Your job contains 1 sequence.
>psy3877
MMAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFP
IIHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVA
RLGGNPLLEAILDELLTWDTPDSPK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3877
(145 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0019662 - symbol:qm "quemao" species:7227 "Drosoph... 520 5.8e-50 1
UNIPROTKB|F1NHT9 - symbol:GGPS1 "Uncharacterized protein"... 430 2.0e-40 1
UNIPROTKB|E2R3P8 - symbol:GGPS1 "Uncharacterized protein"... 427 4.2e-40 1
UNIPROTKB|F1RGX0 - symbol:GGPS1 "Uncharacterized protein"... 427 4.2e-40 1
UNIPROTKB|P56966 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 426 5.3e-40 1
UNIPROTKB|A8MVQ8 - symbol:GGPS1 "Geranylgeranyl diphospha... 426 5.3e-40 1
UNIPROTKB|O95749 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 426 5.3e-40 1
RGD|1359680 - symbol:Ggps1 "geranylgeranyl diphosphate sy... 424 8.7e-40 1
MGI|MGI:1341724 - symbol:Ggps1 "geranylgeranyl diphosphat... 420 2.3e-39 1
ZFIN|ZDB-GENE-030131-8742 - symbol:ggps1 "geranylgeranyl ... 420 2.3e-39 1
UNIPROTKB|Q9P885 - symbol:carG "Geranylgeranyl pyrophosph... 386 9.2e-36 1
ASPGD|ASPL0000062493 - symbol:AN0654 species:162425 "Emer... 326 2.1e-29 1
DICTYBASE|DDB_G0293588 - symbol:ggps1 "geranylgeranyl dip... 318 1.5e-28 1
UNIPROTKB|G4NEM8 - symbol:MGG_00758 "Geranylgeranyl pyrop... 314 3.9e-28 1
UNIPROTKB|P24322 - symbol:al-3 "Geranylgeranyl pyrophosph... 311 8.2e-28 1
UNIPROTKB|C9J7M1 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 305 3.5e-27 1
ASPGD|ASPL0000044272 - symbol:AN1592 species:162425 "Emer... 277 3.3e-24 1
UNIPROTKB|C9J6G3 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 274 6.8e-24 1
ASPGD|ASPL0000012257 - symbol:AN8143 species:162425 "Emer... 233 1.8e-19 1
ASPGD|ASPL0000043760 - symbol:AN2407 species:162425 "Emer... 227 7.2e-18 1
UNIPROTKB|G4N8D6 - symbol:MGG_03432 "Geranylgeranyl pyrop... 196 1.7e-14 1
ASPGD|ASPL0000097840 - symbol:AN11985 species:162425 "Eme... 191 8.6e-14 1
SGD|S000005990 - symbol:BTS1 "Geranylgeranyl diphosphate ... 173 1.0e-12 1
CGD|CAL0004110 - symbol:BTS1 species:5476 "Candida albica... 169 2.8e-12 1
UNIPROTKB|G4N1M9 - symbol:MGG_13405 "Geranylgeranyl pyrop... 138 2.8e-08 1
UNIPROTKB|G4N1N9 - symbol:MGG_07506 "Geranylgeranyl pyrop... 104 8.8e-07 2
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 109 1.2e-05 1
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 102 0.00038 1
>FB|FBgn0019662 [details] [associations]
symbol:qm "quemao" species:7227 "Drosophila melanogaster"
[GO:0004337 "geranyltranstransferase activity" evidence=ISS]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=ISS]
[GO:0004311 "farnesyltranstransferase activity" evidence=ISS;NAS]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008354 "germ cell migration" evidence=IMP] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0022008 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0035050 GO:GO:0008354
ChiTaRS:RPL10 FlyBase:FBgn0019662 EMBL:AF049659
ProteinModelPortal:O61539 SMR:O61539 STRING:O61539 PRIDE:O61539
InParanoid:O61539 ArrayExpress:O61539 Bgee:O61539 Uniprot:O61539
Length = 338
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 93/143 (65%), Positives = 120/143 (83%)
Query: 1 MMAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFP 60
M+AIRLMQLFS K D++ L ILGLYFQ+RDDYCNL KEY+ENKSF EDLTEGKF FP
Sbjct: 169 MLAIRLMQLFSSNKEDYSKLTAILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFP 228
Query: 61 IIHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVA 120
+IHA++++ D+QV+ ILRQRT D+EVKKYCI+LL++ GSF++TR+VL+ LD AR+EVA
Sbjct: 229 VIHAVRTQKQDKQVLHILRQRTHDIEVKKYCITLLEKLGSFQYTRKVLESLDAEARSEVA 288
Query: 121 RLGGNPLLEAILDELLTWDTPDS 143
RLG NP ++ +L++LL+W T DS
Sbjct: 289 RLGSNPYMDRLLNKLLSWKTSDS 311
>UNIPROTKB|F1NHT9 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IEA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004337
GeneTree:ENSGT00390000010417 OMA:MLAIRLM EMBL:AADN02051945
