RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy388
         (94 letters)



>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid
           3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId:
           29760]}
          Length = 450

 Score = 28.2 bits (61), Expect = 0.15
 Identities = 7/27 (25%), Positives = 11/27 (40%), Gaps = 4/27 (14%)

Query: 10  DTPMSPIEKS----IWWIEYVLRHKGV 32
           D  + P   S    I  ++ V + K V
Sbjct: 424 DRAVGPKGSSTENFITLVDLVSKPKDV 450


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.140    0.400 

Gapped
Lambda     K      H
   0.267   0.0546    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 345,312
Number of extensions: 13258
Number of successful extensions: 44
Number of sequences better than 10.0: 1
Number of HSP's gapped: 44
Number of HSP's successfully gapped: 10
Length of query: 94
Length of database: 2,407,596
Length adjustment: 57
Effective length of query: 37
Effective length of database: 1,624,986
Effective search space: 60124482
Effective search space used: 60124482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.3 bits)