BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3880
(408 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 124/180 (68%), Gaps = 4/180 (2%)
Query: 5 EMVAHSRVVVRVKE-EGDDLKHLAAQVVDKGEA---AVQDIINSNPALRYIMRQLFEALE 60
++ H ++ + E L ++ KGE + + S R IMR L EA+
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVS 214
Query: 61 HVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRAN 120
+H +++VHRDLKPENILLDD M ++L+DFGF+ L+ GEKL +LCGTPGYLAPE+L+ +
Sbjct: 215 FLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCS 274
Query: 121 MFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISG 180
M E GYG+ VD+WACGVI++TLL G PPFWHR+Q++MLR IMEG+Y FSSPEW+D S
Sbjct: 275 MDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSS 334
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 78/100 (78%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GYLAPE+L+ +M E GYG+ VD+WACGVI++TLL G PPFWHR+Q++MLR IMEG+Y
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ 323
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
FSSPEW+D S KDLI +LL V PE R + ++AL H FF
Sbjct: 324 FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 118/172 (68%), Gaps = 5/172 (2%)
Query: 13 VVRVKE--EGDDLKHLAAQVVDKGEA---AVQDIINSNPALRYIMRQLFEALEHVHNHSV 67
++++K+ E + L ++ KGE + + S R IMR L E + +H ++
Sbjct: 73 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI 132
Query: 68 VHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATG 127
VHRDLKPENILLDD MN+KLTDFGF+ L GEKL ++CGTP YLAPE++ +M ++ G
Sbjct: 133 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPG 192
Query: 128 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
YG+ VD+W+ GVIMYTLL G PPFWHRKQM+MLR IM G Y F SPEW+D S
Sbjct: 193 YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYS 244
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 75/101 (74%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
YLAPE++ +M ++ GYG+ VD+W+ GVIMYTLL G PPFWHRKQM+MLR IM G Y
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 234
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
F SPEW+D S+ KDL+ + L+V P+ RY+ +EAL H FF
Sbjct: 235 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 118/172 (68%), Gaps = 5/172 (2%)
Query: 13 VVRVKE--EGDDLKHLAAQVVDKGEA---AVQDIINSNPALRYIMRQLFEALEHVHNHSV 67
++++K+ E + L ++ KGE + + S R IMR L E + +H ++
Sbjct: 86 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI 145
Query: 68 VHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATG 127
VHRDLKPENILLDD MN+KLTDFGF+ L GEKL ++CGTP YLAPE++ +M ++ G
Sbjct: 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPG 205
Query: 128 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
YG+ VD+W+ GVIMYTLL G PPFWHRKQM+MLR IM G Y F SPEW+D S
Sbjct: 206 YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYS 257
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 75/101 (74%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
YLAPE++ +M ++ GYG+ VD+W+ GVIMYTLL G PPFWHRKQM+MLR IM G Y
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 247
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
F SPEW+D S+ KDL+ + L+V P+ RY+ +EAL H FF
Sbjct: 248 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 117/172 (68%), Gaps = 5/172 (2%)
Query: 13 VVRVKE--EGDDLKHLAAQVVDKGEA---AVQDIINSNPALRYIMRQLFEALEHVHNHSV 67
++++K+ E + L ++ KGE + + S R IMR L E + +H ++
Sbjct: 86 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI 145
Query: 68 VHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATG 127
VHRDLKPENILLDD MN+KLTDFGF+ L GEKL +CGTP YLAPE++ +M ++ G
Sbjct: 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPG 205
Query: 128 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
YG+ VD+W+ GVIMYTLL G PPFWHRKQM+MLR IM G Y F SPEW+D S
Sbjct: 206 YGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYS 257
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 75/101 (74%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
YLAPE++ +M ++ GYG+ VD+W+ GVIMYTLL G PPFWHRKQM+MLR IM G Y
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 247
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
F SPEW+D S+ KDL+ + L+V P+ RY+ +EAL H FF
Sbjct: 248 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 99/172 (57%), Gaps = 17/172 (9%)
Query: 16 VKEEGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRD 71
+ EEG +L +V GE +DI+ S + + Q+ E++ H+H H +VHRD
Sbjct: 99 ISEEG--FHYLVFDLVTGGEL-FEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRD 155
Query: 72 LKPENILLDDQMN---VKLTDFGFA-RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATG 127
LKPEN+LL + VKL DFG A V + + GTPGYL+PEVLR +
Sbjct: 156 LKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD------P 209
Query: 128 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y F SPEW+ ++
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVT 261
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GYL+PEVLR + YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y
Sbjct: 198 GYLSPEVLRKD------PYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 251
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
F SPEW+ ++ + K+LI ++L + P R + +AL H
Sbjct: 252 FPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKH 288
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 112/216 (51%), Gaps = 23/216 (10%)
Query: 6 MVAHSRVVV---RVKEEGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEA 58
++ HS +V + EEG +L +V GE +DI+ S + ++Q+ EA
Sbjct: 59 LLKHSNIVRLHDSISEEG--FHYLVFDLVTGGEL-FEDIVAREYYSEADASHCIQQILEA 115
Query: 59 LEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFA-RVLKKGEKLMDLCGTPGYLAP 114
+ H H VVHRDLKPEN+LL + VKL DFG A V + GTPGYL+P
Sbjct: 116 VLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 115 EVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPE 174
EVLR YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y F SPE
Sbjct: 176 EVLRKE------AYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPE 229
Query: 175 WNDIS---GYLAPEVLRANMFEDATGYGQAVDVWAC 207
W+ ++ L ++L N + T + W C
Sbjct: 230 WDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVC 265
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GYL+PEVLR YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y
Sbjct: 171 GYLSPEVLRKE------AYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 224
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSF 278
F SPEW+ ++ + K+LI ++L + P R + EAL H +
Sbjct: 225 FPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 99/172 (57%), Gaps = 17/172 (9%)
Query: 16 VKEEGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRD 71
+ EEG +L +V GE +DI+ S + ++Q+ EA+ H H VVHRD
Sbjct: 90 ISEEGH--HYLIFDLVTGGEL-FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRD 146
Query: 72 LKPENILLDDQMN---VKLTDFGFA-RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATG 127
LKPEN+LL ++ VKL DFG A V + + GTPGYL+PEVLR +
Sbjct: 147 LKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD------P 200
Query: 128 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y F SPEW+ ++
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVT 252
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GYL+PEVLR + YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y
Sbjct: 189 GYLSPEVLRKD------PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 242
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
F SPEW+ ++ + KDLI K+L + P R + EAL H +
Sbjct: 243 FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 98/172 (56%), Gaps = 17/172 (9%)
Query: 16 VKEEGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRD 71
+ EEG +L +V GE +DI+ S + ++Q+ E++ H H + +VHRD
Sbjct: 72 ISEEG--FHYLVFDLVTGGEL-FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRD 128
Query: 72 LKPENILLDDQMN---VKLTDFGFA-RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATG 127
LKPEN+LL + VKL DFG A V + GTPGYL+PEVLR +
Sbjct: 129 LKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD------P 182
Query: 128 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y F SPEW+ ++
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVT 234
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GYL+PEVLR + YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y
Sbjct: 171 GYLSPEVLRKD------PYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
F SPEW+ ++ + KDLI K+L + P R + EAL H +
Sbjct: 225 FPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 98/172 (56%), Gaps = 17/172 (9%)
Query: 16 VKEEGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRD 71
+ EEG +L +V GE +DI+ S + ++Q+ E++ H H + +VHRD
Sbjct: 72 ISEEG--FHYLVFDLVTGGEL-FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRD 128
Query: 72 LKPENILLDDQMN---VKLTDFGFA-RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATG 127
LKPEN+LL + VKL DFG A V + GTPGYL+PEVLR +
Sbjct: 129 LKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD------P 182
Query: 128 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y F SPEW+ ++
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVT 234
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GYL+PEVLR + YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y
Sbjct: 171 GYLSPEVLRKD------PYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
F SPEW+ ++ + KDLI K+L + P R + EAL H +
Sbjct: 225 FPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 99/172 (57%), Gaps = 17/172 (9%)
Query: 16 VKEEGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRD 71
+ EEG +L +V GE +DI+ S + ++Q+ EA+ H H VVHR+
Sbjct: 79 ISEEGH--HYLIFDLVTGGEL-FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRN 135
Query: 72 LKPENILLDDQMN---VKLTDFGFA-RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATG 127
LKPEN+LL ++ VKL DFG A V + + GTPGYL+PEVLR +
Sbjct: 136 LKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD------P 189
Query: 128 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y F SPEW+ ++
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVT 241
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GYL+PEVLR + YG+ VD+WACGVI+Y LLVG PPFW Q + + I G Y
Sbjct: 178 GYLSPEVLRKD------PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
F SPEW+ ++ + KDLI K+L + P R + EAL H +
Sbjct: 232 FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 84/132 (63%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQ---MNVKLTDFGFARVLKKGEKLMDLCG 107
I++Q+F + ++H H++VHRDLKPENILL+ + ++K+ DFG + ++ K+ D G
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVLR Y + DVW+ GVI+Y LL G PPF+ + + +L+ + GK
Sbjct: 186 TAYYIAPEVLRGT-------YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK 238
Query: 168 YSFSSPEWNDIS 179
Y+F P+W IS
Sbjct: 239 YAFDLPQWRTIS 250
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVLR Y + DVW+ GVI+Y LL G PPF+ + + +L+ + GKY+F
Sbjct: 189 YIAPEVLRGT-------YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF 241
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P+W IS+D KDLIRK+L P R + + L H
Sbjct: 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 100/176 (56%), Gaps = 16/176 (9%)
Query: 13 VVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHS 66
+VR+ + + + +L +V GE +DI+ S + ++Q+ E++ + H++
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGEL-FEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 67 VVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFE 123
+VHR+LKPEN+LL + VKL DFG A + E GTPGYL+PEVL+ +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD--- 182
Query: 124 DATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
Y + VD+WACGVI+Y LLVG PPFW Q + I G Y + SPEW+ ++
Sbjct: 183 ---PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVT 235
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GYL+PEVL+ + Y + VD+WACGVI+Y LLVG PPFW Q + I G Y
Sbjct: 172 GYLSPEVLKKD------PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 225
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEAL 274
+ SPEW+ ++ + K LI +L V P+ R + +AL
Sbjct: 226 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 260
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 9/133 (6%)
Query: 50 YIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLC 106
+ ++Q+ E++ + H++ +VHR+LKPEN+LL + VKL DFG A + E
Sbjct: 132 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA 191
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTPGYL+PEVL+ + Y + VD+WACGVI+Y LLVG PPFW Q + I G
Sbjct: 192 GTPGYLSPEVLKKD------PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 245
Query: 167 KYSFSSPEWNDIS 179
Y + SPEW+ ++
Sbjct: 246 AYDYPSPEWDTVT 258
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GYL+PEVL+ + Y + VD+WACGVI+Y LLVG PPFW Q + I G Y
Sbjct: 195 GYLSPEVLKKD------PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 248
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEAL 274
+ SPEW+ ++ + K LI +L V P+ R + +AL
Sbjct: 249 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 283
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 100/176 (56%), Gaps = 16/176 (9%)
Query: 13 VVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHS 66
+VR+ + + + +L +V GE +DI+ S + ++Q+ E++ + H++
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGEL-FEDIVAREFYSEADASHCIQQILESIAYCHSNG 124
Query: 67 VVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFE 123
+VHR+LKPEN+LL + VKL DFG A + E GTPGYL+PEVL+ +
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD--- 181
Query: 124 DATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
Y + VD+WACGVI+Y LLVG PPFW Q + I G Y + SPEW+ ++
Sbjct: 182 ---PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVT 234
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GYL+PEVL+ + Y + VD+WACGVI+Y LLVG PPFW Q + I G Y
Sbjct: 171 GYLSPEVLKKD------PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 224
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEAL 274
+ SPEW+ ++ + K LI +L V P+ R + +AL
Sbjct: 225 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 259
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 100/176 (56%), Gaps = 16/176 (9%)
Query: 13 VVRVKE--EGDDLKHLAAQVVDKGEAAVQDIIN----SNPALRYIMRQLFEALEHVHNHS 66
+VR+ + + + +L +V GE +DI+ S + ++Q+ E++ + H++
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGEL-FEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 67 VVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFE 123
+VHR+LKPEN+LL + VKL DFG A + E GTPGYL+PEVL+ +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD--- 182
Query: 124 DATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
Y + VD+WACGVI+Y LLVG PPFW Q + I G Y + SPEW+ ++
Sbjct: 183 ---PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVT 235
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GYL+PEVL+ + Y + VD+WACGVI+Y LLVG PPFW Q + I G Y
Sbjct: 172 GYLSPEVLKKD------PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 225
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEAL 274
+ SPEW+ ++ + K LI +L V P+ R + +AL
Sbjct: 226 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 260
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 84/132 (63%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQ---MNVKLTDFGFARVLKKGEKLMDLCG 107
I++Q+F + ++H H++VHRDLKPENILL+ + ++K+ DFG + ++ K+ D G
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVLR Y + DVW+ GVI+Y LL G PPF+ + + +L+ + GK
Sbjct: 186 TAYYIAPEVLRGT-------YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK 238
Query: 168 YSFSSPEWNDIS 179
Y+F P+W IS
Sbjct: 239 YAFDLPQWRTIS 250
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVLR Y + DVW+ GVI+Y LL G PPF+ + + +L+ + GKY+F
Sbjct: 189 YIAPEVLRGT-------YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF 241
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P+W IS+D KDLIRK+L P R + + L H
Sbjct: 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 84/132 (63%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQ---MNVKLTDFGFARVLKKGEKLMDLCG 107
I++Q+F + ++H H++VHRDLKPENILL+ + ++K+ DFG + ++ K+ D G
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVLR Y + DVW+ GVI+Y LL G PPF+ + + +L+ + GK
Sbjct: 186 TAYYIAPEVLRGT-------YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK 238
Query: 168 YSFSSPEWNDIS 179
Y+F P+W IS
Sbjct: 239 YAFDLPQWRTIS 250
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVLR Y + DVW+ GVI+Y LL G PPF+ + + +L+ + GKY+F
Sbjct: 189 YIAPEVLRGT-------YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF 241
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P+W IS+D KDLIRK+L P R + + L H
Sbjct: 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 83/132 (62%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQ---MNVKLTDFGFARVLKKGEKLMDLCG 107
IM+Q+ + ++H H++VHRD+KPENILL+++ +N+K+ DFG + K KL D G
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLG 210
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVL+ Y + DVW+CGVIMY LL G PPF + +++ + +GK
Sbjct: 211 TAYYIAPEVLKKK-------YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGK 263
Query: 168 YSFSSPEWNDIS 179
Y F +W +IS
Sbjct: 264 YYFDFNDWKNIS 275
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 11/128 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL+ Y + DVW+CGVIMY LL G PPF + +++ + +GKY F
Sbjct: 214 YIAPEVLKKK-------YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF 266
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTASR 300
+W +IS++ K+LI+ +L R + +EALN + K + +I K D KT
Sbjct: 267 DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWI--KKYANNIN--KSDQKTLCG 322
Query: 301 KLSKINQL 308
LS + +
Sbjct: 323 ALSNMRKF 330
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 93/161 (57%), Gaps = 12/161 (7%)
Query: 25 HLAAQVVDKGE---AAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL-- 79
+L Q+V GE V+ + ++RQ+ +A+ ++H +VHRDLKPEN+L
Sbjct: 96 YLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYS 155
Query: 80 -DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACG 138
D++ + ++DFG +++ KG+ + CGTPGY+APEVL Y +AVD W+ G
Sbjct: 156 QDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQK------PYSKAVDCWSIG 209
Query: 139 VIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
VI Y LL G PPF+ + I++ +Y F SP W+DIS
Sbjct: 210 VIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDIS 250
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
MEGK S GY+APEVL Y +AVD W+ GVI Y LL G PPF+
Sbjct: 172 MEGKGDVMSTACG-TPGYVAPEVLAQK------PYSKAVDCWSIGVIAYILLCGYPPFYD 224
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
+ I++ +Y F SP W+DIS+ KD IR L+ P RY+ ++A H
Sbjct: 225 ENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARH 277
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 84/132 (63%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCG 107
I++Q+ + ++H H++VHRDLKPEN+LL+ + +K+ DFG + V + +K+ + G
Sbjct: 141 IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLG 200
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVLR Y + DVW+ GVI++ LL G PPF + +LR + +GK
Sbjct: 201 TAYYIAPEVLRKK-------YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGK 253
Query: 168 YSFSSPEWNDIS 179
Y+F SPEW ++S
Sbjct: 254 YTFDSPEWKNVS 265
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVLR Y + DVW+ GVI++ LL G PPF + +LR + +GKY+F
Sbjct: 204 YIAPEVLRKK-------YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTF 256
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
SPEW ++SE KDLI+++L + R S ++AL H
Sbjct: 257 DSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 9/132 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENIL---LDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
++ Q+ +A++++H+ +VHRDLKPEN+L LD+ + ++DFG +++ G L CG
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TPGY+APEVL Y +AVD W+ GVI Y LL G PPF+ + I++ +
Sbjct: 181 TPGYVAPEVLAQK------PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 168 YSFSSPEWNDIS 179
Y F SP W+DIS
Sbjct: 235 YEFDSPYWDDIS 246
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GY+APEVL Y +AVD W+ GVI Y LL G PPF+ + I++ +Y
Sbjct: 183 GYVAPEVLAQK------PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH-PKLFDQDI-----EPIKK 293
F SP W+DIS+ KD IR L+ PE R++ ++AL H + D++I E IKK
Sbjct: 237 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKK 296
Query: 294 DYKTASRK 301
++ + K
Sbjct: 297 NFAKSKWK 304
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 9/132 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENIL---LDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
++ Q+ +A++++H+ +VHRDLKPEN+L LD+ + ++DFG +++ G L CG
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TPGY+APEVL Y +AVD W+ GVI Y LL G PPF+ + I++ +
Sbjct: 181 TPGYVAPEVLAQK------PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 168 YSFSSPEWNDIS 179
Y F SP W+DIS
Sbjct: 235 YEFDSPYWDDIS 246
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GY+APEVL Y +AVD W+ GVI Y LL G PPF+ + I++ +Y
Sbjct: 183 GYVAPEVLAQK------PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
F SP W+DIS+ KD IR L+ PE R++ ++AL H
Sbjct: 237 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 9/132 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENIL---LDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
++ Q+ +A++++H+ +VHRDLKPEN+L LD+ + ++DFG +++ G L CG
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TPGY+APEVL Y +AVD W+ GVI Y LL G PPF+ + I++ +
Sbjct: 181 TPGYVAPEVLAQK------PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 168 YSFSSPEWNDIS 179
Y F SP W+DIS
Sbjct: 235 YEFDSPYWDDIS 246
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GY+APEVL Y +AVD W+ GVI Y LL G PPF+ + I++ +Y
Sbjct: 183 GYVAPEVLAQK------PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH-PKLFDQDI-----EPIKK 293
F SP W+DIS+ KD IR L+ PE R++ ++AL H + D++I E IKK
Sbjct: 237 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKK 296
Query: 294 DYKTASRK 301
++ + K
Sbjct: 297 NFAKSKWK 304
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 9/132 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENIL---LDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
++ Q+ +A++++H+ +VHRDLKPEN+L LD+ + ++DFG +++ G L CG
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TPGY+APEVL Y +AVD W+ GVI Y LL G PPF+ + I++ +
Sbjct: 181 TPGYVAPEVLAQK------PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
Query: 168 YSFSSPEWNDIS 179
Y F SP W+DIS
Sbjct: 235 YEFDSPYWDDIS 246
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GY+APEVL Y +AVD W+ GVI Y LL G PPF+ + I++ +Y
Sbjct: 183 GYVAPEVLAQK------PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH-PKLFDQDI-----EPIKK 293
F SP W+DIS+ KD IR L+ PE R++ ++AL H + D++I E IKK
Sbjct: 237 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKK 296
Query: 294 DYKTASRK 301
++ + K
Sbjct: 297 NFAKSKWK 304
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 81/132 (61%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCG 107
IM+Q+ ++H H++VHRDLKPEN+LL+ + +K+ DFG + + G K+ + G
Sbjct: 109 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG 168
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVLR Y + DVW+CGVI+Y LL G PPF + +L+ + +GK
Sbjct: 169 TAYYIAPEVLRKK-------YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGK 221
Query: 168 YSFSSPEWNDIS 179
+SF P+W +S
Sbjct: 222 FSFDPPDWTQVS 233
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVLR Y + DVW+CGVI+Y LL G PPF + +L+ + +GK+SF
Sbjct: 172 YIAPEVLRKK-------YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSF 224
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P+W +S++ K L++ +L P R S +EALNH
Sbjct: 225 DPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNH 260
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 81/132 (61%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCG 107
IM+Q+ ++H H++VHRDLKPEN+LL+ + +K+ DFG + + G K+ + G
Sbjct: 126 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG 185
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVLR Y + DVW+CGVI+Y LL G PPF + +L+ + +GK
Sbjct: 186 TAYYIAPEVLRKK-------YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGK 238
Query: 168 YSFSSPEWNDIS 179
+SF P+W +S
Sbjct: 239 FSFDPPDWTQVS 250
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVLR Y + DVW+CGVI+Y LL G PPF + +L+ + +GK+SF
Sbjct: 189 YIAPEVLRKK-------YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSF 241
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P+W +S++ K L++ +L P R S +EALNH
Sbjct: 242 DPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNH 277
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 13/161 (8%)
Query: 25 HLAAQVVDKGEA---AVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL-- 79
+L Q+V GE ++ + + +++Q+ A++++H + +VHRDLKPEN+L
Sbjct: 82 YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLT 141
Query: 80 -DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACG 138
++ + +TDFG +++ + G + CGTPGY+APEVL Y +AVD W+ G
Sbjct: 142 PEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQK------PYSKAVDCWSIG 194
Query: 139 VIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 179
VI Y LL G PPF+ + + I EG Y F SP W+DIS
Sbjct: 195 VITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDIS 235
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 64/121 (52%), Gaps = 13/121 (10%)
Query: 163 IMEGKYSFSSPEWNDI-------SGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 215
IM + S E N I GY+APEVL Y +AVD W+ GVI Y LL
Sbjct: 148 IMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQK------PYSKAVDCWSIGVITYILL 201
Query: 216 VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275
G PPF+ + + I EG Y F SP W+DISE KD I LL P +RY+ ++AL+
Sbjct: 202 CGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261
Query: 276 H 276
H
Sbjct: 262 H 262
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R +Q+ A+E+ H H +VHRDLKPEN+LLD+ +NVK+ DFG + ++ G L CG+
Sbjct: 116 RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 175
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APEV+ ++ G VDVW+CGVI+Y +L PF V+ +NI G Y
Sbjct: 176 PNYAAPEVISGKLYA-----GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY 230
Query: 169 S---FSSP 173
+ F SP
Sbjct: 231 TLPKFLSP 238
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 19/124 (15%)
Query: 160 LRNIMEG----KYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 215
L NIM K S SP Y APEV+ ++ G VDVW+CGVI+Y +L
Sbjct: 159 LSNIMTDGNFLKTSCGSP------NYAAPEVISGKLYA-----GPEVDVWSCGVILYVML 207
Query: 216 VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275
PF V+ +NI G Y+ P++ +S LI+++LIV P +R S+ E +
Sbjct: 208 CRRLPFDDESIPVLFKNISNGVYTL--PKF--LSPGAAGLIKRMLIVNPLNRISIHEIMQ 263
Query: 276 HSFF 279
+F
Sbjct: 264 DDWF 267
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R +Q+ A+E+ H H +VHRDLKPEN+LLD+ +NVK+ DFG + ++ G L CG+
Sbjct: 115 RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 174
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APEV+ ++ G VDVW+CGVI+Y +L PF V+ +NI G Y
Sbjct: 175 PNYAAPEVISGKLYA-----GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY 229
Query: 169 S---FSSP 173
+ F SP
Sbjct: 230 TLPKFLSP 237
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 19/124 (15%)
Query: 160 LRNIMEG----KYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 215
L NIM K S SP Y APEV+ ++ G VDVW+CGVI+Y +L
Sbjct: 158 LSNIMTDGNFLKTSCGSP------NYAAPEVISGKLYA-----GPEVDVWSCGVILYVML 206
Query: 216 VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275
PF V+ +NI G Y+ P++ +S LI+++LIV P +R S+ E +
Sbjct: 207 CRRLPFDDESIPVLFKNISNGVYTL--PKF--LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262
Query: 276 HSFF 279
+F
Sbjct: 263 DDWF 266
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQ---MNVKLTDFGFARVLKKGEKLMDLCG 107
I+RQ+ + ++H + +VHRDLKPEN+LL+ + N+++ DFG + + +K+ D G
Sbjct: 154 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG 213
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVL Y + DVW+ GVI+Y LL GCPPF + +L+ + +GK
Sbjct: 214 TAYYIAPEVLHGT-------YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK 266
Query: 168 YSFSSPEWNDIS 179
Y+F P+W +S
Sbjct: 267 YTFELPQWKKVS 278
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL Y + DVW+ GVI+Y LL GCPPF + +L+ + +GKY+F
Sbjct: 217 YIAPEVLHGT-------YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF 269
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
P+W +SE KDLIRK+L P R S ++AL+H +
Sbjct: 270 ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 310
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQ---MNVKLTDFGFARVLKKGEKLMDLCG 107
I+RQ+ + ++H + +VHRDLKPEN+LL+ + N+++ DFG + + +K+ D G
Sbjct: 155 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG 214
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVL Y + DVW+ GVI+Y LL GCPPF + +L+ + +GK
Sbjct: 215 TAYYIAPEVLHGT-------YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK 267
Query: 168 YSFSSPEWNDIS 179
Y+F P+W +S
Sbjct: 268 YTFELPQWKKVS 279
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL Y + DVW+ GVI+Y LL GCPPF + +L+ + +GKY+F
Sbjct: 218 YIAPEVLHGT-------YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF 270
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
P+W +SE KDLIRK+L P R S ++AL+H +
Sbjct: 271 ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 311
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQ---MNVKLTDFGFARVLKKGEKLMDLCG 107
I+RQ+ + ++H + +VHRDLKPEN+LL+ + N+++ DFG + + +K+ D G
Sbjct: 131 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG 190
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVL Y + DVW+ GVI+Y LL GCPPF + +L+ + +GK
Sbjct: 191 TAYYIAPEVLHGT-------YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK 243
Query: 168 YSFSSPEWNDIS 179
Y+F P+W +S
Sbjct: 244 YTFELPQWKKVS 255
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL Y + DVW+ GVI+Y LL GCPPF + +L+ + +GKY+F
Sbjct: 194 YIAPEVLHGT-------YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF 246
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
P+W +SE KDLIRK+L P R S ++AL+H +
Sbjct: 247 ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 287
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R +Q+ A+E+ H H +VHRDLKPEN+LLD+ +NVK+ DFG + ++ G L CG+
Sbjct: 110 RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 169
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APEV+ ++ G VDVW+CGVI+Y +L PF V+ +NI G Y
Sbjct: 170 PNYAAPEVISGKLYA-----GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY 224
Query: 169 S---FSSP 173
+ F SP
Sbjct: 225 TLPKFLSP 232
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 19/124 (15%)
Query: 160 LRNIMEG----KYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 215
L NIM K S SP Y APEV+ ++ G VDVW+CGVI+Y +L
Sbjct: 153 LSNIMTDGNFLKTSCGSP------NYAAPEVISGKLYA-----GPEVDVWSCGVILYVML 201
Query: 216 VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275
PF V+ +NI G Y+ P++ +S LI+++LIV P +R S+ E +
Sbjct: 202 CRRLPFDDESIPVLFKNISNGVYTL--PKF--LSPGAAGLIKRMLIVNPLNRISIHEIMQ 257
Query: 276 HSFF 279
+F
Sbjct: 258 DDWF 261
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R +Q+ A+E+ H H +VHRDLKPEN+LLD+ +NVK+ DFG + ++ G L CG+
Sbjct: 106 RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 165
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APEV+ ++ G VDVW+CGVI+Y +L PF V+ +NI G Y
Sbjct: 166 PNYAAPEVISGKLYA-----GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY 220
Query: 169 S---FSSP 173
+ F SP
Sbjct: 221 TLPKFLSP 228
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 19/124 (15%)
Query: 160 LRNIMEG----KYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 215
L NIM K S SP Y APEV+ ++ G VDVW+CGVI+Y +L
Sbjct: 149 LSNIMTDGNFLKTSCGSP------NYAAPEVISGKLYA-----GPEVDVWSCGVILYVML 197
Query: 216 VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275
PF V+ +NI G Y+ P++ +S LI+++LIV P +R S+ E +
Sbjct: 198 CRRLPFDDESIPVLFKNISNGVYTL--PKF--LSPGAAGLIKRMLIVNPLNRISIHEIMQ 253
Query: 276 HSFF 279
+F
Sbjct: 254 DDWF 257
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 8/149 (5%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R + +Q+ A+++ H H VVHRDLKPEN+LLD MN K+ DFG + ++ GE L D CG+
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGS 173
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APEV+ ++ G VD+W+CGVI+Y LL G PF + + I G
Sbjct: 174 PNYAAPEVISGRLYA-----GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG-- 226
Query: 169 SFSSPEW-NDISGYLAPEVLRANMFEDAT 196
F PE+ N L +L+ + + AT
Sbjct: 227 VFYIPEYLNRSVATLLMHMLQVDPLKRAT 255
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y APEV+ ++ G VD+W+CGVI+Y LL G PF + + I G F
Sbjct: 176 YAAPEVISGRLYA-----GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VF 228
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
PE+ ++ L+ +L V P R ++K+ H +F
Sbjct: 229 YIPEY--LNRSVATLLMHMLQVDPLKRATIKDIREHEWF 265
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPG 110
Q+ A++++H + ++HRDLKPEN+LL Q +K+TDFG +++L + + LCGTP
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 181
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 169
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 182 YLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 170 FSSPEWNDIS 179
F W ++S
Sbjct: 239 FIPEVWAEVS 248
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 239
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 182 YLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIE 289
F W ++SE DL++KLL+V P+ R++ +EAL HP L D+D++
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR----HPWLQDEDMK 284
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPG 110
Q+ A++++H + ++HRDLKPEN+LL Q +K+TDFG +++L + + LCGTP
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 181
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 169
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 182 YLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 170 FSSPEWNDIS 179
F W ++S
Sbjct: 239 FIPEVWAEVS 248
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 239
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 182 YLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIE 289
F W ++SE DL++KLL+V P+ R++ +EAL HP L D+D++
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR----HPWLQDEDMK 284
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPG 110
Q+ A++++H + ++HRDLKPEN+LL Q +K+TDFG +++L + + LCGTP
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 180
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 169
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 181 YLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 237
Query: 170 FSSPEWNDIS 179
F W ++S
Sbjct: 238 FIPEVWAEVS 247
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 239
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 181 YLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 237
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIE 289
F W ++SE DL++KLL+V P+ R++ +EAL HP L D+D++
Sbjct: 238 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR----HPWLQDEDMK 283
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPG 110
Q+ A++++H + ++HRDLKPEN+LL Q +K+TDFG +++L + + LCGTP
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 181
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 169
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 182 YLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 170 FSSPEWNDIS 179
F W ++S
Sbjct: 239 FIPEVWAEVS 248
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 239
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 182 YLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIE 289
F W ++SE DL++KLL+V P+ R++ +EAL HP L D+D++
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR----HPWLQDEDMK 284
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPG 110
Q+ A++++H + ++HRDLKPEN+LL Q +K+TDFG +++L + + LCGTP
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 187
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 169
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 188 YLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 244
Query: 170 FSSPEWNDIS 179
F W ++S
Sbjct: 245 FIPEVWAEVS 254
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 239
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 188 YLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 244
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIE 289
F W ++SE DL++KLL+V P+ R++ +EAL HP L D+D++
Sbjct: 245 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR----HPWLQDEDMK 290
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQ---MNVKLTDFGFARVLKKGEKLMDLCG 107
I+RQ+ + ++H + +VHRDLKPEN+LL+ + N+++ DFG + + +K+ D G
Sbjct: 137 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIG 196
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVL Y + DVW+ GVI+Y LL GCPPF + +L+ + +GK
Sbjct: 197 TAYYIAPEVLHGT-------YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK 249
Query: 168 YSFSSPEWNDIS 179
Y+F P+W +S
Sbjct: 250 YTFELPQWKKVS 261
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL Y + DVW+ GVI+Y LL GCPPF + +L+ + +GKY+F
Sbjct: 200 YIAPEVLHGT-------YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF 252
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
P+W +SE KDLIRK+L P R S ++AL+H +
Sbjct: 253 ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQ---MNVKLTDFGFARVLKKGEKLMDLCG 107
I+RQ+ + + H + +VHRDLKPEN+LL+ + N+++ DFG + + +K D G
Sbjct: 131 IIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIG 190
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y+APEVL Y + DVW+ GVI+Y LL GCPPF + +L+ + +GK
Sbjct: 191 TAYYIAPEVLHGT-------YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK 243
Query: 168 YSFSSPEWNDIS 179
Y+F P+W +S
Sbjct: 244 YTFELPQWKKVS 255
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL Y + DVW+ GVI+Y LL GCPPF + +L+ + +GKY+F
Sbjct: 194 YIAPEVLHGT-------YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF 246
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
P+W +SE KDLIRK L P R S ++AL+H +
Sbjct: 247 ELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQT 287
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPG 110
Q+ A++++H + ++HRDLKPEN+LL Q +K+TDFG +++L + + LCGTP
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 320
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 169
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 321 YLAPEVLVS---VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 377
Query: 170 FSSPEWNDIS 179
F W ++S
Sbjct: 378 FIPEVWAEVS 387
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 239
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 321 YLAPEVLVS---VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 377
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIE 289
F W ++SE DL++KLL+V P+ R++ +EAL HP L D+D++
Sbjct: 378 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR----HPWLQDEDMK 423
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPG 110
Q+ A++++H + ++HRDLKPEN+LL Q +K+TDFG +++L + + LCGTP
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPT 306
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 169
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 307 YLAPEVLVS---VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363
Query: 170 FSSPEWNDIS 179
F W ++S
Sbjct: 364 FIPEVWAEVS 373
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 239
YLAPEVL + GY +AVD W+ GVI++ L G PPF HR Q+ + I GKY+
Sbjct: 307 YLAPEVLVS---VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIE 289
F W ++SE DL++KLL+V P+ R++ +EAL HP L D+D++
Sbjct: 364 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR----HPWLQDEDMK 409
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 84/149 (56%), Gaps = 8/149 (5%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R + +Q+ A+++ H H VVHRDLKPEN+LLD MN K+ DFG + ++ GE L CG+
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGS 173
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APEV+ ++ G VD+W+CGVI+Y LL G PF + + I G
Sbjct: 174 PNYAAPEVISGRLYA-----GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG-- 226
Query: 169 SFSSPEW-NDISGYLAPEVLRANMFEDAT 196
F PE+ N L +L+ + + AT
Sbjct: 227 VFYIPEYLNRSVATLLMHMLQVDPLKRAT 255
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y APEV+ ++ G VD+W+CGVI+Y LL G PF + + I G F
Sbjct: 176 YAAPEVISGRLYA-----GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VF 228
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
PE+ ++ L+ +L V P R ++K+ H +F
Sbjct: 229 YIPEY--LNRSVATLLMHMLQVDPLKRATIKDIREHEWF 265
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 68/103 (66%), Gaps = 5/103 (4%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R +Q+ A+E+ H H +VHRDLKPEN+LLDD +NVK+ DFG + ++ G L CG+
Sbjct: 111 RRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGS 170
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
P Y APEV+ ++ G VDVW+CG+++Y +LVG PF
Sbjct: 171 PNYAAPEVINGKLYA-----GPEVDVWSCGIVLYVMLVGRLPF 208
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 24/169 (14%)
Query: 160 LRNIMEG----KYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 215
L NIM K S SP Y APEV+ ++ G VDVW+CG+++Y +L
Sbjct: 154 LSNIMTDGNFLKTSCGSP------NYAAPEVINGKLYA-----GPEVDVWSCGIVLYVML 202
Query: 216 VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275
VG PF + + + Y P++ +S + LIR++++ P R +++E
Sbjct: 203 VGRLPFDDEFIPNLFKKVNSCVYVM--PDF--LSPGAQSLIRRMIVADPMQRITIQEIRR 258
Query: 276 HSFFHPKLFD--QDIEPIKKDYKTASRKLSKINQLTEFQ--FIILVVRA 320
+F+ L D + +E ++ Y SR +SK+ + F +I+ +R+
Sbjct: 259 DPWFNVNLPDYLRPMEEVQGSY-ADSRIVSKLGEAMGFSEDYIVEALRS 306
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 91/155 (58%), Gaps = 17/155 (10%)
Query: 29 QVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD---QMNV 85
++V+KG + +D ++ ++Q+ EA+ ++H + +VHRDLKPEN+L +
Sbjct: 138 RIVEKGYYSERDAADA-------VKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPL 190
Query: 86 KLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145
K+ DFG +++++ + +CGTPGY APE+LR YG VD+W+ G+I Y LL
Sbjct: 191 KIADFGLSKIVEHQVLMKTVCGTPGYCAPEILR------GCAYGPEVDMWSVGIITYILL 244
Query: 146 VGCPPFW-HRKQMVMLRNIMEGKYSFSSPEWNDIS 179
G PF+ R M R I+ +Y F SP W+++S
Sbjct: 245 CGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS 279
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKY 238
GY APE+LR YG VD+W+ G+I Y LL G PF+ R M R I+ +Y
Sbjct: 215 GYCAPEILRG------CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY 268
Query: 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTA 298
F SP W+++S + KDL+RKL+++ P+ R + +AL HP + + + D TA
Sbjct: 269 YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ----HPWVTGKAANFVHMD--TA 322
Query: 299 SRKLSKINQLTEFQFIILVVRAAVRI 324
+KL + N + + + V A+ R+
Sbjct: 323 QKKLQEFNARRKLKAAVKAVVASSRL 348
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 14/178 (7%)
Query: 22 DLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
D L ++V + +A + S + MRQ+ EAL + H+++++HRD+KPEN+LL
Sbjct: 109 DGADLCFEIVKRADAG---FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLAS 165
Query: 82 QMN---VKLTDFGFARVL-KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
+ N VKL DFG A L + G GTP ++APEV++ YG+ VDVW C
Sbjct: 166 KENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKRE------PYGKPVDVWGC 219
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDA 195
GVI++ LL GC PF+ K+ + I++GKY + +W+ IS V R M + A
Sbjct: 220 GVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPA 276
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 16/150 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
++APEV++ YG+ VDVW CGVI++ LL GC PF+ K+ + I++GKY
Sbjct: 199 FMAPEVVKRE------PYGKPVDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKM 251
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTASR 300
+ +W+ ISE KDL+R++L++ P +R +V EALN HP L ++D K
Sbjct: 252 NPRQWSHISESAKDLVRRMLMLDPAERITVYEALN----HPWLKERDRYAYKIHLPETVE 307
Query: 301 KLSKINQLTEFQFIILVVRAAVRISRLKYN 330
+L K N + + +L +S K+N
Sbjct: 308 QLRKFNARRKLKGAVLAA-----VSSHKFN 332
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK-KGEKL 102
+ P RY MRQ + ++++HN+ V+HRDLK N+ L+D M+VK+ DFG A ++ GE+
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
DLCGTP Y+APEVL G+ VD+W+ G I+YTLLVG PPF
Sbjct: 200 KDLCGTPNYIAPEVLCKK------GHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 164 MEGKYSFSSPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220
+ K F D+ G Y+APEVL G+ VD+W+ G I+YTLLVG PP
Sbjct: 188 LATKIEFDGERKKDLCGTPNYIAPEVLCKK------GHSFEVDIWSLGCILYTLLVGKPP 241
Query: 221 FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
F I + +YS I+ LIR++L P R SV E L FF
Sbjct: 242 FETSCLKETYIRIKKNEYSVP----RHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 7/109 (6%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK-KGEKL 102
+ P RY MRQ + ++++HN+ V+HRDLK N+ L+D M+VK+ DFG A ++ GE+
Sbjct: 124 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 183
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
DLCGTP Y+APEVL G+ VD+W+ G I+YTLLVG PPF
Sbjct: 184 KDLCGTPNYIAPEVLCKK------GHSFEVDIWSLGCILYTLLVGKPPF 226
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 164 MEGKYSFSSPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220
+ K F D+ G Y+APEVL G+ VD+W+ G I+YTLLVG PP
Sbjct: 172 LATKIEFDGERKKDLCGTPNYIAPEVLCKK------GHSFEVDIWSLGCILYTLLVGKPP 225
Query: 221 FWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
F I + +YS I+ LIR++L P R SV E L FF
Sbjct: 226 FETSCLKETYIRIKKNEYSVP----RHINPVASALIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 79/139 (56%), Gaps = 13/139 (9%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R + +Q+ +++ H H VVHRDLKPEN+LLD MN K+ DFG + ++ GE L CG+
Sbjct: 119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGS 178
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APEV+ ++ G VD+W+ GVI+Y LL G PF + + I +G
Sbjct: 179 PNYAAPEVISGRLYA-----GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG-- 231
Query: 169 SFSSPEWNDISGYLAPEVL 187
F +P+ YL P V+
Sbjct: 232 IFYTPQ------YLNPSVI 244
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
Y APEV+ ++ G VD+W+ GVI+Y LL G PF + + I +G
Sbjct: 180 NYAAPEVISGRLYA-----GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--I 232
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH---PK-LFDQD 287
F +P++ ++ L++ +L V P R ++K+ H +F PK LF +D
Sbjct: 233 FYTPQY--LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPED 282
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 85/139 (61%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D+Q +++TDFGFA+ +K +
Sbjct: 126 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG--RTW 183
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 184 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 237
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 238 VSGKVRFPSHFSSDLKDLL 256
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 191 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 244
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 245 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 284
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+++D Q +K+TDFGFA+ +K +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTW 197
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 198 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 252 VSGKVRFPSHFSSDLKDLL 270
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+++D Q +K+TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+++D Q +K+TDFGFA+ +K +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTW 197
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 198 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 252 VSGKVRFPSHFSSDLKDLL 270
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+++D Q +K+TDFGFA+ +K +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTW 197
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 198 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 252 VSGKVRFPSHFSSDLKDLL 270
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWF 297
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V + V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWF 297
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 197
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 198 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 252 VSGKVRFPSHFSSDLKDLL 270
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 197
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 198 TLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 252 VSGKVRFPSHFSSDLKDLL 270
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 197
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 198 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 252 VSGKVRFPSHFSSDLKDLL 270
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 197
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 198 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 252 VSGKVRFPSHFSSDLKDLL 270
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWF 298
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 197
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 198 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 252 VSGKVRFPSHFSSDLKDLL 270
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 197
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 198 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 252 VSGKVRFPSHFSSDLKDLL 270
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 132/309 (42%), Gaps = 85/309 (27%)
Query: 22 DLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
D L ++V + +A + S + MRQ+ EAL + H+++++HRD+KP +LL
Sbjct: 111 DGADLCFEIVKRADAG---FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS 167
Query: 82 QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141
+ N G G+G A+ + G++
Sbjct: 168 KENSAPVKLG-----------------------------------GFGVAIQLGESGLVA 192
Query: 142 YTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQA 201
VG P F +APEV++ YG+
Sbjct: 193 GGR-VGTPHF------------------------------MAPEVVKRE------PYGKP 215
Query: 202 VDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLI 261
VDVW CGVI++ LL GC PF+ K+ + I++GKY + +W+ ISE KDL+R++L+
Sbjct: 216 VDVWGCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHISESAKDLVRRMLM 274
Query: 262 VTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTASRKLSKINQLTEFQFIILVVRAA 321
+ P +R +V EALN HP L ++D K +L K N + + +L
Sbjct: 275 LDPAERITVYEALN----HPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAA--- 327
Query: 322 VRISRLKYN 330
+S K+N
Sbjct: 328 --VSSHKFN 334
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK-KGEKL 102
+ P RY MRQ + ++++HN+ V+HRDLK N+ L+D M+VK+ DFG A ++ GE+
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
LCGTP Y+APEVL G+ VD+W+ G I+YTLLVG PPF
Sbjct: 200 KTLCGTPNYIAPEVLCKK------GHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL G+ VD+W+ G I+YTLLVG PPF I + +YS
Sbjct: 208 YIAPEVLCKK------GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
I+ LIR++L P R SV E L FF
Sbjct: 262 P----RHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 132 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 189
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 190 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 243
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 244 VSGKVRFPSHFSSDLKDLL 262
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 197 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 250
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 251 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 160 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 217
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 218 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 272 VSGKVRFPSHFSSDLKDLL 290
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 225 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 278
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 279 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 125 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 182
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 183 TLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 236
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 237 VSGKVRFPSHFSSDLKDLL 255
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 190 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 243
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 244 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 283
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK-KGEKL 102
+ P RY MRQ + ++++HN+ V+HRDLK N+ L+D M+VK+ DFG A ++ GE+
Sbjct: 140 TEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
LCGTP Y+APEVL G+ VD+W+ G I+YTLLVG PPF
Sbjct: 200 KXLCGTPNYIAPEVLCKK------GHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL G+ VD+W+ G I+YTLLVG PPF I + +YS
Sbjct: 208 YIAPEVLCKK------GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
I+ LIR++L P R SV E L FF
Sbjct: 262 P----RHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K
Sbjct: 160 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA--TW 217
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 218 TLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 272 VSGKVRFPSHFSSDLKDLL 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 225 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 278
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 279 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +K+ DFGFA+ +K +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTW 197
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 198 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 252 VSGKVRFPSHFSSDLKDLL 270
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 131/305 (42%), Gaps = 85/305 (27%)
Query: 26 LAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNV 85
L ++V + +A + S + MRQ+ EAL + H+++++HRD+KP +LL + N
Sbjct: 113 LCFEIVKRADAG---FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 169
Query: 86 KLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145
G G+G A+ + G++
Sbjct: 170 APVKLG-----------------------------------GFGVAIQLGESGLVAGGR- 193
Query: 146 VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVW 205
VG P F +APEV++ YG+ VDVW
Sbjct: 194 VGTPHF------------------------------MAPEVVKRE------PYGKPVDVW 217
Query: 206 ACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPE 265
CGVI++ LL GC PF+ K+ + I++GKY + +W+ ISE KDL+R++L++ P
Sbjct: 218 GCGVILFILLSGCLPFYGTKER-LFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPA 276
Query: 266 DRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTASRKLSKINQLTEFQFIILVVRAAVRIS 325
+R +V EALN HP L ++D K +L K N + + +L +S
Sbjct: 277 ERITVYEALN----HPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAA-----VS 327
Query: 326 RLKYN 330
K+N
Sbjct: 328 SHKFN 332
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +K+ DFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +K+ DFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +K+ DFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+++D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+++D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIIISK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIIISK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
+ P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 AEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P R+ Q+ E++H+ +++RDLKPEN+++D Q +K+TDFGFA+ +K + L
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXL 199
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
CGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+
Sbjct: 200 CGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 166 GKYSFSSPEWNDISGYL 182
GK F S +D+ L
Sbjct: 254 GKVRFPSHFSSDLKDLL 270
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P R+ Q+ E++H+ +++RDLKPEN+++D Q +K+TDFGFA+ +K + L
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXL 198
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
CGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+
Sbjct: 199 CGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 166 GKYSFSSPEWNDISGYL 182
GK F S +D+ L
Sbjct: 253 GKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 92/161 (57%), Gaps = 18/161 (11%)
Query: 26 LAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN- 84
L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L +
Sbjct: 100 LFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN 154
Query: 85 --VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+KLTDFGFA+ L + C TP Y+APEVL Y ++ D+W+ GVIMY
Sbjct: 155 AILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVL------GPEKYDKSCDMWSLGVIMY 208
Query: 143 TLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 209 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 249
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ + M I G
Sbjct: 183 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 236
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E +NH +
Sbjct: 237 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K + L
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXL 198
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
CGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+
Sbjct: 199 CGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 166 GKYSFSSPEWNDISGYL 182
GK F S +D+ L
Sbjct: 253 GKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K + L
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXL 198
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
CGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+
Sbjct: 199 CGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 166 GKYSFSSPEWNDISGYL 182
GK F S +D+ L
Sbjct: 253 GKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K + L
Sbjct: 136 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXL 193
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
CGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+
Sbjct: 194 CGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 247
Query: 166 GKYSFSSPEWNDISGYL 182
GK F S +D+ L
Sbjct: 248 GKVRFPSHFSSDLKDLL 264
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 199 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 252
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 253 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 292
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K + L
Sbjct: 162 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXL 219
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
CGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+
Sbjct: 220 CGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 273
Query: 166 GKYSFSSPEWNDISGYL 182
GK F S +D+ L
Sbjct: 274 GKVRFPSHFSSDLKDLL 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 225 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 278
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 279 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K + L
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXL 198
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
CGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+
Sbjct: 199 CGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 166 GKYSFSSPEWNDISGYL 182
GK F S +D+ L
Sbjct: 253 GKVRFPSHFSSDLKDLL 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K + L
Sbjct: 142 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXL 199
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
CGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+
Sbjct: 200 CGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 166 GKYSFSSPEWNDISGYL 182
GK F S +D+ L
Sbjct: 254 GKVRFPSHFSSDLKDLL 270
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 18/161 (11%)
Query: 26 LAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN- 84
L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L +
Sbjct: 102 LFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN 156
Query: 85 --VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+KLTDFGFA+ L C TP Y+APEVL Y ++ D+W+ GVIMY
Sbjct: 157 AILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL------GPEKYDKSCDMWSLGVIMY 210
Query: 143 TLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 211 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 251
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ + M I G
Sbjct: 185 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 238
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E +NH +
Sbjct: 239 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K + L
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXL 198
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
CGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+
Sbjct: 199 CGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 166 GKYSFSSPEWNDISGYL 182
GK F S +D+ L
Sbjct: 253 GKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 18/161 (11%)
Query: 26 LAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN- 84
L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L +
Sbjct: 146 LFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN 200
Query: 85 --VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+KLTDFGFA+ L C TP Y+APEVL Y ++ D+W+ GVIMY