EMBL:AADN02051946 IPI:IPI00589936 Ensembl:ENSGALT00000004102
Uniprot:F1NHT9
Length = 292
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 81/134 (60%), Positives = 102/134 (76%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+ LMQLFS+ K D L LGL+FQ+RDDY NL SKEYSENKSFCEDLTEGKFSFP
Sbjct: 153 LAVGLMQLFSNYKKDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPT 212
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVAR 121
IHAI S+P+ QV ILRQRT ++++KKYC+ L+ GSFE+TR LKEL+ A ++
Sbjct: 213 IHAIWSKPESTQVQNILRQRTENIDIKKYCVHYLENVGSFEYTRNTLKELESEAYKQIES 272
Query: 122 LGGNPLLEAILDEL 135
LGGNP L A++++L
Sbjct: 273 LGGNPELVALVEQL 286
>UNIPROTKB|E2R3P8 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:9453
GeneTree:ENSGT00390000010417 KO:K00804 OMA:LLEPYRY
EMBL:AAEX03002683 RefSeq:XP_003639028.1 RefSeq:XP_536340.2
Ensembl:ENSCAFT00000017968 GeneID:479198 KEGG:cfa:479198
Uniprot:E2R3P8
Length = 300
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 82/134 (61%), Positives = 99/134 (73%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+ LMQLFSD K D L LGL+FQ+RDDY NL SKEYSENKSFCEDLTEGKFSFP
Sbjct: 158 LAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPT 217
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVAR 121
IHAI SRP+ QV ILRQRT ++++KKYC+ L+ GSFE+TR LKEL+ A ++
Sbjct: 218 IHAIWSRPESTQVQNILRQRTENIDIKKYCVHYLENVGSFEYTRSTLKELESKAYKQIDA 277
Query: 122 LGGNPLLEAILDEL 135
GGNP L A++ L
Sbjct: 278 RGGNPELVALIKHL 291
>UNIPROTKB|F1RGX0 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004337 GeneTree:ENSGT00390000010417 KO:K00804
OMA:LLEPYRY EMBL:CU468332 RefSeq:XP_003483520.1
ProteinModelPortal:F1RGX0 Ensembl:ENSSSCT00000011119
GeneID:100739526 KEGG:ssc:100739526 Uniprot:F1RGX0
Length = 300
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 82/134 (61%), Positives = 99/134 (73%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+ LMQLFSD K D L LGL+FQ+RDDY NL SKEYSENKSFCEDLTEGKFSFP
Sbjct: 158 LAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPT 217
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVAR 121
IHAI SRP+ QV ILRQRT ++++KKYC+ L+ GSFE+TR LKEL+ A ++
Sbjct: 218 IHAIWSRPESTQVQNILRQRTENIDIKKYCVHYLENVGSFEYTRNTLKELESKAYKQIDA 277
Query: 122 LGGNPLLEAILDEL 135
GGNP L A++ L
Sbjct: 278 RGGNPELVALIKHL 291
>UNIPROTKB|P56966 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9913 "Bos taurus" [GO:0004311 "farnesyltranstransferase
activity" evidence=IDA] [GO:0006720 "isoprenoid metabolic process"
evidence=IDA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] [GO:0004161 "dimethylallyltranstransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
EMBL:BC120313 IPI:IPI00690042 RefSeq:NP_001073269.1
UniGene:Bt.71777 ProteinModelPortal:P56966 SMR:P56966 STRING:P56966
Ensembl:ENSBTAT00000017376 GeneID:780882 KEGG:bta:780882 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 InParanoid:P56966 KO:K00804 OMA:MLAIRLM
OrthoDB:EOG4CG08P NextBio:20924524 GO:GO:0006720 Uniprot:P56966
Length = 300
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 82/134 (61%), Positives = 99/134 (73%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+ LMQLFSD K D L LGL+FQ+RDDY NL SKEYSENKSFCEDLTEGKFSFP
Sbjct: 158 LAVGLMQLFSDYKEDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPT 217
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVAR 121
IHAI SRP+ QV ILRQRT ++++KKYC+ L+ GSFE+TR LKEL+ A ++
Sbjct: 218 IHAIWSRPESTQVQNILRQRTENIDIKKYCVHYLENVGSFEYTRNTLKELESKAYKQIDA 277
Query: 122 LGGNPLLEAILDEL 135
GGNP L A++ L
Sbjct: 278 RGGNPELVALIKHL 291
>UNIPROTKB|A8MVQ8 [details] [associations]
symbol:GGPS1 "Geranylgeranyl diphosphate synthase 1,
isoform CRA_b" species:9606 "Homo sapiens" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CH471098 EMBL:AL391994
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HOVERGEN:HBG051729 UniGene:Hs.730768
HGNC:HGNC:4249 PharmGKB:PA28661 ChiTaRS:GGPS1 NextBio:35412
EMBL:AK293278 IPI:IPI00658186 SMR:A8MVQ8 STRING:A8MVQ8
