGVDLVLDVGIAHCFSLVE 168
N+N K + A +++G +F + V K+ +RLG D V D +++E
Sbjct: 219 NKNGKVFIAQTAPSVRVAIGEEFGMEPGTVSTGKMVAALRRLGFDYVFDTNFGADLTIME 278
Query: 169 LENEFLDRFLSGGG-PLFTSECPGWVCYAEKSHGEFILPYISRVKSPQQVMGSLIKTHLA 227
+E L R GG P+FTS CPGWV EK EFI P +S KSP Q+M S + + A
Sbjct: 279 EAHELLHRLTKGGVLPMFTSCCPGWVNMVEKEFPEFI-PNLSTTKSPMQIMSS-TREYFA 336
Query: 228 EKLGVHPSHIYHVTLMPCYDKKLEASRADFYNEELGYRDVDCVITAVELEVLLANE-LAT 286
+KLGV P +I V +MPC KK E R+ G + D VIT E +L + ++
Sbjct: 337 KKLGVAPENIVMVAVMPCTAKKDEIERSQHVVN--GIKVTDYVITTREFAKMLRFKGISF 394
Query: 287 TTLQEEKDGILDWPWDEHNPHRMLLVNGTG-----SGGYAHNVLSHAIRQLCPGESPVVE 341
L EEK D P + G G +GG L A + + P +
Sbjct: 395 VNLPEEKH---DSPLGASS--------GAGAIFGVTGGVMEAALRTAYEKFTGEKLPRLV 443
Query: 342 FKPLRNPD-IREATFTCGDVTLRFCIANGFRNIQNLIQKLKRKRLPYDFIEIMACPSGCL 400
F +R D IREA L+ I NG N + L++++K + YDF+E+MAC GC+
Sbjct: 444 FSEVRGLDGIREAEVDFKTRKLKVAIVNGTANAKRLLKEIKEGKRNYDFVEVMACMGGCI 503
Query: 401 NGGAQIRNEKVASPKETALELETILCDLAKSEPRENATLEHLYKAWLGGKSTDKGKHMLN 460
GG Q ++ K+ A + +I EN + LY+ ++G + H L+
Sbjct: 504 GGGGQPKSLDPDIIKKRARAIYSIDEMSVIRRSHENPEIIQLYEEFVGEPNGHVAHHYLH 563
Query: 461 TSYHNIPK 468
T Y + K
Sbjct: 564 TYYTDRSK 571
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,505,133,790
Number of Sequences: 23463169
Number of extensions: 318458725
Number of successful extensions: 716324
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2609
Number of HSP's successfully gapped in prelim test: 537
Number of HSP's that attempted gapping in prelim test: 705821
Number of HSP's gapped (non-prelim): 3724
length of query: 477
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 331
effective length of database: 8,933,572,693
effective search space: 2957012561383
effective search space used: 2957012561383
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)