Sbjct: 201 AILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL------GPEKYDKSCDMWSLGVIMY 254
Query: 143 TLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 255 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ + M I G
Sbjct: 229 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 282
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E +NH +
Sbjct: 283 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 18/168 (10%)
Query: 19 EGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78
E D L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L
Sbjct: 100 ECLDGGELFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLL 154
Query: 79 LDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVW 135
+ +KLTDFGFA+ L C TP Y+APEVL Y ++ D+W
Sbjct: 155 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL------GPEKYDKSCDMW 208
Query: 136 ACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
+ GVIMY LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 209 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 256
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ + M I G
Sbjct: 190 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 243
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E +NH +
Sbjct: 244 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 18/161 (11%)
Query: 26 LAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN- 84
L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L +
Sbjct: 106 LFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN 160
Query: 85 --VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+KLTDFGFA+ L C TP Y+APEVL Y ++ D+W+ GVIMY
Sbjct: 161 AILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL------GPEKYDKSCDMWSLGVIMY 214
Query: 143 TLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 215 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 255
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ + M I G
Sbjct: 189 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 242
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E +NH +
Sbjct: 243 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K + L
Sbjct: 141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXL 198
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
CGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+
Sbjct: 199 CGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 166 GKYSFSSPEWNDISGYL 182
GK F S +D+ L
Sbjct: 253 GKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K + L
Sbjct: 134 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXL 191
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
CGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+
Sbjct: 192 CGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 245
Query: 166 GKYSFSSPEWNDISGYL 182
GK F S +D+ L
Sbjct: 246 GKVRFPSHFSSDLKDLL 262
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 197 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 250
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 251 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 92/165 (55%), Gaps = 18/165 (10%)
Query: 22 DLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
D L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L
Sbjct: 112 DGGELFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLLYTS 166
Query: 82 QMN---VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACG 138
+ +KLTDFGFA+ L C TP Y+APEVL Y ++ D+W+ G
Sbjct: 167 KRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL------GPEKYDKSCDMWSLG 220
Query: 139 VIMYTLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
VIMY LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 221 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 265
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ + M I G
Sbjct: 199 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 252
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E +NH +
Sbjct: 253 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 18/168 (10%)
Query: 19 EGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENIL 78
E D L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L
Sbjct: 101 ECLDGGELFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLL 155
Query: 79 LDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVW 135
+ +KLTDFGFA+ L C TP Y+APEVL Y ++ D+W
Sbjct: 156 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL------GPEKYDKSCDMW 209
Query: 136 ACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
+ GVIMY LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 210 SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 257
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ + M I G
Sbjct: 191 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 244
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E +NH +
Sbjct: 245 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 18/161 (11%)
Query: 26 LAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN- 84
L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L +
Sbjct: 152 LFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN 206
Query: 85 --VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+KLTDFGFA+ L C TP Y+APEVL Y ++ D+W+ GVIMY
Sbjct: 207 AILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL------GPEKYDKSCDMWSLGVIMY 260
Query: 143 TLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 261 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 301
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ + M I G
Sbjct: 235 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 288
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E +NH +
Sbjct: 289 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 18/161 (11%)
Query: 26 LAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN- 84
L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L +
Sbjct: 102 LFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN 156
Query: 85 --VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+KLTDFGFA+ L C TP Y+APEVL Y ++ D+W+ GVIMY
Sbjct: 157 AILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL------GPEKYDKSCDMWSLGVIMY 210
Query: 143 TLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 211 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 251
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ + M I G
Sbjct: 185 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 238
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E +NH +
Sbjct: 239 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 18/161 (11%)
Query: 26 LAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN- 84
L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L +
Sbjct: 100 LFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN 154
Query: 85 --VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+KLTDFGFA+ L C TP Y+APEVL Y ++ D+W+ GVIMY
Sbjct: 155 AILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL------GPEKYDKSCDMWSLGVIMY 208
Query: 143 TLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 209 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 249
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ + M I G
Sbjct: 183 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 236
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E +NH +
Sbjct: 237 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 18/161 (11%)
Query: 26 LAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN- 84
L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L +
Sbjct: 101 LFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN 155
Query: 85 --VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+KLTDFGFA+ L C TP Y+APEVL Y ++ D+W+ GVIMY
Sbjct: 156 AILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL------GPEKYDKSCDMWSLGVIMY 209
Query: 143 TLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 210 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 250
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ + M I G
Sbjct: 184 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 237
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E +NH +
Sbjct: 238 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+++D Q +K+TDFG A+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAP ++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPAIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAP ++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPAIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 97/186 (52%), Gaps = 39/186 (20%)
Query: 1 MEKGEMVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALE 60
ME GE+ + R++E GD Q + EAA IMR + A++
Sbjct: 89 MEGGELFS------RIQERGD-------QAFTEREAA------------EIMRDIGTAIQ 123
Query: 61 HVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVL 117
+H+H++ HRD+KPEN+L + +KLTDFGFA+ + L C TP Y+APEVL
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYVAPEVL 182
Query: 118 RANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSP 173
Y ++ D+W+ GVIMY LL G PPF+ M R I G+Y F +P
Sbjct: 183 ------GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 236
Query: 174 EWNDIS 179
EW+++S
Sbjct: 237 EWSEVS 242
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ M R I G
Sbjct: 176 YVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 229
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+Y F +PEW+++SED K LIR LL P +R ++ + +NH + + +
Sbjct: 230 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM 276
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 97/186 (52%), Gaps = 39/186 (20%)
Query: 1 MEKGEMVAHSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALE 60
ME GE+ + R++E GD Q + EAA IMR + A++
Sbjct: 108 MEGGELFS------RIQERGD-------QAFTEREAA------------EIMRDIGTAIQ 142
Query: 61 HVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVL 117
+H+H++ HRD+KPEN+L + +KLTDFGFA+ + L C TP Y+APEVL
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYVAPEVL 201
Query: 118 RANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSP 173
Y ++ D+W+ GVIMY LL G PPF+ M R I G+Y F +P
Sbjct: 202 ------GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255
Query: 174 EWNDIS 179
EW+++S
Sbjct: 256 EWSEVS 261
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEG 236
Y+APEVL Y ++ D+W+ GVIMY LL G PPF+ M R I G
Sbjct: 195 YVAPEVLGPE------KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 248
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+Y F +PEW+++SED K LIR LL P +R ++ + +NH + + +
Sbjct: 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM 295
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R RQ+ A+++ H +VHRDLK EN+LLD MN+K+ DFGF+ G KL + CG+
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGS 175
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 176 PPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R RQ+ A+++ H +VHRDLK EN+LLD MN+K+ DFGF+ G KL CG+
Sbjct: 117 RAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGS 176
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 177 PPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP LAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEALAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 15/103 (14%)
Query: 182 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS 241
LAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 205 LAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 242 SPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 259 S----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+++D Q +++TDFG A+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
LCGTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLCGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
L GTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLAGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R RQ+ A+++ H +VHRDLK EN+LLD MN+K+ DFGF+ G KL CG+
Sbjct: 114 RSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGS 173
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 174 PPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 228
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 86/162 (53%), Gaps = 14/162 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 176 YAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 230
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEP-IKKDYKTAS 299
P + +S D ++L+++ L++ P R ++++ + + + + +++P ++ + +
Sbjct: 231 --PFY--MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISD 286
Query: 300 RKLSKINQLTEFQFIILVVRAAVRISRLKYNHVPALSVTQGR 341
+K +I+ + + ++ + +S++KY+ + A + GR
Sbjct: 287 QK--RIDIMVGMGYSQEEIQES--LSKMKYDEITATYLLLGR 324
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R RQ+ A+++ H +VHRDLK EN+LLD MN+K+ DFGF+ G KL CG+
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGS 175
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 176 PPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R RQ+ A+++ H +VHRDLK EN+LLD MN+K+ DFGF+ G KL CG+
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGS 175
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 176 PPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R RQ+ A+++ H +VHRDLK EN+LLD MN+K+ DFGF+ G KL CG+
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGS 175
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 176 PPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S P R+ Q+ E++H+ +++RDLKPEN+L+D Q +++TDFGFA+ +K +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTW 196
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
L GTP YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I
Sbjct: 197 XLXGTPEYLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 164 MEGKYSFSSPEWNDISGYL 182
+ GK F S +D+ L
Sbjct: 251 VSGKVRFPSHFSSDLKDLL 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE++ + GY +AVD WA GV++Y + G PPF+ + + + I+ GK F
Sbjct: 204 YLAPEIILSK------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
S S D KDL+R LL V R+ V + NH +F
Sbjct: 258 PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R RQ+ A+++ H +VHRDLK EN+LLD MN+K+ DFGF+ G KL CG+
Sbjct: 109 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGS 168
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 169 PPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R RQ+ A+++ H +VHRDLK EN+LLD MN+K+ DFGF+ G KL CG
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGA 175
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 176 PPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R RQ+ A+++ H +VHRDLK EN+LLD MN+K+ DFGF+ G KL CG
Sbjct: 117 RSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGA 176
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 177 PPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 86/162 (53%), Gaps = 14/162 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 179 YAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 233
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEP-IKKDYKTAS 299
P + +S D ++L+++ L++ P R ++++ + + + + +++P ++ + +
Sbjct: 234 --PFY--MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISD 289
Query: 300 RKLSKINQLTEFQFIILVVRAAVRISRLKYNHVPALSVTQGR 341
+K +I+ + + ++ + +S++KY+ + A + GR
Sbjct: 290 QK--RIDIMVGMGYSQEEIQES--LSKMKYDEITATYLLLGR 327
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 17/147 (11%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL---DDQMNVKLTDFGFARVL-KKG 99
S YIMR+L A+ H+H+ VVHRDLKPEN+L +D + +K+ DFGFAR+
Sbjct: 104 SETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163
Query: 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMV 158
+ L C T Y APE+L N GY ++ D+W+ GVI+YT+L G PF H + +
Sbjct: 164 QPLKTPCFTLHYAAPELLNQN------GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT 217
Query: 159 ------MLRNIMEGKYSFSSPEWNDIS 179
+++ I +G +SF W ++S
Sbjct: 218 CTSAVEIMKKIKKGDFSFEGEAWKNVS 244
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMV------MLRNI 233
Y APE+L N GY ++ D+W+ GVI+YT+L G PF H + + +++ I
Sbjct: 175 YAAPELLNQN------GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI 228
Query: 234 MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDR 267
+G +SF W ++S++ KDLI+ LL V P R
Sbjct: 229 KKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKR 262
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
R RQ+ A+++ H +VHRDLK EN+LLD N+K+ DFGF+ G KL CG
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGA 175
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P Y APE+ + ++ G VDVW+ GVI+YTL+ G PF + + ++ GKY
Sbjct: 176 PPYAAPELFQGKKYD-----GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFA-RVLKKGEKL 102
+ P RY +RQ+ +++H + V+HRDLK N+ L++ + VK+ DFG A +V GE+
Sbjct: 115 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 174
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
LCGTP Y+APEVL G+ VDVW+ G IMYTLLVG PPF
Sbjct: 175 KTLCGTPNYIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 228
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRAN 190
I + +YS N ++ L ++L+ +
Sbjct: 229 IKKNEYSIPK-HINPVAASLIQKMLQTD 255
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL G+ VDVW+ G IMYTLLVG PPF I + +YS
Sbjct: 183 YIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 236
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
I+ LI+K+L P R ++ E LN FF
Sbjct: 237 P----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFA-RVLKKGEKL 102
+ P RY +RQ+ +++H + V+HRDLK N+ L++ + VK+ DFG A +V GE+
Sbjct: 115 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 174
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
LCGTP Y+APEVL G+ VDVW+ G IMYTLLVG PPF
Sbjct: 175 KTLCGTPNYIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 228
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRAN 190
I + +YS N ++ L ++L+ +
Sbjct: 229 IKKNEYSIPK-HINPVAASLIQKMLQTD 255
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL G+ VDVW+ G IMYTLLVG PPF I + +YS
Sbjct: 183 YIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 236
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
I+ LI+K+L P R ++ E LN FF
Sbjct: 237 P----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFA-RVLKKGEKL 102
+ P RY +RQ+ +++H + V+HRDLK N+ L++ + VK+ DFG A +V GE+
Sbjct: 119 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 178
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
LCGTP Y+APEVL G+ VDVW+ G IMYTLLVG PPF
Sbjct: 179 KTLCGTPNYIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 232
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRAN 190
I + +YS N ++ L ++L+ +
Sbjct: 233 IKKNEYSIPK-HINPVAASLIQKMLQTD 259
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL G+ VDVW+ G IMYTLLVG PPF I + +YS
Sbjct: 187 YIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 240
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
I+ LI+K+L P R ++ E LN FF
Sbjct: 241 P----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFA-RVLKKGEKL 102
+ P RY +RQ+ +++H + V+HRDLK N+ L++ + VK+ DFG A +V GE+
Sbjct: 137 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 196
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
LCGTP Y+APEVL G+ VDVW+ G IMYTLLVG PPF
Sbjct: 197 KVLCGTPNYIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 250
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRAN 190
I + +YS N ++ L ++L+ +
Sbjct: 251 IKKNEYSIPK-HINPVAASLIQKMLQTD 277
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
Y+APEVL G+ VDVW+ G IMYTLLVG PPF I + +YS
Sbjct: 204 NYIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 257
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
I+ LI+K+L P R ++ E LN FF
Sbjct: 258 IP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFA-RVLKKGEKL 102
+ P RY +RQ+ +++H + V+HRDLK N+ L++ + VK+ DFG A +V GE+
Sbjct: 113 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 172
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
LCGTP Y+APEVL G+ VDVW+ G IMYTLLVG PPF
Sbjct: 173 KVLCGTPNYIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL G+ VDVW+ G IMYTLLVG PPF I + +YS
Sbjct: 181 YIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 234
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
I+ LI+K+L P R ++ E LN FF
Sbjct: 235 P----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFA-RVLKKGEKL 102
+ P RY +RQ+ +++H + V+HRDLK N+ L++ + VK+ DFG A +V GE+
Sbjct: 139 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
LCGTP Y+APEVL G+ VDVW+ G IMYTLLVG PPF
Sbjct: 199 KVLCGTPNYIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 252
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRAN 190
I + +YS N ++ L ++L+ +
Sbjct: 253 IKKNEYSIPK-HINPVAASLIQKMLQTD 279
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEVL G+ VDVW+ G IMYTLLVG PPF I + +YS
Sbjct: 207 YIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 260
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
I+ LI+K+L P R ++ E LN FF
Sbjct: 261 P----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 18/176 (10%)
Query: 11 RVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHR 70
R + + E D L +++ D+G+ A + S I + + EA++++H+ ++ HR
Sbjct: 131 RKCLLIVXECLDGGELFSRIQDRGDQAFTEREASE-----IXKSIGEAIQYLHSINIAHR 185
Query: 71 DLKPENILLDDQMN---VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATG 127
D+KPEN+L + +KLTDFGFA+ L C TP Y+APEVL
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL------GPEK 239
Query: 128 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML----RNIMEGKYSFSSPEWNDIS 179
Y ++ D W+ GVI Y LL G PPF+ + + I G+Y F +PEW+++S
Sbjct: 240 YDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVS 295
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML----RNIMEG 236
Y+APEVL Y ++ D W+ GVI Y LL G PPF+ + + I G
Sbjct: 229 YVAPEVL------GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXG 282
Query: 237 KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+Y F +PEW+++SE+ K LIR LL P R ++ E NH +
Sbjct: 283 QYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 8/144 (5%)
Query: 45 NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMD 104
NP ++ ++ ALE++H+ +++RDLKPENILLD ++K+TDFGFA+ + +
Sbjct: 105 NPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP--DVTYX 162
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
LCGTP Y+APEV+ Y +++D W+ G+++Y +L G PF+ M I+
Sbjct: 163 LCGTPDYIAPEVVSTK------PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 216
Query: 165 EGKYSFSSPEWNDISGYLAPEVLR 188
+ F D+ L+ + R
Sbjct: 217 NAELRFPPFFNEDVKDLLSRLITR 240
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEV+ Y +++D W+ G+++Y +L G PF+ M I+ + F
Sbjct: 169 YIAPEVVSTK------PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF 222
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFH----PKLFDQDIE 289
P +N ED KDL+ +L+ R ++ NH +F KL ++IE
Sbjct: 223 -PPFFN---EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIE 276
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 69/120 (57%), Gaps = 7/120 (5%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMD 104
P R+ ++ AL ++H+ ++V+RDLKPENILLD Q ++ LTDFG + ++
Sbjct: 139 PRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST 198
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
CGTP YLAPEVL Y + VD W G ++Y +L G PPF+ R M NI+
Sbjct: 199 FCGTPEYLAPEVLHKQ------PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL Y + VD W G ++Y +L G PPF+ R M NI+
Sbjct: 205 YLAPEVLHKQ------PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL 258
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVK----EALNHSFF 279
+I+ + L+ LL R K E +H FF
Sbjct: 259 KP----NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFF 297
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 86/144 (59%), Gaps = 10/144 (6%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-VLK 97
++++ + +++ + +L AL+H+H+ +++RDLKPENILLD++ ++KLTDFG ++ +
Sbjct: 120 KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 179
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HR 154
+K CGT Y+APEV+ + G+ Q+ D W+ GV+M+ +L G PF +
Sbjct: 180 HEKKAYSFCGTVEYMAPEVV------NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK 233
Query: 155 KQMVMLRNIMEGKYSFSSPEWNDI 178
+ M M+ G F SPE +
Sbjct: 234 ETMTMILKAKLGMPQFLSPEAQSL 257
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 25/122 (20%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIMEGK 237
Y+APEV+ + G+ Q+ D W+ GV+M+ +L G PF ++ M M+ G
Sbjct: 193 YMAPEVV------NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 246
Query: 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHP----KLFDQDI 288
F SPE + L+R L P +R V+E HSFF KL+ ++I
Sbjct: 247 PQFLSPE-------AQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREI 299
Query: 289 EP 290
P
Sbjct: 300 HP 301
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 86/144 (59%), Gaps = 10/144 (6%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-VLK 97
++++ + +++ + +L AL+H+H+ +++RDLKPENILLD++ ++KLTDFG ++ +
Sbjct: 119 KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HR 154
+K CGT Y+APEV+ + G+ Q+ D W+ GV+M+ +L G PF +
Sbjct: 179 HEKKAYSFCGTVEYMAPEVV------NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK 232
Query: 155 KQMVMLRNIMEGKYSFSSPEWNDI 178
+ M M+ G F SPE +
Sbjct: 233 ETMTMILKAKLGMPQFLSPEAQSL 256
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 25/122 (20%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIMEGK 237
Y+APEV+ + G+ Q+ D W+ GV+M+ +L G PF ++ M M+ G
Sbjct: 192 YMAPEVV------NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 245
Query: 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHP----KLFDQDI 288
F SPE + L+R L P +R V+E HSFF KL+ ++I
Sbjct: 246 PQFLSPE-------AQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREI 298
Query: 289 EP 290
P
Sbjct: 299 HP 300
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 86/144 (59%), Gaps = 10/144 (6%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-VLK 97
++++ + +++ + +L AL+H+H+ +++RDLKPENILLD++ ++KLTDFG ++ +
Sbjct: 119 KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HR 154
+K CGT Y+APEV+ + G+ Q+ D W+ GV+M+ +L G PF +
Sbjct: 179 HEKKAYSFCGTVEYMAPEVV------NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK 232
Query: 155 KQMVMLRNIMEGKYSFSSPEWNDI 178
+ M M+ G F SPE +
Sbjct: 233 ETMTMILKAKLGMPQFLSPEAQSL 256
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 25/122 (20%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIMEGK 237
Y+APEV+ + G+ Q+ D W+ GV+M+ +L G PF ++ M M+ G
Sbjct: 192 YMAPEVV------NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 245
Query: 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHP----KLFDQDI 288
F SPE + L+R L P +R V+E HSFF KL+ ++I
Sbjct: 246 PQFLSPE-------AQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREI 298
Query: 289 EP 290
P
Sbjct: 299 HP 300
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK-KGEKLMDLCG 107
R+ M Q+ + ++H+H ++HRDL N+LL MN+K+ DFG A LK EK LCG
Sbjct: 115 RHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCG 174
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP Y++PE+ + +G DVW+ G + YTLL+G PPF L ++
Sbjct: 175 TPNYISPEI------ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD 228
Query: 168 Y---SFSSPEWNDISGYLAPEVLRAN 190
Y SF S E D L ++LR N
Sbjct: 229 YEMPSFLSIEAKD----LIHQLLRRN 250
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
Y++PE+ + +G DVW+ G + YTLL+G PPF L ++ Y
Sbjct: 177 NYISPEI------ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE 230
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
P + +S + KDLI +LL P DR S+ L+H F
Sbjct: 231 M--PSF--LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 33/196 (16%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLD--DQMN-VKLTDFGFARVLK--------KG 99
+++ + AL+ +HN + HRDLKPENIL + +Q++ VK+ DFG +K
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIST 175
Query: 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF-------- 151
+L+ CG+ Y+APEV+ A E+A+ Y + D+W+ GVI+Y LL G PPF
Sbjct: 176 PELLTPCGSAEYMAPEVVEA-FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
Query: 152 -WHRK------QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDV 204
W R Q ++ +I EGKY F +W IS A +++ + DA A
Sbjct: 235 GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHIS-CAAKDLISKLLVRDAKQRLSAAQ- 292
Query: 205 WACGVIMYTLLVGCPP 220
V+ + + GC P
Sbjct: 293 ----VLQHPWVQGCAP 304
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 19/180 (10%)
Query: 13 VVRVKEEGDDLKH--LAAQVVDKGE---AAVQDIINSNPALRYIMRQLFEALEHVHNHSV 67
++ +K+ DD KH L +++ GE ++ S +++ + + +E++H+ V
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 68 VHRDLKPENILLDDQMN----VKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMF 122
VHRDLKP NIL D+ +++ DFGFA+ L+ + LM C T ++APEVL+
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ-- 200
Query: 123 EDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV---MLRNIMEGKYSFSSPEWNDIS 179
GY + D+W+ G+++YT+L G PF + +L I GK++ S WN +S
Sbjct: 201 ----GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS 256
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 179 SGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV---MLRNIME 235
+ ++APEVL+ GY + D+W+ G+++YT+L G PF + +L I
Sbjct: 189 ANFVAPEVLKRQ------GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS 242
Query: 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK-------LFDQDI 288
GK++ S WN +SE KDL+ K+L V P R + K+ L H + K L QD+
Sbjct: 243 GKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDL 302
Query: 289 EPIK 292
+ +K
Sbjct: 303 QLVK 306
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 19/180 (10%)
Query: 13 VVRVKEEGDDLKH--LAAQVVDKGE---AAVQDIINSNPALRYIMRQLFEALEHVHNHSV 67
++ +K+ DD KH L +++ GE ++ S +++ + + +E++H+ V
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 68 VHRDLKPENILLDDQMN----VKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMF 122
VHRDLKP NIL D+ +++ DFGFA+ L+ + LM C T ++APEVL+
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ-- 200
Query: 123 EDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV---MLRNIMEGKYSFSSPEWNDIS 179
GY + D+W+ G+++YT+L G PF + +L I GK++ S WN +S
Sbjct: 201 ----GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS 256
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 179 SGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV---MLRNIME 235
+ ++APEVL+ GY + D+W+ G+++YT+L G PF + +L I
Sbjct: 189 ANFVAPEVLKRQ------GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS 242
Query: 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK-------LFDQDI 288
GK++ S WN +SE KDL+ K+L V P R + K+ L H + K L QD+
Sbjct: 243 GKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDL 302
Query: 289 EPIKKDYKTASRKLSKINQLTEFQFIILVVRAAVRISRL 327
+ +K L+ + + I + A R+ +L
Sbjct: 303 QLVKGAMAATYSALNSSKPTPQLKPIESSILAQRRVRKL 341
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 195 VGTAQYVSPELLTEK------SASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ ALE++H+ VV+RD+K EN++LD ++K+TDFG + + G + CG
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ +
Sbjct: 168 TPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 168 YSFS---SPE 174
F SPE
Sbjct: 222 IRFPRTLSPE 231
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 171 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
+S + K L+ LL P+ R KE + H FF
Sbjct: 225 P----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ ALE++H+ VV+RD+K EN++LD ++K+TDFG + + G + CG
Sbjct: 113 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 172
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ +
Sbjct: 173 TPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 226
Query: 168 YSFS---SPE 174
F SPE
Sbjct: 227 IRFPRTLSPE 236
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 176 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFF 279
+S + K L+ LL P+ R KE + H FF
Sbjct: 230 P----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 269
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ ALE++H+ VV+RD+K EN++LD ++K+TDFG + + G + CG
Sbjct: 111 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 170
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ +
Sbjct: 171 TPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 224
Query: 168 YSFS---SPE 174
F SPE
Sbjct: 225 IRFPRTLSPE 234
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 174 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 227
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFF 279
+S + K L+ LL P+ R KE + H FF
Sbjct: 228 P----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ ALE++H+ VV+RD+K EN++LD ++K+TDFG + + G + CG
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 167
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ +
Sbjct: 168 TPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 168 YSFS---SPE 174
F SPE
Sbjct: 222 IRFPRTLSPE 231
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 171 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFF 279
+S + K L+ LL P+ R KE + H FF
Sbjct: 225 P----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ ALE++H+ VV+RD+K EN++LD ++K+TDFG + + G + CG
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ +
Sbjct: 168 TPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 168 YSFS---SPE 174
F SPE
Sbjct: 222 IRFPRTLSPE 231
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 171 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFF 279
+S + K L+ LL P+ R KE + H FF
Sbjct: 225 P----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ ALE++H+ VV+RD+K EN++LD ++K+TDFG + + G + CG
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 167
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ +
Sbjct: 168 TPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 168 YSFS---SPE 174
F SPE
Sbjct: 222 IRFPRTLSPE 231
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 171 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFF 279
+S + K L+ LL P+ R KE + H FF
Sbjct: 225 P----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ ALE++H+ VV+RD+K EN++LD ++K+TDFG + + G + CG
Sbjct: 108 RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ +
Sbjct: 168 TPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 168 YSFS---SPE 174
F SPE
Sbjct: 222 IRFPRTLSPE 231
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 171 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFF 279
+S + K L+ LL P+ R KE + H FF
Sbjct: 225 P----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 138 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 198 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 251
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F + P+ D + L + + E+ GYG
Sbjct: 252 LEYDFPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYG 289
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 196 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 249
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 250 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 287
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 132 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 192 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 245
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 246 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 283
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 110 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 170 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 223
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 224 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 261
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 112 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 172 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 225
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 226 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 263
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 111 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 171 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 224
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 225 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 262
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 113 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 173 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 226
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 227 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 264
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 195 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 193 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 246
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 193 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 246
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 195 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 193 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 246
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 18/156 (11%)
Query: 19 EGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHN-----HSVVHRDLK 73
EG DL A V+ KG Q ++ LR +M QL AL+ H H+V+HRDLK
Sbjct: 90 EGGDL----ASVITKGTKERQ-YLDEEFVLR-VMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 74 PENILLDDQMNVKLTDFGFARVLKKGEKLM-DLCGTPGYLAPEVLRANMFEDATGYGQAV 132
P N+ LD + NVKL DFG AR+L E + GTP Y++PE + + Y +
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM------NRMSYNEKS 197
Query: 133 DVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
D+W+ G ++Y L PPF Q + I EGK+
Sbjct: 198 DIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF 233
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y++PE + + Y + D+W+ G ++Y L PPF Q + I EGK+
Sbjct: 182 YMSPEQM------NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
++D + ++I ++L + R SV+E L +
Sbjct: 236 IPYRYSD---ELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 193 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 246
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 284
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 117 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 177 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 230
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 231 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 268
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 195 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 196 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 249
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 250 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 287
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 132 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 192 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 245
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 246 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 283
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 140 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 199
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ + I++
Sbjct: 200 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 253
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 254 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 291
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENIL-LDDQMN--VKLTDFGFARVLKKGEKLMDLCG 107
IM+ + A+ + H +V HRDLKPEN L L D + +KL DFG A K G+ + G
Sbjct: 111 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVG 170
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP Y++P+VL YG D W+ GV+MY LL G PPF ++ I EG
Sbjct: 171 TPYYVSPQVLEGL-------YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGT 223
Query: 168 YSFSSPEWNDIS 179
++F +W ++S
Sbjct: 224 FTFPEKDWLNVS 235
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y++P+VL YG D W+ GV+MY LL G PPF ++ I EG ++F
Sbjct: 174 YVSPQVLEGL-------YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTF 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+W ++S + LIR+LL +P+ R + +AL H +F +L
Sbjct: 227 PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL 269
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENIL-LDDQMN--VKLTDFGFARVLKKGEKLMDLCG 107
IM+ + A+ + H +V HRDLKPEN L L D + +KL DFG A K G+ + G
Sbjct: 128 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVG 187
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP Y++P+VL YG D W+ GV+MY LL G PPF ++ I EG
Sbjct: 188 TPYYVSPQVLEGL-------YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGT 240
Query: 168 YSFSSPEWNDIS 179
++F +W ++S
Sbjct: 241 FTFPEKDWLNVS 252
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y++P+VL YG D W+ GV+MY LL G PPF ++ I EG ++F
Sbjct: 191 YVSPQVLEGL-------YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTF 243
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+W ++S + LIR+LL +P+ R + +AL H +F +L
Sbjct: 244 PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL 286
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK--KGEK 101
S R + RQ+ A+ +VH+ HRDLKPEN+L D+ +KL DFG K K
Sbjct: 106 SEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165
Query: 102 LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLR 161
L CG+ Y APE+++ + G DVW+ G+++Y L+ G PF M + +
Sbjct: 166 LQTCCGSLAYAAPELIQGKSY-----LGSEADVWSMGILLYVLMCGFLPFDDDNVMALYK 220
Query: 162 NIMEGKYSFSSPEWNDISGYL 182
IM GKY P+W S L
Sbjct: 221 KIMRGKYDV--PKWLSPSSIL 239
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
Y APE+++ + G DVW+ G+++Y L+ G PF M + + IM GKY
Sbjct: 174 AYAAPELIQGKSY-----LGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYD 228
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
P+W +S L++++L V P+ R S+K LNH +
Sbjct: 229 V--PKW--LSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ I++
Sbjct: 195 VGTAQYVSPELLTEK------SAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK 248
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 33/196 (16%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLD--DQMN-VKLTDFGFARVLK--------KG 99
+++ + AL+ +HN + HRDLKPENIL + +Q++ VK+ DF +K
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175
Query: 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF-------- 151
+L+ CG+ Y+APEV+ A E+A+ Y + D+W+ GVI+Y LL G PPF
Sbjct: 176 PELLTPCGSAEYMAPEVVEA-FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
Query: 152 -WHRK------QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDV 204
W R Q ++ +I EGKY F +W IS A +++ + DA A
Sbjct: 235 GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHIS-CAAKDLISKLLVRDAKQRLSAAQ- 292
Query: 205 WACGVIMYTLLVGCPP 220
V+ + + GC P
Sbjct: 293 ----VLQHPWVQGCAP 304
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL--DDQMNVKLTDFGFAR--- 94
D + + IMRQ+F AL ++HN + HRD+KPEN L + +KL DFG ++
Sbjct: 162 DFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFY 221
Query: 95 VLKKGE--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152
L GE + GTP ++APEVL YG D W+ GV+++ LL+G PF
Sbjct: 222 KLNNGEYYGMTTKAGTPYFVAPEVLNTT----NESYGPKCDAWSAGVLLHLLLMGAVPFP 277
Query: 153 HRKQMVMLRNIMEGKYSFSSPEWNDIS 179
+ ++ K F +P +N +S
Sbjct: 278 GVNDADTISQVLNKKLCFENPNYNVLS 304
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 13/158 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDL 105
R+ ++ ALE++H ++HRDLKPENILL++ M++++TDFG A+VL K +
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GT Y++PE+L ++ D+WA G I+Y L+ G PPF + ++ I++
Sbjct: 195 VGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK 248
Query: 166 GKYSFSS---PEWND-ISGYLAPEVLRANMFEDATGYG 199
+Y F P+ D + L + + E+ GYG
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYG 286
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILL--DDQMNVKLTDFGFARVLKKGEKLMDLCGT 108
M+Q+ E + H+H ++H DLKPENIL D +K+ DFG AR K EKL GT
Sbjct: 192 FMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGT 251
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
P +LAPEV+ + T D+W+ GVI Y LL G PF L NI+ ++
Sbjct: 252 PEFLAPEVVNYDFVSFPT------DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW 305
Query: 169 SFSSPEWNDIS 179
E+ DIS
Sbjct: 306 DLEDEEFQDIS 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 226
K +F +PE +LAPEV+ + T D+W+ GVI Y LL G PF
Sbjct: 246 KVNFGTPE------FLAPEVVNYDFVSFPT------DMWSVGVIAYMLLSGLSPFLGDND 293
Query: 227 MVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
L NI+ ++ E+ DISE+ K+ I KLLI R S EAL H
Sbjct: 294 AETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 42 INSNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKG 99
+ S R+ ++ AL+++H+ +VV+RDLK EN++LD ++K+TDFG + +K G
Sbjct: 247 VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 306
Query: 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
+ CGTP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ +
Sbjct: 307 ATMKTFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 360
Query: 160 LRNIM 164
I+
Sbjct: 361 FELIL 365
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 318 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 371
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFF 279
+ + K L+ LL P+ R KE + H FF
Sbjct: 372 P----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 14/137 (10%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLK-KGEKLMDL 105
++ + + +E++H VVHRDLKP NIL D+ ++++ DFGFA+ L+ + LM
Sbjct: 121 VLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP 180
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV---MLRN 162
C T ++APEVL + GY A D+W+ GV++YT+L G PF + +L
Sbjct: 181 CYTANFVAPEVL------ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILAR 234
Query: 163 IMEGKYSFSSPEWNDIS 179
I GK+S S WN +S
Sbjct: 235 IGSGKFSLSGGYWNSVS 251
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 179 SGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV---MLRNIME 235
+ ++APEVL + GY A D+W+ GV++YT+L G PF + +L I
Sbjct: 184 ANFVAPEVL------ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS 237
Query: 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
GK+S S WN +S+ KDL+ K+L V P R + L H
Sbjct: 238 GKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 42 INSNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKG 99
+ S R+ ++ AL+++H+ +VV+RDLK EN++LD ++K+TDFG + +K G
Sbjct: 244 VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303
Query: 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
+ CGTP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ +
Sbjct: 304 ATMKTFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 357
Query: 160 LRNIM 164
I+
Sbjct: 358 FELIL 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 315 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 368
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFF 279
+ + K L+ LL P+ R KE + H FF
Sbjct: 369 P----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 42 INSNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKG 99
+ S R+ ++ AL+++H+ +VV+RDLK EN++LD ++K+TDFG + +K G
Sbjct: 105 VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 164
Query: 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
+ CGTP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ +
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 218
Query: 160 LRNIM 164
I+
Sbjct: 219 FELIL 223
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 176 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFF 279
+ + K L+ LL P+ R KE + H FF
Sbjct: 230 P----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 42 INSNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKG 99
+ S R+ ++ AL+++H+ +VV+RDLK EN++LD ++K+TDFG + +K G
Sbjct: 104 VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 163
Query: 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
+ CGTP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ +
Sbjct: 164 ATMKXFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 217
Query: 160 LRNIM 164
I+
Sbjct: 218 FELIL 222
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 175 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFF 279
+ + K L+ LL P+ R KE + H FF
Sbjct: 229 P----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 75/125 (60%), Gaps = 8/125 (6%)
Query: 42 INSNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKG 99
+ S R+ ++ AL+++H+ +VV+RDLK EN++LD ++K+TDFG + +K G
Sbjct: 106 VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 165
Query: 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
+ CGTP YLAPEVL N YG+AVD W GV+MY ++ G PF+++ +
Sbjct: 166 ATMKXFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 219
Query: 160 LRNIM 164
I+
Sbjct: 220 FELIL 224
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPEVL N YG+AVD W GV+MY ++ G PF+++ + I+ + F
Sbjct: 177 YLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS-----VKEALNHSFF 279
+ + K L+ LL P+ R KE + H FF
Sbjct: 231 P----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 20/219 (9%)
Query: 50 YIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-VLKKGEKLMDLCGT 108
+ + ++ AL H+H +++RDLKPENI+L+ Q +VKLTDFG + + G CGT
Sbjct: 125 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGT 184
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
Y+APE+L +G+ +AVD W+ G +MY +L G PPF + + I++ K
Sbjct: 185 IEYMAPEILM------RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL 238
Query: 169 SFSSPEWNDISGYLAPEVLRANMFED-ATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ P + L ++L+ N G G A +V A P F H
Sbjct: 239 NL-PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA-----------HPFFRHINWE 286
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPED 266
+L +E + D+S+ R+ + +P+D
Sbjct: 287 ELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDD 325
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 79/156 (50%), Gaps = 18/156 (11%)
Query: 19 EGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHN-----HSVVHRDLK 73
EG DL A V+ KG Q ++ LR +M QL AL+ H H+V+HRDLK
Sbjct: 90 EGGDL----ASVITKGTKERQ-YLDEEFVLR-VMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 74 PENILLDDQMNVKLTDFGFARVLKKGEKLM-DLCGTPGYLAPEVLRANMFEDATGYGQAV 132
P N+ LD + NVKL DFG AR+L GTP Y++PE + + Y +
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM------NRMSYNEKS 197
Query: 133 DVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
D+W+ G ++Y L PPF Q + I EGK+
Sbjct: 198 DIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF 233
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y++PE + + Y + D+W+ G ++Y L PPF Q + I EGK+
Sbjct: 182 YMSPEQM------NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
++D + ++I ++L + R SV+E L +
Sbjct: 236 IPYRYSD---ELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 79/156 (50%), Gaps = 18/156 (11%)
Query: 19 EGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHN-----HSVVHRDLK 73
EG DL A V+ KG Q ++ LR +M QL AL+ H H+V+HRDLK
Sbjct: 90 EGGDL----ASVITKGTKERQ-YLDEEFVLR-VMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 74 PENILLDDQMNVKLTDFGFARVLKKGEKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAV 132
P N+ LD + NVKL DFG AR+L GTP Y++PE + + Y +
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM------NRMSYNEKS 197
Query: 133 DVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
D+W+ G ++Y L PPF Q + I EGK+
Sbjct: 198 DIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF 233
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y++PE + + Y + D+W+ G ++Y L PPF Q + I EGK+
Sbjct: 182 YMSPEQM------NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
++D + ++I ++L + R SV+E L +
Sbjct: 236 IPYRYSD---ELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 20/219 (9%)
Query: 50 YIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-VLKKGEKLMDLCGT 108
+ + ++ AL H+H +++RDLKPENI+L+ Q +VKLTDFG + + G CGT
Sbjct: 125 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGT 184
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY 168
Y+APE+L +G+ +AVD W+ G +MY +L G PPF + + I++ K
Sbjct: 185 IEYMAPEILM------RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL 238
Query: 169 SFSSPEWNDISGYLAPEVLRANMFED-ATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ P + L ++L+ N G G A +V A P F H
Sbjct: 239 NL-PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA-----------HPFFRHINWE 286
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPED 266
+L +E + D+S+ R+ + +P+D
Sbjct: 287 ELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDD 325
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 6/96 (6%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR--VLKKGEKLMDLCGTPGYLAPE 115
ALEH+H +++RD+K ENILLD +V LTDFG ++ V + E+ D CGT Y+AP+
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 116 VLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
++R +G+ +AVD W+ GV+MY LL G PF
Sbjct: 231 IVRGG----DSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 53/269 (19%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S+ +++++ QL L+++H+ ++HRDLKP N+ +++ +++ DFG AR + E++
Sbjct: 129 SDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMT 186
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I
Sbjct: 187 GYVATRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
ME + G +PEVL E A Y Q++ PP
Sbjct: 242 ME------------VVGTPSPEVLAKISSEHARTYIQSL----------------PPMPQ 273
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF---H 280
+ L +I G + DL+ ++L++ + R S EAL H++F H
Sbjct: 274 KD----LSSIFRGANPLAI-----------DLLGRMLVLDSDQRVSAAEALAHAYFSQYH 318
Query: 281 PKLFDQDIEPIKKDYKTASRKLSKINQLT 309
+ + EP + + R L + +LT
Sbjct: 319 DPEDEPEAEPYDESVEAKERTLEEWKELT 347
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 53/269 (19%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S+ +++++ QL L+++H+ ++HRDLKP N+ +++ +++ DFG AR + E++
Sbjct: 129 SDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMT 186
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I
Sbjct: 187 GYVATRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
ME + G +PEVL E A Y Q++ PP
Sbjct: 242 ME------------VVGTPSPEVLAKISSEHARTYIQSL----------------PPMPQ 273
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF---H 280
+ L +I G + DL+ ++L++ + R S EAL H++F H
Sbjct: 274 KD----LSSIFRGANPLAI-----------DLLGRMLVLDSDQRVSAAEALAHAYFSQYH 318
Query: 281 PKLFDQDIEPIKKDYKTASRKLSKINQLT 309
+ + EP + + R L + +LT
Sbjct: 319 DPEDEPEAEPYDESVEAKERTLEEWKELT 347
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 76/137 (55%), Gaps = 14/137 (10%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDL- 105
++ + + +E++H VVHRDLKP NIL D+ ++++ DFGFA+ L+ L+
Sbjct: 121 VLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP 180
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV---MLRN 162
C T ++APEVL + GY A D+W+ GV++YT L G PF + +L
Sbjct: 181 CYTANFVAPEVL------ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILAR 234
Query: 163 IMEGKYSFSSPEWNDIS 179
I GK+S S WN +S
Sbjct: 235 IGSGKFSLSGGYWNSVS 251
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 179 SGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV---MLRNIME 235
+ ++APEVL + GY A D+W+ GV++YT L G PF + +L I
Sbjct: 184 ANFVAPEVL------ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGS 237
Query: 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
GK+S S WN +S+ KDL+ K L V P R + L H +
Sbjct: 238 GKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 53/269 (19%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S+ +++++ QL L+++H+ ++HRDLKP N+ +++ +++ DFG AR + E++
Sbjct: 121 SDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMT 178
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I
Sbjct: 179 GYVATRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 233
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
ME + G +PEVL E A Y Q++ PP
Sbjct: 234 ME------------VVGTPSPEVLAKISSEHARTYIQSL----------------PPMPQ 265
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF---H 280
+ L +I G + DL+ ++L++ + R S EAL H++F H
Sbjct: 266 KD----LSSIFRGANPLAI-----------DLLGRMLVLDSDQRVSAAEALAHAYFSQYH 310
Query: 281 PKLFDQDIEPIKKDYKTASRKLSKINQLT 309
+ + EP + + R L + +LT
Sbjct: 311 DPEDEPEAEPYDESVEAKERTLEEWKELT 339
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 10/136 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC-- 106
R+ ++ AL+ +H+ +HRD+KP+N+LLD ++KL DFG +K ++ M C
Sbjct: 171 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDT 228
Query: 107 --GTPGYLAPEVLRANMFEDATG-YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
GTP Y++PEVL++ + G YG+ D W+ GV +Y +LVG PF+ + I
Sbjct: 229 AVGTPDYISPEVLKS---QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 285
Query: 164 MEGKYSFSSPEWNDIS 179
M K S + P+ NDIS
Sbjct: 286 MNHKNSLTFPDDNDIS 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 30/180 (16%)
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
+D + G++ +V NM D +G+ + D C + +V C
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT------------ 228
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGY-GQAVDVWACGVIMYTLLVGCPPF 221
+ +P+ Y++PEVL++ + GY G+ D W+ GV +Y +LVG PF
Sbjct: 229 ------AVGTPD------YISPEVLKS---QGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
Query: 222 WHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLI--VTPEDRYSVKEALNHSFF 279
+ + IM K S + P+ NDIS++ K+LI L R V+E H FF
Sbjct: 274 YADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 333
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 10/136 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC-- 106
R+ ++ AL+ +H+ +HRD+KP+N+LLD ++KL DFG +K ++ M C
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDT 233
Query: 107 --GTPGYLAPEVLRANMFEDATG-YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
GTP Y++PEVL++ + G YG+ D W+ GV +Y +LVG PF+ + I
Sbjct: 234 AVGTPDYISPEVLKS---QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
Query: 164 MEGKYSFSSPEWNDIS 179
M K S + P+ NDIS
Sbjct: 291 MNHKNSLTFPDDNDIS 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 30/180 (16%)
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
+D + G++ +V NM D +G+ + D C + +V C
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT------------ 233
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGY-GQAVDVWACGVIMYTLLVGCPPF 221
+ +P+ Y++PEVL++ + GY G+ D W+ GV +Y +LVG PF
Sbjct: 234 ------AVGTPD------YISPEVLKS---QGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
Query: 222 WHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLI--VTPEDRYSVKEALNHSFF 279
+ + IM K S + P+ NDIS++ K+LI L R V+E H FF
Sbjct: 279 YADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 338
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 79/136 (58%), Gaps = 10/136 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC-- 106
R+ ++ AL+ +H+ +HRD+KP+N+LLD ++KL DFG +K ++ M C
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDT 233
Query: 107 --GTPGYLAPEVLRANMFEDATG-YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
GTP Y++PEVL++ + G YG+ D W+ GV +Y +LVG PF+ + I
Sbjct: 234 AVGTPDYISPEVLKS---QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
Query: 164 MEGKYSFSSPEWNDIS 179
M K S + P+ NDIS
Sbjct: 291 MNHKNSLTFPDDNDIS 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 30/180 (16%)
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
+D + G++ +V NM D +G+ + D C + +V C
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT------------ 233
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGY-GQAVDVWACGVIMYTLLVGCPPF 221
+ +P+ Y++PEVL++ + GY G+ D W+ GV +Y +LVG PF
Sbjct: 234 ------AVGTPD------YISPEVLKS---QGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
Query: 222 WHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLI--VTPEDRYSVKEALNHSFF 279
+ + IM K S + P+ NDIS++ K+LI L R V+E H FF
Sbjct: 279 YADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 338
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 80/130 (61%), Gaps = 7/130 (5%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-VLK 97
++++ + +++ + +L L+H+H+ +++RDLKPENILLD++ ++KLTDFG ++ +
Sbjct: 123 KEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID 182
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+K CGT Y+APEV+ + G+ + D W+ GV+M+ +L G PF + +
Sbjct: 183 HEKKAYSFCGTVEYMAPEVV------NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRK 236
Query: 158 VMLRNIMEGK 167
+ I++ K
Sbjct: 237 ETMTLILKAK 246
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEV+ + G+ + D W+ GV+M+ +L G PF + + + I++ K
Sbjct: 196 YMAPEVV------NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK--L 247
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFFHP----KLFDQDIEP 290
P++ +S + + L+R L P +R +E H F+ KL+ ++I+P
Sbjct: 248 GMPQF--LSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKP 304
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 42 INSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN--VKLTDFGFARVLKKG 99
+N + Y+ Q+ EAL+ +H+H++ H D++PENI+ + + +K+ +FG AR LK G
Sbjct: 99 LNEREIVSYV-HQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157
Query: 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
+ L P Y APEV + ++ AT D+W+ G ++Y LL G PF +
Sbjct: 158 DNFRLLFTAPEYYAPEVHQHDVVSTAT------DMWSLGTLVYVLLSGINPFLAETNQQI 211
Query: 160 LRNIMEGKYSFSSPEWNDIS 179
+ NIM +Y+F + +IS
Sbjct: 212 IENIMNAEYTFDEEAFKEIS 231
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 170 FSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 229
F++PE Y APEV + ++ AT D+W+ G ++Y LL G PF +
Sbjct: 164 FTAPE------YYAPEVHQHDVVSTAT------DMWSLGTLVYVLLSGINPFLAETNQQI 211
Query: 230 LRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+ NIM +Y+F + +IS + D + +LL+ + R + EAL H + K+