Ensembl:ENST00000391855 Uniprot:A8MVQ8
Length = 246
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 82/134 (61%), Positives = 99/134 (73%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+ LMQLFSD K D L LGL+FQ+RDDY NL SKEYSENKSFCEDLTEGKFSFP
Sbjct: 104 LAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPT 163
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVAR 121
IHAI SRP+ QV ILRQRT ++++KKYC+ L+ GSFE+TR LKEL+ A ++
Sbjct: 164 IHAIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDA 223
Query: 122 LGGNPLLEAILDEL 135
GGNP L A++ L
Sbjct: 224 RGGNPELVALVKHL 237
>UNIPROTKB|O95749 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0033384 "geranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005829
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006695 EMBL:AL391994 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB017971 EMBL:AB019036 EMBL:AF125394
EMBL:AB016043 EMBL:AF057698 EMBL:BC005252 EMBL:BC067768
IPI:IPI00032892 RefSeq:NP_001032354.1 UniGene:Hs.730768 PDB:2Q80
PDBsum:2Q80 ProteinModelPortal:O95749 SMR:O95749 STRING:O95749
PhosphoSite:O95749 PaxDb:O95749 PRIDE:O95749 DNASU:9453
Ensembl:ENST00000282841 Ensembl:ENST00000358966
Ensembl:ENST00000476121 Ensembl:ENST00000488594 GeneID:9453
KEGG:hsa:9453 UCSC:uc001hwv.3 GeneCards:GC01P235490 HGNC:HGNC:4249
HPA:HPA029472 MIM:606982 neXtProt:NX_O95749 PharmGKB:PA28661
InParanoid:O95749 OMA:LLEPYRY PhylomeDB:O95749
BioCyc:MetaCyc:HS07859-MONOMER SABIO-RK:O95749 BindingDB:O95749
ChEMBL:CHEMBL4769 ChiTaRS:GGPS1 EvolutionaryTrace:O95749
GenomeRNAi:9453 NextBio:35412 ArrayExpress:O95749 Bgee:O95749
CleanEx:HS_GGPS1 Genevestigator:O95749 GermOnline:ENSG00000152904
Uniprot:O95749
Length = 300
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 82/134 (61%), Positives = 99/134 (73%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+ LMQLFSD K D L LGL+FQ+RDDY NL SKEYSENKSFCEDLTEGKFSFP
Sbjct: 158 LAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPT 217
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVAR 121
IHAI SRP+ QV ILRQRT ++++KKYC+ L+ GSFE+TR LKEL+ A ++
Sbjct: 218 IHAIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDA 277
Query: 122 LGGNPLLEAILDEL 135
GGNP L A++ L
Sbjct: 278 RGGNPELVALVKHL 291
>RGD|1359680 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10116 "Rattus norvegicus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO;ISS] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO;ISS] [GO:0008152 "metabolic process"
evidence=ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 RGD:1359680 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 KO:K00804 OMA:MLAIRLM OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB118237 EMBL:AB118238 EMBL:AB118239
EMBL:AB118240 EMBL:BC090327 IPI:IPI00363014 RefSeq:NP_001007627.1
UniGene:Rn.54975 ProteinModelPortal:Q6F596 SMR:Q6F596 STRING:Q6F596
Ensembl:ENSRNOT00000022483 GeneID:291211 KEGG:rno:291211
UCSC:RGD:1359680 InParanoid:Q6F596 NextBio:632273
ArrayExpress:Q6F596 Genevestigator:Q6F596
GermOnline:ENSRNOG00000016767 Uniprot:Q6F596
Length = 300
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 81/134 (60%), Positives = 99/134 (73%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+ LMQLFSD K D L LGL+FQ+RDDY NL SKEYSENKSFCEDLTEGKFSFP
Sbjct: 158 LAVGLMQLFSDYKEDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPT 217
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVAR 121
IHAI SRP+ QV ILRQRT ++++KKYC+ L+ GSFE+TR L+EL+ A ++
Sbjct: 218 IHAIWSRPESTQVQNILRQRTENIDIKKYCVQYLEDVGSFEYTRYTLRELEAKAYKQIEA 277
Query: 122 LGGNPLLEAILDEL 135
GGNP L A++ L
Sbjct: 278 CGGNPSLVALVKHL 291
>MGI|MGI:1341724 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10090 "Mus musculus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 MGI:MGI:1341724
GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 CTD:9453 GeneTree:ENSGT00390000010417
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 OMA:LLEPYRY EMBL:AB016044 EMBL:BC069913
IPI:IPI00123594 RefSeq:NP_034412.1 UniGene:Mm.148039
ProteinModelPortal:Q9WTN0 SMR:Q9WTN0 STRING:Q9WTN0
PhosphoSite:Q9WTN0 PaxDb:Q9WTN0 PRIDE:Q9WTN0
Ensembl:ENSMUST00000170957 GeneID:14593 KEGG:mmu:14593
InParanoid:Q9WTN0 NextBio:286348 Bgee:Q9WTN0 CleanEx:MM_GGPS1
Genevestigator:Q9WTN0 GermOnline:ENSMUSG00000021302 Uniprot:Q9WTN0
Length = 300
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 80/134 (59%), Positives = 98/134 (73%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+ LMQLFSD K D L LGL+FQ+RDDY NL SKEYSENKSFCEDLTEGKFSFP
Sbjct: 158 LAVGLMQLFSDYKEDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPT 217
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVAR 121
IHAI SRP+ QV ILRQRT ++++KKYC+ L+ GSF +TR L+EL+ A ++
Sbjct: 218 IHAIWSRPESTQVQNILRQRTENIDIKKYCVQYLEDVGSFAYTRHTLRELEAKAYKQIEA 277
Query: 122 LGGNPLLEAILDEL 135
GGNP L A++ L
Sbjct: 278 CGGNPSLVALVKHL 291
>ZFIN|ZDB-GENE-030131-8742 [details] [associations]
symbol:ggps1 "geranylgeranyl diphosphate synthase
1" species:7955 "Danio rerio" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 ZFIN:ZDB-GENE-030131-8742 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GeneTree:ENSGT00390000010417
EMBL:CU639409 EMBL:CU914439 EMBL:FP017283 IPI:IPI00481673
Ensembl:ENSDART00000097845 ArrayExpress:F1QX12 Bgee:F1QX12
Uniprot:F1QX12
Length = 350
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 80/134 (59%), Positives = 100/134 (74%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+ LMQLFSD K D L LGLYFQ+RDDY NL SKEYS NKSFCEDLTEGKFSFP
Sbjct: 200 LAVGLMQLFSDWKRDLKPLLDTLGLYFQIRDDYANLNSKEYSANKSFCEDLTEGKFSFPT 259
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVAR 121
IHAI S P+ QV ILRQRT ++++K+YC+ L++ GSF +TR+ L +L+V A +
Sbjct: 260 IHAIWSHPESTQVQNILRQRTENLDIKRYCVDYLEKVGSFAYTRQTLLDLEVEAYRLIKE 319
Query: 122 LGGNPLLEAILDEL 135
LGGNP LEA+++ L
Sbjct: 320 LGGNPELEALVEHL 333
>UNIPROTKB|Q9P885 [details] [associations]
symbol:carG "Geranylgeranyl pyrophosphate synthase"
species:29924 "Mucor circinelloides f. lusitanicus" [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0016117
"carotenoid biosynthetic process" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 EMBL:AJ276129 ProteinModelPortal:Q9P885 SMR:Q9P885
Uniprot:Q9P885
Length = 303
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 71/141 (50%), Positives = 100/141 (70%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+RLMQ S++ D+T L I+G++FQVRDDY NL S Y+ NK FCEDLTEGKFSFPI
Sbjct: 163 LAVRLMQAASESDIDYTPLVNIIGIHFQVRDDYMNLQSTSYTNNKGFCEDLTEGKFSFPI 222
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVAR 121
IHAI+ P +RQ++ I+ Q+ +EVKKY + ++ + GSFE+ RE L++ + + E+ R
Sbjct: 223 IHAIRKDPSNRQLLNIISQKPTSIEVKKYALEVIRKAGSFEYVREFLRQKEAESLKEIKR 282
Query: 122 LGGNPLLEAILDELLTWDTPD 142
LGGNPLLE ++ + T D
Sbjct: 283 LGGNPLLEKYIETIRVEATND 303
>ASPGD|ASPL0000062493 [details] [associations]
symbol:AN0654 species:162425 "Emericella nidulans"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA] [GO:0016114
"terpenoid biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:BN001308 GO:GO:0016740
EMBL:AACD01000010 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000169461 KO:K00804 OrthoDB:EOG4QVGMM
RefSeq:XP_658258.1 ProteinModelPortal:Q5BFM6 SMR:Q5BFM6
STRING:Q5BFM6 EnsemblFungi:CADANIAT00002021 GeneID:2876433
KEGG:ani:AN0654.2 OMA:ICDDYLN Uniprot:Q5BFM6
Length = 396
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 60/114 (52%), Positives = 82/114 (71%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A++LMQ S T D L +LGL FQ+ DDY NL Y++NK CEDLTEGKFSFPI
Sbjct: 229 LAVKLMQAESSTGKDCVALVNVLGLVFQICDDYLNLSDTTYTQNKGLCEDLTEGKFSFPI 288
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSA 115
IH+I+S P + Q+I ILRQRT+D EVK+Y + ++ GSF+HT++V+++L A
Sbjct: 289 IHSIRSNPGNHQLINILRQRTKDEEVKRYALQYMESTGSFKHTQDVVRQLRARA 342
>DICTYBASE|DDB_G0293588 [details] [associations]
symbol:ggps1 "geranylgeranyl diphosphate synthase 1"