Sbjct: 212 IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ AL ++H +++RDLK +N+LLD + ++KLTD+G + L+ G+ CG
Sbjct: 156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 215
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
TP Y+APE+LR ED YG +VD WA GV+M+ ++ G PF
Sbjct: 216 TPNYIAPEILRG---ED---YGFSVDWWALGVLMFEMMAGRSPF 253
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 6/41 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 221
Y+APE+LR ED YG +VD WA GV+M+ ++ G PF
Sbjct: 219 YIAPEILRG---ED---YGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 9 HSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVV 68
H+ +V EG +L +G+A + + +M+Q+ AL + H+ VV
Sbjct: 93 HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAE------LMKQMMNALAYFHSQHVV 146
Query: 69 HRDLKPENILLDD---QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDA 125
H+DLKPENIL D +K+ DFG A + K E + GT Y+APEV + D
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK----RDV 202
Query: 126 TGYGQAVDVWACGVIMYTLLVGCPPF 151
T D+W+ GV+MY LL GC PF
Sbjct: 203 TF---KCDIWSAGVVMYFLLTGCLPF 225
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 16/103 (15%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APEV + D T D+W+ GV+MY LL GC PF L + + K ++
Sbjct: 192 YMAPEVFK----RDVTF---KCDIWSAGVVMYFLLTGCLPFTGTS----LEEVQQ-KATY 239
Query: 241 SSP----EWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
P E ++ DL++++L PE R S + L+H +F
Sbjct: 240 KEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ AL ++H +++RDLK +N+LLD + ++KLTD+G + L+ G+ CG
Sbjct: 124 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 183
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
TP Y+APE+LR ED YG +VD WA GV+M+ ++ G PF
Sbjct: 184 TPNYIAPEILRG---ED---YGFSVDWWALGVLMFEMMAGRSPF 221
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 6/41 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 221
Y+APE+LR ED YG +VD WA GV+M+ ++ G PF
Sbjct: 187 YIAPEILRG---ED---YGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 9 HSRVVVRVK---EEGDDLKHLAAQVVDKGEAA--VQDIINSNPALR-----YIMRQLFEA 58
HSR +V + E DL L +++ G+ + ++ NP + + Q+
Sbjct: 243 HSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 59 LEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVL 117
LEH+H ++++RDLKPEN+LLDD NV+++D G A LK G+ K GTPG++APE+L
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 118 RANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
Y +VD +A GV +Y ++ PF R + V
Sbjct: 362 LGEE------YDFSVDYFALGVTLYEMIAARGPFRARGEKV 396
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
G++APE+L Y +VD +A GV +Y ++ PF R + V + + +
Sbjct: 354 GFMAPELLLGEE------YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
+ + S KD LL PE R ++
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ AL ++H +++RDLK +N+LLD + ++KLTD+G + L+ G+ CG
Sbjct: 109 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 168
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
TP Y+APE+LR ED YG +VD WA GV+M+ ++ G PF
Sbjct: 169 TPNYIAPEILRG---ED---YGFSVDWWALGVLMFEMMAGRSPF 206
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 6/41 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 221
Y+APE+LR ED YG +VD WA GV+M+ ++ G PF
Sbjct: 172 YIAPEILRG---ED---YGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 9 HSRVVVRVK---EEGDDLKHLAAQVVDKGEAA--VQDIINSNPALR-----YIMRQLFEA 58
HSR +V + E DL L +++ G+ + ++ NP + + Q+
Sbjct: 243 HSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 59 LEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVL 117
LEH+H ++++RDLKPEN+LLDD NV+++D G A LK G+ K GTPG++APE+L
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 118 RANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
Y +VD +A GV +Y ++ PF R + V
Sbjct: 362 LGEE------YDFSVDYFALGVTLYEMIAARGPFRARGEKV 396
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
G++APE+L Y +VD +A GV +Y ++ PF R + V + + +
Sbjct: 354 GFMAPELLLGEE------YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
+ + S KD LL PE R ++
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 9 HSRVVVRVK---EEGDDLKHLAAQVVDKGEAA--VQDIINSNPALR-----YIMRQLFEA 58
HSR +V + E DL L +++ G+ + ++ NP + + Q+
Sbjct: 243 HSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 59 LEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVL 117
LEH+H ++++RDLKPEN+LLDD NV+++D G A LK G+ K GTPG++APE+L
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 118 RANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
Y +VD +A GV +Y ++ PF R + V
Sbjct: 362 LGEE------YDFSVDYFALGVTLYEMIAARGPFRARGEKV 396
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
G++APE+L Y +VD +A GV +Y ++ PF R + V + + +
Sbjct: 354 GFMAPELLLGEE------YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
+ + S KD LL PE R ++
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ AL ++H +++RDLK +N+LLD + ++KLTD+G + L+ G+ CG
Sbjct: 113 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 172
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
TP Y+APE+LR ED YG +VD WA GV+M+ ++ G PF
Sbjct: 173 TPNYIAPEILRG---ED---YGFSVDWWALGVLMFEMMAGRSPF 210
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 6/41 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 221
Y+APE+LR ED YG +VD WA GV+M+ ++ G PF
Sbjct: 176 YIAPEILRG---ED---YGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 18/161 (11%)
Query: 9 HSRVVVRVK---EEGDDLKHLAAQVVDKGEAA--VQDIINSNPALR-----YIMRQLFEA 58
HSR +V + E DL L +++ G+ + ++ NP + + Q+
Sbjct: 243 HSRFIVSLAYAFETKTDL-CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 59 LEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEVL 117
LEH+H ++++RDLKPEN+LLDD NV+++D G A LK G+ K GTPG++APE+L
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 118 RANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
Y +VD +A GV +Y ++ PF R + V
Sbjct: 362 LGEE------YDFSVDYFALGVTLYEMIAARGPFRARGEKV 396
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
G++APE+L Y +VD +A GV +Y ++ PF R + V + + +
Sbjct: 354 GFMAPELLLGEE------YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
+ + S KD LL PE R ++
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 99 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 208
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 173 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 228 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 99 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 208
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 173 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 228 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 99 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 208
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 173 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 228 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 16/177 (9%)
Query: 26 LAAQVVDKGEA----AVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
L ++V GE A ++ + + A ++ ++Q+ + + ++H+ + H DLKPENI+L D
Sbjct: 92 LILELVSGGELFDFLAEKESLTEDEATQF-LKQILDGVHYLHSKRIAHFDLKPENIMLLD 150
Query: 82 QM----NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
+ +KL DFG A ++ G + ++ GTP ++APE++ + G D+W+
Sbjct: 151 KNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV------NYEPLGLEADMWSI 204
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFED 194
GVI Y LL G PF + L NI Y F +++ S LA + +R + +D
Sbjct: 205 GVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE-LAKDFIRRLLVKD 260
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 174 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGE 221
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHS 277
+ L NI Y F +++ SE KD IR+LL+ P+ R + ++L HS
Sbjct: 222 TKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHS 274
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 99 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 208
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 173 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 228 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 16/177 (9%)
Query: 26 LAAQVVDKGEA----AVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
L ++V GE A ++ + + A ++ ++Q+ + + ++H+ + H DLKPENI+L D
Sbjct: 85 LILELVSGGELFDFLAEKESLTEDEATQF-LKQILDGVHYLHSKRIAHFDLKPENIMLLD 143
Query: 82 QM----NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
+ +KL DFG A ++ G + ++ GTP ++APE++ + G D+W+
Sbjct: 144 KNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV------NYEPLGLEADMWSI 197
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFED 194
GVI Y LL G PF + L NI Y F +++ S LA + +R + +D
Sbjct: 198 GVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS-ELAKDFIRRLLVKD 253
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 167 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGE 214
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHS 277
+ L NI Y F +++ SE KD IR+LL+ P+ R ++ ++L HS
Sbjct: 215 TKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS 267
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 16/177 (9%)
Query: 26 LAAQVVDKGEA----AVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
L ++V GE A ++ + + A ++ ++Q+ + + ++H+ + H DLKPENI+L D
Sbjct: 106 LILELVSGGELFDFLAEKESLTEDEATQF-LKQILDGVHYLHSKRIAHFDLKPENIMLLD 164
Query: 82 QM----NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
+ +KL DFG A ++ G + ++ GTP ++APE++ + G D+W+
Sbjct: 165 KNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV------NYEPLGLEADMWSI 218
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFED 194
GVI Y LL G PF + L NI Y F +++ S LA + +R + +D
Sbjct: 219 GVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS-ELAKDFIRRLLVKD 274
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 188 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGE 235
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHS 277
+ L NI Y F +++ SE KD IR+LL+ P+ R + ++L HS
Sbjct: 236 TKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHS 288
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 30/168 (17%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN---VKLTDFGFARV 95
Q N A R ++R + AL+ +H + HRDLKPENIL + VK+ DF
Sbjct: 105 QKHFNEREASR-VVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSG 163
Query: 96 LK--------KGEKLMDLCGTPGYLAPEVLRANMFED-ATGYGQAVDVWACGVIMYTLLV 146
+K +L CG+ Y+APEV+ +F D AT Y + D+W+ GV++Y +L
Sbjct: 164 MKLNNSCTPITTPELTTPCGSAEYMAPEVV--EVFTDQATFYDKRCDLWSLGVVLYIMLS 221
Query: 147 GCPPF---------WHRKQMV------MLRNIMEGKYSFSSPEWNDIS 179
G PPF W R ++ + +I EGKY F +W IS
Sbjct: 222 GYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHIS 269
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 97 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 156
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 157 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 206
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 171 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 225
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 226 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 267
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 99 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 208
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 173 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 228 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 99 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 208
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 173 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 228 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 99 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ +CGT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 208
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 173 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 228 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 45 NPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMD 104
P YI RQL A+ ++ ++HRD+K ENI++ + +KL DFG A L++G+
Sbjct: 129 EPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT 188
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
CGT Y APEVL N + G +++W+ GV +YTL+ PF ++ V +
Sbjct: 189 FCGTIEYCAPEVLMGNPYR-----GPELEMWSLGVTLYTLVFEENPFCELEETV--EAAI 241
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFE 193
Y S + +SG L P R E
Sbjct: 242 HPPYLVSKELMSLVSGLLQPVPERRTTLE 270
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC-- 106
++ ++ AL+ +H+ ++HRD+KP+N+LLD ++KL DFG +K E M C
Sbjct: 177 KFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG--TCMKMDETGMVHCDT 234
Query: 107 --GTPGYLAPEVLRANMFEDATG-YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
GTP Y++PEVL++ + G YG+ D W+ GV ++ +LVG PF+ + I
Sbjct: 235 AVGTPDYISPEVLKS---QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI 291
Query: 164 MEGKYSFSSPEWNDIS 179
M+ K S PE +IS
Sbjct: 292 MDHKNSLCFPEDAEIS 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 30/180 (16%)
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
+D + G + +V NM D G+ + D C + T +V C
Sbjct: 187 LDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT------------ 234
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGY-GQAVDVWACGVIMYTLLVGCPPF 221
+ +P+ Y++PEVL++ + GY G+ D W+ GV ++ +LVG PF
Sbjct: 235 ------AVGTPD------YISPEVLKS---QGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
Query: 222 WHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLI--VTPEDRYSVKEALNHSFF 279
+ + IM+ K S PE +IS+ K+LI L R V+E H FF
Sbjct: 280 YADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFF 339
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 7/135 (5%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCG 107
R+ ++ AL +H+ +++RDLK +N+LLD + + KL DFG + + G CG
Sbjct: 127 RFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCG 186
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP Y+APE+L+ + YG AVD WA GV++Y +L G PF + + I+ +
Sbjct: 187 TPDYIAPEILQEML------YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE 240
Query: 168 YSFSSPEWNDISGYL 182
+ + D +G L
Sbjct: 241 VVYPTWLHEDATGIL 255
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ + YG AVD WA GV++Y +L G PF + + I+ + +
Sbjct: 190 YIAPEILQEML------YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY 243
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRY-SVKEALNHSFFHPKLFDQ 286
P W + ED +++ + P R S+ + H+ F +
Sbjct: 244 --PTW--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 37 AVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ--MNVKLTDFGFAR 94
A +D S + MRQ E L+H+H HS+VH D+KPENI+ + + +VK+ DFG A
Sbjct: 140 AAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT 199
Query: 95 VLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 154
L E + T + APE++ D G D+WA GV+ Y LL G PF
Sbjct: 200 KLNPDEIVKVTTATAEFAAPEIV------DREPVGFYTDMWAIGVLGYVLLSGLSPFAGE 253
Query: 155 KQMVMLRNIMEGKYSFSSPEWNDIS 179
+ L+N+ + F ++ +S
Sbjct: 254 DDLETLQNVKRCDWEFDEDAFSSVS 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
+ APE++ D G D+WA GV+ Y LL G PF + L+N+ + F
Sbjct: 216 FAAPEIV------DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF 269
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
++ +S + KD I+ LL P R +V +AL H +
Sbjct: 270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 26 LAAQVVDKGEA----AVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
L ++V GE A ++ ++ A +I +Q+ + + ++H + H DLKPENI+L D
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFI-KQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 82 QM----NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
+ ++KL DFG A ++ G + ++ GTP ++APE++ + G D+W+
Sbjct: 151 KNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV------NYEPLGLEADMWSI 204
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLR 188
GVI Y LL G PF + L NI Y F E+ + LA + +R
Sbjct: 205 GVITYILLSGASPFLGDTKQETLANITSVSYDFDE-EFFSHTSELAKDFIR 254
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
+E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 VEFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
+ L NI Y F ++ SE KD IRKLL+ R +++EAL H + P
Sbjct: 221 DTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + DLCGT Y
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDY 173
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 174 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 228
S D+ G YL PE++ M + + VD+W+ GV+ Y LVG PPF
Sbjct: 161 SSRRTDLCGTLDYLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
Query: 229 MLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
+ I +++F P++ ++E +DLI +LL P R ++E L H
Sbjct: 215 TYKRISRVEFTF--PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + DLCGT Y
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDY 177
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 178 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 228
S D+ G YL PE++ M + + VD+W+ GV+ Y LVG PPF
Sbjct: 165 SSRRTDLCGTLDYLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
Query: 229 MLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
+ I +++F P++ ++E +DLI +LL P R ++E L H
Sbjct: 219 TYKRISRVEFTF--PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + DLCGT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDY 172
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 173 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 228
S D+ G YL PE++ M + + VD+W+ GV+ Y LVG PPF
Sbjct: 160 SSRRTDLCGTLDYLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 229 MLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
+ I +++F P++ ++E +DLI +LL P R ++E L H
Sbjct: 214 TYKRISRVEFTF--PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTP 109
+ R+ +ALE +H++ V+HRD+K +NILL +VKLTDFGF A++ + K ++ GTP
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTP 180
Query: 110 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI-MEGKY 168
++APEV+ YG VD+W+ G++ ++ G PP+ + + L I G
Sbjct: 181 YWMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 169 SFSSPE 174
+PE
Sbjct: 235 ELQNPE 240
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + DLCGT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDY 172
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 173 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 228
S D+ G YL PE++ M + + VD+W+ GV+ Y LVG PPF
Sbjct: 160 SSRRTDLCGTLDYLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
Query: 229 MLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
+ I +++F P++ ++E +DLI +LL P R ++E L H
Sbjct: 214 TYKRISRVEFTF--PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE--KLMDLCGTPGY 111
Q+ + ++H H+ +VHRD+KP+NIL+D +K+ DFG A+ L + + + GT Y
Sbjct: 119 QILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQY 178
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM-VMLRNIMEGKYSF 170
+PE + ++ T D+++ G+++Y +LVG PPF + + +++I + +
Sbjct: 179 FSPEQAKGEATDECT------DIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNV 232
Query: 171 SSPEWNDISGYLAPEVLRANMFEDATGY 198
++ DI L+ +LRA + A Y
Sbjct: 233 TTDVRKDIPQSLSNVILRATEKDKANRY 260
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM-VMLRNIMEGKYS 239
Y +PE + ++ T D+++ G+++Y +LVG PPF + + +++I + +
Sbjct: 178 YFSPEQAKGEATDECT------DIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN 231
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDR 267
++ DI P+ L +L T +D+
Sbjct: 232 VTTDVRKDI---PQSLSNVILRATEKDK 256
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 26 LAAQVVDKGEA----AVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
L ++V GE A ++ ++ A +I +Q+ + + ++H + H DLKPENI+L D
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFI-KQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 82 QM----NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
+ ++KL DFG A ++ G + ++ GTP ++APE++ + G D+W+
Sbjct: 151 KNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV------NYEPLGLEADMWSI 204
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLR 188
GVI Y LL G PF + L NI Y F E+ + LA + +R
Sbjct: 205 GVITYILLSGASPFLGDTKQETLANITSVSYDFDE-EFFSHTSELAKDFIR 254
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
+E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 VEFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
+ L NI Y F ++ SE KD IRKLL+ R +++EAL H + P
Sbjct: 221 DTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 26 LAAQVVDKGEA----AVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
L ++V GE A ++ ++ A +I +Q+ + + ++H + H DLKPENI+L D
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFI-KQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 82 QM----NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
+ ++KL DFG A ++ G + ++ GTP ++APE++ + G D+W+
Sbjct: 151 KNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV------NYEPLGLEADMWSI 204
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLR 188
GVI Y LL G PF + L NI Y F E+ + LA + +R
Sbjct: 205 GVITYILLSGASPFLGDTKQETLANITSVSYDFDE-EFFSHTSELAKDFIR 254
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
+E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 VEFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
+ L NI Y F ++ SE KD IRKLL+ R +++EAL H + P
Sbjct: 221 DTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLA 113
+L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT YL
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 178
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
PE++ M + + VD+W+ GV+ Y LVG PPF R I +++F
Sbjct: 179 PEMIEGRM------HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF R I +++F
Sbjct: 176 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL R ++ E L H
Sbjct: 230 --PDF--VTEGARDLISRLLKHNASQRLTLAEVLEH 261
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 26 LAAQVVDKGEA----AVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
L ++V GE A ++ ++ A +I +Q+ + + ++H + H DLKPENI+L D
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFI-KQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 82 QM----NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
+ ++KL DFG A ++ G + ++ GTP ++APE++ + G D+W+
Sbjct: 151 KNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV------NYEPLGLEADMWSI 204
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLR 188
GVI Y LL G PF + L NI Y F E+ + LA + +R
Sbjct: 205 GVITYILLSGASPFLGDTKQETLANITAVSYDFDE-EFFSQTSELAKDFIR 254
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
+E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 VEFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
+ L NI Y F ++ SE KD IRKLL+ R +++EAL H + P
Sbjct: 221 DTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + DLCGT Y
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDY 198
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 199 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 251
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 176 NDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 232
+D+ G YL PE++ M + + VD+W+ GV+ Y LVG PPF +
Sbjct: 190 DDLCGTLDYLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 243
Query: 233 IMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
I +++F P++ ++E +DLI +LL P R ++E L H
Sbjct: 244 ISRVEFTF--PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 283
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 26 LAAQVVDKGEA----AVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
L ++V GE A ++ ++ A +I +Q+ + + ++H + H DLKPENI+L D
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFI-KQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 82 QM----NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
+ ++KL DFG A ++ G + ++ GTP ++APE++ + G D+W+
Sbjct: 151 KNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV------NYEPLGLEADMWSI 204
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLR 188
GVI Y LL G PF + L NI Y F E+ + LA + +R
Sbjct: 205 GVITYILLSGASPFLGDTKQETLANITAVSYDFDE-EFFSQTSELAKDFIR 254
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
+E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 VEFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
+ L NI Y F ++ SE KD IRKLL+ R +++EAL H + P
Sbjct: 221 DTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM---NVKLTDFGFARVL 96
++++ N +R I +Q+ E + ++H +++VH DLKP+NILL ++K+ DFG +R +
Sbjct: 126 EMVSENDVIRLI-KQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184
Query: 97 KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 156
+L ++ GTP YLAPE+L + AT D+W G+I Y LL PF
Sbjct: 185 GHACELREIMGTPEYLAPEILNYDPITTAT------DMWNIGIIAYMLLTHTSPFVGEDN 238
Query: 157 MVMLRNIMEGKYSFSSPEWNDIS 179
NI + +S ++ +S
Sbjct: 239 QETYLNISQVNVDYSEETFSSVS 261
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YLAPE+L + AT D+W G+I Y LL PF NI + +
Sbjct: 199 YLAPEILNYDPITTAT------DMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHS---------FFHPKLFDQDIEPI 291
S ++ +S+ D I+ LL+ PE R + + L+HS FHP+ +
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQ 312
Query: 292 KKDYKTASRKLSK 304
+++ K SK
Sbjct: 313 DHSVRSSEDKTSK 325
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 16/171 (9%)
Query: 26 LAAQVVDKGEA----AVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD 81
L ++V GE A ++ ++ A +I +Q+ + + ++H + H DLKPENI+L D
Sbjct: 92 LILELVSGGELFDFLAQKESLSEEEATSFI-KQILDGVNYLHTKKIAHFDLKPENIMLLD 150
Query: 82 QM----NVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
+ ++KL DFG A ++ G + ++ GTP ++APE++ + G D+W+
Sbjct: 151 KNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV------NYEPLGLEADMWSI 204
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLR 188
GVI Y LL G PF + L NI Y F E+ + LA + +R
Sbjct: 205 GVITYILLSGASPFLGDTKQETLANITAVSYDFDE-EFFSQTSELAKDFIR 254
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
+E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 VEFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+ L NI Y F ++ SE KD IRKLL+ R +++EAL H + P
Sbjct: 221 DTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280
Query: 284 FDQ---------DIEPIKKDYKTASRKLS 303
Q ++E KK Y KLS
Sbjct: 281 TQQAMVRRESVVNLENFKKQYVRRRWKLS 309
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 20 GDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79
G DL++ Q V E V + + +L AL+++ N ++HRD+KP+NILL
Sbjct: 99 GGDLRYHLQQNVHFKEETV----------KLFICELVMALDYLQNQRIIHRDMKPDNILL 148
Query: 80 DDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGV 139
D+ +V +TDF A +L + ++ + GT Y+APE+ + GY AVD W+ GV
Sbjct: 149 DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSS---RKGAGYSFAVDWWSLGV 205
Query: 140 IMYTLLVGCPPF 151
Y LL G P+
Sbjct: 206 TAYELLRGRRPY 217
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+ + GY AVD W+ GV Y LL G P+ H + + I+ +
Sbjct: 180 YMAPEMFSS---RKGAGYSFAVDWWSLGVTAYELLRGRRPY-HIRSSTSSKEIVHTFETT 235
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYS 269
+ S++ L++KLL P+ R+S
Sbjct: 236 VVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 39/161 (24%)
Query: 26 LAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN- 84
L +++ D+G+ A + S IM+ + EA++++H+ ++ HRD+KPEN+L +
Sbjct: 102 LFSRIQDRGDQAFTEREASE-----IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPN 156
Query: 85 --VKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+KLTDFGFA+ GEK Y ++ D+W+ GVIMY
Sbjct: 157 AILKLTDFGFAKE-TTGEK--------------------------YDKSCDMWSLGVIMY 189
Query: 143 TLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWNDIS 179
LL G PPF+ + M I G+Y F +PEW+++S
Sbjct: 190 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 230
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 193 EDATG--YGQAVDVWACGVIMYTLLVGCPPFWHRKQMV----MLRNIMEGKYSFSSPEWN 246
++ TG Y ++ D+W+ GVIMY LL G PPF+ + M I G+Y F +PEW+
Sbjct: 168 KETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 227
Query: 247 DISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
++SE+ K LIR LL P R ++ E +NH +
Sbjct: 228 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTP 109
+ R+ +ALE +H++ V+HRD+K +NILL +VKLTDFGF A++ + K + GTP
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 180
Query: 110 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI-MEGKY 168
++APEV+ YG VD+W+ G++ ++ G PP+ + + L I G
Sbjct: 181 YWMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 169 SFSSPE 174
+PE
Sbjct: 235 ELQNPE 240
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI-MEGKYS 239
++APEV+ YG VD+W+ G++ ++ G PP+ + + L I G
Sbjct: 182 WMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE 235
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTAS 299
+PE +S +D + + L + E R S KE L H F + P+ K A+
Sbjct: 236 LQNPE--KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEAT 293
Query: 300 R 300
+
Sbjct: 294 K 294
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTP 109
+ R+ +ALE +H++ V+HRD+K +NILL +VKLTDFGF A++ + K + GTP
Sbjct: 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP 180
Query: 110 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI-MEGKY 168
++APEV+ YG VD+W+ G++ ++ G PP+ + + L I G
Sbjct: 181 YWMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 169 SFSSPE 174
+PE
Sbjct: 235 ELQNPE 240
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI-MEGKYS 239
++APEV+ YG VD+W+ G++ ++ G PP+ + + L I G
Sbjct: 182 WMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE 235
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTAS 299
+PE +S +D + + L + E R S KE L H F + P+ K A+
Sbjct: 236 LQNPE--KLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEAT 293
Query: 300 R 300
+
Sbjct: 294 K 294
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTP 109
+ R+ +ALE +H++ V+HRD+K +NILL +VKLTDFGF A++ + K + GTP
Sbjct: 122 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTP 181
Query: 110 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI-MEGKY 168
++APEV+ YG VD+W+ G++ ++ G PP+ + + L I G
Sbjct: 182 YWMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 235
Query: 169 SFSSPE 174
+PE
Sbjct: 236 ELQNPE 241
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI-MEGKYS 239
++APEV+ YG VD+W+ G++ ++ G PP+ + + L I G
Sbjct: 183 WMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE 236
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTAS 299
+PE +S +D + + L + E R S KE + H F + P+ K A+
Sbjct: 237 LQNPE--KLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPLIAAAKEAT 294
Query: 300 R 300
+
Sbjct: 295 K 295
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 179 GTPAFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 233 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 19/136 (13%)
Query: 174 EWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230
E+ +I G ++APE++ + G D+W+ GVI Y LL G PF + L
Sbjct: 173 EFKNIFGTPAFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
Query: 231 RNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEP 290
N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK Q +
Sbjct: 227 ANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL-- 284
Query: 291 IKKDYKTASRKLSKIN 306
SRK S +N
Sbjct: 285 --------SRKASAVN 292
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + DLCGT Y
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDY 175
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 176 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 228
S +D+ G YL PE++ M + + VD+W+ GV+ Y LVG PPF
Sbjct: 163 SSRRDDLCGTLDYLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
Query: 229 MLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
+ I +++F P++ ++E +DLI +LL P R ++E L H
Sbjct: 217 TYKRISRVEFTF--PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + +LCGT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTLDY 172
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 173 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 172 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 226 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM-DLCG 107
R+ + L + +E++H ++HRD+KP N+L+ + ++K+ DFG + K + L+ + G
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVG 199
Query: 108 TPGYLAPEVLRAN--MFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
TP ++APE L +F G+A+DVWA GV +Y + G PF + M + I
Sbjct: 200 TPAFMAPESLSETRKIFS-----GKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKS 254
Query: 166 GKYSFSSPEWNDISGYLAPEVLR 188
F P+ DI+ L + R
Sbjct: 255 QALEF--PDQPDIAEDLKDLITR 275
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCGTPGYLAPEV 116
L +H +++RDLK +N++LD + ++K+ DFG + + G + CGTP Y+APE+
Sbjct: 132 GLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI 191
Query: 117 LRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
+ YG++VD WA GV++Y +L G PPF + + ++IME S+
Sbjct: 192 IAYQ------PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY 239
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 171 SSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML 230
++ E+ Y+APE++ YG++VD WA GV++Y +L G PPF + +
Sbjct: 176 TTREFCGTPDYIAPEIIAYQ------PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELF 229
Query: 231 RNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSV-----KEALNHSFFH----P 281
++IME S+ +S++ + + L+ P R ++ H+FF
Sbjct: 230 QSIMEHNVSYP----KSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWE 285
Query: 282 KLFDQDIEP 290
KL +++I+P
Sbjct: 286 KLENREIQP 294
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ + GT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ + GT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLA 113
+L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT YL
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRDTLCGTLDYLP 178
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
PE++ M + + VD+W+ GV+ Y LVG PPF R I +++F
Sbjct: 179 PEMIEGRM------HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF R I +++F
Sbjct: 176 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL R ++ E L H
Sbjct: 230 --PDF--VTEGARDLISRLLKHNASQRLTLAEVLEH 261
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 99 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ + GT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 159 NRERLLNKMXGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 208
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 173 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 228 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 198
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 199 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 251
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 198 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 251
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 252 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 283
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 131 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 189
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 190 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 242
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 189 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 242
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 243 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 274
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ + GT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM--NVKLTDFGFARVLKKGEKLMDLC 106
R+ +QL + + H+ + HRDLK EN LLD +K+ DFG+++ +
Sbjct: 119 RFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV 178
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
GTP Y+APEVL ++ G+ DVW+CGV +Y +LVG PF R ++
Sbjct: 179 GTPAYIAPEVLLRQEYD-----GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR 233
Query: 163 IMEGKYSF 170
I+ KYS
Sbjct: 234 ILSVKYSI 241
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 31/247 (12%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC 106
A++YI R E+V + HR L+ NI+ ++ + T G +L +
Sbjct: 49 AVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI 107
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACG---VIMYTLLVGCPP-------FWHRKQ 156
G + + R + +G + C + TLL G P F + K
Sbjct: 108 CNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167
Query: 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 216
V+ + K + +P Y+APEVL ++ G+ DVW+CGV +Y +LV
Sbjct: 168 SVLHS---QPKSTVGTP------AYIAPEVLLRQEYD-----GKIADVWSCGVTLYVMLV 213
Query: 217 GCPPFWH----RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKE 272
G PF R ++ I+ KYS P+ IS + LI ++ + P R S+ E
Sbjct: 214 GAYPFEDPEEPRDYRKTIQRILSVKYSI--PDDIRISPECCHLISRIFVADPATRISIPE 271
Query: 273 ALNHSFF 279
HS+F
Sbjct: 272 IKTHSWF 278
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 179 GTPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 233 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 22/142 (15%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLF 284
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280
Query: 285 DQDIEPIKKDYKTASRKLSKIN 306
Q + SRK S +N
Sbjct: 281 QQAL----------SRKASAVN 292
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 3 KGEMVAHSRV----VVRVKEEGDDLKHLAAQV-VDKGEAAVQDIIN----SNPALRYIMR 53
K E++ H + +VR KE HLA + G + I N S R+ +
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQM--NVKLTDFGFARVLKKGEKLMDLCGTPGY 111
QL + + H V HRDLK EN LLD +K+ DFG+++ + GTP Y
Sbjct: 123 QLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAY 182
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+APEVL ++ G+ DVW+CGV +Y +LVG PF
Sbjct: 183 IAPEVLLKKEYD-----GKVADVWSCGVTLYVMLVGAYPF 217
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 29/246 (11%)
Query: 47 ALRYIMRQLFEAL-EHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
A++YI R E + E+V + HR L+ NI+ ++ + T G +L +
Sbjct: 48 AVKYIERG--EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 106 CGTPGYLAPEVLRANMFEDATG--YGQAVDVWACGV-IMYTLLVGCPP-------FWHRK 155
G + + R + +G Y A+ V + + TLL G P F + K
Sbjct: 106 ICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK 165
Query: 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 215
V+ + K + +P Y+APEVL ++ G+ DVW+CGV +Y +L
Sbjct: 166 ASVLHS---QPKSAVGTP------AYIAPEVLLKKEYD-----GKVADVWSCGVTLYVML 211
Query: 216 VGCPPFWHRKQMVMLRNIMEG--KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
VG PF ++ R + ++ P++ IS + + LI ++ + P R S+ E
Sbjct: 212 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
Query: 274 LNHSFF 279
NH +F
Sbjct: 272 RNHEWF 277
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
DI P + QL + ++H + HRD+KPEN+LLD++ N+K++DFG A V +
Sbjct: 98 DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 100 --EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
E+L++ + GT Y+APE+L+ F + + VDVW+CG+++ +L G P+
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPW 207
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE+L+ F + + VDVW+CG+++ +L G P+ + + K ++
Sbjct: 172 YVAPELLKRREF-----HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
+P W I P L+ K+L+ P R ++ + +++ L
Sbjct: 227 LNP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLCG 107
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++ G
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 180 TPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 234 YEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 22/142 (15%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLF 284
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280
Query: 285 DQDIEPIKKDYKTASRKLSKIN 306
Q + SRK S +N
Sbjct: 281 QQAL----------SRKASAVN 292
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 179 GTPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 233 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 179 GTPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 233 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLA 113
+L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT YL
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 179
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 180 PEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 177 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 231 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLCG 107
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++ G
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
TP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 180 TPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 234 YEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + P
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 179 GTPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 233 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 179 GTPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 233 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 179 GTPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 233 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 22/142 (15%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLF 284
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280
Query: 285 DQDIEPIKKDYKTASRKLSKIN 306
Q + SRK S +N
Sbjct: 281 QQAL----------SRKASAVN 292
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 179 GTPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 233 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 22/142 (15%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLF 284
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280
Query: 285 DQDIEPIKKDYKTASRKLSKIN 306
Q + SRK S +N
Sbjct: 281 QQAL----------SRKASAVN 292
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 177
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 178 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 177 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 231 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 179 GTPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 233 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 179 GTPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 233 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 259
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 173 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 177
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 178 GTPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 232 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 258
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 172 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 219
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 220 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLA 113
+L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT YL
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 177
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 178 PEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 175 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 229 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQM----NVKLTDFGFARVLKKGEKLMDLC 106
++Q+ + ++H+ + H DLKPENI+L D+ +K+ DFG A + G + ++
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 177
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APE++ + G D+W+ GVI Y LL G PF + L N+
Sbjct: 178 GTPEFVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFED 194
Y F +++ S LA + +R + +D
Sbjct: 232 NYEFEDEYFSNTSA-LAKDFIRRLLVKD 258
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
E K F +PE ++APE++ + G D+W+ GVI Y LL G PF
Sbjct: 172 EFKNIFGTPE------FVAPEIV------NYEPLGLEADMWSIGVITYILLSGASPFLGD 219
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
+ L N+ Y F +++ S KD IR+LL+ P+ R +++++L H + PK
Sbjct: 220 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 172
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 173 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 172 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 226 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 176
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 177 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 229
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 176 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 229
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 230 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 261
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 3 KGEMVAHSRV----VVRVKEEGDDLKHLAAQV-VDKGEAAVQDIIN----SNPALRYIMR 53
K E++ H + +VR KE HLA + G + I N S R+ +
Sbjct: 62 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 121
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQM--NVKLTDFGFARVLKKGEKLMDLCGTPGY 111
QL + + H V HRDLK EN LLD +K+ DFG+++ + GTP Y
Sbjct: 122 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 181
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+APEVL ++ G+ DVW+CGV +Y +LVG PF
Sbjct: 182 IAPEVLLKKEYD-----GKVADVWSCGVTLYVMLVGAYPF 216
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 29/246 (11%)
Query: 47 ALRYIMRQLFEAL-EHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
A++YI R E + E+V + HR L+ NI+ ++ + T G +L +
Sbjct: 47 AVKYIERG--EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 104
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACG---VIMYTLLVGCPP-------FWHRK 155
G + + R + +G + C + TLL G P F + K
Sbjct: 105 ICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 164
Query: 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 215
V+ + K + +P Y+APEVL ++ G+ DVW+CGV +Y +L
Sbjct: 165 SSVLHS---QPKSTVGTP------AYIAPEVLLKKEYD-----GKVADVWSCGVTLYVML 210
Query: 216 VGCPPFWHRKQMVMLRNIMEG--KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
VG PF ++ R + ++ P++ IS + + LI ++ + P R S+ E
Sbjct: 211 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 270
Query: 274 LNHSFF 279
NH +F
Sbjct: 271 RNHEWF 276
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 113 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 171
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 172 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 224
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 171 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 224
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 225 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLA 113
+L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT YL
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLP 177
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 178 PEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 175 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 229 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 3 KGEMVAHSRV----VVRVKEEGDDLKHLAAQV-VDKGEAAVQDIIN----SNPALRYIMR 53
K E++ H + +VR KE HLA + G + I N S R+ +
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQM--NVKLTDFGFARVLKKGEKLMDLCGTPGY 111
QL + + H V HRDLK EN LLD +K+ DFG+++ + GTP Y
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 182
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+APEVL ++ G+ DVW+CGV +Y +LVG PF
Sbjct: 183 IAPEVLLKKEYD-----GKVADVWSCGVTLYVMLVGAYPF 217
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 27/245 (11%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC 106
A++YI R + +V + HR L+ NI+ ++ + T G +L +
Sbjct: 48 AVKYIERGE-KIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACG---VIMYTLLVGCPP-------FWHRKQ 156
G + + R + +G + C + TLL G P F + K
Sbjct: 107 CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 166
Query: 157 MVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 216
V+ + K + +P Y+APEVL ++ G+ DVW+CGV +Y +LV
Sbjct: 167 SVLHS---QPKSTVGTP------AYIAPEVLLKKEYD-----GKVADVWSCGVTLYVMLV 212
Query: 217 GCPPFWHRKQMVMLRNIMEG--KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEAL 274
G PF ++ R + ++ P++ IS + + LI ++ + P R S+ E
Sbjct: 213 GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIR 272
Query: 275 NHSFF 279
NH +F
Sbjct: 273 NHEWF 277
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDY 174
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 175 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 227
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 174 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 227
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 228 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 259
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 34 GEAAVQDIINSNPA-------LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVK 86
G +V D+I + + YI R++ L H+H H V+HRD+K +N+LL + VK
Sbjct: 110 GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVK 169
Query: 87 LTDFGFARVLKKG-EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145
L DFG + L + + GTP ++APEV+ + DAT Y D+W+ G+ +
Sbjct: 170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDAT-YDFKSDLWSLGITAIEMA 228
Query: 146 VGCPPF 151
G PP
Sbjct: 229 EGAPPL 234
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTP 109
+ R+ +ALE +H++ V+HR++K +NILL +VKLTDFGF A++ + K + GTP
Sbjct: 122 VCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP 181
Query: 110 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI-MEGKY 168
++APEV+ YG VD+W+ G++ ++ G PP+ + + L I G
Sbjct: 182 YWMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 235
Query: 169 SFSSPE 174
+PE
Sbjct: 236 ELQNPE 241
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI-MEGKYS 239
++APEV+ YG VD+W+ G++ ++ G PP+ + + L I G
Sbjct: 183 WMAPEVVTRK------AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE 236
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTAS 299
+PE +S +D + + L + E R S KE + H F + P+ K A+
Sbjct: 237 LQNPE--KLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPLIAAAKEAT 294
Query: 300 R 300
+
Sbjct: 295 K 295
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDY 175
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 176 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 175 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 229 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 111 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 169
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 170 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 222
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 169 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 222
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 223 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 254
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTLDY 172
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 173 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 172 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 226 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVL 117
LE +H +V+RDLKPENILLDD +++++D G A + +G+ + GT GY+APEV+
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 118 RANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
+ Y + D WA G ++Y ++ G PF RK+ +
Sbjct: 358 KNER------YTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 392
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GY+APEV++ Y + D WA G ++Y ++ G PF RK+ + R +E
Sbjct: 350 GYMAPEVVKNER------YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVK 402
Query: 240 FSSPEWND-ISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
E+++ S + L +LL P +R S +E H F
Sbjct: 403 EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDY 172
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 173 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 172 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 226 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDY 172
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 173 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 172 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 226 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLA 113
+L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT YL
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLP 177
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 178 PEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 175 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 229 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 7/110 (6%)
Query: 55 LFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTPGYLA 113
+ AL ++HN V+HRD+K ++ILL +KL+DFGF A+V K+ K L GTP ++A
Sbjct: 150 VLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMA 209
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
PEV+ YG VD+W+ G+++ ++ G PP+++ + +R I
Sbjct: 210 PEVI------SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI 253
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
++APEV+ YG VD+W+ G+++ ++ G PP+++ + +R I +
Sbjct: 207 WMAPEVI------SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDS-LPP 259
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYK 296
+ + +S + + +L+ P R + +E L H F I P+ + Y+
Sbjct: 260 RVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPSCIVPLMRQYR 315
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 114 ITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDY 172
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 173 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTF 225
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 172 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTF 225
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 226 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVL 117
LE +H +V+RDLKPENILLDD +++++D G A + +G+ + GT GY+APEV+
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 118 RANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
+ Y + D WA G ++Y ++ G PF RK+ +
Sbjct: 358 KNER------YTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 392
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
GY+APEV++ Y + D WA G ++Y ++ G PF RK+ + R +E
Sbjct: 350 GYMAPEVVKNER------YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVK 402
Query: 240 FSSPEWND-ISEDPKDLIRKLLIVTPEDRY-----SVKEALNHSFF 279
E+++ S + L +LL P +R S +E H F
Sbjct: 403 EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 3 KGEMVAHSRV----VVRVKEEGDDLKHLAAQV-VDKGEAAVQDIIN----SNPALRYIMR 53
K E++ H + +VR KE HLA + G + I N S R+ +
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQM--NVKLTDFGFARVLKKGEKLMDLCGTPGY 111
QL + + H V HRDLK EN LLD +K+ FG+++ + D GTP Y
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAY 182
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+APEVL ++ G+ DVW+CGV +Y +LVG PF
Sbjct: 183 IAPEVLLKKEYD-----GKVADVWSCGVTLYVMLVGAYPF 217
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 29/246 (11%)
Query: 47 ALRYIMRQLFEAL-EHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
A++YI R E + E+V + HR L+ NI+ ++ + T G +L +
Sbjct: 48 AVKYIERG--EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACG---VIMYTLLVGCPP-------FWHRK 155
G + + R + +G + C + TLL G P F + K
Sbjct: 106 ICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
Query: 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 215
V+ + K + +P Y+APEVL ++ G+ DVW+CGV +Y +L
Sbjct: 166 SSVLHS---QPKDTVGTP------AYIAPEVLLKKEYD-----GKVADVWSCGVTLYVML 211
Query: 216 VGCPPFWHRKQMVMLRNIMEG--KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
VG PF ++ R + ++ P++ IS + + LI ++ + P R S+ E
Sbjct: 212 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
Query: 274 LNHSFF 279
NH +F
Sbjct: 272 RNHEWF 277
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 100/240 (41%), Gaps = 65/240 (27%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNV-KLTDFGFARVLKKGEKLMDLC 106
++ M QL +L ++H+ + HRD+KP+N+LLD V KL DFG A++L GE +
Sbjct: 143 IKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXI 202
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
+ Y APE++ AT Y +D+W+ G +M L+ G P
Sbjct: 203 CSRYYRAPELIFG-----ATNYTTNIDIWSTGCVMAELMQGQP----------------- 240
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 226
+F +G Q V++ ++G P R+Q
Sbjct: 241 ------------------------LFPGESGIDQLVEIIK--------VLGTP---SREQ 265
Query: 227 M-VMLRNIMEGKY------SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+ M N ME K+ FS D DLI +LL TP R + EAL H FF
Sbjct: 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 71/261 (27%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 124 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHT 183
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 184 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 238
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ CG+
Sbjct: 239 LNHILG---ILGSPSQEDLN---------------------------CGI---------- 258
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPE-----WNDI--SEDPK--DLIRKLLIVTPEDRYSV 270
N+ Y S P WN + + D K DL+ K+L P R V
Sbjct: 259 ------------NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 306
Query: 271 KEALNHSFFHPKLFDQDIEPI 291
++AL H + + +D EPI
Sbjct: 307 EQALAHPYL-AQYYDPSDEPI 326
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDTLCGTLDY 173
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 174 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 173 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 227 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 25/160 (15%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD---DQMNVKLTDFGFARVLKKGEKLMD 104
+R ++ + AL ++H + ++HRDLKPENI+L ++ K+ D G+A+ L +GE +
Sbjct: 123 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 182
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF--------WHRK- 155
GT YLAPE+L + Y VD W+ G + + + G PF WH K
Sbjct: 183 FVGTLQYLAPELL------EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 236
Query: 156 -----QMVMLRNIMEGKYSFSS--PEWNDISGYLAPEVLR 188
+ +++ + + G FSS P N +SG LA ++ R
Sbjct: 237 REKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLER 276
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 22/85 (25%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF--------WHRK------Q 226
YLAPE+L + Y VD W+ G + + + G PF WH K +
Sbjct: 189 YLAPELL------EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNE 242
Query: 227 MVMLRNIMEGKYSFSS--PEWNDIS 249
+++ + + G FSS P N +S
Sbjct: 243 HIVVYDDLTGAVKFSSVLPTPNHLS 267
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 25/160 (15%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD---DQMNVKLTDFGFARVLKKGEKLMD 104
+R ++ + AL ++H + ++HRDLKPENI+L ++ K+ D G+A+ L +GE +
Sbjct: 124 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 183
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF--------WHRK- 155
GT YLAPE+L + Y VD W+ G + + + G PF WH K
Sbjct: 184 FVGTLQYLAPELL------EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKV 237
Query: 156 -----QMVMLRNIMEGKYSFSS--PEWNDISGYLAPEVLR 188
+ +++ + + G FSS P N +SG LA ++ R
Sbjct: 238 REKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLER 277
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 22/85 (25%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF--------WHRK------Q 226
YLAPE+L + Y VD W+ G + + + G PF WH K +
Sbjct: 190 YLAPELL------EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNE 243
Query: 227 MVMLRNIMEGKYSFSS--PEWNDIS 249
+++ + + G FSS P N +S
Sbjct: 244 HIVVYDDLTGAVKFSSVLPTPNHLS 268
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK-GEKLMDLCGTPGYL 112
Q+ + H+H+++HRD+KPENIL+ VKL DFGFAR L GE D T Y
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR 191
Query: 113 APEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
APE+L ++ YG+AVDVWA G ++ + +G P F + L +IM
Sbjct: 192 APELLVGDV-----KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 32/127 (25%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM------ 234
Y APE+L ++ YG+AVDVWA G ++ + +G P F + L +IM
Sbjct: 190 YRAPELLVGDV-----KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNL 244
Query: 235 --EGKYSFSS---------PE----------WNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
+ F+ PE + +SE DL +K L + P+ R E
Sbjct: 245 IPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304
Query: 274 LNHSFFH 280
L+H FF
Sbjct: 305 LHHDFFQ 311
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ +FG++ V + LCGT Y
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDY 174
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 175 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 227
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 174 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 227
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 228 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 259
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 117/286 (40%), Gaps = 55/286 (19%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY VD+W+
Sbjct: 158 VVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVIL------GMGYAANVDIWSV 211
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM L+ GC F + ++E +P + L P V N E+
Sbjct: 212 GCIMGELVKGCVIFQGTDHIDQWNKVIE---QLGTPS-AEFMAALQPTV--RNYVENRPK 265
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWND--ISEDPKDL 255
Y G+ L P W F S D + +DL
Sbjct: 266 YP--------GIKFEELF----PDW----------------IFPSESERDKIKTSQARDL 297
Query: 256 IRKLLIVTPEDRYSVKEALNHSFFH------------PKLFDQDIE 289
+ K+L++ P+ R SV EAL H + P+++D +E
Sbjct: 298 LSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLE 343
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFA-RVLKKGEKLMDLC- 106
R+ + ++ A++ VH VHRD+KP+NIL+D +++L DFG ++++ G +
Sbjct: 178 RFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV 237
Query: 107 GTPGYLAPEVLRANMFEDATG-YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GTP Y++PE+L+A E G YG D W+ GV MY +L G PF+ + IM
Sbjct: 238 GTPDYISPEILQA--MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
Query: 166 GKYSFSSP 173
K F P
Sbjct: 296 HKERFQFP 303
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 158 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 217
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 218 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 257
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 222 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 277 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336
Query: 276 HSFF 279
HSFF
Sbjct: 337 HSFF 340
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 152 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 211
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 212 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 251
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 216 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 270
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 271 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 330
Query: 276 HSFF 279
HSFF
Sbjct: 331 HSFF 334
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 158 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 217
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 218 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 257
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 222 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 277 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336
Query: 276 HSFF 279
HSFF
Sbjct: 337 HSFF 340
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLA 113
+L AL + H+ V+HRD+KPEN+LL +K+ +FG++ V + LCGT YL
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLP 177
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 178 PEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 175 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 229 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 136 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 195
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 196 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 235
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 200 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 254
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 255 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 314
Query: 276 HSFF 279
HSFF
Sbjct: 315 HSFF 318
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 160 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 219
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 220 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 259
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 224 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 278
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 279 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 338
Query: 276 HSFF 279
HSFF
Sbjct: 339 HSFF 342
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 136 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 195
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 196 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 235
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 200 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 254
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 255 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 314
Query: 276 HSFF 279
HSFF
Sbjct: 315 HSFF 318
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 120 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 180 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 234
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SPE D++ + L+A + L+ P
Sbjct: 235 LNHILG---ILGSPEQEDLNCIIN---LKARNY----------------------LLSLP 266
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 267 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 307
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 308 HPYLE-QYYDPSDEPI 322
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 162 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 221
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 222 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 261
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 226 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 280
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 281 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 340
Query: 276 HSFF 279
HSFF
Sbjct: 341 HSFF 344
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 203 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 262
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 263 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 302
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 267 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 321
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 322 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 381
Query: 276 HSFF 279
HSFF
Sbjct: 382 HSFF 385
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 129 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 188
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 189 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 228
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 193 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 247
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 248 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 307
Query: 276 HSFF 279
HSFF
Sbjct: 308 HSFF 311
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 132 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 191
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 192 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 231
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 196 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 250
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 251 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 310
Query: 276 HSFF 279
HSFF
Sbjct: 311 HSFF 314
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 143 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 202
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 203 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 242
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 207 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 261
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 262 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 321
Query: 276 HSFF 279
HSFF
Sbjct: 322 HSFF 325
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
++ M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE +
Sbjct: 137 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 196
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 197 CSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 236
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 201 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 255
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 256 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 315
Query: 276 HSFF 279
HSFF
Sbjct: 316 HSFF 319
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 223
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 276 HSFF 279
HSFF
Sbjct: 303 HSFF 306
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMD--LC 106
R+ + ++ A++ +H VHRD+KP+N+LLD +++L DFG + +
Sbjct: 194 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 107 GTPGYLAPEVLRANMFEDATG-YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GTP Y++PE+L+A ED G YG D W+ GV MY +L G PF+ + IM
Sbjct: 254 GTPDYISPEILQA--MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
Query: 166 GKYSFSSP 173
+ F P
Sbjct: 312 HEERFQFP 319
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 223
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 276 HSFF 279
HSFF
Sbjct: 303 HSFF 306
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + LCGT Y
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 177
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE + + + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 178 LPPEXI------EGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE + + + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 177 YLPPEXI------EGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 231 --PDF--VTEGARDLISRLLKHNPSQRPXLREVLEH 262
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 223
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 276 HSFF 279
HSFF
Sbjct: 303 HSFF 306
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 223
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 276 HSFF 279
HSFF
Sbjct: 303 HSFF 306
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 223
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 276 HSFF 279
HSFF
Sbjct: 303 HSFF 306
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 223
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F+ P+ W + P + L +LL TP R + EA
Sbjct: 243 TREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 276 HSFF 279
HSFF
Sbjct: 303 HSFF 306
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 223
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 188 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 242
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F+ P+ W + P + L +LL TP R + EA
Sbjct: 243 TREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 276 HSFF 279
HSFF
Sbjct: 303 HSFF 306
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE + +
Sbjct: 129 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 188
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 189 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 224
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 189 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 243
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 244 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 303
Query: 276 HSFF 279
HSFF
Sbjct: 304 HSFF 307
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMD--LC 106
R+ + ++ A++ +H VHRD+KP+N+LLD +++L DFG + +
Sbjct: 178 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 107 GTPGYLAPEVLRANMFEDATG-YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GTP Y++PE+L+A ED G YG D W+ GV MY +L G PF+ + IM
Sbjct: 238 GTPDYISPEILQA--MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
Query: 166 GKYSFSSP 173
+ F P
Sbjct: 296 HEERFQFP 303
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 181 YLAPEVLRANMFEDATG-YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYS 239
Y++PE+L+A ED G YG D W+ GV MY +L G PF+ + IM +
Sbjct: 242 YISPEILQA--MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEER 299
Query: 240 FSSPEW-NDISEDPKDLIRKLLIVTPEDRY---SVKEALNHSFF 279
F P D+SE+ KDLI++ LI + E R +++ H+FF
Sbjct: 300 FQFPSHVTDVSEEAKDLIQR-LICSRERRLGQNGIEDFKKHAFF 342
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M QLF +L ++H+ + HRD+KP+N+LLD D +KL DFG A+ L +GE + +
Sbjct: 132 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 191
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
Y APE++ AT Y ++DVW+ G ++ LL+G P F
Sbjct: 192 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIF 227
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI------- 233
Y APE++ AT Y ++DVW+ G ++ LL+G P F + L I
Sbjct: 192 YRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 246
Query: 234 -------MEGKYS-FSSPE-----WNDI--SEDPKD---LIRKLLIVTPEDRYSVKEALN 275
M Y+ F P+ W + P + L +LL TP R + EA
Sbjct: 247 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 306
Query: 276 HSFF 279
HSFF
Sbjct: 307 HSFF 310
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVA 191
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 192 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 244
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 245 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 287
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 288 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 322
Query: 288 IEPIKKDYKTAS 299
EP+ Y +S
Sbjct: 323 DEPVADPYDQSS 334
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 61/270 (22%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+L++ ++K+ DFG AR+
Sbjct: 142 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHT 201
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 202 GFLTEXVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 256
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ C + M
Sbjct: 257 LNHILG---ILGSPSQEDLN---------------------------CIINMKA------ 280
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
RN ++ S + W + D K DL+ ++L P R +V+EAL
Sbjct: 281 -----------RNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALA 329
Query: 276 HSFFHPKLFDQDIEPIKKDYKTASRKLSKI 305
H + + +D EP+ ++ T + +L +
Sbjct: 330 HPYLE-QYYDPTDEPVAEEPFTFAMELDDL 358
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M +L +AL + H V+HRD+KPEN+L+ + +K+ DFG++ V + +CGT
Sbjct: 120 FMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLD 178
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
YL PE++ + + + VD+W GV+ Y LVG PPF R I+ F
Sbjct: 179 YLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 232
Query: 171 SSPEWNDISGYLAPEVLR 188
P +D S L ++LR
Sbjct: 233 -PPFLSDGSKDLISKLLR 249
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ + + + VD+W GV+ Y LVG PPF R I+ F
Sbjct: 179 YLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 232
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P + +S+ KDLI KLL P R +K + H
Sbjct: 233 --PPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEH 264
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M +L +AL + H V+HRD+KPEN+L+ + +K+ DFG++ V + +CGT
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLD 177
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
YL PE++ + + + VD+W GV+ Y LVG PPF R I+ F
Sbjct: 178 YLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 171 SSPEWNDISGYLAPEVLR 188
P +D S L ++LR
Sbjct: 232 -PPFLSDGSKDLISKLLR 248
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ + + + VD+W GV+ Y LVG PPF R I+ F
Sbjct: 178 YLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P + +S+ KDLI KLL P R +K + H
Sbjct: 232 --PPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
M +L +AL + H V+HRD+KPEN+L+ + +K+ DFG++ V + +CGT
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLD 177
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
YL PE++ + + + VD+W GV+ Y LVG PPF R I+ F
Sbjct: 178 YLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 171 SSPEWNDISGYLAPEVLR 188
P +D S L ++LR
Sbjct: 232 -PPFLSDGSKDLISKLLR 248
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ + + + VD+W GV+ Y LVG PPF R I+ F
Sbjct: 178 YLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P + +S+ KDLI KLL P R +K + H
Sbjct: 232 --PPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ +A Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIML-----NAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 3 KGEMVAHSRV----VVRVKEEGDDLKHLAAQV-VDKGEAAVQDIIN----SNPALRYIMR 53
K E++ H + +VR KE HLA + G + I N S R+ +
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQM--NVKLTDFGFARVLKKGEKLMDLCGTPGY 111
QL + + H V HRDLK EN LLD +K+ FG+++ + GTP Y
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAY 182
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+APEVL ++ G+ DVW+CGV +Y +LVG PF
Sbjct: 183 IAPEVLLKKEYD-----GKVADVWSCGVTLYVMLVGAYPF 217
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 29/246 (11%)
Query: 47 ALRYIMRQLFEAL-EHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
A++YI R E + E+V + HR L+ NI+ ++ + T G +L +
Sbjct: 48 AVKYIERG--EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACG---VIMYTLLVGCPP-------FWHRK 155
G + + R + +G + C + TLL G P F + K
Sbjct: 106 ICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
Query: 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 215
V+ + K + +P Y+APEVL ++ G+ DVW+CGV +Y +L
Sbjct: 166 SSVLHS---QPKSTVGTP------AYIAPEVLLKKEYD-----GKVADVWSCGVTLYVML 211
Query: 216 VGCPPFWHRKQMVMLRNIMEG--KYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
VG PF ++ R + ++ P++ IS + + LI ++ + P R S+ E
Sbjct: 212 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
Query: 274 LNHSFF 279
NH +F
Sbjct: 272 RNHEWF 277
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 55/286 (19%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 97 EEFQDV-YLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 155
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 156 VVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 209
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM L+ G F + ++E +P + L P V N E+
Sbjct: 210 GCIMGELVKGSVIFQGTDHIDQWNKVIE---QLGTPS-AEFMAALQPTV--RNYVENRPA 263
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWND--ISEDPKDL 255
Y G+ L P W F S D + +DL
Sbjct: 264 YP--------GIAFEELF----PDW----------------IFPSESERDKIKTSQARDL 295
Query: 256 IRKLLIVTPEDRYSVKEALNHSFFH------------PKLFDQDIE 289
+ K+L++ P+ R SV EAL H + P+++D +E
Sbjct: 296 LSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLE 341
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 105/264 (39%), Gaps = 64/264 (24%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC 106
++ +M QL L+ +H+H VVHRDLKP+NIL+ +KL DFG AR+ L +
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
T Y APEVL + Y VD+W+ G I
Sbjct: 181 VTLWYRAPEVLL------QSSYATPVDLWSVGCIF------------------------- 209
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 226
A MF + + DV G I+ + + W R
Sbjct: 210 ----------------------AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR-D 246
Query: 227 MVMLRNIMEGKYSFSSPEW-NDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFD 285
+ + R K + ++ DI E KDL+ K L P R S AL+H +F
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF------ 300
Query: 286 QDIEPIKKDYKT---ASRKLSKIN 306
QD+E K++ + S+ S++N
Sbjct: 301 QDLERCKENLDSHLPPSQNTSELN 324
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 122 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT 181
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 182 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 237 LNHILG---ILGSPSQEDLNXIIN---LKARNY----------------------LLSLP 268
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 269 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 310 HPYLE-QYYDPSDEPI 324
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 122 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 182 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 237 LNHILG---ILGSPSQEDLNXIIN---LKARNY----------------------LLSLP 268
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 269 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 310 HPYLE-QYYDPSDEPI 324
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 186 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 241 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 272
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 273 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 314 HPYLE-QYYDPSDEPI 328
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 124 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 184 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 238
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 239 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 270
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 271 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 312 HPYLE-QYYDPSDEPI 326
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 142 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 201
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 202 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 256
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 257 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 288
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 289 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 329
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 330 HPYLE-QYYDPSDEPI 344
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 122 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 182 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 237 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 268
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 269 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 310 HPYLE-QYYDPSDEPI 324
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 124 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 184 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 238
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 239 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 270
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 271 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 312 HPYL-AQYYDPSDEPI 326
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 130 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 189
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 190 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 244
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 245 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 276
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 277 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 317
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 318 HPYLE-QYYDPSDEPI 332
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 122 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 182 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 237 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 268
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 269 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 310 HPYLE-QYYDPSDEPI 324
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 122 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 182 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 237 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 268
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 269 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 310 HPYLE-QYYDPSDEPI 324
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
Q + S +R+ ++ LEH+HN VV+RDLKP NILLD+ +V+++D G A K
Sbjct: 285 QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344
Query: 99 GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155
+K GT GY+APEVL + Y + D ++ G +++ LL G PF K
Sbjct: 345 -KKPHASVGTHGYMAPEVL-----QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 225
GY+APEVL + Y + D ++ G +++ LL G PF K
Sbjct: 355 GYMAPEVL-----QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 186 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 241 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 272
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 273 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 314 HPYLE-QYYDPSDEPI 328
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
Q + S +R+ ++ LEH+HN VV+RDLKP NILLD+ +V+++D G A K
Sbjct: 284 QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 343
Query: 99 GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155
+K GT GY+APEVL + Y + D ++ G +++ LL G PF K
Sbjct: 344 -KKPHASVGTHGYMAPEVL-----QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 394
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 225
GY+APEVL + Y + D ++ G +++ LL G PF K
Sbjct: 354 GYMAPEVL-----QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 394
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 142 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 201
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 202 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 256
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 257 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 288
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 289 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 329
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 330 HPYLE-QYYDPSDEPI 344
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 120 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 180 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 234
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 235 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 266
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 267 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 307
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 308 HPYLE-QYYDPSDEPI 322
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 127 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 187 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 241
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 242 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 273
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 274 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 314
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 315 HPYLE-QYYDPSDEPI 329
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 128 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 187
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 188 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 242
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 243 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 274
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 275 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 315
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 316 HPYLE-QYYDPSDEPI 330
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 119 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 178
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 179 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 233
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 234 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 265
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 266 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 306
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 307 HPYLE-QYYDPSDEPI 321
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 186 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 241 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 272
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 273 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 314 HPYLE-QYYDPSDEPI 328
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEV 116
L+ +H+ +V+RDLK +NILLD ++K+ DFG + G+ K + CGTP Y+APE+
Sbjct: 131 GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEI 190
Query: 117 LRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
L Y +VD W+ GV++Y +L+G PF
Sbjct: 191 LLGQ------KYNHSVDWWSFGVLLYEMLIGQSPF 219
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 174 EWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 233
E+ Y+APE+L Y +VD W+ GV++Y +L+G PF + + + +I
Sbjct: 178 EFCGTPDYIAPEILLGQ------KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
Query: 234 -MEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVK 271
M+ + P W + ++ KDL+ KL + PE R V+
Sbjct: 232 RMDNPF---YPRW--LEKEAKDLLVKLFVREPEKRLGVR 265
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 186 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 241 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 272
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 273 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 314 HPYLE-QYYDPSDEPI 328
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVA 191
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 192 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 244
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 245 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 287
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 288 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 322
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 323 DEPVADPY 330
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 186 GFLTEYVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 241 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 272
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 273 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 314 HPYLE-QYYDPSDEPI 328
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 186 GFLXEXVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 241 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 272
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 273 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 314 HPYLE-QYYDPSDEPI 328
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 61/256 (23%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
SN + Y + Q+ L+++H+ +V+HRDLKP N+LL+ ++K+ DFG ARV
Sbjct: 127 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186
Query: 102 --LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE++ ++ GY +++D+W+ G I+ +L P F + +
Sbjct: 187 GFLXEXVATRWYRAPEIML-----NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 241
Query: 160 LRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
L +I+ SP D++ + L+A + L+ P
Sbjct: 242 LNHILG---ILGSPSQEDLNCIIN---LKARNY----------------------LLSLP 273
Query: 220 PFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEALN 275
H+ ++ WN + + D K DL+ K+L P R V++AL
Sbjct: 274 ---HKNKV----------------PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 314
Query: 276 HSFFHPKLFDQDIEPI 291
H + + +D EPI
Sbjct: 315 HPYLE-QYYDPSDEPI 329
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
Q + S +R+ ++ LEH+HN VV+RDLKP NILLD+ +V+++D G A K
Sbjct: 285 QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344
Query: 99 GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155
+K GT GY+APEVL + Y + D ++ G +++ LL G PF K
Sbjct: 345 -KKPHASVGTHGYMAPEVL-----QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 225
GY+APEVL + Y + D ++ G +++ LL G PF K
Sbjct: 355 GYMAPEVL-----QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
Q + S +R+ ++ LEH+HN VV+RDLKP NILLD+ +V+++D G A K
Sbjct: 285 QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344
Query: 99 GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155
+K GT GY+APEVL + Y + D ++ G +++ LL G PF K
Sbjct: 345 -KKPHASVGTHGYMAPEVL-----QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 180 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 225
GY+APEVL + Y + D ++ G +++ LL G PF K
Sbjct: 355 GYMAPEVL-----QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVA 191
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 192 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 244
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 245 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 287
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 288 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 322
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 323 DEPVADPY 330
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 138 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVA 195
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 196 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 248
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 249 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 291
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 292 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 326
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 327 DEPVADPY 334
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVA 189
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 190 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 242
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 243 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 285
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 286 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 320
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 321 DEPVADPY 328
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVA 189
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 190 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 242
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 243 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 285
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 286 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 320
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 321 DEPVADPY 328
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-AQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 196
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 197 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 249
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 250 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 292
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 293 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 327
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 328 DEPVADPY 335
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 196
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 197 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 249
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 250 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 292
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 293 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 327
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 328 DEPVADPY 335
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 196
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 197 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 249
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 250 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 292
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 293 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 327
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 328 DEPVADPY 335
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLA 113
+L AL + H+ V+HRD+KPEN+LL +K+ DFG++ V + L GT YL
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLXGTLDYLP 179
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 180 PEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 177 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 231 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVA 186
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 187 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 239
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 240 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 282
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 283 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 317
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 318 DEPVADPY 325
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 138 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 195
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 196 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 248
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 249 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 291
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 292 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 326
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 327 DEPVADPY 334
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 146 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 203
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 204 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 256
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 257 ----------LVGTPGAELLKKISSESARNYIQSL-AQMPKMNFANVFIGANPL------ 299
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 300 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 334
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 335 DEPVADPY 342
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 50/238 (21%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S ++Y++ Q+ + L+++H+ VVHRDLKP N+ +++ +K+ DFG AR ++
Sbjct: 124 SEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMT 181
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
T Y APEV+ + M Y Q VD+W+ G IM +L G F + + L I
Sbjct: 182 GYVVTRWYRAPEVILSWM-----HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
++ ++G E ++ + A Y Q++ P
Sbjct: 237 LK------------VTGVPGTEFVQKLNDKAAKSYIQSL-----------------PQTP 267
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
RK L + +SP+ DL+ K+L + + R + +AL H FF P
Sbjct: 268 RKDFTQL-------FPRASPQ-------AADLLEKMLELDVDKRLTAAQALTHPFFEP 311
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 50/238 (21%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S ++Y++ Q+ + L+++H+ VVHRDLKP N+ +++ +K+ DFG AR ++
Sbjct: 142 SEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMT 199
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI 163
T Y APEV+ + M Y Q VD+W+ G IM +L G F + + L I
Sbjct: 200 GYVVTRWYRAPEVILSWMH-----YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 254
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
++ ++G E ++ + A Y Q++ P
Sbjct: 255 LK------------VTGVPGTEFVQKLNDKAAKSYIQSL-----------------PQTP 285
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
RK L + +SP+ DL+ K+L + + R + +AL H FF P
Sbjct: 286 RKDFTQL-------FPRASPQ-------AADLLEKMLELDVDKRLTAAQALTHPFFEP 329
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVA 190
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 191 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 243
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 244 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 286
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 287 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 321
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 322 DEPVADPY 329
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 146 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 203
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 204 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 256
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 257 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 299
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 300 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 334
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 335 DEPVADPY 342
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 97/248 (39%), Gaps = 61/248 (24%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC 106
++ +M QL L+ +H+H VVHRDLKP+NIL+ +KL DFG AR+ L +
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
T Y APEVL + Y VD+W+ G I
Sbjct: 181 VTLWYRAPEVLL------QSSYATPVDLWSVGCIF------------------------- 209
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 226
A MF + + DV G I+ + + W R
Sbjct: 210 ----------------------AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR-D 246
Query: 227 MVMLRNIMEGKYSFSSPEW-NDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFD 285
+ + R K + ++ DI E KDL+ K L P R S AL+H +F
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF------ 300
Query: 286 QDIEPIKK 293
QD+E K+
Sbjct: 301 QDLERCKE 308
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 150 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYVA 207
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 208 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 260
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 261 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 303
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 304 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 338
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 339 DEPVADPY 346
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 190
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 191 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 243
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 244 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 286
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 287 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 321
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 322 DEPVADPY 329
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 186
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 187 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 239
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 240 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 282
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 283 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 317
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 318 DEPVADPY 325
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 147 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 204
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 205 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 257
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 258 ----------LVGTPGAELLKKISSESARNYIQSL-AQMPKMNFANVFIGANPL------ 300
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 301 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 335
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 336 DEPVADPY 343
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 190
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 191 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 243
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 244 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 286
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 287 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 321
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 322 DEPVADPY 329
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 189
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 190 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 242
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 243 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 285
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 286 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 320
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 321 DEPVADPY 328
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 126 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 183
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 184 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 236
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 237 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 279
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 280 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 314
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 315 DEPVADPY 322
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 147 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 204
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 205 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 257
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 258 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 300
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 301 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 335
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 336 DEPVADPY 343
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 191
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 192 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 244
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 245 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 287
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 288 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 322
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 323 DEPVADPY 330
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 186
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 187 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 239
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 240 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 282
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 283 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 317
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 318 DEPVADPY 325
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 147 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXVA 204
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 205 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 257
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 258 ----------LVGTPGAELLKKISSESARNYIQSL-AQMPKMNFANVFIGANPL------ 300
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 301 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 335
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 336 DEPVADPY 343
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 150 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 207
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 208 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 260
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 261 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 303
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 304 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 338
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 339 DEPVADPY 346
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 190
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 191 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 243
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 244 ----------LVGTPGAELLKKISSESARNYIQSL-AQMPKMNFANVFIGANPL------ 286
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 287 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 321
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 322 DEPVADPY 329
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA 180
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 181 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 233
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 234 ----------LVGTPGAELLKKISSESARNYIQSL-AQMPKMNFANVFIGANPL------ 276
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 277 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 311
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 312 DEPVADPY 319
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 137 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 194
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 195 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 247
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 248 ----------LVGTPGAELLKKISSESARNYIQSL-AQMPKMNFANVFIGANPL------ 290
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 291 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 325
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 326 DEPVADPY 333
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 186
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 187 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 239
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 240 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 282
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 283 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 317
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 318 DEPVADPY 325
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTPGYLAPEV 116
L+ +H+ +V+RDLK +NILLD ++K+ DFG + G+ K CGTP Y+APE+
Sbjct: 130 GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEI 189
Query: 117 LRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
L Y +VD W+ GV++Y +L+G PF
Sbjct: 190 LLGQ------KYNHSVDWWSFGVLLYEMLIGQSPF 218
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNI-MEGKYS 239
Y+APE+L Y +VD W+ GV++Y +L+G PF + + + +I M+ +
Sbjct: 184 YIAPEILLGQ------KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF- 236
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVK 271
P W + ++ KDL+ KL + PE R V+
Sbjct: 237 --YPRW--LEKEAKDLLVKLFVREPEKRLGVR 264
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-AQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 125 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 182
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 183 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 235
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 236 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 278
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 279 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 313
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 314 DEPVADPY 321
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 11/122 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK-KGEKLMDLC 106
++ I Q +A+ H H+ +HRD+KPENIL+ +KL DFGFAR+L + D
Sbjct: 104 VKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV 163
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK----QMVMLRN 162
T Y +PE+L + T YG VDVWA G + LL G P W K Q+ ++R
Sbjct: 164 ATRWYRSPELLVGD-----TQYGPPVDVWAIGCVFAELLSGV-PLWPGKSDVDQLYLIRK 217
Query: 163 IM 164
+
Sbjct: 218 TL 219
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 34/127 (26%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK----QMVMLRN---- 232
Y +PE+L + T YG VDVWA G + LL G P W K Q+ ++R
Sbjct: 168 YRSPELLVGD-----TQYGPPVDVWAIGCVFAELLSGV-PLWPGKSDVDQLYLIRKTLGD 221
Query: 233 -IMEGKYSFSSPEWNDISE--DPKD-----------------LIRKLLIVTPEDRYSVKE 272
I + FS+ ++ + DP+D L++ L + P +R + ++
Sbjct: 222 LIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQ 281
Query: 273 ALNHSFF 279
L+H +F
Sbjct: 282 LLHHPYF 288
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+ +L AL + H+ V+HRD+KPEN+LL +K+ DFG++ + L GT Y
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLSGTLDY 173
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
L PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 174 LPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W+ GV+ Y LVG PPF + I +++F
Sbjct: 173 YLPPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
P++ ++E +DLI +LL P R ++E L H
Sbjct: 227 --PDF--VTEGARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 53/257 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIK--KDYKTASRKL 302
EP+ +D SR L
Sbjct: 316 DEPVADPRDQSFESRDL 332
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 189
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 190 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 242
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 243 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 285
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 286 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 320
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 321 DEPVADPY 328
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 16/136 (11%)
Query: 12 VVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRD 71
+V+ E GD K + AQ KG +D I L + + Q+ AL+HVH+ ++HRD
Sbjct: 100 IVMDYCEGGDLFKRINAQ---KGVLFQEDQI-----LDWFV-QICLALKHVHDRKILHRD 150
Query: 72 LKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC-GTPGYLAPEVLRANMFEDATGYGQ 130
+K +NI L V+L DFG ARVL +L C GTP YL+PE+ + Y
Sbjct: 151 IKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC------ENKPYNN 204
Query: 131 AVDVWACGVIMYTLLV 146
D+WA G ++Y L
Sbjct: 205 KSDIWALGCVLYELCT 220
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL+PE+ + Y D+WA G ++Y L F ++ I+ G +
Sbjct: 191 YLSPEIC------ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP 244
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
S + S D + L+ +L P DR SV L F ++
Sbjct: 245 VSLHY---SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 124 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 181
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 182 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 234
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 235 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 277
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 278 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 312
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 313 DEPVADPY 320
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 180
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 181 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 233
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 234 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 276
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 277 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 311
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 312 DEPVADPY 319
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKL 102
+ P ++ + RQ+ EAL +H+ ++HRDLK N+L+ + +++L DFG A+ LK +K
Sbjct: 115 TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 174
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
GTP ++APEV+ +D T Y D+W+ G+ + + PP M +L
Sbjct: 175 DSFIGTPYWMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 233
Query: 163 I 163
I
Sbjct: 234 I 234
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK--Y 238
++APEV+ +D T Y D+W+ G+ + + PP M +L I +
Sbjct: 183 WMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPT 241
Query: 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSF 278
+ +W S + +D ++ L PE R S + L H F
Sbjct: 242 LLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPF 278
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 124 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 181
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 182 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 234
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 235 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 277
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 278 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 312
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 313 DEPVADPY 320
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 180
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 181 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 233
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 234 ----------LVGTPGAELLKKISSESARNYIQSL-AQMPKMNFANVFIGANPL------ 276
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 277 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 311
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 312 DEPVADPY 319
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 180
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 181 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 233
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 234 ----------LVGTPGAELLKKISSESARNYIQSL-AQMPKMNFANVFIGANPL------ 276
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 277 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 311
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 312 DEPVADPY 319
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 53/257 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIK--KDYKTASRKL 302
EP+ +D SR L
Sbjct: 316 DEPVADPQDQSFESRDL 332
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKL 102
+ P ++ + RQ+ EAL +H+ ++HRDLK N+L+ + +++L DFG A+ LK +K
Sbjct: 107 TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 166
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
GTP ++APEV+ +D T Y D+W+ G+ + + PP M +L
Sbjct: 167 DSFIGTPYWMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 225
Query: 163 I 163
I
Sbjct: 226 I 226
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK--Y 238
++APEV+ +D T Y D+W+ G+ + + PP M +L I +
Sbjct: 175 WMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPT 233
Query: 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSF 278
+ +W S + +D ++ L PE R S + L H F
Sbjct: 234 LLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPF 270
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 91/235 (38%), Gaps = 55/235 (23%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC 106
++ +M QL L+ +H+H VVHRDLKP+NIL+ +KL DFG AR+ L +
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
T Y APEVL + Y VD+W+ G I
Sbjct: 181 VTLWYRAPEVLL------QSSYATPVDLWSVGCIF------------------------- 209
Query: 167 KYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQ 226
A MF + + DV G I+ + + W R
Sbjct: 210 ----------------------AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR-D 246
Query: 227 MVMLRNIMEGKYSFSSPEW-NDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ + R K + ++ DI E KDL+ K L P R S AL+H +F
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 76/140 (54%), Gaps = 19/140 (13%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
S+ ++Y + Q A++ +H +V+HRDLKP N+L++ ++K+ DFG AR++ +
Sbjct: 110 SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 102 ---------LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152
+++ T Y APEV+ + Y +A+DVW+CG I+ L + P F
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 153 ---HRKQMVMLRNIMEGKYS 169
+R Q++++ I+ +S
Sbjct: 225 GRDYRHQLLLIFGIIGTPHS 244
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 38/143 (26%)
Query: 166 GKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW--- 222
G F + W Y APEV+ + Y +A+DVW+CG I+ L + P F
Sbjct: 178 GMVEFVATRW-----YRAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227
Query: 223 HRKQMVMLRNIMEGKYS------FSSPEWNDISE-----------------DPK--DLIR 257
+R Q++++ I+ +S SP + + +PK DL++
Sbjct: 228 YRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQ 287
Query: 258 KLLIVTPEDRYSVKEALNHSFFH 280
++L+ P R + KEAL H +
Sbjct: 288 RMLVFDPAKRITAKEALEHPYLQ 310
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 53/257 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIK--KDYKTASRKL 302
EP+ D SR L
Sbjct: 316 DEPVADPTDQSFESRDL 332
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ D+G AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 51/244 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPI 291
EP+
Sbjct: 316 DEPV 319
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG R +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
IM +L +AL + H V+HRD+KPEN+LL + +K+ DFG++ V + +CGT
Sbjct: 128 IMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTMCGTLD 186
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
YL PE++ M + + VD+W GV+ Y LLVG PPF R I++ F
Sbjct: 187 YLPPEMIEGRM------HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKF 240
Query: 171 SS 172
+
Sbjct: 241 PA 242
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
YL PE++ M + + VD+W GV+ Y LLVG PPF R I++ F
Sbjct: 187 YLPPEMIEGRM------HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKF 240
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
+ + +DLI KLL P +R + + H
Sbjct: 241 PA----SVPTGAQDLISKLLRHNPSERLPLAQVSAH 272
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
Query: 55 LFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTPGYLA 113
+ +AL +H V+HRD+K ++ILL VKL+DFGF A+V K+ + L GTP ++A
Sbjct: 256 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 315
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRN 162
PE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+
Sbjct: 316 PELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 361
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRNIMEGK 237
++APE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+ + +
Sbjct: 313 WMAPELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 366
Query: 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKT 297
+ +S K + +LL+ P R + E L H F I P+ + +T
Sbjct: 367 LK----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRT 422
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 63/254 (24%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ + L ++H ++HRDLKP N+ +++ +K+ DFG AR + ++
Sbjct: 130 IQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVV 187
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APEV+ M Y Q VD+W+ G IM ++ G F + L+ IM+
Sbjct: 188 TRWYRAPEVILNWM-----RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK-- 240
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP--FWHRK 225
+ G PP F R
Sbjct: 241 -----------------------------------------------VTGTPPAEFVQRL 253
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPK----DLIRKLLIVTPEDRYSVKEALNHSFFHP 281
Q +N M+G ++ I + +L+ K+L++ E R + EAL H +F
Sbjct: 254 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE- 312
Query: 282 KLFDQDIEPIKKDY 295
L D + EP + Y
Sbjct: 313 SLHDTEDEPQVQKY 326