species:44689 "Dictyostelium discoideum" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;ISS] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA;ISS] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0033386
"geranylgeranyl diphosphate biosynthetic process" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 dictyBase:DDB_G0293588 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AAFI02000218 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K00804
OMA:MLAIRLM RefSeq:XP_629028.1 HSSP:O95749
ProteinModelPortal:Q54BK1 SMR:Q54BK1 STRING:Q54BK1
EnsemblProtists:DDB0233098 GeneID:8629314 KEGG:ddi:DDB_G0293588
ProtClustDB:CLSZ2429239 Uniprot:Q54BK1
Length = 303
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 58/134 (43%), Positives = 91/134 (67%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+ +RL+Q FSD +++ L LG+Y+Q+RDD NL S +Y +NKSFCED++EGKFSFPI
Sbjct: 165 LGLRLLQAFSDNNTNYIDLVEDLGMYYQIRDDLINLVSVDYQQNKSFCEDISEGKFSFPI 224
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVAR 121
IHAI + +D ++++IL+Q+T D VK++ + + GS E+T + L L ++
Sbjct: 225 IHAINADSNDNRLLRILKQKTEDRSVKEHALEYIKSKGSLEYTEKKLNVLKEKIIKQIND 284
Query: 122 LGGNPLLEAILDEL 135
LGGNP+L +++ L
Sbjct: 285 LGGNPILMKLMESL 298
>UNIPROTKB|G4NEM8 [details] [associations]
symbol:MGG_00758 "Geranylgeranyl pyrophosphate synthase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CM001235 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00804
RefSeq:XP_003718242.1 ProteinModelPortal:G4NEM8 SMR:G4NEM8
EnsemblFungi:MGG_00758T0 GeneID:2674748 KEGG:mgr:MGG_00758
Uniprot:G4NEM8
Length = 412
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 61/115 (53%), Positives = 83/115 (72%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+ I+LMQ S +D LA ++GL FQ+RDDY NL S+EYS NK CEDLTEGKFSFP+
Sbjct: 272 LGIKLMQAESAFPTDCIPLANLIGLIFQIRDDYQNLFSREYSNNKGMCEDLTEGKFSFPV 331
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSAR 116
IH+I+S P + Q++ IL+Q+T D VK Y +S +++ GSFE+T++VL L AR
Sbjct: 332 IHSIRSNPANLQLLNILKQKTTDEGVKNYAVSYMEKTGSFEYTKKVLTVLIERAR 386
>UNIPROTKB|P24322 [details] [associations]
symbol:al-3 "Geranylgeranyl pyrophosphate synthase"
species:367110 "Neurospora crassa OR74A" [GO:0004311
"farnesyltranstransferase activity" evidence=ISS] [GO:0006720
"isoprenoid metabolic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 HOGENOM:HOG000169461 KO:K00804
GO:GO:0006720 EMBL:U20940 EMBL:BX294018 EMBL:AABX02000014
EMBL:S74011 PIR:S15662 RefSeq:XP_960695.2 ProteinModelPortal:P24322
SMR:P24322 STRING:P24322 EnsemblFungi:EFNCRT00000004018
GeneID:3876842 KEGG:ncr:NCU01427 OMA:VAYMEST OrthoDB:EOG4QVGMM
Uniprot:P24322
Length = 433
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 59/115 (51%), Positives = 83/115 (72%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+ I+LMQ S + D L I+GL FQ+ DDY NL ++EY+ NK CEDLTEGKFSFP+
Sbjct: 280 LGIKLMQAESRSPVDCVPLVNIIGLIFQIADDYHNLWNREYTANKGMCEDLTEGKFSFPV 339
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSAR 116
IH+I+S P + Q++ IL+Q+T D EVK+Y ++ ++ GSFE+TR+V+K L AR
Sbjct: 340 IHSIRSNPSNMQLLNILKQKTGDEEVKRYAVAYMESTGSFEYTRKVIKVLVDRAR 394
>UNIPROTKB|C9J7M1 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00945938
ProteinModelPortal:C9J7M1 SMR:C9J7M1 STRING:C9J7M1
Ensembl:ENST00000471812 ArrayExpress:C9J7M1 Bgee:C9J7M1
Uniprot:C9J7M1
Length = 242
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 59/85 (69%), Positives = 67/85 (78%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+ LMQLFSD K D L LGL+FQ+RDDY NL SKEYSENKSFCEDLTEGKFSFP
Sbjct: 158 LAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPT 217
Query: 62 IHAIQSRPDDRQVIQILRQRTRDVE 86
IHAI SRP+ QV ILRQRT +++
Sbjct: 218 IHAIWSRPESTQVQNILRQRTENID 242
>ASPGD|ASPL0000044272 [details] [associations]
symbol:AN1592 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0019748 "secondary
metabolic process" evidence=IEP;IGC] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001307
EMBL:AACD01000025 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000169461 OrthoDB:EOG4QVGMM