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 19/140 (13%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
S+ ++Y + Q A++ +H +V+HRDLKP N+L++ ++K+ DFG AR++ +
Sbjct: 110 SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 102 ---------LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152
+ + T Y APEV+ + Y +A+DVW+CG I+ L + P F
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 153 ---HRKQMVMLRNIMEGKYS 169
+R Q++++ I+ +S
Sbjct: 225 GRDYRHQLLLIFGIIGTPHS 244
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 33/128 (25%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIMEGK 237
Y APEV+ + Y +A+DVW+CG I+ L + P F +R Q++++ I+
Sbjct: 188 YRAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242
Query: 238 YS------FSSPEWNDISE-----------------DPK--DLIRKLLIVTPEDRYSVKE 272
+S SP + + +PK DL++++L+ P R + KE
Sbjct: 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKE 302
Query: 273 ALNHSFFH 280
AL H +
Sbjct: 303 ALEHPYLQ 310
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 19/140 (13%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK-- 101
S+ ++Y + Q A++ +H +V+HRDLKP N+L++ ++K+ DFG AR++ +
Sbjct: 110 SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 102 ---------LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152
+ + T Y APEV+ + Y +A+DVW+CG I+ L + P F
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 153 ---HRKQMVMLRNIMEGKYS 169
+R Q++++ I+ +S
Sbjct: 225 GRDYRHQLLLIFGIIGTPHS 244
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 33/128 (25%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIMEGK 237
Y APEV+ + Y +A+DVW+CG I+ L + P F +R Q++++ I+
Sbjct: 188 YRAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242
Query: 238 YS------FSSPEWNDISE-----------------DPK--DLIRKLLIVTPEDRYSVKE 272
+S SP + + +PK DL++++L+ P R + KE
Sbjct: 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKE 302
Query: 273 ALNHSFFH 280
AL H +
Sbjct: 303 ALEHPYLQ 310
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 92 EEFQDV-YLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 150
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 151 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 204
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 205 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 235
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISED------ 251
CP F + Q +RN +E + ++ + + D
Sbjct: 236 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 276
Query: 252 ----------PKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 277 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 212 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 242
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISED------ 251
CP F + Q +RN +E + ++ + + D
Sbjct: 243 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 283
Query: 252 ----------PKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 284 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCGTPGYLAPEV 116
L + + +++RDLK +N++LD + ++K+ DFG + + G CGTP Y+APE+
Sbjct: 133 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 192
Query: 117 LRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
+ YG++VD WA GV++Y +L G PF + + ++IME ++
Sbjct: 193 IAYQ------PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE++ YG++VD WA GV++Y +L G PF + + ++IME ++
Sbjct: 187 YIAPEIIAYQ------PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 241 SSPEWNDISEDPKDLIR----KLLIVTPEDRYSVKEALNHSFFH----PKLFDQDIEP 290
+ K L+ K L PE +KE H+FF KL ++I+P
Sbjct: 241 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE---HAFFRYIDWEKLERKEIQP 295
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 106/257 (41%), Gaps = 57/257 (22%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK------- 101
+Y++ QL + ++++H+ ++HRD+KP NILL+ + +VK+ DFG +R +
Sbjct: 112 QYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPL 171
Query: 102 ---------------LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
L D T Y APE+L +T Y + +D+W+ G I+ +L
Sbjct: 172 SINENTENFDDDQPILTDYVATRWYRAPEILLG-----STKYTKGIDMWSLGCILGEILC 226
Query: 147 GCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWA 206
G P F M L I+ G F S E D+ +P M E + V++
Sbjct: 227 GKPIFPGSSTMNQLERII-GVIDFPSNE--DVESIQSP--FAKTMIE---SLKEKVEIRQ 278
Query: 207 CGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPED 266
R +N++ D +E+ DL+ KLL P
Sbjct: 279 SN--------------KRDIFTKWKNLL-----LKINPKADCNEEALDLLDKLLQFNPNK 319
Query: 267 RYSVKEALNHSF---FH 280
R S +AL H F FH
Sbjct: 320 RISANDALKHPFVSIFH 336
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 212 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 242
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDP----- 252
CP F + Q +RN +E + ++ + + D
Sbjct: 243 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 283
Query: 253 -----------KDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 284 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 27/148 (18%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ + ++++H S++HRDLK NI L + + VK+ DFG A V + + L G
Sbjct: 136 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 195
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIM 164
+ ++APEV+R +D Y DV+A G+++Y L+ G P+ +R Q++ M
Sbjct: 196 SILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII----FM 248
Query: 165 EGKYSFSSPEWNDISGYLAPEV--LRAN 190
G+ GYL+P++ +R+N
Sbjct: 249 VGR------------GYLSPDLSKVRSN 264
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D Y DV+A G+++Y L+ G P+ +R
Sbjct: 187 SHQFEQLSGSILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 243
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ + SP+ + + + +++L+
Sbjct: 244 QII----FMVGR-GYLSPDLSKVRSNCPKAMKRLM 273
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
Query: 55 LFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTPGYLA 113
+ +AL +H V+HRD+K ++ILL VKL+DFGF A+V K+ + L GTP ++A
Sbjct: 136 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 195
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRN 162
PE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+
Sbjct: 196 PELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 241
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRNIMEGK 237
++APE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+ + +
Sbjct: 193 WMAPELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 246
Query: 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKT 297
+ +S K + +LL+ P R + E L H F I P+ + +T
Sbjct: 247 LK----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRT 302
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
Query: 55 LFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTPGYLA 113
+ +AL +H V+HRD+K ++ILL VKL+DFGF A+V K+ + L GTP ++A
Sbjct: 179 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 238
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRN 162
PE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+
Sbjct: 239 PELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 284
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRNIMEGK 237
++APE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+ + +
Sbjct: 236 WMAPELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 289
Query: 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKT 297
+ +S K + +LL+ P R + E L H F I P+ + +T
Sbjct: 290 LK----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRT 345
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 27/148 (18%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ + ++++H S++HRDLK NI L + + VK+ DFG A V + + L G
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 196
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIM 164
+ ++APEV+R +D Y DV+A G+++Y L+ G P+ +R Q++ M
Sbjct: 197 SILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII----FM 249
Query: 165 EGKYSFSSPEWNDISGYLAPEV--LRAN 190
G+ GYL+P++ +R+N
Sbjct: 250 VGR------------GYLSPDLSKVRSN 265
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D Y DV+A G+++Y L+ G P+ +R
Sbjct: 188 SHQFEQLSGSILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 244
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ + SP+ + + + +++L+
Sbjct: 245 QII----FMVGR-GYLSPDLSKVRSNCPKAMKRLM 274
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-LKKGEKLMDLCGTPGYLAPEV 116
L + + +++RDLK +N++LD + ++K+ DFG + + G CGTP Y+APE+
Sbjct: 454 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 513
Query: 117 LRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
+ YG++VD WA GV++Y +L G PF + + ++IME ++
Sbjct: 514 IAYQ------PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y+APE++ YG++VD WA GV++Y +L G PF + + ++IME ++
Sbjct: 508 YIAPEIIAYQ------PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 241 SSPEWNDISEDPKDLIR----KLLIVTPEDRYSVKEALNHSFFH----PKLFDQDIEP 290
+ K L+ K L PE +KE H+FF KL ++I+P
Sbjct: 562 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE---HAFFRYIDWEKLERKEIQP 616
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 101 EEFQDV-YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 159
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR ++ T Y APEV+ GY + VD+W+
Sbjct: 160 VVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVIL------GMGYKENVDIWSV 213
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM ++ G G L P
Sbjct: 214 GCIMGEMIKG--------------------------------GVLFPGT----------- 230
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK-----YSF----------SS 242
+D W ++ L CP F + Q +R +E + YSF +
Sbjct: 231 --DHIDQW--NKVIEQLGTPCPEFMKKLQPT-VRTYVENRPKYAGYSFEKLFPDVLFPAD 285
Query: 243 PEWNDI-SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
E N + + +DL+ K+L++ R SV EAL H + +
Sbjct: 286 SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 324
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
Query: 55 LFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTPGYLA 113
+ +AL +H V+HRD+K ++ILL VKL+DFGF A+V K+ + L GTP ++A
Sbjct: 134 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 193
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRN 162
PE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+
Sbjct: 194 PELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 239
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRNIMEGK 237
++APE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+ + +
Sbjct: 191 WMAPELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 244
Query: 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKT 297
+ +S K + +LL+ P R + E L H F I P+ + +T
Sbjct: 245 LK----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRT 300
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 27/148 (18%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ + ++++H S++HRDLK NI L + + VK+ DFG A V + + L G
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIM 164
+ ++APEV+R +D Y DV+A G+++Y L+ G P+ +R Q++ M
Sbjct: 174 SILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----M 226
Query: 165 EGKYSFSSPEWNDISGYLAPEV--LRAN 190
G+ GYL+P++ +R+N
Sbjct: 227 VGR------------GYLSPDLSKVRSN 242
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D Y DV+A G+++Y L+ G P+ +R
Sbjct: 165 SHQFEQLSGSILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ + SP+ + + + +++L+
Sbjct: 222 QIIF----MVGR-GYLSPDLSKVRSNCPKAMKRLM 251
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 27/148 (18%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ + ++++H S++HRDLK NI L + + VK+ DFG A V + + L G
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIM 164
+ ++APEV+R +D Y DV+A G+++Y L+ G P+ +R Q++ M
Sbjct: 174 SILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----M 226
Query: 165 EGKYSFSSPEWNDISGYLAPEV--LRAN 190
G+ GYL+P++ +R+N
Sbjct: 227 VGR------------GYLSPDLSKVRSN 242
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D Y DV+A G+++Y L+ G P+ +R
Sbjct: 165 SHQFEQLSGSILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ + SP+ + + + +++L+
Sbjct: 222 QIIF----MVGR-GYLSPDLSKVRSNCPKAMKRLM 251
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 92 EEFQDV-YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 150
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 151 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 204
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 205 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 235
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISED------ 251
CP F + Q +RN +E + ++ + + D
Sbjct: 236 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 276
Query: 252 ----------PKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 277 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 93 EEFQDV-YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 152 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 205
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 206 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 236
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISED------ 251
CP F + Q +RN +E + ++ + + D
Sbjct: 237 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 277
Query: 252 ----------PKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 278 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 27/148 (18%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ + ++++H S++HRDLK NI L + + VK+ DFG A V + + L G
Sbjct: 111 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 170
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIM 164
+ ++APEV+R +D Y DV+A G+++Y L+ G P+ +R Q++ M
Sbjct: 171 SILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF----M 223
Query: 165 EGKYSFSSPEWNDISGYLAPEV--LRAN 190
G+ GYL+P++ +R+N
Sbjct: 224 VGR------------GYLSPDLSKVRSN 239
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D Y DV+A G+++Y L+ G P+ +R
Sbjct: 162 SHQFEQLSGSILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 218
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ + SP+ + + + +++L+
Sbjct: 219 QIIF----MVGR-GYLSPDLSKVRSNCPKAMKRLM 248
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 93 EEFQDV-YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 152 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 205
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 206 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 236
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISED------ 251
CP F + Q +RN +E + ++ + + D
Sbjct: 237 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 277
Query: 252 ----------PKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 278 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 112/279 (40%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 137 EEFQDV-YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 195
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 196 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 249
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+
Sbjct: 250 GCIM-------------GEMVRHKILFPGR------------------------------ 266
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISED------ 251
+D W ++ L CP F + Q +RN +E + ++ + + D
Sbjct: 267 --DYIDQW--NKVIEQLGTPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 321
Query: 252 ----------PKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 322 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 100 EEFQDV-YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 212
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 213 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 243
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDP----- 252
CP F + Q +RN +E + ++ + + D
Sbjct: 244 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 284
Query: 253 -----------KDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 285 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 212 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 242
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDP----- 252
CP F + Q +RN +E + ++ + + D
Sbjct: 243 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 283
Query: 253 -----------KDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 284 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
Query: 55 LFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTPGYLA 113
+ +AL +H V+HRD+K ++ILL VKL+DFGF A+V K+ + L GTP ++A
Sbjct: 125 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 184
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRN 162
PE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+
Sbjct: 185 PELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 230
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRNIMEGK 237
++APE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+ + +
Sbjct: 182 WMAPELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 235
Query: 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKT 297
+ +S K + +LL+ P R + E L H F I P+ + +T
Sbjct: 236 LK----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRT 291
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query: 36 AAVQDIIN----SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFG 91
A+ DI++ + + + + +AL ++H V+HRD+K ++ILL VKL+DFG
Sbjct: 127 GALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFG 186
Query: 92 F-ARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 150
F A++ K K L GTP ++APEV+ ++ Y VD+W+ G+++ ++ G PP
Sbjct: 187 FCAQISKDVPKRKXLVGTPYWMAPEVISRSL------YATEVDIWSLGIMVIEMVDGEPP 240
Query: 151 FW 152
++
Sbjct: 241 YF 242
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220
+++ + K +P W +APEV+ ++ Y VD+W+ G+++ ++ G PP
Sbjct: 193 KDVPKRKXLVGTPYW------MAPEVISRSL------YATEVDIWSLGIMVIEMVDGEPP 240
Query: 221 FWHR---KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHS 277
++ + M LR+ K S + +S +D + ++L+ P++R + +E L+H
Sbjct: 241 YFSDSPVQAMKRLRDSPPPKLKNS----HKVSPVLRDFLERMLVRDPQERATAQELLDHP 296
Query: 278 FFHPKLFDQDIEPIKKDYKTAS 299
F + + P+ + Y+ +
Sbjct: 297 FLLQTGLPECLVPLIQLYRKQT 318
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 212 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 242
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISED------ 251
CP F + Q +RN +E + ++ + + D
Sbjct: 243 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 283
Query: 252 ----------PKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 284 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 212 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 242
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISED------ 251
CP F + Q +RN +E + ++ + + D
Sbjct: 243 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 283
Query: 252 ----------PKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 284 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 100 EEFQDV-YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 212
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 213 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 243
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDP----- 252
CP F + Q +RN +E + ++ + + D
Sbjct: 244 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 284
Query: 253 -----------KDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 285 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
Query: 55 LFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLCGTPGYLA 113
+ +AL +H V+HRD+K ++ILL VKL+DFGF A+V K+ + L GTP ++A
Sbjct: 129 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 188
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRN 162
PE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+
Sbjct: 189 PELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD 234
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR---KQMVMLRNIMEGK 237
++APE++ YG VD+W+ G+++ ++ G PP+++ K M M+R+ + +
Sbjct: 186 WMAPELI------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 239
Query: 238 YSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQDIEPIKKDYKT 297
+ +S K + +LL+ P R + E L H F I P+ + +T
Sbjct: 240 LK----NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRT 295
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 113/279 (40%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 137 EEFQDV-YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 195
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 196 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 249
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+
Sbjct: 250 GCIM-------------GEMVRHKILFPGR------------------------------ 266
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF---------------SS 242
+D W ++ L CP F + Q +RN +E + + +
Sbjct: 267 --DYIDQW--NKVIEQLGTPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 321
Query: 243 PEWNDI-SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
E N + + +DL+ K+L++ P R SV +AL H + +
Sbjct: 322 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 98 EEFQDV-YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 156
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 157 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 210
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 211 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 241
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISED------ 251
CP F + Q +RN +E + ++ + + D
Sbjct: 242 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 282
Query: 252 ----------PKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 283 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ FG AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ + ++++H S++HRDLK NI L + + VK+ DFG A V + + L G
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ ++APEV+R +D Y DV+A G+++Y L+ G P+
Sbjct: 169 SILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D Y DV+A G+++Y L+ G P+ +R
Sbjct: 160 SHQFEQLSGSILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ + SP+ + + + +++L+
Sbjct: 217 QIIF----MVGR-GYLSPDLSKVRSNCPKAMKRLM 246
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ + ++++H S++HRDLK NI L + + VK+ DFG A V + + L G
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ ++APEV+R +D Y DV+A G+++Y L+ G P+
Sbjct: 169 SILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D Y DV+A G+++Y L+ G P+ +R
Sbjct: 160 SHQFEQLSGSILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ + SP+ + + + +++L+
Sbjct: 217 QIIF----MVGR-GYLSPDLSKVRSNCPKAMKRLM 246
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 22/111 (19%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLK------ 97
+ RQ+ EAL ++H+ ++HRDLKP NI +D+ NVK+ DFG A+ +LK
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 98 --KGEKLMDLCGTPGYLAPEVLRANMFEDATG-YGQAVDVWACGVIMYTLL 145
+ L GT Y+A EVL D TG Y + +D+++ G+I + ++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVL------DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 22/111 (19%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLK------ 97
+ RQ+ EAL ++H+ ++HRDLKP NI +D+ NVK+ DFG A+ +LK
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 98 --KGEKLMDLCGTPGYLAPEVLRANMFEDATG-YGQAVDVWACGVIMYTLL 145
+ L GT Y+A EVL D TG Y + +D+++ G+I + ++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVL------DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ +L +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 212 GCIM-------------GEMVRHKILFPGRDYID--QWNKVIEQLG-------------- 242
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDP----- 252
CP F + Q +RN +E + ++ + + D
Sbjct: 243 ------------------TPCPEFMKKLQPT-VRNYVENRPKYAGLTFPKLFPDSLFPAD 283
Query: 253 -----------KDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+DL+ K+L++ P R SV +AL H + +
Sbjct: 284 SEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ D G AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DF AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Query: 21 DDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80
D +KH+ A KGE + S A I+R++ E LE++H + +HRD+K NILL
Sbjct: 102 DIIKHIVA----KGEHKSGVLDESTIAT--ILREVLEGLEYLHKNGQIHRDVKAGNILLG 155
Query: 81 DQMNVKLTDFGFARVLKKGEKLM------DLCGTPGYLAPEVLRANMFEDATGYGQAVDV 134
+ +V++ DFG + L G + GTP ++APEV+ E GY D+
Sbjct: 156 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM-----EQVRGYDFKADI 210
Query: 135 WACGVIMYTLLVGCPPF 151
W+ G+ L G P+
Sbjct: 211 WSFGITAIELATGAAPY 227
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 21/111 (18%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
++APEV+ E GY D+W+ G+ L G P+ M +L ++
Sbjct: 192 WMAPEVM-----EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ----- 241
Query: 241 SSPEWNDISEDPKDLIRK-----------LLIVTPEDRYSVKEALNHSFFH 280
+ P + K++++K L PE R + E L H FF
Sbjct: 242 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 34 GEAAVQDIINSNP----ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTD 89
G + D++ P + I+R++ + L+++H+ +HRD+K N+LL + VKL D
Sbjct: 88 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLAD 147
Query: 90 FGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
FG A L + K GTP ++APEV++ + Y D+W+ G+ L G
Sbjct: 148 FGVAGQLTDTQIKRNTFVGTPFWMAPEVIK------QSAYDSKADIWSLGITAIELARGE 201
Query: 149 PPFWHRKQMVMLRNI-------MEGKYS 169
PP M +L I +EG YS
Sbjct: 202 PPHSELHPMKVLFLIPKNNPPTLEGNYS 229
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 34 GEAAVQDIINSNP----ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTD 89
G + D++ P + I+R++ + L+++H+ +HRD+K N+LL + VKL D
Sbjct: 108 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLAD 167
Query: 90 FGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
FG A L + K GTP ++APEV++ + Y D+W+ G+ L G
Sbjct: 168 FGVAGQLTDTQIKRNTFVGTPFWMAPEVIK------QSAYDSKADIWSLGITAIELARGE 221
Query: 149 PPFWHRKQMVMLRNI-------MEGKYS 169
PP M +L I +EG YS
Sbjct: 222 PPHSELHPMKVLFLIPKNNPPTLEGNYS 249
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Query: 21 DDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLD 80
D +KH+ A KGE + S A I+R++ E LE++H + +HRD+K NILL
Sbjct: 97 DIIKHIVA----KGEHKSGVLDESTIAT--ILREVLEGLEYLHKNGQIHRDVKAGNILLG 150
Query: 81 DQMNVKLTDFGFARVLKKGEKLM------DLCGTPGYLAPEVLRANMFEDATGYGQAVDV 134
+ +V++ DFG + L G + GTP ++APEV+ E GY D+
Sbjct: 151 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM-----EQVRGYDFKADI 205
Query: 135 WACGVIMYTLLVGCPPF 151
W+ G+ L G P+
Sbjct: 206 WSFGITAIELATGAAPY 222
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 21/111 (18%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
++APEV+ E GY D+W+ G+ L G P+ M +L ++
Sbjct: 187 WMAPEVM-----EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ----- 236
Query: 241 SSPEWNDISEDPKDLIRK-----------LLIVTPEDRYSVKEALNHSFFH 280
+ P + K++++K L PE R + E L H FF
Sbjct: 237 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ D G AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ ++++H S++HRDLK NI L + VK+ DFG A V + + L G
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG 172
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ ++APEV+R +D+ Y DV+A G+++Y L+ G P+
Sbjct: 173 SILWMAPEVIR---MQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D+ Y DV+A G+++Y L+ G P+ +R
Sbjct: 164 SHQFEQLSGSILWMAPEVIR---MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 220
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ S SP+ + + + +++L+
Sbjct: 221 QIIE----MVGRGSL-SPDLSKVRSNCPKRMKRLM 250
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 100 EEFQDV-YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 212
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM ++ G G L P
Sbjct: 213 GCIMGEMIKG--------------------------------GVLFPGT----------- 229
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK-----YSF----------SS 242
+D W ++ L CP F + Q +R +E + YSF +
Sbjct: 230 --DHIDQW--NKVIEQLGTPCPEFMKKLQPT-VRTYVENRPKYAGYSFEKLFPDVLFPAD 284
Query: 243 PEWNDI-SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
E N + + +DL+ K+L++ R SV EAL H + +
Sbjct: 285 SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 212 GCIM-------------GEMVCHKILFPGRDYID--QWNKVIEQLG-------------- 242
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK-----YSF----------SS 242
CP F + Q +RN +E + YSF +
Sbjct: 243 ------------------TPCPAFMKKLQPT-VRNYVENRPKYAGYSFEKLFPDVLFPAD 283
Query: 243 PEWNDI-SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
E N + + +DL+ K+L++ R SV EAL H + +
Sbjct: 284 SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 51/248 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ D G AR +++
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGYVA 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK 167
T Y APE++ M Y Q VD+W+ G IM LL G F + L+ I+
Sbjct: 185 TRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR-- 237
Query: 168 YSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 227
+ G E+L+ E A Y Q++ + + +G P
Sbjct: 238 ----------LVGTPGAELLKKISSESARNYIQSL-TQMPKMNFANVFIGANPL------ 280
Query: 228 VMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQD 287
DL+ K+L++ + R + +AL H++F + D D
Sbjct: 281 ------------------------AVDLLEKMLVLDSDKRITAAQALAHAYF-AQYHDPD 315
Query: 288 IEPIKKDY 295
EP+ Y
Sbjct: 316 DEPVADPY 323
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM ++ G G L P
Sbjct: 212 GCIMGEMIKG--------------------------------GVLFPGT----------- 228
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK-----YSF----------SS 242
+D W ++ L CP F + Q +R +E + YSF +
Sbjct: 229 --DHIDQW--NKVIEQLGTPCPEFMKKLQPT-VRTYVENRPKYAGYSFEKLFPDVLFPAD 283
Query: 243 PEWNDI-SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
E N + + +DL+ K+L++ R SV EAL H + +
Sbjct: 284 SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 34 GEAAVQDIINSNP----ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTD 89
G + D++ P + I+R++ + L+++H+ +HRD+K N+LL + VKL D
Sbjct: 103 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLAD 162
Query: 90 FGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
FG A L + K GTP ++APEV++ + Y D+W+ G+ L G
Sbjct: 163 FGVAGQLTDTQIKRNXFVGTPFWMAPEVIK------QSAYDSKADIWSLGITAIELARGE 216
Query: 149 PPFWHRKQMVMLRNI-------MEGKYS 169
PP M +L I +EG YS
Sbjct: 217 PPHSELHPMKVLFLIPKNNPPTLEGNYS 244
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 34 GEAAVQDIINSNP----ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTD 89
G + D++ P + I+R++ + L+++H+ +HRD+K N+LL + VKL D
Sbjct: 88 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLAD 147
Query: 90 FGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
FG A L + K GTP ++APEV++ + Y D+W+ G+ L G
Sbjct: 148 FGVAGQLTDTQIKRNXFVGTPFWMAPEVIK------QSAYDSKADIWSLGITAIELARGE 201
Query: 149 PPFWHRKQMVMLRNI-------MEGKYS 169
PP M +L I +EG YS
Sbjct: 202 PPHSELHPMKVLFLIPKNNPPTLEGNYS 229
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 114/271 (42%), Gaps = 59/271 (21%)
Query: 30 VVDKGEAAVQDIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN 84
V+D E+ + II+S+ L RY + QL L+++H+ V+HRDLKP N+L+++
Sbjct: 138 VLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE 197
Query: 85 VKLTDFGFARVLKKGEK-----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGV 139
+K+ DFG AR L + + T Y APE++ ++ E Y QA+D+W+ G
Sbjct: 198 LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM-LSLHE----YTQAIDLWSVGC 252
Query: 140 IMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYG 199
I +L F + + L+ IM + G +P V++A E Y
Sbjct: 253 IFGEMLARRQLFPGKNYVHQLQLIMM------------VLGTPSPAVIQAVGAERVRAYI 300
Query: 200 QAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKL 259
Q++ PP +Q V + G L+ ++
Sbjct: 301 QSL----------------PP----RQPVPWETVYPGA-----------DRQALSLLGRM 329
Query: 260 LIVTPEDRYSVKEALNHSFFHPKLFDQDIEP 290
L P R S AL H F K D D EP
Sbjct: 330 LRFEPSARISAAAALRHPFLA-KYHDPDDEP 359
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 114/271 (42%), Gaps = 59/271 (21%)
Query: 30 VVDKGEAAVQDIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN 84
V+D E+ + II+S+ L RY + QL L+++H+ V+HRDLKP N+L+++
Sbjct: 137 VLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE 196
Query: 85 VKLTDFGFARVLKKGEK-----LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGV 139
+K+ DFG AR L + + T Y APE++ ++ E Y QA+D+W+ G
Sbjct: 197 LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM-LSLHE----YTQAIDLWSVGC 251
Query: 140 IMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYG 199
I +L F + + L+ IM + G +P V++A E Y
Sbjct: 252 IFGEMLARRQLFPGKNYVHQLQLIMM------------VLGTPSPAVIQAVGAERVRAYI 299
Query: 200 QAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKL 259
Q++ PP +Q V + G L+ ++
Sbjct: 300 QSL----------------PP----RQPVPWETVYPGA-----------DRQALSLLGRM 328
Query: 260 LIVTPEDRYSVKEALNHSFFHPKLFDQDIEP 290
L P R S AL H F K D D EP
Sbjct: 329 LRFEPSARISAAAALRHPFL-AKYHDPDDEP 358
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D + V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVG 147
GVIM ++ G
Sbjct: 212 GVIMGEMIKG 221
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 44/138 (31%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL---------------------VGCP 219
Y APEV+ GY + VD+W+ GVIM ++ +G P
Sbjct: 191 YRAPEVILG------MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 220 -PFWHRKQMVMLRNIMEGK-----YSF----------SSPEWNDI-SEDPKDLIRKLLIV 262
P + +K +R +E + YSF + E N + + +DL+ K+L++
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 263 TPEDRYSVKEALNHSFFH 280
R SV EAL H + +
Sbjct: 305 DASKRISVDEALQHPYIN 322
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 99 DFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSG 158
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 159 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 212
Query: 154 RKQMV 158
++++
Sbjct: 213 DEEII 217
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 104 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 163
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 164 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 217
Query: 154 RKQMV 158
++++
Sbjct: 218 DEEII 222
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D + V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVG 147
GVIM ++ G
Sbjct: 212 GVIMGEMIKG 221
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 44/138 (31%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL---------------------VGCP 219
Y APEV+ GY + VD+W+ GVIM ++ +G P
Sbjct: 191 YRAPEVILG------MGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 220 -PFWHRKQMVMLRNIMEGK-----YSF----------SSPEWNDI-SEDPKDLIRKLLIV 262
P + +K +R +E + YSF + E N + + +DL+ K+L++
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 263 TPEDRYSVKEALNHSFFH 280
R SV EAL H + +
Sbjct: 305 DASKRISVDEALQHPYIN 322
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 103 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 162
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 163 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 216
Query: 154 RKQMV 158
++++
Sbjct: 217 DEEII 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 11/122 (9%)
Query: 34 GEAAVQDIINSNPA----LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTD 89
G + D++ P + I+R++ + L+++H+ +HRD+K N+LL +Q +VKL D
Sbjct: 100 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLAD 159
Query: 90 FGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
FG A L + K GTP ++APEV++ + Y D+W+ G+ L G
Sbjct: 160 FGVAGQLTDTQIKRNXFVGTPFWMAPEVIK------QSAYDFKADIWSLGITAIELAKGE 213
Query: 149 PP 150
PP
Sbjct: 214 PP 215
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 103 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 162
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 163 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 216
Query: 154 RKQMV 158
++++
Sbjct: 217 DEEII 221
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 104 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 163
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 164 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 217
Query: 154 RKQMV 158
++++
Sbjct: 218 DEEII 222
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 104 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 163
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 164 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 217
Query: 154 RKQMV 158
++++
Sbjct: 218 DEEII 222
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 36 AAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN--VKLTDFGFA 93
A + ++ + A+ Y MRQ+ + L H+H ++ VH DLKPENI+ + + +KL DFG
Sbjct: 140 ADEHNKMSEDEAVEY-MRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
L + + GT + APEV + G D+W+ GV+ Y LL G PF
Sbjct: 199 AHLDPKQSVKVTTGTAEFAAPEVA------EGKPVGYYTDMWSVGVLSYILLSGLSPFGG 252
Query: 154 RKQMVMLRNIMEGKYSFSSPEWNDIS 179
LRN+ ++ ++ IS
Sbjct: 253 ENDDETLRNVKSCDWNMDDSAFSGIS 278
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
+ APEV + G D+W+ GV+ Y LL G PF LRN+ ++
Sbjct: 216 FAAPEVA------EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 269
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
++ ISED KD IRKLL+ P R ++ +AL H + P
Sbjct: 270 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 310
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILL----DDQMNVKLTDFGFARVLKKGEKLMDLC 106
++R + + H+ + +VHR++KP NI+ D Q KLTDFG AR L+ E+ + L
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY 176
Query: 107 GTPGYLAPEVL-RANMFED-ATGYGQAVDVWACGVIMYTLLVGCPPF----WHRKQMVML 160
GT YL P++ RA + +D YG VD+W+ GV Y G PF R+ ++
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236
Query: 161 RNIMEGKYS 169
I+ GK S
Sbjct: 237 YKIITGKPS 245
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Query: 178 ISGYLAPEVLRANMFEDAT-------GYGQAVDVWACGVIMYTLLVGCPPF----WHRKQ 226
+S Y E L +M+E A YG VD+W+ GV Y G PF R+
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232
Query: 227 MVMLRNIMEGKYS 239
++ I+ GK S
Sbjct: 233 KEVMYKIITGKPS 245
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Query: 9 HSRVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRY-------IMRQLFEALEH 61
H V+ V ++ K V++ +Q++++S P R+ QL + LE+
Sbjct: 65 HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124
Query: 62 VHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC----GTPGYLAPEVL 117
+H+ +VH+D+KP N+LL +K++ G A L D C G+P + PE+
Sbjct: 125 LHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA-DDTCRTSQGSPAFQPPEI- 182
Query: 118 RANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 170
AN + +G+ VD+W+ GV +Y + G PF + NI +G Y+
Sbjct: 183 -ANGLDTFSGF--KVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI 232
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 102 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 161
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 162 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 215
Query: 154 RKQMV 158
++++
Sbjct: 216 DEEII 220
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 11/122 (9%)
Query: 34 GEAAVQDIINSNP----ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTD 89
G + D++ + P + +++++ + L+++H+ +HRD+K N+LL +Q +VKL D
Sbjct: 104 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLAD 163
Query: 90 FGFARVLKKGE-KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
FG A L + K GTP ++APEV++ + Y D+W+ G+ L G
Sbjct: 164 FGVAGQLTDTQIKRNTFVGTPFWMAPEVIQ------QSAYDSKADIWSLGITAIELAKGE 217
Query: 149 PP 150
PP
Sbjct: 218 PP 219
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 42 INSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMN--VKLTDFGFARVLKKG 99
++ + A+ Y MRQ+ + L H+H ++ VH DLKPENI+ + + +KL DFG L
Sbjct: 252 MSEDEAVEY-MRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310
Query: 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
+ + GT + APEV + G D+W+ GV+ Y LL G PF
Sbjct: 311 QSVKVTTGTAEFAAPEVA------EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 364
Query: 160 LRNIMEGKYSFSSPEWNDIS 179
LRN+ ++ ++ IS
Sbjct: 365 LRNVKSCDWNMDDSAFSGIS 384
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
+ APEV G D+W+ GV+ Y LL G PF LRN+ ++
Sbjct: 322 FAAPEVAEGKPV------GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 375
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
++ ISED KD IRKLL+ P R ++ +AL H + P
Sbjct: 376 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 416
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 99 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 158
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 159 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 212
Query: 154 RKQMV 158
++++
Sbjct: 213 DEEII 217
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 99 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 158
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 159 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 212
Query: 154 RKQMV 158
++++
Sbjct: 213 DEEII 217
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 178
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 179 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 154 RKQMV 158
++++
Sbjct: 233 DEEII 237
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNV-KLTDFGFARVLKKGEKLMD- 104
+ + +Q+ E L+++H++ +VHRD+K +N+L++ V K++DFG ++ L +
Sbjct: 123 TIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152
GT Y+APE++ GYG+A D+W+ G + + G PPF+
Sbjct: 183 FTGTLQYMAPEIIDKG----PRGYGKAADIWSLGCTIIEMATGKPPFY 226
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH--RKQMVMLRNIMEGKY 238
Y+APE++ GYG+A D+W+ G + + G PPF+ Q M + G +
Sbjct: 189 YMAPEIIDKG----PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMF 241
Query: 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+S + K I K P+ R + L F
Sbjct: 242 KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 205
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 206 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 259
Query: 154 RKQMV 158
++++
Sbjct: 260 DEEII 264
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 178
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 179 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 154 RKQMV 158
++++
Sbjct: 233 DEEII 237
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 177
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 178 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 231
Query: 154 RKQMV 158
++++
Sbjct: 232 DEEII 236
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 178
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 179 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 154 RKQMV 158
++++
Sbjct: 233 DEEII 237
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 190
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 191 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 154 RKQMV 158
++++
Sbjct: 245 DEEII 249
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 191
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 192 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 245
Query: 154 RKQMV 158
++++
Sbjct: 246 DEEII 250
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 191
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 192 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 245
Query: 154 RKQMV 158
++++
Sbjct: 246 DEEII 250
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 126 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 185
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 186 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 239
Query: 154 RKQMV 158
++++
Sbjct: 240 DEEII 244
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLCG 107
R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG +LK D G
Sbjct: 146 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDG 204
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
T Y PE +R + + +G++ VW+ G+++Y ++ G PF H ++++
Sbjct: 205 TRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 190
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 191 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 154 RKQMV 158
++++
Sbjct: 245 DEEII 249
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 177
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 178 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 231
Query: 154 RKQMV 158
++++
Sbjct: 232 DEEII 236
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 31/157 (19%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLK------ 97
+ RQ+ EAL ++H+ ++HR+LKP NI +D+ NVK+ DFG A+ +LK
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 98 --KGEKLMDLCGTPGYLAPEVLRANMFEDATG-YGQAVDVWACGVIMYTLLVGCPPFWHR 154
+ L GT Y+A EVL D TG Y + +D ++ G+I + + PF
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVL------DGTGHYNEKIDXYSLGIIFFEXIY---PFSTG 231
Query: 155 KQMVMLRNIMEGKYSFS---SPEWNDISGYLAPEVLR 188
+ V NI++ S S P+++D + +++R
Sbjct: 232 XERV---NILKKLRSVSIEFPPDFDDNKXKVEKKIIR 265
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 191
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 192 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 245
Query: 154 RKQMV 158
++++
Sbjct: 246 DEEII 250
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 190
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 191 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 154 RKQMV 158
++++
Sbjct: 245 DEEII 249
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 138 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 197
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 198 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 251
Query: 154 RKQMV 158
++++
Sbjct: 252 DEEII 256
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 190
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 191 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 154 RKQMV 158
++++
Sbjct: 245 DEEII 249
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC 106
++ +MRQ L+ +H + +VHRDLKPENIL+ VKL DFG AR+ L +
Sbjct: 113 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV 172
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
T Y APEVL + Y VD+W+ G I + P F + L I +
Sbjct: 173 VTLWYRAPEVLLQST------YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNV-KLTDFGFARVLKKGEKLMD- 104
+ + +Q+ E L+++H++ +VHRD+K +N+L++ V K++DFG ++ L +
Sbjct: 109 TIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 168
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152
GT Y+APE++ + GYG+A D+W+ G + + G PPF+
Sbjct: 169 FTGTLQYMAPEIID----KGPRGYGKAADIWSLGCTIIEMATGKPPFY 212
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH--RKQMVMLRNIMEGKY 238
Y+APE++ + GYG+A D+W+ G + + G PPF+ Q M + G +
Sbjct: 175 YMAPEIID----KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMF 227
Query: 239 SFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+S + K I K P+ R + L F
Sbjct: 228 KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 151 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 210
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 211 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 264
Query: 154 RKQMV 158
++++
Sbjct: 265 DEEII 269
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 40 DIINSNPAL-----RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFA 93
D I AL R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 205
Query: 94 RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+LK D GT Y PE +R + + +G++ VW+ G+++Y ++ G PF H
Sbjct: 206 ALLKD-TVYTDFDGTRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEH 259
Query: 154 RKQMV 158
++++
Sbjct: 260 DEEII 264
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILL----DDQMNVKLTDFGFARVLKKGEKLMDLC 106
++R + + H+ + +VHR++KP NI+ D Q KLTDFG AR L+ E+ + L
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY 176
Query: 107 GTPGYLAPEVL-RANMFED-ATGYGQAVDVWACGVIMYTLLVGCPPF----WHRKQMVML 160
GT YL P++ RA + +D YG VD+W+ GV Y G PF R+ ++
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236
Query: 161 RNIMEGKYS 169
I+ GK S
Sbjct: 237 YKIITGKPS 245
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 11/70 (15%)
Query: 181 YLAPEVLRANMFEDAT-------GYGQAVDVWACGVIMYTLLVGCPPF----WHRKQMVM 229
Y E L +M+E A YG VD+W+ GV Y G PF R+ +
Sbjct: 176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235
Query: 230 LRNIMEGKYS 239
+ I+ GK S
Sbjct: 236 MYKIITGKPS 245
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 27/148 (18%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ + ++++H S++HRDLK NI L + + VK+ DFG A + + L G
Sbjct: 129 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 188
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIM 164
+ ++APEV+R +D Y DV+A G+++Y L+ G P+ +R Q++ M
Sbjct: 189 SILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII----FM 241
Query: 165 EGKYSFSSPEWNDISGYLAPEV--LRAN 190
G+ GYL+P++ +R+N
Sbjct: 242 VGR------------GYLSPDLSKVRSN 257
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D Y DV+A G+++Y L+ G P+ +R
Sbjct: 180 SHQFEQLSGSILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 236
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ + SP+ + + + +++L+
Sbjct: 237 QII----FMVGR-GYLSPDLSKVRSNCPKAMKRLM 266
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM ++ G G L P
Sbjct: 212 GCIMGEMIKG--------------------------------GVLFPGT----------- 228
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK-----YSF----------SS 242
+D W ++ L CP F + Q +R +E + YSF +
Sbjct: 229 --DHIDQW--NKVIEQLGTPCPEFMKKLQPT-VRTYVENRPKYAGYSFEKLFPDVLFPAD 283
Query: 243 PEWNDI-SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
E N + + +DL+ K+L++ R SV EAL H + +
Sbjct: 284 SEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 27/148 (18%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ + ++++H S++HRDLK NI L + + VK+ DFG A + + L G
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 196
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRKQMVMLRNIM 164
+ ++APEV+R +D Y DV+A G+++Y L+ G P+ +R Q++ M
Sbjct: 197 SILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII----FM 249
Query: 165 EGKYSFSSPEWNDISGYLAPEV--LRAN 190
G+ GYL+P++ +R+N
Sbjct: 250 VGR------------GYLSPDLSKVRSN 265
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D Y DV+A G+++Y L+ G P+ +R
Sbjct: 188 SHQFEQLSGSILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 244
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ + SP+ + + + +++L+
Sbjct: 245 QII----FMVGR-GYLSPDLSKVRSNCPKAMKRLM 274
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLCG 107
R Q+ EA+ H HN V+HRD+K ENIL+D ++ +KL DFG +LK D G
Sbjct: 160 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDG 218
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
T Y PE +R + + +G++ VW+ G+++Y ++ G PF H ++++
Sbjct: 219 TRVYSPPEWIRYHRY-----HGRSAAVWSLGILLYDMVCGDIPFEHDEEII 264
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC 106
++ +MRQ L+ +H + +VHRDLKPENIL+ VKL DFG AR+ L +
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV 180
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
T Y APEVL + Y VD+W+ G I + P F + L I +
Sbjct: 181 VTLWYRAPEVLLQST------YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 233
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-KKGEKLMDLCGTPGYL 112
QL ALEH+H+ V+HRD+KP N+ + VKL D G R K L GTP Y+
Sbjct: 144 QLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYM 203
Query: 113 APEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152
+PE + N GY D+W+ G ++Y + PF+
Sbjct: 204 SPERIHEN------GYNFKSDIWSLGCLLYEMAALQSPFY 237
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV--MLRNIMEGKY 238
Y++PE + N GY D+W+ G ++Y + PF+ K + + + I + Y
Sbjct: 202 YMSPERIHEN------GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY 255
Query: 239 SFSSPEWND-ISEDPKDLIRKLLIVTPEDRYSV 270
P +D SE+ + L+ + PE R V
Sbjct: 256 ---PPLPSDHYSEELRQLVNMCINPDPEKRPDV 285
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 23 LKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENILLDD 81
L QV+DKG+ +DI+ I + +ALEH+H+ SV+HRD+KP N+L++
Sbjct: 136 LDKFYKQVIDKGQTIPEDILGK------IAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 189
Query: 82 QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141
VK+ DFG + L G Y+APE R N + GY D+W+ G+ M
Sbjct: 190 LGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPE--RINPELNQKGYSVKSDIWSLGITM 247
Query: 142 YTL-LVGCP------PFWHRKQMV 158
L ++ P PF KQ+V
Sbjct: 248 IELAILRFPYDSWGTPFQQLKQVV 271
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC 106
++ +MRQ L+ +H + +VHRDLKPENIL+ VKL DFG AR+ L +
Sbjct: 113 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVV 172
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
T Y APEVL + Y VD+W+ G I + P F + L I +
Sbjct: 173 VTLWYRAPEVLLQST------YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 104 EEFQDV-YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 162
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 163 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDLWSV 216
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+
Sbjct: 217 GCIM-------------GEMVCHKILFPGR------------------------------ 233
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK-----YSF----------SS 242
+D W ++ L CP F + Q +R +E + YSF +
Sbjct: 234 --DYIDQW--NKVIEQLGTPCPEFMKKLQPT-VRTYVENRPKYAGYSFEKLFPDVLFPAD 288
Query: 243 PEWNDI-SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
E N + + +DL+ K+L++ R SV EAL H + +
Sbjct: 289 SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 327
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 93 EEFQDV-YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 152 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDLWSV 205
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+ +WN + L
Sbjct: 206 GCIM-------------GEMVCHKILFPGRDYID--QWNKVIEQLG-------------- 236
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK-----YSF----------SS 242
CP F + Q +R +E + YSF +
Sbjct: 237 ------------------TPCPEFMKKLQPT-VRTYVENRPKYAGYSFEKLFPDVLFPAD 277
Query: 243 PEWNDI-SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
E N + + +DL+ K+L++ R SV EAL H + +
Sbjct: 278 SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ + ++++H S++HRDLK NI L + + VK+ DFG A + + L G
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 168
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ ++APEV+R +D Y DV+A G+++Y L+ G P+
Sbjct: 169 SILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D Y DV+A G+++Y L+ G P+ +R
Sbjct: 160 SHQFEQLSGSILWMAPEVIR---MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ + SP+ + + + +++L+
Sbjct: 217 QIIF----MVGR-GYLSPDLSKVRSNCPKAMKRLM 246
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL--C 106
R+ + ++ A++ VH VHRD+KP+NILLD +++L DFG L+ + L
Sbjct: 165 RFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224
Query: 107 GTPGYLAPEVLRA-NMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GTP YL+PE+L+A YG D WA GV Y + G PF+ I+
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH 284
Query: 166 GKYSFSSP 173
K S P
Sbjct: 285 YKEHLSLP 292
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 30 VVDKGEAAVQDIINSN-----PA-LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM 83
V D E ++ II N P+ ++ M + LE++H H ++HRDLKP N+LLD+
Sbjct: 90 VFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG 149
Query: 84 NVKLTDFGFARVLKKGEK-LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+KL DFG A+ + T Y APE+L A YG VD+WA G I+
Sbjct: 150 VLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFG-----ARMYGVGVDMWAVGCILA 204
Query: 143 TLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISG 180
LL+ P + L I E + + +W D+
Sbjct: 205 ELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 242
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 46/123 (37%), Gaps = 29/123 (23%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y APE+L A YG VD+WA G I+ LL+ P + L I E +
Sbjct: 178 YRAPELLFG-----ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP 232
Query: 241 SSPEWNDISEDPK------------------------DLIRKLLIVTPEDRYSVKEALNH 276
+ +W D+ P DLI+ L + P R + +AL
Sbjct: 233 TEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292
Query: 277 SFF 279
+F
Sbjct: 293 KYF 295
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D + V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVG 147
G IM ++ G
Sbjct: 212 GCIMGEMIKG 221
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 44/138 (31%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL---------------------VGCP 219
Y APEV+ GY + VD+W+ G IM ++ +G P
Sbjct: 191 YRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 220 -PFWHRKQMVMLRNIMEGK-----YSF----------SSPEWNDI-SEDPKDLIRKLLIV 262
P + +K +R +E + YSF + E N + + +DL+ K+L++
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 263 TPEDRYSVKEALNHSFFH 280
R SV EAL H + +
Sbjct: 305 DASKRISVDEALQHPYIN 322
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ ++++H S++HRDLK NI L + VK+ DFG A + + L G
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ ++APEV+R +D+ Y DV+A G+++Y L+ G P+
Sbjct: 185 SILWMAPEVIR---MQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 221
S ++ +SG ++APEV+R +D+ Y DV+A G+++Y L+ G P+
Sbjct: 176 SHQFEQLSGSILWMAPEVIR---MQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ ++++H S++HRDLK NI L + VK+ DFG A + + L G
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ ++APEV+R +D+ Y DV+A G+++Y L+ G P+
Sbjct: 185 SILWMAPEVIR---MQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 14/95 (14%)
Query: 172 SPEWNDISG---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW---HRK 225
S ++ +SG ++APEV+R +D+ Y DV+A G+++Y L+ G P+ +R
Sbjct: 176 SHQFEQLSGSILWMAPEVIR---MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
Query: 226 QMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLL 260
Q++ M G+ S SP+ + + + +++L+
Sbjct: 233 QIIE----MVGRGSL-SPDLSKVRSNCPKRMKRLM 262
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D + V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVG 147
G IM ++ G
Sbjct: 212 GCIMGEMIKG 221
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 44/138 (31%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL---------------------VGCP 219
Y APEV+ GY + VD+W+ G IM ++ +G P
Sbjct: 191 YRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 220 -PFWHRKQMVMLRNIMEGK-----YSF----------SSPEWNDI-SEDPKDLIRKLLIV 262
P + +K +R +E + YSF + E N + + +DL+ K+L++
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 263 TPEDRYSVKEALNHSFFH 280
R SV EAL H + +
Sbjct: 305 DASKRISVDEALQHPYIN 322
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D + V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVG 147
G IM ++ G
Sbjct: 212 GCIMGEMIKG 221
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 44/138 (31%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL---------------------VGCP 219
Y APEV+ GY + VD+W+ G IM ++ +G P
Sbjct: 191 YRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 220 -PFWHRKQMVMLRNIMEGK-----YSF----------SSPEWNDI-SEDPKDLIRKLLIV 262
P + +K +R +E + YSF + E N + + +DL+ K+L++
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 263 TPEDRYSVKEALNHSFFH 280
R SV EAL H + +
Sbjct: 305 DASKRISVDEALQHPYIN 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D + V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVG 147
G IM ++ G
Sbjct: 212 GCIMGEMIKG 221
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 44/138 (31%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL---------------------VGCP 219
Y APEV+ GY + VD+W+ G IM ++ +G P
Sbjct: 191 YRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 220 -PFWHRKQMVMLRNIMEGK-----YSF----------SSPEWNDI-SEDPKDLIRKLLIV 262
P + +K +R +E + YSF + E N + + +DL+ K+L++
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 263 TPEDRYSVKEALNHSFFH 280
R SV EAL H + +
Sbjct: 305 DASKRISVDEALQHPYIN 322
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC 106
++ +MRQ L+ +H + +VHRDLKPENIL+ VKL DFG AR+ L +
Sbjct: 113 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV 172
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
T Y APEVL + Y VD+W+ G I + P F + L I +
Sbjct: 173 VTLWYRAPEVLLQST------YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 56 FEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPE 115
+ L ++H+H+++HRD+K NILL + VKL DFG A ++ + GTP ++APE
Sbjct: 164 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV---GTPYWMAPE 220
Query: 116 VLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY-SFSSPE 174
V+ A D Y VDVW+ G+ L PP ++ M L +I + + + S
Sbjct: 221 VILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH 277
Query: 175 WND 177
W++
Sbjct: 278 WSE 280
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 103/267 (38%), Gaps = 69/267 (25%)
Query: 29 QVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLT 88
+V+D+ + +QD ++ + QL + H H H ++HRDLKP+N+L++ +KL
Sbjct: 107 KVLDENKTGLQD-----SQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLA 161
Query: 89 DFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 147
DFG AR T Y AP+VL + Y +VD+W+ G I ++ G
Sbjct: 162 DFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG-----SKKYSTSVDIWSIGCIFAEMITG 216
Query: 148 CPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWAC 207
P F L I + + EW P+V
Sbjct: 217 KPLFPGVTDDDQLPKIFSILGTPNPREW--------PQVQEL------------------ 250
Query: 208 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDI----SEDPKDLIRKLLIVT 263
P W ++ + F W+ I ++ DL+ +L