RefSeq:XP_659196.1 ProteinModelPortal:Q5BCY8
EnsemblFungi:CADANIAT00008225 GeneID:2875291 KEGG:ani:AN1592.2
OMA:CAAIANE Uniprot:Q5BCY8
Length = 397
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 60/138 (43%), Positives = 87/138 (63%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
M +RL+Q S D L +LGLYFQ+ DDY N+ ++ + K F EDLTEGKFSFPI
Sbjct: 254 MIVRLLQTSSRQVIDVEQLVDVLGLYFQILDDYKNIREEKMAAQKGFFEDLTEGKFSFPI 313
Query: 62 IHAIQSRPDDRQ-VIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVSARTEVA 120
HAI +R ++ +LR +T D+++K+ + +LD GS ++TREVL LD AR+ +
Sbjct: 314 CHAIGEGAKNRTALLHMLRLKTDDMKIKQEAVCILDNAGSLDYTREVLYGLDRKARSLLR 373
Query: 121 RLGG-NPLLEAILDELLT 137
NP +EA+LD +L+
Sbjct: 374 EFKTPNPFMEALLDAMLS 391
>UNIPROTKB|C9J6G3 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00946064
ProteinModelPortal:C9J6G3 SMR:C9J6G3 STRING:C9J6G3
Ensembl:ENST00000497327 ArrayExpress:C9J6G3 Bgee:C9J6G3
Uniprot:C9J6G3
Length = 230
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 53/73 (72%), Positives = 58/73 (79%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+A+ LMQLFSD K D L LGL+FQ+RDDY NL SKEYSENKSFCEDLTEGKFSFP
Sbjct: 158 LAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPT 217
Query: 62 IHAIQSRPDDRQV 74
IHAI SRP+ QV
Sbjct: 218 IHAIWSRPESTQV 230
>ASPGD|ASPL0000012257 [details] [associations]
symbol:AN8143 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001302 EMBL:AACD01000141
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000169461 KO:K00804 OrthoDB:EOG4QVGMM RefSeq:XP_681412.1
ProteinModelPortal:Q5AU87 STRING:Q5AU87
EnsemblFungi:CADANIAT00004178 GeneID:2868962 KEGG:ani:AN8143.2
OMA:INSANYA Uniprot:Q5AU87
Length = 355
Score = 233 (87.1 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 57/128 (44%), Positives = 80/128 (62%)
Query: 2 MAIRLMQLFSDTKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPI 61
+AI+L+QL SD +F +RDDY NL S +Y++NK F ED+TEGKFS+PI
Sbjct: 217 LAIKLIQLESDV-DEF------------IRDDYQNLQSDQYAKNKGFGEDITEGKFSYPI 263
Query: 62 IHAIQSRP-----DDR--QVIQILRQRTRDVEVKKYCISLLDRFGSFEHTREVLKELDVS 114
+H+I+S D Q++ ILRQ+T D VKKY I +L++ GSFE TR+ L++L
Sbjct: 264 VHSIRSSSRTGVGSDSSLQLLSILRQKTEDEAVKKYTIQILEKTGSFEFTRQKLRDLTAR 323
Query: 115 ARTEVARL 122
AR + L
Sbjct: 324 ARDMLTEL 331
>ASPGD|ASPL0000043760 [details] [associations]
symbol:AN2407 species:162425 "Emericella nidulans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001307
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACD01000039 KO:K00804 RefSeq:XP_660011.1
ProteinModelPortal:Q5BAM3 STRING:Q5BAM3
EnsemblFungi:CADANIAT00009111 GeneID:2874783 KEGG:ani:AN2407.2
HOGENOM:HOG000164961 OrthoDB:EOG4CJZRF Uniprot:Q5BAM3
Length = 675
Score = 227 (85.0 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 54/142 (38%), Positives = 82/142 (57%)
Query: 2 MAIRLMQLFSDTKS--DFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSF 59
+ +RL+++ S+++ + L +LG Y+Q+RDDY NL S+EY+ K FCEDL+EGKFSF
Sbjct: 530 LVLRLLEVESESEPNPELMHLFTLLGRYYQIRDDYLNLASEEYTAKKGFCEDLSEGKFSF 589
Query: 60 PIIHAIQS--RPDDRQVIQILRQRTRD--VEVKKYCISLLDRFGSFEHTREVLKELDVSA 115
P+IH +Q+ P+ + I R D VE+K++ + + + GS HT VL L A
Sbjct: 590 PLIHLLQNIANPEPIRGILFRRDNATDLSVEMKQFVLDEMKKAGSLTHTEAVLNGL-FDA 648
Query: 116 RTEV-----ARLGGNPLLEAIL 132
E+ A +G N L L
Sbjct: 649 MLEILDNLEANIGPNKKLRIFL 670
>UNIPROTKB|G4N8D6 [details] [associations]
symbol:MGG_03432 "Geranylgeranyl pyrophosphate synthetase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000092 InterPro:IPR005630 Pfam:PF00348 Pfam:PF03936
PROSITE:PS00723 GO:GO:0000287 GO:GO:0010333 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CM001234
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
RefSeq:XP_003716502.1 ProteinModelPortal:G4N8D6
EnsemblFungi:MGG_03432T0 GeneID:2676530 KEGG:mgr:MGG_03432
Uniprot:G4N8D6
Length = 711
Score = 196 (74.1 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 46/133 (34%), Positives = 74/133 (55%)
Query: 13 TKSDFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPIIHAIQSRPDDR 72
T++ F + + GLY+QVRDDY N+ S EY++ K F EDL E KFS+ ++H ++RPD
Sbjct: 576 TRAAFAAFSHLSGLYYQVRDDYLNITSAEYADKKGFAEDLDEQKFSYMLVHLARARPDMM 635
Query: 73 QVIQILRQRTRD-----VEVKKYCISLLDRFGSFEHTREVLKELDVSARTEV----ARLG 123
++ + + RD E K+Y + LL G+ + TR++L + E+ A G
Sbjct: 636 VQVEGVFRSMRDGKAEVAESKRYLVGLLRASGTVDATRKLLLGWQDAIVREIDALQAHFG 695
Query: 124 G-NPLLEAILDEL 135
NP L +++ L
Sbjct: 696 APNPSLRLLMESL 708
>ASPGD|ASPL0000097840 [details] [associations]
symbol:AN11985 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 INTERPRO:IPR002818 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001301
EMBL:AACD01000113 Pfam:PF01965 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 RefSeq:XP_664414.1
ProteinModelPortal:Q5AY20 EnsemblFungi:CADANIAT00007607
GeneID:2870670 KEGG:ani:AN6810.2 HOGENOM:HOG000216975
OrthoDB:EOG42JS1R Uniprot:Q5AY20
Length = 933
Score = 191 (72.3 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 43/98 (43%), Positives = 63/98 (64%)
Query: 18 TTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPIIHAIQSRPDDRQVIQI 77
+ L+ LG +FQ+RDDY NL S EY+ K FCEDL E KFSFP+IHA+ ++P + Q+ I
Sbjct: 527 SNLSDSLGEFFQIRDDYKNL-SSEYTGQKGFCEDLDECKFSFPLIHALNTQPKNVQLRGI 585
Query: 78 LRQRTR----DVEVKKYCISLLDRFGSFEHTREVLKEL 111
L+Q D+ +K+ + L GS E+T + ++EL
Sbjct: 586 LQQSRSPGGLDIPLKETVLQHLRDAGSLEYTDKKMQEL 623
>SGD|S000005990 [details] [associations]
symbol:BTS1 "Geranylgeranyl diphosphate synthase"
species:4932 "Saccharomyces cerevisiae" [GO:0004337
"geranyltranstransferase activity" evidence=IEA] [GO:0016117
"carotenoid biosynthetic process" evidence=IEA] [GO:0033386
"geranylgeranyl diphosphate biosynthetic process" evidence=IEA]
[GO:0045337 "farnesyl diphosphate biosynthetic process"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA;ISS;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016114 "terpenoid biosynthetic process" evidence=IGI;IMP;IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 SGD:S000005990
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0015031 EMBL:BK006949 GO:GO:0016114 EMBL:U39205
GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 GeneTree:ENSGT00390000010417
HOGENOM:HOG000169461 KO:K00804 OMA:MLAIRLM OrthoDB:EOG4QVGMM
EMBL:U31632 EMBL:AY692852 PIR:S60921 RefSeq:NP_015256.1 PDB:2DH4
PDB:2E8T PDB:2E8U PDB:2E8V PDB:2E8W PDB:2E8X PDB:2E90 PDB:2E91
PDB:2E92 PDB:2E93 PDB:2E94 PDB:2E95 PDB:2Z4V PDB:2Z4W PDB:2Z4X
PDB:2Z4Y PDB:2Z4Z PDB:2Z50 PDB:2Z52 PDB:2Z78 PDB:2Z7H PDB:2Z7I
PDB:2ZEU PDB:2ZEV PDBsum:2DH4 PDBsum:2E8T PDBsum:2E8U PDBsum:2E8V
PDBsum:2E8W PDBsum:2E8X PDBsum:2E90 PDBsum:2E91 PDBsum:2E92
PDBsum:2E93 PDBsum:2E94 PDBsum:2E95 PDBsum:2Z4V PDBsum:2Z4W
PDBsum:2Z4X PDBsum:2Z4Y PDBsum:2Z4Z PDBsum:2Z50 PDBsum:2Z52
PDBsum:2Z78 PDBsum:2Z7H PDBsum:2Z7I PDBsum:2ZEU PDBsum:2ZEV
ProteinModelPortal:Q12051 SMR:Q12051 IntAct:Q12051 STRING:Q12051
PaxDb:Q12051 EnsemblFungi:YPL069C GeneID:856036 KEGG:sce:YPL069C
CYGD:YPL069c BioCyc:MetaCyc:MONOMER-13701 SABIO-RK:Q12051
ChEMBL:CHEMBL1075251 EvolutionaryTrace:Q12051 NextBio:980968
Genevestigator:Q12051 GermOnline:YPL069C Uniprot:Q12051
Length = 335
Score = 173 (66.0 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 40/120 (33%), Positives = 65/120 (54%)
Query: 2 MAIRLMQLFSDTKSDFTTLA---GILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFS 58
+ +RLM+ S + +L +LG+ +Q+RDDY NL + S K F ED+TEGK S
Sbjct: 176 LTLRLMEALSPSSHHGHSLVPFINLLGIIYQIRDDYLNLKDFQMSSEKGFAEDITEGKLS 235
Query: 59 FPIIHAIQ------SRPDDRQVIQILRQRTRDVEVKKYCISLLD-RFGSFEHTREVLKEL 111
FPI+HA+ ++++IL RT D ++K I +L+ S +T+ + +L
Sbjct: 236 FPIVHALNFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKNFINQL 295
>CGD|CAL0004110 [details] [associations]
symbol:BTS1 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016114 "terpenoid biosynthetic
process" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0004110 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000199 HOGENOM:HOG000169461 KO:K00804 RefSeq:XP_711426.1