Sbjct: 251 ------------PLWKQRTFQV----------FEKKPWSSIIPGFCQEGIDLLSNMLCFD 288
Query: 264 PEDRYSVKEALNHSFFHPKLFDQDIEP 290
P R S ++A+NH +F +D++P
Sbjct: 289 PNKRISARDAMNHPYF------KDLDP 309
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 98/256 (38%), Gaps = 63/256 (24%)
Query: 29 QVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLT 88
+V+D+ + +QD ++ + QL + H H H ++HRDLKP+N+L++ +KL
Sbjct: 107 KVLDENKTGLQD-----SQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLA 161
Query: 89 DFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 147
DFG AR T Y AP+VL + Y +VD+W+ G I ++ G
Sbjct: 162 DFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG-----SKKYSTSVDIWSIGCIFAEMITG 216
Query: 148 CPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWAC 207
P F L I + + EW P+V
Sbjct: 217 KPLFPGVTDDDQLPKIFSILGTPNPREW--------PQVQEL------------------ 250
Query: 208 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDI----SEDPKDLIRKLLIVT 263
P W ++ + F W+ I ++ DL+ +L
Sbjct: 251 ------------PLWKQRTFQV----------FEKKPWSSIIPGFCQEGIDLLSNMLCFD 288
Query: 264 PEDRYSVKEALNHSFF 279
P R S ++A+NH +F
Sbjct: 289 PNKRISARDAMNHPYF 304
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 56 FEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPE 115
+ L ++H+H+++HRD+K NILL + VKL DFG A ++ + GTP ++APE
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV---GTPYWMAPE 181
Query: 116 VLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY-SFSSPE 174
V+ A D Y VDVW+ G+ L PP ++ M L +I + + + S
Sbjct: 182 VILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH 238
Query: 175 WND 177
W++
Sbjct: 239 WSE 241
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL------GMGYKENVDIWSV 211
Query: 138 GVIMYTLLVG 147
G IM ++ G
Sbjct: 212 GCIMGEMIKG 221
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 44/138 (31%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL---------------------VGCP 219
Y APEV+ GY + VD+W+ G IM ++ +G P
Sbjct: 191 YRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 220 -PFWHRKQMVMLRNIMEGK-----YSF----------SSPEWNDI-SEDPKDLIRKLLIV 262
P + +K +R +E + YSF + E N + + +DL+ K+L++
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 263 TPEDRYSVKEALNHSFFH 280
R SV EAL H + +
Sbjct: 305 DASKRISVDEALQHPYIN 322
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 71/279 (25%)
Query: 18 EEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENI 77
EE D+ ++ +++D V + + + Y++ Q+ ++H+H+ ++HRDLKP NI
Sbjct: 99 EEFQDV-YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 78 LLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWAC 137
++ +K+ DFG AR + T Y APEV+ GY + VD+W+
Sbjct: 158 VVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL------GMGYKENVDLWSV 211
Query: 138 GVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATG 197
G IM +MV + + G+
Sbjct: 212 GCIM-------------GEMVCHKILFPGR------------------------------ 228
Query: 198 YGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGK-----YSF----------SS 242
+D W ++ L CP F + Q +R +E + YSF +
Sbjct: 229 --DYIDQW--NKVIEQLGTPCPEFMKKLQPT-VRTYVENRPKYAGYSFEKLFPDVLFPAD 283
Query: 243 PEWNDI-SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
E N + + +DL+ K+L++ R SV EAL H + +
Sbjct: 284 SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK-KGEKLMDLC 106
++Y QL + L H + ++HRDLKP+N+L++ + +KL DFG AR
Sbjct: 110 VKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV 169
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
T Y AP+VL + Y ++D+W+CG I+ ++ G P F
Sbjct: 170 VTLWYRAPDVLMG-----SRTYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 67/116 (57%), Gaps = 9/116 (7%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCG 107
I RQ + ++++H +++HRD+K NI L + + VK+ DFG A V + +++ G
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTG 196
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH---RKQMVML 160
+ ++APEV+R +D + DV++ G+++Y L+ G P+ H R Q++ +
Sbjct: 197 SVLWMAPEVIR---MQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH---RKQMVMLRNIMEGK 237
++APEV+R +D + DV++ G+++Y L+ G P+ H R Q++ M G+
Sbjct: 200 WMAPEVIR---MQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII----FMVGR 252
Query: 238 YSFSSPEWNDISEDPKDLIRKLL 260
++SP+ + + ++ +++L+
Sbjct: 253 -GYASPDLSKLYKNCPKAMKRLV 274
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
+++++ Q+ L+++H+ ++HRDLKP N+ +++ +K+ DFG AR +++
Sbjct: 156 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA 213
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE++ M Y VD+W+ G IM LL G F + L+ IM
Sbjct: 214 TRWYRAPEIMLNWMH-----YNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIM 265
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 35/159 (22%)
Query: 176 NDISGYLAPEVLRA-NMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 234
++++GY+A RA + + Y VD+W+ G IM LL G F + L+ IM
Sbjct: 206 DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIM 265
Query: 235 EGKYSFSSPE--------------WNDISEDPK---------------DLIRKLLIVTPE 265
+ + + P N + + PK DL+ K+L++ +
Sbjct: 266 --RLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTD 323
Query: 266 DRYSVKEALNHSFFHPKLFDQDIEPIKKDYKTA--SRKL 302
R + EAL H +F + D D EP + Y + SR+L
Sbjct: 324 KRITASEALAHPYF-SQYHDPDDEPESEPYDQSFESRQL 361
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 16/144 (11%)
Query: 23 LKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENILLDD 81
L QV+DKG+ +DI+ I + +ALEH+H+ SV+HRD+KP N+L++
Sbjct: 92 LDKFYKQVIDKGQTIPEDILGK------IAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 145
Query: 82 QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141
VK+ DFG + L G Y+APE R N + GY D+W+ G+ M
Sbjct: 146 LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPE--RINPELNQKGYSVKSDIWSLGITM 203
Query: 142 YTLLV-------GCPPFWHRKQMV 158
L + PF KQ+V
Sbjct: 204 IELAILRFPYDSWGTPFQQLKQVV 227
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKPEN+L++ + +KL DFG AR +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 165 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 206
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 207 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 249 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKPEN+L++ + +KL DFG AR +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 164 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 205
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 206 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 248 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKPEN+L++ + +KL DFG AR +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 166 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 207
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 208 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 250 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
+ Q+ + ++++H+ ++HRDLKP NI L D VK+ DFG LK K GT
Sbjct: 141 LFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLR 200
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC-PPFWHRKQMVMLRN 162
Y++PE + + YG+ VD++A G+I+ LL C F K LR+
Sbjct: 201 YMSPEQISSQ------DYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRD 247
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y++PE + + YG+ VD++A G+I+ LL C + + ++ +G S
Sbjct: 201 YMSPEQISSQ------DYGKEVDLYALGLILAELLHVCDTAFETSKFFT--DLRDGIIS- 251
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEAL 274
+ + K L++KLL PEDR + E L
Sbjct: 252 -----DIFDKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKPEN+L++ + +KL DFG AR +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 164 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 205
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 206 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 248 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKPEN+L++ + +KL DFG AR +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 163 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 204
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 205 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 247 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 47 ALRYIMRQLFEALEHVHNH-SVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
++ I++ + + ++HN ++ HRD+KP NIL+D VKL+DFG + + +K+
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM-VDKKIKGS 210
Query: 106 CGTPGYLAPEVLRANMFEDATGY-GQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
GT ++ PE F + + Y G VD+W+ G+ +Y + PF + +V L N +
Sbjct: 211 RGTYEFMPPE-----FFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
Query: 165 EGK 167
K
Sbjct: 266 RTK 268
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 37/157 (23%)
Query: 166 GKYSFSSPEWNDISGYLAPEVLRANMFEDATGY-GQAVDVWACGVIMYTLLVGCPPFWHR 224
G Y F PE+ F + + Y G VD+W+ G+ +Y + PF +
Sbjct: 212 GTYEFMPPEF----------------FSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255
Query: 225 KQMVMLRNIMEGK---YSF-------------SSPEWNDISEDPKDLIRKLLIVTPEDRY 268
+V L N + K Y S+ N +S + D ++ L P +R
Sbjct: 256 ISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315
Query: 269 SVKEALNHSFFHPKLFDQDIEPIKKDYKTASRKLSKI 305
+ ++AL H + L D +IE +++ K +K K+
Sbjct: 316 TSEDALKHEW----LADTNIEDLREFSKELYKKRKKL 348
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 110 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 169
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 170 EVVTLWYRAPEILLGXKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 211
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 212 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 253
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 254 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 163 EVVTLWYRAPEILLGXKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 204
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 205 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 247 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 113/267 (42%), Gaps = 61/267 (22%)
Query: 35 EAAVQDIINSNPAL----RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ-MNVKLTD 89
E + +++ P L R M QL L+++H+ +V+HRDLKP N+ ++ + + +K+ D
Sbjct: 105 ETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGD 164
Query: 90 FGFARVL-----KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
FG AR++ KG L + T Y +P +L + Y +A+D+WA G I +
Sbjct: 165 FGLARIMDPHYSHKGH-LSEGLVTKWYRSPRLLLS-----PNNYTKAIDMWAAGCIFAEM 218
Query: 145 LVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDV 204
L G F ++ ++ I+E + ++ + P +R +M E Q
Sbjct: 219 LTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVI-PVYIRNDMTEPHKPLTQ---- 273
Query: 205 WACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTP 264
LL G IS + D + ++L +P
Sbjct: 274 ---------LLPG------------------------------ISREAVDFLEQILTFSP 294
Query: 265 EDRYSVKEALNHSFFHPKLFDQDIEPI 291
DR + +EAL+H + F D EPI
Sbjct: 295 MDRLTAEEALSHPYMSIYSFPMD-EPI 320
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 103 PLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 163 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 204
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 205 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 247 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 110 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 169
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 170 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 211
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 212 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 253
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 254 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 163
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 164 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 205
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 206 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 248 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 162 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 203
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 204 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 246 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 166 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 207
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 208 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 250 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 107 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 166
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 167 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 208
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 209 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 250
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 251 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 166 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 207
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 208 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 250 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 163 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 204
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 205 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 247 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 166 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 207
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 208 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 250 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 165 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 206
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 207 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 249 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 166 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 207
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 208 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 250 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 165 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 206
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 207 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 249 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 163 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 204
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 205 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 247 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 165 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 206
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 207 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 249 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 90/235 (38%), Gaps = 51/235 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 162 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 203
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 204 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 246 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 90/235 (38%), Gaps = 51/235 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 164 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 205
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 206 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 248 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 166 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 207
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 208 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 250 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 161
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 162 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 203
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 204 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 246 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 163 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 204
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 205 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 247 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 164 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 205
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 206 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 248 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 107 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 166
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 167 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 208
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 209 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 250
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 251 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 163 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 204
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 205 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 247 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 162 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 203
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 204 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 246 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 163 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 204
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 205 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 247 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 163 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 204
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 205 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 247 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 106 -CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 162 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 203
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 204 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 246 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 163 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 204
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 205 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 247 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 90/236 (38%), Gaps = 51/236 (21%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL-MD 104
P ++ + QL + L H+H V+HRDLKP+N+L++ + +KL DFG AR +
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 161
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIM 164
T Y APE+L + Y AVD+W+ G I +MV R +
Sbjct: 162 EVVTLWYRAPEILLGCKY-----YSTAVDIWSLGCIF-------------AEMVTRRALF 203
Query: 165 EGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
G +F G +V GV P W R
Sbjct: 204 PGDSEID------------------QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 225 KQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
+ +S P + ED + L+ ++L P R S K AL H FF
Sbjct: 246 QD-----------FSKVVPP---LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 34 GEAAVQDIIN------SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKL 87
G +V DII + + I++ + LE++H +HRD+K NILL+ + + KL
Sbjct: 107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKL 166
Query: 88 TDFGFA-RVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
DFG A ++ K + GTP ++APEV++ GY D+W+ G+ +
Sbjct: 167 ADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQ------EIGYNCVADIWSLGITAIEMAE 220
Query: 147 GCPPFWHRKQMVMLRNI-MEGKYSFSSPE-WND 177
G PP+ M + I +F PE W+D
Sbjct: 221 GKPPYADIHPMRAIFMIPTNPPPTFRKPELWSD 253
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 40 DIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG 99
+IIN + ++ + QL L + H V+HRDLKP+N+L++++ +KL DFG AR
Sbjct: 95 NIINMH-NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153
Query: 100 EKLMD-LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
K D T Y P++L +T Y +D+W G I Y + G P F
Sbjct: 154 TKTYDNEVVTLWYRPPDILLG-----STDYSTQIDMWGVGCIFYEMATGRPLF 201
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 31/125 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF---WHRKQMVMLRNIM--- 234
Y P++L +T Y +D+W G I Y + G P F +Q+ + I+
Sbjct: 166 YRPPDILLG-----STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTP 220
Query: 235 -----------EGKYSFSSPEWN---------DISEDPKDLIRKLLIVTPEDRYSVKEAL 274
E +++ P++ + D DL+ KLL +R S ++A+
Sbjct: 221 TEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAM 280
Query: 275 NHSFF 279
H FF
Sbjct: 281 KHPFF 285
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG----EKLMDLC 106
++ +AL H + ++HRD+KP NIL+ VK+ DFG AR + + +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
GT YL+PE R + + + DV++ G ++Y +L G PPF
Sbjct: 181 GTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPF 219
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM-VMLRNIMEGKYS 239
YL+PE R + + + DV++ G ++Y +L G PPF + V +++ E
Sbjct: 185 YLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRY 268
S+ +S D ++ K L PE+RY
Sbjct: 239 PSA-RHEGLSADLDAVVLKALAKNPENRY 266
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 37/145 (25%)
Query: 40 DIINSNP--ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFAR-- 94
DI+NS +R M LF+AL+ +H +VHRD+KP N L + ++ L DFG A+
Sbjct: 109 DILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168
Query: 95 ---------------------------VLKKGEKLMDLCGTPGYLAPEVLRANMFEDATG 127
L + +++ GTPG+ APEVL
Sbjct: 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVL-----TKCPN 223
Query: 128 YGQAVDVWACGVIMYTLLVGCPPFW 152
A+D+W+ GVI +LL G PF+
Sbjct: 224 QTTAIDMWSAGVIFLSLLSGRYPFY 248
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
+ Q+ + ++++H+ +++RDLKP NI L D VK+ DFG LK K GT
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLR 186
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
Y++PE + + YG+ VD++A G+I+ LL C
Sbjct: 187 YMSPEQISSQ------DYGKEVDLYALGLILAELLHVC 218
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y++PE + + YG+ VD++A G+I+ LL C + + ++ +G S
Sbjct: 187 YMSPEQISSQ------DYGKEVDLYALGLILAELLHVCDTAFETSK--FFTDLRDGIIS- 237
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEAL 274
+ + K L++KLL PEDR + E L
Sbjct: 238 -----DIFDKKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG----EKLMDLC 106
++ +AL H + ++HRD+KP NI++ VK+ DFG AR + + +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
GT YL+PE R + + + DV++ G ++Y +L G PPF
Sbjct: 181 GTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPF 219
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW-HRKQMVMLRNIMEGKYS 239
YL+PE R + + + DV++ G ++Y +L G PPF V +++ E
Sbjct: 185 YLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIP 238
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRY 268
S+ +S D ++ K L PE+RY
Sbjct: 239 PSA-RHEGLSADLDAVVLKALAKNPENRY 266
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG----EKLMDLC 106
++ +AL H + ++HRD+KP NI++ VK+ DFG AR + + +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
GT YL+PE R + + + DV++ G ++Y +L G PPF
Sbjct: 181 GTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPF 219
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM-VMLRNIMEGKYS 239
YL+PE R + + + DV++ G ++Y +L G PPF + V +++ E
Sbjct: 185 YLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRY 268
S+ +S D ++ K L PE+RY
Sbjct: 239 PSA-RHEGLSADLDAVVLKALAKNPENRY 266
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG----EKLMDLC 106
++ +AL H + ++HRD+KP NI++ VK+ DFG AR + + +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
GT YL+PE R + + + DV++ G ++Y +L G PPF
Sbjct: 181 GTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPF 219
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM-VMLRNIMEGKYS 239
YL+PE R + + + DV++ G ++Y +L G PPF + V +++ E
Sbjct: 185 YLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRY 268
S+ +S D ++ K L PE+RY
Sbjct: 239 PSA-RHEGLSADLDAVVLKALAKNPENRY 266
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG----EKLMDLC 106
++ +AL H + ++HRD+KP NI++ VK+ DFG AR + + +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
GT YL+PE R + + + DV++ G ++Y +L G PPF
Sbjct: 181 GTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPF 219
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM-VMLRNIMEGKYS 239
YL+PE R + + + DV++ G ++Y +L G PPF + V +++ E
Sbjct: 185 YLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 238
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRY 268
S+ +S D ++ K L PE+RY
Sbjct: 239 PSA-RHEGLSADLDAVVLKALAKNPENRY 266
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMN-VKLTDFGFARVLKKGEKLMDLCGTPGYL 112
QLF A+ +H+ + HRD+KP+N+L++ + N +KL DFG A+ L E + + Y
Sbjct: 149 QLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYR 208
Query: 113 APEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
APE++ AT Y ++D+W+ G + L++G P F + L I++
Sbjct: 209 APELMLG-----ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQ 256
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 30/124 (24%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK---QMVMLRNIM--- 234
Y APE++ AT Y ++D+W+ G + L++G P F Q+V + IM
Sbjct: 207 YRAPELMLG-----ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTP 261
Query: 235 -------------EGKY-SFSSPEWNDISEDPK-----DLIRKLLIVTPEDRYSVKEALN 275
E ++ + + +W I + DL+ ++L P+ R + EA+
Sbjct: 262 TKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321
Query: 276 HSFF 279
H FF
Sbjct: 322 HPFF 325
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 18/109 (16%)
Query: 54 QLFEALEHVHNHSVV---HRDLKPENILLDDQMN--------VKLTDFGFARVLKKGEKL 102
Q+ + ++H+ ++V HRDLK NIL+ ++ +K+TDFG AR + K
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK- 171
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
M G ++APEV+RA+MF + DVW+ GV+++ LL G PF
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGS------DVWSYGVLLWELLTGEVPF 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG----EKLMDLC 106
++ +AL H + ++HRD+KP NI++ VK+ DFG AR + + +
Sbjct: 138 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
GT YL+PE R + + + DV++ G ++Y +L G PPF
Sbjct: 198 GTAQYLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPF 236
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM-VMLRNIMEGKYS 239
YL+PE R + + + DV++ G ++Y +L G PPF + V +++ E
Sbjct: 202 YLSPEQARGDSVDARS------DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP 255
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRY 268
S+ +S D ++ K L PE+RY
Sbjct: 256 PSA-RHEGLSADLDAVVLKALAKNPENRY 283
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLC 106
++ + +Q +AL ++H++ ++HRDLK NIL ++KL DFG A+ + ++
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 196
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APEV+ +D Y DVW+ G+ + + PP M +L I +
Sbjct: 197 GTPYWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 255
Query: 167 K 167
+
Sbjct: 256 E 256
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
Query: 161 RNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPP 220
R I +P W +APEV+ +D Y DVW+ G+ + + PP
Sbjct: 187 RTIQRRDSFIGTPYW------MAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPP 239
Query: 221 FWHRKQMVMLRNIMEGKY-SFSSPE-WNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSF 278
M +L I + + + + P W S + KD ++K L + R++ + L H F
Sbjct: 240 HHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLC 106
++ + +Q +AL ++H++ ++HRDLK NIL ++KL DFG A+ + ++
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI 196
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APEV+ +D Y DVW+ G+ + + PP M +L I +
Sbjct: 197 GTPYWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 255
Query: 167 K 167
+
Sbjct: 256 E 256
Score = 34.7 bits (78), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY-S 239
++APEV+ +D Y DVW+ G+ + + PP M +L I + + +
Sbjct: 201 WMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 259
Query: 240 FSSPE-WNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSF 278
+ P W S + KD ++K L + R++ + L H F
Sbjct: 260 LAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 23 LKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNH-SVVHRDLKPENILLDD 81
L QV+DKG+ +DI+ I + +ALEH+H+ SV+HRD+KP N+L++
Sbjct: 119 LDKFYKQVIDKGQTIPEDILGK------IAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 172
Query: 82 QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141
VK DFG + L G Y APE R N + GY D+W+ G+
Sbjct: 173 LGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPE--RINPELNQKGYSVKSDIWSLGITX 230
Query: 142 YTLLV-------GCPPFWHRKQMV 158
L + PF KQ+V
Sbjct: 231 IELAILRFPYDSWGTPFQQLKQVV 254
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 108/270 (40%), Gaps = 60/270 (22%)
Query: 11 RVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHR 70
R+V+ + DLK L +D E ++ + + + QL + + H+ V+HR
Sbjct: 74 RLVLVFEHLDQDLKKL----LDVCEGGLESV-----TAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 71 DLKPENILLDDQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYG 129
DLKP+N+L++ + +K+ DFG AR K T Y AP+VL + Y
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG-----SKKYS 179
Query: 130 QAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRA 189
+D+W+ G I ++ G P F + L I + +S W +++
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVT---------- 229
Query: 190 NMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 249
+ Y V+ P W + ++G +
Sbjct: 230 ----ELPKYDPNFTVYE------------PLPW--------ESFLKG-----------LD 254
Query: 250 EDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
E DL+ K+L + P R + K+AL H++F
Sbjct: 255 ESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 108/270 (40%), Gaps = 60/270 (22%)
Query: 11 RVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHR 70
R+V+ + DLK L +D E ++ + + + QL + + H+ V+HR
Sbjct: 74 RLVLVFEHLDQDLKKL----LDVCEGGLESV-----TAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 71 DLKPENILLDDQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYG 129
DLKP+N+L++ + +K+ DFG AR K T Y AP+VL + Y
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG-----SKKYS 179
Query: 130 QAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRA 189
+D+W+ G I ++ G P F + L I + +S W +++
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT---------- 229
Query: 190 NMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 249
+ Y V+ P W + ++G +
Sbjct: 230 ----ELPKYDPNFTVYE------------PLPW--------ESFLKG-----------LD 254
Query: 250 EDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
E DL+ K+L + P R + K+AL H++F
Sbjct: 255 ESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 37 AVQDIINSNPALRYIMRQLFEALEHV-HNHSVVHRDLKPENILLDDQMNVKLTDFGFARV 95
+V D + L I +AL H+ N ++HRD+KP NILLD N+KL DFG +
Sbjct: 116 SVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175
Query: 96 LKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
L G Y+APE R + GY DVW+ G+ +Y L G P+
Sbjct: 176 LVDSIAKTRDAGCRPYMAPE--RIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF-ARVLKKGEKLMDLC 106
++ + +Q +AL ++H++ ++HRDLK NIL ++KL DFG A+ + ++
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI 196
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEG 166
GTP ++APEV+ +D Y DVW+ G+ + + PP M +L I +
Sbjct: 197 GTPYWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 255
Query: 167 K 167
+
Sbjct: 256 E 256
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY-S 239
++APEV+ +D Y DVW+ G+ + + PP M +L I + + +
Sbjct: 201 WMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 259
Query: 240 FSSPE-WNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSF 278
+ P W S + KD ++K L + R++ + L H F
Sbjct: 260 LAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 108/270 (40%), Gaps = 60/270 (22%)
Query: 11 RVVVRVKEEGDDLKHLAAQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHR 70
R+V+ + DLK L +D E ++ + + + QL + + H+ V+HR
Sbjct: 74 RLVLVFEHLDQDLKKL----LDVCEGGLESV-----TAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 71 DLKPENILLDDQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYG 129
DLKP+N+L++ + +K+ DFG AR K T Y AP+VL + Y
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG-----SKKYS 179
Query: 130 QAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRA 189
+D+W+ G I ++ G P F + L I + +S W +++
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT---------- 229
Query: 190 NMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDIS 249
+ Y V+ P W + ++G +
Sbjct: 230 ----ELPKYDPNFTVYE------------PLPW--------ESFLKG-----------LD 254
Query: 250 EDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
E DL+ K+L + P R + K+AL H++F
Sbjct: 255 ESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 13/123 (10%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILL----DDQMNVKLTDFGFARV----LKKG 99
++ ++ Q+ + + ++H + V+HRDLKP NIL+ ++ VK+ D GFAR+ LK
Sbjct: 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL 189
Query: 100 EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
L + T Y APE+L A Y +A+D+WA G I LL P F R++ +
Sbjct: 190 ADLDPVVVTFWYRAPELLLG-----ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 244
Query: 160 LRN 162
N
Sbjct: 245 TSN 247
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 20/85 (23%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF------------WHRKQMV 228
Y APE+L A Y +A+D+WA G I LL P F +H Q+
Sbjct: 201 YRAPELLLG-----ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255
Query: 229 MLRNIMEGKYSFSSPEWNDISEDPK 253
+ N+M + +W DI + P+
Sbjct: 256 RIFNVMGFP---ADKDWEDIKKMPE 277
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 52/245 (21%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+R+ M +L +AL++ H+ ++HRD+KP N+++D Q ++L D+G A ++
Sbjct: 139 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV 198
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK----QMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H + Q+V +
Sbjct: 199 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAK 253
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRAN-MFEDATGYGQAVDVWACGVIMYTLLVGCPPF 221
++ + ++ GYL + + F D G + W F
Sbjct: 254 VLGTE---------ELYGYLKKYHIDLDPHFNDILG-QHSRKRWEN-------------F 290
Query: 222 WHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
H + ++ SPE DL+ KLL + R + KEA+ H +F+P
Sbjct: 291 IHSENRHLV-----------SPE-------ALDLLDKLLRYDHQQRLTAKEAMEHPYFYP 332
Query: 282 KLFDQ 286
+ +Q
Sbjct: 333 VVKEQ 337
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 52/245 (21%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+R+ M +L +AL++ H+ ++HRD+KP N+++D Q ++L D+G A ++
Sbjct: 134 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV 193
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK----QMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H + Q+V +
Sbjct: 194 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAK 248
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRAN-MFEDATGYGQAVDVWACGVIMYTLLVGCPPF 221
++ + ++ GYL + + F D G + W F
Sbjct: 249 VLGTE---------ELYGYLKKYHIDLDPHFNDILG-QHSRKRWEN-------------F 285
Query: 222 WHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHP 281
H + ++ SPE DL+ KLL + R + KEA+ H +F+P
Sbjct: 286 IHSENRHLV-----------SPE-------ALDLLDKLLRYDHQQRLTAKEAMEHPYFYP 327
Query: 282 KLFDQ 286
+ +Q
Sbjct: 328 VVKEQ 332
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 42 INSNPALRYIMRQLF-----EALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL 96
++ P L + MR + +H + +HRD+K NILLD+ K++DFG AR
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 97 KK-GEKLMD--LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF-W 152
+K + +M + GT Y+APE LR + + D+++ GV++ ++ G P
Sbjct: 184 EKFAQTVMXSRIVGTTAYMAPEALRGEITPKS-------DIYSFGVVLLEIITGLPAVDE 236
Query: 153 HRKQMVML 160
HR+ ++L
Sbjct: 237 HREPQLLL 244
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 179 SGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF-WHRKQMVML 230
+ Y+APE LR + + D+++ GV++ ++ G P HR+ ++L
Sbjct: 199 TAYMAPEALRGEITPKS-------DIYSFGVVLLEIITGLPAVDEHREPQLLL 244
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 42 INSNPALRYIMRQLF-----EALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL 96
++ P L + MR + +H + +HRD+K NILLD+ K++DFG AR
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 97 KK-GEKLMD--LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF-W 152
+K + +M + GT Y+APE LR + + D+++ GV++ ++ G P
Sbjct: 184 EKFAQTVMXXRIVGTTAYMAPEALRGEITPKS-------DIYSFGVVLLEIITGLPAVDE 236
Query: 153 HRKQMVML 160
HR+ ++L
Sbjct: 237 HREPQLLL 244
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 179 SGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF-WHRKQMVML 230
+ Y+APE LR + + D+++ GV++ ++ G P HR+ ++L
Sbjct: 199 TAYMAPEALRGEITPKS-------DIYSFGVVLLEIITGLPAVDEHREPQLLL 244
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+L+D + ++L D+G A G++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 193 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 248 VLGTEDLYDYIDKYNIELDPRFNDILG 274
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 101 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 138
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDW-----------GLAEFYHPGQE 187
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 188 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 42 INSNPALRYIMRQLF-----EALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL 96
++ P L + MR + +H + +HRD+K NILLD+ K++DFG AR
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS 177
Query: 97 KK-GEKLMD--LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF-W 152
+K + +M + GT Y+APE LR + + D+++ GV++ ++ G P
Sbjct: 178 EKFAQXVMXXRIVGTTAYMAPEALRGEITPKS-------DIYSFGVVLLEIITGLPAVDE 230
Query: 153 HRKQMVML 160
HR+ ++L
Sbjct: 231 HREPQLLL 238
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 179 SGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF-WHRKQMVML 230
+ Y+APE LR + + D+++ GV++ ++ G P HR+ ++L
Sbjct: 193 TAYMAPEALRGEITPKS-------DIYSFGVVLLEIITGLPAVDEHREPQLLL 238
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 193 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 248 VLGTEDLYDYIDKYNIELDPRFNDILG 274
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 101/277 (36%), Gaps = 86/277 (31%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 101 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 138
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 187
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 188 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
S + D + KLL + R + +EA+ H +F+
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 191
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 192 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 246
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 247 VLGTEDLYDYIDKYNIELDPRFNDILG 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 100 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 137
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 186
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 187 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 227
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 228 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 287
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 288 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 330
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 193 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 248 VLGTEDLYDYIDKYNIELDPRFNDILG 274
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 101 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 138
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 187
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 188 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 193 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 248 VLGTEDLYDYIDKYNIELDPRFNDILG 274
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 101 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 138
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 187
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 188 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 131 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 190
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 191 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 245
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 246 VLGTEDLYDYIDKYNIELDPRFNDILG 272
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 101/277 (36%), Gaps = 86/277 (31%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 99 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 136
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 137 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 185
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 186 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 226
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 227 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 286
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
S + D + KLL + R + +EA+ H +F+
Sbjct: 287 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 193 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 248 VLGTEDLYDYIDKYNIELDPRFNDILG 274
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 101 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 138
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 187
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 188 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 191
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 192 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 246
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 247 VLGTEDLYDYIDKYNIELDPRFNDILG 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 100 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 137
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 186
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 187 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 227
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 228 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 287
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 288 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 330
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 193 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 248 VLGTEDLYDYIDKYNIELDPRFNDILG 274
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 101 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 138
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 187
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 188 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 193 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 248 VLGTEDLYDYIDKYNIELDPRFNDILG 274
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 101 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLRQTLTDYDIRFYMY 138
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 187
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 188 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 193 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 248 VLGTEDLYDYIDKYNIELDPRFNDILG 274
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 101 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 138
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 187
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 188 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 193 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 248 VLGTEDLYDYIDKYNIELDPRFNDILG 274
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 105/283 (37%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 101 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 138
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 187
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 188 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+P + +Q
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYPVVKEQ 331
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 193 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 248 VLGTEDLYDYIDKYNIELDPRFNDILG 274
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 101 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 138
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 187
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 188 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG--EKLMDL 105
++ + +Q +AL ++H++ ++HRDLK NIL ++KL DFG + + ++
Sbjct: 110 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSF 169
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
GTP ++APEV+ +D Y DVW+ G+ + + PP M +L I +
Sbjct: 170 IGTPYWMAPEVVMCETSKD-RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 228
Query: 166 GK 167
+
Sbjct: 229 SE 230
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 13/121 (10%)
Query: 161 RNIMEGKYSF-SSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
R ++ + SF +P W +APEV+ +D Y DVW+ G+ + + P
Sbjct: 160 RTXIQRRDSFIGTPYW------MAPEVVMCETSKD-RPYDYKADVWSLGITLIEMAEIEP 212
Query: 220 PFWHRKQMVMLRNIMEGKY-SFSSPE-WNDISEDPKDLIRKLLIVTPEDRYSVKEALNHS 277
P M +L I + + + + P W S + KD ++K L + R++ + L H
Sbjct: 213 PHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVDARWTTSQLLQHP 269
Query: 278 F 278
F
Sbjct: 270 F 270
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 193 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 248 VLGTEDLYDYIDKYNIELDPRFNDILG 274
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 101 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 138
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 187
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 188 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 228
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 229 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 288
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 289 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 19/147 (12%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLD-DQMNVKLTDFGFARVLKKGEKLMDLC 106
+R+ M ++ +AL++ H+ ++HRD+KP N+++D + ++L D+G A G++
Sbjct: 138 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 197
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH----RKQMVMLRN 162
+ + PE+L D Y ++D+W+ G ++ +++ PF+H Q+V +
Sbjct: 198 ASRYFKGPELL-----VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 252
Query: 163 IM--EGKYSFS-------SPEWNDISG 180
++ E Y + P +NDI G
Sbjct: 253 VLGTEDLYDYIDKYNIELDPRFNDILG 279
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 104/283 (36%), Gaps = 86/283 (30%)
Query: 38 VQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK 97
V+D ++ PAL EHV+N D K Q+ LTD+ +
Sbjct: 106 VKDPVSRTPAL---------VFEHVNN-----TDFK--------QLYQTLTDYDIRFYMY 143
Query: 98 KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQM 157
+ K +D C + G + +V N+ D + W G F+H Q
Sbjct: 144 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW-----------GLAEFYHPGQE 192
Query: 158 VMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 217
+R + +Y F PE + D Y ++D+W+ G ++ +++
Sbjct: 193 YNVR--VASRY-FKGPE----------------LLVDYQMYDYSLDMWSLGCMLASMIFR 233
Query: 218 CPPFWH----RKQMVMLRNIM--EGKYSFSS-------PEWNDI---------------- 248
PF+H Q+V + ++ E Y + P +NDI
Sbjct: 234 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSE 293
Query: 249 -----SEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKLFDQ 286
S + D + KLL + R + +EA+ H +F+ + DQ
Sbjct: 294 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 336
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 53 RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM---DLCGTP 109
+ + EA+ +H H +VH DLKP N L+ D M +KL DFG A ++ + GT
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 110 GYLAPEVLRANMFEDATG-----YGQAVDVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 163
Y+ PE ++ G DVW+ G I+Y + G PF Q+ L I
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 164 MEGKYSFSSPE 174
++ + P+
Sbjct: 281 IDPNHEIEFPD 291
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 180 GYLAPEVLRANMFEDATGYGQAV-----DVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 233
Y+ PE ++ G ++ DVW+ G I+Y + G PF Q+ L I
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 234 MEGKYSFSSPEWNDISE-DPKDLIRKLLIVTPEDRYSVKEALNHSFF----HP 281
++ + P DI E D +D+++ L P+ R S+ E L H + HP
Sbjct: 281 IDPNHEIEFP---DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMD---LCGTPGYLAP 114
+ +H + +HRD+K NILLD+ K++DFG AR +K + + + GT Y AP
Sbjct: 136 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 115 EVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF-WHRKQMVML 160
E LR + + D+++ GV++ ++ G P HR+ ++L
Sbjct: 196 EALRGEITPKS-------DIYSFGVVLLEIITGLPAVDEHREPQLLL 235
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 53 RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM---DLCGTP 109
+ + EA+ +H H +VH DLKP N L+ D M +KL DFG A ++ + GT
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTV 192
Query: 110 GYLAPEVLRANMFEDATG-----YGQAVDVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 163
Y+ PE ++ G DVW+ G I+Y + G PF Q+ L I
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 164 MEGKYSFSSPE 174
++ + P+
Sbjct: 253 IDPNHEIEFPD 263
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 180 GYLAPEVLRANMFEDATGYGQAV-----DVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 233
Y+ PE ++ G ++ DVW+ G I+Y + G PF Q+ L I
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 234 MEGKYSFSSPEWNDISE-DPKDLIRKLLIVTPEDRYSVKEALNHSF 278
++ + P DI E D +D+++ L P+ R S+ E L H +
Sbjct: 253 IDPNHEIEFP---DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 53 RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM---DLCGTP 109
+ + EA+ +H H +VH DLKP N L+ D M +KL DFG A ++ + GT
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 110 GYLAPEVLRANMFEDATG-----YGQAVDVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 163
Y+ PE ++ G DVW+ G I+Y + G PF Q+ L I
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 164 MEGKYSFSSPE 174
++ + P+
Sbjct: 281 IDPNHEIEFPD 291
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 180 GYLAPEVLRANMFEDATGYGQAV-----DVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 233
Y+ PE ++ G ++ DVW+ G I+Y + G PF Q+ L I
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 234 MEGKYSFSSPEWNDISE-DPKDLIRKLLIVTPEDRYSVKEALNHSFF----HP 281
++ + P DI E D +D+++ L P+ R S+ E L H + HP
Sbjct: 281 IDPNHEIEFP---DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 107/278 (38%), Gaps = 60/278 (21%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-----KKGEKL 102
++ +M+ L L ++H + ++HRD+K N+L+ +KL DFG AR + +
Sbjct: 127 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
+ T Y PE+L YG +D+W G IM + P +M N
Sbjct: 187 XNRVVTLWYRPPELLLGE-----RDYGPPIDLWGAGCIMAEMWTRSP--------IMQGN 233
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 222
+ + + S I+ + P V ++E L+ G
Sbjct: 234 TEQHQLALISQLCGSITPEVWPNVDNYELYEK-----------------LELVKG----Q 272
Query: 223 HRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
RK L+ + Y+ DLI KLL++ P R +ALNH FF
Sbjct: 273 KRKVKDRLKAYVRDPYAL-------------DLIDKLLVLDPAQRIDSDDALNHDFFWSD 319
Query: 283 LFDQDIEPIKKDYKTA--------SRKLSKINQLTEFQ 312
D++ + + T+ RK S+I Q + Q
Sbjct: 320 PMPSDLKGMLSTHLTSMFEYLAPPRRKGSQITQQSTNQ 357
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 53 RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM---DLCGTP 109
+ + EA+ +H H +VH DLKP N L+ D M +KL DFG A ++ + GT
Sbjct: 115 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 110 GYLAPEVLRANMFEDATG-----YGQAVDVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 163
Y+ PE ++ G DVW+ G I+Y + G PF Q+ L I
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 233
Query: 164 MEGKYSFSSPE 174
++ + P+
Sbjct: 234 IDPNHEIEFPD 244
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 180 GYLAPEVLRANMFEDATGYGQAV-----DVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 233
Y+ PE ++ G ++ DVW+ G I+Y + G PF Q+ L I
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 233
Query: 234 MEGKYSFSSPEWNDISE-DPKDLIRKLLIVTPEDRYSVKEALNHSF 278
++ + P DI E D +D+++ L P+ R S+ E L H +
Sbjct: 234 IDPNHEIEFP---DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 53 RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM---DLCGTP 109
+ + EA+ +H H +VH DLKP N L+ D M +KL DFG A ++ + GT
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 110 GYLAPEVLRANMFEDATG-----YGQAVDVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 163
Y+ PE ++ G DVW+ G I+Y + G PF Q+ L I
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 164 MEGKYSFSSPE 174
++ + P+
Sbjct: 253 IDPNHEIEFPD 263
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 180 GYLAPEVLRANMFEDATGYGQAV-----DVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 233
Y+ PE ++ G ++ DVW+ G I+Y + G PF Q+ L I
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 234 MEGKYSFSSPEWNDISE-DPKDLIRKLLIVTPEDRYSVKEALNHSF 278
++ + P DI E D +D+++ L P+ R S+ E L H +
Sbjct: 253 IDPNHEIEFP---DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 53 RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM---DLCGTP 109
+ + EA+ +H H +VH DLKP N L+ D M +KL DFG A ++ + GT
Sbjct: 118 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 110 GYLAPEVLRANMFEDATG-----YGQAVDVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 163
Y+ PE ++ G DVW+ G I+Y + G PF Q+ L I
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 236
Query: 164 MEGKYSFSSPE 174
++ + P+
Sbjct: 237 IDPNHEIEFPD 247
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 180 GYLAPEVLRANMFEDATGYGQAV-----DVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 233
Y+ PE ++ G ++ DVW+ G I+Y + G PF Q+ L I
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 236
Query: 234 MEGKYSFSSPEWNDISE-DPKDLIRKLLIVTPEDRYSVKEALNHSFF----HP 281
++ + P DI E D +D+++ L P+ R S+ E L H + HP
Sbjct: 237 IDPNHEIEFP---DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 286
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLD-------------DQMNVKLTDFGFARVLK 97
++RQ+ + H+H+ ++HRDLKP+NIL+ + + + ++DFG + L
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 98 KGEK-----LMDLCGTPGYLAPEVL-RANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
G+ L + GT G+ APE+L +N + +++D+++ G + Y +L G P
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 151 FWHRKQMVMLRNIMEGKYSF 170
F + NI+ G +S
Sbjct: 240 FGDKYSRE--SNIIRGIFSL 257
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 159 MLRNIMEGKYSFSSPEWN--DISGYLAPEVLR-ANMFEDATGYGQAVDVWACGVIMYTLL 215
+ + + G+ SF + N SG+ APE+L +N + +++D+++ G + Y +L
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 216 V-GCPPFWHRKQMVMLRNIMEGKYSFSSPEW---NDISEDPKDLIRKLLIVTPEDRYSVK 271
G PF + NI+ G +S + + + DLI +++ P R +
Sbjct: 234 SKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAM 291
Query: 272 EALNHSFFHPK 282
+ L H F PK
Sbjct: 292 KVLRHPLFWPK 302
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 53 RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM---DLCGTP 109
+ + EA+ +H H +VH DLKP N L+ D M +KL DFG A ++ + GT
Sbjct: 114 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 172
Query: 110 GYLAPEVLRANMFEDATG-----YGQAVDVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 163
Y+ PE ++ G DVW+ G I+Y + G PF Q+ L I
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 232
Query: 164 MEGKYSFSSPE 174
++ + P+
Sbjct: 233 IDPNHEIEFPD 243
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 203 DVWACGVIMYTLLVGCPPFWH-RKQMVMLRNIMEGKYSFSSPEWNDISE-DPKDLIRKLL 260
DVW+ G I+Y + G PF Q+ L I++ + P DI E D +D+++ L
Sbjct: 201 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---DIPEKDLQDVLKCCL 257
Query: 261 IVTPEDRYSVKEALNHSFF----HP 281
P+ R S+ E L H + HP
Sbjct: 258 KRDPKQRISIPELLAHPYVQIQTHP 282
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLD-------------DQMNVKLTDFGFARVLK 97
++RQ+ + H+H+ ++HRDLKP+NIL+ + + + ++DFG + L
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 98 KGE-----KLMDLCGTPGYLAPEVL-RANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
G+ L + GT G+ APE+L +N + +++D+++ G + Y +L G P
Sbjct: 180 SGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 151 FWHRKQMVMLRNIMEGKYSF 170
F + NI+ G +S
Sbjct: 240 FGDKYSRE--SNIIRGIFSL 257
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 179 SGYLAPEVLR-ANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEG 236
SG+ APE+L +N + +++D+++ G + Y +L G PF + NI+ G
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRG 253
Query: 237 KYSFSSPEW---NDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
+S + + + DLI +++ P R + + L H F PK
Sbjct: 254 IFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 302
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 92/237 (38%), Gaps = 52/237 (21%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-----KKGEKL 102
++ +M+ L L ++H + ++HRD+K N+L+ +KL DFG AR + +
Sbjct: 127 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
+ T Y PE+L YG +D+W G IM + P +M N
Sbjct: 187 XNRVVTLWYRPPELLLGE-----RDYGPPIDLWGAGCIMAEMWTRSP--------IMQGN 233
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 222
+ + + S I+ + P V ++E L+ G
Sbjct: 234 TEQHQLALISQLCGSITPEVWPNVDNYELYEK-----------------LELVKG----Q 272
Query: 223 HRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
RK L+ + Y+ DLI KLL++ P R +ALNH FF
Sbjct: 273 KRKVKDRLKAYVRDPYAL-------------DLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 92/237 (38%), Gaps = 52/237 (21%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-----KKGEKL 102
++ +M+ L L ++H + ++HRD+K N+L+ +KL DFG AR + +
Sbjct: 127 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
+ T Y PE+L YG +D+W G IM + P +M N
Sbjct: 187 XNRVVTLWYRPPELLLGE-----RDYGPPIDLWGAGCIMAEMWTRSP--------IMQGN 233
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 222
+ + + S I+ + P V ++E L+ G
Sbjct: 234 TEQHQLALISQLCGSITPEVWPNVDNYELYEK-----------------LELVKG----Q 272
Query: 223 HRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
RK L+ + Y+ DLI KLL++ P R +ALNH FF
Sbjct: 273 KRKVKDRLKAYVRDPYAL-------------DLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 92/237 (38%), Gaps = 52/237 (21%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-----KKGEKL 102
++ +M+ L L ++H + ++HRD+K N+L+ +KL DFG AR + +
Sbjct: 126 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 103 MDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
+ T Y PE+L YG +D+W G IM + P +M N
Sbjct: 186 XNRVVTLWYRPPELLLGE-----RDYGPPIDLWGAGCIMAEMWTRSP--------IMQGN 232
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 222
+ + + S I+ + P V ++E L+ G
Sbjct: 233 TEQHQLALISQLCGSITPEVWPNVDNYELYEK-----------------LELVKG----Q 271
Query: 223 HRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
RK L+ + Y+ DLI KLL++ P R +ALNH FF
Sbjct: 272 KRKVKDRLKAYVRDPYAL-------------DLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 22/135 (16%)
Query: 51 IMRQLFEALEHVHNHS--VVHRDLKPENILLDDQMNVKLTDFGFARVLKK---------- 98
I Q A++H+H ++HRDLK EN+LL +Q +KL DFG A +
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQR 200
Query: 99 ---GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155
E+ + TP Y PE++ +++ + G+ D+WA G I+Y L PF
Sbjct: 201 RALVEEEITRNTTPMYRTPEII--DLYSNFP-IGEKQDIWALGCILYLLCFRQHPFEDGA 257
Query: 156 QMVMLRNIMEGKYSF 170
++ I+ GKYS
Sbjct: 258 KL----RIVNGKYSI 268
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 176 NDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 235
N Y PE++ +++ + G+ D+WA G I+Y L PF ++ I+
Sbjct: 211 NTTPMYRTPEII--DLYSNFP-IGEKQDIWALGCILYLLCFRQHPFEDGAKL----RIVN 263
Query: 236 GKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNH 276
GKYS P + LIR +L V PE+R S+ E ++
Sbjct: 264 GKYSI--PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 15/130 (11%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLD-----DQMNVKLTDFGFARVLKKG----EK 101
+++Q L H+H+ ++VHRDLKP NIL+ ++ ++DFG + L G +
Sbjct: 123 LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR 182
Query: 102 LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVML 160
+ GT G++APE+L + E+ T VD+++ G + Y ++ G PF K +
Sbjct: 183 RSGVPGTEGWIAPEMLSEDCKENPT---YTVDIFSAGCVFYYVISEGSHPFG--KSLQRQ 237
Query: 161 RNIMEGKYSF 170
NI+ G S
Sbjct: 238 ANILLGACSL 247
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 159 MLRNIMEGKYSFSSPEW-NDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV- 216
+ + + G++SFS G++APE+L + E+ T VD+++ G + Y ++
Sbjct: 169 LCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPT---YTVDIFSAGCVFYYVISE 225
Query: 217 GCPPFWHRKQMVMLRNIMEGKYSFSS--PEWNDISED--PKDLIRKLLIVTPEDRYSVKE 272
G PF K + NI+ G S PE + ED ++LI K++ + P+ R S K
Sbjct: 226 GSHPFG--KSLQRQANILLGACSLDCLHPEKH---EDVIARELIEKMIAMDPQKRPSAKH 280
Query: 273 ALNHSFF 279
L H FF
Sbjct: 281 VLKHPFF 287
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 53 RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM---DLCGTP 109
+ + EA+ +H H +VH DLKP N L+ D M +KL DFG A ++ + G
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAV 220
Query: 110 GYLAPEVLRANMFEDATG-----YGQAVDVWACGVIMYTLLVGCPPFWH-RKQMVMLRNI 163
Y+ PE ++ G DVW+ G I+Y + G PF Q+ L I
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 164 MEGKYSFSSPE 174
++ + P+
Sbjct: 281 IDPNHEIEFPD 291
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 203 DVWACGVIMYTLLVGCPPFWH-RKQMVMLRNIMEGKYSFSSPEWNDISE-DPKDLIRKLL 260
DVW+ G I+Y + G PF Q+ L I++ + P DI E D +D+++ L
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---DIPEKDLQDVLKCCL 305
Query: 261 IVTPEDRYSVKEALNHSFF----HP 281
P+ R S+ E L H + HP
Sbjct: 306 KRDPKQRISIPELLAHPYVQIQTHP 330
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLD-------------DQMNVKLTDFGFARVLK 97
++RQ+ + H+H+ ++HRDLKP+NIL+ + + + ++DFG + L
Sbjct: 138 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 98 KGE-----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
G+ L + GT G+ APE+L + T +++D+++ G + Y +L G PF
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLT---RSIDIFSMGCVFYYILSKGKHPF 254
Query: 152 WHRKQMVMLRNIMEGKYSF 170
+ NI+ G +S
Sbjct: 255 GDKYSRE--SNIIRGIFSL 271
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 179 SGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEGK 237
SG+ APE+L + T +++D+++ G + Y +L G PF + NI+ G
Sbjct: 214 SGWRAPELLEESTKRRLT---RSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGI 268
Query: 238 YSFSSPEW---NDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
+S + + + DLI +++ P R + + L H F PK
Sbjct: 269 FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 316
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLD-------------DQMNVKLTDFGFARVLK 97
++RQ+ + H+H+ ++HRDLKP+NIL+ + + + ++DFG + L
Sbjct: 138 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 98 KGE-----KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
G+ L + GT G+ APE+L + T +++D+++ G + Y +L G PF
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLT---RSIDIFSMGCVFYYILSKGKHPF 254
Query: 152 WHRKQMVMLRNIMEGKYSF 170
+ NI+ G +S
Sbjct: 255 GDKYSRE--SNIIRGIFSL 271
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 179 SGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEGK 237
SG+ APE+L + T +++D+++ G + Y +L G PF + NI+ G
Sbjct: 214 SGWRAPELLEESTKRRLT---RSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGI 268
Query: 238 YSFSSPEW---NDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPK 282
+S + + + DLI +++ P R + + L H F PK
Sbjct: 269 FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 316
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNV-KLTDFGFARVLKKGEKLMDLCG 107
R Q+ A++H H+ VVHRD+K ENIL+D + KL DFG +L E D G
Sbjct: 142 RCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD-EPYTDFDG 200
Query: 108 TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVM 159
T Y PE + + + + VW+ G+++Y ++ G PF R Q ++
Sbjct: 201 TRVYSPPEWISRHQY-----HALPATVWSLGILLYDMVCGDIPF-ERDQEIL 246
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 26/129 (20%)
Query: 164 MEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 223
+G +S PEW Y + VW+ G+++Y ++ G PF
Sbjct: 198 FDGTRVYSPPEWISRHQY----------------HALPATVWSLGILLYDMVCGDIPF-E 240
Query: 224 RKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFHPKL 283
R Q I+E + F + +S D LIR+ L P R S++E L +
Sbjct: 241 RDQ-----EILEAELHFPA----HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291
Query: 284 FDQDIEPIK 292
D + P K
Sbjct: 292 EDVPLNPSK 300
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+RY + +L +AL++ H+ ++HRD+KP N+++D ++ ++L D+G A G++
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+ + PE+L D Y ++D+W+ G + ++ PF++
Sbjct: 187 ASRYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFY 228
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+RY + +L +AL++ H+ ++HRD+KP N+++D ++ ++L D+G A G++
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+ + PE+L D Y ++D+W+ G + ++ PF++
Sbjct: 188 ASRYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFY 229
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+RY + +L +AL++ H+ ++HRD+KP N+++D ++ ++L D+G A G++
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+ + PE+L D Y ++D+W+ G + ++ PF++
Sbjct: 187 ASRYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFY 228
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+RY + +L +AL++ H+ ++HRD+KP N+++D ++ ++L D+G A G++
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+ + PE+L D Y ++D+W+ G + ++ PF++
Sbjct: 188 ASRYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFY 229
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+RY + +L +AL++ H+ ++HRD+KP N+++D ++ ++L D+G A G++
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+ + PE+L D Y ++D+W+ G + ++ PF++
Sbjct: 187 ASRYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFY 228
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+RY + +L +AL++ H+ ++HRD+KP N+++D ++ ++L D+G A G++
Sbjct: 148 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 207
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+ + PE+L D Y ++D+W+ G + ++ PF++
Sbjct: 208 ASRYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFY 249
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+RY + +L +AL++ H+ ++HRD+KP N+++D ++ ++L D+G A G++
Sbjct: 129 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 188
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+ + PE+L D Y ++D+W+ G + ++ PF++
Sbjct: 189 ASRYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFY 230
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+RY + +L +AL++ H+ ++HRD+KP N+++D ++ ++L D+G A G++
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+ + PE+L D Y ++D+W+ G + ++ PF++
Sbjct: 187 ASRYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFY 228
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+RY + +L +AL++ H+ ++HRD+KP N+++D ++ ++L D+G A G++
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+ + PE+L D Y ++D+W+ G + ++ PF++
Sbjct: 187 ASRYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFY 228
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMDLC 106
+RY + +L +AL++ H+ ++HRD+KP N+++D ++ ++L D+G A G++
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWH 153
+ + PE+L D Y ++D+W+ G + ++ PF++
Sbjct: 187 ASRYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFY 228
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMD 104
L +Q+ E + ++H +HRDL N+LLD+ VK+ DFG A+ + +G ++ +
Sbjct: 136 LLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVRE 195
Query: 105 LCGTPGY-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
+P + APE L+ F A+ DVW+ GV +Y LL C
Sbjct: 196 DGDSPVFWYAPECLKEYKFYYAS------DVWSFGVTLYELLTHC 234
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ--MNVKLTDFGFARVLKKGEK 101
S P +R + + L+ +H + ++H DLKPENILL Q +K+ DFG + + ++
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQR 255
Query: 102 LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149
+ + Y APEV+ YG +D+W+ G I+ LL G P
Sbjct: 256 VYTXIQSRFYRAPEVIL------GARYGMPIDMWSLGCILAELLTGYP 297
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
Y APEV+ YG +D+W+ G I+ LL G P
Sbjct: 265 YRAPEVILG------ARYGMPIDMWSLGCILAELLTGYP 297
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 12/100 (12%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG--- 110
Q+ + +E++ + VHRDL NIL++ + +VK+ DFG A++L +K + PG
Sbjct: 119 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDXXVVREPGQSP 177
Query: 111 --YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
+ APE L N+F + DVW+ GV++Y L C
Sbjct: 178 IFWYAPESLSDNIFSRQS------DVWSFGVVLYELFTYC 211
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 218
+ APE L N+F + DVW+ GV++Y L C
Sbjct: 180 WYAPESLSDNIFSRQS------DVWSFGVVLYELFTYC 211
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ--MNVKLTDFGFARVLKKGEK 101
S P +R + + L+ +H + ++H DLKPENILL Q +K+ DFG + + ++
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQR 255
Query: 102 LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149
+ + Y APEV+ YG +D+W+ G I+ LL G P
Sbjct: 256 VYTXIQSRFYRAPEVIL------GARYGMPIDMWSLGCILAELLTGYP 297
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
Y APEV+ YG +D+W+ G I+ LL G P
Sbjct: 265 YRAPEVILG------ARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 26/137 (18%)
Query: 32 DKGEAAVQDIINSNP--ALR-YIMR-------------QLFEALEHVHNHSVVHRDLKPE 75
D+GE ++Q ++ P +LR Y+ R Q+ E + ++H+ +HR+L
Sbjct: 87 DQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAAR 146
Query: 76 NILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPGY-LAPEVLRANMFEDATGYGQA 131
N+LLD+ VK+ DFG A+ + +G ++ + +P + APE L+ F A+
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS----- 201
Query: 132 VDVWACGVIMYTLLVGC 148
DVW+ GV +Y LL C
Sbjct: 202 -DVWSFGVTLYELLTHC 217
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQ--MNVKLTDFGFARVLKKGEK 101
S P +R + + L+ +H + ++H DLKPENILL Q +K+ DFG + + ++
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQR 255
Query: 102 LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149
+ + Y APEV+ YG +D+W+ G I+ LL G P
Sbjct: 256 VYXXIQSRFYRAPEVIL------GARYGMPIDMWSLGCILAELLTGYP 297
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 219
Y APEV+ YG +D+W+ G I+ LL G P
Sbjct: 265 YRAPEVILG------ARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 95/251 (37%), Gaps = 56/251 (22%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
Q I+ S ++Y M + L +H VVHRDL P NILL D ++ + DF AR
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 99 GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
Y APE++ G+ + VD+W+ G +M + F
Sbjct: 187 DANKTHYVTHRWYRAPELVM-----QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241
Query: 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 218
L I+E +P+ D+ + +P A Y
Sbjct: 242 QLNKIVE---VVGTPKIEDVVMFSSPS---------ARDY-------------------- 269
Query: 219 PPFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEAL 274
LRN + + + W + + DP DLI K+L P+ R S ++AL
Sbjct: 270 -----------LRNSLS---NVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315
Query: 275 NHSFFHPKLFD 285
H +F LFD
Sbjct: 316 RHPYFE-SLFD 325
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 12/100 (12%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG--- 110
Q+ + +E++ + VHRDL NIL++ + +VK+ DFG A++L +K + PG
Sbjct: 122 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSP 180
Query: 111 --YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
+ APE L N+F + DVW+ GV++Y L C
Sbjct: 181 IFWYAPESLSDNIFSRQS------DVWSFGVVLYELFTYC 214
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 218
+ APE L N+F + DVW+ GV++Y L C
Sbjct: 183 WYAPESLSDNIFSRQS------DVWSFGVVLYELFTYC 214
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + + ++ + VHRDL N+L+D + K++DFG +RVL+ T G
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT-TGG 214
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIM 164
+ APE + F A+ DVW+ GV+M+ +L G P+W+ ++ ++
Sbjct: 215 KIPIRWTAPEAIAFRTFSSAS------DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE 268
Query: 165 EGKYSFSSP 173
EG Y +P
Sbjct: 269 EG-YRLPAP 276
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEGKYS 239
+ APE + F A+ DVW+ GV+M+ +L G P+W+ ++ ++ EG Y
Sbjct: 220 WTAPEAIAFRTFSSAS------DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YR 272
Query: 240 FSSP 243
+P
Sbjct: 273 LPAP 276
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 95/251 (37%), Gaps = 56/251 (22%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
Q I+ S ++Y M + L +H VVHRDL P NILL D ++ + DF AR
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 99 GEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
Y APE++ G+ + VD+W+ G +M + F
Sbjct: 187 DANKTHYVTHRWYRAPELVM-----QFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241
Query: 159 MLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 218
L I+E +P+ D+ + +P A Y
Sbjct: 242 QLNKIVE---VVGTPKIEDVVMFSSPS---------ARDY-------------------- 269
Query: 219 PPFWHRKQMVMLRNIMEGKYSFSSPEWNDI--SEDPK--DLIRKLLIVTPEDRYSVKEAL 274
LRN + + + W + + DP DLI K+L P+ R S ++AL
Sbjct: 270 -----------LRNSLS---NVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315
Query: 275 NHSFFHPKLFD 285
H +F LFD
Sbjct: 316 RHPYFE-SLFD 325
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 12/100 (12%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG--- 110
Q+ + +E++ + VHRDL NIL++ + +VK+ DFG A++L +K + PG
Sbjct: 135 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSP 193
Query: 111 --YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
+ APE L N+F + DVW+ GV++Y L C
Sbjct: 194 IFWYAPESLSDNIFSRQS------DVWSFGVVLYELFTYC 227
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 218
+ APE L N+F + DVW+ GV++Y L C
Sbjct: 196 WYAPESLSDNIFSRQS------DVWSFGVVLYELFTYC 227
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 12/100 (12%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG--- 110
Q+ + +E++ + VHRDL NIL++ + +VK+ DFG A++L +K + PG
Sbjct: 123 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSP 181
Query: 111 --YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
+ APE L N+F + DVW+ GV++Y L C
Sbjct: 182 IFWYAPESLSDNIFSRQS------DVWSFGVVLYELFTYC 215
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 218
+ APE L N+F + DVW+ GV++Y L C
Sbjct: 184 WYAPESLSDNIFSRQS------DVWSFGVVLYELFTYC 215
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + + ++ + VHRDL N+L+D + K++DFG +RVL+ + T G
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAYTTTGG 214
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIM 164
+ APE + F A+ DVW+ GV+M+ +L G P+W+ ++ ++
Sbjct: 215 KIPIRWTAPEAIAFRTFSSAS------DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE 268
Query: 165 EGKYSFSSP 173
EG Y +P
Sbjct: 269 EG-YRLPAP 276
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEGKYS 239
+ APE + F A+ DVW+ GV+M+ +L G P+W+ ++ ++ EG Y
Sbjct: 220 WTAPEAIAFRTFSSAS------DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YR 272
Query: 240 FSSP 243
+P
Sbjct: 273 LPAP 276
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 26/137 (18%)
Query: 32 DKGEAAVQDIINSNP--ALR-YIMR-------------QLFEALEHVHNHSVVHRDLKPE 75
D+GE ++Q ++ P +LR Y+ R Q+ E + ++H +HR+L
Sbjct: 87 DQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAAR 146
Query: 76 NILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPGY-LAPEVLRANMFEDATGYGQA 131
N+LLD+ VK+ DFG A+ + +G ++ + +P + APE L+ F A+
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS----- 201
Query: 132 VDVWACGVIMYTLLVGC 148
DVW+ GV +Y LL C
Sbjct: 202 -DVWSFGVTLYELLTHC 217
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 32 DKGEAAVQDIINSNP--ALR-YIMR-------------QLFEALEHVHNHSVVHRDLKPE 75
D+GE +VQ ++ P +LR Y+ R Q+ E + ++H +HR L
Sbjct: 82 DQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAAR 141
Query: 76 NILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPGY-LAPEVLRANMFEDATGYGQA 131
N+LLD+ VK+ DFG A+ + +G ++ + +P + APE L+ F A+
Sbjct: 142 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYAS----- 196
Query: 132 VDVWACGVIMYTLLVGC 148
DVW+ GV +Y LL C
Sbjct: 197 -DVWSFGVTLYELLTYC 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 50 YIMRQLFEALEHVHNHSVVHRDLKPENILL-DDQMNVKLTDFGFARVLKK---GEKLMD- 104
Y + Q E LE++H+ ++H D+K +N+LL D + L DFG A L+ G+ L+
Sbjct: 189 YYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 105 --LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
+ GT ++APEV+ + VDVW+ +M +L GC P+ R
Sbjct: 249 DYIPGTETHMAPEVVLGRSCD------AKVDVWSSCCMMLHMLNGCHPW-----TQFFRG 297
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRA 189
+ K + P +I AP +A
Sbjct: 298 PLCLKIASEPPPVREIPPSCAPLTAQA 324
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 32 DKGEAAVQDIINSNP--ALR-YIMR-------------QLFEALEHVHNHSVVHRDLKPE 75
D+GE +VQ ++ P +LR Y+ R Q+ E + ++H +HR L
Sbjct: 81 DQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAAR 140
Query: 76 NILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPGY-LAPEVLRANMFEDATGYGQA 131
N+LLD+ VK+ DFG A+ + +G ++ + +P + APE L+ F A+
Sbjct: 141 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYAS----- 195
Query: 132 VDVWACGVIMYTLLVGC 148
DVW+ GV +Y LL C
Sbjct: 196 -DVWSFGVTLYELLTYC 211
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG-EKLMDLCGTP 109
++R + ++++ N + VHRDL NIL++ + K++DFG +RVL+ E G
Sbjct: 152 MLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 110 ---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIME 165
+ APE + F A+ DVW+ G++M+ ++ G P+W +++ I +
Sbjct: 212 IPIRWTAPEAISYRKFTSAS------DVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND 265
Query: 166 G 166
G
Sbjct: 266 G 266
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEG 236
+ APE + F A+ DVW+ G++M+ ++ G P+W +++ I +G
Sbjct: 216 WTAPEAISYRKFTSAS------DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 266
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 61 HVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMD--LCGTPGYLAPEVLR 118
H N +VHRDLK N+L+D + VK+ DFG +R LK L GTP ++APEVLR
Sbjct: 154 HNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 119 ANMFEDATGYGQAVDVWACGVIMYTL 144
+ + DV++ GVI++ L
Sbjct: 213 DEPSNEKS------DVYSFGVILWEL 232
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 50 YIMRQLFEALEHVHNHSVVHRDLKPENILL-DDQMNVKLTDFGFARVLKK---GEKLMD- 104
Y + Q E LE++H+ ++H D+K +N+LL D + L DFG A L+ G+ L+
Sbjct: 170 YYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 105 --LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRN 162
+ GT ++APEV+ + VDVW+ +M +L GC P+ R
Sbjct: 230 DYIPGTETHMAPEVVLGRSCD------AKVDVWSSCCMMLHMLNGCHPWTQ-----FFRG 278
Query: 163 IMEGKYSFSSPEWNDISGYLAPEVLRA 189
+ K + P +I AP +A
Sbjct: 279 PLCLKIASEPPPVREIPPSCAPLTAQA 305
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 61 HVHNHSVVHRDLKPENILLDD-QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRA 119
H+ + +V HRD+KP N+L+++ +KL DFG A+ L E + + Y APE++
Sbjct: 146 HLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFG 205
Query: 120 NMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFS-------S 172
N Y AVD+W+ G I +++G P F L I+ S +
Sbjct: 206 NQH-----YTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLN 260
Query: 173 PEWNDISGYLAPEVLRANMFEDAT 196
P D+ Y + + +N+F D +
Sbjct: 261 PSHTDVDLYNSKGIPWSNVFSDHS 284
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 52/143 (36%), Gaps = 35/143 (24%)
Query: 167 KYSFSSPEWNDISG--YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHR 224
K S S P I Y APE++ N Y AVD+W+ G I +++G P F
Sbjct: 181 KLSPSEPNVAYICSRYYRAPELIFGNQH-----YTTAVDIWSVGCIFAEMMLGEPIFRGD 235
Query: 225 KQMVMLRNIME--------------------GKYSFSSPEWNDISEDPK--------DLI 256
L I+ Y+ W+++ D DL+
Sbjct: 236 NSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLL 295
Query: 257 RKLLIVTPEDRYSVKEALNHSFF 279
LL PE+R EAL H +F
Sbjct: 296 SALLQYLPEERMKPYEALCHPYF 318
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 22/133 (16%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK---------KGEK 101
++R + ++++ + S VHRDL NIL++ + K++DFG +RVL+ +G K
Sbjct: 136 MLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 195
Query: 102 LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVML 160
+ + APE + F A+ DVW+ G++M+ ++ G P+W ++
Sbjct: 196 I-----PIRWTAPEAIAYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMSNQDVI 244
Query: 161 RNIMEGKYSFSSP 173
+ I EG Y P
Sbjct: 245 KAIEEG-YRLPPP 256
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIMEGKYS 239
+ APE + F A+ DVW+ G++M+ ++ G P+W +++ I EG Y
Sbjct: 200 WTAPEAIAYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YR 252
Query: 240 FSSP 243
P
Sbjct: 253 LPPP 256
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 50 YIMRQLFEALEHVHNHSVVHRDLKPENILL-DDQMNVKLTDFGFARVLKK---GEKLMD- 104
Y + Q E LE++H ++H D+K +N+LL D L DFG A L+ G+ L+
Sbjct: 154 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 213
Query: 105 --LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ GT ++APEV+ + VD+W+ +M +L GC P+
Sbjct: 214 DYIPGTETHMAPEVVMGKPCD------AKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 50 YIMRQLFEALEHVHNHSVVHRDLKPENILL-DDQMNVKLTDFGFARVLKK---GEKLMD- 104
Y + Q E LE++H ++H D+K +N+LL D L DFG A L+ G+ L+
Sbjct: 170 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 229
Query: 105 --LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ GT ++APEV+ + VD+W+ +M +L GC P+
Sbjct: 230 DYIPGTETHMAPEVVMGKPCD------AKVDIWSSCCMMLHMLNGCHPW 272
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + + ++ + VHRDL NIL++ + K++DFG +RV++ + + T G
Sbjct: 150 MLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV-YTTTGG 208
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIM 164
+ APE ++ F A+ DVW+ G++M+ ++ G P+W +++ I
Sbjct: 209 KIPVRWTAPEAIQYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE 262
Query: 165 EGKYSFSSP 173
EG Y +P
Sbjct: 263 EG-YRLPAP 270
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIMEGKYS 239
+ APE ++ F A+ DVW+ G++M+ ++ G P+W +++ I EG Y
Sbjct: 214 WTAPEAIQYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YR 266
Query: 240 FSSP 243
+P
Sbjct: 267 LPAP 270
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 50 YIMRQLFEALEHVHNHSVVHRDLKPENILL-DDQMNVKLTDFGFARVLKK---GEKLMD- 104
Y + Q E LE++H ++H D+K +N+LL D L DFG A L+ G+ L+
Sbjct: 168 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 227
Query: 105 --LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ GT ++APEV+ + VD+W+ +M +L GC P+
Sbjct: 228 DYIPGTETHMAPEVVMGKPCD------AKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 22/133 (16%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK---------KGEK 101
++R + ++++ + S VHRDL NIL++ + K++DFG +RVL+ +G K
Sbjct: 115 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 102 LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVML 160
+ + APE + F A+ DVW+ G++M+ ++ G P+W ++
Sbjct: 175 I-----PIRWTAPEAIAYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMSNQDVI 223
Query: 161 RNIMEGKYSFSSP 173
+ I EG Y P
Sbjct: 224 KAIEEG-YRLPPP 235
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIMEGKYS 239
+ APE + F A+ DVW+ G++M+ ++ G P+W +++ I EG Y
Sbjct: 179 WTAPEAIAYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YR 231
Query: 240 FSSP 243
P
Sbjct: 232 LPPP 235
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGY 111
+R AL H+H+ +VH D+KP NI L + KL DFG L G P Y
Sbjct: 163 LRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRY 222
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
+APE+L+ + YG A DV++ G+ + L V C
Sbjct: 223 MAPELLQGS-------YGTAADVFSLGLTI--LEVAC 250
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 22/133 (16%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK---------KGEK 101
++R + ++++ + S VHRDL NIL++ + K++DFG +RVL+ +G K
Sbjct: 121 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 102 LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVML 160
+ + APE + F A+ DVW+ G++M+ ++ G P+W ++
Sbjct: 181 I-----PIRWTAPEAIAYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMSNQDVI 229
Query: 161 RNIMEGKYSFSSP 173
+ I EG Y P
Sbjct: 230 KAIEEG-YRLPPP 241
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIMEGKYS 239
+ APE + F A+ DVW+ G++M+ ++ G P+W +++ I EG Y
Sbjct: 185 WTAPEAIAYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YR 237
Query: 240 FSSP 243
P
Sbjct: 238 LPPP 241
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 50 YIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL---- 105
+I Q+ EA+E +H+ ++HRDLKP NI VK+ DFG + + E+ +
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 106 ---------CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145
GT Y++PE + N Y VD+++ G+I++ LL
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGN------SYSHKVDIFSLGLILFELL 224
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 50 YIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL---- 105
+I Q+ EA+E +H+ ++HRDLKP NI VK+ DFG + + E+ +
Sbjct: 168 HIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 227
Query: 106 ---------CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145
GT Y++PE + N Y VD+++ G+I++ LL
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGN------NYSHKVDIFSLGLILFELL 270
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124
H V+HRD+KP NILLD++ +KL DFG + L + G Y+APE + D
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDP---PD 200
Query: 125 AT--GYGQAVDVWACGVIMYTLLVGCPPFWHRK 155
T Y DVW+ G+ + L G P+ + K
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCK 233
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 22/133 (16%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK---------KGEK 101
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ +G K
Sbjct: 129 MLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 188
Query: 102 LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVML 160
+ + APE + F A+ DVW+ G++M+ ++ G P+W ++
Sbjct: 189 I-----PIRWTAPEAIAFRKFTSAS------DVWSYGIVMWEVVSYGERPYWEMTNQDVI 237
Query: 161 RNIMEGKYSFSSP 173
+ + EG Y SP
Sbjct: 238 KAVEEG-YRLPSP 249
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIMEGKYS 239
+ APE + F A+ DVW+ G++M+ ++ G P+W +++ + EG Y
Sbjct: 193 WTAPEAIAFRKFTSAS------DVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG-YR 245
Query: 240 FSSP 243
SP
Sbjct: 246 LPSP 249
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 101/260 (38%), Gaps = 53/260 (20%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
++ I+ L +H ++HRDLKP N LL+ +VK+ DFG AR + EK ++
Sbjct: 131 IKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI-NSEKDTNIVN 189
Query: 108 ------TPG------------------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYT 143
PG Y APE++ Y +++D+W+ G I
Sbjct: 190 DLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL-----QENYTKSIDIWSTGCIFAE 244
Query: 144 LLVGCPPFWHRKQMVMLRNIMEGKYSFS-SPEWNDISGYLAPEVLRANMFEDATGYGQAV 202
LL H + G F SP+ N + + N+ + G
Sbjct: 245 LLNMLQS--HINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTED 302
Query: 203 DVWACG---VIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKL 259
D+ VI Y L F HRK + + + ++ IS+D +L+ +
Sbjct: 303 DLKNINKPEVIKYIKL-----FPHRKPINLKQ------------KYPSISDDGINLLESM 345
Query: 260 LIVTPEDRYSVKEALNHSFF 279
L P R ++ +AL+H +
Sbjct: 346 LKFNPNKRITIDQALDHPYL 365
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124
H ++HRD+KP NIL++ + +KL DFG + L GT Y+APE L+
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMAPERLQ------ 186
Query: 125 ATGYGQAVDVWACGVIMYTLLVG----CPPFWHRKQMVMLRNIMEGK 167
T Y D+W+ G+ + L VG PP + + R +++G+
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGE 233
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 61 HVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM--DLCGTPGYLAPEVLR 118
H N +VHR+LK N+L+D + VK+ DFG +R LK L GTP ++APEVLR
Sbjct: 154 HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTPEWMAPEVLR 212
Query: 119 ANMFEDATGYGQAVDVWACGVIMYTL 144
+ + DV++ GVI++ L
Sbjct: 213 DEPSNEKS------DVYSFGVILWEL 232
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLC 106
A+ Y++ ++ AL ++H+ +V+ DLKPENI+L ++ +KL D G + + L
Sbjct: 184 AIAYLL-EILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLG---AVSRINSFGYLY 238
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCP 149
GTPG+ APE++R TG A D++ G + L + P
Sbjct: 239 GTPGFQAPEIVR-------TGPTVATDIYTVGRTLAALTLDLP 274
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 73/274 (26%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV------------ 95
++ ++ L +++VH+ ++HRDLKP N L++ +VK+ DFG AR
Sbjct: 158 IKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLP 217
Query: 96 LKKGEKLMDLCGTPG----------------YLAPEVLRANMFEDATGYGQAVDVWACGV 139
+ E M+L P Y APE++ + ++ Y +A+DVW+ G
Sbjct: 218 ISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELI---LLQE--NYTEAIDVWSIGC 272
Query: 140 IMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSS---PEWNDISGY-LAPEVLRANMFEDA 195
I LL N+++ ++ + P + S + L+P+ N F+
Sbjct: 273 IFAELL----------------NMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFH 316
Query: 196 T-GYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKY--SFSSPEWNDISE-- 250
T G ++V ++ +L G P + + L +Y F E D++E
Sbjct: 317 TRGNRDQLNV------IFNIL-GTPS---EEDIEALEKEDAKRYIRIFPKREGTDLAERF 366
Query: 251 -----DPKDLIRKLLIVTPEDRYSVKEALNHSFF 279
D L++++L+ P R ++ E L H FF
Sbjct: 367 PASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 99/263 (37%), Gaps = 77/263 (29%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD-------------------QMNVK 86
P +R++ QL AL +H + + H DLKPENIL + +++
Sbjct: 132 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIR 191
Query: 87 LTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ DFG A E + T Y PEV+ G+ Q DVW+ G I++
Sbjct: 192 VADFGSATF--DHEHHTTIVATRHYRPPEVIL------ELGWAQPCDVWSIGCILFEYYR 243
Query: 147 GCPPFW---HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMF-------EDAT 196
G F +R+ +VM+ I+ I ++ + F ++ +
Sbjct: 244 GFTLFQTHENREHLVMMEKIL-----------GPIPSHMIHRTRKQKYFYKGGLVWDENS 292
Query: 197 GYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLI 256
G+ V C P + ML++ +E F DL+
Sbjct: 293 SDGRYVK------------ENCKPL----KSYMLQDSLEHVQLF-------------DLM 323
Query: 257 RKLLIVTPEDRYSVKEALNHSFF 279
R++L P R ++ EAL H FF
Sbjct: 324 RRMLEFDPAQRITLAEALLHPFF 346
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 99/263 (37%), Gaps = 77/263 (29%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD-------------------QMNVK 86
P +R++ QL AL +H + + H DLKPENIL + +++
Sbjct: 155 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIR 214
Query: 87 LTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ DFG A E + T Y PEV+ G+ Q DVW+ G I++
Sbjct: 215 VADFGSATF--DHEHHTTIVATRHYRPPEVIL------ELGWAQPCDVWSIGCILFEYYR 266
Query: 147 GCPPFW---HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMF-------EDAT 196
G F +R+ +VM+ I+ I ++ + F ++ +
Sbjct: 267 GFTLFQTHENREHLVMMEKIL-----------GPIPSHMIHRTRKQKYFYKGGLVWDENS 315
Query: 197 GYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLI 256
G+ V C P + ML++ +E F DL+
Sbjct: 316 SDGRYVK------------ENCKPL----KSYMLQDSLEHVQLF-------------DLM 346
Query: 257 RKLLIVTPEDRYSVKEALNHSFF 279
R++L P R ++ EAL H FF
Sbjct: 347 RRMLEFDPAQRITLAEALLHPFF 369
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL-C 106
++ + QL + L H+ +V+HRDLKP+N+L++ +KL DFG AR +
Sbjct: 103 VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV 162
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152
T Y P+VL A Y ++D+W+ G I L P +
Sbjct: 163 VTLWYRPPDVLFG-----AKLYSTSIDMWSAGCIFAELANAARPLF 203
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 99/263 (37%), Gaps = 77/263 (29%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDD-------------------QMNVK 86
P +R++ QL AL +H + + H DLKPENIL + +++
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIR 182
Query: 87 LTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ DFG A E + T Y PEV+ G+ Q DVW+ G I++
Sbjct: 183 VADFGSATF--DHEHHTTIVATRHYRPPEVIL------ELGWAQPCDVWSIGCILFEYYR 234
Query: 147 GCPPFW---HRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMF-------EDAT 196
G F +R+ +VM+ I+ I ++ + F ++ +
Sbjct: 235 GFTLFQTHENREHLVMMEKIL-----------GPIPSHMIHRTRKQKYFYKGGLVWDENS 283
Query: 197 GYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLI 256
G+ V C P + ML++ +E F DL+
Sbjct: 284 SDGRYVK------------ENCKPL----KSYMLQDSLEHVQLF-------------DLM 314
Query: 257 RKLLIVTPEDRYSVKEALNHSFF 279
R++L P R ++ EAL H FF
Sbjct: 315 RRMLEFDPAQRITLAEALLHPFF 337
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG--- 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL + ++ + PG
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV-KEPGESP 180
Query: 111 --YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 181 IFWYAPESLTESKFSVAS------DVWSFGVVLYELFT 212
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 50/195 (25%)
Query: 12 VVVRVKEEGDDLKHLAAQVVD----KGEAAVQ---------DIINSNPAL-------RYI 51
V+ ++ E+ D K+L Q+ D G + D + N L R++
Sbjct: 83 VLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHM 142
Query: 52 MRQLFEALEHVHNHSVVHRDLKPENILL--------------DDQMNVKLT-----DFGF 92
QL +A++ +H++ + H DLKPENIL D+ +VK T DFG
Sbjct: 143 AFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGS 202
Query: 93 ARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFW 152
A E + T Y APEV+ G+ Q DVW+ G I++ VG F
Sbjct: 203 ATF--DHEHHSTIVSTRHYRAPEVIL------ELGWSQPCDVWSIGCIIFEYYVGFTLFQ 254
Query: 153 ---HRKQMVMLRNIM 164
+R+ + M+ I+
Sbjct: 255 THDNREHLAMMERIL 269
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124
H ++HRD+KP NIL++ + +KL DFG + L E + GT Y++PE L+
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-EMANEFVGTRSYMSPERLQ------ 179
Query: 125 ATGYGQAVDVWACGVIMYTLLVGCPP 150
T Y D+W+ G+ + + VG P
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 16/118 (13%)
Query: 44 SNPALRYIMRQLF-----EALEHVHNHS---VVHRDLKPENILLDDQMNVKLTDFGFARV 95
S P L + RQ L ++H+H ++HRD+K NILLD++ + DFG A++
Sbjct: 132 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 191
Query: 96 L--KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ K + GT G++APE L + T DV+ GV++ L+ G F
Sbjct: 192 MDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKT------DVFGYGVMLLELITGQRAF 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 127 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 186
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 187 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 129 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 188
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 189 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 185 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 153 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 212
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 213 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 243
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 185 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 182 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 128 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 187
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 188 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 185 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 182 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 200 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 120 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 180 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 200 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 121 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 180
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 181 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 211
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + + ++ S VHRDL NIL++ + K++DFG +R L++ + G
Sbjct: 121 MLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG 180
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ APE + F A+ D W+ G++M+ ++ G P+W ++ N
Sbjct: 181 GKIPIRWTAPEAIAFRKFTSAS------DAWSYGIVMWEVMSFGERPYWDMSNQDVI-NA 233
Query: 164 MEGKYSFSSP 173
+E Y P
Sbjct: 234 IEQDYRLPPP 243
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + VHRDL NIL++ + K++DFG ARVL+ + T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA--YTTRG 209
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ +PE + F A+ DVW+ G++++ ++ G P+W +++ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 164 MEG 166
EG
Sbjct: 264 DEG 266
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KKGEKLMDLCGTPG 110
Q+ + +E++ +HRDL NIL++++ VK+ DFG +VL K+ K+ + +P
Sbjct: 126 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 185
Query: 111 Y-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 186 FWYAPESLTESKFSVAS------DVWSFGVVLYELFT 216
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 132 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAG 190
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + ++
Sbjct: 191 AKFPIKWTAPESLAYNTFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYDL 243
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 244 LEKGYRMEQPE 254
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ + T G
Sbjct: 152 MLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRG 209
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ +PE + F A+ DVW+ G++++ ++ G P+W +++ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 164 MEG 166
EG
Sbjct: 264 DEG 266
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ + T G
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRG 180
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ +PE + F A+ DVW+ G++++ ++ G P+W +++ +
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
Query: 164 MEG 166
EG
Sbjct: 235 DEG 237
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 21/126 (16%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK---------KGEK 101
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ +G K
Sbjct: 140 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 102 LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVML 160
+ + +PE + F A+ DVW+ G++++ ++ G P+W ++
Sbjct: 200 I-----PIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVI 248
Query: 161 RNIMEG 166
+ + EG
Sbjct: 249 KAVDEG 254
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 21/126 (16%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLK---------KGEK 101
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ +G K
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 102 LMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVML 160
+ + +PE + F A+ DVW+ G++++ ++ G P+W ++
Sbjct: 183 I-----PIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
Query: 161 RNIMEG 166
+ + EG
Sbjct: 232 KAVDEG 237
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + + ++ S VHRDL NIL++ + K++DFG +R L++ + G
Sbjct: 123 MLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG 182
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ APE + F A+ D W+ G++M+ ++ G P+W ++ N
Sbjct: 183 GKIPIRWTAPEAIAFRKFTSAS------DAWSYGIVMWEVMSFGERPYWDMSNQDVI-NA 235
Query: 164 MEGKYSFSSP 173
+E Y P
Sbjct: 236 IEQDYRLPPP 245
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 167
Query: 104 DLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVM 159
G + APE L N F + DVWA GV+++ + G P+ +
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQ 220
Query: 160 LRNIMEGKYSFSSPE 174
+ ++E Y PE
Sbjct: 221 VYELLEKDYRMERPE 235
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 167
Query: 104 DLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVM 159
G + APE L N F + DVWA GV+++ + G P+ +
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQ 220
Query: 160 LRNIMEGKYSFSSPE 174
+ ++E Y PE
Sbjct: 221 VYELLEKDYRMERPE 235
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFT 165
Query: 104 DLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
G + APE L N F + DVWA GV+++ + G P+
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY 211
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ + T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRG 209
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ +PE + F A+ DVW+ G++++ ++ G P+W +++ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 164 MEG 166
EG
Sbjct: 264 DEG 266
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 167
Query: 104 DLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVM 159
G + APE L N F + DVWA GV+++ + G P+ +
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQ 220
Query: 160 LRNIMEGKYSFSSPE 174
+ ++E Y PE
Sbjct: 221 VYELLEKDYRMERPE 235
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ + T G
Sbjct: 150 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRG 207
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ +PE + F A+ DVW+ G++++ ++ G P+W +++ +
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 261
Query: 164 MEG 166
EG
Sbjct: 262 DEG 264
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ + T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRG 209
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ +PE + F A+ DVW+ G++++ ++ G P+W +++ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 164 MEG 166
EG
Sbjct: 264 DEG 266
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+
Sbjct: 114 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 172
Query: 104 DLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVM 159
G + APE L N F + DVWA GV+++ + G P+ +
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQ 225
Query: 160 LRNIMEGKYSFSSPE 174
+ ++E Y PE
Sbjct: 226 VYELLEKDYRMERPE 240
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 167
Query: 104 DLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVM 159
G + APE L N F + DVWA GV+++ + G P+ +
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQ 220
Query: 160 LRNIMEGKYSFSSPE 174
+ ++E Y PE
Sbjct: 221 VYELLEKDYRMERPE 235
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124
H ++HRD+KP NIL++ + +KL DFG + L GT Y++PE L+
Sbjct: 186 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQ------ 238
Query: 125 ATGYGQAVDVWACGVIMYTLLVG---CPPFWHRKQMVMLRNIMEG 166
T Y D+W+ G+ + + VG PP ++ +M +EG
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 283
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ + T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRG 209
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ +PE + F A+ DVW+ G++++ ++ G P+W +++ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 164 MEG 166
EG
Sbjct: 264 DEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ + T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRG 209
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ +PE + F A+ DVW+ G++++ ++ G P+W +++ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 164 MEG 166
EG
Sbjct: 264 DEG 266
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ + T G
Sbjct: 152 MLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRG 209
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ +PE + F A+ DVW+ G++++ ++ G P+W +++ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 164 MEG 166
EG
Sbjct: 264 DEG 266
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + + VHRDL NIL++ + K++DFG +R L+ G
Sbjct: 140 MLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 199
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ APE ++ F A+ DVW+ G++M+ ++ G P+W ++ N
Sbjct: 200 GKIPIRWTAPEAIQYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMTNQDVI-NA 252
Query: 164 MEGKYSFSSP 173
+E Y P
Sbjct: 253 IEQDYRLPPP 262
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIMEGKYS 239
+ APE ++ F A+ DVW+ G++M+ ++ G P+W ++ N +E Y
Sbjct: 206 WTAPEAIQYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAIEQDYR 258
Query: 240 FSSP 243
P
Sbjct: 259 LPPP 262
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + VHRDL NIL++ + K++DFG +RVL+ + T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRG 209
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ +PE + F A+ DVW+ G++++ ++ G P+W +++ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 164 MEG 166
EG
Sbjct: 264 DEG 266
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124
H ++HRD+KP NIL++ + +KL DFG + L GT Y++PE L+
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQ------ 195
Query: 125 ATGYGQAVDVWACGVIMYTLLVGCPPF 151
T Y D+W+ G+ + + VG P
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 114 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAG 172
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 225
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 226 LEKDYRMERPE 236
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 176
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 229
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 230 LEKDYRMERPE 240
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL-C 106
++ + QL + L H+ +V+HRDLKP+N+L++ +KL +FG AR +
Sbjct: 103 VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV 162
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
T Y P+VL A Y ++D+W+ G I L
Sbjct: 163 VTLWYRPPDVLFG-----AKLYSTSIDMWSAGCIFAEL 195
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 126 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 184
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 185 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 237
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 238 LEKDYRMERPE 248
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 114 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAG 172
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 225
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 226 LEKDYRMERPE 236
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 173
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 226
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 227 LEKDYRMERPE 237
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAG 173
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 226
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 227 LEKDYRMERPE 237
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124
H ++HRD+KP NIL++ + +KL DFG + L GT Y++PE L+
Sbjct: 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQ------ 203
Query: 125 ATGYGQAVDVWACGVIMYTLLVG---CPPFWHRKQMVMLRNIMEG 166
T Y D+W+ G+ + + VG PP ++ +M +EG
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 248
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 173
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 226
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 227 LEKDYRMERPE 237
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE--KLM 103
P +++ Q+ +E++ +H VVH+DL N+L+ D++NVK++D G R + + KL+
Sbjct: 128 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 104 DLCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
P ++APE + F + D+W+ GV+++ + G P+
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDS------DIWSYGVVLWEVFSYGLQPY 231
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 171
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 224
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 225 LEKDYRMERPE 235
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE--KLM 103
P +++ Q+ +E++ +H VVH+DL N+L+ D++NVK++D G R + + KL+
Sbjct: 145 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
Query: 104 DLCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
P ++APE + F + D+W+ GV+++ + G P+
Sbjct: 205 GNSLLPIRWMAPEAIMYGKFSIDS------DIWSYGVVLWEVFSYGLQPY 248
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 42 INSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KK 98
IN L+Y + Q+ + ++++ + VHRDL N+L++ + VK+ DFG + + K+
Sbjct: 123 INLKQQLKYAV-QICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181
Query: 99 GEKLMDLCGTPGY-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
+ D +P + APE L + F A+ DVW+ GV ++ LL C
Sbjct: 182 XXTVKDDRDSPVFWYAPECLMQSKFYIAS------DVWSFGVTLHELLTYC 226
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAG 176
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 229
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 230 LEKDYRMERPE 240
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 117 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 175
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 176 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 228
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 229 LEKDYRMERPE 239
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 176
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 229
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 230 LEKDYRMERPE 240
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
I+RQ+ AL+ H HRD+KPENIL+ L DFG A EKL L T G
Sbjct: 139 IVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTD-EKLTQLGNTVG 197
Query: 111 ---YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
Y APE F ++ +A D++A ++Y L G PP+
Sbjct: 198 TLYYXAPE-----RFSESHATYRA-DIYALTCVLYECLTGSPPY 235
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 171
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 224
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 225 LEKDYRMERPE 235
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + VHRDL NIL++ + K++DFG RVL+ + T G
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA--YTTRG 209
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ +PE + F A+ DVW+ G++++ ++ G P+W +++ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSAS------DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 164 MEG 166
EG
Sbjct: 264 DEG 266
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXT 165
Query: 104 DLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
G + APE L N F + DVWA GV+++ + G P+
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY 211
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 44 SNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM 103
S L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXT 165
Query: 104 DLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
G + APE L N F + DVWA GV+++ + G P+
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY 211
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124
H ++HRD+KP NIL++ + +KL DFG + L GT Y++PE L+
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQ------ 176
Query: 125 ATGYGQAVDVWACGVIMYTLLVG---CPPFWHRKQMVMLRNIMEG 166
T Y D+W+ G+ + + VG PP ++ +M +EG
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HRDL N L+ + VK+ DFG +R++ G+ G
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 176
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 177 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 229
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 230 LEKDYRMERPE 240
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124
H ++HRD+KP NIL++ + +KL DFG + L GT Y++PE L+
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQ------ 176
Query: 125 ATGYGQAVDVWACGVIMYTLLVG---CPPFWHRKQMVMLRNIMEG 166
T Y D+W+ G+ + + VG PP ++ +M +EG
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 16/118 (13%)
Query: 44 SNPALRYIMRQLF-----EALEHVHNHS---VVHRDLKPENILLDDQMNVKLTDFGFARV 95
S P L + RQ L ++H+H ++HRD+K NILLD++ + DFG A++
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Query: 96 L--KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
+ K + G G++APE L + T DV+ GV++ L+ G F
Sbjct: 184 MDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKT------DVFGYGVMLLELITGQRAF 235
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMD 104
P L Q+ E + ++ + +HRDL+ N+L+ + + K+ DFG ARV++ E +
Sbjct: 110 PKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 169
Query: 105 LCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRN 162
P + APE + F + DVW+ G+++Y ++ G P+ R ++
Sbjct: 170 GAKFPIKWTAPEAINFGCFTIKS------DVWSFGILLYEIVTYGKIPYPGRTNADVMTA 223
Query: 163 IMEG 166
+ +G
Sbjct: 224 LSQG 227
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 42 INSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL---KK 98
IN L+Y + Q+ + ++++ + VHRDL N+L++ + VK+ DFG + + K+
Sbjct: 111 INLKQQLKYAV-QICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 169
Query: 99 GEKLMDLCGTPGY-LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
+ D +P + APE L + F A+ DVW+ GV ++ LL C
Sbjct: 170 XXTVKDDRDSPVFWYAPECLMQSKFYIAS------DVWSFGVTLHELLTYC 214
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124
H ++HRD+KP NIL++ + +KL DFG + L GT Y++PE L+
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQ------ 176
Query: 125 ATGYGQAVDVWACGVIMYTLLVG---CPPFWHRKQMVMLRNIMEG 166
T Y D+W+ G+ + + VG PP ++ +M +EG
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124
H ++HRD+KP NIL++ + +KL DFG + L GT Y++PE L+
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQ------ 176
Query: 125 ATGYGQAVDVWACGVIMYTLLVG---CPPFWHRKQMVMLRNIMEG 166
T Y D+W+ G+ + + VG PP ++ +M +EG
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG--- 110
Q+ + +E++ +HR+L NIL++++ VK+ DFG +VL + ++ + PG
Sbjct: 123 QICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV-KEPGESP 181
Query: 111 --YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE L + F A+ DVW+ GV++Y L
Sbjct: 182 IFWYAPESLTESKFSVAS------DVWSFGVVLYELFT 213
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 65 HSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFED 124
H ++HRD+KP NIL++ + +KL DFG + L GT Y++PE L+
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQ------ 176
Query: 125 ATGYGQAVDVWACGVIMYTLLVG 147
T Y D+W+ G+ + + VG
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMD------LCGTPGY 111
L ++H +++HRD+K NILLD+ K+TDFG + KKG +L + GT GY
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS---KKGTELGQTHLXXVVKGTLGY 207
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 147
+ PE + + DV++ GV+++ +L
Sbjct: 208 IDPEYFIKGRLTEKS------DVYSFGVVLFEVLCA 237
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 98/254 (38%), Gaps = 63/254 (24%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILL---------------DDQM----NVKLT 88
+R + Q+ +++ +H++ + H DLKPENIL D++ ++K+
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 89 DFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG- 147
DFG A E L T Y APEV+ A G+ Q DVW+ G I+ +G
Sbjct: 180 DFGSATY--DDEHHSTLVSTRHYRAPEVIL------ALGWSQPCDVWSIGCILIEYYLGF 231
Query: 148 --CPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVW 205
P ++ + M+ I+ G + Y + L + A Y
Sbjct: 232 TVFPTHDSKEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSR---- 286
Query: 206 ACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPE 265
C P + ML +E + F DLI+K+L P
Sbjct: 287 -----------ACKPL----KEFMLSQDVEHERLF-------------DLIQKMLEYDPA 318
Query: 266 DRYSVKEALNHSFF 279
R +++EAL H FF
Sbjct: 319 KRITLREALKHPFF 332
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKL------MDLCGTPGY 111
L ++H +++HRD+K NILLD+ K+TDFG + KKG +L + GT GY
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS---KKGTELDQTHLXXVVKGTLGY 207
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 147
+ PE + + DV++ GV+++ +L
Sbjct: 208 IDPEYFIKGRLTEKS------DVYSFGVVLFEVLCA 237
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HR+L N L+ + VK+ DFG +R++ G+ G
Sbjct: 317 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 375
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 376 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 428
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 429 LEKDYRMERPE 439
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 66 SVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL-----CGTPGYLAPEVLRAN 120
++ HRD K N+L+ + + D G A + +G +D+ GT Y+APEVL
Sbjct: 133 AIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQ 192
Query: 121 MFEDATGYGQAVDVWACGVIMYTL 144
+ D + D+WA G++++ +
Sbjct: 193 IRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HR+L N L+ + VK+ DFG +R++ G+ G
Sbjct: 320 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 378
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 379 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 431
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 432 LEKDYRMERPE 442
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 63 HNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG---YLAPEVLRA 119
H S+ HRD K +N+LL + L DFG A + G+ D G G Y+APEVL
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEG 199
Query: 120 --NMFEDATGYGQAVDVWACGVIMYTLLVGC 148
N DA +D++A G++++ L+ C
Sbjct: 200 AINFQRDAF---LRIDMYAMGLVLWELVSRC 227
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT-- 108
+ + + EA+E++ + +HRDL N L++DQ VK++DFG +R + E+ +
Sbjct: 125 MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFP 184
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ PEVL + F + D+WA GV+M+ +
Sbjct: 185 VRWSPPEVLMYSKFSSKS------DIWAFGVLMWEI 214
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG 107
L Y+ Q+ A+E++ + +HR+L N L+ + VK+ DFG +R++ G+ G
Sbjct: 359 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAG 417
Query: 108 TP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNI 163
+ APE L N F + DVWA GV+++ + G P+ + + +
Sbjct: 418 AKFPIKWTAPESLAYNKFSIKS------DVWAFGVLLWEIATYGMSPY-PGIDLSQVYEL 470
Query: 164 MEGKYSFSSPE 174
+E Y PE
Sbjct: 471 LEKDYRMERPE 481
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 54/254 (21%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ +VHRDL N+L+ +VK+TDFG AR+L+
Sbjct: 111 KDNIGSQLLLNWCV-QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 169
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRK 155
EK + G ++A E + F + DVW+ GV ++ L+
Sbjct: 170 DEKEYNADGGKMPIKWMALECIHYRKFTHQS------DVWSYGVTIWELM---------- 213
Query: 156 QMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 215
+F ++ I P++L E Q C + +Y ++
Sbjct: 214 -------------TFGGKPYDGIPTREIPDLL-----EKGERLPQPP---ICTIDVYMVM 252
Query: 216 VGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALN 275
V C W M+ K+ + E++ ++ DP+ + L++ +DR + +
Sbjct: 253 VKC---W------MIDADSRPKFKELAAEFSRMARDPQ----RYLVIQGDDRMKLPSPND 299
Query: 276 HSFFHPKLFDQDIE 289
FF L ++D+E
Sbjct: 300 SKFFQNLLDEEDLE 313
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 10/112 (8%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF---ARVLKKG---EKL 102
R I +++ + + ++H ++H+DLK +N+ D+ V +TDFG + VL+ G +KL
Sbjct: 133 RQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKL 191
Query: 103 MDLCGTPGYLAPEVLRA---NMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
G +LAPE++R + ED + + DV+A G I Y L PF
Sbjct: 192 RIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG---YLAP 114
L+ H ++ HRD+K +N+LL + + + DFG A + G+ D G G Y+AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 115 EVLRA--NMFEDATGYGQAVDVWACGVIMYTLLVGC 148
EVL N DA +D++A G++++ L C
Sbjct: 203 EVLEGAINFQRDAF---LRIDMYAMGLVLWELASRC 235
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT-- 108
+ + + EA+E++ + +HRDL N L++DQ VK++DFG +R + E +
Sbjct: 125 MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 184
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ PEVL + F + D+WA GV+M+ +
Sbjct: 185 VRWSPPEVLMYSKFSSKS------DIWAFGVLMWEI 214
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 66 SVVHRDLKPENILLDD--QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFE 123
S++H DLKPENILL + + +K+ DFG + L G+++ + Y +PEVL
Sbjct: 179 SIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLL----- 231
Query: 124 DATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
Y A+D+W+ G I+ + G P F ++ + I+E
Sbjct: 232 -GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y +PEVL Y A+D+W+ G I+ + G P F ++ + I+E
Sbjct: 224 YRSPEVLLG------MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE---VL 274
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
P + + + PK RK P+ +++K+
Sbjct: 275 GIPPAHILDQAPK--ARKFFEKLPDGTWNLKKT 305
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 31/124 (25%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKG-------- 99
++ I+ L + +H ++HRDLKP N LL+ +VK+ DFG AR +
Sbjct: 133 VKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVND 192
Query: 100 ------------------EKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141
++L T Y APE++ Y ++D+W+ G I
Sbjct: 193 LEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL-----QENYTNSIDIWSTGCIF 247
Query: 142 YTLL 145
LL
Sbjct: 248 AELL 251
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT-- 108
+ + + EA+E++ + +HRDL N L++DQ VK++DFG +R + E +
Sbjct: 116 MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 175
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ PEVL + F + D+WA GV+M+ +
Sbjct: 176 VRWSPPEVLMYSKFSSKS------DIWAFGVLMWEI 205
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT-- 108
+ + + EA+E++ + +HRDL N L++DQ VK++DFG +R + E +
Sbjct: 109 MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 168
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ PEVL + F + D+WA GV+M+ +
Sbjct: 169 VRWSPPEVLMYSKFSSKS------DIWAFGVLMWEI 198
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 66 SVVHRDLKPENILLDD--QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFE 123
S++H DLKPENILL + + +K+ DFG + L G+++ + Y +PEVL
Sbjct: 160 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLL----- 212
Query: 124 DATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
Y A+D+W+ G I+ + G P F ++ + I+E
Sbjct: 213 -GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 253
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y +PEVL Y A+D+W+ G I+ + G P F ++ + I+E
Sbjct: 205 YRSPEVLLG------MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE---VL 255
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
P + + + PK RK P+ +++K+
Sbjct: 256 GIPPAHILDQAPK--ARKFFEKLPDGTWNLKKT 286
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMD 104
P L Q+ E + ++ + +HRDL+ N+L+ + + K+ DFG ARV++ E +
Sbjct: 109 PKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 168
Query: 105 LCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRN 162
P + APE + F + +VW+ G+++Y ++ G P+ R ++
Sbjct: 169 GAKFPIKWTAPEAINFGCFTIKS------NVWSFGILLYEIVTYGKIPYPGRTNADVMSA 222
Query: 163 IMEG 166
+ +G
Sbjct: 223 LSQG 226
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 45 NPALRYIMR---QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE- 100
NP ++ ++ Q+ +E++ VHRDL N +LD+ VK+ DFG AR + E
Sbjct: 120 NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179
Query: 101 ---KLMDLCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRK 155
+ P + A E L+ F + DVW+ GV+++ LL G PP+ H
Sbjct: 180 YSVQQHRHARLPVKWTALESLQTYRFTTKS------DVWSFGVLLWELLTRGAPPYRHID 233
Query: 156 QMVMLRNIMEGKYSFSSPEWNDISGY 181
+ + +G+ PE+ S Y