ProteinModelPortal:Q59NY1 STRING:Q59NY1 GeneID:3646982
KEGG:cal:CaO19.6674 Uniprot:Q59NY1
Length = 332
Score = 169 (64.5 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 48/146 (32%), Positives = 77/146 (52%)
Query: 2 MAIRLMQLFSDTKSD--FTTLAGILGLYFQVRDDYCNLCSKEYSENK-SFCEDLTEGKFS 58
+AI+L+ L+SD K + +LA ++G+ +QVRDDY NL +YS K + CEDL EGK S
Sbjct: 185 LAIKLLSLYSDVKENDQLISLANLMGILYQVRDDYLNLVDAKYSAMKGTTCEDLIEGKLS 244
Query: 59 FPIIHAIQSRPDDRQVIQIL------RQRTRDVEVKKYCISLL-DRFGSFEHTREVLKEL 111
PI+H +++ D V +IL R + +S + + S E+T ++K L
Sbjct: 245 LPILHCLRTTKDS-PVHKILYDYDSSSDRVSQNSLIDLSLSFMKNESKSLEYTLNLIKVL 303
Query: 112 DVSARTEVARL--GGNPLLEAILDEL 135
+ R + + N L I++ L
Sbjct: 304 EKKLRQLILKYPESENSALLKIVERL 329
>UNIPROTKB|G4N1M9 [details] [associations]
symbol:MGG_13405 "Geranylgeranyl pyrophosphate synthetase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CM001233 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 RefSeq:XP_003711408.1
ProteinModelPortal:G4N1M9 EnsemblFungi:MGG_13405T0 GeneID:5050328
KEGG:mgr:MGG_13405 Uniprot:G4N1M9
Length = 728
Score = 138 (53.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 34/103 (33%), Positives = 54/103 (52%)
Query: 16 DFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPIIHAIQSRPDDRQVI 75
+FT L G +FQVRDDY N S EY K F DL E K S+ ++H + P+ R +
Sbjct: 597 EFTRL---FGRFFQVRDDYMNTLSTEYERQKGFASDLNEQKLSYMLVHMFEVYPETRDKV 653
Query: 76 Q-ILRQRTRD------VEVKK-YCISLLDRFGSFEHTREVLKE 110
+ + R V+V K Y +S+++ G+ T ++L++
Sbjct: 654 EGVFNTMRRGGVSEGAVDVAKTYILSMMEETGTNNFTYKLLQK 696
>UNIPROTKB|G4N1N9 [details] [associations]
symbol:MGG_07506 "Geranylgeranyl pyrophosphate synthetase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CM001233 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 RefSeq:XP_003711418.1
ProteinModelPortal:G4N1N9 EnsemblFungi:MGG_07506T0 GeneID:2683426
KEGG:mgr:MGG_07506 Uniprot:G4N1N9
Length = 757
Score = 104 (41.7 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 2 MAIRLMQLFSDTKS---DFTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFS 58
+A R+M+ S T++ D L +LG +Q+RDDY ++ S E S +DL EG F+
Sbjct: 600 LAARMMRA-SATQNRHLDACGLMSLLGRLYQLRDDYQDITS----ETLSTYDDLDEGSFT 654
Query: 59 FPIIHAIQSRPDDRQVIQI 77
P+IHA++ R D +Q+
Sbjct: 655 LPLIHALE-REDKHGGVQL 672
Score = 55 (24.4 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 86 EVKKYCISLLDRFGSFEHTREVLKELDVSARTEVARL 122
E K +L+ GS E+TR V+++L R +A L
Sbjct: 699 ETKLLVREILEEAGSLEYTRAVIRDLYDETRAALAAL 735
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 109 (43.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/138 (27%), Positives = 67/138 (48%)
Query: 5 RLMQLFSDTKSD----FTTLAGILGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFP 60
RL +FS + + L G++G FQ+ DD ++ S+ K D+ EG + P
Sbjct: 192 RLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLP 251
Query: 61 IIHAI-QSRPDDRQVIQILRQRTRD-VEVKKYCISLLDRFGSFEHTREVLKELDVSARTE 118
+++A+ +S PD ++ +L D EV++ ++LL ++VL + AR E
Sbjct: 252 MLYALRESGPDCARLRALLNGPVDDDAEVRE-ALTLLRASPGMARAKDVLAQYAAQARHE 310
Query: 119 VARLG---GNPLLEAILD 133
+A L G L A++D
Sbjct: 311 LALLPDVPGRRALAALVD 328
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 102 (41.0 bits), Expect = 0.00038, P = 0.00038
Identities = 25/89 (28%), Positives = 44/89 (49%)
Query: 24 LGLYFQVRDDYCNLCSKEYSENKSFCEDLTEGKFSFPIIHAIQSRPDD-RQVIQ-ILRQR 81
LG+ FQ+ DD + + E K DL EGK + P+IH + D+ R+ I ++ +
Sbjct: 201 LGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIHTLMKCSDEERETIAAVVEKE 260
Query: 82 TRDVEVKKYCISLLDRFGSFEHTREVLKE 110
+ + +L+ ++G E+T V E
Sbjct: 261 ILEPGDFESVFTLVHKYGGIEYTVSVANE 289
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 145 145 0.00071 103 3 11 22 0.42 31
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 578 (61 KB)
Total size of DFA: 139 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.93u 0.09s 16.02t Elapsed: 00:00:13
Total cpu time: 15.93u 0.09s 16.02t Elapsed: 00:00:13
Start: Thu Aug 15 14:41:42 2013 End: Thu Aug 15 14:41:55 2013