Sbjct: 234 PFDLTHFLAQGR-RLPQPEYCPDSLY 258
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 66 SVVHRDLKPENILLDD--QMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFE 123
S++H DLKPENILL + + +K+ DFG + L G+++ + Y +PEVL
Sbjct: 179 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLL----- 231
Query: 124 DATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
Y A+D+W+ G I+ + G P F ++ + I+E
Sbjct: 232 -GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSF 240
Y +PEVL Y A+D+W+ G I+ + G P F ++ + I+E
Sbjct: 224 YRSPEVLLG------MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE---VL 274
Query: 241 SSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEA 273
P + + + PK RK P+ +++K+
Sbjct: 275 GIPPAHILDQAPK--ARKFFEKLPDGTWNLKKT 305
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 42 INSNPALRYIMRQLFEALEHVH--------NHSVVHRDLKPENILLDDQMNVKLTDFGFA 93
+++ LR ++ + L H+H ++ HRDLK +NIL+ + D G A
Sbjct: 102 LDTVSCLRIVL-SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
Query: 94 RVLKKGEKLMDL-----CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ + +D+ GT Y+APEVL + D + VD+WA G++++
Sbjct: 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 212
Y+APEVL + D + VD+WA G++++
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT-- 108
+ + + EA+E++ + +HRDL N L++DQ VK++DFG +R + E +
Sbjct: 110 MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 169
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ PEVL + F + D+WA GV+M+ +
Sbjct: 170 VRWSPPEVLMYSKFSSKS------DIWAFGVLMWEI 199
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 42 INSNPALRYIMRQLFEALEHVH--------NHSVVHRDLKPENILLDDQMNVKLTDFGFA 93
+++ LR ++ + L H+H ++ HRDLK +NIL+ + D G A
Sbjct: 131 LDTVSCLRIVL-SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
Query: 94 RVLKKGEKLMDL-----CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ + +D+ GT Y+APEVL + D + VD+WA G++++
Sbjct: 190 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 243
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 212
Y+APEVL + D + VD+WA G++++
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 243
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 48 LRYIMRQLFEALEHVHNHS--VVHRDLKPENILLDDQM-NVKLTDFGFARVLKKGEKLMD 104
LR RQ+ + L+ +H + ++HRDLK +NI + +VK+ D G A LK+
Sbjct: 131 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKA 189
Query: 105 LCGTPGYLAPEVLRANMFEDATGYGQAVDVWACG 138
+ GTP + APE +E+ Y ++VDV+A G
Sbjct: 190 VIGTPEFXAPE-----XYEEK--YDESVDVYAFG 216
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 183 APEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMVML-RNIMEG--KYS 239
PE +E+ Y ++VDV+A G P+ + + R + G S
Sbjct: 193 TPEFXAPEXYEEK--YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPAS 250
Query: 240 FSSPEWNDISEDPKDLIRKLLIVTPEDRYSVKEALNHSFFH 280
F ++ E + IR+ ++RYS+K+ LNH+FF
Sbjct: 251 FDKVAIPEVKEIIEGCIRQ----NKDERYSIKDLLNHAFFQ 287
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 42 INSNPALRYIMRQLFEALEHVH--------NHSVVHRDLKPENILLDDQMNVKLTDFGFA 93
+++ LR ++ + L H+H ++ HRDLK +NIL+ + D G A
Sbjct: 102 LDTVSCLRIVL-SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
Query: 94 RVLKKGEKLMDL-----CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ + +D+ GT Y+APEVL + D + VD+WA G++++
Sbjct: 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 212
Y+APEVL + D + VD+WA G++++
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT-- 108
+ + + EA+E++ + +HRDL N L++DQ VK++DFG +R + E +
Sbjct: 105 MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP 164
Query: 109 PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ PEVL + F + D+WA GV+M+ +
Sbjct: 165 VRWSPPEVLMYSKFSSKS------DIWAFGVLMWEI 194
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++R + ++++ + + VHR L NIL++ + K++DFG +R L+ G
Sbjct: 114 MLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 173
Query: 111 ------YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNI 163
+ APE ++ F A+ DVW+ G++M+ ++ G P+W ++ N
Sbjct: 174 GKIPIRWTAPEAIQYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMTNQDVI-NA 226
Query: 164 MEGKYSFSSP 173
+E Y P
Sbjct: 227 IEQDYRLPPP 236
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 181 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIMEGKYS 239
+ APE ++ F A+ DVW+ G++M+ ++ G P+W ++ N +E Y
Sbjct: 180 WTAPEAIQYRKFTSAS------DVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAIEQDYR 232
Query: 240 FSSP 243
P
Sbjct: 233 LPPP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL----- 96
NP ++ ++ Q+ + ++++ + VHRDL N +LD++ VK+ DFG AR +
Sbjct: 147 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 206
Query: 97 -----KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
K G KL ++A E L+ F + DVW+ GV+++ L+ G PP
Sbjct: 207 YSVHNKTGAKL-----PVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPP 255
Query: 151 F 151
+
Sbjct: 256 Y 256
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT--PGY 111
QL AL ++ + VHRD+ N+L+ VKL DFG +R ++ G +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKW 178
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+APE + F A+ DVW GV M+ +L+ G PF
Sbjct: 179 MAPESINFRRFTSAS------DVWMFGVCMWEILMHGVKPF 213
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL----- 96
NP ++ ++ Q+ + ++++ + VHRDL N +LD++ VK+ DFG AR +
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEX 187
Query: 97 -----KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
K G KL ++A E L+ F + DVW+ GV+++ L+ G PP
Sbjct: 188 XSVHNKTGAKL-----PVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPP 236
Query: 151 F 151
+
Sbjct: 237 Y 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL----- 96
NP ++ ++ Q+ + ++++ + VHRDL N +LD++ VK+ DFG AR +
Sbjct: 121 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 180
Query: 97 -----KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
K G KL ++A E L+ F + DVW+ GV+++ L+ G PP
Sbjct: 181 YSVHNKTGAKL-----PVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPP 229
Query: 151 F 151
+
Sbjct: 230 Y 230
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL----- 96
NP ++ ++ Q+ + ++++ + VHRDL N +LD++ VK+ DFG AR +
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
Query: 97 -----KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
K G KL ++A E L+ F + DVW+ GV+++ L+ G PP
Sbjct: 189 YSVHNKTGAKL-----PVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPP 237
Query: 151 F 151
+
Sbjct: 238 Y 238
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT--PGY 111
QL AL ++ + VHRD+ N+L+ VKL DFG +R ++ G +
Sbjct: 499 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 558
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+APE + F A+ DVW GV M+ +L+ G PF
Sbjct: 559 MAPESINFRRFTSAS------DVWMFGVCMWEILMHGVKPF 593
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL----- 96
NP ++ ++ Q+ + ++++ + VHRDL N +LD++ VK+ DFG AR +
Sbjct: 148 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 207
Query: 97 -----KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
K G KL ++A E L+ F + DVW+ GV+++ L+ G PP
Sbjct: 208 YSVHNKTGAKL-----PVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPP 256
Query: 151 F 151
+
Sbjct: 257 Y 257
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT--PGY 111
QL AL ++ + VHRD+ N+L+ VKL DFG +R ++ G +
Sbjct: 122 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 181
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+APE + F A+ DVW GV M+ +L+ G PF
Sbjct: 182 MAPESINFRRFTSAS------DVWMFGVCMWEILMHGVKPF 216
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 25 HLAAQVVDKGEAAVQDIINSNP-----ALRYIMRQLFEALEHVHNHSVVHRDLKPENILL 79
H + + E ++ ++ NP ++ + QL + H+ +HRDLKP+N+LL
Sbjct: 106 HRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLL 165
Query: 80 -----DDQMNVKLTDFGFARVLK-KGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVD 133
+ +K+ DFG AR + T Y PE+L + Y +VD
Sbjct: 166 SVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRH-----YSTSVD 220
Query: 134 VWACGVIMYTLLVGCPPFWHRKQMVMLRNIME 165
+W+ I +L+ P F ++ L I E
Sbjct: 221 IWSIACIWAEMLMKTPLFPGDSEIDQLFKIFE 252
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL----- 96
NP ++ ++ Q+ + ++++ + VHRDL N +LD++ VK+ DFG AR +
Sbjct: 124 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183
Query: 97 -----KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
K G KL ++A E L+ F + DVW+ GV+++ L+ G PP
Sbjct: 184 YSVHNKTGAKL-----PVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPP 232
Query: 151 F 151
+
Sbjct: 233 Y 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL----- 96
NP ++ ++ Q+ + ++++ + VHRDL N +LD++ VK+ DFG AR +
Sbjct: 127 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 186
Query: 97 -----KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
K G KL ++A E L+ F + DVW+ GV+++ L+ G PP
Sbjct: 187 YSVHNKTGAKL-----PVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPP 235
Query: 151 F 151
+
Sbjct: 236 Y 236
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL----- 96
NP ++ ++ Q+ + ++++ + VHRDL N +LD++ VK+ DFG AR +
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
Query: 97 -----KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
K G KL ++A E L+ F + DVW+ GV+++ L+ G PP
Sbjct: 189 YSVHNKTGAKL-----PVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPP 237
Query: 151 F 151
+
Sbjct: 238 Y 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL----- 96
NP ++ ++ Q+ + ++++ + VHRDL N +LD++ VK+ DFG AR +
Sbjct: 126 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 185
Query: 97 -----KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
K G KL ++A E L+ F + DVW+ GV+++ L+ G PP
Sbjct: 186 YSVHNKTGAKL-----PVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPP 234
Query: 151 F 151
+
Sbjct: 235 Y 235
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT--PGY 111
QL AL ++ + VHRD+ N+L+ VKL DFG +R ++ G +
Sbjct: 124 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 183
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+APE + F A+ DVW GV M+ +L+ G PF
Sbjct: 184 MAPESINFRRFTSAS------DVWMFGVCMWEILMHGVKPF 218
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 25/121 (20%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL----- 96
NP ++ ++ Q+ + ++++ + VHRDL N +LD++ VK+ DFG AR +
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 187
Query: 97 -----KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPP 150
K G KL ++A E L+ F + DVW+ GV+++ L+ G PP
Sbjct: 188 YSVHNKTGAKL-----PVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPP 236
Query: 151 F 151
+
Sbjct: 237 Y 237
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT--PGY 111
QL AL ++ + VHRD+ N+L+ VKL DFG +R ++ G +
Sbjct: 147 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 206
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+APE + F A+ DVW GV M+ +L+ G PF
Sbjct: 207 MAPESINFRRFTSAS------DVWMFGVCMWEILMHGVKPF 241
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLM 103
+ + + EA+E++ + +HRDL N L++DQ VK++DFG +R + +G K
Sbjct: 110 MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKF- 168
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ PEVL + F + D+WA GV+M+ +
Sbjct: 169 ----PVRWSPPEVLMYSKFSSKS------DIWAFGVLMWEI 199
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT--PGY 111
QL AL ++ + VHRD+ N+L+ VKL DFG +R ++ G +
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 180
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+APE + F A+ DVW GV M+ +L+ G PF
Sbjct: 181 MAPESINFRRFTSAS------DVWMFGVCMWEILMHGVKPF 215
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT--PGY 111
QL AL ++ + VHRD+ N+L+ VKL DFG +R ++ G +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+APE + F A+ DVW GV M+ +L+ G PF
Sbjct: 179 MAPESINFRRFTSAS------DVWMFGVCMWEILMHGVKPF 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT--PGY 111
QL AL ++ + VHRD+ N+L+ VKL DFG +R ++ G +
Sbjct: 116 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 175
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+APE + F A+ DVW GV M+ +L+ G PF
Sbjct: 176 MAPESINFRRFTSAS------DVWMFGVCMWEILMHGVKPF 210
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT--PGY 111
QL AL ++ + VHRD+ N+L+ VKL DFG +R ++ G +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+APE + F A+ DVW GV M+ +L+ G PF
Sbjct: 179 MAPESINFRRFTSAS------DVWMFGVCMWEILMHGVKPF 213
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM-DLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW 176
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 177 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM-DLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 125 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 184
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 185 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM-DLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 182
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 183 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM-DLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 177 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 205
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 15/116 (12%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL--KKG 99
NP ++ ++ Q+ + ++ + + VHRDL N +LD++ VK+ DFG AR + K+
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 189
Query: 100 EKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+ + + G ++A E L+ F + DVW+ GV+++ L+ G PP+
Sbjct: 190 DSVHNKTGAKLPVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPPY 239
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM-DLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 126 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 185
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 186 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 214
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 15/116 (12%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL--KKG 99
NP ++ ++ Q+ + ++ + + VHRDL N +LD++ VK+ DFG AR + K+
Sbjct: 127 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 186
Query: 100 EKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+ + + G ++A E L+ F + DVW+ GV+++ L+ G PP+
Sbjct: 187 DSVHNKTGAKLPVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPPY 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 15/116 (12%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL--KKG 99
NP ++ ++ Q+ + ++ + + VHRDL N +LD++ VK+ DFG AR + K+
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 100 EKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+ + + G ++A E L+ F + DVW+ GV+++ L+ G PP+
Sbjct: 189 DSVHNKTGAKLPVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPPY 238
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 15/116 (12%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL--KKG 99
NP ++ ++ Q+ + ++ + + VHRDL N +LD++ VK+ DFG AR + K+
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEF 189
Query: 100 EKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+ + + G ++A E L+ F + DVW+ GV+++ L+ G PP+
Sbjct: 190 DSVHNKTGAKLPVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPPY 239
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 21/108 (19%)
Query: 53 RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARV-------------LKKG 99
+ + + ++H+ +++HRDL N L+ + NV + DFG AR+ LKK
Sbjct: 115 KDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKP 174
Query: 100 E--KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145
+ K + G P ++APE++ + Y + VDV++ G+++ ++
Sbjct: 175 DRKKRYTVVGNPYWMAPEMI------NGRSYDEKVDVFSFGIVLCEII 216
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTP---GYLAP 114
+E++ + + +HRDL N +L + M V + DFG +R + G+ C + +LA
Sbjct: 149 GMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208
Query: 115 EVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
E L N+ Y DVWA GV M+ ++ G P+
Sbjct: 209 ESLADNL------YTVHSDVWAFGVTMWEIMTRGQTPY 240
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 15/116 (12%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL--KKG 99
NP ++ ++ Q+ + ++ + + VHRDL N +LD++ VK+ DFG AR + K+
Sbjct: 188 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247
Query: 100 EKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+ + + G ++A E L+ F + DVW+ GV+++ L+ G PP+
Sbjct: 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPPY 297
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 15/116 (12%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL--KKG 99
NP ++ ++ Q+ + ++ + + VHRDL N +LD++ VK+ DFG AR + K+
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 100 EKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+ + + G ++A E L+ F + DVW+ GV+++ L+ G PP+
Sbjct: 189 DSVHNKTGAKLPVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPPY 238
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT--PGY 111
QL AL ++ + VHRD+ N+L+ VKL DFG +R ++ G +
Sbjct: 499 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 558
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+APE + F A+ DVW GV M+ +L+ G PF
Sbjct: 559 MAPESINFRRFTSAS------DVWMFGVCMWEILMHGVKPF 593
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 97/254 (38%), Gaps = 63/254 (24%)
Query: 48 LRYIMRQLFEALEHVHNHSVVHRDLKPENILL---------------DDQM----NVKLT 88
+R + Q+ +++ +H++ + H DLKPENIL D++ ++K+
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 89 DFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG- 147
DFG A E L Y APEV+ A G+ Q DVW+ G I+ +G
Sbjct: 180 DFGSATY--DDEHHSTLVXXRHYRAPEVIL------ALGWSQPCDVWSIGCILIEYYLGF 231
Query: 148 --CPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISGYLAPEVLRANMFEDATGYGQAVDVW 205
P ++ + M+ I+ G + Y + L + A Y
Sbjct: 232 TVFPTHDSKEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSR---- 286
Query: 206 ACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGKYSFSSPEWNDISEDPKDLIRKLLIVTPE 265
C P + ML +E + F DLI+K+L P
Sbjct: 287 -----------ACKPL----KEFMLSQDVEHERLF-------------DLIQKMLEYDPA 318
Query: 266 DRYSVKEALNHSFF 279
R +++EAL H FF
Sbjct: 319 KRITLREALKHPFF 332
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM-DLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 178
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 179 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 207
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 127 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 186
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 187 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 215
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 28 AQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKL 87
+VD + + ++ + L++ + + EA+E++ ++ VHRDL N+L+ + K+
Sbjct: 100 GSLVDYLRSRGRSVLGGDCLLKFSL-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 158
Query: 88 TDFGFARVLKKGEKLMDLCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+DFG K+ D P + APE LR F + DVW+ G++++ +
Sbjct: 159 SDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFSTKS------DVWSFGILLWEI 207
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 36/140 (25%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDD-------------------------QMNVKLT 88
++ +AL ++ S+ H DLKPENILLDD +KL
Sbjct: 145 EILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLI 204
Query: 89 DFGFARVLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGC 148
DFG A K + + T Y APEV+ N+ G+ + D+W+ G ++ L G
Sbjct: 205 DFGCATF--KSDYHGSIINTRQYRAPEVI-LNL-----GWDVSSDMWSFGCVLAELYTGS 256
Query: 149 PPFW---HRKQMVMLRNIME 165
F H + + M+ +I++
Sbjct: 257 LLFRTHEHMEHLAMMESIIQ 276
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM-DLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 177
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 178 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLM-DLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 177 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 205
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 15/116 (12%)
Query: 45 NPALRYIM---RQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL--KKG 99
NP ++ ++ Q+ + ++ + + VHRDL N +LD++ VK+ DFG AR + K+
Sbjct: 134 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 193
Query: 100 EKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+ + + G ++A E L+ F + DVW+ GV+++ L+ G PP+
Sbjct: 194 DSVHNKTGAKLPVKWMALESLQTQKFTTKS------DVWSFGVLLWELMTRGAPPY 243
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ +E + + +HRDL NILL + VK+ DFG AR ++KG+ + L
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPL- 265
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 266 ---KWMAPESIFDKI------YSTKSDVWSYGVLLWEIFSLGGSPY 302
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 182
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 183 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 122 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 181
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 182 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 210
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGT--PGY 111
QL AL ++ + VHRD+ N+L+ VKL DFG +R ++ G +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
+APE + F A+ DVW GV M+ +L+ G PF
Sbjct: 179 MAPESINFRRFTSAS------DVWMFGVCMWEILMHGVKPF 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 28 AQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKL 87
+VD + + ++ + L++ + + EA+E++ ++ VHRDL N+L+ + K+
Sbjct: 85 GSLVDYLRSRGRSVLGGDCLLKFSL-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 143
Query: 88 TDFGFARVLKKGEKLMDLCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+DFG K+ D P + APE LR F + DVW+ G++++ +
Sbjct: 144 SDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFSTKS------DVWSFGILLWEI 192
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 176
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 177 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 205
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 28 AQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKL 87
+VD + + ++ + L++ + + EA+E++ ++ VHRDL N+L+ + K+
Sbjct: 272 GSLVDYLRSRGRSVLGGDCLLKFSL-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 330
Query: 88 TDFGFARVLKKGEKLMDLCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+DFG K+ D P + APE LR F + DVW+ G++++ +
Sbjct: 331 SDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFSTKS------DVWSFGILLWEI 379
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ E + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 108 KDNIGSQYLLNWCV-QIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 166
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 167 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 217
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 28 AQVVDKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKL 87
+VD + + ++ + L++ + + EA+E++ ++ VHRDL N+L+ + K+
Sbjct: 91 GSLVDYLRSRGRSVLGGDCLLKFSL-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 149
Query: 88 TDFGFARVLKKGEKLMDLCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+DFG K+ D P + APE LR F + DVW+ G++++ +
Sbjct: 150 SDFGLT---KEASSTQDTGKLPVKWTAPEALREAAFSTKS------DVWSFGILLWEI 198
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTP-GY 111
Q+ E + + + +HRDL+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 112 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 171
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 172 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 200
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 21/128 (16%)
Query: 35 EAAVQDIINSNPALRYIMR---QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFG 91
E A +D+ L +++ Q+ + +E + + +HRDL NILL ++ VK+ DFG
Sbjct: 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 238
Query: 92 FAR-------VLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
AR ++KG+ + L ++APE + + Y DVW+ GV+++ +
Sbjct: 239 LARDIYKDPDYVRKGDARLPL----KWMAPETIFDRV------YTIQSDVWSFGVLLWEI 288
Query: 145 L-VGCPPF 151
+G P+
Sbjct: 289 FSLGASPY 296
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 21/128 (16%)
Query: 35 EAAVQDIINSNPALRYIMR---QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFG 91
E A +D+ L +++ Q+ + +E + + +HRDL NILL ++ VK+ DFG
Sbjct: 177 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 236
Query: 92 FAR-------VLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
AR ++KG+ + L ++APE + + Y DVW+ GV+++ +
Sbjct: 237 LARDIYKDPDYVRKGDARLPL----KWMAPETIFDRV------YTIQSDVWSFGVLLWEI 286
Query: 145 L-VGCPPF 151
+G P+
Sbjct: 287 FSLGASPY 294
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL- 205
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 206 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL- 205
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 206 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 21/128 (16%)
Query: 35 EAAVQDIINSNPALRYIMR---QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFG 91
E A +D+ L +++ Q+ + +E + + +HRDL NILL ++ VK+ DFG
Sbjct: 186 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 245
Query: 92 FAR-------VLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
AR ++KG+ + L ++APE + + Y DVW+ GV+++ +
Sbjct: 246 LARDIYKDPDYVRKGDARLPL----KWMAPETIFDRV------YTIQSDVWSFGVLLWEI 295
Query: 145 L-VGCPPF 151
+G P+
Sbjct: 296 FSLGASPY 303
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 21/128 (16%)
Query: 35 EAAVQDIINSNPALRYIMR---QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFG 91
E A +D+ L +++ Q+ + +E + + +HRDL NILL ++ VK+ DFG
Sbjct: 184 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 243
Query: 92 FAR-------VLKKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
AR ++KG+ + L ++APE + + Y DVW+ GV+++ +
Sbjct: 244 LARDIYKDPDYVRKGDARLPL----KWMAPETIFDRV------YTIQSDVWSFGVLLWEI 293
Query: 145 L-VGCPPF 151
+G P+
Sbjct: 294 FSLGASPY 301
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 19/130 (14%)
Query: 32 DKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFG 91
DKG +D I +++ + LE +H HRDLKP NILL D+ L D G
Sbjct: 126 DKGNFLTEDQI------LWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG 179
Query: 92 F---ARVLKKGEK----LMDLCG---TPGYLAPEVLRANMFEDATGYGQAVDVWACGVIM 141
A + +G + L D T Y APE+ + + DVW+ G ++
Sbjct: 180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSV---QSHCVIDERTDVWSLGCVL 236
Query: 142 YTLLVGCPPF 151
Y ++ G P+
Sbjct: 237 YAMMFGEGPY 246
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL- 205
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 206 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL- 205
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 206 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ +VHRDL N+L+ +VK+TDFG AR+L+
Sbjct: 134 KDNIGSQLLLNWCV-QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 192
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK + G ++A E + F + DVW+ GV ++ L+ G P+
Sbjct: 193 DEKEYNADGGKMPIKWMALECIHYRKFTHQS------DVWSYGVTIWELMTFGGKPY 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 193 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL- 251
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 252 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 288
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL- 214
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 215 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL- 214
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 215 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL- 214
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 215 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 158 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL- 216
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 217 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL- 214
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 215 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL- 214
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 215 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL- 210
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 211 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 57 EALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTP---GYLA 113
E + + +H +HRDL N L+D + VK++DFG R + + + + GT + A
Sbjct: 115 EGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV-GTKFPVKWSA 173
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLL 145
PEV + F+ Y DVWA G++M+ +
Sbjct: 174 PEVF--HYFK----YSSKSDVWAFGILMWEVF 199
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 18/106 (16%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFAR-------VLKKGEKLMDLC 106
Q+ + +E + + +HRDL NILL ++ VK+ DFG AR ++KG+ + L
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL- 210
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE + + Y DVW+ GV+++ + +G P+
Sbjct: 211 ---KWMAPETIFDRV------YTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMD 104
P L Q+ E + + + +HRDL+ NIL+ + K+ DFG ARV++ E +
Sbjct: 284 PKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343
Query: 105 LCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRN 162
P + APE + F + DVW+ G+++ ++ G P+ ++R
Sbjct: 344 GAKFPIKWTAPEAINFGSFTIKS------DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 397
Query: 163 IMEGKYSFSSPE 174
+ G Y PE
Sbjct: 398 LERG-YRMPRPE 408
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 111 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 111 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 121 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 179
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 180 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 230
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 112 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 114 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 111 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 113 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 117 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 175
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 176 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 136 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 194
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 195 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 245
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 118 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 118 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 118 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMDLCGTP-GY 111
Q+ E + + + +HR+L+ NIL+ D ++ K+ DFG AR+++ E + P +
Sbjct: 113 QIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 172
Query: 112 LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
APE + F + DVW+ G+++ ++
Sbjct: 173 TAPEAINYGTFTIKS------DVWSFGILLTEIVT 201
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 114 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 111 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 105 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 164 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 114 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE-KLMD 104
P L Q+ E + + + +HRDL+ NIL+ + K+ DFG ARV++ E +
Sbjct: 111 PKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 170
Query: 105 LCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRN 162
P + APE + F + DVW+ G+++ ++ G P+ ++R
Sbjct: 171 GAKFPIKWTAPEAINFGSFTIKS------DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 224
Query: 163 IMEGKYSFSSPE 174
+ G Y PE
Sbjct: 225 LERG-YRMPRPE 235
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 111 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 113 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 112 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 114 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 115 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 173
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 145 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 203
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 204 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 254
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 66 SVVHRDLKPENILLDDQMNVKLTDFGFA------RVLKKGEK---LMDLCGTPGYLAPEV 116
++ HRDL N+L+ + ++DFG + R+++ GE+ + GT Y+APEV
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEV 199
Query: 117 LRANM-FEDATGYGQAVDVWACGVIMYTLLVGC 148
L + D + VD++A G+I + + + C
Sbjct: 200 LEGAVNLRDXESALKQVDMYALGLIYWEIFMRC 232
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 57 EALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTP---GYLA 113
E + ++ SV+HRDL N L+ + +K++DFG R + ++ GT + +
Sbjct: 114 EGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWAS 172
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEG 166
PEV + Y DVW+ GV+M+ + G P+ +R ++ +I G
Sbjct: 173 PEVF------SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 17/124 (13%)
Query: 32 DKGEAAVQDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFG 91
++G QD++N + M Q+ + + ++ + +VHRDL N+L+ +VK+TDFG
Sbjct: 112 NRGRLGSQDLLN------WCM-QIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFG 164
Query: 92 FARVL--KKGEKLMDLCGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-G 147
AR+L + E D P ++A E + F + DVW+ GV ++ L+ G
Sbjct: 165 LARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQS------DVWSYGVTVWELMTFG 218
Query: 148 CPPF 151
P+
Sbjct: 219 AKPY 222
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++ Q+ ++++ + VHRDL N+LL Q K++DFG ++ L+ E T G
Sbjct: 474 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHG 532
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ APE + F + DVW+ GV+M+
Sbjct: 533 KWPVKWYAPECINYYKFSSKS------DVWSFGVLMW 563
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++ Q+ ++++ + VHRDL N+LL Q K++DFG ++ L+ E T G
Sbjct: 475 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHG 533
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ APE + F + DVW+ GV+M+
Sbjct: 534 KWPVKWYAPECINYYKFSSKS------DVWSFGVLMW 564
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++ Q+ ++++ + VHRDL N+LL Q K++DFG ++ L+ E T G
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHG 174
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ APE + F + DVW+ GV+M+
Sbjct: 175 KWPVKWYAPECINYYKFSSKS------DVWSFGVLMW 205
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++ Q+ ++++ + VHRDL N+LL Q K++DFG ++ L+ E T G
Sbjct: 112 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHG 170
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ APE + F + DVW+ GV+M+
Sbjct: 171 KWPVKWYAPECINYYKFSSKS------DVWSFGVLMW 201
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++ Q+ ++++ + VHRDL N+LL Q K++DFG ++ L+ E T G
Sbjct: 110 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHG 168
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ APE + F + DVW+ GV+M+
Sbjct: 169 KWPVKWYAPECINYYKFSSKS------DVWSFGVLMW 199
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++ Q+ ++++ + VHRDL N+LL Q K++DFG ++ L+ E T G
Sbjct: 122 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHG 180
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ APE + F + DVW+ GV+M+
Sbjct: 181 KWPVKWYAPECINYYKFSSKS------DVWSFGVLMW 211
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 51 IMRQLFEALEHVHNHS--VVHRDLKPENILL---DDQMNV--KLTDFGFARVLKKGEKLM 103
+M + +E++ N + +VHRDL+ NI L D+ V K+ DFG ++ + +
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVS 184
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
L G ++APE + A + Y + D ++ +I+YT+L G PF
Sbjct: 185 GLLGNFQWMAPETIGA----EEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++ Q+ ++++ + VHRDL N+LL Q K++DFG ++ L+ E T G
Sbjct: 130 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHG 188
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ APE + F + DVW+ GV+M+
Sbjct: 189 KWPVKWYAPECINYYKFSSKS------DVWSFGVLMW 219
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 72/142 (50%), Gaps = 21/142 (14%)
Query: 36 AAVQDIINSNPALRYIMR---QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGF 92
A + + + P+L +++ ++ + + +++ + VHRDL N ++ + VK+ DFG
Sbjct: 125 AMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM 184
Query: 93 ARVL-------KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL- 144
R + K G+ L+ + +++PE L+ +F T Y DVW+ GV+++ +
Sbjct: 185 TRDIYETDYYRKGGKGLLPV----RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIA 234
Query: 145 LVGCPPFWHRKQMVMLRNIMEG 166
+ P+ +LR +MEG
Sbjct: 235 TLAEQPYQGLSNEQVLRFVMEG 256
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++ Q+ ++++ + VHRDL N+LL Q K++DFG ++ L+ E T G
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHG 190
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ APE + F + DVW+ GV+M+
Sbjct: 191 KWPVKWYAPECINYYKFSSKS------DVWSFGVLMW 221
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++ Q+ ++++ + VHRDL N+LL Q K++DFG ++ L+ E T G
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHG 190
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ APE + F + DVW+ GV+M+
Sbjct: 191 KWPVKWYAPECINYYKFSSKS------DVWSFGVLMW 221
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ + VHRDL N ++ + VK+ DFG R + K G+ L+ +
Sbjct: 137 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 195
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL-LVGCPPFWHRKQMVMLRNIME 165
+++PE L+ +F T Y DVW+ GV+++ + + P+ +LR +ME
Sbjct: 196 ---RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 246
Query: 166 G 166
G
Sbjct: 247 G 247
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ + VHRDL N ++ + VK+ DFG R + K G+ L+ +
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV- 198
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL-LVGCPPFWHRKQMVMLRNIME 165
+++PE L+ +F T Y DVW+ GV+++ + + P+ +LR +ME
Sbjct: 199 ---RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 249
Query: 166 G 166
G
Sbjct: 250 G 250
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPG 110
++ Q+ ++++ + VHRDL N+LL Q K++DFG ++ L+ E T G
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK-AQTHG 174
Query: 111 -----YLAPEVLRANMFEDATGYGQAVDVWACGVIMY 142
+ APE + F + DVW+ GV+M+
Sbjct: 175 KWPVKWYAPECINYYKFSSKS------DVWSFGVLMW 205
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ + VHRDL N ++ + VK+ DFG R + K G+ L+ +
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 198
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL-LVGCPPFWHRKQMVMLRNIME 165
+++PE L+ +F T Y DVW+ GV+++ + + P+ +LR +ME
Sbjct: 199 ---RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 249
Query: 166 G 166
G
Sbjct: 250 G 250
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ + VHRDL N ++ + VK+ DFG R + K G+ L+ +
Sbjct: 136 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 194
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL-LVGCPPFWHRKQMVMLRNIME 165
+++PE L+ +F T Y DVW+ GV+++ + + P+ +LR +ME
Sbjct: 195 ---RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 245
Query: 166 G 166
G
Sbjct: 246 G 246
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ + VHRDL N ++ + VK+ DFG R + K G+ L+ +
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 204
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL-LVGCPPFWHRKQMVMLRNIME 165
+++PE L+ +F T Y DVW+ GV+++ + + P+ +LR +ME
Sbjct: 205 ---RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255
Query: 166 G 166
G
Sbjct: 256 G 256
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ + VHRDL N ++ + VK+ DFG R + K G+ L+ +
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 191
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL-LVGCPPFWHRKQMVMLRNIME 165
+++PE L+ +F T Y DVW+ GV+++ + + P+ +LR +ME
Sbjct: 192 ---RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 242
Query: 166 G 166
G
Sbjct: 243 G 243
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 113 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ + VHRDL N ++ + VK+ DFG R + K G+ L+ +
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 197
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL-LVGCPPFWHRKQMVMLRNIME 165
+++PE L+ +F T Y DVW+ GV+++ + + P+ +LR +ME
Sbjct: 198 ---RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
Query: 166 G 166
G
Sbjct: 249 G 249
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ + VHRDL N ++ + VK+ DFG R + K G+ L+ +
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 197
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL-LVGCPPFWHRKQMVMLRNIME 165
+++PE L+ +F T Y DVW+ GV+++ + + P+ +LR +ME
Sbjct: 198 ---RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
Query: 166 G 166
G
Sbjct: 249 G 249
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ + VHRDL N ++ + VK+ DFG R + K G+ L+ +
Sbjct: 131 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV- 189
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL-LVGCPPFWHRKQMVMLRNIME 165
+++PE L+ +F T Y DVW+ GV+++ + + P+ +LR +ME
Sbjct: 190 ---RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 240
Query: 166 G 166
G
Sbjct: 241 G 241
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 113 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + +K +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK 224
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 225 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCG---TPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + + +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVK 224
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 225 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 118 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 176
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK---GEKLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + +K +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK 224
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 225 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 111 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 169
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ + VHRDL N ++ + VK+ DFG R + K G+ L+ +
Sbjct: 168 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 226
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL-LVGCPPFWHRKQMVMLRNIME 165
+++PE L+ +F T Y DVW+ GV+++ + + P+ +LR +ME
Sbjct: 227 ---RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 277
Query: 166 G 166
G
Sbjct: 278 G 278
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 113 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 54 QLFEALEHVHN---HSVVHRDLKPENILLDDQMNV-KLTDFGFARVLKKGEKLMDLCGTP 109
Q + + ++H+ +++HRDLKP N+LL V K+ DFG A ++ + + G+
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT--HMTNNKGSA 168
Query: 110 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
++APEV + + Y + DV++ G+I++ ++ PF
Sbjct: 169 AWMAPEVF------EGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 39 QDIINSNPALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKK 98
+D I S L + + Q+ + + ++ + +VHRDL N+L+ +VK+TDFG A++L
Sbjct: 115 KDNIGSQYLLNWCV-QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 173
Query: 99 GEKLMDLCGTP---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPF 151
EK G ++A E + + Y DVW+ GV ++ L+ G P+
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRI------YTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 54 QLFEALEHVHN---HSVVHRDLKPENILLDDQMNV-KLTDFGFARVLKKGEKLMDLCGTP 109
Q + + ++H+ +++HRDLKP N+LL V K+ DFG A ++ + + G+
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT--HMTNNKGSA 167
Query: 110 GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
++APEV + + Y + DV++ G+I++ ++ PF
Sbjct: 168 AWMAPEVF------EGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDF-GFARVLKKGEKLMDL 105
A+ YI++ + +AL+++H+ VHR +K +IL+ V L+ ++ G++ +
Sbjct: 129 AIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV 188
Query: 106 CGTPGY-------LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
P Y L+PEVL+ N+ GY D+++ G+ L G PF
Sbjct: 189 HDFPKYSVKVLPWLSPEVLQQNL----QGYDAKSDIYSVGITACELANGHVPFKDMPATQ 244
Query: 159 MLRNIMEG 166
ML + G
Sbjct: 245 MLLEKLNG 252
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 47 ALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDF-GFARVLKKGEKLMDL 105
A+ YI++ + +AL+++H+ VHR +K +IL+ V L+ ++ G++ +
Sbjct: 113 AIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV 172
Query: 106 CGTPGY-------LAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPFWHRKQMV 158
P Y L+PEVL+ N+ GY D+++ G+ L G PF
Sbjct: 173 HDFPKYSVKVLPWLSPEVLQQNL----QGYDAKSDIYSVGITACELANGHVPFKDMPATQ 228
Query: 159 MLRNIMEG 166
ML + G
Sbjct: 229 MLLEKLNG 236
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + + K +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 225 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + + K +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 225 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + + K +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 225 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + + K +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 225 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 51 IMRQLFEALEHVHNHS--VVHRDLKPENILL---DDQMNV--KLTDFGFARVLKKGEKLM 103
+M + +E++ N + +VHRDL+ NI L D+ V K+ DFG ++ + +
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVS 184
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
L G ++APE + A + Y + D ++ +I+YT+L G PF
Sbjct: 185 GLLGNFQWMAPETIGA----EEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + + K +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 225 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + + K +
Sbjct: 157 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 216
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 217 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 16/130 (12%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P L Q+ E + + + +HRDL+ NIL+ + K+ DFG ARV G K
Sbjct: 278 PKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV---GAKF--- 331
Query: 106 CGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIM 164
+ APE + F + DVW+ G+++ ++ G P+ ++R +
Sbjct: 332 --PIKWTAPEAINFGSFTIKS------DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 383
Query: 165 EGKYSFSSPE 174
G Y PE
Sbjct: 384 RG-YRMPRPE 392
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + + K +
Sbjct: 152 QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 211
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 212 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + + K +
Sbjct: 211 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 270
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L F+ Y DVW+ GV+M+ + +G P+
Sbjct: 271 WMAPEAL----FDRV--YTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +K+ DFG AR + + K +
Sbjct: 154 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 213
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 214 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTP- 109
++ Q+ ++++ + VHRDL N+LL ++ K++DFG ++ L +
Sbjct: 115 LLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 110 ---GYLAPEVLRANMFEDATGYGQAVDVWACGVIMY-TLLVGCPPFWHRKQMVMLRNIME 165
+ APE + F + DVW+ GV M+ L G P+ K ++ I +
Sbjct: 175 WPLKWYAPECINFRKFSSRS------DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228
Query: 166 GKYSFSSPE 174
GK PE
Sbjct: 229 GKRMECPPE 237
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 57 EALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTP---GYLA 113
E + ++ V+HRDL N L+ + +K++DFG R + ++ GT + +
Sbjct: 117 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWAS 175
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEG 166
PEV + Y DVW+ GV+M+ + G P+ +R ++ +I G
Sbjct: 176 PEVF------SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 223
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 57 EALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTP---GYLA 113
E + ++ V+HRDL N L+ + +K++DFG R + ++ GT + +
Sbjct: 114 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWAS 172
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEG 166
PEV + Y DVW+ GV+M+ + G P+ +R ++ +I G
Sbjct: 173 PEVF------SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
Query: 48 LRYIMRQLFEALEHVHNH-SVVHRDLKPENILL------DDQMNVKLTDFGFARVLKKGE 100
++ I +QL L+++H ++H D+KPEN+L+ ++ + +K+ D G A E
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE 190
Query: 101 KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 147
+ T Y +PEVL +G D+W+ +++ L+ G
Sbjct: 191 HYTNSIQTREYRSPEVLL------GAPWGCGADIWSTACLIFELITG 231
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 57 EALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTP---GYLA 113
E + ++ V+HRDL N L+ + +K++DFG R + ++ GT + +
Sbjct: 115 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWAS 173
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEG 166
PEV + Y DVW+ GV+M+ + G P+ +R ++ +I G
Sbjct: 174 PEVF------SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 221
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
Query: 48 LRYIMRQLFEALEHVHNH-SVVHRDLKPENILL------DDQMNVKLTDFGFARVLKKGE 100
++ I +QL L+++H ++H D+KPEN+L+ ++ + +K+ D G A E
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE 190
Query: 101 KLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVG 147
+ T Y +PEVL +G D+W+ +++ L+ G
Sbjct: 191 HYTNSIQTREYRSPEVLL------GAPWGCGADIWSTACLIFELITG 231
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 57 EALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTP---GYLA 113
E + ++ V+HRDL N L+ + +K++DFG R + ++ GT + +
Sbjct: 112 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWAS 170
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEG 166
PEV + Y DVW+ GV+M+ + G P+ +R ++ +I G
Sbjct: 171 PEVF------SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 218
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ + VHRDL N + + VK+ DFG R + K G+ L+ +
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 191
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL-LVGCPPFWHRKQMVMLRNIME 165
+++PE L+ +F T Y DVW+ GV+++ + + P+ +LR +ME
Sbjct: 192 ---RWMSPESLKDGVF---TTYS---DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 242
Query: 166 G 166
G
Sbjct: 243 G 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE---KLMDLCGTPG 110
QL +E++ + +HRDL N+L+ + +++ DFG AR + + K +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPF 151
++APE L + Y DVW+ GV+M+ + +G P+
Sbjct: 225 WMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 57 EALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTP---GYLA 113
E + ++ V+HRDL N L+ + +K++DFG R + ++ GT + +
Sbjct: 134 EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWAS 192
Query: 114 PEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEG 166
PEV + Y DVW+ GV+M+ + G P+ +R ++ +I G
Sbjct: 193 PEVF------SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 240
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 51 IMRQLFEALEHVHNHS--VVHRDLKPENILL---DDQMNV--KLTDFGFARVLKKGEKLM 103
+M + +E++ N + +VHRDL+ NI L D+ V K+ DF ++ + +
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVS 184
Query: 104 DLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLVGCPPF 151
L G ++APE + A + Y + D ++ +I+YT+L G PF
Sbjct: 185 GLLGNFQWMAPETIGA----EEESYTEKADTYSFAMILYTILTGEGPF 228
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 21/90 (23%)
Query: 149 PPFWHR---KQMVMLRNIME--------GKYSFSSPEWNDISG------YLAPEVLRANM 191
PP HR + L+++ E +S S + +SG ++APE + A
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGA-- 200
Query: 192 FEDATGYGQAVDVWACGVIMYTLLVGCPPF 221
+ Y + D ++ +I+YT+L G PF
Sbjct: 201 --EEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P L + Q+ + +V + VHRDL+ NIL+ + + K+ DFG AR+++ E
Sbjct: 363 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 106 CGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
+ APE F + DVW+ G+++ L
Sbjct: 423 GAKFPIKWTAPEAALYGRFTIKS------DVWSFGILLTELTT 459
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK--LMDLCGTP-G 110
Q+ + + ++ H +VHR+L N+LL V++ DFG A +L +K L TP
Sbjct: 141 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEGKYS 169
++A E + Y DVW+ GV ++ L+ G P+ + + + +++E
Sbjct: 201 WMALESIHFGK------YTHQSDVWSYGVTVWELMTFGAEPYAGLR-LAEVPDLLEKGER 253
Query: 170 FSSPEWNDISGYL 182
+ P+ I Y+
Sbjct: 254 LAQPQICTIDVYM 266
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ VHRDL N ++ VK+ DFG R + K G+ L+ +
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 195
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIME 165
++APE L+ +F ++ D+W+ GV+++ + + P+ +L+ +M+
Sbjct: 196 ---RWMAPESLKDGVFTTSS------DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 246
Query: 166 GKY 168
G Y
Sbjct: 247 GGY 249
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P L + Q+ + +V + VHRDL+ NIL+ + + K+ DFG AR+++ E
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 173
Query: 106 CGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ APE F + DVW+ G+++ L
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKS------DVWSFGILLTEL 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P L + Q+ + +V + VHRDL+ NIL+ + + K+ DFG AR+++ E
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 106 CGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ APE F + DVW+ G+++ L
Sbjct: 340 GAKFPIKWTAPEAALYGRFTIKS------DVWSFGILLTEL 374
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P L + Q+ + +V + VHRDL+ NIL+ + + K+ DFG AR+++ E
Sbjct: 104 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 163
Query: 106 CGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ APE F + DVW+ G+++ L
Sbjct: 164 GAKFPIKWTAPEAALYGRFTIKS------DVWSFGILLTEL 198
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDL 105
RY + Q+ E + ++ + +HRDL N+LL + VK+ DFG R L + + + +
Sbjct: 119 RYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 106 CGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
P + APE L+ F A+ D W GV ++ +
Sbjct: 178 RKVPFAWCAPESLKTRTFSHAS------DTWMFGVTLWEMFT 213
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ VHRDL N ++ VK+ DFG R + K G+ L+ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV- 196
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIME 165
++APE L+ +F ++ D+W+ GV+++ + + P+ +L+ +M+
Sbjct: 197 ---RWMAPESLKDGVFTTSS------DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 166 GKY 168
G Y
Sbjct: 248 GGY 250
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P L + Q+ + +V + VHRDL+ NIL+ + + K+ DFG AR+++ E
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 106 CGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ APE F + DVW+ G+++ L
Sbjct: 340 GAKFPIKWTAPEAALYGRFTIKS------DVWSFGILLTEL 374
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P L + Q+ + +V + VHRDL+ NIL+ + + K+ DFG AR+++ E
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 106 CGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ APE F + DVW+ G+++ L
Sbjct: 340 GAKFPIKWTAPEAALYGRFTIKS------DVWSFGILLTEL 374
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ VHRDL N ++ VK+ DFG R + K G+ L+ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 196
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIME 165
++APE L+ +F ++ D+W+ GV+++ + + P+ +L+ +M+
Sbjct: 197 ---RWMAPESLKDGVFTTSS------DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 166 GKY 168
G Y
Sbjct: 248 GGY 250
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 46 PALRYIMR---QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL------ 96
P L+ +++ ++ + + +++ VHRDL N ++ VK+ DFG R +
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 183
Query: 97 -KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHR 154
K G+ L+ + ++APE L+ +F ++ D+W+ GV+++ + + P+
Sbjct: 184 RKGGKGLLPV----RWMAPESLKDGVFTTSS------DMWSFGVVLWEITSLAEQPYQGL 233
Query: 155 KQMVMLRNIMEGKY 168
+L+ +M+G Y
Sbjct: 234 SNEQVLKFVMDGGY 247
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 67/134 (50%), Gaps = 21/134 (15%)
Query: 46 PALRYIMR---QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL------ 96
P L+ +++ ++ + + +++ VHRDL N ++ VK+ DFG R +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 97 -KKGEKLMDLCGTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHR 154
K G+ L+ + ++APE L+ +F ++ D+W+ GV+++ + + P+
Sbjct: 187 RKGGKGLLPV----RWMAPESLKDGVFTTSS------DMWSFGVVLWEITSLAEQPYQGL 236
Query: 155 KQMVMLRNIMEGKY 168
+L+ +M+G Y
Sbjct: 237 SNEQVLKFVMDGGY 250
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDL 105
RY + Q+ E + ++ + +HRDL N+LL + VK+ DFG R L + + + +
Sbjct: 125 RYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 183
Query: 106 CGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
P + APE L+ F A+ D W GV ++ +
Sbjct: 184 RKVPFAWCAPESLKTRTFSHAS------DTWMFGVTLWEMFT 219
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVL-------KKGEKLMDLC 106
++ + + +++ VHRDL N ++ VK+ DFG R + K G+ L+ +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV- 196
Query: 107 GTPGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFWHRKQMVMLRNIME 165
++APE L+ +F ++ D+W+ GV+++ + + P+ +L+ +M+
Sbjct: 197 ---RWMAPESLKDGVFTTSS------DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 166 GKY 168
G Y
Sbjct: 248 GGY 250
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDL 105
RY + Q+ E + ++ + +HRDL N+LL + VK+ DFG R L + + + +
Sbjct: 125 RYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 183
Query: 106 CGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
P + APE L+ F A+ D W GV ++ +
Sbjct: 184 RKVPFAWCAPESLKTRTFSHAS------DTWMFGVTLWEMFT 219
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 54 QLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK--LMDLCGTP-G 110
Q+ + + ++ H +VHR+L N+LL V++ DFG A +L +K L TP
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 111 YLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV-GCPPFWHRKQMVMLRNIMEGKYS 169
++A E + Y DVW+ GV ++ L+ G P+ + + + +++E
Sbjct: 183 WMALESIHFGK------YTHQSDVWSYGVTVWELMTFGAEPYAGLR-LAEVPDLLEKGER 235
Query: 170 FSSPEWNDISGYL 182
+ P+ I Y+
Sbjct: 236 LAQPQICTIDVYM 248
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 51 IMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGE--KLMDLCGT 108
I RQ+ + ++ VHRDL N L+ + M VK+ DFG +R + + K
Sbjct: 179 IARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI 238
Query: 109 P-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLL-VGCPPFW 152
P ++ PE + N + + DVWA GV+++ + G P++
Sbjct: 239 PIRWMPPESIFYNRYTTES------DVWAYGVVLWEIFSYGLQPYY 278
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDL 105
RY + Q+ E + ++ + +HRDL N+LL + VK+ DFG R L + + + +
Sbjct: 119 RYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 106 CGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
P + APE L+ F A+ D W GV ++ +
Sbjct: 178 RKVPFAWCAPESLKTRTFSHAS------DTWMFGVTLWEMFT 213
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 58 ALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDLCGTPGYLAPEVL 117
+E++ N + +HRDL N +L D M V + DFG ++ + G+ G +A +
Sbjct: 159 GMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQ-----GRIAKMPV 213
Query: 118 RANMFEDATG--YGQAVDVWACGVIMYTLLV-GCPPF 151
+ E Y DVWA GV M+ + G P+
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY 250
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P L + Q+ + +V + VHRDL+ NIL+ + + K+ DFG AR+++ E
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 106 CGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ APE F + DVW+ G+++ L
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKS------DVWSFGILLTEL 208
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 49 RYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEK---LMDL 105
RY + Q+ E + ++ + +HRDL N+LL + VK+ DFG R L + + + +
Sbjct: 115 RYAV-QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 106 CGTP-GYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTLLV 146
P + APE L+ F A+ D W GV ++ +
Sbjct: 174 RKVPFAWCAPESLKTRTFSHAS------DTWMFGVTLWEMFT 209
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P L + Q+ + +V + VHRDL+ NIL+ + + K+ DFG AR+++ E
Sbjct: 105 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 164
Query: 106 CGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ APE F + DVW+ G+++ L
Sbjct: 165 GAKFPIKWTAPEAALYGRFTIKS------DVWSFGILLTEL 199
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 46 PALRYIMRQLFEALEHVHNHSVVHRDLKPENILLDDQMNVKLTDFGFARVLKKGEKLMDL 105
P L + Q+ + +V + VHRDL+ NIL+ + + K+ DFG AR+++ E
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 106 CGT--PGYLAPEVLRANMFEDATGYGQAVDVWACGVIMYTL 144
+ APE F + DVW+ G+++ L
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKS------DVWSFGILLTEL 208
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,952,576
Number of Sequences: 62578
Number of extensions: 556227
Number of successful extensions: 4898
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1410
Number of HSP's gapped (non-prelim): 2123
length of query: 408
length of database: 14,973,337
effective HSP length: 101
effective length of query: 307
effective length of database: 8,652,959
effective search space: 2656458413
effective search space used: 2656458413
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)